Your job contains 1 sequence.
>011462
MNNSRGRYPPGIGSGRGGVNASNPSFQSSRPQQQYVQRNFLQNHYHNQQFQQQQQQQQQQ
QWLRRNNFPGADSSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGN
EFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE
KIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVH
LLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFS
ATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQS
IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG
IDIQAVNVVINFDFPKNSETYLHRVCWIQLSFSLSLPNLQFMCSMLMYICFTDRLVDLEG
LDTLD
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011462
(485 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2127043 - symbol:RH8 "RNAhelicase-like 8" spec... 1903 1.6e-196 1
TAIR|locus:2098886 - symbol:AT3G61240 species:3702 "Arabi... 1808 1.9e-186 1
TAIR|locus:2050715 - symbol:AT2G45810 species:3702 "Arabi... 1767 4.2e-182 1
DICTYBASE|DDB_G0291804 - symbol:ddx6 "DEAD/DEAH box helic... 1466 3.3e-150 1
POMBASE|SPBC776.09 - symbol:ste13 "ATP-dependent RNA heli... 1438 3.1e-147 1
ASPGD|ASPL0000036135 - symbol:AN10417 species:162425 "Eme... 1428 3.5e-146 1
UNIPROTKB|A4R715 - symbol:DHH1 "ATP-dependent RNA helicas... 1418 4.0e-145 1
GENEDB_PFALCIPARUM|PFC0915w - symbol:PFC0915w "ATP-depend... 1413 1.4e-144 1
ZFIN|ZDB-GENE-030131-6611 - symbol:wu:fk48d07 "wu:fk48d07... 1376 1.1e-140 1
FB|FBgn0004419 - symbol:me31B "maternal expression at 31B... 1373 2.4e-140 1
UNIPROTKB|P54824 - symbol:ddx6 "ATP-dependent RNA helicas... 1350 1.3e-139 2
RGD|1564560 - symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box hel... 1355 1.9e-138 1
MGI|MGI:104976 - symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box ... 1352 4.0e-138 1
UNIPROTKB|F1SAJ5 - symbol:DDX6 "Uncharacterized protein" ... 1348 1.1e-137 1
UNIPROTKB|Q5ZKB9 - symbol:DDX6 "Probable ATP-dependent RN... 1346 1.7e-137 1
UNIPROTKB|E1BDM8 - symbol:DDX6 "Uncharacterized protein" ... 1344 2.8e-137 1
UNIPROTKB|E2RR01 - symbol:DDX6 "Uncharacterized protein" ... 1344 2.8e-137 1
UNIPROTKB|P26196 - symbol:DDX6 "Probable ATP-dependent RN... 1344 2.8e-137 1
UNIPROTKB|E1C8R1 - symbol:DDX6 "Probable ATP-dependent RN... 1341 5.8e-137 1
SGD|S000002319 - symbol:DHH1 "Cytoplasmic DExD/H-box heli... 1340 7.4e-137 1
CGD|CAL0006152 - symbol:DHH1 species:5476 "Candida albica... 1339 9.5e-137 1
UNIPROTKB|Q5AAW3 - symbol:DHH1 "ATP-dependent RNA helicas... 1339 9.5e-137 1
ZFIN|ZDB-GENE-070912-83 - symbol:ddx6 "DEAD (Asp-Glu-Ala-... 1336 2.0e-136 1
WB|WBGene00000479 - symbol:cgh-1 species:6239 "Caenorhabd... 1331 6.7e-136 1
UNIPROTKB|Q95YF3 - symbol:cgh-1 "ATP-dependent RNA helica... 1331 6.7e-136 1
WB|WBGene00002083 - symbol:inf-1 species:6239 "Caenorhabd... 694 2.1e-68 1
CGD|CAL0004095 - symbol:TIF species:5476 "Candida albican... 684 2.4e-67 1
UNIPROTKB|P87206 - symbol:TIF1 "ATP-dependent RNA helicas... 684 2.4e-67 1
POMBASE|SPAC1F5.10 - symbol:SPAC1F5.10 "ATP-dependent RNA... 678 1.1e-66 1
POMBASE|SPAC1006.07 - symbol:SPAC1006.07 "translation ini... 666 2.0e-65 1
ASPGD|ASPL0000037981 - symbol:AN2932 species:162425 "Emer... 660 8.5e-65 1
FB|FBgn0037573 - symbol:eIF4AIII "eIF4AIII" species:7227 ... 659 1.1e-64 1
UNIPROTKB|A4QVP2 - symbol:TIF1 "ATP-dependent RNA helicas... 658 1.4e-64 1
ASPGD|ASPL0000014018 - symbol:fal1 species:162425 "Emeric... 650 9.7e-64 1
TAIR|locus:2091191 - symbol:EIF4A-III "eukaryotic initiat... 649 1.2e-63 1
DICTYBASE|DDB_G0269192 - symbol:tifA "eukaryotic translat... 646 2.6e-63 1
ZFIN|ZDB-GENE-040426-915 - symbol:eif4a3 "eukaryotic tran... 644 4.2e-63 1
SGD|S000001767 - symbol:TIF1 "Translation initiation fact... 641 8.8e-63 1
SGD|S000003674 - symbol:TIF2 "Translation initiation fact... 641 8.8e-63 1
DICTYBASE|DDB_G0269146 - symbol:ifdA "eukaryotic translat... 636 3.0e-62 1
SGD|S000002428 - symbol:FAL1 "Nucleolar protein required ... 635 3.8e-62 1
UNIPROTKB|Q5ZM36 - symbol:EIF4A3 "Eukaryotic initiation f... 634 4.8e-62 1
UNIPROTKB|Q2NL22 - symbol:EIF4A3 "Eukaryotic initiation f... 634 4.8e-62 1
UNIPROTKB|E2RDZ4 - symbol:EIF4A3 "Uncharacterized protein... 634 4.8e-62 1
UNIPROTKB|P38919 - symbol:EIF4A3 "Eukaryotic initiation f... 634 4.8e-62 1
UNIPROTKB|A6M931 - symbol:EIF4A3 "Eukaryotic initiation f... 634 4.8e-62 1
RGD|1591139 - symbol:Eif4a3 "eukaryotic translation initi... 634 4.8e-62 1
WB|WBGene00022029 - symbol:Y65B4A.6 species:6239 "Caenorh... 634 4.8e-62 1
WB|WBGene00018007 - symbol:F33D11.10 species:6239 "Caenor... 633 6.2e-62 1
GENEDB_PFALCIPARUM|PFD1070w - symbol:PFD1070w "eukaryotic... 631 1.0e-61 1
UNIPROTKB|Q8IFN9 - symbol:PFD1070w "Eukaryotic initiation... 631 1.0e-61 1
CGD|CAL0001638 - symbol:FAL1 species:5476 "Candida albica... 629 1.6e-61 1
GENEDB_PFALCIPARUM|PF14_0655 - symbol:PF14_0655 "RNA heli... 628 2.1e-61 1
UNIPROTKB|Q8IKF0 - symbol:H45 "Helicase 45" species:36329... 628 2.1e-61 1
FB|FBgn0001942 - symbol:eIF-4a "Eukaryotic initiation fac... 626 3.4e-61 1
TAIR|locus:2088237 - symbol:EIF4A1 "eukaryotic translatio... 623 7.1e-61 1
TAIR|locus:2030285 - symbol:AT1G72730 species:3702 "Arabi... 619 1.9e-60 1
UNIPROTKB|Q3SZ54 - symbol:EIF4A1 "Eukaryotic initiation f... 617 3.1e-60 1
UNIPROTKB|J9NY67 - symbol:EIF4A1 "Uncharacterized protein... 617 3.1e-60 1
UNIPROTKB|P60842 - symbol:EIF4A1 "Eukaryotic initiation f... 617 3.1e-60 1
UNIPROTKB|A6M928 - symbol:EIF4A1 "Uncharacterized protein... 617 3.1e-60 1
MGI|MGI:95303 - symbol:Eif4a1 "eukaryotic translation ini... 617 3.1e-60 1
UNIPROTKB|Q6P3V8 - symbol:Eif4a1 "Protein Eif4a1" species... 617 3.1e-60 1
UNIPROTKB|Q8JFP1 - symbol:EIF4A2 "Eukaryotic initiation f... 616 3.9e-60 1
ZFIN|ZDB-GENE-031030-2 - symbol:eif4a1a "eukaryotic trans... 616 3.9e-60 1
TAIR|locus:2020078 - symbol:EIF4A-2 "eif4a-2" species:370... 615 5.0e-60 1
ZFIN|ZDB-GENE-040120-6 - symbol:eif4a1b "eukaryotic trans... 614 6.4e-60 1
ZFIN|ZDB-GENE-040426-2802 - symbol:eif4a2 "eukaryotic tra... 614 6.4e-60 1
UNIPROTKB|F1P895 - symbol:EIF4A1 "Uncharacterized protein... 613 8.1e-60 1
TAIR|locus:2008296 - symbol:AT1G51380 species:3702 "Arabi... 613 8.1e-60 1
DICTYBASE|DDB_G0269932 - symbol:uap56 "ATP-dependent RNA ... 611 1.3e-59 1
UNIPROTKB|I3LLD5 - symbol:I3LLD5 "Uncharacterized protein... 605 5.7e-59 1
WB|WBGene00001840 - symbol:hel-1 species:6239 "Caenorhabd... 604 7.3e-59 1
GENEDB_PFALCIPARUM|PFB0445c - symbol:PFB0445c "helicase, ... 426 8.8e-59 2
UNIPROTKB|Q9TY94 - symbol:UAP56 "DEAD box helicase, UAP56... 426 8.8e-59 2
UNIPROTKB|Q3SZ65 - symbol:EIF4A2 "Eukaryotic initiation f... 603 9.3e-59 1
UNIPROTKB|E2R3J1 - symbol:EIF4A2 "Uncharacterized protein... 603 9.3e-59 1
UNIPROTKB|Q14240 - symbol:EIF4A2 "Eukaryotic initiation f... 603 9.3e-59 1
UNIPROTKB|A6M930 - symbol:EIF4A2 "Eukaryotic translation ... 603 9.3e-59 1
UNIPROTKB|F1SCH3 - symbol:DDX39A "Uncharacterized protein... 603 9.3e-59 1
MGI|MGI:106906 - symbol:Eif4a2 "eukaryotic translation in... 603 9.3e-59 1
RGD|1309225 - symbol:Eif4a2 "eukaryotic translation initi... 603 9.3e-59 1
UNIPROTKB|F8WFX2 - symbol:Eif4a2 "Eukaryotic initiation f... 603 9.3e-59 1
MGI|MGI:1915528 - symbol:Ddx39 "DEAD (Asp-Glu-Ala-Asp) bo... 602 1.2e-58 1
UNIPROTKB|E2QY95 - symbol:DDX39A "Uncharacterized protein... 600 1.9e-58 1
UNIPROTKB|E7EQG2 - symbol:EIF4A2 "Eukaryotic initiation f... 600 1.9e-58 1
UNIPROTKB|O00148 - symbol:DDX39A "ATP-dependent RNA helic... 599 2.5e-58 1
RGD|619920 - symbol:Ddx39a "DEAD (Asp-Glu-Ala-Asp) box po... 599 2.5e-58 1
ZFIN|ZDB-GENE-040426-1259 - symbol:ddx39b "DEAD (Asp-Glu-... 598 3.2e-58 1
UNIPROTKB|Q5E970 - symbol:DDX39 "DEAD (Asp-Glu-Ala-Asp) b... 597 4.0e-58 1
UNIPROTKB|Q5WR10 - symbol:DDX39B "Spliceosome RNA helicas... 597 4.0e-58 1
UNIPROTKB|Q13838 - symbol:DDX39B "Spliceosome RNA helicas... 596 5.1e-58 1
UNIPROTKB|Q29024 - symbol:DDX39B "Spliceosome RNA helicas... 596 5.1e-58 1
MGI|MGI:99240 - symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box... 596 5.1e-58 1
RGD|70923 - symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box pol... 596 5.1e-58 1
ZFIN|ZDB-GENE-040426-2902 - symbol:ddx39ab "DEAD (Asp-Glu... 596 5.1e-58 1
UNIPROTKB|Q5STU3 - symbol:DDX39B "Spliceosome RNA helicas... 594 8.4e-58 1
TAIR|locus:2147987 - symbol:UAP56a "homolog of human UAP5... 593 1.1e-57 1
ZFIN|ZDB-GENE-030131-4275 - symbol:ddx39aa "DEAD (Asp-Glu... 593 1.1e-57 1
UNIPROTKB|Q3T147 - symbol:DDX39B "Spliceosome RNA helicas... 591 1.7e-57 1
WARNING: Descriptions of 830 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2127043 [details] [associations]
symbol:RH8 "RNAhelicase-like 8" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0016032 "viral reproduction" evidence=IMP] [GO:0019048
"virus-host interaction" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0019048 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 EMBL:AF058919 EMBL:AL161472
GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 OMA:QFMEKHL
ProtClustDB:CLSN2683443 EMBL:AJ010460 EMBL:AY080837 EMBL:AY113985
IPI:IPI00531108 PIR:T01230 PIR:T51741 RefSeq:NP_191975.2
RefSeq:NP_849535.1 UniGene:At.25593 UniGene:At.67100
UniGene:At.71300 ProteinModelPortal:Q8RXK6 SMR:Q8RXK6 STRING:Q8RXK6
PaxDb:Q8RXK6 PRIDE:Q8RXK6 EnsemblPlants:AT4G00660.1
EnsemblPlants:AT4G00660.2 GeneID:828042 KEGG:ath:AT4G00660
GeneFarm:919 TAIR:At4g00660 InParanoid:Q8RXK6 PhylomeDB:Q8RXK6
Genevestigator:Q8RXK6 GermOnline:AT4G00660 Uniprot:Q8RXK6
Length = 505
Score = 1903 (674.9 bits), Expect = 1.6e-196, P = 1.6e-196
Identities = 377/459 (82%), Positives = 398/459 (86%)
Query: 1 MNNSRGRYPPGIGSGRGGVNASNPSFQS-----SRPQQQYVQR-NFLQNHYHNXXXXXXX 54
MNN RGRYPPGIG+GRG N NP++QS P QYVQR N+ QNH
Sbjct: 1 MNN-RGRYPPGIGAGRGAFNP-NPNYQSRSGYQQHPPPQYVQRGNYAQNHQQQFQQAPSQ 58
Query: 55 ------XXXXXXXWLRRNNFPGADSS--IVDEVEKTVQSEAAVDPSSQDWKARLKIPPAD 106
WLRR PG +S+ V EVEKTVQSE +DP+S+DWKARLK+P D
Sbjct: 59 PHQYQQQQQQQQQWLRRGQIPGGNSNGDAVVEVEKTVQSEV-IDPNSEDWKARLKLPAPD 117
Query: 107 TRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKN 166
TRYRTEDVTATKGNEFEDYFLKRELLMGI+EKGFERPSPIQEESIPIALTG DILARAKN
Sbjct: 118 TRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKN 177
Query: 167 GTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGT 226
GTGKTAAFCIP LEKIDQDNNVIQ VI+VPTRELALQTSQVCKELGKHL IQVMVTTGGT
Sbjct: 178 GTGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGT 237
Query: 227 SLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQL 286
SLKDDIMRLYQPVHLLVGTPGRILDL+KKGVC+LKDCS+LVMDEADKLLS EFQPSVE L
Sbjct: 238 SLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHL 297
Query: 287 IRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVH 346
I FLP +RQILMFSATFPVTVKDFKD++L PYVINLMDELTLKGITQ+YAFVEERQK+H
Sbjct: 298 ISFLPESRQILMFSATFPVTVKDFKDRFLTNPYVINLMDELTLKGITQFYAFVEERQKIH 357
Query: 347 CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 406
CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG
Sbjct: 358 CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 417
Query: 407 ACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
ACRNLVCTDLFTRGIDIQAVNVVINFDFPKN+ETYLHRV
Sbjct: 418 ACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRV 456
>TAIR|locus:2098886 [details] [associations]
symbol:AT3G61240 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006417 GO:GO:0006397 GO:GO:0003723
EMBL:AL137898 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AJ010464 EMBL:AY120712 EMBL:BT000038 IPI:IPI00548726
PIR:T47916 PIR:T51743 RefSeq:NP_191683.1 RefSeq:NP_974472.1
UniGene:At.20236 ProteinModelPortal:Q9M2E0 SMR:Q9M2E0 STRING:Q9M2E0
PaxDb:Q9M2E0 PRIDE:Q9M2E0 EnsemblPlants:AT3G61240.1
EnsemblPlants:AT3G61240.2 GeneID:825296 KEGG:ath:AT3G61240
GeneFarm:928 TAIR:At3g61240 InParanoid:Q9M2E0 OMA:PLAMDQR
PhylomeDB:Q9M2E0 ProtClustDB:CLSN2683443 Genevestigator:Q9M2E0
GermOnline:AT3G61240 Uniprot:Q9M2E0
Length = 498
Score = 1808 (641.5 bits), Expect = 1.9e-186, P = 1.9e-186
Identities = 351/451 (77%), Positives = 388/451 (86%)
Query: 1 MNNSRGRYPPGIGSGRGGVNASNPSF-QSSR----PQ-QQYVQRNFLQNHYHNXXXXXXX 54
MN +RGRYPPG+G+GRG NP + QS R PQ QQYVQR + QN
Sbjct: 1 MNTNRGRYPPGVGTGRGA--PPNPDYHQSYRQQQPPQDQQYVQRGYSQNPQQMQLQQQHQ 58
Query: 55 XXXXXXXWLRRNNFPGADSSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDV 114
W RR PG S+ + V++T Q EA+ D + QDWKA L++PP DTRY+T DV
Sbjct: 59 QQQQQQQWSRRPQLPGNASNANEVVQQTTQPEASSDANGQDWKATLRLPPPDTRYQTADV 118
Query: 115 TATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAF 174
TATKGNEFEDYFLKR+LL GI+EKGFE+PSPIQEESIPIALTGSDILARAKNGTGKT AF
Sbjct: 119 TATKGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAF 178
Query: 175 CIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMR 234
CIP LEKID +NNVIQ +ILVPTRELALQTSQVCKEL K+LNIQVMVTTGGTSL+DDIMR
Sbjct: 179 CIPVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMR 238
Query: 235 LYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANR 294
L+QPVHLLVGTPGRILDL+KKGVC+LKDC+MLVMDEADKLLS EFQPS+E+LI+FLP NR
Sbjct: 239 LHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNR 298
Query: 295 QILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSK 354
Q LMFSATFPVTVK FKD++L+KPYVINLMD+LTL G+TQYYAFVEERQKVHCLNTLFSK
Sbjct: 299 QFLMFSATFPVTVKAFKDRHLRKPYVINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSK 358
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKM+QDHRNRVFH+FRNGACRNLVCT
Sbjct: 359 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCT 418
Query: 415 DLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
DLFTRGIDIQAVNVVINFDFP+ SE+YLHRV
Sbjct: 419 DLFTRGIDIQAVNVVINFDFPRTSESYLHRV 449
>TAIR|locus:2050715 [details] [associations]
symbol:AT2G45810 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006417 GO:GO:0006397
GO:GO:0003723 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC004665 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF ProtClustDB:CLSN2683443 EMBL:AY039862
EMBL:BT002709 EMBL:AJ010459 IPI:IPI00528597 PIR:T02466 PIR:T51740
RefSeq:NP_182105.1 UniGene:At.46 ProteinModelPortal:Q94BV4
SMR:Q94BV4 IntAct:Q94BV4 STRING:Q94BV4 PaxDb:Q94BV4 PRIDE:Q94BV4
EnsemblPlants:AT2G45810.1 GeneID:819189 KEGG:ath:AT2G45810
GeneFarm:917 TAIR:At2g45810 InParanoid:Q94BV4 PhylomeDB:Q94BV4
Genevestigator:Q94BV4 GermOnline:AT2G45810 Uniprot:Q94BV4
Length = 528
Score = 1767 (627.1 bits), Expect = 4.2e-182, P = 4.2e-182
Identities = 341/426 (80%), Positives = 372/426 (87%)
Query: 24 PSF-QSSRPQQQYVQRNF---LQNHYHNXXXXXXXXXXXXXXWLRRNNFPGADSSIVDEV 79
P + QS QQYVQR + +Q W RR PG D S +DEV
Sbjct: 55 PQYLQSQSDAQQYVQRGYPQQIQQQQQLQQQQQQQQQQQEQQWSRRAQLPG-DPSYIDEV 113
Query: 80 EKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKG 139
EKTVQSEA D +++DWKA LK+PP D RY+TEDVTATKGNEFEDYFLKR+LL GI+EKG
Sbjct: 114 EKTVQSEAISDSNNEDWKATLKLPPRDNRYQTEDVTATKGNEFEDYFLKRDLLRGIYEKG 173
Query: 140 FERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRE 199
FE+PSPIQEESIPIALTGSDILARAKNGTGKT AFCIP LEKID +NNVIQ VILVPTRE
Sbjct: 174 FEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPENNVIQAVILVPTRE 233
Query: 200 LALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCI 259
LALQTSQVCKEL K+L I+VMVTTGGTSL+DDIMRLYQPVHLLVGTPGRILDL+KKGVC+
Sbjct: 234 LALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPVHLLVGTPGRILDLAKKGVCV 293
Query: 260 LKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY 319
LKDC+MLVMDEADKLLS EFQPS+E+LI+FLP +RQILMFSATFPVTVK FKD+YL+KPY
Sbjct: 294 LKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQILMFSATFPVTVKSFKDRYLKKPY 353
Query: 320 VINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITE 379
+INLMD+LTL G+TQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITE
Sbjct: 354 IINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITE 413
Query: 380 LGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSE 439
LGYSCFYIHAKM+QDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFP+ SE
Sbjct: 414 LGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSE 473
Query: 440 TYLHRV 445
+YLHRV
Sbjct: 474 SYLHRV 479
>DICTYBASE|DDB_G0291804 [details] [associations]
symbol:ddx6 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0291804 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006397 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000185 RefSeq:XP_629938.1 HSSP:P39517
ProteinModelPortal:Q54E49 SMR:Q54E49 PRIDE:Q54E49
EnsemblProtists:DDB0234196 GeneID:8628344 KEGG:ddi:DDB_G0291804
OMA:QFMEKHL ProtClustDB:CLSZ2429504 Uniprot:Q54E49
Length = 423
Score = 1466 (521.1 bits), Expect = 3.3e-150, P = 3.3e-150
Identities = 276/351 (78%), Positives = 316/351 (90%)
Query: 95 DWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIA 154
+WK++LK+PP D R +TEDVTAT+GN+F+D LKR+LL GIFEKG+ +PSPIQE++IPIA
Sbjct: 24 NWKSQLKLPPRDERRQTEDVTATEGNDFDDLHLKRDLLRGIFEKGYVKPSPIQEKAIPIA 83
Query: 155 LTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKH 214
L G DI+ARAKNGTGKTA+F IPALEK D +VIQV+ILVPTRELALQTSQVCKELGK+
Sbjct: 84 LAGRDIMARAKNGTGKTASFLIPALEKTDPTKDVIQVLILVPTRELALQTSQVCKELGKY 143
Query: 215 LNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKL 274
+N+QVM +TGGTSLKDDIMRLY PVH+LV TPGR+LDL++K V L +C ++MDEADKL
Sbjct: 144 MNVQVMASTGGTSLKDDIMRLYNPVHILVATPGRVLDLAQKNVANLSNCHTMIMDEADKL 203
Query: 275 LSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQ 334
LS EFQP VEQLI FLP RQIL+FSATFPVTVK FK+ YLQ+ + INLM+ELTLKG+TQ
Sbjct: 204 LSQEFQPLVEQLINFLPQQRQILLFSATFPVTVKSFKEHYLQQAFEINLMEELTLKGVTQ 263
Query: 335 YYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQD 394
YYAFVEERQK+HCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCF+IHAKM+Q
Sbjct: 264 YYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFFIHAKMVQA 323
Query: 395 HRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
HRNRVFHDFRNGACRNLV +DLFTRGIDIQ VNVVINFDFPK+SETYLHR+
Sbjct: 324 HRNRVFHDFRNGACRNLVSSDLFTRGIDIQDVNVVINFDFPKHSETYLHRI 374
>POMBASE|SPBC776.09 [details] [associations]
symbol:ste13 "ATP-dependent RNA helicase Ste13"
species:4896 "Schizosaccharomyces pombe" [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0030996 "cell cycle arrest in response to
nitrogen starvation" evidence=IMP] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IMP] [GO:0051028
"mRNA transport" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBC776.09
GO:GO:0005524 GO:GO:0006417 EMBL:CU329671 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0031142 eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000290
OrthoDB:EOG4QJVWF EMBL:D29795 PIR:S46654 RefSeq:NP_596324.1
ProteinModelPortal:Q09181 SMR:Q09181 STRING:Q09181 PRIDE:Q09181
EnsemblFungi:SPBC776.09.1 GeneID:2541216 KEGG:spo:SPBC776.09
NextBio:20802328 GO:GO:0030996 Uniprot:Q09181
Length = 485
Score = 1438 (511.3 bits), Expect = 3.1e-147, P = 3.1e-147
Identities = 269/352 (76%), Positives = 308/352 (87%)
Query: 94 QDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPI 153
+ +K ++K P D R +TEDVT T+G EFEDY+LKRELLMGIFE GFERPSPIQEESIPI
Sbjct: 18 ESFKGQMKAQPVDMRPKTEDVTKTRGTEFEDYYLKRELLMGIFEAGFERPSPIQEESIPI 77
Query: 154 ALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGK 213
AL+G DILARAKNGTGKTAAF IP+LEK+D + IQ +ILVPTRELALQTSQVCK LGK
Sbjct: 78 ALSGRDILARAKNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTSQVCKTLGK 137
Query: 214 HLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADK 273
H+N++VMVTTGGT+L+DDI+RL VH++VGTPGR+LDL+ KGV +C+ VMDEADK
Sbjct: 138 HMNVKVMVTTGGTTLRDDIIRLNDTVHIVVGTPGRVLDLAGKGVADFSECTTFVMDEADK 197
Query: 274 LLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGIT 333
LLSPEF P +EQL+ + P NRQI ++SATFP+ VK+F DK+L KPY INLMDELTL+G+T
Sbjct: 198 LLSPEFTPIIEQLLSYFPKNRQISLYSATFPLIVKNFMDKHLNKPYEINLMDELTLRGVT 257
Query: 334 QYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQ 393
QYYAFV+E QKVHCLNTLFSKLQINQSIIFCNS NRVELLAKKITELGYSCFY HAKMLQ
Sbjct: 258 QYYAFVDESQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQ 317
Query: 394 DHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
HRNRVFH+FRNG CRNLVC+DL TRGIDIQAVNVVINFDFPKN+ETYLHR+
Sbjct: 318 SHRNRVFHNFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRI 369
>ASPGD|ASPL0000036135 [details] [associations]
symbol:AN10417 species:162425 "Emericella nidulans"
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0030996 "cell
cycle arrest in response to nitrogen starvation" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IEA]
[GO:0000290 "deadenylation-dependent decapping of
nuclear-transcribed mRNA" evidence=IEA] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:BN001306 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:HIDPARF
EnsemblFungi:CADANIAT00009573 Uniprot:C8VHA5
Length = 498
Score = 1428 (507.7 bits), Expect = 3.5e-146, P = 3.5e-146
Identities = 268/350 (76%), Positives = 304/350 (86%)
Query: 96 WKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIAL 155
WK +LK+P D R +TEDVTATKG EFED+++KREL+MGIFE GFE+PSPIQEE+IP+AL
Sbjct: 15 WKEQLKLPAKDGRPQTEDVTATKGLEFEDFYIKRELMMGIFEAGFEKPSPIQEETIPVAL 74
Query: 156 TGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL 215
TG DILARAKNGTGKTAAF IP LE+I+ + Q +ILVPTRELALQTS VCK LGKHL
Sbjct: 75 TGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHL 134
Query: 216 NIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLL 275
I VMVTTGGT L DDI+RL VH+LVGTPGR+LDL+ KGV L +C VMDEADKLL
Sbjct: 135 GINVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLL 194
Query: 276 SPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQY 335
SPEF P +EQL+ F P +RQ+++FSATFP+ VK FKD++++ PY INLMDELTL+GITQY
Sbjct: 195 SPEFTPVIEQLLSFHPKDRQVMLFSATFPMIVKSFKDRHMRNPYEINLMDELTLRGITQY 254
Query: 336 YAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDH 395
YAFVEE+QKVHCLNTLFSKLQINQSIIFCNS NRVELLAKKITELGYSCFY HA+MLQ H
Sbjct: 255 YAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQQH 314
Query: 396 RNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RNRVFHDFRNG CRNLVC+DL TRGIDIQAVNVVINFDFPKN+ETYLHR+
Sbjct: 315 RNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRI 364
>UNIPROTKB|A4R715 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001234 GO:GO:0008026 eggNOG:COG0513 KO:K12614
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_003716556.1
GeneID:2676879 KEGG:mgr:MGG_03388 OrthoDB:EOG4QJVWF Uniprot:A4R715
Length = 535
Score = 1418 (504.2 bits), Expect = 4.0e-145, P = 4.0e-145
Identities = 270/371 (72%), Positives = 313/371 (84%)
Query: 75 IVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMG 134
+ D++ S+A +++DW+ L IP D R +TEDVT TKG EFE++ LKR+LLMG
Sbjct: 5 LADQLRSATLSDAT---NNEDWRRNLNIPARDNRQQTEDVTNTKGLEFENFGLKRDLLMG 61
Query: 135 IFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVIL 194
IFE GFE+PSPIQEESIP+ALTG DILARAKNGTGKTAAF +PALE I+ + IQ +IL
Sbjct: 62 IFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVVPALETINPKVSKIQCLIL 121
Query: 195 VPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSK 254
VPTRELA+QTSQVCK LGKHL I VMVTTGGT+L+DDI+RL PVH++VGTPGRILDL+
Sbjct: 122 VPTRELAMQTSQVCKTLGKHLGINVMVTTGGTTLRDDILRLQDPVHIVVGTPGRILDLAG 181
Query: 255 KGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKY 314
K V L +C M +MDEADKLLS EF P +EQL++F P +RQ+++FSATFP++VK+F DK
Sbjct: 182 KNVADLSECPMFIMDEADKLLSIEFTPVIEQLLQFHPKDRQVMLFSATFPISVKEFSDKN 241
Query: 315 LQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLA 374
+ PY INLMDELTL+GITQYYAFVEE+QKVHCLNTLFSKLQINQSIIFCNS NRVELLA
Sbjct: 242 MTNPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLA 301
Query: 375 KKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDF 434
KKITELGYSCFY HAKM Q RNRVFHDFRNG CRNLVC+DL TRGIDIQAVNVVINFDF
Sbjct: 302 KKITELGYSCFYSHAKMQQQARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDF 361
Query: 435 PKNSETYLHRV 445
PKN+ETYLHR+
Sbjct: 362 PKNAETYLHRI 372
>GENEDB_PFALCIPARUM|PFC0915w [details] [associations]
symbol:PFC0915w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006200 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844502 HOGENOM:HOG000268797 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
ProtClustDB:CLSZ2429504 RefSeq:XP_001351278.1
ProteinModelPortal:O97285 SMR:O97285 EnsemblProtists:PFC0915w:mRNA
GeneID:814522 KEGG:pfa:PFC0915w EuPathDB:PlasmoDB:PF3D7_0320800
Uniprot:O97285
Length = 433
Score = 1413 (502.5 bits), Expect = 1.4e-144, P = 1.4e-144
Identities = 270/352 (76%), Positives = 306/352 (86%)
Query: 94 QDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPI 153
++WK ++ P D RY+TEDVT TKGNEFEDYFLKRELLMGIFEKG+E+PSPIQEESIP+
Sbjct: 34 EEWKKKILEPLKDLRYKTEDVTKTKGNEFEDYFLKRELLMGIFEKGYEKPSPIQEESIPV 93
Query: 154 ALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGK 213
AL G +ILARAKNGTGKTAAF IP LEK + N IQ +ILVPTRELALQTS + KELGK
Sbjct: 94 ALAGKNILARAKNGTGKTAAFAIPLLEKCNTHKNFIQGLILVPTRELALQTSAMIKELGK 153
Query: 214 HLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADK 273
H+ +Q MVTTGGTSL++DIMRLY VH+L GTPGRILDL+ K V L C ++VMDEADK
Sbjct: 154 HMKVQCMVTTGGTSLREDIMRLYNVVHILCGTPGRILDLANKDVANLSGCHIMVMDEADK 213
Query: 274 LLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGIT 333
LLSPEFQP VE+L++FLP +QILM+SATFPVTVK+F+ YL + INLMDELTLKGIT
Sbjct: 214 LLSPEFQPIVEELMKFLPKEKQILMYSATFPVTVKEFRAIYLSDAHEINLMDELTLKGIT 273
Query: 334 QYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQ 393
QYYAFV+ERQKVHCLNTLF+KLQINQ+IIFCNS+ RVELLAKKITELGYS FYIHA+M Q
Sbjct: 274 QYYAFVKERQKVHCLNTLFAKLQINQAIIFCNSITRVELLAKKITELGYSSFYIHARMSQ 333
Query: 394 DHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
HRNRVFHDFRNGACR LV +DLFTRGIDIQ+VNVVINFDFPKNSETYLHR+
Sbjct: 334 THRNRVFHDFRNGACRCLVSSDLFTRGIDIQSVNVVINFDFPKNSETYLHRI 385
>ZFIN|ZDB-GENE-030131-6611 [details] [associations]
symbol:wu:fk48d07 "wu:fk48d07" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-6611 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF EMBL:CR391937 IPI:IPI00901625
RefSeq:XP_001340860.1 UniGene:Dr.104819 UniGene:Dr.127773
Ensembl:ENSDART00000114495 GeneID:100007313 KEGG:dre:100007313
NextBio:20787456 Uniprot:E7F1G8
Length = 483
Score = 1376 (489.4 bits), Expect = 1.1e-140, P = 1.1e-140
Identities = 264/378 (69%), Positives = 309/378 (81%)
Query: 69 PGADSSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLK 128
P + ++ + ++ + DWK L++PP DTR RT DVTATKGNEFEDY LK
Sbjct: 37 PSGKTPVMPQKGSSIPQSSGGIRFGDDWKKCLQLPPKDTRVRTTDVTATKGNEFEDYCLK 96
Query: 129 RELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNV 188
RELLMGIFE G+E+PSPIQEESIPIAL+G DILARAKNGTGK+ A+ IP LE+ID +
Sbjct: 97 RELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDY 156
Query: 189 IQVVILVPTRELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPG 247
IQ ++LVPTRELALQ SQ+ + KHL I+VM TTGGT+L+DDIMRL + VH+++ TPG
Sbjct: 157 IQAIVLVPTRELALQVSQISINMSKHLGGIKVMATTGGTNLRDDIMRLDEIVHVIIATPG 216
Query: 248 RILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTV 307
RILDL KKGV + M VMDEADKLLS +F +E +I FLP RQIL++SATFP++V
Sbjct: 217 RILDLIKKGVAKVDKVQMAVMDEADKLLSQDFVVLIEDIISFLPKKRQILLYSATFPISV 276
Query: 308 KDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSV 367
+ F K+LQKPY INLMDELTLKGITQYYA+V ERQKVHCLNTLFS+LQINQSIIFCNS
Sbjct: 277 QKFMTKHLQKPYEINLMDELTLKGITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNST 336
Query: 368 NRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVN 427
RVELLAKKIT+LGYSCFYIHAKM+Q++RNRVFHDFRNG CRNLVCTDLFTRGIDIQAVN
Sbjct: 337 QRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVN 396
Query: 428 VVINFDFPKNSETYLHRV 445
VVINFDFPKN+ETYLHR+
Sbjct: 397 VVINFDFPKNAETYLHRI 414
>FB|FBgn0004419 [details] [associations]
symbol:me31B "maternal expression at 31B" species:7227
"Drosophila melanogaster" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IDA] [GO:0033962 "cytoplasmic mRNA
processing body assembly" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] [GO:0043186 "P granule" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005875 GO:GO:0007095 EMBL:AE014134 GO:GO:0003723
GO:GO:0000932 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033962 GO:GO:0004004 eggNOG:COG0513
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 EMBL:M59926 EMBL:AY051663
PIR:A39157 RefSeq:NP_523533.2 RefSeq:NP_723539.1 UniGene:Dm.2770
ProteinModelPortal:P23128 SMR:P23128 IntAct:P23128 MINT:MINT-769276
STRING:P23128 PaxDb:P23128 PRIDE:P23128 EnsemblMetazoa:FBtr0079975
GeneID:34364 KEGG:dme:Dmel_CG4916 CTD:34364 FlyBase:FBgn0004419
InParanoid:P23128 OrthoDB:EOG45QFVG PhylomeDB:P23128 ChiTaRS:me31B
GenomeRNAi:34364 NextBio:788139 Bgee:P23128 GermOnline:CG4916
Uniprot:P23128
Length = 459
Score = 1373 (488.4 bits), Expect = 2.4e-140, P = 2.4e-140
Identities = 255/350 (72%), Positives = 304/350 (86%)
Query: 96 WKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIAL 155
WK++LK+PP D R++T DVT T+GNEFE++ LKRELLMGIFEKG+ERPSPIQE +IPIAL
Sbjct: 34 WKSKLKLPPKDNRFKTTDVTDTRGNEFEEFCLKRELLMGIFEKGWERPSPIQEAAIPIAL 93
Query: 156 TGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL 215
+G D+LARAKNGTGKT A+CIP LE+ID + IQ +++VPTRELALQTSQ+C EL KHL
Sbjct: 94 SGKDVLARAKNGTGKTGAYCIPVLEQIDPTKDYIQALVMVPTRELALQTSQICIELAKHL 153
Query: 216 NIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLL 275
+I+VMVTTGGT LKDDI+R+YQ V L++ TPGRILDL K V + C +LV+DEADKLL
Sbjct: 154 DIRVMVTTGGTILKDDILRIYQKVQLIIATPGRILDLMDKKVADMSHCRILVLDEADKLL 213
Query: 276 SPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQY 335
S +FQ ++ +I LP + QIL+FSATFP+TVK+F +K+L++PY INLM+ELTLKG+TQY
Sbjct: 214 SLDFQGMLDHVILKLPKDPQILLFSATFPLTVKNFMEKHLREPYEINLMEELTLKGVTQY 273
Query: 336 YAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDH 395
YAFV+ERQKVHCLNTLFSKLQINQSIIFCNS RVELLAKKITELGY C+YIHAKM Q H
Sbjct: 274 YAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAH 333
Query: 396 RNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RNRVFHDFR G CRNLVC+DLFTRGID+QAVNVVINFDFP+ +ETYLHR+
Sbjct: 334 RNRVFHDFRQGLCRNLVCSDLFTRGIDVQAVNVVINFDFPRMAETYLHRI 383
>UNIPROTKB|P54824 [details] [associations]
symbol:ddx6 "ATP-dependent RNA helicase ddx6" species:8355
"Xenopus laevis" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003723
GO:GO:0030529 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG106685 CTD:1656 EMBL:X92421 EMBL:BC170228 EMBL:BC170230
RefSeq:NP_001083721.1 UniGene:Xl.157 IntAct:P54824 PRIDE:P54824
GeneID:399080 KEGG:xla:399080 Xenbase:XB-GENE-922237 Uniprot:P54824
Length = 481
Score = 1350 (480.3 bits), Expect = 1.3e-139, Sum P(2) = 1.3e-139
Identities = 257/374 (68%), Positives = 308/374 (82%)
Query: 73 SSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELL 132
S+I ++ QS +++ DWK LK+PP D R +T DVT+TKGNEFEDY LKRELL
Sbjct: 48 STINSGSQQQAQSMSSIIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELL 107
Query: 133 MGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVV 192
MGIFE G+E+PSPIQEESIPIAL+G DILARAKNGTGK+ A+ IP LE++D + IQ +
Sbjct: 108 MGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDCIQAM 167
Query: 193 ILVPTRELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 251
++VPTRELALQ SQ+C ++ KH+ +VM TTGGT+L+DDIMRL VH+++ TPGRILD
Sbjct: 168 VIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILD 227
Query: 252 LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFK 311
L KKGV + M+V+DEADKLLS +F +E +I LP NRQIL++SATFP++V+ F
Sbjct: 228 LIKKGVAKVDHIQMIVLDEADKLLSQDFMQIMEDIIMTLPKNRQILLYSATFPLSVQKFM 287
Query: 312 DKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVE 371
+LQKPY INLM+ELTLKG+TQYYA+V ERQKVHCLNTLFS+LQINQSIIFCNS RVE
Sbjct: 288 TLHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVE 347
Query: 372 LLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVIN 431
LLAKKI++LGYSCFYIHAKM Q+HRNRVFHDFRNG CRNLVCTDLFTRGIDIQAVNVVIN
Sbjct: 348 LLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVIN 407
Query: 432 FDFPKNSETYLHRV 445
FDFPK +ETYLHR+
Sbjct: 408 FDFPKLAETYLHRI 421
Score = 37 (18.1 bits), Expect = 1.3e-139, Sum P(2) = 1.3e-139
Identities = 14/36 (38%), Positives = 16/36 (44%)
Query: 5 RGRYPPGIGSGRGG-----VNA-SNPSFQSSRPQQQ 34
RG P G G GG +N N S +S QQQ
Sbjct: 22 RGPLKPSAGPGGGGTQTQQINQLKNASTINSGSQQQ 57
>RGD|1564560 [details] [associations]
symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box helicase 6"
species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA;ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA;ISO] [GO:0016442 "RNA-induced silencing
complex" evidence=IEA;ISO] [GO:0033962 "cytoplasmic mRNA processing
body assembly" evidence=IEA;ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1564560
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CH473975 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4J1182 CTD:1656
IPI:IPI00558056 RefSeq:NP_001102762.1 UniGene:Rn.231713
Ensembl:ENSRNOT00000017391 GeneID:500988 KEGG:rno:500988
UCSC:RGD:1564560 NextBio:707903 Uniprot:D3ZD73
Length = 483
Score = 1355 (482.0 bits), Expect = 1.9e-138, P = 1.9e-138
Identities = 259/374 (69%), Positives = 309/374 (82%)
Query: 73 SSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELL 132
S+I + ++ QS AA DWK LK+PP D R +T DVT+TKGNEFEDY LKRELL
Sbjct: 49 STINNGTQQQAQSMAATIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELL 108
Query: 133 MGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVV 192
MGIFE G+E+PSPIQEESIPIAL+G DILARAKNGTGK+ A+ IP LE++D + IQ +
Sbjct: 109 MGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAM 168
Query: 193 ILVPTRELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 251
++VPTRELALQ SQ+C ++ KH+ +VM TTGGT+L+DDIMRL VH+++ TPGRILD
Sbjct: 169 VIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILD 228
Query: 252 LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFK 311
L KKGV + M+V+DEADKLLS +F +E +I LP NRQIL++SATFP++V+ F
Sbjct: 229 LIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFM 288
Query: 312 DKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVE 371
+ +LQKPY INLM+ELTLKG+TQYYA+V ERQKVHCLNTLFS+LQINQSIIFCNS RVE
Sbjct: 289 NSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVE 348
Query: 372 LLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVIN 431
LLAKKI++LGYSCFYIHAKM Q+HRNRVFHDFRNG CRNLVCTDLFTRGIDIQAVNVVIN
Sbjct: 349 LLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVIN 408
Query: 432 FDFPKNSETYLHRV 445
FDFPK +ETYLHR+
Sbjct: 409 FDFPKLAETYLHRI 422
>MGI|MGI:104976 [details] [associations]
symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 6"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=ISO] [GO:0016442 "RNA-induced silencing complex"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:104976 GO:GO:0005524
GO:GO:0003723 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 KO:K12614 OMA:YSHARMK InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG106685 OrthoDB:EOG4J1182 CTD:1656
EMBL:D50494 EMBL:AK054144 EMBL:AK148483 EMBL:BC021452 EMBL:AF038995
IPI:IPI00109932 RefSeq:NP_001104296.1 RefSeq:NP_031867.1
RefSeq:NP_851841.2 UniGene:Mm.267061 ProteinModelPortal:P54823
SMR:P54823 IntAct:P54823 STRING:P54823 PhosphoSite:P54823
PaxDb:P54823 PRIDE:P54823 Ensembl:ENSMUST00000170489 GeneID:13209
KEGG:mmu:13209 UCSC:uc009pdy.2 InParanoid:P54823 NextBio:283376
Bgee:P54823 CleanEx:MM_DDX6 Genevestigator:P54823
GermOnline:ENSMUSG00000032097 Uniprot:P54823
Length = 483
Score = 1352 (481.0 bits), Expect = 4.0e-138, P = 4.0e-138
Identities = 259/374 (69%), Positives = 308/374 (82%)
Query: 73 SSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELL 132
S+I + + QS AA DWK LK+PP D R +T DVT+TKGNEFEDY LKRELL
Sbjct: 49 STINNGTPQQAQSMAATIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELL 108
Query: 133 MGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVV 192
MGIFE G+E+PSPIQEESIPIAL+G DILARAKNGTGK+ A+ IP LE++D + IQ +
Sbjct: 109 MGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAM 168
Query: 193 ILVPTRELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 251
++VPTRELALQ SQ+C ++ KH+ +VM TTGGT+L+DDIMRL VH+++ TPGRILD
Sbjct: 169 VIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILD 228
Query: 252 LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFK 311
L KKGV + M+V+DEADKLLS +F +E +I LP NRQIL++SATFP++V+ F
Sbjct: 229 LIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFM 288
Query: 312 DKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVE 371
+ +LQKPY INLM+ELTLKG+TQYYA+V ERQKVHCLNTLFS+LQINQSIIFCNS RVE
Sbjct: 289 NSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVE 348
Query: 372 LLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVIN 431
LLAKKI++LGYSCFYIHAKM Q+HRNRVFHDFRNG CRNLVCTDLFTRGIDIQAVNVVIN
Sbjct: 349 LLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVIN 408
Query: 432 FDFPKNSETYLHRV 445
FDFPK +ETYLHR+
Sbjct: 409 FDFPKLAETYLHRI 422
>UNIPROTKB|F1SAJ5 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:FP089499
RefSeq:XP_003129962.1 RefSeq:XP_003357372.1 UniGene:Ssc.97711
Ensembl:ENSSSCT00000016463 GeneID:100515499 KEGG:ssc:100515499
Uniprot:F1SAJ5
Length = 483
Score = 1348 (479.6 bits), Expect = 1.1e-137, P = 1.1e-137
Identities = 257/374 (68%), Positives = 308/374 (82%)
Query: 73 SSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELL 132
++I + ++ QS A DWK LK+PP D R +T DVT+TKGNEFEDY LKRELL
Sbjct: 49 NTINNGTQQQAQSMTATIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELL 108
Query: 133 MGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVV 192
MGIFE G+E+PSPIQEESIPIAL+G DILARAKNGTGK+ A+ IP LE++D + IQ +
Sbjct: 109 MGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAM 168
Query: 193 ILVPTRELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 251
++VPTRELALQ SQ+C ++ KH+ +VM TTGGT+L+DDIMRL VH+++ TPGRILD
Sbjct: 169 VIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILD 228
Query: 252 LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFK 311
L KKGV + M+V+DEADKLLS +F +E +I LP NRQIL++SATFP++V+ F
Sbjct: 229 LIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFM 288
Query: 312 DKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVE 371
+ +LQKPY INLM+ELTLKG+TQYYA+V ERQKVHCLNTLFS+LQINQSIIFCNS RVE
Sbjct: 289 NSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVE 348
Query: 372 LLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVIN 431
LLAKKI++LGYSCFYIHAKM Q+HRNRVFHDFRNG CRNLVCTDLFTRGIDIQAVNVVIN
Sbjct: 349 LLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVIN 408
Query: 432 FDFPKNSETYLHRV 445
FDFPK +ETYLHR+
Sbjct: 409 FDFPKLAETYLHRI 422
>UNIPROTKB|Q5ZKB9 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962 GO:GO:0008026
eggNOG:COG0513 GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 HSSP:P26196
EMBL:AJ720165 IPI:IPI00595692 UniGene:Gga.2331
ProteinModelPortal:Q5ZKB9 SMR:Q5ZKB9 Ensembl:ENSGALT00000012405
HOVERGEN:HBG106685 InParanoid:Q5ZKB9 OrthoDB:EOG4J1182
ArrayExpress:Q5ZKB9 Uniprot:Q5ZKB9
Length = 483
Score = 1346 (478.9 bits), Expect = 1.7e-137, P = 1.7e-137
Identities = 256/374 (68%), Positives = 308/374 (82%)
Query: 73 SSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELL 132
++I + ++ QS DWK LK+PP D R +T DVT+TKGNEFEDY LKRELL
Sbjct: 49 NTINNGTQQQAQSMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELL 108
Query: 133 MGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVV 192
MGIFE G+E+PSPIQEESIPIAL+G DILARAKNGTGK+ A+ IP LE++D + IQ +
Sbjct: 109 MGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAM 168
Query: 193 ILVPTRELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 251
++VPTRELALQ SQ+C ++ KH+ +VM TTGGT+L+DDIMRL VH+++ TPGRILD
Sbjct: 169 VIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILD 228
Query: 252 LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFK 311
L KKGV ++ M+V+DEADKLLS +F +E +I LP NRQIL++SATFP++V+ F
Sbjct: 229 LIKKGVAKVEHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFM 288
Query: 312 DKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVE 371
+ +LQKPY INLM+ELTLKG+TQYYA+V ERQKVHCLNTLFS+LQINQSIIFCNS RVE
Sbjct: 289 NSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVE 348
Query: 372 LLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVIN 431
LLAKKI++LGYSCFYIHAKM Q+HRNRVFHDFRNG CRNLVCTDLFTRGIDIQAVNVVIN
Sbjct: 349 LLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVIN 408
Query: 432 FDFPKNSETYLHRV 445
FDFPK +ETYLHR+
Sbjct: 409 FDFPKLAETYLHRI 422
>UNIPROTKB|E1BDM8 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:DAAA02040478
EMBL:DAAA02040479 IPI:IPI00697295 RefSeq:NP_001137339.1
UniGene:Bt.12357 PRIDE:E1BDM8 Ensembl:ENSBTAT00000011952
GeneID:513906 KEGG:bta:513906 NextBio:20871085 Uniprot:E1BDM8
Length = 483
Score = 1344 (478.2 bits), Expect = 2.8e-137, P = 2.8e-137
Identities = 256/374 (68%), Positives = 307/374 (82%)
Query: 73 SSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELL 132
++I + ++ QS DWK LK+PP D R +T DVT+TKGNEFEDY LKRELL
Sbjct: 49 NTINNGTQQQAQSMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELL 108
Query: 133 MGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVV 192
MGIFE G+E+PSPIQEESIPIAL+G DILARAKNGTGK+ A+ IP LE++D + IQ +
Sbjct: 109 MGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAM 168
Query: 193 ILVPTRELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 251
++VPTRELALQ SQ+C ++ KH+ +VM TTGGT+L+DDIMRL VH+++ TPGRILD
Sbjct: 169 VIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILD 228
Query: 252 LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFK 311
L KKGV + M+V+DEADKLLS +F +E +I LP NRQIL++SATFP++V+ F
Sbjct: 229 LIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFM 288
Query: 312 DKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVE 371
+ +LQKPY INLM+ELTLKG+TQYYA+V ERQKVHCLNTLFS+LQINQSIIFCNS RVE
Sbjct: 289 NSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVE 348
Query: 372 LLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVIN 431
LLAKKI++LGYSCFYIHAKM Q+HRNRVFHDFRNG CRNLVCTDLFTRGIDIQAVNVVIN
Sbjct: 349 LLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVIN 408
Query: 432 FDFPKNSETYLHRV 445
FDFPK +ETYLHR+
Sbjct: 409 FDFPKLAETYLHRI 422
>UNIPROTKB|E2RR01 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:AAEX03003444
RefSeq:XP_849975.1 Ensembl:ENSCAFT00000019743 GeneID:479414
KEGG:cfa:479414 NextBio:20854600 Uniprot:E2RR01
Length = 483
Score = 1344 (478.2 bits), Expect = 2.8e-137, P = 2.8e-137
Identities = 256/374 (68%), Positives = 307/374 (82%)
Query: 73 SSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELL 132
++I + ++ QS DWK LK+PP D R +T DVT+TKGNEFEDY LKRELL
Sbjct: 49 NTINNGTQQQAQSMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELL 108
Query: 133 MGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVV 192
MGIFE G+E+PSPIQEESIPIAL+G DILARAKNGTGK+ A+ IP LE++D + IQ +
Sbjct: 109 MGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAM 168
Query: 193 ILVPTRELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 251
++VPTRELALQ SQ+C ++ KH+ +VM TTGGT+L+DDIMRL VH+++ TPGRILD
Sbjct: 169 VIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILD 228
Query: 252 LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFK 311
L KKGV + M+V+DEADKLLS +F +E +I LP NRQIL++SATFP++V+ F
Sbjct: 229 LIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFM 288
Query: 312 DKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVE 371
+ +LQKPY INLM+ELTLKG+TQYYA+V ERQKVHCLNTLFS+LQINQSIIFCNS RVE
Sbjct: 289 NSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVE 348
Query: 372 LLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVIN 431
LLAKKI++LGYSCFYIHAKM Q+HRNRVFHDFRNG CRNLVCTDLFTRGIDIQAVNVVIN
Sbjct: 349 LLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVIN 408
Query: 432 FDFPKNSETYLHRV 445
FDFPK +ETYLHR+
Sbjct: 409 FDFPKLAETYLHRI 422
>UNIPROTKB|P26196 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0004386 "helicase activity" evidence=TAS]
[GO:0003724 "RNA helicase activity" evidence=TAS] [GO:0016442
"RNA-induced silencing complex" evidence=IDA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IDA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0043928 "exonucleolytic
nuclear-transcribed mRNA catabolic process involved in
deadenylation-dependent decay" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
GO:GO:0010467 GO:GO:0003723 GO:GO:0000932 GO:GO:0016442
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043928 HOVERGEN:HBG106685 OrthoDB:EOG4J1182
EMBL:Z11685 EMBL:BC065007 EMBL:D17532 IPI:IPI00030320 PIR:S22651
RefSeq:NP_001244120.1 RefSeq:NP_004388.2 UniGene:Hs.408461 PDB:1VEC
PDB:2WAX PDB:2WAY PDBsum:1VEC PDBsum:2WAX PDBsum:2WAY
ProteinModelPortal:P26196 SMR:P26196 DIP:DIP-29195N IntAct:P26196
STRING:P26196 PhosphoSite:P26196 DMDM:116241327
DOSAC-COBS-2DPAGE:P26196 PaxDb:P26196 PeptideAtlas:P26196
PRIDE:P26196 DNASU:1656 Ensembl:ENST00000264018
Ensembl:ENST00000526070 Ensembl:ENST00000534980 GeneID:1656
KEGG:hsa:1656 UCSC:uc001pub.2 CTD:1656 GeneCards:GC11M118654
HGNC:HGNC:2747 HPA:CAB004668 HPA:HPA024201 HPA:HPA026644 MIM:600326
neXtProt:NX_P26196 PharmGKB:PA27229 InParanoid:P26196
PhylomeDB:P26196 ChiTaRS:DDX6 EvolutionaryTrace:P26196
GenomeRNAi:1656 NextBio:6820 ArrayExpress:P26196 Bgee:P26196
CleanEx:HS_DDX6 Genevestigator:P26196 GermOnline:ENSG00000110367
Uniprot:P26196
Length = 483
Score = 1344 (478.2 bits), Expect = 2.8e-137, P = 2.8e-137
Identities = 256/374 (68%), Positives = 307/374 (82%)
Query: 73 SSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELL 132
++I + ++ QS DWK LK+PP D R +T DVT+TKGNEFEDY LKRELL
Sbjct: 49 NTINNGTQQQAQSMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELL 108
Query: 133 MGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVV 192
MGIFE G+E+PSPIQEESIPIAL+G DILARAKNGTGK+ A+ IP LE++D + IQ +
Sbjct: 109 MGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAM 168
Query: 193 ILVPTRELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 251
++VPTRELALQ SQ+C ++ KH+ +VM TTGGT+L+DDIMRL VH+++ TPGRILD
Sbjct: 169 VIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILD 228
Query: 252 LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFK 311
L KKGV + M+V+DEADKLLS +F +E +I LP NRQIL++SATFP++V+ F
Sbjct: 229 LIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFM 288
Query: 312 DKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVE 371
+ +LQKPY INLM+ELTLKG+TQYYA+V ERQKVHCLNTLFS+LQINQSIIFCNS RVE
Sbjct: 289 NSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVE 348
Query: 372 LLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVIN 431
LLAKKI++LGYSCFYIHAKM Q+HRNRVFHDFRNG CRNLVCTDLFTRGIDIQAVNVVIN
Sbjct: 349 LLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVIN 408
Query: 432 FDFPKNSETYLHRV 445
FDFPK +ETYLHR+
Sbjct: 409 FDFPKLAETYLHRI 422
>UNIPROTKB|E1C8R1 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 UniGene:Gga.2331 CTD:1656 EMBL:AADN02058042
EMBL:AADN02058043 IPI:IPI00818395 RefSeq:NP_001006319.2
PRIDE:E1C8R1 Ensembl:ENSGALT00000040594 GeneID:419783
KEGG:gga:419783 NextBio:20822787 ArrayExpress:E1C8R1 Uniprot:E1C8R1
Length = 483
Score = 1341 (477.1 bits), Expect = 5.8e-137, P = 5.8e-137
Identities = 255/374 (68%), Positives = 308/374 (82%)
Query: 73 SSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELL 132
++I + ++ QS DWK LK+PP D R +T DVT+TKGNEFEDY LKRELL
Sbjct: 49 NTINNGTQQQAQSMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELL 108
Query: 133 MGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVV 192
MGIFE G+E+PSPIQEESIPIAL+G DILARAKNGTGK+ A+ IP LE++D + IQ +
Sbjct: 109 MGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAM 168
Query: 193 ILVPTRELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 251
++VPTRELALQ SQ+C ++ KH+ +VM TTGGT+L+DDIMRL VH+++ TPGRILD
Sbjct: 169 VIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILD 228
Query: 252 LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFK 311
L KKGV ++ M+V+DEA+KLLS +F +E +I LP NRQIL++SATFP++V+ F
Sbjct: 229 LIKKGVAKVEHVQMIVLDEANKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFM 288
Query: 312 DKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVE 371
+ +LQKPY INLM+ELTLKG+TQYYA+V ERQKVHCLNTLFS+LQINQSIIFCNS RVE
Sbjct: 289 NSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVE 348
Query: 372 LLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVIN 431
LLAKKI++LGYSCFYIHAKM Q+HRNRVFHDFRNG CRNLVCTDLFTRGIDIQAVNVVIN
Sbjct: 349 LLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVIN 408
Query: 432 FDFPKNSETYLHRV 445
FDFPK +ETYLHR+
Sbjct: 409 FDFPKLAETYLHRI 422
>SGD|S000002319 [details] [associations]
symbol:DHH1 "Cytoplasmic DExD/H-box helicase, stimulates mRNA
decapping" species:4932 "Saccharomyces cerevisiae" [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0034063 "stress granule assembly"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=IMP] [GO:0003724 "RNA helicase activity" evidence=IGI;ISS]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002319 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 EMBL:BK006938 GO:GO:0003723
GO:GO:0000753 GO:GO:0000932 EMBL:Z67750 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0034063 GO:GO:0008026 eggNOG:COG0513
GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000290 OrthoDB:EOG4QJVWF EMBL:X66057 EMBL:Z74208 PIR:S31229
RefSeq:NP_010121.1 PDB:1S2M PDBsum:1S2M ProteinModelPortal:P39517
SMR:P39517 DIP:DIP-1243N IntAct:P39517 MINT:MINT-385061
STRING:P39517 PaxDb:P39517 PeptideAtlas:P39517 EnsemblFungi:YDL160C
GeneID:851394 KEGG:sce:YDL160C CYGD:YDL160c
EvolutionaryTrace:P39517 NextBio:968552 Genevestigator:P39517
GermOnline:YDL160C Uniprot:P39517
Length = 506
Score = 1340 (476.8 bits), Expect = 7.4e-137, P = 7.4e-137
Identities = 252/352 (71%), Positives = 296/352 (84%)
Query: 94 QDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPI 153
+DWK L IP DTR +T+DV TKGN FED++LKRELLMGIFE GFE+PSPIQEE+IP+
Sbjct: 20 RDWKTALNIPKKDTRPQTDDVLNTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPV 79
Query: 154 ALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGK 213
A+TG DILARAKNGTGKTAAF IP LEK+ N IQ +I+VPTRELALQTSQV + LGK
Sbjct: 80 AITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGK 139
Query: 214 HLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADK 273
H I MVTTGGT+L+DDI+RL + VH+LVGTPGR+LDL+ + V L DCS+ +MDEADK
Sbjct: 140 HCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADK 199
Query: 274 LLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGIT 333
+LS +F+ +EQ++ FLP Q L+FSATFP+TVK+F K+L KPY INLM+ELTLKGIT
Sbjct: 200 MLSRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINLMEELTLKGIT 259
Query: 334 QYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQ 393
QYYAFVEERQK+HCLNTLFSKLQINQ+IIFCNS NRVELLAKKIT+LGYSC+Y HA+M Q
Sbjct: 260 QYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQ 319
Query: 394 DHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RN+VFH+FR G R LVC+DL TRGIDIQAVNVVINFDFPK +ETYLHR+
Sbjct: 320 QERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRI 371
>CGD|CAL0006152 [details] [associations]
symbol:DHH1 species:5476 "Candida albicans" [GO:0010494
"cytoplasmic stress granule" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0030996 "cell cycle arrest
in response to nitrogen starvation" evidence=IEA] [GO:0034063
