Query 011466
Match_columns 485
No_of_seqs 246 out of 1420
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 08:43:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011466.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011466hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sza_A Aldehyde dehydrogenase, 100.0 3E-101 9E-106 805.3 51.5 448 1-457 18-468 (469)
2 2wme_A BADH, betaine aldehyde 100.0 1E-99 3E-104 795.3 46.1 428 2-439 45-483 (490)
3 3iwj_A Putative aminoaldehyde 100.0 4.8E-97 2E-101 780.1 48.9 442 2-450 46-500 (503)
4 3ros_A NAD-dependent aldehyde 100.0 4.7E-97 2E-101 775.4 44.0 428 2-441 27-460 (484)
5 3rh9_A Succinate-semialdehyde 100.0 1.3E-96 5E-101 775.2 44.7 428 2-440 50-485 (506)
6 3ed6_A Betaine aldehyde dehydr 100.0 2E-96 7E-101 776.3 46.0 429 2-440 71-511 (520)
7 4f3x_A Putative aldehyde dehyd 100.0 1.4E-96 5E-101 774.3 43.9 428 2-438 63-496 (498)
8 3ifg_A Succinate-semialdehyde 100.0 1.4E-96 5E-101 772.4 41.4 427 2-438 51-483 (484)
9 3qan_A 1-pyrroline-5-carboxyla 100.0 8.8E-96 3E-100 774.4 45.6 429 2-439 75-516 (538)
10 2o2p_A Formyltetrahydrofolate 100.0 6.5E-96 2E-100 771.9 44.0 430 2-438 75-516 (517)
11 3lns_A Benzaldehyde dehydrogen 100.0 2.8E-95 9E-100 759.2 48.2 427 2-438 29-456 (457)
12 1wnd_A Putative betaine aldehy 100.0 1.4E-95 5E-100 766.2 46.3 428 2-438 61-494 (495)
13 3u4j_A NAD-dependent aldehyde 100.0 1E-95 4E-100 772.2 45.4 429 2-440 62-499 (528)
14 3ek1_A Aldehyde dehydrogenase; 100.0 2.8E-96 1E-100 772.4 40.3 427 2-439 71-502 (504)
15 1a4s_A ALDH, betaine aldehyde 100.0 1.5E-95 5E-100 768.0 44.3 427 2-439 59-496 (503)
16 3i44_A Aldehyde dehydrogenase; 100.0 3.2E-95 1.1E-99 763.8 46.4 423 1-436 63-495 (497)
17 3prl_A NADP-dependent glyceral 100.0 2E-95 7E-100 766.9 44.6 427 2-439 50-483 (505)
18 1bxs_A Aldehyde dehydrogenase; 100.0 2.3E-95 8E-100 765.7 44.1 428 2-439 59-496 (501)
19 3k2w_A Betaine-aldehyde dehydr 100.0 1E-95 3E-100 768.9 41.1 428 2-439 51-488 (497)
20 3r31_A BADH, betaine aldehyde 100.0 6.9E-96 2E-100 771.7 39.2 431 2-445 53-494 (517)
21 1o04_A Aldehyde dehydrogenase, 100.0 1.5E-95 5E-100 766.9 41.3 428 2-439 58-495 (500)
22 3pqa_A Lactaldehyde dehydrogen 100.0 3.5E-95 1.2E-99 761.6 43.7 421 2-439 35-464 (486)
23 3b4w_A Aldehyde dehydrogenase; 100.0 2.3E-95 8E-100 765.3 42.0 427 2-439 47-482 (495)
24 4e4g_A Methylmalonate-semialde 100.0 4.4E-95 1.5E-99 766.3 43.5 429 2-439 65-505 (521)
25 2imp_A Lactaldehyde dehydrogen 100.0 7.1E-95 2.4E-99 760.3 44.2 427 2-438 45-478 (479)
26 2d4e_A 5-carboxymethyl-2-hydro 100.0 1.3E-94 4.3E-99 763.1 45.3 427 2-439 65-505 (515)
27 3etf_A Putative succinate-semi 100.0 1.9E-94 6.4E-99 754.9 45.8 427 2-439 30-461 (462)
28 3jz4_A Succinate-semialdehyde 100.0 1.7E-94 5.9E-99 757.8 44.2 427 2-438 48-480 (481)
29 1uzb_A 1-pyrroline-5-carboxyla 100.0 4.8E-94 1.6E-98 759.5 47.2 428 2-438 75-515 (516)
30 2w8n_A Succinate-semialdehyde 100.0 1.6E-94 5.4E-99 758.0 41.2 427 2-438 49-485 (487)
31 4h7n_A Aldehyde dehydrogenase; 100.0 4.2E-94 1.4E-98 753.6 43.3 436 2-446 29-470 (474)
32 2j6l_A Aldehyde dehydrogenase 100.0 6.8E-94 2.3E-98 755.5 43.9 428 2-438 60-498 (500)
33 1uxt_A Glyceraldehyde-3-phosph 100.0 2.4E-94 8.3E-99 758.5 40.0 435 2-448 55-500 (501)
34 2ve5_A BADH, betaine aldehyde 100.0 1.7E-93 5.8E-98 752.4 45.7 428 2-439 45-483 (490)
35 3r64_A NAD dependent benzaldeh 100.0 1.2E-93 4.1E-98 755.1 43.9 428 2-440 51-486 (508)
36 4dng_A Uncharacterized aldehyd 100.0 1.5E-93 5.3E-98 751.8 44.0 428 2-439 45-478 (485)
37 1euh_A NADP dependent non phos 100.0 1.3E-93 4.3E-98 750.1 42.1 423 2-438 41-473 (475)
38 1t90_A MMSDH, probable methylm 100.0 4.7E-93 1.6E-97 747.3 41.2 428 2-439 44-480 (486)
