BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011466
(485 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 358 bits (920), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 175/452 (38%), Positives = 278/452 (61%), Gaps = 10/452 (2%)
Query: 1 MNLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFR 60
M++ ++ RE + SGKT+ +R QL+ L+ + E + I AL DLGK+ ++
Sbjct: 1 MSISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYY 60
Query: 61 DEIGVLQKSINFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLS 120
+E+ + + ++ ++ L +W + I EPLG+VL+I +WN+P L+
Sbjct: 61 EEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLT 120
Query: 121 LEPLIGAIAAGNTVVLKPSEXXXXXXXXXXXXXPTYIDSKAIKVIEGGPAVGEHLLQQKW 180
++P++GA+AAGN V+LKPSE P Y+D V++GG LL++++
Sbjct: 121 IQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERF 180
Query: 181 DKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYG 240
D I +TGST VG++VM+AA KHLTP+TLELGGK P +D D + A +RI K+
Sbjct: 181 DHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDK---DCDLDVACRRIAWGKFM 237
Query: 241 PCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNSIARIINKHHFSRLKNL 300
+GQ C+A DY+L + + +VE LK +K GE+ ++S RIIN HF R+K L
Sbjct: 238 N-SGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGL 296
Query: 301 LNDPMVKDSIVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSID 360
+++ + +GG+ D+++ +I PT+LVD Q+ +M EEIFGP++PI+ ++ +E++I
Sbjct: 297 IDN----QKVAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQ 352
Query: 361 FINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSY 420
FIN R KPL +Y F+ NE++ ++M++ETSSG + ND ++ TLPFGG+G SG+G+Y
Sbjct: 353 FINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAY 412
Query: 421 HGKFSFDAFSHHKPVVRRSYLSEIWF--RFPP 450
HGK SF+ FSH + + +S L+E R+PP
Sbjct: 413 HGKKSFETFSHRRSCLVKSLLNEEAHKARYPP 444
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 356 bits (913), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 175/442 (39%), Positives = 272/442 (61%), Gaps = 10/442 (2%)
Query: 11 REYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSI 70
R + SG+T+ +R QL+ L+ ++E+E+++ AL DL K+ A+ +E+ + + I
Sbjct: 28 RAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEI 87
Query: 71 NFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAA 130
+ +Q L EW + + + I EPLG+VL+I +WN+P L+++P++GAIAA
Sbjct: 88 EYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAA 147
Query: 131 GNTVVLKPSEXXXXXXXXXXXXXPTYIDSKAIKVIEGGPAVGEHLLQQKWDKIFFTGSTR 190
GN VVLKPSE P Y+D VI GG LL++++D I +TGST
Sbjct: 148 GNAVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELLKERFDHILYTGSTG 207
Query: 191 VGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAI 250
VG+++M+AA KHLTP+TLELGGK P +D + D + A +RI K+ +GQ C+A
Sbjct: 208 VGKIIMTAAAKHLTPVTLELGGKSPCYVD---KNCDLDVACRRIAWGKFM-NSGQTCVAP 263
Query: 251 DYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNSIARIINKHHFSRLKNLLNDPMVKDSI 310
DY+L + + +VE LK +K+ GE+ +KS RII+ HF R+ L+ +
Sbjct: 264 DYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEG----QKV 319
Query: 311 VYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLV 370
YGG+ D A +I PT+L D Q+ +M EEIFGP+LPI+ ++ +E++I FIN R KPL
Sbjct: 320 AYGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLA 379
Query: 371 IYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFS 430
+Y F+ N+++ ++M++ETSSG + ND ++ +LPFGG+G SG+GSYHGK SF+ FS
Sbjct: 380 LYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFS 439
Query: 431 HHKPVVRRSYLSE--IWFRFPP 450
H + + R +++ + R+PP
Sbjct: 440 HRRSCLVRPLMNDEGLKVRYPP 461
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/426 (35%), Positives = 226/426 (53%), Gaps = 11/426 (2%)
Query: 11 REYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSI 70
+ Y+ + T + +RK L+RLK + + +Y AL +DLGK EIG + I
Sbjct: 38 KAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEI 97
Query: 71 NFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAA 130
+FAL +L EW++ P + S +V EP G+ II +N+P+ L+L PLIGAI
Sbjct: 98 DFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIG 157
Query: 131 GNTVVLKPSEXXXXXXXXXXXXXPTYIDSKAIKVIEGGPAVGEHLLQQKWDKIFFTGSTR 190
GNT ++KPSE + + VI+GG HLL +D IFFTGS
Sbjct: 158 GNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPN 217
Query: 191 VGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAI 250
VG++VM AA KHLTP+ LELGGKCP I+ D + V +++ K+ +GQ CIA
Sbjct: 218 VGKVVMQAAAKHLTPVVLELGGKCPLIV---LPDADLDQTVNQLMFGKF-INSGQTCIAP 273
Query: 251 DYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNSIARIINKHHFSRLKNLLNDPMVKDSI 310
DYL V L+E L +K L E NS +++ + RL +LL + +
Sbjct: 274 DYLYVHYSVKDALLERLVERVKTELPE----INSTGKLVTERQVQRLVSLLE--ATQGQV 327
Query: 311 VYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINS-RPKPL 369
+ G D + + TV+ +M+EE+FGP+LP++ + +ID +N PKPL
Sbjct: 328 LVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPL 387
Query: 370 VIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAF 429
+Y F K+ + + ++++ SG N ++ + LPFGGIG SG+G YHG FS+ F
Sbjct: 388 AVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTF 447
Query: 430 SHHKPV 435
+H K V
Sbjct: 448 THKKSV 453
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 262 bits (669), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/426 (35%), Positives = 225/426 (52%), Gaps = 11/426 (2%)
Query: 11 REYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSI 70
+ Y+ + T + +RK L+RLK + + +Y AL +DLGK EIG + I
Sbjct: 38 KAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEI 97
Query: 71 NFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAA 130
+FAL +L EW++ P + S +V EP G+ II +N+P+ L+L PLIGAI
Sbjct: 98 DFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIG 157
Query: 131 GNTVVLKPSEXXXXXXXXXXXXXPTYIDSKAIKVIEGGPAVGEHLLQQKWDKIFFTGSTR 190
GNT ++KPSE + + VI+GG HLL +D IFFTGS
Sbjct: 158 GNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPN 217
Query: 191 VGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAI 250
VG++VM AA KHLTP+ LELGGKCP I+ D + V +++ K+ +GQ IA
Sbjct: 218 VGKVVMQAAAKHLTPVVLELGGKCPLIV---LPDADLDQTVNQLMFGKF-INSGQTXIAP 273
Query: 251 DYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNSIARIINKHHFSRLKNLLNDPMVKDSI 310
DYL V L+E L +K L E NS +++ + RL +LL + +
Sbjct: 274 DYLYVHYSVKDALLERLVERVKTELPE----INSTGKLVTERQVQRLVSLLE--ATQGQV 327
Query: 311 VYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINS-RPKPL 369
+ G D + + TV+ +M+EE+FGP+LP++ + +ID +N PKPL
Sbjct: 328 LVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPL 387
Query: 370 VIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAF 429
+Y F K+ + + ++++ SG N ++ + LPFGGIG SG+G YHG FS+ F
Sbjct: 388 AVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTF 447
Query: 430 SHHKPV 435
+H K V
Sbjct: 448 THKKSV 453
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 189/425 (44%), Gaps = 33/425 (7%)
Query: 23 SWRKLQLQRLKAFLK-------EKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQ 75
+WR L + L+ E + D+ R + + GK EA + I++A
Sbjct: 62 AWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEA--------KGEISYA-A 112
Query: 76 NLKEWMSSKKAKLPAVAVLSYAE-----IVPEPLGLVLIISSWNFPIGLSLEPLIGAIAA 130
+ EW + + ++ + + ++ +P+G+ I+ WNFP + A+AA
Sbjct: 113 SFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAA 172
Query: 131 GNTVVLKP-SEXXXXXXXXXXXXXPTYIDSKAIKVIEGGP-AVGEHLLQQKW-DKIFFTG 187
G T+VLKP S+ + + V+ G AVG L K+ FTG
Sbjct: 173 GCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTG 232
Query: 188 STRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQAC 247
ST +GR +M K + ++LELGG P I+ D + AV+ + SK+ AGQ C
Sbjct: 233 STEIGRQLMEQCAKDIKKVSLELGGNAPFIV---FDDADLDKAVEGALASKF-RNAGQTC 288
Query: 248 IAIDYLLVEEKFTSTLVELLKVHIKKM-LGENPRKSNSIARIINKHHFSRLKNLLNDPMV 306
+ + L V++ E L+ + K+ +G+ +I +I++ ++++ + D +
Sbjct: 289 VCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALE 348
Query: 307 KDS-IVYGGSVDE-ANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINS 364
K + +V GG E F +PT+LVD P A + EE FGPL P+ K D I N
Sbjct: 349 KGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQAND 408
Query: 365 RPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKF 424
L Y + ++ R+ G + N +I + PFGGI SG+G K+
Sbjct: 409 TEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIIS--NEVAPFGGIKASGLGREGSKY 466
Query: 425 SFDAF 429
+ +
Sbjct: 467 GIEDY 471
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 189/425 (44%), Gaps = 33/425 (7%)
Query: 23 SWRKLQLQRLKAFLK-------EKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQ 75
+WR L + L+ E + D+ R + + GK EA + I++A
Sbjct: 62 AWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEA--------KGEISYA-A 112
Query: 76 NLKEWMSSKKAKLPAVAVLSYAE-----IVPEPLGLVLIISSWNFPIGLSLEPLIGAIAA 130
+ EW + + ++ + + ++ +P+G+ I+ WNFP + A+AA
Sbjct: 113 SFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAA 172
Query: 131 GNTVVLKP-SEXXXXXXXXXXXXXPTYIDSKAIKVIEGGP-AVGEHLLQQKW-DKIFFTG 187
G T+VLKP S+ + + V+ G AVG L K+ FTG
Sbjct: 173 GCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTG 232
Query: 188 STRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQAC 247
ST +GR +M K + ++LELGG P I+ D + AV+ + SK+ AGQ C
Sbjct: 233 STEIGRQLMEQCAKDIKKVSLELGGNAPFIV---FDDADLDKAVEGALASKF-RNAGQTC 288
Query: 248 IAIDYLLVEEKFTSTLVELLKVHIKKM-LGENPRKSNSIARIINKHHFSRLKNLLNDPMV 306
+ + L V++ E L+ + K+ +G+ +I +I++ ++++ + D +
Sbjct: 289 VCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALE 348
Query: 307 KDS-IVYGGSVDE-ANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINS 364
K + +V GG E F +PT+LVD P A + EE FGPL P+ K D I N
Sbjct: 349 KGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQAND 408
Query: 365 RPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKF 424
L Y + ++ R+ G + N +I + PFGGI SG+G K+
Sbjct: 409 TEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIIS--NEVAPFGGIKASGLGREGSKY 466
Query: 425 SFDAF 429
+ +
Sbjct: 467 GIEDY 471
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 199/441 (45%), Gaps = 26/441 (5%)
Query: 25 RKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWMSSK 84
R L+ + A + EK+ + D GK EA D V FA Q E + K
Sbjct: 71 RATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQ--AEALDGK 128
Query: 85 KAKLPAVAVLSY--AEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXX 142
+ K P + + ++ +PLG+V +IS WN+P+ ++ + A+AAG T VLKPSE
Sbjct: 129 Q-KAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELA 187
Query: 143 XXXXXX-XXXXXPTYIDSKAIKVIEG-GPAVGEHLLQQ-KWDKIFFTGSTRVGRMVMSAA 199
+ + ++ G GP G L+ DKI FTGS+ G VM++A
Sbjct: 188 SVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASA 247
Query: 200 VKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKF 259
+ + P+TLELGGK P ++ D + V+ I + GQ C A LLV E
Sbjct: 248 AQLVKPVTLELGGKSPIVV---FEDVDIDKVVEWTIFGCFW-TNGQICSATSRLLVHESI 303
Query: 260 TSTLVELLKVHIKKMLGENP-RKSNSIARIINKHHFSRLKNLLNDPMVKD-SIVYGGSVD 317
+ V+ L K + +P + + +I+K + ++ ++ + +I+YGGS
Sbjct: 304 AAEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRP 363
Query: 318 E---ANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAF 374
E +IEPT++ D I EE+FGP+L + T +++I N L F
Sbjct: 364 EHLKKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVF 423
Query: 375 TKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKP 434
+ + R+ G++ N + FV P+GGI SG G G++ + + K
Sbjct: 424 SNDLERCERITKALEVGAVWVNCSQPCFV--QAPWGGIKRSGFGRELGEWGIQNYLNIKQ 481
Query: 435 VVRRSYLSEIWFRFPPWNNYK 455
V + +S+ PW YK
Sbjct: 482 VTQD--ISD-----EPWGWYK 495
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 155/340 (45%), Gaps = 16/340 (4%)
Query: 99 IVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXXXXXXXXXXXXXPTYID 158
+V E +G+ +I+ WNFP + L A AAG+ VVLKPSE
Sbjct: 135 VVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGV 194
Query: 159 SKAI-KVIEG-GPAVGEHLLQQ-KWDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCP 215
K + ++ G G VG L + K FTGS G + A K ++LELGGK P
Sbjct: 195 PKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAAKDFKKVSLELGGKSP 254
Query: 216 AIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKML 275
I+ L KEAA + K GQ C A +LV K + LK ++
Sbjct: 255 YIV--LDDVDIKEAA--KATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVR 310
Query: 276 GENPRKSNS-IARIINKHHFSRLKNLLNDPMVKDS-IVYGGSVD----EANLFIEPTVLV 329
NPR+ + + II+K F +++N +N + + + + YGG E F PT+ +
Sbjct: 311 VGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFI 370
Query: 330 DPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETS 389
+ Q I EEIFGP+ +IT ++++I N L Y K++ ++
Sbjct: 371 NVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIE 430
Query: 390 SGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAF 429
+G++ N+A + LPFGG +SG+G G + + F
Sbjct: 431 AGTVEINEAGRK---PDLPFGGYKQSGLGREWGDYGIEEF 467
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 201/441 (45%), Gaps = 26/441 (5%)
Query: 25 RKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWMSSK 84
R L+ + A + E++ ++ + D GK + EA D V FA Q E + +
Sbjct: 91 RAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAWDMDDVAGCFEYFADQ--AEALDKR 148
Query: 85 KAKLPAVAVLSY-AEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXXX 143
+ ++ + ++ + EP+G+V +I+ WN+P+ ++ + A+AAG T VLKPSE
Sbjct: 149 QNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSELAS 208
Query: 144 XXXXXXXX-XXPTYIDSKAIKVIEG-GPAVGEHL-LQQKWDKIFFTGSTRVGRMVMSAAV 200
+ S + ++ G GP G L DK+ FTGS G+ +M++A
Sbjct: 209 VTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGKKIMASAA 268
Query: 201 KHLTPITLELGGKCPAII-DSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKF 259
+ P+TLELGGK P ++ D + D + AV+ + + GQ C A LL+ K
Sbjct: 269 PMVKPVTLELGGKSPIVVFDDV----DIDKAVEWTLFGCFW-TNGQICSATSRLLIHTKI 323
Query: 260 TSTLVELLKVHIKKMLGENP-RKSNSIARIINKHHFSRLKNLLNDPMVKDSIVYGGSVDE 318
E + K + +P + + ++++ + ++K +++ + + + G V
Sbjct: 324 AKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVRP 383
Query: 319 ANL----FIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAF 374
A+L FIEPT++ D I EE+FGP+L + +++I+ N L
Sbjct: 384 AHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVI 443
Query: 375 TKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKP 434
+ + +R+ E +G I N + F P+GG SG G G+ D + K
Sbjct: 444 SGDRERCQRLSEEIDAGCIWVNCSQPCFC--QAPWGGNKRSGFGRELGEGGIDNYLSVKQ 501
Query: 435 VVRRSYLSEIWFRFPPWNNYK 455
V Y+S+ PW Y+
Sbjct: 502 VTE--YISD-----EPWGWYQ 515
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 195/457 (42%), Gaps = 19/457 (4%)
Query: 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRD 61
+ E+ +Q + + + + + R L R A ++ K+ + L ++ GK EA D
Sbjct: 75 HAEKAIQAAAKAFETWRYTDPEERAAVLFRAVAKVRRKKHEFSALLVKEAGKPWNEADAD 134
Query: 62 EIGVLQKSINFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSL 121
++I+F ++ + K K + V P G+ ++I WNF +
Sbjct: 135 ----TAEAIDFMEYYARQMIELAKGKPVNSREGERNQYVYTPTGVTVVIPPWNFLFAIMA 190
Query: 122 EPLIGAIAAGNTVVLKP-SEXXXXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHLLQQ- 178
+ I GNTVVLKP S + + + + G G VG++L+
Sbjct: 191 GTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEESGLPKGVVNFVPGSGAEVGDYLVDHP 250
Query: 179 KWDKIFFTGSTRVGRMVMSAAVK------HLTPITLELGGKCPAIIDSLTSSWDKEAAVK 232
K I FTGS VG + A K HL + E+GGK ++D D E A +
Sbjct: 251 KTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIAEMGGKDTVVVDE---DCDIELAAQ 307
Query: 233 RIIVSKYGPCAGQACIAIDYLLVEEK-FTSTLVELLKVHIKKMLGENPRKSNSIARIINK 291
I S +G AGQ C A +V EK + L ++++ K +GE + +I++
Sbjct: 308 SIFTSAFG-FAGQKCSAGSRAVVHEKVYDEVLKRVIEITESKKVGEPDSADVYMGPVIDQ 366
Query: 292 HHFSRLKNLLNDPMVKDSIVYGGSVDEA-NLFIEPTVLVDPPLQAAIMTEEIFGPLLPII 350
F+++ + + + +V GG D++ FIEPT+ D +A +M EEIFGP++
Sbjct: 367 ASFNKIMDYIEIGKEEGRLVSGGKGDDSKGYFIEPTIFADLDPKARLMQEEIFGPVVAFS 426
Query: 351 TLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFG 410
+ +++++ N+ L TKN R E G++ FN + PFG
Sbjct: 427 KVSSFDEALEVANNTEYGLTGAVITKNRDHINRAKQEFHVGNLYFNRNCTGAIVGYHPFG 486
Query: 411 GIGESGIGSYHGKFSFDAFSHHKPVVRRSYLSEIWFR 447
G SG S G + A + + ++F+
Sbjct: 487 GFKMSGTDSKAGGPDYLALHMQAKTISEMFAENLYFQ 523
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 194/436 (44%), Gaps = 23/436 (5%)
Query: 14 YRSGKTKEASWRKLQLQRLKAFL--------KEKERDIYRALNQDLGKHHVEAFRDEIGV 65
Y S K + +WR L A+L ++KE+ I L++++ K + A E+
Sbjct: 46 YASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK-IGAILSKEVAKGYKSAV-SEVVR 103
Query: 66 LQKSINFALQN--LKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEP 123
+ IN+A + E + A + A + EP+GLVL IS +N+P+ L+
