BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011464
(485 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3OND|A Chain A, Crystal Structure Of Lupinus Luteus
S-Adenosyl-L-Homocysteine Hydrolase In Complex With
Adenosine
pdb|3OND|B Chain B, Crystal Structure Of Lupinus Luteus
S-Adenosyl-L-Homocysteine Hydrolase In Complex With
Adenosine
pdb|3ONE|A Chain A, Crystal Structure Of Lupinus Luteus
S-Adenosyl-L-Homocysteine Hydrolase In Complex With
Adenine
pdb|3ONE|B Chain B, Crystal Structure Of Lupinus Luteus
S-Adenosyl-L-Homocysteine Hydrolase In Complex With
Adenine
pdb|3ONF|A Chain A, Crystal Structure Of Lupinus Luteus
S-Adenosyl-L-Homocysteine Hydrolase In Complex With
Cordycepin
pdb|3ONF|B Chain B, Crystal Structure Of Lupinus Luteus
S-Adenosyl-L-Homocysteine Hydrolase In Complex With
Cordycepin
Length = 488
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/485 (86%), Positives = 445/485 (91%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MAL VEK+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMA R+EFGPSQPFKGAKITGS
Sbjct: 4 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMASRSEFGPSQPFKGAKITGS 63
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH WKGETLQEYWWC
Sbjct: 64 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 123
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGPGGGPDLIVDDGGD TLLIHEGVKAEEIYEK+G+ PDP STDNAEF+IVL+I
Sbjct: 124 TERALDWGPGGGPDLIVDDGGDTTLLIHEGVKAEEIYEKSGQFPDPDSTDNAEFKIVLSI 183
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
I++GLK DPK+YHKMK+R+VGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDN
Sbjct: 184 IKEGLKTDPKRYHKMKDRVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDN 243
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVAVV GYGDVGKGCAAALKQAGARVIVTEIDPICALQ
Sbjct: 244 LYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 303
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
A MEGLQVLTLEDV+S+ADIFVTTTGNKDIIM+DHMKKMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 304 ATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHFDNEIDMLGL 363
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
ET+PGVKRITIKPQTDRWVFPETN+GII+LAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 364 ETHPGVKRITIKPQTDRWVFPETNTGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 423
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKP 480
LELW EKS+GKYEKKVYVLPKHLDEKV T+L+K+QADYISV +GPYKP
Sbjct: 424 LELWNEKSSGKYEKKVYVLPKHLDEKVAALHLEKLGAKLTKLSKDQADYISVPVEGPYKP 483
Query: 481 LHYRY 485
HYRY
Sbjct: 484 FHYRY 488
>pdb|1V8B|A Chain A, Crystal Structure Of A Hydrolase
pdb|1V8B|B Chain B, Crystal Structure Of A Hydrolase
pdb|1V8B|C Chain C, Crystal Structure Of A Hydrolase
pdb|1V8B|D Chain D, Crystal Structure Of A Hydrolase
Length = 479
Score = 573 bits (1476), Expect = e-163, Method: Compositional matrix adjust.
Identities = 268/474 (56%), Positives = 343/474 (72%), Gaps = 4/474 (0%)
Query: 15 KVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETL 74
KVKD+S A FG++++E++E EMPGLM R E+G QP K AKITG LHMT++ A+LIETL
Sbjct: 7 KVKDISLAPFGKMQMEISENEMPGLMRIREEYGKDQPLKNAKITGCLHMTVECALLIETL 66
Query: 75 TALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXX-XWKGETLQEYWWCTEKALDWGPG--G 131
LGA++RWCSCNI+ST D+ WK ETL+EYWWC E AL WG G
Sbjct: 67 QKLGAQIRWCSCNIYSTADYAAAAVSTLENVTVFAWKNETLEEYWWCVESALTWGDGDDN 126
Query: 132 GPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKK 191
GPD+IVDDGGDATLL+H+GV+ E++YE+ LPDP N E + LT++++ + +PKK
Sbjct: 127 GPDMIVDDGGDATLLVHKGVEYEKLYEEKNILPDPEKAKNEEERCFLTLLKNSILKNPKK 186
Query: 192 YHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDG 251
+ + ++++GVSEETTTGV RL +M + LLF AINVND+VTK K+DN+YGCRHSLPDG
Sbjct: 187 WTNIAKKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQKYDNVYGCRHSLPDG 246
Query: 252 LMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTL 311
LMRATD +I+GK+ V+CGYGDVGKGCA+++K GARV +TEIDPICA+QA+MEG V+TL
Sbjct: 247 LMRATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTL 306
Query: 312 EDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITI 371
++++ D F+T TGN D+I ++H+ KMKNNA+V NIGHFD+EI + L Y G+ +
Sbjct: 307 DEIVDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENV 366
Query: 372 KPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGK 431
KPQ DR P N IIVLA GRL+NLGCATGHP+FVMS SF NQ AQL+LW+ K T K
Sbjct: 367 KPQVDRITLPNGNK-IIVLARGRLLNLGCATGHPAFVMSFSFCNQTFAQLDLWQNKDTNK 425
Query: 432 YEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 485
YE KVY+LPKHLDEKV T L Q ++ V+ GP+K YRY
Sbjct: 426 YENKVYLLPKHLDEKVALYHLKKLNASLTELDDNQCQFLGVNKSGPFKSNEYRY 479
>pdb|3CE6|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And Adenosine
pdb|3CE6|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And Adenosine
pdb|3CE6|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And Adenosine
pdb|3CE6|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And Adenosine
Length = 494
Score = 569 bits (1466), Expect = e-162, Method: Compositional matrix adjust.
