BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011463
(485 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/470 (65%), Positives = 386/470 (82%), Gaps = 1/470 (0%)
Query: 1 MGVKTM-FKWSTKITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISK 59
MG K M FKWS IT +QV++L+RAEKDV K++ +FDSATAEYANG+ HD S+F M+ +
Sbjct: 1 MGSKVMMFKWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLR 60
Query: 60 LVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPT 119
LVSAN+F+ AEDL+ R+ E C ++EDI LSICRGYGRVHRP D++RVF KMK+F C+P+
Sbjct: 61 LVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPS 120
Query: 120 PKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIF 179
K+Y+TVLAILVEENQL LAF+FY++MREIG+ P VASLNVLIKALC+N GT+DA KIF
Sbjct: 121 QKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIF 180
Query: 180 REMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQS 239
EMP RGC PDSYTYGTLI+GLCR G+I EAK+LF EM K C+PTVVTYTSLINGLC S
Sbjct: 181 LEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGS 240
Query: 240 KSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTY 299
K+V+EAMR EEM+SKG+EPNVFTYSSLMDGLCK G S QAMEL +MM+++ RPN+VTY
Sbjct: 241 KNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTY 300
Query: 300 STLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVL 359
+TL+ GLCKE K+QEAVE+LDRM LQGLKPDAGLYGK+IS FC I K++EAANFLDEM+L
Sbjct: 301 TTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMIL 360
Query: 360 GGITPNRLTWSLHIRIHNTVVQGLCKTDPNRAFQVYLSMRNRSISVDSLTYSSLITCFCK 419
GGITPNRLTW++H++ N VV+GLC P+RAF +YLSMR+R ISV+ T SL+ C CK
Sbjct: 361 GGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCK 420
Query: 420 KGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLEL 469
KG+ K+ ++VDE+V DGC+P +GTW ++ D+ + +A++ LL +L
Sbjct: 421 KGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLLRDL 470
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/290 (19%), Positives = 118/290 (40%), Gaps = 44/290 (15%)
Query: 186 GCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEA 245
G D ++G ++ L K A++L M+ + C + S+ G + ++
Sbjct: 46 GYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDS 105
Query: 246 MRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNG 305
+R+F +M+ +P+ Y +++ L + + A + + M P + + + L+
Sbjct: 106 LRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKA 165
Query: 306 LCK-EGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITP 364
LC+ +G + ++I M +G PD+ YG
Sbjct: 166 LCRNDGTVDAGLKIFLEMPKRGCDPDSYTYG----------------------------- 196
Query: 365 NRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDI 423
T++ GLC+ + A +++ M + + +TY+SLI C ++
Sbjct: 197 -------------TLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNV 243
Query: 424 HKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELMNKC 473
++ R ++E+ G P+ T+S++M L + QA EL + + C
Sbjct: 244 DEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGC 293
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 250 bits (639), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/423 (35%), Positives = 233/423 (55%), Gaps = 10/423 (2%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G + D STF+++I L A+Q RPA +L+ + E F ++ +GY A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHM-REIGIQPCVASLNVLIK 163
+R+ ++M EFGC + S ++ +E +++ A F + M + G P + N L+
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 164 ALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACS 223
LCK +G + A +I M G PD YTY ++I+GLC+LG++ EA E+ +M T+ CS
Sbjct: 304 GLCK-AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 224 PTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMEL 283
P VTY +LI+ LC+ VEEA L + SKG+ P+V T++SL+ GLC AMEL
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 284 LQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCD 343
+ M SK P+ TY+ L++ LC +GKL EA+ +L +M+L G Y +I FC
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 344 IGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRS 402
K +EA DEM + G++ N +T+ NT++ GLCK+ A Q+ M
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTY-------NTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 403 ISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAA 462
D TY+SL+T FC+ GDI K+A IV + +GC PD T+ +++ L ++ A+
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Query: 463 ELL 465
+LL
Sbjct: 596 KLL 598
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 247/455 (54%), Gaps = 13/455 (2%)
Query: 14 TSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLL 73
T ++L +R++ D + AL +F+ A+ + F + + + ++ +L + F + +L
Sbjct: 49 TDVKLLDSLRSQPDDSAALRLFNLASKK--PNFSPEPALYEEILLRLGRSGSFDDMKKIL 106
Query: 74 DRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKM-KEFGCEPTPKSYITVLAILVE 132
+ + +C++ FL + Y + + + V D M EFG +P Y +L +LV+
Sbjct: 107 EDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVD 166
Query: 133 ENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSY 192
N LKL + M GI+P V++ NVLIKALC+ + + A + +MP+ G PD
Sbjct: 167 GNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCR-AHQLRPAILMLEDMPSYGLVPDEK 225
Query: 193 TYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEM 252
T+ T++ G G + A + ++M CS + V+ +++G C+ VE+A+ +EM
Sbjct: 226 TFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM 285
Query: 253 RSK-GVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGK 311
++ G P+ +T+++L++GLCK G A+E++ +M+ + + P++ TY+++++GLCK G+
Sbjct: 286 SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE 345
Query: 312 LQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSL 371
++EAVE+LD+M + P+ Y +IS C + +EA + GI P+ T+
Sbjct: 346 VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF-- 403
Query: 372 HIRIHNTVVQGLCKTDPNR-AFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIV 430
N+++QGLC T +R A +++ MR++ D TY+ LI C KG + ++ ++
Sbjct: 404 -----NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458
Query: 431 DELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
++ L GC T++ ++ K R+A E+
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIF 493
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/401 (31%), Positives = 211/401 (52%), Gaps = 11/401 (2%)
Query: 44 NGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLD 103
+GF D TF+ +++ L A + A +++D + +E D + S+ G ++ +
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348
Query: 104 AMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIK 163
A+ V D+M C P +Y T+++ L +ENQ++ A R + GI P V + N LI+
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408
Query: 164 ALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACS 223
LC + A ++F EM ++GC PD +TY LI+ LC GK+ EA + K+ME C+
Sbjct: 409 GLCL-TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 224 PTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMEL 283
+V+TY +LI+G C++ EA +F+EM GV N TY++L+DGLCK A +L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 284 LQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCD 343
+ MI + +P+ TY++LL C+ G +++A +I+ M G +PD YG +IS C
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 344 IGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLC-KTDPNRAFQVYLSM-RNR 401
G+ + A+ L + + GI +L +N V+QGL K A ++ M
Sbjct: 588 AGRVEVASKLLRSIQMKGI-------NLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQN 640
Query: 402 SISVDSLTYSSLITCFCKKGD-IHKSARIVDELVLDGCLPD 441
D+++Y + C G I ++ + EL+ G +P+
Sbjct: 641 EAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 122/271 (45%), Gaps = 7/271 (2%)
Query: 52 TFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKM 111
T++ +I AN+ R AE++ D + + ++ G + R DA ++ D+M
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 112 KEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGT 171
G +P +Y ++L +K A + M G +P + + LI LCK +G
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK-AGR 590
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEM-ETKACSPTVVTYT 230
++ A K+ R + +G + Y +I GL R K EA LF+EM E P V+Y
Sbjct: 591 VEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYR 650
Query: 231 SLINGLCQSKS-VEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMIS 289
+ GLC + EA+ E+ KG P + L +GL ++L+ M++
Sbjct: 651 IVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQ 710
Query: 290 K-RHRPNIVTYSTLLNGLCKEGKLQEAVEIL 319
K R V +++ GL K K Q+A+ L
Sbjct: 711 KARFSEEEV---SMVKGLLKIRKFQDALATL 738
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 238 bits (608), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 231/429 (53%), Gaps = 14/429 (3%)
Query: 39 TAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRV 98
+A F+ +ST S MI ++ F E LL R+ E I E F+ + R YG+
Sbjct: 66 SAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKA 125
Query: 99 HRPLDAMRVFDKM-KEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHM----REIGIQP 153
H P A+ +F +M EF C+ + KS+ +VL +++ E FY ++ + I P
Sbjct: 126 HLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISP 185
Query: 154 CVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKEL 213
S N++IKALCK +D A ++FR MP R C PD YTY TL++GLC+ +I EA L
Sbjct: 186 NGLSFNLVIKALCKLR-FVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 214 FKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCK 273
EM+++ CSP+ V Y LI+GLC+ + +L + M KG PN TY++L+ GLC
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304
Query: 274 GGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGL 333
G +A+ LL+ M+S + PN VTY TL+NGL K+ + +AV +L M+ +G + +
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364
Query: 334 YGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKT-DPNRAF 392
Y +IS GK +EA + +M G PN I +++ +V GLC+ PN A
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPN-------IVVYSVLVDGLCREGKPNEAK 417
Query: 393 QVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTAL 452
++ M ++ TYSSL+ F K G ++ ++ E+ GC ++ +S ++ L
Sbjct: 418 EILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGL 477
Query: 453 WDRRKMRQA 461
++++A
Sbjct: 478 CGVGRVKEA 486
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 196/405 (48%), Gaps = 37/405 (9%)
Query: 104 AMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIK 163
A+ VF M E C P +Y T++ L +E ++ A M+ G P NVLI
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265
Query: 164 ALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACS 223
LCK G + K+ M +GC P+ TY TLI+GLC GK+ +A L + M + C
Sbjct: 266 GLCKK-GDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI 324
Query: 224 PTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMEL 283
P VTY +LINGL + + +A+RL M +G N YS L+ GL K G + +AM L
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 284 LQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCD 343
+ M K +PNIV YS L++GLC+EGK EA EIL+RM G P+A Y ++ F
Sbjct: 385 WRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444
Query: 344 IGKYQEAANFLDEMVLGGITPNR--------------------LTWSLHIRI-------- 375
G +EA EM G + N+ + WS + I
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVA 504
Query: 376 HNTVVQGLCKTDP-NRAFQVYLSM---RNRSISVDSLTYSSLITCFCKKGDIHKSARIVD 431
++++++GLC + A ++Y M D +TY+ L+ C + DI ++ +++
Sbjct: 505 YSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLN 564
Query: 432 ELVLDGCLPDEGTWSAVMTALWDRR----KMRQAAELLLLELMNK 472
++ GC PD T + + L ++ K R E L++ L+ +
Sbjct: 565 SMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKR 609
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 116/258 (44%), Gaps = 15/258 (5%)
Query: 228 TYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMM 287
T +S+I S + +L +R + ++ + K +A++L M
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138
Query: 288 ISK-RHRPNIVTYSTLLNGLCKEGKLQEAVEILD-----RMKLQGLKPDAGLYGKIISCF 341
+ + R + ++ +++++LN + EG +E D M + + P+ + +I
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN-ISPNGLSFNLVIKAL 197
Query: 342 CDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRN 400
C + A M P+ T+ T++ GLCK + + A + M++
Sbjct: 198 CKLRFVDRAIEVFRGMPERKCLPDGYTYC-------TLMDGLCKEERIDEAVLLLDEMQS 250
Query: 401 RSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQ 460
S + Y+ LI CKKGD+ + ++VD + L GC+P+E T++ ++ L + K+ +
Sbjct: 251 EGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 310
Query: 461 AAELLLLELMNKCVEAEV 478
A LL + +KC+ +V
Sbjct: 311 AVSLLERMVSSKCIPNDV 328
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 236 bits (602), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 142/466 (30%), Positives = 244/466 (52%), Gaps = 18/466 (3%)
Query: 11 TKITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAE 70
+I V++ +R E V AL F S +N F+H TF +MI KL Q +
Sbjct: 39 AEIKELDVVKRLRQESCVPLALHFFKSIAN--SNLFKHTPLTFEVMIRKLAMDGQVDSVQ 96
Query: 71 DLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAIL 130
LL ++ + +ED+F+S+ Y +V A+ +F ++KEFGC+P+ K Y VL L
Sbjct: 97 YLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTL 156
Query: 131 VEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPD 190
+ EN++++ + YR M+ G +P V + NVL+KALCKN+ +D A K+ EM N+GC PD
Sbjct: 157 LGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNN-KVDGAKKLLVEMSNKGCCPD 215
Query: 191 SYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFE 250
+ +Y T+I+ +C +G + E +EL + E P V Y +LINGLC+ + A L
Sbjct: 216 AVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNALINGLCKEHDYKGAFELMR 270
Query: 251 EMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEG 310
EM KG+ PNV +YS+L++ LC G A L M+ + PNI T S+L+ G G
Sbjct: 271 EMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRG 330
Query: 311 KLQEAVEILDRM-KLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTW 369
+A+++ ++M + GL+P+ Y ++ FC G +A + M G +PN
Sbjct: 331 TTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPN---- 386
Query: 370 SLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSAR 428
IR + +++ G K + A ++ M + + Y++++ C+ ++
Sbjct: 387 ---IRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAES 443
Query: 429 IVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL-LLELMNKC 473
+++ + + C P T++A + L D ++ A ++ +E ++C
Sbjct: 444 LIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRC 489
Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 203/443 (45%), Gaps = 55/443 (12%)
Query: 49 DNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVF 108
D +++ +IS + + +L +R + ++ ++ G + H A +
Sbjct: 215 DAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALINGLCKEHDYKGAFELM 269
Query: 109 DKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHM---------------------- 146
+M E G P SY T++ +L Q++LAF F M
Sbjct: 270 REMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLR 329
Query: 147 --------------REIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSY 192
R G+QP V + N L++ C + G + A +F M GC+P+
Sbjct: 330 GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSH-GNIVKAVSVFSHMEEIGCSPNIR 388
Query: 193 TYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEM 252
TYG+LING + G + A ++ +M T C P VV YT+++ LC+ +EA L E M
Sbjct: 389 TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448
Query: 253 RSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHR--PNIVTYSTLLNGLCKEG 310
+ P+V T+++ + GLC G A ++ + M ++HR PNIVTY+ LL+GL K
Sbjct: 449 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM-EQQHRCPPNIVTYNELLDGLAKAN 507
Query: 311 KLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWS 370
+++EA + + ++G++ + Y ++ C+ G A + +M++ G +P+ +T
Sbjct: 508 RIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITM- 566
Query: 371 LHIRIHNTVVQGLCKT-DPNRAFQVY--LSMRNRSISVDSLTYSSLITCFCKKGDIHKSA 427
N ++ CK RA Q+ +S R D ++Y+++I C+
Sbjct: 567 ------NMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGV 620
Query: 428 RIVDELVLDGCLPDEGTWSAVMT 450
+++ ++ G +P TWS ++
Sbjct: 621 ILLERMISAGIVPSIATWSVLIN 643
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 178/369 (48%), Gaps = 9/369 (2%)
Query: 52 TFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKM 111
++S +I+ L ++ Q A L ++ K C S+ +G DA+ ++++M
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342
Query: 112 -KEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSG 170
+ FG +P +Y T++ + A + HM EIG P + + LI K G
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKR-G 401
Query: 171 TMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYT 230
++D A I+ +M GC P+ Y ++ LCR K EA+ L + M + C+P+V T+
Sbjct: 402 SLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFN 461
Query: 231 SLINGLCQSKSVEEAMRLFEEMRSKG-VEPNVFTYSSLMDGLCKGGCSSQAMELLQMMIS 289
+ I GLC + ++ A ++F +M + PN+ TY+ L+DGL K +A L + +
Sbjct: 462 AFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFM 521
Query: 290 KRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQE 349
+ + TY+TLL+G C G A++++ +M + G PD II +C GK +
Sbjct: 522 RGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAER 581
Query: 350 AANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPNRAFQVYLS-MRNRSISVDSL 408
AA LD + G R W + + V+ GLC+++ + L M + I
Sbjct: 582 AAQMLDLVSCG-----RRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIA 636
Query: 409 TYSSLITCF 417
T+S LI CF
Sbjct: 637 TWSVLINCF 645
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 234 bits (596), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/376 (33%), Positives = 212/376 (56%), Gaps = 9/376 (2%)
Query: 104 AMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIK 163
A+ +FDKM+ GC P +Y T++ + ++ F+ R M G++P + S NV+I
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 164 ALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACS 223
LC+ + +F + EM RG + D TY TLI G C+ G ++A + EM +
Sbjct: 284 GLCREGRMKEVSF-VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT 342
Query: 224 PTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMEL 283
P+V+TYTSLI+ +C++ ++ AM ++MR +G+ PN TY++L+DG + G ++A +
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 284 LQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCD 343
L+ M P++VTY+ L+NG C GK+++A+ +L+ MK +GL PD Y ++S FC
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 344 IGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPNR-AFQVYLSMRNRS 402
EA EMV GI P+ +T+S +++QG C+ + A +Y M
Sbjct: 463 SYDVDEALRVKREMVEKGIKPDTITYS-------SLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 403 ISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAA 462
+ D TY++LI +C +GD+ K+ ++ +E+V G LPD T+S ++ L + + R+A
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 463 ELLLLELMNKCVEAEV 478
LLL + V ++V
Sbjct: 576 RLLLKLFYEESVPSDV 591
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 175/344 (50%), Gaps = 29/344 (8%)
Query: 150 GIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYE 209
G P V S N ++ A ++ + A +F+EM +P+ +TY LI G C G I
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 210 AKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMD 269
A LF +METK C P VVTY +LI+G C+ + +++ +L M KG+EPN+ +Y+ +++
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 270 GLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKP 329
GLC+ G + +L M + + + VTY+TL+ G CKEG +A+ + M GL P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 330 DAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTW-------------------- 369
Y +I C G A FLD+M + G+ PN T+
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 370 --------SLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKK 420
S + +N ++ G C T A V M+ + +S D ++YS++++ FC+
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 421 GDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAEL 464
D+ ++ R+ E+V G PD T+S+++ ++R+ ++A +L
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 216/420 (51%), Gaps = 14/420 (3%)
Query: 52 TFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKM 111
+++++I+ L + + +L +N+ + E + ++ +GY + A+ + +M
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 112 KEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGT 171
G P+ +Y +++ + + + A F MR G+ P + L+ + G
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ-KGY 395
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTS 231
M+ A+++ REM + G +P TY LING C GK+ +A + ++M+ K SP VV+Y++
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 232 LINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKR 291
+++G C+S V+EA+R+ EM KG++P+ TYSSL+ G C+ + +A +L + M+
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 292 HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
P+ TY+ L+N C EG L++A+++ + M +G+ PD Y +I+ + +EA
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 352 NFLDEMVLGGITPNRLTWSLHIRIHN----------TVVQGLC-KTDPNRAFQVYLSMRN 400
L ++ P+ +T+ H I N ++++G C K A QV+ SM
Sbjct: 576 RLLLKLFYEESVPSDVTY--HTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLG 633
Query: 401 RSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQ 460
++ D Y+ +I C+ GDI K+ + E+V G L T A++ AL K+ +
Sbjct: 634 KNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 147/460 (31%), Positives = 230/460 (50%), Gaps = 45/460 (9%)
Query: 43 ANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPL 102
A+GF + +++ L AE + ++ K + I S+ G+ R
Sbjct: 188 ADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLR 247
Query: 103 DAMRVFDKM-KEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVL 161
DA++VFD M KE C P SY ++ L E +L+ AF M E G QP + VL
Sbjct: 248 DALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 162 IKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKA 221
IKALC + G +D AF +F EM RGC P+ +TY LI+GLCR GKI EA + ++M
Sbjct: 308 IKALC-DRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR 366
Query: 222 CSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAM 281
P+V+TY +LING C+ V A L M + +PNV T++ LM+GLC+ G +A+
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV 426
Query: 282 ELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCF 341
LL+ M+ P+IV+Y+ L++GLC+EG + A ++L M ++PD + II+ F
Sbjct: 427 HLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF 486
Query: 342 CDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPNR----------- 390
C GK A+ FL M+ GI+ + +T + T++ G+CK R
Sbjct: 487 CKQGKADVASAFLGLMLRKGISLDEVTGT-------TLIDGVCKVGKTRDALFILETLVK 539
Query: 391 --------AFQVYLSMRNRSISVDS-----------------LTYSSLITCFCKKGDIHK 425
+ V L M ++ V +TY++L+ + GDI
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599
Query: 426 SARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
S RI++ + L GCLP+ ++ ++ L ++ +A +LL
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/507 (27%), Positives = 239/507 (47%), Gaps = 64/507 (12%)
Query: 3 VKTMFKWSTKITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVS 62
+K++ ++QV+ L R++ D+ ++ + Y N L +VS
Sbjct: 60 LKSLVSHMNPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKL----IVS 115
Query: 63 ANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKE-FGCEPTPK 121
+ +R A ++ + KE C E L + M FD+++E FG
Sbjct: 116 SGLYRVAHAVIVALIKE-CSRCEKEMLKL-------------MYCFDELREVFGFRLNYP 161
Query: 122 SYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDA------- 174
Y ++L L + + LA+ YR M G + ++ ALCKN T A
Sbjct: 162 CYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKI 221
Query: 175 ---------------------------AFKIFREMPNR-GCTPDSYTYGTLINGLCRLGK 206
A K+F M C P+S +Y LI+GLC +G+
Sbjct: 222 LKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGR 281
Query: 207 IYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSS 266
+ EA L +M K C P+ TYT LI LC +++A LF+EM +G +PNV TY+
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341
Query: 267 LMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQG 326
L+DGLC+ G +A + + M+ R P+++TY+ L+NG CK+G++ A E+L M+ +
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401
Query: 327 LKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKT 386
KP+ + +++ C +GK +A + L M+ G++P+ +++ N ++ GLC+
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY-------NVLIDGLCRE 454
Query: 387 DP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTW 445
N A+++ SM I D LT++++I FCK+G ++ + ++ G DE T
Sbjct: 455 GHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTG 514
Query: 446 SAVMTALWDRRKMRQAAELLLLELMNK 472
+ ++ + K R A L +LE + K
Sbjct: 515 TTLIDGVCKVGKTRDA--LFILETLVK 539
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/485 (25%), Positives = 215/485 (44%), Gaps = 80/485 (16%)
Query: 3 VKTMFKWSTKITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVS 62
+K F + I ++ +L R ++ AL +FD + E ++ ++S++I L
Sbjct: 222 LKIGFVLDSHIGTSLLLGFCRG-LNLRDALKVFDVMSKEVTCA--PNSVSYSILIHGLCE 278
Query: 63 ANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKS 122
+ A L D++ ++ C + + + + A +FD+M GC+P +
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT 338
Query: 123 YITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREM 182
Y ++ L + +++ A R M + I P V + N LI CK+ G + AF++ M
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKD-GRVVPAFELLTVM 397
Query: 183 PNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSV 242
R C P+ T+ L+ GLCR+GK Y+A L K M SP +V+Y LI+GLC+ +
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457
Query: 243 EEAMRLFEEMRSKGVEPNVFTYS-----------------------------------SL 267
A +L M +EP+ T++ +L
Sbjct: 458 NTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTL 517
Query: 268 MDGLCKGGCSSQAMELLQMMISKR-----HR----------------------------- 293
+DG+CK G + A+ +L+ ++ R H
Sbjct: 518 IDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGL 577
Query: 294 -PNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAAN 352
P++VTY+TL++GL + G + + IL+ MKL G P+ Y II+ C G+ +EA
Sbjct: 578 VPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEK 637
Query: 353 FLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPNRAFQVYLSMRNRSISVDSLTYSS 412
L M G++PN +T+++ ++ + V G K D RA + +M R ++ YSS
Sbjct: 638 LLSAMQDSGVSPNHVTYTVMVKGY--VNNG--KLD--RALETVRAMVERGYELNDRIYSS 691
Query: 413 LITCF 417
L+ F
Sbjct: 692 LLQGF 696
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 128/327 (39%), Gaps = 53/327 (16%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G D T + +I + + R A +L+ + K + T I + + +
Sbjct: 506 GISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEE 565
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ + K+ + G P+ +Y T++ L+ + +FR M+ G P V ++I
Sbjct: 566 LAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIING 625
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
LC+ G ++ A K+ M + G +P+ TY ++ G GK+ A E + M +
Sbjct: 626 LCQ-FGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYEL 684
Query: 225 TVVTYTSLINGLCQSK----------------------------SVEEAM---------- 246
Y+SL+ G S+ SV E +
Sbjct: 685 NDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIF 744
Query: 247 ---RLFEEMRSKG--------VEPNVFTYSSL---MDGLCKGGCSSQAMELLQMMISKRH 292
RL +E R+ +E VF ++ M+ C ++ MEL+ +++
Sbjct: 745 LVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGF 804
Query: 293 RPNIVTYSTLLNGLCKEGKLQEAVEIL 319
P+ ++ ++ GL KEG + A E++
Sbjct: 805 VPSFKSFCLVIQGLKKEGDAERARELV 831
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 226 bits (575), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 148/516 (28%), Positives = 251/516 (48%), Gaps = 65/516 (12%)
Query: 12 KITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAED 71
KIT Q+ +L+ +V+ ++ +F ++ NG+RH + ++I KL + +F+ +
Sbjct: 75 KITPFQLYKLLELPLNVSTSMELFSWTGSQ--NGYRHSFDVYQVLIGKLGANGEFKTIDR 132
Query: 72 LLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKE-FGCEPTPKSYITVLAIL 130
LL ++ E E +F+SI R Y + P R+ +M+ + CEPT KSY VL IL
Sbjct: 133 LLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEIL 192
Query: 131 VEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPD 190
V N K+A + M I P + + V++KA C +D+A + R+M GC P+
Sbjct: 193 VSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCA-VNEIDSALSLLRDMTKHGCVPN 251
Query: 191 SYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFE 250
S Y TLI+ L + ++ EA +L +EM C P T+ +I GLC+ + EA ++
Sbjct: 252 SVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN 311
Query: 251 EMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL-------------------------- 284
M +G P+ TY LM+GLCK G A +L
Sbjct: 312 RMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDD 371
Query: 285 ------QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKII 338
M+ S P++ TY++L+ G KEG + A+E+L M+ +G KP+ Y ++
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILV 431
Query: 339 SCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHI-------RI---------------- 375
FC +GK EA N L+EM G+ PN + ++ I RI
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK 491
Query: 376 -----HNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARI 429
N+++ GLC+ D A + M + + +++TY++LI F ++G+I ++ ++
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 430 VDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
V+E+V G DE T+++++ L ++ +A L
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Score = 206 bits (524), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 229/446 (51%), Gaps = 29/446 (6%)
Query: 24 AEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDI 83
A K VN+ L+ GF D+ T+ +++ L + A+DL R+ K + I
Sbjct: 306 AAKMVNRMLI----------RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI 355
Query: 84 TEDIFLSICRGYGRVHRPLDAMRVF-DKMKEFGCEPTPKSYITVLAILVEENQLKLAFRF 142
F ++ G+ R DA V D + +G P +Y +++ +E + LA
Sbjct: 356 ----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 143 YRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLC 202
MR G +P V S +L+ CK G +D A+ + EM G P++ + LI+ C
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCK-LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 203 RLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVF 262
+ +I EA E+F+EM K C P V T+ SLI+GLC+ ++ A+ L +M S+GV N
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 263 TYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRM 322
TY++L++ + G +A +L+ M+ + + +TY++L+ GLC+ G++ +A + ++M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 323 KLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQG 382
G P +I+ C G +EA F EMVL G TP+ +T+ N+++ G
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTF-------NSLING 643
Query: 383 LCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPD 441
LC+ ++ ++ I D++T+++L++ CK G ++ + ++DE + DG +P+
Sbjct: 644 LCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Query: 442 EGTWSAVMTAL-----WDRRKMRQAA 462
TWS ++ ++ DRR+ AA
Sbjct: 704 HRTWSILLQSIIPQETLDRRRFYNAA 729
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 216/446 (48%), Gaps = 41/446 (9%)
Query: 52 TFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKM 111
++++++ LVS N + A ++ + K T F + + + V+ A+ + M
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 112 KEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGT 171
+ GC P Y T++ L + N++ A + M +G P + N +I LCK
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEM-------------- 217
+AA K+ M RG PD TYG L+NGLC++G++ AK+LF +
Sbjct: 304 NEAA-KMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHG 362
Query: 218 --------ETKAC----------SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEP 259
+ KA P V TY SLI G + V A+ + +MR+KG +P
Sbjct: 363 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP 422
Query: 260 NVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEIL 319
NV++Y+ L+DG CK G +A +L M + +PN V ++ L++ CKE ++ EAVEI
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 320 DRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTV 379
M +G KPD + +IS C++ + + A L +M+ G+ N +T+ NT+
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY-------NTL 535
Query: 380 VQG-LCKTDPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGC 438
+ L + + A ++ M + +D +TY+SLI C+ G++ K+ + ++++ DG
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 439 LPDEGTWSAVMTALWDRRKMRQAAEL 464
P + + ++ L + +A E
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEF 621
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 278 SQAMELLQMMISKR-HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGK 336
S +MEL S+ +R + Y L+ L G+ + +L +MK +G+ L+
Sbjct: 92 STSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFIS 151
Query: 337 IISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPNR-AFQVY 395
I+ + G + + EM N + + +N V++ L + ++ A V+
Sbjct: 152 IMRDYDKAGFPGQTTRLMLEM------RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVF 205
Query: 396 LSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDR 455
M +R I T+ ++ FC +I + ++ ++ GC+P+ + ++ +L
Sbjct: 206 YDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKC 265
Query: 456 RKMRQAAELLLLELMNKCV 474
++ +A +LL + CV
Sbjct: 266 NRVNEALQLLEEMFLMGCV 284
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 233/438 (53%), Gaps = 12/438 (2%)
Query: 17 QVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLL-DR 75
V +I+ +KD KAL +F+S E GF+H ST+ +I KL +F E++L D
Sbjct: 9 HVTAVIKCQKDPMKALEMFNSMRKEV--GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDM 66
Query: 76 VNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQ 135
+ E +++ + YGR + +A+ VF++M + CEPT SY ++++LV+
Sbjct: 67 RENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGY 126
Query: 136 LKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYG 195
A + Y MR+ GI P V S + +K+ CK S AA ++ M ++GC + Y
Sbjct: 127 FDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRP-HAALRLLNNMSSQGCEMNVVAYC 185
Query: 196 TLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSK 255
T++ G E ELF +M S + T+ L+ LC+ V+E +L +++ +
Sbjct: 186 TVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR 245
Query: 256 GVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEA 315
GV PN+FTY+ + GLC+ G A+ ++ +I + +P+++TY+ L+ GLCK K QEA
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Query: 316 VEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRI 375
L +M +GL+PD+ Y +I+ +C G Q A + + V G P++ T+
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYR----- 360
Query: 376 HNTVVQGLC-KTDPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELV 434
+++ GLC + + NRA ++ + I + + Y++LI +G I ++A++ +E+
Sbjct: 361 --SLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418
Query: 435 LDGCLPDEGTWSAVMTAL 452
G +P+ T++ ++ L
Sbjct: 419 EKGLIPEVQTFNILVNGL 436
Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 129/431 (29%), Positives = 221/431 (51%), Gaps = 21/431 (4%)
Query: 51 STFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHR-PLD-AMRVF 108
STF+ ++ L + E LLD+V K + ++F G R LD A+R+
Sbjct: 217 STFNKLLRVLCKKGDVKECEKLLDKVIKR--GVLPNLFTYNLFIQGLCQRGELDGAVRMV 274
Query: 109 DKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKN 168
+ E G +P +Y ++ L + ++ + A + M G++P + N LI CK
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK- 333
Query: 169 SGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVT 228
G + A +I + G PD +TY +LI+GLC G+ A LF E K P V+
Sbjct: 334 GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL 393
Query: 229 YTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMI 288
Y +LI GL + EA +L EM KG+ P V T++ L++GLCK GC S A L+++MI
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 289 SKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQ 348
SK + P+I T++ L++G + K++ A+EILD M G+ PD Y +++ C K++
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 349 EAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDS 407
+ MV G PN T+ N +++ LC+ + A + M+N+S++ D+
Sbjct: 514 DVMETYKTMVEKGCAPNLFTF-------NILLESLCRYRKLDEALGLLEEMKNKSVNPDA 566
Query: 408 LTYSSLITCFCKKGDIHKSARIVDEL----VLDGCLPDEGTWSAVMTALWDRRKMRQAAE 463
+T+ +LI FCK GD+ + + ++ + P T++ ++ A ++ + AE
Sbjct: 567 VTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTP---TYNIIIHAFTEKLNVTM-AE 622
Query: 464 LLLLELMNKCV 474
L E++++C+
Sbjct: 623 KLFQEMVDRCL 633
Score = 178 bits (452), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 204/422 (48%), Gaps = 8/422 (1%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G + D T++ +I L ++F+ AE L ++ E + + ++ GY + A
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
R+ G P +Y +++ L E + A + GI+P V N LIK
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
L N G + A ++ EM +G P+ T+ L+NGLC++G + +A L K M +K P
Sbjct: 401 L-SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP 459
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL 284
+ T+ LI+G +E A+ + + M GV+P+V+TY+SL++GLCK ME
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY 519
Query: 285 QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDI 344
+ M+ K PN+ T++ LL LC+ KL EA+ +L+ MK + + PDA +G +I FC
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Query: 345 GKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLC-KTDPNRAFQVYLSMRNRSI 403
G A +M S +N ++ K + A +++ M +R +
Sbjct: 580 GDLDGAYTLFRKM------EEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 404 SVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAE 463
D TY ++ FCK G+++ + + E++ +G +P T V+ L ++ +AA
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAG 693
Query: 464 LL 465
++
Sbjct: 694 II 695
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 157/357 (43%), Gaps = 37/357 (10%)
Query: 44 NGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLD 103
NGF D T+ +I L + A L + + ++ ++ +G L+
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 104 AMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIK 163
A ++ ++M E G P +++ ++ L + + A + M G P + + N+LI
Sbjct: 410 AAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469
Query: 164 ALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACS 223
M+ A +I M + G PD YTY +L+NGLC+ K + E +K M K C+
Sbjct: 470 GYSTQL-KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Query: 224 PTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGG-------- 275
P + T+ L+ LC+ + ++EA+ L EEM++K V P+ T+ +L+DG CK G
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588
Query: 276 ----------------------------CSSQAMELLQMMISKRHRPNIVTYSTLLNGLC 307
+ A +L Q M+ + P+ TY +++G C
Sbjct: 589 FRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFC 648