Sbjct: 104 TAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSK 163
Query: 124 LIGAIAAGNTVVLK-PSEXXXXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHLLQ-QKW 180
+ A+ AGN + K P++ + + I G G +G+++++ Q
Sbjct: 164 IAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAV 223
Query: 181 DKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYG 240
+ I FTGST +G + A + PI LELGGK AI+ D E K II +G
Sbjct: 224 NFINFTGSTGIGERIGKMA--GMRPIMLELGGKDSAIV---LEDADLELTAKNIIAGAFG 278
Query: 241 PCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNSIARIINKHHFSRLKNL 300
+GQ C A+ +LV E LVE ++ + + NP I +I+ ++ L
Sbjct: 279 -YSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGL 337
Query: 301 LNDPMVKDSIVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSID 360
+ND K + E NL I P + + EE FGP+LPII + +E++I+
Sbjct: 338 INDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIE 396
Query: 361 FINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSY 420
N L FT + + + G++ N+ Q D PF G +SG G
Sbjct: 397 ISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKT-QRGTDNFPFLGAKKSGAGIQ 455
Query: 421 HGKFSFDAFSHHKPVV 436
K+S +A + K VV
Sbjct: 456 GVKYSIEAMTTVKSVV 471
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 180/423 (42%), Gaps = 26/423 (6%)
Query: 18 KTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNL 77
+ K A R L+R + D+ L + GK EA + EI I
Sbjct: 67 RMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEA-KGEIAYAASFI------- 118
Query: 78 KEWMSSKKAK-----LPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGN 132
EW + + + LP +V EP+G+ I+ WNFP + + A+AAG
Sbjct: 119 -EWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGC 177
Query: 133 TVVLKPSEXXXXXXXXXXXXXP-TYIDSKAIKVIEGGP-AVGEHLLQQKW-DKIFFTGST 189
+V+KP+E + + V+ G P A+G + K+ FTGST
Sbjct: 178 PIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGST 237
Query: 190 RVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIA 249
VGR++M+ + + +TLELGG P I+ D +AAV+ I SKY GQ C+
Sbjct: 238 AVGRLLMAQSAPTVKKLTLELGGNAPFIV---FDDADLDAAVEGAIASKY-RNNGQTCVC 293
Query: 250 IDYLLVEEKFTSTLVELLKVHIKKM-LGENPRKSNSIARIINKHHFSRLKNLLNDPMVKD 308
+ V E+ + L + K+ +G ++ +IN+ ++++ + D + K
Sbjct: 294 TNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKG 353
Query: 309 SIVYGGSVDEA--NLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRP 366
+ + G A + F EPTVL + EE FGPL P+ E+ + N
Sbjct: 354 ASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTE 413
Query: 367 KPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSF 426
L Y ++++ R+ G + N +I + PFGG+ +SG+G +
Sbjct: 414 FGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLIS--NEVAPFGGVKQSGLGREGSHYGI 471
Query: 427 DAF 429
D +
Sbjct: 472 DDY 474
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 158/344 (45%), Gaps = 13/344 (3%)
Query: 99 IVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSE-XXXXXXXXXXXXXPTYI 157
++ EP+G+V II+ WNFP ++ E + AI +G TVVLKPSE I
Sbjct: 157 VLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGI 216
Query: 158 DSKAIKVIEG-GPAVGEHLLQQ-KWDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCP 215
V+ G G G+ L + D + FTGS RVG + A + + + LELGGK P
Sbjct: 217 PDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGP 276
Query: 216 AIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVE-LLKVHIKKM 274
I+ + + + AGQ CI+ LLV+E L E LL + K
Sbjct: 277 QIVFADADLDAAADGIAYGVYHN----AGQCCISGSRLLVQEGIRDALXERLLDISRKVA 332
Query: 275 LGENPRKSNSIARIINKHHFSRLKNLLNDPMVKDS-IVYGGS--VDEANLFIEPTVLVDP 331
G+ + I I++ H ++ + + + + ++ GG EA L+ PTV
Sbjct: 333 FGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGV 392
Query: 332 PLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSG 391
+I EEIFGP+L +T K ++++ N+ L ++ N + + +G
Sbjct: 393 TPDXSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAG 452
Query: 392 SIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPV 435
N +VI + LP GG +SG+G G++ FD +S K V
Sbjct: 453 RCWIN-SVIDGTPE-LPIGGYKKSGLGRELGRYGFDEYSQFKGV 494
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 194/436 (44%), Gaps = 23/436 (5%)
Query: 14 YRSGKTKEASWRKLQLQRLKAFL--------KEKERDIYRALNQDLGKHHVEAFRDEIGV 65
Y S K + +WR L A+L ++KE+ I L++++ K + A E+
Sbjct: 46 YASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK-IGAILSKEVAKGYKSAV-SEVVR 103
Query: 66 LQKSINFALQN--LKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEP 123
+ IN+A + E + A + A + EP+GLVL IS +N+P+ L+
Sbjct: 104 TAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSK 163
Query: 124 LIGAIAAGNTVVLK-PSEXXXXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHLLQ-QKW 180
+ A+ AGN + K P++ + + I G G +G+++++ Q
Sbjct: 164 IAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAV 223
Query: 181 DKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYG 240
+ I F+GST +G + A + PI LELGGK AI+ D E K II +G
Sbjct: 224 NFINFSGSTGIGERIGKMA--GMRPIMLELGGKDSAIV---LEDADLELTAKNIIAGAFG 278
Query: 241 PCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNSIARIINKHHFSRLKNL 300
+GQ C A+ +LV E LVE ++ + + NP I +I+ ++ L
Sbjct: 279 -YSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGL 337
Query: 301 LNDPMVKDSIVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSID 360
+ND K + E NL I P + + EE FGP+LPII + +E++I+
Sbjct: 338 INDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIE 396
Query: 361 FINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSY 420
N L FT + + + G++ N+ Q D PF G +SG G
Sbjct: 397 ISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKT-QRGTDNFPFLGAKKSGAGIQ 455
Query: 421 HGKFSFDAFSHHKPVV 436
K+S +A + K VV
Sbjct: 456 GVKYSIEAMTTVKSVV 471
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 193/436 (44%), Gaps = 23/436 (5%)
Query: 14 YRSGKTKEASWRKLQLQRLKAFL--------KEKERDIYRALNQDLGKHHVEAFRDEIGV 65
Y S K + +WR L A+L ++KE+ I L++++ K + A E+
Sbjct: 46 YASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK-IGAILSKEVAKGYKSAV-SEVVR 103
Query: 66 LQKSINFALQN--LKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEP 123
+ IN+A + E + A + A + EP+GLVL IS +N+P+ L+
Sbjct: 104 TAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSK 163
Query: 124 LIGAIAAGNTVVLK-PSEXXXXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHLLQ-QKW 180
+ A+ AGN + K P++ + + I G G +G+++++ Q
Sbjct: 164 IAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAV 223
Query: 181 DKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYG 240
+ I FTGST +G + A + PI L LGGK AI+ D E K II +G
Sbjct: 224 NFINFTGSTGIGERIGKMA--GMRPIMLALGGKDSAIV---LEDADLELTAKNIIAGAFG 278
Query: 241 PCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNSIARIINKHHFSRLKNL 300
+GQ C A+ +LV E LVE ++ + + NP I +I+ ++ L
Sbjct: 279 -YSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGL 337
Query: 301 LNDPMVKDSIVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSID 360
+ND K + E NL I P + + EE FGP+LPII + +E++I+
Sbjct: 338 INDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIE 396
Query: 361 FINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSY 420
N L FT + + + G++ N+ Q D PF G +SG G
Sbjct: 397 ISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKT-QRGTDNFPFLGAKKSGAGIQ 455
Query: 421 HGKFSFDAFSHHKPVV 436
K+S +A + K VV
Sbjct: 456 GVKYSIEAMTTVKSVV 471
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 194/447 (43%), Gaps = 24/447 (5%)
Query: 2 NLERDLQDMREYYRSG---KTKEASWRKLQLQRLKAFLKEKERDIYRALNQ-DLGKHHVE 57
++++ ++ R ++ G + +AS R L RL A L E++R AL D GK +V
Sbjct: 52 DVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRL-ADLIERDRTYLAALETLDNGKPYVI 110
Query: 58 AFRDEIGVLQKSINFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPI 117
++ ++ ++ K + + W K + ++ EP+G+ I WNFP+
Sbjct: 111 SYLVDLDMVLKCLRY----YAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPL 166
Query: 118 GLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHL 175
+ L A+A GN VV+K +E + ++ G GP G +
Sbjct: 167 LMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAI 226
Query: 176 L-QQKWDKIFFTGSTRVGRMV-MSAAVKHLTPITLELGGKCPAIIDSLTS-SWDKEAAVK 232
+ DK+ FTGST +GR++ ++A +L +TLELGGK P II S W E A
Sbjct: 227 ASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHF 286
Query: 233 RIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNS-IARIINK 291
+ ++ GQ C A V+E VE K + NP S + +++
Sbjct: 287 ALFFNQ-----GQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDE 341
Query: 292 HHFSRLKNLLNDPMVKDS--IVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPI 349
F ++ +N + + + GG + FI+PTV D I EEIFGP++ I
Sbjct: 342 TQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQI 401
Query: 350 ITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPF 409
+ K IE+ + N+ L FTK+ + +G++ N PF
Sbjct: 402 LKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVN--CYDVFGAQSPF 459
Query: 410 GGIGESGIGSYHGKFSFDAFSHHKPVV 436
GG SG G G++ A++ K V
Sbjct: 460 GGYKMSGSGRELGEYGLQAYTEVKTVT 486
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 194/447 (43%), Gaps = 24/447 (5%)
Query: 2 NLERDLQDMREYYRSG---KTKEASWRKLQLQRLKAFLKEKERDIYRALNQ-DLGKHHVE 57
++++ ++ R ++ G + +AS R L RL A L E++R AL D GK +V
Sbjct: 58 DVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRL-ADLIERDRTYLAALETLDNGKPYVI 116
Query: 58 AFRDEIGVLQKSINFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPI 117
++ ++ ++ K + + W K + ++ EP+G+ I WNFP+
Sbjct: 117 SYLVDLDMVLKCLRY----YAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPL 172
Query: 118 GLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHL 175
+ L A+A GN VV+K +E + ++ G GP G +
Sbjct: 173 LMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAI 232
Query: 176 L-QQKWDKIFFTGSTRVGRMV-MSAAVKHLTPITLELGGKCPAIIDSLTS-SWDKEAAVK 232
+ DK+ FTGST +GR++ ++A +L +TLELGGK P II S W E A
Sbjct: 233 ASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHF 292
Query: 233 RIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNS-IARIINK 291
+ ++ GQ C A V+E VE K + NP S + +++
Sbjct: 293 ALFFNQ-----GQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDE 347
Query: 292 HHFSRLKNLLNDPMVKDS--IVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPI 349
F ++ +N + + + GG + FI+PTV D I EEIFGP++ I
Sbjct: 348 TQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQI 407
Query: 350 ITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPF 409
+ K IE+ + N+ L FTK+ + +G++ N PF
Sbjct: 408 LKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVN--CYDVFGAQSPF 465
Query: 410 GGIGESGIGSYHGKFSFDAFSHHKPVV 436
GG SG G G++ A++ K V
Sbjct: 466 GGYKMSGSGQELGEYGLQAYTEVKTVT 492
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 194/447 (43%), Gaps = 24/447 (5%)
Query: 2 NLERDLQDMREYYRSG---KTKEASWRKLQLQRLKAFLKEKERDIYRALNQ-DLGKHHVE 57
++++ ++ R ++ G + +AS R L RL A L E++R AL D GK +V
Sbjct: 58 DVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRL-ADLIERDRTYLAALETLDNGKPYVI 116
Query: 58 AFRDEIGVLQKSINFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPI 117
++ ++ ++ K + + W K + ++ EP+G+ I WNFP+
Sbjct: 117 SYLVDLDMVLKCLRY----YAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPL 172
Query: 118 GLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHL 175
+ L A+A GN VV+K +E + ++ G GP G +
Sbjct: 173 LMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAI 232
Query: 176 L-QQKWDKIFFTGSTRVGRMV-MSAAVKHLTPITLELGGKCPAIIDSLTS-SWDKEAAVK 232
+ DK+ FTGST +GR++ ++A +L +TLELGGK P II S W E A
Sbjct: 233 ASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHF 292
Query: 233 RIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNS-IARIINK 291
+ ++ GQ C A V+E VE K + NP S + +++
Sbjct: 293 ALFFNQ-----GQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDE 347
Query: 292 HHFSRLKNLLNDPMVKDS--IVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPI 349
F ++ +N + + + GG + FI+PTV D I EEIFGP++ I
Sbjct: 348 TQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQI 407
Query: 350 ITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPF 409
+ K IE+ + N+ L FTK+ + +G++ N PF
Sbjct: 408 LKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVN--CYDVFGAQSPF 465
Query: 410 GGIGESGIGSYHGKFSFDAFSHHKPVV 436
GG SG G G++ A++ K V
Sbjct: 466 GGYKMSGSGRELGEYGLQAYTEVKTVT 492
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 186/409 (45%), Gaps = 27/409 (6%)
Query: 25 RKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM--S 82
R LQ+ K + + + AL D G+ + EI SI+ E + S
Sbjct: 52 RITTLQQWKQAILSRREQLTEALVNDTGRLSITVL--EIDSFLASIDRWCGLAPELLQTS 109
Query: 83 SKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXX 142
+K +P +A+ +VP PL V +IS WNFP+ LS I A+ AG VV+KPSE
Sbjct: 110 AKNTSIPFIAL--QQSLVPYPL--VGVISPWNFPLTLSXIDTIPALLAGCAVVVKPSEIA 165
Query: 143 XXXXXXXXXXXPTYIDSKAIKV-IEGGPAVGEHLLQQKWDKIFFTGSTRVGRMVMSAAVK 201
T + + + + +EGG G +L+ D + FTGS GR V A +
Sbjct: 166 PRFVAPLLXALNTVPELRDVLIFVEGGGETGANLINYV-DFVCFTGSVATGREVAETAAR 224
Query: 202 HLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPC--AGQACIAIDYLLV-EEK 258
P LELGGK PAI+ S + E A I+ +G GQ+C++I+ + V E K
Sbjct: 225 RFIPAYLELGGKDPAIV---LESANLELATSAIL---WGAVVNTGQSCLSIERIYVAESK 278
Query: 259 FTSTLVELLKVHIKKMLGENPRKSNSIARIINKHHFSRLKNLLNDPMVKDSIVY-GGSVD 317
F +L+ + L + +I II + + + + D + K ++++ GG V+
Sbjct: 279 FEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVE 338
Query: 318 E--ANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFT 375
E + PTV + + TEE FGP+ P+ +E+++ N L F
Sbjct: 339 ELGGGWWCRPTVXTNVNHSXKVXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAVFA 398
Query: 376 KNERLQRRMVSETSSGSIVFNDAVIQFVA-----DTLPFGGIGESGIGS 419
+E ++ + ++G+I NDA + + F G+G S +G+
Sbjct: 399 GSEDEALKVARQLNAGAISINDAALTAXXHEGEKNAFNFSGLGGSRVGA 447
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 193/436 (44%), Gaps = 23/436 (5%)
Query: 14 YRSGKTKEASWRKLQLQRLKAFL--------KEKERDIYRALNQDLGKHHVEAFRDEIGV 65
Y S K + +WR L A+L ++KE+ I L++++ K + A E+
Sbjct: 46 YASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK-IGAILSKEVAKGYKSAV-SEVVR 103
Query: 66 LQKSINFALQN--LKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEP 123
+ IN+A + E + A + A + EP+GLVL IS +N+P+ L+
Sbjct: 104 TAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSK 163
Query: 124 LIGAIAAGNTVVLK-PSEXXXXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHLLQ-QKW 180
+ A+ AGN + K P++ + + I G G +G+++++ Q
Sbjct: 164 IAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAV 223
Query: 181 DKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYG 240
+ I FTGST +G + A + PI LELGGK AI+ D E K II +G
Sbjct: 224 NFINFTGSTGIGERIGKMA--GMRPIMLELGGKDSAIV---LEDADLELTAKNIIAGAFG 278
Query: 241 PCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNSIARIINKHHFSRLKNL 300
+GQ A+ +LV E LVE ++ + + NP I +I+ ++ L
Sbjct: 279 -YSGQRSTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGL 337
Query: 301 LNDPMVKDSIVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSID 360
+ND K + E NL I P + + EE FGP+LPII + +E++I+
Sbjct: 338 INDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIE 396
Query: 361 FINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSY 420
N L FT + + + G++ N+ Q D PF G +SG G
Sbjct: 397 ISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKT-QRGTDNFPFLGAKKSGAGIQ 455
Query: 421 HGKFSFDAFSHHKPVV 436
K+S +A + K VV
Sbjct: 456 GVKYSIEAMTTVKSVV 471
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 194/449 (43%), Gaps = 24/449 (5%)
Query: 2 NLERDLQDMREYYRSG---KTKEASWRKLQLQRLKAFLKEKERDIYRALNQ-DLGKHHVE 57
+++R ++ R ++ G + +AS R L RL A L E++R AL D GK ++
Sbjct: 57 DVDRAVKAARAAFQLGSPWRRMDASERGRLLNRL-ADLIERDRTYLAALETLDNGKPYII 115
Query: 58 AFRDEIGVLQKSINFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPI 117
++ ++ ++ K + + W K + ++ EP+G+ I WNFP+
Sbjct: 116 SYLVDLDMVLKCLRY----YAGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPL 171
Query: 118 GLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHL 175
+ L A+A GN VV+K +E + VI G GP G +
Sbjct: 172 LMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAI 231
Query: 176 L-QQKWDKIFFTGSTRVGRMVMSAAVK-HLTPITLELGGKCPAIIDSLTS-SWDKEAAVK 232
+ DK+ FTGST VG ++ AA K +L +TLE+GGK P II S W E A
Sbjct: 232 ASHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHF 291
Query: 233 RIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNS-IARIINK 291
+ ++ GQ C A V+E + VE K + NP S + +++
Sbjct: 292 ALFFNQ-----GQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDE 346
Query: 292 HHFSRLKNLLNDPMVKDS--IVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPI 349
F ++ + + + GG+ + FI+PTV D I EEIFGP++ I