Identities = 284/486 (58%), Positives = 344/486 (70%), Gaps = 17/486 (3%)
Query: 10 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAV 69
+G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+ QP KGA+I+GSLHMT+QTAV
Sbjct: 16 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAV 75
Query: 70 LIETLTALGAEVRWCSCNIFSTQDHXXXXXXX---------XXXXXXXWKGETLQEYWWC 120
LIETLTALGAEVRW SCNIFSTQDH WKGETL+EYWW
Sbjct: 76 LIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPDEPKGVPVFAWKGETLEEYWWA 135
Query: 121 TEKALDW-GPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLT 179
E+ L W P ++I+DDGGDAT+L+ G++ YEK G +P D AE+++ L
Sbjct: 136 AEQMLTWPDPDKPANMILDDGGDATMLVLRGMQ----YEKAGVVPPAEEDDPAEWKVFLN 191
Query: 180 IIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFD 239
++R + D K+ K+ E + GV+EETTTGV RLYQ G L FPAINVNDSVTKSKFD
Sbjct: 192 LLRTRFETDKDKWTKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSVTKSKFD 251
Query: 240 NLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICAL 299
N YG RHSL DG+ R TD +I GK ++CGYGDVGKGCA A+K GARV VTEIDPI AL
Sbjct: 252 NKYGTRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINAL 311
Query: 300 QALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLG 359
QA+MEG V+T+E+ + DADI VT TGNKDIIM++H+K MK++AI+ NIGHFDNEIDM G
Sbjct: 312 QAMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAG 371
Query: 360 LETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIA 419
LE G R+ +KPQ D W F +T IIVL+EGRL+NLG ATGHPSFVMS SF NQ IA
Sbjct: 372 LER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIA 430
Query: 420 QLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYK 479
Q+ELW + +Y+ +VY LPKHLDEKV T+LTKEQA+Y+ V +GPYK
Sbjct: 431 QIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYK 488
Query: 480 PLHYRY 485
P HYRY
Sbjct: 489 PDHYRY 494
>pdb|3DHY|A Chain A, Crystal Structures Of Mycobacterium Tuberculosis
S-Adenosyl- Homocysteine Hydrolase In Ternary Complex
With Substrate An Inhibitors
pdb|3DHY|B Chain B, Crystal Structures Of Mycobacterium Tuberculosis
S-Adenosyl- Homocysteine Hydrolase In Ternary Complex
With Substrate An Inhibitors
pdb|3DHY|C Chain C, Crystal Structures Of Mycobacterium Tuberculosis
S-Adenosyl- Homocysteine Hydrolase In Ternary Complex
With Substrate An Inhibitors
pdb|3DHY|D Chain D, Crystal Structures Of Mycobacterium Tuberculosis
S-Adenosyl- Homocysteine Hydrolase In Ternary Complex
With Substrate An Inhibitors
pdb|2ZIZ|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
S-adenosyl-l- Homocysteine Hydrolase In Ternary Complex
With Nad And 3- Deazaadenosine
pdb|2ZIZ|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
S-adenosyl-l- Homocysteine Hydrolase In Ternary Complex
With Nad And 3- Deazaadenosine
pdb|2ZIZ|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis
S-adenosyl-l- Homocysteine Hydrolase In Ternary Complex
With Nad And 3- Deazaadenosine
pdb|2ZIZ|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis
S-adenosyl-l- Homocysteine Hydrolase In Ternary Complex
With Nad And 3- Deazaadenosine
pdb|2ZJ0|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And 2- Fluoroadenosine
pdb|2ZJ0|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And 2- Fluoroadenosine
pdb|2ZJ0|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And 2- Fluoroadenosine
pdb|2ZJ0|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And 2- Fluoroadenosine
pdb|2ZJ1|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And 3'-Keto- Aristeromycin
pdb|2ZJ1|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And 3'-Keto- Aristeromycin
pdb|2ZJ1|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And 3'-Keto- Aristeromycin
pdb|2ZJ1|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And 3'-Keto- Aristeromycin
Length = 495
Score = 569 bits (1466), Expect = e-162, Method: Compositional matrix adjust.
Identities = 284/486 (58%), Positives = 344/486 (70%), Gaps = 17/486 (3%)
Query: 10 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAV 69
+G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+ QP KGA+I+GSLHMT+QTAV
Sbjct: 17 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAV 76
Query: 70 LIETLTALGAEVRWCSCNIFSTQDHXXXXXXX---------XXXXXXXWKGETLQEYWWC 120
LIETLTALGAEVRW SCNIFSTQDH WKGETL+EYWW
Sbjct: 77 LIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPDEPKGVPVFAWKGETLEEYWWA 136
Query: 121 TEKALDW-GPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLT 179
E+ L W P ++I+DDGGDAT+L+ G++ YEK G +P D AE+++ L
Sbjct: 137 AEQMLTWPDPDKPANMILDDGGDATMLVLRGMQ----YEKAGVVPPAEEDDPAEWKVFLN 192
Query: 180 IIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFD 239
++R + D K+ K+ E + GV+EETTTGV RLYQ G L FPAINVNDSVTKSKFD
Sbjct: 193 LLRTRFETDKDKWTKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSVTKSKFD 252
Query: 240 NLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICAL 299
N YG RHSL DG+ R TD +I GK ++CGYGDVGKGCA A+K GARV VTEIDPI AL
Sbjct: 253 NKYGTRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINAL 312
Query: 300 QALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLG 359
QA+MEG V+T+E+ + DADI VT TGNKDIIM++H+K MK++AI+ NIGHFDNEIDM G
Sbjct: 313 QAMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAG 372
Query: 360 LETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIA 419
LE G R+ +KPQ D W F +T IIVL+EGRL+NLG ATGHPSFVMS SF NQ IA
Sbjct: 373 LER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIA 431
Query: 420 QLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYK 479
Q+ELW + +Y+ +VY LPKHLDEKV T+LTKEQA+Y+ V +GPYK
Sbjct: 432 QIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYK 489
Query: 480 PLHYRY 485
P HYRY
Sbjct: 490 PDHYRY 495
>pdb|3N58|A Chain A, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Brucella Melitensis In Ternary Complex With Nad And
Adenosine, Orthorhombic Form
pdb|3N58|B Chain B, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Brucella Melitensis In Ternary Complex With Nad And
Adenosine, Orthorhombic Form
pdb|3N58|C Chain C, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Brucella Melitensis In Ternary Complex With Nad And
Adenosine, Orthorhombic Form
pdb|3N58|D Chain D, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Brucella Melitensis In Ternary Complex With Nad And
Adenosine, Orthorhombic Form
Length = 464
Score = 527 bits (1358), Expect = e-150, Method: Compositional matrix adjust.
Identities = 273/470 (58%), Positives = 331/470 (70%), Gaps = 12/470 (2%)
Query: 16 VKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLT 75
VKD+S AD+GR E+++AE EMPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL
Sbjct: 7 VKDISLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLK 66
Query: 76 ALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDL 135
LGAEVRW SCNIFSTQDH KGETL+EYW T++ W G ++
Sbjct: 67 VLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQWPDGEPSNM 126
Query: 136 IVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKM 195
I+DDGGDAT+ I G +AE + L +P S E +++ I+ + A P + K
Sbjct: 127 ILDDGGDATMYILIGARAEAGEDV---LSNPQS---EEEEVLFAQIKKRMAATPGFFTKQ 180
Query: 196 KERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRA 255
+ + GV+EETTTGV RLYQ+Q+ G L FPAINVNDSVTKSKFDN YGC+ SL DG+ R
Sbjct: 181 RAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRG 240
Query: 256 TDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVL 315
TDVM+AGKVAVVCGYGDVGKG A +L AGARV VTE+DPICALQA M+G +V+TL+D
Sbjct: 241 TDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAA 300
Query: 316 SDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQT 375
S ADI VTTTGNKD+I +DHM+KMK+ IV NIGHFDNEI + L +K +KPQ
Sbjct: 301 STADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRN---LKWTNVKPQV 357
Query: 376 DRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKK 435
D FP+ +I+L+EGRL+NLG ATGHPSFVMS SFTNQV+ Q+EL+ T Y+ +
Sbjct: 358 DLIEFPDGKR-LILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTR--TDAYKNE 414
Query: 436 VYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 485
VYVLPKHLDEKV T L++EQA YI V+ GP+K HYRY
Sbjct: 415 VYVLPKHLDEKVARLHLDKLGAKLTVLSEEQAAYIGVTPQGPFKSEHYRY 464
>pdb|3D64|A Chain A, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Burkholderia Pseudomallei
pdb|3D64|B Chain B, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Burkholderia Pseudomallei
pdb|3GLQ|A Chain A, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Burkholderia Pseudomallei In Complex With 9-Beta-D-
Arabino-Furansyl-Adenine
pdb|3GLQ|B Chain B, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Burkholderia Pseudomallei In Complex With 9-Beta-D-
Arabino-Furansyl-Adenine
Length = 494
Score = 519 bits (1336), Expect = e-147, Method: Compositional matrix adjust.