Query: 308 KEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITP 364
K G + + L M G P G++I+C C + EAA + MV G+ P
Sbjct: 649 KTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 86 DIFLS--ICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFY 143
DIF + GY + +A+ + D M + G +P +Y ++L L + ++ + Y
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY 519
Query: 144 RHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCR 203
+ M E G P + + N+L+++LC+ +D A + EM N+ PD+ T+GTLI+G C+
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYR-KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCK 578
Query: 204 LGKIYEAKELFKEME-TKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVF 262
G + A LF++ME S + TY +I+ + +V A +LF+EM + + P+ +
Sbjct: 579 NGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY 638
Query: 263 TYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRM 322
TY ++DG CK G + + L M+ P++ T ++N LC E ++ EA I+ RM
Sbjct: 639 TYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRM 698
Query: 323 KLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
+GL P+A ++ CD+ K + AA
Sbjct: 699 VQKGLVPEA------VNTICDVDKKEVAA 721
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 114/260 (43%), Gaps = 10/260 (3%)
Query: 209 EAKELFKEMETK-ACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSK-GVEPNVFTYSS 266
+A E+F M + T+ TY S+I L E + +MR G Y
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81
Query: 267 LMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQG 326
M + G +A+ + + M P + +Y+ +++ L G +A ++ RM+ +G
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 327 LKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKT 386
+ PD + + FC + A L+ M G N + + TVV G +
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYC-------TVVGGFYEE 194
Query: 387 D-PNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTW 445
+ ++++ M +S+ T++ L+ CKKGD+ + +++D+++ G LP+ T+
Sbjct: 195 NFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTY 254
Query: 446 SAVMTALWDRRKMRQAAELL 465
+ + L R ++ A ++
Sbjct: 255 NLFIQGLCQRGELDGAVRMV 274
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/467 (28%), Positives = 233/467 (49%), Gaps = 34/467 (7%)
Query: 30 KALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRV--NKEKCDITEDI 87
K L F + G+ D TFS +++ + A L+DR+ K++ D+
Sbjct: 120 KLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVT-- 177
Query: 88 FLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMR 147
++ G R +A+ + D+M E+G +P +Y VL L + LA +R M
Sbjct: 178 VSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKME 237
Query: 148 EIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKI 207
E I+ V +++I +LCK+ G+ D A +F EM +G D TY +LI GLC GK
Sbjct: 238 ERNIKASVVQYSIVIDSLCKD-GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296
Query: 208 YEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSL 267
+ ++ +EM + P VVT+++LI+ + + EA L+ EM ++G+ P+ TY+SL
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 268 MDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGL 327
+DG CK C +A ++ +M+SK P+IVTYS L+N CK ++ + + + + +GL
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 328 KPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTW------------------ 369
P+ Y ++ FC GK A EMV G+ P+ +T+
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
Query: 370 ----------SLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFC 418
+L I I+N ++ G+C + A+ ++ S+ ++ + D +TY+ +I C
Sbjct: 477 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536
Query: 419 KKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
KKG + ++ + ++ DGC PD+ T++ ++ A + + EL+
Sbjct: 537 KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELI 583
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 227/439 (51%), Gaps = 12/439 (2%)
Query: 28 VNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDI 87
V++ALV+ D EY GF+ D T+ ++++L + A DL ++ + +
Sbjct: 191 VSEALVLIDR-MVEY--GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 88 FLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMR 147
+ + + DA+ +F++M+ G + +Y +++ L + + + R M
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 148 EIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKI 207
I P V + + LI K ++A +++ EM RG PD+ TY +LI+G C+ +
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAK-ELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 208 YEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSL 267
+EA ++F M +K C P +VTY+ LIN C++K V++ MRLF E+ SKG+ PN TY++L
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 268 MDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGL 327
+ G C+ G + A EL Q M+S+ P++VTY LL+GLC G+L +A+EI ++M+ +
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 328 KPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD 387
G+Y II C+ K +A + + G+ P+ +T+ N ++ GLCK
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY-------NVMIGGLCKKG 539
Query: 388 P-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWS 446
+ A ++ M+ + D TY+ LI + S +++E+ + G D T
Sbjct: 540 SLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIK 599
Query: 447 AVMTALWDRRKMRQAAELL 465
V+ L DRR + ++L
Sbjct: 600 MVIDMLSDRRLDKSFLDML 618
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 192/363 (52%), Gaps = 7/363 (1%)
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
DA+ +F+ M + PTP + + + + Q L F + M GI+ + ++ ++I
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
C+ + AF + G PD+ T+ TL+NG C G++ EA L M
Sbjct: 113 NCYCRKKKLL-FAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ 171
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME 282
P +VT ++LINGLC V EA+ L + M G +P+ TY +++ LCK G S+ A++
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231
Query: 283 LLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFC 342
L + M + + ++V YS +++ LCK+G +A+ + + M+++G+K D Y +I C
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 343 DIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPNRAFQVYLSMRNRS 402
+ GK+ + A L EM+ I P+ +T+S I + V +G A ++Y M R
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF--VKEGKLL----EAKELYNEMITRG 345
Query: 403 ISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAA 462
I+ D++TY+SLI FCK+ +H++ ++ D +V GC PD T+S ++ + +++
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 463 ELL 465
L
Sbjct: 406 RLF 408
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 193/372 (51%), Gaps = 9/372 (2%)
Query: 95 YGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPC 154
Y R + L A V + + G EP ++ T++ E ++ A M E+ +P
Sbjct: 115 YCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD 174
Query: 155 VASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELF 214
+ +++ LI LC G + A + M G PD TYG ++N LC+ G A +LF
Sbjct: 175 LVTVSTLINGLCLK-GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 215 KEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKG 274
++ME + +VV Y+ +I+ LC+ S ++A+ LF EM KG++ +V TYSSL+ GLC
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 275 GCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLY 334
G ++L+ MI + P++VT+S L++ KEGKL EA E+ + M +G+ PD Y
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 335 GKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRAFQ 393
+I FC EA D MV G P+ +T+S+ ++ CK + +
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI-------LINSYCKAKRVDDGMR 406
Query: 394 VYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALW 453
++ + ++ + +++TY++L+ FC+ G ++ + + E+V G P T+ ++ L
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Query: 454 DRRKMRQAAELL 465
D ++ +A E+
Sbjct: 467 DNGELNKALEIF 478
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 220 bits (561), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/473 (27%), Positives = 243/473 (51%), Gaps = 14/473 (2%)
Query: 9 WSTKITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRP 68
W ++ +++ +I +++++ AL IF A + GF H+ T+ ++ KL A F P
Sbjct: 43 WPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHP-GFTHNYDTYHSILFKLSRARAFDP 101
Query: 69 AEDLLDRVNKEKCDIT--EDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITV 126
E L+ + I E++F+ + R YG R +MR+F ++ +FG + + +S T+
Sbjct: 102 VESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTL 161
Query: 127 LAILVEENQLKLAFRFYRHMRE-IGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNR 185
L +L++ + L +++ +E GI P + + N+L+KALCK + +++A+K+ E+P+
Sbjct: 162 LNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKN-DIESAYKVLDEIPSM 220
Query: 186 GCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEA 245
G P+ TY T++ G G + AK + +EM + P TYT L++G C+ EA
Sbjct: 221 GLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEA 280
Query: 246 MRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNG 305
+ ++M +EPN TY ++ LCK S +A + M+ + P+ +++
Sbjct: 281 ATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDA 340
Query: 306 LCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPN 365
LC++ K+ EA + +M PD L +I C G+ EA DE G I P+
Sbjct: 341 LCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PS 399
Query: 366 RLTWSLHIRIHNTVVQGLC-KTDPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIH 424
LT +NT++ G+C K + A +++ M R ++ TY+ LI K G++
Sbjct: 400 LLT-------YNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVK 452
Query: 425 KSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELMNKCVEAE 477
+ R+++E++ GC P++ T+ + L K A +++ + +MN V+ E
Sbjct: 453 EGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKE 505
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 162/345 (46%), Gaps = 8/345 (2%)
Query: 35 FDSATAEYAN-----GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFL 89
FD A + N G + T +L++ L N A +LD + +
Sbjct: 171 FDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYT 230
Query: 90 SICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREI 149
+I GY A RV ++M + G P +Y ++ + + A M +
Sbjct: 231 TILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKN 290
Query: 150 GIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYE 209
I+P + V+I+ALCK + +A +F EM R PDS +I+ LC K+ E
Sbjct: 291 EIEPNEVTYGVMIRALCKEKKSGEAR-NMFDEMLERSFMPDSSLCCKVIDALCEDHKVDE 349
Query: 210 AKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMD 269
A L+++M C P ++LI+ LC+ V EA +LF+E KG P++ TY++L+
Sbjct: 350 ACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIA 408
Query: 270 GLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKP 329
G+C+ G ++A L M ++ +PN TY+ L+ GL K G ++E V +L+ M G P
Sbjct: 409 GMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFP 468
Query: 330 DAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIR 374
+ + + +GK ++A + V+ G ++ +W L ++
Sbjct: 469 NKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKV-DKESWELFLK 512
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 216 bits (550), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 222/438 (50%), Gaps = 34/438 (7%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNK--EKCDITEDIFLSICRGYGRVHRPL 102
G+ + TFS +I+ L + A +L+DR+ + K D+ ++ G +
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLIT--INTLVNGLCLSGKEA 210
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
+AM + DKM E+GC+P +Y VL ++ + Q LA R M E I+ +++I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
LCK+ G++D AF +F EM +G T + TY LI G C G+ + +L ++M +
Sbjct: 271 DGLCKH-GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME 282
+P VVT++ LI+ + + EA L +EM +G+ P+ TY+SL+DG CK +A +
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 389
Query: 283 LLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFC 342
++ +M+SK PNI T++ L+NG CK ++ + +E+ +M L+G+ D Y +I FC
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449
Query: 343 DIGKYQEAANFLDEMVLGGITPNRLTW----------------------------SLHIR 374
++GK A EMV + PN +T+ L I
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG 509
Query: 375 IHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDEL 433
I+N ++ G+C + A+ ++ S+ + + TY+ +I CKKG + ++ + ++
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Query: 434 VLDGCLPDEGTWSAVMTA 451
DG PD T++ ++ A
Sbjct: 570 EEDGHAPDGWTYNILIRA 587
Score = 188 bits (477), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 193/363 (53%), Gaps = 7/363 (1%)
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
DA+ +F M PT + + + + + Q L + M GI + +L+++I
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
C+ + AF ++ G P++ T+ TLINGLC G++ EA EL M
Sbjct: 131 NCFCR-CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME 282
P ++T +L+NGLC S EAM L ++M G +PN TY +++ +CK G ++ AME
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 283 LLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFC 342
LL+ M + + + V YS +++GLCK G L A + + M+++G+ + Y +I FC
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 343 DIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPNRAFQVYLSMRNRS 402
+ G++ + A L +M+ I PN +T+S + I + V +G + A +++ M +R
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFS--VLIDSFVKEGKLR----EAEELHKEMIHRG 363
Query: 403 ISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAA 462
I+ D++TY+SLI FCK+ + K+ ++VD +V GC P+ T++ ++ ++
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 423
Query: 463 ELL 465
EL
Sbjct: 424 ELF 426
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 178/368 (48%), Gaps = 11/368 (2%)
Query: 49 DNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDI--FLSICRGYGRVHRPLDAMR 106
D +S++I L A +L + + E IT +I + + G+ R D +
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEM--EMKGITTNIITYNILIGGFCNAGRWDDGAK 319
Query: 107 VFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALC 166
+ M + P ++ ++ V+E +L+ A ++ M GI P + LI C
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379
Query: 167 KNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTV 226
K + +D A ++ M ++GC P+ T+ LING C+ +I + ELF++M +
Sbjct: 380 KEN-HLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 227 VTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQM 286
VTY +LI G C+ + A LF+EM S+ V PN+ TY L+DGLC G S +A+E+ +
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Query: 287 MISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGK 346
+ + +I Y+ +++G+C K+ +A ++ + L+G+KP Y +I C G
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 558
Query: 347 YQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPNRAFQVYLSMRNRSISVD 406
EA +M G P+ T+++ IR H L D ++ ++ ++ SVD
Sbjct: 559 LSEAELLFRKMEEDGHAPDGWTYNILIRAH------LGDGDATKSVKLIEELKRCGFSVD 612
Query: 407 SLTYSSLI 414
+ T +I
Sbjct: 613 ASTIKMVI 620
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 167/336 (49%), Gaps = 9/336 (2%)
Query: 139 AFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLI 198
A +R M P V + L A+ K + D + ++M +G + YT +I
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAK-TKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 199 NGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVE 258
N CR K+ A ++ P +T+++LINGLC V EA+ L + M G +
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 259 PNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEI 318
P++ T ++L++GLC G ++AM L+ M+ +PN VTY +LN +CK G+ A+E+
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 319 LDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNT 378
L +M+ + +K DA Y II C G A N +EM + GIT N +T+ N
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY-------NI 303
Query: 379 VVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDG 437
++ G C + ++ M R I+ + +T+S LI F K+G + ++ + E++ G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 438 CLPDEGTWSAVMTALWDRRKMRQAAELLLLELMNKC 473
PD T+++++ + +A +++ L + C
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 154/293 (52%), Gaps = 8/293 (2%)
Query: 173 DAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSL 232
D A +FR+M + P + L + + + + L K+ME K + + T + +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 233 INGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRH 292
IN C+ + + A ++ G EPN T+S+L++GLC G S+A+EL+ M+ H
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 293 RPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAAN 352
+P+++T +TL+NGLC GK EA+ ++D+M G +P+A YG +++ C G+ A
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 353 FLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYS 411
L +M I + + +S+ ++ GLCK + AF ++ M + I+ + +TY+
Sbjct: 250 LLRKMEERNIKLDAVKYSI-------IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYN 302
Query: 412 SLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAEL 464
LI FC G A+++ +++ P+ T+S ++ + K+R+A EL
Sbjct: 303 ILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 355
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 160/339 (47%), Gaps = 39/339 (11%)
Query: 52 TFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKM 111
T++++I +A ++ LL + K K + F + + + + +A + +M
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 112 KEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGT 171
G P +Y +++ +EN L A + M G P + + N+LI CK +
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCK-ANR 418
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTS 231
+D ++FR+M RG D+ TY TLI G C LGK+ AKELF+EM ++ P +VTY
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 232 LINGLCQSKSVEEAMRLFEEMRS-----------------------------------KG 256
L++GLC + E+A+ +FE++ KG
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 257 VEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAV 316
V+P V TY+ ++ GLCK G S+A L + M H P+ TY+ L+ +G ++V
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 598
Query: 317 EILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLD 355
++++ +K G DA +I D G+ +++ FLD
Sbjct: 599 KLIEELKRCGFSVDASTIKMVIDMLSD-GRLKKS--FLD 634
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 111/275 (40%), Gaps = 34/275 (12%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G D T++ +I N A ++D + + CD F + GY + +R D
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ +F KM G +Y T++ E +L +A ++ M + P + + +L+
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 165 LCKN----------------------------------SGTMDAAFKIFREMPNRGCTPD 190
LC N + +D A+ +F +P +G P
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG 542
Query: 191 SYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFE 250
TY +I GLC+ G + EA+ LF++ME +P TY LI ++++L E
Sbjct: 543 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 602
Query: 251 EMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQ 285
E++ G + T ++D L G +++L
Sbjct: 603 ELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDMLS 637
>sp|Q9ZUU3|PP190_ARATH Pentatricopeptide repeat-containing protein At2g37230
OS=Arabidopsis thaliana GN=At2g37230 PE=2 SV=1
Length = 757
Score = 215 bits (548), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 244/501 (48%), Gaps = 41/501 (8%)
Query: 18 VLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVN 77
V ++ K + AL F E + RHD T MI L ++ A +L +
Sbjct: 120 VYNVLHGAKKLEHALQFF--RWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMP 177
Query: 78 KEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLK 137
++ ED+F+ + YG+ +++++F KMK+ G E T KSY ++ +++ +
Sbjct: 178 EKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYM 237
Query: 138 LAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTL 197
+A R++ M G++P + N+++ S ++ A + F +M RG +PD T+ T+
Sbjct: 238 MAKRYFNKMVSEGVEPTRHTYNLMLWGFFL-SLRLETALRFFEDMKTRGISPDDATFNTM 296
Query: 198 INGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGV 257
ING CR K+ EA++LF EM+ P+VV+YT++I G V++ +R+FEEMRS G+
Sbjct: 297 INGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGI 356
Query: 258 EPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRP-NIVTYSTLLNGLCKEGKLQEAV 316
EPN TYS+L+ GLC G +A +L+ M++K P + + LL K G + A
Sbjct: 357 EPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAAT 416
Query: 317 EILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGIT-PNRLTWSLHIRI 375
E+L M + +AG YG +I C Y A LD ++ I ++ T +
Sbjct: 417 EVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSA 476
Query: 376 HNTVVQGLCKT-----------------------------------DPNRAFQVYLSMRN 400
+N +++ LC +P+ ++++ M
Sbjct: 477 YNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSR 536
Query: 401 RSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQ 460
R + +S Y LI + KG+ + +D +V DG +PD + +V+ +L++ +++
Sbjct: 537 RGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQT 596
Query: 461 AAELLLLEL-MNKCVEAEVDI 480
A+ ++++ + N +E +D+
Sbjct: 597 ASRVMMIMIDKNVGIEDNMDL 617
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 108/244 (44%), Gaps = 15/244 (6%)
Query: 117 EPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAF 176
E P +Y ++ L Q A +R + + G+Q A LN LI+ K G D+++
Sbjct: 471 EMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDA-LNNLIRGHAK-EGNPDSSY 528
Query: 177 KIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGL 236
+I + M RG +S Y LI G+ +AK M P + S+I L
Sbjct: 529 EILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESL 588
Query: 237 CQSKSVEEAMRLFEEMRSK--GVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRP 294
+ V+ A R+ M K G+E N+ + +++ L G +A+ + ++ H
Sbjct: 589 FEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTA 648
Query: 295 NIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGL----YGKIISCFCDIGKYQEA 350
++ +LL+ L ++GK A+++LD GL+ D L Y K++ GK A
Sbjct: 649 DL---DSLLSVLSEKGKTIAALKLLDF----GLERDLSLEFSSYDKVLDALLGAGKTLNA 701
Query: 351 ANFL 354
+ L
Sbjct: 702 YSVL 705
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 214/424 (50%), Gaps = 9/424 (2%)
Query: 43 ANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPL 102
A G + D T+ +++ L A LL ++ K K + I+ +I
Sbjct: 213 ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVN 272
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
DA+ +F +M G P +Y +++ L + A R M E I P V + + LI
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 332
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
A K G + A K++ EM R PD +TY +LING C ++ EAK +F+ M +K C
Sbjct: 333 DAFVK-EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME 282
P VVTY +LI G C++K VEE M LF EM +G+ N TY++L+ GL + G A +
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 283 LLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFC 342
+ + M+S P+I+TYS LL+GLCK GKL++A+ + + ++ ++PD Y +I C
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511
Query: 343 DIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRAFQVYLSMRNR 401
GK ++ + + L G+ PN + I+ T++ G C+ A ++ M+
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPN-------VIIYTTMISGFCRKGLKEEADALFREMKED 564
Query: 402 SISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQA 461
+S TY++LI + GD SA ++ E+ G + D T S V+ L D R +
Sbjct: 565 GTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSY 624
Query: 462 AELL 465
E+L
Sbjct: 625 LEML 628
Score = 211 bits (536), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/440 (32%), Positives = 226/440 (51%), Gaps = 24/440 (5%)
Query: 53 FSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLS------ICRGYGRVHRPLDAMR 106
F+ ++S + N+F L +R+ + I+ D++ CR R PL A+
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLR--ISYDLYSYNILINCFCR---RSQLPL-ALA 136
Query: 107 VFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALC 166
V KM + G EP + ++L ++ A M + QP + N LI L
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196
Query: 167 KNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTV 226
++ +A I R M RGC PD +TYGT++NGLC+ G I A L K+ME V
Sbjct: 197 LHNKASEAVALIDR-MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 255
Query: 227 VTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQM 286
V YT++I+ LC K+V +A+ LF EM +KG+ PNV TY+SL+ LC G S A LL
Sbjct: 256 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 315
Query: 287 MISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGK 346
MI ++ PN+VT+S L++ KEGKL EA ++ D M + + PD Y +I+ FC +
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 347 YQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRAFQVYLSMRNRSISV 405
EA + + M+ PN +T+ NT+++G CK +++ M R +
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTY-------NTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 406 DSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
+++TY++LI + GD + +I ++V DG PD T+S ++ L K+ +A L+
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA--LV 486
Query: 466 LLELMNKCVEAEVDIQNQDV 485
+ E + K + E DI ++
Sbjct: 487 VFEYLQKS-KMEPDIYTYNI 505
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 183/364 (50%), Gaps = 9/364 (2%)
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
DA+ +F +M + P+ + +L+ + + N+ L M+ + I + S N+LI
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
C+ S + A + +M G PD T +L+NG C +I EA L +M
Sbjct: 123 NCFCRRS-QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME 282
P VT+ +LI+GL EA+ L + M ++G +P++FTY ++++GLCK G A+
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 283 LLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFC 342
LL+ M + ++V Y+T+++ LC + +A+ + M +G++P+ Y +I C C
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 343 DIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNR 401
+ G++ +A+ L +M+ I PN +T+S ++ K A ++Y M R
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFS-------ALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 402 SISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQA 461
SI D TYSSLI FC + ++ + + ++ C P+ T++ ++ +++ +
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 462 AELL 465
EL
Sbjct: 415 MELF 418
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 158/308 (51%), Gaps = 9/308 (2%)
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTS 231
+D A +F EM P + L++ + ++ K L + M+ S + +Y
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 232 LINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKR 291
LIN C+ + A+ + +M G EP++ T SSL++G C G S+A+ L+ M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 292 HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
++PN VT++TL++GL K EAV ++DRM +G +PD YG +++ C G A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 352 NFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCK-TDPNRAFQVYLSMRNRSISVDSLTY 410
+ L +M G I + + I+ T++ LC + N A ++ M N+ I + +TY
Sbjct: 241 SLLKKMEKGKIEAD-------VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 411 SSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELM 470
+SLI C C G ++R++ +++ P+ T+SA++ A K+ + AE L E++
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE-AEKLYDEMI 352
Query: 471 NKCVEAEV 478
+ ++ ++
Sbjct: 353 KRSIDPDI 360
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 211 bits (538), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 213/396 (53%), Gaps = 15/396 (3%)
Query: 83 ITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRF 142
IT ++ +S GY + +A+ V D+M P +Y T+L L + +LK A
Sbjct: 173 ITYNVMIS---GYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 143 YRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLC 202
M + P V + +LI+A C++SG + A K+ EM +RGCTPD TY L+NG+C
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSG-VGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 203 RLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVF 262
+ G++ EA + +M + C P V+T+ ++ +C + +A +L +M KG P+V
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 263 TYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRM 322
T++ L++ LC+ G +A+++L+ M +PN ++Y+ LL+G CKE K+ A+E L+RM
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 323 KLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQG 382
+G PD Y +++ C GK ++A L+++ G +P +T+ NTV+ G
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY-------NTVIDG 458
Query: 383 LCKTD-PNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPD 441
L K +A ++ MR + + D++TYSSL+ ++G + ++ + E G P+
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518
Query: 442 EGTWSAVMTALWDRRKMRQAAELLLLELMNKCVEAE 477
T++++M L R+ +A + L+ + C E
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554
Score = 211 bits (536), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 231/435 (53%), Gaps = 21/435 (4%)
Query: 43 ANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFL-SICRGYGRVHRP 101
+G D T+++MIS A + A +LDR++ +T + L S+C G++ +
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDS-GKLKQ- 222
Query: 102 LDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVL 161
AM V D+M + C P +Y ++ ++ + A + MR+ G P V + NVL
Sbjct: 223 --AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 162 IKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKA 221
+ +CK G +D A K +MP+ GC P+ T+ ++ +C G+ +A++L +M K
Sbjct: 281 VNGICK-EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 222 CSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAM 281
SP+VVT+ LIN LC+ + A+ + E+M G +PN +Y+ L+ G CK +A+
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 282 ELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCF 341
E L+ M+S+ P+IVTY+T+L LCK+GK+++AVEIL+++ +G P Y +I
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 342 CDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRN 400
GK +A LDEM + P+ +T+S ++V GL + + A + +
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYS-------SLVGGLSREGKVDEAIKFFHEFER 512
Query: 401 RSISVDSLTYSSLITCFCKKGDIHKSARIVDELVL---DGCLPDEGTWSAVMTALWDRRK 457
I +++T++S++ CK ++ R +D LV GC P+E +++ ++ L
Sbjct: 513 MGIRPNAVTFNSIMLGLCKS---RQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGM 569
Query: 458 MRQAAELLLLELMNK 472
++A E LL EL NK
Sbjct: 570 AKEALE-LLNELCNK 583
Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 177/337 (52%), Gaps = 12/337 (3%)
Query: 130 LVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTP 189
+V +L+ F+F +M G P + LI+ C+ T AA KI + G P
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAA-KILEILEGSGAVP 170
Query: 190 DSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLF 249
D TY +I+G C+ G+I A + M + SP VVTY +++ LC S +++AM +
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 250 EEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKE 309
+ M + P+V TY+ L++ C+ AM+LL M + P++VTY+ L+NG+CKE
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 310 GKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTW 369
G+L EA++ L+ M G +P+ + I+ C G++ +A L +M+ G +P+ +T+
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 370 SLHIRIHNTVVQGLCKTD-PNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSAR 428
N ++ LC+ RA + M +SL+Y+ L+ FCK+ + ++
Sbjct: 348 -------NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 429 IVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
++ +V GC PD T++ ++TAL K+ A E+L
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 165/322 (51%), Gaps = 9/322 (2%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCD---ITEDIFL-SICRGYGRVHR 100
G D T++++++ + + A L+ + C IT +I L S+C R
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS----TGR 324
Query: 101 PLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNV 160
+DA ++ M G P+ ++ ++ L + L A M + G QP S N
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 161 LIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETK 220
L+ CK MD A + M +RGC PD TY T++ LC+ GK+ +A E+ ++ +K
Sbjct: 385 LLHGFCKEK-KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 221 ACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQA 280
CSP ++TY ++I+GL ++ +A++L +EMR+K ++P+ TYSSL+ GL + G +A
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 281 MELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISC 340
++ RPN VT+++++ GLCK + A++ L M +G KP+ Y +I
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Query: 341 FCDIGKYQEAANFLDEMVLGGI 362
G +EA L+E+ G+
Sbjct: 564 LAYEGMAKEALELLNELCNKGL 585
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 303 LNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGI 362
L + + G+L+E + L+ M G PD +I FC +GK ++AA L+ + G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 363 TPNRLTWSLHIRIHNTVVQGLCKT-DPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKG 421
P+ +T+ N ++ G CK + N A V M S+S D +TY++++ C G
Sbjct: 169 VPDVITY-------NVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSG 218
Query: 422 DIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
+ ++ ++D ++ C PD T++ ++ A + A +LL
Sbjct: 219 KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 210 bits (534), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 205/383 (53%), Gaps = 12/383 (3%)
Query: 104 AMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIK 163
A+ V KM + G EP + ++L N++ A M E+G QP + N LI
Sbjct: 135 ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH 194
Query: 164 ALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACS 223
L +++ +A + R M +GC PD TYG ++NGLC+ G I A L K+ME
Sbjct: 195 GLFRHNRASEAVALVDR-MVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE 253
Query: 224 PTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMEL 283
P VV Y ++I+ LC K+V +A+ LF EM +KG+ PNV TY+SL+ LC G S A L
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 284 LQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCD 343
L MI ++ PN+VT+S L++ KEGKL EA ++ D M + + PD Y +I+ FC
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 344 IGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRAFQVYLSMRNRS 402
+ EA + + M+ PN +T+ NT+++G CK + +++ M R
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTY-------NTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 403 ISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAA 462
+ +++TY++LI F + + + + ++V DG LPD T+S ++ L + K+ A
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA- 485
Query: 463 ELLLLELMNKCVEAEVDIQNQDV 485
L++ E + + + E DI ++
Sbjct: 486 -LVVFEYLQRS-KMEPDIYTYNI 506
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 228/458 (49%), Gaps = 32/458 (6%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G+ D T + +++ N+ A L+ ++ + F ++ G R +R +A
Sbjct: 146 GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ + D+M GC+P +Y V+ L + + LA + M + I+P V N +I A
Sbjct: 206 VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDA 265
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
LC N ++ A +F EM N+G P+ TY +LI LC G+ +A L +M + +P
Sbjct: 266 LC-NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 324
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL 284
VVT+++LI+ + + EA +L++EM + ++P++FTYSSL++G C +A +
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 285 QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDI 344
++MISK PN+VTY+TL+ G CK ++ E +E+ M +GL + Y +I F
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 444
Query: 345 GKYQEAANFLDEMVLGGITPNRLTWSL----------------------------HIRIH 376
+ A +MV G+ P+ +T+S+ I +
Sbjct: 445 RECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTY 504
Query: 377 NTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVL 435
N +++G+CK + ++ S+ + + + +TY+++++ FC+KG ++ + E+
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564
Query: 436 DGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELMNKC 473
+G LPD GT++ ++ A R +AA L+ M C
Sbjct: 565 EGPLPDSGTYNTLIRA--HLRDGDKAASAELIREMRSC 600
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 203/413 (49%), Gaps = 9/413 (2%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G + D T+ ++++ L A LL ++ + K + I+ +I DA
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ +F +M G P +Y +++ L + A R M E I P V + + LI A
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
K G + A K++ EM R PD +TY +LING C ++ EAK +F+ M +K C P
Sbjct: 336 FVK-EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL 284
VVTY +LI G C++K V+E M LF EM +G+ N TY++L+ G + A +
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 285 QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDI 344
+ M+S P+I+TYS LL+GLC GK++ A+ + + ++ ++PD Y +I C
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 345 GKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRAFQVYLSMRNRSI 403
GK ++ + + L G+ PN +T++ T++ G C+ A ++ M+
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVVTYT-------TMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 404 SVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRR 456
DS TY++LI + GD SA ++ E+ + D T V L D R
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGR 620
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 176/346 (50%), Gaps = 17/346 (4%)
Query: 134 NQLKL--AFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDS 191
N LKL A + M + P + + L+ A+ K + D + +M N G + +
Sbjct: 58 NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMN-KFDLVISLGEQMQNLGISHNL 116
Query: 192 YTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEE 251
YTY LIN CR ++ A + +M P +VT SL+NG C + +A+ L +
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 252 MRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGK 311
M G +P+ FT+++L+ GL + +S+A+ L+ M+ K +P++VTY ++NGLCK G
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 312 LQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSL 371
+ A+ +L +M+ ++P +Y II C+ +A N EM GI PN +T+
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY-- 294
Query: 372 HIRIHNTVVQGLCK----TDPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSA 427
N++++ LC +D +R M R I+ + +T+S+LI F K+G + ++
Sbjct: 295 -----NSLIRCLCNYGRWSDASRLLS---DMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 428 RIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELMNKC 473
++ DE++ PD T+S+++ ++ +A + L + C
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392
Score = 39.7 bits (91), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 83/189 (43%), Gaps = 4/189 (2%)
Query: 13 ITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDL 72
+T ++ ++ + A ++F ++ G D T+S+++ L + + A +
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSD---GVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 73 LDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVE 132