39 3ty7_A Putative aldehyde dehyd 100.0 3.4E-93 1.2E-97 747.9 37.6 421 2-437 46-475 (478)
40 4e3x_A Delta-1-pyrroline-5-car 100.0 4.3E-92 1.5E-96 747.7 42.0 440 1-449 100-560 (563)
41 3ju8_A Succinylglutamic semial 100.0 1.1E-89 3.9E-94 722.3 42.3 421 2-439 43-471 (490)
42 4f9i_A Proline dehydrogenase/d 100.0 4.2E-89 1.4E-93 762.0 43.8 430 2-440 569-1011(1026)
43 2y53_A Aldehyde dehydrogenase 100.0 9.6E-89 3.3E-93 722.4 38.9 431 1-439 43-519 (534)
44 3haz_A Proline dehydrogenase; 100.0 2.2E-87 7.6E-92 746.5 42.5 428 2-439 551-987 (1001)
45 3v4c_A Aldehyde dehydrogenase 100.0 4.3E-86 1.5E-90 701.1 37.9 421 2-436 64-515 (528)
46 1ez0_A ALDH, aldehyde dehydrog 100.0 3.1E-85 1E-89 691.8 37.7 418 2-436 31-480 (510)
47 1vlu_A Gamma-glutamyl phosphat 100.0 4E-81 1.4E-85 652.3 25.2 405 2-453 15-449 (468)
48 3k9d_A LMO1179 protein, aldehy 100.0 2.3E-79 7.9E-84 640.3 34.9 406 2-438 13-448 (464)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 9.1E-80 3.1E-84 641.2 24.1 398 1-456 29-447 (463)
50 4ghk_A Gamma-glutamyl phosphat 100.0 3.8E-77 1.3E-81 619.8 27.2 387 2-439 27-439 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 7.1E-77 2.4E-81 614.8 27.5 385 2-439 15-422 (427)
52 3my7_A Alcohol dehydrogenase/a 100.0 4.1E-75 1.4E-79 606.2 29.7 368 2-400 8-402 (452)
53 4gic_A HDH, histidinol dehydro 97.4 0.13 4.3E-06 51.4 29.3 342 12-439 22-401 (423)
54 1kae_A HDH, histidinol dehydro 96.2 1.2 4.1E-05 44.4 30.4 329 23-438 30-393 (434)
55 3v42_A Folliculin; tumor suppr 59.8 9 0.00031 34.9 4.5 67 120-191 20-86 (226)
56 2fiu_A Conserved hypothetical 39.0 37 0.0013 26.3 4.5 21 346-366 55-75 (99)
57 3v4g_A Arginine repressor; vib 38.0 1.4E+02 0.0047 26.0 8.4 37 129-168 115-152 (180)
58 1b93_A Protein (methylglyoxal 30.0 68 0.0023 27.1 5.0 97 105-208 12-118 (152)
59 3fgh_A Transcription factor A, 28.3 1E+02 0.0035 21.5 5.1 36 9-44 29-64 (67)
60 2yvq_A Carbamoyl-phosphate syn 25.8 75 0.0026 26.3 4.5 73 130-210 49-132 (143)
61 1use_A VAsp, vasodilator-stimu 24.8 84 0.0029 20.6 3.5 28 25-52 13-40 (45)
62 3lap_A Arginine repressor; arg 24.7 1.8E+02 0.006 25.0 6.7 34 25-59 18-55 (170)
63 2co9_A Thymus high mobility gr 24.2 1.9E+02 0.0064 22.2 6.4 41 9-49 48-88 (102)
64 2xw6_A MGS, methylglyoxal synt 22.3 33 0.0011 28.4 1.5 81 121-208 21-110 (134)
65 3lo3_A Uncharacterized conserv 22.0 99 0.0034 23.5 4.2 23 345-367 53-75 (94)
66 2eqz_A High mobility group pro 21.3 1.5E+02 0.005 21.9 5.0 37 8-44 47-83 (86)
67 1v63_A Nucleolar transcription 21.1 1.8E+02 0.0061 22.3 5.6 41 8-48 36-76 (101)
No 1
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=2.6e-101 Score=805.25 Aligned_cols=448 Identities=40% Similarity=0.749 Sum_probs=418.1
Q ss_pred CcHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHH
Q 011466 1 MNLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEW 80 (485)
Q Consensus 1 ~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~ 80 (485)
+|+++++++|++||+.|+.+|.++|.++|+++++.|+++.++|++++++|+|||..+++..|+..++..++++++.+++|
T Consensus 18 ~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~ 97 (469)
T 3sza_A 18 SKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKLPEW 97 (469)
T ss_dssp CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 47999999999999999999999999999999999999999999999999999999998679999999999999999988
Q ss_pred hccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccccCcC
Q 011466 81 MSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTYIDSK 160 (485)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~alP~g 160 (485)
..+..........+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.+++|+|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~alP~g 177 (469)