Sbjct: 347 TQFKKVLGYIKSGKEEGLKLLCGGGAAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQI 406
Query: 350 ITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPF 409
+ K +E+ + N+ L FTK+ + +G++ N PF
Sbjct: 407 LKFKSMEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVN--CYDVFGAQSPF 464
Query: 410 GGIGESGIGSYHGKFSFDAFSHHKPVVRR 438
GG SG G G++ A++ K V R
Sbjct: 465 GGYKLSGSGRELGEYGLQAYTEVKTVTVR 493
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 193/447 (43%), Gaps = 24/447 (5%)
Query: 2 NLERDLQDMREYYRSG---KTKEASWRKLQLQRLKAFLKEKERDIYRALNQ-DLGKHHVE 57
++++ ++ R ++ G + +AS R L RL A L E++R AL D GK +V
Sbjct: 58 DVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRL-ADLIERDRTYLAALETLDNGKPYVI 116
Query: 58 AFRDEIGVLQKSINFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPI 117
++ ++ ++ K + + W K + ++ EP+G+ I WNFP+
Sbjct: 117 SYLVDLDMVLKCLRY----YAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPL 172
Query: 118 GLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHL 175
+ L A+A GN VV+K +E + ++ G GP G +
Sbjct: 173 LMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAI 232
Query: 176 L-QQKWDKIFFTGSTRVGRMV-MSAAVKHLTPITLELGGKCPAIIDSLTS-SWDKEAAVK 232
+ DK+ F GST +GR++ ++A +L +TLELGGK P II S W E A
Sbjct: 233 ASHEDVDKVAFAGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHF 292
Query: 233 RIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNS-IARIINK 291
+ ++ GQ C A V+E VE K + NP S + +++
Sbjct: 293 ALFFNQ-----GQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDE 347
Query: 292 HHFSRLKNLLNDPMVKDS--IVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPI 349
F ++ +N + + + GG + FI+PTV D I EEIFGP++ I
Sbjct: 348 TQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQI 407
Query: 350 ITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPF 409
+ K IE+ + N+ L FTK+ + +G++ N PF
Sbjct: 408 LKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVN--CYDVFGAQSPF 465
Query: 410 GGIGESGIGSYHGKFSFDAFSHHKPVV 436
GG SG G G++ A++ K V
Sbjct: 466 GGYKMSGSGRELGEYGLQAYTEVKTVT 492
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 195/447 (43%), Gaps = 24/447 (5%)
Query: 2 NLERDLQDMREYYRSG---KTKEASWRKLQLQRLKAFLKEKERDIYRALNQ-DLGKHHVE 57
++++ ++ R ++ G + +AS R L RL A L E++R AL D GK +V
Sbjct: 58 DVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRL-ADLIERDRTYLAALETLDNGKPYVI 116
Query: 58 AFRDEIGVLQKSINFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPI 117
++ ++ ++ K + + W K + ++ EP+G+ I WNFP+
Sbjct: 117 SYLVDLDMVLKCLRY----YAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPL 172
Query: 118 GLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHL 175
+ L A+A GN VV+K +E + ++ G GP G +
Sbjct: 173 LMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAI 232
Query: 176 L-QQKWDKIFFTGSTRVGRMV-MSAAVKHLTPITLELGGKCPAIIDSLTS-SWDKEAAVK 232
+ DK+ FTGST +GR++ ++A +L +TL+LGGK P II S W E A
Sbjct: 233 ASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHF 292
Query: 233 RIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNS-IARIINK 291
+ ++ GQ+C A V+E VE K + NP S + +++
Sbjct: 293 ALFFNQ-----GQSCSAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDE 347
Query: 292 HHFSRLKNLLNDPMVKDS--IVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPI 349
F ++ +N + + + GG + FI+PTV D I EEIFGP++ I
Sbjct: 348 TQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQI 407
Query: 350 ITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPF 409
+ K IE+ + N+ L FTK+ + +G++ N PF
Sbjct: 408 LKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVN--CYDVFGAQSPF 465
Query: 410 GGIGESGIGSYHGKFSFDAFSHHKPVV 436
GG SG G G++ A++ K V
Sbjct: 466 GGYKMSGSGRELGEYGLQAYTEVKTVT 492
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 157/343 (45%), Gaps = 16/343 (4%)
Query: 103 PLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPS-EXXXXXXXXXXXXXPTYIDSKA 161
P G+V+ I++WNFP+ L+ + A+ GNT+VLKP+ E +
Sbjct: 148 PRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGV 207
Query: 162 IKVIEG-GPAVGEHLLQQKWDK-IFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIID 219
+ VI G G VG+ L + K I TGST G+ + + +++TP+ LELGGK P ++
Sbjct: 208 LNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVV- 266
Query: 220 SLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENP 279
D + A + + ++ C GQ C ++ L V + +K + +P
Sbjct: 267 --MDDADLDKAAEDALWGRFANC-GQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDP 323
Query: 280 RKSNS-IARIINKHHFSRLKNLLNDPMVKDSIVYGGSVD------EANLFIEPTVLVDPP 332
++S + N+ + +++++ + + + V G E + EPTVLVD
Sbjct: 324 MDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVK 383
Query: 333 LQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGS 392
++ EE FGP+LPI+ + +E +I+F N L Y T++ + +S+ G
Sbjct: 384 QDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGE 443
Query: 393 IVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPV 435
+ N + + G +SG G GKF + + K V
Sbjct: 444 VYINRGMGE--QHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTV 484
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 191/440 (43%), Gaps = 24/440 (5%)
Query: 2 NLERDLQDMREYYRSG---KTKEASWRKLQLQRLKAFLKEKERDIYRALNQ-DLGKHHVE 57
++++ ++ R ++ G + +AS R L RL A L E++R AL D GK +V
Sbjct: 58 DVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRL-ADLIERDRTYLAALETLDNGKPYVI 116
Query: 58 AFRDEIGVLQKSINFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPI 117
++ ++ ++ K + + W K + ++ EP+G+ I WNFP+
Sbjct: 117 SYLVDLDMVLKCLRY----YAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPL 172
Query: 118 GLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHL 175
+ L A+A GN VV+K +E + ++ G GP G +
Sbjct: 173 LMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAI 232
Query: 176 L-QQKWDKIFFTGSTRVGRMV-MSAAVKHLTPITLELGGKCPAIIDSLTS-SWDKEAAVK 232
+ DK+ FTGST +GR++ ++A +L +TLELGGK P II S W E A
Sbjct: 233 ASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHF 292
Query: 233 RIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNS-IARIINK 291
+ ++ GQ C A V+E VE K + NP S + +++
Sbjct: 293 ALFFNQ-----GQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDE 347
Query: 292 HHFSRLKNLLNDPMVKDS--IVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPI 349
F ++ +N + + + GG + FI+PTV D I EEIFGP++ I
Sbjct: 348 TQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQI 407
Query: 350 ITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPF 409
+ K IE+ + N+ L FTK+ + +G++ N PF
Sbjct: 408 LKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVN--CYDVFGAQSPF 465
Query: 410 GGIGESGIGSYHGKFSFDAF 429
GG SG G G++ A+
Sbjct: 466 GGYKMSGSGRELGEYGLQAY 485
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 198/446 (44%), Gaps = 22/446 (4%)
Query: 2 NLERDLQDMREYYRSG---KTKEASWRKLQLQRLKAFLKEKERDIYRALN-QDLGKHHVE 57
++++ ++ R+ ++ G +T +AS R L +L A L E++R + + + GK
Sbjct: 59 DVDKAVKAARQAFQIGSPWRTMDASERGRLLNKL-ADLIERDRLLLATMEAMNGGKLFSN 117
Query: 58 AFRDEIGVLQKSINFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPI 117
A+ ++G K++ + W + + + + EP+G+ I WNFP+
Sbjct: 118 AYLMDLGGCIKTLRYCAG----WADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPL 173
Query: 118 GLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHL 175
+ L + A++ GNTVV+KP+E + ++ G GP G +
Sbjct: 174 LMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAI 233
Query: 176 LQQ-KWDKIFFTGSTRVGRMVMSAAVK-HLTPITLELGGKCPAIIDSLTSSWDKEAAVKR 233
DK+ FTGST VG+++ AA K +L ++LELGGK P I+ + D + AV+
Sbjct: 234 SSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIV---FADADLDNAVEF 290
Query: 234 IIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSN-SIARIINKH 292
+ GQ CIA L VEE V KK + NP S I+K
Sbjct: 291 AHQGVFYH-QGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKE 349
Query: 293 HFSRLKNLLNDPMVKDSIVY--GGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPII 350
+ ++ +L+ + + + GG FI+PTV D I EEIFGP+ I+
Sbjct: 350 QYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIM 409
Query: 351 TLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFG 410
K ++D I N+ L FT + + S SG++ N V+ PFG
Sbjct: 410 KFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVN--CYSVVSAQCPFG 467
Query: 411 GIGESGIGSYHGKFSFDAFSHHKPVV 436
G SG G G++ F ++ K V
Sbjct: 468 GFKMSGNGRELGEYGFHEYTEVKTVT 493
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 159/356 (44%), Gaps = 15/356 (4%)
Query: 103 PLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKP-SEXXXXXXXXXXXXXPTYIDSKA 161
P+G+ + IS WNF + + + + I GNTVVLKP S +
Sbjct: 172 PMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGV 231
Query: 162 IKVIEG-GPAVGEHLLQQ-KWDKIFFTGSTRVG-RMVMSAAV-----KHLTPITLELGGK 213
I + G G VG++L+ K I FTGS VG R+ AAV HL + +E+GGK
Sbjct: 232 INYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGK 291
Query: 214 CPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKK 273
++D D + A + I+VS +G +GQ C A ++ + ++E K
Sbjct: 292 DTVVVDR---DADLDLAAESILVSAFG-FSGQKCSAGSRAVIHKDVYDEVLEKTVALAKN 347
Query: 274 M-LGENPRKSNSIARIINKHHFSRLKNLLNDPMVKDSIVYGGSVDEAN-LFIEPTVLVDP 331
+ +G+ + N + +I++ F ++ + + + ++ GG D + FI+PT++ D
Sbjct: 348 LTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADL 407
Query: 332 PLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSG 391
+A IM EEIFGP++ + +++ N+ L T+N + E G
Sbjct: 408 DPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVG 467
Query: 392 SIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRSYLSEIWFR 447
++ FN + PFGG SG S G + A V Y ++F+
Sbjct: 468 NLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMYAENLYFQ 523
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 190/421 (45%), Gaps = 35/421 (8%)
Query: 25 RKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWMSSK 84
R L + A ++ ++R++ L ++GK+ VEA D + ++I+F + ++
Sbjct: 98 RSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASAD----VAEAIDFIEYYAR---AAL 150
Query: 85 KAKLPAVAVLSYA----EIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSE 140
+ + PAV V+ Y E PLG ++I+ WNFP+ + ++G +A GNTV+ KP+E
Sbjct: 151 RYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAE 210
Query: 141 XXXXXXXXXXXX-XPTYIDSKAIKVIEG-GPAVGEHLLQQKWDK-IFFTGSTRVGRMVMS 197
+ + G G VG +L++ + I FTGS VG +
Sbjct: 211 DAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYE 270
Query: 198 AAVKHLTP-------ITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAI 250
AA + L P +E GGK I+D D + A + ++VS YG GQ C A
Sbjct: 271 AAGR-LAPGQTWFKRAYVETGGKNAIIVDETA---DFDLAAEGVVVSAYG-FQGQKCSAA 325
Query: 251 DYL-LVEEKFTSTLVELLKVHIKKMLG---ENPRKSNSIARIINKHHFSRLKNLLNDPMV 306
L L + + L +LK + +G ENP + +++ ++ + +
Sbjct: 326 SRLILTQGAYEPVLERVLKRAERLSVGPAEENP----DLGPVVSAEQERKVLSYIEIGKN 381
Query: 307 KDSIVYGGS-VDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSR 365
+ +V GG ++ FI PTV + P +A I EEIFGP+L +I +K ++++ N
Sbjct: 382 EGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDT 441
Query: 366 PKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFS 425
P L +++ E G++ FN + + PFGG SG + G
Sbjct: 442 PYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALD 501
Query: 426 F 426
+
Sbjct: 502 Y 502
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 199/440 (45%), Gaps = 22/440 (5%)
Query: 2 NLERDLQDMREYYRSGK--TKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAF 59
+ ER + R + SG+ + A R +++ + +KE + R D GK E++
Sbjct: 71 DAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESY 130
Query: 60 RDEIGVLQKSINFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGL 119
D + + FA K+ + +P + ++IV EP+G+V I+ WN+P+
Sbjct: 131 ADMDDIHNVFMYFAGLADKDGGEMIDSPIPD----TESKIVKEPVGVVTQITPWNYPLLQ 186
Query: 120 SLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHLLQ 177
+ + A+A G ++V+KPSE I +I G G VG+ +
Sbjct: 187 ASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSG 246
Query: 178 QKW-DKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIV 236
K D + FTG G+ +M A ++T I LELGGK P II D E AV + +
Sbjct: 247 HKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNII---FDDADFELAVDQALN 303
Query: 237 SKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKM-LGENPRKSNSIARIINKHHFS 295
Y AGQ C A +LV+ + L +KK+ LG + +I+ H +
Sbjct: 304 GGY-FHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRN 362
Query: 296 RLKNLLNDPMVKD-SIVYGGSVDEAN-----LFIEPTVLVDPPLQAAIMTEEIFGPLLPI 349
++++ ++ + +I GG + + LF EPTV+ + I+ EE+FGP++ +
Sbjct: 363 KIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTV 422
Query: 350 ITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPF 409
+ +++I N L F+K+ +R+ ++ G++ ND F P+
Sbjct: 423 EGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFA--QAPW 480
Query: 410 GGIGESGIGSYHGKFSFDAF 429
GG +SGIG GK + +
Sbjct: 481 GGYKQSGIGRELGKEGLEEY 500
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 190/432 (43%), Gaps = 31/432 (7%)
Query: 20 KEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKE 79
+ ASW L+++ A ++E+ +I + ++ GK A E+ I++ + E
Sbjct: 67 ERASW----LRKISAGIRERASEISALIVEEGGKIQQLA-EVEVAFTADYIDY----MAE 117
Query: 80 WMSSKKAKL-----PAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTV 134
W + ++ P +L + LG+ I WNFP L + A+ GNT+
Sbjct: 118 WARRYEGEIIQSDRPGENIL----LFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTI 173
Query: 135 VLKPSEXXXXXXXXXXXXXPTYIDSKAI--KVIEGGPAVGEHLLQQ-KWDKIFFTGSTRV 191
V+KPSE + + V+ G VG+ L K + TGS
Sbjct: 174 VIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSA 233
Query: 192 GRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAID 251
G +M+ A K++T + LELGGK PAI+ D E AVK I+ S+ +GQ C +
Sbjct: 234 GEKIMATAAKNITKVCLELGGKAPAIV---MDDADLELAVKAIVDSRV-INSGQVCNCAE 289
Query: 252 YLLVEEKFTSTLVELLKVHIKKMLGENPRKSNSIAR--IINKHHFSRLKNLLNDPMVKDS 309
+ V++ V L ++ + NP + N IA +IN R++ + + + +
Sbjct: 290 RVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGA 349
Query: 310 -IVYGG-SVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPK 367
+ +GG +V+ + PT+L+D + +IM EE FGP+LP++ +ED+I N
Sbjct: 350 RVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDY 409
Query: 368 PLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFD 427
L +T+N + + + G N F A G +SGIG GK
Sbjct: 410 GLTSSIYTQNLNVAMKAIKGLKFGETYINRE--NFEAMQGFHAGWRKSGIGGADGKHGLH 467
Query: 428 AFSHHKPVVRRS 439
+ + V +S
Sbjct: 468 EYLQTQVVYLQS 479
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 190/421 (45%), Gaps = 35/421 (8%)
Query: 25 RKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWMSSK 84
R L + A ++ ++R++ L ++GK+ VEA D + ++I+F + ++
Sbjct: 98 RSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASAD----VAEAIDFIEYYAR---AAL 150
Query: 85 KAKLPAVAVLSYA----EIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSE 140
+ + PAV V+ Y E PLG ++I+ WNFP+ + ++G +A GNTV+ KP+E
Sbjct: 151 RYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAE 210
Query: 141 XXXXXXXXXXXX-XPTYIDSKAIKVIEG-GPAVGEHLLQQKWDK-IFFTGSTRVGRMVMS 197
+ + G G VG +L++ + I FTGS VG +
Sbjct: 211 DAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYE 270
Query: 198 AAVKHLTP-------ITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAI 250
AA + L P +E GGK I+D D + A + ++VS YG GQ C A
Sbjct: 271 AAGR-LAPGQTWFKRAYVETGGKDAIIVDETA---DFDLAAEGVVVSAYG-FQGQKCSAA 325
Query: 251 DYL-LVEEKFTSTLVELLKVHIKKMLG---ENPRKSNSIARIINKHHFSRLKNLLNDPMV 306
L L + + L +LK + +G ENP + +++ ++ + +
Sbjct: 326 SRLILTQGAYEPVLERVLKRAERLSVGPAEENP----DLGPVVSAEQERKVLSYIEIGKN 381
Query: 307 KDSIVYGGS-VDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSR 365
+ +V GG ++ FI PTV + P +A I EEIFGP+L +I +K ++++ N
Sbjct: 382 EGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDT 441
Query: 366 PKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFS 425
P L +++ E G++ FN + + PFGG SG + G
Sbjct: 442 PYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALD 501
Query: 426 F 426
+
Sbjct: 502 Y 502
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 193/447 (43%), Gaps = 24/447 (5%)
Query: 2 NLERDLQDMREYYRSG---KTKEASWRKLQLQRLKAFLKEKERDIYRALNQ-DLGKHHVE 57
++++ ++ R ++ G + +AS R L RL A L E++R AL D GK +V
Sbjct: 58 DVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRL-ADLIERDRTYLAALETLDNGKPYVI 116
Query: 58 AFRDEIGVLQKSINFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPI 117
++ ++ ++ K + + W K + ++ EP+G+ I WNFP+
Sbjct: 117 SYLVDLDMVLKCLRY----YAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPL 172
Query: 118 GLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHL 175
+ L A+A GN VV+K +E + ++ G GP G +