+ + + K + + + G + + D +F + G +P +Y T+++
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Query: 133 ENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSY 192
+ + A +R M+E G P + N LI+A ++ G A+ ++ REM + D+
Sbjct: 549 KGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRD-GDKAASAELIREMRSCRFVGDAS 607
Query: 193 TYGTLINGL 201
T G + N L
Sbjct: 608 TIGLVTNML 616
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 209 bits (531), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 229/450 (50%), Gaps = 30/450 (6%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G+ D T S +++ + + A L+D++ + F ++ G ++ +A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ + D+M + GC+P +Y TV+ L + + LA + M + I+ V N +I
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 267
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
LCK MD A +F EM N+G PD +TY +LI+ LC G+ +A L +M + +P
Sbjct: 268 LCKYK-HMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL 284
VVT+++LI+ + + EA +L++EM + ++P++FTYSSL++G C +A +
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 285 QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDI 344
++MISK PN+VTYSTL+ G CK +++E +E+ M +GL + Y +I F
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Query: 345 GKYQEAANFLDEMVLGGITPNRLTWSL----------------------------HIRIH 376
A +MV G+ PN LT+++ I +
Sbjct: 447 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 506
Query: 377 NTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVL 435
N +++G+CK ++++ ++ + +S + + Y+++I+ FC+KG ++ ++ ++
Sbjct: 507 NIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Query: 436 DGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
DG LP+ GT++ ++ A +AEL+
Sbjct: 567 DGPLPNSGTYNTLIRARLRDGDREASAELI 596
Score = 205 bits (522), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 209/422 (49%), Gaps = 9/422 (2%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G + D T+ +++ L A LL ++ K K + I+ +I G + DA
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ +F +M G P +Y ++++ L + A R M E I P V + + LI A
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
K G + A K++ EM R PD +TY +LING C ++ EAK +F+ M +K C P
Sbjct: 338 FVK-EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL 284
VVTY++LI G C++K VEE M LF EM +G+ N TY++L+ G + A +
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 285 QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDI 344
+ M+S PNI+TY+ LL+GLCK GKL +A+ + + ++ ++PD Y +I C
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 516
Query: 345 GKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLC-KTDPNRAFQVYLSMRNRSI 403
GK ++ + L G++PN + + NT++ G C K A + M+
Sbjct: 517 GKVEDGWELFCNLSLKGVSPNVIAY-------NTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 404 SVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAE 463
+S TY++LI + GD SA ++ E+ G D T V L D R + +
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLD 629
Query: 464 LL 465
+L
Sbjct: 630 ML 631
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 190/359 (52%), Gaps = 9/359 (2%)
Query: 104 AMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIK 163
A+ V KM + G EP + ++L ++ A M E+G +P + LI
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 164 ALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACS 223
L ++ +A + +M RGC PD TYGT++NGLC+ G I A L K+ME
Sbjct: 197 GLFLHNKASEAV-ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 255
Query: 224 PTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMEL 283
VV Y ++I+GLC+ K +++A+ LF EM +KG+ P+VFTYSSL+ LC G S A L
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 284 LQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCD 343
L MI ++ PN+VT+S L++ KEGKL EA ++ D M + + PD Y +I+ FC
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 344 IGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRAFQVYLSMRNRS 402
+ EA + + M+ PN +T+S T+++G CK +++ M R
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYS-------TLIKGFCKAKRVEEGMELFREMSQRG 428
Query: 403 ISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQA 461
+ +++TY++LI F + D + + ++V G P+ T++ ++ L K+ +A
Sbjct: 429 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 185/364 (50%), Gaps = 9/364 (2%)
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
DA+ +F M + P+ + +L+ + + N+ +L M+ +GI + + ++ I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
C+ S + A + +M G PD T +L+NG C +I +A L +M
Sbjct: 126 NCFCRRS-QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME 282
P T+T+LI+GL EA+ L ++M +G +P++ TY ++++GLCK G A+
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 283 LLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFC 342
LL+ M + ++V Y+T+++GLCK + +A+ + M +G++PD Y +ISC C
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 343 DIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNR 401
+ G++ +A+ L +M+ I PN +T+S ++ K A ++Y M R
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFS-------ALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 402 SISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQA 461
SI D TYSSLI FC + ++ + + ++ C P+ T+S ++ +++ +
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 462 AELL 465
EL
Sbjct: 418 MELF 421
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 167/325 (51%), Gaps = 15/325 (4%)
Query: 153 PCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKE 212
P + N L+ A+ K + + + +M G + D YTY IN CR ++ A
Sbjct: 81 PSIVEFNKLLSAVAKMN-KFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 213 LFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLC 272
+ +M P +VT +SL+NG C SK + +A+ L ++M G +P+ FT+++L+ GL
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 273 KGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAG 332
+S+A+ L+ M+ + +P++VTY T++NGLCK G + A+ +L +M+ ++ D
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 259
Query: 333 LYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCK----TDP 388
+Y II C +A N EM GI P+ T+S +++ LC +D
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS-------SLISCLCNYGRWSDA 312
Query: 389 NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAV 448
+R M R I+ + +T+S+LI F K+G + ++ ++ DE++ PD T+S++
Sbjct: 313 SRLLS---DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Query: 449 MTALWDRRKMRQAAELLLLELMNKC 473
+ ++ +A + L + C
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDC 394
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 160/308 (51%), Gaps = 9/308 (2%)
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTS 231
+D A +F +M P + L++ + ++ K L ++M+T S + TY+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 232 LINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKR 291
IN C+ + A+ + +M G EP++ T SSL++G C S A+ L+ M+
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 292 HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
++P+ T++TL++GL K EAV ++D+M +G +PD YG +++ C G A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 352 NFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTY 410
+ L +M G I + + I+NT++ GLCK + A ++ M N+ I D TY
Sbjct: 244 SLLKKMEKGKIEAD-------VVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 411 SSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELM 470
SSLI+C C G ++R++ +++ P+ T+SA++ A K+ + AE L E++
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE-AEKLYDEMI 355
Query: 471 NKCVEAEV 478
+ ++ ++
Sbjct: 356 KRSIDPDI 363
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 209 bits (531), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 216/403 (53%), Gaps = 9/403 (2%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G R+D TF+++I+ Q A +L ++ K + S+ G+ R +R DA
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ + DKM E G +P +Y ++ L + ++ AF F++ + GI+P V + L+
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
LC +S DAA ++ +M + TP+ TY L++ + GK+ EAKELF+EM + P
Sbjct: 235 LCNSSRWSDAA-RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL 284
+VTY+SLINGLC ++EA ++F+ M SKG +V +Y++L++G CK M+L
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 285 QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDI 344
+ M + N VTY+TL+ G + G + +A E +M G+ PD Y ++ CD
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 345 GKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSI 403
G+ ++A ++M + L I + TV++G+CKT A+ ++ S+ + +
Sbjct: 414 GELEKALVIFEDM-------QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Query: 404 SVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWS 446
D +TY+++++ C KG +H+ + ++ +G + ++ T S
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 189/350 (54%), Gaps = 9/350 (2%)
Query: 104 AMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIK 163
A+ + KM + G EP + +++ N++ A M EIG +P + + N +I
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 164 ALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACS 223
+LCK DA F F+E+ +G P+ TY L+NGLC + +A L +M K +
Sbjct: 199 SLCKTKRVNDA-FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257
Query: 224 PTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMEL 283
P V+TY++L++ ++ V EA LFEEM ++P++ TYSSL++GLC +A ++
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
Query: 284 LQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCD 343
+M+SK ++V+Y+TL+NG CK ++++ +++ M +GL + Y +I F
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 344 IGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKT-DPNRAFQVYLSMRNRS 402
G +A F +M GI+P+ W+ +N ++ GLC + +A ++ M+ R
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPD--IWT-----YNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 403 ISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTAL 452
+ +D +TY+++I CK G + ++ + L L G PD T++ +M+ L
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 170/357 (47%), Gaps = 33/357 (9%)
Query: 153 PCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKE 212
P + N L+ A+ K D + ++M G D YT+ +IN C ++ A
Sbjct: 83 PSIVDFNRLLSAIVKLK-KYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALS 141
Query: 213 LFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLC 272
+ +M P VT SL+NG C+ V +A+ L ++M G +P++ Y++++D LC
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201
Query: 273 KGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAG 332
K + A + + + K RPN+VTY+ L+NGLC + +A +L M + + P+
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261
Query: 333 LYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWS-------LHIRI---------- 375
Y ++ F GK EA +EMV I P+ +T+S LH RI
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 376 -----------HNTVVQGLCKTD-PNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDI 423
+NT++ G CK +++ M R + +++TY++LI F + GD+
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 424 HKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELMNKCVEAEVDI 480
K+ ++ G PD T++ ++ L D ++ +A L++ E M K E ++DI
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA--LVIFEDMQK-REMDLDI 435
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 145/296 (48%), Gaps = 10/296 (3%)
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTS 231
++ A +F +M P + L++ + +L K L K+ME + T+
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 232 LINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKR 291
+IN C V A+ + +M G EP+ T SL++G C+ S A+ L+ M+
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 292 HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
++P+IV Y+ +++ LCK ++ +A + ++ +G++P+ Y +++ C+ ++ +AA
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 352 NFLDEMVLGGITPNRLTWS--LHIRIHNTVVQGLCKTDPNRAFQVYLSMRNRSISVDSLT 409
L +M+ ITPN +T+S L + N V A +++ M SI D +T
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVL--------EAKELFEEMVRMSIDPDIVT 297
Query: 410 YSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
YSSLI C I ++ ++ D +V GCL D +++ ++ +++ +L
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 142/270 (52%), Gaps = 8/270 (2%)
Query: 206 KIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYS 265
K+ +A +LF +M P++V + L++ + + K + + L ++M G+ +++T++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 266 SLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQ 325
+++ C S A+ +L M+ + P+ VT +L+NG C+ ++ +AV ++D+M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 326 GLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCK 385
G KPD Y II C + +A +F E+ GI PN +T++ +V GLC
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYT-------ALVNGLCN 237
Query: 386 TDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGT 444
+ + A ++ M + I+ + +TYS+L+ F K G + ++ + +E+V PD T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 445 WSAVMTALWDRRKMRQAAELLLLELMNKCV 474
+S+++ L ++ +A ++ L + C+
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
>sp|Q3E9F0|PP392_ARATH Pentatricopeptide repeat-containing protein At5g18475
OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1
Length = 506
Score = 208 bits (530), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 234/458 (51%), Gaps = 15/458 (3%)
Query: 13 ITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDL 72
I+ + L++ E+D L IF+ A+ + GF H+N+T+S+++ LV +F + +
Sbjct: 54 ISHESAVSLMKRERDPQGVLDIFNKASQQ--KGFNHNNATYSVLLDNLVRHKKFLAVDAI 111
Query: 73 LDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFG-CEPTPKSYITVLAILV 131
L ++ E C E +FL++ R + R M +F+ ++ +P+ + T L +L+
Sbjct: 112 LHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLI 171
Query: 132 EENQLKLAFRFYRHMRE-IGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCT-P 189
+ ++ L+ + + + +G+QP N+L+K CKN G ++ AF + EM G + P
Sbjct: 172 DSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKN-GDINFAFLVVEEMKRSGISYP 230
Query: 190 DSYTYGTLINGLCRLGKIYEAKELFKEMETK-ACSPTVVTYTSLINGLCQSKSVEEAMRL 248
+S TY TL++ L + EA ELF++M +K SP VT+ +ING C++ VE A ++
Sbjct: 231 NSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKI 290
Query: 249 FEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCK 308
+ M+ G PNV+ YS+LM+G CK G +A + + + + V Y+TL+N C+
Sbjct: 291 LDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCR 350
Query: 309 EGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLT 368
G+ EA+++L MK + D Y I+ G+ +EA LD+ G+ N+ +
Sbjct: 351 NGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGS 410
Query: 369 WSLHIRIHNTVVQGLC-KTDPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSA 427
+ + ++ LC + +A + M R I T++ L+ C+ G
Sbjct: 411 YRI-------ILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGV 463
Query: 428 RIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
R++ + G +P +W AV+ ++ RK+ ELL
Sbjct: 464 RVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELL 501
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 139/319 (43%), Gaps = 38/319 (11%)
Query: 4 KTMFKWSTKITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSA 63
++ + IT + ++ + A +A+ +F+ ++ G D TF++MI+ A
Sbjct: 224 RSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISK--EGISPDPVTFNVMINGFCRA 281
Query: 64 NQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSY 123
+ A+ +LD + K C+ + ++ G+ +V + +A + FD++K+ G + Y
Sbjct: 282 GEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGY 341
Query: 124 ITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMP 183
T L+ C+N G D A K+ EM
Sbjct: 342 TT-----------------------------------LMNCFCRN-GETDEAMKLLGEMK 365
Query: 184 NRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVE 243
C D+ TY ++ GL G+ EA ++ + ++ +Y ++N LC + +E
Sbjct: 366 ASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELE 425
Query: 244 EAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLL 303
+A++ M +G+ P+ T++ L+ LC+ G + + +L + P ++ ++
Sbjct: 426 KAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVV 485
Query: 304 NGLCKEGKLQEAVEILDRM 322
+CKE KL E+LD +
Sbjct: 486 ESICKERKLVHVFELLDSL 504
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 225/450 (50%), Gaps = 30/450 (6%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G+ D F+ +++ L + A +L+DR+ + T ++ G + DA
Sbjct: 153 GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ + D+M E G +P +Y VL ++ + Q LA R M E I+ +++I
Sbjct: 213 VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
LCK+ G++D AF +F EM +G D TY TLI G C G+ + +L ++M + SP
Sbjct: 273 LCKD-GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL 284
VVT++ LI+ + + EA +L +EM +G+ PN TY+SL+DG CK +A++++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 285 QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDI 344
+MISK P+I+T++ L+NG CK ++ + +E+ M L+G+ + Y ++ FC
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 345 GKYQEAANFLDEMVLGGITPNRLTW----------------------------SLHIRIH 376
GK + A EMV + P+ +++ L I I+
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 377 NTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVL 435
++ G+C + A+ ++ S+ + + +D+ Y+ +I+ C+K + K+ + ++
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
Query: 436 DGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
+G PDE T++ ++ A AAEL+
Sbjct: 572 EGHAPDELTYNILIRAHLGDDDATTAAELI 601
Score = 192 bits (487), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 194/363 (53%), Gaps = 7/363 (1%)
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
DA+ +F M + PT + + + + + Q +L + M GI + +L+++I
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
C+ + AF ++ G PD+ + TL+NGLC ++ EA EL M
Sbjct: 131 NCFCR-CRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME 282
PT++T +L+NGLC + V +A+ L + M G +PN TY +++ +CK G ++ AME
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 283 LLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFC 342
LL+ M + + + V YS +++GLCK+G L A + + M+++G K D Y +I FC
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 343 DIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPNRAFQVYLSMRNRS 402
+ G++ + A L +M+ I+PN +T+S + I + V +G + A Q+ M R
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFS--VLIDSFVKEGKLR----EADQLLKEMMQRG 363
Query: 403 ISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAA 462
I+ +++TY+SLI FCK+ + ++ ++VD ++ GC PD T++ ++ ++
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGL 423
Query: 463 ELL 465
EL
Sbjct: 424 ELF 426
Score = 161 bits (408), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 184/380 (48%), Gaps = 12/380 (3%)
Query: 49 DNSTFSLMISKLVSANQFRPAEDLLDRVNKE--KCDITEDIFLSICRGYGRVHRPLDAMR 106
D +S++I L A +L + + + K DI + ++ G+ R D +
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIT--YNTLIGGFCNAGRWDDGAK 319
Query: 107 VFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALC 166
+ M + P ++ ++ V+E +L+ A + + M + GI P + N LI C
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 167 KNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTV 226
K + ++ A ++ M ++GC PD T+ LING C+ +I + ELF+EM +
Sbjct: 380 KEN-RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 227 VTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQM 286
VTY +L+ G CQS +E A +LF+EM S+ V P++ +Y L+DGLC G +A+E+
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 287 MISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGK 346
+ + +I Y +++G+C K+ +A ++ + L+G+K DA Y +IS C
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDS 558
Query: 347 YQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPNRAFQVYLSMRNRSISVD 406
+A +M G P+ LT+++ IR H L D A ++ M++ D
Sbjct: 559 LSKADILFRKMTEEGHAPDELTYNILIRAH------LGDDDATTAAELIEEMKSSGFPAD 612
Query: 407 SLTYSSLITCFCKKGDIHKS 426
T +I G++ KS
Sbjct: 613 VSTVKMVINML-SSGELDKS 631
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 166/336 (49%), Gaps = 9/336 (2%)
Query: 139 AFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLI 198
A +R M + P V N L A+ K + + + ++M ++G YT +I
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAK-TKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 199 NGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVE 258
N CR K+ A ++ P V + +L+NGLC V EA+ L + M G +
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 259 PNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEI 318
P + T ++L++GLC G S A+ L+ M+ +PN VTY +LN +CK G+ A+E+
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 319 LDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNT 378
L +M+ + +K DA Y II C G A N +EM + G + +T+ NT
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY-------NT 303
Query: 379 VVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDG 437
++ G C + ++ M R IS + +T+S LI F K+G + ++ +++ E++ G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 438 CLPDEGTWSAVMTALWDRRKMRQAAELLLLELMNKC 473
P+ T+++++ ++ +A +++ L + C
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Score = 141 bits (356), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 152/294 (51%), Gaps = 8/294 (2%)
Query: 173 DAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSL 232
D A +FR+M P + L + + + + L K+ME+K + ++ T + +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 233 INGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRH 292
IN C+ + + A ++ G EP+ +++L++GLC S+A+EL+ M+ H
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 293 RPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAAN 352
+P ++T +TL+NGLC GK+ +AV ++DRM G +P+ YG +++ C G+ A
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 353 FLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYS 411
L +M I + + +S+ ++ GLCK + AF ++ M + D +TY+
Sbjct: 250 LLRKMEERNIKLDAVKYSI-------IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 412 SLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
+LI FC G A+++ +++ P+ T+S ++ + K+R+A +LL
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 113/275 (41%), Gaps = 34/275 (12%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G + T++ +I N+ A ++D + + CD F + GY + +R D
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ +F +M G +Y T++ + +L++A + ++ M ++P + S +L+
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 165 LCKN----------------------------------SGTMDAAFKIFREMPNRGCTPD 190
LC N + +D A+ +F +P +G D
Sbjct: 483 LCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLD 542
Query: 191 SYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFE 250
+ Y +I+ LCR + +A LF++M + +P +TY LI A L E
Sbjct: 543 ARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIE 602
Query: 251 EMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQ 285
EM+S G +V T +++ L G +++L
Sbjct: 603 EMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLS 637
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 205 bits (522), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 128/422 (30%), Positives = 213/422 (50%), Gaps = 9/422 (2%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G + D T+ +I+ L + A +LL+++ K K + I+ ++ + DA
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ +F +M G P +Y ++++ L + A R M E I P V + N LI A
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
K G + A K+F EM R P+ TY +LING C ++ EA+++F M +K C P
Sbjct: 320 FAK-EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL 284
VVTY +LING C++K V + M LF +M +G+ N TY++L+ G + A +
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 285 QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDI 344
+ M+S PNI+TY+TLL+GLCK GKL++A+ + + ++ ++PD Y + C
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 345 GKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRAFQVYLSMRNRSI 403
GK ++ + + L G+ P+ + + NT++ G CK A+ +++ M+
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAY-------NTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 404 SVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAE 463
DS TY++LI + GD SA ++ E+ D T+ V L D R + E
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLE 611
Query: 464 LL 465
+L
Sbjct: 612 VL 613
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 201/383 (52%), Gaps = 12/383 (3%)
Query: 104 AMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIK 163
A+ + KM + G P+ + ++L N++ A M E+G QP + L+
Sbjct: 119 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 178
Query: 164 ALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACS 223
L +++ +A + R M +GC PD TYG +INGLC+ G+ A L +ME
Sbjct: 179 GLFQHNKASEAVALVER-MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 237
Query: 224 PTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMEL 283
VV Y+++I+ LC+ + V++A+ LF EM +KG+ P+VFTYSSL+ LC G S A L
Sbjct: 238 ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 297
Query: 284 LQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCD 343
L M+ ++ PN+VT+++L++ KEGKL EA ++ D M + + P+ Y +I+ FC
Sbjct: 298 LSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357
Query: 344 IGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRS 402
+ EA MV P+ +T+ NT++ G CK +++ M R
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTY-------NTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 403 ISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAA 462
+ +++TY++LI F + D + + ++V DG P+ T++ ++ L K+ +A
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA- 469
Query: 463 ELLLLELMNKCVEAEVDIQNQDV 485
+++ E + K + E DI ++
Sbjct: 470 -MVVFEYLQKS-KMEPDIYTYNI 490
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 227/492 (46%), Gaps = 65/492 (13%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G H+ T+++MI+ L +Q A +L ++ K + S+ G+ +R +A
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ + D+M E G +P ++ T++ L + N+ A M G QP + + +I
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 165 LCKNSGT----------------------------------MDAAFKIFREMPNRGCTPD 190
LCK +D A +F EM N+G PD
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 191 SYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFE 250
+TY +LI+ LC G+ +A L +M + +P VVT+ SLI+ + + EA +LF+
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 251 EMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEG 310
EM + ++PN+ TY+SL++G C +A ++ +M+SK P++VTY+TL+NG CK
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394
Query: 311 KLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWS 370
K+ + +E+ M +GL + Y +I F A +MV G+ PN +T++
Sbjct: 395 KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYN 454
Query: 371 L----------------------------HIRIHNTVVQGLCKTDP-NRAFQVYLSMRNR 401
I +N + +G+CK + ++ S+ +
Sbjct: 455 TLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK 514
Query: 402 SISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQA 461
+ D + Y+++I+ FCKKG ++ + ++ DG LPD GT++ ++ A R +A
Sbjct: 515 GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA--HLRDGDKA 572
Query: 462 AELLLLELMNKC 473
A L++ M C
Sbjct: 573 ASAELIKEMRSC 584
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 189/370 (51%), Gaps = 10/370 (2%)
Query: 98 VHRPLD-AMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVA 156
+H LD A+ +F +M + P+ + +L+ + + + L F M +G+ +
Sbjct: 42 LHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLY 101
Query: 157 SLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKE 216
+ N++I LC+ S + A I +M G P T +L+NG C +I EA L +
Sbjct: 102 TYNIMINCLCRRS-QLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 217 METKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGC 276
M P VT+T+L++GL Q EA+ L E M KG +P++ TY ++++GLCK G
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 277 SSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGK 336
A+ LL M + ++V YST+++ LCK + +A+ + M +G++PD Y
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 337 IISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVY 395
+ISC C+ G++ +A+ L +M+ I PN +T+ N+++ K A +++
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTF-------NSLIDAFAKEGKLIEAEKLF 333
Query: 396 LSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDR 455
M RSI + +TY+SLI FC + ++ +I +V CLPD T++ ++
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 456 RKMRQAAELL 465
+K+ EL
Sbjct: 394 KKVVDGMELF 403
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 164/313 (52%), Gaps = 9/313 (2%)
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTS 231
+D A +F EM P + L++ + ++ K ++ME S + TY
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 232 LINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKR 291
+IN LC+ + A+ + +M G P++ T +SL++G C G S+A+ L+ M+
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 292 HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
++P+ VT++TL++GL + K EAV +++RM ++G +PD YG +I+ C G+ A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 352 NFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCK-TDPNRAFQVYLSMRNRSISVDSLTY 410
N L++M G I + + I++TV+ LCK + A ++ M N+ I D TY
Sbjct: 226 NLLNKMEKGKIEAD-------VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 411 SSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELM 470
SSLI+C C G ++R++ +++ P+ T+++++ A K+ + AE L E++
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE-AEKLFDEMI 337
Query: 471 NKCVEAEVDIQNQ 483
+ ++ + N
Sbjct: 338 QRSIDPNIVTYNS 350
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 202 bits (514), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 211/415 (50%), Gaps = 9/415 (2%)
Query: 52 TFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKM 111
T+ ++++ L A +LL+++ K + IF +I + DA+ +F +M
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 112 KEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGT 171
+ G P +Y ++++ L + A + M E I P + + N LI A K G
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK-EGK 345
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTS 231
A K++ +M R PD +TY +L+NG C ++ +AK++F+ M +K C P VVTY +
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 232 LINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKR 291
LI G C+SK VE+ LF EM +G+ + TY++L+ GL G A ++ + M+S
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 292 HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
P+I+TYS LL+GLC GKL++A+E+ D M+ +K D +Y +I C GK +
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 352 NFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLC-KTDPNRAFQVYLSMRNRSISVDSLTY 410
+ + L G+ PN +T+ NT++ GLC K A+ + M+ +S TY
Sbjct: 526 DLFCSLSLKGVKPNVVTY-------NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 411 SSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
++LI + GD SA ++ E+ + D T V L D R + ++L
Sbjct: 579 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDML 633
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 200/378 (52%), Gaps = 12/378 (3%)
Query: 104 AMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIK 163
A+ + KM + G EP+ + ++L ++ A M E+G +P + LI
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 164 ALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACS 223
L ++ +A + R M RGC P+ TYG ++NGLC+ G A L +ME
Sbjct: 199 GLFLHNKASEAVALVDR-MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 257
Query: 224 PTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMEL 283
VV + ++I+ LC+ + V++A+ LF+EM +KG+ PNV TYSSL+ LC G S A +L
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 284 LQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCD 343
L MI K+ PN+VT++ L++ KEGK EA ++ D M + + PD Y +++ FC
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Query: 344 IGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRAFQVYLSMRNRS 402
+ +A + MV P+ +T+ NT+++G CK+ +++ M +R
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTY-------NTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 403 ISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAA 462
+ D++TY++LI GD + ++ ++V DG PD T+S ++ L + K+ +A
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 463 ELLLLELMNKCVEAEVDI 480
E + + M K E ++DI
Sbjct: 491 E--VFDYMQKS-EIKLDI 505
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 215/453 (47%), Gaps = 42/453 (9%)
Query: 48 HDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRV 107
H T++++I+ +Q A LL ++ K + + S+ GY R DA+ +
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 108 FDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCK 167
D+M E G P ++ T++ L N+ A M + G QP + + V++ LCK
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 168 NSGT----------------------------------MDAAFKIFREMPNRGCTPDSYT 193
T +D A +F+EM +G P+ T
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297
Query: 194 YGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMR 253
Y +LI+ LC G+ +A +L +M K +P +VT+ +LI+ + EA +L+++M
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 254 SKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQ 313
+ ++P++FTY+SL++G C +A ++ + M+SK P++VTY+TL+ G CK +++
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417
Query: 314 EAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHI 373
+ E+ M +GL D Y +I G A +MV G+ P+ +T+S+
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI-- 475
Query: 374 RIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDE 432
++ GLC +A +V+ M+ I +D Y+++I CK G + +
Sbjct: 476 -----LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530
Query: 433 LVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
L L G P+ T++ +++ L +R +++A LL
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Score = 168 bits (426), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 181/364 (49%), Gaps = 9/364 (2%)
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
DA+ +F M + P+ + +L+ + + + + M+ + I + + N+LI
Sbjct: 68 DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 127
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
C+ S + A + +M G P T +L+NG C +I +A L +M
Sbjct: 128 NCFCRRS-QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME 282
P +T+T+LI+GL EA+ L + M +G +PN+ TY +++GLCK G + A+
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 283 LLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFC 342
LL M + + ++V ++T+++ LCK + +A+ + M+ +G++P+ Y +ISC C
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 343 DIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPN-RAFQVYLSMRNR 401
G++ +A+ L +M+ I PN +T+ N ++ K A ++Y M R
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTF-------NALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 402 SISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQA 461
SI D TY+SL+ FC + K+ ++ + +V C PD T++ ++ +++
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 462 AELL 465
EL
Sbjct: 420 TELF 423
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 179/332 (53%), Gaps = 4/332 (1%)
Query: 26 KDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITE 85
+ V+ AL +F + G R + T+S +IS L S ++ A LL + ++K +
Sbjct: 274 RHVDDALNLFKEMETK---GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 86 DIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRH 145
F ++ + + + ++A +++D M + +P +Y +++ ++L A + +
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 146 MREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLG 205
M P V + N LIK CK+ D ++FREM +RG D+ TY TLI GL G
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGT-ELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Query: 206 KIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYS 265
A+++FK+M + P ++TY+ L++GLC + +E+A+ +F+ M+ ++ +++ Y+
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 509
Query: 266 SLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQ 325
++++G+CK G +L + K +PN+VTY+T+++GLC + LQEA +L +MK
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 569
Query: 326 GLKPDAGLYGKIISCFCDIGKYQEAANFLDEM 357
G P++G Y +I G +A + EM
Sbjct: 570 GPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 135 bits (339), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 148/294 (50%), Gaps = 8/294 (2%)
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTS 231
+D A +F M P + L++ + ++ K L ++M+ + TY
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 232 LINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKR 291
LIN C+ + A+ L +M G EP++ T SSL++G C G S A+ L+ M+
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 292 HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
+RP+ +T++TL++GL K EAV ++DRM +G +P+ YG +++ C G A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 352 NFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCK-TDPNRAFQVYLSMRNRSISVDSLTY 410
N L++M I + + I NT++ LCK + A ++ M + I + +TY
Sbjct: 246 NLLNKMEAAKIEAD-------VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 411 SSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAEL 464
SSLI+C C G +++++ +++ P+ T++A++ A K +A +L
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Score = 112 bits (279), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 135/270 (50%), Gaps = 9/270 (3%)
Query: 197 LINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKG 256
L NGL + K+ +A LF M P++V + L++ + + K + + L E+M+
Sbjct: 57 LRNGLHDM-KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLE 115
Query: 257 VEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAV 316
+ ++TY+ L++ C+ S A+ LL M+ + P+IVT S+LLNG C ++ +AV
Sbjct: 116 IVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 317 EILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIH 376
++D+M G +PD + +I K EA +D MV G PN +T+ +
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV----- 230
Query: 377 NTVVQGLCK-TDPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVL 435
VV GLCK D + A + M I D + ++++I CK + + + E+
Sbjct: 231 --VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 436 DGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
G P+ T+S++++ L + A++LL
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/431 (29%), Positives = 215/431 (49%), Gaps = 14/431 (3%)
Query: 51 STFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDI--FLSICRGYGRVHRPLDAMRVF 108
++++++I + + + A LL + E T D+ + ++ GY R ++
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLL--LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 109 DKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKN 168
+ MK G +P Y +++ +L +L A + M GI P LI CK