Identities = 271/485 (55%), Positives = 330/485 (68%), Gaps = 12/485 (2%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
M +V S S +++ V D++ A +GR E+ +AE EMPGL+ R E+ QP KGA+I GS
Sbjct: 22 MNAAVIDSHSAQDYVVADIALAGWGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGS 81
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWC 120
LHMTIQT VLIETL ALGA+VRW SCNIFSTQDH +KGE+L EYW
Sbjct: 82 LHMTIQTGVLIETLKALGADVRWASCNIFSTQDHAAAAIVEAGTPVFAFKGESLDEYWEF 141
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
+ + +W G ++I+DDGGDATLL+ G KAE+ + T+ E + +I
Sbjct: 142 SHRIFEWPNGEFANMILDDGGDATLLLILGSKAEKDRSVIAR-----PTNEEEVALFKSI 196
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
R L+ D Y K + GV+EETTTGV RLYQM+++G L FPA NVNDSVTKSKFDN
Sbjct: 197 ERH-LEIDGSWYSKRLAHIKGVTEETTTGVHRLYQMEKDGRLPFPAFNVNDSVTKSKFDN 255
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCR SL DG+ RATDVMIAGK+AVV GYGDVGKGCA +L+ GA V VTEIDPICALQ
Sbjct: 256 LYGCRESLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQ 315
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
A MEG +V+T+E ADIFVT TGN +I DHMK M++NAIVCNIGHFD+EID+
Sbjct: 316 AAMEGYRVVTMEYAADKADIFVTATGNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVAST 375
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Y + IKPQ D +FP+ +I+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ
Sbjct: 376 RQY---QWENIKPQVDHIIFPDGKR-VILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQ 431
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKP 480
+EL+ G+Y KVYVLPKHLDEKV + L+ +QA YI VS GP+KP
Sbjct: 432 IELFTRG--GEYANKVYVLPKHLDEKVARLHLARIGAQLSELSDDQAAYIGVSKAGPFKP 489
Query: 481 LHYRY 485
HYRY
Sbjct: 490 DHYRY 494
>pdb|3H9U|A Chain A, S-Adenosyl Homocysteine Hydrolase (Sahh) From Trypanosoma
Brucei
pdb|3H9U|B Chain B, S-Adenosyl Homocysteine Hydrolase (Sahh) From Trypanosoma
Brucei
pdb|3H9U|C Chain C, S-Adenosyl Homocysteine Hydrolase (Sahh) From Trypanosoma
Brucei
pdb|3H9U|D Chain D, S-Adenosyl Homocysteine Hydrolase (Sahh) From Trypanosoma
Brucei
Length = 436
Score = 504 bits (1299), Expect = e-143, Method: Compositional matrix adjust.
Identities = 265/477 (55%), Positives = 318/477 (66%), Gaps = 48/477 (10%)
Query: 14 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIET 73
+KV+D+S A++GR E+ELAE EMPGLM R E+GPS+P KGAKI G LHMT+QTAVLIET
Sbjct: 3 YKVRDISLAEWGRRELELAENEMPGLMELRREYGPSKPLKGAKIAGCLHMTMQTAVLIET 62
Query: 74 LTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGG- 132
L LGAEVRW SCNIFSTQDH WKGET +EY WC ++ L G G
Sbjct: 63 LVELGAEVRWASCNIFSTQDHAAAAIAKRGIPVFAWKGETEEEYMWCMKQTLKGFSGDGY 122
Query: 133 PDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKY 192
P++++DDGGD T + +E E GK+
Sbjct: 123 PNMLLDDGGDLTNYV-----LDECKELDGKI----------------------------- 148
Query: 193 HKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGL 252
GVSEETTTGVK LY+ + G L PA+NVNDSVTKSKFDNLYGCR SL DG+
Sbjct: 149 -------YGVSEETTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGI 201
Query: 253 MRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLE 312
RATDVMIAGK A VCGYGDVGKGCAAAL+ GARV+VTE+DPI ALQA MEG QVL +E
Sbjct: 202 KRATDVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVE 261
Query: 313 DVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIK 372
DV+ +A IFVTTTGN DII +H +M+++AIVCNIGHFD EI + L+ +R+ +K
Sbjct: 262 DVVEEAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKA-NAKERVEVK 320
Query: 373 PQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKY 432
PQ DR+ II+LAEGRL+NLGCA+GHPSFVMS SF NQV+AQ+ELW + TGKY
Sbjct: 321 PQVDRYTMANGRH-IILLAEGRLVNLGCASGHPSFVMSNSFCNQVLAQIELWTNRDTGKY 379
Query: 433 EK----KVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 485
+ +VY LPK LDEKV T+LT +QA+YI+ DGP+KP HYRY
Sbjct: 380 PRGAKAQVYFLPKKLDEKVAALHLGKLGAKLTKLTPKQAEYINCPVDGPFKPDHYRY 436
>pdb|3G1U|A Chain A, Crystal Structure Of Leishmania Major S-
Adenosylhomocysteine Hydrolase
pdb|3G1U|B Chain B, Crystal Structure Of Leishmania Major S-
Adenosylhomocysteine Hydrolase
pdb|3G1U|C Chain C, Crystal Structure Of Leishmania Major S-
Adenosylhomocysteine Hydrolase
pdb|3G1U|D Chain D, Crystal Structure Of Leishmania Major S-
Adenosylhomocysteine Hydrolase
Length = 437
Score = 498 bits (1283), Expect = e-141, Method: Compositional matrix adjust.
Identities = 262/478 (54%), Positives = 315/478 (65%), Gaps = 48/478 (10%)
Query: 13 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIE 72
++KVKD+S A++GR IELAE EMPGLM R E+GPSQP KGAKI G LHMT+QTAVLIE
Sbjct: 3 DYKVKDISLAEWGRKAIELAENEMPGLMELRREYGPSQPLKGAKIAGCLHMTVQTAVLIE 62
Query: 73 TLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGG 132
TL ALGAE+RW SCNIFSTQD+ WKGET +EY WC + + G G
Sbjct: 63 TLKALGAELRWSSCNIFSTQDNAAAAIAKTGVPVFAWKGETDEEYEWCIAQTVKGFSGDG 122
Query: 133 -PDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKK 191
P++I+DDGGD T L+ + +
Sbjct: 123 LPNMILDDGGDLTNLVID-----------------------------------------R 141
Query: 192 YHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDG 251
Y ++ ++ G+SEETTTGVK LY+ G L AINVNDSVTKSKFDNLYGCR SL DG
Sbjct: 142 YPELVPKIFGISEETTTGVKNLYKRLSKGNLPISAINVNDSVTKSKFDNLYGCRESLVDG 201
Query: 252 LMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTL 311
+ RATDVMIAGK VCGYGDVGKGCAAAL+ GARV+VTE+DPI ALQA MEG QV +
Sbjct: 202 IKRATDVMIAGKTCCVCGYGDVGKGCAAALRAFGARVVVTEVDPINALQASMEGYQVALV 261
Query: 312 EDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITI 371
EDV++DA IFVTTTGN DII DH M+++AIVCNIGHFD EI + LE + + I
Sbjct: 262 EDVMADAHIFVTTTGNDDIITSDHFPHMRDDAIVCNIGHFDTEIQVGWLEAN-AKEHVEI 320
Query: 372 KPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGK 431
KPQ DR+ E II+LA+GRL+NLGCA+GHPSFVMS SFTNQV+AQ+ELW + GK
Sbjct: 321 KPQVDRYTM-ENGRHIILLAKGRLVNLGCASGHPSFVMSNSFTNQVLAQIELWSNRDNGK 379
Query: 432 YEK----KVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 485
Y + V+ LPK LDEKV T+LT +QA+YI+ +GP+KP HYRY
Sbjct: 380 YPRGDKAGVFFLPKALDEKVAALHLAHVGAKLTKLTPKQAEYINCPVNGPFKPDHYRY 437
>pdb|1LI4|A Chain A, Human S-Adenosylhomocysteine Hydrolase Complexed With
Neplanocin
Length = 432
Score = 470 bits (1209), Expect = e-133, Method: Compositional matrix adjust.