Sbjct: 173 LMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAI 232
Query: 176 L-QQKWDKIFFTGSTRVGRMV-MSAAVKHLTPITLELGGKCPAIIDSLTS-SWDKEAAVK 232
+ DK+ FTGST +GR++ ++A +L +TLELGGK P II S W E A
Sbjct: 233 ASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHF 292
Query: 233 RIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNS-IARIINK 291
+ ++ GQ A V+E VE K + NP S + +++
Sbjct: 293 ALFFNQ-----GQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDE 347
Query: 292 HHFSRLKNLLNDPMVKDS--IVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPI 349
F ++ +N + + + GG + FI+PTV D I EEIFGP++ I
Sbjct: 348 TQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQI 407
Query: 350 ITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPF 409
+ K IE+ + N+ L FTK+ + +G++ N PF
Sbjct: 408 LKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVN--CYDVFGAQSPF 465
Query: 410 GGIGESGIGSYHGKFSFDAFSHHKPVV 436
GG SG G G++ A++ K V
Sbjct: 466 GGYKMSGSGRELGEYGLQAYTEVKTVT 492
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 190/432 (43%), Gaps = 31/432 (7%)
Query: 20 KEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKE 79
+ ASW L+++ A ++E+ +I + ++ GK A E+ I++ + E
Sbjct: 67 ERASW----LRKISAGIRERASEISALIVEEGGKIQQLA-EVEVAFTADYIDY----MAE 117
Query: 80 WMSSKKAKL-----PAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTV 134
W + ++ P +L + LG+ I WNFP L + A+ GNT+
Sbjct: 118 WARRYEGEIIQSDRPGENIL----LFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTI 173
Query: 135 VLKPSEXXXXXXXXXXXXXPTYIDSKAI--KVIEGGPAVGEHLLQQ-KWDKIFFTGSTRV 191
V+KPSE + + V+ G VG+ L K + TGS
Sbjct: 174 VIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSA 233
Query: 192 GRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAID 251
G +M+ A K++T + LELGGK PAI+ D E AVK I+ S+ +GQ C +
Sbjct: 234 GEKIMATAAKNITKVXLELGGKAPAIV---MDDADLELAVKAIVDSRV-INSGQVCNCAE 289
Query: 252 YLLVEEKFTSTLVELLKVHIKKMLGENPRKSNSIAR--IINKHHFSRLKNLLNDPMVKDS 309
+ V++ V L ++ + NP + N IA +IN R++ + + + +
Sbjct: 290 RVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGA 349
Query: 310 -IVYGG-SVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPK 367
+ +GG +V+ + PT+L+D + +IM EE FGP+LP++ +ED+I N
Sbjct: 350 RVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDY 409
Query: 368 PLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFD 427
L +T+N + + + G N F A G +SGIG GK
Sbjct: 410 GLTSSIYTQNLNVAMKAIKGLKFGETYINRE--NFEAMQGFHAGWRKSGIGGADGKHGLH 467
Query: 428 AFSHHKPVVRRS 439
+ + V +S
Sbjct: 468 EYLQTQVVYLQS 479
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 193/447 (43%), Gaps = 24/447 (5%)
Query: 2 NLERDLQDMREYYRSG---KTKEASWRKLQLQRLKAFLKEKERDIYRALNQ-DLGKHHVE 57
++++ ++ R ++ G + +AS R L RL A L E++R AL D GK +V
Sbjct: 58 DVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRL-ADLIERDRTYLAALETLDNGKPYVI 116
Query: 58 AFRDEIGVLQKSINFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPI 117
++ ++ ++ K + + W K + ++ EP+G+ I WNFP+
Sbjct: 117 SYLVDLDMVLKCLRY----YAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPL 172
Query: 118 GLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHL 175
+ L A+A GN VV+K +E + ++ G GP G +
Sbjct: 173 LMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAI 232
Query: 176 L-QQKWDKIFFTGSTRVGRMV-MSAAVKHLTPITLELGGKCPAIIDSLTS-SWDKEAAVK 232
+ DK+ FTGST +GR++ ++A +L +TLELGGK P II S W E A
Sbjct: 233 ASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHF 292
Query: 233 RIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNS-IARIINK 291
+ ++ GQ A V+E VE K + NP S + +++
Sbjct: 293 ALFFNQ-----GQCXCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDE 347
Query: 292 HHFSRLKNLLNDPMVKDS--IVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPI 349
F ++ +N + + + GG + FI+PTV D I EEIFGP++ I
Sbjct: 348 TQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQI 407
Query: 350 ITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPF 409
+ K IE+ + N+ L FTK+ + +G++ N PF
Sbjct: 408 LKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVN--CYDVFGAQSPF 465
Query: 410 GGIGESGIGSYHGKFSFDAFSHHKPVV 436
GG SG G G++ A++ K V
Sbjct: 466 GGYKMSGSGRELGEYGLQAYTEVKTVT 492
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 200/460 (43%), Gaps = 36/460 (7%)
Query: 11 REYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSI 70
R+ R S R L+ + A +KEK+ ++ + + D GK EA D V+
Sbjct: 60 RKNGRDWSAASGSLRARYLRAIAAKIKEKKDELGKLESIDCGKPLEEALADLDDVVACFE 119
Query: 71 NFALQNLKEWMSSKKA---KLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGA 127
+A L E + SK+ LP SY I+ EP+G+V +I+ WN+P ++ + A
Sbjct: 120 YYA--GLAEELDSKQKAPISLPMDTFKSY--ILKEPIGVVALITPWNYPFLMATWKIAPA 175
Query: 128 IAAGNTVVLKPSEXXXXXXXXXXXXXPTY-IDSKAIKVIEG-GPAVGEHLLQQ-KWDKIF 184
+AAG +LKPSE + + ++ G G G L DKI
Sbjct: 176 LAAGCAAILKPSELASVTCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKIS 235
Query: 185 FTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAG 244
FTGS+ G +M+ A + + P++LELGGK P ++ D + + + + G
Sbjct: 236 FTGSSATGSKIMTTAAQLVKPVSLELGGKSPIVV---FEDVDLDKVAEWTVFGCFF-TNG 291
Query: 245 QACIAIDYLLVEEKFTSTLVELL-----KVHIKKMLGENPRKSNSIARIINKHHFSRLKN 299
Q C A L+V E V+ L + I L E R + I+++ + ++ N
Sbjct: 292 QICSATSRLIVHESIAVEFVDKLVKWAENIKISDPLEEGCR----LGPIVSEAQYKKVLN 347
Query: 300 LLNDPMVKDSIVYGGSVDEANL----FIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRI 355
++ + + + G +L F+EPT++ D I EE+FGP+L + T
Sbjct: 348 CISSAKSEGATILTGGRRPEHLKKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTE 407
Query: 356 EDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGES 415
E++I+ N L + + R+ +G + N A F+ P+GGI S
Sbjct: 408 EEAINLANDTHYGLGSAVMSNDLERCERLSKALQAGIVWINCAQPSFI--QAPWGGIKRS 465
Query: 416 GIGSYHGKFSFDAFSHHKPVVRRSYLSEIWFRFPPWNNYK 455
G G G++ + + K V R Y S+ PW Y+
Sbjct: 466 GFGRELGEWGLENYLSVKQVTR--YTSD-----EPWGWYQ 498
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 190/440 (43%), Gaps = 24/440 (5%)
Query: 2 NLERDLQDMREYYRSG---KTKEASWRKLQLQRLKAFLKEKERDIYRALNQ-DLGKHHVE 57
++++ ++ R ++ G + +AS R L RL A L E++R AL D GK +V
Sbjct: 58 DVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRL-ADLIERDRTYLAALETLDNGKPYVI 116
Query: 58 AFRDEIGVLQKSINFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPI 117
++ ++ ++ K + + W K + ++ EP+G+ I WNFP+
Sbjct: 117 SYLVDLDMVLKCLRY----YAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPL 172
Query: 118 GLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHL 175
+ L A+A GN VV+K +E + ++ G GP G +
Sbjct: 173 LMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAI 232
Query: 176 L-QQKWDKIFFTGSTRVGRMV-MSAAVKHLTPITLELGGKCPAIIDSLTS-SWDKEAAVK 232
+ DK+ FTGST +GR++ ++A +L +TLELGGK P II S W E A
Sbjct: 233 ASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHF 292
Query: 233 RIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNS-IARIINK 291
+ ++ GQ A V+E VE K + NP S + +++
Sbjct: 293 ALFFNQ-----GQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDE 347
Query: 292 HHFSRLKNLLNDPMVKDS--IVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPI 349
F ++ +N + + + GG + FI+PTV D I EEIFGP++ I
Sbjct: 348 TQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQI 407
Query: 350 ITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPF 409
+ K IE+ + N+ L FTK+ + +G++ N PF
Sbjct: 408 LKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVN--CYDVFGAQSPF 465
Query: 410 GGIGESGIGSYHGKFSFDAF 429
GG SG G G++ A+
Sbjct: 466 GGYKMSGSGRELGEYGLQAY 485
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 188/420 (44%), Gaps = 33/420 (7%)
Query: 25 RKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWMSSK 84
R L + A ++ ++R++ L ++GK+ VEA D + ++I+F + ++
Sbjct: 98 RSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASAD----VAEAIDFIEYYAR---AAL 150
Query: 85 KAKLPAVAVLSYA----EIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSE 140
+ + PAV V+ Y E PLG ++I+ WNFP+ + ++G +A GNTV+ KP+E
Sbjct: 151 RYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAE 210
Query: 141 XXXXXXXXXXXX-XPTYIDSKAIKVIEG-GPAVGEHLLQQKWDK-IFFTGSTRVGRMVMS 197
+ + G G VG +L++ + I FTGS VG +
Sbjct: 211 DAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYE 270
Query: 198 AAVKHLTP-------ITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAI 250
AA + L P +E GGK I+D D + A + ++VS YG + A
Sbjct: 271 AAGR-LAPGQTWFKRAYVETGGKDAIIVDETA---DFDLAAEGVVVSAYGFQGQKXSAAS 326
Query: 251 DYLLVEEKFTSTLVELLKVHIKKMLG---ENPRKSNSIARIINKHHFSRLKNLLNDPMVK 307
+L + + L +LK + +G ENP + +++ ++ + + +
Sbjct: 327 RLILTQGAYEPVLERVLKRAERLSVGPAEENP----DLGPVVSAEQERKVLSYIEIGKNE 382
Query: 308 DSIVYGGS-VDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRP 366
+V GG ++ FI PTV + P +A I EEIFGP+L +I +K ++++ N P
Sbjct: 383 GQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTP 442
Query: 367 KPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSF 426
L +++ E G++ FN + + PFGG SG + G +
Sbjct: 443 YGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDY 502
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 193/435 (44%), Gaps = 37/435 (8%)
Query: 24 WRKLQLQRLKAFLK-------EKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQN 76
WR++ + + L+ + + D+ R + + GK EA G + S F
Sbjct: 64 WREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH----GEILYSAFFL--- 116
Query: 77 LKEWMSSKKAKLPAVAVLSYAE-----IVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAG 131
EW S + ++ + + A+ ++ +P+G+ +I+ WNFP + + A+AAG
Sbjct: 117 --EWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAG 174
Query: 132 NTVVLKPSEXX-XXXXXXXXXXXPTYIDSKAIKVI----EGGPAVGEHLLQQKW-DKIFF 185
TVV+KP+E I S VI + VGE + KI F
Sbjct: 175 CTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISF 234
Query: 186 TGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQ 245
TGST G++++ A + +++ELGG P I+ S + + AV + SK+ GQ
Sbjct: 235 TGSTTTGKILLHHAANSVKRVSMELGGLAPFIV---FDSANVDQAVAGAMASKFRN-TGQ 290
Query: 246 ACIAIDYLLVEEKFTSTLVELLKVHIKKML--GENPRKSNSIARIINKHHFSRLKNLLND 303
C+ + LV+ V+ +KK L G + + +IN+ +++ +ND
Sbjct: 291 TCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVND 350
Query: 304 PMVKD-SIVYGGSVDE-ANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDF 361
+ K ++V GG + F EPT+L + EE FGPL P+I E++I
Sbjct: 351 AVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAI 410
Query: 362 INSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYH 421
N+ L Y ++++ R+ + G + N+ +I V PFGG+ +SG+G
Sbjct: 411 ANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSV--ECPFGGVKQSGLGREG 468
Query: 422 GKFSFDAFSHHKPVV 436
K+ D + K V
Sbjct: 469 SKYGIDEYLELKYVC 483
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 169/363 (46%), Gaps = 13/363 (3%)
Query: 99 IVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXXXXXXXXXXX-XXPTYI 157
++ EPLG+V +I+ WN+P+ +++ + A+AAG +LKPSE +
Sbjct: 160 VLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGL 219
Query: 158 DSKAIKVIEG-GPAVGEHLLQQKW-DKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCP 215
S A+ ++ G GP G L DKI FTGS G +M+AA + + P++LELGGK P
Sbjct: 220 PSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSLELGGKSP 279
Query: 216 AIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKML 275
++ + D A + + + GQ C A L+V+E S ++ L K +
Sbjct: 280 IVVFDDIDNLD--IAAEWTLFGIFAN-TGQVCSATSRLIVQENIASAFMDRLLKWTKNIK 336
Query: 276 GENPRKSNS-IARIINKHHFSR-LKNLLNDPMVKDSIVYGGSVDE---ANLFIEPTVLVD 330
+P + + + +++ + + LK + N +I+ GG + +++PT++ D
Sbjct: 337 ISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITD 396
Query: 331 PPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSS 390
I EE+FGP+L + T K E +I+ N L +K+ + R +
Sbjct: 397 VNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQT 456
Query: 391 GSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRSYLSEIWFRFPP 450
G I N + F + LP+GG SG G GK+ + F + K V + + F P
Sbjct: 457 GIIWINCSQPTF--NELPWGGKKRSGFGRDLGKWGLENFLNIKQVTEYTSAEPLAFYKSP 514
Query: 451 WNN 453
N
Sbjct: 515 SKN 517
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 205/446 (45%), Gaps = 24/446 (5%)
Query: 19 TKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLK 78
T + R L+ + A + EK+ ++ + + D GK EA D V +A +L
Sbjct: 68 TASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYA--DLA 125
Query: 79 EWMSSKKAKLPAVAVLSY-AEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLK 137
E + +++ ++ + ++ + ++ EP+G+V +I+ WN+P+ ++ + A+AAG +LK
Sbjct: 126 EKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILK 185
Query: 138 PSEXXXXXXXXXXXXXPTY-IDSKAIKVIEG-GPAVGEHLLQQ-KWDKIFFTGSTRVGRM 194
PSE + + ++ G GP G L DK+ FTGS+ G
Sbjct: 186 PSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSK 245
Query: 195 VMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLL 254
+M+AA + + P++LELGGK P ++ D + A + I + GQ C A L+
Sbjct: 246 IMTAAAQLVKPVSLELGGKSPLVV---FEDVDLDKAAEWAIFGCFW-TNGQICSATSRLI 301
Query: 255 VEEKFTSTLVELLKVHIKKMLGENPRKSNS-IARIINKHHFSR-LKNLLNDPMVKDSIVY 312
+ E + + + IK + +P + + ++++ + + LK + N +I+
Sbjct: 302 LHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILT 361
Query: 313 GGSVDE---ANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPL 369
GGS E FIEPT++ D I EE+FGP+L + T E++ID N L
Sbjct: 362 GGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGL 421
Query: 370 VIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAF 429
+ + R+ +G + N + F P+GG+ SG G G++ D +
Sbjct: 422 GAAVISNDLERCERVTKAFKAGIVWVNCSQPCFT--QAPWGGVKRSGFGRELGEWGLDNY 479
Query: 430 SHHKPVVRRSYLSEIWFRFPPWNNYK 455
K V + Y+SE PW Y+
Sbjct: 480 LSVKQVTQ--YISE-----EPWGWYQ 498
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 188/432 (43%), Gaps = 31/432 (7%)
Query: 20 KEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKE 79
+ ASW L+++ A ++E+ +I + ++ GK A E+ I++ + E
Sbjct: 67 ERASW----LRKISAGIRERATEISALIVEEGGKIQQLA-EVEVAFTADYIDY----MAE 117
Query: 80 WMSSKKAKL-----PAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTV 134
W + ++ P +L + LG+ I WNFP L + A+ GNT+
Sbjct: 118 WARRYEGEIIQSDRPGENILLF----KRALGVTTGILPWNFPFFLIARKMAPALLTGNTI 173
Query: 135 VLKPSEXXXXXXXXXXXXXPTYIDSKAI--KVIEGGPAVGEHLLQQ-KWDKIFFTGSTRV 191
V+KPSE + + V+ G VG+ L K + TGS
Sbjct: 174 VIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSA 233
Query: 192 GRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAID 251
G +M+ A K++T + LELGGK PAI+ D E AVK I+ S+ +GQ C +
Sbjct: 234 GEKIMATAAKNITKVCLELGGKAPAIV---MDDADLELAVKAIVDSRV-INSGQVCNCAE 289
Query: 252 YLLVEEKFTSTLVELLKVHIKKMLGENPRKSNSIAR--IINKHHFSRLKNLLNDPMVKDS 309
+ V++ V L ++ + NP + N IA +IN R++ + + + +
Sbjct: 290 RVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGA 349
Query: 310 IVY--GGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPK 367
V G +V+ + PT+L+D + +IM EE FGP+LP++ +E++I N
Sbjct: 350 RVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDY 409
Query: 368 PLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFD 427
L +T+N + + + G N F A G +SGIG GK
Sbjct: 410 GLTSSIYTQNLNVAMKAIKGLKFGETYINRE--NFEAMQGFHAGWRKSGIGGADGKHGLH 467
Query: 428 AFSHHKPVVRRS 439
+ + V +S
Sbjct: 468 EYLQTQVVYLQS 479
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 152/339 (44%), Gaps = 10/339 (2%)
Query: 99 IVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYI 157
++ +P+G+ I+ WNFP + A+AAG T++++P++ I
Sbjct: 164 VIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGI 223
Query: 158 DSKAIKVIEG-GPAVGEHLLQQKW-DKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCP 215
+ ++++ G +G L K+ FTGST VGR++M+ + I+LELGG P
Sbjct: 224 PAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAP 283
Query: 216 AIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKM- 274
I+ +AAV +VSKY AGQ C+ + + V+ E L +K++
Sbjct: 284 FIVFDDADL---DAAVDGAMVSKY-RNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELK 339
Query: 275 LGENPRKSNSIARIINKHHFSRLKNLLNDPMVKDSIVYGGSVDEANLFIEPTVLVDPPLQ 334
+G I +I + +++K + D + K + + G + LF EP +L
Sbjct: 340 VGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGLFFEPGILTGVTSD 399
Query: 335 AAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIV 394
+ EE FGPL P+ E+ I N L Y +T+N R+ G +
Sbjct: 400 MLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVG 459
Query: 395 FNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHK 433
N +I + PFGG+ +SG+G K+ + + K
Sbjct: 460 HNTGLIS--NEVAPFGGVKQSGLGREGSKYGIEEYLETK 496
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 158/346 (45%), Gaps = 21/346 (6%)
Query: 102 EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSK 160
EP+G+ I WNFP+ + + A+ GNTVV+KP+E