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 169 SGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVT 228
G + AA K F EM +R TPD TY +I+G C++G + EA +LF EM K P VT
Sbjct: 365 -GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 229 YTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMI 288
+T LING C++ +++A R+ M G PNV TY++L+DGLCK G A ELL M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 289 SKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQ 348
+PNI TY++++NGLCK G ++EAV+++ + GL D Y ++ +C G+
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 349 EAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPNRAFQVYLS-MRNRSISVDS 407
+A L EM+ G+ P +T+ N ++ G C + L+ M + I+ ++
Sbjct: 544 KAQEILKEMLGKGLQPTIVTF-------NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 408 LTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLL 467
T++SL+ +C + ++ + I ++ G PD T+ ++ R M++A L
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW-FLFQ 655
Query: 468 ELMNKCVEAEV 478
E+ K V
Sbjct: 656 EMKGKGFSVSV 666
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 209/434 (48%), Gaps = 14/434 (3%)
Query: 23 RAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCD 82
R + +V + V F + D F + LV R A + +++
Sbjct: 148 RPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLV 207
Query: 83 ITED---IFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLA 139
++ D ++L+ R ++ A+ VF + E G SY V+ + + ++K A
Sbjct: 208 LSVDSCNVYLT--RLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEA 265
Query: 140 FRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLIN 199
M G P V S + ++ C+ G +D +K+ M +G P+SY YG++I
Sbjct: 266 HHLLLLMELKGYTPDVISYSTVVNGYCR-FGELDKVWKLIEVMKRKGLKPNSYIYGSIIG 324
Query: 200 GLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEP 259
LCR+ K+ EA+E F EM + P V YT+LI+G C+ + A + F EM S+ + P
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 260 NVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEIL 319
+V TY++++ G C+ G +A +L M K P+ VT++ L+NG CK G +++A +
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 320 DRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTV 379
+ M G P+ Y +I C G A L EM G+ PN T+ N++
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY-------NSI 497
Query: 380 VQGLCKT-DPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGC 438
V GLCK+ + A ++ ++ D++TY++L+ +CK G++ K+ I+ E++ G
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 439 LPDEGTWSAVMTAL 452
P T++ +M
Sbjct: 558 QPTIVTFNVLMNGF 571
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 198/396 (50%), Gaps = 32/396 (8%)
Query: 112 KEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGT 171
K++G +P + + +LV+ L+ A R + M G+ V S NV + L K+
Sbjct: 169 KDWGSDP--RVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYK 226
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTS 231
A +FRE P G + +Y +I+ +C+LG+I EA L ME K +P V++Y++
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 286
Query: 232 LINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKR 291
++NG C+ +++ +L E M+ KG++PN + Y S++ LC+ ++A E MI +
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 292 HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
P+ V Y+TL++G CK G ++ A + M + + PD Y IIS FC IG EA
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 352 NFLDEMVLGGITPNRLTWSLHI-------------RIHN---------------TVVQGL 383
EM G+ P+ +T++ I R+HN T++ GL
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 384 CKT-DPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDE 442
CK D + A ++ M + + TY+S++ CK G+I ++ ++V E G D
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 443 GTWSAVMTALWDRRKMRQAAELLLLELMNKCVEAEV 478
T++ +M A +M +A E +L E++ K ++ +
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQE-ILKEMLGKGLQPTI 561
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 178/365 (48%), Gaps = 13/365 (3%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDI--FLSICRGYGRVHRPL 102
G D ++ +I R A ++ DIT D+ + +I G+ ++ +
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR--DITPDVLTYTAIISGFCQIGDMV 403
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
+A ++F +M G EP ++ ++ + +K AFR + HM + G P V + LI
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
LCK G +D+A ++ EM G P+ +TY +++NGLC+ G I EA +L E E
Sbjct: 464 DGLCK-EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME 282
+ VTYT+L++ C+S +++A + +EM KG++P + T++ LM+G C G +
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 283 LLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFC 342
LL M++K PN T+++L+ C L+ A I M +G+ PD Y ++ C
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 343 DIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPN-RAFQVYLSMRNR 401
+EA EM G +S+ + ++ +++G K A +V+ MR
Sbjct: 643 KARNMKEAWFLFQEMKGKG-------FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 402 SISVD 406
++ D
Sbjct: 696 GLAAD 700
Score = 155 bits (391), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 152/318 (47%), Gaps = 1/318 (0%)
Query: 49 DNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVF 108
D T++ +IS A L + + + F + GY + DA RV
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 109 DKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKN 168
+ M + GC P +Y T++ L +E L A M +IG+QP + + N ++ LCK
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK- 503
Query: 169 SGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVT 228
SG ++ A K+ E G D+ TY TL++ C+ G++ +A+E+ KEM K PT+VT
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 229 YTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMI 288
+ L+NG C +E+ +L M +KG+ PN T++SL+ C A + + M
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 289 SKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQ 348
S+ P+ TY L+ G CK ++EA + MK +G Y +I F K+
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 349 EAANFLDEMVLGGITPNR 366
EA D+M G+ ++
Sbjct: 684 EAREVFDQMRREGLAADK 701
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 1/230 (0%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G + + T++ +++ L + A L+ + + ++ Y + A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ +M G +PT ++ ++ L+ + M GI P + N L+K
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
C + + AA I+++M +RG PD TY L+ G C+ + EA LF+EM+ K S
Sbjct: 606 YCIRN-NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV 664
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKG 274
+V TY+ LI G + K EA +F++MR +G+ + + D KG
Sbjct: 665 SVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKG 714
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 192/358 (53%), Gaps = 18/358 (5%)
Query: 110 KMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNS 169
K+ C+P ++ L++EN+ Y+ M IQP V + NV+I ALCK +
Sbjct: 185 KLSALSCKP-------LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCK-T 236
Query: 170 GTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLG---KIYEAKELFKEMETKACSPTV 226
G M+ A + +M GC+P+ +Y TLI+G C+LG K+Y+A + KEM SP +
Sbjct: 237 GKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNL 296
Query: 227 VTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQM 286
T+ LI+G + ++ +M++F+EM + V+PNV +Y+SL++GLC GG S+A+ +
Sbjct: 297 TTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDK 356
Query: 287 MISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGK 346
M+S +PN++TY+ L+NG CK L+EA+++ +K QG P +Y +I +C +GK
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Query: 347 YQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPNRAFQVYLSMRNRSISVD 406
+ +EM GI P+ + +N ++ GLC+ A + D
Sbjct: 417 IDDGFALKEEMEREGIVPD-------VGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPD 469
Query: 407 SLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAEL 464
+T+ L+ +C+KG+ K+A ++ E+ G P T++ VM ++ A +
Sbjct: 470 LVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNM 527
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 149/269 (55%), Gaps = 3/269 (1%)
Query: 104 AMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIK 163
+M+VF +M + +P SY +++ L ++ A M G+QP + + N LI
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374
Query: 164 ALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACS 223
CKN + A +F + +G P + Y LI+ C+LGKI + L +EME +
Sbjct: 375 GFCKND-MLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 224 PTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMEL 283
P V TY LI GLC++ ++E A +LF+++ SKG+ P++ T+ LM+G C+ G S +A L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAML 492
Query: 284 LQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRM-KLQGLKPDAGLYGKIISCFC 342
L+ M +P +TY+ ++ G CKEG L+ A + +M K + L+ + Y ++ +
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYS 552
Query: 343 DIGKYQEAANFLDEMVLGGITPNRLTWSL 371
GK ++A L+EM+ G+ PNR+T+ +
Sbjct: 553 QKGKLEDANMLLNEMLEKGLVPNRITYEI 581
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 169/325 (52%), Gaps = 15/325 (4%)
Query: 154 CVASL--NVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAK 211
CV S+ ++L+ A NS + F+ F+ G + + L+ L + + + +
Sbjct: 150 CVNSIIADMLVLAYANNS-RFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVE 208
Query: 212 ELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGL 271
++KEM + P V T+ +IN LC++ + +A + E+M+ G PNV +Y++L+DG
Sbjct: 209 YVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGY 268
Query: 272 CKGGCSS---QAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLK 328
CK G + +A +L+ M+ PN+ T++ L++G K+ L ++++ M Q +K
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVK 328
Query: 329 PDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP 388
P+ Y +I+ C+ GK EA + D+MV G+ PN +T+ N ++ G CK D
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITY-------NALINGFCKNDM 381
Query: 389 -NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSA 447
A ++ S++ + + Y+ LI +CK G I + +E+ +G +PD GT++
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 448 VMTALWDRRKMRQAAELLLLELMNK 472
++ L R +AA+ L +L +K
Sbjct: 442 LIAGLC-RNGNIEAAKKLFDQLTSK 465
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 145/289 (50%), Gaps = 11/289 (3%)
Query: 51 STFSLMISKLVSANQF----RPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMR 106
+TF+++I + + +++LD+ K + +C G G++ +A+
Sbjct: 297 TTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNG-GKIS---EAIS 352
Query: 107 VFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALC 166
+ DKM G +P +Y ++ + + LK A + ++ G P N+LI A C
Sbjct: 353 MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC 412
Query: 167 KNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTV 226
K G +D F + EM G PD TY LI GLCR G I AK+LF ++ +K P +
Sbjct: 413 K-LGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDL 470
Query: 227 VTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMEL-LQ 285
VT+ L+ G C+ +A L +EM G++P TY+ +M G CK G A + Q
Sbjct: 471 VTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQ 530
Query: 286 MMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLY 334
M +R R N+ +Y+ LL G ++GKL++A +L+ M +GL P+ Y
Sbjct: 531 MEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 222/423 (52%), Gaps = 21/423 (4%)
Query: 49 DNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCD---ITEDIFL-SIC-RGYGRVHRPLD 103
D ++ +I+ N+ A +LDR+ + +T +I + S+C RG LD
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG------KLD 210
Query: 104 -AMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
A++V +++ C+PT +Y ++ + E + A + M G++P + + N +I
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
+ +CK G +D AF++ R + +GC PD +Y L+ L GK E ++L +M ++ C
Sbjct: 271 RGMCK-EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME 282
P VVTY+ LI LC+ +EEAM L + M+ KG+ P+ ++Y L+ C+ G A+E
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 283 LLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFC 342
L+ MIS P+IV Y+T+L LCK GK +A+EI ++ G P++ Y + S
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 343 DIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRAFQVYLSMRNR 401
G A + + EM+ GI P+ +T+ N+++ LC+ + AF++ + MR+
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITY-------NSMISCLCREGMVDEAFELLVDMRSC 502
Query: 402 SISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQA 461
+TY+ ++ FCK I + +++ +V +GC P+E T++ ++ + +A
Sbjct: 503 EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEA 562
Query: 462 AEL 464
EL
Sbjct: 563 MEL 565
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 198/396 (50%), Gaps = 11/396 (2%)
Query: 86 DIFL--SICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFY 143
D+F ++ G+ +++R DA RV D+M+ P +Y ++ L +L LA +
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 144 RHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCR 203
+ QP V + +LI+A G +D A K+ EM +RG PD +TY T+I G+C+
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGG-VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 204 LGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFT 263
G + A E+ + +E K C P V++Y L+ L EE +L +M S+ +PNV T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 264 YSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMK 323
YS L+ LC+ G +AM LL++M K P+ +Y L+ C+EG+L A+E L+ M
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 324 LQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGL 383
G PD Y +++ C GK +A ++ G +PN ++ NT+ L
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY-------NTMFSAL 448
Query: 384 CKT-DPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDE 442
+ D RA + L M + I D +TY+S+I+C C++G + ++ ++ ++ P
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508
Query: 443 GTWSAVMTALWDRRKMRQAAELLLLELMNKCVEAEV 478
T++ V+ ++ A +L + N C E
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNET 544
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 202/377 (53%), Gaps = 10/377 (2%)
Query: 91 ICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIG 150
+ +G+ + A+RV + +++FG +P +Y ++ + N++ A R MR
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 188
Query: 151 IQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEA 210
P + N++I +LC + G +D A K+ ++ + C P TY LI G + EA
Sbjct: 189 FSPDTVTYNIMIGSLC-SRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEA 247
Query: 211 KELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDG 270
+L EM ++ P + TY ++I G+C+ V+ A + + KG EP+V +Y+ L+
Sbjct: 248 LKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRA 307
Query: 271 LCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPD 330
L G + +L+ M S++ PN+VTYS L+ LC++GK++EA+ +L MK +GL PD
Sbjct: 308 LLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367
Query: 331 AGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKT-DPN 389
A Y +I+ FC G+ A FL+ M+ G P+ + + NTV+ LCK +
Sbjct: 368 AYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNY-------NTVLATLCKNGKAD 420
Query: 390 RAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVM 449
+A +++ + S +S +Y+++ + GD ++ ++ E++ +G PDE T+++++
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMI 480
Query: 450 TALWDRRKMRQAAELLL 466
+ L + +A ELL+
Sbjct: 481 SCLCREGMVDEAFELLV 497
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 172/351 (49%), Gaps = 10/351 (2%)
Query: 11 TKITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAE 70
T IT +++ E V++AL + D + G + D T++ +I + A
Sbjct: 227 TVITYTILIEATMLEGGVDEALKLMDEMLSR---GLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 71 DLLDRVNKEKCD---ITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVL 127
+++ + + C+ I+ +I L G+ + ++ KM C+P +Y ++
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWE---EGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 128 AILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGC 187
L + +++ A + M+E G+ P S + LI A C+ G +D A + M + GC
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCR-EGRLDVAIEFLETMISDGC 399
Query: 188 TPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMR 247
PD Y T++ LC+ GK +A E+F ++ CSP +Y ++ + L S A+
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459
Query: 248 LFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLC 307
+ EM S G++P+ TY+S++ LC+ G +A ELL M S P++VTY+ +L G C
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519
Query: 308 KEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMV 358
K ++++A+ +L+ M G +P+ Y +I G EA +++V
Sbjct: 520 KAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 152/326 (46%), Gaps = 30/326 (9%)
Query: 169 SGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVT 228
SG + + M +G PD LI G L I +A + + +E K P V
Sbjct: 102 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILE-KFGQPDVFA 160
Query: 229 YTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMI 288
Y +LING C+ +++A R+ + MRSK P+ TY+ ++ LC G A+++L ++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 289 SKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQ 348
S +P ++TY+ L+ EG + EA++++D M +GLKPD Y II C G
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 349 EAANFLDEMVLGGITPNRLTWSLHIR----------------------------IHNTVV 380
A + + L G P+ +++++ +R ++ ++
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 381 QGLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCL 439
LC+ A + M+ + ++ D+ +Y LI FC++G + + ++ ++ DGCL
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 440 PDEGTWSAVMTALWDRRKMRQAAELL 465
PD ++ V+ L K QA E+
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIF 426
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 123/237 (51%), Gaps = 7/237 (2%)
Query: 237 CQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNI 296
C+S + E++ L E M KG P+V + L+ G +A+ +++++ K +P++
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEIL-EKFGQPDV 158
Query: 297 VTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDE 356
Y+ L+NG CK ++ +A +LDRM+ + PD Y +I C GK A L++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 357 MVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPNRAFQVYLSMRNRSISVDSLTYSSLITC 416
++ P +T++ I I T+++G + A ++ M +R + D TY+++I
Sbjct: 219 LLSDNCQPTVITYT--ILIEATMLEG----GVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 417 FCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELMNKC 473
CK+G + ++ +V L L GC PD +++ ++ AL ++ K + +L+ KC
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 230/463 (49%), Gaps = 14/463 (3%)
Query: 6 MFKWSTKITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQ 65
M + ++ VL+L+++EK+ A +FDSAT G+ H + ++ +L
Sbjct: 1 MVVFPKSLSPKHVLKLLKSEKNPRAAFALFDSATRH--PGYAHSAVVYHHILRRLSETRM 58
Query: 66 FRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKE-FGCEPTPKSYI 124
+++ + ++C ED+ LS+ + YG+ P A+ VF +M+E FGCEP +SY
Sbjct: 59 VNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYN 118
Query: 125 TVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPN 184
T+L VE Q + + G+ P + + NVLIK CK + A M
Sbjct: 119 TLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKK-EFEKARGFLDWMWK 177
Query: 185 RGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEE 244
G PD ++Y T+IN L + GK+ +A ELF EM + +P V Y LI+G + K +
Sbjct: 178 EGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKT 237
Query: 245 AMRLFEE-MRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLL 303
AM L++ + V PNV T++ ++ GL K G +++ + M ++ TYS+L+
Sbjct: 238 AMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLI 297
Query: 304 NGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGIT 363
+GLC G + +A + + + + D Y ++ FC GK +E+ + L I
Sbjct: 298 HGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKES------LELWRIM 351
Query: 364 PNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGD 422
++ S++I +N +++GL + + A ++ M + + D TY I C G
Sbjct: 352 EHKN--SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGY 409
Query: 423 IHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
++K+ ++ E+ G D +++++ L ++++ +A+ L+
Sbjct: 410 VNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Score = 168 bits (425), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 209/435 (48%), Gaps = 16/435 (3%)
Query: 52 TFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFL--SICRGYGRVHRPLDAMRVFD 109
T++++I +F A LD + KE D+F ++ + + DA+ +FD
Sbjct: 151 TYNVLIKMSCKKKEFEKARGFLDWMWKE--GFKPDVFSYSTVINDLAKAGKLDDALELFD 208
Query: 110 KMKEFGCEPTPKSYITVLAILVEENQLKLAFRFY-RHMREIGIQPCVASLNVLIKALCKN 168
+M E G P Y ++ ++E K A + R + + + P V + N++I L K
Sbjct: 209 EMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSK- 267
Query: 169 SGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVT 228
G +D KI+ M D YTY +LI+GLC G + +A+ +F E++ + S VVT
Sbjct: 268 CGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVT 327
Query: 229 YTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMI 288
Y +++ G C+ ++E++ L+ M K N+ +Y+ L+ GL + G +A + ++M
Sbjct: 328 YNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMP 386
Query: 289 SKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQ 348
+K + + TY ++GLC G + +A+ ++ ++ G D Y II C C + +
Sbjct: 387 AKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLE 446
Query: 349 EAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPNRAFQVYL-SMRNRSISVDS 407
EA+N + EM G+ N + N ++ GL + +L M
Sbjct: 447 EASNLVKEMSKHGVELNS-------HVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTV 499
Query: 408 LTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLL 467
++Y+ LI CK G +++ V E++ +G PD T+S ++ L RK+ A E L
Sbjct: 500 VSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALE-LWH 558
Query: 468 ELMNKCVEAEVDIQN 482
+ + +E +V + N
Sbjct: 559 QFLQSGLETDVMMHN 573
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 207/445 (46%), Gaps = 18/445 (4%)
Query: 25 EKDVNKALVIFD---SATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKC 81
EKD A+ ++D ++ Y N H+ +MIS L + + +R+ + +
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPNVKTHN-----IMISGLSKCGRVDDCLKIWERMKQNER 286
Query: 82 DITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFR 141
+ + S+ G A VF+++ E +Y T+L ++K +
Sbjct: 287 EKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLE 346
Query: 142 FYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGL 201
+R M E + S N+LIK L +N G +D A I+R MP +G D TYG I+GL
Sbjct: 347 LWRIM-EHKNSVNIVSYNILIKGLLEN-GKIDEATMIWRLMPAKGYAADKTTYGIFIHGL 404
Query: 202 CRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNV 261
C G + +A + +E+E+ V Y S+I+ LC+ K +EEA L +EM GVE N
Sbjct: 405 CVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNS 464
Query: 262 FTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDR 321
++L+ GL + +A L+ M RP +V+Y+ L+ GLCK GK EA +
Sbjct: 465 HVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKE 524
Query: 322 MKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQ 381
M G KPD Y ++ C K A + + G+ + + +HN ++
Sbjct: 525 MLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETD-------VMMHNILIH 577
Query: 382 GLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLP 440
GLC + A V +M +R+ + + +TY++L+ F K GD +++ I + G P
Sbjct: 578 GLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQP 637
Query: 441 DEGTWSAVMTALWDRRKMRQAAELL 465
D +++ +M L R + A E
Sbjct: 638 DIISYNTIMKGLCMCRGVSYAMEFF 662
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 132/271 (48%), Gaps = 1/271 (0%)
Query: 104 AMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIK 163
A+ V +++ G +Y +++ L ++ +L+ A + M + G++ N LI
Sbjct: 413 ALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIG 472
Query: 164 ALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACS 223
L ++S +A+F REM GC P +Y LI GLC+ GK EA KEM
Sbjct: 473 GLIRDSRLGEASF-FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWK 531
Query: 224 PTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMEL 283
P + TY+ L+ GLC+ + ++ A+ L+ + G+E +V ++ L+ GLC G AM +
Sbjct: 532 PDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTV 591
Query: 284 LQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCD 343
+ M + N+VTY+TL+ G K G A I M GL+PD Y I+ C
Sbjct: 592 MANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCM 651
Query: 344 IGKYQEAANFLDEMVLGGITPNRLTWSLHIR 374
A F D+ GI P TW++ +R
Sbjct: 652 CRGVSYAMEFFDDARNHGIFPTVYTWNILVR 682
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 134/279 (48%), Gaps = 4/279 (1%)
Query: 28 VNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDI 87
VNKAL + + +G D ++ +I L + A +L+ ++K ++ +
Sbjct: 410 VNKALGVMQEVES---SGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHV 466
Query: 88 FLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMR 147
++ G R R +A +M + GC PT SY ++ L + + A F + M
Sbjct: 467 CNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEML 526
Query: 148 EIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKI 207
E G +P + + ++L+ LC++ +D A +++ + G D + LI+GLC +GK+
Sbjct: 527 ENGWKPDLKTYSILLCGLCRDR-KIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKL 585
Query: 208 YEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSL 267
+A + ME + C+ +VTY +L+ G + A ++ M G++P++ +Y+++
Sbjct: 586 DDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTI 645
Query: 268 MDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGL 306
M GLC S AME + P + T++ L+ +
Sbjct: 646 MKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 209/415 (50%), Gaps = 9/415 (2%)
Query: 52 TFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKM 111
T+ ++++ L A +LL+++ K + IF +I + DA+ +F +M
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 112 KEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGT 171
+ G P +Y ++++ L + A + M E I P + + N LI A K G
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK-EGK 270
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTS 231
A K+ +M R PD +TY +LING C ++ +AK++F+ M +K C P + TY +
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 232 LINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKR 291
LI G C+SK VE+ LF EM +G+ + TY++L+ GL G A ++ + M+S
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 292 HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
P+I+TYS LL+GLC GKL++A+E+ D M+ +K D +Y +I C GK +
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 352 NFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLC-KTDPNRAFQVYLSMRNRSISVDSLTY 410
+ + L G+ PN +T+ NT++ GLC K A+ + M+ DS TY
Sbjct: 451 DLFCSLSLKGVKPNVVTY-------NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Query: 411 SSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
++LI + GD SA ++ E+ + D T V L D R + ++L
Sbjct: 504 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDML 558
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 200/378 (52%), Gaps = 12/378 (3%)
Query: 104 AMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIK 163
A+ + KM + G EP+ + ++L ++ A M E+G +P + LI
Sbjct: 64 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 123
Query: 164 ALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACS 223
L ++ +A + R M RGC P+ TYG ++NGLC+ G I A L +ME
Sbjct: 124 GLFLHNKASEAVALVDR-MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 182
Query: 224 PTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMEL 283
VV + ++I+ LC+ + V++A+ LF+EM +KG+ PNV TYSSL+ LC G S A +L
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 284 LQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCD 343
L MI K+ PN+VT++ L++ KEGK EA ++ D M + + PD Y +I+ FC
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 344 IGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRAFQVYLSMRNRS 402
+ +A + MV P+ T+ NT+++G CK+ +++ M +R
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDTY-------NTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 403 ISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAA 462
+ D++TY++LI GD + ++ ++V DG PD T+S ++ L + K+ +A
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415
Query: 463 ELLLLELMNKCVEAEVDI 480
E + + M K E ++DI
Sbjct: 416 E--VFDYMQKS-EIKLDI 430
Score = 192 bits (487), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 196/379 (51%), Gaps = 9/379 (2%)
Query: 88 FLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMR 147
F ++ G ++ +A+ + D+M + GC+P +Y V+ L + + LAF M
Sbjct: 118 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 177
Query: 148 EIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKI 207
I+ V N +I +LCK +D A +F+EM +G P+ TY +LI+ LC G+
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYR-HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 208 YEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSL 267
+A +L +M K +P +VT+ +LI+ + EA +L ++M + ++P++FTY+SL
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 268 MDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGL 327
++G C +A ++ + M+SK P++ TY+TL+ G CK ++++ E+ M +GL
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 328 KPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD 387
D Y +I G A +MV G+ P+ +T+S+ ++ GLC
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI-------LLDGLCNNG 409
Query: 388 P-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWS 446
+A +V+ M+ I +D Y+++I CK G + + L L G P+ T++
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 469
Query: 447 AVMTALWDRRKMRQAAELL 465
+++ L +R +++A LL
Sbjct: 470 TMISGLCSKRLLQEAYALL 488
Score = 168 bits (426), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 173/349 (49%), Gaps = 9/349 (2%)
Query: 118 PTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFK 177
P+ + +L+ + + + L M+ +GI + + N+LI C+ S + A
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS-QISLALA 66
Query: 178 IFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLC 237
+ +M G P T +L+NG C +I +A L +M P +T+T+LI+GL
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 238 QSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIV 297
EA+ L + M +G +PN+ TY +++GLCK G A LL M + + ++V
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 298 TYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEM 357
++T+++ LCK + +A+ + M+ +G++P+ Y +ISC C G++ +A+ L +M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 358 VLGGITPNRLTWSLHIRIHNTVVQGLCKTDPN-RAFQVYLSMRNRSISVDSLTYSSLITC 416
+ I PN +T+ N ++ K A +++ M RSI D TY+SLI
Sbjct: 247 IEKKINPNLVTF-------NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Query: 417 FCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
FC + K+ ++ + +V C PD T++ ++ +++ EL
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 287 MISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGK 346
M+ R P+I ++ LL+ + K K + + ++M+ G+ + Y +I+CFC +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 347 YQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISV 405
A L +M+ G P+ +T S +++ G C + A + M
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLS-------SLLNGYCHGKRISDAVALVDQMVEMGYRP 113
Query: 406 DSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
D++T+++LI ++ +VD +V GC P+ T+ V+ L R + A
Sbjct: 114 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA---- 169
Query: 466 LLELMNKC----VEAEVDIQN 482
L+NK +EA+V I N
Sbjct: 170 -FNLLNKMEAAKIEADVVIFN 189
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 234/459 (50%), Gaps = 32/459 (6%)
Query: 44 NGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLD 103
NG H+ T ++MI+ + A +L +V K + F ++ +G + +
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176
Query: 104 AMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIK 163
A+ + D+M E GC+P +Y +++ + LA R M E ++ V + + +I
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 164 ALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACS 223
+LC++ G +DAA +F+EM +G TY +L+ GLC+ GK + L K+M ++
Sbjct: 237 SLCRD-GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 224 PTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMEL 283
P V+T+ L++ + ++EA L++EM ++G+ PN+ TY++LMDG C S+A +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 284 LQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCD 343
L +M+ + P+IVT+++L+ G C ++ + +++ + +GL +A Y ++ FC
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 344 IGKYQEAANFLDEMVLGGITPNRLTWS----------------------------LHIRI 375
GK + A EMV G+ P+ +T+ L I +
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475
Query: 376 HNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELV 434
+ T+++G+CK A+ ++ S+ + + + +TY+ +I+ CKKG + ++ ++ ++
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Query: 435 LDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELMNKC 473
DG P++ T++ ++ A + +A+ L+E M C
Sbjct: 536 EDGNAPNDCTYNTLIRAHLRDGDLTASAK--LIEEMKSC 572
Score = 192 bits (487), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 208/445 (46%), Gaps = 46/445 (10%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G+ D +TF+ +I L + A L+DR+ + C + SI G R A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ + KM+E + +Y T++ L + + A ++ M GI+ V + N L++
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 165 LCK----------------------------------NSGTMDAAFKIFREMPNRGCTPD 190
LCK G + A ++++EM RG +P+
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 191 SYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFE 250
TY TL++G C ++ EA + M CSP +VT+TSLI G C K V++ M++F
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392
Query: 251 EMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEG 310
+ +G+ N TYS L+ G C+ G A EL Q M+S P+++TY LL+GLC G
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Query: 311 KLQEAVEILDRMKLQGLKPDAG--LYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLT 368
KL++A+EI + LQ K D G +Y II C GK ++A N + G+ PN +T
Sbjct: 453 KLEKALEIFE--DLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 510
Query: 369 WSLHIRIHNTVVQGLCKTDPNRAFQVYL-SMRNRSISVDSLTYSSLITCFCKKGDIHKSA 427
+++ I GLCK + L M + + TY++LI + GD+ SA
Sbjct: 511 YTVMI-------SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA 563
Query: 428 RIVDELVLDGCLPDEGTWSAVMTAL 452
++++E+ G D + V+ L
Sbjct: 564 KLIEEMKSCGFSADASSIKMVIDML 588
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 194/392 (49%), Gaps = 30/392 (7%)
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
DA+ +F +M P+ + + + Q L F + + GI + +LN++I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
C+ T A+ + ++ G PD+ T+ TLI GL GK+ EA L M C
Sbjct: 131 NCFCRCCKTC-FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME 282
P VVTY S++NG+C+S A+ L +M + V+ +VFTYS+++D LC+ GC A+
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 283 LLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFC 342
L + M +K + ++VTY++L+ GLCK GK + +L M + + P+ + ++ F
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 343 DIGKYQEAANFLDEMVLGGITPNRLTWS------------------LHIRIHN------- 377
GK QEA EM+ GI+PN +T++ L + + N
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 378 ---TVVQGLCKTD-PNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDEL 433
++++G C + +V+ ++ R + +++TYS L+ FC+ G I + + E+
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 434 VLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
V G LPD T+ ++ L D K+ +A E+
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 148/302 (49%), Gaps = 8/302 (2%)
Query: 173 DAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSL 232
D A +F+EM P + + + R + + K++E + + T +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 233 INGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRH 292
IN C+ A + ++ G EP+ T+++L+ GL G S+A+ L+ M+
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 293 RPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAAN 352
+P++VTY++++NG+C+ G A+++L +M+ + +K D Y II C G A +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 353 FLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYS 411
EM GI + +T+ N++V+GLCK N + M +R I + +T++
Sbjct: 250 LFKEMETKGIKSSVVTY-------NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 412 SLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELMN 471
L+ F K+G + ++ + E++ G P+ T++ +M + ++ +A +L L + N
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 472 KC 473
KC
Sbjct: 363 KC 364
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 116/268 (43%), Gaps = 34/268 (12%)
Query: 52 TFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKM 111
T++ ++ N+ A ++LD + + KC F S+ +GY V R D M+VF +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 112 KEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNS-- 169
+ G +Y ++ + ++KLA ++ M G+ P V + +L+ LC N
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 170 --------------------------------GTMDAAFKIFREMPNRGCTPDSYTYGTL 197
G ++ A+ +F +P +G P+ TY +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 198 INGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGV 257
I+GLC+ G + EA L ++ME +P TY +LI + + + +L EEM+S G
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Query: 258 EPNVFTYSSLMDGLCKGGCSSQAMELLQ 285
+ + ++D L G +++L
Sbjct: 575 SADASSIKMVIDMLLSGELDKSFLDMLS 602
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 198 bits (504), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 141/496 (28%), Positives = 234/496 (47%), Gaps = 53/496 (10%)
Query: 15 SAQVLQLIRAEKDVNK-----ALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPA 69
A + L RA DV + A+ ++ A+ D T+ ++I A +
Sbjct: 47 GASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLG 106
Query: 70 EDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMR-VFDKMKEFGCEPTPKSYITVLA 128
L V K+ + F + +G R DAM V +M E GC P SY +L
Sbjct: 107 FAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLK 166
Query: 129 ILVEENQLKLAFRFYRHM---REIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNR 185
L +EN+ + A M R G P V S +I K G D A+ + EM +R
Sbjct: 167 GLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK-EGDSDKAYSTYHEMLDR 225
Query: 186 GCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEA 245
G PD TY ++I LC+ + +A E+ M P +TY S+++G C S +EA
Sbjct: 226 GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 285
Query: 246 MRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNG 305
+ ++MRS GVEP+V TYS LMD LCK G +A ++ M + +P I TY TLL G
Sbjct: 286 IGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQG 345