Identities = 252/472 (53%), Positives = 306/472 (64%), Gaps = 46/472 (9%)
Query: 14 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIET 73
+KV D+ A +GR +++AE EMPGLM R + S+P KGA+I G LHMT++TAVLIET
Sbjct: 7 YKVADIGLAAWGRKALDIAENEMPGLMRMRERYSASKPLKGARIAGCLHMTVETAVLIET 66
Query: 74 LTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 133
L LGAEV+W SCNIFSTQDH WKGET +EY WC E+ L + G
Sbjct: 67 LVTLGAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTL-YFKDGPL 125
Query: 134 DLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYH 193
++I+DDGGD T LIH KY
Sbjct: 126 NMILDDGGDLTNLIH-----------------------------------------TKYP 144
Query: 194 KMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM 253
++ + G+SEETTTGV LY+M NG L PAINVNDSVTKSKFDNLYGCR SL DG+
Sbjct: 145 QLLPGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTKSKFDNLYGCRESLIDGIK 204
Query: 254 RATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLED 313
RATDVMIAGKVAVV GYGDVGKGCA AL+ GARVI+TEIDPI ALQA MEG +V T+++
Sbjct: 205 RATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDE 264
Query: 314 VLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKP 373
+ +IFVTTTG DII+ H ++MK++AIVCNIGHFD EID+ L V+++ IKP
Sbjct: 265 ACQEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNE-NAVEKVNIKP 323
Query: 374 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYE 433
Q DR+ + II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW KY
Sbjct: 324 QVDRYRL-KNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPD--KYP 380
Query: 434 KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 485
V+ LPK LDE V T+LT++QA Y+ +S DGP+KP HYRY
Sbjct: 381 VGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMSCDGPFKPDHYRY 432
>pdb|3NJ4|A Chain A, Fluoro-Neplanocin A In Human S-Adenosylhomocysteine
Hydrolase
pdb|3NJ4|B Chain B, Fluoro-Neplanocin A In Human S-Adenosylhomocysteine
Hydrolase
pdb|3NJ4|C Chain C, Fluoro-Neplanocin A In Human S-Adenosylhomocysteine
Hydrolase
pdb|3NJ4|D Chain D, Fluoro-Neplanocin A In Human S-Adenosylhomocysteine
Hydrolase
Length = 435
Score = 469 bits (1208), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/472 (53%), Positives = 306/472 (64%), Gaps = 46/472 (9%)
Query: 14 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIET 73
+KV D+ A +GR +++AE EMPGLM R + S+P KGA+I G LHMT++TAVLIET
Sbjct: 10 YKVADIGLAAWGRKALDIAENEMPGLMRMRERYSASKPLKGARIAGCLHMTVETAVLIET 69
Query: 74 LTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 133
L LGAEV+W SCNIFSTQDH WKGET +EY WC E+ L + G
Sbjct: 70 LVTLGAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTL-YFKDGPL 128
Query: 134 DLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYH 193
++I+DDGGD T LIH KY
Sbjct: 129 NMILDDGGDLTNLIH-----------------------------------------TKYP 147
Query: 194 KMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM 253
++ + G+SEETTTGV LY+M NG L PAINVNDSVTKSKFDNLYGCR SL DG+
Sbjct: 148 QLLPGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTKSKFDNLYGCRESLIDGIK 207
Query: 254 RATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLED 313
RATDVMIAGKVAVV GYGDVGKGCA AL+ GARVI+TEIDPI ALQA MEG +V T+++
Sbjct: 208 RATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDE 267
Query: 314 VLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKP 373
+ +IFVTTTG DII+ H ++MK++AIVCNIGHFD EID+ L V+++ IKP
Sbjct: 268 ACQEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNE-NAVEKVNIKP 326
Query: 374 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYE 433
Q DR+ + II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW KY
Sbjct: 327 QVDRYRL-KNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPD--KYP 383
Query: 434 KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 485
V+ LPK LDE V T+LT++QA Y+ +S DGP+KP HYRY
Sbjct: 384 VGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMSCDGPFKPDHYRY 435
>pdb|1B3R|A Chain A, Rat Liver S-Adenosylhomocystein Hydrolase
pdb|1B3R|B Chain B, Rat Liver S-Adenosylhomocystein Hydrolase
pdb|1B3R|C Chain C, Rat Liver S-Adenosylhomocystein Hydrolase
pdb|1B3R|D Chain D, Rat Liver S-Adenosylhomocystein Hydrolase
pdb|1K0U|A Chain A, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|B Chain B, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|C Chain C, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|D Chain D, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|E Chain E, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|F Chain F, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|G Chain G, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|H Chain H, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1KY4|A Chain A, S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|1KY4|B Chain B, S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|1KY4|C Chain C, S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|1KY4|D Chain D, S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|2H5L|A Chain A, S-adenosylhomocysteine Hydrolase Containing Nad And
3-deaza- D-eritadenine
pdb|2H5L|B Chain B, S-adenosylhomocysteine Hydrolase Containing Nad And
3-deaza- D-eritadenine
pdb|2H5L|C Chain C, S-adenosylhomocysteine Hydrolase Containing Nad And
3-deaza- D-eritadenine
pdb|2H5L|D Chain D, S-adenosylhomocysteine Hydrolase Containing Nad And
3-deaza- D-eritadenine
pdb|2H5L|E Chain E, S-adenosylhomocysteine Hydrolase Containing Nad And
3-deaza- D-eritadenine
pdb|2H5L|F Chain F, S-adenosylhomocysteine Hydrolase Containing Nad And
3-deaza- D-eritadenine
pdb|2H5L|G Chain G, S-adenosylhomocysteine Hydrolase Containing Nad And
3-deaza- D-eritadenine
pdb|2H5L|H Chain H, S-adenosylhomocysteine Hydrolase Containing Nad And
3-deaza- D-eritadenine
Length = 431
Score = 469 bits (1206), Expect = e-132, Method: Compositional matrix adjust.
Identities = 251/472 (53%), Positives = 307/472 (65%), Gaps = 46/472 (9%)
Query: 14 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIET 73
+KV D+ A +GR +++AE EMPGLM R + S+P KGA+I G LHMT++TAVLIET
Sbjct: 6 YKVADIGLAAWGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIET 65
Query: 74 LTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 133
L ALGAEVRW SCNIFSTQDH WKGET +EY WC E+ L + G
Sbjct: 66 LVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETDEEYLWCIEQTLHF-KDGPL 124
Query: 134 DLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYH 193
++I+DDGGD T LIH K+
Sbjct: 125 NMILDDGGDLTNLIH-----------------------------------------TKHP 143
Query: 194 KMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM 253
++ + G+SEETTTGV LY+M NG L PAINVNDSVTKSKFDNLYGCR SL DG+
Sbjct: 144 QLLSGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTKSKFDNLYGCRESLIDGIK 203
Query: 254 RATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLED 313
RATDVMIAGKVAVV GYGDVGKGCA AL+ GARVI+TEIDPI ALQA MEG +V T+++
Sbjct: 204 RATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDE 263
Query: 314 VLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKP 373
+ +IFVTTTG DII+ H ++MK++AIVCNIGHFD EID+ L V+++ IKP
Sbjct: 264 ACKEGNIFVTTTGCVDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNE-NAVEKVNIKP 322
Query: 374 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYE 433
Q DR++ + II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW KY
Sbjct: 323 QVDRYLLKNGHR-IILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPD--KYP 379
Query: 434 KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 485
V+ LPK LDE V T+LT++QA Y+ + +GP+KP HYRY
Sbjct: 380 VGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMPINGPFKPDHYRY 431
>pdb|1XWF|A Chain A, K185n Mutated S-adenosylhomocysteine Hydrolase
pdb|1XWF|B Chain B, K185n Mutated S-adenosylhomocysteine Hydrolase
pdb|1XWF|C Chain C, K185n Mutated S-adenosylhomocysteine Hydrolase
pdb|1XWF|D Chain D, K185n Mutated S-adenosylhomocysteine Hydrolase
Length = 431
Score = 467 bits (1202), Expect = e-132, Method: Compositional matrix adjust.