Sbjct: 156 EPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPG 215
Query: 161 AIKVIEG-GPAVGEHLLQQ-KWDKIFFTGSTRVGRMVMSAAVK-HLTPITLELGGKCPAI 217
+ ++ G GP G + DKI FTGST VG+++ AA + +L +TLELGGK P I
Sbjct: 216 VVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNI 275
Query: 218 IDSLTS-SWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEE----KFTSTLVELLKVHIK 272
I + + E A + + ++ GQ C A + VEE +F VE K +
Sbjct: 276 IFADADLDYAVEQAHQGVFFNQ-----GQCCTAGSRIFVEESIYEEFVKRSVERAK---R 327
Query: 273 KMLGENPRKSNSIARIINKHHFSRLKNLLNDPMVKDSIVYGGS--VDEANLFIEPTVLVD 330
+++G + I+K ++++ L+ + + + + G + FIEPTV +
Sbjct: 328 RIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSN 387
Query: 331 PPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSS 390
I EEIFGP+ I+ K +++ I+ N+ LV FT N+ + MVS
Sbjct: 388 VTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFT-NDINKALMVSSAMQ 446
Query: 391 GSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVV 436
V+ + A + PFGG SG G G+F +S K V
Sbjct: 447 AGTVWINCYNALNAQS-PFGGFKMSGNGREMGEFGLREYSEVKTVT 491
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 185/430 (43%), Gaps = 18/430 (4%)
Query: 25 RKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWMSSK 84
R+ L+ ++ LKE +I R L + GK EA + E+ ++ +++ S
Sbjct: 73 RRKWLEDIRDGLKENREEIGRILCXEHGKPWKEA-QGEVDYAAGFFDYCAKHISALDSHT 131
Query: 85 KAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKP-SEXXX 143
+ P + + P+G+ +I WNFPIG + L A+AAG V+KP SE
Sbjct: 132 IPEKPKDCTWT---VHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASETPL 188
Query: 144 XXXXXXXXXXPTYIDSKAIKVIEGGPAVGEHLLQQKWD--KIFFTGSTRVGRMVMSAAVK 201
+ + ++ G +V +L + D + FTGST VGR ++ +
Sbjct: 189 TXIAFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDTAE 248
Query: 202 HLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTS 261
+ + LELGG P I+ EAA +I +K+ GQ C+ + + V EK
Sbjct: 249 QVKKLALELGGNAPFIVFDDADL---EAAADNLIANKF-RGGGQTCVCANRIFVHEKVAD 304
Query: 262 TLVELLKVHIKK-MLGENPRKSNSIARIINKHHFSRLKNLLNDPMVKD-SIVYGGSVDE- 318
+ L + K +G+ I +INK F ++K L D + K S+V G E
Sbjct: 305 AFGQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAEL 364
Query: 319 -ANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKN 377
LF PTV+ + EE FGPL+P + E+ ID N L Y FT +
Sbjct: 365 GDGLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTAD 424
Query: 378 ERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVR 437
+R+ + G + +N PFGG SGIG G F + V
Sbjct: 425 AERAQRVAAGLRFGHVGWNTGTGP--TPEAPFGGXKASGIGREGGLEGLFEFVEAQ-TVP 481
Query: 438 RSYLSEIWFR 447
R + ++F+
Sbjct: 482 RGFAENLYFQ 491
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 167/360 (46%), Gaps = 13/360 (3%)
Query: 99 IVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXXX-XXXXXXXXXXPTYI 157
++ EPLG+V +I+ WN+P+ +++ + A+AAG +LKPSE +
Sbjct: 160 VLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGL 219
Query: 158 DSKAIKVIEG-GPAVGEHLLQQKW-DKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCP 215
S A+ ++ G GP G L DKI FTGS G +M+AA + + P++L LGGK P
Sbjct: 220 PSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSLALGGKSP 279
Query: 216 AIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKML 275
++ + D A + + + GQ C A L+V+E S ++ L K +
Sbjct: 280 IVVFDDIDNLD--IAAEWTLFGIFAN-TGQVCSATSRLIVQENIASAFMDRLLKWTKNIK 336
Query: 276 GENPRKSNS-IARIINKHHFSR-LKNLLNDPMVKDSIVYGGSVDE---ANLFIEPTVLVD 330
+P + + + +++ + + LK + N +I+ GG + +++PT++ D
Sbjct: 337 ISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITD 396
Query: 331 PPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSS 390
I EE+FGP+L + T K E +I+ N L +K+ + R +
Sbjct: 397 VNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQT 456
Query: 391 GSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRSYLSEIWFRFPP 450
G I N + F + LP+GG SG G GK+ + F + K V + + F P
Sbjct: 457 GIIWINCSQPTF--NELPWGGKKRSGFGRDLGKWGLENFLNIKQVTEYTSAEPLAFYKSP 514
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 190/428 (44%), Gaps = 37/428 (8%)
Query: 24 WRKLQLQRLKAFLK-------EKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQN 76
WR++ + + L+ + + D+ R + + GK EA G + S F
Sbjct: 64 WREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH----GEILYSAFFL--- 116
Query: 77 LKEWMSSKKAKLPAVAVLSYAE-----IVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAG 131
EW S + ++ + + A+ ++ +P+G+ +I+ WNFP + + A+AAG
Sbjct: 117 --EWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAG 174
Query: 132 NTVVLKPSEXX-XXXXXXXXXXXPTYIDSKAIKVI----EGGPAVGEHLLQQKW-DKIFF 185
TVV+KP+E I S VI + VGE + KI F
Sbjct: 175 CTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISF 234
Query: 186 TGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQ 245
TGST G++++ A + +++ELGG P I+ S + + AV + SK+ GQ
Sbjct: 235 TGSTTTGKILLHHAANSVKRVSMELGGLAPFIV---FDSANVDQAVAGAMASKFRN-TGQ 290
Query: 246 ACIAIDYLLVEEKFTSTLVELLKVHIKKML--GENPRKSNSIARIINKHHFSRLKNLLND 303
+ + LV+ V+ +KK L G + + +IN+ +++ +ND
Sbjct: 291 TAVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVND 350
Query: 304 PMVKD-SIVYGGSVDE-ANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDF 361
+ K ++V GG + F EPT+L + EE FGPL P+I E++I
Sbjct: 351 AVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAI 410
Query: 362 INSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYH 421
N+ L Y ++++ R+ + G + N+ +I V PFGG+ +SG+G
Sbjct: 411 ANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSV--ECPFGGVKQSGLGREG 468
Query: 422 GKFSFDAF 429
K+ D +
Sbjct: 469 SKYGIDEY 476
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 15/340 (4%)
Query: 102 EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXXXXXXXXXXXXXPTYIDSKA 161
EPLG+VL IS +N+P+ L+ + A+ GNTVV KP+ D+ A
Sbjct: 151 EPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPA---TQGSLSGIKMVEALADAGA 207
Query: 162 ----IKVIEG-GPAVGEHLLQQKWDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPA 216
I+V+ G G +G+HL++ + +S K + P+ LELGGK PA
Sbjct: 208 PEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK-MIPVVLELGGKDPA 266
Query: 217 IIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLG 276
I+ D + +I+ + +GQ C AI + V++ LV +K ++++
Sbjct: 267 IV---LDDADLKLTASQIVSGAFS-YSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTV 322
Query: 277 ENPRKSNSIARIINKHHFSRLKNLLNDPMVKDSIVYGGSVDEANLFIEPTVLVDPPLQAA 336
+P I +I++ + ++ L++D + + + G+ + NL + PT+L D
Sbjct: 323 GSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNL-LSPTLLDDVTPAMR 381
Query: 337 IMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFN 396
+ EE FGP+LPII +K ++I N L FTK+ + G++ N
Sbjct: 382 VAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHIN 441
Query: 397 DAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVV 436
A + D PF G+ +SG+G K S + + + V
Sbjct: 442 -AKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTV 480
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 198/448 (44%), Gaps = 22/448 (4%)
Query: 2 NLERDLQDMREYYRSG---KTKEASWRKLQLQRLKAFLKEKERDIYRALNQ-DLGKHHVE 57
++++ ++ RE ++ G +T +AS R + +L A L E++R + L + GK
Sbjct: 59 DVDKAVKAAREAFQMGSPWRTMDASERGQLIYKL-ADLIERDRLLLATLESINAGKVFAS 117
Query: 58 AFRDEIGVLQKSINFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPI 117
A+ ++ K AL+ W + + V ++ EP+G+ +I WN P+
Sbjct: 118 AYLMDLDYCIK----ALRYCAGWADKIQGRTIPVDGEFFSYTRHEPIGVCGLIFPWNAPM 173
Query: 118 GLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHL 175
L + A+ GNTV++KP+E + ++ G GP G +
Sbjct: 174 ILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAI 233
Query: 176 LQQ-KWDKIFFTGSTRVGRMVMSAAVK-HLTPITLELGGKCPAIIDSLTSSWDKEAAVKR 233
DK+ FTGST VG+M+ AA K +L +TLELG K P I+ + D ++AV+
Sbjct: 234 SSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIV---FADADLDSAVEF 290
Query: 234 IIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSN-SIARIINKH 292
+ GQ+CIA L VEE V+ KK + NP + INK
Sbjct: 291 AHQGVFTN-QGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKA 349
Query: 293 HFSRLKNLLNDPMVKDSIVY--GGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPII 350
+++ L+ + + + GG FI+PTV + I EEIFGP+ I+
Sbjct: 350 QHNKIMELIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIM 409
Query: 351 TLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFG 410
K +++ I N+ LV FTK+ + S +G++ N + + P G
Sbjct: 410 KFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWVNCYLA--ASAQSPAG 467
Query: 411 GIGESGIGSYHGKFSFDAFSHHKPVVRR 438
G SG G G++ ++ K V +
Sbjct: 468 GFKMSGHGREMGEYGIHEYTEVKTVTMK 495
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 154/343 (44%), Gaps = 16/343 (4%)
Query: 102 EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPS-EXXXXXXXXXXXXXPTYIDSK 160
EP+G+V I +WN P+ L++ + A+ AG T+VLKP+ E +
Sbjct: 145 EPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEG 204
Query: 161 AIKVIEGGPAVGEHLLQQ-KWDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIID 219
+ V+ GG G+ L D FTGS+ VGR V A + L P TLELGGK AII
Sbjct: 205 VLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAII- 263
Query: 220 SLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKM-LGEN 278
D AA+ ++ S AGQ C+ +L +V + + + +G
Sbjct: 264 --LEDVDLAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPP 320
Query: 279 PRKSNSIARIINKHHFSRLKNLLNDPMVKDS-IVYGGSVDEA---NLFIEPTVLVDPPLQ 334
+ I +I++ +R++ + + + + +V GG E FI+PTV D +
Sbjct: 321 SDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNK 380
Query: 335 AAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIV 394
I EEIFGP+L II ED+I N L +T + ++ + +G+
Sbjct: 381 MTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYG 440
Query: 395 FNDAVIQFVAD-TLPFGGIGESGIGSYHGKFSFDAFSHHKPVV 436
N + D PFGG SGIG +G + F+ K V+
Sbjct: 441 IN----WYAFDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVL 479
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 159/344 (46%), Gaps = 20/344 (5%)
Query: 102 EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXXXXXXXXXXXXXPTYIDSKA 161
EP+G+V I+ +NFP+ LS + AIA GN +V PS +
Sbjct: 129 EPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYN 188
Query: 162 I-----KVIEG-GPAVGEHL-LQQKWDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKC 214
+ ++ G G VG+ + + +K + I FTGS++VG ++ A I LELGG
Sbjct: 189 VPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKA--GFKKIALELGGVN 246
Query: 215 PAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKM 274
P I+ D AV +I + AGQ CI++ +LV+E +E+ K +
Sbjct: 247 PNIV---LKDADLNKAVNALIKGSF-IYAGQVCISVGMILVDESIADKFIEMFVNKAKVL 302
Query: 275 LGENP-RKSNSIARIINKHHFSRLKNLLNDPMVKDS-IVYGGSVDEANLFIEPTVLVDPP 332
NP + + +I+ H ++ ++ + + ++ GG D+A + PT+L +
Sbjct: 303 NVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKALFY--PTIL-EVD 359
Query: 333 LQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGS 392
+ E F P++PII E+ ID NS L FT + + G
Sbjct: 360 RDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGG 418
Query: 393 IVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVV 436
+V ND+ + F D +PFGG+ +SG+G K++ + S+ K ++
Sbjct: 419 VVINDSSL-FRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTII 461
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 170/417 (40%), Gaps = 29/417 (6%)
Query: 30 QRLKAFLK-----EKERDIYRALNQ-DLGKHHVEAFRDEIGVLQKSINF---ALQNLKEW 80
+R A LK EKE D + AL + GK DE+ + F A++NL
Sbjct: 85 ERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAP 144
Query: 81 MSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSE 140
+ + LP + I +P+G+V I+ WN+P+ L AI GNTVV KPSE
Sbjct: 145 AAGEY--LPG----HTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSE 198
Query: 141 XXXXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHLLQQ-KWDKIFFTGSTRVGRMVMSA 198
+ + VI G G VG L+ K + TG G+ V++A
Sbjct: 199 QTPLTALKLARLIADILPEGVVNVITGRGETVGNALINHPKVGXVSITGDIATGKKVLAA 258
Query: 199 AVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEK 258
A K + LELGGK P I+ D EA V I Y AGQ C A + E
Sbjct: 259 AAKTVKRTHLELGGKAPVIV---YGDADLEAVVNGIRTFGY-YNAGQDCTAACRIYAEAG 314
Query: 259 FTSTLVELLKVHIKKM-LGENPRKSNSIARIINKHHFSRLKNLLNDPMVKD--SIVYGGS 315
LV L + + + N I +I++ R+ + + + I GG
Sbjct: 315 IYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGR 374
Query: 316 V-DEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAF 374
+ F +PTV+ + I+ E+FGP++ + +D++ + N L +
Sbjct: 375 TGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVW 434
Query: 375 TKNERLQRRMVSETSSGSIVFNDAVIQF-VADTLPFGGIGESGIGSYHGKFSFDAFS 430
TK+ R S G N F + + P GGI +SG G ++ + ++
Sbjct: 435 TKDISKAXRAASRLQYGCTWIN---THFXLTNEXPHGGIKQSGYGKDXSVYALEDYT 488
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 197/449 (43%), Gaps = 33/449 (7%)
Query: 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRD 61
+ ++ + ++ +++ KT R ++++ +++ D+ + ++ ++G A
Sbjct: 64 DADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNA 123
Query: 62 EIGVLQKSINFALQNLKEWMSSKKAKLPA--VAVLSYAEIVPEPLGLVLIISSWNFPIGL 119
+ I ++ KE+ S ++A + A+L Y + +G+V +I+ WN+P+
Sbjct: 124 QTATGSSHIRNFIKAYKEF-SFQEALIEGNEQAILHY-----DAIGVVGLITPWNWPMNQ 177
Query: 120 SLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHL-L 176
+I A+ AG T+VLKPSE + S +I G G VG +L
Sbjct: 178 VTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSA 237
Query: 177 QQKWDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIV 236
+ I FTGSTR G+ + A L + LELGGK II + D +A + +
Sbjct: 238 HPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANII---FADADIDALQRGVRH 294
Query: 237 SKYGPCAGQACIAIDYLLVEEKFTSTLVELLK-VHIKKMLGENPRKSNSIARIINKHHFS 295
Y +GQ+C A +LVE+ ++ K + K +G + N I +++K +
Sbjct: 295 CFYN--SGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYD 352
Query: 296 RLKNLLNDPMVKDSIVYGGSVD-----EANLFIEPTVLVDPPLQAAIMTEEIFGPLLPII 350
++++L+ + + + + G E ++ PTV D I EEIFGP+L ++
Sbjct: 353 KIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLL 412
Query: 351 TLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLP-- 408
++++ N L Y +++ RR+ ++ SG + N LP
Sbjct: 413 PFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVN-------GHELPGG 465
Query: 409 --FGGIGESGIGSYHGKFSFDAFSHHKPV 435
FGG+ SG G + F K +
Sbjct: 466 SYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 163/351 (46%), Gaps = 29/351 (8%)
Query: 102 EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSK 160
EP+G+ I+ WN+P+ + +AAGNTVV+KP++ I
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 161 AIKVIEG-GPAVGEHLLQQ-KWDKIFFTGSTRVGRMVM-SAAVKHLTPITLELGGKCPAI 217
+ ++ G G VG+ L KI FTGST VG+ +M S A+ ++ ++LELGGK P I
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 218 IDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGE 277
I + D AV+ + S + G+ CIA L VEE + V+ + ++KM
Sbjct: 297 I---FADCDLNKAVQMGMSSVFFN-KGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352
Query: 278 NP--RKSNSIARIINKHHFSRLKNLLN--DPMVKD--SIVYGGS-VDEANLFIEPTVLVD 330
NP R +N ++H + L+ L+ VK+ ++V GG+ V F +PTV D
Sbjct: 353 NPLERDTNHGP----QNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTD 408
Query: 331 PPLQAAIMTEEIFGPLLPIITLKRIEDS-IDFINSRPKP----LVIYAFTKNERLQRRMV 385
I EE FG PI+ + R D +D + SR L FT++ +
Sbjct: 409 VEDHMYIAKEESFG---PIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVS 465
Query: 386 SETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVV 436
+ +G++ N VA PFGG +SG G G+ + + + K V
Sbjct: 466 DKLQAGTVFINTYNKTDVA--APFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 149/350 (42%), Gaps = 25/350 (7%)
Query: 103 PLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSE-XXXXXXXXXXXXXPTYIDSKA 161
P G V II+ WN P+ LS + A+A GNTVVLKP+E +
Sbjct: 162 PAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGV 221
Query: 162 IKVIEG-GPAVGEHLLQQKWDKIF-FTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIID 219
+++G G G L+ + TG T G++VM A HL ++ ELGGK PA++
Sbjct: 222 FNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALV- 280
Query: 220 SLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKM-LGEN 278
+ D E A+ ++ + G+ C A LLVEEK V + + + +G
Sbjct: 281 --FADADLERALDAVVFQIFS-FNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHP 337
Query: 279 PRKSNSIARIINKHHFSRL------------KNLLNDPMVKDSIVYGGSVDEANLFIEPT 326
+ +I+ H R+ + L+ K S G + N + PT
Sbjct: 338 LDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSF-RGEDLSRGNYLL-PT 395
Query: 327 VLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVS 386
V V I EEIFGP+L I K E+++ N L Y FT++ R+
Sbjct: 396 VFVGEN-HMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLAL 454
Query: 387 ETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVV 436
E +G + N ++ + PFGG+ SG G ++ D ++ K +