T 3sza_A 98 AADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLDKD 177 (469)
T ss_dssp HSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHHSCTT
T ss_pred hcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCcc
Confidence 86554332222234578899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeccCChhHHHhHhhCCCCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHHhcc
Q 011466 161 AIKVIEGGPAVGEHLLQQKWDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYG 240 (485)
Q Consensus 161 ~v~vv~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~~~~ 240 (485)
++|+|+|+.+.+..|+.|++|+|+||||+++|+.|++.+++++||+++|||||||+||+ +|||+|.|++.+++++|
T Consensus 178 vv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~---~dADl~~Aa~~i~~~~~- 253 (469)
T 3sza_A 178 LYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVD---KNCDLDVACRRIAWGKF- 253 (469)
T ss_dssp TSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEEC---TTSCHHHHHHHHHHHHH-
T ss_pred eEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEEC---CCCCHHHHHHHHHHHHH-
Confidence 99999998778888888899999999999999999999999999999999999999999 99999999999999999
Q ss_pred CCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcCccCCCeEeeCCCcCCC
Q 011466 241 PCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLNDPMVKDSIVYGGSVDEA 319 (485)
Q Consensus 241 ~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~~~~g~~~~~gg~~~~~ 319 (485)
.|+||.|++++|||||+++||+|+++|+++++++. |+|.+ ++++||++++++++++.+++ +|+++++||..+.+
T Consensus 254 ~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~rv~~~i----~ga~v~~GG~~~~~ 328 (469)
T 3sza_A 254 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFY-GEDAKKSRDYGRIISARHFQRVMGLI----EGQKVAYGGTGDAA 328 (469)
T ss_dssp GGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHH-CSCGGGCTTCCCCSCHHHHHHHHHHH----TTSEEEECCCEETT
T ss_pred hcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhc-CCCCcccCcccccCCHHHHHHHHHHH----cCCEEEeCCccCCC
Confidence 99999999999999999999999999999999985 77766 88999999999999999999 38999999987678
Q ss_pred CceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcceEEEcCcc
Q 011466 320 NLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAV 399 (485)
Q Consensus 320 g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~~ 399 (485)
|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.
T Consensus 329 g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~ 408 (469)
T 3sza_A 329 TRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVI 408 (469)
T ss_dssp TTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSS
T ss_pred CceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeCCCCc--cccccCCCchhHHH
Q 011466 400 IQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRSYLSE--IWFRFPPWNNYKLQ 457 (485)
Q Consensus 400 ~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~--~~~~~~p~~~~~~~ 457 (485)
.+...+.+||||+|.||+|+++|.+|+++||+.|+|++++++.+ .+++||||+.+|.+
T Consensus 409 ~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~~~~~~~~yppy~~~~~~ 468 (469)
T 3sza_A 409 VHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPPSPAKMTQ 468 (469)
T ss_dssp GGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCSSCCGGGGGGSSSCCC----
T ss_pred CCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECCcccccccccccCCCCccccc
Confidence 66667899999999999999999999999999999999987644 57999999987764
No 2
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=9.9e-100 Score=795.35 Aligned_cols=428 Identities=24% Similarity=0.363 Sum_probs=400.9
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++|+++|++||+.|+++|..+|.++|++++++|++++++|++++++|+|||+.+++..|+..+++.++++++..+++.