"stress granule assembly" evidence=IEA] [GO:0000753 "cell
morphogenesis involved in conjugation with cellular fusion"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0000290 "deadenylation-dependent
decapping of nuclear-transcribed mRNA" evidence=IEA] [GO:0031142
"induction of conjugation upon nitrogen starvation" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0006152 GO:GO:0005524 GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037 eggNOG:COG0513
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_718704.1
RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3 SMR:Q5AAW3
GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 1339 (476.4 bits), Expect = 9.5e-137, P = 9.5e-137
Identities = 254/351 (72%), Positives = 294/351 (83%)
Query: 95 DWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIA 154
+WK L +PP DTR +TEDV TKG FED+ LKRELLMGIFE GFE+PSPIQEESIP+A
Sbjct: 5 NWKQNLNLPPKDTRPQTEDVLNTKGKSFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMA 64
Query: 155 LTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKH 214
L G DILARAKNGTGKTA+F IP L+ + N +Q +ILVPTRELALQTSQV + LGKH
Sbjct: 65 LAGRDILARAKNGTGKTASFIIPCLQLVKPKLNKVQALILVPTRELALQTSQVVRTLGKH 124
Query: 215 LNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKL 274
+ Q MVTTGGTSL+DDI+RL+ PVH+LVGTPGR+LDL+ + V L +C + VMDEADK+
Sbjct: 125 VGTQCMVTTGGTSLRDDIVRLHDPVHILVGTPGRVLDLAARKVVDLSECPLFVMDEADKM 184
Query: 275 LSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQ 334
LS EF+ +EQ++ F P NRQ L+FSATFP+ VK F DK+L KPY INLMDELTLKGI+Q
Sbjct: 185 LSREFKGIIEQILEFFPPNRQALLFSATFPLAVKSFMDKHLTKPYEINLMDELTLKGISQ 244
Query: 335 YYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQD 394
+YAFVEE+QK+HCLNTLFSKLQINQSIIFCNS NRVELLAKKITELGYSC+Y HAKM Q
Sbjct: 245 FYAFVEEKQKLHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQ 304
Query: 395 HRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RN+VFH+FR G RNLVC+DL TRGIDIQAVNVVINFDFPK +ETYLHR+
Sbjct: 305 ARNKVFHEFRQGKVRNLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRI 355
>UNIPROTKB|Q5AAW3 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:237561 "Candida albicans SC5314" [GO:0010494 "cytoplasmic
stress granule" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0006152 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_718704.1 RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3
SMR:Q5AAW3 GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 1339 (476.4 bits), Expect = 9.5e-137, P = 9.5e-137
Identities = 254/351 (72%), Positives = 294/351 (83%)
Query: 95 DWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIA 154
+WK L +PP DTR +TEDV TKG FED+ LKRELLMGIFE GFE+PSPIQEESIP+A
Sbjct: 5 NWKQNLNLPPKDTRPQTEDVLNTKGKSFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMA 64
Query: 155 LTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKH 214
L G DILARAKNGTGKTA+F IP L+ + N +Q +ILVPTRELALQTSQV + LGKH
Sbjct: 65 LAGRDILARAKNGTGKTASFIIPCLQLVKPKLNKVQALILVPTRELALQTSQVVRTLGKH 124
Query: 215 LNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKL 274
+ Q MVTTGGTSL+DDI+RL+ PVH+LVGTPGR+LDL+ + V L +C + VMDEADK+
Sbjct: 125 VGTQCMVTTGGTSLRDDIVRLHDPVHILVGTPGRVLDLAARKVVDLSECPLFVMDEADKM 184
Query: 275 LSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQ 334
LS EF+ +EQ++ F P NRQ L+FSATFP+ VK F DK+L KPY INLMDELTLKGI+Q
Sbjct: 185 LSREFKGIIEQILEFFPPNRQALLFSATFPLAVKSFMDKHLTKPYEINLMDELTLKGISQ 244
Query: 335 YYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQD 394
+YAFVEE+QK+HCLNTLFSKLQINQSIIFCNS NRVELLAKKITELGYSC+Y HAKM Q
Sbjct: 245 FYAFVEEKQKLHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQ 304
Query: 395 HRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RN+VFH+FR G RNLVC+DL TRGIDIQAVNVVINFDFPK +ETYLHR+
Sbjct: 305 ARNKVFHEFRQGKVRNLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRI 355
>ZFIN|ZDB-GENE-070912-83 [details] [associations]
symbol:ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
6" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-070912-83 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 InterPro:IPR014014 PROSITE:PS51195
EMBL:CR759774 IPI:IPI00505165 ProteinModelPortal:E7FD91
Ensembl:ENSDART00000087382 Bgee:E7FD91 Uniprot:E7FD91
Length = 485
Score = 1336 (475.4 bits), Expect = 2.0e-136, P = 2.0e-136
Identities = 256/377 (67%), Positives = 308/377 (81%)
Query: 71 ADSSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRE 130
A S++ + + V + + DWK LK+PP D R +T DVTATKGNEFEDY LKRE
Sbjct: 48 ASSTVNNGNSQPVPTANTIIKPGDDWKKNLKLPPKDLRMKTSDVTATKGNEFEDYCLKRE 107
Query: 131 LLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQ 190
LLMGIFE G+E+PSPIQEESIPIAL+G DILARAKNGTGK+ A+ IP LE+ID + IQ
Sbjct: 108 LLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDSIQ 167
Query: 191 V-VILVPTRELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGR 248
V++VPTRELALQ SQ+C ++ KH+ ++VM TTGGT+L+DDIMRL + VH+++ TPGR
Sbjct: 168 AAVVIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGR 227
Query: 249 ILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVK 308
ILDL KKGV + M+V+DEADKLLS +F +E+++ L RQIL++SATFP++V+
Sbjct: 228 ILDLIKKGVAKVGQVQMIVLDEADKLLSQDFVQMMEEILSSLSKQRQILLYSATFPLSVQ 287
Query: 309 DFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVN 368
F + +LQKPY INLM+ELTLKG+TQYYA+V ERQKVHCLNTLFS+LQINQSIIFCNS
Sbjct: 288 KFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQ 347
Query: 369 RVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNV 428
RVELLAKKI++LGYSCFYIHAKM Q+HRNRVFHDFRNG CRNLVCTDLFTRGIDIQAVNV
Sbjct: 348 RVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNV 407
Query: 429 VINFDFPKNSETYLHRV 445
VINFDFPK ETYLHR+
Sbjct: 408 VINFDFPKLGETYLHRI 424
>WB|WBGene00000479 [details] [associations]
symbol:cgh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0051729 "germline cell cycle switching, mitotic
to meiotic cell cycle" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0010467 "gene expression" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007276 "gamete generation" evidence=IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043186 "P granule" evidence=IDA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IDA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0017148 "negative regulation of translation"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
Uniprot:Q95YF3
Length = 430
Score = 1331 (473.6 bits), Expect = 6.7e-136, P = 6.7e-136
Identities = 247/352 (70%), Positives = 295/352 (83%)
Query: 94 QDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPI 153
++WKA L +P D R++T DVT TKG EFED+ L R+LLMGIFEKG+E+PSPIQE SI +
Sbjct: 17 ENWKAGLNLPAKDRRFKTADVTDTKGVEFEDFCLGRDLLMGIFEKGWEKPSPIQEASIGV 76
Query: 154 ALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGK 213
ALTG DILARAKNGTGKT A+CIP +EKI IQ +++VPTRELALQTSQ+C EL K
Sbjct: 77 ALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSK 136
Query: 214 HLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADK 273
H+ ++VMVTTGGT L+DDIMRL VHL++ TPGRILDL +KGV ++ C LV+DEADK
Sbjct: 137 HIQLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGRILDLMEKGVAKMEHCKTLVLDEADK 196
Query: 274 LLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGIT 333
LLS +FQ +++LI FLP RQ++++SATFP TV F K++ KPY INLM+ELTL G+T
Sbjct: 197 LLSQDFQGILDRLINFLPKERQVMLYSATFPNTVTSFMQKHMHKPYEINLMEELTLLGVT 256
Query: 334 QYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQ 393
QYYAFV+E+QKVHCLNTLF KLQINQSIIFCNS RVELLAKKITE+GYSC+YIH+KM Q
Sbjct: 257 QYYAFVQEKQKVHCLNTLFRKLQINQSIIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQ 316
Query: 394 DHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
+HRNRVFHDFR G CRNLVC+DL TRGIDIQAVNVVINFDFP+N+ETYLHR+
Sbjct: 317 NHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLHRI 368
>UNIPROTKB|Q95YF3 [details] [associations]
symbol:cgh-1 "ATP-dependent RNA helicase cgh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
Uniprot:Q95YF3
Length = 430
Score = 1331 (473.6 bits), Expect = 6.7e-136, P = 6.7e-136
Identities = 247/352 (70%), Positives = 295/352 (83%)
Query: 94 QDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPI 153
++WKA L +P D R++T DVT TKG EFED+ L R+LLMGIFEKG+E+PSPIQE SI +
Sbjct: 17 ENWKAGLNLPAKDRRFKTADVTDTKGVEFEDFCLGRDLLMGIFEKGWEKPSPIQEASIGV 76
Query: 154 ALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGK 213
ALTG DILARAKNGTGKT A+CIP +EKI IQ +++VPTRELALQTSQ+C EL K
Sbjct: 77 ALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSK 136
Query: 214 HLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADK 273
H+ ++VMVTTGGT L+DDIMRL VHL++ TPGRILDL +KGV ++ C LV+DEADK
Sbjct: 137 HIQLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGRILDLMEKGVAKMEHCKTLVLDEADK 196
Query: 274 LLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGIT 333
LLS +FQ +++LI FLP RQ++++SATFP TV F K++ KPY INLM+ELTL G+T
Sbjct: 197 LLSQDFQGILDRLINFLPKERQVMLYSATFPNTVTSFMQKHMHKPYEINLMEELTLLGVT 256
Query: 334 QYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQ 393
QYYAFV+E+QKVHCLNTLF KLQINQSIIFCNS RVELLAKKITE+GYSC+YIH+KM Q
Sbjct: 257 QYYAFVQEKQKVHCLNTLFRKLQINQSIIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQ 316
Query: 394 DHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
+HRNRVFHDFR G CRNLVC+DL TRGIDIQAVNVVINFDFP+N+ETYLHR+
Sbjct: 317 NHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLHRI 368
>WB|WBGene00002083 [details] [associations]
symbol:inf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
InParanoid:P27639 NextBio:890522 Uniprot:P27639
Length = 402
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 130/326 (39%), Positives = 215/326 (65%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F+D LK ELL GI+ GFE+PS IQ+ +I TG D++A+A++GTGKTA F + L++
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
ID ++ +Q +++ PTRELA Q +V LG++LN+ ++ GGTS++DD +L +H+
Sbjct: 91 IDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHV 150
Query: 242 LVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSA 301
+VGTPGR+ D+ + M V+DEAD++LS F+ + ++ R +P + Q+++ SA
Sbjct: 151 VVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSA 210
Query: 302 TFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVEERQ-KVHCLNTLFSKLQINQ 359
T P V D +++++ P ++ DELTL+GI Q+Y V++ + K CL L++ + + Q
Sbjct: 211 TMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQ 270
Query: 360 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 419
++IFCN+ +V+ L +K+TE ++ +H M Q R+ + +FR+G+ R L+ TD+ R
Sbjct: 271 AVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILAR 330
Query: 420 GIDIQAVNVVINFDFPKNSETYLHRV 445
GID+Q V++VIN+D P N E Y+HR+
Sbjct: 331 GIDVQQVSLVINYDLPSNRENYIHRI 356
>CGD|CAL0004095 [details] [associations]
symbol:TIF species:5476 "Candida albicans" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095 GO:GO:0005524
GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045 EMBL:AACQ01000042
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 138/328 (42%), Positives = 206/328 (62%)
Query: 121 EFEDYFLKRELLMGIFEKGFERPSPIQEESI-PIALTGSDILARAKNGTGKTAAFCIPAL 179
+F+D LK ++ GIF G+E PS IQ+ +I PI G D+LA+A++GTGKTA F I AL
Sbjct: 24 KFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPIT-EGRDVLAQAQSGTGKTATFTISAL 82
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPV 239
++I+++ Q +IL PTRELALQ V +G +L + V + GGTS+ DDI V
Sbjct: 83 QRINENEKATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDDIEAFRSGV 142
Query: 240 HLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMF 299
++VGTPGR+LD+ ++ M ++DEAD++LS F+ + + R LP QI++
Sbjct: 143 QIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPETTQIVLL 202
Query: 300 SATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQI 357
SAT P V + K++ P ++ DELTL+GI Q+Y VE E K CL L+ + +
Sbjct: 203 SATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYKFDCLCDLYDSISV 262
Query: 358 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 417
Q++IFCN+ ++VE L K+ E ++ IHA + Q R+ + +FR+G+ R L+ TDL
Sbjct: 263 TQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLL 322
Query: 418 TRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 323 ARGIDVQQVSLVINYDLPANKENYIHRI 350
>UNIPROTKB|P87206 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:237561 "Candida albicans SC5314" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095
GO:GO:0005524 GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045
EMBL:AACQ01000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K03257 EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 138/328 (42%), Positives = 206/328 (62%)
Query: 121 EFEDYFLKRELLMGIFEKGFERPSPIQEESI-PIALTGSDILARAKNGTGKTAAFCIPAL 179
+F+D LK ++ GIF G+E PS IQ+ +I PI G D+LA+A++GTGKTA F I AL
Sbjct: 24 KFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPIT-EGRDVLAQAQSGTGKTATFTISAL 82
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPV 239
++I+++ Q +IL PTRELALQ V +G +L + V + GGTS+ DDI V
Sbjct: 83 QRINENEKATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDDIEAFRSGV 142
Query: 240 HLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMF 299
++VGTPGR+LD+ ++ M ++DEAD++LS F+ + + R LP QI++
Sbjct: 143 QIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPETTQIVLL 202
Query: 300 SATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQI 357
SAT P V + K++ P ++ DELTL+GI Q+Y VE E K CL L+ + +
Sbjct: 203 SATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYKFDCLCDLYDSISV 262
Query: 358 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 417
Q++IFCN+ ++VE L K+ E ++ IHA + Q R+ + +FR+G+ R L+ TDL
Sbjct: 263 TQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLL 322
Query: 418 TRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 323 ARGIDVQQVSLVINYDLPANKENYIHRI 350
>POMBASE|SPAC1F5.10 [details] [associations]
symbol:SPAC1F5.10 "ATP-dependent RNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
NextBio:20802696 Uniprot:Q10055
Length = 394
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 137/337 (40%), Positives = 209/337 (62%)
Query: 111 TEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 170
+EDV A + FE+ LK +LL GI+ G+E PS +Q +I G D++A+A++GTGK
Sbjct: 14 SEDVNAV--SSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQSGTGK 71
Query: 171 TAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKD 230
TA F I L+ ID Q +IL PTRELA+Q V LG H+N+Q GGTS+ +
Sbjct: 72 TATFSIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTSVGN 131
Query: 231 DIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFL 290
DI +L H++ GTPGR+ D+ ++ ++ ML++DEAD+LL+ F+ + + R+L
Sbjct: 132 DIKKLDYGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRYL 191
Query: 291 PANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVEERQ-KVHCL 348
P Q+++ SAT P V + +K+ P ++ DELTL+G+ QY+ VE+ + K L
Sbjct: 192 PPGTQVVVVSATLPQDVLEMTNKFTTNPVRILVKRDELTLEGLKQYFIAVEKEEWKFDTL 251
Query: 349 NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC 408
L+ L I Q++IFCNS +V+ L +K+ E ++ +H +M Q R+ + DFR G
Sbjct: 252 CDLYDTLTITQAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNS 311
Query: 409 RNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
R L+CTD++ RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 312 RVLICTDIWARGIDVQQVSLVINYDLPANRENYIHRI 348
>POMBASE|SPAC1006.07 [details] [associations]
symbol:SPAC1006.07 "translation initiation factor eIF4A
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
"cytoplasmic translational initiation" evidence=NAS] [GO:0003743
"translation initiation factor activity" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
OMA:PILEMED NextBio:20803983 Uniprot:P47943
Length = 392
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 135/326 (41%), Positives = 204/326 (62%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F+D LK ELL GI+ GFERPS IQ+ +I L D+LA+A++GTGKTA F I L+K
Sbjct: 21 FDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSGTGKTATFSISVLQK 80
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
ID Q +IL PTRELA Q +V LG +N++ GGT ++DD+ L VH+
Sbjct: 81 IDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRDDMAALQAGVHV 140
Query: 242 LVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSA 301
+VGTPGR+ D+ ++ M V+DEAD++LS F+ + + + LP Q+++ SA
Sbjct: 141 VVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQLLPPTAQVVLLSA 200
Query: 302 TFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVEERQ-KVHCLNTLFSKLQINQ 359
T P V + K+++ P ++ DELTL+GI Q+Y VE+ + K+ L L+ + + Q
Sbjct: 201 TMPQDVLEVTTKFMRDPIRILVKKDELTLEGIKQFYVAVEKEEWKLDTLCDLYETVTVTQ 260
Query: 360 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 419
++IFCN+ +V+ L +++TE ++ +H M Q R+ + H+FR G+ R L+ TDL R
Sbjct: 261 AVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLAR 320
Query: 420 GIDIQAVNVVINFDFPKNSETYLHRV 445
GID+Q V++VIN+D P N E Y+HR+
Sbjct: 321 GIDVQQVSLVINYDLPANRENYIHRI 346
>ASPGD|ASPL0000037981 [details] [associations]
symbol:AN2932 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
Uniprot:Q5B948
Length = 398
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 136/356 (38%), Positives = 219/356 (61%)
Query: 92 SSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESI 151
+S D K +IP + +++T + F+ LK ELL G++ GFERPS IQ+ +I
Sbjct: 2 ASND-KGLEEIPDSQIESNYDEIT----DSFDSMELKPELLRGVYAYGFERPSAIQQRAI 56
Query: 152 PIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKEL 211
+ G+D++A+A++GTGKTA F I AL+K+D + Q +I+ PTRELA Q +V +
Sbjct: 57 LPIVKGNDVIAQAQSGTGKTATFSISALQKLDPNVKACQALIVAPTRELAQQIQKVVIAI 116
Query: 212 GKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEA 271
G +NIQ GGT+++DD+ L + ++VGTPGRI D+ ++ V M ++DEA
Sbjct: 117 GDFMNIQCHACIGGTAVRDDMNALREGPQIVVGTPGRIHDMIQRRVLKTDQMKMFILDEA 176
Query: 272 DKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLK 330
D++LS F + + + LP + Q+++ SAT P V + K+++ P ++ ELTL+
Sbjct: 177 DEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKQELTLE 236
Query: 331 GITQYYAFVEERQ-KVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHA 389
GI Q+Y VE+ + K+ L+ L+ + I Q++IFCN+ +V+ L K+T ++ +H
Sbjct: 237 GIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHG 296
Query: 390 KMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 297 DMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRI 352
>FB|FBgn0037573 [details] [associations]
symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
melanogaster" [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
Length = 399
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 137/337 (40%), Positives = 206/337 (61%)
Query: 111 TEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 170
+EDV F LK ELL GI+ GFE+PS IQ+ SI + G D++A+A++GTGK
Sbjct: 19 SEDVEVIP--TFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGTGK 76
Query: 171 TAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKD 230
TA F I L+ +D QV+ L PTRELA+Q +V LG +N+Q V GGT+L +
Sbjct: 77 TATFSISILQSLDTTLRETQVLCLSPTRELAVQIQKVILALGDMMNVQCHVCIGGTNLGE 136
Query: 231 DIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFL 290
DI +L H++ GTPGR+ D+ K+ V + MLV+DEAD++L+ F+ + + R+L
Sbjct: 137 DIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYL 196
Query: 291 PANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCL 348
P Q+++ SAT P + + K++ P ++ DELTL+GI Q++ VE E K L
Sbjct: 197 PPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTL 256
Query: 349 NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC 408
L+ L I Q++IFCN+ +V+ L +K+ E ++ +H M Q R+ + +FR G
Sbjct: 257 CDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQS 316
Query: 409 RNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
R L+ TD++ RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 317 RVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRI 353
>UNIPROTKB|A4QVP2 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
Uniprot:A4QVP2
Length = 396
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 132/328 (40%), Positives = 205/328 (62%)
Query: 120 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 179
+ F++ LK ELL GI+ GFERPS IQ+ +I + G D++A+A++GTGKTA F I L
Sbjct: 23 DSFDEMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVL 82
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPV 239
+KID + Q +IL PTRELA Q +V +G +NI+ GGTS++DD+ L
Sbjct: 83 QKIDTNVKQCQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTSVRDDMKALQDGP 142
Query: 240 HLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMF 299
++VGTPGR+ D+ ++ M V+DEAD++LS F + + + LP + Q+++
Sbjct: 143 QVVVGTPGRVHDMIQRRFLKTDGMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLL 202
Query: 300 SATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVEERQ-KVHCLNTLFSKLQI 357
SAT P V + K+++ P ++ DELTL+GI Q+Y VE+ + K+ L+ L+ + I
Sbjct: 203 SATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTI 262
Query: 358 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 417
Q++IFCN+ +V+ L K+T ++ +H M Q R+ + +FR+G+ R L+ TDL
Sbjct: 263 TQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLL 322
Query: 418 TRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 323 ARGIDVQQVSLVINYDLPANRENYIHRI 350
>ASPGD|ASPL0000014018 [details] [associations]
symbol:fal1 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:BN001302 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACD01000139 KO:K13025 RefSeq:XP_681285.1
ProteinModelPortal:Q5AUL4 SMR:Q5AUL4 PRIDE:Q5AUL4
EnsemblFungi:CADANIAT00004036 GeneID:2869287 KEGG:ani:AN8016.2
OMA:EDWKFDT OrthoDB:EOG4HTD1W Uniprot:Q5AUL4
Length = 399
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 134/326 (41%), Positives = 198/326 (60%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
FED LK LL GI+ G+E PS +Q +I G D +A+A++GTGKTA F I AL+
Sbjct: 27 FEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISALQV 86
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
ID Q ++L PTRELA Q V LG ++N+Q GGT++ +DI +L H+
Sbjct: 87 IDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHV 146
Query: 242 LVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSA 301
+ GTPGR+ D+ ++ + MLV+DEAD+LL+ F+ + + R+LP Q+++ SA
Sbjct: 147 VSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 206
Query: 302 TFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVEERQ-KVHCLNTLFSKLQINQ 359
T P V D K++ P V+ DELTL+GI QY+ VE+ + K L L+ L I Q
Sbjct: 207 TLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWKFDTLCDLYDTLTITQ 266
Query: 360 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 419
++IFCN+ +V+ L K+ E ++ +H +M Q R+ + DFR G R L+ TD++ R
Sbjct: 267 AVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWAR 326
Query: 420 GIDIQAVNVVINFDFPKNSETYLHRV 445
GID+Q V++VIN+D P N E Y+HR+
Sbjct: 327 GIDVQQVSLVINYDLPTNRENYIHRI 352
>TAIR|locus:2091191 [details] [associations]
symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0035145 "exon-exon junction complex" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
GermOnline:AT3G19760 Uniprot:Q94A52
Length = 408
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 123/326 (37%), Positives = 206/326 (63%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F D +K ++L G++E GFE+PS IQ+ ++ L G D++A+A++GTGKT+ + +
Sbjct: 37 FNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQV 96
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
+D + +Q +IL PTRELA QT + + +G H NIQ GG S+ +DI +L VH+
Sbjct: 97 VDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLEHGVHV 156
Query: 242 LVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSA 301
+ GTPGR+ D+ K+ + +L++DE+D++LS F+ + + R+LP + Q+ + SA
Sbjct: 157 VSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQVCLVSA 216
Query: 302 TFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ-KVHCLNTLFSKLQINQ 359
T P + + K++ +P I + DELTL+GI Q++ VE+ + K L L+ L I Q
Sbjct: 217 TLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQ 276
Query: 360 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 419
++IFCN+ +V+ L++K+ ++ +H M Q R+ + ++FR+G R L+ TD++ R
Sbjct: 277 AVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWAR 336
Query: 420 GIDIQAVNVVINFDFPKNSETYLHRV 445
GID+Q V++VIN+D P N E Y+HR+
Sbjct: 337 GIDVQQVSLVINYDLPNNRELYIHRI 362
>DICTYBASE|DDB_G0269192 [details] [associations]
symbol:tifA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0269192 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
KO:K13025 OMA:LALGDFM RefSeq:XP_646270.1 ProteinModelPortal:Q55D61
SMR:Q55D61 PRIDE:Q55D61 EnsemblProtists:DDB0191511 GeneID:8617226
KEGG:ddi:DDB_G0269192 Uniprot:Q55D61
Length = 405
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 133/326 (40%), Positives = 201/326 (61%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
FE L+ ELL GIF GFE+PS IQ+ +I + G D +A+A++GTGKTA F I AL+
Sbjct: 34 FESMGLREELLRGIFNYGFEKPSAIQQRAILPIIKGRDTIAQAQSGTGKTATFSIGALQC 93
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
++ + QV+IL PTRELA Q +V L + +NIQV GG +L DD+ +L VH+
Sbjct: 94 VEVNVRSPQVLILSPTRELAQQIQKVALALSEFMNIQVHACVGGKNLSDDVKKLETGVHI 153
Query: 242 LVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSA 301
+ GTPGR+LD+ + + M+++DEAD++LS FQ + + R+LP QI++ SA
Sbjct: 154 VSGTPGRVLDMITRKSLPTRHIKMMILDEADEMLSLGFQQQINDVYRYLPNGTQIVLVSA 213
Query: 302 TFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ-KVHCLNTLFSKLQINQ 359
T V +K++ KP I L DELTL GI Q++ VE+ K L ++ L I Q
Sbjct: 214 TLTQDVVSMTEKFMTKPVRILLKRDELTLDGIKQFFVSVEKEDWKFGTLCDIYDSLTITQ 273
Query: 360 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 419
++IFCN+ +V+ L +++ + ++ +H M+Q R + FR+G R L+ TD+ R
Sbjct: 274 AVIFCNTKKKVDQLTEQMRDANFTVASMHGDMVQKEREEIIKSFRSGENRVLITTDILAR 333
Query: 420 GIDIQAVNVVINFDFPKNSETYLHRV 445
GID+Q V++VIN+D P + E Y+HR+
Sbjct: 334 GIDVQQVSLVINYDLPIDRENYIHRI 359
>ZFIN|ZDB-GENE-040426-915 [details] [associations]
symbol:eif4a3 "eukaryotic translation initiation
factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
Length = 406
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 128/335 (38%), Positives = 206/335 (61%)
Query: 113 DVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTA 172
DVT T F+ L+ +LL GI+ GFE+PS IQ+ +I + G D++A++++GTGKTA
Sbjct: 30 DVTPT----FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 85
Query: 173 AFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDI 232
FC+ L+ +D Q +IL PTRELA Q +V LG ++N+Q GGT++ +DI
Sbjct: 86 TFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDI 145
Query: 233 MRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPA 292
+L H++ GTPGR+ D+ ++ + MLV+DEAD++L+ F+ + + R+LP
Sbjct: 146 RKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 205
Query: 293 NRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNT 350
Q+ + SAT P + + +K++ P ++ DELTL+GI Q++ VE E K L
Sbjct: 206 ATQVCLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCD 265
Query: 351 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRN 410
L+ L I Q++IFCN+ +V+ L +K+ E ++ +H M Q R + +FR+GA R
Sbjct: 266 LYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRV 325
Query: 411 LVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
L+ TD++ RG+D+ V+++IN+D P N E Y+HR+
Sbjct: 326 LISTDVWARGLDVSQVSLIINYDLPNNRELYIHRI 360
>SGD|S000001767 [details] [associations]
symbol:TIF1 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
"eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 130/327 (39%), Positives = 199/327 (60%)
Query: 121 EFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 180
+F+D L LL G+F GFE PS IQ+ +I + G D+LA+A++GTGKT F I AL+
Sbjct: 23 KFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQ 82
Query: 181 KIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVH 240
+ID Q ++L PTRELALQ +V L H++I+V GGTS +D L +
Sbjct: 83 RIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGL-RDAQ 141
Query: 241 LLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFS 300
++VGTPGR+ D ++ M ++DEAD++LS F+ + Q+ LP Q+++ S
Sbjct: 142 IVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLS 201
Query: 301 ATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVEERQ-KVHCLNTLFSKLQIN 358
AT P V + K+++ P ++ DELTL+GI Q+Y VEE + K CL L+ + +
Sbjct: 202 ATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVT 261
Query: 359 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 418
Q++IFCN+ +VE L K+ ++ I++ + Q R+ + +FR+G+ R L+ TDL
Sbjct: 262 QAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLA 321
Query: 419 RGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 322 RGIDVQQVSLVINYDLPANKENYIHRI 348
>SGD|S000003674 [details] [associations]
symbol:TIF2 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 130/327 (39%), Positives = 199/327 (60%)
Query: 121 EFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 180
+F+D L LL G+F GFE PS IQ+ +I + G D+LA+A++GTGKT F I AL+
Sbjct: 23 KFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQ 82
Query: 181 KIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVH 240
+ID Q ++L PTRELALQ +V L H++I+V GGTS +D L +
Sbjct: 83 RIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGL-RDAQ 141
Query: 241 LLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFS 300
++VGTPGR+ D ++ M ++DEAD++LS F+ + Q+ LP Q+++ S
Sbjct: 142 IVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLS 201
Query: 301 ATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVEERQ-KVHCLNTLFSKLQIN 358
AT P V + K+++ P ++ DELTL+GI Q+Y VEE + K CL L+ + +
Sbjct: 202 ATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVT 261
Query: 359 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 418
Q++IFCN+ +VE L K+ ++ I++ + Q R+ + +FR+G+ R L+ TDL
Sbjct: 262 QAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLA 321
Query: 419 RGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 322 RGIDVQQVSLVINYDLPANKENYIHRI 348
>DICTYBASE|DDB_G0269146 [details] [associations]
symbol:ifdA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269146
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0045335 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K03257 OMA:AVINYHI EMBL:U78759
RefSeq:XP_645917.1 ProteinModelPortal:P90529 STRING:P90529
PRIDE:P90529 EnsemblProtists:DDB0191262 GeneID:8616858
KEGG:ddi:DDB_G0269146 InParanoid:P90529 Uniprot:P90529
Length = 395
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 136/329 (41%), Positives = 201/329 (61%)
Query: 120 NEFEDYFLKRELLMGIFEKGFERPSPIQEESI-PIALTGSDILARAKNGTGKTAAFCIPA 178
+ F++ L ++LL GI+ GFE+PS IQ+ +I P++ G DI+A+A++GTGKTA F +
Sbjct: 24 DSFDNMELPKDLLRGIYSYGFEKPSAIQQRAIIPLS-KGFDIIAQAQSGTGKTATFTVGI 82
Query: 179 LEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQP 238
L +ID Q +I+ PTRELA Q +V LG++L+I+ GGT + DDI L
Sbjct: 83 LSRIDISVLKCQALIIAPTRELAQQIQKVVLALGEYLHIKSYACIGGTKITDDIQALQSG 142
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
VH++VGTPGR+ ++ +G+ + +DEAD++LS F+ + ++ RFLP Q+ +
Sbjct: 143 VHVVVGTPGRVFEMLSRGIINRDTIRIFCLDEADEMLSRGFKDQIYEIFRFLPKTIQVGL 202
Query: 299 FSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQ 356
FSAT K++Q P I + DELTL+GI Q+Y V E+ K L L+ L
Sbjct: 203 FSATMTDETLGITSKFMQNPVSILVKKDELTLEGIRQFYVNVGVEQGKFEVLTDLYETLS 262
Query: 357 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
I QS+IFCN+ +V+ L K+TE ++ H Q R+ + FR+GA R L+ TDL
Sbjct: 263 ITQSVIFCNTRRKVDWLTSKMTEQKFTVSSTHGD--QKDRDGILQAFRSGATRVLITTDL 320
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+Q V++VINFD P N E Y+HR+
Sbjct: 321 LARGIDVQQVSLVINFDLPTNIENYIHRI 349
>SGD|S000002428 [details] [associations]
symbol:FAL1 "Nucleolar protein required for maturation of 18S
rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
Uniprot:Q12099
Length = 399
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 131/329 (39%), Positives = 205/329 (62%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
FE LK +LL GI+ GFE PS IQ +I ++G D++A+A++GTGKTA F I L+
Sbjct: 25 FESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLLQA 84
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQP-VH 240
ID +Q +IL PTRELA Q QV K LG ++N+ TGG +LKDD+ ++ +
Sbjct: 85 IDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQKHGCQ 144
Query: 241 LLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPE--FQPSVEQLIRFLPANRQILM 298
+ GTPGR+LD+ KK + ++ MLV+DEAD+LLS F+ + + LP N Q+++
Sbjct: 145 AVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVV 204
Query: 299 FSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ-KVHCLNTLFSKLQ 356
SAT + + K++ P I + DE++L+GI QY V++ + K L ++ L
Sbjct: 205 VSATMNKDILEVTRKFMNDPVKILVKRDEISLEGIKQYVVNVDKEEWKFDTLCDIYDSLT 264
Query: 357 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
I Q +IFCN+ +V+ L++++ + ++ +H M Q+ R++V +DFR G R L+ TD+
Sbjct: 265 ITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDV 324
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHRV 445
+ RGID+Q V++VIN+D P+ E Y+HR+
Sbjct: 325 WARGIDVQQVSLVINYDLPEIIENYIHRI 353
>UNIPROTKB|Q5ZM36 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
Length = 412
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 127/335 (37%), Positives = 206/335 (61%)
Query: 113 DVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTA 172
DVT T F+ L+ +LL GI+ GFE+PS IQ+ +I + G D++A++++GTGKTA
Sbjct: 36 DVTPT----FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 91
Query: 173 AFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDI 232
F I L+ +D Q +IL PTRELA+Q + LG ++N+Q GGT++ +DI
Sbjct: 92 TFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDI 151
Query: 233 MRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPA 292
+L H++ GTPGR+ D+ ++ + MLV+DEAD++L+ F+ + + R+LP
Sbjct: 152 RKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 211
Query: 293 NRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNT 350
Q+++ SAT P + + +K++ P ++ DELTL+GI Q++ VE E K L
Sbjct: 212 ATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCD 271
Query: 351 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRN 410
L+ L I Q++IFCN+ +V+ L +K+ E ++ +H M Q R + +FR+GA R
Sbjct: 272 LYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRV 331
Query: 411 LVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
L+ TD++ RG+D+ V+++IN+D P N E Y+HR+
Sbjct: 332 LISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI 366
>UNIPROTKB|Q2NL22 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
Uniprot:Q2NL22
Length = 411
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 127/335 (37%), Positives = 206/335 (61%)
Query: 113 DVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTA 172
DVT T F+ L+ +LL GI+ GFE+PS IQ+ +I + G D++A++++GTGKTA
Sbjct: 35 DVTPT----FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 90
Query: 173 AFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDI 232
F I L+ +D Q +IL PTRELA+Q + LG ++N+Q GGT++ +DI
Sbjct: 91 TFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDI 150
Query: 233 MRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPA 292
+L H++ GTPGR+ D+ ++ + MLV+DEAD++L+ F+ + + R+LP
Sbjct: 151 RKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 210
Query: 293 NRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNT 350
Q+++ SAT P + + +K++ P ++ DELTL+GI Q++ VE E K L
Sbjct: 211 ATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCD 270
Query: 351 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRN 410
L+ L I Q++IFCN+ +V+ L +K+ E ++ +H M Q R + +FR+GA R
Sbjct: 271 LYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRV 330
Query: 411 LVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
L+ TD++ RG+D+ V+++IN+D P N E Y+HR+
Sbjct: 331 LISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI 365
>UNIPROTKB|E2RDZ4 [details] [associations]
symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
"negative regulation of translation" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
Length = 411
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 127/335 (37%), Positives = 206/335 (61%)
Query: 113 DVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTA 172
DVT T F+ L+ +LL GI+ GFE+PS IQ+ +I + G D++A++++GTGKTA
Sbjct: 35 DVTPT----FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 90
Query: 173 AFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDI 232
F I L+ +D Q +IL PTRELA+Q + LG ++N+Q GGT++ +DI
Sbjct: 91 TFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDI 150
Query: 233 MRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPA 292
+L H++ GTPGR+ D+ ++ + MLV+DEAD++L+ F+ + + R+LP
Sbjct: 151 RKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 210
Query: 293 NRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNT 350
Q+++ SAT P + + +K++ P ++ DELTL+GI Q++ VE E K L
Sbjct: 211 ATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCD 270
Query: 351 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRN 410
L+ L I Q++IFCN+ +V+ L +K+ E ++ +H M Q R + +FR+GA R
Sbjct: 271 LYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRV 330
Query: 411 LVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
L+ TD++ RG+D+ V+++IN+D P N E Y+HR+
Sbjct: 331 LISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI 365
>UNIPROTKB|P38919 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IDA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
STRING:P38919 PhosphoSite:P38919 DMDM:20532400
REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
Uniprot:P38919
Length = 411
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 127/335 (37%), Positives = 206/335 (61%)
Query: 113 DVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTA 172
DVT T F+ L+ +LL GI+ GFE+PS IQ+ +I + G D++A++++GTGKTA
Sbjct: 35 DVTPT----FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 90
Query: 173 AFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDI 232
F I L+ +D Q +IL PTRELA+Q + LG ++N+Q GGT++ +DI
Sbjct: 91 TFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDI 150
Query: 233 MRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPA 292
+L H++ GTPGR+ D+ ++ + MLV+DEAD++L+ F+ + + R+LP
Sbjct: 151 RKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 210
Query: 293 NRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNT 350
Q+++ SAT P + + +K++ P ++ DELTL+GI Q++ VE E K L
Sbjct: 211 ATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCD 270
Query: 351 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRN 410
L+ L I Q++IFCN+ +V+ L +K+ E ++ +H M Q R + +FR+GA R
Sbjct: 271 LYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRV 330
Query: 411 LVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
L+ TD++ RG+D+ V+++IN+D P N E Y+HR+
Sbjct: 331 LISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI 365
>UNIPROTKB|A6M931 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
Length = 411
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 127/335 (37%), Positives = 206/335 (61%)
Query: 113 DVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTA 172
DVT T F+ L+ +LL GI+ GFE+PS IQ+ +I + G D++A++++GTGKTA
Sbjct: 35 DVTPT----FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 90
Query: 173 AFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDI 232
F I L+ +D Q +IL PTRELA+Q + LG ++N+Q GGT++ +DI
Sbjct: 91 TFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDI 150
Query: 233 MRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPA 292
+L H++ GTPGR+ D+ ++ + MLV+DEAD++L+ F+ + + R+LP
Sbjct: 151 RKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 210
Query: 293 NRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNT 350
Q+++ SAT P + + +K++ P ++ DELTL+GI Q++ VE E K L
Sbjct: 211 ATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCD 270
Query: 351 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRN 410
L+ L I Q++IFCN+ +V+ L +K+ E ++ +H M Q R + +FR+GA R
Sbjct: 271 LYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRV 330
Query: 411 LVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
L+ TD++ RG+D+ V+++IN+D P N E Y+HR+
Sbjct: 331 LISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI 365
>RGD|1591139 [details] [associations]
symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
Length = 411
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 127/335 (37%), Positives = 206/335 (61%)
Query: 113 DVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTA 172
DVT T F+ L+ +LL GI+ GFE+PS IQ+ +I + G D++A++++GTGKTA
Sbjct: 35 DVTPT----FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 90
Query: 173 AFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDI 232
F I L+ +D Q +IL PTRELA+Q + LG ++N+Q GGT++ +DI
Sbjct: 91 TFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDI 150
Query: 233 MRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPA 292
+L H++ GTPGR+ D+ ++ + MLV+DEAD++L+ F+ + + R+LP
Sbjct: 151 RKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 210
Query: 293 NRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNT 350
Q+++ SAT P + + +K++ P ++ DELTL+GI Q++ VE E K L
Sbjct: 211 ATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCD 270
Query: 351 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRN 410
L+ L I Q++IFCN+ +V+ L +K+ E ++ +H M Q R + +FR+GA R
Sbjct: 271 LYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRV 330
Query: 411 LVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
L+ TD++ RG+D+ V+++IN+D P N E Y+HR+
Sbjct: 331 LISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI 365
>WB|WBGene00022029 [details] [associations]
symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
Length = 399
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 125/326 (38%), Positives = 200/326 (61%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F+ L+ +LL GI+ GFE+PS IQ+ +IP L D++A+A++GTGKTA F I L+
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
+D Q +IL PTRELA+Q +V LG ++N+Q GGT+L +DI +L H+
Sbjct: 88 LDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHV 147
Query: 242 LVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSA 301
+ GTPGR+ D+ ++ + +LV+DEAD++L+ F+ + + R+LP Q+++ SA
Sbjct: 148 VSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSA 207
Query: 302 TFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQ 359
T P + + K++ P ++ DELTL+GI Q++ V+ E K L L+ L I Q
Sbjct: 208 TLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQ 267
Query: 360 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 419
+++FCN+ +V+ L K+ E ++ +H M Q R+ V +FR G R L+ TD++ R
Sbjct: 268 AVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWAR 327
Query: 420 GIDIQAVNVVINFDFPKNSETYLHRV 445
G+D+ V++VIN+D P N E Y+HR+
Sbjct: 328 GLDVPQVSLVINYDLPNNRELYIHRI 353
>WB|WBGene00018007 [details] [associations]
symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
Length = 399
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 124/326 (38%), Positives = 200/326 (61%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F+ L+ +LL GI+ GFE+PS IQ+ ++P L D++A+A++GTGKTA F I L+
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
+D Q +IL PTRELA+Q +V LG ++N+Q GGT+L +DI +L H+
Sbjct: 88 LDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHV 147
Query: 242 LVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSA 301
+ GTPGR+ D+ ++ + +LV+DEAD++L+ F+ + + R+LP Q+++ SA
Sbjct: 148 VSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSA 207
Query: 302 TFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQ 359
T P + + K++ P ++ DELTL+GI Q++ V+ E K L L+ L I Q
Sbjct: 208 TLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQ 267
Query: 360 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 419
+++FCN+ +V+ L K+ E ++ +H M Q R+ V +FR G R L+ TD++ R
Sbjct: 268 AVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWAR 327
Query: 420 GIDIQAVNVVINFDFPKNSETYLHRV 445
G+D+ V++VIN+D P N E Y+HR+
Sbjct: 328 GLDVPQVSLVINYDLPNNRELYIHRI 353
>GENEDB_PFALCIPARUM|PFD1070w [details] [associations]
symbol:PFD1070w "eukaryotic initiation factor,
putative" species:5833 "Plasmodium falciparum" [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 131/342 (38%), Positives = 204/342 (59%)
Query: 106 DTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAK 165
D Y+T + FE+ + LL GI+ GFE+PS IQ+ I L G D++ +++
Sbjct: 4 DDHYKTSEKYEIC-TSFENIGIDEGLLRGIYAYGFEKPSAIQQRGIKPILNGRDVILQSQ 62
Query: 166 NGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGG 225
+GTGKT F + AL ++++ N QV+IL PTRELA QT +VC L ++++ + GG
Sbjct: 63 SGTGKTCVFAVGALNCVNRNLNETQVIILSPTRELAEQTQKVCLALADYIHVTIYCCIGG 122
Query: 226 TSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQ 285
+ DDI L VH++ GTPGRI + K LV+DEAD++L+ F+ V
Sbjct: 123 KKMSDDIKALNNGVHVISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQVYD 182
Query: 286 LIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ- 343
+ RFL N QI++ SAT P V + +K++ KP I + DELTL+GI Q++ +E+ Q
Sbjct: 183 IYRFLSPNTQIILSSATLPQEVLEITNKFMHKPVKILVKRDELTLEGIKQFFVSIEKEQW 242
Query: 344 KVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDF 403
K L L+ L I Q+++FCN+ +V+ L KK+ E ++ +HA M Q R+ + F
Sbjct: 243 KYETLADLYESLTITQAVVFCNTQMKVDWLTKKMLESNFTVCKMHAGMSQSERDDIMLKF 302
Query: 404 RNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
R R L+ TD++ RG+D+Q V++V+N+D P + E+Y+HR+
Sbjct: 303 RQCKFRVLISTDIWGRGLDVQEVSLVVNYDLPNSRESYIHRI 344
>UNIPROTKB|Q8IFN9 [details] [associations]
symbol:PFD1070w "Eukaryotic initiation factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006446
"regulation of translational initiation" evidence=ISS] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 131/342 (38%), Positives = 204/342 (59%)
Query: 106 DTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAK 165
D Y+T + FE+ + LL GI+ GFE+PS IQ+ I L G D++ +++
Sbjct: 4 DDHYKTSEKYEIC-TSFENIGIDEGLLRGIYAYGFEKPSAIQQRGIKPILNGRDVILQSQ 62
Query: 166 NGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGG 225
+GTGKT F + AL ++++ N QV+IL PTRELA QT +VC L ++++ + GG
Sbjct: 63 SGTGKTCVFAVGALNCVNRNLNETQVIILSPTRELAEQTQKVCLALADYIHVTIYCCIGG 122
Query: 226 TSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQ 285
+ DDI L VH++ GTPGRI + K LV+DEAD++L+ F+ V
Sbjct: 123 KKMSDDIKALNNGVHVISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQVYD 182
Query: 286 LIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ- 343
+ RFL N QI++ SAT P V + +K++ KP I + DELTL+GI Q++ +E+ Q
Sbjct: 183 IYRFLSPNTQIILSSATLPQEVLEITNKFMHKPVKILVKRDELTLEGIKQFFVSIEKEQW 242
Query: 344 KVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDF 403
K L L+ L I Q+++FCN+ +V+ L KK+ E ++ +HA M Q R+ + F
Sbjct: 243 KYETLADLYESLTITQAVVFCNTQMKVDWLTKKMLESNFTVCKMHAGMSQSERDDIMLKF 302
Query: 404 RNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
R R L+ TD++ RG+D+Q V++V+N+D P + E+Y+HR+
Sbjct: 303 RQCKFRVLISTDIWGRGLDVQEVSLVVNYDLPNSRESYIHRI 344
>CGD|CAL0001638 [details] [associations]
symbol:FAL1 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0097078 "FAl1-SGD1 complex"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0001638 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ250879
RefSeq:XP_718509.1 RefSeq:XP_718592.1 ProteinModelPortal:Q5A9Z6
SMR:Q5A9Z6 GeneID:3639739 GeneID:3639839 KEGG:cal:CaO19.10024
KEGG:cal:CaO19.2488 KO:K13025 Uniprot:Q5A9Z6
Length = 399
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 132/336 (39%), Positives = 203/336 (60%)
Query: 116 ATKG----NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKT 171
+TKG FE LK +LL GI+ GFE PS IQ +I ++G D +A+A++GTGKT
Sbjct: 18 STKGIKVHRTFESMNLKPDLLKGIYAYGFETPSAIQSRAIMQIISGRDTIAQAQSGTGKT 77
Query: 172 AAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDD 231
A F I LE ID + Q +IL PTRELA+Q V K LG ++NI GG ++ +D
Sbjct: 78 ATFSIGMLEVIDTKSKECQALILSPTRELAIQIQNVVKHLGDYMNIHTHACIGGKNVGED 137
Query: 232 IMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLP 291
+ +L Q ++ GTPGR++D+ K+ ++ +L++DEAD+L + F+ + ++ + LP
Sbjct: 138 VKKLQQGQQIVSGTPGRVIDVIKRRNLQTRNIKVLILDEADELFTKGFKEQIYEIYKHLP 197
Query: 292 ANRQILMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVE-ERQKVHCLN 349
+ Q+++ SAT P V + K+ P I + DE++L GI QYY E E K L
Sbjct: 198 PSVQVVVVSATLPREVLEMTSKFTTDPVKILVKRDEISLSGIKQYYVQCEREDWKFDTLC 257
Query: 350 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 409
L+ L I Q++IFCN+ +V LA ++ + ++ +H M QD R+ + +DFR G R
Sbjct: 258 DLYDNLTITQAVIFCNTKLKVNWLADQMKKQNFTVVAMHGDMKQDERDSIMNDFRRGNSR 317
Query: 410 NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
L+ TD++ RGID+Q V++VIN+D P + E Y+HR+
Sbjct: 318 VLISTDVWARGIDVQQVSLVINYDLPTDKENYIHRI 353
>GENEDB_PFALCIPARUM|PF14_0655 [details] [associations]
symbol:PF14_0655 "RNA helicase-1, putative"
species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0000339 "RNA cap binding" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 132/342 (38%), Positives = 210/342 (61%)
Query: 106 DTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAK 165
D TE++ T F+ L +LL GI+ GFE+PS IQ+ I L G D + +A+
Sbjct: 13 DIEGNTEEIVDT----FDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQ 68
Query: 166 NGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGG 225
+GTGKTA F I +L+ I+ D Q +IL PTRELA Q +V LG +L ++ GG
Sbjct: 69 SGTGKTATFVISSLQLINYDYVACQALILAPTRELAQQIQKVVLALGDYLKVKCHACVGG 128
Query: 226 TSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQ 285
T +++DI +L Q VH++VGTPGR+ D+ K + + ++DEAD++LS F+ + +
Sbjct: 129 TVVREDIDKLKQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYE 188
Query: 286 LIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ- 343
+ + L + Q+ +FSAT P + + ++++ P I + DELTL+GI Q+Y VE+ +
Sbjct: 189 VFKKLVPDIQVALFSATMPQEILELTTRFMRDPKTILVKKDELTLEGIRQFYVAVEKEEW 248
Query: 344 KVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDF 403
K+ L L+ L I QSII+CN+ +V++L +++ ++ +H M Q R+ + +F
Sbjct: 249 KLDTLCDLYETLTITQSIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREF 308
Query: 404 RNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
R+G+ R LV TDL RGID+Q V++VIN+D P + +TY+HR+
Sbjct: 309 RSGSTRVLVTTDLLARGIDVQQVSLVINYDLPASPDTYIHRI 350
>UNIPROTKB|Q8IKF0 [details] [associations]
symbol:H45 "Helicase 45" species:36329 "Plasmodium
falciparum 3D7" [GO:0006446 "regulation of translational
initiation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 132/342 (38%), Positives = 210/342 (61%)
Query: 106 DTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAK 165
D TE++ T F+ L +LL GI+ GFE+PS IQ+ I L G D + +A+
Sbjct: 13 DIEGNTEEIVDT----FDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQ 68
Query: 166 NGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGG 225
+GTGKTA F I +L+ I+ D Q +IL PTRELA Q +V LG +L ++ GG
Sbjct: 69 SGTGKTATFVISSLQLINYDYVACQALILAPTRELAQQIQKVVLALGDYLKVKCHACVGG 128
Query: 226 TSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQ 285
T +++DI +L Q VH++VGTPGR+ D+ K + + ++DEAD++LS F+ + +
Sbjct: 129 TVVREDIDKLKQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYE 188
Query: 286 LIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ- 343
+ + L + Q+ +FSAT P + + ++++ P I + DELTL+GI Q+Y VE+ +
Sbjct: 189 VFKKLVPDIQVALFSATMPQEILELTTRFMRDPKTILVKKDELTLEGIRQFYVAVEKEEW 248
Query: 344 KVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDF 403
K+ L L+ L I QSII+CN+ +V++L +++ ++ +H M Q R+ + +F
Sbjct: 249 KLDTLCDLYETLTITQSIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREF 308