Identities = 250/472 (52%), Positives = 306/472 (64%), Gaps = 46/472 (9%)
Query: 14 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIET 73
+KV D+ A +GR +++AE EMPGLM R + S+P KGA+I G LHMT++TAVLIET
Sbjct: 6 YKVADIGLAAWGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIET 65
Query: 74 LTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 133
L ALGAEVRW SCNIFSTQDH WKGET +EY WC E+ L + G
Sbjct: 66 LVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETDEEYLWCIEQTLHF-KDGPL 124
Query: 134 DLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYH 193
++I+DDGGD T LIH K+
Sbjct: 125 NMILDDGGDLTNLIH-----------------------------------------TKHP 143
Query: 194 KMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM 253
++ + G+SEETTTGV LY+M NG L PAINVNDSVT SKFDNLYGCR SL DG+
Sbjct: 144 QLLSGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTNSKFDNLYGCRESLIDGIK 203
Query: 254 RATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLED 313
RATDVMIAGKVAVV GYGDVGKGCA AL+ GARVI+TEIDPI ALQA MEG +V T+++
Sbjct: 204 RATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDE 263
Query: 314 VLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKP 373
+ +IFVTTTG DII+ H ++MK++AIVCNIGHFD EID+ L V+++ IKP
Sbjct: 264 ACKEGNIFVTTTGCVDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNE-NAVEKVNIKP 322
Query: 374 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYE 433
Q DR++ + II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW KY
Sbjct: 323 QVDRYLLKNGHR-IILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPD--KYP 379
Query: 434 KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 485
V+ LPK LDE V T+LT++QA Y+ + +GP+KP HYRY
Sbjct: 380 VGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMPINGPFKPDHYRY 431
>pdb|1D4F|A Chain A, Crystal Structure Of Recombinant Rat-Liver D244e Mutant S-
Adenosylhomocysteine Hydrolase
pdb|1D4F|B Chain B, Crystal Structure Of Recombinant Rat-Liver D244e Mutant S-
Adenosylhomocysteine Hydrolase
pdb|1D4F|C Chain C, Crystal Structure Of Recombinant Rat-Liver D244e Mutant S-
Adenosylhomocysteine Hydrolase
pdb|1D4F|D Chain D, Crystal Structure Of Recombinant Rat-Liver D244e Mutant S-
Adenosylhomocysteine Hydrolase
pdb|1KY5|A Chain A, D244e Mutant S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|1KY5|B Chain B, D244e Mutant S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|1KY5|C Chain C, D244e Mutant S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|1KY5|D Chain D, D244e Mutant S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
Length = 431
Score = 467 bits (1201), Expect = e-132, Method: Compositional matrix adjust.
Identities = 250/472 (52%), Positives = 307/472 (65%), Gaps = 46/472 (9%)
Query: 14 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIET 73
+KV D+ A +GR +++AE EMPGLM R + S+P KGA+I G LHMT++TAVLIET
Sbjct: 6 YKVADIGLAAWGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIET 65
Query: 74 LTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 133
L ALGAEVRW SCNIFSTQDH WKGET +EY WC E+ L + G
Sbjct: 66 LVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETDEEYLWCIEQTLHF-KDGPL 124
Query: 134 DLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYH 193
++I+DDGGD T LIH K+
Sbjct: 125 NMILDDGGDLTNLIH-----------------------------------------TKHP 143
Query: 194 KMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM 253
++ + G+SEETTTGV LY+M NG L PAINVNDSVTKSKFDNLYGCR SL DG+
Sbjct: 144 QLLSGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTKSKFDNLYGCRESLIDGIK 203
Query: 254 RATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLED 313
RATDVMIAGKVAVV GYGDVGKGCA AL+ GARVI+TEI+PI ALQA MEG +V T+++
Sbjct: 204 RATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIEPINALQAAMEGYEVTTMDE 263
Query: 314 VLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKP 373
+ +IFVTTTG DII+ H ++MK++AIVCNIGHFD EID+ L V+++ IKP
Sbjct: 264 ACKEGNIFVTTTGCVDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNE-NAVEKVNIKP 322
Query: 374 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYE 433
Q DR++ + II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW KY
Sbjct: 323 QVDRYLLKNGHR-IILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPD--KYP 379
Query: 434 KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 485
V+ LPK LDE V T+LT++QA Y+ + +GP+KP HYRY
Sbjct: 380 VGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMPINGPFKPDHYRY 431
>pdb|1A7A|A Chain A, Structure Of Human Placental S-adenosylhomocysteine
Hydrolase: Determination Of A 30 Selenium Atom
Substructure From Data At A Single Wavelength
pdb|1A7A|B Chain B, Structure Of Human Placental S-adenosylhomocysteine
Hydrolase: Determination Of A 30 Selenium Atom
Substructure From Data At A Single Wavelength
Length = 432
Score = 443 bits (1140), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/472 (51%), Positives = 294/472 (62%), Gaps = 46/472 (9%)
Query: 14 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIET 73
+KV D+ A +GR +++AE E PGL R + S+P KGA+I G LH T++TAVLIET
Sbjct: 7 YKVADIGLAAWGRKALDIAENEXPGLXRXRERYSASKPLKGARIAGCLHXTVETAVLIET 66
Query: 74 LTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 133
L LGAEV+W SCNIFSTQ+H WKGET +EY WC E+ L + G
Sbjct: 67 LVTLGAEVQWSSCNIFSTQNHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTL-YFKDGPL 125
Query: 134 DLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYH 193
+ I+DDGGD T LIH KY
Sbjct: 126 NXILDDGGDLTNLIH-----------------------------------------TKYP 144
Query: 194 KMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM 253
++ + G+SEETTTGV LY+ NG L PAINVNDSVTKSKFDNLYGCR SL DG+
Sbjct: 145 QLLPGIRGISEETTTGVHNLYKXXANGILKVPAINVNDSVTKSKFDNLYGCRESLIDGIK 204
Query: 254 RATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLED 313
RATDV IAGKVAVV GYGDVGKGCA AL+ GARVI+TEIDPI ALQA EG +V T ++
Sbjct: 205 RATDVXIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAXEGYEVTTXDE 264
Query: 314 VLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKP 373
+ +IFVTTTG DII+ H ++ K++AIVCNIGHFD EID+ L V+++ IKP
Sbjct: 265 ACQEGNIFVTTTGCIDIILGRHFEQXKDDAIVCNIGHFDVEIDVKWLNE-NAVEKVNIKP 323
Query: 374 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYE 433
Q DR+ + II+LAEGRL+NLGCA GHPSFV S SFTNQV AQ+ELW KY
Sbjct: 324 QVDRYRL-KNGRRIILLAEGRLVNLGCAXGHPSFVXSNSFTNQVXAQIELWTHPD--KYP 380
Query: 434 KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 485
V+ LPK LDE V T+LT++QA Y+ S DGP+KP HYRY
Sbjct: 381 VGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGXSCDGPFKPDHYRY 432
>pdb|3GVP|A Chain A, Human Sahh-Like Domain Of Human Adenosylhomocysteinase 3
pdb|3GVP|B Chain B, Human Sahh-Like Domain Of Human Adenosylhomocysteinase 3
pdb|3GVP|C Chain C, Human Sahh-Like Domain Of Human Adenosylhomocysteinase 3
pdb|3GVP|D Chain D, Human Sahh-Like Domain Of Human Adenosylhomocysteinase 3
Length = 435