Query: 306 --------------------------------LC---KEGKLQEAVEILDRMKLQGLKPD 330
+C K+GK+ +A+ + +M+ QGL P+
Sbjct: 346 YATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPN 405
Query: 331 AGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-N 389
A YG +I C G+ ++A + ++M+ G++P + ++N+++ GLC +
Sbjct: 406 AVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI-------VYNSLIHGLCTCNKWE 458
Query: 390 RAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVM 449
RA ++ L M +R I ++++ ++S+I CK+G + +S ++ + +V G P+ T++ ++
Sbjct: 459 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518
Query: 450 TALWDRRKMRQAAELL 465
KM +A +LL
Sbjct: 519 NGYCLAGKMDEAMKLL 534
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 229/459 (49%), Gaps = 20/459 (4%)
Query: 13 ITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDL 72
+T ++ + + ++KA+ + ++ NG D T++ ++ S+ Q + A
Sbjct: 232 VTYNSIIAALCKAQAMDKAMEVLNTMVK---NGVMPDCMTYNSILHGYCSSGQPKEAIGF 288
Query: 73 LDRVNKEKCD---ITEDIFLS-ICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLA 128
L ++ + + +T + + +C+ R ++A ++FD M + G +P +Y T+L
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKN----GRCMEARKIFDSMTKRGLKPEITTYGTLLQ 344
Query: 129 ILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCT 188
+ L M GI P ++LI A K G +D A +F +M +G
Sbjct: 345 GYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ-GKVDQAMLVFSKMRQQGLN 403
Query: 189 PDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRL 248
P++ TYG +I LC+ G++ +A F++M + SP + Y SLI+GLC E A L
Sbjct: 404 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 463
Query: 249 FEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCK 308
EM +G+ N ++S++D CK G ++ +L ++M+ +PN++TY+TL+NG C
Sbjct: 464 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCL 523
Query: 309 EGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLT 368
GK+ EA+++L M GLKP+ Y +I+ +C I + ++A EM G++P+ +T
Sbjct: 524 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIIT 583
Query: 369 WSLHIRIHNTVVQGLCKTDPNRAF-QVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSA 427
+ N ++QGL +T A ++Y+ + ++ TY+ ++ CK +
Sbjct: 584 Y-------NIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636
Query: 428 RIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLL 466
++ L L + T++ ++ AL + +A +L +
Sbjct: 637 QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 675
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 197/436 (45%), Gaps = 46/436 (10%)
Query: 34 IFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICR 93
IFDS T G + + +T+ ++ + LLD + + +F +
Sbjct: 323 IFDSMTKR---GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379
Query: 94 GYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQP 153
Y + + AM VF KM++ G P +Y V+ IL + +++ A ++ M + G+ P
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Query: 154 CVASLNVLIKALCK----------------------------------NSGTMDAAFKIF 179
N LI LC G + + K+F
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499
Query: 180 REMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQS 239
M G P+ TY TLING C GK+ EA +L M + P VTY++LING C+
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKI 559
Query: 240 KSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTY 299
+E+A+ LF+EM S GV P++ TY+ ++ GL + ++ A EL + + + TY
Sbjct: 560 SRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY 619
Query: 300 STLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVL 359
+ +L+GLCK +A+++ + L LK +A + +I +G+ EA +
Sbjct: 620 NIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSS 679
Query: 360 GGITPNRLTWSLHIRIHNTVVQGLCKTDPNRAFQVYLSMRNRSISVDSLTYSSLITCFCK 419
G+ PN W+ + N + QGL + Q++LSM + +VDS + ++ +
Sbjct: 680 NGLVPN--YWTYRLMAENIIGQGLLE----ELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 733
Query: 420 KGDIHKSA---RIVDE 432
+G+I ++ ++DE
Sbjct: 734 RGEITRAGTYLSMIDE 749
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 142/306 (46%), Gaps = 15/306 (4%)
Query: 174 AAFKIFREMPNRGC---TPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYT 230
AA + M G TPD TYG LI CR G++ + K + +T
Sbjct: 67 AAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFT 126
Query: 231 SLINGLCQSKSVEEAMRL-FEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMIS 289
L+ GLC K +AM + M G PNVF+Y+ L+ GLC S +A+ELL MM
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMAD 186
Query: 290 KR---HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGK 346
R P++V+Y+T++NG KEG +A M +G+ PD Y II+ C
Sbjct: 187 DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQA 246
Query: 347 YQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKT-DPNRAFQVYLSMRNRSISV 405
+A L+ MV G+ P+ +T+ N+++ G C + P A MR+ +
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTY-------NSILHGYCSSGQPKEAIGFLKKMRSDGVEP 299
Query: 406 DSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
D +TYS L+ CK G ++ +I D + G P+ T+ ++ + + + LL
Sbjct: 300 DVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 359
Query: 466 LLELMN 471
L + N
Sbjct: 360 DLMVRN 365
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 166/343 (48%), Gaps = 6/343 (1%)
Query: 13 ITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDL 72
+T V+ ++ V A++ F+ E G N ++ +I L + N++ AE+L
Sbjct: 407 VTYGAVIGILCKSGRVEDAMLYFEQMIDE---GLSPGNIVYNSLIHGLCTCNKWERAEEL 463
Query: 73 -LDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILV 131
L+ +++ C + F SI + + R +++ ++F+ M G +P +Y T++
Sbjct: 464 ILEMLDRGIC-LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYC 522
Query: 132 EENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDS 191
++ A + M +G++P + + LI CK S M+ A +F+EM + G +PD
Sbjct: 523 LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS-RMEDALVLFKEMESSGVSPDI 581
Query: 192 YTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEE 251
TY ++ GL + + AKEL+ + + TY +++GLC++K ++A+++F+
Sbjct: 582 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQN 641
Query: 252 MRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGK 311
+ ++ T++ ++D L K G + +A +L S PN TY + + +G
Sbjct: 642 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 701
Query: 312 LQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFL 354
L+E ++ M+ G D+G+ I+ G+ A +L
Sbjct: 702 LEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL 744
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 16/265 (6%)
Query: 209 EAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKG---VEPNVFTYS 265
+A+ +F E+ + ++ + + + S A+ + M G V P++ TY
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVARD-SPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 266 SLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEI-LDRMKL 324
L+ C+ G L +I K R + + ++ LL GLC + + +A++I L RM
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 325 QGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMV---LGGITPNRLTWSLHIRIHNTVVQ 381
G P+ Y ++ CD + QEA L M GG P+ ++++ TV+
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT-------TVIN 204
Query: 382 GLCKT-DPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLP 440
G K D ++A+ Y M +R I D +TY+S+I CK + K+ +++ +V +G +P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 441 DEGTWSAVMTALWDRRKMRQAAELL 465
D T+++++ + ++A L
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFL 289
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 123/275 (44%), Gaps = 2/275 (0%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G + + T++ +I+ A + A LL + + ++ GY ++ R DA
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ +F +M+ G P +Y +L L + + A Y + E G Q +++ N+++
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 625
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
LCKN T D A ++F+ + ++ T+ +I+ L ++G+ EAK+LF + P
Sbjct: 626 LCKNKLT-DDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVP 684
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL 284
TY + + +EE +LF M G + + ++ L + G ++A L
Sbjct: 685 NYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL 744
Query: 285 QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEIL 319
MI ++H + ++L L GK QE L
Sbjct: 745 S-MIDEKHFSLEASTASLFIDLLSGGKYQEYYRFL 778
Score = 35.4 bits (80), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 93/224 (41%), Gaps = 4/224 (1%)
Query: 31 ALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLS 90
ALV+F + +G D T+++++ L + A++L R+ + I +
Sbjct: 565 ALVLFKEMES---SGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 91 ICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIG 150
I G + DA+++F + + +++ ++ L++ + A + G
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681
Query: 151 IQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEA 210
+ P + ++ + + G ++ ++F M + GCT DS ++ L + G+I A
Sbjct: 682 LVPNYWTYRLMAENII-GQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
Query: 211 KELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRS 254
++ K S T + I+ L K E L E+ +S
Sbjct: 741 GTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYYRFLPEKYKS 784
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/481 (28%), Positives = 235/481 (48%), Gaps = 52/481 (10%)
Query: 13 ITSAQVLQLIRA---EKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPA 69
++ A + +L++A K V+KAL +F A + +ST++ +I L+ Q
Sbjct: 160 VSPAVLSELVKALGRAKMVSKALSVFYQAKGRKC---KPTSSTYNSVILMLMQEGQHEKV 216
Query: 70 EDLLDRV-NKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLA 128
++ + N+ C + ++ Y ++ R A+R+FD+MK+ +PT K Y T+L
Sbjct: 217 HEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLG 276
Query: 129 ILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCT 188
I + +++ A + M+ G P V + LIK L K +G +D A+ +++M G T
Sbjct: 277 IYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGK-AGRVDEAYGFYKDMLRDGLT 335
Query: 189 PDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKS-VEEAMR 247
PD L+N L ++G++ E +F EM C+PTVV+Y ++I L +SK+ V E
Sbjct: 336 PDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSS 395
Query: 248 LFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLC 307
F++M++ V P+ FTYS L+DG CK +A+ LL+ M K P Y +L+N L
Sbjct: 396 WFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG 455
Query: 308 KE-----------------------------------GKLQEAVEILDRMKLQGLKPDAG 332
K GKL EAV++ + MK QG PD
Sbjct: 456 KAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVY 515
Query: 333 LYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRA 391
Y ++S G EA + L +M G + I HN ++ G +T P RA
Sbjct: 516 AYNALMSGMVKAGMINEANSLLRKMEENGCRAD-------INSHNIILNGFARTGVPRRA 568
Query: 392 FQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTA 451
+++ ++++ I D +TY++L+ CF G ++AR++ E+ G D T+S+++ A
Sbjct: 569 IEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Query: 452 L 452
+
Sbjct: 629 V 629
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/495 (25%), Positives = 226/495 (45%), Gaps = 28/495 (5%)
Query: 6 MFKWSTKITSA-QVLQL----------IRAEKDVNKALVIFDSATAEYANGFRHDNSTFS 54
+FKW A +VL+L + + ++N + F A F+HD ST+
Sbjct: 73 IFKWGPDAEKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKR--RNFQHDCSTYM 130
Query: 55 LMISKLVSANQFRPAEDLLDRVNKEK-CDITEDIFLSICRGYGRVHRPLDAMRVFDKMKE 113
+I L A + + V + ++ + + + GR A+ VF + K
Sbjct: 131 TLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKG 190
Query: 114 FGCEPTPKSYITVLAILVEENQLKLAFRFYRHM-REIGIQPCVASLNVLIKALCKNSGTM 172
C+PT +Y +V+ +L++E Q + Y M E P + + LI + K G
Sbjct: 191 RKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEK-LGRN 249
Query: 173 DAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSL 232
D+A ++F EM + P Y TL+ ++GK+ +A +LF+EM+ CSPTV TYT L
Sbjct: 250 DSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTEL 309
Query: 233 INGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRH 292
I GL ++ V+EA +++M G+ P+V ++LM+ L K G + + M R
Sbjct: 310 IKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRC 369
Query: 293 RPNIVTYSTLLNGLCK-EGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
P +V+Y+T++ L + + + E D+MK + P Y +I +C + ++A
Sbjct: 370 TPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKAL 429
Query: 352 NFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPNRAF-QVYLSMRNRSISVDSLTY 410
L+EM G P + +++ L K A +++ ++ +V S Y
Sbjct: 430 LLLEEMDEKGFPPCPAAYC-------SLINALGKAKRYEAANELFKELKENFGNVSSRVY 482
Query: 411 SSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELM 470
+ +I F K G + ++ + +E+ G PD ++A+M+ + + +A LL
Sbjct: 483 AVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEE 542
Query: 471 NKCVEAEVDIQNQDV 485
N C DI + ++
Sbjct: 543 NGC---RADINSHNI 554
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 206/414 (49%), Gaps = 17/414 (4%)
Query: 53 FSLMISKLVSANQFRPAEDLLDRVNK---EKCDITEDIFLS-ICRGYGRVHRPLDAMRVF 108
FS ++S + N+F L +++ T I ++ CR R PL A+ V
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCR---RSQLPL-ALAVL 139
Query: 109 DKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKN 168
KM + G EP + ++L ++ A M G QP + N LI L +
Sbjct: 140 GKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 199
Query: 169 SGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVT 228
+ +A I R M +GC PD TYG ++NGLC+ G A L +ME P V+
Sbjct: 200 NKASEAMALIDR-MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 229 YTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMI 288
Y ++I+GLC+ K +++A+ LF+EM +KG+ PNV TYSSL+ LC G S A LL MI
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 289 SKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQ 348
++ P++ T+S L++ KEGKL EA ++ D M + + P Y +I+ FC +
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 349 EAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRAFQVYLSMRNRSISVDS 407
EA + MV P+ +T+ NT+++G CK +V+ M R + ++
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTY-------NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 408 LTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQA 461
+TY+ LI + GD + I E+V DG P+ T++ ++ L K+ +A
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Score = 195 bits (495), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 225/454 (49%), Gaps = 12/454 (2%)
Query: 13 ITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDL 72
+T + +L K +++A+ + D + G++ + TF+ +I L N+ A L
Sbjct: 152 VTLSSLLNGYCHSKRISEAVALVDQM---FVTGYQPNTVTFNTLIHGLFLHNKASEAMAL 208
Query: 73 LDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVE 132
+DR+ + C + + G + A + +KM++ EP Y T++ L +
Sbjct: 209 IDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCK 268
Query: 133 ENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSY 192
+ A ++ M GI+P V + + LI LC N G A ++ +M R PD +
Sbjct: 269 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC-NYGRWSDASRLLSDMIERKINPDVF 327
Query: 193 TYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEM 252
T+ LI+ + GK+ EA++L+ EM ++ P++VTY+SLING C ++EA ++FE M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 253 RSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKL 312
SK P+V TY++L+ G CK + ME+ + M + N VTY+ L+ GL + G
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 313 QEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLH 372
A EI M G+ P+ Y ++ C GK ++A + + + P
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT------- 500
Query: 373 IRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVD 431
I +N +++G+CK + ++ ++ + + D + Y+++I+ FC+KG ++ +
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 432 ELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
E+ DG LP+ G ++ ++ A +AEL+
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 594
Score = 192 bits (487), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 127/447 (28%), Positives = 217/447 (48%), Gaps = 9/447 (2%)
Query: 20 QLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKE 79
+L+ A +NK V+ G H++ T+S++I+ +Q A +L ++ K
Sbjct: 86 KLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKL 145
Query: 80 KCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLA 139
+ S+ GY R +A+ + D+M G +P ++ T++ L N+ A
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 205
Query: 140 FRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLIN 199
M G QP + + V++ LCK G D AF + +M P Y T+I+
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKR-GDTDLAFNLLNKMEQGKLEPGVLIYNTIID 264
Query: 200 GLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEP 259
GLC+ + +A LFKEMETK P VVTY+SLI+ LC +A RL +M + + P
Sbjct: 265 GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 324
Query: 260 NVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEIL 319
+VFT+S+L+D K G +A +L M+ + P+IVTYS+L+NG C +L EA ++
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 320 DRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTV 379
+ M + PD Y +I FC + +E EM G+ N +T+ N +
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY-------NIL 437
Query: 380 VQGLCKT-DPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGC 438
+QGL + D + A +++ M + + + +TY++L+ CK G + K+ + + L
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 439 LPDEGTWSAVMTALWDRRKMRQAAELL 465
P T++ ++ + K+ +L
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 199/419 (47%), Gaps = 43/419 (10%)
Query: 43 ANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPL 102
A G + D T+ ++++ L A +LL+++ + K + I+ +I G +
Sbjct: 214 AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD 273
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
DA+ +F +M+ G P +Y ++++ L + A R M E I P V + + LI
Sbjct: 274 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
A K G + A K++ EM R P TY +LING C ++ EAK++F+ M +K C
Sbjct: 334 DAFVK-EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMR----------------------------------- 247
P VVTY +LI G C+ K VEE M
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 248 LFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLC 307
+F+EM S GV PN+ TY++L+DGLCK G +AM + + + + P I TY+ ++ G+C
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 308 KEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRL 367
K GK+++ ++ + L+G+KPD Y +IS FC G +EA EM G PN
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Query: 368 TWSLHIRIHNTVVQGLCKTDPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKS 426
++ IR L D + ++ MR+ + D+ T L+T G + KS
Sbjct: 573 CYNTLIRAR------LRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKS 624
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 184/364 (50%), Gaps = 9/364 (2%)
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
DA+ +F +M + P+ + +L+ + + N+ + M+ +GI + ++LI
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
C+ S + A + +M G P+ T +L+NG C +I EA L +M
Sbjct: 124 NCFCRRS-QLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME 282
P VT+ +LI+GL EAM L + M +KG +P++ TY +++GLCK G + A
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 283 LLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFC 342
LL M + P ++ Y+T+++GLCK + +A+ + M+ +G++P+ Y +ISC C
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 343 DIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNR 401
+ G++ +A+ L +M+ I P+ T+S ++ K A ++Y M R
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFS-------ALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 402 SISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQA 461
SI +TYSSLI FC + ++ ++ + +V C PD T++ ++ +++ +
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 462 AELL 465
E+
Sbjct: 416 MEVF 419
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 165/325 (50%), Gaps = 15/325 (4%)
Query: 153 PCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKE 212
P + + L+ A+ K + D + +M N G + YTY LIN CR ++ A
Sbjct: 79 PSIIEFSKLLSAIAKMN-KFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALA 137
Query: 213 LFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLC 272
+ +M P +VT +SL+NG C SK + EA+ L ++M G +PN T+++L+ GL
Sbjct: 138 VLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 197
Query: 273 KGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAG 332
+S+AM L+ M++K +P++VTY ++NGLCK G A +L++M+ L+P
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 333 LYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCK----TDP 388
+Y II C +A N EM GI PN +T+S +++ LC +D
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS-------SLISCLCNYGRWSDA 310
Query: 389 NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAV 448
+R M R I+ D T+S+LI F K+G + ++ ++ DE+V P T+S++
Sbjct: 311 SRLLS---DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 449 MTALWDRRKMRQAAELLLLELMNKC 473
+ ++ +A ++ + C
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHC 392
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 182/346 (52%), Gaps = 4/346 (1%)
Query: 26 KDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITE 85
K ++ AL +F + G R + T+S +IS L + ++ A LL + + K +
Sbjct: 270 KHMDDALNLFKEMETK---GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 86 DIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRH 145
F ++ + + + ++A +++D+M + +P+ +Y +++ ++L A + +
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 146 MREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLG 205
M P V + N LIK CK ++ ++FREM RG ++ TY LI GL + G
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYK-RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 206 KIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYS 265
A+E+FKEM + P ++TY +L++GLC++ +E+AM +FE ++ +EP ++TY+
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 266 SLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQ 325
+++G+CK G +L + K +P++V Y+T+++G C++G +EA + MK
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 326 GLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSL 371
G P++G Y +I G + +A + EM G + T L
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 611
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 159/308 (51%), Gaps = 9/308 (2%)
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTS 231
+D A +F EM P + L++ + ++ K L ++M+ TY+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 232 LINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKR 291
LIN C+ + A+ + +M G EPN+ T SSL++G C S+A+ L+ M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 292 HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
++PN VT++TL++GL K EA+ ++DRM +G +PD YG +++ C G A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 352 NFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTY 410
N L++M G + P L I+NT++ GLCK + A ++ M + I + +TY
Sbjct: 242 NLLNKMEQGKLEPGVL-------IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 411 SSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELM 470
SSLI+C C G ++R++ +++ PD T+SA++ A K+ + AE L E++
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE-AEKLYDEMV 353
Query: 471 NKCVEAEV 478
+ ++ +
Sbjct: 354 KRSIDPSI 361
Score = 85.5 bits (210), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 1/182 (0%)
Query: 104 AMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIK 163
A +F +M G P +Y T+L L + +L+ A + +++ ++P + + N++I+
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 164 ALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACS 223
+CK +G ++ + +F + +G PD Y T+I+G CR G EA LFKEM+
Sbjct: 510 GMCK-AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568
Query: 224 PTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMEL 283
P Y +LI + E + L +EMRS G + T + + L G +++
Sbjct: 569 PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDM 628
Query: 284 LQ 285
L
Sbjct: 629 LS 630
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 194 bits (494), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 207/436 (47%), Gaps = 30/436 (6%)
Query: 46 FRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAM 105
+ D T+ ++ L +F +++D + + +E S+ G + + +A+
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 106 RVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKAL 165
+ ++ +FG P Y ++ L + + A + M +IG++P + ++LI
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Query: 166 CKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPT 225
C+ G +D A EM + G Y Y +LING C+ G I A+ EM K PT
Sbjct: 413 CRR-GKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 226 VVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQ 285
VVTYTSL+ G C + +A+RL+ EM KG+ P+++T+++L+ GL + G A++L
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531
Query: 286 MMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIG 345
M +PN VTY+ ++ G C+EG + +A E L M +G+ PD Y +I C G
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 346 KYQEAANFLDEMVLGGITPNRLTWS----------------------------LHIRIHN 377
+ EA F+D + G N + ++ L + +
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 378 TVVQGLCK-TDPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLD 436
++ G K D F + M +R + D + Y+S+I K GD ++ I D ++ +
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711
Query: 437 GCLPDEGTWSAVMTAL 452
GC+P+E T++AV+ L
Sbjct: 712 GCVPNEVTYTAVINGL 727
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 204/396 (51%), Gaps = 7/396 (1%)
Query: 69 AEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLA 128
AE + + +K + T + S+ GY + A+R++ +M G P+ ++ T+L+
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 129 ILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCT 188
L ++ A + + M E ++P + NV+I+ C+ G M AF+ +EM +G
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE-EGDMSKAFEFLKEMTEKGIV 574
Query: 189 PDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRL 248
PD+Y+Y LI+GLC G+ EAK + C + YT L++G C+ +EEA+ +
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 249 FEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCK 308
+EM +GV+ ++ Y L+DG K LL+ M + +P+ V Y+++++ K
Sbjct: 635 CQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSK 694
Query: 309 EGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLT 368
G +EA I D M +G P+ Y +I+ C G EA +M PN++T
Sbjct: 695 TGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVT 754
Query: 369 WSLHIRIHNTVVQGLCKTDPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSAR 428
+ + I + +G + D +A +++ ++ + + ++ TY+ LI FC++G I +++
Sbjct: 755 YGCFLDI---LTKG--EVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASE 808
Query: 429 IVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAEL 464
++ ++ DG PD T++ ++ L R +++A EL
Sbjct: 809 LITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 844
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 215/467 (46%), Gaps = 81/467 (17%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLL-----------DRVN-----KEKCDITEDI- 87
GF H ++F ++I LV AN F PA LL D N EKC ++
Sbjct: 99 GFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSS 158
Query: 88 FLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMR 147
F + + Y R R LD + VF M IT +++L
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMM------------ITKVSLL----------------- 189
Query: 148 EIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKI 207
P V +L+ L+ L K A ++F +M + G PD Y Y +I LC L +
Sbjct: 190 -----PEVRTLSALLHGLVKFR-HFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDL 243
Query: 208 YEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSL 267
AKE+ ME C +V Y LI+GLC+ + V EA+ + +++ K ++P+V TY +L
Sbjct: 244 SRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTL 303
Query: 268 MDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGL 327
+ GLCK +E++ M+ R P+ S+L+ GL K GK++EA+ ++ R+ G+
Sbjct: 304 VYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGV 363
Query: 328 KPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRI------------ 375
P+ +Y +I C K+ EA D M G+ PN +T+S+ I +
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423
Query: 376 ----------------HNTVVQGLCKTDPNRAFQVYLS-MRNRSISVDSLTYSSLITCFC 418
+N+++ G CK A + +++ M N+ + +TY+SL+ +C
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 419 KKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
KG I+K+ R+ E+ G P T++ +++ L+ +R A +L
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Score = 149 bits (375), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 183/367 (49%), Gaps = 9/367 (2%)
Query: 6 MFKWSTK---ITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVS 62
M +W+ K +T +++ E D++KA T + G D ++ +I L
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK---GIVPDTYSYRPLIHGLCL 589
Query: 63 ANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKS 122
Q A+ +D ++K C++ E + + G+ R + +A+ V +M + G +
Sbjct: 590 TGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVC 649
Query: 123 YITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREM 182
Y ++ ++ KL F + M + G++P +I A K +G AF I+ M
Sbjct: 650 YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSK-TGDFKEAFGIWDLM 708
Query: 183 PNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSK-S 241
N GC P+ TY +INGLC+ G + EA+ L +M+ + P VTY ++ L + +
Sbjct: 709 INEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVD 768
Query: 242 VEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYST 301
+++A+ L + KG+ N TY+ L+ G C+ G +A EL+ MI P+ +TY+T
Sbjct: 769 MQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTT 827
Query: 302 LLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGG 361
++N LC+ +++A+E+ + M +G++PD Y +I C G+ +A +EM+ G
Sbjct: 828 MINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
Query: 362 ITPNRLT 368
+ PN T
Sbjct: 888 LIPNNKT 894
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 173/409 (42%), Gaps = 46/409 (11%)
Query: 11 TKITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAE 70
T +T ++ ++ +NKAL ++ T + G TF+ ++S L A R A
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGK---GIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 71 DLLDRVNKEKCDITEDIFLSICRGY-------------------GRV-----HRPL---- 102
L + + + + + GY G V +RPL
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 103 -------DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCV 155
+A D + + CE Y +L E +L+ A + M + G+ +
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDL 647
Query: 156 ASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFK 215
VLI K+ F + +EM +RG PD Y ++I+ + G EA ++
Sbjct: 648 VCYGVLIDGSLKHKDR-KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWD 706
Query: 216 EMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGG 275
M + C P VTYT++INGLC++ V EA L +M+ PN TY +D L KG
Sbjct: 707 LMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGE 766
Query: 276 CSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYG 335
Q L I K N TY+ L+ G C++G+++EA E++ RM G+ PD Y
Sbjct: 767 VDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYT 826
Query: 336 KIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLC 384
+I+ C ++A + M GI P+R+ + NT++ G C
Sbjct: 827 TMINELCRRNDVKKAIELWNSMTEKGIRPDRVAY-------NTLIHGCC 868
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 1/199 (0%)
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
+A ++D M GC P +Y V+ L + + A M+ + P + +
Sbjct: 700 EAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL 759
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
L K M A ++ + +G ++ TY LI G CR G+I EA EL M
Sbjct: 760 DILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME 282
SP +TYT++IN LC+ V++A+ L+ M KG+ P+ Y++L+ G C G +A E
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878
Query: 283 LLQMMISKRHRPNIVTYST 301
L M+ + PN T T
Sbjct: 879 LRNEMLRQGLIPNNKTSRT 897
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 89/235 (37%), Gaps = 36/235 (15%)
Query: 42 YANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRP 101
+ G + D+ ++ MI F+ A + D + E C E + ++ G +
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 102 LDAMRVFDKMKEFGCEPTPKSYITVLAILVE-ENQLKLAFRFYRHMREIGIQPCVASLNV 160
+A + KM+ P +Y L IL + E ++ A + + + G+ A+ N+
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNM 792
Query: 161 LIKALCKNSGTMDA----------------------------------AFKIFREMPNRG 186
LI+ C+ +A A +++ M +G
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG 852
Query: 187 CTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKS 241
PD Y TLI+G C G++ +A EL EM + P T + + SKS
Sbjct: 853 IRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSNDTSSKS 907
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 210/426 (49%), Gaps = 13/426 (3%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G HD T +L+++ ++Q A L ++ K + F S+ G+ +R +A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
M + ++M E G +P Y T++ L + + A + M GI+P V L+
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
LC NSG A + R M R PD T+ LI+ + GK +A+EL+ EM + +P
Sbjct: 222 LC-NSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL 284
+ TYTSLING C V+EA ++F M +KG P+V Y+SL++G CK AM++
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 285 QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDI 344
M K N +TY+TL+ G + GK A E+ M +G+ P+ Y ++ C C
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Query: 345 GKYQEAANFLDEMV---LGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRN 400
GK ++A ++M + G+ PN W+ +N ++ GLC +A V+ MR
Sbjct: 401 GKVKKALMIFEDMQKREMDGVAPN--IWT-----YNVLLHGLCYNGKLEKALMVFEDMRK 453
Query: 401 RSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQ 460
R + + +TY+ +I CK G + + + L G P+ T++ +++ L+ R ++
Sbjct: 454 REMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLF-REGLKH 512
Query: 461 AAELLL 466
A +L
Sbjct: 513 EAHVLF 518
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 213/401 (53%), Gaps = 20/401 (4%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVN----KEKCDITEDIFLSICRGYGRVHR 100
GF D TF+ +I+ N+ A +++++ K + I S+C+ G V+
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN-GHVNY 195
Query: 101 PLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNV 160
A+ +FD+M+ +G P Y +++ L + + A R M + I+P V + N
Sbjct: 196 ---ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 161 LIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETK 220
LI A K +DA +++ EM P+ +TY +LING C G + EA+++F METK
Sbjct: 253 LIDAFVKEGKFLDAE-ELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Query: 221 ACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQA 280
C P VV YTSLING C+ K V++AM++F EM KG+ N TY++L+ G + G + A
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 281 MELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMK---LQGLKPDAGLYGKI 337
E+ M+S+ PNI TY+ LL+ LC GK+++A+ I + M+ + G+ P+ Y +
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Query: 338 ISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYL 396
+ C GK ++A ++M + + I + ++QG+CK A ++
Sbjct: 432 LHGLCYNGKLEKALMVFEDM-------RKREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 397 SMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDG 437
S+ ++ + + +TY+++I+ ++G H++ + ++ DG
Sbjct: 485 SLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 177/345 (51%), Gaps = 14/345 (4%)
Query: 132 EENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDS 191
+ +Q LA F M ++G +P + + LI C + M+ A + +M G PD
Sbjct: 119 QSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGN-RMEEAMSMVNQMVEMGIKPDV 177
Query: 192 YTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEE 251
Y T+I+ LC+ G + A LF +ME P VV YTSL+NGLC S +A L
Sbjct: 178 VMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRG 237
Query: 252 MRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGK 311
M + ++P+V T+++L+D K G A EL MI PNI TY++L+NG C EG
Sbjct: 238 MTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 312 LQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSL 371
+ EA ++ M+ +G PD Y +I+ FC K +A EM G+T N +T++
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYT- 356
Query: 372 HIRIHNTVVQGLCKT-DPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIV 430
T++QG + PN A +V+ M +R + + TY+ L+ C C G + K+ I
Sbjct: 357 ------TLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 431 DELV---LDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELMNK 472
+++ +DG P+ T++ ++ L K+ +A L++ E M K
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA--LMVFEDMRK 453
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 157/332 (47%), Gaps = 9/332 (2%)
Query: 135 QLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTY 194
Q A + HM E P + L+ + K D + + G + D YT
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMK-KFDVVINLCDHLQIMGVSHDLYTC 110
Query: 195 GTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRS 254
L+N C+ + Y A +M P +VT+TSLING C +EEAM + +M
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 255 KGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQE 314
G++P+V Y++++D LCK G + A+ L M + RP++V Y++L+NGLC G+ ++
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 315 AVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIR 374
A +L M + +KPD + +I F GK+ +A +EM+ I PN T++
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT---- 286
Query: 375 IHNTVVQGLCKTD-PNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDEL 433
+++ G C + A Q++ M + D + Y+SLI FCK + + +I E+
Sbjct: 287 ---SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 434 VLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
G + T++ ++ K A E+
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Score = 145 bits (365), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 174/339 (51%), Gaps = 7/339 (2%)
Query: 28 VNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDI 87
VN AL +FD G R D ++ +++ L ++ ++R A+ LL + K K
Sbjct: 193 VNYALSLFDQMENY---GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 88 FLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMR 147
F ++ + + + LDA ++++M P +Y +++ E + A + + M
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 148 EIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKI 207
G P V + LI CK +D A KIF EM +G T ++ TY TLI G ++GK
Sbjct: 310 TKGCFPDVVAYTSLINGFCK-CKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368
Query: 208 YEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSK---GVEPNVFTY 264
A+E+F M ++ P + TY L++ LC + V++A+ +FE+M+ + GV PN++TY
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTY 428