T Consensus 45 dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~ 124 (490)
T 2wme_A 45 DVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIE 124 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 79999999999999999999999999999999999999999999999999999999985679999999999987665433
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
. +. .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++.++ +|+|
T Consensus 125 ~-~~---~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~g 200 (490)
T 2wme_A 125 G-EQ---IPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200 (490)
T ss_dssp E-EE---EEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTT
T ss_pred C-cc---ccccCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCC
Confidence 2 21 11223457889999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHH-HHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHH
Q 011466 161 AIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMS-AAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVS 237 (485)
Q Consensus 161 ~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~-~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~ 237 (485)
++|+|+| +.++++.|++|| ||+|+||||+.+|++|++ .+++++||+++|||||||+||+ +|||++.|++.++++
T Consensus 201 v~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~---~dAdl~~A~~~~~~~ 277 (490)
T 2wme_A 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIF---PDADLDRAADIAVMA 277 (490)
T ss_dssp SEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEC---TTSCHHHHHHHHHHH
T ss_pred cEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEc---cCccHHHHHHHHHHH
Confidence 9999999 678999999998 999999999999999876 5567799999999999999999 999999999999999
Q ss_pred hccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCCC
Q 011466 238 KYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGGS 315 (485)
Q Consensus 238 ~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg~ 315 (485)
+| .|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++.+++++.++|++ ..+|+++++||.
T Consensus 278 ~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~ 356 (490)
T 2wme_A 278 NF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGE 356 (490)
T ss_dssp HH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCS
T ss_pred Hh-ccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCc
Confidence 99 99999999999999999999999999999999999999998 8999999999999999999999 568999999997
Q ss_pred cC-----CCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCc
Q 011466 316 VD-----EANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSS 390 (485)
Q Consensus 316 ~~-----~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~ 390 (485)
.. .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 357 ~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~a 436 (490)
T 2wme_A 357 RVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEA 436 (490)
T ss_dssp BCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCC
T ss_pred ccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCe
Confidence 53 3689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeC
Q 011466 391 GSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 391 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 439 (485)
|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 437 G~v~iN~~~~--~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~ 483 (490)
T 2wme_A 437 GICWINTWGE--SPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp SEEEESCCSC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred eEEEEeCCCC--CCCCCCcccccccccCchhHHHHHHHhhceeEEEEEC
Confidence 9999998643 5688999999999999999999999999999999875
No 3
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=4.8e-97 Score=780.05 Aligned_cols=442 Identities=24% Similarity=0.389 Sum_probs=411.0
Q ss_pred cHHHHHHHHHHHhH-----hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHH
Q 011466 2 NLERDLQDMREYYR-----SGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQN 76 (485)
Q Consensus 2 dv~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~ 76 (485)
|+++|+++|++||+ .|+.+|..+|.++|+++++.|+++.++|++++++|+|||..+++ .|+..+++.++++++.
T Consensus 46 ~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~ 124 (503)
T 3iwj_A 46 DVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAA-WDIDDVAGCFEYYADL 124 (503)
T ss_dssp HHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 79999999999999 99999999999999999999999999999999999999999998 7999999999999998
Q ss_pred HHHHhccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc
Q 011466 77 LKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY 156 (485)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a 156 (485)
++++.............+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 204 (503)
T 3iwj_A 125 AEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEV 204 (503)
T ss_dssp HHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHh
Confidence 88776543211111112447899999999999999999999999999999999999999999999999999999999998
Q ss_pred -cCcCceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHH
Q 011466 157 -IDSKAIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKR 233 (485)
Q Consensus 157 -lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~ 233 (485)
+|+|++|+|+| +.+.+++|+.|+ ||+|+||||+++|+.|++.+++++||+++|||||||+||+ +|||++.|++.