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/475 (44%), Positives = 288/475 (60%), Gaps = 46/475 (9%)
Query: 6 EKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTI 65
+ S +F VK++ QA+FGR EIE+AE EMP LMA R +P GAKI G H+T
Sbjct: 6 KNSKGSSDFCVKNIKQAEFGRREIEIAEQEMPALMALRKRAQGEKPLAGAKIVGCTHITA 65
Query: 66 QTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKAL 125
QTAVL+ETL ALGA+ RW +CNI+ST + WKGE+ ++WWC ++ +
Sbjct: 66 QTAVLMETLGALGAQCRWAACNIYSTLNEVAAALAESGFPVFAWKGESEDDFWWCIDRCV 125
Query: 126 DWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGL 185
+ G P++I+DDGGD T I+
Sbjct: 126 N-VEGWQPNMILDDGGDLTHWIY------------------------------------- 147
Query: 186 KADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 245
KKY M +++ G+ EE+ TGV RLYQ+ + G L PA+NVNDSVTK KFDNLY CR
Sbjct: 148 ----KKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCR 203
Query: 246 HSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEG 305
S+ DGL R TD+M GK VVCGYG+VGKGC AALK G+ V VTEIDPICALQA M+G
Sbjct: 204 ESILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDG 263
Query: 306 LQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPG 365
+++ L +V+ DI +T TGNK+++ +H+ +MKN+ IVCN+GH + EID+ L T P
Sbjct: 264 FRLVKLNEVIRQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVASLRT-PE 322
Query: 366 VKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWK 425
+ ++ Q D ++P+ I++LAEGRL+NL C+T P+FV+S + T Q +A +EL+
Sbjct: 323 LTWERVRSQVDHVIWPDGKR-IVLLAEGRLLNLSCST-VPTFVLSITATTQALALIELYN 380
Query: 426 EKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKP 480
G+Y++ VY+LPK +DE V T LT EQA Y+ ++ +GP+KP
Sbjct: 381 APE-GRYKQDVYLLPKKMDEYVASLHLPTFDAHLTELTDEQAKYLGLNKNGPFKP 434
>pdb|3MTG|A Chain A, Crystal Structure Of Human S-Adenosyl Homocysteine
Hydrolase Protein
pdb|3MTG|B Chain B, Crystal Structure Of Human S-Adenosyl Homocysteine
Hydrolase Protein
Length = 444
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/478 (42%), Positives = 288/478 (60%), Gaps = 46/478 (9%)
Query: 8 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQT 67
S F VK++ QA+FGR EIE+AE +M L++ R +P GAKI G H+T QT
Sbjct: 13 SKGSSNFCVKNIKQAEFGRREIEIAEQDMSALISLRKRAQGEKPLAGAKIVGCTHITAQT 72
Query: 68 AVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW 127
AVLIETL ALGA+ RW +CNI+STQ+ WKGE+ ++WWC ++ ++
Sbjct: 73 AVLIETLCALGAQCRWSACNIYSTQNEVAAALAEAGVAVFAWKGESEDDFWWCIDRCVNM 132
Query: 128 GPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKA 187
G ++I+DDGGD T ++
Sbjct: 133 D-GWQANMILDDGGDLTHWVY--------------------------------------- 152
Query: 188 DPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHS 247
KKY + +++ G+ EE+ TGV RLYQ+ + G L PA+NVNDSVTK KFDNLY CR S
Sbjct: 153 --KKYPNVFKKIRGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRES 210
Query: 248 LPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ 307
+ DGL R TDVM GK VVCGYG+VGKGC AALK GA V +TEIDPICALQA M+G +
Sbjct: 211 ILDGLKRTTDVMFGGKQVVVCGYGEVGKGCCAALKALGAIVYITEIDPICALQACMDGFR 270
Query: 308 VLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVK 367
V+ L +V+ D+ +T TGNK+++ +H+ +MKN+ IVCN+GH + EID+ L T P +
Sbjct: 271 VVKLNEVIRQVDVVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVTSLRT-PELT 329
Query: 368 RITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK 427
++ Q D ++P+ +++LAEGRL+NL C+T P+FV+S + T Q +A +EL+
Sbjct: 330 WERVRSQVDHVIWPDGKR-VVLLAEGRLLNLSCST-VPTFVLSITATTQALALIELYNAP 387
Query: 428 STGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 485
G+Y++ VY+LPK +DE V T L +QA Y+ ++ +GP+KP +YRY
Sbjct: 388 E-GRYKQDVYLLPKKMDEYVASLHLPSFDAHLTELADDQAKYLGLNKNGPFKPNYYRY 444
>pdb|4HY3|A Chain A, Crystal Structure Of A Phosphoglycerate Oxidoreductase
From Rhizobium Etli
pdb|4HY3|B Chain B, Crystal Structure Of A Phosphoglycerate Oxidoreductase
From Rhizobium Etli
pdb|4HY3|C Chain C, Crystal Structure Of A Phosphoglycerate Oxidoreductase
From Rhizobium Etli
pdb|4HY3|D Chain D, Crystal Structure Of A Phosphoglycerate Oxidoreductase
From Rhizobium Etli
Length = 365
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 255 ATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME-GLQVLTLED 313
A+ +IAG + G+GD+GK L AR+ V DP L E G++ +LED
Sbjct: 169 ASARLIAGSEIGIVGFGDLGKALRRVLSGFRARIRV--FDPWLPRSXLEENGVEPASLED 226
Query: 314 VLSDAD-IFV---TTTGNKDIIMVDHMKKMKNNAIVCNIGHFD 352
VL+ +D IFV T+ NK + + + A + D
Sbjct: 227 VLTKSDFIFVVAAVTSENKRFLGAEAFSSXRRGAAFILLSRAD 269
>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181
pdb|3AWD|B Chain B, Crystal Structure Of Gox2181
pdb|3AWD|C Chain C, Crystal Structure Of Gox2181
pdb|3AWD|D Chain D, Crystal Structure Of Gox2181
Length = 260
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 263 KVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAL----MEGLQVLTL 311
+VA+V G ++G C AL +AGARVI+ ++D A +A+ MEG V ++
Sbjct: 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSV 67
>pdb|1BW9|A Chain A, Phenylalanine Dehydrogenase Structure In Ternary Complex
With Nad+ And Phenylpyruvate
Length = 356
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSD-ADI 320
G +V G G VG A+ +AGA+++V + D A+ G + LEDVLS D+
Sbjct: 176 GLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDV 235
Query: 321 F 321
F
Sbjct: 236 F 236
>pdb|1BXG|A Chain A, Phenylalanine Dehydrogenase Structure In Ternary Complex
With Nad+ And Beta-Phenylpropionate
Length = 356
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSD-ADI 320
G +V G G VG A+ +AGA+++V + D A+ G + LEDVLS D+
Sbjct: 176 GLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDV 235
Query: 321 F 321
F
Sbjct: 236 F 236
>pdb|1C1D|B Chain B, L-Phenylalanine Dehydrogenase Structure In Ternary Complex
With Nadh And L-Phenylalanine
Length = 355
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSD-ADI 320
G +V G G VG A+ +AGA+++V + D A+ G + LEDVLS D+
Sbjct: 175 GLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDV 234
Query: 321 F 321
F
Sbjct: 235 F 235
>pdb|1C1X|B Chain B, L-Phenylalanine Dehydrogenase Structure In Ternary Complex
With Nad+ And L-3-Phenyllactate
Length = 355
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSD-ADI 320
G +V G G VG A+ +AGA+++V + D A+ G + LEDVLS D+
Sbjct: 175 GLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDV 234
Query: 321 F 321
F
Sbjct: 235 F 235
>pdb|1C1X|A Chain A, L-Phenylalanine Dehydrogenase Structure In Ternary Complex
With Nad+ And L-3-Phenyllactate
Length = 355
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSD-ADI 320
G +V G G VG A+ +AGA+++V + D A+ G + LEDVLS D+
Sbjct: 175 GLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDV 234
Query: 321 F 321
F
Sbjct: 235 F 235
>pdb|1BXG|B Chain B, Phenylalanine Dehydrogenase Structure In Ternary Complex
With Nad+ And Beta-Phenylpropionate
Length = 356
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSD-ADI 320
G +V G G VG A+ +AGA+++V + D A+ G + LEDVLS D+