Sbjct: 455 ELEAGMVYLNSHNVRHL--PTPFGGVKGSGDRREGGTYALDFYTDLKTIA 502
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 190/447 (42%), Gaps = 29/447 (6%)
Query: 8 QDMREYYRSGKTKEASWRKLQ-LQRLKAFL------KEKERDIYRALNQDLGKHHVEAFR 60
+++ + +S + W K+ ++R + L +E+ +I + + GK EA
Sbjct: 58 EEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEY 117
Query: 61 DEIGVLQKSINFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLS 120
D I + I + L +S + +LP A +A EPLG+ I +WN+P ++
Sbjct: 118 D-IDAAWQCIEY-YAGLAPTLSGQHIQLPGGA---FAYTRREPLGVCAGILAWNYPFMIA 172
Query: 121 LEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSKAIKVIEGGPAVGEHLLQQ- 178
A+A GN VV KPS + + V++GG G L
Sbjct: 173 AWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHP 232
Query: 179 KWDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSK 238
K+ FTGS G+ VM + K + +TLELGGK P +I + E AV+ +++
Sbjct: 233 NVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLI---FKDCELENAVRGALMAN 289
Query: 239 YGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNS-IARIINKHHFSRL 297
+ GQ C + V+ + +E + K ++ +P + + + +I+K ++
Sbjct: 290 F-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKV 348
Query: 298 KNLLNDPMVKDSIVYGGSVD--------EANLFIEPTVLVDPPLQAAIMTEEIFGPLLPI 349
+ + + V G + F+ P VL + + EEIFGP++ +
Sbjct: 349 LGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSV 408
Query: 350 ITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPF 409
+ E+ + N+ L FT++ R+ + +G+ N I V +PF
Sbjct: 409 LPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPV--EVPF 466
Query: 410 GGIGESGIGSYHGKFSFDAFSHHKPVV 436
GG SG G +G+ + D +S K V+
Sbjct: 467 GGYKMSGFGRENGQATVDYYSQLKTVI 493
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 163/351 (46%), Gaps = 29/351 (8%)
Query: 102 EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSK 160
EP+G+ I+ WN+P+ + +AAGNTVV+KP++ I
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 161 AIKVIEG-GPAVGEHLLQQ-KWDKIFFTGSTRVGRMVM-SAAVKHLTPITLELGGKCPAI 217
+ ++ G G VG+ L KI FTGST VG+ +M S A+ ++ ++L+LGGK P I
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLQLGGKSPLI 296
Query: 218 IDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGE 277
I + D AV+ + S + G+ CIA L VEE + V+ + ++KM
Sbjct: 297 I---FADCDLNKAVQMGMSSVFFN-KGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352
Query: 278 NP--RKSNSIARIINKHHFSRLKNLLN--DPMVKD--SIVYGGS-VDEANLFIEPTVLVD 330
NP R +N ++H + L+ L+ VK+ ++V GG+ V F +PTV D
Sbjct: 353 NPLERDTNHGP----QNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTD 408
Query: 331 PPLQAAIMTEEIFGPLLPIITLKRIEDS-IDFINSRPKP----LVIYAFTKNERLQRRMV 385
I EE FG PI+ + R D +D + SR L FT++ +
Sbjct: 409 VEDHMYIAKEESFG---PIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVS 465
Query: 386 SETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVV 436
+ +G++ N VA PFGG +SG G G+ + + + K V
Sbjct: 466 DKLQAGTVFINTYNKTDVA--APFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 158/359 (44%), Gaps = 20/359 (5%)
Query: 103 PLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSKA 161
PLG+ + I +WN+P ++ A+ AGN +V KPSE +
Sbjct: 150 PLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGL 209
Query: 162 IKVIEGGPAVGEHLLQQ-KWDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDS 220
VI+G G L+ K+ TGS GR V +AA HL +T+ELGGK P I+
Sbjct: 210 FNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIV-- 267
Query: 221 LTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKM-LGENP 279
D E+AV ++ + +GQ C + V++K + +E LK + M LG+
Sbjct: 268 -FDDADIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPL 325
Query: 280 RKSNSIARIINKHHFSRLKNLLNDPMVKD-SIVYGG----SVDEANLFIEPTVLVDPPLQ 334
+ + +++K ++ + + + +++ GG +V +++PTV D
Sbjct: 326 DYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDD 385
Query: 335 AAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIV 394
I EEIFGP++ ++ ++ + N+ L FT + R+V +G++
Sbjct: 386 MTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLW 445
Query: 395 FNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPV------VRRSYLSEIWFR 447
N +PFGG +SG G + + + +S K V V Y ++F+
Sbjct: 446 IN--TYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTGKVDAPYAENLYFQ 502
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 162/351 (46%), Gaps = 29/351 (8%)
Query: 102 EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSK 160
EP+G+ I+ WN+P+ + +AAGNTVV+KP++ I
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 161 AIKVIEG-GPAVGEHLLQQ-KWDKIFFTGSTRVGRMVM-SAAVKHLTPITLELGGKCPAI 217
+ ++ G G VG+ L KI FTGST VG+ +M S A+ ++ ++L LGGK P I
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLI 296
Query: 218 IDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGE 277
I + D AV+ + S + G+ CIA L VEE + V+ + ++KM
Sbjct: 297 I---FADCDLNKAVQMGMSSVFFN-KGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352
Query: 278 NP--RKSNSIARIINKHHFSRLKNLLN--DPMVKD--SIVYGGS-VDEANLFIEPTVLVD 330
NP R +N ++H + L+ L+ VK+ ++V GG+ V F +PTV D
Sbjct: 353 NPLERDTNHGP----QNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTD 408
Query: 331 PPLQAAIMTEEIFGPLLPIITLKRIEDS-IDFINSRPKP----LVIYAFTKNERLQRRMV 385
I EE FG PI+ + R D +D + SR L FT++ +
Sbjct: 409 VEDHMYIAKEESFG---PIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVS 465
Query: 386 SETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVV 436
+ +G++ N VA PFGG +SG G G+ + + + K V
Sbjct: 466 DKLQAGTVFINTYNKTDVA--APFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 177/424 (41%), Gaps = 34/424 (8%)
Query: 25 RKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEA---FRDEIGVLQKSINFA--LQNLKE 79
RK LQ+ + +L E DI + ++ G +++ I +L +++ + L +KE
Sbjct: 68 RKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKE 127
Query: 80 WMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKP- 138
S + K + L PLG++ IS +NFP+ LS+ + AIA GN+VV KP
Sbjct: 128 VPSDIEGKTNKIYRL--------PLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPD 179
Query: 139 -----SEXXXXXXXXXXXXXPTYIDSKAIKVIEGGPAVGEHLLQQKWDK-IFFTGSTRVG 192
S P + + + ++ +G+ +L + I FTGST VG
Sbjct: 180 IQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVK---EIGDGMLTNPIPRLISFTGSTAVG 236
Query: 193 RMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDY 252
R + A + + LELGG P ++ S D + AV I K+ GQ C+ I+
Sbjct: 237 RHIGEIAGRAFKRMALELGGNNPF---AVLSDADVDRAVDAAIFGKF-IHQGQICMIINR 292
Query: 253 LLVEEKFTSTLVELLKVHIKKM-LGENPRKSNSIARIINKHHFSRLKNLLNDPMVKDSIV 311
++V + VE +K++ G+ + +IN+ + ++ D I
Sbjct: 293 IIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKT-DGIE 351
Query: 312 YGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVI 371
+ P V V + I E+F P+ II +++ID N L
Sbjct: 352 LAVEGKRVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSS 411
Query: 372 YAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADT--LPFGGIGESGIGSYHGKFSFDAF 429
FT + + + SG ND Q V D+ + FGG SG+G + + + F
Sbjct: 412 AVFTSDLEKGEKFALQIDSGMTHVND---QSVNDSPNIAFGGNKASGVGRFGNPWVVEEF 468
Query: 430 SHHK 433
+ K
Sbjct: 469 TVTK 472
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 162/351 (46%), Gaps = 29/351 (8%)
Query: 102 EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSK 160
EP+G+ I+ WN+P+ + +AAGNTVV+KP++ I
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 161 AIKVIEG-GPAVGEHLLQQ-KWDKIFFTGSTRVGRMVM-SAAVKHLTPITLELGGKCPAI 217
+ ++ G G VG+ L KI FTGST VG+ +M S A+ ++ ++LELGGK P I
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 218 IDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGE 277
I + D AV+ + S + G+ IA L VEE + V+ + ++KM
Sbjct: 297 I---FADCDLNKAVQMGMSSVFFN-KGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352
Query: 278 NP--RKSNSIARIINKHHFSRLKNLLN--DPMVKD--SIVYGGS-VDEANLFIEPTVLVD 330
NP R +N ++H + L+ L+ VK+ ++V GG+ V F +PTV D
Sbjct: 353 NPLERDTNHGP----QNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTD 408
Query: 331 PPLQAAIMTEEIFGPLLPIITLKRIEDS-IDFINSRPKP----LVIYAFTKNERLQRRMV 385
I EE FG PI+ + R D +D + SR L FT++ +
Sbjct: 409 VEDHMYIAKEESFG---PIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVS 465
Query: 386 SETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVV 436
+ +G++ N VA PFGG +SG G G+ + + + K V
Sbjct: 466 DKLQAGTVFINTYNKTDVA--APFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 162/351 (46%), Gaps = 29/351 (8%)
Query: 102 EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSK 160
EP+G+ I+ WN+P+ + +AAGNTVV+KP++ I
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 161 AIKVIEG-GPAVGEHLLQQ-KWDKIFFTGSTRVGRMVM-SAAVKHLTPITLELGGKCPAI 217
+ ++ G G VG+ L KI FTGST VG+ +M S A+ ++ ++LELGGK P I
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 218 IDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGE 277
I + D AV+ + S + G+ IA L VEE + V+ + ++KM
Sbjct: 297 I---FADCDLNKAVQMGMSSVFFN-KGENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352
Query: 278 NP--RKSNSIARIINKHHFSRLKNLLN--DPMVKD--SIVYGGS-VDEANLFIEPTVLVD 330
NP R +N ++H + L+ L+ VK+ ++V GG+ V F +PTV D
Sbjct: 353 NPLERDTNHGP----QNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTD 408
Query: 331 PPLQAAIMTEEIFGPLLPIITLKRIEDS-IDFINSRPKP----LVIYAFTKNERLQRRMV 385
I EE FG PI+ + R D +D + SR L FT++ +
Sbjct: 409 VEDHMYIAKEESFG---PIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVS 465
Query: 386 SETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVV 436
+ +G++ N VA PFGG +SG G G+ + + + K V
Sbjct: 466 DKLQAGTVFINTYNKTDVA--APFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 165/405 (40%), Gaps = 25/405 (6%)
Query: 25 RKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWMSSK 84
R L +L ++E + +++ GK AF DEI + F +
Sbjct: 84 RAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRF--------FAGA 135
Query: 85 KAKLPAVAVLSYAE-----IVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPS 139
L +A Y E I +PLG+V I+ WN+P+ ++ L A+AAGN VVLKPS
Sbjct: 136 ARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPS 195
Query: 140 EXXXXXXXXXXXXXPTYIDSKAIKVIEG-GPAVGEHLLQQ-KWDKIFFTGSTRVGRMVMS 197
E + + ++ G G VG+ L K + TGS G ++S
Sbjct: 196 EITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIIS 255
Query: 198 AAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEE 257
+ +ELGGK P I+ D EA V+ + Y AGQ C A + ++
Sbjct: 256 HTASSIKRTHMELGGKAPVIV---FDDADIEAVVEGVRTFGY-YNAGQDCTAACRIYAQK 311
Query: 258 KFTSTLVELLKVHIKKMLGENP-RKSNSIARIINKHHFSRLKNLLNDPMVKDSI--VYGG 314
TLVE L + + P +S + + + H R+ + + I + GG
Sbjct: 312 GIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGG 371
Query: 315 SVDEAN-LFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYA 373
+ N + PT+L AI+ +E+FGP++ + E +++ N L
Sbjct: 372 EKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSV 431
Query: 374 FTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIG 418
+TK+ R+ + G N + + +P GG SG G
Sbjct: 432 WTKDVGRAHRVSARLQYGCTWVNTHFM--LVSEMPHGGQKLSGYG 474
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 161/351 (45%), Gaps = 29/351 (8%)
Query: 102 EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSK 160
EP+G+ I+ WN+P+ + +AAGNTVV+KP++ I
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 161 AIKVIEG-GPAVGEHLLQQ-KWDKIFFTGSTRVGRMVM-SAAVKHLTPITLELGGKCPAI 217
+ ++ G G VG+ L KI FTGST VG+ +M S A+ ++ ++L LGGK P I
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLI 296
Query: 218 IDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGE 277
I + D AV+ + S + G+ IA L VEE + V+ + ++KM
Sbjct: 297 I---FADCDLNKAVQMGMSSVFFN-KGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352
Query: 278 NP--RKSNSIARIINKHHFSRLKNLLN--DPMVKD--SIVYGGS-VDEANLFIEPTVLVD 330
NP R +N ++H + L+ L+ VK+ ++V GG+ V F +PTV D
Sbjct: 353 NPLERDTNHGP----QNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTD 408
Query: 331 PPLQAAIMTEEIFGPLLPIITLKRIEDS-IDFINSRPKP----LVIYAFTKNERLQRRMV 385
I EE FG PI+ + R D +D + SR L FT++ +
Sbjct: 409 VEDHMYIAKEESFG---PIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVS 465
Query: 386 SETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVV 436
+ +G++ N VA PFGG +SG G G+ + + + K V
Sbjct: 466 DKLQAGTVFINTYNKTDVA--APFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 176/399 (44%), Gaps = 25/399 (6%)
Query: 29 LQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWMSSKKAKL 88
L+R A LK + ++ R + ++ GK E+ + + K + ++Q +E K L
Sbjct: 70 LERFAATLKSRADELARVIGEETGKPLWESATEVTSXVNK-VAISVQAFRERTGEKSGPL 128
Query: 89 P-AVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXXXXXXX 147
A AVL + +P G+V + +NFP L ++ A+ AGN VV KPSE
Sbjct: 129 ADATAVLRH-----KPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAE 183
Query: 148 XXXXX-XPTYIDSKAIKVIEGGPAVGEHLLQQKW-DKIFFTGSTRVGRMVMSAAVKHLTP 205
+ + + +++GG G L + D +FFTGS+R G ++ S
Sbjct: 184 LTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQK 243
Query: 206 I-TLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKF--TST 262
I LE GG P +++ + D +AAV II S + AGQ C LLV + +
Sbjct: 244 ILALEXGGNNPLVVEEVA---DLDAAVYTIIQSAF-ISAGQRCTCARRLLVPQGAWGDAL 299
Query: 263 LVELLKVHIKKMLG---ENPRK-SNSIARIINKHHFSRLKNLLNDPMVKDSIVYGGSVDE 318
L L+ V +G E P ++ + H + + L + + +D
Sbjct: 300 LARLVAVSATLRVGRFDEQPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLLAXTQPIDG 359
Query: 319 ANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKN- 377
A L + P +L D A EE FGPLL +I +I N+ L + +
Sbjct: 360 AAL-LTPGIL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSR 417
Query: 378 ERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESG 416
ER ++ +V E+ +G + +N + A + PFGGIG SG
Sbjct: 418 ERFEQFLV-ESRAGIVNWNKQLTG-AASSAPFGGIGASG 454
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 161/348 (46%), Gaps = 23/348 (6%)
Query: 102 EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSK 160
EPLG+V I +WN+P+ ++L A+AAGN ++ KPSE +
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 199
Query: 161 AIKVIEG-GPAVGEHLLQQKW-DKIFFTGSTRVGRMVM-SAAVKHLTPITLELGGKCPAI 217
V+ G G VG+ L + +KI FTG T G+ VM SA+ L +T+ELGGK P I
Sbjct: 200 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 259
Query: 218 IDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLV----EEKFTSTLVELLKVHIKK 273
I D + A +++ + +GQ C + + + +F + ++E ++ +
Sbjct: 260 I---FPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQ---RI 312
Query: 274 MLGENPRKSNSIARIINKHHF-SRLKNLLNDPMVKDSIVYGGS--VDEA---NLFIEPTV 327
LG+ ++ + +++ H S L + + K ++ GG D A ++ PTV
Sbjct: 313 RLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTV 372
Query: 328 LVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSE 387
D I+ EEIFGP++ I+ +++I N L T++ R +
Sbjct: 373 FTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHR 432
Query: 388 TSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPV 435
+G I + + + A+ +P GG +SG+G +G + ++ K V
Sbjct: 433 LEAG-ICWINTWGESPAE-MPVGGYKQSGVGRENGLTTLAHYTRIKSV 478
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 161/348 (46%), Gaps = 23/348 (6%)
Query: 102 EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSK 160
EPLG+V I +WN+P+ ++L A+AAGN ++ KPSE +
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 161 AIKVIEG-GPAVGEHLLQQKW-DKIFFTGSTRVGRMVM-SAAVKHLTPITLELGGKCPAI 217
V+ G G VG+ L + +KI FTG T G+ VM SA+ L +T+ELGGK P I
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 218 IDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLV----EEKFTSTLVELLKVHIKK 273
I D + A +++ + +GQ C + + + +F + ++E ++ +
Sbjct: 261 I---FPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQ---RI 313
Query: 274 MLGENPRKSNSIARIINKHHF-SRLKNLLNDPMVKDSIVYGGS--VDEA---NLFIEPTV 327
LG+ ++ + +++ H S L + + K ++ GG D A ++ PTV
Sbjct: 314 RLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTV 373
Query: 328 LVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSE 387
D I+ EEIFGP++ I+ +++I N L T++ R +
Sbjct: 374 FTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHR 433
Query: 388 TSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPV 435
+G I + + + A+ +P GG +SG+G +G + ++ K V
Sbjct: 434 LEAG-ICWINTWGESPAE-MPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 184/465 (39%), Gaps = 38/465 (8%)
Query: 4 ERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRA--LNQDLGKHHVEAFRD 61
+ + D+ Y + K +A W A IYRA L ++ + VE
Sbjct: 46 QASIADVDAAYEAAKKAQAEWAATPAAERSAI-------IYRAAELLEEHREEIVEWLIK 98
Query: 62 EIGVLQKSINFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPL------------GLVLI 109
E G + N + L ++ + A P + I P G+V +
Sbjct: 99 ESGSTRSKANLEI-TLAGNITKESASFPGRV---HGRISPSNTPGKENRVYRVAKGVVGV 154