Query: 404 RNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
R+G+ R LV TDL RGID+Q V++VIN+D P + +TY+HR+
Sbjct: 309 RSGSTRVLVTTDLLARGIDVQQVSLVINYDLPASPDTYIHRI 350
>FB|FBgn0001942 [details] [associations]
symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
"Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
factor 4F complex" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
"instar larval development" evidence=TAS] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
Uniprot:Q02748
Length = 403
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 127/328 (38%), Positives = 203/328 (61%)
Query: 120 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 179
+ F+D L+ ELL GI+ GFE+PS IQ+ +I + G D++A+A++GTGKTA F I L
Sbjct: 30 DNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAIL 89
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPV 239
++ID Q +IL PTRELA Q +V LG+++ + GGT++++D L
Sbjct: 90 QQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARILESGC 149
Query: 240 HLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMF 299
H++VGTPGR+ D+ + V + + V+DEAD++LS F+ ++ + + LP + Q+++
Sbjct: 150 HVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPPDVQVILL 209
Query: 300 SATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFV-EERQKVHCLNTLFSKLQI 357
SAT P V + +++ P I + +ELTL+GI Q+Y V +E K+ L L+ L I
Sbjct: 210 SATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLCDLYDTLSI 269
Query: 358 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 417
QS+IFCN+ +V+ L ++++ ++ +H M Q R + FR+G+ R L+ TDL
Sbjct: 270 TQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLL 329
Query: 418 TRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 330 ARGIDVQQVSLVINYDLPSNRENYIHRI 357
>TAIR|locus:2088237 [details] [associations]
symbol:EIF4A1 "eukaryotic translation initiation factor
4A1" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005618 GO:GO:0046686 EMBL:CP002686 GO:GO:0005730
GO:GO:0016020 GO:GO:0048046 GO:GO:0006413 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OMA:SKRERIM
IPI:IPI00657454 RefSeq:NP_001030693.1 UniGene:At.23558
UniGene:At.28184 ProteinModelPortal:F4JEL4 SMR:F4JEL4 PRIDE:F4JEL4
EnsemblPlants:AT3G13920.2 GeneID:820605 KEGG:ath:AT3G13920
Uniprot:F4JEL4
Length = 415
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 130/326 (39%), Positives = 197/326 (60%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F+ L+ LL GI+ GFE+PS IQ+ I G D++ +A++GTGKTA FC L++
Sbjct: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQ 100
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
+D Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH+
Sbjct: 101 LDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHV 160
Query: 242 LVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSA 301
+VGTPGR+ D+ K+ + M V+DEAD++LS F+ + + + LP Q+ +FSA
Sbjct: 161 VVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 220
Query: 302 TFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVEERQ-KVHCLNTLFSKLQINQ 359
T P + K++ KP ++ DELTL+GI Q+Y VE+ + K+ L L+ L I Q
Sbjct: 221 TMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ 280
Query: 360 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 419
S+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL R
Sbjct: 281 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
Query: 420 GIDIQAVNVVINFDFPKNSETYLHRV 445
GID+Q V++VINFD P E YLHR+
Sbjct: 341 GIDVQQVSLVINFDLPTQPENYLHRI 366
>TAIR|locus:2030285 [details] [associations]
symbol:AT1G72730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009505
"plant-type cell wall" evidence=IDA] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005774
GO:GO:0009505 GO:GO:0003743 EMBL:AC010926 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
ProtClustDB:CLSN2679594 EMBL:AJ010472 EMBL:AY060592 EMBL:AY142066
EMBL:AY088176 IPI:IPI00526542 PIR:B96752 PIR:T51347
RefSeq:NP_177417.1 UniGene:At.22983 ProteinModelPortal:Q9CAI7
SMR:Q9CAI7 IntAct:Q9CAI7 STRING:Q9CAI7 PaxDb:Q9CAI7 PRIDE:Q9CAI7
EnsemblPlants:AT1G72730.1 GeneID:843605 KEGG:ath:AT1G72730
GeneFarm:940 TAIR:At1g72730 InParanoid:Q9CAI7 OMA:AVINYHI
PhylomeDB:Q9CAI7 Genevestigator:Q9CAI7 GermOnline:AT1G72730
Uniprot:Q9CAI7
Length = 414
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 137/360 (38%), Positives = 208/360 (57%)
Query: 90 DPSSQDWK--ARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQ 147
DP D K A L +T Y D + F+ L+ +LL GI+ GFE+PS IQ
Sbjct: 12 DPRQFDTKMNAILGEEGEETFYTNYDEVC---DSFDAMELQPDLLRGIYAYGFEKPSAIQ 68
Query: 148 EESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQV 207
+ I G D++ +A++GTGKTA FC L+++D Q ++L PTRELA Q +V
Sbjct: 69 QRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRELAQQIEKV 128
Query: 208 CKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLV 267
+ LG +L ++ GGTS+++D L VH++VGTPGR+ DL ++ M V
Sbjct: 129 MRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLRADAIKMFV 188
Query: 268 MDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDE 326
+DEAD++LS F+ + + + LP+ Q+ +FSAT P + K++ KP ++ DE
Sbjct: 189 LDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDE 248
Query: 327 LTLKGITQYYAFVEERQ-KVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCF 385
LTL+GI Q+Y V++ + K+ L L+ L I QS+IF N+ +V+ L K+ ++
Sbjct: 249 LTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVS 308
Query: 386 YIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V++VINFD P E YLHR+
Sbjct: 309 ATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRI 368
>UNIPROTKB|Q3SZ54 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
NextBio:20866906 Uniprot:Q3SZ54
Length = 406
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 134/361 (37%), Positives = 212/361 (58%)
Query: 92 SSQDWKARLKIPPADTRYRTEDVTATKGNE----FEDYFLKRELLMGIFEKGFERPSPIQ 147
+SQD ++R P E V + NE F+D L LL GI+ GFE+PS IQ
Sbjct: 3 ASQDSRSRDNGPDG---MEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQ 59
Query: 148 EESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQV 207
+ +I + G D++A+A++GTGKTA F I L++I+ D Q ++L PTRELA Q +V
Sbjct: 60 QRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKV 119
Query: 208 CKELGKHLNIQVMVTTGGTSLKDDIMRLYQPV-HLLVGTPGRILDLSKKGVCILKDCSML 266
LG ++ GGT+++ ++ +L H++VGTPGR+ D+ + K M
Sbjct: 120 VMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMF 179
Query: 267 VMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMD 325
V+DEAD++LS F+ + + + L +N Q+++ SAT P V + K+++ P ++ +
Sbjct: 180 VLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKE 239
Query: 326 ELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSC 384
ELTL+GI Q+Y VE E K+ L L+ L I Q++IF N+ +V+ L +K+ ++
Sbjct: 240 ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTV 299
Query: 385 FYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHR 444
+H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR
Sbjct: 300 SAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHR 359
Query: 445 V 445
+
Sbjct: 360 I 360
>UNIPROTKB|J9NY67 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
Length = 406
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 134/361 (37%), Positives = 212/361 (58%)
Query: 92 SSQDWKARLKIPPADTRYRTEDVTATKGNE----FEDYFLKRELLMGIFEKGFERPSPIQ 147
+SQD ++R P E V + NE F+D L LL GI+ GFE+PS IQ
Sbjct: 3 ASQDSRSRDNGPDG---MEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQ 59
Query: 148 EESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQV 207
+ +I + G D++A+A++GTGKTA F I L++I+ D Q ++L PTRELA Q +V
Sbjct: 60 QRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKV 119
Query: 208 CKELGKHLNIQVMVTTGGTSLKDDIMRLYQPV-HLLVGTPGRILDLSKKGVCILKDCSML 266
LG ++ GGT+++ ++ +L H++VGTPGR+ D+ + K M
Sbjct: 120 VMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMF 179
Query: 267 VMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMD 325
V+DEAD++LS F+ + + + L +N Q+++ SAT P V + K+++ P ++ +
Sbjct: 180 VLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKE 239
Query: 326 ELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSC 384
ELTL+GI Q+Y VE E K+ L L+ L I Q++IF N+ +V+ L +K+ ++
Sbjct: 240 ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTV 299
Query: 385 FYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHR 444
+H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR
Sbjct: 300 SAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHR 359
Query: 445 V 445
+
Sbjct: 360 I 360
>UNIPROTKB|P60842 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
Uniprot:P60842
Length = 406
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 134/361 (37%), Positives = 212/361 (58%)
Query: 92 SSQDWKARLKIPPADTRYRTEDVTATKGNE----FEDYFLKRELLMGIFEKGFERPSPIQ 147
+SQD ++R P E V + NE F+D L LL GI+ GFE+PS IQ
Sbjct: 3 ASQDSRSRDNGPDG---MEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQ 59
Query: 148 EESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQV 207
+ +I + G D++A+A++GTGKTA F I L++I+ D Q ++L PTRELA Q +V
Sbjct: 60 QRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKV 119
Query: 208 CKELGKHLNIQVMVTTGGTSLKDDIMRLYQPV-HLLVGTPGRILDLSKKGVCILKDCSML 266
LG ++ GGT+++ ++ +L H++VGTPGR+ D+ + K M
Sbjct: 120 VMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMF 179
Query: 267 VMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMD 325
V+DEAD++LS F+ + + + L +N Q+++ SAT P V + K+++ P ++ +
Sbjct: 180 VLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKE 239
Query: 326 ELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSC 384
ELTL+GI Q+Y VE E K+ L L+ L I Q++IF N+ +V+ L +K+ ++
Sbjct: 240 ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTV 299
Query: 385 FYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHR 444
+H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR
Sbjct: 300 SAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHR 359
Query: 445 V 445
+
Sbjct: 360 I 360
>UNIPROTKB|A6M928 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
Uniprot:A6M928
Length = 406
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 134/361 (37%), Positives = 212/361 (58%)
Query: 92 SSQDWKARLKIPPADTRYRTEDVTATKGNE----FEDYFLKRELLMGIFEKGFERPSPIQ 147
+SQD ++R P E V + NE F+D L LL GI+ GFE+PS IQ
Sbjct: 3 ASQDSRSRDNGPDG---MEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQ 59
Query: 148 EESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQV 207
+ +I + G D++A+A++GTGKTA F I L++I+ D Q ++L PTRELA Q +V
Sbjct: 60 QRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKV 119
Query: 208 CKELGKHLNIQVMVTTGGTSLKDDIMRLYQPV-HLLVGTPGRILDLSKKGVCILKDCSML 266
LG ++ GGT+++ ++ +L H++VGTPGR+ D+ + K M
Sbjct: 120 VMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMF 179
Query: 267 VMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMD 325
V+DEAD++LS F+ + + + L +N Q+++ SAT P V + K+++ P ++ +
Sbjct: 180 VLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKE 239
Query: 326 ELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSC 384
ELTL+GI Q+Y VE E K+ L L+ L I Q++IF N+ +V+ L +K+ ++
Sbjct: 240 ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTV 299
Query: 385 FYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHR 444
+H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR
Sbjct: 300 SAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHR 359
Query: 445 V 445
+
Sbjct: 360 I 360
>MGI|MGI:95303 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
Length = 406
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 134/361 (37%), Positives = 212/361 (58%)
Query: 92 SSQDWKARLKIPPADTRYRTEDVTATKGNE----FEDYFLKRELLMGIFEKGFERPSPIQ 147
+SQD ++R P E V + NE F+D L LL GI+ GFE+PS IQ
Sbjct: 3 ASQDSRSRDNGPDG---MEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQ 59
Query: 148 EESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQV 207
+ +I + G D++A+A++GTGKTA F I L++I+ D Q ++L PTRELA Q +V
Sbjct: 60 QRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKV 119
Query: 208 CKELGKHLNIQVMVTTGGTSLKDDIMRLYQPV-HLLVGTPGRILDLSKKGVCILKDCSML 266
LG ++ GGT+++ ++ +L H++VGTPGR+ D+ + K M
Sbjct: 120 VMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMF 179
Query: 267 VMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMD 325
V+DEAD++LS F+ + + + L +N Q+++ SAT P V + K+++ P ++ +
Sbjct: 180 VLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKE 239
Query: 326 ELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSC 384
ELTL+GI Q+Y VE E K+ L L+ L I Q++IF N+ +V+ L +K+ ++
Sbjct: 240 ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTV 299
Query: 385 FYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHR 444
+H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR
Sbjct: 300 SAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHR 359
Query: 445 V 445
+
Sbjct: 360 I 360
>UNIPROTKB|Q6P3V8 [details] [associations]
symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
norvegicus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
Uniprot:Q6P3V8
Length = 406
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 134/361 (37%), Positives = 212/361 (58%)
Query: 92 SSQDWKARLKIPPADTRYRTEDVTATKGNE----FEDYFLKRELLMGIFEKGFERPSPIQ 147
+SQD ++R P E V + NE F+D L LL GI+ GFE+PS IQ
Sbjct: 3 ASQDSRSRDNGPDG---MEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQ 59
Query: 148 EESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQV 207
+ +I + G D++A+A++GTGKTA F I L++I+ D Q ++L PTRELA Q +V
Sbjct: 60 QRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKV 119
Query: 208 CKELGKHLNIQVMVTTGGTSLKDDIMRLYQPV-HLLVGTPGRILDLSKKGVCILKDCSML 266
LG ++ GGT+++ ++ +L H++VGTPGR+ D+ + K M
Sbjct: 120 VMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMF 179
Query: 267 VMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMD 325
V+DEAD++LS F+ + + + L +N Q+++ SAT P V + K+++ P ++ +
Sbjct: 180 VLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKE 239
Query: 326 ELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSC 384
ELTL+GI Q+Y VE E K+ L L+ L I Q++IF N+ +V+ L +K+ ++
Sbjct: 240 ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTV 299
Query: 385 FYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHR 444
+H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR
Sbjct: 300 SAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHR 359
Query: 445 V 445
+
Sbjct: 360 I 360
>UNIPROTKB|Q8JFP1 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
Length = 407
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 125/329 (37%), Positives = 205/329 (62%)
Query: 120 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 179
+ F+D LK LL GI+ GFE+PS IQ+ +I + G D++A+A++GTGKTA F I L
Sbjct: 33 DNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISIL 92
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY-QP 238
++++ D Q ++L PTRELA Q +V LG ++ GGT++++++ +L +
Sbjct: 93 QQLEIDLKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEA 152
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
H++VGTPGR+ D+ + K M V+DEAD++LS F+ + ++ + L N Q+++
Sbjct: 153 PHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVL 212
Query: 299 FSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQ 356
SAT P+ V + K++++P ++ +ELTL+GI Q+Y VE E K+ L L+ L
Sbjct: 213 LSATMPMDVLEVTKKFMREPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLT 272
Query: 357 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL
Sbjct: 273 ITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDL 332
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 333 LARGIDVQQVSLVINYDLPTNRENYIHRI 361
>ZFIN|ZDB-GENE-031030-2 [details] [associations]
symbol:eif4a1a "eukaryotic translation initiation
factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
Uniprot:Q802C9
Length = 406
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 124/329 (37%), Positives = 203/329 (61%)
Query: 120 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 179
+ F+D L+ LL GI+ GFE+PS IQ+ +I + G D++A+A++GTGKTA F I L
Sbjct: 32 DSFDDMNLREALLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISIL 91
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPV 239
++ID + Q ++L PTRELA Q +V LG ++ GGT++++D+ +L V
Sbjct: 92 QQIDVELKATQAMVLAPTRELAQQIQKVVLALGDYMGATCHACIGGTNVRNDVQKLQADV 151
Query: 240 -HLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
H++VGTPGR+ D+ + K M +DEAD++LS F+ + ++ + L + Q+++
Sbjct: 152 PHIVVGTPGRVFDMLNRRYLSPKYIKMFALDEADEMLSRGFKDQIYEIFQKLATDTQVIL 211
Query: 299 FSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVEERQ-KVHCLNTLFSKLQ 356
SAT P V + K+++ P ++ +ELTL+GI Q+Y VE+ + K+ L L+ L
Sbjct: 212 LSATMPQEVLEVTTKFMRDPVRILVKKEELTLEGIRQFYINVEKEEWKLDTLCDLYETLT 271
Query: 357 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL
Sbjct: 272 ITQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMEQKERDVIMKEFRSGSSRVLITTDL 331
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 332 LARGIDVQQVSLVINYDLPTNRENYIHRI 360
>TAIR|locus:2020078 [details] [associations]
symbol:EIF4A-2 "eif4a-2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005774 GO:GO:0046686 EMBL:AC005287
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 EMBL:X65053
EMBL:AF386923 EMBL:AF428462 EMBL:BT008504 EMBL:AK226344
EMBL:AY087965 IPI:IPI00522023 PIR:JC1453 RefSeq:NP_175829.1
UniGene:At.195 ProteinModelPortal:P41377 SMR:P41377 STRING:P41377
PaxDb:P41377 PRIDE:P41377 ProMEX:P41377 EnsemblPlants:AT1G54270.1
GeneID:841868 KEGG:ath:AT1G54270 GeneFarm:936 TAIR:At1g54270
InParanoid:P41377 OMA:QVVWEEN PhylomeDB:P41377
ProtClustDB:CLSN2679594 Genevestigator:P41377 GermOnline:AT1G54270
Uniprot:P41377
Length = 412
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 130/327 (39%), Positives = 197/327 (60%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F+ L+ LL GI+ GFE+PS IQ+ I G D++ +A++GTGKTA FC L++
Sbjct: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQ 100
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
+D Q ++L PTRELA Q +V + LG + ++V GGTS+++D L VH+
Sbjct: 101 LDYALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHV 160
Query: 242 LVGTPGRILDLSKKGVCILKDC-SMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFS 300
+VGTPGR+ D+ ++ + DC M V+DEAD++LS F+ + + + LP Q+ +FS
Sbjct: 161 VVGTPGRVFDMLRRQ-SLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
Query: 301 ATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVEERQ-KVHCLNTLFSKLQIN 358
AT P + K++ KP ++ DELTL+GI Q+Y VE+ K+ L L+ L I
Sbjct: 220 ATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAIT 279
Query: 359 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 418
QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL
Sbjct: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
Query: 419 RGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+Q V++VINFD P E YLHR+
Sbjct: 340 RGIDVQQVSLVINFDLPTQPENYLHRI 366
>ZFIN|ZDB-GENE-040120-6 [details] [associations]
symbol:eif4a1b "eukaryotic translation initiation
factor 4A, isoform 1B" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040120-6 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 OrthoDB:EOG4640C1 EMBL:BC153507
IPI:IPI00509685 UniGene:Dr.104803 ProteinModelPortal:A8E590
SMR:A8E590 STRING:A8E590 ArrayExpress:A8E590 Uniprot:A8E590
Length = 429
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 124/329 (37%), Positives = 205/329 (62%)
Query: 120 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 179
+ F+D L+ LL GI+ GFE+PS IQ+ +I + G D++A+A++GTGKTA F I L
Sbjct: 55 DSFDDMNLRETLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISIL 114
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY-QP 238
++ID + Q ++L PTRELA Q +V LG ++ GGT++++++ +L +
Sbjct: 115 QQIDIELKGTQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEVQKLQAEA 174
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
H++VGTPGR+ D+ + K M V+DEAD++LS F+ + ++ + L + Q+++
Sbjct: 175 PHIVVGTPGRVYDMLNRKFLSSKYIKMFVLDEADEMLSRGFKDQIYEIFQKLSTSIQVVL 234
Query: 299 FSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVEERQ-KVHCLNTLFSKLQ 356
SAT P V D K++++P ++ +ELTL+GI Q+Y VE+ + K+ L L+ L
Sbjct: 235 LSATMPAEVLDVTTKFMREPVRILVKKEELTLEGIRQFYINVEKEEWKLDTLCDLYETLT 294
Query: 357 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL
Sbjct: 295 ITQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMDQKDRDLIMREFRSGSSRVLITTDL 354
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 355 LARGIDVQQVSLVINYDLPTNRENYIHRI 383
>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
symbol:eif4a2 "eukaryotic translation initiation
factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
Length = 411
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 124/329 (37%), Positives = 204/329 (62%)
Query: 120 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 179
+ F+D LK LL GI+ GFE+PS IQ+ +I + G D++A+A++GTGKTA F I L
Sbjct: 37 DNFDDMNLKETLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISIL 96
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY-QP 238
++++ + Q ++L PTRELA Q +V LG ++ GGT++++++ +L +
Sbjct: 97 QQLEIEQKETQALVLAPTRELAQQIQKVILALGDYMGASCHACIGGTNVRNEMQKLQAEA 156
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
H++VGTPGR+ D+ + K M V+DEAD++LS F+ + ++ + L N Q+++
Sbjct: 157 PHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVL 216
Query: 299 FSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQ 356
SAT P V + K++++P ++ +ELTL+GI Q+Y VE E K+ L L+ L
Sbjct: 217 LSATMPADVLEVTTKFMREPVRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLT 276
Query: 357 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL
Sbjct: 277 ITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDIIMREFRSGSSRVLITTDL 336
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 337 LARGIDVQQVSLVINYDLPTNRENYIHRI 365
>UNIPROTKB|F1P895 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
Uniprot:F1P895
Length = 406
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 125/329 (37%), Positives = 200/329 (60%)
Query: 120 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 179
+ F+D L LL GI+ GFE+PS IQ+ +I + G D++A+A++GTGKTA F I L
Sbjct: 32 DSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISIL 91
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPV 239
++I+ D Q ++L PTRELA Q +V LG ++ GGT+++ ++ +L
Sbjct: 92 QQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEA 151
Query: 240 -HLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
H++VGTPGR+ D+ + K M V+DEAD++LS F+ + + + L +N Q+++
Sbjct: 152 PHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVL 211
Query: 299 FSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQ 356
SAT P V + K+++ P ++ +ELTL+GI Q+Y VE E K+ L L+ L
Sbjct: 212 LSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLT 271
Query: 357 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL
Sbjct: 272 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDL 331
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 332 LARGIDVQQVSLVINYDLPTNRENYIHRI 360
>TAIR|locus:2008296 [details] [associations]
symbol:AT1G51380 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005730 EMBL:AC024261
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 EMBL:AC006085 KO:K13025
EMBL:AY058890 EMBL:AY079046 IPI:IPI00529522 PIR:H96551
RefSeq:NP_175549.1 UniGene:At.11244 ProteinModelPortal:Q9C8J1
SMR:Q9C8J1 PaxDb:Q9C8J1 PRIDE:Q9C8J1 EnsemblPlants:AT1G51380.1
GeneID:841562 KEGG:ath:AT1G51380 GeneFarm:1010 TAIR:At1g51380
InParanoid:Q9C8J1 OMA:DITNITH PhylomeDB:Q9C8J1
ProtClustDB:CLSN2912843 Genevestigator:Q9C8J1 GermOnline:AT1G51380
Uniprot:Q9C8J1
Length = 392
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 123/335 (36%), Positives = 205/335 (61%)
Query: 117 TKG----NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTA 172
TKG F+D + ++L G+++ G+++PS IQ+ ++ L G D++A+A++GTGKT+
Sbjct: 15 TKGIKPIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTS 74
Query: 173 AFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDI 232
I + ++ + +QV++L P+RELA QT + + +G H NIQ GG S+ +DI
Sbjct: 75 MIAISVCQIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDI 134
Query: 233 MRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPA 292
+L + VH + GTPGR+ D+ K+G K +LV+DE+D++LS + + + R LP
Sbjct: 135 KKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPH 194
Query: 293 NRQILMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ-KVHCLNT 350
+ Q+ + SAT P + + +K++ P I + DELTL+GI QYY V++ + K L
Sbjct: 195 DIQVCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLCD 254
Query: 351 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRN 410
L+ +L INQ+IIFCN+ +V+ L +K+ + +H Q R+ + + FR+ R
Sbjct: 255 LYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRV 314
Query: 411 LVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
L+ +D++ RGID+Q V+ VIN+D P N E Y+HR+
Sbjct: 315 LIASDVWARGIDVQTVSHVINYDIPNNPELYIHRI 349
>DICTYBASE|DDB_G0269932 [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0000348 "mRNA
branch site recognition" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269932
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0005681 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12812 GO:GO:0000348 RefSeq:XP_646415.1
ProteinModelPortal:Q55CR6 SMR:Q55CR6 PRIDE:Q55CR6
EnsemblProtists:DDB0233387 GeneID:8617372 KEGG:ddi:DDB_G0269932
InParanoid:Q55CR6 OMA:GGANMNP ProtClustDB:CLSZ2429041
Uniprot:Q55CR6
Length = 428
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 140/383 (36%), Positives = 219/383 (57%)
Query: 69 PGADSSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLK 128
P D S + E E+ +S+ V D K + T R + A + F ++ LK
Sbjct: 6 PEVDISELAEYEE--ESDEEVQNDVTDTKNK-------TANRADTHVAMHSSGFREFLLK 56
Query: 129 RELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNV 188
EL I + GFE PS +Q E IP A+ G+D++ +AK+G GKTA F + L++ID + N
Sbjct: 57 PELERVIGDCGFEHPSEVQNECIPQAILGTDVICQAKSGMGKTAVFVLSTLQQIDNNPNG 116
Query: 189 IQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKD--DIMRLYQPVHLLVGT 245
I ++L TRELA Q K+L N++ V GG ++ D+++ +P ++++GT
Sbjct: 117 ITTLVLCNTRELAYQICDEFDRFTKYLPNVKTAVIYGGIPVQTHKDLIKEKKP-NIIIGT 175
Query: 246 PGRILDLSKKGVCILKDCSMLVMDEADKLL-SPEFQPSVEQLIRFLPANRQILMFSATFP 304
PGRIL L+ +G LK+ ++DE D +L S + + V+++ + +PAN+Q++MFSAT
Sbjct: 176 PGRILQLASEGALSLKEIKQFILDECDTMLESLDMRKDVQKIFKLIPANKQVMMFSATLS 235
Query: 305 VTVKDFKDKYLQKPYVINLMD--ELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSII 362
T++ K++ P I + D +LTL G+ QYY + E QK L L L NQ++I
Sbjct: 236 DTIRPICKKFMNNPLEIYINDGSKLTLHGLQQYYVPITEEQKNKKLIELLDSLDFNQAVI 295
Query: 363 FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 422
F SV R + L K + ++G+ IH + Q R + F+N R +V T++F RGID
Sbjct: 296 FVKSVRRADALNKILQDIGFPSICIHRDLDQKDRIEQYRKFKNFESRIMVATNIFGRGID 355
Query: 423 IQAVNVVINFDFPKNSETYLHRV 445
I+ VNVVIN+D ++++TYLHRV
Sbjct: 356 IERVNVVINYDMAESADTYLHRV 378
>UNIPROTKB|I3LLD5 [details] [associations]
symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
Uniprot:I3LLD5
Length = 401
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 130/342 (38%), Positives = 202/342 (59%)
Query: 110 RTEDVTATKGNE----FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAK 165
R E V + NE F+D L LL GI+ GFE+PS IQ+ +I + G D++A+A+
Sbjct: 18 RPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQ 77
Query: 166 NGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGG 225
+GTGKTA F I L++I+ D Q ++L PTRELA Q +V LG ++ GG
Sbjct: 78 SGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGG 137
Query: 226 TSLKDDIMRLYQPV-HLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVE 284
T+++ ++ +L H++VGTPGR+ D+ + K M V+DEAD++LS F+ +
Sbjct: 138 TNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIY 197
Query: 285 QLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVE-ERQ 343
+ + L +N Q+++ SAT P V + K+++ P I L TL+GI Q+Y VE E
Sbjct: 198 DIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRIXL----TLEGIRQFYINVEREEW 253
Query: 344 KVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDF 403
K+ L L+ L I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +F
Sbjct: 254 KLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREF 313
Query: 404 RNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
R+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 314 RSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRI 355
>WB|WBGene00001840 [details] [associations]
symbol:hel-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0001703 "gastrulation with mouth
forming first" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0008380
GO:GO:0006397 GO:GO:0010171 GO:GO:0005681 GO:GO:0003723
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:NAENPAI EMBL:Z54327 EMBL:U08102
PIR:T19484 RefSeq:NP_001021985.1 ProteinModelPortal:Q18212
SMR:Q18212 STRING:Q18212 PaxDb:Q18212 PRIDE:Q18212
EnsemblMetazoa:C26D10.2a.1 EnsemblMetazoa:C26D10.2a.2 GeneID:174333
KEGG:cel:CELE_C26D10.2 UCSC:C26D10.2a CTD:174333 WormBase:C26D10.2a
InParanoid:Q18212 NextBio:883586 ArrayExpress:Q18212 GO:GO:0001703
Uniprot:Q18212
Length = 425
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 133/371 (35%), Positives = 213/371 (57%)
Query: 83 VQSEAAVDPSSQDWKARLKIPPA---DTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKG 139
++ E +D + + + K P D R + + F D+ LK E+L I + G
Sbjct: 1 MEEEQLLDYEEEQEEIQDKQPEVGGGDARKTKGTYASIHSSGFRDFLLKPEILRAIGDCG 60
Query: 140 FERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRE 199
FE PS +Q E IP A+ G D++ +AK+G GKTA F I L++++ + + VV + TRE
Sbjct: 61 FEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRE 120
Query: 200 LALQTSQVCKELGKHL-NIQVMVTTGGTSLKDDIMRLYQPV-HLLVGTPGRILDLSKKGV 257
LA Q S+ + K+L ++V V GG ++K D RL H++VGTPGR+L L++ G
Sbjct: 121 LAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGK 180
Query: 258 CILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQ 316
L V+DE DK++ + + V+++++ P +Q++MFSAT P ++ +++Q
Sbjct: 181 LKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFMQ 240
Query: 317 KPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLA 374
P + + DE LTL G+ Q+Y ++E +K L L L+ NQ +IF +V R E L
Sbjct: 241 DPMEVYVDDEAKLTLHGLQQHYVKLKEAEKNRRLLNLLDALEFNQVVIFVKAVKRCEALH 300
Query: 375 KKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDF 434
+ +TE + IH +M Q+ R + F++ R LV TDLF RG+DI+ VN+V N+D
Sbjct: 301 QLLTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDM 360
Query: 435 PKNSETYLHRV 445
P++S++YLHRV
Sbjct: 361 PEDSDSYLHRV 371
>GENEDB_PFALCIPARUM|PFB0445c [details] [associations]
symbol:PFB0445c "helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 GenomeReviews:AE001362_GR HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K12812
ProtClustDB:CLSZ2429041 PIR:G71614 RefSeq:XP_001349607.1
ProteinModelPortal:Q9TY94 SMR:Q9TY94 EnsemblProtists:PFB0445c:mRNA
GeneID:812689 KEGG:pfa:PFB0445c EuPathDB:PlasmoDB:PF3D7_0209800
OMA:LECVINY Uniprot:Q9TY94
Length = 457
Score = 426 (155.0 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 101/268 (37%), Positives = 147/268 (54%)
Query: 185 DNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDDIMRLYQP---VH 240
DN ++ + L TRELA Q K+L N++ V GG S+ I +L++ H
Sbjct: 140 DNKFVRCLGLAHTRELAYQIKNEFDRFSKYLKNVRCEVVYGGISMNKHI-KLFKEDNIPH 198
Query: 241 LLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQILMF 299
+++GTPGRIL L ++ I V+DE DK L + + V+++ P +Q++ F
Sbjct: 199 IIIGTPGRILALIREKYLITDKIQHFVLDECDKCLEKLDMRSDVQKIFISTPLKKQVMFF 258
Query: 300 SATFPVTVKDFKDKYLQKPYVINLMDELTLK--GITQYYAFVEERQKVHCLNTLFSKLQI 357
SAT ++D K+LQ P I + DE LK G+ Q+Y ++E+ K L + L+
Sbjct: 259 SATMAKEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQHYVKLQEKDKTRKLIEILDALEF 318
Query: 358 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 417
NQ IIF SV R L K +TE + IH + Q R + F+ R LV TDLF
Sbjct: 319 NQVIIFVKSVTRAITLDKLLTECNFPSIAIHGGLEQQERIERYDKFKKFENRILVSTDLF 378
Query: 418 TRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGIDI+ VN+VIN+D P+NS++YLHRV
Sbjct: 379 GRGIDIERVNIVINYDMPENSDSYLHRV 406
Score = 195 (73.7 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 36/66 (54%), Positives = 50/66 (75%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F+D+FLK ELL I E GFE PS +Q+E+IP A+TG+DIL +AK+G GKTA F + L++
Sbjct: 57 FKDFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQ 116
Query: 182 IDQDNN 187
+D + N
Sbjct: 117 LDTNEN 122
>UNIPROTKB|Q9TY94 [details] [associations]
symbol:UAP56 "DEAD box helicase, UAP56" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 GenomeReviews:AE001362_GR HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K12812
ProtClustDB:CLSZ2429041 PIR:G71614 RefSeq:XP_001349607.1
ProteinModelPortal:Q9TY94 SMR:Q9TY94 EnsemblProtists:PFB0445c:mRNA
GeneID:812689 KEGG:pfa:PFB0445c EuPathDB:PlasmoDB:PF3D7_0209800
OMA:LECVINY Uniprot:Q9TY94
Length = 457
Score = 426 (155.0 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 101/268 (37%), Positives = 147/268 (54%)
Query: 185 DNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDDIMRLYQP---VH 240
DN ++ + L TRELA Q K+L N++ V GG S+ I +L++ H
Sbjct: 140 DNKFVRCLGLAHTRELAYQIKNEFDRFSKYLKNVRCEVVYGGISMNKHI-KLFKEDNIPH 198
Query: 241 LLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQILMF 299
+++GTPGRIL L ++ I V+DE DK L + + V+++ P +Q++ F
Sbjct: 199 IIIGTPGRILALIREKYLITDKIQHFVLDECDKCLEKLDMRSDVQKIFISTPLKKQVMFF 258
Query: 300 SATFPVTVKDFKDKYLQKPYVINLMDELTLK--GITQYYAFVEERQKVHCLNTLFSKLQI 357
SAT ++D K+LQ P I + DE LK G+ Q+Y ++E+ K L + L+
Sbjct: 259 SATMAKEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQHYVKLQEKDKTRKLIEILDALEF 318
Query: 358 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 417
NQ IIF SV R L K +TE + IH + Q R + F+ R LV TDLF
Sbjct: 319 NQVIIFVKSVTRAITLDKLLTECNFPSIAIHGGLEQQERIERYDKFKKFENRILVSTDLF 378
Query: 418 TRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGIDI+ VN+VIN+D P+NS++YLHRV
Sbjct: 379 GRGIDIERVNIVINYDMPENSDSYLHRV 406
Score = 195 (73.7 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 36/66 (54%), Positives = 50/66 (75%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F+D+FLK ELL I E GFE PS +Q+E+IP A+TG+DIL +AK+G GKTA F + L++
Sbjct: 57 FKDFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQ 116
Query: 182 IDQDNN 187
+D + N
Sbjct: 117 LDTNEN 122
>UNIPROTKB|Q3SZ65 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
Length = 407
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 123/329 (37%), Positives = 203/329 (61%)
Query: 120 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 179
+ F+D LK LL GI+ GFE+PS IQ+ +I + G D++A+A++GTGKTA F I L
Sbjct: 33 DNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISIL 92
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY-QP 238
++++ + Q ++L PTRELA Q +V LG ++ GGT++++++ +L +
Sbjct: 93 QQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEA 152
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
H++VGTPGR+ D+ + K M V+DEAD++LS F+ + ++ + L + Q+++
Sbjct: 153 PHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVL 212
Query: 299 FSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQ 356
SAT P V + K+++ P ++ +ELTL+GI Q+Y VE E K+ L L+ L
Sbjct: 213 LSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLT 272
Query: 357 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL
Sbjct: 273 ITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDL 332
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 333 LARGIDVQQVSLVINYDLPTNRENYIHRI 361
>UNIPROTKB|E2R3J1 [details] [associations]
symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
Length = 407
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 123/329 (37%), Positives = 203/329 (61%)
Query: 120 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 179
+ F+D LK LL GI+ GFE+PS IQ+ +I + G D++A+A++GTGKTA F I L
Sbjct: 33 DNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISIL 92
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY-QP 238
++++ + Q ++L PTRELA Q +V LG ++ GGT++++++ +L +
Sbjct: 93 QQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEA 152
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
H++VGTPGR+ D+ + K M V+DEAD++LS F+ + ++ + L + Q+++
Sbjct: 153 PHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVL 212
Query: 299 FSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQ 356
SAT P V + K+++ P ++ +ELTL+GI Q+Y VE E K+ L L+ L
Sbjct: 213 LSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLT 272
Query: 357 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL
Sbjct: 273 ITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDL 332
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 333 LARGIDVQQVSLVINYDLPTNRENYIHRI 361
>UNIPROTKB|Q14240 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
"helicase activity" evidence=TAS] [GO:0006446 "regulation of
translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
translation initiation factor 4F complex" evidence=TAS] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
Length = 407
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 123/329 (37%), Positives = 203/329 (61%)
Query: 120 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 179
+ F+D LK LL GI+ GFE+PS IQ+ +I + G D++A+A++GTGKTA F I L
Sbjct: 33 DNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISIL 92
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY-QP 238
++++ + Q ++L PTRELA Q +V LG ++ GGT++++++ +L +
Sbjct: 93 QQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEA 152
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
H++VGTPGR+ D+ + K M V+DEAD++LS F+ + ++ + L + Q+++
Sbjct: 153 PHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVL 212
Query: 299 FSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQ 356
SAT P V + K+++ P ++ +ELTL+GI Q+Y VE E K+ L L+ L
Sbjct: 213 LSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLT 272
Query: 357 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL
Sbjct: 273 ITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDL 332
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 333 LARGIDVQQVSLVINYDLPTNRENYIHRI 361
>UNIPROTKB|A6M930 [details] [associations]
symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
Uniprot:A6M930
Length = 407
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 123/329 (37%), Positives = 203/329 (61%)
Query: 120 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 179
+ F+D LK LL GI+ GFE+PS IQ+ +I + G D++A+A++GTGKTA F I L
Sbjct: 33 DNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISIL 92
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY-QP 238
++++ + Q ++L PTRELA Q +V LG ++ GGT++++++ +L +
Sbjct: 93 QQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEA 152
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
H++VGTPGR+ D+ + K M V+DEAD++LS F+ + ++ + L + Q+++
Sbjct: 153 PHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVL 212
Query: 299 FSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQ 356
SAT P V + K+++ P ++ +ELTL+GI Q+Y VE E K+ L L+ L
Sbjct: 213 LSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLT 272
Query: 357 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL
Sbjct: 273 ITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDL 332
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 333 LARGIDVQQVSLVINYDLPTNRENYIHRI 361
>UNIPROTKB|F1SCH3 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:WANCVIS EMBL:FP103015
Ensembl:ENSSSCT00000015052 Uniprot:F1SCH3
Length = 475
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 139/383 (36%), Positives = 218/383 (56%)
Query: 70 GADSSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTE-DVTATKGNEFEDYFLK 128
G + I E+ V++E ++ +A + PA + + + + F D+ LK
Sbjct: 41 GGEREISVMAEQDVENELLDYEEDEEPQAPPENAPAPPKKDVKGSYVSIHSSGFRDFLLK 100
Query: 129 RELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNV 188
ELL I + GFE PS +Q E IP A+ G D+L +AK+G GKTA F + L++I+ N
Sbjct: 101 PELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQ 160
Query: 189 IQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDD--IMRLYQPVHLLVGT 245
+ V+++ TRELA Q S+ + K++ +++V V GG S+K D +++ P H++VGT
Sbjct: 161 VTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCP-HVVVGT 219
Query: 246 PGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQILMFSATFP 304
PGRIL L + LK+ V+DE DK+L + + V+++ R P +Q +MFSAT
Sbjct: 220 PGRILALVRNRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLS 279
Query: 305 VTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSII 362
++ K++Q P + + DE LTL G+ QYY +++ +K L L L+ NQ +I
Sbjct: 280 KEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVI 339
Query: 363 FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 422
F SV R LA+ + E + IH M Q+ R + F++ R LV T+LF RG+D
Sbjct: 340 FVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMD 399
Query: 423 IQAVNVVINFDFPKNSETYLHRV 445
I+ VN+V N+D P++S+TYLHRV
Sbjct: 400 IERVNIVFNYDMPEDSDTYLHRV 422
>MGI|MGI:106906 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
GermOnline:ENSMUSG00000022884 Uniprot:P10630
Length = 407
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 123/329 (37%), Positives = 203/329 (61%)
Query: 120 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 179
+ F+D LK LL GI+ GFE+PS IQ+ +I + G D++A+A++GTGKTA F I L
Sbjct: 33 DNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISIL 92
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY-QP 238
++++ + Q ++L PTRELA Q +V LG ++ GGT++++++ +L +
Sbjct: 93 QQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEA 152
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
H++VGTPGR+ D+ + K M V+DEAD++LS F+ + ++ + L + Q+++
Sbjct: 153 PHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVL 212
Query: 299 FSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQ 356
SAT P V + K+++ P ++ +ELTL+GI Q+Y VE E K+ L L+ L
Sbjct: 213 LSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLT 272
Query: 357 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL
Sbjct: 273 ITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDL 332
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 333 LARGIDVQQVSLVINYDLPTNRENYIHRI 361
>RGD|1309225 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
Length = 407
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 123/329 (37%), Positives = 203/329 (61%)
Query: 120 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 179
+ F+D LK LL GI+ GFE+PS IQ+ +I + G D++A+A++GTGKTA F I L
Sbjct: 33 DNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISIL 92
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY-QP 238
++++ + Q ++L PTRELA Q +V LG ++ GGT++++++ +L +
Sbjct: 93 QQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEA 152
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
H++VGTPGR+ D+ + K M V+DEAD++LS F+ + ++ + L + Q+++
Sbjct: 153 PHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVL 212
Query: 299 FSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQ 356
SAT P V + K+++ P ++ +ELTL+GI Q+Y VE E K+ L L+ L
Sbjct: 213 LSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLT 272
Query: 357 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL
Sbjct: 273 ITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDL 332
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 333 LARGIDVQQVSLVINYDLPTNRENYIHRI 361
>UNIPROTKB|F8WFX2 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
Length = 408
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 123/329 (37%), Positives = 203/329 (61%)
Query: 120 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 179
+ F+D LK LL GI+ GFE+PS IQ+ +I + G D++A+A++GTGKTA F I L
Sbjct: 34 DNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISIL 93
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY-QP 238
++++ + Q ++L PTRELA Q +V LG ++ GGT++++++ +L +
Sbjct: 94 QQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEA 153
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
H++VGTPGR+ D+ + K M V+DEAD++LS F+ + ++ + L + Q+++
Sbjct: 154 PHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVL 213
Query: 299 FSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQ 356
SAT P V + K+++ P ++ +ELTL+GI Q+Y VE E K+ L L+ L
Sbjct: 214 LSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLT 273
Query: 357 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL
Sbjct: 274 ITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDL 333
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+Q V++VIN+D P N E Y+HR+
Sbjct: 334 LARGIDVQQVSLVINYDLPTNRENYIHRI 362
>MGI|MGI:1915528 [details] [associations]
symbol:Ddx39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915528 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX EMBL:AK088894 EMBL:AK145927 EMBL:AK146294
EMBL:AK150997 EMBL:AK162752 EMBL:AK168079 EMBL:BC020134
IPI:IPI00123878 IPI:IPI00553461 RefSeq:NP_932099.2 UniGene:Mm.28222
ProteinModelPortal:Q8VDW0 SMR:Q8VDW0 STRING:Q8VDW0
PhosphoSite:Q8VDW0 PaxDb:Q8VDW0 PRIDE:Q8VDW0
Ensembl:ENSMUST00000019576 Ensembl:ENSMUST00000109810
Ensembl:ENSMUST00000172396 GeneID:68278 KEGG:mmu:68278
UCSC:uc008chc.2 CTD:68278 GeneTree:ENSGT00660000095549
InParanoid:Q8VDW0 OMA:WANCVIS NextBio:326910 Bgee:Q8VDW0
CleanEx:MM_DDX39 Genevestigator:Q8VDW0
GermOnline:ENSMUSG00000005481 Uniprot:Q8VDW0
Length = 427
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 136/373 (36%), Positives = 216/373 (57%)
Query: 80 EKTVQSEAAVDPSSQDWKARLKIPPADTRYRTE-DVTATKGNEFEDYFLKRELLMGIFEK 138
E+ V++E ++ +A + PA + + + + F D+ LK ELL I +
Sbjct: 3 EQDVENELLDYDEDEEPQAPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 139 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTR 198
GFE PS +Q E IP A+ G D+L +AK+G GKTA F + L++I+ N + V+++ TR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCHTR 122
Query: 199 ELALQTSQVCKELGKHL-NIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLSKK 255
ELA Q S+ + K++ +++V V GG S+K +D+++ P H++VGTPGRIL L +
Sbjct: 123 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCP-HVVVGTPGRILALVRS 181
Query: 256 GVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKY 314
L++ V+DE DK+L + + V+++ R P +Q +MFSAT ++ K+
Sbjct: 182 RSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKF 241
Query: 315 LQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVEL 372
+Q P + + DE LTL G+ QYY +++ +K L L L+ NQ +IF SV R
Sbjct: 242 MQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMA 301
Query: 373 LAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINF 432
LA+ + E + IH M Q+ R + F++ R LV T+LF RG+DI+ VN+V N+
Sbjct: 302 LAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNY 361
Query: 433 DFPKNSETYLHRV 445
D P++S+TYLHRV
Sbjct: 362 DMPEDSDTYLHRV 374
>UNIPROTKB|E2QY95 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006406 "mRNA export from nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:10212
KO:K13182 GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:AAEX03012368 RefSeq:XP_533895.2 Ensembl:ENSCAFT00000025943
GeneID:476689 KEGG:cfa:476689 NextBio:20852303 Uniprot:E2QY95
Length = 427
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 137/373 (36%), Positives = 215/373 (57%)
Query: 80 EKTVQSEAAVDPSSQDWKARLKIPPADTRYRTE-DVTATKGNEFEDYFLKRELLMGIFEK 138
E+ V++E ++ +A + PA + + + + F D+ LK ELL I +
Sbjct: 3 EQDVENELLDYEEDEEPQAPPESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 139 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTR 198
GFE PS +Q E IP A+ G D+L +AK+G GKTA F + L++I+ N + V+++ TR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTR 122
Query: 199 ELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDD--IMRLYQPVHLLVGTPGRILDLSKK 255
ELA Q S+ + K++ +++V V GG S+K D +++ P H++VGTPGRIL L +
Sbjct: 123 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCP-HVVVGTPGRILALVRN 181
Query: 256 GVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKY 314
LK+ V+DE DK+L + + V+++ R P +Q +MFSAT ++ K+
Sbjct: 182 RSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKF 241
Query: 315 LQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVEL 372
+Q P + + DE LTL G+ QYY +++ +K L L L+ NQ +IF SV R
Sbjct: 242 MQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMA 301
Query: 373 LAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINF 432
LA+ + E + IH M Q+ R + F++ R LV T+LF RG+DI+ VN+V N+
Sbjct: 302 LAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNY 361
Query: 433 DFPKNSETYLHRV 445
D P++S+TYLHRV
Sbjct: 362 DMPEDSDTYLHRV 374
>UNIPROTKB|E7EQG2 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:AC112907 HGNC:HGNC:3284 ChiTaRS:EIF4A2
IPI:IPI00924536 ProteinModelPortal:E7EQG2 SMR:E7EQG2 PRIDE:E7EQG2
Ensembl:ENST00000425053 ArrayExpress:E7EQG2 Bgee:E7EQG2
Uniprot:E7EQG2
Length = 362
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 123/328 (37%), Positives = 202/328 (61%)
Query: 120 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 179
+ F+D LK LL GI+ GFE+PS IQ+ +I + G D++A+A++GTGKTA F I L
Sbjct: 33 DNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISIL 92
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY-QP 238
++++ + Q ++L PTRELA Q +V LG ++ GGT++++++ +L +
Sbjct: 93 QQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEA 152
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
H++VGTPGR+ D+ + K M V+DEAD++LS F+ + ++ + L + Q+++
Sbjct: 153 PHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVL 212
Query: 299 FSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQ 356
SAT P V + K+++ P ++ +ELTL+GI Q+Y VE E K+ L L+ L
Sbjct: 213 LSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLT 272
Query: 357 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL
Sbjct: 273 ITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDL 332
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHR 444
RGID+Q V++VIN+D P N E Y+HR
Sbjct: 333 LARGIDVQQVSLVINYDLPTNRENYIHR 360
>UNIPROTKB|O00148 [details] [associations]
symbol:DDX39A "ATP-dependent RNA helicase DDX39A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006406 "mRNA export from
nucleus" evidence=IGI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:U90426 EMBL:AK026614 EMBL:BC001009
IPI:IPI00940237 RefSeq:NP_005795.2 UniGene:Hs.311609
ProteinModelPortal:O00148 SMR:O00148 IntAct:O00148
MINT:MINT-1035991 STRING:O00148 PhosphoSite:O00148 PaxDb:O00148
PeptideAtlas:O00148 PRIDE:O00148 DNASU:10212
Ensembl:ENST00000242776 GeneID:10212 KEGG:hsa:10212 UCSC:uc002myo.3
CTD:10212 GeneCards:GC19M014521 HGNC:HGNC:17821 neXtProt:NX_O00148
PharmGKB:PA27226 HOVERGEN:HBG107334 InParanoid:O00148 KO:K13182
OrthoDB:EOG4XSKPX PhylomeDB:O00148 ChiTaRS:DDX39A GenomeRNAi:10212
NextBio:38664 ArrayExpress:O00148 Bgee:O00148 CleanEx:HS_DDX39
Genevestigator:O00148 GermOnline:ENSG00000123136 Uniprot:O00148
Length = 427
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 132/330 (40%), Positives = 198/330 (60%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F D+ LK ELL I + GFE PS +Q E IP A+ G D+L +AK+G GKTA F + L++
Sbjct: 46 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 105
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDD--IMRLYQP 238
I+ N + V+++ TRELA Q S+ + K++ +++V V GG S+K D +++ P
Sbjct: 106 IEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCP 165