Sbjct: 176 GLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDV 235
Query: 321 F 321
F
Sbjct: 236 F 236
>pdb|1BW9|B Chain B, Phenylalanine Dehydrogenase Structure In Ternary Complex
With Nad+ And Phenylpyruvate
Length = 356
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSD-ADI 320
G +V G G VG A+ +AGA+++V + D A+ G + LEDVLS D+
Sbjct: 176 GLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDV 235
Query: 321 F 321
F
Sbjct: 236 F 236
>pdb|1C1D|A Chain A, L-Phenylalanine Dehydrogenase Structure In Ternary Complex
With Nadh And L-Phenylalanine
Length = 355
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSD-ADI 320
G +V G G VG A+ +AGA+++V + D A+ G + LEDVLS D+
Sbjct: 175 GLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDV 234
Query: 321 F 321
F
Sbjct: 235 F 235
>pdb|1LSS|A Chain A, Ktn Mja218 Crystal Structure In Complex With Nad+
pdb|1LSS|B Chain B, Ktn Mja218 Crystal Structure In Complex With Nad+
pdb|1LSS|C Chain C, Ktn Mja218 Crystal Structure In Complex With Nad+
pdb|1LSS|D Chain D, Ktn Mja218 Crystal Structure In Complex With Nad+
Length = 140
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP-ICA-----LQALM---EGLQVLTLE 312
G ++ G G VG A +L + G +++ +ID IC + AL+ + ++ TLE
Sbjct: 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLE 63
Query: 313 DV-LSDADIFVTTTGNKDI 330
D + DAD+++ TG +++
Sbjct: 64 DAGIEDADMYIAVTGKEEV 82
>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase
(Apo Form) From Fungus Cochliobolus Lunatus
pdb|3QWF|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|E Chain E, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|F Chain F, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|G Chain G, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|H Chain H, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWI|A Chain A, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|B Chain B, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|C Chain C, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|D Chain D, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWH|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
Length = 270
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 14/132 (10%)
Query: 262 GKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADI 320
GKVA+V G G +G A L + GA+V+V + + ++ ++ L + + ADI
Sbjct: 18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADI 77
Query: 321 FVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVF 380
V + K+ + A V + GH D + G+ ++ +K +T + + DR VF
Sbjct: 78 R----------QVPEIVKLFDQA-VAHFGHLDIAVSNSGVVSFGHLKDVT-EEEFDR-VF 124
Query: 381 PETNSGIIVLAE 392
G +A
Sbjct: 125 SLNTRGQFFVAR 136
>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid
Dehydrogenase (Y167f Mutated Form) From Fungus
Cochliobolus Lunatus
Length = 270
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 14/132 (10%)
Query: 262 GKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADI 320
GKVA+V G G +G A L + GA+V+V + + ++ ++ L + + ADI
Sbjct: 18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADI 77
Query: 321 FVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVF 380
V + K+ + A V + GH D + G+ ++ +K +T + + DR VF
Sbjct: 78 R----------QVPEIVKLFDQA-VAHFGHLDIAVSNSGVVSFGHLKDVT-EEEFDR-VF 124
Query: 381 PETNSGIIVLAE 392
G +A
Sbjct: 125 SLNTRGQFFVAR 136
>pdb|3DDN|A Chain A, Crystal Structure Of Hydroxypyruvic Acid Phosphate Bound
D-3- Phosphoglycerate Dehydrogenase In Mycobacterium
Tuberculosis
pdb|3DDN|B Chain B, Crystal Structure Of Hydroxypyruvic Acid Phosphate Bound
D-3- Phosphoglycerate Dehydrogenase In Mycobacterium
Tuberculosis
Length = 528
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP-ICALQALMEGLQVLTLEDVLSDA 318
I GK V G G +G+ A + GA V+ DP + +A G+++L+L+D+L+ A
Sbjct: 139 IFGKTVGVVGLGRIGQLVAQRIAAFGAYVVA--YDPYVSPARAAQLGIELLSLDDLLARA 196
Query: 319 DIFVT-----TTGNKDIIMVDHMKKMKNNAIVCN 347
D F++ T +I + + K K I+ N
Sbjct: 197 D-FISVHLPKTPETAGLIDKEALAKTKPGVIIVN 229
>pdb|1YGY|A Chain A, Crystal Structure Of D-3-Phosphoglycerate Dehydrogenase
From Mycobacterium Tuberculosis
pdb|1YGY|B Chain B, Crystal Structure Of D-3-Phosphoglycerate Dehydrogenase
From Mycobacterium Tuberculosis
pdb|3DC2|A Chain A, Crystal Structure Of Serine Bound D-3-Phosphoglycerate
Dehydrogenase From Mycobacterium Tuberculosis
pdb|3DC2|B Chain B, Crystal Structure Of Serine Bound D-3-Phosphoglycerate
Dehydrogenase From Mycobacterium Tuberculosis
Length = 529
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP-ICALQALMEGLQVLTLEDVLSDA 318
I GK V G G +G+ A + GA V+ DP + +A G+++L+L+D+L+ A
Sbjct: 140 IFGKTVGVVGLGRIGQLVAQRIAAFGAYVVA--YDPYVSPARAAQLGIELLSLDDLLARA 197
Query: 319 DIFVT-----TTGNKDIIMVDHMKKMKNNAIVCN 347
D F++ T +I + + K K I+ N
Sbjct: 198 D-FISVHLPKTPETAGLIDKEALAKTKPGVIIVN 230
>pdb|3OE4|A Chain A, Rat Catechol O-Methyltransferase In Complex With A
Catechol-Type, Purine-Containing Bisubstrate Inhibitor -
Humanized Form
pdb|3OE5|A Chain A, Rat Catechol O-Methyltransferase In Complex With A
Catechol-Type, Pyridylsulfanyl-Containing Inhibitor -
Humanized Form
pdb|3OZR|A Chain A, Rat Catechol O-Methyltransferase In Complex With A
Catechol-Type, Bisubstrate Inhibitor, No Substituent In
The Adenine Site - Humanized Form
pdb|3OZS|A Chain A, Rat Catechol O-Methyltransferase In Complex With A
Catechol-Type, Trifluoromethyl-Imidazolyl-Containing
Inhibitor - Humanized Form
pdb|3OZT|A Chain A, Rat Catechol O-Methyltransferase In Complex With A
Catechol-Type, 4- Oxo-Pyridinyl-Containing Inhibitor -
Humanized Form
pdb|3NWE|A Chain A, Rat Comt In Complex With A Methylated Desoxyribose
Bisubstrate- Containing Inhibitor Avoids Hydroxyl Group
pdb|3R6T|A Chain A, Rat Catechol O-Methyltransferase In Complex With The
Bisubstrate Inhibitor
4'-Fluoro-4,5-Dihydroxy-Biphenyl-3-Carboxylic Acid
{(E)-3-
[(2s,4r,
5r)-4-Hydroxy-5-(6-Methyl-Purin-9-Yl)-Tetrahydro-Furan-
2-Yl]- Allyl}-Amide
pdb|3U81|A Chain A, Crystal Structure Of A Sah-Bound Semi-Holo Form Of Rat
Catechol-O- Methyltransferase
Length = 221
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 240 NLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICA 298
N+ + + D ++R + ++ CGY V A L Q GAR++ EI+P CA
Sbjct: 41 NVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVR---MARLLQPGARLLTMEINPDCA 96
>pdb|1XDW|A Chain A, Nad+-Dependent (R)-2-Hydroxyglutarate Dehydrogenase From
Acidaminococcus Fermentans
Length = 331
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 267 VCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVT--- 323
V G G +G+ A GA VI ++ I + + + ++L++VL +DI
Sbjct: 151 VVGLGRIGRVAAQIFHGMGATVIGEDVFEI---KGIEDYCTQVSLDEVLEKSDIITIHAP 207
Query: 324 -TTGNKDIIMVDHMKKMKNNAIVCN 347
N ++ D +KKMK+ AI+ N
Sbjct: 208 YIKENGAVVTRDFLKKMKDGAILVN 232
>pdb|3VPX|A Chain A, Crystal Structure Of Leucine Dehydrogenase From A
Psychrophilic Bacterium Sporosarcina Psychrophila.