Query: 110 ISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXXXXXXXX--XXXXXPTYIDSKAIKVIEG 167
IS WNFP+ LS+ + A+A GN VV+KP+ + + I + G
Sbjct: 155 ISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAG 214
Query: 168 -GPAVGEHLLQQKWDK-IFFTGSTRVGRMVMSAAVKH--LTPITLELGGKCPAIIDSLTS 223
G +G+H + K I FTGST VGR V A+ + + LELGG P ++ +
Sbjct: 215 AGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLADAD 274
Query: 224 SWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSN 283
A GQ C++I+ ++V+ +E +K + +P
Sbjct: 275 IDAAAQAAAVGAFLHQ----GQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEG 330
Query: 284 S-IARIINKHHFSRLKNLLNDPMVKDSIVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEI 342
+ + +IN S LK + + + V E L + P V D I EEI
Sbjct: 331 TLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGRL-VHPHVFSDVTSDMEIAREEI 389
Query: 343 FGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQF 402
FGPL+ ++ + + N+ L ++K+ + + SG + ND +
Sbjct: 390 FGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVND 449
Query: 403 VADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRSYLSEIWFR 447
+ FGG SG+G ++G ++ + F+ + + + ++F+
Sbjct: 450 EPHVM-FGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRSAENLYFQ 493
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 160/348 (45%), Gaps = 23/348 (6%)
Query: 102 EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSK 160
EPLG+V I +WN+P+ ++L A+AAGN ++ KPSE +
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 199
Query: 161 AIKVIEG-GPAVGEHLLQQKW-DKIFFTGSTRVGRMVM-SAAVKHLTPITLELGGKCPAI 217
V+ G G VG+ L + +KI FTG T G+ VM SA+ L +T+ LGGK P I
Sbjct: 200 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMALGGKSPLI 259
Query: 218 IDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLV----EEKFTSTLVELLKVHIKK 273
I D + A +++ + +GQ C + + + +F + ++E ++ +
Sbjct: 260 I---FPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQ---RI 312
Query: 274 MLGENPRKSNSIARIINKHHF-SRLKNLLNDPMVKDSIVYGGS--VDEA---NLFIEPTV 327
LG+ ++ + +++ H S L + + K ++ GG D A ++ PTV
Sbjct: 313 RLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTV 372
Query: 328 LVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSE 387
D I+ EEIFGP++ I+ +++I N L T++ R +
Sbjct: 373 FTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHR 432
Query: 388 TSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPV 435
+G I + + + A+ +P GG +SG+G +G + ++ K V
Sbjct: 433 LEAG-ICWINTWGESPAE-MPVGGYKQSGVGRENGLTTLAHYTRIKSV 478
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 158/347 (45%), Gaps = 21/347 (6%)
Query: 102 EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSK 160
EPLG+V I +WN+P+ ++L A+AAGN ++ KPSE +
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 161 AIKVIEG-GPAVGEHLLQQKW-DKIFFTGSTRVGRMVM-SAAVKHLTPITLELGGKCPAI 217
V+ G G VG+ L + +KI FTG T G+ VM SA+ L +T+ELGGK P I
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 218 IDSLTSSWDKEAAVKRIIVSKY---GPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKM 274
I D + A +++ + G A + + +F + ++E ++ +
Sbjct: 261 I---FPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQQARFEAKVLERVQ---RIR 314
Query: 275 LGENPRKSNSIARIINKHHF-SRLKNLLNDPMVKDSIVYGGS--VDEA---NLFIEPTVL 328
LG+ ++ + +++ H S L + + K ++ GG D A ++ PTV
Sbjct: 315 LGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVF 374
Query: 329 VDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSET 388
D I+ EEIFGP++ I+ +++I N L T++ R +
Sbjct: 375 TDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRL 434
Query: 389 SSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPV 435
+G I + + + A+ +P GG +SG+G +G + ++ K V
Sbjct: 435 EAG-ICWINTWGESPAE-MPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 154/361 (42%), Gaps = 35/361 (9%)
Query: 102 EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXXXXXXXXXXXXXPTYIDSKA 161
EPLG+V I+ +N+P+ ++ + + GN VV+KPS P + KA
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPS---------ISDPLPAAMAVKA 206
Query: 162 IKVIEGGPAVGEHLLQ---QKWDKIF---------FTGSTRVG-RMVMSAAVKHLTPITL 208
+ + G P LL ++ +KI FTGST VG R+V VK +
Sbjct: 207 L-LDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGGVKQYV---M 262
Query: 209 ELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLK 268
ELGG PAI+ D + A +I Y AGQ C AI +L E LVE +
Sbjct: 263 ELGGGDPAIV---LEDADLDLAADKIARGIYS-YAGQRCDAIKLVLAERPVYGKLVEEVA 318
Query: 269 VHIKKMLGENPRKSN-SIARIINKHHFSRLKNLLNDPMVKDSIVYGGSVDEANLFIEPTV 327
+ + +PR + +I+ + + D + K V G +++PT+
Sbjct: 319 KRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTL 378
Query: 328 LVDPPLQAAIMT---EEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRM 384
+ P + M E+F P+ + +K ++ +I+ N RP L F ++ RR
Sbjct: 379 VEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRA 438
Query: 385 VSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRSYLSEI 444
V G+I ND + PFGG +SG+ ++ +A + +K +V +
Sbjct: 439 VRLLEVGAIYINDMPRHGIG-YYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYKGKGV 497
Query: 445 W 445
W
Sbjct: 498 W 498
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 154/361 (42%), Gaps = 35/361 (9%)
Query: 102 EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXXXXXXXXXXXXXPTYIDSKA 161
EPLG+V I+ +N+P+ ++ + + GN VV+KPS P + KA
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPS---------ISDPLPAAMAVKA 206
Query: 162 IKVIEGGPAVGEHLLQ---QKWDKIF---------FTGSTRVG-RMVMSAAVKHLTPITL 208
+ + G P LL ++ +KI FTGST VG R+V VK +
Sbjct: 207 L-LDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGGVKQYV---M 262
Query: 209 ELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLK 268
ELGG PAI+ D + A +I Y AGQ C AI +L E LVE +
Sbjct: 263 ELGGGDPAIV---LEDADLDLAADKIARGIYS-YAGQRCDAIKLVLAERPVYGKLVEEVA 318
Query: 269 VHIKKMLGENPRKSN-SIARIINKHHFSRLKNLLNDPMVKDSIVYGGSVDEANLFIEPTV 327
+ + +PR + +I+ + + D + K V G +++PT+
Sbjct: 319 KRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTL 378
Query: 328 LVDPPLQAAIMT---EEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRM 384
+ P + M E+F P+ + +K ++ +I+ N RP L F ++ RR
Sbjct: 379 VEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRA 438
Query: 385 VSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRSYLSEI 444
V G+I ND + PFGG +SG+ ++ +A + +K +V +
Sbjct: 439 VRLLEVGAIYINDMPRHGIG-YYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYKGKGV 497
Query: 445 W 445
W
Sbjct: 498 W 498
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 157/347 (45%), Gaps = 21/347 (6%)
Query: 102 EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSK 160
EPLG+V I +WN+P+ ++L A+AAGN ++ KPSE +
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 161 AIKVIEG-GPAVGEHLLQQKW-DKIFFTGSTRVGRMVM-SAAVKHLTPITLELGGKCPAI 217
V+ G G VG+ L + +KI FTG T G+ VM SA+ L +T+ELGGK P I
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 218 IDSLTSSWDKEAAVKRIIVSKY---GPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKM 274
I D + A +++ + G + + +F + ++E ++ +
Sbjct: 261 I---FPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHRSQQARFEAKVLERVQ---RIR 314
Query: 275 LGENPRKSNSIARIINKHHF-SRLKNLLNDPMVKDSIVYGGS--VDEA---NLFIEPTVL 328
LG+ ++ + +++ H S L + + K ++ GG D A ++ PTV
Sbjct: 315 LGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVF 374
Query: 329 VDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSET 388
D I+ EEIFGP++ I+ +++I N L T++ R +
Sbjct: 375 TDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRL 434
Query: 389 SSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPV 435
+G I + + + A+ +P GG +SG+G +G + ++ K V
Sbjct: 435 EAG-ICWINTWGESPAE-MPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 140/326 (42%), Gaps = 15/326 (4%)
Query: 105 GLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSKAIK 163
G+ + IS WNFP+ + L + A+ AGN+VV KP+E I A+
Sbjct: 651 GVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALY 710
Query: 164 VIEGGPAVGEHLLQQ-KWDKIFFTGSTRVGRMV---MSAAVKHLTPITLELGGKCPAIID 219
++ G +G L + FTGST V R + ++A + P+ E GG I D
Sbjct: 711 LVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIAD 770
Query: 220 SLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKM-LGEN 278
+ E ++ S + AGQ C A+ L V+E ++E++ +++ +G+
Sbjct: 771 ATAL---PEQVADDVVTSAF-RSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDP 826
Query: 279 PRKSNSIARIINKHHFSRLKNLLNDPMVKDSIVYGGSVDEANLFIEPTVLVDPPLQAAIM 338
+ + +I+ RL + + + + G E F+ P + +A +
Sbjct: 827 SDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAPE-GCFVAPHIF--ELTEAGQL 883
Query: 339 TEEIFGPLLPIITLK--RIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFN 396
TEE+FGP+L ++ + +E + I L + ++ + ++ G+I N
Sbjct: 884 TEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVN 943
Query: 397 DAVIQFVADTLPFGGIGESGIGSYHG 422
+I V PFGG G SG G G
Sbjct: 944 RNMIGAVVGVQPFGGNGLSGTGPKAG 969
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 153/361 (42%), Gaps = 35/361 (9%)
Query: 102 EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXXXXXXXXXXXXXPTYIDSKA 161
EPLG+V I+ +N+P+ ++ + + GN VV+KPS P + KA
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPS---------ISDPLPAAMAVKA 206
Query: 162 IKVIEGGPAVGEHLLQ---QKWDKIF---------FTGSTRVG-RMVMSAAVKHLTPITL 208
+ + G P LL ++ +KI FTGST VG R+V VK +
Sbjct: 207 L-LDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGGVKQYV---M 262
Query: 209 ELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLK 268
ELGG PAI+ D + A +I Y AGQ C AI +L E LVE +
Sbjct: 263 ELGGGDPAIV---LEDADLDLAADKIARGIYS-YAGQRCDAIKLVLAERPVYGKLVEEVA 318
Query: 269 VHIKKMLGENPRKSN-SIARIINKHHFSRLKNLLNDPMVKDSIVYGGSVDEANLFIEPTV 327
+ + +PR + +I+ + + D + K V G +++PT
Sbjct: 319 KRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTF 378
Query: 328 LVDPPLQAAIMT---EEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRM 384
+ P + M E+F P+ + +K ++ +I+ N RP L F ++ RR
Sbjct: 379 VEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRA 438
Query: 385 VSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRSYLSEI 444
V G+I ND + PFGG +SG+ ++ +A + +K +V +
Sbjct: 439 VRLLEVGAIYINDMPRHGIG-YYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYKGKGV 497
Query: 445 W 445
W
Sbjct: 498 W 498
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 179/431 (41%), Gaps = 24/431 (5%)
Query: 23 SWRKLQLQR-------LKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQ 75
+W K+ + R + L + + ++ + + GK+ EA E+G +++ FA
Sbjct: 58 TWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAG 116
Query: 76 NLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVV 135
M L ++A A P+G+V I+ +NFP+ + AIA GNT +
Sbjct: 117 APSLMMGDS---LASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFI 173
Query: 136 LKPSEXXXXXXXXXXXXXPTYIDSKAI-KVIEGGPAVGEHLLQQKWDK-IFFTGSTRVGR 193
LKPSE K + V+ G V +L+ K I F GS VG
Sbjct: 174 LKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGE 233
Query: 194 MVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYL 253
V ++L + G K I+ + + E V I+ + +G AG+ C+A +
Sbjct: 234 YVYKKGSENLKRVQSLTGAKNHTIV---LNDANLEDTVTNIVGAAFG-SAGERCMACAVV 289
Query: 254 LVEEKFTSTLVELLKVHIKKM-LGENPRKSNSIARIINKHHFSRLKNLLNDPMVKDS-IV 311
VEE + L+ + + +G + +I + + R + + + + + +V
Sbjct: 290 TVEEGIADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLV 349
Query: 312 YGG--SVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPL 369
G +V + F+ PT+ + + I +EIF P+L +I +K ++++I+ N
Sbjct: 350 CDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFAN 409
Query: 370 VIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYH--GKFSFD 427
FT N R +G + N V +A PF G S G+ H GK S D
Sbjct: 410 GACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMA-FFPFSGWKSSFFGTLHANGKDSVD 468
Query: 428 AFSHHKPVVRR 438
++ K V R
Sbjct: 469 FYTRKKVVTAR 479
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 139/335 (41%), Gaps = 21/335 (6%)
Query: 102 EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXXXXXX-XXXXXXXPTYIDSK 160
EP G+ +I+ WNFP+ +S+ AI GN VV KPS +
Sbjct: 665 EPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEG 724
Query: 161 AIKVIEG-GPAVGEHLLQQ-KWDKIFFTGSTRVGRMVMSAAVK------HLTPITLELGG 212
G G +G++L+ I FTGS G ++ A K ++ I E+GG
Sbjct: 725 VFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGG 784
Query: 213 KCPAIIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLV----EEKFTSTLVELLK 268
K IID + AV ++ S +G GQ C A ++V +KF LV + K
Sbjct: 785 KNAIIIDDDADL---DEAVPHVLYSAFG-FQGQKCSACSRVIVLDAVYDKFIERLVSMAK 840
Query: 269 VHIKKMLGENPRKSNSIARIINKHHFSRLKNLLNDPMVKDSIVYGGSVDEANLFIEP-TV 327
+G + +N + + + +K + ++Y V + P T+
Sbjct: 841 A---TKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTI 897
Query: 328 LVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSE 387
+ + I EEIFGP+L ++ K + +I++ NS L F+++ + E
Sbjct: 898 IGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARRE 957
Query: 388 TSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHG 422
G++ N + + PFGG SG+G+ G
Sbjct: 958 FRVGNLYINRNNTGALVERQPFGGARMSGVGTKAG 992
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/436 (21%), Positives = 168/436 (38%), Gaps = 32/436 (7%)
Query: 14 YRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFA 73
Y+ + +E + R L + LKE E ++ + + GK E+ ++E+ + N+
Sbjct: 39 YKKWRHEEPASRAEILHDIANALKEHEDELAKXXTLEXGKLLSES-KEEVELCVSICNYY 97
Query: 74 LQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNT 133
+ E + K + L A + + G++ WNFP+ + GN
Sbjct: 98 ADHGPEXLKPTKLN----SDLGNAYYLKQSTGVIXACEPWNFPLYQVIRVFAPNFIVGNP 153
Query: 134 VVLK-----PSEXXXXXXXXXXXXXPTYIDSKAIKVIEGGPAVGEHLLQQKWDKIFFTGS 188
++LK P P + I + + + + + + TGS
Sbjct: 154 ILLKHAHNVPGSAALTAKIIKRAGAP---EGSLINLYPSYDQLADIIADPRIQGVALTGS 210
Query: 189 TRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGP-CAGQAC 247
R G V AA K+L T ELGG D+ D + V R +++ GQ C
Sbjct: 211 ERGGSAVAEAAGKNLKKSTXELGGN-----DAFIVLDDADPQVLRNVLNDARTYNDGQVC 265
Query: 248 IAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNSIARIINKHHFSRLKNLLNDPMVK 307
+ ++VE+ ++ LK + +P ++++ N + K L + VK
Sbjct: 266 TSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPXNSE---KAKEKL-EAQVK 321
Query: 308 DSIVYGGSV-------DEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSID 360
++I G V D F PT+L D + +E+FGP+ + ++ +I
Sbjct: 322 EAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQ 381
Query: 361 FINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSY 420
N L + +++ ++ +G V N I + LPFGGI +SG G
Sbjct: 382 LANDSSYGLGSSVIGSDIDRAKKVSAQIETGXTVINGRWI--TSGELPFGGIKKSGYGRE 439
Query: 421 HGKFSFDAFSHHKPVV 436
AF + V+
Sbjct: 440 LSGLGLXAFVNEHLVI 455
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 186/452 (41%), Gaps = 30/452 (6%)
Query: 4 ERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAF---R 60
E +Q RE ++ A R ++++ L++K + + ++ ++GK +VE +
Sbjct: 60 EETVQKTREAWKMWADIPAPKRGEIVRQIGDALRKKIKVLGSLVSLEMGKIYVEGVGEVQ 119
Query: 61 DEIGVLQKSINFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLS 120
+ + V ++ + + S++ P A++ P+GLV II+++NFP+ +
Sbjct: 120 EYVDVCDYAVGLSRMIGGPVLPSER---PGHALIEQWN----PVGLVGIITAFNFPVAVY 172
Query: 121 LEPLIGAIAAGNTVVLKPSEXXXXXXXXXXXXXPTYIDSKAI-----KVIEGGPAVGEHL 175
A+ GN + K + ++ + + GG +G +
Sbjct: 173 GWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNLPGAICSMTCGGADIGTAM 232
Query: 176 LQ-QKWDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRI 234
+ ++ D + FTGST VG+MV + LELGG I+ D V
Sbjct: 233 AKDERVDLLSFTGSTHVGKMVAMMVQERFGRKLLELGGNNAIIV---FEDADLNLVVPSA 289
Query: 235 IVSKYGPCAGQACIAIDYLLVEEKFTSTLVE-LLKVHIKKMLGENPRKSNSIARIINKHH 293
+ + G AGQ C L++ E +VE + K + + +G+ S + K
Sbjct: 290 VFASVG-TAGQRCTTTRRLMLHESVHDAVVERIAKAYKQVRIGDPWDPSTLYGPLHTKQA 348
Query: 294 FSR-LKNLLNDPMVKDSIVYGGSV-DEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIIT 351
+ L + ++V GG V D ++EPT++ A I+ E F P+L ++
Sbjct: 349 VDQYLAAIEQAKQQGGTLVCGGKVMDRPGNYVEPTIITGLAHDAPIVHTETFVPILYVLK 408
Query: 352 LKRIEDSIDFINSRPKPLVIYAFTKN-ERLQRRMVSETSSGSIVFNDAVIQFVADTLPFG 410
K E++ + N + L FTK+ R+ R + + S IV + FG
Sbjct: 409 FKTEEEAFAWNNEVQQGLSSSIFTKDLGRVFRWLGPKGSDCGIVNVNIPTSGAEIGGAFG 468
Query: 411 GIGESGIGSYHGKFSFDAFSHHKPVVRRSYLS 442
G +G G G S+ + +RRS +
Sbjct: 469 GEKHTGGGRESGSDSWKQY------MRRSTCT 494
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 126/340 (37%), Gaps = 15/340 (4%)
Query: 103 PLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXXXXXXXXXXXXXPTYIDSKAI 162
PLG++L I WNFP+ L + + AGN+ +LK + +
Sbjct: 126 PLGVILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGV 185