T Consensus 205 GlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~---~dADl~~Aa~~ 281 (503)
T 3iwj_A 205 GLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVF---EDVDLDKAAEW 281 (503)
T ss_dssp TCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHGGGTCCEEEECCCCEEEEEC---SSSCHHHHHHH
T ss_pred CcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHhcCCCCEEEECCCCCceEEc---CCCCHHHHHHH
Confidence 99999999999 568899999997 9999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEe
Q 011466 234 IIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIV 311 (485)
Q Consensus 234 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~ 311 (485)
+++++| .|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++.+++++.+++++ ..+|++++
T Consensus 282 i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~ 360 (503)
T 3iwj_A 282 AIFGCF-WTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATIL 360 (503)
T ss_dssp HHHHHT-GGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHH-hcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEE
Confidence 999999 99999999999999999999999999999999999999998 8899999999999999999998 46799999
Q ss_pred eCCCcC---CCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc
Q 011466 312 YGGSVD---EANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSET 388 (485)
Q Consensus 312 ~gg~~~---~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~ 388 (485)
+||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++
T Consensus 361 ~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l 440 (503)
T 3iwj_A 361 TGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAF 440 (503)
T ss_dssp ECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHC
T ss_pred ecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhC
Confidence 999764 47999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeCCCCccccccCC
Q 011466 389 SSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRSYLSEIWFRFPP 450 (485)
Q Consensus 389 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~~~~~~~p 450 (485)
++|+|+||++. ...+.+||||+|.||+|+++|.+|+++||+.|+|+++....+..|..||
T Consensus 441 ~aG~v~iN~~~--~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~~~~~~~~~~~~p 500 (503)
T 3iwj_A 441 KAGIVWVNCSQ--PCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYISEEPWGWYQPP 500 (503)
T ss_dssp CSSEEEESSSC--CCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEECCSSCCCCSCCC
T ss_pred CcceEEEcCCC--CCCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEEeCCCCcccccCCC
Confidence 99999999864 3568899999999999999999999999999999988654444444444
No 4
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=4.7e-97 Score=775.37 Aligned_cols=428 Identities=20% Similarity=0.313 Sum_probs=405.8
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..+++.++++++.++++.
T Consensus 27 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~ 105 (484)
T 3ros_A 27 QIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCVSICNYYADHGPEML 105 (484)
T ss_dssp HHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999999999999999999999999999999999 899999999999999998887
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
...... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|
T Consensus 106 ~~~~~~----~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~g 181 (484)
T 3ros_A 106 KPTKLN----SDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEG 181 (484)
T ss_dssp SCEEEC----CTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCTT
T ss_pred CCeecc----CCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcC
Confidence 654322 13457899999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeeccCCh-hHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHHh
Q 011466 161 AIKVIEGGP-AVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSK 238 (485)
Q Consensus 161 ~v~vv~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~~ 238 (485)
++|+|+|+. +.++ |++|+ ||+|+||||+++|+.|++.+++++||+++|||||||+||+ +|||++.|++.+++++
T Consensus 182 vv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~---~dADl~~Aa~~i~~~~ 257 (484)
T 3ros_A 182 SLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVL---DDADPQVLRNVLNDAR 257 (484)
T ss_dssp SEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEEC---TTCCHHHHHHHHTTTT
T ss_pred eEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeC---CCCCHHHHHHHHHHHH
Confidence 999999954 5566 99997 9999999999999999999999999999999999999999 9999999999999999
Q ss_pred ccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCCCc
Q 011466 239 YGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGGSV 316 (485)
Q Consensus 239 ~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg~~ 316 (485)
| .|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||++++++++++.++|++ ..+|+++++||..
T Consensus 258 ~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~ 336 (484)
T 3ros_A 258 T-YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPE 336 (484)
T ss_dssp T-GGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred h-cCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCc
Confidence 9 99999999999999999999999999999999999999998 8899999999999999999999 5679999999975
Q ss_pred -CCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcceEEE
Q 011466 317 -DEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVF 395 (485)
Q Consensus 317 -~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~i 395 (485)
+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+|
T Consensus 337 ~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~v 416 (484)
T 3ros_A 337 IDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVI 416 (484)
T ss_dssp CCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEE
T ss_pred CCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEE
Confidence 3579999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeCCC
Q 011466 396 NDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRSYL 441 (485)
Q Consensus 396 N~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~~ 441 (485)
|++. ...+.+||||+|.||+|+++|++|+++||+.|+|+++...
T Consensus 417 N~~~--~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~ 460 (484)
T 3ros_A 417 NGRW--ITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTKN 460 (484)
T ss_dssp TSCC--CCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGGG
T ss_pred CCCC--CCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCCC
Confidence 9964 3578999999999999999999999999999999987643
No 5
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=1.3e-96 Score=775.23 Aligned_cols=428 Identities=26% Similarity=0.389 Sum_probs=404.5
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..+++.++++++.++++.