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQIL 297
H++VGTPGRIL L + LK+ V+DE DK+L + + V+++ R P +Q +
Sbjct: 166 -HVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCM 224
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKL 355
MFSAT ++ K++Q P + + DE LTL G+ QYY +++ +K L L L
Sbjct: 225 MFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVL 284
Query: 356 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 415
+ NQ IIF SV R LA+ + E + IH M Q+ R + F++ R LV T+
Sbjct: 285 EFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATN 344
Query: 416 LFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
LF RG+DI+ VN+V N+D P++S+TYLHRV
Sbjct: 345 LFGRGMDIERVNIVFNYDMPEDSDTYLHRV 374
>RGD|619920 [details] [associations]
symbol:Ddx39a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 EMBL:AF063447 RGD:619920
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:BC086328 IPI:IPI00325144 RefSeq:NP_446015.2 UniGene:Rn.161716
ProteinModelPortal:Q5U216 SMR:Q5U216 STRING:Q5U216 PRIDE:Q5U216
Ensembl:ENSRNOT00000045974 GeneID:89827 KEGG:rno:89827
InParanoid:Q5U216 NextBio:617744 Genevestigator:Q5U216
GermOnline:ENSRNOG00000004373 Uniprot:Q5U216
Length = 427
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 130/330 (39%), Positives = 199/330 (60%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F D+ LK ELL I + GFE PS +Q E IP A+ G D+L +AK+G GKTA F + L++
Sbjct: 46 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 105
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLK--DDIMRLYQP 238
I+ N + V+++ TRELA Q S+ + K++ +++V V GG S+K +D+++ P
Sbjct: 106 IEPINGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCP 165
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQIL 297
H++VGTPGRIL L + L++ V+DE DK+L + + V+++ R P +Q +
Sbjct: 166 -HVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCM 224
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKL 355
MFSAT ++ K++Q P + + DE LTL G+ QYY +++ +K L L L
Sbjct: 225 MFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVL 284
Query: 356 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 415
+ NQ +IF SV R LA+ + E + IH M Q+ R + F++ R LV T+
Sbjct: 285 EFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATN 344
Query: 416 LFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
LF RG+DI+ VN+V N+D P++S+TYLHRV
Sbjct: 345 LFGRGMDIERVNIVFNYDMPEDSDTYLHRV 374
>ZFIN|ZDB-GENE-040426-1259 [details] [associations]
symbol:ddx39b "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39B" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-1259 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX511233
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 KO:K12812
OMA:NNPLINC EMBL:FP085397 EMBL:BC055240 IPI:IPI00502330
RefSeq:NP_957237.1 UniGene:Dr.5423 SMR:Q7SXU7 STRING:Q7SXU7
Ensembl:ENSDART00000052355 GeneID:393917 KEGG:dre:393917 CTD:393917
InParanoid:Q7SXU7 NextBio:20814893 Uniprot:Q7SXU7
Length = 435
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 129/330 (39%), Positives = 197/330 (59%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F D+ LK ELL I + GFE PS +Q E IP A+ G D+L +AK+G GKTA F + L++
Sbjct: 54 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 113
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDD--IMRLYQP 238
++ + V+++ TRELA Q S+ + K++ +++V V GG S+K D +++ P
Sbjct: 114 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKESP 173
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQIL 297
H++VGTPGRIL LS+ L+ ++DE DK+L + + V+++ R P +Q++
Sbjct: 174 -HVVVGTPGRILALSRNKSLNLRHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVM 232
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKL 355
MFSAT ++ K++Q P I + DE LTL G+ QYY +++ +K L L L
Sbjct: 233 MFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVL 292
Query: 356 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 415
+ NQ +IF SV R LA+ + E + IH M QD R + F++ R LV T+
Sbjct: 293 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRAMPQDERLARYQQFKDFQRRILVATN 352
Query: 416 LFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
LF RG+DI+ VN+ N+D P++S+TYLHRV
Sbjct: 353 LFGRGMDIERVNIAFNYDMPEDSDTYLHRV 382
>UNIPROTKB|Q5E970 [details] [associations]
symbol:DDX39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
isoform 1" species:9913 "Bos taurus" [GO:0006406 "mRNA export from
nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334
KO:K13182 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
OMA:WANCVIS EMBL:DAAA02019335 EMBL:BT021050 IPI:IPI00700228
RefSeq:NP_001029924.1 UniGene:Bt.29896 SMR:Q5E970 STRING:Q5E970
Ensembl:ENSBTAT00000029088 GeneID:614215 KEGG:bta:614215
InParanoid:Q5E970 NextBio:20899000 Uniprot:Q5E970
Length = 427
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 133/349 (38%), Positives = 203/349 (58%)
Query: 103 PPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILA 162
PP + + + F D+ LK ELL I + GFE PS +Q E IP A+ G DIL
Sbjct: 27 PPPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILC 86
Query: 163 RAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMV 221
+AK+G GKTA F + L++I+ N + V+++ TRELA Q S+ + K++ +++V V
Sbjct: 87 QAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSV 146
Query: 222 TTGGTSLKDD--IMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-E 278
GG S+K D +++ P H++VGTPGRIL L + L++ V+DE DK+L +
Sbjct: 147 FFGGLSIKKDEEVLKRNCP-HVVVGTPGRILALVRNRSLNLRNVKHFVLDECDKMLEQLD 205
Query: 279 FQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYY 336
+ V+++ R P +Q +MFSAT ++ K++Q P + + DE LTL G+ QYY
Sbjct: 206 MRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYY 265
Query: 337 AFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHR 396
+++ +K L L L+ NQ +IF SV R LA+ + E + IH M Q+ R
Sbjct: 266 VKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEER 325
Query: 397 NRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
+ F++ R LV T+LF RG+DI+ VN+V N+D P++S+TYLHRV
Sbjct: 326 LSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRV 374
>UNIPROTKB|Q5WR10 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9615 "Canis lupus familiaris" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA]
[GO:0030621 "U4 snRNA binding" evidence=IEA] [GO:0017070 "U6 snRNA
binding" evidence=IEA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IEA] [GO:0005688 "U6 snRNP" evidence=IEA]
[GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:AY423389
RefSeq:NP_001014399.1 UniGene:Cfa.10131 ProteinModelPortal:Q5WR10
SMR:Q5WR10 Ensembl:ENSCAFT00000036511 GeneID:474839 KEGG:cfa:474839
InParanoid:Q5WR10 NextBio:20850784 Uniprot:Q5WR10
Length = 428
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 138/380 (36%), Positives = 214/380 (56%)
Query: 72 DSSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKREL 131
D+ ++D E V++ A D S K +K + + F D+ LK EL
Sbjct: 7 DNELLDYEEDEVETAAGGDGSEAPAKKDVK----------GSYVSIHSSGFRDFLLKPEL 56
Query: 132 LMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQV 191
L I + GFE PS +Q E IP A+ G D+L +AK+G GKTA F + L++++ + V
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 192 VILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDD--IMRLYQPVHLLVGTPGR 248
+++ TRELA Q S+ + K++ N++V V GG S+K D +++ P H++VGTPGR
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP-HIVVGTPGR 175
Query: 249 ILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQILMFSATFPVTV 307
IL L++ LK ++DE DK+L + + V+++ R P +Q++MFSAT +
Sbjct: 176 ILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEI 235
Query: 308 KDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCN 365
+ K++Q P I + DE LTL G+ QYY +++ +K L L L+ NQ +IF
Sbjct: 236 RPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVK 295
Query: 366 SVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQA 425
SV R LA+ + E + IH M Q+ R + F++ R LV T+LF RG+DI+
Sbjct: 296 SVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIER 355
Query: 426 VNVVINFDFPKNSETYLHRV 445
VN+ N+D P++S+TYLHRV
Sbjct: 356 VNIAFNYDMPEDSDTYLHRV 375
>UNIPROTKB|Q13838 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006406 "mRNA export from nucleus"
evidence=IGI;IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0000346 "transcription export complex"
evidence=IDA] [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008380 "RNA splicing" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0043008
"ATP-dependent protein binding" evidence=IDA] [GO:0005687 "U4
snRNP" evidence=IDA] [GO:0005688 "U6 snRNP" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005737 EMBL:BA000025 EMBL:CH471081
GO:GO:0016607 GO:GO:0005681 TCDB:3.A.18.1.1 EMBL:AL662847
EMBL:AL662801 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CleanEx:HS_BAT1 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX CTD:7919 KO:K12812
GO:GO:0000346 GO:GO:0030621 GO:GO:0046784 EMBL:Z37166 EMBL:BT009909
EMBL:AK222912 EMBL:AB088115 EMBL:AB103621 EMBL:AB202112
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 EMBL:BC000361 EMBL:BC013006 EMBL:AF029061
EMBL:AF029062 IPI:IPI00641829 IPI:IPI00848161 PIR:I37201
RefSeq:NP_004631.1 RefSeq:NP_542165.1 UniGene:Hs.254042
UniGene:Hs.730849 PDB:1T5I PDB:1T6N PDB:1XTI PDB:1XTJ PDB:1XTK
PDBsum:1T5I PDBsum:1T6N PDBsum:1XTI PDBsum:1XTJ PDBsum:1XTK
ProteinModelPortal:Q13838 SMR:Q13838 IntAct:Q13838
MINT:MINT-1032422 STRING:Q13838 PhosphoSite:Q13838 DMDM:2500529
PaxDb:Q13838 PRIDE:Q13838 DNASU:7919 Ensembl:ENST00000383508
Ensembl:ENST00000396172 Ensembl:ENST00000400295
Ensembl:ENST00000400296 Ensembl:ENST00000412106
Ensembl:ENST00000412330 Ensembl:ENST00000413678
Ensembl:ENST00000414440 Ensembl:ENST00000415689
Ensembl:ENST00000416863 Ensembl:ENST00000430784
Ensembl:ENST00000431360 Ensembl:ENST00000441425
Ensembl:ENST00000445218 Ensembl:ENST00000448296
Ensembl:ENST00000453138 Ensembl:ENST00000456476
Ensembl:ENST00000456666 Ensembl:ENST00000458640 GeneID:7919
KEGG:hsa:7919 UCSC:uc003ntt.3 GeneCards:GC06M031500 HGNC:HGNC:13917
HPA:CAB034012 MIM:142560 neXtProt:NX_Q13838 PharmGKB:PA25262
InParanoid:Q13838 PhylomeDB:Q13838 ChiTaRS:DDX39B
EvolutionaryTrace:Q13838 GenomeRNAi:7919 NextBio:30405
ArrayExpress:Q13838 Bgee:Q13838 Genevestigator:Q13838
GermOnline:ENSG00000198563 GO:GO:0043008 Uniprot:Q13838
Length = 428
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 129/330 (39%), Positives = 197/330 (59%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F D+ LK ELL I + GFE PS +Q E IP A+ G D+L +AK+G GKTA F + L++
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDD--IMRLYQP 238
++ + V+++ TRELA Q S+ + K++ N++V V GG S+K D +++ P
Sbjct: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQIL 297
H++VGTPGRIL L++ LK ++DE DK+L + + V+++ R P +Q++
Sbjct: 167 -HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVM 225
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKL 355
MFSAT ++ K++Q P I + DE LTL G+ QYY +++ +K L L L
Sbjct: 226 MFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVL 285
Query: 356 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 415
+ NQ +IF SV R LA+ + E + IH M Q+ R + F++ R LV T+
Sbjct: 286 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATN 345
Query: 416 LFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
LF RG+DI+ VN+ N+D P++S+TYLHRV
Sbjct: 346 LFGRGMDIERVNIAFNYDMPEDSDTYLHRV 375
>UNIPROTKB|Q29024 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784 "intronless viral
mRNA export from host nucleus" evidence=IEA] [GO:0043008
"ATP-dependent protein binding" evidence=IEA] [GO:0030621 "U4 snRNA
binding" evidence=IEA] [GO:0017070 "U6 snRNA binding" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0005688 "U6 snRNP" evidence=IEA] [GO:0005687 "U4 snRNP"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000346 "transcription export complex" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0016607
GO:GO:0005681 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000245 GO:GO:0004004 EMBL:AJ251914 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:Z34846 PIR:I47126
RefSeq:NP_001005157.1 UniGene:Ssc.11719 ProteinModelPortal:Q29024
SMR:Q29024 STRING:Q29024 PRIDE:Q29024 Ensembl:ENSSSCT00000001529
GeneID:448813 KEGG:ssc:448813 ArrayExpress:Q29024 Uniprot:Q29024
Length = 428
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 129/330 (39%), Positives = 197/330 (59%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F D+ LK ELL I + GFE PS +Q E IP A+ G D+L +AK+G GKTA F + L++
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDD--IMRLYQP 238
++ + V+++ TRELA Q S+ + K++ N++V V GG S+K D +++ P
Sbjct: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQIL 297
H++VGTPGRIL L++ LK ++DE DK+L + + V+++ R P +Q++
Sbjct: 167 -HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVM 225
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKL 355
MFSAT ++ K++Q P I + DE LTL G+ QYY +++ +K L L L
Sbjct: 226 MFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVL 285
Query: 356 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 415
+ NQ +IF SV R LA+ + E + IH M Q+ R + F++ R LV T+
Sbjct: 286 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATN 345
Query: 416 LFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
LF RG+DI+ VN+ N+D P++S+TYLHRV
Sbjct: 346 LFGRGMDIERVNIAFNYDMPEDSDTYLHRV 375
>MGI|MGI:99240 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=ISO] [GO:0000346 "transcription export complex"
evidence=ISO] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=ISO] [GO:0030621 "U4 snRNA binding" evidence=ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:99240 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:AF118128 EMBL:AY255786 EMBL:AY255787
EMBL:AC007080 EMBL:AK088867 EMBL:AK051034 EMBL:BC011067
EMBL:BC024859 IPI:IPI00409462 RefSeq:NP_001239386.1
RefSeq:NP_062667.1 UniGene:Mm.439827 ProteinModelPortal:Q9Z1N5
SMR:Q9Z1N5 IntAct:Q9Z1N5 STRING:Q9Z1N5 PhosphoSite:Q9Z1N5
PaxDb:Q9Z1N5 PRIDE:Q9Z1N5 Ensembl:ENSMUST00000068056
Ensembl:ENSMUST00000172549 Ensembl:ENSMUST00000173731 GeneID:53817
KEGG:mmu:53817 InParanoid:Q9Z1N5 NextBio:310679 Bgee:Q9Z1N5
CleanEx:MM_BAT1A Genevestigator:Q9Z1N5 Uniprot:Q9Z1N5
Length = 428
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 129/330 (39%), Positives = 197/330 (59%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F D+ LK ELL I + GFE PS +Q E IP A+ G D+L +AK+G GKTA F + L++
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDD--IMRLYQP 238
++ + V+++ TRELA Q S+ + K++ N++V V GG S+K D +++ P
Sbjct: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQIL 297
H++VGTPGRIL L++ LK ++DE DK+L + + V+++ R P +Q++
Sbjct: 167 -HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVM 225
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKL 355
MFSAT ++ K++Q P I + DE LTL G+ QYY +++ +K L L L
Sbjct: 226 MFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVL 285
Query: 356 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 415
+ NQ +IF SV R LA+ + E + IH M Q+ R + F++ R LV T+
Sbjct: 286 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATN 345
Query: 416 LFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
LF RG+DI+ VN+ N+D P++S+TYLHRV
Sbjct: 346 LFGRGMDIERVNIAFNYDMPEDSDTYLHRV 375
>RGD|70923 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10116 "Rattus norvegicus" [GO:0000245 "spliceosomal complex
assembly" evidence=IEA;ISO] [GO:0000346 "transcription export
complex" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=IEA;ISO] [GO:0005687 "U4 snRNP" evidence=IEA;ISO]
[GO:0005688 "U6 snRNP" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=IEA;ISO] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=IEA;ISO] [GO:0030621 "U4 snRNA binding" evidence=IEA;ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA;ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=IEA;ISO] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:70923 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:M75168 EMBL:AF387339 EMBL:AJ314857 EMBL:BC080243
IPI:IPI00215291 PIR:A42811 RefSeq:NP_579834.2 UniGene:Rn.202950
ProteinModelPortal:Q63413 SMR:Q63413 STRING:Q63413
World-2DPAGE:0004:Q63413 PRIDE:Q63413 Ensembl:ENSRNOT00000001115
GeneID:114612 KEGG:rno:114612 UCSC:RGD:70923 InParanoid:Q63413
NextBio:618775 ArrayExpress:Q63413 Genevestigator:Q63413
GermOnline:ENSRNOG00000000841 Uniprot:Q63413
Length = 428
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 129/330 (39%), Positives = 197/330 (59%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F D+ LK ELL I + GFE PS +Q E IP A+ G D+L +AK+G GKTA F + L++
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDD--IMRLYQP 238
++ + V+++ TRELA Q S+ + K++ N++V V GG S+K D +++ P
Sbjct: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQIL 297
H++VGTPGRIL L++ LK ++DE DK+L + + V+++ R P +Q++
Sbjct: 167 -HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVM 225
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKL 355
MFSAT ++ K++Q P I + DE LTL G+ QYY +++ +K L L L
Sbjct: 226 MFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVL 285
Query: 356 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 415
+ NQ +IF SV R LA+ + E + IH M Q+ R + F++ R LV T+
Sbjct: 286 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATN 345
Query: 416 LFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
LF RG+DI+ VN+ N+D P++S+TYLHRV
Sbjct: 346 LFGRGMDIERVNIAFNYDMPEDSDTYLHRV 375
>ZFIN|ZDB-GENE-040426-2902 [details] [associations]
symbol:ddx39ab "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Ab" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-2902 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
HOVERGEN:HBG107334 KO:K13182 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 OMA:WANCVIS CTD:7919 EMBL:FP101915
EMBL:BC044169 EMBL:BC067555 EMBL:BC128804 EMBL:BX248081
IPI:IPI00631848 RefSeq:NP_998142.1 UniGene:Dr.75872 SMR:Q803W0
STRING:Q803W0 Ensembl:ENSDART00000019957 GeneID:406249
KEGG:dre:406249 InParanoid:Q803W0 NextBio:20817884 Uniprot:Q803W0
Length = 427
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 130/330 (39%), Positives = 197/330 (59%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F D+ LK ELL I + GFE PS +Q E IP A+ G DIL +AK+G GKTA F + L++
Sbjct: 46 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQ 105
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLK--DDIMRLYQP 238
I+ + + V+++ TRELA Q S+ + K++ ++V V GG S+K +D+++ P
Sbjct: 106 IEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMSIKKDEDVLKKSCP 165
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQIL 297
H++VGTPGRIL L + LK+ V+DE DK+L + + V+ + R P +Q +
Sbjct: 166 -HIVVGTPGRILALVRNKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCM 224
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKL 355
MFSAT ++ K++Q P + + DE LTL G+ QYY +++ +K L L L
Sbjct: 225 MFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYCKLKDNEKNRKLFDLLDVL 284
Query: 356 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 415
+ NQ +IF SV R L++ + E + IH M Q+ R + F++ R LV T+
Sbjct: 285 EFNQVVIFVKSVQRCVALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATN 344
Query: 416 LFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
LF RG+DI+ VN+V N+D P++S+TYLHRV
Sbjct: 345 LFGRGMDIERVNIVFNYDMPEDSDTYLHRV 374
>UNIPROTKB|Q5STU3 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AL662847 EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107334 EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 UniGene:Hs.254042
UniGene:Hs.730849 HGNC:HGNC:13917 EMBL:CR942185 IPI:IPI00790636
SMR:Q5STU3 STRING:Q5STU3 Ensembl:ENST00000376177
Ensembl:ENST00000400293 Ensembl:ENST00000430703
Ensembl:ENST00000438578 Ensembl:ENST00000446341
Ensembl:ENST00000450987 Ensembl:ENST00000453488 Uniprot:Q5STU3
Length = 425
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 129/332 (38%), Positives = 198/332 (59%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F D+ LK ELL I + GFE PS +Q E IP A+ G D+L +AK+G GKTA F + L++
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDD--IMRLYQP 238
++ + V+++ TRELA Q S+ + K++ N++V V GG S+K D +++ P
Sbjct: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQIL 297
H++VGTPGRIL L++ LK ++DE DK+L + + V+++ R P +Q++
Sbjct: 167 -HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVM 225
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKL 355
MFSAT ++ K++Q P I + DE LTL G+ QYY +++ +K L L L
Sbjct: 226 MFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVL 285
Query: 356 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 415
+ NQ +IF SV R LA+ + E + IH M Q+ R + F++ R LV T+
Sbjct: 286 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATN 345
Query: 416 LFTRGIDIQAVNVVINFDFPKNSETYLHRVCW 447
LF RG+DI+ VN+ N+D P++S+TYLHR C+
Sbjct: 346 LFGRGMDIERVNIAFNYDMPEDSDTYLHR-CY 376
>TAIR|locus:2147987 [details] [associations]
symbol:UAP56a "homolog of human UAP56 a" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0009506
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL360314 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ010466 EMBL:AY052303
EMBL:BT001052 EMBL:AK221273 EMBL:AK221708 EMBL:AK226428
IPI:IPI00760330 IPI:IPI00760336 IPI:IPI00760344 PIR:T51343
RefSeq:NP_568244.2 RefSeq:NP_568245.1 UniGene:At.49007
UniGene:At.73904 ProteinModelPortal:Q56XG6 SMR:Q56XG6 IntAct:Q56XG6
STRING:Q56XG6 PRIDE:Q56XG6 EnsemblPlants:AT5G11170.1
EnsemblPlants:AT5G11200.1 GeneID:830986 GeneID:830990
KEGG:ath:AT5G11170 KEGG:ath:AT5G11200 GeneFarm:932 TAIR:At5g11170
InParanoid:Q56XG6 PhylomeDB:Q56XG6 ProtClustDB:CLSN2689601
Genevestigator:Q56XG6 Uniprot:Q56XG6
Length = 427
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 133/355 (37%), Positives = 203/355 (57%)
Query: 101 KIPPADTRYRTEDV----TATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALT 156
K+P + + E V + F D+ LK ELL I + GFE PS +Q E IP A+
Sbjct: 23 KVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
Query: 157 GSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL- 215
G D++ +AK+G GKTA F + L++I+ + ++L TRELA Q +L
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLP 142
Query: 216 NIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADK 273
+ +V V GG ++K D+++ P H++VGTPGR+L L+++ LK+ ++DE DK
Sbjct: 143 DTKVSVFYGGVNIKIHKDLLKNECP-HIVVGTPGRVLALAREKDLSLKNVRHFILDECDK 201
Query: 274 LL-SPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLK 330
+L S + + V+++ + P ++Q++MFSAT ++ K++Q P I + DE LTL
Sbjct: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
Query: 331 GITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 390
G+ Q+Y + E +K LN L L NQ +IF SV+R L K + E + IH+
Sbjct: 262 GLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
Query: 391 MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +++TYLHRV
Sbjct: 322 MSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRV 376
>ZFIN|ZDB-GENE-030131-4275 [details] [associations]
symbol:ddx39aa "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Aa" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-4275 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 EMBL:BC071505
IPI:IPI00510085 UniGene:Dr.1111 ProteinModelPortal:Q6IQA5
SMR:Q6IQA5 STRING:Q6IQA5 PRIDE:Q6IQA5 InParanoid:Q6IQA5
ArrayExpress:Q6IQA5 Bgee:Q6IQA5 Uniprot:Q6IQA5
Length = 427
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 129/330 (39%), Positives = 197/330 (59%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F D+ LK ELL I + GFE PS +Q E IP A+ G DIL +AK+G GKTA F + L++
Sbjct: 46 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQ 105
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLN-IQVMVTTGGTSLK--DDIMRLYQP 238
I+ + + V+++ TRELA Q S+ + K+++ ++ GG S+K +D+++ P
Sbjct: 106 IEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMSSVKCAAFFGGMSIKKDEDVLKKNCP 165
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQIL 297
H++VGTPGRIL LS+ LK+ V+DE DK+L + + V+ + R P +Q +
Sbjct: 166 -HIVVGTPGRILALSRNKTLTLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCM 224
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKL 355
MFSAT ++ K++Q P + + DE LTL G+ QYY +++ +K L L L
Sbjct: 225 MFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVL 284
Query: 356 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 415
+ NQ +IF SV R L++ + E + IH M Q+ R + F++ R LV T+
Sbjct: 285 EFNQVVIFVKSVPRCVALSQLLVEQNFPAIAIHRGMTQEERLSRYQQFKDFQRRILVATN 344
Query: 416 LFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
LF RG+DI+ VN+V N+D P++S+TYLHRV
Sbjct: 345 LFGRGMDIERVNIVFNYDMPEDSDTYLHRV 374
>UNIPROTKB|Q3T147 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9913 "Bos taurus" [GO:0006406 "mRNA export from nucleus"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046784 "intronless viral mRNA export
from host nucleus" evidence=IEA] [GO:0043008 "ATP-dependent protein
binding" evidence=IEA] [GO:0030621 "U4 snRNA binding" evidence=IEA]
[GO:0017070 "U6 snRNA binding" evidence=IEA] [GO:0010501 "RNA
secondary structure unwinding" evidence=IEA] [GO:0005688 "U6 snRNP"
evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 GO:GO:0006406 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000245
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0010501 GO:GO:0017070 HSSP:Q5STU4 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 EMBL:BC102131
IPI:IPI00690141 RefSeq:NP_001028801.1 UniGene:Bt.4945
ProteinModelPortal:Q3T147 SMR:Q3T147 STRING:Q3T147 PRIDE:Q3T147
Ensembl:ENSBTAT00000029090 GeneID:540191 KEGG:bta:540191 CTD:7919
InParanoid:Q3T147 KO:K12812 OMA:NAENPAI NextBio:20878478
ArrayExpress:Q3T147 GO:GO:0000346 GO:GO:0005687 GO:GO:0005688
GO:GO:0030621 GO:GO:0046784 Uniprot:Q3T147
Length = 428
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 128/330 (38%), Positives = 197/330 (59%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F D+ LK ELL I + GFE PS +Q E IP A+ G D+L +AK+G GKTA F + L++
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDD--IMRLYQP 238
++ + V+++ TRELA Q S+ + K++ +++V V GG S+K D +++ P
Sbjct: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKNCP 166
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQIL 297
H++VGTPGRIL L++ LK ++DE DK+L + + V+++ R P +Q++
Sbjct: 167 -HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVM 225
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKL 355
MFSAT ++ K++Q P I + DE LTL G+ QYY +++ +K L L L
Sbjct: 226 MFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVL 285
Query: 356 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 415
+ NQ +IF SV R LA+ + E + IH M Q+ R + F++ R LV T+
Sbjct: 286 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATN 345
Query: 416 LFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
LF RG+DI+ VN+ N+D P++S+TYLHRV
Sbjct: 346 LFGRGMDIERVNIAFNYDMPEDSDTYLHRV 375
>UNIPROTKB|F1RZ83 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 OMA:EDWKFDT
EMBL:CU655945 Ensembl:ENSSSCT00000018679 ArrayExpress:F1RZ83
Uniprot:F1RZ83
Length = 411
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 120/335 (35%), Positives = 198/335 (59%)
Query: 113 DVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTA 172
DVT T F+ L+ +LL GI+ G P Q+ I + + ++ + +++GTGKTA
Sbjct: 35 DVTPT----FDTMGLREDLLRGIYAYGRPEPGAFQQRKILVVMKSNNAVVISQSGTGKTA 90
Query: 173 AFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDI 232
F I L+ +D Q +IL PTRELA+Q + LG ++N+Q GGT++ +DI
Sbjct: 91 TFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDI 150
Query: 233 MRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPA 292
+L H++ GTPGR+ D+ ++ + MLV+DEAD++L+ F+ + + R+LP
Sbjct: 151 RKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 210
Query: 293 NRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNT 350
Q+++ SAT P + + +K++ P ++ DELTL+GI Q++ VE E K L
Sbjct: 211 ATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCD 270
Query: 351 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRN 410
L+ L I Q++IFCN+ +V+ L +K+ E ++ +H M Q R + +FR+GA R
Sbjct: 271 LYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRV 330
Query: 411 LVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
L+ TD++ RG+D+ V+++IN+D P N E Y+HR+
Sbjct: 331 LISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI 365
>FB|FBgn0014189 [details] [associations]
symbol:Hel25E "Helicase at 25E" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IC;NAS;IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0005700
"polytene chromosome" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS;NAS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005875 GO:GO:0007052
EMBL:AE014134 GO:GO:0016607 GO:GO:0005681 GO:GO:0003723
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095549
KO:K12812 EMBL:X79802 EMBL:L06018 EMBL:AY118921 PIR:S51601
RefSeq:NP_723089.1 RefSeq:NP_723090.1 RefSeq:NP_723091.1
UniGene:Dm.3332 ProteinModelPortal:Q27268 SMR:Q27268 DIP:DIP-20199N
IntAct:Q27268 MINT:MINT-304772 STRING:Q27268 PaxDb:Q27268
PRIDE:Q27268 EnsemblMetazoa:FBtr0079123 EnsemblMetazoa:FBtr0079124
EnsemblMetazoa:FBtr0079125 GeneID:33781 KEGG:dme:Dmel_CG7269
CTD:33781 FlyBase:FBgn0014189 InParanoid:Q27268 OMA:ENRFLEE
OrthoDB:EOG47WM45 PhylomeDB:Q27268 GenomeRNAi:33781 NextBio:785218
Bgee:Q27268 GermOnline:CG7269 Uniprot:Q27268
Length = 424
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 130/330 (39%), Positives = 196/330 (59%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F D+ LK E+L I + GFE PS +Q E IP A+ G DIL +AK+G GKTA F + L++
Sbjct: 43 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 102
Query: 182 ID-QDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDDIMRLYQPV 239
++ DNN V+++ TRELA Q S+ + K++ ++V V GG +++ D L
Sbjct: 103 LEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGT 162
Query: 240 -HLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQIL 297
H++VGTPGRIL L + LK V+DE DK+L + + V+++ R P +Q++
Sbjct: 163 PHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVM 222
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKL 355
MFSAT ++ K++Q P + + DE LTL G+ Q+Y ++E +K L L L
Sbjct: 223 MFSATLSKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVL 282
Query: 356 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 415
+ NQ +IF SV R L++ +TE + IH M Q+ R + F++ R LV T+
Sbjct: 283 EFNQVVIFVKSVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATN 342
Query: 416 LFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
LF RG+DI+ VN+V N+D P++S+TYLHRV
Sbjct: 343 LFGRGMDIERVNIVFNYDMPEDSDTYLHRV 372
>UNIPROTKB|Q5ZHZ0 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334
EMBL:AJ720994 IPI:IPI00585240 ProteinModelPortal:Q5ZHZ0 SMR:Q5ZHZ0
Uniprot:Q5ZHZ0
Length = 428
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 136/380 (35%), Positives = 214/380 (56%)
Query: 72 DSSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKREL 131
D+ ++D E V++ A D S P D + + + F D+ LK EL
Sbjct: 7 DNELLDYEEDEVENAAGGDGSEAP-------PKKDVK---GSYVSIHSSGFRDFLLKPEL 56
Query: 132 LMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQV 191
L I + GFE PS +Q E IP A+ G D+L +AK+G GKTA F + L++++ + V
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 192 VILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDD--IMRLYQPVHLLVGTPGR 248
+++ TRELA Q S+ + K++ +++V V GG ++K D +++ P H++VGTPGR
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLAVKKDEEVLKKNCP-HIVVGTPGR 175
Query: 249 ILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQILMFSATFPVTV 307
IL L++ LK ++DE DK+L + + V+++ R P +Q++MFSAT +
Sbjct: 176 ILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEI 235
Query: 308 KDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCN 365
+ K++Q P I + DE LTL G+ QYY +++ +K L L L+ NQ +IF
Sbjct: 236 RPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVK 295
Query: 366 SVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQA 425
SV R LA+ + E + IH M Q+ R + F++ R LV T+LF RG+DI+
Sbjct: 296 SVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIER 355
Query: 426 VNVVINFDFPKNSETYLHRV 445
VN+ N+D P++S+TYLHRV
Sbjct: 356 VNIAFNYDMPEDSDTYLHRV 375
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 118/325 (36%), Positives = 195/325 (60%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F++ L +E++ I GFE +PIQ ++IP++L D++ +A+ GTGKTAAF IP +EK
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEK 63
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
++ N+ +Q +++ PTRELA+Q S+ ++G ++V+ GG ++ I L + H+
Sbjct: 64 VNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPHV 123
Query: 242 LVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSA 301
+VGTPGRI+D +G L+ +V+DEAD++L+ F +E ++ +PA RQ L+FSA
Sbjct: 124 IVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLFSA 183
Query: 302 TFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQS 360
T P ++ ++++ +P ++ + E+T+ I QYY V E++K L L +
Sbjct: 184 TMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKKKFDILTRLLDIQAPELA 243
Query: 361 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 420
I+F + RV+ LA+ + GY+ IH + Q R V F+ GA LV TD+ RG
Sbjct: 244 IVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAARG 303
Query: 421 IDIQAVNVVINFDFPKNSETYLHRV 445
+DI V V NFD P++ E+Y+HR+
Sbjct: 304 LDISGVTHVYNFDIPQDPESYVHRI 328
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 117/325 (36%), Positives = 188/325 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F + L LL + GFE +PIQ E+IP AL G DI+ +A+ GTGKTAAF +P L+K
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
+D +Q +++ PTRELA+Q + ++GKH ++++ GG + I L + H+
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHI 123
Query: 242 LVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSA 301
+VGTPGRILD + L++ +V+DEAD++L+ F +E ++ +P Q L+FSA
Sbjct: 124 IVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSA 183
Query: 302 TFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQS 360
T P ++ ++++ +P I + E+T+ I Q+Y V+E++K L L +
Sbjct: 184 TMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELA 243
Query: 361 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 420
I+F + RV+ L++ + GY+ IH + Q R V F+ G+ LV TD+ RG
Sbjct: 244 IVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARG 303
Query: 421 IDIQAVNVVINFDFPKNSETYLHRV 445
+DI V V NFD P++ E+Y+HR+
Sbjct: 304 LDISGVTHVYNFDIPQDPESYVHRI 328
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 117/325 (36%), Positives = 188/325 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F + L LL + GFE +PIQ E+IP AL G DI+ +A+ GTGKTAAF +P L+K
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
+D +Q +++ PTRELA+Q + ++GKH ++++ GG + I L + H+
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHI 123
Query: 242 LVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSA 301
+VGTPGRILD + L++ +V+DEAD++L+ F +E ++ +P Q L+FSA
Sbjct: 124 IVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSA 183
Query: 302 TFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQS 360
T P ++ ++++ +P I + E+T+ I Q+Y V+E++K L L +
Sbjct: 184 TMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELA 243
Query: 361 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 420
I+F + RV+ L++ + GY+ IH + Q R V F+ G+ LV TD+ RG
Sbjct: 244 IVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARG 303
Query: 421 IDIQAVNVVINFDFPKNSETYLHRV 445
+DI V V NFD P++ E+Y+HR+
Sbjct: 304 LDISGVTHVYNFDIPQDPESYVHRI 328
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 117/325 (36%), Positives = 188/325 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F + L LL + GFE +PIQ E+IP AL G DI+ +A+ GTGKTAAF +P L+K
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
+D +Q +++ PTRELA+Q + ++GKH ++++ GG + I L + H+
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHI 123
Query: 242 LVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSA 301
+VGTPGRILD + L++ +V+DEAD++L+ F +E ++ +P Q L+FSA
Sbjct: 124 IVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSA 183
Query: 302 TFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQS 360
T P ++ ++++ +P I + E+T+ I Q+Y V+E++K L L +
Sbjct: 184 TMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELA 243
Query: 361 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 420
I+F + RV+ L++ + GY+ IH + Q R V F+ G+ LV TD+ RG
Sbjct: 244 IVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARG 303
Query: 421 IDIQAVNVVINFDFPKNSETYLHRV 445
+DI V V NFD P++ E+Y+HR+
Sbjct: 304 LDISGVTHVYNFDIPQDPESYVHRI 328
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 117/325 (36%), Positives = 188/325 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F + L LL + GFE +PIQ E+IP AL G DI+ +A+ GTGKTAAF +P L+K
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
+D +Q +++ PTRELA+Q + ++GKH ++++ GG + I L + H+
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHI 123
Query: 242 LVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSA 301
+VGTPGRILD + L++ +V+DEAD++L+ F +E ++ +P Q L+FSA
Sbjct: 124 IVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSA 183
Query: 302 TFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQS 360
T P ++ ++++ +P I + E+T+ I Q+Y V+E++K L L +
Sbjct: 184 TMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELA 243
Query: 361 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 420
I+F + RV+ L++ + GY+ IH + Q R V F+ G+ LV TD+ RG
Sbjct: 244 IVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARG 303
Query: 421 IDIQAVNVVINFDFPKNSETYLHRV 445
+DI V V NFD P++ E+Y+HR+
Sbjct: 304 LDISGVTHVYNFDIPQDPESYVHRI 328
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 117/325 (36%), Positives = 188/325 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F + L LL + GFE +PIQ E+IP AL G DI+ +A+ GTGKTAAF +P L+K
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
+D +Q +++ PTRELA+Q + ++GKH ++++ GG + I L + H+
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHI 123
Query: 242 LVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSA 301
+VGTPGRILD + L++ +V+DEAD++L+ F +E ++ +P Q L+FSA
Sbjct: 124 IVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSA 183
Query: 302 TFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQS 360
T P ++ ++++ +P I + E+T+ I Q+Y V+E++K L L +
Sbjct: 184 TMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELA 243
Query: 361 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 420
I+F + RV+ L++ + GY+ IH + Q R V F+ G+ LV TD+ RG
Sbjct: 244 IVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARG 303
Query: 421 IDIQAVNVVINFDFPKNSETYLHRV 445
+DI V V NFD P++ E+Y+HR+
Sbjct: 304 LDISGVTHVYNFDIPQDPESYVHRI 328
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 117/325 (36%), Positives = 188/325 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F + L LL + GFE +PIQ E+IP AL G DI+ +A+ GTGKTAAF +P L+K
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
+D +Q +++ PTRELA+Q + ++GKH ++++ GG + I L + H+
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHI 123
Query: 242 LVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSA 301
+VGTPGRILD + L++ +V+DEAD++L+ F +E ++ +P Q L+FSA
Sbjct: 124 IVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSA 183
Query: 302 TFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQS 360
T P ++ ++++ +P I + E+T+ I Q+Y V+E++K L L +
Sbjct: 184 TMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELA 243
Query: 361 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 420
I+F + RV+ L++ + GY+ IH + Q R V F+ G+ LV TD+ RG
Sbjct: 244 IVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARG 303
Query: 421 IDIQAVNVVINFDFPKNSETYLHRV 445
+DI V V NFD P++ E+Y+HR+
Sbjct: 304 LDISGVTHVYNFDIPQDPESYVHRI 328
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 117/325 (36%), Positives = 188/325 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F + L LL + GFE +PIQ E+IP AL G DI+ +A+ GTGKTAAF +P L+K
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
+D +Q +++ PTRELA+Q + ++GKH ++++ GG + I L + H+
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHI 123
Query: 242 LVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSA 301
+VGTPGRILD + L++ +V+DEAD++L+ F +E ++ +P Q L+FSA
Sbjct: 124 IVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSA 183
Query: 302 TFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQS 360
T P ++ ++++ +P I + E+T+ I Q+Y V+E++K L L +
Sbjct: 184 TMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELA 243
Query: 361 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 420
I+F + RV+ L++ + GY+ IH + Q R V F+ G+ LV TD+ RG
Sbjct: 244 IVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARG 303
Query: 421 IDIQAVNVVINFDFPKNSETYLHRV 445
+DI V V NFD P++ E+Y+HR+
Sbjct: 304 LDISGVTHVYNFDIPQDPESYVHRI 328
>ZFIN|ZDB-GENE-030131-202 [details] [associations]
symbol:ddx20 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 20" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-202
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:BX664742 IPI:IPI00890438
Ensembl:ENSDART00000087037 Ensembl:ENSDART00000134226
Uniprot:F1R1C1
Length = 789
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 129/353 (36%), Positives = 196/353 (55%)
Query: 107 TRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKN 166
+R RT+DV + G EF L + +L G+ GF+RPSPIQ ++IP+ G D++ +AK+
Sbjct: 41 SRTRTDDVLISGGVEFSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLDLIVQAKS 100
Query: 167 GTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLN-IQVMVTTGG 225
GTGKT F AL+ + +N QV++L PTRE+A+Q V +G + ++ V GG
Sbjct: 101 GTGKTCVFTTIALDSLILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGG 160
Query: 226 TSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLL----SPEFQP 281
+ D L + H+ +G+PGRI L + G ++ + V+DEADKLL S FQ
Sbjct: 161 RPISQDKQHL-KKCHIAIGSPGRIKQLIEMGALMVSSIRLFVLDEADKLLEDDSSSSFQE 219
Query: 282 SVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMD-ELTLKGITQYYAFVE 340
+ + LPAN+Q+L SAT+P ++ +Y+++P + L + L G+ QYY V
Sbjct: 220 QINWIYSSLPANKQMLALSATYPESLAQQLSRYMREPTFVRLNPTDPGLLGLKQYYKIVP 279
Query: 341 ER--------QKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKML 392
+KV L LFSK+ NQ+++F N R + LA ++ G I +
Sbjct: 280 SHSLPHKVFEEKVQSLLELFSKIPFNQALVFSNLHTRAQHLADILSSKGLPAVCISGGLS 339
Query: 393 QDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
QD R + CR L+ TDL +RGID + VN+VIN D P++ ETY+HR+
Sbjct: 340 QDQRLEAMWKLKQYQCRVLISTDLTSRGIDAEKVNLVINLDVPQDWETYMHRI 392
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 117/325 (36%), Positives = 192/325 (59%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F+D+ L +L+ I GFE +PIQ ++IP+ L+ D++ +A+ GTGKTAAF IP +EK
Sbjct: 5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEK 64
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
I+ ++ IQ +++ PTRELA+Q S+ ++G+ +V+ GG + I L + ++
Sbjct: 65 INPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPNI 124
Query: 242 LVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSA 301
+VGTPGR+LD + L + + +VMDEAD++L+ F +E ++ +P+ Q L+FSA
Sbjct: 125 IVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFSA 184
Query: 302 TFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQS 360
T P +K ++++ +P + + E+T+ I Q+Y V+ER+K L L +
Sbjct: 185 TMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKKFDTLTRLLDIQSPELA 244
Query: 361 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 420
I+F + RV+ LA+ + GY+ IH + Q R F+ GA LV TD+ RG
Sbjct: 245 IVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDVAARG 304
Query: 421 IDIQAVNVVINFDFPKNSETYLHRV 445
+DI V V NFD P++ E+Y+HR+
Sbjct: 305 LDISGVTHVYNFDVPQDPESYVHRI 329
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 117/325 (36%), Positives = 187/325 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F+D+ L +L I GFE +PIQ ++IP+ L D++ +A+ GTGKTAAF IP +EK
Sbjct: 5 FQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVEK 64
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
I+ ++ IQ +++ PTRELA+Q S+ ++G+ +V+ GG + I L + H+
Sbjct: 65 INPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRALKKNPHI 124
Query: 242 LVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSA 301
+VGTPGR+LD + L+ + +V+DEAD++L+ F +E ++ +PA Q L+FSA
Sbjct: 125 IVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAEHQTLLFSA 184
Query: 302 TFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQS 360
T P +K ++++ P + + E+T+ I Q+Y V ER+K L L +
Sbjct: 185 TMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLTRLLDIQSPELA 244
Query: 361 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 420
I+F + RV+ L + + GY+ IH + Q R F+ GA LV TD+ RG
Sbjct: 245 IVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDVAARG 304
Query: 421 IDIQAVNVVINFDFPKNSETYLHRV 445
+DI V V NFD P++ E+Y+HR+
Sbjct: 305 LDISGVTHVYNFDVPQDPESYVHRI 329
>POMBASE|SPAC17G6.14c [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase Uap56"
species:4896 "Schizosaccharomyces pombe" [GO:0000346 "transcription
export complex" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0008380
"RNA splicing" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC17G6.14c GO:GO:0005524 EMBL:CU329670
GO:GO:0008380 GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:D89270 PIR:T37846 PIR:T43199
RefSeq:NP_594261.1 ProteinModelPortal:O13792 SMR:O13792
STRING:O13792 EnsemblFungi:SPAC17G6.14c.1 GeneID:2542433
KEGG:spo:SPAC17G6.14c OMA:DAVEFNQ NextBio:20803490 Uniprot:O13792
Length = 434
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 131/366 (35%), Positives = 206/366 (56%)
Query: 94 QDWKARLKIPPADTRYRTEDVTATKGNE-------FEDYFLKRELLMGIFEKGFERPSPI 146
QD A+ P ADT E + KG+ F D+ LK ELL I + GFE PS +
Sbjct: 19 QDQPAQEITPAADTAENGEK-SDKKGSYVGIHSTGFRDFLLKPELLRAITDSGFEHPSEV 77
Query: 147 QEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQ 206
Q+ IP ++ G+D+L +AK+G GKTA F + L++I+ + + V++L TRELA Q
Sbjct: 78 QQVCIPQSILGTDVLCQAKSGMGKTAVFVLSTLQQIEPVDGEVSVLVLCHTRELAFQIKN 137
Query: 207 VCKELGKHL-NIQVMVTTGGTSLKDDIMRLY---QPVHLLVGTPGRILDLSKKGVCILKD 262
K+L +++ V GG ++K D+ + H++V TPGR+ L ++ + +
Sbjct: 138 EYARFSKYLPDVRTAVFYGGINIKQDMEAFKDKSKSPHIVVATPGRLNALVREKILKVNS 197
Query: 263 CSMLVMDEADKLL-SPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVI 321
V+DE DKLL S + + ++++ R P +Q++MFSAT ++ K++Q P I
Sbjct: 198 VKHFVLDECDKLLESVDMRRDIQEVFRATPPQKQVMMFSATLSNEIRPICKKFMQNPLEI 257
Query: 322 NLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITE 379
+ DE LTL G+ Q+Y +EE+ K +N L L+ NQ +IF SV+R L + + E
Sbjct: 258 YVDDETKLTLHGLQQHYVKLEEKAKNRKINDLLDSLEFNQVVIFVKSVSRANELDRLLRE 317
Query: 380 LGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSE 439
+ IH + Q+ R + + F++ R V TD+F RGIDI+ VN+VIN+D P + +
Sbjct: 318 CNFPSICIHGGLPQEERIKRYKAFKDFDKRICVATDVFGRGIDIERVNIVINYDMPDSPD 377
Query: 440 TYLHRV 445
+YLHRV
Sbjct: 378 SYLHRV 383
>TAIR|locus:2148027 [details] [associations]
symbol:UAP56b "homolog of human UAP56 b" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005618
"cell wall" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GO:GO:0005618 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
UniGene:At.49007 UniGene:At.73904 GeneID:830990 KEGG:ath:AT5G11200
OMA:LECVINY IPI:IPI00938969 RefSeq:NP_001154706.1
ProteinModelPortal:F4JWF6 SMR:F4JWF6 PRIDE:F4JWF6
EnsemblPlants:AT5G11200.2 Uniprot:F4JWF6
Length = 486
Score = 340 (124.7 bits), Expect = 7.8e-55, Sum P(2) = 7.8e-55
Identities = 76/224 (33%), Positives = 127/224 (56%)
Query: 101 KIPPADTRYRTEDV----TATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALT 156
K+P + + E V + F D+ LK ELL I + GFE PS +Q E IP A+
Sbjct: 23 KVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
Query: 157 GSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL- 215
G D++ +AK+G GKTA F + L++I+ + ++L TRELA Q +L
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLP 142
Query: 216 NIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADK 273
+ +V V GG ++K D+++ P H++VGTPGR+L L+++ LK+ ++DE DK
Sbjct: 143 DTKVSVFYGGVNIKIHKDLLKNECP-HIVVGTPGRVLALAREKDLSLKNVRHFILDECDK 201
Query: 274 LL-SPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQ 316
+L S + + V+++ + P ++Q++MFSAT ++ K++Q
Sbjct: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
Score = 260 (96.6 bits), Expect = 7.8e-55, Sum P(2) = 7.8e-55
Identities = 64/156 (41%), Positives = 88/156 (56%)
Query: 294 RQILMFSATFPVTVKDFKDKYLQK--PYVINLMDE--LTLKGITQYYAFVEERQKVHCLN 349
R ILMF + + F++K + P I + DE LTL G+ Q+Y + E +K LN
Sbjct: 284 RAILMFHSKTHI----FEEKRWTRISPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLN 339
Query: 350 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 409
L L NQ +IF SV+R L K + E + IH+ M Q+ R + F+ G R
Sbjct: 340 DLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKR 399
Query: 410 NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
LV TDL RGIDI+ VN+VIN+D P +++TYLHRV
Sbjct: 400 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRV 435
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 123/327 (37%), Positives = 194/327 (59%)
Query: 121 EFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 180
EF+ L LL + + GFE P+PIQ+E+IP+ L G +++ +A GTGKTAA+ +P L+
Sbjct: 3 EFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQ 62
Query: 181 KIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVH 240
+I + QV+I+ PTRELALQ + +LGK+L ++ + GG +++ I L Q V
Sbjct: 63 RIQRGKKA-QVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVE 121
Query: 241 LLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFS 300
++VGTPGRILD + + ++++DEAD++L F +E ++ L +Q L+FS
Sbjct: 122 VIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLFS 181
Query: 301 ATFPVTVKDFKDKYLQKPYVINLMD-ELTLKGITQYYAFVEERQKVHCL-NTLFSKLQIN 358
AT P +K K+L + L+ E T+ I Q Y + E +K+ L + L S+L I
Sbjct: 182 ATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETEKIEGLVSILNSELPI- 240
Query: 359 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 418
Q+I+FC + RV+ + +++ GY+ +H M Q R + F+ G LV TD+
Sbjct: 241 QAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAA 300
Query: 419 RGIDIQAVNVVINFDFPKNSETYLHRV 445
RG+DI V+ VINFD P+N E+Y+HR+
Sbjct: 301 RGLDIPDVSHVINFDIPQNPESYIHRI 327
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 123/327 (37%), Positives = 194/327 (59%)
Query: 121 EFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 180
EF+ L LL + + GFE P+PIQ+E+IP+ L G +++ +A GTGKTAA+ +P L+
Sbjct: 3 EFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQ 62
Query: 181 KIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVH 240
+I + QV+I+ PTRELALQ + +LGK+L ++ + GG +++ I L Q V
Sbjct: 63 RIQRGKKA-QVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVE 121
Query: 241 LLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFS 300
++VGTPGRILD + + ++++DEAD++L F +E ++ L +Q L+FS
Sbjct: 122 VIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLFS 181
Query: 301 ATFPVTVKDFKDKYLQKPYVINLMD-ELTLKGITQYYAFVEERQKVHCL-NTLFSKLQIN 358
AT P +K K+L + L+ E T+ I Q Y + E +K+ L + L S+L I
Sbjct: 182 ATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETEKIEGLVSILNSELPI- 240
Query: 359 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 418
Q+I+FC + RV+ + +++ GY+ +H M Q R + F+ G LV TD+