pdb|3VPX|B Chain B, Crystal Structure Of Leucine Dehydrogenase From A
Psychrophilic Bacterium Sporosarcina Psychrophila
Length = 364
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 257 DVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQAL-MEGLQVLTLEDVL 315
D +AGK V G G+V L + GA++I+T+I+ +A+ G + + ++
Sbjct: 168 DDSLAGKTVAVQGVGNVAYALCEYLHEEGAKLIITDINEEAVQRAVDAFGATAVGINEIY 227
Query: 316 S-DADIF 321
S +ADIF
Sbjct: 228 SQEADIF 234
>pdb|2EKL|A Chain A, Structure Of St1218 Protein From Sulfolobus Tokodaii
Length = 313
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319
+AGK + G+G +G G +V+ +I I +A + ++LE++L ++D
Sbjct: 140 LAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKINAKAVSLEELLKNSD 198
Query: 320 IF---VTTTGN-KDIIMVDHMKKMKNNAIVCN 347
+ VT + + K II + MK+N I+ N
Sbjct: 199 VISLHVTVSKDAKPIIDYPQFELMKDNVIIVN 230
>pdb|3IJF|X Chain X, Crystal Structure Of Cytidine Deaminase From Mycobacterium
Tuberculosis
Length = 133
Score = 30.4 bits (67), Expect = 2.5, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 393 GRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
GRL+ L C GH S +M C QV+ +
Sbjct: 71 GRLLALACVDGHGSVLMPCGRCRQVLLE 98
>pdb|1V9L|A Chain A, L-Glutamate Dehydrogenase From Pyrobaculum Islandicum
Complexed With Nad
pdb|1V9L|B Chain B, L-Glutamate Dehydrogenase From Pyrobaculum Islandicum
Complexed With Nad
pdb|1V9L|C Chain C, L-Glutamate Dehydrogenase From Pyrobaculum Islandicum
Complexed With Nad
pdb|1V9L|D Chain D, L-Glutamate Dehydrogenase From Pyrobaculum Islandicum
Complexed With Nad
pdb|1V9L|E Chain E, L-Glutamate Dehydrogenase From Pyrobaculum Islandicum
Complexed With Nad
pdb|1V9L|F Chain F, L-Glutamate Dehydrogenase From Pyrobaculum Islandicum
Complexed With Nad
Length = 421
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVI-VTEIDPICALQALMEGLQV 308
I GK + G G+VG+ A L++ GA+VI V++I+ + + EGL V
Sbjct: 208 IEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRK---EGLNV 254
>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|B Chain B, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|C Chain C, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|D Chain D, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3RWB|A Chain A, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|B Chain B, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|C Chain C, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|D Chain D, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
Length = 247
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 260 IAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEID 294
+AGK A+V G +GK AA L GA VIV++I+
Sbjct: 4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDIN 39
>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh
And 7-Oxo Glycochenodeoxycholic Acid
pdb|1AHI|B Chain B, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh
And 7-Oxo Glycochenodeoxycholic Acid
pdb|1AHH|A Chain A, 7 Alpha-hydroxysteroid Dehydrogenase Complexed With Nad+
pdb|1AHH|B Chain B, 7 Alpha-hydroxysteroid Dehydrogenase Complexed With Nad+
pdb|1FMC|A Chain A, 7-Alpha-Hydroxysteroid Dehydrogenase Complex With Nadh And
7-Oxo Glycochenodeoxycholic Acid
pdb|1FMC|B Chain B, 7-Alpha-Hydroxysteroid Dehydrogenase Complex With Nadh And
7-Oxo Glycochenodeoxycholic Acid
Length = 255
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 252 LMRATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-- 308
+ + ++ + GK A++ G G +GK A AGA V+V++I+ A + E Q+
Sbjct: 1 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG 60
Query: 309 --------LTLEDVLSD-ADIFVTTTGNKDIIM 332
+T E LS AD ++ G DI++
Sbjct: 61 QAFACRCDITSEQELSALADFAISKLGKVDILV 93
>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|B Chain B, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|C Chain C, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|D Chain D, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
Length = 271
Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 248 LPDGLMRATDVM-IAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME 304
+P G M + + G+ A+V G +G+ A L AGAR+++ DP Q + E
Sbjct: 11 VPRGSMSNQIIFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQE 69
>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|B Chain B, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|C Chain C, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|D Chain D, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
Length = 247
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 260 IAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEID 294
+AGK A+V G +GK AA L GA VIV++I+
Sbjct: 4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDIN 39
>pdb|1HRD|A Chain A, Glutamate Dehydrogenase
pdb|1HRD|B Chain B, Glutamate Dehydrogenase
pdb|1HRD|C Chain C, Glutamate Dehydrogenase
pdb|1BGV|A Chain A, Glutamate Dehydrogenase
Length = 449
Score = 28.1 bits (61), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 219 NGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCA 278
NG L A + S+ + + YG + + + +M+ + + GK + G+G+V G A
Sbjct: 189 NGVLTGKARSFGGSLVRPEATG-YGSVYYV-EAVMKHENDTLVGKTVALAGFGNVAWGAA 246
Query: 279 AALKQAGARVI 289
L + GA+ +
Sbjct: 247 KKLAELGAKAV 257
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,254,154
Number of Sequences: 62578
Number of extensions: 589951
Number of successful extensions: 1748
Number of sequences better than 100.0: 75
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 1639
Number of HSP's gapped (non-prelim): 86
length of query: 485
length of database: 14,973,337
effective HSP length: 103
effective length of query: 382
effective length of database: 8,527,803
effective search space: 3257620746
effective search space used: 3257620746
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)