T Consensus 50 dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~ 128 (506)
T 3rh9_A 50 DVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALD 128 (506)
T ss_dssp HHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGC
T ss_pred HHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999999999999999999999999999999999 899999999999999887765
Q ss_pred ccccccccccccCceeEEEe-ecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCc
Q 011466 82 SSKKAKLPAVAVLSYAEIVP-EPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDS 159 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~ 159 (485)
.... +. ..+...++++ +|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+
T Consensus 129 ~~~~-~~---~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~ 204 (506)
T 3rh9_A 129 SHTI-PE---KPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPD 204 (506)
T ss_dssp CEEC-SC---CGGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCT
T ss_pred Cccc-cc---CCCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcCh
Confidence 4322 11 1345678888 9999999999999999999999999999999999999999999999999999998 999
Q ss_pred CceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHH
Q 011466 160 KAIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVS 237 (485)
Q Consensus 160 g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~ 237 (485)
|++|+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.+++++||+++|||||||+||+ +|||++.|++.++++
T Consensus 205 gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~---~dADl~~Aa~~i~~~ 281 (506)
T 3rh9_A 205 GMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVF---DDADLEAAADNLIAN 281 (506)
T ss_dssp TSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTTTCEEEEECCCCCEEEEC---TTSCHHHHHHHHHHH
T ss_pred hhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhcCCceEEecCCCCceEEC---CCCCHHHHHHHHHHH
Confidence 99999999 678899999998 9999999999999999999999999999999999999999 999999999999999
Q ss_pred hccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCCC
Q 011466 238 KYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGGS 315 (485)
Q Consensus 238 ~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg~ 315 (485)
+| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++++++++.+++++ ..+|+++++||.
T Consensus 282 ~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~ 360 (506)
T 3rh9_A 282 KF-RGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQ 360 (506)
T ss_dssp HH-GGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCC
T ss_pred HH-HhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCC
Confidence 99 99999999999999999999999999999999999999998 8899999999999999999999 567999999997
Q ss_pred c-CC-CCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcceE
Q 011466 316 V-DE-ANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSI 393 (485)
Q Consensus 316 ~-~~-~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v 393 (485)
. +. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|
T Consensus 361 ~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V 440 (506)
T 3rh9_A 361 PAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHV 440 (506)
T ss_dssp GGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEE
T ss_pred cCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceE
Confidence 5 33 799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeCC
Q 011466 394 VFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRSY 440 (485)
Q Consensus 394 ~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 440 (485)
+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|+++..
T Consensus 441 ~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~~ 485 (506)
T 3rh9_A 441 GWNTGTG--PTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFA 485 (506)
T ss_dssp EESCCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC--
T ss_pred EEcCCCC--CCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcCc
Confidence 9999765 35789999999999999999999999999999988753
No 6
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=2e-96 Score=776.29 Aligned_cols=429 Identities=25% Similarity=0.377 Sum_probs=404.6
Q ss_pred cHHHHHHHHHHHh--HhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHH
Q 011466 2 NLERDLQDMREYY--RSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKE 79 (485)
Q Consensus 2 dv~~av~~A~~a~--~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~ 79 (485)
|+++|+++|++|| +.|+.++..+|.++|++++++|+++.++|++++++|+|||..+++ .|+..+++.+++++..++.
T Consensus 71 dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~ 149 (520)
T 3ed6_A 71 DAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADK 149 (520)
T ss_dssp HHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 7899999999999 899999999999999999999999999999999999999999999 7999999999999887766
Q ss_pred HhccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cC
Q 011466 80 WMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-ID 158 (485)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP 158 (485)
+... ..+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|
T Consensus 150 ~~g~-~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP 226 (520)
T 3ed6_A 150 DGGE-MIDS--PIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFP 226 (520)
T ss_dssp CCEE-EECC--SSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCC
T ss_pred hcCe-eccc--CCCCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCC
Confidence 4432 1111 112446789999999999999999999999999999999999999999999999999999999998 99
Q ss_pred cCceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHH
Q 011466 159 SKAIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIV 236 (485)
Q Consensus 159 ~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~ 236 (485)
+|++|+|+| +.+.++.|++|+ ||+|+||||+++|+.|++.+++++||+++|||||||+||+ +|||++.|++.+++
T Consensus 227 ~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~---~dADl~~Aa~~i~~ 303 (520)
T 3ed6_A 227 KGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIF---DDADFELAVDQALN 303 (520)
T ss_dssp TTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEEC---TTSCHHHHHHHHHH
T ss_pred CCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhcCCCEEEEcCCCCeeEEC---CCCCHHHHHHHHHH
Confidence 999999999 678999999997 9999999999999999999999999999999999999999 99999999999999
Q ss_pred HhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCC
Q 011466 237 SKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGG 314 (485)
Q Consensus 237 ~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg 314 (485)
++| .|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++.+++++.+++++ ..+|+++++||
T Consensus 304 ~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG 382 (520)
T 3ed6_A 304 GGY-FHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGG 382 (520)
T ss_dssp HHH-GGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHH-hcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCC
Confidence 999 99999999999999999999999999999999999999998 8899999999999999999999 56799999999
Q ss_pred CcC-----CCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcC
Q 011466 315 SVD-----EANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETS 389 (485)
Q Consensus 315 ~~~-----~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~ 389 (485)
... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++++
T Consensus 383 ~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~ 462 (520)
T 3ed6_A 383 KRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLK 462 (520)
T ss_dssp SCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSC
T ss_pred CcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCC
Confidence 763 469999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeCC
Q 011466 390 SGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRSY 440 (485)
Q Consensus 390 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 440 (485)
+|+|+||++..+ .+.+||||+|.||+|+++|.+|+++||+.|+|+++..