Sbjct: 241 QAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAA 300
Query: 419 RGIDIQAVNVVINFDFPKNSETYLHRV 445
RG+DI V+ VINFD P+N E+Y+HR+
Sbjct: 301 RGLDIPDVSHVINFDIPQNPESYIHRI 327
>UNIPROTKB|F1MRW7 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:DAAA02007520 IPI:IPI00867090
UniGene:Bt.13425 Ensembl:ENSBTAT00000024914 Uniprot:F1MRW7
Length = 825
Score = 566 (204.3 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 135/378 (35%), Positives = 206/378 (54%)
Query: 80 EKTVQSEAAVDPSSQDWKA-RLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEK 138
E+ +A +P+S+ + R + R RT DV + +FE L R +L G+
Sbjct: 21 ERVATHFSAPEPASRPVRTLRTAHDISGPRTRTGDVLLAEPADFESLLLSRPVLEGLRAV 80
Query: 139 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTR 198
GFERPSP+Q ++IP+ G D++ +AK+GTGKT F AL+ + +N Q++IL PTR
Sbjct: 81 GFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTR 140
Query: 199 ELALQTSQVCKELG-KHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGV 257
E+A+Q V +G K ++ V GGT L D RL + H+ VG+PGRI L +
Sbjct: 141 EIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRL-KKCHIAVGSPGRIKQLIELDY 199
Query: 258 CILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQ 316
+ ++DEADKLL FQ + + LPA++Q+L SAT+P + + KY++
Sbjct: 200 LNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMR 259
Query: 317 KPYVINL-MDELTLKGITQYYAFVEE--------RQKVHCLNTLFSKLQINQSIIFCNSV 367
+P + L + +L G+ QYY V +K L LFSK+ NQ+++F N
Sbjct: 260 EPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKTQHLQELFSKIPFNQALVFSNLH 319
Query: 368 NRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVN 427
+R + LA ++ G+ YI M Q+ R + CR L+ TDL +RGID + VN
Sbjct: 320 SRAQHLADILSSKGFPAEYISGNMDQNRRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVN 379
Query: 428 VVINFDFPKNSETYLHRV 445
+V+N D P + ETY+HR+
Sbjct: 380 LVVNLDVPLDCETYMHRI 397
>UNIPROTKB|F1MAM8 [details] [associations]
symbol:Ddx20 "Protein Ddx20" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:621744 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:11218
KO:K13131 GeneTree:ENSGT00530000062880 IPI:IPI00947925
RefSeq:NP_001178640.1 UniGene:Rn.137424 Ensembl:ENSRNOT00000068152
GeneID:84473 KEGG:rno:84473 NextBio:616964 ArrayExpress:F1MAM8
Uniprot:F1MAM8
Length = 824
Score = 565 (203.9 bits), Expect = 1.7e-54, P = 1.7e-54
Identities = 136/386 (35%), Positives = 206/386 (53%)
Query: 71 ADSSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRE 130
++S++ E+E A P+S W R R RT DV + +FE L R
Sbjct: 14 SESAMAAELEAAPVPAAEPTPASP-WNLRTAHDIGGPRTRTGDVVLAEPADFESLLLSRP 72
Query: 131 LLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQ 190
+L G+ GFERPSP+Q ++IP+ G D++ +AK+GTGKT F AL+ + +N Q
Sbjct: 73 VLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLILENYSTQ 132
Query: 191 VVILVPTRELALQTSQVCKELG-KHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI 249
++IL PTRE+A+Q V +G K ++ V GGT L D RL + H+ VG+PGRI
Sbjct: 133 ILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRL-KKCHIAVGSPGRI 191
Query: 250 LDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQILMFSATFPVTVK 308
L + + ++DEADKLL FQ + + LPA++Q+L SAT+P +
Sbjct: 192 KQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEILA 251
Query: 309 DFKDKYLQKPYVINLM-DELTLKGITQYYAFVEE--------RQKVHCLNTLFSKLQINQ 359
+ +Y++ P + L + +L G+ QYY V +K L LFSK+ NQ
Sbjct: 252 NALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHLQELFSKIPFNQ 311
Query: 360 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 419
+++F N +R + LA ++ G+ I M Q+ R + CR L+ TDL +R
Sbjct: 312 ALVFSNLHSRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSR 371
Query: 420 GIDIQAVNVVINFDFPKNSETYLHRV 445
GID + VN+V+N D P + ETY+HR+
Sbjct: 372 GIDAEKVNLVVNLDVPLDWETYMHRI 397
>UNIPROTKB|F1NRN3 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:AADN02044991 IPI:IPI00820769
ProteinModelPortal:F1NRN3 Ensembl:ENSGALT00000002285 Uniprot:F1NRN3
Length = 676
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 132/354 (37%), Positives = 196/354 (55%)
Query: 104 PADTRYRTEDVTATKG-NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILA 162
PA+ R+RT DV G ++F L +L G+ GF RPSP+Q ++IP+ G D++
Sbjct: 4 PAEGRFRTRDVLLPGGPSDFGSLLLSPPVLAGLEAAGFHRPSPVQLKAIPLGRCGLDLIV 63
Query: 163 RAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELG-KHLNIQVMV 221
+AK+GTGKT F AL+ + D+ QV+IL PTRE+A+Q V +G K ++ V
Sbjct: 64 QAKSGTGKTCVFSTIALDALLLDSPATQVLILAPTREIAVQIHAVITTIGIKMEGLECHV 123
Query: 222 TTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQ 280
GGT L D +RL + H+ VG+PGRI L + + ++DEADKLL FQ
Sbjct: 124 FIGGTPLSQDKVRL-KKCHIAVGSPGRIKQLIELDYLNTASIRLFILDEADKLLEEGSFQ 182
Query: 281 PSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMD-ELTLKGITQYYAFV 339
+ + LPAN+Q+L SAT+P ++ + Y+++P + L + +L G+ QYY V
Sbjct: 183 EQINWIYSSLPANKQMLAVSATYPESLANALTMYMREPTFVRLNPTDPSLIGLKQYYKIV 242
Query: 340 EER--------QKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKM 391
+K L LFSK+ NQ+++F N +R + LA+ +T G+ I M
Sbjct: 243 NSHPLPHKTFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISGSM 302
Query: 392 LQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
Q R + CR L+ TDL +RGID + VN+VIN D P + ETY+HR+
Sbjct: 303 NQSQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPVDWETYMHRI 356
>UNIPROTKB|F8VQ10 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AL662847 EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:NAENPAI EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 HGNC:HGNC:13917
ChiTaRS:DDX39B EMBL:CR942185 IPI:IPI01025218 SMR:F8VQ10
Ensembl:ENST00000417556 Ensembl:ENST00000547039
Ensembl:ENST00000547489 Ensembl:ENST00000548340
Ensembl:ENST00000548614 Ensembl:ENST00000550217
Ensembl:ENST00000552288 Uniprot:F8VQ10
Length = 443
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 129/345 (37%), Positives = 197/345 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F D+ LK ELL I + GFE PS +Q E IP A+ G D+L +AK+G GKTA F + L++
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
Query: 182 IDQDNN---------------VIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGG 225
++ + V+++ TRELA Q S+ + K++ N++V V GG
Sbjct: 107 LEPVTGQVYLGRVLGRGFWCVFVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGG 166
Query: 226 TSLKDD--IMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPS 282
S+K D +++ P H++VGTPGRIL L++ LK ++DE DK+L + +
Sbjct: 167 LSIKKDEEVLKKNCP-HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRD 225
Query: 283 VEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVE 340
V+++ R P +Q++MFSAT ++ K++Q P I + DE LTL G+ QYY ++
Sbjct: 226 VQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLK 285
Query: 341 ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVF 400
+ +K L L L+ NQ +IF SV R LA+ + E + IH M Q+ R +
Sbjct: 286 DNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRY 345
Query: 401 HDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
F++ R LV T+LF RG+DI+ VN+ N+D P++S+TYLHRV
Sbjct: 346 QQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRV 390
>MGI|MGI:1858415 [details] [associations]
symbol:Ddx20 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 20"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006917 "induction
of apoptosis" evidence=IPI] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IDA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1858415 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0008380
GO:GO:0003677 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:CH466608 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:11218 HOGENOM:HOG000112184 HOVERGEN:HBG051330
KO:K13131 OMA:VEDYEHY OrthoDB:EOG4SF95N EMBL:AJ250027 EMBL:AF220454
EMBL:BC125471 EMBL:BC137721 IPI:IPI00122400 RefSeq:NP_059093.3
UniGene:Mm.272826 ProteinModelPortal:Q9JJY4 SMR:Q9JJY4
IntAct:Q9JJY4 STRING:Q9JJY4 PhosphoSite:Q9JJY4 PaxDb:Q9JJY4
PRIDE:Q9JJY4 Ensembl:ENSMUST00000090680 GeneID:53975 KEGG:mmu:53975
GeneTree:ENSGT00530000062880 InParanoid:Q059Z6 NextBio:310865
Bgee:Q9JJY4 CleanEx:MM_DDX20 Genevestigator:Q9JJY4
GermOnline:ENSMUSG00000027905 Uniprot:Q9JJY4
Length = 825
Score = 562 (202.9 bits), Expect = 3.9e-54, P = 3.9e-54
Identities = 134/378 (35%), Positives = 202/378 (53%)
Query: 80 EKTVQSEAAVDPS-SQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEK 138
E+ AV+P+ + W R R RT DV + +FE L R +L G+
Sbjct: 22 ERAAAPVQAVEPTPASPWTQRTAHDIGGPRTRTGDVVLAEPADFESLLLSRPVLEGLRAA 81
Query: 139 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTR 198
GFERPSP+Q ++IP+ G D++ +AK+GTGKT F AL+ + +N Q++IL PTR
Sbjct: 82 GFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTR 141
Query: 199 ELALQTSQVCKELG-KHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGV 257
E+A+Q V +G K ++ V GGT L D RL + H+ VG+PGRI L +
Sbjct: 142 EIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRL-KKCHIAVGSPGRIKQLIELDY 200
Query: 258 CILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQ 316
+ ++DEADKLL FQ + + LPA++Q+L SAT+P + + +Y++
Sbjct: 201 LNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEVLANALTRYMR 260
Query: 317 KPYVINLM-DELTLKGITQYYAFVEE--------RQKVHCLNTLFSKLQINQSIIFCNSV 367
P + L + +L G+ QYY V +K L LFSK+ NQ+++F N
Sbjct: 261 DPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHLQELFSKVPFNQALVFSNLH 320
Query: 368 NRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVN 427
+R + LA ++ G+ I M Q+ R + CR L+ TDL +RGID + VN
Sbjct: 321 SRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVN 380
Query: 428 VVINFDFPKNSETYLHRV 445
+V+N D P + ETY+HR+
Sbjct: 381 LVVNLDVPLDWETYMHRI 398
>UNIPROTKB|E9PSX0 [details] [associations]
symbol:Ddx20 "Protein Ddx20" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:621744 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00554119
Ensembl:ENSRNOT00000020984 ArrayExpress:E9PSX0 Uniprot:E9PSX0
Length = 826
Score = 562 (202.9 bits), Expect = 4.0e-54, P = 4.0e-54
Identities = 136/388 (35%), Positives = 207/388 (53%)
Query: 71 ADSSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRE 130
++S++ E+E A P+S W R R RT DV + +FE L R
Sbjct: 14 SESAMAAELEAAPVPAAEPTPASP-WNLRTAHDIGGPRTRTGDVVLAEPADFESLLLSRP 72
Query: 131 LLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQ 190
+L G+ GFERPSP+Q ++IP+ G D++ +AK+GTGKT F AL+ + +N Q
Sbjct: 73 VLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLILENYSTQ 132
Query: 191 VVILVPTRELALQTSQVCKELG-KHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI 249
++IL PTRE+A+Q V +G K ++ V GGT L D RL + H+ VG+PGRI
Sbjct: 133 ILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRL-KKCHIAVGSPGRI 191
Query: 250 LDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQILMFSATFPVTVK 308
L + + ++DEADKLL FQ + + LPA++Q+L SAT+P +
Sbjct: 192 KQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEILA 251
Query: 309 DFKDKYLQKPYVINLM-DELTLKGITQYYAFVEE--------RQKVHCLNTLFSKLQINQ 359
+ +Y++ P + L + +L G+ QYY V +K L LFSK+ NQ
Sbjct: 252 NALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHLQELFSKIPFNQ 311
Query: 360 SIIFCNSVNRVELLAKKITELGY--SCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 417
+++F N +R + LA ++ G+ C + M Q+ R + CR L+ TDL
Sbjct: 312 ALVFSNLHSRAQHLADILSSKGFPTECISGNGNMNQNQRLDAMAKLKQFHCRVLISTDLT 371
Query: 418 TRGIDIQAVNVVINFDFPKNSETYLHRV 445
+RGID + VN+V+N D P + ETY+HR+
Sbjct: 372 SRGIDAEKVNLVVNLDVPLDWETYMHRI 399
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 113/311 (36%), Positives = 183/311 (58%)
Query: 137 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVP 196
E G +PIQE++IP+ L+G DI+ +AK GTGKT AF +P LEKID +++ +Q +I+ P
Sbjct: 22 ENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIVAP 81
Query: 197 TRELALQ-TSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKK 255
TRELALQ T+++ K L + +I V+ GG + + +L H++V TPGR+LD ++
Sbjct: 82 TRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNTHIVVATPGRLLDHIRR 141
Query: 256 GVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYL 315
L + S +V+DEAD++L F +E ++ P ++Q ++FSAT P +K +Y+
Sbjct: 142 ETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQTMLFSATIPKDIKKLAKRYM 201
Query: 316 QKPYVINLM-DELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLA 374
+P +I + +E+T+ I Q +R K L + + Q ++IFC + R L
Sbjct: 202 DEPQMIQVQSEEVTVDTIEQRVIETTDRAKPDALRFVMDRDQPFLAVIFCRTKVRASKLY 261
Query: 375 KKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDF 434
+ LGY+C +H + Q R RV FR + L+ TD+ RG+D+ V V N+D
Sbjct: 262 DNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDI 321
Query: 435 PKNSETYLHRV 445
P++ E+Y+HR+
Sbjct: 322 PEDVESYIHRI 332
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 113/311 (36%), Positives = 183/311 (58%)
Query: 137 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVP 196
E G +PIQE++IP+ L+G DI+ +AK GTGKT AF +P LEKID +++ +Q +I+ P
Sbjct: 22 ENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIVAP 81
Query: 197 TRELALQ-TSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKK 255
TRELALQ T+++ K L + +I V+ GG + + +L H++V TPGR+LD ++
Sbjct: 82 TRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNTHIVVATPGRLLDHIRR 141
Query: 256 GVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYL 315
L + S +V+DEAD++L F +E ++ P ++Q ++FSAT P +K +Y+
Sbjct: 142 ETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQTMLFSATIPKDIKKLAKRYM 201
Query: 316 QKPYVINLM-DELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLA 374
+P +I + +E+T+ I Q +R K L + + Q ++IFC + R L
Sbjct: 202 DEPQMIQVQSEEVTVDTIEQRVIETTDRAKPDALRFVMDRDQPFLAVIFCRTKVRASKLY 261
Query: 375 KKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDF 434
+ LGY+C +H + Q R RV FR + L+ TD+ RG+D+ V V N+D
Sbjct: 262 DNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDI 321
Query: 435 PKNSETYLHRV 445
P++ E+Y+HR+
Sbjct: 322 PEDVESYIHRI 332
>UNIPROTKB|F1SBP3 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:11218
KO:K13131 OMA:VEDYEHY GeneTree:ENSGT00530000062880 EMBL:CU466482
RefSeq:XP_001928579.1 UniGene:Ssc.6364 Ensembl:ENSSSCT00000007430
GeneID:100152786 KEGG:ssc:100152786 Uniprot:F1SBP3
Length = 832
Score = 555 (200.4 bits), Expect = 2.7e-53, P = 2.7e-53
Identities = 134/378 (35%), Positives = 204/378 (53%)
Query: 80 EKTVQSEAAVDPSSQDWKA-RLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEK 138
E+ +A +P+S ++ R R RT DV + +FE L R +L G+
Sbjct: 28 EQVAGQFSASEPASLPVRSLRTAHDVGGPRTRTGDVLLAEPADFESLLLSRPVLEGLRAA 87
Query: 139 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTR 198
GFERPSP+Q ++IP+ G D++ +AK+GTGKT F AL+ + +N Q++IL PTR
Sbjct: 88 GFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTR 147
Query: 199 ELALQTSQVCKELG-KHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGV 257
E+A+Q V +G K ++ V GGT L D RL + H+ VG+PGRI L +
Sbjct: 148 EIAVQIHSVITAIGVKMEGLECHVFIGGTPLSQDKTRL-KKCHIAVGSPGRIKQLIELDY 206
Query: 258 CILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQ 316
+ ++DEADKLL FQ + + LPA++Q+L SAT+P + + KY++
Sbjct: 207 LNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMR 266
Query: 317 KPYVINL-MDELTLKGITQYYAFVEE--------RQKVHCLNTLFSKLQINQSIIFCNSV 367
+P + L + +L G+ QYY V +K L LFSK+ NQ+++F N
Sbjct: 267 EPTFVRLNSSDPSLIGLKQYYKVVNSYPLAHKIFEEKAQHLQELFSKIPFNQALVFSNLH 326
Query: 368 NRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVN 427
+R + LA ++ G+ I M Q+ R + CR L+ TDL +RGID + VN
Sbjct: 327 SRAQHLADILSSKGFPAVCISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVN 386
Query: 428 VVINFDFPKNSETYLHRV 445
+V+N D P + ETY+HR+
Sbjct: 387 LVVNLDVPLDWETYMHRI 404
>UNIPROTKB|A4RBS3 [details] [associations]
symbol:SUB2 "ATP-dependent RNA helicase SUB2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM000230 EMBL:CM001237 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12812
RefSeq:XP_003720935.1 ProteinModelPortal:A4RBS3 SMR:A4RBS3
STRING:A4RBS3 PRIDE:A4RBS3 EnsemblFungi:MGG_02806T0 GeneID:2682359
KEGG:mgr:MGG_02806 OrthoDB:EOG4H49C6 Uniprot:A4RBS3
Length = 436
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 124/382 (32%), Positives = 204/382 (53%)
Query: 71 ADSSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRE 130
A+ ++D ++ + + P++ + ++ + F D+ LK E
Sbjct: 3 AEEDLIDYSDEELNTNETAAPAADSNGKKGELAAGGNVDKKGSYVGIHSTGFRDFLLKPE 62
Query: 131 LLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQ 190
LL I + GFE PS +Q+ IP A+ G DI+ +AK+G GKTA F + L++++
Sbjct: 63 LLRAIGDCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGECS 122
Query: 191 VVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDDIMRLYQPV---HLLVGTP 246
V+++ TRELA Q K++ +I+ V GGT ++ D L H++VGTP
Sbjct: 123 VLVMCHTRELAFQIRNEYNRFSKYMPDIKTGVFFGGTPIQKDAELLKNKETHPHIIVGTP 182
Query: 247 GRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQILMFSATFPV 305
GR+ L + L + V+DE DK+L + + V+++ R P +Q++MFSAT
Sbjct: 183 GRLNALVRDKFLRLSSVRIFVLDECDKMLDQIDMRRDVQEIFRATPQQKQVMMFSATLSD 242
Query: 306 TVKDFKDKYLQKP--YVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIF 363
+K K++Q P + ++ +LTL G+ QY+ +EE++K LN L LQ NQ IIF
Sbjct: 243 EIKPICKKFMQNPTEHYVDEDTKLTLHGLQQYFVALEEKEKNRKLNELLDDLQFNQVIIF 302
Query: 364 CNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDI 423
S R L K + E + +H+ + Q+ R R + +F+ R V TD+F RGIDI
Sbjct: 303 VKSTLRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDI 362
Query: 424 QAVNVVINFDFPKNSETYLHRV 445
+ +N+ IN+D P ++++YLHRV
Sbjct: 363 ERINLAINYDMPADADSYLHRV 384
>UNIPROTKB|J9NU36 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
Length = 423
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 112/304 (36%), Positives = 184/304 (60%)
Query: 145 PIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQT 204
P ++ +I + G D++A+A++GTGKTA F I L++I+ D Q ++L PTRELA Q
Sbjct: 74 PTRQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQI 133
Query: 205 SQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPV-HLLVGTPGRILDLSKKGVCILKDC 263
+V LG ++ GGT+++ ++ +L H++VGTPGR+ D+ + K
Sbjct: 134 QKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYI 193
Query: 264 SMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VIN 322
M V+DEAD++LS F+ + + + L +N Q+++ SAT P V + K+++ P ++
Sbjct: 194 KMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILV 253
Query: 323 LMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELG 381
+ELTL+GI Q+Y VE E K+ L L+ L I Q++IF N+ +V+ L +K+
Sbjct: 254 KKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARD 313
Query: 382 YSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETY 441
++ +H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y
Sbjct: 314 FTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 373
Query: 442 LHRV 445
+HR+
Sbjct: 374 IHRI 377
>UNIPROTKB|F1PXG6 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:AAEX03011088 EMBL:AAEX03011089
Ensembl:ENSCAFT00000021679 Uniprot:F1PXG6
Length = 825
Score = 553 (199.7 bits), Expect = 4.2e-53, P = 4.2e-53
Identities = 134/372 (36%), Positives = 201/372 (54%)
Query: 85 SEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPS 144
SEAA P+ R + R RT DV + +FE L R +L G+ GFERPS
Sbjct: 32 SEAAPGPARS---LRTAHDVSGPRARTGDVLLAEPADFESLLLSRPVLDGLRAAGFERPS 88
Query: 145 PIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQT 204
P+Q ++IP+ G D++ +AK+GTGKT F AL+ + +N Q++IL PTRE+A+Q
Sbjct: 89 PVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLENQSTQILILAPTREIAVQI 148
Query: 205 SQVCKELG-KHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDC 263
V +G K ++ V GGT L D RL + H+ VG+PGRI L +
Sbjct: 149 HSVITAIGIKMEGLECHVFIGGTPLSQDKTRL-KKCHIAVGSPGRIKQLIELDYLNPGSI 207
Query: 264 SMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVIN 322
+ ++DEADKLL FQ + + LPA++Q+L SAT+P + + KY++ P +
Sbjct: 208 RLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVR 267
Query: 323 L-MDELTLKGITQYYAFVEE--------RQKVHCLNTLFSKLQINQSIIFCNSVNRVELL 373
L + +L G+ QYY V +K L LFS++ NQ+++F N +R + L
Sbjct: 268 LNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKAQHLQELFSRIPFNQALVFSNLHSRAQHL 327
Query: 374 AKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFD 433
A ++ G+ I M Q+ R ++ CR L+ TDL +RGID + VN+V+N D
Sbjct: 328 ADILSAKGFPAECISGNMNQNQRLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLD 387
Query: 434 FPKNSETYLHRV 445
P + ETY+HR+
Sbjct: 388 VPLDWETYMHRI 399
>UNIPROTKB|J9P828 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:AAEX03011088 EMBL:AAEX03011089
Ensembl:ENSCAFT00000050085 Uniprot:J9P828
Length = 825
Score = 553 (199.7 bits), Expect = 4.2e-53, P = 4.2e-53
Identities = 134/372 (36%), Positives = 201/372 (54%)
Query: 85 SEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPS 144
SEAA P+ R + R RT DV + +FE L R +L G+ GFERPS
Sbjct: 32 SEAAPGPARS---LRTAHDVSGPRARTGDVLLAEPADFESLLLSRPVLDGLRAAGFERPS 88
Query: 145 PIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQT 204
P+Q ++IP+ G D++ +AK+GTGKT F AL+ + +N Q++IL PTRE+A+Q
Sbjct: 89 PVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLENQSTQILILAPTREIAVQI 148
Query: 205 SQVCKELG-KHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDC 263
V +G K ++ V GGT L D RL + H+ VG+PGRI L +
Sbjct: 149 HSVITAIGIKMEGLECHVFIGGTPLSQDKTRL-KKCHIAVGSPGRIKQLIELDYLNPGSI 207
Query: 264 SMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVIN 322
+ ++DEADKLL FQ + + LPA++Q+L SAT+P + + KY++ P +
Sbjct: 208 RLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVR 267
Query: 323 L-MDELTLKGITQYYAFVEE--------RQKVHCLNTLFSKLQINQSIIFCNSVNRVELL 373
L + +L G+ QYY V +K L LFS++ NQ+++F N +R + L
Sbjct: 268 LNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKAQHLQELFSRIPFNQALVFSNLHSRAQHL 327
Query: 374 AKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFD 433
A ++ G+ I M Q+ R ++ CR L+ TDL +RGID + VN+V+N D
Sbjct: 328 ADILSAKGFPAECISGNMNQNQRLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLD 387
Query: 434 FPKNSETYLHRV 445
P + ETY+HR+
Sbjct: 388 VPLDWETYMHRI 399
>UNIPROTKB|Q9UHI6 [details] [associations]
symbol:DDX20 "Probable ATP-dependent RNA helicase DDX20"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=TAS]
[GO:0005856 "cytoskeleton" evidence=TAS] [GO:0000387 "spliceosomal
snRNP assembly" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0034660 "ncRNA metabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0017053
GO:GO:0005654 GO:GO:0006917 GO:GO:0005856 GO:GO:0003677
GO:GO:0005681 GO:GO:0000244 GO:GO:0000122 GO:GO:0043065
GO:GO:0015030 GO:GO:0034660 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:AF171063 EMBL:AF106019 EMBL:AK001506
EMBL:AL049557 EMBL:BC011556 EMBL:AL133598 IPI:IPI00005904
PIR:T43476 RefSeq:NP_009135.4 UniGene:Hs.591405 PDB:2OXC PDB:3B7G
PDBsum:2OXC PDBsum:3B7G ProteinModelPortal:Q9UHI6 SMR:Q9UHI6
DIP:DIP-32606N IntAct:Q9UHI6 MINT:MINT-96973 STRING:Q9UHI6
PhosphoSite:Q9UHI6 DMDM:12643886 PaxDb:Q9UHI6 PeptideAtlas:Q9UHI6
PRIDE:Q9UHI6 DNASU:11218 Ensembl:ENST00000369702 GeneID:11218
KEGG:hsa:11218 UCSC:uc001ebs.3 CTD:11218 GeneCards:GC01P112298
HGNC:HGNC:2743 HPA:CAB015427 HPA:HPA005516 HPA:HPA023541 MIM:606168
neXtProt:NX_Q9UHI6 PharmGKB:PA27209 HOGENOM:HOG000112184
HOVERGEN:HBG051330 InParanoid:Q9UHI6 KO:K13131 OMA:VEDYEHY
OrthoDB:EOG4SF95N PhylomeDB:Q9UHI6 EvolutionaryTrace:Q9UHI6
GenomeRNAi:11218 NextBio:42699 ArrayExpress:Q9UHI6 Bgee:Q9UHI6
CleanEx:HS_DDX20 Genevestigator:Q9UHI6 GermOnline:ENSG00000064703
Uniprot:Q9UHI6
Length = 824
Score = 548 (198.0 bits), Expect = 1.5e-52, P = 1.5e-52
Identities = 128/349 (36%), Positives = 193/349 (55%)
Query: 108 RYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNG 167
R RT DV + +FE L R +L G+ GFERPSP+Q ++IP+ G D++ +AK+G
Sbjct: 50 RTRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSG 109
Query: 168 TGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELG-KHLNIQVMVTTGGT 226
TGKT F AL+ + +N Q++IL PTRE+A+Q V +G K ++ V GGT
Sbjct: 110 TGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169
Query: 227 SLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQ 285
L D RL + H+ VG+PGRI L + + ++DEADKLL FQ +
Sbjct: 170 PLSQDKTRL-KKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINW 228
Query: 286 LIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL-MDELTLKGITQYYAFVEE--- 341
+ LPA++Q+L SAT+P + + KY++ P + L + +L G+ QYY V
Sbjct: 229 IYSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVVNSYPL 288
Query: 342 -----RQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHR 396
+K L LFS++ NQ+++F N +R + LA ++ G+ I M Q+ R
Sbjct: 289 AHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQR 348
Query: 397 NRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
++ CR L+ TDL +RGID + VN+V+N D P + ETY+HR+
Sbjct: 349 LDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRI 397
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 116/331 (35%), Positives = 187/331 (56%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F+ L ++L + E+G+ P+PIQ+++IP L G D++A A+ GTGKTA F +P L+
Sbjct: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62
Query: 182 I------DQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRL 235
+ + ++ +IL PTRELA Q + ++ K+LNI+ +V GG S+ +M+L
Sbjct: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122
Query: 236 YQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQ 295
V +LV TPGR+LDL + L +LV+DEAD++L F + +++ LPA RQ
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182
Query: 296 ILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKG-ITQYYAFVEERQKVHCLNTLFSK 354
L+FSATF +K +K L P I + T +TQ+ FV++++K L+ + K
Sbjct: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGK 242
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
Q ++F + + LA+++ + G IH Q R R DF++G R LV T
Sbjct: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302
Query: 415 DLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
D+ RG+DI+ + V+N++ P E Y+HR+
Sbjct: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>UNIPROTKB|F1NTS2 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 IPI:IPI00588271 EMBL:AADN02041229
EMBL:AADN02041230 ProteinModelPortal:F1NTS2
Ensembl:ENSGALT00000038969 OMA:KTRNGVD ArrayExpress:F1NTS2
Uniprot:F1NTS2
Length = 414
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 115/336 (34%), Positives = 197/336 (58%)
Query: 113 DVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTA 172
DVT T F+ L+ +LL GI+ GFE+PS IQ+ +I + G D++A++++GTGKTA
Sbjct: 37 DVTPT----FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 92
Query: 173 AFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKD-D 231
F I L+ +D Q +IL PTRELA+Q +V + ++ + G+ ++ D
Sbjct: 93 TFSISVLQCLDIQVRETQALILAPTRELAVQIQKVGTSKSLPVKMKELHKAMGSFKQEVD 152
Query: 232 IMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLP 291
+ ++ + G ++L + ++ + MLV+DEAD++L+ F+ + + R+LP
Sbjct: 153 LPAGHEVARCISGIQLQLLYMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLP 212
Query: 292 ANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLN 349
Q+++ SAT P + + +K++ P ++ DELTL+GI Q++ VE E K L
Sbjct: 213 PATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLC 272
Query: 350 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 409
L+ L I Q++IFCN+ +V+ L +K+ E ++ +H M Q R + +FR+GA R
Sbjct: 273 DLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASR 332
Query: 410 NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
L+ TD++ RG+D+ V+++IN+D P N E Y+HR+
Sbjct: 333 VLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI 368
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 116/332 (34%), Positives = 184/332 (55%)
Query: 121 EFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 180
+F D L LL + +KG+E PSPIQ ++IP ++G D++A A+ GTGKTA F +P L+
Sbjct: 7 KFTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLPLLQ 66
Query: 181 KIDQD------NNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMR 234
++ +N ++ +IL PTRELA Q S+ + GK+LN+ MV GG + I R
Sbjct: 67 RLSSSKGNKVSSNNVRALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINPQIAR 126
Query: 235 LYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANR 294
L Q V +LV TPGR+LDL + + ++DEAD++L F +++L+ LP +R
Sbjct: 127 LRQGVDVLVATPGRLLDLYNQRAVKFSQLEVFILDEADRMLDMGFIRDIKKLMTALPKDR 186
Query: 295 QILMFSATFPVTVKDFKDKYLQKPYVINL-MDELTLKGITQYYAFVEERQKVHCLNTLFS 353
Q L+FSATF ++ + P I++ + T + +TQ+ V++++K L L
Sbjct: 187 QNLLFSATFSPEIRALAKGMVNNPLEISVDAENSTAEKVTQWLTAVDKKRKPAVLTHLIK 246
Query: 354 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 413
+ Q ++F + + L K + G + IH Q R + F++G+ + LV
Sbjct: 247 ENNWQQVLVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKALAAFKDGSVKILVA 306
Query: 414 TDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
TD+ RGIDI + V+NFD P E Y+HR+
Sbjct: 307 TDIAARGIDIDLLPQVVNFDLPNVPEDYVHRI 338
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 120/333 (36%), Positives = 182/333 (54%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
FE L ELL I E+G+ P+P+Q ++IP+ L D++ A+ GTGKTA F +P L++
Sbjct: 12 FEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQR 71
Query: 182 I--------DQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIM 233
+ VI+ +IL PTRELA+Q + + GK+L ++ V GG S+K I
Sbjct: 72 LFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQIN 131
Query: 234 RLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPAN 293
L + V +LV TPGR+LDL +GV L V+DEAD++L F P + ++++ LP +
Sbjct: 132 HLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPES 191
Query: 294 RQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKG-ITQYYAFVEERQKVHCLNTLF 352
RQ L+FSATF +K+ DK L P +I + T IT V+ ++K L+ +
Sbjct: 192 RQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPVDRQRKRELLSFMI 251
Query: 353 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 412
Q ++F + + L++++ G S IH Q R R F+ G R LV
Sbjct: 252 GSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVLV 311
Query: 413 CTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
TD+ RG+DI + VINF+ P ++ Y+HRV
Sbjct: 312 ATDVAARGLDIDKLPHVINFELPDAAKDYVHRV 344
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 120/333 (36%), Positives = 182/333 (54%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
FE L ELL I E+G+ P+P+Q ++IP+ L D++ A+ GTGKTA F +P L++
Sbjct: 12 FEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQR 71
Query: 182 I--------DQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIM 233
+ VI+ +IL PTRELA+Q + + GK+L ++ V GG S+K I
Sbjct: 72 LFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQIN 131
Query: 234 RLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPAN 293
L + V +LV TPGR+LDL +GV L V+DEAD++L F P + ++++ LP +
Sbjct: 132 HLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPES 191
Query: 294 RQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKG-ITQYYAFVEERQKVHCLNTLF 352
RQ L+FSATF +K+ DK L P +I + T IT V+ ++K L+ +
Sbjct: 192 RQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPVDRQRKRELLSFMI 251
Query: 353 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 412
Q ++F + + L++++ G S IH Q R R F+ G R LV
Sbjct: 252 GSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVLV 311
Query: 413 CTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
TD+ RG+DI + VINF+ P ++ Y+HRV
Sbjct: 312 ATDVAARGLDIDKLPHVINFELPDAAKDYVHRV 344
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 115/324 (35%), Positives = 177/324 (54%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F +Y L +E+ + G+E P+ +Q E IP+AL D++ +++ G+GKTA+F IP E
Sbjct: 6 FSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCEM 65
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
++ + N Q ++L PTRELA+Q + +G+ I+ G + + L Q H+
Sbjct: 66 VEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTHI 125
Query: 242 LVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSA 301
+VGTPGR+LD +KG L+ LV+DEAD++L+ F VE +I LP R ++FSA
Sbjct: 126 VVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFSA 185
Query: 302 TFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQS 360
T P V+ Y+ P I + +T I V E +K+ L + + +
Sbjct: 186 TLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEVREEEKLSLLKDVTTIENPDSC 245
Query: 361 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 420
IIFC + V+ + +++ + Y C IH M+Q+ R V DFR G R LV TD+ RG
Sbjct: 246 IIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVAARG 305
Query: 421 IDIQAVNVVINFDFPKNSETYLHR 444
IDI + VIN+D P E+Y+HR
Sbjct: 306 IDIDNITHVINYDIPLEKESYVHR 329
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 115/324 (35%), Positives = 177/324 (54%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F +Y L +E+ + G+E P+ +Q E IP+AL D++ +++ G+GKTA+F IP E
Sbjct: 6 FSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCEM 65
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
++ + N Q ++L PTRELA+Q + +G+ I+ G + + L Q H+
Sbjct: 66 VEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTHI 125
Query: 242 LVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSA 301
+VGTPGR+LD +KG L+ LV+DEAD++L+ F VE +I LP R ++FSA
Sbjct: 126 VVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFSA 185
Query: 302 TFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQS 360
T P V+ Y+ P I + +T I V E +K+ L + + +
Sbjct: 186 TLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEVREEEKLSLLKDVTTIENPDSC 245
Query: 361 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 420
IIFC + V+ + +++ + Y C IH M+Q+ R V DFR G R LV TD+ RG
Sbjct: 246 IIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVAARG 305
Query: 421 IDIQAVNVVINFDFPKNSETYLHR 444
IDI + VIN+D P E+Y+HR
Sbjct: 306 IDIDNITHVINYDIPLEKESYVHR 329
>POMBASE|SPAC823.08c [details] [associations]
symbol:SPAC823.08c "ATP-dependent RNA helicase Rrp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC823.08c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P RefSeq:NP_593835.1 ProteinModelPortal:Q9P6N8
SMR:Q9P6N8 STRING:Q9P6N8 EnsemblFungi:SPAC823.08c.1 GeneID:2543571
KEGG:spo:SPAC823.08c NextBio:20804578 Uniprot:Q9P6N8
Length = 465
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 115/327 (35%), Positives = 192/327 (58%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F++ + EL + GF+ P+PIQ+E+IP+ L D++ A+ G+GKTAAF +P +++
Sbjct: 48 FKELGVIDELCEACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQE 107
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
+ + + V+L PTRELA Q S+ + +G + ++ +V GG + + L + H+
Sbjct: 108 LWNNPSPFFAVVLAPTRELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQAVALSKKPHV 167
Query: 242 LVGTPGRILDL--SKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMF 299
LV TPGR++D + KG LK+ L+MDEAD+LL +F P ++++++ +P R+ L+F
Sbjct: 168 LVCTPGRLMDHLENTKGFS-LKNLKYLIMDEADRLLDMDFGPIIDKILKIIPHERRTLLF 226
Query: 300 SATFPVTVKDFKDKYLQKPYVINLMDEL-TLKGITQYYAFVEERQKVHCLNTLFSKLQIN 358
SAT V+ + L +P + + + T+ + Q Y F + K L L ++L N
Sbjct: 227 SATMTSKVEKLQRASLHQPVRVAVSSKFSTVDTLIQRYLFFPFKHKDTYLVYLVNELAGN 286
Query: 359 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 418
IIF +VN + LA + LG+S +H ++ Q +R + F++GA LV TD+
Sbjct: 287 SIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARSTLVATDVAA 346
Query: 419 RGIDIQAVNVVINFDFPKNSETYLHRV 445
RG+DI V+VVIN+D P +S+ Y+HRV
Sbjct: 347 RGLDIPLVDVVINYDIPTDSKAYIHRV 373
>SGD|S000002242 [details] [associations]
symbol:SUB2 "Component of the TREX complex required for
nuclear mRNA export" species:4932 "Saccharomyces cerevisiae"
[GO:0006406 "mRNA export from nucleus" evidence=IMP;IDA;IPI]
[GO:0000346 "transcription export complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005681 "spliceosomal
complex" evidence=IEA;TAS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IGI;ISA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0000781 "chromosome, telomeric region"
evidence=IPI] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002242 GO:GO:0005524
EMBL:BK006938 GO:GO:0005681 GO:GO:0003723 GO:GO:0006348
GO:GO:0006368 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000781 GO:GO:0004004
GO:GO:0006283 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0031124
GeneTree:ENSGT00660000095549 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:Z74132 EMBL:AY692907 PIR:S67620
RefSeq:NP_010199.1 ProteinModelPortal:Q07478 SMR:Q07478
DIP:DIP-5343N IntAct:Q07478 MINT:MINT-526164 STRING:Q07478
PaxDb:Q07478 PeptideAtlas:Q07478 EnsemblFungi:YDL084W GeneID:851475
KEGG:sce:YDL084W CYGD:YDL084w OMA:NNPLINC NextBio:968777
Genevestigator:Q07478 GermOnline:YDL084W Uniprot:Q07478
Length = 446
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 120/334 (35%), Positives = 182/334 (54%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F+D+ LK EL I + GFE PS +Q+ +IP ++ G+D+L +AK+G GKTA F + L++
Sbjct: 64 FKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQ 123
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDDIMRLYQP-- 238
+D + VV++ RELA Q K++ +++ V GGT + D L
Sbjct: 124 LDPVPGEVAVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPISKDAELLKNKDT 183
Query: 239 -VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQI 296
H++V TPGR+ L ++ L V+DE DK+L + + V+++ R P ++Q+
Sbjct: 184 APHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRATPRDKQV 243
Query: 297 LMFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSK 354
+MFSAT ++ ++LQ P I + DE LTL G+ QYY +EER+K L L
Sbjct: 244 MMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQLLDD 303
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHR---NRVFHDFRNGACRNL 411
L+ NQ IIF S R L K + + +H M Q+ R + F DF C
Sbjct: 304 LEFNQVIIFVKSTTRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDFEKRIC--- 360
Query: 412 VCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
V TD+F RGIDI+ +N+ IN+D ++ YLHRV
Sbjct: 361 VSTDVFGRGIDIERINLAINYDLTNEADQYLHRV 394
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 119/317 (37%), Positives = 173/317 (54%)
Query: 137 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI------DQDNNVIQ 190
E G+ P+P+Q +IP L+G D+LA A G+GKTAAF +P L+++ D+ V++
Sbjct: 26 ELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQRLSEAKSADKSAGVVR 85
Query: 191 VVILVPTRELALQTSQVCKELGKHLN--IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGR 248
++LVPTRELA Q + H N ++++ GG S+ + L +LV TPGR
Sbjct: 86 CLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNLQMQSLRAGADVLVATPGR 145
Query: 249 ILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVK 308
+LDL L S V+DEAD++LS F +EQ++ LP +Q L+FSATFP V+
Sbjct: 146 LLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQVLAALPRQKQTLLFSATFPEEVR 205
Query: 309 DFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVN 368
K L +P +L E I Q V QK L L + Q +Q++IF ++ N
Sbjct: 206 ALTTKLLHQPLEYHLQSEQE-STIEQRVITVNREQKTALLAHLIKQHQWSQALIFVSAKN 264
Query: 369 RVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNV 428
LA+K+++ G S H Q R RV F+NG L+ TD+ RGIDI + V
Sbjct: 265 TCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGEISVLIATDIAARGIDIDKLPV 324
Query: 429 VINFDFPKNSETYLHRV 445
VINFD P++ Y+HR+
Sbjct: 325 VINFDLPRSPADYMHRI 341
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 119/317 (37%), Positives = 173/317 (54%)
Query: 137 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI------DQDNNVIQ 190
E G+ P+P+Q +IP L+G D+LA A G+GKTAAF +P L+++ D+ V++
Sbjct: 26 ELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQRLSEAKSADKSAGVVR 85
Query: 191 VVILVPTRELALQTSQVCKELGKHLN--IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGR 248
++LVPTRELA Q + H N ++++ GG S+ + L +LV TPGR
Sbjct: 86 CLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNLQMQSLRAGADVLVATPGR 145
Query: 249 ILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVK 308
+LDL L S V+DEAD++LS F +EQ++ LP +Q L+FSATFP V+
Sbjct: 146 LLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQVLAALPRQKQTLLFSATFPEEVR 205
Query: 309 DFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVN 368
K L +P +L E I Q V QK L L + Q +Q++IF ++ N
Sbjct: 206 ALTTKLLHQPLEYHLQSEQE-STIEQRVITVNREQKTALLAHLIKQHQWSQALIFVSAKN 264
Query: 369 RVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNV 428
LA+K+++ G S H Q R RV F+NG L+ TD+ RGIDI + V
Sbjct: 265 TCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGEISVLIATDIAARGIDIDKLPV 324
Query: 429 VINFDFPKNSETYLHRV 445
VINFD P++ Y+HR+
Sbjct: 325 VINFDLPRSPADYMHRI 341
>ZFIN|ZDB-GENE-020419-30 [details] [associations]
symbol:ddx19 "DEAD/H (Asp-Glu-Ala-Asp/His) box
polypeptide 19 (DBP5 homolog, yeast)" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-020419-30 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
HSSP:P10081 EMBL:AY099536 IPI:IPI00481107 RefSeq:NP_775365.1
UniGene:Dr.116877 ProteinModelPortal:Q8JGR1 SMR:Q8JGR1
STRING:Q8JGR1 GeneID:192339 KEGG:dre:192339 CTD:192339
InParanoid:Q8JGR1 NextBio:20797174 ArrayExpress:Q8JGR1
Uniprot:Q8JGR1
Length = 487
Score = 496 (179.7 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 119/337 (35%), Positives = 195/337 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK +LL G++ GF RPS IQE ++P+ L +++A++++ TGKTAAF + L
Sbjct: 102 FEELRLKPQLLQGVYAMGFNRPSKIQETALPMMLAEPPQNLIAQSQSRTGKTAAFVLAML 161
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDDIMRLYQP 238
+D +N + + + PT ELALQT +V +++GKH +Q++ G L+ +L +
Sbjct: 162 SHVDTENKWPECLCVCPTYELALQTGKVIEQMGKHYPEVQLVYAIRGNKLERGA-KLQEQ 220
Query: 239 VHLLVGTPGRILDLSKKGVCI-LKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANRQI 296
+ ++GTPG +LD +K I K + V+DEAD +++ + Q ++ R LP Q+
Sbjct: 221 I--VIGTPGTVLDWCQKLKFIDPKKIKVFVLDEADVMIATQGHQDQSVRIQRMLPKTCQM 278
Query: 297 LMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ-KVHCLNTLFSK 354
L+FSATF TV +F + + P +I L +E TL I QYY ++ K L ++
Sbjct: 279 LLFSATFEETVWNFAKRIVPDPNIIKLKREEETLDTIKQYYVICNSKEEKFQALCNIYGA 338
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
+ I Q++IFC++ LA +++ G+ + +M + R V FR+G + LV T
Sbjct: 339 ITIAQAMIFCHTRKTAGWLAGELSREGHQVALLSGEMQVEQRAAVIERFRDGKEKVLVTT 398
Query: 415 DLFTRGIDIQAVNVVINFDFP------KNSETYLHRV 445
++ RGID++ V+VVINFD P ++ETYLHR+
Sbjct: 399 NVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRI 435
Score = 46 (21.3 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 76 VDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFED 124
VDE E +S + + S ++ K + A T +TE T ++ E+
Sbjct: 10 VDEQEAAAESISTLQISEKEEKPTAEANGAKTEAKTEAKTEANADKTEE 58
>UNIPROTKB|E1BSE5 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:AADN02041229
EMBL:AADN02041230 IPI:IPI00819993 Ensembl:ENSGALT00000013903
ArrayExpress:E1BSE5 Uniprot:E1BSE5
Length = 402
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 115/335 (34%), Positives = 194/335 (57%)
Query: 113 DVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTA 172
DVT T F+ L+ +LL GI+ GFE+PS IQ+ +I + G D++A++++GTGKTA
Sbjct: 36 DVTPT----FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 91
Query: 173 AFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDI 232
F I L+ +D Q +IL PTRELA+Q + G+ + + V +S +
Sbjct: 92 TFSISVLQCLDIQVRETQALILAPTRELAVQIQKSLLATGE-VPVPPPVKCTVSSWEQCR 150
Query: 233 MRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPA 292
+ + + +L +D+ ++ + MLV+DEAD++L+ F+ + + R+LP
Sbjct: 151 LACFLSLFILQSE----IDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 206
Query: 293 NRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNT 350
Q+++ SAT P + + +K++ P ++ DELTL+GI Q++ VE E K L
Sbjct: 207 ATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCD 266
Query: 351 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRN 410
L+ L I Q++IFCN+ +V+ L +K+ E ++ +H M Q R + +FR+GA R
Sbjct: 267 LYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRV 326
Query: 411 LVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
L+ TD++ RG+D+ V+++IN+D P N E Y+HR+
Sbjct: 327 LISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI 361
>UNIPROTKB|J3KT12 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1
ProteinModelPortal:J3KT12 Ensembl:ENST00000582746 Uniprot:J3KT12
Length = 341
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 119/335 (35%), Positives = 191/335 (57%)
Query: 92 SSQDWKARLKIPPADTRYRTEDVTATKGNE----FEDYFLKRELLMGIFEKGFERPSPIQ 147
+SQD ++R P E V + NE F+D L LL GI+ GFE+PS IQ
Sbjct: 3 ASQDSRSRDNGPDG---MEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQ 59
Query: 148 EESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQV 207
+ +I + G D++A+A++GTGKTA F I L++I+ D Q ++L PTRELA Q +V
Sbjct: 60 QRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKV 119
Query: 208 CKELGKHLNIQVMVTTGGTSLKDDIMRLYQPV-HLLVGTPGRILDLSKKGVCILKDCSML 266
LG ++ GGT+++ ++ +L H++VGTPGR+ D+ + K M
Sbjct: 120 VMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMF 179
Query: 267 VMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMD 325
V+DEAD++LS F+ + + + L +N Q+++ SAT P V + K+++ P ++ +
Sbjct: 180 VLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKE 239
Query: 326 ELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSC 384
ELTL+GI Q+Y VE E K+ L L+ L I Q++IF N+ +V+ L +K+ ++
Sbjct: 240 ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTV 299
Query: 385 FYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 419
+H M Q R+ + +FR+G+ R L+ TDL R
Sbjct: 300 SAMHGDMDQKERDVIMREFRSGSSRVLITTDLLNR 334
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 109/326 (33%), Positives = 182/326 (55%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F D LK +L + + G+E+PSPIQ E IP L G D+L A+ G+GKTAAF +P L+
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPVH 240
+D + Q+++L PTRELA+Q ++ + KH+ + V+ GG + L Q
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQ 127
Query: 241 LLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFS 300
++VGTPGR+LD K+G L S LV+DEAD++L F VE ++ +P Q +FS
Sbjct: 128 IVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFS 187
Query: 301 ATFPVTVKDFKDKYLQKPYVINLMDELTLK-GITQYYAFVEERQKVHCLNTLFSKLQINQ 359
AT P ++ +++++P + + +T + I+Q Y V +K L +
Sbjct: 188 ATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFLEAEDFDA 247
Query: 360 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 419
+IIF + N +A+ + GY+ ++ M Q R + ++G L+ TD+ R
Sbjct: 248 AIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAAR 307
Query: 420 GIDIQAVNVVINFDFPKNSETYLHRV 445
G+D++ +++V+N+D P +SE+Y+HR+
Sbjct: 308 GLDVERISLVVNYDIPMDSESYVHRI 333
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 115/328 (35%), Positives = 178/328 (54%)
Query: 120 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 179
N F LK ELL + GF +PIQ +S+P L G D++ + K G+GKTAAF + L
Sbjct: 4 NSFAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVL 63
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDDIMRLYQP 238
++ +Q ++L PTRELA Q + + LG+ + NI+V+ GG + I L
Sbjct: 64 SNLNVKRFRVQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSLEHG 123
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
H+LVGTPGRILD K L + + LV+DEAD++L FQ ++E +I PA RQ L+
Sbjct: 124 AHILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQTLL 183
Query: 299 FSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQI 357
FSAT+P +++ + +I + I QY+ VE + L TL Q
Sbjct: 184 FSATYPASIEQIAQSVTRNALMIKVEATHDTSSIRQYFYKVEGSAARDEALETLLLHHQP 243
Query: 358 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 417
S++FCN+ V+ +A + + G+S +H M Q R++ F N + LV TD+
Sbjct: 244 TSSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVATDVA 303
Query: 418 TRGIDIQAVNVVINFDFPKNSETYLHRV 445
RG+D+ ++ V N+D ++ E ++HR+
Sbjct: 304 ARGLDVDNLDAVFNYDLSRDPEVHVHRI 331
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 110/326 (33%), Positives = 176/326 (53%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F + L LL + E G+E+P+PIQ SI + G DIL +A+ GTGKT AF +P L K
Sbjct: 8 FRELGLSENLLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLNK 67
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDDIMRLYQPVH 240
+ Q+++L PTRELA+Q ++ K + N V+ GG S++ + L +
Sbjct: 68 VTSQTTP-QILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQLNALKRGPQ 126
Query: 241 LLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFS 300
++VGTPGR++D ++G L+ LV+DEAD++L F +E ++ P RQ+ +FS
Sbjct: 127 VIVGTPGRVMDHMRRGTLKLETLQALVLDEADEMLKMGFIDDIEWILEHTPPQRQLALFS 186
Query: 301 ATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQ 359
AT P +K +K+L+ I++ T+ I Q + V + K+ L +
Sbjct: 187 ATMPEQIKRVANKHLKNATNISIAASHTTVDSIEQRFVQVSQHNKLEALVRVLEVENTEG 246
Query: 360 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 419
IIF + N LA+K+ GY+ +H M Q R R +NG L+ TD+ R
Sbjct: 247 IIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVEQLKNGKLDILIATDVAAR 306
Query: 420 GIDIQAVNVVINFDFPKNSETYLHRV 445
G+D++ + V+N+D P ++E Y+HR+
Sbjct: 307 GLDVERIGHVVNYDIPYDTEAYVHRI 332
>UNIPROTKB|F1P5C0 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917
"induction of apoptosis" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:AADN02044991 IPI:IPI00582962
Ensembl:ENSGALT00000040229 Uniprot:F1P5C0
Length = 753
Score = 520 (188.1 bits), Expect = 8.4e-50, P = 8.4e-50
Identities = 124/339 (36%), Positives = 186/339 (54%)
Query: 120 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 179
++F L +L G+ GF RPSP+Q ++IP+ G D++ +AK+GTGKT F AL
Sbjct: 5 SDFGSLLLSPPVLAGLEAAGFHRPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIAL 64
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELG-KHLNIQVMVTTGGTSLKDDIMRLYQP 238
+ + D+ QV+IL PTRE+A+Q V +G K ++ V GGT L D +RL +
Sbjct: 65 DALLLDSPATQVLILAPTREIAVQIHAVITTIGIKMEGLECHVFIGGTPLSQDKVRL-KK 123
Query: 239 VHLLVGTP--GRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQ 295
H+ VG+P GRI L + + ++DEADKLL FQ + + LPAN+Q
Sbjct: 124 CHIAVGSPDVGRIKQLIELDYLNTASIRLFILDEADKLLEEGSFQEQINWIYSSLPANKQ 183
Query: 296 ILMFSATFPVTVKDFKDKYLQKPYVINLMD-ELTLKGITQYYAFVEER--------QKVH 346
+L SAT+P ++ + Y+++P + L + +L G+ QYY V +K
Sbjct: 184 MLAVSATYPESLANALTMYMREPTFVRLNPTDPSLIGLKQYYKIVNSHPLPHKTFEEKTQ 243
Query: 347 CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 406
L LFSK+ NQ+++F N +R + LA+ +T G+ I M Q R +
Sbjct: 244 HLQELFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISGSMNQSQRLDAMAKLKQF 303
Query: 407 ACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
CR L+ TDL +RGID + VN+VIN D P + ETY+HR+
Sbjct: 304 HCRVLISTDLTSRGIDAEKVNLVINLDVPVDWETYMHRI 342
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 494 (179.0 bits), Expect = 1.9e-49, Sum P(3) = 1.9e-49
Identities = 108/328 (32%), Positives = 185/328 (56%)
Query: 127 LKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDN 186
+ ++L + + +E+P+PIQ ++IP ++G D++ AK G+GKT AF +P I
Sbjct: 364 ISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQR 423
Query: 187 NVIQV-----VILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
V + VI+ PTRELALQ ++ CK+ K L ++V+ GGT + + I L + +
Sbjct: 424 PVGEAEGPLAVIMTPTRELALQITKECKKFSKSLALRVVCVYGGTGISEQIAELKRGAEI 483
Query: 242 LVGTPGRILDL--SKKG-VCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
+V TPGR++D+ + G V L+ + +V+DEAD++ F+P V +++ + +RQ +M
Sbjct: 484 IVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEADRMFDMGFEPQVMRIVDNVRPDRQTVM 543
Query: 299 FSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQI 357
FSATFP T++ + L KP + + + + Q+ +EE +K L + Q
Sbjct: 544 FSATFPRTMEALARRILSKPVEVQVGGRSVVCSDVEQHVIVIEEEKKFLKLLEILGHYQE 603
Query: 358 NQS-IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
S IIF + + L K + + Y C +H + Q R+ + +DF+NGACR LV T +