Query: 163 K--VIEGGPAVGEHLLQQKWDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDS 220
V V + + + + TGS R G + + A L LELGG P I+
Sbjct: 186 YGWVNANNEGVSQXINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIV-- 243
Query: 221 LTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPR 280
+ D E AVK + +Y GQ C A +VEE + + +P
Sbjct: 244 -LNDADLELAVKAAVAGRY-QNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPL 301
Query: 281 -KSNSIARIINKHHFSRLKNLLNDPMVKDS-IVYGGS--VDEANLFIEPTVLVDPPLQAA 336
+ N + L + + + + ++ GG E N + TVL D
Sbjct: 302 VEENDLGPXARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYA-ATVLADVTPDXT 360
Query: 337 IMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFN 396
+E+FGP+ I K ++ N L FT ++ L + G + N
Sbjct: 361 AFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEXAARLECGGVFIN 420
Query: 397 DAVIQFVADT-LPFGGIGESGIGSYHGKFSFDAFSHHKPV 435
+D + FGG+ +SG G F F + + V
Sbjct: 421 G---YSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTV 457
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 144/350 (41%), Gaps = 20/350 (5%)
Query: 103 PLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXXXXXXXXXXXXXPTYIDSKAI 162
P+GLV II+++NFP+ + A+ GN + K + ++ +
Sbjct: 157 PVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKL 216
Query: 163 -----KVIEGGPAVGEHLLQ-QKWDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPA 216
+ GG +G + + ++ + + FTGST+VG+ V + LELGG A
Sbjct: 217 PGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGN-NA 275
Query: 217 IIDSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLG 276
II + D V + + G AGQ C L + E +V LK ++
Sbjct: 276 IIAFEDA--DLSLVVPSALFAAVGT-AGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRV 332
Query: 277 ENPRKSNSI-ARIINKHHFSRLKNLLNDPMVKD-SIVYGGSV-DEANLFIEPTVLVDPPL 333
NP N + + K S + + + ++VYGG V D ++EPT++
Sbjct: 333 GNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGH 392
Query: 334 QAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKN-ERLQRRMVSETSSGS 392
A+I E F P+L + + E+ + N + L FTK+ R+ R + + S
Sbjct: 393 DASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCG 452
Query: 393 IVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRSYLS 442
IV + FGG +G G G DA+ + +RRS +
Sbjct: 453 IVNVNIPTSGAEIGGAFGGEKHTGGGRESGS---DAWKQY---MRRSTCT 496
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 134/343 (39%), Gaps = 36/343 (10%)
Query: 105 GLVLIISSWNF-PIGLSLEPLIGAIA-AGNTVVLKPSEXXXXXXXXXXX-XXPTYIDSKA 161
G V IS +NF IG +L GA A GN V+ KPS+ +
Sbjct: 205 GFVAAISPFNFTAIGGNL---AGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNI 261
Query: 162 IKVIEG-GPAVG------EHLLQQKWDKIFFTGSTRVGRMVMSAAVKHLTPITL--ELGG 212
I+ + GP G EHL I FTGS + + ++L L G
Sbjct: 262 IQFVPADGPLFGDTVTSSEHLC-----GINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAG 316
Query: 213 KCPAI-IDSLTSSWDKEAAVKRIIVS--KYGPCAGQACIAIDYLLVEEKFTSTLV-ELLK 268
+C + S D E+ V + S +YG GQ C A L V + LL+
Sbjct: 317 ECGGKNFHFVHRSADVESVVSGTLRSAFEYG---GQKCSACSRLYVPHSLWPQIKGRLLE 373
Query: 269 VHIKKMLGENPRKSNSI-ARIINKHHFSRLKNLLNDPMVKDS--IVYGGSVDEA-NLFIE 324
H + +G+ + + +I+ F+R+K L S I+ GG D++ F+E
Sbjct: 374 EHSRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVE 433
Query: 325 PTVLVDPPLQAAIMTEEIFGPLL-----PIITLKRIEDSIDFINSRPKPLVIYAFTKNER 379
P ++ Q IM EEIFGP+L P K +D S +++ K+
Sbjct: 434 PCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVV 493
Query: 380 LQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHG 422
+ V ++G+ ND + PFGG SG G
Sbjct: 494 QEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPG 536
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 139/349 (39%), Gaps = 17/349 (4%)
Query: 102 EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXX-XXXXXXXXXXXPTYIDSK 160
+P+G+ I+ +NFP + AIA GN +LKPSE + +
Sbjct: 161 QPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPIRLAELXIEAGLPAG 220
Query: 161 AIKVIEGGP-AVGEHLLQQKWDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIID 219
+ V+ G AV L + F GST + R V A + G K II
Sbjct: 221 ILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAXNGKRAQCFGGAKNHXII- 279
Query: 220 SLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLL-VEEKFTSTLVELLKVHIKKM-LGE 277
D + A +I + YG AG+ C AI + V E+ + L++ L ++ + +G
Sbjct: 280 --XPDADLDQAANALIGAGYG-SAGERCXAISVAVPVGEETANRLIDKLVPXVESLRIGP 336
Query: 278 NPRKSNSIARIINKHHFSRLKNLLNDPMVKDSIVYGGSVD------EANLFIEPTVLVDP 331
+ ++ K R+++L++ + + + + D E FI + D
Sbjct: 337 YTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDV 396
Query: 332 PLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSG 391
I EIFGP+L ++ + E+++ + +T++ R S + G
Sbjct: 397 TPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGDAARDFASRINIG 456
Query: 392 SIVFNDAVIQFVADTLPFGGIGESGIG--SYHGKFSFDAFSHHKPVVRR 438
+ N + +A FGG S G + HG S ++ K + R
Sbjct: 457 XVGVNVPIPVPLA-YHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR 504
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 134/343 (39%), Gaps = 36/343 (10%)
Query: 105 GLVLIISSWNF-PIGLSLEPLIGAIA-AGNTVVLKPSEXXXXXXXXXXX-XXPTYIDSKA 161
G V IS +NF IG +L GA A GN V+ KPS+ +
Sbjct: 205 GFVAAISPFNFTAIGGNL---AGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNI 261
Query: 162 IKVIEG-GPAVG------EHLLQQKWDKIFFTGSTRVGRMVMSAAVKHLTPITL--ELGG 212
I+ + GP G EHL I FTGS + + ++L L G
Sbjct: 262 IQFVPADGPLFGDTVTSSEHLC-----GINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAG 316
Query: 213 KCPAI-IDSLTSSWDKEAAVKRIIVS--KYGPCAGQACIAIDYLLVEEKFTSTLV-ELLK 268
+C + S D E+ V + S +YG GQ C A L V + LL+
Sbjct: 317 ECGGKNFHFVHRSADVESVVSGTLRSAFEYG---GQKCSACARLYVPHSLWPQIKGRLLE 373
Query: 269 VHIKKMLGENPRKSNSI-ARIINKHHFSRLKNLLNDPMVKDS--IVYGGSVDEA-NLFIE 324
H + +G+ + + +I+ F+R+K L S I+ GG D++ F+E
Sbjct: 374 EHSRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVE 433
Query: 325 PTVLVDPPLQAAIMTEEIFGPLL-----PIITLKRIEDSIDFINSRPKPLVIYAFTKNER 379
P ++ Q IM EEIFGP+L P K +D S +++ K+
Sbjct: 434 PCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVV 493
Query: 380 LQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHG 422
+ V ++G+ ND + PFGG SG G
Sbjct: 494 QEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPG 536
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 142/344 (41%), Gaps = 38/344 (11%)
Query: 105 GLVLIISSWNF-PIGLSLEPLIGAIA-AGNTVVLKPSEXXXXXXXXXXX-XXPTYIDSKA 161
G V IS +NF IG +L GA A GN V+ KPS+ +
Sbjct: 202 GFVAAISPFNFTAIGGNL---AGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNI 258
Query: 162 IKVIEG-GPAVG------EHLLQQKWDKIFFTGSTRVGRMVMSAAVKHLTPITL--ELGG 212
I+ + GP G EHL I FTGS + + ++L L G
Sbjct: 259 IQFVPADGPTFGDTVTSSEHLC-----GINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAG 313
Query: 213 KCPAI-IDSLTSSWDKEAAVKRIIVS--KYGPCAGQACIAIDYLLVEEKFTSTLV-ELLK 268
+C + SS D ++ V + S +YG GQ C A L V + + LL+
Sbjct: 314 ECGGKNFHFVHSSADVDSVVSGTLRSAFEYG---GQKCSACSRLYVPKSLWPQIKGRLLE 370
Query: 269 VHIKKMLGENPRKSNSI-ARIINKHHFSRLKNLLNDPMVKDS--IVYGGSVDEA-NLFIE 324
H + +G+ + + +I+ F+R+K L S I+ GG +E+ ++E
Sbjct: 371 EHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVE 430
Query: 325 PTVLVDPPLQAAIMTEEIFGPLLPIITL--KRIEDSIDFINSRPK-PLVIYAFTKNERLQ 381
P ++ Q IM EEIFGP+L + + +++ ++S L F +++ +
Sbjct: 431 PCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIV 490
Query: 382 R---RMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHG 422
+ RM+ ++G+ ND V PFGG SG G
Sbjct: 491 QEATRML-RNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPG 533
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 134/343 (39%), Gaps = 36/343 (10%)
Query: 105 GLVLIISSWNF-PIGLSLEPLIGAIA-AGNTVVLKPSEXXXXXXXXXXX-XXPTYIDSKA 161
G V IS +NF IG +L GA A GN V+ KPS+ +
Sbjct: 205 GFVAAISPFNFTAIGGNL---AGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNI 261
Query: 162 IKVIEG-GPAVG------EHLLQQKWDKIFFTGSTRVGRMVMSAAVKHLTPITL--ELGG 212
I+ + GP G EHL I FTGS + + ++L L G
Sbjct: 262 IQFVPADGPLFGDTVTSSEHLC-----GINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAG 316
Query: 213 KCPAI-IDSLTSSWDKEAAVKRIIVS--KYGPCAGQACIAIDYLLVEEKFTSTLV-ELLK 268
+C + S D E+ V + S +YG GQ C A L V + LL+
Sbjct: 317 ECGGKNFHFVHRSADVESVVSGTLRSAFEYG---GQKCSACLRLYVPHSLWPQIKGRLLE 373
Query: 269 VHIKKMLGENPRKSNSI-ARIINKHHFSRLKNLLNDPMVKDS--IVYGGSVDEA-NLFIE 324
H + +G+ + + +I+ F+R+K L S I+ GG D++ F+E
Sbjct: 374 EHSRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVE 433
Query: 325 PTVLVDPPLQAAIMTEEIFGPLL-----PIITLKRIEDSIDFINSRPKPLVIYAFTKNER 379
P ++ Q IM EEIFGP+L P K +D S +++ K+
Sbjct: 434 PCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVV 493
Query: 380 LQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHG 422
+ V ++G+ ND + PFGG SG G
Sbjct: 494 QEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPG 536
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 123/316 (38%), Gaps = 44/316 (13%)
Query: 105 GLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXXX--XXXXXXXXXXPTYIDSKAI 162
G+ L I+++NFP E A+ +G V++KP+ + A+
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 212
Query: 163 KVIEGGPAVGEHLLQQ--KWDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDS 220
+I G A LL Q +D + FTGS +AA P ++ G + DS
Sbjct: 213 SIICGSSA---GLLDQIRSFDVVSFTGSAD------TAATLRAHPAFVQRGARLNVQADS 263
Query: 221 LTSSWDKEAAVK---------RIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHI 271
L S+ A + +V + +GQ C AI V E ++E LK +
Sbjct: 264 LNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKL 323
Query: 272 KKMLGENPRKSN-SIARIINKHHFSRLKNLLNDPMVKDSIVYGGSV-----DEANL--FI 323
K+ NPR + ++++ + + + + + Y S +AN+ +
Sbjct: 324 AKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACV 383
Query: 324 EPTVLV--DPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQ 381
P + V DP + E+FGP+ + + D+ N+ P+ +A R Q
Sbjct: 384 APHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDT----NALPEA---HAVALARRGQ 436
Query: 382 RRMVSETSSGSIVFND 397
+V+ SI ND
Sbjct: 437 GSLVA-----SIYSND 447
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 123/316 (38%), Gaps = 44/316 (13%)
Query: 105 GLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXXX--XXXXXXXXXXPTYIDSKAI 162
G+ L I+++NFP E A+ +G V++KP+ + A+
Sbjct: 151 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 210
Query: 163 KVIEGGPAVGEHLLQQ--KWDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDS 220
+I G A LL Q +D + FTGS +AA P ++ G + DS
Sbjct: 211 SIICGSSA---GLLDQIRSFDVVSFTGSAD------TAATLRAHPAFVQRGARLNVEADS 261
Query: 221 LTSSWDKEAAVK---------RIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHI 271
L S+ A + +V + +GQ C AI V E ++E LK +
Sbjct: 262 LNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKL 321
Query: 272 KKMLGENPRKSN-SIARIINKHHFSRLKNLLNDPMVKDSIVYGGSV-----DEANL--FI 323
K+ NPR + ++++ + + + + + Y S +AN+ +
Sbjct: 322 AKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACV 381
Query: 324 EPTVLV--DPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQ 381
P + V DP + E+FGP+ + + D+ N+ P+ +A R Q
Sbjct: 382 APHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDT----NALPEA---HAVALARRGQ 434
Query: 382 RRMVSETSSGSIVFND 397
+V+ SI ND
Sbjct: 435 GSLVA-----SIYSND 445
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 123/316 (38%), Gaps = 44/316 (13%)
Query: 105 GLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXXX--XXXXXXXXXXPTYIDSKAI 162
G+ L I+++NFP E A+ +G V++KP+ + A+
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 212
Query: 163 KVIEGGPAVGEHLLQQ--KWDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDS 220
+I G A LL Q +D + FTGS +AA P ++ G + DS
Sbjct: 213 SIICGSSA---GLLDQIRSFDVVSFTGSAD------TAATLRAHPAFVQRGARLNVEADS 263
Query: 221 LTSSWDKEAAVK---------RIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHI 271
L S+ A + +V + +GQ C AI V E ++E LK +
Sbjct: 264 LNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKL 323
Query: 272 KKMLGENPRKSN-SIARIINKHHFSRLKNLLNDPMVKDSIVYGGSV-----DEANL--FI 323
K+ NPR + ++++ + + + + + Y S +AN+ +
Sbjct: 324 AKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACV 383
Query: 324 EPTVLV--DPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQ 381
P + V DP + E+FGP+ + + D+ N+ P+ +A R Q
Sbjct: 384 APHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDT----NALPEA---HAVALARRGQ 436
Query: 382 RRMVSETSSGSIVFND 397
+V+ SI ND
Sbjct: 437 GSLVA-----SIYSND 447
>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3V4C|B Chain B, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 528
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 101/276 (36%), Gaps = 51/276 (18%)
Query: 99 IVPEPLGLVLIISSWNFPIGLSLE--PLIGAIAAGNTVVLK-----PSEXXXXXXXXXXX 151
+V P+G V + + NFP+ S A+AAG VV+K P
Sbjct: 165 LVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAA 224
Query: 152 XXPTYIDSKAIKVIEGGPA-VGEHLLQQKWDK-IFFTGSTRVGRMV--MSAAVKHLTPIT 207
T + +I+GG VG L+Q K + FTGS GR + + AA P
Sbjct: 225 IRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFF 284
Query: 208 LELGGKCPAII---------DSLTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEE- 257
ELG P + ++L W AGQ C +V E
Sbjct: 285 GELGSVNPXFLLPEALKARAETLGQGW----------AGSLTXGAGQFCTNPGIAVVIEG 334
Query: 258 ----KFTSTLVE-LLKVHIKKMLGENPRKS--NSIARIINKHHFSRLKNLLNDPMVKDSI 310
+FT+ VE L KV + L + K+ + AR ++ L L + +D+
Sbjct: 335 ADADRFTTAAVEALAKVAPQTXLTDGIAKAYRDGQARFATRNAVKPL--LATESSGRDA- 391
Query: 311 VYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPL 346
NLF L + EE+FGPL
Sbjct: 392 -------SPNLFETTGAQF---LADHALGEEVFGPL 417
>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y51|B Chain B, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 122/316 (38%), Gaps = 44/316 (13%)
Query: 105 GLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXXX--XXXXXXXXXXPTYIDSKAI 162
G+ L I+++NFP A+ +G V++KP+ + A+
Sbjct: 153 GVALFINAFNFPSWGLWAKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 212
Query: 163 KVIEGGPAVGEHLLQQ--KWDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDS 220
+I G A LL Q +D + FTGS +AA P ++ G + DS
Sbjct: 213 SIICGSSA---GLLDQIRSFDVVSFTGSAD------TAATLRAHPAFVQRGARLNVEADS 263
Query: 221 LTSSWDKEAAVK---------RIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHI 271
L S+ A + +V + +GQ C AI V E ++E LK +
Sbjct: 264 LNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKL 323
Query: 272 KKMLGENPRKSN-SIARIINKHHFSRLKNLLNDPMVKDSIVYGGSV-----DEANL--FI 323
K+ NPR + ++++ + + + + + Y S +AN+ +
Sbjct: 324 AKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACV 383
Query: 324 EPTVLV--DPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQ 381
P + V DP + E+FGP+ + + D+ N+ P+ +A R Q
Sbjct: 384 APHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDT----NALPEA---HAVALARRGQ 436
Query: 382 RRMVSETSSGSIVFND 397
+V+ SI ND
Sbjct: 437 GSLVA-----SIYSND 447
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 122/316 (38%), Gaps = 44/316 (13%)
Query: 105 GLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSEXXX--XXXXXXXXXXPTYIDSKAI 162
G+ L I+++NFP E A+ +G V++KP+ + A+
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 212
Query: 163 KVIEGGPAVGEHLLQQ--KWDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDS 220
+I G A LL Q +D + FTGS +AA P ++ G + DS
Sbjct: 213 SIICGSSA---GLLDQIRSFDVVSFTGSAD------TAATLRAHPAFVQRGARLNVEADS 263
Query: 221 LTSSWDKEAAVK---------RIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHI 271
L S+ A + +V + +GQ AI V E ++E LK +
Sbjct: 264 LNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKATAIRRAFVPEAALEPVLEALKAKL 323
Query: 272 KKMLGENPRKSN-SIARIINKHHFSRLKNLLNDPMVKDSIVYGGSV-----DEANL--FI 323
K+ NPR + ++++ + + + + + Y S +AN+ +
Sbjct: 324 AKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACV 383
Query: 324 EPTVLV--DPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQ 381
P + V DP + E+FGP+ + + D+ N+ P+ +A R Q
Sbjct: 384 APHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDT----NALPEA---HAVALARRGQ 436
Query: 382 RRMVSETSSGSIVFND 397
+V+ SI ND
Sbjct: 437 GSLVA-----SIYSND 447
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,332,982
Number of Sequences: 62578
Number of extensions: 577634
Number of successful extensions: 1675
Number of sequences better than 100.0: 91
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1308
Number of HSP's gapped (non-prelim): 98
length of query: 485
length of database: 14,973,337
effective HSP length: 103
effective length of query: 382
effective length of database: 8,527,803
effective search space: 3257620746
effective search space used: 3257620746
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)