T Consensus 463 aG~V~iN~~~~~--~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~~ 511 (520)
T 3ed6_A 463 LGTVWINDFHPY--FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNTN 511 (520)
T ss_dssp CSEEEESCSCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEESS
T ss_pred cceEEECCCCCC--CCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcCC
Confidence 999999997654 5889999999999999999999999999999998753
No 7
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=1.4e-96 Score=774.35 Aligned_cols=428 Identities=23% Similarity=0.370 Sum_probs=403.1
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++|+++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..++...|+..+++.++++++.++++.
T Consensus 63 dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~ 142 (498)
T 4f3x_A 63 QIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLH 142 (498)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhc
Confidence 79999999999999999999999999999999999999999999999999999999933899999999999988776643
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccccCcCc
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTYIDSKA 161 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~alP~g~ 161 (485)
. +..+ ....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.+++|+|+
T Consensus 143 ~-~~~~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ealP~gv 219 (498)
T 4f3x_A 143 A-PAAG--EYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADILPEGV 219 (498)
T ss_dssp E-ECBE--EEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTTSCTTS
T ss_pred C-cccc--CCcccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHhCCcCe
Confidence 2 2211 112345788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHHhc
Q 011466 162 IKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKY 239 (485)
Q Consensus 162 v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~~~ 239 (485)
+|+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.+++++||+++|||||||+||+ +|||++.|++.+++++|
T Consensus 220 ~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~---~dADl~~Aa~~i~~~~~ 296 (498)
T 4f3x_A 220 VNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVY---GDADLEAVVNGIRTFGY 296 (498)
T ss_dssp EEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEEC---TTSCHHHHHHHHHHHTT
T ss_pred EEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCCCCcEEEC---CCCCHHHHHHHHHHHHH
Confidence 999999 677999999997 9999999999999999999999999999999999999999 99999999999999999
Q ss_pred cCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCC-eEeeCCCc
Q 011466 240 GPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKD-SIVYGGSV 316 (485)
Q Consensus 240 ~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~-~~~~gg~~ 316 (485)
.|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++.+++++.+++++ ..+|+ ++++||..
T Consensus 297 -~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~ 375 (498)
T 4f3x_A 297 -YNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRT 375 (498)
T ss_dssp -GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSB
T ss_pred -hcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCcc
Confidence 99999999999999999999999999999999999999988 8899999999999999999999 56799 99999975
Q ss_pred -CCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcceEEE
Q 011466 317 -DEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVF 395 (485)
Q Consensus 317 -~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~i 395 (485)
+.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+|
T Consensus 376 ~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~v 455 (498)
T 4f3x_A 376 GSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWI 455 (498)
T ss_dssp CCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEE
T ss_pred CCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 3479999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEe
Q 011466 396 NDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRR 438 (485)
Q Consensus 396 N~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 438 (485)
|++..+ .+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 456 N~~~~~--~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~ 496 (498)
T 4f3x_A 456 NTHFML--TNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMIN 496 (498)
T ss_dssp SCCSCC--CTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred cCCCCC--CCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence 997754 48899999999999999999999999999999875
No 8
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=1.4e-96 Score=772.43 Aligned_cols=427 Identities=25% Similarity=0.392 Sum_probs=401.0
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++|+++|++||+.|+.+|.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..+++.+++++....+..