Sbjct: 604 KGSVIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLLVATSV 663
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHR 444
RG+D++ + +V+N+ P + E Y+HR
Sbjct: 664 AARGLDVKQLILVVNYSCPNHYEDYVHR 691
Score = 41 (19.5 bits), Expect = 1.9e-49, Sum P(3) = 1.9e-49
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 70 GADSSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTED 113
G S+ D+ + ++ A V+P D + + K A+ R E+
Sbjct: 163 GKKWSLEDDDDDDEEAPAPVEPDGDDEEEQDKAAEAEESERMEE 206
Score = 38 (18.4 bits), Expect = 1.9e-49, Sum P(3) = 1.9e-49
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 111 TEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG 157
T+ VT K + K+ LM + E S +E + ALTG
Sbjct: 248 TKVVTVVKTKKMPHATKKKGELMENDQDAMEYSSEEEEVDLQTALTG 294
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 108/326 (33%), Positives = 179/326 (54%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F LK ELL + G+ +PIQ +S+P L G D++ + K G+GKTAAF + L K
Sbjct: 3 FSTLKLKTELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLNK 62
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDDIMRLYQPVH 240
+D IQ ++L PTRELA Q +Q + L + + N++V+ GG + I L H
Sbjct: 63 LDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGAH 122
Query: 241 LLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFS 300
++VGTPGRI+D + L + +MLV+DEAD++L FQP ++ +I P RQ L+FS
Sbjct: 123 IIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLFS 182
Query: 301 ATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQ-YYAFVEERQKVHCLNTLFSKLQINQ 359
ATFP ++ + + P ++ I Q +Y +++ ++ L L + +
Sbjct: 183 ATFPEQIQSIAKQIMYNPVMVKAAVTHEKNTIEQHFYQLDDDKSRMQALQLLLLEHKPES 242
Query: 360 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 419
+++FCN+ + +A ++ LG+S +H + Q R+ F N + LV TD+ R
Sbjct: 243 AVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATDVAAR 302
Query: 420 GIDIQAVNVVINFDFPKNSETYLHRV 445
G+DI A++ V N+ ++E ++HR+
Sbjct: 303 GLDIDALDAVFNYHVAYDTEVHIHRI 328
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 108/326 (33%), Positives = 179/326 (54%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F LK ELL + G+ +PIQ +S+P L G D++ + K G+GKTAAF + L K
Sbjct: 3 FSTLKLKTELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLNK 62
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDDIMRLYQPVH 240
+D IQ ++L PTRELA Q +Q + L + + N++V+ GG + I L H
Sbjct: 63 LDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGAH 122
Query: 241 LLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFS 300
++VGTPGRI+D + L + +MLV+DEAD++L FQP ++ +I P RQ L+FS
Sbjct: 123 IIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLFS 182
Query: 301 ATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQ-YYAFVEERQKVHCLNTLFSKLQINQ 359
ATFP ++ + + P ++ I Q +Y +++ ++ L L + +
Sbjct: 183 ATFPEQIQSIAKQIMYNPVMVKAAVTHEKNTIEQHFYQLDDDKSRMQALQLLLLEHKPES 242
Query: 360 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 419
+++FCN+ + +A ++ LG+S +H + Q R+ F N + LV TD+ R
Sbjct: 243 AVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATDVAAR 302
Query: 420 GIDIQAVNVVINFDFPKNSETYLHRV 445
G+DI A++ V N+ ++E ++HR+
Sbjct: 303 GLDIDALDAVFNYHVAYDTEVHIHRI 328
>UNIPROTKB|E2RR50 [details] [associations]
symbol:DDX19A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
EMBL:AAEX03004077 RefSeq:XP_536790.2 ProteinModelPortal:E2RR50
Ensembl:ENSCAFT00000032061 GeneID:479658 KEGG:cfa:479658
NextBio:20854805 Uniprot:E2RR50
Length = 478
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 122/337 (36%), Positives = 195/337 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK +LL G++ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 93 FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAML 152
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGK-HLNIQVMVTTGGTSLKDDIMRLYQP 238
+++ Q + L PT ELALQT +V +++GK H +++ G L+ ++ +
Sbjct: 153 SRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERG-QKISE- 210
Query: 239 VHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANRQI 296
H+++GTPG +LD SK K + V+DEAD +++ + Q ++ R LP N Q+
Sbjct: 211 -HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQM 269
Query: 297 LMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEER-QKVHCLNTLFSK 354
L+FSATF +V F K + P +I L +E TL I QYY R +K L L+
Sbjct: 270 LLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALCNLYGA 329
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
+ I Q++IFC++ LA ++++ G+ + +M+ + R V FR G + LV T
Sbjct: 330 ITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTT 389
Query: 415 DLFTRGIDIQAVNVVINFDFP------KNSETYLHRV 445
++ RGID++ V+VVINFD P ++ETYLHR+
Sbjct: 390 NVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRI 426
>UNIPROTKB|Q9KLE2 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 108/327 (33%), Positives = 177/327 (54%)
Query: 121 EFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 180
+F D L +L + E GF P+PIQ +IP+ L G D L +A+ GTGKTAAF +P L
Sbjct: 27 QFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLN 86
Query: 181 KIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPV 239
K++ Q +++ PTRELA+Q + K LG+++ ++V+ GG S+ D + L
Sbjct: 87 KLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGA 146
Query: 240 HLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMF 299
H++VGTPGR+ DL + L +C ++DEAD++L F V ++ P + Q ++F
Sbjct: 147 HIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLF 206
Query: 300 SATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQKVHCLNTLFSKLQIN 358
SAT P VK+ +++L+ P +++ T+ + Q Y V+ +K + L + +
Sbjct: 207 SATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEAMARLLETEETD 266
Query: 359 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 418
SI+F + E LA + G+ +H + Q R R + G LV TD+
Sbjct: 267 ASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVATDVVA 326
Query: 419 RGIDIQAVNVVINFDFPKNSETYLHRV 445
RG+D+ + V N+D P + E+Y+HR+
Sbjct: 327 RGLDVPRITHVYNYDIPFDVESYIHRI 353
>TIGR_CMR|VC_A0804 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 108/327 (33%), Positives = 177/327 (54%)
Query: 121 EFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 180
+F D L +L + E GF P+PIQ +IP+ L G D L +A+ GTGKTAAF +P L
Sbjct: 27 QFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLN 86
Query: 181 KIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPV 239
K++ Q +++ PTRELA+Q + K LG+++ ++V+ GG S+ D + L
Sbjct: 87 KLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGA 146
Query: 240 HLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMF 299
H++VGTPGR+ DL + L +C ++DEAD++L F V ++ P + Q ++F
Sbjct: 147 HIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLF 206
Query: 300 SATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQKVHCLNTLFSKLQIN 358
SAT P VK+ +++L+ P +++ T+ + Q Y V+ +K + L + +
Sbjct: 207 SATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEAMARLLETEETD 266
Query: 359 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 418
SI+F + E LA + G+ +H + Q R R + G LV TD+
Sbjct: 267 ASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVATDVVA 326
Query: 419 RGIDIQAVNVVINFDFPKNSETYLHRV 445
RG+D+ + V N+D P + E+Y+HR+
Sbjct: 327 RGLDVPRITHVYNYDIPFDVESYIHRI 353
>UNIPROTKB|F1S432 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:HETIFEV
EMBL:CU929739 Ensembl:ENSSSCT00000003016 Uniprot:F1S432
Length = 481
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 122/337 (36%), Positives = 196/337 (58%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK +LL G++ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 96 FEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAML 155
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGK-HLNIQVMVTTGGTSLKDDIMRLYQP 238
+++ N Q + L PT ELALQT +V +++GK + +++ G L+ ++ +
Sbjct: 156 SQVEPANRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG-QKISE- 213
Query: 239 VHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANRQI 296
H+++GTPG +LD SK K + V+DEAD +++ + Q ++ R LP N Q+
Sbjct: 214 -HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQM 272
Query: 297 LMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEER-QKVHCLNTLFSK 354
L+FSATF +V F K + P +I L +E TL I QYY R +K L L+
Sbjct: 273 LLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALCNLYGA 332
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
+ I Q++IFC++ LA ++++ G+ + +M+ + R V FR G + LV T
Sbjct: 333 ITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTT 392
Query: 415 DLFTRGIDIQAVNVVINFDFP------KNSETYLHRV 445
++ RGID++ V+VVINFD P ++ETYLHR+
Sbjct: 393 NVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRI 429
>UNIPROTKB|I3LC00 [details] [associations]
symbol:DDX19A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236
EMBL:CU929739 RefSeq:XP_003126917.1 Ensembl:ENSSSCT00000029799
GeneID:100524144 KEGG:ssc:100524144 Uniprot:I3LC00
Length = 478
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 122/337 (36%), Positives = 195/337 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK +LL G++ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 93 FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAML 152
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGK-HLNIQVMVTTGGTSLKDDIMRLYQP 238
+++ Q + L PT ELALQT +V +++GK H +++ G L+ ++ +
Sbjct: 153 SRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERG-QKISE- 210
Query: 239 VHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANRQI 296
H+++GTPG +LD SK K + V+DEAD +++ + Q ++ R LP N Q+
Sbjct: 211 -HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQM 269
Query: 297 LMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEER-QKVHCLNTLFSK 354
L+FSATF +V F K + P +I L +E TL I QYY R +K L L+
Sbjct: 270 LLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALCNLYGA 329
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
+ I Q++IFC++ LA ++++ G+ + +M+ + R V FR G + LV T
Sbjct: 330 ITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTT 389
Query: 415 DLFTRGIDIQAVNVVINFDFP------KNSETYLHRV 445
++ RGID++ V+VVINFD P ++ETYLHR+
Sbjct: 390 NVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRI 426
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 110/331 (33%), Positives = 181/331 (54%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F D+ L +L + E G+ P+PIQ E+IP L G D+ A+ GTGKTAAF +P +++
Sbjct: 6 FADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMIQR 65
Query: 182 IDQDN---NVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQP 238
+ + + +IL PTRELA Q ++ ++ GK+L + + + GG S K+ L +
Sbjct: 66 LSTGRARARMPRCLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKEQETLLQRG 125
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
V +L+ TPGR++D +G ++ L++DEAD++L F P +E++ LPANRQ L+
Sbjct: 126 VDVLIATPGRLMDQFDRGKLLMMGVETLIIDEADRMLDMGFIPDIEKICAKLPANRQTLL 185
Query: 299 FSATFPVTVKDFKDKYLQKPYVINLMDEL-TLKGITQYYAFV---EERQKVHCLNTLFSK 354
FSATFP ++ + + P I + T + I+Q+ + + + + L +
Sbjct: 186 FSATFPTDIQRLAKTFQKDPKKIEVTRPAQTAETISQFVVKLPTNDGKARRTALRRVIEA 245
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
+ I+FCN V+++A +T+ G+ IH + Q R+ FR+G + LV +
Sbjct: 246 TNVKNGIVFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQSVRSETLQRFRDGKLKLLVAS 305
Query: 415 DLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
D+ RG+DI V V NF P E Y+HR+
Sbjct: 306 DVAARGLDIPDVGHVFNFGPPPKDEDYVHRI 336
>UNIPROTKB|Q3ZBV2 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9913 "Bos taurus" [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005643
"nuclear pore" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K01529 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 EMBL:BC103093 IPI:IPI00788586
RefSeq:NP_001029743.1 UniGene:Bt.49612 HSSP:Q9UHL0
ProteinModelPortal:Q3ZBV2 SMR:Q3ZBV2 PRIDE:Q3ZBV2
Ensembl:ENSBTAT00000004645 GeneID:529929 KEGG:bta:529929 CTD:55308
HOVERGEN:HBG107989 InParanoid:Q3ZBV2 OMA:MMAINTI OrthoDB:EOG46MBJK
NextBio:20875139 ArrayExpress:Q3ZBV2 Uniprot:Q3ZBV2
Length = 478
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 121/337 (35%), Positives = 195/337 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK +LL G++ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 93 FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAML 152
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGK-HLNIQVMVTTGGTSLKDDIMRLYQP 238
+++ Q + L PT ELALQT +V +++GK H +++ G L+ ++ +
Sbjct: 153 SRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERG-QKISE- 210
Query: 239 VHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANRQI 296
H+++GTPG +LD SK K + V+DEAD +++ + Q ++ R LP N Q+
Sbjct: 211 -HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQM 269
Query: 297 LMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEER-QKVHCLNTLFSK 354
L+FSATF +V F K + P +I L +E TL I QYY R +K L ++
Sbjct: 270 LLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFQALCNIYGA 329
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
+ I Q++IFC++ LA ++++ G+ + +M+ + R V FR G + LV T
Sbjct: 330 ITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTT 389
Query: 415 DLFTRGIDIQAVNVVINFDFP------KNSETYLHRV 445
++ RGID++ V+VVINFD P ++ETYLHR+
Sbjct: 390 NVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRI 426
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 111/332 (33%), Positives = 183/332 (55%)
Query: 116 ATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFC 175
A F D + +L I + G+E P+ IQ +IP + GSD++ A+ GTGKTAAF
Sbjct: 9 AASAATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFA 68
Query: 176 IPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMR 234
IP L KID + V Q ++LVPTRELALQ ++ G +L+ + V+ GG+S +
Sbjct: 69 IPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAG 128
Query: 235 LYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANR 294
L + ++VGTPGR++D ++ L LV+DEAD++L+ F VE+++ P +
Sbjct: 129 LRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYK 188
Query: 295 QILMFSATFPVTVKDFKDKYLQKPYVINLMDELTL-KGITQYYAFVEERQKVHCLNTLFS 353
Q+ +FSAT P ++ KYL P+ + + + + I+Q Y ++ +K+ L +
Sbjct: 189 QVALFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSY--IQVARKMDALTRVLE 246
Query: 354 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 413
I+F + E +A+K+ G+S I + Q R R R+G LV
Sbjct: 247 VEPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVA 306
Query: 414 TDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
TD+ RG+D++ ++ V+N+D P ++E+Y+HR+
Sbjct: 307 TDVAARGLDVERISHVLNYDIPHDTESYVHRI 338
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 112/328 (34%), Positives = 184/328 (56%)
Query: 121 EFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 180
+F+ L LL I E G+++ + +Q++ IP+AL G DI+A A+ GTGKTAAF +P LE
Sbjct: 2 KFDTLGLSSPLLNAITECGYQQLTQVQQQVIPLALVGKDIMACAQTGTGKTAAFALPVLE 61
Query: 181 KI---DQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQ 237
++ D +++ +++ PTRELA+Q ++ + L ++ + GG ++ + Q
Sbjct: 62 QLAAKPADKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQ 121
Query: 238 PVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQIL 297
V +LV TPGR+ D+ + L + LV+DEAD++L F +E++ R + Q +
Sbjct: 122 GVDILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIAPVHQTM 181
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQI 357
+FSAT+ VK K L +P +N+ + T + Q V++R+K L+ L +
Sbjct: 182 LFSATYSDAVKQLSHKMLNQPQWVNVAENTTASTVEQLVYRVDKRRKAELLSELVGRNNW 241
Query: 358 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 417
Q ++F ++ E L +++T G S H Q RNRV DF+ G R LV TD+
Sbjct: 242 RQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLVATDVA 301
Query: 418 TRGIDIQAVNVVINFDFPKNSETYLHRV 445
RG+DIQA+ +VIN + P +E Y+HR+
Sbjct: 302 ARGLDIQALPLVINLELPFLAEDYVHRI 329
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 112/328 (34%), Positives = 184/328 (56%)
Query: 121 EFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 180
+F+ L LL I E G+++ + +Q++ IP+AL G DI+A A+ GTGKTAAF +P LE
Sbjct: 2 KFDTLGLSSPLLNAITECGYQQLTQVQQQVIPLALVGKDIMACAQTGTGKTAAFALPVLE 61
Query: 181 KI---DQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQ 237
++ D +++ +++ PTRELA+Q ++ + L ++ + GG ++ + Q
Sbjct: 62 QLAAKPADKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQ 121
Query: 238 PVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQIL 297
V +LV TPGR+ D+ + L + LV+DEAD++L F +E++ R + Q +
Sbjct: 122 GVDILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIAPVHQTM 181
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQI 357
+FSAT+ VK K L +P +N+ + T + Q V++R+K L+ L +
Sbjct: 182 LFSATYSDAVKQLSHKMLNQPQWVNVAENTTASTVEQLVYRVDKRRKAELLSELVGRNNW 241
Query: 358 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 417
Q ++F ++ E L +++T G S H Q RNRV DF+ G R LV TD+
Sbjct: 242 RQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLVATDVA 301
Query: 418 TRGIDIQAVNVVINFDFPKNSETYLHRV 445
RG+DIQA+ +VIN + P +E Y+HR+
Sbjct: 302 ARGLDIQALPLVINLELPFLAEDYVHRI 329
>UNIPROTKB|F1MUT6 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 EMBL:DAAA02045970
IPI:IPI00704706 UniGene:Bt.37736 Ensembl:ENSBTAT00000004644
OMA:KMSMNIL Uniprot:F1MUT6
Length = 484
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 121/337 (35%), Positives = 196/337 (58%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK +LL G++ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 99 FEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAML 158
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGK-HLNIQVMVTTGGTSLKDDIMRLYQP 238
+++ N Q + L PT ELALQT +V +++GK + +++ G L+ ++ +
Sbjct: 159 SQVEPANRHPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG-QKISE- 216
Query: 239 VHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANRQI 296
H+++GTPG +LD SK K + V+DEAD +++ + Q ++ R LP N Q+
Sbjct: 217 -HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQM 275
Query: 297 LMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEER-QKVHCLNTLFSK 354
L+FSATF +V F K + P +I L +E TL I QYY R +K L ++
Sbjct: 276 LLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFQALCNIYGA 335
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
+ I Q++IFC++ LA ++++ G+ + +M+ + R V FR G + LV T
Sbjct: 336 ITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTT 395
Query: 415 DLFTRGIDIQAVNVVINFDFP------KNSETYLHRV 445
++ RGID++ V+VVINFD P ++ETYLHR+
Sbjct: 396 NVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRI 432
>UNIPROTKB|F1PIZ6 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
EMBL:AAEX03003382 Ensembl:ENSCAFT00000016722 Uniprot:F1PIZ6
Length = 462
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 121/339 (35%), Positives = 193/339 (56%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK ELL GI+ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 78 FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAML 137
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKH-LNIQVMVTTGGTSLK--DDIMRLY 236
+++ Q + L PT ELALQT +V + +GK +++QVM G + D+ +
Sbjct: 138 SRVNTLELFPQCLCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNHIPRGTDVTK-- 195
Query: 237 QPVHLLVGTPGRILDLS-KKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANR 294
+++GTPG +LD K+ + L + V+DEAD ++ + F ++ R LP+
Sbjct: 196 ---QIIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSEC 252
Query: 295 QILMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ-KVHCLNTLF 352
Q+L+FSATF +V F ++ + P VI L +ELTL I QYY E R+ K L ++
Sbjct: 253 QMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLSNIRQYYVLCENRKDKYQALCNIY 312
Query: 353 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 412
+ I Q+IIFC + + L ++ + G+ + ++ D R + FR+G + L+
Sbjct: 313 GGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLI 372
Query: 413 CTDLFTRGIDIQAVNVVINFDFPKNS------ETYLHRV 445
T++ RGID++ V +V+NFD P N ETYLHR+
Sbjct: 373 TTNVSRRGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRI 411
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 110/326 (33%), Positives = 180/326 (55%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F LK +L + G+ +PIQ S+P+ L G D++ARAK G+GKTAAF I L +
Sbjct: 6 FSSLRLKAPMLRNLASLGYAEMTPIQAHSLPLILAGKDVIARAKTGSGKTAAFGIGLLSR 65
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDDIMRLYQPVH 240
+D + +Q ++L PTRELA Q + + L + NI+++ GG + L H
Sbjct: 66 LDALSFRVQALVLCPTRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLGSLEHGAH 125
Query: 241 LLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFS 300
+++GTPGR+LD ++G L LV+DEAD++L FQ + LI P RQ L+FS
Sbjct: 126 VVIGTPGRLLDHLRRGSLDLSALRTLVLDEADRMLDMGFQDDISALIAAAPPKRQTLLFS 185
Query: 301 ATFPVTVKDFKDKYLQKPYVINLMDELTLKG-ITQYYAFVEERQKVHCLNTLFSKLQINQ 359
AT+P ++ ++P +++ DE+ +G I Q + V+ Q++ + + +
Sbjct: 186 ATYPDSIAAMSAGVQREPVEVSV-DEVHGEGAIEQVFYEVDSGQRIEAVERILGHYRPES 244
Query: 360 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 419
++IFCN+ + +A + GY+ IH + Q R+RV F N + LV TD+ R
Sbjct: 245 ALIFCNTKLECQEVANALAVRGYAALAIHGDLDQRERDRVLVRFANRSASVLVATDVAAR 304
Query: 420 GIDIQAVNVVINFDFPKNSETYLHRV 445
G+DI+ ++ VIN++ +N E + HR+
Sbjct: 305 GLDIKELSAVINYELTRNPEVHTHRI 330
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 112/324 (34%), Positives = 174/324 (53%)
Query: 127 LKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDN 186
L L + E+G++ PSPIQ ++IP LTG D++A A+ GTGKTA F +P LE + + +
Sbjct: 8 LSAPLQKAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLELLAKGH 67
Query: 187 NV----IQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLL 242
+ ++L PTRELA Q + + GK+L ++ V GG + I +L V +L
Sbjct: 68 KAKSGQTRALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPINPQINKLRHGVDVL 127
Query: 243 VGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSAT 302
V TPGR+LDL ++ +LV+DEAD++L F +++++ LPA RQ LMFSAT
Sbjct: 128 VATPGRLLDLVQQNAVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQNLMFSAT 187
Query: 303 FPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSI 361
F +++ + P I++ + Q+ V++ QK L L + Q +
Sbjct: 188 FSDEIRELAKGLVNHPVEISVTPRNAAATTVKQWICPVDKTQKSALLIQLIKQENWQQVL 247
Query: 362 IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI 421
+F + + LAK + + S IH Q R + DF++G R LV TD+ RG+
Sbjct: 248 VFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVATDIAARGL 307
Query: 422 DIQAVNVVINFDFPKNSETYLHRV 445
DI + V+NFD P E Y+HR+
Sbjct: 308 DIDQLPQVVNFDLPNVPEDYVHRI 331
>UNIPROTKB|H3BQK0 [details] [associations]
symbol:DDX19B "HCG1998531, isoform CRA_g" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:CH471241 EMBL:AC012184 HGNC:HGNC:2742
ChiTaRS:DDX19B SMR:H3BQK0 Ensembl:ENST00000563206 Uniprot:H3BQK0
Length = 484
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 122/337 (36%), Positives = 195/337 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK +LL G++ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 99 FEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAML 158
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGK-HLNIQVMVTTGGTSLKDDIMRLYQP 238
+++ N Q + L PT ELALQT +V +++GK + +++ G L+ ++ +
Sbjct: 159 SQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG-QKISEQ 217
Query: 239 VHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANRQI 296
+ ++GTPG +LD SK K + V+DEAD +++ + Q ++ R LP N Q+
Sbjct: 218 I--VIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQM 275
Query: 297 LMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEER-QKVHCLNTLFSK 354
L+FSATF +V F K + P VI L +E TL I QYY R +K L L+
Sbjct: 276 LLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGA 335
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
+ I Q++IFC++ LA ++++ G+ + +M+ + R V FR G + LV T
Sbjct: 336 ITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTT 395
Query: 415 DLFTRGIDIQAVNVVINFDFP------KNSETYLHRV 445
++ RGID++ V+VVINFD P ++ETYLHR+
Sbjct: 396 NVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRI 432
>UNIPROTKB|Q9UMR2 [details] [associations]
symbol:DDX19B "ATP-dependent RNA helicase DDX19B"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0006406 "mRNA export from nucleus" evidence=TAS]
[GO:0005635 "nuclear envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0003723 GO:GO:0004386
GO:GO:0006406 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
OrthoDB:EOG46MBJK EMBL:CH471241 EMBL:AJ237946 EMBL:AF353720
EMBL:AL136639 EMBL:CR457215 EMBL:CR533509 EMBL:AK027378
EMBL:AK301938 EMBL:AK302107 EMBL:AK316346 EMBL:AC012184
EMBL:BC003626 EMBL:BC010008 IPI:IPI00008943 IPI:IPI00027599
IPI:IPI00556368 IPI:IPI00939593 RefSeq:NP_001014449.1
RefSeq:NP_001014451.1 RefSeq:NP_001244101.1 RefSeq:NP_001244102.1
RefSeq:NP_001244103.1 RefSeq:NP_009173.1 UniGene:Hs.221761 PDB:3EWS
PDB:3FHC PDB:3FHT PDB:3FMO PDB:3FMP PDB:3G0H PDBsum:3EWS
PDBsum:3FHC PDBsum:3FHT PDBsum:3FMO PDBsum:3FMP PDBsum:3G0H
ProteinModelPortal:Q9UMR2 SMR:Q9UMR2 DIP:DIP-48486N IntAct:Q9UMR2
MINT:MINT-1387516 STRING:Q9UMR2 PhosphoSite:Q9UMR2 DMDM:10719979
PaxDb:Q9UMR2 PRIDE:Q9UMR2 DNASU:11269 Ensembl:ENST00000288071
Ensembl:ENST00000355992 Ensembl:ENST00000393657
Ensembl:ENST00000451014 Ensembl:ENST00000563392
Ensembl:ENST00000568625 GeneID:11269 KEGG:hsa:11269 UCSC:uc002eyo.3
UCSC:uc002eyp.3 CTD:11269 GeneCards:GC16P070328 HGNC:HGNC:2742
HPA:CAB037284 MIM:605812 neXtProt:NX_Q9UMR2 PharmGKB:PA27208
InParanoid:Q9UMR2 OMA:HETIFEV PhylomeDB:Q9UMR2 ChiTaRS:DDX19B
EvolutionaryTrace:Q9UMR2 GenomeRNAi:11269 NextBio:42879
ArrayExpress:Q9UMR2 Bgee:Q9UMR2 CleanEx:HS_DDX19B
Genevestigator:Q9UMR2 GermOnline:ENSG00000157349 Uniprot:Q9UMR2
Length = 479
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 122/337 (36%), Positives = 195/337 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK +LL G++ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 94 FEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAML 153
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGK-HLNIQVMVTTGGTSLKDDIMRLYQP 238
+++ N Q + L PT ELALQT +V +++GK + +++ G L+ ++ +
Sbjct: 154 SQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG-QKISEQ 212
Query: 239 VHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANRQI 296
+ ++GTPG +LD SK K + V+DEAD +++ + Q ++ R LP N Q+
Sbjct: 213 I--VIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQM 270
Query: 297 LMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEER-QKVHCLNTLFSK 354
L+FSATF +V F K + P VI L +E TL I QYY R +K L L+
Sbjct: 271 LLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGA 330
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
+ I Q++IFC++ LA ++++ G+ + +M+ + R V FR G + LV T
Sbjct: 331 ITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTT 390
Query: 415 DLFTRGIDIQAVNVVINFDFP------KNSETYLHRV 445
++ RGID++ V+VVINFD P ++ETYLHR+
Sbjct: 391 NVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRI 427
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 106/333 (31%), Positives = 187/333 (56%)
Query: 115 TATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAF 174
T T F LK++L+ + G+E+ +PIQ +++P L G D++ AK G+GKTAAF
Sbjct: 5 TTTSSLAFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKTAAF 64
Query: 175 CIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDDIM 233
+ L K++ IQ +++ PTRELA Q ++ ++L + + NI+++ GGT I
Sbjct: 65 GLALLNKLEVKKFRIQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQIG 124
Query: 234 RLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPAN 293
L H++VGTPGR+ + KG L + ++LV+DEAD++L FQ +++ ++ P +
Sbjct: 125 SLEHGAHVIVGTPGRLEEHVIKGTLQLDNLNLLVLDEADRMLEMGFQAALDNIVGRTPLD 184
Query: 294 RQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQ-YYAFVEERQKVHCLNTLF 352
RQ L+FSATFP +K + + P ++ + I+Q ++ + ++ L L
Sbjct: 185 RQTLLFSATFPDQIKSISESIMTDPVMVKIASSEDQSTISQKFFKVGNDDDRLDALRLLL 244
Query: 353 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 412
Q+ + IFCN+ + +A + G+S +H + Q R++ F N + LV
Sbjct: 245 LGNQVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSASILV 304
Query: 413 CTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
TD+ RG+DI ++++VIN+ ++SE ++HR+
Sbjct: 305 ATDVAARGLDIDSLDLVINYHIARDSEVHVHRI 337
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 106/333 (31%), Positives = 187/333 (56%)
Query: 115 TATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAF 174
T T F LK++L+ + G+E+ +PIQ +++P L G D++ AK G+GKTAAF
Sbjct: 5 TTTSSLAFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKTAAF 64
Query: 175 CIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDDIM 233
+ L K++ IQ +++ PTRELA Q ++ ++L + + NI+++ GGT I
Sbjct: 65 GLALLNKLEVKKFRIQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQIG 124
Query: 234 RLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPAN 293
L H++VGTPGR+ + KG L + ++LV+DEAD++L FQ +++ ++ P +
Sbjct: 125 SLEHGAHVIVGTPGRLEEHVIKGTLQLDNLNLLVLDEADRMLEMGFQAALDNIVGRTPLD 184
Query: 294 RQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQ-YYAFVEERQKVHCLNTLF 352
RQ L+FSATFP +K + + P ++ + I+Q ++ + ++ L L
Sbjct: 185 RQTLLFSATFPDQIKSISESIMTDPVMVKIASSEDQSTISQKFFKVGNDDDRLDALRLLL 244
Query: 353 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 412
Q+ + IFCN+ + +A + G+S +H + Q R++ F N + LV
Sbjct: 245 LGNQVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSASILV 304
Query: 413 CTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
TD+ RG+DI ++++VIN+ ++SE ++HR+
Sbjct: 305 ATDVAARGLDIDSLDLVINYHIARDSEVHVHRI 337
>MGI|MGI:99526 [details] [associations]
symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:99526
GO:GO:0005524 GO:GO:0005737 GO:GO:0015031 GO:GO:0031965
GO:GO:0005643 GO:GO:0003723 EMBL:CH466525 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:L25125 EMBL:AK049467
EMBL:AK146548 EMBL:BC011270 IPI:IPI00123651 PIR:I49731
RefSeq:NP_031942.2 UniGene:Mm.287901 ProteinModelPortal:Q61655
SMR:Q61655 IntAct:Q61655 PhosphoSite:Q61655
REPRODUCTION-2DPAGE:Q61655 PaxDb:Q61655 PRIDE:Q61655
Ensembl:ENSMUST00000040416 GeneID:13680 KEGG:mmu:13680
InParanoid:Q543M2 ChiTaRS:DDX19A NextBio:284434 Bgee:Q61655
CleanEx:MM_DDX19A Genevestigator:Q61655
GermOnline:ENSMUSG00000015023 Uniprot:Q61655
Length = 478
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 121/337 (35%), Positives = 195/337 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK +LL G++ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 93 FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAML 152
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGK-HLNIQVMVTTGGTSLKDDIMRLYQP 238
+++ + Q + L PT ELALQT +V +++GK H +++ G L+ ++ +
Sbjct: 153 SRVEPADRYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERG-QKVSEQ 211
Query: 239 VHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANRQI 296
+ ++GTPG +LD SK K + V+DEAD +++ + Q ++ R LP N Q+
Sbjct: 212 I--VIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQM 269
Query: 297 LMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ-KVHCLNTLFSK 354
L+FSATF +V F K + P +I L +E TL I QYY R+ K L L+
Sbjct: 270 LLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLYGA 329
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
+ I Q++IFC++ LA ++++ G+ + +M+ + R V FR G + LV T
Sbjct: 330 ITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTT 389
Query: 415 DLFTRGIDIQAVNVVINFDFP------KNSETYLHRV 445
++ RGID++ V+VVINFD P ++ETYLHR+
Sbjct: 390 NVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRI 426
>UNIPROTKB|Q5ZMC1 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K01529 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA
GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:11269
EMBL:AADN02040672 UniGene:Gga.7753 EMBL:AJ719463 IPI:IPI00571485
RefSeq:NP_001006568.1 SMR:Q5ZMC1 Ensembl:ENSGALT00000039619
GeneID:426504 KEGG:gga:426504 InParanoid:Q5ZMC1 NextBio:20828056
Uniprot:Q5ZMC1
Length = 479
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 131/396 (33%), Positives = 217/396 (54%)
Query: 70 GADSSIVDEVEKTVQSEAAVDPSSQDWKARL-KIPPADTRYRTEDVTATKGN------EF 122
GA D VE+T + E D ++Q +L + DT + E + + F
Sbjct: 36 GAVPKADDNVERT-EDEEKEDRAAQSLLNKLIRSNLVDTTNQVEVLQRDPNSPLYSVKSF 94
Query: 123 EDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPALE 180
E+ LK +LL G++ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 95 EELHLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLS 154
Query: 181 KIDQDNNVIQVVILVPTRELALQTSQVCKELGK-HLNIQVMVTTGGTSLKDDIMRLYQPV 239
+++ N Q + L PT ELALQT +V +++GK + +++ G L+ ++ + +
Sbjct: 155 RVEPGNKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG-QKISEQI 213
Query: 240 HLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANRQIL 297
++GTPG +LD SK K + V+DEAD +++ + Q ++ R LP + Q+L
Sbjct: 214 --VIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRDCQML 271
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEER-QKVHCLNTLFSKL 355
+FSATF +V F K + P +I L +E TL I QYY R +K L ++ +
Sbjct: 272 LFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFRALCNIYGAI 331
Query: 356 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 415
I Q+++FC++ LA ++++ G+ + +M+ + R V FR G + LV T+
Sbjct: 332 TIAQAMVFCHTRKTAGWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTN 391
Query: 416 LFTRGIDIQAVNVVINFDFP------KNSETYLHRV 445
+ RGID++ V+VVINFD P ++ETYLHR+
Sbjct: 392 VCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRI 427
>UNIPROTKB|Q2TBP1 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9913 "Bos taurus" [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0033391
"chromatoid body" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0007286 "spermatid
development" evidence=ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q9UHL0
HOVERGEN:HBG107989 EMBL:BC109867 IPI:IPI00724449
RefSeq:NP_001033606.1 UniGene:Bt.14611 ProteinModelPortal:Q2TBP1
SMR:Q2TBP1 PRIDE:Q2TBP1 GeneID:508962 KEGG:bta:508962 CTD:29118
InParanoid:Q2TBP1 OrthoDB:EOG4NS3BD NextBio:20868762 Uniprot:Q2TBP1
Length = 483
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 120/339 (35%), Positives = 193/339 (56%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK ELL GI+ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 99 FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAML 158
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKH-LNIQVMVTTGGTSLK--DDIMRLY 236
+++ Q + L PT ELALQT +V + +GK +++QVM G + D+ +
Sbjct: 159 SRVNALKLFPQCLCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNRIPRGTDVTK-- 216
Query: 237 QPVHLLVGTPGRILDLS-KKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANR 294
+++GTPG +LD K+ + L + V+DEAD ++ + F+ ++ R LP+
Sbjct: 217 ---QIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFEDQSIRIQRALPSEC 273
Query: 295 QILMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ-KVHCLNTLF 352
Q+L+FSATF +V F ++ + P VI L +ELTL I QYY R+ K L ++
Sbjct: 274 QMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIY 333
Query: 353 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 412
+ I Q+IIFC + + L ++ + G+ + ++ D R + FR+G + L+
Sbjct: 334 GGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLI 393
Query: 413 CTDLFTRGIDIQAVNVVINFDFPKNS------ETYLHRV 445
T++ RGID++ V +V+NFD P N ETYLHR+
Sbjct: 394 TTNVCARGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRI 432
>UNIPROTKB|Q9NUU7 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0003723 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:AK001988 EMBL:AK223262
EMBL:AL832970 EMBL:CH471241 EMBL:BC005162 EMBL:BC006544
EMBL:BC137496 EMBL:BC137497 IPI:IPI00019918 RefSeq:NP_060802.1
UniGene:Hs.656037 ProteinModelPortal:Q9NUU7 SMR:Q9NUU7
IntAct:Q9NUU7 MINT:MINT-1450935 STRING:Q9NUU7 PhosphoSite:Q9NUU7
DMDM:73919226 PaxDb:Q9NUU7 PeptideAtlas:Q9NUU7 PRIDE:Q9NUU7
DNASU:55308 Ensembl:ENST00000302243 GeneID:55308 KEGG:hsa:55308
UCSC:uc002eyv.3 GeneCards:GC16P070380 H-InvDB:HIX0038837
HGNC:HGNC:25628 HPA:HPA045252 neXtProt:NX_Q9NUU7
PharmGKB:PA134894996 InParanoid:Q9NUU7 PhylomeDB:Q9NUU7
GenomeRNAi:55308 NextBio:59538 ArrayExpress:Q9NUU7 Bgee:Q9NUU7
CleanEx:HS_DDX19A Genevestigator:Q9NUU7 GermOnline:ENSG00000168872
Uniprot:Q9NUU7
Length = 478
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 121/337 (35%), Positives = 195/337 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK +LL G++ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 93 FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAML 152
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGK-HLNIQVMVTTGGTSLKDDIMRLYQP 238
+++ + Q + L PT ELALQT +V +++GK + +++ G L+ ++ +
Sbjct: 153 SRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG-QKISEQ 211
Query: 239 VHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANRQI 296
+ ++GTPG +LD SK K + V+DEAD +++ + Q ++ R LP N Q+
Sbjct: 212 I--VIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQM 269
Query: 297 LMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEER-QKVHCLNTLFSK 354
L+FSATF +V F K + P VI L +E TL I QYY R +K L L+
Sbjct: 270 LLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGA 329
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
+ I Q++IFC++ LA ++++ G+ + +M+ + R V FR G + LV T
Sbjct: 330 ITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTT 389
Query: 415 DLFTRGIDIQAVNVVINFDFP------KNSETYLHRV 445
++ RGID++ V+VVINFD P ++ETYLHR+
Sbjct: 390 NVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRI 426
>UNIPROTKB|E9PTL9 [details] [associations]
symbol:Ddx19b "Protein Ddx19b" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1593382 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00959699
Ensembl:ENSRNOT00000059034 ArrayExpress:E9PTL9 Uniprot:E9PTL9
Length = 482
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 121/337 (35%), Positives = 195/337 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK +LL G++ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 97 FEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAML 156
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGK-HLNIQVMVTTGGTSLKDDIMRLYQP 238
+++ + Q + L PT ELALQT +V +++GK H +++ G L+ ++ +
Sbjct: 157 SRVEPADRHPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERG-QKVGEQ 215
Query: 239 VHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANRQI 296
+ ++GTPG +LD SK K + V+DEAD +++ + Q ++ R LP N Q+
Sbjct: 216 I--VIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQM 273
Query: 297 LMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ-KVHCLNTLFSK 354
L+FSATF +V F K + P +I L +E TL I QYY R+ K L L+
Sbjct: 274 LLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLYGA 333
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
+ I Q++IFC++ LA ++++ G+ + +M+ + R V FR G + LV T
Sbjct: 334 ITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTT 393
Query: 415 DLFTRGIDIQAVNVVINFDFP------KNSETYLHRV 445
++ RGID++ V+VVINFD P ++ETYLHR+
Sbjct: 394 NVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRI 430
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 108/328 (32%), Positives = 178/328 (54%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F + L LL I E ++ P+ IQ++SIP+ L D++ARA+ GTGKTAAF +P L++
Sbjct: 7 FSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQQ 66
Query: 182 ---IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQP 238
+ ++ ++L PTRELA Q + G+ ++ + + GG S K I L
Sbjct: 67 LISVQPCKPELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELKVG 126
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
V +L+ TPGR+LDL + L + LV DEAD++L F+ ++Q+ ++LP +Q L+
Sbjct: 127 VDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQTLL 186
Query: 299 FSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQI 357
FSATF + L +P ++ + ++ + Q V+ +K + L
Sbjct: 187 FSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGVDADRKRELTSFLIGSRNW 246
Query: 358 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 417
Q ++F + + LAK++T+ G IH Q R + H+F+ G R L+ TD+
Sbjct: 247 KQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVA 306
Query: 418 TRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGIDI+ ++ VIN++ P N+E Y+HR+
Sbjct: 307 ARGIDIKGLSHVINYELPYNAEDYVHRI 334
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 108/328 (32%), Positives = 178/328 (54%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F + L LL I E ++ P+ IQ++SIP+ L D++ARA+ GTGKTAAF +P L++
Sbjct: 7 FSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQQ 66
Query: 182 ---IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQP 238
+ ++ ++L PTRELA Q + G+ ++ + + GG S K I L
Sbjct: 67 LISVQPCKPELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELKVG 126
Query: 239 VHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
V +L+ TPGR+LDL + L + LV DEAD++L F+ ++Q+ ++LP +Q L+
Sbjct: 127 VDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQTLL 186
Query: 299 FSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQI 357
FSATF + L +P ++ + ++ + Q V+ +K + L
Sbjct: 187 FSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGVDADRKRELTSFLIGSRNW 246
Query: 358 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 417
Q ++F + + LAK++T+ G IH Q R + H+F+ G R L+ TD+
Sbjct: 247 KQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVA 306
Query: 418 TRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGIDI+ ++ VIN++ P N+E Y+HR+
Sbjct: 307 ARGIDIKGLSHVINYELPYNAEDYVHRI 334
>POMBASE|SPBC12C2.06 [details] [associations]
symbol:SPBC12C2.06 "cytoplasmic ATP-dependent RNA
helicase Dbp5 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0002184 "cytoplasmic translational termination" evidence=NAS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006415 "translational
termination" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC12C2.06 GO:GO:0005829 GO:GO:0005524
GO:GO:0005635 GO:GO:0015031 EMBL:CU329671 GO:GO:0031965
GO:GO:0005643 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0006406
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
PIR:T39375 RefSeq:NP_596016.1 PDB:3FHO PDBsum:3FHO
ProteinModelPortal:Q09747 STRING:Q09747 PRIDE:Q09747
EnsemblFungi:SPBC12C2.06.1 GeneID:2539975 KEGG:spo:SPBC12C2.06
EvolutionaryTrace:Q09747 NextBio:20801118 GO:GO:0002184
Uniprot:Q09747
Length = 503
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 126/388 (32%), Positives = 211/388 (54%)
Query: 77 DEVEKTVQSEAAVDPSSQDWKARLKIPPA-DTRYRTEDVTATKGN------EFEDYFLKR 129
D+ T+ +A S D ++ L IP + R + D+ A + FE+ LK
Sbjct: 66 DKATNTIAEDANTKQSEND-ESNL-IPNKNEVRVKLADLQADPNSPLFSVKSFEELELKP 123
Query: 130 ELLMGIFEKGFERPSPIQEESIPIALTGS--DILARAKNGTGKTAAFCIPALEKIDQDNN 187
ELL GI+ F++PS IQE+++P+ L+ +++ ++++GTGKTAAF + L ++D
Sbjct: 124 ELLKGIYSMKFQKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFALTMLSRVDASVP 183
Query: 188 VIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQ-PVHLLVGTP 246
Q + L P+RELA Q V E+GK+ ++ T G +KD + + + +++GTP
Sbjct: 184 KPQAICLAPSRELARQIMDVVTEMGKYTEVK---TAFG--IKDSVPKGAKIDAQIVIGTP 238
Query: 247 GRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIR-FLPANRQILMFSATFPV 305
G ++DL K+ +D + V+DEAD +L + I+ LP N QI++FSATF
Sbjct: 239 GTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGDQSMRIKHLLPRNTQIVLFSATFSE 298
Query: 306 TVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIF 363
V+ + +++ I L +EL+++GI Q Y + E K + L L+ L I QSIIF
Sbjct: 299 RVEKYAERFAPNANEIRLKTEELSVEGIKQLYMDCQSEEHKYNVLVELYGLLTIGQSIIF 358
Query: 364 CNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDI 423
C + E +A+++T G++ + + R+ + FR G + LV T++ RGID+
Sbjct: 359 CKKKDTAEEIARRMTADGHTVACLTGNLEGAQRDAIMDSFRVGTSKVLVTTNVIARGIDV 418
Query: 424 QAVNVVINFDFPKNS------ETYLHRV 445
VN+V+N+D P + +TYLHR+
Sbjct: 419 SQVNLVVNYDMPLDQAGRPDPQTYLHRI 446
>RGD|1303136 [details] [associations]
symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEP] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1303136 RGD:1593382 GO:GO:0005524 GO:GO:0006917
GO:GO:0010043 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
CTD:55308 HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:BC079094
IPI:IPI00476885 RefSeq:NP_001005381.2 UniGene:Rn.228949 SMR:Q68FX3
Ensembl:ENSRNOT00000024793 GeneID:292022 KEGG:rno:292022
UCSC:RGD:1303136 NextBio:633623 Genevestigator:Q68FX3
Uniprot:Q68FX3
Length = 478
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 121/337 (35%), Positives = 195/337 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK +LL G++ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 93 FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAML 152
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGK-HLNIQVMVTTGGTSLKDDIMRLYQP 238
+++ + Q + L PT ELALQT +V +++GK H +++ G L+ ++ +
Sbjct: 153 SRVEPADRHPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERG-QKVGEQ 211
Query: 239 VHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANRQI 296
+ ++GTPG +LD SK K + V+DEAD +++ + Q ++ R LP N Q+
Sbjct: 212 I--VIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQM 269
Query: 297 LMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ-KVHCLNTLFSK 354
L+FSATF +V F K + P +I L +E TL I QYY R+ K L L+
Sbjct: 270 LLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLYGA 329
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
+ I Q++IFC++ LA ++++ G+ + +M+ + R V FR G + LV T
Sbjct: 330 ITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTT 389
Query: 415 DLFTRGIDIQAVNVVINFDFP------KNSETYLHRV 445
++ RGID++ V+VVINFD P ++ETYLHR+
Sbjct: 390 NVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRI 426
>RGD|1593382 [details] [associations]
symbol:Ddx19b "DEAD (Asp-Glu-Ala-As) box polypeptide 19B"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1303136 RGD:1593382 GO:GO:0005524
GO:GO:0006917 GO:GO:0010043 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
CTD:55308 HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:BC079094
IPI:IPI00476885 RefSeq:NP_001005381.2 UniGene:Rn.228949 SMR:Q68FX3
Ensembl:ENSRNOT00000024793 GeneID:292022 KEGG:rno:292022
UCSC:RGD:1303136 NextBio:633623 Genevestigator:Q68FX3
Uniprot:Q68FX3
Length = 478
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 121/337 (35%), Positives = 195/337 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK +LL G++ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 93 FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAML 152
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGK-HLNIQVMVTTGGTSLKDDIMRLYQP 238
+++ + Q + L PT ELALQT +V +++GK H +++ G L+ ++ +
Sbjct: 153 SRVEPADRHPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERG-QKVGEQ 211
Query: 239 VHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANRQI 296
+ ++GTPG +LD SK K + V+DEAD +++ + Q ++ R LP N Q+
Sbjct: 212 I--VIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQM 269
Query: 297 LMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ-KVHCLNTLFSK 354
L+FSATF +V F K + P +I L +E TL I QYY R+ K L L+
Sbjct: 270 LLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLYGA 329
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
+ I Q++IFC++ LA ++++ G+ + +M+ + R V FR G + LV T
Sbjct: 330 ITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTT 389
Query: 415 DLFTRGIDIQAVNVVINFDFP------KNSETYLHRV 445
++ RGID++ V+VVINFD P ++ETYLHR+
Sbjct: 390 NVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRI 426
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 382 (139.5 bits), Expect = 5.4e-48, Sum P(3) = 5.4e-48
Identities = 88/261 (33%), Positives = 139/261 (53%)
Query: 192 VILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 251
++L PTRELALQ ++ ++ V GG + I L + HLLV TPGR++D
Sbjct: 318 LVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVD 377
Query: 252 LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIR--FLP--ANRQILMFSATFPVTV 307
+ ++G L C LV+DEAD++L F+P + +++ +P +RQ +MFSATFP +
Sbjct: 378 MMERGKIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGSRQTMMFSATFPKEI 437
Query: 308 KDFKDKYLQKPYVINLMDEL--TLKGITQYYAFVEERQKVHCLNTLFSKL-QINQSIIFC 364
+ +L++ Y+ + + T + ITQ +VEE K L L + + + +++F
Sbjct: 438 QILARDFLEE-YIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATGKDSLTLVFV 496
Query: 365 NSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQ 424
+ + L + GY+C IH Q R H FR+G C +V T + RG+DI
Sbjct: 497 ETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPIMVATAVAARGLDIS 556
Query: 425 AVNVVINFDFPKNSETYLHRV 445
V VINFD P + E Y+HR+
Sbjct: 557 NVKHVINFDLPSDIEEYVHRI 577
Score = 122 (48.0 bits), Expect = 5.4e-48, Sum P(3) = 5.4e-48
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 130 ELLMG-IFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI 182
E++MG I + RP+P+Q+ +IPI T D++A A+ G+GKTAAF +P L +I
Sbjct: 232 EIIMGNITLSRYTRPTPVQKYAIPIIKTKRDLMACAQTGSGKTAAFLLPVLSQI 285
Score = 47 (21.6 bits), Expect = 5.4e-48, Sum P(3) = 5.4e-48
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 3 NSRGRYPPGIGSGRGGVNASNPSFQSSRPQQQY 35
+SRGRY G G G GG ++ + SR ++ +
Sbjct: 149 SSRGRYERG-GFG-GGTGGNSRWVEESRDEEDW 179
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 385 (140.6 bits), Expect = 5.8e-48, Sum P(3) = 5.8e-48
Identities = 90/261 (34%), Positives = 139/261 (53%)
Query: 192 VILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 251
++L PTRELALQ ++ +++ V GG + I L + HLLV TPGR+LD
Sbjct: 302 LVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLLD 361
Query: 252 LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIR--FLPAN--RQILMFSATFPVTV 307
+ ++G L C+ LV+DEAD++L F+P + +++ +P RQ +MFSATFP +
Sbjct: 362 MMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGLRQTMMFSATFPKEI 421
Query: 308 KDFKDKYLQKPYVINLMDEL--TLKGITQYYAFVEERQKVHCLNTLFSKL-QINQSIIFC 364
+ +L+ Y+ + + T + ITQ +VEE K L L + + + +++F
Sbjct: 422 QILARDFLED-YIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATGKDSLTLVFV 480
Query: 365 NSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQ 424
+ + L + GY+C IH Q R H FR+G C LV T + RG+DI
Sbjct: 481 ETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILVATAVAARGLDIS 540
Query: 425 AVNVVINFDFPKNSETYLHRV 445
V VINFD P + E Y+HR+
Sbjct: 541 NVKHVINFDLPSDIEEYVHRI 561
Score = 121 (47.7 bits), Expect = 5.8e-48, Sum P(3) = 5.8e-48
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 130 ELLMG-IFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQD 185
E++MG I + RP+P+Q+ +IPI + D++A A+ G+GKTAAF +P L +I D
Sbjct: 217 EIIMGNINLSRYTRPTPVQKHAIPIIKSKRDLMACAQTGSGKTAAFLLPVLSQIYTD 273
Score = 43 (20.2 bits), Expect = 5.8e-48, Sum P(3) = 5.8e-48
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 2 NNSRGRYPPGIGSGRGG 18
++SRGRY G G G GG
Sbjct: 136 SSSRGRYERG-GFGGGG 151
>UNIPROTKB|F1RVF0 [details] [associations]
symbol:LOC100512980 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:ESATTFE
Ensembl:ENSSSCT00000012145 Uniprot:F1RVF0
Length = 462
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 120/339 (35%), Positives = 192/339 (56%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK ELL GI+ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 78 FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAML 137
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKH-LNIQVMVTTGGTSLK--DDIMRLY 236
+++ Q + L PT ELALQT +V + +G+ +++QVM G + DI +
Sbjct: 138 SRVNALELFPQCLCLAPTYELALQTGRVVERMGRFCVDVQVMYAIRGNRIPRGTDITK-- 195
Query: 237 QPVHLLVGTPGRILDLS-KKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANR 294
+++GTPG +LD K+ + L + V+DEAD ++ + F ++ R LP+
Sbjct: 196 ---QIIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSGC 252