Query: 265 SSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKL 324
+ L+ GLC G +A+ + + M + I+TY+ ++ G+CK GK++ AV + +
Sbjct: 429 NVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPS 488
Query: 325 QGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGIT 363
+G+KP+ Y +IS G EA +M G++
Sbjct: 489 KGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 216/422 (51%), Gaps = 16/422 (3%)
Query: 36 DSATAEYANGFRHDNS----TFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSI 91
++A YA+ +R + TF++MI+ L + + A+ L + T + ++
Sbjct: 207 ENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTL 266
Query: 92 CRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGI 151
+G+ R A + +MK G +P ++Y +L+ + E + A R M+EIG+
Sbjct: 267 VQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGL 323
Query: 152 QPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAK 211
P S N+LI+ C N+G ++ AF EM +G P YTY TLI+GL KI A+
Sbjct: 324 VPDSVSYNILIRG-CSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAE 382
Query: 212 ELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGL 271
L +E+ K VTY LING CQ ++A L +EM + G++P FTY+SL+ L
Sbjct: 383 ILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVL 442
Query: 272 CKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDA 331
C+ + +A EL + ++ K +P++V +TL++G C G + A +L M + + PD
Sbjct: 443 CRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDD 502
Query: 332 GLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKT-DPNR 390
Y ++ C GK++EA + EM GI P+ +++ NT++ G K D
Sbjct: 503 VTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISY-------NTLISGYSKKGDTKH 555
Query: 391 AFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMT 450
AF V M + + LTY++L+ K + + ++ E+ +G +P++ ++ +V+
Sbjct: 556 AFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIE 615
Query: 451 AL 452
A+
Sbjct: 616 AM 617
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 183/356 (51%), Gaps = 12/356 (3%)
Query: 111 MKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSG 170
M+ FG +PT +Y T++ +++ A M+ G QP + + N ++ +C N G
Sbjct: 251 MEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMC-NEG 309
Query: 171 TMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYT 230
A ++ REM G PDS +Y LI G G + A EM + PT TY
Sbjct: 310 R---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYN 366
Query: 231 SLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISK 290
+LI+GL +E A L E+R KG+ + TY+ L++G C+ G + +A L M++
Sbjct: 367 TLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTD 426
Query: 291 RHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEA 350
+P TY++L+ LC++ K +EA E+ +++ +G+KPD + ++ C IG A
Sbjct: 427 GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRA 486
Query: 351 ANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLT 409
+ L EM + I P+ +T+ N +++GLC A ++ M+ R I D ++
Sbjct: 487 FSLLKEMDMMSINPDDVTY-------NCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 410 YSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
Y++LI+ + KKGD + + DE++ G P T++A++ L ++ A ELL
Sbjct: 540 YNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELL 595
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 161/324 (49%), Gaps = 21/324 (6%)
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTS 231
+D A + F M +G P + T ++ L RL +I A + +M V T+
Sbjct: 171 VDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNI 230
Query: 232 LINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKR 291
+IN LC+ +++A M G++P + TY++L+ G G A ++ M SK
Sbjct: 231 MINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG 290
Query: 292 HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
+P++ TY+ +L+ +C EG+ A E+L MK GL PD+ Y +I + G + A
Sbjct: 291 FQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 352 NFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPNRAFQVYL-SMRNRSISVDSLTY 410
+ DEMV G+ P T+ NT++ GL + A ++ + +R + I +DS+TY
Sbjct: 348 AYRDEMVKQGMVPTFYTY-------NTLIHGLFMENKIEAAEILIREIREKGIVLDSVTY 400
Query: 411 SSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLL---- 466
+ LI +C+ GD K+ + DE++ DG P + T+++++ L + K R+A EL
Sbjct: 401 NILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVG 460
Query: 467 ------LELMNKCVEAEVDIQNQD 484
L +MN ++ I N D
Sbjct: 461 KGMKPDLVMMNTLMDGHCAIGNMD 484
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 157/339 (46%), Gaps = 43/339 (12%)
Query: 43 ANGFRHDNSTFSLMISKLVSANQFRPAEDL--LDRVNKEKCDITEDIFLSICRGYGRVHR 100
+ GF+ D T++ ++S + N+ R +E L + + ++ +I + C G +
Sbjct: 288 SKGFQPDMQTYNPILSWM--CNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEM 345
Query: 101 PLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNV 160
A D+M + G PT +Y T++ L EN+++ A R +RE GI + N+
Sbjct: 346 ---AFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 161 LIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELF------ 214
LI C++ G AF + EM G P +TY +LI LCR K EA ELF
Sbjct: 403 LINGYCQH-GDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGK 461
Query: 215 -----------------------------KEMETKACSPTVVTYTSLINGLCQSKSVEEA 245
KEM+ + +P VTY L+ GLC EEA
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEA 521
Query: 246 MRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNG 305
L EM+ +G++P+ +Y++L+ G K G + A + M+S P ++TY+ LL G
Sbjct: 522 RELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKG 581
Query: 306 LCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDI 344
L K + + A E+L MK +G+ P+ + +I ++
Sbjct: 582 LSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 192 bits (488), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 199/390 (51%), Gaps = 28/390 (7%)
Query: 99 HRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMRE---------- 148
H+ ++ F K+ + G +P ++ T+L L E+++ A + +M E
Sbjct: 155 HKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF 214
Query: 149 -----IGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCR 203
IG+ P V + N LI LC ++AA + +M +G D TYGT++NG+C+
Sbjct: 215 DQMVEIGLTPVVITFNTLINGLCLEGRVLEAA-ALVNKMVGKGLHIDVVTYGTIVNGMCK 273
Query: 204 LGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFT 263
+G A L +ME P VV Y+++I+ LC+ +A LF EM KG+ PNVFT
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 264 YSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMK 323
Y+ ++DG C G S A LL+ MI + P+++T++ L++ KEGKL EA ++ D M
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 324 LQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGL 383
+ + PD Y +I FC ++ +A + D M +P+ +T+ NT++
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTF-------NTIIDVY 442
Query: 384 CKTD-PNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDE 442
C+ + Q+ + R + ++ TY++LI FC+ +++ + + E++ G PD
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 443 GTWSAVMTALWDRRKMRQAAELLLLELMNK 472
T + ++ + K+ +A EL + M+K
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSK 532
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 205/424 (48%), Gaps = 13/424 (3%)
Query: 43 ANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPL 102
G D T+ +++ + + A +LL ++ + I+ +I +
Sbjct: 254 GKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHS 313
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
DA +F +M E G P +Y ++ + A R R M E I P V + N LI
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
A K G + A K+ EM +R PD+ TY ++I G C+ + +AK +F M
Sbjct: 374 SASVK-EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----A 428
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME 282
SP VVT+ ++I+ C++K V+E M+L E+ +G+ N TY++L+ G C+ + A +
Sbjct: 429 SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 283 LLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFC 342
L Q MIS P+ +T + LL G C+ KL+EA+E+ + +++ + D Y II C
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 343 DIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLC-KTDPNRAFQVYLSMRNR 401
K EA + + + G+ P+ ++ +N ++ G C K+ + A ++ M++
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPD-------VQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 402 SISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQA 461
D+ TY++LI K G+I KS ++ E+ +G D T V + D R +
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDKSF 661
Query: 462 AELL 465
+++L
Sbjct: 662 SDML 665
Score = 158 bits (399), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 181/378 (47%), Gaps = 26/378 (6%)
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
DA+ FD M T V+ + V N+ +A YR M I + S N+LI
Sbjct: 89 DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKI--------------- 207
K C + + + F ++ G PD T+ TL++GLC +I
Sbjct: 149 KCFC-DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF 207
Query: 208 YEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSL 267
EA LF +M +P V+T+ +LINGLC V EA L +M KG+ +V TY ++
Sbjct: 208 LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
Query: 268 MDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGL 327
++G+CK G + A+ LL M +P++V YS +++ LCK+G +A + M +G+
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 328 KPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD 387
P+ Y +I FC G++ +A L +M+ I P+ LT++ I +V +G
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN--ALISASVKEG----K 381
Query: 388 PNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSA 447
A ++ M +R I D++TY+S+I FCK + + D + PD T++
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNT 437
Query: 448 VMTALWDRRKMRQAAELL 465
++ +++ + +LL
Sbjct: 438 IIDVYCRAKRVDEGMQLL 455
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 183/367 (49%), Gaps = 13/367 (3%)
Query: 100 RPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLN 159
R L+A + +KM G +Y T++ + + K A M E I+P V +
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300
Query: 160 VLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMET 219
+I LCK+ DA + +F EM +G P+ +TY +I+G C G+ +A+ L ++M
Sbjct: 301 AIIDRLCKDGHHSDAQY-LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 220 KACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQ 279
+ +P V+T+ +LI+ + + EA +L +EM + + P+ TY+S++ G CK
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 280 AMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIIS 339
A + +M S P++VT++T+++ C+ ++ E +++L + +GL + Y +I
Sbjct: 420 AKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIH 475
Query: 340 CFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSM 398
FC++ A + EM+ G+ P+ +T N ++ G C+ + A +++ +
Sbjct: 476 GFCEVDNLNAAQDLFQEMISHGVCPDTITC-------NILLYGFCENEKLEEALELFEVI 528
Query: 399 RNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKM 458
+ I +D++ Y+ +I CK + ++ + L + G PD T++ +++ + +
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAI 588
Query: 459 RQAAELL 465
A L
Sbjct: 589 SDANVLF 595
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 146/294 (49%), Gaps = 24/294 (8%)
Query: 197 LINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKG 256
+I R+ + A L+++ME + + ++ LI C + ++ F ++ G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 257 VEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRH---------------RPNIVTYST 301
+P+V T+++L+ GLC S+A+ L M+ P ++T++T
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 302 LLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGG 361
L+NGLC EG++ EA ++++M +GL D YG I++ C +G + A N L +M
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 362 ITPNRLTWSLHIRIHNTVVQGLCKTDPNRAFQVYLS-MRNRSISVDSLTYSSLITCFCKK 420
I P+ + I++ ++ LCK + Q S M + I+ + TY+ +I FC
Sbjct: 292 IKPD-------VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 421 GDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELMNKCV 474
G + R++ +++ PD T++A+++A K+ + AE L E++++C+
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE-AEKLCDEMLHRCI 397
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 104/240 (43%), Gaps = 1/240 (0%)
Query: 35 FDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRG 94
FD A + D TF+ +I A + LL +++ + ++ G
Sbjct: 417 FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 95 YGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPC 154
+ V A +F +M G P + +L E +L+ A + ++ I
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 155 VASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELF 214
+ N++I +CK S +D A+ +F +P G PD TY +I+G C I +A LF
Sbjct: 537 TVAYNIIIHGMCKGS-KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLF 595
Query: 215 KEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKG 274
+M+ P TY +LI G ++ +++++ L EMRS G + FT + D + G
Sbjct: 596 HKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDG 655
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 204/399 (51%), Gaps = 9/399 (2%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G H+ T +++++ +Q A L ++ K + + F S+ G+ R R DA
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ +FD+M G +P Y T++ L + Q+ A M + GI P V + N LI
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
LC +SG A ++ M R PD +T+ LI+ + G++ EA+E ++EM ++ P
Sbjct: 231 LC-SSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL 284
+VTY+ LI GLC ++EA +F M SKG P+V TYS L++G CK M+L
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Query: 285 QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDI 344
M + N VTY+ L+ G C+ GKL A EI RM G+ P+ Y ++ CD
Sbjct: 350 CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409
Query: 345 GKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKT-DPNRAFQVYLSMRNRSI 403
GK ++A L +M G+ + +T+ N +++G+CK + A+ +Y S+ + +
Sbjct: 410 GKIEKALVILADMQKNGMDADIVTY-------NIIIRGMCKAGEVADAWDIYCSLNCQGL 462
Query: 404 SVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDE 442
D TY++++ KKG ++ + ++ DG LP+E
Sbjct: 463 MPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 179 bits (454), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 194/383 (50%), Gaps = 14/383 (3%)
Query: 103 DAMRVFDKMKEFGCEPTPK--SYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNV 160
D++ +F M + C P P + +L+ + + + + + M+ +GI + + N+
Sbjct: 64 DSLDLFFHMVQ--CRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 161 LIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETK 220
L+ C+ S + A +M G P T+G+L+NG CR ++Y+A +F +M
Sbjct: 122 LLNCFCRCS-QLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 221 ACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQA 280
P VV Y ++I+GLC+SK V+ A+ L M G+ P+V TY+SL+ GLC G S A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 281 MELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISC 340
++ M + P++ T++ L++ KEG++ EA E + M + L PD Y +I
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 341 FCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMR 399
C + EA MV G P+ +T+S+ ++ G CK+ +++ M
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI-------LINGYCKSKKVEHGMKLFCEMS 353
Query: 400 NRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMR 459
R + +++TY+ LI +C+ G ++ + I +V G P+ T++ ++ L D K+
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Query: 460 QAAELLLLELMNKCVEAEVDIQN 482
+A ++L ++ ++A++ N
Sbjct: 414 KAL-VILADMQKNGMDADIVTYN 435
Score = 179 bits (453), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 178/363 (49%), Gaps = 9/363 (2%)
Query: 104 AMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIK 163
A+ KM + G EP+ ++ ++L +++ A + M +G +P V N +I
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIID 194
Query: 164 ALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACS 223
LCK S +D A + M G PD TY +LI+GLC G+ +A + M +
Sbjct: 195 GLCK-SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY 253
Query: 224 PTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMEL 283
P V T+ +LI+ + V EA +EEM + ++P++ TYS L+ GLC +A E+
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM 313
Query: 284 LQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCD 343
M+SK P++VTYS L+NG CK K++ +++ M +G+ + Y +I +C
Sbjct: 314 FGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCR 373
Query: 344 IGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRS 402
GK A MV G+ PN +T+ N ++ GLC +A + M+
Sbjct: 374 AGKLNVAEEIFRRMVFCGVHPNIITY-------NVLLHGLCDNGKIEKALVILADMQKNG 426
Query: 403 ISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAA 462
+ D +TY+ +I CK G++ + I L G +PD T++ +M L+ + R+A
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREAD 486
Query: 463 ELL 465
L
Sbjct: 487 ALF 489
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 141/295 (47%), Gaps = 8/295 (2%)
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTS 231
+D + +F M P + L++ + ++ K L+++M+ + T
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 232 LINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKR 291
L+N C+ + A+ +M G EP++ T+ SL++G C+G A+ + M+
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 292 HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
++PN+V Y+T+++GLCK ++ A+++L+RM+ G+ PD Y +IS C G++ +A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 352 NFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRAFQVYLSMRNRSISVDSLTY 410
+ M I P+ T+ N ++ K + A + Y M RS+ D +TY
Sbjct: 242 RMVSCMTKREIYPDVFTF-------NALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Query: 411 SSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
S LI C + ++ + +V GC PD T+S ++ +K+ +L
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Score = 115 bits (287), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 142/278 (51%), Gaps = 9/278 (3%)
Query: 197 LINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKG 256
L NG+ R K+ ++ +LF M P++ ++ L++ + + K + + L+E+M+ G
Sbjct: 53 LRNGI-RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG 111
Query: 257 VEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAV 316
+ N+ T + L++ C+ S A+ L MI H P+IVT+ +LLNG C+ ++ +A+
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDAL 171
Query: 317 EILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIH 376
+ D+M G KP+ +Y II C + A + L+ M GI P+ +T+
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY------- 224
Query: 377 NTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVL 435
N+++ GLC + + A ++ M R I D T+++LI K+G + ++ +E++
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284
Query: 436 DGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELMNKC 473
PD T+S ++ L ++ +A E+ + C
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGC 322
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 210/423 (49%), Gaps = 10/423 (2%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G++ D TF+ ++ L N+ A L++R+ + C + ++ G + P A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ + +KM++ E Y T++ L + + AF + M GI+P V + N LI
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEM-ETKACS 223
LC N G A ++ +M + PD + LI+ + GK+ EA++L+ EM ++K C
Sbjct: 295 LC-NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 224 PTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMEL 283
P VV Y +LI G C+ K VEE M +F EM +G+ N TY++L+ G + A +
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 284 LQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCD 343
+ M+S P+I+TY+ LL+GLC G ++ A+ + + M+ + +K D Y +I C
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 344 IGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRAFQVYLSMRNRS 402
GK ++ + + L G+ PN +T++ T++ G C+ A +++ M+
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYT-------TMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 403 ISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAA 462
+S TY++LI + GD SA ++ E+ G D T+ V L D R +
Sbjct: 527 PLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFL 586
Query: 463 ELL 465
++L
Sbjct: 587 DML 589
Score = 185 bits (469), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 217/452 (48%), Gaps = 11/452 (2%)
Query: 20 QLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKE 79
+L+ A +NK ++ G H+ T+S+ I+ +Q A +L ++ K
Sbjct: 80 KLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKL 139
Query: 80 KCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLA 139
+ S+ G+ +R +A+ + D+M E G +P ++ T++ L + N+ A
Sbjct: 140 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 199
Query: 140 FRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLIN 199
M G QP + + +I LCK G D A + +M D Y T+I+
Sbjct: 200 VALVERMVVKGCQPDLVTYGAVINGLCKR-GEPDLALNLLNKMEKGKIEADVVIYNTIID 258
Query: 200 GLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEP 259
GLC+ + +A +LF +METK P V TY LI+ LC +A RL +M K + P
Sbjct: 259 GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINP 318
Query: 260 NVFTYSSLMDGLCKGGCSSQAMELLQMMISKRH-RPNIVTYSTLLNGLCKEGKLQEAVEI 318
++ +++L+D K G +A +L M+ +H P++V Y+TL+ G CK +++E +E+
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378
Query: 319 LDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNT 378
M +GL + Y +I F A +MV G+ P+ +T+ N
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY-------NI 431
Query: 379 VVQGLCKT-DPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDG 437
++ GLC + A V+ M+ R + +D +TY+++I CK G + + L L G
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 438 CLPDEGTWSAVMTALWDRRKMRQAAELLLLEL 469
P+ T++ +M+ R+ +++ A+ L +E+
Sbjct: 492 VKPNVVTYTTMMSGFC-RKGLKEEADALFVEM 522
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 196/400 (49%), Gaps = 33/400 (8%)
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
DA+ +F M + P+ + +L+ + + N+ L M+ +GI + + ++ I
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
C+ S + A I +M G P T +L+NG C +I EA L +M
Sbjct: 118 NYFCRRS-QLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME 282
P VT+T+L++GL Q EA+ L E M KG +P++ TY ++++GLCK G A+
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 283 LLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFC 342
LL M + ++V Y+T+++GLCK + +A ++ ++M+ +G+KPD Y +ISC C
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 343 DIGKYQEAANFLDEMVLGGITP-------------------------NRLTWSLH----I 373
+ G++ +A+ L +M+ I P + + S H +
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 374 RIHNTVVQGLCKTD-PNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDE 432
+NT+++G CK +V+ M R + +++TY++LI F + D + + +
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416
Query: 433 LVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELMNK 472
+V DG PD T++ ++ L + + A L++ E M K
Sbjct: 417 MVSDGVHPDIMTYNILLDGLCNNGNVETA--LVVFEYMQK 454
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 155/294 (52%), Gaps = 8/294 (2%)
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTS 231
+D A +F +M P + L++ + ++ K L ++M+ S + TY+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 232 LINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKR 291
IN C+ + A+ + +M G P++ T +SL++G C G S+A+ L+ M+
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 292 HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
++P+ VT++TL++GL + K EAV +++RM ++G +PD YG +I+ C G+ A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 352 NFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTY 410
N L++M G I + + I+NT++ GLCK + AF ++ M + I D TY
Sbjct: 236 NLLNKMEKGKIEAD-------VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 411 SSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAEL 464
+ LI+C C G ++R++ +++ PD ++A++ A K+ +A +L
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Score = 41.2 bits (95), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/189 (18%), Positives = 82/189 (43%), Gaps = 4/189 (2%)
Query: 13 ITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDL 72
+T ++ +D + A ++F ++ G D T+++++ L + A +
Sbjct: 392 VTYTTLIHGFFQARDCDNAQMVFKQMVSD---GVHPDIMTYNILLDGLCNNGNVETALVV 448
Query: 73 LDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVE 132
+ + K + + ++ + + D +F + G +P +Y T+++
Sbjct: 449 FEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Query: 133 ENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSY 192
+ + A + M+E G P + N LI+A ++ G A+ ++ +EM + G D+
Sbjct: 509 KGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRD-GDEAASAELIKEMRSCGFAGDAS 567
Query: 193 TYGTLINGL 201
T+G + N L
Sbjct: 568 TFGLVTNML 576
>sp|Q8LDU5|PP298_ARATH Pentatricopeptide repeat-containing protein At4g01400,
mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2
SV=2
Length = 466
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 193/384 (50%), Gaps = 11/384 (2%)
Query: 14 TSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLL 73
+ +V +LI ++ D A IFD A+ + FRH S+ ++I KL F +D+L
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYASQQ--PNFRHSRSSHLILILKLGRGRYFNLIDDVL 107
Query: 74 DRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILV-E 132
+ +T +IF + + Y P + F KM EF P PK +L +LV
Sbjct: 108 AKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSH 167
Query: 133 ENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSY 192
L+ AF ++ R G+ P S N+L++A C N + A+++F +M R PD
Sbjct: 168 RGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLND-DLSIAYQLFGKMLERDVVPDVD 226
Query: 193 TYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEM 252
+Y LI G CR G++ A EL +M K P ++YT+L+N LC+ + EA +L M
Sbjct: 227 SYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRM 286
Query: 253 RSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKL 312
+ KG P++ Y++++ G C+ + A ++L M+S PN V+Y TL+ GLC +G
Sbjct: 287 KLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMF 346
Query: 313 QEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLH 372
E + L+ M +G P + ++ FC GK +EA + ++ ++ G T + TW +
Sbjct: 347 DEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEM- 405
Query: 373 IRIHNTVVQGLCKTDPNRAFQVYL 396
V+ +C D + +++L
Sbjct: 406 ------VIPLICNEDESEKIKLFL 423
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 120/256 (46%), Gaps = 10/256 (3%)
Query: 229 YTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKG-GCSSQAMELLQMM 287
+T LI ++K E+ + F +M P + ++D L G +A EL +
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 288 ISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKY 347
PN +Y+ L+ C L A ++ +M + + PD Y +I FC G+
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 348 QEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLC-KTDPNRAFQVYLSMRNRSISVD 406
A LD+M+ G P+RL+++ T++ LC KT A+++ M+ + + D
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYT-------TLLNSLCRKTQLREAYKLLCRMKLKGCNPD 294
Query: 407 SLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLL 466
+ Y+++I FC++ + +++D+++ +GC P+ ++ ++ L D + M + L
Sbjct: 295 LVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCD-QGMFDEGKKYL 353
Query: 467 LELMNKCVEAEVDIQN 482
E+++K + N
Sbjct: 354 EEMISKGFSPHFSVSN 369
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 94/220 (42%), Gaps = 11/220 (5%)
Query: 261 VFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKE-GKLQEAVEIL 319
+FTY L+ + + + M+ P + +L+ L G LQ+A E+
Sbjct: 121 IFTY--LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELF 178
Query: 320 DRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTV 379
+L G+ P+ Y ++ FC A +M+ + P+ ++ + +
Sbjct: 179 KSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI-------L 231
Query: 380 VQGLC-KTDPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGC 438
+QG C K N A ++ M N+ D L+Y++L+ C+K + ++ +++ + L GC
Sbjct: 232 IQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGC 291
Query: 439 LPDEGTWSAVMTALWDRRKMRQAAELLLLELMNKCVEAEV 478
PD ++ ++ + A ++L L N C V
Sbjct: 292 NPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSV 331
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 213/422 (50%), Gaps = 10/422 (2%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G R T+++MI + A L + + + S+ G+G+V R D
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 316
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ F++MK+ CEP +Y ++ + +L + FYR M+ G++P V S + L+ A
Sbjct: 317 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 376
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
CK G M A K + +M G P+ YTY +LI+ C++G + +A L EM
Sbjct: 377 FCK-EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW 435
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL 284
VVTYT+LI+GLC ++ ++EA LF +M + GV PN+ +Y++L+ G K +A+ELL
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 285 QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDI 344
+ + +P+++ Y T + GLC K++ A +++ MK G+K ++ +Y ++ +
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 555
Query: 345 GKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRAFQVYLSMRNR-S 402
G E + LDEM L + + ++ GLCK ++A + + N
Sbjct: 556 GNPTEGLHLLDEM-------KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608
Query: 403 ISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAA 462
+ ++ ++++I CK + + + +++V G +PD ++++M + + + +A
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL 668
Query: 463 EL 464
L
Sbjct: 669 AL 670
Score = 185 bits (469), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 220/461 (47%), Gaps = 26/461 (5%)
Query: 21 LIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDR--VNK 78
L+ ++D A F + NGF+H ++ ++ L A + A +L ++K
Sbjct: 115 LVELKEDPKLAFKFFKWSMTR--NGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSK 172
Query: 79 EKCDITEDIFLS--IC-RGYGRVHRPL----------DAMRVFDKMKEFGCEPTPKSYIT 125
CD+ + ++ + +C G+G +A++ F KMK F P +S
Sbjct: 173 ADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNG 232
Query: 126 VLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNR 185
+L + + RF++ M G +P V + N++I +CK G ++AA +F EM R
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCK-EGDVEAARGLFEEMKFR 291
Query: 186 GCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEA 245
G PD+ TY ++I+G ++G++ + F+EM+ C P V+TY +LIN C+ +
Sbjct: 292 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG 351
Query: 246 MRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNG 305
+ + EM+ G++PNV +YS+L+D CK G QA++ M PN TY++L++
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Query: 306 LCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPN 365
CK G L +A + + M G++ + Y +I CD + +EA +M G+ PN
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 366 RLTWSLHIRIHNTVVQGLCKT-DPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIH 424
+ +N ++ G K + +RA ++ ++ R I D L Y + I C I
Sbjct: 472 -------LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 524
Query: 425 KSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
+ +++E+ G + ++ +M A + + LL
Sbjct: 525 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 169/360 (46%), Gaps = 26/360 (7%)
Query: 124 ITVLAILVE-ENQLKLAFRFYR-HMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFRE 181
I V +LVE + KLAF+F++ M G + V S ++ L DA + +E
Sbjct: 109 IWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDAN-SVLKE 167
Query: 182 M---------------PNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTV 226
M C P + L + L LG + EA + F +M+ P
Sbjct: 168 MVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKT 227
Query: 227 VTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQM 286
+ L++ + ++ R F++M G P VFTY+ ++D +CK G A L +
Sbjct: 228 RSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEE 287
Query: 287 MISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGK 346
M + P+ VTY+++++G K G+L + V + MK +PD Y +I+CFC GK
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Query: 347 YQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRAFQVYLSMRNRSISV 405
F EM G+ PN +++S T+V CK +A + Y+ MR +
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYS-------TLVDAFCKEGMMQQAIKFYVDMRRVGLVP 400
Query: 406 DSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
+ TY+SLI CK G++ + R+ +E++ G + T++A++ L D +M++A EL
Sbjct: 401 NEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF 460
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 11 TKITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAE 70
T +T ++ + K V+KA+ F+ + ++ G + + + F+ MI L NQ A
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF--GLQANAAIFTAMIDGLCKDNQVEAAT 633
Query: 71 DLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAIL 130
L +++ ++ + S+ G + L+A+ + DKM E G + +Y +++ L
Sbjct: 634 TLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 693
Query: 131 VEENQLKLAFRFYRHMREIGIQP 153
NQL+ A F M GI P
Sbjct: 694 SHCNQLQKARSFLEEMIGEGIHP 716
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 198/386 (51%), Gaps = 11/386 (2%)
Query: 83 ITEDI--FLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAF 140
I+ D+ F + + R R A+ V KM + G EP+ ++ ++L N++ AF
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 141 RFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLING 200
M + G +P V N LI LCKN G ++ A ++ EM +G D TY TL+ G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKN-GELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 201 LCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPN 260
LC G+ +A + ++M ++ +P VVT+T+LI+ + +++EA L++EM V+PN
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 261 VFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILD 320
TY+S+++GLC G A + +M SK PN+VTY+TL++G CK + E +++
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Query: 321 RMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVV 380
RM +G D Y +I +C +GK + A + MV +TP+ +T H ++
Sbjct: 341 RMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT-------HCILL 393
Query: 381 QGLC-KTDPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCL 439
GLC + A + MR + + Y+ +I CK + K+ + L ++G
Sbjct: 394 HGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVK 453
Query: 440 PDEGTWSAVMTALWDRRKMRQAAELL 465
PD T++ ++ L R+A EL+
Sbjct: 454 PDARTYTIMILGLCKNGPRREADELI 479
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 196/391 (50%), Gaps = 13/391 (3%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G HD +F+++I ++ A +L ++ K + + F S+ G+ V+R DA
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ M + G EP Y T++ L + +L +A M + G+ V + N L+
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
LC + DAA ++ R+M R PD T+ LI+ + G + EA+EL+KEM + P
Sbjct: 221 LCYSGRWSDAA-RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL 284
VTY S+INGLC + +A + F+ M SKG PNV TY++L+ G CK + M+L
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 285 QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDI 344
Q M + +I TY+TL++G C+ GKL+ A++I M + + PD + ++ C
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399
Query: 345 GKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSI 403
G+ + A D+M + I +N ++ GLCK D +A++++ + +
Sbjct: 400 GEIESALVKFDDM-------RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGV 452
Query: 404 SVDSLTYSSLITCFCKKGDIHKSARIVDELV 434
D+ TY+ +I CK G R DEL+
Sbjct: 453 KPDARTYTIMILGLCKNG----PRREADELI 479
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 168/360 (46%), Gaps = 9/360 (2%)
Query: 94 GYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQP 153
G+ R DA +F +M P+ + +L + + F + M GI
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 154 CVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKEL 213
+ S +LI C+ S + A + +M G P T+G+L++G C + +I +A L
Sbjct: 105 DLYSFTILIHCFCRCS-RLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163
Query: 214 FKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCK 273
M P VV Y +LI+GLC++ + A+ L EM KG+ +V TY++L+ GLC
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 274 GGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGL 333
G S A +L+ M+ + P++VT++ L++ K+G L EA E+ M + P+
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 334 YGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRAF 392
Y II+ C G+ +A D M G PN +T+ NT++ G CK +
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTY-------NTLISGFCKFRMVDEGM 336
Query: 393 QVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTAL 452
+++ M + D TY++LI +C+ G + + I +V PD T ++ L
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 160/335 (47%), Gaps = 1/335 (0%)
Query: 44 NGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLD 103
+G+ + ++ +I L + A +LL+ + K+ + ++ G R D
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 104 AMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIK 163
A R+ M + P ++ ++ + V++ L A Y+ M + + P + N +I
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 164 ALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACS 223
LC + DA K F M ++GC P+ TY TLI+G C+ + E +LF+ M + +
Sbjct: 290 GLCMHGRLYDAK-KTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 224 PTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMEL 283
+ TY +LI+G CQ + A+ +F M S+ V P++ T+ L+ GLC G A+
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 284 LQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCD 343
M IV Y+ +++GLCK K+++A E+ R+ ++G+KPDA Y +I C
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Query: 344 IGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNT 378
G +EA + M GI H+ H++
Sbjct: 469 NGPRREADELIRRMKEEGIICQMNAEDDHLEEHSS 503
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 156/331 (47%), Gaps = 15/331 (4%)
Query: 139 AFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLI 198
AF + M P + L+ A N + ++M G + D Y++ LI
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTA-TANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 199 NGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVE 258
+ CR ++ A + +M P++VT+ SL++G C + +A L M G E
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 259 PNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEI 318
PNV Y++L+DGLCK G + A+ELL M K ++VTY+TLL GLC G+ +A +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 319 LDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNT 378
L M + + PD + +I F G EA EM+ + PN +T+ N+
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY-------NS 286
Query: 379 VVQGLCKT----DPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELV 434
++ GLC D + F + M ++ + +TY++LI+ FCK + + ++ +
Sbjct: 287 IINGLCMHGRLYDAKKTFDL---MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 435 LDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
+G D T++ ++ K+R A ++
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIF 374
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 187/359 (52%), Gaps = 9/359 (2%)
Query: 104 AMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIK 163
A+ + KM + G EP+ + ++L ++ A M E+G +P + LI
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 164 ALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACS 223
L ++ +A + R M RGC P+ TYG ++NGLC+ G I A L +ME
Sbjct: 199 GLFLHNKASEAVALVDR-MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 257
Query: 224 PTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMEL 283
VV Y+++I+ LC+ + ++A+ LF EM +KGV PNV TYSSL+ LC S A L
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317
Query: 284 LQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCD 343
L MI ++ PN+VT++ L++ KEGKL EA ++ D M + + PD Y +I+ FC
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 377
Query: 344 IGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRS 402
+ EA + + M+ PN +T+ NT++ G CK + +++ M R
Sbjct: 378 HDRLDEAKHMFELMISKDCFPNVVTY-------NTLINGFCKAKRIDEGVELFREMSQRG 430
Query: 403 ISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQA 461
+ +++TY++LI F + D + + ++V DG P+ T++ ++ L K+ +A
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 178/334 (53%), Gaps = 8/334 (2%)
Query: 52 TFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKM 111
T+ ++++ L A +LL+++ K + I+ ++ + DA+ +F +M
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 112 KEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGT 171
+ G P +Y ++++ L + A R M E I P V + N LI A K G
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK-EGK 345
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTS 231
+ A K++ EM R PD +TY +LING C ++ EAK +F+ M +K C P VVTY +
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 232 LINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKR 291
LING C++K ++E + LF EM +G+ N TY++L+ G + A + + M+S
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 292 HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
PNI+TY+TLL+GLCK GKL++A+ + + ++ ++P Y +I C GK ++
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 352 NFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCK 385
+ + L G+ P+ + I+NT++ G C+
Sbjct: 526 DLFCSLSLKGVKPD-------VIIYNTMISGFCR 552
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 214/464 (46%), Gaps = 65/464 (14%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G H+ T++++I+ +Q A LL ++ K + + S+ GY R DA
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ + D+M E G P ++ T++ L N+ A M + G QP + + V++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 165 LCKNSGTMDAAF-----------------------------------KIFREMPNRGCTP 189
LCK G +D AF +F EM N+G P
Sbjct: 235 LCKR-GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
Query: 190 DSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLF 249
+ TY +LI+ LC + +A L +M + +P VVT+ +LI+ + + EA +L+
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 250 EEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKE 309
+EM + ++P++FTYSSL++G C +A + ++MISK PN+VTY+TL+NG CK
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 310 GKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTW 369
++ E VE+ M +GL + Y +I F A +MV G+ PN +T+
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 370 SL----------------------------HIRIHNTVVQGLCKTDP-NRAFQVYLSMRN 400
+ I +N +++G+CK + ++ S+
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 533
Query: 401 RSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGT 444
+ + D + Y+++I+ FC+KG ++ + ++ DG LPD GT
Sbjct: 534 KGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 179/364 (49%), Gaps = 9/364 (2%)
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
DA+ +F M + P+ + +L+ + + + L M+ +GI + + N+LI
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
C+ S + A + +M G P T +L+NG C +I +A L +M
Sbjct: 128 NCFCRRS-QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME 282
P +T+T+LI+GL EA+ L + M +G +PN+ TY +++GLCK G A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 283 LLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFC 342
LL M + + N+V YST+++ LCK +A+ + M+ +G++P+ Y +ISC C
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 343 DIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNR 401
+ ++ +A+ L +M+ I PN +T+ N ++ K A ++Y M R
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTF-------NALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 402 SISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQA 461
SI D TYSSLI FC + ++ + + ++ C P+ T++ ++ +++ +
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419
Query: 462 AELL 465
EL
Sbjct: 420 VELF 423
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 166/322 (51%), Gaps = 9/322 (2%)
Query: 153 PCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKE 212
P + N L+ A+ K D + +M G + + YTY LIN CR +I A
Sbjct: 83 PSIFEFNKLLSAIAKMK-KFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 141
Query: 213 LFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLC 272
L +M P++VT +SL+NG C K + +A+ L ++M G P+ T+++L+ GL
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 273 KGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAG 332
+S+A+ L+ M+ + +PN+VTY ++NGLCK G + A +L++M+ ++ +
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 333 LYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRA 391
+Y +I C +A N EM G+ PN +T+S +++ LC + + A
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS-------SLISCLCNYERWSDA 314
Query: 392 FQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTA 451
++ M R I+ + +T+++LI F K+G + ++ ++ DE++ PD T+S+++
Sbjct: 315 SRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 374
Query: 452 LWDRRKMRQAAELLLLELMNKC 473
++ +A + L + C
Sbjct: 375 FCMHDRLDEAKHMFELMISKDC 396
Score = 145 bits (365), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 162/312 (51%), Gaps = 9/312 (2%)
Query: 168 NSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVV 227
+S +D A +F M P + + L++ + ++ K L ++M+ S +
Sbjct: 62 HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLY 121
Query: 228 TYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMM 287
TY LIN C+ + A+ L +M G EP++ T SSL++G C G S A+ L+ M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 288 ISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKY 347
+ +RP+ +T++TL++GL K EAV ++DRM +G +P+ YG +++ C G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 348 QEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCK-TDPNRAFQVYLSMRNRSISVD 406
A N L++M I N + I++TV+ LCK + A ++ M N+ + +
Sbjct: 242 DLAFNLLNKMEAAKIEAN-------VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 407 SLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLL 466
+TYSSLI+C C ++R++ +++ P+ T++A++ A K+ + AE L
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE-AEKLY 353
Query: 467 LELMNKCVEAEV 478
E++ + ++ ++
Sbjct: 354 DEMIKRSIDPDI 365
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 205/373 (54%), Gaps = 12/373 (3%)
Query: 102 LDAMR-VFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNV 160
+D M+ V+ +M E P +Y ++ + ++ A ++ + E G+ P +
Sbjct: 199 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTS 258
Query: 161 LIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETK 220
LI C+ +D+AFK+F EMP +GC + Y LI+GLC +I EA +LF +M+
Sbjct: 259 LIMGYCQRK-DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDD 317
Query: 221 ACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQA 280
C PTV TYT LI LC S+ EA+ L +EM G++PN+ TY+ L+D LC +A
Sbjct: 318 ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKA 377
Query: 281 MELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISC 340
ELL M+ K PN++TY+ L+NG CK G +++AV++++ M+ + L P+ Y ++I
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 437
Query: 341 FCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKT-DPNRAFQVYLSMR 399
+C +A L++M+ + P+ +T+ N+++ G C++ + + A+++ M
Sbjct: 438 YCK-SNVHKAMGVLNKMLERKVLPDVVTY-------NSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 400 NRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMR 459
+R + D TY+S+I CK + ++ + D L G P+ ++A++ K+
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 460 QAAELLLLELMNK 472
+ A L+L ++++K
Sbjct: 550 E-AHLMLEKMLSK 561
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 214/471 (45%), Gaps = 44/471 (9%)
Query: 26 KDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITE 85
KD++ A +F+ + G R + ++ +I L A + A DL ++ ++C T
Sbjct: 267 KDLDSAFKVFNEMPLK---GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTV 323
Query: 86 DIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRH 145
+ + + R +A+ + +M+E G +P +Y ++ L + + + A
Sbjct: 324 RTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQ 383
Query: 146 MREIGIQPCVASLNVLIKALCKNSGTMDA------------------------------- 174
M E G+ P V + N LI CK DA
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV 443
Query: 175 --AFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSL 232
A + +M R PD TY +LI+G CR G A L M + P TYTS+
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 233 INGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRH 292
I+ LC+SK VEEA LF+ + KGV PNV Y++L+DG CK G +A +L+ M+SK
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 293 RPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAAN 352
PN +T++ L++GLC +GKL+EA + ++M GL+P +I G + A +
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 353 FLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYS 411
+M+ G P+ T++ T +Q C+ A + MR +S D TYS
Sbjct: 624 RFQQMLSSGTKPDAHTYT-------TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYS 676
Query: 412 SLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAA 462
SLI + G + + ++ + GC P + T+ +++ L + + +Q
Sbjct: 677 SLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 216/457 (47%), Gaps = 45/457 (9%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G D T++ +I A + + + + C E + + G R +A
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
M +F KMK+ C PT ++Y ++ L + A + M E GI+P + + VLI +
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
LC + A ++ +M +G P+ TY LING C+ G I +A ++ + ME++ SP
Sbjct: 368 LCSQC-KFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL 284
TY LI G C+S +V +AM + +M + V P+V TY+SL+DG C+ G A LL
Sbjct: 427 NTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 285 QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDI 344
+M + P+ TY+++++ LCK +++EA ++ D ++ +G+ P+ +Y +I +C
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 345 GKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKT------------------ 386
GK EA L++M+ PN LT+ N ++ GLC
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTF-------NALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 387 ------------------DPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSAR 428
D + A+ + M + D+ TY++ I +C++G + +
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 429 IVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
++ ++ +G PD T+S+++ D + A ++L
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVL 695
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 197/402 (49%), Gaps = 10/402 (2%)
Query: 52 TFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKM 111
T++ M++ A + ++ + D + S+ GY + A +VF++M
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279
Query: 112 KEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGT 171
GC +Y ++ L ++ A + M++ P V + VLIK+LC S
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC-GSER 338
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTS 231
A + +EM G P+ +TY LI+ LC K +A+EL +M K P V+TY +
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNA 398
Query: 232 LINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKR 291
LING C+ +E+A+ + E M S+ + PN TY+ L+ G CK +AM +L M+ ++
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERK 457
Query: 292 HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
P++VTY++L++G C+ G A +L M +GL PD Y +I C + +EA
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517
Query: 352 NFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTY 410
+ D + G+ PN + ++ ++ G CK + A + M +++ +SLT+
Sbjct: 518 DLFDSLEQKGVNPN-------VVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTF 570
Query: 411 SSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTAL 452
++LI C G + ++ + +++V G P T + ++ L
Sbjct: 571 NALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL 612
Score = 168 bits (426), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 225/494 (45%), Gaps = 85/494 (17%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G + + T++++I L S +F A +LL ++ ++ + ++ GY + DA
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ V + M+ P ++Y ++ + N K A M E + P V + N LI
Sbjct: 413 VDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDG 471
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
C+ SG D+A+++ M +RG PD +TY ++I+ LC+ ++ EA +LF +E K +P
Sbjct: 472 QCR-SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP 530
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLC------------ 272
VV YT+LI+G C++ V+EA + E+M SK PN T+++L+ GLC
Sbjct: 531 NVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLE 590
Query: 273 -----------------------KGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKE 309
K G A Q M+S +P+ TY+T + C+E
Sbjct: 591 EKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCRE 650
Query: 310 GKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTW 369
G+L +A +++ +M+ G+ PD Y +I + D+G+ A + L M G P++ T+
Sbjct: 651 GRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTF 710
Query: 370 ----------------------------------------------SLHIRIHNTVVQGL 383
+ + + + ++ G+
Sbjct: 711 LSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGI 770
Query: 384 CKTDPNR-AFQVYLSM-RNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPD 441
C+ R A +V+ M RN IS L +++L++C CK +++A++VD+++ G LP
Sbjct: 771 CEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQ 830
Query: 442 EGTWSAVMTALWDR 455
+ ++ L+ +
Sbjct: 831 LESCKVLICGLYKK 844
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 202/430 (46%), Gaps = 28/430 (6%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G D T++ MI L + + A DL D + ++ + ++ ++ GY + + +A
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ +KM C P ++ ++ L + +LK A M +IG+QP V++ +LI
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHR 611
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
L K+ G D A+ F++M + G PD++TY T I CR G++ +A+++ +M SP
Sbjct: 612 LLKD-GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP 670
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLC-------KGG-- 275
+ TY+SLI G A + + MR G EP+ T+ SL+ L KG
Sbjct: 671 DLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEP 730
Query: 276 --CSSQAM-------ELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKL-Q 325
C+ M ELL+ M+ PN +Y L+ G+C+ G L+ A ++ D M+ +
Sbjct: 731 ELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNE 790
Query: 326 GLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCK 385
G+ P ++ ++SC C + K+ EAA +D+M+ G P + ++ GL K
Sbjct: 791 GISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLP-------QLESCKVLICGLYK 843
Query: 386 T-DPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGT 444
+ R V+ ++ D L + +I K+G + + + + +GC T
Sbjct: 844 KGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQT 903
Query: 445 WSAVMTALWD 454
+S ++ D
Sbjct: 904 YSLLIEGPPD 913
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 127/296 (42%), Gaps = 28/296 (9%)
Query: 35 FDSATAEY----ANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFL- 89
FD A + + ++G + D T++ I + AED++ ++ + ++ D+F
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN--GVSPDLFTY 675
Query: 90 -SICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEEN-------------- 134
S+ +GYG + + A V +M++ GCEP+ ++++++ L+E
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAM 735
Query: 135 ----QLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMP-NRGCTP 189
+ M E + P S LI +C+ G + A K+F M N G +P
Sbjct: 736 SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICE-VGNLRVAEKVFDHMQRNEGISP 794
Query: 190 DSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLF 249
+ L++ C+L K EA ++ +M P + + LI GL + E +F
Sbjct: 795 SELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVF 854
Query: 250 EEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNG 305
+ + G + + ++DG+ K G EL +M + + TYS L+ G
Sbjct: 855 QNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 367 LTWSLHIRIHNTVVQGLCKTD-PNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHK 425
L + L I +NT++ L + + QVY+ M + + TY+ ++ +CK G++ +
Sbjct: 177 LKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEE 236
Query: 426 SARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELMNKCVEAEV 478
+ + V ++V G PD T+++++ R+ + A ++ + C EV
Sbjct: 237 ANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEV 289
>sp|Q9SYK1|PPR11_ARATH Pentatricopeptide repeat-containing protein At1g05600
OS=Arabidopsis thaliana GN=At1g05600 PE=2 SV=1
Length = 504
Score = 188 bits (478), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 253/482 (52%), Gaps = 28/482 (5%)
Query: 5 TMFKWSTKITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSAN 64
++ +W +T + + Q+++ +K+ AL +F+ A + + + H+ S ++ MI L +N
Sbjct: 2 SVVRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPS-YGHNGSVYATMIDILGKSN 60
Query: 65 QFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYI 124
+ + +++R+ ++ C+ + +F S+ R + R R DA+ +F + EF C S+
Sbjct: 61 RVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFD 120
Query: 125 TVLAILVEENQLKLA---FRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFRE 181
T+L +V+E++L+ A FR Y + E+ + + +LN+L+K LC+ + + D A ++F+E
Sbjct: 121 TLLQEMVKESELEAACHIFRKYCYGWEVNSR--ITALNLLMKVLCQVNRS-DLASQVFQE 177
Query: 182 MPNRGCTPDSYTYGTLINGLCRLGKIYEAKEL----FKEMETKACSPTVVTYTSLINGLC 237
M +GC PD +Y L+ G C GK+ EA L F + K +V Y L++ LC
Sbjct: 178 MNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALC 237
Query: 238 QSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME----LLQMMISKRHR 293
+ V++A+ + ++ KG++ Y + G + SS+ +E LL + +
Sbjct: 238 DAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWES--SSEGIERVKRLLTETLIRGAI 295
Query: 294 PNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANF 353
P + +YS + L +EGKL E E+L M+ +G +P +YG + C GK +EA +
Sbjct: 296 PCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSV 355
Query: 354 LD-EMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPNRAFQVYLSMRNRSIS--VDSLTY 410
++ EM+ G P + ++N +++GLC + YL ++ +S + TY
Sbjct: 356 INKEMMQGHCLPT-------VGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETY 408
Query: 411 SSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELM 470
+L+ C+ G +++++++E+++ P T+ ++ L D + R A + L E++
Sbjct: 409 QTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDR-RYEAVMWLEEMV 467
Query: 471 NK 472
++
Sbjct: 468 SQ 469
Score = 105 bits (263), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 7/200 (3%)
Query: 150 GIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYE 209
G PC+ S + + L + G + ++ M ++G P + YG + LCR GK+ E
Sbjct: 293 GAIPCLDSYSAMATDLFEE-GKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKE 351
Query: 210 AKELF-KEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVE--PNVFTYSS 266
A + KEM C PTV Y LI GLC EA+ ++M SK V N TY +
Sbjct: 352 AVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM-SKQVSCVANEETYQT 410
Query: 267 LMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQG 326
L+DGLC+ G +A ++++ M+ K H P + TY ++ GLC + EAV L+ M Q
Sbjct: 411 LVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQD 470
Query: 327 LKPDAGLYGKIIS--CFCDI 344
+ P++ ++ + CFC I
Sbjct: 471 MVPESSVWKALAESVCFCAI 490
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 140/317 (44%), Gaps = 46/317 (14%)
Query: 97 RVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLK----LAFRFYRHMREIGIQ 152
+V+R A +VF +M GC P SY ++ E +L+ L + + + + G
Sbjct: 164 QVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSG 223
Query: 153 PCVASLNVLIKALCKNSGTMDAAFKIF--------------------------------- 179
+ +L+ ALC ++G +D A +I
Sbjct: 224 EDIVVYRILLDALC-DAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERV 282
Query: 180 ----REMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLING 235
E RG P +Y + L GK+ E +E+ M +K PT Y + +
Sbjct: 283 KRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKA 342
Query: 236 LCQSKSVEEAMRLF-EEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHR- 293
LC++ ++EA+ + +EM P V Y+ L+ GLC G S +A+ L+ M SK+
Sbjct: 343 LCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM-SKQVSC 401
Query: 294 -PNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAAN 352
N TY TL++GLC++G+ EA ++++ M ++ P Y +I CD+ + EA
Sbjct: 402 VANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVM 461
Query: 353 FLDEMVLGGITPNRLTW 369
+L+EMV + P W
Sbjct: 462 WLEEMVSQDMVPESSVW 478
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 15/236 (6%)
Query: 57 ISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGC 116
+ +L++ R A LD + D+ E+ G++ ++ V M+ G
Sbjct: 282 VKRLLTETLIRGAIPCLDSYSAMATDLFEE---------GKL---VEGEEVLLAMRSKGF 329
Query: 117 EPTPKSYITVLAILVEENQLKLAFRFY-RHMREIGIQPCVASLNVLIKALCKNSGTMDAA 175
EPTP Y + L +LK A + M + P V NVLIK LC + +M+A
Sbjct: 330 EPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAV 389
Query: 176 FKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLING 235
+ + C + TY TL++GLCR G+ EA ++ +EM K+ P V TY +I G
Sbjct: 390 GYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKG 449
Query: 236 LCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKR 291
LC EA+ EEM S+ + P + +L + +C C+ +E+L+ +IS +
Sbjct: 450 LCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC--FCAIDVVEILEHLISSK 503
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 188 bits (478), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 188/369 (50%), Gaps = 30/369 (8%)
Query: 110 KMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNS 169
KM + G P+ + ++L + N+ + A M G P V N +I LCKN
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 170 GTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTY 229
++ A ++F M +G D+ TY TLI+GL G+ +A L ++M + P V+ +
Sbjct: 199 -DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257
Query: 230 TSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMIS 289
T+LI+ + ++ EA L++EM + V PNVFTY+SL++G C GC A + +M+S
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 290 KRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQE 349
K P++VTY+TL+ G CK ++++ +++ M QGL DA Y +I +C GK
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377
Query: 350 AANFLDEMVLGGITPNRLTWSL----------------------------HIRIHNTVVQ 381
A + MV G++P+ +T+++ I +N ++Q
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQ 437
Query: 382 GLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLP 440
GLC+TD A+ ++ S+ + + D++ Y ++I+ C+KG ++ ++ + DG +P
Sbjct: 438 GLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
Query: 441 DEGTWSAVM 449
E + +
Sbjct: 498 SERIYDETL 506
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 195/384 (50%), Gaps = 12/384 (3%)
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
DA +F +M + P+ + VL ++ + N+ + Y M +GI + S +LI
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
C+ + A + +M G P T G+L+NG C+ + EA L M+
Sbjct: 122 HCFCR-CSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME 282
P VV Y ++INGLC+++ + A+ +F M KG+ + TY++L+ GL G + A
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 283 LLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFC 342
LL+ M+ ++ PN++ ++ L++ KEG L EA + M + + P+ Y +I+ FC
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 343 DIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRAFQVYLSMRNR 401
G +A D MV G P+ +T+ NT++ G CK+ +++ M +
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTY-------NTLITGFCKSKRVEDGMKLFCEMTYQ 353
Query: 402 SISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQA 461
+ D+ TY++LI +C+ G ++ + ++ + +V G PD T++ ++ L + K+ +A
Sbjct: 354 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Query: 462 AELLLLELMNKCVEAEVDIQNQDV 485
L+++E + K E +VDI ++
Sbjct: 414 --LVMVEDLQKS-EMDVDIITYNI 434
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 142/289 (49%), Gaps = 1/289 (0%)
Query: 90 SICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREI 149
++ G R DA R+ M + +P + ++ V+E L A Y+ M
Sbjct: 224 TLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR 283
Query: 150 GIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYE 209
+ P V + N LI C + DA + +F M ++GC PD TY TLI G C+ ++ +
Sbjct: 284 SVVPNVFTYNSLINGFCIHGCLGDAKY-MFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 342
Query: 210 AKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMD 269
+LF EM + TY +LI+G CQ+ + A ++F M GV P++ TY+ L+D
Sbjct: 343 GMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD 402
Query: 270 GLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKP 329
LC G +A+ +++ + +I+TY+ ++ GLC+ KL+EA + + +G+KP
Sbjct: 403 CLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 462
Query: 330 DAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNT 378
DA Y +IS C G +EA M G P+ + +R H T
Sbjct: 463 DAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYT 511
Score = 132 bits (331), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 148/294 (50%), Gaps = 6/294 (2%)
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTS 231
D AF +F EM P + ++ + ++ K L+ +ME S + ++T
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 232 LINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKR 291
LI+ C+ + A+ L +M G P++ T SL++G C+G +A+ L+ M
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 292 HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
PN+V Y+T++NGLCK L A+E+ M+ +G++ DA Y +IS + G++ +AA
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 352 NFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPNRAFQVYLSMRNRSISVDSLTYS 411
L +MV I PN + ++ I +T V+ + + A +Y M RS+ + TY+
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALI---DTFVK---EGNLLEARNLYKEMIRRSVVPNVFTYN 293
Query: 412 SLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
SLI FC G + + + D +V GC PD T++ ++T +++ +L
Sbjct: 294 SLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 347
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Query: 90 SICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREI 149
++ GY + + A +VF++M + G P +Y +L L +++ A +++
Sbjct: 364 TLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKS 423
Query: 150 GIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYE 209
+ + + N++I+ LC+ + + A+ +FR + +G PD+ Y T+I+GLCR G E
Sbjct: 424 EMDVDIITYNIIIQGLCR-TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQRE 482
Query: 210 AKELFKEMETKACSPTVVTYTSLINGLCQSKSVE 243
A +L + M+ P+ Y + S S E
Sbjct: 483 ADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAE 516
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 188 bits (478), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 223/439 (50%), Gaps = 12/439 (2%)
Query: 28 VNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDI 87
V+ A+++ D GF+ + T+ ++ + + Q A +LL ++ + K +
Sbjct: 193 VSDAVLLIDRMVE---TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 88 FLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMR 147
+ I G + +A +F++M+ G + Y T++ + + R M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 148 EIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKI 207
+ I P V + + LI K G + A ++ +EM RG +PD+ TY +LI+G C+ ++
Sbjct: 310 KRKITPDVVAFSALIDCFVK-EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 208 YEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSL 267
+A + M +K C P + T+ LING C++ +++ + LF +M +GV + TY++L
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 268 MDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGL 327
+ G C+ G A EL Q M+S+R RP+IV+Y LL+GLC G+ ++A+EI ++++ +
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 328 KPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD 387
+ D G+Y II C+ K +A + + L G+ P+ ++ +N ++ GLCK
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD-------VKTYNIMIGGLCKKG 541
Query: 388 P-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWS 446
+ A ++ M S + TY+ LI +GD KSA++++E+ G D T
Sbjct: 542 SLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVK 601
Query: 447 AVMTALWDRRKMRQAAELL 465
V+ L D R + ++L
Sbjct: 602 MVVDMLSDGRLKKSFLDML 620
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 196/377 (51%), Gaps = 19/377 (5%)
Query: 87 IFLSICRGYGRVH------------RPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEEN 134
+F S+ G G+V + DA+ +F +M P + + +++
Sbjct: 27 VFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTK 86
Query: 135 QLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTY 194
Q L + M GI + +L+++I C+ + AF ++ G PD+ T+
Sbjct: 87 QYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCR-KLSLAFSAMGKIIKLGYEPDTVTF 145
Query: 195 GTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRS 254
TLINGLC G++ EA EL M PT++T +L+NGLC + V +A+ L + M
Sbjct: 146 STLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE 205
Query: 255 KGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQE 314
G +PN TY ++ +CK G ++ AMELL+ M ++ + + V YS +++GLCK+G L
Sbjct: 206 TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN 265
Query: 315 AVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIR 374
A + + M+++G K D +Y +I FC G++ + A L +M+ ITP+ + +S I
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Query: 375 IHNTVVQGLCKTDPNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELV 434
V +G + A +++ M R IS D++TY+SLI FCK+ + K+ ++D +V
Sbjct: 326 CF--VKEGKLR----EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 435 LDGCLPDEGTWSAVMTA 451
GC P+ T++ ++
Sbjct: 380 SKGCGPNIRTFNILING 396
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/485 (25%), Positives = 222/485 (45%), Gaps = 65/485 (13%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G H+ T S+MI+ + A + ++ K + F ++ G R +A
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 105 MRVFDKMKEFGCEPT---------------------------------PK--SYITVLAI 129
+ + D+M E G +PT P +Y VL +
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221
Query: 130 LVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTP 189
+ + Q LA R M E I+ +++I LCK+ G++D AF +F EM +G
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD-GSLDNAFNLFNEMEIKGFKA 280
Query: 190 DSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLF 249
D Y TLI G C G+ + +L ++M + +P VV +++LI+ + + EA L
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 250 EEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKE 309
+EM +G+ P+ TY+SL+DG CK +A +L +M+SK PNI T++ L+NG CK
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 310 GKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTW 369
+ + +E+ +M L+G+ D Y +I FC++GK + A EMV + P+ +++
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 370 ----------------------------SLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRN 400
L I I+N ++ G+C + A+ ++ S+
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 401 RSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQ 460
+ + D TY+ +I CKKG + ++ + ++ DG P+ T++ ++ A +
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK 580
Query: 461 AAELL 465
+A+L+
Sbjct: 581 SAKLI 585
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 152/302 (50%), Gaps = 8/302 (2%)
Query: 173 DAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSL 232
D + ++M +G + YT +IN CR K+ A ++ P VT+++L
Sbjct: 89 DLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTL 148
Query: 233 INGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRH 292
INGLC V EA+ L + M G +P + T ++L++GLC G S A+ L+ M+
Sbjct: 149 INGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF 208
Query: 293 RPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAAN 352
+PN VTY +L +CK G+ A+E+L +M+ + +K DA Y II C G A N
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN 268
Query: 353 FLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYS 411
+EM + G + I I+ T+++G C + ++ M R I+ D + +S
Sbjct: 269 LFNEMEIKGFKAD-------IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 412 SLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELMN 471
+LI CF K+G + ++ + E++ G PD T+++++ ++ +A +L L +
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 472 KC 473
C
Sbjct: 382 GC 383
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 148/293 (50%), Gaps = 8/293 (2%)
Query: 173 DAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSL 232
D A +F+EM P + L + + R + +L K+ME K + + T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 233 INGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRH 292
IN C+ + + A ++ G EP+ T+S+L++GLC G S+A+EL+ M+ H
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 293 RPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAAN 352
+P ++T + L+NGLC GK+ +AV ++DRM G +P+ YG ++ C G+ A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 353 FLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYS 411
L +M I + + +S+ ++ GLCK + AF ++ M + D + Y+
Sbjct: 234 LLRKMEERKIKLDAVKYSI-------IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYT 286
Query: 412 SLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAEL 464
+LI FC G A+++ +++ PD +SA++ K+R+A EL
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 188 bits (477), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 204/415 (49%), Gaps = 14/415 (3%)
Query: 52 TFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRV-FDK 110
FSL+I + + F E+ L + KC LSI G R R D++ V +
Sbjct: 134 VFSLLIMEFLEMGLF---EEALWVSREMKCSPDSKACLSILNGLVR-RRRFDSVWVDYQL 189
Query: 111 MKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSG 170
M G P Y + ++ + M +GI+P V + I LC+++
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDN- 248
Query: 171 TMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYT 230
M+ A K+F M G P+ YTY +I+G C+ G + +A L+KE+ P VV +
Sbjct: 249 KMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFG 308
Query: 231 SLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISK 290
+L++G C+++ + A LF M GV+PN++ Y+ L+ G CK G +A+ LL M S
Sbjct: 309 TLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL 368
Query: 291 RHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEA 350
P++ TY+ L+NGLC E ++ EA + +MK + + P + Y +I +C ++A
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQA 428
Query: 351 ANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKT-DPNRAFQVYLSMRNRSISVDSLT 409
+ EM G+ PN +T+S T++ G C D A +Y M + I D +T
Sbjct: 429 LDLCSEMTASGVEPNIITFS-------TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVT 481
Query: 410 YSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAEL 464
Y++LI K+ ++ ++ R+ +++ G P++ T++ ++ W ++ A +
Sbjct: 482 YTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDF 536
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 193/398 (48%), Gaps = 9/398 (2%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G + + +++ I L N+ AE + + + K + ++ GY + A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
++ ++ P + T++ + +L A + HM + G+ P + N LI
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHG 348
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
CK SG M A + EM + +PD +TY LINGLC ++ EA LF++M+ + P
Sbjct: 349 HCK-SGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP 407
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL 284
+ TY SLI+G C+ ++E+A+ L EM + GVEPN+ T+S+L+DG C AM L
Sbjct: 408 SSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLY 467
Query: 285 QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDI 344
M K P++VTY+ L++ KE ++EA+ + M G+ P+ + ++ F
Sbjct: 468 FEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKE 527
Query: 345 GKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPN-RAFQVYLSMRNRSI 403
G+ A +F E R W+ H+ +++GLC+ RA + + MR+ I
Sbjct: 528 GRLSVAIDFYQEN-----NQQRSCWN-HVGF-TCLIEGLCQNGYILRASRFFSDMRSCGI 580
Query: 404 SVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPD 441
+ D +Y S++ ++ I + + +++ G LP+
Sbjct: 581 TPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
Score = 99.0 bits (245), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 129/277 (46%), Gaps = 1/277 (0%)
Query: 49 DNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVF 108
D T++++I+ L +Q A L ++ E+ + + S+ GY + + A+ +
Sbjct: 373 DVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLC 432
Query: 109 DKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKN 168
+M G EP ++ T++ +K A Y M GI P V + LI A K
Sbjct: 433 SEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKE 492
Query: 169 SGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVT 228
+ M A +++ +M G P+ +T+ L++G + G++ A + ++E + V
Sbjct: 493 A-NMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVG 551
Query: 229 YTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMI 288
+T LI GLCQ+ + A R F +MRS G+ P++ +Y S++ G + + M L MI
Sbjct: 552 FTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMI 611
Query: 289 SKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQ 325
PN++ L G ++ A + + +L+
Sbjct: 612 KTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRLK 648
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 301 TLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLG 360
++LNGL + + M +GL PD +Y + C G Y + LDEM
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228
Query: 361 GITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCK 419
GI PN + I+ + LC+ + A +++ M+ + + TYS++I +CK
Sbjct: 229 GIKPN-------VYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK 281
Query: 420 KGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLL 466
G++ ++ + E+++ LP+ + ++ R++ A L +