Query: 295 QILMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ-KVHCLNTLF 352
Q+L+FSATF +V F ++ + P VI L +ELTL I QYY R+ K L ++
Sbjct: 253 QMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIY 312
Query: 353 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 412
+ I Q+IIFC + + L ++ + G+ + ++ D R + FR+G + L+
Sbjct: 313 GGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLRGELTVDQRAAIIQRFRDGKEKVLI 372
Query: 413 CTDLFTRGIDIQAVNVVINFDFPKNS------ETYLHRV 445
T++ RGID++ V +V+NFD P N ETYLHR+
Sbjct: 373 TTNVCARGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRI 411
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 112/334 (33%), Positives = 185/334 (55%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F L +L I + G+ +P+ IQ+++IP+ L G DI+A A+ GTGKTA+F +P LE+
Sbjct: 3 FSTLKLSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLEQ 62
Query: 182 IDQDNNV---------IQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDI 232
++ I+ +ILVPTRELA+Q + K+L+I M GG ++
Sbjct: 63 LNSQYKETGKKLRAKRIRALILVPTRELAVQVEASISQYAKYLDISSMAMYGGVDAQEQK 122
Query: 233 MRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPA 292
RL V +LV TPGR+LD++ + V + MLV+DEAD++L F + ++I LP
Sbjct: 123 QRLIWGVDILVATPGRLLDMTHQRVLHFDELDMLVLDEADRMLDMGFIDDINKIIERLPE 182
Query: 293 NRQILMFSATFPVTVKDFKDKYLQKPYVINL-MDELTLKGITQYYAFVEERQKVHCLNTL 351
+RQ L+FSAT V+ + + KP I++ D+ + I Q+ V++ K L+ +
Sbjct: 183 HRQNLLFSATMSEEVRGLAKRTIHKPVEISIGADKASKPKIEQWLVTVDKANKSALLSHI 242
Query: 352 FSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNL 411
+ Q++IF + + L ++ + G IH+ QD R ++ +DF++G + L
Sbjct: 243 ITTQNWQQALIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREKILNDFKSGKIKFL 302
Query: 412 VCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
V T + RG+DI ++ VIN+D P + Y+HR+
Sbjct: 303 VATAIAARGLDIGELSRVINYDLPAQVDDYIHRI 336
>MGI|MGI:1353582 [details] [associations]
symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 25"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISO] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006200 "ATP catabolic process"
evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IDA]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1353582 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:29118
OrthoDB:EOG4NS3BD OMA:WHFAERI ChiTaRS:DDX25 EMBL:AF142630
EMBL:AY380091 EMBL:AY380080 EMBL:AY380081 EMBL:AY380082
EMBL:AY380083 EMBL:AY380084 EMBL:AY380085 EMBL:AY380086
EMBL:AY380087 EMBL:AY380088 EMBL:AY380089 EMBL:AY380090
EMBL:AK050693 EMBL:AK078340 EMBL:BC024852 EMBL:BC061130
IPI:IPI00135420 IPI:IPI00759935 RefSeq:NP_038960.2
UniGene:Mm.291723 ProteinModelPortal:Q9QY15 SMR:Q9QY15
STRING:Q9QY15 PhosphoSite:Q9QY15 PaxDb:Q9QY15 PRIDE:Q9QY15
Ensembl:ENSMUST00000034612 GeneID:30959 KEGG:mmu:30959
UCSC:uc012gqi.1 InParanoid:Q9QY15 NextBio:307448 Bgee:Q9QY15
CleanEx:MM_DDX25 Genevestigator:Q9QY15
GermOnline:ENSMUSG00000032101 Uniprot:Q9QY15
Length = 484
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 119/337 (35%), Positives = 191/337 (56%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK ELL GI+ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 100 FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAML 159
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKH-LNIQVMVTTGGTSLKDDIMRLYQP 238
+++ Q + L PT ELALQT +V + +GK ++++VM G + Q
Sbjct: 160 SRVNALELFPQCLCLAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRIPRGTEVTKQ- 218
Query: 239 VHLLVGTPGRILDLS-KKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANRQI 296
+++GTPG +LD K+ + L + V+DEAD ++ + F ++ R LP+ Q+
Sbjct: 219 --IIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSECQM 276
Query: 297 LMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ-KVHCLNTLFSK 354
L+FSATF +V F ++ + P VI L +ELTL I QYY E R+ K L ++
Sbjct: 277 LLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCENRKGKYQALCNIYGG 336
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
+ I Q+IIFC + + L ++ + G+ + ++ + R + FR+G + L+ T
Sbjct: 337 ITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITT 396
Query: 415 DLFTRGIDIQAVNVVINFDFPKNS------ETYLHRV 445
++ RGID++ V +V+NFD P N ETYLHR+
Sbjct: 397 NVCARGIDVKQVTIVVNFDLPVNQSEEPDYETYLHRI 433
>RGD|68381 [details] [associations]
symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box helicase 25"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA;ISO;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISO;ISS] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO;ISS] [GO:0006417 "regulation of translation"
evidence=IEA;ISO;ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA;ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0033391 "chromatoid body" evidence=IEA;ISO;ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:68381
GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
EMBL:AF142629 IPI:IPI00213497 IPI:IPI00760145 IPI:IPI00760150
RefSeq:NP_113818.2 UniGene:Rn.224821 ProteinModelPortal:Q9QY16
SMR:Q9QY16 STRING:Q9QY16 PRIDE:Q9QY16 GeneID:58856 KEGG:rno:58856
UCSC:RGD:68381 InParanoid:Q9QY16 NextBio:611449 ArrayExpress:Q9QY16
Genevestigator:Q9QY16 GermOnline:ENSRNOG00000012260 Uniprot:Q9QY16
Length = 483
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 119/339 (35%), Positives = 193/339 (56%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK ELL GI+ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 99 FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAML 158
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKH-LNIQVMVTTGGTSLK--DDIMRLY 236
+++ Q + L PT ELALQT +V + +GK ++++VM G + D+ +
Sbjct: 159 NRVNALELFPQCLCLAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRIPRGTDVTK-- 216
Query: 237 QPVHLLVGTPGRILDLS-KKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANR 294
+++GTPG +LD K+ + L + V+DEAD ++ + F ++ R LP+
Sbjct: 217 ---QIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSEC 273
Query: 295 QILMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ-KVHCLNTLF 352
Q+L+FSATF +V F ++ + P VI L +ELTL I QYY E R+ K L ++
Sbjct: 274 QMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCENRKDKYQALCNIY 333
Query: 353 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 412
+ I Q+IIFC + + L ++ + G+ + ++ + R + FR+G + L+
Sbjct: 334 GGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLI 393
Query: 413 CTDLFTRGIDIQAVNVVINFDFPKNS------ETYLHRV 445
T++ RGID++ V +V+NFD P N ETYLHR+
Sbjct: 394 TTNVCARGIDVKQVTIVVNFDLPVNQSEEPDYETYLHRI 432
>UNIPROTKB|F1MSI6 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
GO:GO:0007286 GO:GO:0003676 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
IPI:IPI00724449 OMA:WHFAERI EMBL:DAAA02063102
Ensembl:ENSBTAT00000005587 Uniprot:F1MSI6
Length = 483
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 120/339 (35%), Positives = 192/339 (56%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK ELL GI+ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 99 FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAML 158
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKH-LNIQVMVTTGGTSLK--DDIMRLY 236
+++ Q + L PT ELALQT +V + +GK +++QVM G + D+ +
Sbjct: 159 SRVNALKLFPQCLCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNRIPRGTDVTK-- 216
Query: 237 QPVHLLVGTPGRILDLS-KKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANR 294
+++GTPG +LD K+ + L + V+DEAD ++ + F ++ R LP+
Sbjct: 217 ---QIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFADQSIRIQRALPSEC 273
Query: 295 QILMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ-KVHCLNTLF 352
Q+L+FSATF +V F ++ + P VI L +ELTL I QYY R+ K L ++
Sbjct: 274 QMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIY 333
Query: 353 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 412
+ I Q+IIFC + + L ++ + G+ + ++ D R + FR+G + L+
Sbjct: 334 GGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLI 393
Query: 413 CTDLFTRGIDIQAVNVVINFDFPKNS------ETYLHRV 445
T++ RGID++ V +V+NFD P N ETYLHR+
Sbjct: 394 TTNVCARGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRI 432
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 112/341 (32%), Positives = 182/341 (53%)
Query: 107 TRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKN 166
T +TE VT + F L LL + GF + IQ +IP L G D+L A+
Sbjct: 2 TDQKTETVTEPEAVAFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQT 61
Query: 167 GTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLN-IQVMVTTGG 225
GTGKTAAF +PAL KID Q+++L PTRELA+Q ++ + GK + ++V GG
Sbjct: 62 GTGKTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGG 121
Query: 226 TSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQ 285
S +L + ++VGTPGR++D ++ L + + V+DEAD++L+ F ++
Sbjct: 122 QSYGPQFQQLERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQW 181
Query: 286 LIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKG-ITQYYAFVEERQK 344
++ +P Q+ +FSAT P ++ +++L+ P I + K ITQY V K
Sbjct: 182 ILDHIPKTAQMCLFSATMPPAIRKIANRFLKDPEHIKVAAVKKAKANITQYAWKVSGITK 241
Query: 345 VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFR 404
+ L + ++ + IIF + N +A+K+ GY ++ + Q R R +
Sbjct: 242 MTALERIAEVVEYDAMIIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQRERCIDQMK 301
Query: 405 NGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
+G LV TD+ RG+DI +++VIN+D P ++E Y+HR+
Sbjct: 302 SGKSSILVATDVVARGLDIPRISLVINYDLPGDNEAYVHRI 342
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 112/336 (33%), Positives = 190/336 (56%)
Query: 113 DVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTA 172
+V TK F+D + L + G+ +P+ IQ E+IP+AL G DI+ A+ G+GKT
Sbjct: 21 EVEETK--TFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTG 78
Query: 173 AFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDI 232
AF +P L + + + ++L PTRELA Q S+ + LG + +Q V GG
Sbjct: 79 AFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQS 138
Query: 233 MRLYQPVHLLVGTPGRILDL--SKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFL 290
+ L + H+++ TPGR++D + KG L+ LVMDEAD++L+ +F+ V+++++ +
Sbjct: 139 LALAKKPHIVIATPGRLIDHLENTKGFN-LRALKYLVMDEADRILNMDFETEVDKILKVI 197
Query: 291 PANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDEL-TLKGITQYYAFVEERQKVHCLN 349
P +R+ +FSAT V+ + L+ P + + T++ + QYY F+ + K L
Sbjct: 198 PRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLV 257
Query: 350 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 409
+ ++L N +IFC++ N + A + LG++ +H +M Q R + F+ A
Sbjct: 258 YILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARS 317
Query: 410 NLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
L+ TD+ +RG+DI V+VV+NFD P +S+ Y+HRV
Sbjct: 318 ILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRV 353
>UNIPROTKB|J3QL17 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP000842 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:18698
ChiTaRS:DDX25 Ensembl:ENST00000530414 Uniprot:J3QL17
Length = 468
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 121/339 (35%), Positives = 192/339 (56%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK ELL GI+ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 102 FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAML 161
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKH-LNIQVMVTTGGTSLK--DDIMRLY 236
+++ Q + L PT ELALQT +V +++GK +++QVM G + DI +
Sbjct: 162 SRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITK-- 219
Query: 237 QPVHLLVGTPGRILDLSKKGVCI-LKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANR 294
+++GTPG +LD K I L + V+DEAD ++ + F ++ R LP+
Sbjct: 220 ---QIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSEC 276
Query: 295 QILMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ-KVHCLNTLF 352
Q+L+FSATF +V F ++ + P VI L +ELTL I QYY E R+ K L ++
Sbjct: 277 QMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIY 336
Query: 353 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 412
+ I Q+IIFC + + L ++ + G+ + ++ + R + FR+G + L+
Sbjct: 337 GSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLI 396
Query: 413 CTDLFTRGIDIQAVNVVINFDFPKNS------ETYLHRV 445
T++ RGID++ V +V+NFD P ETYLHR+
Sbjct: 397 TTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRI 435
>UNIPROTKB|Q9UHL0 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006406 "mRNA export from
nucleus" evidence=ISS] [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0033391 "chromatoid body" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 EMBL:CH471065
GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
EMBL:AF155140 EMBL:AY735312 EMBL:AY735301 EMBL:AY735302
EMBL:AY735303 EMBL:AY735304 EMBL:AY735305 EMBL:AY735306
EMBL:AY735307 EMBL:AY735308 EMBL:AY735309 EMBL:AY735310
EMBL:AY735311 EMBL:AK312772 EMBL:BC035388 EMBL:BC050360
IPI:IPI00296139 IPI:IPI00759454 RefSeq:NP_037396.3
UniGene:Hs.420263 PDB:2RB4 PDBsum:2RB4 ProteinModelPortal:Q9UHL0
SMR:Q9UHL0 STRING:Q9UHL0 PhosphoSite:Q9UHL0 DMDM:61222937
PaxDb:Q9UHL0 PRIDE:Q9UHL0 Ensembl:ENST00000263576 GeneID:29118
KEGG:hsa:29118 UCSC:uc001qcz.4 GeneCards:GC11P125773
HGNC:HGNC:18698 HPA:HPA020090 HPA:HPA020137 MIM:607663
neXtProt:NX_Q9UHL0 PharmGKB:PA38644 InParanoid:Q9UHL0 OMA:WHFAERI
PhylomeDB:Q9UHL0 ChiTaRS:DDX25 EvolutionaryTrace:Q9UHL0
GenomeRNAi:29118 NextBio:52207 ArrayExpress:Q9UHL0 Bgee:Q9UHL0
CleanEx:HS_DDX25 Genevestigator:Q9UHL0 GermOnline:ENSG00000109832
Uniprot:Q9UHL0
Length = 483
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 121/339 (35%), Positives = 192/339 (56%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK ELL GI+ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 99 FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAML 158
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKH-LNIQVMVTTGGTSLK--DDIMRLY 236
+++ Q + L PT ELALQT +V +++GK +++QVM G + DI +
Sbjct: 159 SRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITK-- 216
Query: 237 QPVHLLVGTPGRILDLSKKGVCI-LKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANR 294
+++GTPG +LD K I L + V+DEAD ++ + F ++ R LP+
Sbjct: 217 ---QIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSEC 273
Query: 295 QILMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ-KVHCLNTLF 352
Q+L+FSATF +V F ++ + P VI L +ELTL I QYY E R+ K L ++
Sbjct: 274 QMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIY 333
Query: 353 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 412
+ I Q+IIFC + + L ++ + G+ + ++ + R + FR+G + L+
Sbjct: 334 GSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLI 393
Query: 413 CTDLFTRGIDIQAVNVVINFDFPKNS------ETYLHRV 445
T++ RGID++ V +V+NFD P ETYLHR+
Sbjct: 394 TTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRI 432
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 110/330 (33%), Positives = 183/330 (55%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
FE + E+L I + G+++ +PIQ+++IP G D+LA A+ GTGKTAAF +P L+K
Sbjct: 3 FESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 182 -IDQDNNVIQ----VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY 236
++ + ++ V+IL PTRELA Q ++ + K+LN V+ GG ++ +L
Sbjct: 63 MVENPSETLKSNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQKLK 122
Query: 237 QPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQI 296
+ ++V TPGR+L+ L LV+DEAD++L F ++++++ + RQ
Sbjct: 123 RGADIIVATPGRLLEHLTACNLSLSSVDFLVLDEADRMLDMGFSADIQKILQAVNKKRQN 182
Query: 297 LMFSATFPVTVKDFKDKYLQKPYVINL-MDELTLKGITQYYAFVEERQKVHCLNTLFSKL 355
L+FSATF VK ++ + KP VI+ T ++Q VE+R+K L+ L K
Sbjct: 183 LLFSATFSSAVKKLANEMMIKPQVISADKQNTTADTVSQVVYPVEQRRKRELLSELIGKK 242
Query: 356 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 415
Q ++F + + + L K++ G +H + Q R R +F +G R LV T+
Sbjct: 243 NWQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGKVRVLVATE 302
Query: 416 LFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
+ RG+DI ++ V+NFD P +E Y+HR+
Sbjct: 303 VAARGLDIPSLEYVVNFDLPFLAEDYVHRI 332
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 115/348 (33%), Positives = 190/348 (54%)
Query: 107 TRYRTEDVTATKGNE------FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDI 160
+R +D T T G E F++ + +L G++ P+PIQ ++IP+AL G D+
Sbjct: 27 SRGSAKDETQTSGEEPAPAKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDV 86
Query: 161 LARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVM 220
+ A+ G+GKTAAF +P L+ + + + ++L PTRELA Q SQ + LG + ++
Sbjct: 87 IGLAETGSGKTAAFALPMLQALMEAPQTLFGLVLAPTRELAYQISQAFETLGSTIGVRCA 146
Query: 221 VTTGGTSLKDDIMRLYQPVHLLVGTPGRILDL--SKKGVCILKDCSMLVMDEADKLLSPE 278
V GG + + L + H++V TPGR+LD + KG L++ L +DEAD+LL +
Sbjct: 147 VIVGGMDMVAQSIALGKKPHIIVATPGRLLDHLENTKGFS-LRNLKYLAIDEADRLLDMD 205
Query: 279 FQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDEL-TLKGITQYYA 337
F S++++IR LP R +FSAT V+ + L P +++ + T+ + Y
Sbjct: 206 FGESLDKIIRILPRTRHTYLFSATMSTKVESLQRASLSNPVRVSVSSKYQTVSTLQSSYI 265
Query: 338 FVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRN 397
+ + K L L ++ +IIF +V+ + +A + LG+ +H ++ Q R
Sbjct: 266 CIPHKHKNLYLVYLLNEFAGQSAIIFTTTVHETQRVAFMLRALGFGAIPLHGQLSQSARL 325
Query: 398 RVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
FR+ + LV TD+ RG+DI +V+VV NFD P +S+TY+HRV
Sbjct: 326 GALGKFRSRSRDILVATDVAARGLDIPSVDVVFNFDLPMDSKTYIHRV 373
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 503 (182.1 bits), Expect = 1.5e-47, P = 1.5e-47
Identities = 113/344 (32%), Positives = 190/344 (55%)
Query: 113 DVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTA 172
D T EFE+ ++ I ++GF +P+ IQ + PIA++G D++ A+ G+GKT
Sbjct: 150 DQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTL 209
Query: 173 AFCIPALEKIDQDNNVIQ-----VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTS 227
A+ +PA+ I+ + + ++L PTRELA Q QV E G + +++ GG
Sbjct: 210 AYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAP 269
Query: 228 LKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLI 287
L + V +++ TPGR++D ++G LK C+ LV+DEAD++L F+P + +++
Sbjct: 270 KGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIM 329
Query: 288 RFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKG---ITQYYAFVEERQK 344
+ + +RQ+LM+SAT+P V+ +++L +N+ L+L I Q +E +K
Sbjct: 330 QQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNI-GSLSLSANHNILQIVDVCDENEK 388
Query: 345 VHCLNTLFSKLQIN---QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFH 401
+ L L + + ++IIF + RV+ + + I+ G+ IH Q R+ V
Sbjct: 389 LMKLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLS 448
Query: 402 DFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
FRNG LV TD+ RG+D+ V VIN+D+P NSE Y+HR+
Sbjct: 449 SFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRI 492
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 120/366 (32%), Positives = 199/366 (54%)
Query: 86 EAAVD---PSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFER 142
E+AVD P D A P E+ T T F+D + L + G+ +
Sbjct: 22 ESAVDMAAPEEHDSPAEEPQPAVQ-----EEETKT----FKDLGVTDVLCEACDQLGWTK 72
Query: 143 PSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELAL 202
P+ IQ E+IP+AL G DI+ A+ G+GKT AF +P L + + + ++L PTRELA
Sbjct: 73 PTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAF 132
Query: 203 QTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDL--SKKGVCIL 260
Q S+ + LG + +Q V GG + L + H+++ TPGR++D + KG L
Sbjct: 133 QISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFN-L 191
Query: 261 KDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYV 320
+ LVMDEAD++L+ +F+ V+++++ +P +R+ +FSAT V+ + L+ P
Sbjct: 192 RALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVK 251
Query: 321 INLMDEL-TLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITE 379
+ + T++ + QYY F+ + K L + ++L N +IFC++ N + A +
Sbjct: 252 CAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRN 311
Query: 380 LGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSE 439
LG++ +H +M Q R + F+ A L+ TD+ +RG+DI V+VV+NFD P +S+
Sbjct: 312 LGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSK 371
Query: 440 TYLHRV 445
Y+HRV
Sbjct: 372 DYIHRV 377
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 109/327 (33%), Positives = 186/327 (56%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F+D + L + G+ +P+ IQ E+IP+AL G DI+ A+ G+GKT AF +P L
Sbjct: 26 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
+ + + ++L PTRELA Q S+ + LG + +Q V GG + L + H+
Sbjct: 86 LLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHI 145
Query: 242 LVGTPGRILDL--SKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMF 299
++ TPGR++D + KG L+ LVMDEAD++L+ +F+ V+++++ +P +R+ +F
Sbjct: 146 IIATPGRLIDHLENTKGFN-LRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLF 204
Query: 300 SATFPVTVKDFKDKYLQKPYVINLMDEL-TLKGITQYYAFVEERQKVHCLNTLFSKLQIN 358
SAT V+ + L+ P + + T++ + QYY F+ + K L + ++L N
Sbjct: 205 SATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGN 264
Query: 359 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 418
+IFC++ N + A + LG++ +H +M Q R + F+ A L+ TD+ +
Sbjct: 265 SFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVAS 324
Query: 419 RGIDIQAVNVVINFDFPKNSETYLHRV 445
RG+DI V+VV+NFD P +S+ Y+HRV
Sbjct: 325 RGLDIPHVDVVVNFDIPTHSKDYIHRV 351
>UNIPROTKB|I3L976 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF Ensembl:ENSSSCT00000025539 Uniprot:I3L976
Length = 456
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 109/327 (33%), Positives = 186/327 (56%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F+D + L + G+ +P+ IQ E+IP+AL G DI+ A+ G+GKT AF +P L
Sbjct: 25 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 84
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
+ + + ++L PTRELA Q S+ + LG + +Q V GG + L + H+
Sbjct: 85 LLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHI 144
Query: 242 LVGTPGRILDL--SKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMF 299
++ TPGR++D + KG L+ LVMDEAD++L+ +F+ V+++++ +P +R+ +F
Sbjct: 145 VIATPGRLIDHLENTKGFN-LRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLF 203
Query: 300 SATFPVTVKDFKDKYLQKPYVINLMDEL-TLKGITQYYAFVEERQKVHCLNTLFSKLQIN 358
SAT V+ + L+ P + + T++ + QYY F+ + K L + ++L N
Sbjct: 204 SATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGN 263
Query: 359 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 418
+IFC++ N + A + LG++ +H +M Q R + F+ A L+ TD+ +
Sbjct: 264 SFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVAS 323
Query: 419 RGIDIQAVNVVINFDFPKNSETYLHRV 445
RG+DI V+VV+NFD P +S+ Y+HRV
Sbjct: 324 RGLDIPHVDVVVNFDIPTHSKDYIHRV 350
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 112/329 (34%), Positives = 172/329 (52%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F L +L I EKG+ PSPIQ ++IP L G D++A A+ GTGKTA F +P LE
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
Query: 182 IDQDNNV----IQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQ 237
+ + V ++ +IL PTRELA Q G+HL ++ V GG + + R+ +
Sbjct: 63 LAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCK 122
Query: 238 PVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQIL 297
+LV TPGR++DL + +LV+DEAD++L F + ++++ LP RQ L
Sbjct: 123 GADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNL 182
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLMD-ELTLKGITQYYAFVEERQKVHCLNTLFSKLQ 356
+FSATF +++ + P I++ T + + Q + ++K L L +
Sbjct: 183 LFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLVKEGN 242
Query: 357 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
Q ++F + + LA + E G + IH Q R R DF+ G R LV TD+
Sbjct: 243 WQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATDI 302
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGIDI + V+NF+ PK +E Y+HR+
Sbjct: 303 AARGIDIPQLPQVVNFELPKIAEDYVHRI 331
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 112/329 (34%), Positives = 172/329 (52%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F L +L I EKG+ PSPIQ ++IP L G D++A A+ GTGKTA F +P LE
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
Query: 182 IDQDNNV----IQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQ 237
+ + V ++ +IL PTRELA Q G+HL ++ V GG + + R+ +
Sbjct: 63 LAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCK 122
Query: 238 PVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQIL 297
+LV TPGR++DL + +LV+DEAD++L F + ++++ LP RQ L
Sbjct: 123 GADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNL 182
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLMD-ELTLKGITQYYAFVEERQKVHCLNTLFSKLQ 356
+FSATF +++ + P I++ T + + Q + ++K L L +
Sbjct: 183 LFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLVKEGN 242
Query: 357 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
Q ++F + + LA + E G + IH Q R R DF+ G R LV TD+
Sbjct: 243 WQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATDI 302
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGIDI + V+NF+ PK +E Y+HR+
Sbjct: 303 AARGIDIPQLPQVVNFELPKIAEDYVHRI 331
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 109/327 (33%), Positives = 186/327 (56%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F+D + L + G+ +P+ IQ E+IP+AL G DI+ A+ G+GKT AF +P L
Sbjct: 26 FKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
+ + + ++L PTRELA Q S+ + LG + +Q V GG + L + H+
Sbjct: 86 LLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHI 145
Query: 242 LVGTPGRILDL--SKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMF 299
++ TPGR++D + KG L+ LVMDEAD++L+ +F+ V+++++ +P +R+ +F
Sbjct: 146 VIATPGRLIDHLENTKGFN-LRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLF 204
Query: 300 SATFPVTVKDFKDKYLQKPYVINLMDEL-TLKGITQYYAFVEERQKVHCLNTLFSKLQIN 358
SAT V+ + L+ P + + T++ + QYY F+ + K L + ++L N
Sbjct: 205 SATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGN 264
Query: 359 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 418
+IFC++ N + A + LG++ +H +M Q R + F+ A L+ TD+ +
Sbjct: 265 SFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVAS 324
Query: 419 RGIDIQAVNVVINFDFPKNSETYLHRV 445
RG+DI V+VV+NFD P +S+ Y+HRV
Sbjct: 325 RGLDIPHVDVVVNFDIPTHSKDYIHRV 351
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 109/327 (33%), Positives = 186/327 (56%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F+D + L + G+ +P+ IQ E+IP+AL G DI+ A+ G+GKT AF +P L
Sbjct: 26 FKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85
Query: 182 IDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
+ + + ++L PTRELA Q S+ + LG + +Q V GG + L + H+
Sbjct: 86 LLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHI 145
Query: 242 LVGTPGRILDL--SKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMF 299
++ TPGR++D + KG L+ LVMDEAD++L+ +F+ V+++++ +P +R+ +F
Sbjct: 146 VIATPGRLIDHLENTKGFN-LRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLF 204
Query: 300 SATFPVTVKDFKDKYLQKPYVINLMDEL-TLKGITQYYAFVEERQKVHCLNTLFSKLQIN 358
SAT V+ + L+ P + + T++ + QYY F+ + K L + ++L N
Sbjct: 205 SATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGN 264
Query: 359 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 418
+IFC++ N + A + LG++ +H +M Q R + F+ A L+ TD+ +
Sbjct: 265 SFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVAS 324
Query: 419 RGIDIQAVNVVINFDFPKNSETYLHRV 445
RG+DI V+VV+NFD P +S+ Y+HRV
Sbjct: 325 RGLDIPHVDVVVNFDIPTHSKDYIHRV 351
>DICTYBASE|DDB_G0281711 [details] [associations]
symbol:ddx27 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281711 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_640597.1 HSSP:Q5STU4 ProteinModelPortal:Q54TJ4
STRING:Q54TJ4 EnsemblProtists:DDB0234201 GeneID:8623207
KEGG:ddi:DDB_G0281711 OMA:SEYRAIR Uniprot:Q54TJ4
Length = 783
Score = 501 (181.4 bits), Expect = 1.9e-47, P = 1.9e-47
Identities = 127/381 (33%), Positives = 199/381 (52%)
Query: 77 DEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIF 136
+E EK + + + + KI + + + + + FE+ L R LL +
Sbjct: 147 NENEKEINKKQQQQQQQSNKQTTDKIKVLQSNRKLKKIVEEELPTFEELHLSRPLLKAVQ 206
Query: 137 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI---DQDNNVIQVVI 193
+ GF +P+PIQ ++IP+AL G DILA A G+GKTAAF +P LE++ D + I+V+I
Sbjct: 207 KLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLI 266
Query: 194 LVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD-- 251
L+PTRELALQ V + L + NI + GG S K + L + +++ TPGR++D
Sbjct: 267 LLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEVELRKSPDVVIATPGRLIDHL 326
Query: 252 LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFK 311
L+ G+ L D +L++DEAD+LL F+ + +++ P NRQ ++FSAT VK
Sbjct: 327 LNAHGIG-LDDLEILILDEADRLLDMGFKDEINKIVESCPTNRQTMLFSATLNDEVKTLA 385
Query: 312 DKYLQKPYVINLMDELTLKGITQYYAFVEER-----QKVHCLNTLFSKLQINQ--SIIFC 364
LQ+P + + D L T FV+ + + L +L +++ NQ +IIFC
Sbjct: 386 KLSLQQPIRVQV-DALMQVTSTLEQEFVKIKPQHLSDRPAILLSLCTRV-FNQGGTIIFC 443
Query: 365 NSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQ 424
S V L +H + Q+ R FR+G L+ +D+ +RG+DI
Sbjct: 444 RSKKEVHRLRIIFGLSDLKAAELHGNLSQEQRFDSLQQFRDGQVNYLLASDVASRGLDII 503
Query: 425 AVNVVINFDFPKNSETYLHRV 445
V VIN++ P N Y+HRV
Sbjct: 504 GVKTVINYNMPNNMANYIHRV 524
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 109/350 (31%), Positives = 196/350 (56%)
Query: 106 DTRYRTEDV----TATKGN---EFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGS 158
+T TE+ T T G F++ + L + G+++P+ IQ E+IP+AL G
Sbjct: 58 NTHTHTEETLIEETVTTGEIHTSFKELGVTEVLCEACDQLGWKKPTKIQIEAIPVALQGR 117
Query: 159 DILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQ 218
D++ A+ G+GKT AF +P L+ + + ++L PTRELA Q ++ LG + ++
Sbjct: 118 DVIGLAETGSGKTGAFAVPVLQSLLACAQRLHTLVLTPTRELAFQIAEQFDALGSSIGVK 177
Query: 219 VMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSK--KGVCILKDCSMLVMDEADKLLS 276
V GG + + L + H+++ TPGR++D + KG L+ LVMDEAD++L+
Sbjct: 178 TAVIVGGIDMMSQALVLAKKPHVVIATPGRLIDHMENTKGFN-LRALKYLVMDEADRILN 236
Query: 277 PEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDEL-TLKGITQY 335
+F+ V+++++ +P +R+ +FSAT V+ + LQ P ++ + T+ + Q+
Sbjct: 237 MDFESEVDKILKVIPRDRRTFLFSATMTKKVQKLQRAALQDPVKCSVSSKYATVDKLQQF 296
Query: 336 YAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDH 395
Y F+ + K L ++ ++L N ++FC + N + +A + LG + +H +M Q+
Sbjct: 297 YIFIPSKYKDCYLVSILNELAGNSFMVFCGTCNNTQRVALLLRNLGITAIPLHGQMSQNK 356
Query: 396 RNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
R + F++ + L+ TD+ +RG+DI V+ VINFD P +S+ Y+HRV
Sbjct: 357 RLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINFDIPTHSKDYIHRV 406
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 497 (180.0 bits), Expect = 2.1e-47, P = 2.1e-47
Identities = 119/356 (33%), Positives = 186/356 (52%)
Query: 108 RYRTEDVTATKGN------EFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDIL 161
RYR E +G +F + L ++ I +G++ P+ IQ + PIA++GS+ +
Sbjct: 263 RYREEQEITVRGQVPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFV 322
Query: 162 ARAKNGTGKTAAFCIPALEKIDQDNNVIQ-----VVILVPTRELALQTSQVCKELGKHLN 216
AK G+GKT + +PA+ I+ + + ++L PTRELA Q QV E G
Sbjct: 323 GIAKTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSY 382
Query: 217 IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLS 276
++ GG + L + +++ TPGR++D G LK C+ LV+DEAD++L
Sbjct: 383 VRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLD 442
Query: 277 PEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMD-ELTLK-GITQ 334
F+P + +++ + +RQ LM+SAT+P VK + +L IN+ EL+ I Q
Sbjct: 443 MGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQ 502
Query: 335 YYAFVEERQKVHCLNTLFSKL-QINQS----IIFCNSVNRVELLAKKITELGYSCFYIHA 389
+E K L TL S + ++S IIF + RV+ L + I G C IH
Sbjct: 503 VVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHG 562
Query: 390 KMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
Q R+ V +FR+G LV TD+ RG+D+ + VINFD+P+NSE Y+HR+
Sbjct: 563 DKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRI 618
>UNIPROTKB|Q5ZLB0 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 CTD:51202
HOVERGEN:HBG100512 KO:K14777 OMA:IFIPSKF OrthoDB:EOG4TXBRS
EMBL:AADN02006011 EMBL:AADN02006010 EMBL:AJ719824 IPI:IPI00584081
RefSeq:NP_001007854.1 UniGene:Gga.13941 SMR:Q5ZLB0 STRING:Q5ZLB0
Ensembl:ENSGALT00000019245 GeneID:417959 KEGG:gga:417959
InParanoid:Q5ZLB0 NextBio:20821184 Uniprot:Q5ZLB0
Length = 453
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 111/338 (32%), Positives = 190/338 (56%)
Query: 112 EDVTATK-GNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 170
E+V + F+D + L + G++ P+ IQ E+IP+AL G DI+ A+ G+GK
Sbjct: 16 EEVPVVEEARSFKDLGVTDVLCEACDQLGWKVPTKIQVEAIPVALQGRDIIGLAETGSGK 75
Query: 171 TAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKD 230
T AF +P L+ + + ++L PTRELA Q S+ + LG + + V GG
Sbjct: 76 TGAFALPILQALLDAPQRLFALVLTPTRELAFQISEQFEALGSSIGVHSAVIVGGIDSMS 135
Query: 231 DIMRLYQPVHLLVGTPGRILDL--SKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIR 288
+ L + H+++ TPGR++D + KG L+ LVMDEAD++L+ +F+ V+++++
Sbjct: 136 QSLALAKKPHIIIATPGRLVDHLENTKGFN-LRALKFLVMDEADRILNMDFETEVDKILK 194
Query: 289 FLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDEL-TLKGITQYYAFVEERQKVHC 347
+P +R+ +FSAT V+ + L+ P + + T++ + QYY F+ + K
Sbjct: 195 VIPRDRKTFLFSATMTKQVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDSY 254
Query: 348 LNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGA 407
L + ++L N +IFC++ N + A + LG++ +H +M Q+ R + F+ A
Sbjct: 255 LVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNKRLGSLNKFKAKA 314
Query: 408 CRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
L+ TD+ +RG+DI V+VVINFD P +S+ Y+HRV
Sbjct: 315 RSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRV 352
>UNIPROTKB|Q9DGP9 [details] [associations]
symbol:deadsouth "ATP-dependent RNA helicase DDX25"
species:8355 "Xenopus laevis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0003724 "RNA helicase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032019 "mitochondrial cloud" evidence=IDA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0045495 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0032019 HSSP:Q9UHL0 HOVERGEN:HBG107989 CTD:29118
EMBL:AF190623 RefSeq:NP_001082017.1 UniGene:Xl.670
ProteinModelPortal:Q9DGP9 SMR:Q9DGP9 PRIDE:Q9DGP9 GeneID:398180
KEGG:xla:398180 Xenbase:XB-GENE-958142 Uniprot:Q9DGP9
Length = 483
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 121/337 (35%), Positives = 194/337 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK ELL GI+ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 99 FEELHLKNELLRGIYAMGFNRPSKIQENALPMMLADPPQNLIAQSQSGTGKTAAFVLAML 158
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDDIMRLYQP 238
++D + Q + L PT ELALQT +V +E+GK I+V+ G RL
Sbjct: 159 SRVDANKKYPQCICLSPTFELALQTGKVVEEMGKFCAGIEVIYALRGNRPGKG-SRL--E 215
Query: 239 VHLLVGTPGRILDLS-KKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLI-RFLPANRQI 296
+++GTPG +LD K + +++ S+ V+DEAD +++ + + R +P + Q+
Sbjct: 216 AQIVIGTPGTVLDWCFKLRLITVENISVFVLDEADVMINVQGHSDHSVRVKRSMPKSCQM 275
Query: 297 LMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEER-QKVHCLNTLFSK 354
L+FSATF +V F ++ + P +I L +ELTLK I Q+Y E + QK L L+
Sbjct: 276 LLFSATFEDSVWAFAERIVPDPNIIKLKKEELTLKNIQQFYDQCENKEQKYSALCNLYGV 335
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
+ I Q+I+FC + L++K+++ G+ + ++ R + FR G + LV T
Sbjct: 336 ITIAQAIVFCQTRKIASWLSQKLSDDGHQVALLSGELPVYDRADMIQRFREGREKVLVTT 395
Query: 415 DLFTRGIDIQAVNVVINFDFPKNS------ETYLHRV 445
++ RGID++ V++V+NFD P N ETYLHR+
Sbjct: 396 NVCARGIDVEQVSIVVNFDLPVNVDGSVDFETYLHRI 432
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 118/342 (34%), Positives = 174/342 (50%)
Query: 115 TATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAF 174
T T F + L LL + E + +P+PIQ +IP G D++A A G+GKTA F
Sbjct: 3 TVTTPATFTELGLITPLLARLAELEYHQPTPIQARAIPSVFAGRDLIAGANTGSGKTATF 62
Query: 175 CIPALEKIDQD---------NNVIQVVILVPTRELALQTSQVCKELGKHLN--IQVMVTT 223
+P L+K+ +D N + ++LVPTRELA Q + K H N I+ +
Sbjct: 63 ALPMLQKLREDISSGSKNSKGNFVTGLVLVPTRELAKQVADSIKSYAVHFNGEIKTLAVF 122
Query: 224 GGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSV 283
GG S+ ++ L V +LV TPGR+LDL L LV+DEAD++LS F +
Sbjct: 123 GGVSVNIQMLALRGGVDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEEL 182
Query: 284 EQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQ 343
L+ P +Q L+FSATFP V + L P I L + Q V + +
Sbjct: 183 TALLALTPKKKQTLLFSATFPEQVTTLTQELLNNPIEIQLQSA-DASTLVQRVFTVNKGE 241
Query: 344 KVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDF 403
K L L + Q Q++IF N+ + E LA+K+ + G + H Q R+RV F
Sbjct: 242 KTAVLAHLIQQEQWRQALIFVNAKHHCEHLAEKLAKRGITAAVFHGDKGQSERSRVLDGF 301
Query: 404 RNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
+ G L+ TD+ RG+DI+ + VVINF+ P++ Y+HR+
Sbjct: 302 KAGDIEVLIATDIAARGLDIEKLPVVINFNLPRSPSDYMHRI 343
>UNIPROTKB|P21693 [details] [associations]
symbol:dbpA species:83333 "Escherichia coli K-12"
[GO:0003724 "RNA helicase activity" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0033677 "DNA/RNA helicase
activity" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IMP]
[GO:0034459 "ATP-dependent 3'-5' RNA helicase activity"
evidence=IDA] [GO:0019843 "rRNA binding" evidence=IDA] [GO:0043531
"ADP binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0043531
GO:GO:0019843 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:X52647 PIR:B64884 RefSeq:NP_415859.1 RefSeq:YP_489613.1
ProteinModelPortal:P21693 SMR:P21693 IntAct:P21693 PRIDE:P21693
EnsemblBacteria:EBESCT00000004879 EnsemblBacteria:EBESCT00000014318
GeneID:12933991 GeneID:947153 KEGG:ecj:Y75_p1320 KEGG:eco:b1343
PATRIC:32117966 EchoBASE:EB0206 EcoGene:EG10210
HOGENOM:HOG000268809 KO:K05591 OMA:HIDPARF ProtClustDB:PRK11776
BioCyc:EcoCyc:EG10210-MONOMER BioCyc:ECOL316407:JW1337-MONOMER
BioCyc:MetaCyc:EG10210-MONOMER Genevestigator:P21693 GO:GO:0034459
GO:GO:0033677 InterPro:IPR005580 Pfam:PF03880 Uniprot:P21693
Length = 457
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 106/315 (33%), Positives = 172/315 (54%)
Query: 132 LMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQV 191
L + E G+ +P+Q ++P L G D+ +AK G+GKTAAF + L++ID Q
Sbjct: 15 LTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQA 74
Query: 192 VILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRIL 250
++L PTRELA Q + + L + L N +++ GG L H++V TPGR+L
Sbjct: 75 LVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLL 134
Query: 251 DLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDF 310
D +KG L + LVMDEAD++L F +++ +IRF PA+RQ L+FSAT+P +
Sbjct: 135 DHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAI 194
Query: 311 KDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRV 370
+ + P I + L I Q + + K+ L L S Q + ++FCN+
Sbjct: 195 SGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQPSSCVVFCNTKKDC 254
Query: 371 ELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVI 430
+ + + E+G S +H + Q R++ F NG+ R LV TD+ RG+DI+++ +V+
Sbjct: 255 QAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVV 314
Query: 431 NFDFPKNSETYLHRV 445
NF+ + E ++HR+
Sbjct: 315 NFELAWDPEVHVHRI 329
>CGD|CAL0003464 [details] [associations]
symbol:orf19.5991 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
CGD:CAL0003464 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003
EMBL:AACQ01000004 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_723054.1
RefSeq:XP_723201.1 STRING:Q5ANB2 GeneID:3635229 GeneID:3635325
KEGG:cal:CaO19.13412 KEGG:cal:CaO19.5991 KO:K14808 Uniprot:Q5ANB2
Length = 908
Score = 376 (137.4 bits), Expect = 4.5e-47, Sum P(2) = 4.5e-47
Identities = 81/228 (35%), Positives = 130/228 (57%)
Query: 118 KGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 177
K F + L + +L I +KG+++P+PIQ ++IP+ + G D++ A+ G+GKTAAF +P
Sbjct: 97 KAGSFASFGLTKFILANIAKKGYKQPTPIQRKTIPLIMEGRDVVGMARTGSGKTAAFVLP 156
Query: 178 ALEKI-DQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY 236
+E++ + ++ VIL P+RELALQT + KE N+Q +V GG SL++D ++
Sbjct: 157 LIERLKSRQPGGVRAVILSPSRELALQTYKQVKEFSHGTNLQSIVLIGGDSLEEDFSKMM 216
Query: 237 QPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQI 296
++V TPGR L L + L +V DEAD+L F + +L+ LP+NRQ
Sbjct: 217 TKPDIIVCTPGRFLHLKVEMQYDLMTVQYIVFDEADRLFEMGFAEQLNELLASLPSNRQS 276
Query: 297 LMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQK 344
L+FSAT P ++ DF L P ++ L E + Q F ++ +
Sbjct: 277 LLFSATLPRSLVDFAKAGLTNPVLVRLDAESKISDQLQMAYFTTKKNE 324
Score = 154 (59.3 bits), Expect = 4.5e-47, Sum P(2) = 4.5e-47
Identities = 43/121 (35%), Positives = 63/121 (52%)
Query: 325 DELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSC 384
DE KG + Y F +ER + N L S + +I+F + + VE + K + + GY
Sbjct: 368 DEERKKG-KKRYKFKKER--LPPANRLPSP---HSTIVFVPTKHHVEYVTKLLRDAGYLV 421
Query: 385 FYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHR 444
YI+ + Q R + FR G LV TD+ RGIDI + VINF P +S+ ++HR
Sbjct: 422 SYIYGTLDQHARKNQLYQFRVGLTNVLVVTDVAARGIDIPVLANVINFTLPASSKIFIHR 481
Query: 445 V 445
V
Sbjct: 482 V 482
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 469 (170.2 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 117/327 (35%), Positives = 178/327 (54%)
Query: 130 ELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKID-----Q 184
ELL G F+K P+ IQ S PIA++G DI++ AK G+GKT AF +PAL I Q
Sbjct: 143 ELLYGKFQK----PTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQ 198
Query: 185 DNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVG 244
V++L+PTRELA Q +V + L +++ GG S L + V ++V
Sbjct: 199 RGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVA 258
Query: 245 TPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFP 304
TPGR+LD G +K CS LV+DEAD++L F+P ++++I + +RQ LMFSAT+P
Sbjct: 259 TPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWP 318
Query: 305 VTVKDFKDKYLQKPYVINLMD-ELTLK-GITQYYAFVEERQKVHCLNTLFSKLQINQ--- 359
V+ + + +N+ EL ITQ +EE K L L + + +NQ
Sbjct: 319 KEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAKLMELLNHI-MNQKEC 377
Query: 360 -SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 418
+IIF + + + L + + G+ IH Q R+ V +F+ G ++ TD+
Sbjct: 378 KTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAA 437
Query: 419 RGIDIQAVNVVINFDFPKNSETYLHRV 445
RG+D+ + VIN+D+P NSE Y+HR+
Sbjct: 438 RGLDVDDIKFVINYDYPNNSEDYVHRI 464
Score = 40 (19.1 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 11 GIGSGRGGVNAS 22
G G GRGG N S
Sbjct: 61 GRGGGRGGSNGS 72
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 101/328 (30%), Positives = 172/328 (52%)
Query: 121 EFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 180
+F+ + + GI G+E P+PIQ ++IP + G D++ A+ GTGKTAAF +P L
Sbjct: 2 DFKSFGFHPAVATGIAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALPILH 61
Query: 181 KIDQ-DNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPV 239
++ Q + ++ +++ PTRELA Q + LG+ ++ + GG + + +L
Sbjct: 62 RLQQGERGRVRALVIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQVQKLKAGA 121
Query: 240 HLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMF 299
++V PGR+LD +G L +LV+DEAD++ F P + ++++ LP RQ L+F
Sbjct: 122 EVVVACPGRLLDHIAQGTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKHLPPRRQTLLF 181
Query: 300 SATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAF--VEERQKVHCLNTLFSKLQI 357
SAT P+ ++ L P + + +T +A VE+ K L L
Sbjct: 182 SATMPIDIRTLAQDILVDPVTVQV--GTVAPAVTVAHALYPVEQHLKTPLLLELLRHTDT 239
Query: 358 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 417
+IF + +R + L +++ + GY + + Q+ R FR+G + LV TD+
Sbjct: 240 ESVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQILVATDIA 299
Query: 418 TRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGID+ V+ VIN+D P +E Y+HR+
Sbjct: 300 ARGIDVSQVSHVINYDIPDTAEAYIHRI 327
>FB|FBgn0032919 [details] [associations]
symbol:CG9253 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
EMBL:AY121677 ProteinModelPortal:Q8MRB7 SMR:Q8MRB7 STRING:Q8MRB7
PaxDb:Q8MRB7 PRIDE:Q8MRB7 FlyBase:FBgn0032919 InParanoid:Q8MRB7
OrthoDB:EOG4V41Q7 ArrayExpress:Q8MRB7 Bgee:Q8MRB7 Uniprot:Q8MRB7
Length = 507
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 115/374 (30%), Positives = 199/374 (53%)
Query: 77 DEVEKTVQSEAAVDPSS--QDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMG 134
DE E E D + ++ + + D + +D + ++D L L
Sbjct: 16 DEEEDLGSEEEQEDEDNNHKEGDSEAALSGEDDKGSEDDAAEEQKLTWKDLGLNEALCQA 75
Query: 135 IFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVIL 194
E ++ PS IQ E+IP+AL G D++ A+ G+GKT AF +P L + ++ ++L
Sbjct: 76 CDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYFALVL 135
Query: 195 VPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDL-- 252
PTRELA Q + + LG + I+ V GG + ++L + H+++ TPGR++D
Sbjct: 136 TPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLE 195
Query: 253 SKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKD 312
+ KG LK LVMDEAD++L+ +F+ ++++++ LP R+ +FSAT VK +
Sbjct: 196 NMKGFN-LKAIKYLVMDEADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQR 254
Query: 313 KYLQKPYVINLMDEL-TLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVE 371
L+ P + + ++ T++ + Q Y F+ + K L + ++L N +IFC++ N
Sbjct: 255 ASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTV 314
Query: 372 LLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVIN 431
A + LG + +H +M Q+ R + F+ L+ TD+ +RG+DI V+VV+N
Sbjct: 315 KTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVN 374
Query: 432 FDFPKNSETYLHRV 445
FD P +S+ Y+HRV
Sbjct: 375 FDIPTHSKDYIHRV 388
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 112/331 (33%), Positives = 179/331 (54%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F L +L+ + E G+++P+PIQ E+IP LT D++A A+ GTGKTAAF +P L+
Sbjct: 3 FSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQL 62
Query: 182 IDQDNN------VIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRL 235
+ DN I+ ++LVPTRELALQ Q + K +I+V + GG S++
Sbjct: 63 LMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAVF 122
Query: 236 YQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQ 295
+ +L+ TPGR+LD ++G L + LV DEAD++L F ++ +++ +PA RQ
Sbjct: 123 NAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQRQ 182
Query: 296 ILMFSATFPVTVKDFKDKYLQKPYVINLMD-ELTLKGITQYYAFVEERQKVHCLNTLFSK 354
L+FSAT ++ F L+ P I + T I Q ++ +K ++ L
Sbjct: 183 TLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDRKTEFVSHLVRS 242
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
Q +IF + V+ L ++ +LG + H + Q R +V +F+ G + LV T
Sbjct: 243 KNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLVAT 302
Query: 415 DLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
D+ RG+DI + VINF+ P +E Y+HR+
Sbjct: 303 DVAARGLDIAELQYVINFELPFIAEDYIHRI 333
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 112/331 (33%), Positives = 179/331 (54%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F L +L+ + E G+++P+PIQ E+IP LT D++A A+ GTGKTAAF +P L+
Sbjct: 3 FSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQL 62
Query: 182 IDQDNN------VIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRL 235
+ DN I+ ++LVPTRELALQ Q + K +I+V + GG S++
Sbjct: 63 LMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAVF 122
Query: 236 YQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQ 295
+ +L+ TPGR+LD ++G L + LV DEAD++L F ++ +++ +PA RQ
Sbjct: 123 NAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQRQ 182
Query: 296 ILMFSATFPVTVKDFKDKYLQKPYVINLMD-ELTLKGITQYYAFVEERQKVHCLNTLFSK 354
L+FSAT ++ F L+ P I + T I Q ++ +K ++ L
Sbjct: 183 TLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDRKTEFVSHLVRS 242
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
Q +IF + V+ L ++ +LG + H + Q R +V +F+ G + LV T
Sbjct: 243 KNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLVAT 302
Query: 415 DLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
D+ RG+DI + VINF+ P +E Y+HR+
Sbjct: 303 DVAARGLDIAELQYVINFELPFIAEDYIHRI 333
>UNIPROTKB|B4DRZ7 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
UniGene:Hs.656037 HGNC:HGNC:25628 EMBL:AC012184 EMBL:AK299504
IPI:IPI01009735 SMR:B4DRZ7 STRING:B4DRZ7 Ensembl:ENST00000443119
UCSC:uc002eys.3 Uniprot:B4DRZ7
Length = 388
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 118/331 (35%), Positives = 191/331 (57%)
Query: 128 KRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPALEKIDQD 185
K +LL G++ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L +++
Sbjct: 9 KPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPS 68
Query: 186 NNVIQVVILVPTRELALQTSQVCKELGK-HLNIQVMVTTGGTSLKDDIMRLYQPVHLLVG 244
+ Q + L PT ELALQT +V +++GK + +++ G L+ ++ + + ++G
Sbjct: 69 DRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG-QKISEQI--VIG 125
Query: 245 TPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANRQILMFSAT 302
TPG +LD SK K + V+DEAD +++ + Q ++ R LP N Q+L+FSAT
Sbjct: 126 TPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSAT 185
Query: 303 FPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEER-QKVHCLNTLFSKLQINQS 360
F +V F K + P VI L +E TL I QYY R +K L L+ + I Q+
Sbjct: 186 FEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQA 245
Query: 361 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 420
+IFC++ LA ++++ G+ + +M+ + R V FR G + LV T++ RG
Sbjct: 246 MIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARG 305
Query: 421 IDIQAVNVVINFDFP------KNSETYLHRV 445
ID++ V+VVINFD P ++ETYLHR+
Sbjct: 306 IDVEQVSVVINFDLPVDKDGNPDNETYLHRI 336
>UNIPROTKB|I3L352 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:25628 EMBL:AC012184
Ensembl:ENST00000575878 Uniprot:I3L352
Length = 396
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 118/331 (35%), Positives = 191/331 (57%)
Query: 128 KRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPALEKIDQD 185
K +LL G++ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L +++
Sbjct: 17 KPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPS 76
Query: 186 NNVIQVVILVPTRELALQTSQVCKELGK-HLNIQVMVTTGGTSLKDDIMRLYQPVHLLVG 244
+ Q + L PT ELALQT +V +++GK + +++ G L+ ++ + + ++G
Sbjct: 77 DRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG-QKISEQI--VIG 133
Query: 245 TPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANRQILMFSAT 302
TPG +LD SK K + V+DEAD +++ + Q ++ R LP N Q+L+FSAT
Sbjct: 134 TPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSAT 193
Query: 303 FPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEER-QKVHCLNTLFSKLQINQS 360
F +V F K + P VI L +E TL I QYY R +K L L+ + I Q+
Sbjct: 194 FEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQA 253
Query: 361 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 420
+IFC++ LA ++++ G+ + +M+ + R V FR G + LV T++ RG
Sbjct: 254 MIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARG 313
Query: 421 IDIQAVNVVINFDFP------KNSETYLHRV 445
ID++ V+VVINFD P ++ETYLHR+
Sbjct: 314 IDVEQVSVVINFDLPVDKDGNPDNETYLHRI 344
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 113/332 (34%), Positives = 179/332 (53%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPA--- 178
FE ELL + GF P+PIQ +S PIA+ G DI+A AK G+GKT + IP
Sbjct: 160 FEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLH 219
Query: 179 LEKIDQDNNV-IQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQ 237
L++I D+ + +++L PTRELA Q + + G+ I GG + L +
Sbjct: 220 LQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLER 279
Query: 238 PVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQIL 297
++V TPGR+ D+ + L+ S LV+DEAD++L F+P + ++++ +P RQ L
Sbjct: 280 GADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTL 339