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFV 328
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 34/244 (13%)
Query: 235 GLCQSKSVEEAMRLFE-EMRSKGVEPN-VFTYSSLMDGLCKGGCSSQAMELLQMMIS--K 290
+ + +S EEA +LFE RS+ + N + ++S+++ L + A L++ +I K
Sbjct: 47 AILKCRSAEEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLK 106
Query: 291 RH-RPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQE 349
RH P+ +++ +L A+E +Q K G++ +I F ++G ++E
Sbjct: 107 RHSEPSNMSH-----------RLFNALE-----DIQSPKFSIGVFSLLIMEFLEMGLFEE 150
Query: 350 AANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPNRAFQV-YLSMRNRSISVDSL 408
A EM +P+ + +++ GL + + V Y M +R + D
Sbjct: 151 ALWVSREM---KCSPDS-------KACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVH 200
Query: 409 TYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLE 468
Y L C K+G K +++DE+ G P+ ++ + L KM +A + + E
Sbjct: 201 IYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEK--MFE 258
Query: 469 LMNK 472
LM K
Sbjct: 259 LMKK 262
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 218/415 (52%), Gaps = 18/415 (4%)
Query: 52 TFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDI----FLSICRGYGRVHRPLDAMRV 107
++ MI SA +F A LL+R + K I I L+ R G+V +A++V
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLER-QRAKGSIPSVIAYNCILTCLRKMGKVD---EALKV 365
Query: 108 FDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCK 167
F++MK+ P +Y ++ +L +L AF M++ G+ P V ++N+++ LCK
Sbjct: 366 FEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCK 424
Query: 168 NSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVV 227
S +D A +F EM + CTPD T+ +LI+GL ++G++ +A +++++M C +
Sbjct: 425 -SQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSI 483
Query: 228 TYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMM 287
YTSLI E+ +++++M ++ P++ ++ MD + K G + + + +
Sbjct: 484 VYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI 543
Query: 288 ISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKY 347
++R P+ +YS L++GL K G E E+ MK QG D Y +I FC GK
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV 603
Query: 348 QEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVD 406
+A L+EM G P +T+ +V+ GL K D + A+ ++ +++ I ++
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYG-------SVIDGLAKIDRLDEAYMLFEEAKSKRIELN 656
Query: 407 SLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQA 461
+ YSSLI F K G I ++ I++EL+ G P+ TW++++ AL ++ +A
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEA 711
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 205/415 (49%), Gaps = 9/415 (2%)
Query: 52 TFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKM 111
T ++M+ +L + + A + + ++ + C E F S+ G G+V R DA +V++KM
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473
Query: 112 KEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGT 171
+ C Y +++ + + + Y+ M P + LN + + K +G
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK-AGE 532
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTS 231
+ +F E+ R PD+ +Y LI+GL + G E ELF M+ + C Y
Sbjct: 533 PEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI 592
Query: 232 LINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKR 291
+I+G C+ V +A +L EEM++KG EP V TY S++DGL K +A L + SKR
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 292 HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
N+V YS+L++G K G++ EA IL+ + +GL P+ + ++ + EA
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEAL 712
Query: 352 NFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTY 410
M TPN++T+ + ++ GLCK N+AF + M+ + + +++Y
Sbjct: 713 VCFQSMKELKCTPNQVTYGI-------LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765
Query: 411 SSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
+++I+ K G+I ++ + D +G +PD ++A++ L + + A L
Sbjct: 766 TTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820
Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 188/398 (47%), Gaps = 10/398 (2%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
GF +T M+ V AN+ R D++ + K K + ++ + V+
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ +F +M+E G EPT + T++ +E ++ A M+ + + NV I +
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
K G +D A+K F E+ G PD TY ++I LC+ ++ EA E+F+ +E P
Sbjct: 248 FGK-VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 306
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL 284
Y ++I G + +EA L E R+KG P+V Y+ ++ L K G +A+++
Sbjct: 307 CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVF 366
Query: 285 QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDI 344
+ M K PN+ TY+ L++ LC+ GKL A E+ D M+ GL P+ ++ C
Sbjct: 367 EEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKS 425
Query: 345 GKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSI 403
K EA +EM TP+ +T+ +++ GL K + A++VY M +
Sbjct: 426 QKLDEACAMFEEMDYKVCTPDEITFC-------SLIDGLGKVGRVDDAYKVYEKMLDSDC 478
Query: 404 SVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPD 441
+S+ Y+SLI F G +I +++ C PD
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/513 (23%), Positives = 226/513 (44%), Gaps = 44/513 (8%)
Query: 3 VKTMFKWSTKITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVS 62
V+ M K+ + + LI A VN + ++ G+ F+ +I
Sbjct: 156 VQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAK 215
Query: 63 ANQFRPAEDLLDRVNKEKCDITEDIFLSIC-RGYGRVHRPLDAMRVFDKMKEFGCEPTPK 121
+ A LLD + D + + ++C +G+V + A + F +++ G +P
Sbjct: 216 EGRVDSALSLLDEMKSSSLD-ADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274
Query: 122 SYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKAL---------------- 165
+Y +++ +L + N+L A + H+ + PC + N +I
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 166 ------------------CKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKI 207
+ G +D A K+F EM + P+ TY LI+ LCR GK+
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKL 393
Query: 208 YEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSL 267
A EL M+ P V T +++ LC+S+ ++EA +FEEM K P+ T+ SL
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453
Query: 268 MDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGL 327
+DGL K G A ++ + M+ R N + Y++L+ G+ ++ +I M Q
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513
Query: 328 KPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD 387
PD L + C G+ ++ +E+ P+ ++S I IH + G
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYS--ILIHGLIKAGFA--- 568
Query: 388 PNRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSA 447
N ++++ SM+ + +D+ Y+ +I FCK G ++K+ ++++E+ G P T+ +
Sbjct: 569 -NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 448 VMTALWDRRKMRQAAELLLLELMNKCVEAEVDI 480
V+ L ++ +A +L E +K +E V I
Sbjct: 628 VIDGLAKIDRLDEAY-MLFEEAKSKRIELNVVI 659
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 171/355 (48%), Gaps = 11/355 (3%)
Query: 100 RPLDAM-RVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASL 158
R DA+ ++ +M G P+ + I ++ V+ N+L+ + + MR+ +P ++
Sbjct: 112 RNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAY 171
Query: 159 NVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEME 218
LI A + + D +F++M G P + + TLI G + G++ A L EM+
Sbjct: 172 TTLIGAFSAVNHS-DMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMK 230
Query: 219 TKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSS 278
+ + +V Y I+ + V+ A + F E+ + G++P+ TY+S++ LCK
Sbjct: 231 SSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLD 290
Query: 279 QAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKII 338
+A+E+ + + R P Y+T++ G GK EA +L+R + +G P Y I+
Sbjct: 291 EAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Query: 339 SCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLS 397
+C +GK EA +EM PN T+ N ++ LC+ + AF++ S
Sbjct: 351 TCLRKMGKVDEALKVFEEMKKDA-APNLSTY-------NILIDMLCRAGKLDTAFELRDS 402
Query: 398 MRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTAL 452
M+ + + T + ++ CK + ++ + +E+ C PDE T+ +++ L
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 146/285 (51%), Gaps = 1/285 (0%)
Query: 43 ANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPL 102
A F D ++S++I L+ A +L + ++ C + + + G+ + +
Sbjct: 545 ARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN 604
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
A ++ ++MK G EPT +Y +V+ L + ++L A+ + + I+ V + LI
Sbjct: 605 KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
K G +D A+ I E+ +G TP+ YT+ +L++ L + +I EA F+ M+ C
Sbjct: 665 DGFGK-VGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKC 723
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME 282
+P VTY LINGLC+ + +A ++EM+ +G++P+ +Y++++ GL K G ++A
Sbjct: 724 TPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA 783
Query: 283 LLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGL 327
L + P+ Y+ ++ GL + +A + + + +GL
Sbjct: 784 LFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 154/349 (44%), Gaps = 12/349 (3%)
Query: 117 EPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAF 176
+P P+ I VL L + N+ FR+Y E+ P + +L+ A C+N DA
Sbjct: 62 KPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRN---FDALD 118
Query: 177 KIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGL 236
+I EM G P T ++ G + K+ E ++ + M P YT+LI
Sbjct: 119 QILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAF 178
Query: 237 CQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNI 296
+ + LF++M+ G EP V +++L+ G K G A+ LL M S +I
Sbjct: 179 SAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADI 238
Query: 297 VTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDE 356
V Y+ ++ K GK+ A + ++ GLKPD Y +I C + EA +
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298
Query: 357 MVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLIT 415
+ P T++ +NT++ G + A+ + R + + Y+ ++T
Sbjct: 299 LEKNRRVP--CTYA-----YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILT 351
Query: 416 CFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAEL 464
C K G + ++ ++ +E+ D P+ T++ ++ L K+ A EL
Sbjct: 352 CLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFEL 399
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 121/253 (47%), Gaps = 4/253 (1%)
Query: 28 VNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDI 87
VNKA + + + GF T+ +I L ++ A L + ++ ++ I
Sbjct: 603 VNKAYQLLEEMKTK---GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 88 FLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMR 147
+ S+ G+G+V R +A + +++ + G P ++ ++L LV+ ++ A ++ M+
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK 719
Query: 148 EIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKI 207
E+ P + +LI LCK + AF ++EM +G P + +Y T+I+GL + G I
Sbjct: 720 ELKCTPNQVTYGILINGLCKVR-KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNI 778
Query: 208 YEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSL 267
EA LF + P Y ++I GL +A LFEE R +G+ + T L
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVL 838
Query: 268 MDGLCKGGCSSQA 280
+D L K C QA
Sbjct: 839 LDTLHKNDCLEQA 851
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 132/295 (44%), Gaps = 19/295 (6%)
Query: 181 EMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSK 240
E+P+ P+SY L+ CR ++ EM P+V T ++ G ++
Sbjct: 93 ELPH---CPESYNSLLLVMARCR--NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKAN 147
Query: 241 SVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYS 300
+ E + + MR P Y++L+ S + L Q M + P + ++
Sbjct: 148 KLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFT 207
Query: 301 TLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLG 360
TL+ G KEG++ A+ +LD MK L D LY I F +GK A F E+
Sbjct: 208 TLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN 267
Query: 361 GITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSM-RNRSISVDSLTYSSLITCFC 418
G+ P+ +T++ I + LCK + + A +++ + +NR + + Y+++I +
Sbjct: 268 GLKPDEVTYTSMIGV-------LCKANRLDEAVEMFEHLEKNRRVPC-TYAYNTMIMGYG 319
Query: 419 KKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL-LLELMNK 472
G ++ +++ G +P ++ ++T L RKM + E L + E M K
Sbjct: 320 SAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCL---RKMGKVDEALKVFEEMKK 371
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 223/438 (50%), Gaps = 12/438 (2%)
Query: 43 ANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITE-DIFLSICRGYGRVHRP 101
N F H S +IS + + QF + LL + + + T+ ++ I Y +
Sbjct: 52 GNLFSHAQSLLLQVISGKIHS-QFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSL 110
Query: 102 LDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVL 161
++ F++M + G P + +L +V + + F+ + + V S +L
Sbjct: 111 NLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLD-VYSFGIL 169
Query: 162 IKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKA 221
IK C+ +G ++ +F + E+ G +P+ Y TLI+G C+ G+I +AK+LF EM
Sbjct: 170 IKGCCE-AGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228
Query: 222 CSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAM 281
TYT LINGL ++ ++ ++E+M+ GV PN++TY+ +M+ LCK G + A
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288
Query: 282 ELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCF 341
++ M + NIVTY+TL+ GLC+E KL EA +++D+MK G+ P+ Y +I F
Sbjct: 289 QVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348
Query: 342 CDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLC-KTDPNRAFQVYLSMRN 400
C +GK +A + ++ G++P+ +T+ N +V G C K D + A ++ M
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTY-------NILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 401 RSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQ 460
R I +TY+ LI F + ++ K+ ++ + G +PD T+S ++ + +M +
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 461 AAELLLLELMNKCVEAEV 478
A+ L + C EV
Sbjct: 462 ASRLFKSMVEKNCEPNEV 479
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 209/407 (51%), Gaps = 9/407 (2%)
Query: 49 DNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVF 108
D +F ++I A + + DLL + + I+ ++ G + A +F
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 109 DKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKN 168
+M + G ++Y ++ L + K F Y M+E G+ P + + N ++ LCK+
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 169 SGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVT 228
T DA F++F EM RG + + TY TLI GLCR K+ EA ++ +M++ +P ++T
Sbjct: 282 GRTKDA-FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLIT 340
Query: 229 YTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMI 288
Y +LI+G C + +A+ L +++S+G+ P++ TY+ L+ G C+ G +S A ++++ M
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 289 SKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQ 348
+ +P+ VTY+ L++ + +++A+++ M+ GL PD Y +I FC G+
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 349 EAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPN-RAFQVYLSMRNRSISVDS 407
EA+ MV PN + I+NT++ G CK + RA ++ M + ++ +
Sbjct: 461 EASRLFKSMVEKNCEPNEV-------IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNV 513
Query: 408 LTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWD 454
+Y +I CK+ ++ R+V++++ G P S + A D
Sbjct: 514 ASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAKND 560
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 169/367 (46%), Gaps = 34/367 (9%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
GF + ++ +I + A+DL + K E + + G +
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQG 252
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+++KM+E G P +Y V+ L ++ + K AF+ + MRE G+ + + N LI
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGG 312
Query: 165 LCK----------------------------------NSGTMDAAFKIFREMPNRGCTPD 190
LC+ G + A + R++ +RG +P
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 191 SYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFE 250
TY L++G CR G A ++ KEME + P+ VTYT LI+ +S ++E+A++L
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432
Query: 251 EMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEG 310
M G+ P+V TYS L+ G C G ++A L + M+ K PN V Y+T++ G CKEG
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 311 KLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWS 370
A+++L M+ + L P+ Y +I C K +EA +++M+ GI P+ S
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILS 552
Query: 371 LHIRIHN 377
L R N
Sbjct: 553 LISRAKN 559
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 194/378 (51%), Gaps = 12/378 (3%)
Query: 104 AMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIK 163
A+ V KM + G EP + ++L ++ A M E+G +P + LI
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 164 ALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACS 223
L ++ +A + +M RGC PD TYGT++NGLC+ G I A L +ME
Sbjct: 197 GLFLHNKASEAV-ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIK 255
Query: 224 PTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMEL 283
VV + ++I+ LC+ + VE A+ LF EM +KG+ PNV TY+SL++ LC G S A L
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 284 LQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCD 343
L M+ K+ PN+VT++ L++ KEGKL EA ++ + M + + PD Y +I+ FC
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 344 IGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRAFQVYLSMRNRS 402
+ EA MV PN I+ +NT++ G CK +++ M R
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPN-------IQTYNTLINGFCKCKRVEDGVELFREMSQRG 428
Query: 403 ISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAA 462
+ +++TY+++I F + GD + + ++V + D T+S ++ L K+ A
Sbjct: 429 LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA- 487
Query: 463 ELLLLELMNKCVEAEVDI 480
L++ + + K E E++I
Sbjct: 488 -LVIFKYLQKS-EMELNI 503
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 223/455 (49%), Gaps = 35/455 (7%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G+ D T S +++ + + A L+D++ + F ++ G ++ +A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ + D+M + GC+P +Y TV+ L + + LA M I+ V N +I +
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 267
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
LCK ++ A +F EM +G P+ TY +LIN LC G+ +A L M K +P
Sbjct: 268 LCKYR-HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL 284
VVT+ +LI+ + + EA +L EEM + ++P+ TY+ L++G C +A ++
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 285 QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDI 344
+ M+SK PNI TY+TL+NG CK ++++ VE+ M +GL + Y II F
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Query: 345 GKYQEAANFLDEMVLGGITPNRLTWS----------------------------LHIRIH 376
G A +MV + + +T+S L+I I+
Sbjct: 447 GDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIY 506
Query: 377 NTVVQGLCKTDP-NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVL 435
NT+++G+CK A+ ++ S+ SI D +TY+++I+ C K + ++ + ++
Sbjct: 507 NTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Query: 436 DGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELM 470
DG LP+ GT++ ++ A + R +AA L++ M
Sbjct: 564 DGTLPNSGTYNTLIRA--NLRDCDRAASAELIKEM 596
Score = 185 bits (469), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 201/413 (48%), Gaps = 12/413 (2%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G + D T+ +++ L A +LL+++ + IF +I + A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ +F +M+ G P +Y +++ L + A R +M E I P V + N LI A
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA 337
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
K G + A K+ EM R PD+ TY LING C ++ EAK++FK M +K C P
Sbjct: 338 FFK-EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLP 396
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL 284
+ TY +LING C+ K VE+ + LF EM +G+ N TY++++ G + G A +
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 285 QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDI 344
+ M+S R +I+TYS LL+GLC GKL A+ I ++ ++ + +Y +I C
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA 516
Query: 345 GKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLC-KTDPNRAFQVYLSMRNRSI 403
GK EA + + I P+ +T+ NT++ GLC K A ++ M+
Sbjct: 517 GKVGEAWDLFCSL---SIKPDVVTY-------NTMISGLCSKRLLQEADDLFRKMKEDGT 566
Query: 404 SVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRR 456
+S TY++LI + D SA ++ E+ G + D T S V L D R
Sbjct: 567 LPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGR 619
Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 187/364 (51%), Gaps = 9/364 (2%)
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
DA+ +F M + P+ + +L+ + + N+ +L M+ +GI + + ++ I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
C+ S + A + +M G PD T +L+NG C +I +A L +M
Sbjct: 126 NCFCRRS-QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME 282
P T+T+LI+GL EA+ L ++M +G +P++ TY ++++GLCK G A+
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 283 LLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFC 342
LL M + R + N+V ++T+++ LCK ++ AV++ M+ +G++P+ Y +I+C C
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 343 DIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNR 401
+ G++ +A+ L M+ I PN +T+ N ++ K A +++ M R
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTF-------NALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 402 SISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQA 461
SI D++TY+ LI FC + ++ ++ +V CLP+ T++ ++ +++
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 462 AELL 465
EL
Sbjct: 418 VELF 421
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 172/339 (50%), Gaps = 4/339 (1%)
Query: 33 VIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSIC 92
V D T G R + T++ +I+ L + ++ A LL + ++K + F ++
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335
Query: 93 RGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQ 152
+ + + ++A ++ ++M + +P +Y ++ N+L A + ++ M
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Query: 153 PCVASLNVLIKALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKE 212
P + + N LI CK D ++FREM RG ++ TY T+I G + G A+
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGV-ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454
Query: 213 LFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLC 272
+FK+M + ++TY+ L++GLC ++ A+ +F+ ++ +E N+F Y+++++G+C
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514
Query: 273 KGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAG 332
K G +A +L S +P++VTY+T+++GLC + LQEA ++ +MK G P++G
Sbjct: 515 KAGKVGEAWDLF---CSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSG 571
Query: 333 LYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSL 371
Y +I +A + EM G + T SL
Sbjct: 572 TYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISL 610
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 148/294 (50%), Gaps = 8/294 (2%)
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTS 231
+D A +F +M P + L++ + ++ K L ++M+T S + TY+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 232 LINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKR 291
IN C+ + A+ + +M G EP++ T SSL++G C S A+ L+ M+
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 292 HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
++P+ T++TL++GL K EAV ++D+M +G +PD YG +++ C G A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 352 NFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCK-TDPNRAFQVYLSMRNRSISVDSLTY 410
N L++M I N + I NT++ LCK A ++ M + I + +TY
Sbjct: 244 NLLNKMEAARIKAN-------VVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 411 SSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAEL 464
+SLI C C G ++R++ ++ P+ T++A++ A + K+ +A +L
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 108/268 (40%), Gaps = 33/268 (12%)
Query: 49 DNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVF 108
D T++L+I+ N+ A+ + + + C + ++ G+ + R D + +F
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 109 DKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKN 168
+M + G +Y T++ + A ++ M + + + ++L+ LC +
Sbjct: 422 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC-S 480
Query: 169 SGTMDAAFKIFR----------------------------EMPNRGCT----PDSYTYGT 196
G +D A IF+ E + C+ PD TY T
Sbjct: 481 YGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNT 540
Query: 197 LINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKG 256
+I+GLC + EA +LF++M+ P TY +LI + + L +EMRS G
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600
Query: 257 VEPNVFTYSSLMDGLCKGGCSSQAMELL 284
+ T S + + L G + +L
Sbjct: 601 FVGDASTISLVTNMLHDGRLDKSFLNML 628
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 185/353 (52%), Gaps = 9/353 (2%)
Query: 110 KMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNS 169
KM + G EP + ++L N++ A M E+G +P + LI L ++
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 170 GTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTY 229
+A I R M RGC PD TYG ++NGLC+ G A L +ME VV Y
Sbjct: 198 KASEAVALIDR-MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 256
Query: 230 TSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMIS 289
+++I+ LC+ + ++A+ LF EM +KGV PNV TYSSL+ LC G S A LL MI
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 290 KRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQE 349
++ PN+VT+S L++ K+GKL +A ++ + M + + P+ Y +I+ FC + + E
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 350 AANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRAFQVYLSMRNRSISVDSL 408
A L+ M+ PN +T+ NT++ G CK ++ +++ M R + +++
Sbjct: 377 AKQMLELMIRKDCLPNVVTY-------NTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 409 TYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQA 461
TY++LI F + D + + ++V G P+ T++ ++ L K+ +A
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 482
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 192/378 (50%), Gaps = 9/378 (2%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G+ D T + +++ N+ A L+D++ + F ++ G ++ +A
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ + D+M + GC+P +Y V+ L + LA M I+ V + +I +
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
LCK D A +F EM N+G P+ TY +LI+ LC G+ +A L +M + +P
Sbjct: 263 LCKYRHE-DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINP 321
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL 284
+VT+++LI+ + + +A +L+EEM + ++PN+FTYSSL++G C +A ++L
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 285 QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDI 344
++MI K PN+VTY+TL+NG CK ++ + +E+ M +GL + Y +I F
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441
Query: 345 GKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP-NRAFQVYLSMRNRSI 403
A +MV G+ PN LT+ N ++ GLCK +A V+ ++ ++
Sbjct: 442 RDCDNAQMVFKQMVSVGVHPNILTY-------NILLDGLCKNGKLAKAMVVFEYLQRSTM 494
Query: 404 SVDSLTYSSLITCFCKKG 421
D TY+ +I CK G
Sbjct: 495 EPDIYTYNIMIEGMCKAG 512
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 190/363 (52%), Gaps = 7/363 (1%)
Query: 103 DAMRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLI 162
DA+ +F M + P+ + +L+ + + N+ L F M +GI + + N+LI
Sbjct: 61 DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120
Query: 163 KALCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKAC 222
C+ + A + +M G PD T +L+NG C +I +A L +M
Sbjct: 121 NCFCR-CSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 223 SPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAME 282
P VT+T+LI+GL EA+ L + M +G +P++ TY ++++GLCK G + A+
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 283 LLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFC 342
LL M + + N+V YST+++ LCK +A+ + M+ +G++P+ Y +ISC C
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 343 DIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDPNRAFQVYLSMRNRS 402
+ G++ +A+ L +M+ I PN +T+S I + V+ K +A ++Y M RS
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALI---DAFVK---KGKLVKAEKLYEEMIKRS 353
Query: 403 ISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAA 462
I + TYSSLI FC + ++ ++++ ++ CLP+ T++ ++ +++ +
Sbjct: 354 IDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGM 413
Query: 463 ELL 465
EL
Sbjct: 414 ELF 416
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 162/304 (53%), Gaps = 1/304 (0%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G + D T+ +++ L A +LL+++ K + I+ ++ + DA
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ +F +M+ G P +Y ++++ L + A R M E I P + + + LI A
Sbjct: 273 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 332
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
K G + A K++ EM R P+ +TY +LING C L ++ EAK++ + M K C P
Sbjct: 333 FVK-KGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLP 391
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELL 284
VVTY +LING C++K V++ M LF EM +G+ N TY++L+ G + A +
Sbjct: 392 NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 451
Query: 285 QMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDI 344
+ M+S PNI+TY+ LL+GLCK GKL +A+ + + ++ ++PD Y +I C
Sbjct: 452 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 511
Query: 345 GKYQ 348
GK++
Sbjct: 512 GKWK 515
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 159/308 (51%), Gaps = 9/308 (2%)
Query: 172 MDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTS 231
+D A +F M P + L++ + ++ K ++ME S + TY
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 232 LINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKR 291
LIN C+ + A+ L +M G EP++ T +SL++G C G S A+ L+ M+
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 292 HRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAA 351
++P+ VT++TL++GL K EAV ++DRM +G +PD YG +++ C G A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 352 NFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKT-DPNRAFQVYLSMRNRSISVDSLTY 410
N L++M I N + I++TV+ LCK + A ++ M N+ + + +TY
Sbjct: 239 NLLNKMEAAKIEAN-------VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 291
Query: 411 SSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELM 470
SSLI+C C G ++R++ +++ P+ T+SA++ A + K+ + AE L E++
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVK-AEKLYEEMI 350
Query: 471 NKCVEAEV 478
+ ++ +
Sbjct: 351 KRSIDPNI 358
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 178/360 (49%), Gaps = 15/360 (4%)
Query: 119 TPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKI 178
T Y VL + + +L A + M + P + + L+ A+ K + D
Sbjct: 42 TSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMN-KFDLVISF 100
Query: 179 FREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYTSLINGLCQ 238
+M G + + YTY LIN CR ++ A L +M P +VT SL+NG C
Sbjct: 101 GEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCH 160
Query: 239 SKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVT 298
+ +A+ L ++M G +P+ T+++L+ GL +S+A+ L+ M+ + +P++VT
Sbjct: 161 GNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVT 220
Query: 299 YSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMV 358
Y ++NGLCK G A+ +L++M+ ++ + +Y +I C +A N EM
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280
Query: 359 LGGITPNRLTWSLHIRIHNTVVQGLCK----TDPNRAFQVYLSMRNRSISVDSLTYSSLI 414
G+ PN +T+S +++ LC +D +R M R I+ + +T+S+LI
Sbjct: 281 NKGVRPNVITYS-------SLISCLCNYGRWSDASRLLS---DMIERKINPNLVTFSALI 330
Query: 415 TCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELLLLELMNKCV 474
F KKG + K+ ++ +E++ P+ T+S+++ ++ +A ++L L + C+
Sbjct: 331 DAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL 390
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 213/427 (49%), Gaps = 26/427 (6%)
Query: 53 FSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLS--ICRGYGRVHRPLDAMRVFDK 110
FS ++SK+ + + L + E C I D++ + R R + A+ V K
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHM--EVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGK 129
Query: 111 MKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSG 170
M +FG EP + +++ + N++ A M E+G +P V N +I CK G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK-IG 188
Query: 171 TMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTVVTYT 230
++ A ++F M G D+ TY +L+ GLC G+ +A L ++M + P V+T+T
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 231 SLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQMMISK 290
++I+ + EAM+L+EEM + V+P+VFTY+SL++GLC G +A ++L +M++K
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 291 RHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEA 350
P++VTY+TL+NG CK ++ E ++ M +GL D Y II + G+ A
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 351 ANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKT-DPNRAFQVYLSMRNRSISVDSLT 409
M PN IR ++ ++ GLC +A ++ +M+ I +D T
Sbjct: 369 QEIFSRM---DSRPN-------IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITT 418
Query: 410 YSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTAL-----WDR-----RKMR 459
Y+ +I CK G++ + + L G PD +++ +++ WD+ RKM+
Sbjct: 419 YNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQ 478
Query: 460 QAAELLL 466
+ L L
Sbjct: 479 EDGLLPL 485
Score = 172 bits (435), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 194/380 (51%), Gaps = 15/380 (3%)
Query: 107 VFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALC 166
+F KM + P+ + VL+ + + L + HM GI + S N++I LC
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 167 KNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSPTV 226
+ S + A + +M G PD T +LING C+ ++++A +L +ME P V
Sbjct: 116 RCSRFV-IALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 227 VTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDGLCKGGCSSQAMELLQM 286
V Y ++I+G C+ V +A+ LF+ M GV + TY+SL+ GLC G S A L++
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 287 MISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGK 346
M+ + PN++T++ +++ KEGK EA+++ + M + + PD Y +I+ C G+
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 347 YQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTD-PNRAFQVYLSMRNRSISV 405
EA LD MV G P+ +T +NT++ G CK+ + +++ M R +
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVT-------YNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Query: 406 DSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSAVMTALWDRRKMRQAAELL 465
D++TY+++I + + G + I + P+ T+S ++ L ++ +A L+
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKA--LV 402
Query: 466 LLELMNKCVEAEVDIQNQDV 485
L E M K E E+DI ++
Sbjct: 403 LFENMQKS-EIELDITTYNI 421
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 168/352 (47%), Gaps = 33/352 (9%)
Query: 45 GFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDA 104
G+ D T S +I+ N+ A DL+ ++ + I+ +I G ++ DA
Sbjct: 134 GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDA 193
Query: 105 MRVFDKMKEFGCEPTPKSYITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKA 164
+ +FD+M+ G +Y +++A L + A R R M I P V + +I
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 165 LCKNSGTMDAAFKIFREMPNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKACSP 224
K G A K++ EM R PD +TY +LINGLC G++ EAK++ M TK C P
Sbjct: 254 FVK-EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 225 TVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGV--------------------------- 257
VVTY +LING C+SK V+E +LF EM +G+
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 258 -----EPNVFTYSSLMDGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKL 312
PN+ TYS L+ GLC +A+ L + M +I TY+ +++G+CK G +
Sbjct: 373 SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432
Query: 313 QEAVEILDRMKLQGLKPDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITP 364
++A ++ + +GLKPD Y +IS FC ++ ++ +M G+ P
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 160/359 (44%), Gaps = 33/359 (9%)
Query: 3 VKTMFKWSTKITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVS 62
V M K+ + V LI N+ D + GFR D ++ +I
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 63 ANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKS 122
A +L DR+ ++ + S+ G R DA R+ M P +
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 123 YITVLAILVEENQLKLAFRFYRHMREIGIQPCVASLNVLIKALCKNSGTMDAAFKIFREM 182
+ V+ + V+E + A + Y M + P V + N LI LC + G +D A ++ M
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH-GRVDEAKQMLDLM 305
Query: 183 PNRGCTPDSYTYGTLINGLCRLGKIYEAKELFKEMETKA--------------------- 221
+GC PD TY TLING C+ ++ E +LF+EM +
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 222 -----------CSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLMDG 270
P + TY+ L+ GLC + VE+A+ LFE M+ +E ++ TY+ ++ G
Sbjct: 366 DAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG 425
Query: 271 LCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLKP 329
+CK G A +L + + K +P++V+Y+T+++G C++ + ++ + +M+ GL P
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 145/267 (54%), Gaps = 8/267 (2%)
Query: 209 EAKELFKEMETKACSPTVVTYTSLINGLCQSKSVEEAMRLFEEMRSKGVEPNVFTYSSLM 268
E +LF +M P++V ++ +++ + +SK+ + + LF M G+ ++++Y+ ++
Sbjct: 52 EEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVI 111
Query: 269 DGLCKGGCSSQAMELLQMMISKRHRPNIVTYSTLLNGLCKEGKLQEAVEILDRMKLQGLK 328
+ LC+ A+ ++ M+ + P++VT S+L+NG C+ ++ +A++++ +M+ G +
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR 171
Query: 329 PDAGLYGKIISCFCDIGKYQEAANFLDEMVLGGITPNRLTWSLHIRIHNTVVQGLCKTDP 388
PD +Y II C IG +A D M G+ + +T +N++V GLC +
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVT-------YNSLVAGLCCSGR 224
Query: 389 -NRAFQVYLSMRNRSISVDSLTYSSLITCFCKKGDIHKSARIVDELVLDGCLPDEGTWSA 447
+ A ++ M R I + +T++++I F K+G ++ ++ +E+ PD T+++
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 448 VMTALWDRRKMRQAAELLLLELMNKCV 474
++ L ++ +A ++L L + C+
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCL 311
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 166,343,031
Number of Sequences: 539616
Number of extensions: 6503028
Number of successful extensions: 25937
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 15483
Number of HSP's gapped (non-prelim): 2867
length of query: 485
length of database: 191,569,459
effective HSP length: 121
effective length of query: 364
effective length of database: 126,275,923
effective search space: 45964435972
effective search space used: 45964435972
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)