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINL--MDELTL-KGITQYYAFVEERQKVHCLNTLF-S 353
M++AT+P V+ L P +N+ +DEL K ITQ+ V +K L + S
Sbjct: 340 MYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRS 399
Query: 354 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 413
+ ++ IIFC++ + L + +T + IH Q R+ V + FR+G LV
Sbjct: 400 QEPGSKVIIFCSTKRMCDQLTRNLTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVA 458
Query: 414 TDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
TD+ RG+D++ + V+N+DFP E Y+HR+
Sbjct: 459 TDVAARGLDVKDIRAVVNYDFPNGVEDYVHRI 490
>TAIR|locus:2173517 [details] [associations]
symbol:AT5G60990 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 EMBL:AB008269 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
EMBL:AK117799 EMBL:BT005375 EMBL:AY088068 EMBL:AJ010462
IPI:IPI00518446 PIR:T51342 RefSeq:NP_568931.1 UniGene:At.20430
ProteinModelPortal:Q8GY84 SMR:Q8GY84 STRING:Q8GY84 PaxDb:Q8GY84
PRIDE:Q8GY84 EnsemblPlants:AT5G60990.1 GeneID:836220
KEGG:ath:AT5G60990 GeneFarm:923 TAIR:At5g60990 InParanoid:Q8GY84
PhylomeDB:Q8GY84 ProtClustDB:CLSN2690059 Genevestigator:Q8GY84
GermOnline:AT5G60990 Uniprot:Q8GY84
Length = 456
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 116/339 (34%), Positives = 185/339 (54%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F + ++ EL+ G++ PS IQ E++P AL G D++ A+ G+GKT AF IP L+
Sbjct: 11 FAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQA 70
Query: 182 I-----DQD-------NNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLK 229
+ D + + +L PTRELA+Q ++ + LG ++++ V GG
Sbjct: 71 LLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRM 130
Query: 230 DDIMRLYQPVHLLVGTPGRILD-LSK-KGVCILKDCSMLVMDEADKLLSPEFQPSVEQLI 287
+ L + H++V TPGR+ D +S KG LK LV+DEAD+LL+ +F+ S+ Q++
Sbjct: 131 QQTIALGKRPHVIVATPGRLWDHMSDTKGFS-LKSLKYLVLDEADRLLNEDFEKSLNQIL 189
Query: 288 RFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDEL-TLKGITQYYAFVEERQKVH 346
+P R+ +FSAT V+ + L+ P I + T+ + Q Y FV + K
Sbjct: 190 EEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAAKYKDC 249
Query: 347 CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 406
L + S++ + S+IF + + LA + LG+ I +M Q R + F+ G
Sbjct: 250 YLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAG 309
Query: 407 ACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
C LVCTD+ +RG+DI +V+VVIN+D P NS+ Y+HRV
Sbjct: 310 ECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRV 348
>POMBASE|SPAC31A2.07c [details] [associations]
symbol:dbp10 "ATP-dependent RNA helicase Dbp10
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC31A2.07c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455 OrthoDB:EOG4JWZP1
EMBL:AB027882 PIR:S59645 RefSeq:NP_592919.1
ProteinModelPortal:Q09719 STRING:Q09719 EnsemblFungi:SPAC31A2.07c.1
GeneID:2543197 KEGG:spo:SPAC31A2.07c OMA:FYIPYRP NextBio:20804220
Uniprot:Q09719
Length = 848
Score = 377 (137.8 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 81/208 (38%), Positives = 121/208 (58%)
Query: 118 KGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 177
K + F+ L + LL IF+KGF+ P+PIQ ++IP+ L G D++ A+ G+GKTAAF IP
Sbjct: 67 KASNFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIP 126
Query: 178 ALEKIDQD--NNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRL 235
+E + N+ + +IL P RELALQT +V K+ K +++ + GG SL++ L
Sbjct: 127 MIEHLKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLL 186
Query: 236 YQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQ 295
++V TPGR L L + L +V DEAD+L F + +++ LP +RQ
Sbjct: 187 SGKPDIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSRQ 246
Query: 296 ILMFSATFPVTVKDFKDKYLQKPYVINL 323
L+FSAT P T+ DF LQ P ++ L
Sbjct: 247 TLLFSATLPRTLVDFAKAGLQDPVLVRL 274
Score = 147 (56.8 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 30/88 (34%), Positives = 53/88 (60%)
Query: 358 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 417
+ +++F + + VE +++ + + GYS I+ + Q+ R ++FR G LV TD+
Sbjct: 347 DSTLVFVPTKHHVEYVSELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVA 406
Query: 418 TRGIDIQAVNVVINFDFPKNSETYLHRV 445
+RGIDI + VIN+DFP + ++HRV
Sbjct: 407 SRGIDIPLLANVINYDFPPQPKVFVHRV 434
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 498 (180.4 bits), Expect = 1.5e-46, P = 1.5e-46
Identities = 122/358 (34%), Positives = 187/358 (52%)
Query: 102 IPPADTRYRTEDVTATKGN------EFEDYFLKRELLMGIFEKGFERPSPIQEESIPIAL 155
+ P + + +VT T N FE L E+L + GF P+PIQ ++ PIAL
Sbjct: 411 LSPVEIYRKQHEVTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIAL 470
Query: 156 TGSDILARAKNGTGKTAAFCIPA---LEKIDQDN-NVIQVVILVPTRELALQTSQVCKEL 211
DI+A AK G+GKT + IPA L D+ N V+IL PTRELA Q
Sbjct: 471 QSRDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSRNGPTVLILAPTRELATQIQDEALRF 530
Query: 212 GKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEA 271
G+ I GG + L + ++V TPGR+ D+ + + + S+LV+DEA
Sbjct: 531 GRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEA 590
Query: 272 DKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL--MDELTL 329
D++L F+P + +++ +P RQ LM++AT+P V+ L P +N+ +DEL
Sbjct: 591 DRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAA 650
Query: 330 -KGITQYYAFVEERQKVHCLNTLF-SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYI 387
K ITQY V + +K L + S+ + ++ IIFC++ + LA+ + + I
Sbjct: 651 NKAITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARSVGR-HFGAVVI 709
Query: 388 HAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
H Q R+ V + FR+G L+ TD+ RG+DI+ + VVIN+DFP E Y+HR+
Sbjct: 710 HGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 767
>FB|FBgn0011802 [details] [associations]
symbol:Gem3 "Gemin3" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IMP] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0022618 "ribonucleoprotein complex
assembly" evidence=IMP] [GO:0071254 "cytoplasmic U snRNP body"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014296 GO:GO:0007528 GO:GO:0006200 GO:GO:0003676
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0016779 HSSP:P10081 KO:K13131
GeneTree:ENSGT00530000062880 GO:GO:0071254 GO:GO:0022618
EMBL:AF160911 RefSeq:NP_524019.1 UniGene:Dm.921 SMR:Q9V3C4
IntAct:Q9V3C4 MINT:MINT-750334 STRING:Q9V3C4
EnsemblMetazoa:FBtr0076292 EnsemblMetazoa:FBtr0334100 GeneID:39195
KEGG:dme:Dmel_CG6539 UCSC:CG6539-RA CTD:39195 FlyBase:FBgn0011802
InParanoid:Q9V3C4 OMA:TPTKIQA OrthoDB:EOG44MW6X GenomeRNAi:39195
NextBio:812430 Uniprot:Q9V3C4
Length = 1028
Score = 497 (180.0 bits), Expect = 1.7e-46, P = 1.7e-46
Identities = 125/347 (36%), Positives = 186/347 (53%)
Query: 110 RTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTG 169
R+ DV + FE+ L R LL G+ F P+ IQ +IP+AL D++ ++K+GTG
Sbjct: 15 RSSDVAPGQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTG 74
Query: 170 KTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSL 228
KT + I ++ + + N +I+VPTRELA+Q L K + + GGT +
Sbjct: 75 KTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDV 134
Query: 229 KDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLI 287
D R+ + +++GTPGR+L L + V + +LV+DEAD+L + Q +V +LI
Sbjct: 135 AKDRKRMNES-RVIIGTPGRLLHLYENRVFDVSKLRLLVLDEADQLYQTKSLQHTVSKLI 193
Query: 288 RFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELT-LKGITQY-YAF------V 339
+P NRQI+ SAT+ + + K + KP +I+ + T L GI Q+ Y V
Sbjct: 194 EAMPKNRQIIACSATYDQNLDERLAKVMDKPMLISNSERATVLLGIRQFVYELPQQNNSV 253
Query: 340 EE-RQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNR 398
EE R K+ L +F++L Q+IIF +S R + +T G C I M Q R
Sbjct: 254 EEMRLKLQILGQIFNQLPYEQAIIFASSQMRADSYKNYLTASGIDCHLISGAMEQSERLH 313
Query: 399 VFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
VF +RN R LV TDL RG+D N+VIN D P++ TYLHR+
Sbjct: 314 VFEGYRNFTMRILVATDLMARGVDSPHANLVINIDPPQDHVTYLHRI 360
>UNIPROTKB|F1S758 [details] [associations]
symbol:LOC100523329 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
EMBL:CU928873 Ensembl:ENSSSCT00000016589 Uniprot:F1S758
Length = 379
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 117/333 (35%), Positives = 188/333 (56%)
Query: 128 KRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPALEKIDQD 185
K ELL GI+ GF RPS IQE ++P+ L +++A++++GTGKTAAF + L +++
Sbjct: 1 KEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNAL 60
Query: 186 NNVIQVVILVPTRELALQTSQVCKELGKH-LNIQVMVTTGGTSLK--DDIMRLYQPVHLL 242
Q + L PT ELALQT +V + +G+ +++QVM G + DI + ++
Sbjct: 61 ELFPQCLCLAPTYELALQTGRVVERMGRFCVDVQVMYAIRGNRIPRGTDITK-----QII 115
Query: 243 VGTPGRILDLS-KKGVCILKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANRQILMFS 300
+GTPG +LD K+ + L + V+DEAD ++ + F ++ R LP+ Q+L+FS
Sbjct: 116 IGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSGCQMLLFS 175
Query: 301 ATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ-KVHCLNTLFSKLQIN 358
ATF +V F ++ + P VI L +ELTL I QYY R+ K L ++ + I
Sbjct: 176 ATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIYGGITIG 235
Query: 359 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 418
Q+IIFC + + L ++ + G+ + ++ D R + FR+G + L+ T++
Sbjct: 236 QAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRAAIIQRFRDGKEKVLITTNVCA 295
Query: 419 RGIDIQAVNVVINFDFPKNS------ETYLHRV 445
RGID++ V +V+NFD P N ETYLHR+
Sbjct: 296 RGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRI 328
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 113/338 (33%), Positives = 180/338 (53%)
Query: 121 EFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 180
+F + L ++L I E G+E P+PIQ +IP AL G D+L A+ GTGKTA+F +P +
Sbjct: 3 KFSELNLNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPMIT 62
Query: 181 KIDQDN---NVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQ 237
+ + + + ++L PTRELA Q ++ KHL + + GG S K+ + +
Sbjct: 63 LLARGRARARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDALIDR 122
Query: 238 PVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQIL 297
V +L+ TPGR+LD ++G +L ++V+DEAD++L F P +E++ P RQ L
Sbjct: 123 GVDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLTPFTRQTL 182
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLMDELTL-----KGITQYYAFVEERQ---KVHCLN 349
FSAT ++ + +L P I + + T +G+ + +R+ K L
Sbjct: 183 FFSATMAPEIERITNTFLSAPARIEVARQATASETIEQGVVLFKGSRRDREASEKRAVLR 242
Query: 350 TLFSKL--QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGA 407
L + +IIFCN V+++AK + + GY IH + Q R R FR G
Sbjct: 243 ALIDAEGEKCTNAIIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQRTRTLDGFREGK 302
Query: 408 CRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
R LV +D+ RG+D+ +V+ V NFD P + E Y+HR+
Sbjct: 303 LRLLVASDVAARGLDVPSVSHVFNFDVPGHPEDYVHRI 340
>WB|WBGene00012059 [details] [associations]
symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
NextBio:892086 Uniprot:P34580
Length = 489
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 109/337 (32%), Positives = 181/337 (53%)
Query: 112 EDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKT 171
+D K F + + + L G+ +PS IQ+ ++P AL G D++ A+ G+GKT
Sbjct: 36 DDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKT 95
Query: 172 AAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDD 231
AF IP L+ + ++L PTRELA Q Q + LG + + V GG +
Sbjct: 96 GAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQ 155
Query: 232 IMRLYQPVHLLVGTPGRILDL--SKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRF 289
M L + H++V TPGR++D + KG LK L+MDEAD++L+ +F+ ++++++
Sbjct: 156 AMALARRPHIIVATPGRLVDHLENTKGFN-LKALKFLIMDEADRILNMDFEVELDKILKV 214
Query: 290 LPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDEL-TLKGITQYYAFVEERQKVHCL 348
+P R+ +FSAT V + L+ P +++ T+ + Q+Y FV + K L
Sbjct: 215 IPRERRTYLFSATMTKKVSKLERASLRDPARVSVSSRYKTVDNLKQHYIFVPNKYKETYL 274
Query: 349 NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC 408
L ++ N +I+FC + +A + +LG +H +M Q+ R + F++ A
Sbjct: 275 VYLLNEHAGNSAIVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAR 334
Query: 409 RNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
LVCTD+ RG+DI V++VIN+D P S+ Y+HRV
Sbjct: 335 EILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRV 371
>UNIPROTKB|E1BGI6 [details] [associations]
symbol:DDX54 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030331 "estrogen receptor binding" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
GO:GO:0003723 GO:GO:0006396 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
OMA:FYIPYRP GeneTree:ENSGT00550000075100 EMBL:DAAA02045421
IPI:IPI00690851 Ensembl:ENSBTAT00000029525 Uniprot:E1BGI6
Length = 877
Score = 494 (179.0 bits), Expect = 2.1e-46, P = 2.1e-46
Identities = 113/347 (32%), Positives = 194/347 (55%)
Query: 106 DTR--YRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILAR 163
DTR R ++ K F+ L + GI +KG++ P+PIQ ++IP+ L G D++A
Sbjct: 80 DTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPMILDGKDVVAM 139
Query: 164 AKNGTGKTAAFCIPALEKIDQDN--NVIQVVILVPTRELALQTSQVCKELGKHLNIQVMV 221
A+ G+GKTA F IP E++ + + +IL PTRELALQT + KELGK ++ +
Sbjct: 140 ARTGSGKTACFLIPMFERLKTHSAQTGARALILSPTRELALQTMKFTKELGKFTGLKTAL 199
Query: 222 TTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQP 281
GG ++D L++ +++ TPGR++ ++ + L+ +V DEAD+L F
Sbjct: 200 ILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQSVEYVVFDEADRLFEMGFAE 259
Query: 282 SVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL-MD-ELTLKGITQYYAFV 339
++++I LP Q ++FSAT P + +F L +P +I L +D +L + T ++
Sbjct: 260 QLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLNEQLKTSFFLVR 319
Query: 340 EERQKVHCLNTLFSKLQI-NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNR 398
E+ + L+ L + ++ +Q+++F + + E L++ + G SC +I++ + Q R
Sbjct: 320 EDAKAAVLLHLLRNVVRPQDQTVVFVATKHHAEYLSELLATQGVSCAHIYSALDQTARKI 379
Query: 399 VFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
F +G C L+ TDL RG+DI ++ VIN+ FP + +LHRV
Sbjct: 380 NLARFTHGKCSALIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRV 426
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 496 (179.7 bits), Expect = 2.2e-46, P = 2.2e-46
Identities = 107/329 (32%), Positives = 182/329 (55%)
Query: 127 LKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDN 186
+ ++L + + G+E+P+PIQ ++IP + G D++ AK G+GKT AF +P I D
Sbjct: 378 ISMKILTALKKHGYEKPTPIQSQAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHI-MDQ 436
Query: 187 NVIQ------VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVH 240
++ VI+ PTRELALQ ++ CK+ K L ++V+ GGT + + I L +
Sbjct: 437 RALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAE 496
Query: 241 LLVGTPGRILDL--SKKG-VCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQIL 297
++V TPGR++D+ + G V L+ + +V+DEAD++ F+P V +++ + +RQ +
Sbjct: 497 IIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTV 556
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQ 356
MFSATFP ++ + L KP + + + + Q+ +EE K L L Q
Sbjct: 557 MFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVIEEENKFLKLLELLGHYQ 616
Query: 357 INQS-IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 415
S IIF + + L K + Y C +H + Q R+ + +DF+NG C+ LV T
Sbjct: 617 EKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDFKNGTCKLLVATS 676
Query: 416 LFTRGIDIQAVNVVINFDFPKNSETYLHR 444
+ RG+D++ + +V+N+ P + E Y+HR
Sbjct: 677 VAARGLDVKQLMLVVNYSCPNHYEDYVHR 705
>RGD|1562539 [details] [associations]
symbol:Ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 54"
species:10116 "Rattus norvegicus" [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006396
"RNA processing" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016070 "RNA metabolic process"
evidence=ISO] [GO:0030331 "estrogen receptor binding" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:1562539 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730 GO:GO:0003723
GO:GO:0006396 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000075100 IPI:IPI00193685
Ensembl:ENSRNOT00000001859 UCSC:RGD:1562539 OrthoDB:EOG469QTB
Uniprot:D3ZHY6
Length = 906
Score = 493 (178.6 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 112/347 (32%), Positives = 187/347 (53%)
Query: 106 DTR--YRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILAR 163
DTR R ++ K F+ L + GI +KG++ P+PIQ ++IP+ L G D++A
Sbjct: 79 DTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAM 138
Query: 164 AKNGTGKTAAFCIPALEKIDQDN--NVIQVVILVPTRELALQTSQVCKELGKHLNIQVMV 221
A+ G+GKTA F +P E++ + + +IL PTRELALQT + KELGK ++ +
Sbjct: 139 ARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKFTGLKTAL 198
Query: 222 TTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQP 281
GG ++D L++ +++ TPGR++ ++ + L+ +V DEAD+L F
Sbjct: 199 ILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQSVEYVVFDEADRLFEMGFAE 258
Query: 282 SVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL-MDELTLKGITQYYAFVE 340
++++I LP Q ++FSAT P + +F L +P +I L +D + + + V
Sbjct: 259 QLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLNEQLKTSFFLVR 318
Query: 341 ERQKVHCLNTLFSKL--QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNR 398
E K L L + +Q+++F + + E L + +T G SC +I++ + Q R
Sbjct: 319 EDTKTAVLLYLLQNVVRPQDQNVVFVATKHHAEYLTELLTGQGVSCAHIYSALDQTARKI 378
Query: 399 VFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
F + C L+ TDL RG+DI ++ VIN+ FP + +LHRV
Sbjct: 379 NLAKFTHNKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRV 425
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 105/329 (31%), Positives = 188/329 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F L L+ + + G+++P+ IQ ++IP+ L G D++A A+ GTGKTA+F +P LEK
Sbjct: 3 FSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEK 62
Query: 182 IDQDNNV----IQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQ 237
+ Q ++ +ILVPTRELA+Q ++ ++ GK ++ + GG + RL
Sbjct: 63 LRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLID 122
Query: 238 PVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQIL 297
V +LV TPGR++DL + ++ M+V+DEAD++L F S+ ++I LP+ Q L
Sbjct: 123 GVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQFL 182
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQKVHCLNTLFSKLQ 356
+FSAT V++ ++ P+ I++ ++ + I+Q+ V++ K L+ L ++ Q
Sbjct: 183 LFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLINEQQ 242
Query: 357 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
+Q++IF + + L ++ + G H+ Q R ++ DF++G + LV T +
Sbjct: 243 WDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVATGV 302
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGIDI ++ V+N+D P ++ Y+HR+
Sbjct: 303 AARGIDIDQLSRVVNYDLPFPADEYVHRI 331
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 105/329 (31%), Positives = 188/329 (57%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 181
F L L+ + + G+++P+ IQ ++IP+ L G D++A A+ GTGKTA+F +P LEK
Sbjct: 3 FSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEK 62
Query: 182 IDQDNNV----IQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQ 237
+ Q ++ +ILVPTRELA+Q ++ ++ GK ++ + GG + RL
Sbjct: 63 LRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLID 122
Query: 238 PVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQIL 297
V +LV TPGR++DL + ++ M+V+DEAD++L F S+ ++I LP+ Q L
Sbjct: 123 GVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQFL 182
Query: 298 MFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQKVHCLNTLFSKLQ 356
+FSAT V++ ++ P+ I++ ++ + I+Q+ V++ K L+ L ++ Q
Sbjct: 183 LFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLINEQQ 242
Query: 357 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
+Q++IF + + L ++ + G H+ Q R ++ DF++G + LV T +
Sbjct: 243 WDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVATGV 302
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHRV 445
RGIDI ++ V+N+D P ++ Y+HR+
Sbjct: 303 AARGIDIDQLSRVVNYDLPFPADEYVHRI 331
>DICTYBASE|DDB_G0282741 [details] [associations]
symbol:ddx18 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0282741 GO:GO:0005524
GO:GO:0005730 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 InterPro:IPR025313 Pfam:PF13959
RefSeq:XP_640236.1 ProteinModelPortal:Q54S03 STRING:Q54S03
EnsemblProtists:DDB0234194 GeneID:8623775 KEGG:ddi:DDB_G0282741
KO:K13179 OMA:KDGYRSY Uniprot:Q54S03
Length = 602
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 119/335 (35%), Positives = 182/335 (54%)
Query: 121 EFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 180
EF + ++ I E GF++ +PIQ +SI L G D+L A+ G+GKT AF IPA+E
Sbjct: 120 EFSNLPIEENTKKSIEEMGFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIE 179
Query: 181 KIDQDN----NVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY 236
+ + N N V+I+ PTRELALQ V +EL K+ + GG S K + RL
Sbjct: 180 VLVKSNFKPRNGTGVIIISPTRELALQIYGVARELMKYHTQTHGIVIGGASKKPEEERLE 239
Query: 237 QPVHLLVGTPGRILD--LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANR 294
+ V+LLV TPGR+LD + KG I K+ L++DEAD++L F+ + Q+I+ +P R
Sbjct: 240 KGVNLLVATPGRLLDHLQNTKGF-ITKNLKCLIIDEADRILEVGFEEEMHQIIKKVPKTR 298
Query: 295 QILMFSATFPVTVKDFKDKYLQK-PYVINLMDEL---TLKGITQYYAFVEERQKVHCLNT 350
Q ++FSAT V D L P + + DE T++G+ Q Y ++ L T
Sbjct: 299 QTMLFSATQTRKVDDIAKVSLNNSPVYVGVDDEREISTVEGLEQGYVVCPSERRFLLLYT 358
Query: 351 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRN 410
K + I+F +S N V+ A+ + + +H + Q R F++F N
Sbjct: 359 FLKKNLSKKIIVFLSSCNAVKYTAELLNYIDIPVLELHGRQKQQKRTNTFYEFVNAEKGI 418
Query: 411 LVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
L+CTD+ RG+DI +V+ +I +D P + + Y+HRV
Sbjct: 419 LICTDVAARGLDIPSVDWIIQYDPPDDPKEYIHRV 453
>ZFIN|ZDB-GENE-080721-12 [details] [associations]
symbol:zgc:193690 "zgc:193690" species:7955 "Danio
rerio" [GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-080721-12 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
EMBL:CR846089 IPI:IPI00928637 ProteinModelPortal:F1Q5T4
Ensembl:ENSDART00000134461 ArrayExpress:F1Q5T4 Bgee:F1Q5T4
Uniprot:F1Q5T4
Length = 492
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 118/337 (35%), Positives = 196/337 (58%)
Query: 122 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 179
FE+ LK +LL G++E GF RPS IQE ++P+ L +++A++++GTGKTAAF + L
Sbjct: 86 FEELRLKPQLLKGVYEMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAML 145
Query: 180 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGK-HLNIQVMVTTGGTSLKDDIMRLYQP 238
+D Q + + PT ELALQT +V +++GK + + + G ++ + R+
Sbjct: 146 SHVDPACKWSQCLCISPTYELALQTGKVIEQMGKFYPEVTLAYAVRGHRMERGV-RIKDQ 204
Query: 239 VHLLVGTPGRILDLSKKGVCI-LKDCSMLVMDEADKLLSPE-FQPSVEQLIRFLPANRQI 296
+ ++GTPG +LD K I K + V+DEAD +++ + Q ++ R LP Q+
Sbjct: 205 I--VIGTPGTVLDWCIKLKLIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKGCQM 262
Query: 297 LMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFVEERQ-KVHCLNTLFSK 354
L+FSATF +V F ++ + P +I L +E TL I QYY ++ K + L ++
Sbjct: 263 LLFSATFEDSVWKFAERVVPDPNIIKLKREEETLDTIKQYYVLCNSKEDKFNALCNIYGA 322
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
+ I Q++IFC++ LA ++++ G+ + +M+ + R V FR+G + L+ T
Sbjct: 323 ITIAQAMIFCHTRKMANWLAGQMSKEGHQVALLSGEMVVEQRAAVIERFRDGKEKVLITT 382
Query: 415 DLFTRGIDIQAVNVVINFDFP--KNS----ETYLHRV 445
++ RGID++ V+VVINFD P K+S ETYLHR+
Sbjct: 383 NVCARGIDVEQVSVVINFDLPLDKDSNPDNETYLHRI 419
>ZFIN|ZDB-GENE-021220-2 [details] [associations]
symbol:ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
54" species:7955 "Danio rerio" [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-021220-2 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14808
HOGENOM:HOG000246455 GeneTree:ENSGT00550000075100 CTD:79039
HOVERGEN:HBG051333 OrthoDB:EOG469QTB EMBL:CU929062 EMBL:FP236447
EMBL:AY099535 IPI:IPI00481864 RefSeq:NP_775375.1 UniGene:Dr.18320
STRING:Q8JGR2 Ensembl:ENSDART00000026416 Ensembl:ENSDART00000128587
GeneID:286777 KEGG:dre:286777 NextBio:20806437 Uniprot:Q8JGR2
Length = 862
Score = 489 (177.2 bits), Expect = 6.7e-46, P = 6.7e-46
Identities = 123/379 (32%), Positives = 209/379 (55%)
Query: 76 VDEVEKTVQSEAAVDPSSQDWKARLKIPPADTR--YRTEDVTATKGNEFEDYFLKRELLM 133
V + E T P+S + + +++ DTR R ++ K F+ L +
Sbjct: 35 VKDDENTTVRRLPRFPASSECVSDVEL---DTRELVRAQNKKKKKSGGFQSMGLSYPVYK 91
Query: 134 GIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKID--QDNNVIQV 191
GI +KG++ P+PIQ ++IP+ L G D++A A+ G+GKTAAF +P EK+ Q +
Sbjct: 92 GIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAAFLVPLFEKLKAPQAQTGARA 151
Query: 192 VILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 251
+IL PTRELALQT + KELGK ++ + GG S+ D L++ +++GTPGR++
Sbjct: 152 LILTPTRELALQTMKFTKELGKFTGLRTALILGGDSMDDQFAALHENPDIIIGTPGRLMH 211
Query: 252 LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFK 311
+ ++ L+ +V DEAD+L F ++++IR LP RQ L+FSAT P + +F
Sbjct: 212 VIQEMNLKLQSVEYVVFDEADRLFEMGFAEQLQEIIRRLPDARQTLLFSATLPKLIVEFA 271
Query: 312 DKYLQKPYVINL-MD-ELTLKGITQYYAF-VEERQKV--HCLNTLFSKLQINQSIIFCNS 366
L +P +I L +D +L+ + +++ ++++ + H L + K Q Q+++F +
Sbjct: 272 RAGLTEPVLIRLDVDTKLSEQLKLSFFSLRLDDKPALLLHLLRNVV-KPQ-EQTVVFVAT 329
Query: 367 VNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAV 426
+ VE L + ++ G C I++ + Q R F + L+ TD+ RGIDI +
Sbjct: 330 KHHVEYLKELLSAEGVDCSCIYSALDQTARKISIGRFVHRKVMLLLVTDVAARGIDIPLL 389
Query: 427 NVVINFDFPKNSETYLHRV 445
+ VIN++FP + +LHRV
Sbjct: 390 DNVINYNFPCKPKLFLHRV 408
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 491 (177.9 bits), Expect = 7.5e-46, P = 7.5e-46
Identities = 106/328 (32%), Positives = 184/328 (56%)
Query: 127 LKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDN 186
+ ++L + + G+E+P+PIQ ++IP ++G D++ AK G+GKT AF +P I
Sbjct: 379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR 438
Query: 187 NVIQ-----VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
++ + VI+ PTRELALQ ++ CK+ K L ++V+ GGT + + I L + +
Sbjct: 439 SLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEI 498
Query: 242 LVGTPGRILDL--SKKG-VCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
+V TPGR++D+ + G V L+ + +V+DEAD++ F+P V +++ + +RQ +M
Sbjct: 499 IVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVM 558
Query: 299 FSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQI 357
FSATFP ++ + L KP + + + + Q +EE +K L L Q
Sbjct: 559 FSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQE 618
Query: 358 NQS-IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
+ S IIF + + L K + Y C +H + Q R+ + +DF+NG C+ LV T +
Sbjct: 619 SGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSV 678
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHR 444
RG+D++ + +V+N+ P + E Y+HR
Sbjct: 679 AARGLDVKHLILVVNYSCPNHYEDYVHR 706
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 491 (177.9 bits), Expect = 7.6e-46, P = 7.6e-46
Identities = 106/328 (32%), Positives = 184/328 (56%)
Query: 127 LKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDN 186
+ ++L + + G+E+P+PIQ ++IP ++G D++ AK G+GKT AF +P I
Sbjct: 379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR 438
Query: 187 NVIQ-----VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
++ + VI+ PTRELALQ ++ CK+ K L ++V+ GGT + + I L + +
Sbjct: 439 SLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEI 498
Query: 242 LVGTPGRILDL--SKKG-VCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
+V TPGR++D+ + G V L+ + +V+DEAD++ F+P V +++ + +RQ +M
Sbjct: 499 IVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVM 558
Query: 299 FSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQI 357
FSATFP ++ + L KP + + + + Q +EE +K L L Q
Sbjct: 559 FSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQE 618
Query: 358 NQS-IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
+ S IIF + + L K + Y C +H + Q R+ + +DF+NG C+ LV T +
Sbjct: 619 SGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSV 678
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHR 444
RG+D++ + +V+N+ P + E Y+HR
Sbjct: 679 AARGLDVKHLILVVNYSCPNHYEDYVHR 706
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 491 (177.9 bits), Expect = 7.6e-46, P = 7.6e-46
Identities = 106/328 (32%), Positives = 184/328 (56%)
Query: 127 LKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDN 186
+ ++L + + G+E+P+PIQ ++IP ++G D++ AK G+GKT AF +P I
Sbjct: 379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR 438
Query: 187 NVIQ-----VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
++ + VI+ PTRELALQ ++ CK+ K L ++V+ GGT + + I L + +
Sbjct: 439 SLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEI 498
Query: 242 LVGTPGRILDL--SKKG-VCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
+V TPGR++D+ + G V L+ + +V+DEAD++ F+P V +++ + +RQ +M
Sbjct: 499 IVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVM 558
Query: 299 FSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQI 357
FSATFP ++ + L KP + + + + Q +EE +K L L Q
Sbjct: 559 FSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQE 618
Query: 358 NQS-IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
+ S IIF + + L K + Y C +H + Q R+ + +DF+NG C+ LV T +
Sbjct: 619 SGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSV 678
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHR 444
RG+D++ + +V+N+ P + E Y+HR
Sbjct: 679 AARGLDVKHLILVVNYSCPNHYEDYVHR 706
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 491 (177.9 bits), Expect = 7.6e-46, P = 7.6e-46
Identities = 106/328 (32%), Positives = 184/328 (56%)
Query: 127 LKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDN 186
+ ++L + + G+E+P+PIQ ++IP ++G D++ AK G+GKT AF +P I
Sbjct: 379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR 438
Query: 187 NVIQ-----VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
++ + VI+ PTRELALQ ++ CK+ K L ++V+ GGT + + I L + +
Sbjct: 439 SLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEI 498
Query: 242 LVGTPGRILDL--SKKG-VCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
+V TPGR++D+ + G V L+ + +V+DEAD++ F+P V +++ + +RQ +M
Sbjct: 499 IVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVM 558
Query: 299 FSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQI 357
FSATFP ++ + L KP + + + + Q +EE +K L L Q
Sbjct: 559 FSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQE 618
Query: 358 NQS-IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
+ S IIF + + L K + Y C +H + Q R+ + +DF+NG C+ LV T +
Sbjct: 619 SGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSV 678
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHR 444
RG+D++ + +V+N+ P + E Y+HR
Sbjct: 679 AARGLDVKHLILVVNYSCPNHYEDYVHR 706
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 491 (177.9 bits), Expect = 7.6e-46, P = 7.6e-46
Identities = 106/328 (32%), Positives = 184/328 (56%)
Query: 127 LKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDN 186
+ ++L + + G+E+P+PIQ ++IP ++G D++ AK G+GKT AF +P I
Sbjct: 379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR 438
Query: 187 NVIQ-----VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
++ + VI+ PTRELALQ ++ CK+ K L ++V+ GGT + + I L + +
Sbjct: 439 SLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEI 498
Query: 242 LVGTPGRILDL--SKKG-VCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
+V TPGR++D+ + G V L+ + +V+DEAD++ F+P V +++ + +RQ +M
Sbjct: 499 IVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVM 558
Query: 299 FSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQI 357
FSATFP ++ + L KP + + + + Q +EE +K L L Q
Sbjct: 559 FSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQE 618
Query: 358 NQS-IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
+ S IIF + + L K + Y C +H + Q R+ + +DF+NG C+ LV T +
Sbjct: 619 SGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSV 678
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHR 444
RG+D++ + +V+N+ P + E Y+HR
Sbjct: 679 AARGLDVKHLILVVNYSCPNHYEDYVHR 706
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 491 (177.9 bits), Expect = 7.6e-46, P = 7.6e-46
Identities = 106/328 (32%), Positives = 184/328 (56%)
Query: 127 LKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDN 186
+ ++L + + G+E+P+PIQ ++IP ++G D++ AK G+GKT AF +P I
Sbjct: 379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR 438
Query: 187 NVIQ-----VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
++ + VI+ PTRELALQ ++ CK+ K L ++V+ GGT + + I L + +
Sbjct: 439 SLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEI 498
Query: 242 LVGTPGRILDL--SKKG-VCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
+V TPGR++D+ + G V L+ + +V+DEAD++ F+P V +++ + +RQ +M
Sbjct: 499 IVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVM 558
Query: 299 FSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQI 357
FSATFP ++ + L KP + + + + Q +EE +K L L Q
Sbjct: 559 FSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQE 618
Query: 358 NQS-IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
+ S IIF + + L K + Y C +H + Q R+ + +DF+NG C+ LV T +
Sbjct: 619 SGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSV 678
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHR 444
RG+D++ + +V+N+ P + E Y+HR
Sbjct: 679 AARGLDVKHLILVVNYSCPNHYEDYVHR 706
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 491 (177.9 bits), Expect = 7.6e-46, P = 7.6e-46
Identities = 106/328 (32%), Positives = 184/328 (56%)
Query: 127 LKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDN 186
+ ++L + + G+E+P+PIQ ++IP ++G D++ AK G+GKT AF +P I
Sbjct: 379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR 438
Query: 187 NVIQ-----VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHL 241
++ + VI+ PTRELALQ ++ CK+ K L ++V+ GGT + + I L + +
Sbjct: 439 SLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEI 498
Query: 242 LVGTPGRILDL--SKKG-VCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILM 298
+V TPGR++D+ + G V L+ + +V+DEAD++ F+P V +++ + +RQ +M
Sbjct: 499 IVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVM 558
Query: 299 FSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQI 357
FSATFP ++ + L KP + + + + Q +EE +K L L Q
Sbjct: 559 FSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQE 618
Query: 358 NQS-IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 416
+ S IIF + + L K + Y C +H + Q R+ + +DF+NG C+ LV T +
Sbjct: 619 SGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSV 678
Query: 417 FTRGIDIQAVNVVINFDFPKNSETYLHR 444
RG+D++ + +V+N+ P + E Y+HR
Sbjct: 679 AARGLDVKHLILVVNYSCPNHYEDYVHR 706
>GENEDB_PFALCIPARUM|PFF1500c [details] [associations]
symbol:PFF1500c "DEAD/DEAH box ATP-dependent RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0016070 "RNA metabolic process" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AL844505 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
RefSeq:XP_966291.1 ProteinModelPortal:C6KTE4
EnsemblProtists:PFF1500c:mRNA GeneID:3885813 KEGG:pfa:PFF1500c
EuPathDB:PlasmoDB:PF3D7_0630900 ProtClustDB:CLSZ2514457
Uniprot:C6KTE4
Length = 601
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 114/331 (34%), Positives = 179/331 (54%)
Query: 121 EFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 180
+FE+ + L G+ E F + IQ + IP L+G DIL AK G+GKT AF +P++
Sbjct: 149 KFEELNICDALKKGLKELNFVTLTEIQAKCIPHFLSGKDILGAAKTGSGKTLAFLVPSIN 208
Query: 181 KIDQ----DNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY 236
+ N V+I+ PTREL LQ QVCK+L K++ + GG S ++ +
Sbjct: 209 ILYNIKFLPKNGTGVLIISPTRELCLQIYQVCKDLCKYIPQTNGIIIGGMSRNEEKKKFI 268
Query: 237 QPVHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQ 295
+++L+ TPGR+LD + I K+ L++DEAD+LL F+ + +I+ LP RQ
Sbjct: 269 HGINILIATPGRLLDHMQNTKEFIYKNLICLIIDEADRLLQIGFEEEINLIIKRLPKKRQ 328
Query: 296 ILMFSATFPVTVKDFKDKYLQKPYVINLMDEL-TLKGITQYYAFVEERQKVHCLNTLFSK 354
+FSAT V+ LQKP I + ++ T++ + Q YA V+E ++ L T K
Sbjct: 329 TALFSATQTTKVESLIRLSLQKPIFIEVTTKIATVERLQQGYALVDEDKRFLLLFTFLKK 388
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
+ ++F N+ V+ + + + IH K Q+ R + FHDF C L+CT
Sbjct: 389 NMSKKIMVFFNNCMSVQFYNDLLNYIDIPTYCIHGKKKQNKRLKSFHDFSAAKCAILLCT 448
Query: 415 DLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
++ RG+DI VN +I +D P +S+ Y+HRV
Sbjct: 449 NVAARGLDIPNVNYIIQYDPPDDSKEYIHRV 479
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 107/321 (33%), Positives = 181/321 (56%)
Query: 135 IFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQ---- 190
+ ++ F P+PIQ + P+AL+G D++ A+ G+GKT A+ +PA+ I+ + +
Sbjct: 105 LMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGP 164
Query: 191 -VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI 249
++L PTRELA Q QV + GK ++ GG I L + V + + TPGR+
Sbjct: 165 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 224
Query: 250 LDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKD 309
+D + G L+ C+ LV+DEAD++L F+P + +++ + +RQ LM+SAT+P V+
Sbjct: 225 IDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQ 284
Query: 310 FKDKYLQKPYVINLMD-ELTLK-GITQYYAFVEERQKVHCLNTLFSKLQI---NQSIIFC 364
+ +LQ IN+ + EL+ I Q E +K H L L ++ N++IIF
Sbjct: 285 LAEDFLQDYVQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFV 344
Query: 365 NSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQ 424
+ R + L +++ G+ IH Q R+ V ++FR+G L+ TD+ +RG+D++
Sbjct: 345 ETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVE 404
Query: 425 AVNVVINFDFPKNSETYLHRV 445
V VIN+D+P +SE Y+HR+
Sbjct: 405 DVKFVINYDYPNSSEDYVHRI 425
>UNIPROTKB|C6KTE4 [details] [associations]
symbol:PFF1500c "DEAD/DEAH box ATP-dependent RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 EMBL:AL844505 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY RefSeq:XP_966291.1
ProteinModelPortal:C6KTE4 EnsemblProtists:PFF1500c:mRNA
GeneID:3885813 KEGG:pfa:PFF1500c EuPathDB:PlasmoDB:PF3D7_0630900
ProtClustDB:CLSZ2514457 Uniprot:C6KTE4
Length = 601
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 114/331 (34%), Positives = 179/331 (54%)
Query: 121 EFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 180
+FE+ + L G+ E F + IQ + IP L+G DIL AK G+GKT AF +P++
Sbjct: 149 KFEELNICDALKKGLKELNFVTLTEIQAKCIPHFLSGKDILGAAKTGSGKTLAFLVPSIN 208
Query: 181 KIDQ----DNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY 236
+ N V+I+ PTREL LQ QVCK+L K++ + GG S ++ +
Sbjct: 209 ILYNIKFLPKNGTGVLIISPTRELCLQIYQVCKDLCKYIPQTNGIIIGGMSRNEEKKKFI 268
Query: 237 QPVHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQ 295
+++L+ TPGR+LD + I K+ L++DEAD+LL F+ + +I+ LP RQ
Sbjct: 269 HGINILIATPGRLLDHMQNTKEFIYKNLICLIIDEADRLLQIGFEEEINLIIKRLPKKRQ 328
Query: 296 ILMFSATFPVTVKDFKDKYLQKPYVINLMDEL-TLKGITQYYAFVEERQKVHCLNTLFSK 354
+FSAT V+ LQKP I + ++ T++ + Q YA V+E ++ L T K
Sbjct: 329 TALFSATQTTKVESLIRLSLQKPIFIEVTTKIATVERLQQGYALVDEDKRFLLLFTFLKK 388
Query: 355 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 414
+ ++F N+ V+ + + + IH K Q+ R + FHDF C L+CT
Sbjct: 389 NMSKKIMVFFNNCMSVQFYNDLLNYIDIPTYCIHGKKKQNKRLKSFHDFSAAKCAILLCT 448
Query: 415 DLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
++ RG+DI VN +I +D P +S+ Y+HRV
Sbjct: 449 NVAARGLDIPNVNYIIQYDPPDDSKEYIHRV 479
>UNIPROTKB|Q4K4K3 [details] [associations]
symbol:dbpA "ATP-independent RNA helicase DbpA"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 OMA:THEKSTI RefSeq:YP_262830.1
ProteinModelPortal:Q4K4K3 STRING:Q4K4K3 GeneID:3480144
KEGG:pfl:PFL_5772 PATRIC:19881049
BioCyc:PFLU220664:GIX8-5812-MONOMER Uniprot:Q4K4K3
Length = 461
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 108/330 (32%), Positives = 177/330 (53%)
Query: 117 TKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCI 176
T F L +L + G+ + +PIQ +S+P+ L G D++A+AK G+GKTAAF I
Sbjct: 3 TIATAFNTLPLSPAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGI 62
Query: 177 PALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGK-HLNIQVMVTTGGTSLKDDIMRL 235
L I+ Q +++ PTRELA Q ++ + L + NI+V+ GG S I L
Sbjct: 63 GLLNPINPRYFGCQALVICPTRELADQVAKEVRRLARAEDNIKVLTLCGGVSFGPQIASL 122
Query: 236 YQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQ 295
H++VGTPGRI +KG +L + LV+DEAD++L F ++E +I P+ RQ
Sbjct: 123 EHGAHIIVGTPGRIQQHLRKGSLVLDGLNTLVLDEADRMLDMGFYDAIEDIIEKTPSRRQ 182
Query: 296 ILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKL 355
L+FSAT+PV +K K+++ P + I Q + + +++ + +
Sbjct: 183 TLLFSATYPVGIKQLASKFMRDPQTVKAEAFHDDTQIEQRFYEISPEERMSAVTKVLHHF 242
Query: 356 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 415
+ + FC + +V+ +T G S +H + Q R++V F N + LV TD
Sbjct: 243 RPASCVAFCFTKQQVQETVDHLTAKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVATD 302
Query: 416 LFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
+ RG+DI A+++VIN + ++SE ++HRV
Sbjct: 303 VAARGLDIDALDMVINVELARDSEIHIHRV 332
>MGI|MGI:1919240 [details] [associations]
symbol:Ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 54"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005102 "receptor binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006396 "RNA processing" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016070 "RNA metabolic process" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1919240 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 GO:GO:0006396
GO:GO:0030331 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14808 HOGENOM:HOG000246455 OMA:FYIPYRP
GeneTree:ENSGT00550000075100 CTD:79039 HOVERGEN:HBG051333
EMBL:AF319547 EMBL:BC043699 IPI:IPI00875042 RefSeq:NP_082317.1
UniGene:Mm.24495 ProteinModelPortal:Q8K4L0 SMR:Q8K4L0 STRING:Q8K4L0
PhosphoSite:Q8K4L0 PaxDb:Q8K4L0 PRIDE:Q8K4L0
Ensembl:ENSMUST00000031598 GeneID:71990 KEGG:mmu:71990
UCSC:uc008zhq.1 NextBio:335150 Bgee:Q8K4L0 CleanEx:MM_DDX54
Genevestigator:Q8K4L0 Uniprot:Q8K4L0
Length = 874
Score = 488 (176.8 bits), Expect = 9.1e-46, P = 9.1e-46
Identities = 111/347 (31%), Positives = 186/347 (53%)
Query: 106 DTR--YRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILAR 163
DTR R ++ K F+ L + GI +KG++ P+PIQ ++IP+ L G D++A
Sbjct: 79 DTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAM 138
Query: 164 AKNGTGKTAAFCIPALEKIDQDN--NVIQVVILVPTRELALQTSQVCKELGKHLNIQVMV 221
A+ G+GKTA F +P E++ + + +IL PTRELALQT + KELGK ++ +
Sbjct: 139 ARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKFTGLKTAL 198
Query: 222 TTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQP 281
GG ++D L++ +++ TPGR++ ++ + L+ +V DEAD+L F
Sbjct: 199 ILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQSVEYVVFDEADRLFEMGFAE 258
Query: 282 SVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL-MDELTLKGITQYYAFVE 340
++++I LP Q ++FSAT P + +F L +P +I L +D + + + V
Sbjct: 259 QLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLNEQLKTSFLLVR 318
Query: 341 ERQKVHCLNTLFSKL--QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNR 398
E K L L + +Q+++F + + E L + + G SC +I++ + Q R
Sbjct: 319 EDTKAAVLLYLLQNVVRPQDQTVVFVATKHHAEYLTELLMGQGVSCAHIYSALDQTARKI 378
Query: 399 VFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
F + C L+ TDL RG+DI ++ VIN+ FP + +LHRV
Sbjct: 379 NLAKFTHNKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRV 425
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 461 (167.3 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 107/324 (33%), Positives = 176/324 (54%)
Query: 131 LLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKID------Q 184
L+ I GF P+PIQ ++ PIAL G DI+ AK G+GKT AF +P++ I+ +
Sbjct: 395 LMKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSIVHINAQPVLRE 454
Query: 185 DNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVG 244
D+ I V++L PTRELALQ + + G I GG S + L + V +++
Sbjct: 455 DDGPI-VLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVAALKKGVEIVIA 513
Query: 245 TPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFP 304
TPGR++D+ + G L+ + LV+DEAD++L F+P + ++I + +RQ LMFSAT+P
Sbjct: 514 TPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMFSATWP 573
Query: 305 VTVKDFKDKYLQKPYVINL-MDELTLK-GITQYYAFVEE-RQKVHCLNTLFSKLQINQSI 361
V+ +L +++ E+T + Q ++ +K L+ L S + + I
Sbjct: 574 KEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDFEKKERMLSFLGSVGRDEKVI 633
Query: 362 IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI 421
+F + V+ L + + G+ IH Q R+ V F+NG ++ TD+ +RG+
Sbjct: 634 VFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIATDVASRGL 693
Query: 422 DIQAVNVVINFDFPKNSETYLHRV 445
DI+ + V+N+DFP E Y+HR+
Sbjct: 694 DIKDIKYVVNYDFPNTIEVYIHRI 717
Score = 48 (22.0 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 21/110 (19%), Positives = 33/110 (30%)
Query: 11 GIGSGRGGVNASNPSFQSSRPQQQYVQRNFLQNHYHNXXXXXXXXXXXXXXWLRRNNFPG 70
G G N+S+ + SS Y N N Y+N NN
Sbjct: 114 GYNGSSNGYNSSSNGYNSSNSSSSYGASN---NGYNNSSGSSSSGSSGSSNGGSYNNSGS 170
Query: 71 ADSSIVDEVEKTVQ-SEAAVDPSSQ--DWKARLKIPPADTRYRTEDVTAT 117
++S+ + S P++ + PP T + T T
Sbjct: 171 SNSNGYSKPTSNYSYSNGYTGPTTNYSSYSNGYSTPPTSTSTSSSSTTTT 220
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 104/332 (31%), Positives = 178/332 (53%)
Query: 120 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 179
++F+ L +L + + G+ P+PIQE++IP+ + G DI+ A+ GTGKT AF P L
Sbjct: 7 SDFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPIL 66
Query: 180 EKIDQDNNVI-----QVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMR 234
+++ ++ + +V++L PTRELA Q + G LN++V++ GG + I +
Sbjct: 67 DRLSRNASPAPVRGTRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGGQIRQ 126
Query: 235 LYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANR 294
L + H+LV TPGR++DL ++ L L++DEAD++L F ++ + + +P+ R
Sbjct: 127 LERGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAKNVPSKR 186
Query: 295 QILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKG-ITQYYAFVEERQKVHCLNTLFS 353
Q L FSAT P V+ +L+ P +++ T G I Q FVE+ +K L
Sbjct: 187 QTLFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQPEKASLLIEKIR 246
Query: 354 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 413
++ +I+F + + + + K++ + IH Q R + F+ G LV
Sbjct: 247 DPELRSAIVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVPILVA 306
Query: 414 TDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
TD+ RGI + A+ VIN+D P E ++HR+
Sbjct: 307 TDIAARGIHVDALTHVINYDLPDVPEQFVHRI 338
>POMBASE|SPAC30D11.03 [details] [associations]
symbol:ddx27 "ATP-dependent RNA helicase Ddx27/Drs1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC30D11.03 GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000265456 KO:K13181 OrthoDB:EOG4B01XM PIR:S62561
RefSeq:NP_593214.1 ProteinModelPortal:Q09903 STRING:Q09903
EnsemblFungi:SPAC30D11.03.1 GeneID:2543155 KEGG:spo:SPAC30D11.03
NextBio:20804181 Uniprot:Q09903
Length = 754
Score = 483 (175.1 bits), Expect = 1.4e-45, P = 1.4e-45
Identities = 118/345 (34%), Positives = 190/345 (55%)
Query: 110 RTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTG 169
+ + + T + F+ L R +L G+ GFE P+ IQ+++IP+AL G DI+ A G+G
Sbjct: 249 KEKSMMTTTHSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSG 308
Query: 170 KTAAFCIPALEKI-DQDNNV--IQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGT 226
KTAAF +P LE++ + V +V+IL PTRELA+Q V ++ +I V + GG
Sbjct: 309 KTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGL 368
Query: 227 SLKDDIMRLYQPVHLLVGTPGRILD--LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVE 284
SLK L + +++ TPGR +D + +G + ++ ++VMDEAD++L F +
Sbjct: 369 SLKLQEQELRKRPDIVIATPGRFIDHMRNSQGFTV-ENIEIMVMDEADRMLEDGFADELN 427
Query: 285 QLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQ 343
++I+ P +RQ ++FSAT V D L +P + + ++ T K +TQ + V ++
Sbjct: 428 EIIQACPKSRQTMLFSATMTDKVDDLIRLSLNRPVRVFVDNKKTTAKLLTQEFVRVRPQR 487
Query: 344 KV---HCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVF 400
++ L L +L ++IIF S + L + IH + Q+ R R
Sbjct: 488 ELLRPAMLIYLCKELFHRRTIIFFRSKAFAHKMRVIFGLLSLNATEIHGSLSQEQRVRAL 547
Query: 401 HDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
DFR+G C L+ TD+ +RGIDI+ + VVIN++ P E YLHRV
Sbjct: 548 EDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAPATHEVYLHRV 592
>UNIPROTKB|A4QYM6 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
EMBL:CM001233 GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K13181 RefSeq:XP_003712922.1
ProteinModelPortal:A4QYM6 STRING:A4QYM6 GeneID:2683645
KEGG:mgr:MGG_07718 OrthoDB:EOG4B01XM Uniprot:A4QYM6
Length = 790
Score = 484 (175.4 bits), Expect = 1.5e-45, P = 1.5e-45
Identities = 130/385 (33%), Positives = 205/385 (53%)
Query: 73 SSIVDEVEKTVQSEAAVDPSSQDWKARLKIPPADTRYRTEDVTATKGN-EFEDYFLKREL 131
+S V + +SE+ D ++ A++K A +++ KGN F+ L R +
Sbjct: 211 ASPVPHPDDDQESESEQDEDEEE-AAKMKEFFAADEPKSD---TNKGNASFQSMSLSRPI 266
Query: 132 LMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVI-- 189
L G+ GF +P+PIQ ++IPIAL G D++ A G+GKTAAF +P LE++ +
Sbjct: 267 LRGLTSVGFAKPTPIQSKTIPIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPT 326
Query: 190 -QVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGR 248
+VVIL PTRELA+Q V +L H +I+ + GG SLK L +++ TPGR
Sbjct: 327 SRVVILAPTRELAIQCHAVATKLASHTDIKFCLAVGGLSLKVQESELRLRPDVIIATPGR 386
Query: 249 ILDLSKKGVCILKDC-SMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTV 307
+D + D +LV+DEAD++L F + +++ LP +RQ ++FSAT +V
Sbjct: 387 FIDHMRNSASFAVDTVEILVLDEADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSSV 446
Query: 308 KDFKDKYLQKPYVINLM---DELTLKGITQYYAFVE---ERQKVHCLNTLFSKLQINQSI 361
+ L KP + LM + T+ +TQ + + E +++ L L L + I
Sbjct: 447 DNLIRVGLNKP--VRLMVDSQKKTVVTLTQEFVRLRPGREEKRMGYLVYLCKNLYTERVI 504
Query: 362 IFCNSVNRVELLAKKITEL-GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 420
IF ++ A+ I L G SC +H M Q R + FR+G L+ TDL +RG
Sbjct: 505 IFFRQ-KKIAHHARIIFGLLGLSCAELHGSMSQIQRIQSVEAFRDGKVSFLLATDLASRG 563
Query: 421 IDIQAVNVVINFDFPKNSETYLHRV 445
+DI+ V+ VIN++ P++ E Y+HRV
Sbjct: 564 LDIKGVDTVINYEAPQSLEIYVHRV 588
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 105/332 (31%), Positives = 179/332 (53%)
Query: 120 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 179
+EF+ + L ++ + KG+++P+PIQ+E IP + G+D+L A+ GTGKTAAF +P +
Sbjct: 2 SEFKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPII 61
Query: 180 EKIDQDNNVIQV-----VILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMR 234
K ++ I+ +IL PTRELA Q Q + L ++ V GG + +
Sbjct: 62 NKFGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDS 121
Query: 235 LYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANR 294
+ + +LV TPGR+LDL + G K + V+DEAD +L F V+ +I LP +R
Sbjct: 122 IELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSR 181
Query: 295 QILMFSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFS 353
Q L+FSAT P ++ + L P I + E +T+ + Q +++ KV L + +
Sbjct: 182 QTLLFSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQSVYHLDKSNKVPLLFNILT 241
Query: 354 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 413
K + +IFC + +++ K + + + +H+ Q R +F++ R LV
Sbjct: 242 KADYEKVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFKDSTLRVLVA 301
Query: 414 TDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 445
TD+ RGID+ + +VIN++ P++ Y+HR+
Sbjct: 302 TDVAARGIDVDNITLVINYNLPEDPRNYIHRI 333
WARNING: HSPs involving 680 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 485 471 0.00099 118 3 11 22 0.50 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 930
No. of states in DFA: 609 (65 KB)
Total size of DFA: 280 KB (2148 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 44.22u 0.12s 44.34t Elapsed: 00:00:02
Total cpu time: 44.27u 0.12s 44.39t Elapsed: 00:00:02
Start: Fri May 10 13:33:56 2013 End: Fri May 10 13:33:58 2013
WARNINGS ISSUED: 2