T Consensus 51 dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~ 129 (484)
T 3ifg_A 51 ETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGKRVA 129 (484)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhc
Confidence 7999999999999999999999999999999999999999999999999999999998 899999999999987665432
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
... .. ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++ +|+|
T Consensus 130 g~~-~~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~g 206 (484)
T 3ifg_A 130 GDT-LP--TPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKG 206 (484)
T ss_dssp EEE-EC--CSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTT
T ss_pred Ccc-cc--ccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcc
Confidence 211 11 1112456889999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHHh
Q 011466 161 AIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSK 238 (485)
Q Consensus 161 ~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~~ 238 (485)
++|+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.+++++||+++|||||||+||+ +|||++.|++.+++++
T Consensus 207 v~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~iV~---~dADl~~Aa~~i~~~~ 283 (484)
T 3ifg_A 207 VLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVF---DDADLDAAVEGAIASK 283 (484)
T ss_dssp SEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEECCCCCEEEEC---TTSCHHHHHHHHHHHH
T ss_pred cEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCCceEEecCCCCeEEEC---CCCCHHHHHHHHHHHH
Confidence 9999999 568899999997 9999999999999999999999999999999999999999 9999999999999999
Q ss_pred ccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCCCc
Q 011466 239 YGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGGSV 316 (485)
Q Consensus 239 ~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg~~ 316 (485)
| .|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++.+++++.+++++ ..+|+++++||..
T Consensus 284 ~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~ 362 (484)
T 3ifg_A 284 Y-RNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKR 362 (484)
T ss_dssp H-GGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSB
T ss_pred H-hcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 9 99999999999999999999999999999999999999998 8899999999999999999999 5679999999976
Q ss_pred C-CCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcceEEE
Q 011466 317 D-EANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVF 395 (485)
Q Consensus 317 ~-~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~i 395 (485)
. .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+|
T Consensus 363 ~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~i 442 (484)
T 3ifg_A 363 HALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGI 442 (484)
T ss_dssp CTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEE
T ss_pred cCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 4 379999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEe
Q 011466 396 NDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRR 438 (485)
Q Consensus 396 N~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 438 (485)
|+.. ...+.+||||+|+||+|+++|.+|+++||+.|+|++.
T Consensus 443 N~~~--~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 443 NTGL--ISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp SCSC--CCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred cCCC--CCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 9864 3568899999999999999999999999999999763
No 9
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=8.8e-96 Score=774.37 Aligned_cols=429 Identities=23% Similarity=0.359 Sum_probs=405.2
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++|+++|++||+.|+.++..+|.++|+++++.|+++.++|++++++|+|||..+++ .|+..+++.++++++.+.++.
T Consensus 75 dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~ 153 (538)
T 3qan_A 75 LAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELN 153 (538)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999999999999999999999999999999998 699999999999999866666
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
.++.... ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|
T Consensus 154 ~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~g 230 (538)
T 3qan_A 154 RGKEILS---RPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKG 230 (538)
T ss_dssp TCBCCCC---CTTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTT
T ss_pred CCeeecc---cCCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCC
Confidence 5554322 12457899999999999999999999999999999999999999999999999999999999997 9999
Q ss_pred ceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcc------cCceeeecCccCcEEEeCCCCCCcHHHHHH
Q 011466 161 AIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKH------LTPITLELGGKCPAIIDSLTSSWDKEAAVK 232 (485)
Q Consensus 161 ~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~------~~p~~lelgG~~~~iV~~~~~daDl~~aa~ 232 (485)
++|+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.++++ +||+++|||||||+||+ +|||++.|++
T Consensus 231 vv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~---~dADl~~Aa~ 307 (538)
T 3qan_A 231 VINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVD---RDADLDLAAE 307 (538)
T ss_dssp SEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEEC---TTSCHHHHHH
T ss_pred eEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEEC---CCCCHHHHHH
Confidence 9999999 678999999997 99999999999999999999998 99999999999999999 9999999999
Q ss_pred HHHHHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcCc-cCCCeE
Q 011466 233 RIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLNDP-MVKDSI 310 (485)
Q Consensus 233 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~~-~~g~~~ 310 (485)
.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++++++ .+| ++
T Consensus 308 ~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~ 385 (538)
T 3qan_A 308 SILVSAF-GFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RL 385 (538)
T ss_dssp HHHHHHH-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE
T ss_pred HHHHHHH-hcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eE
Confidence 9999999 99999999999999999999999999999999999999998 88999999999999999999984 567 99
Q ss_pred eeCCCcCC-CCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcC
Q 011466 311 VYGGSVDE-ANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETS 389 (485)
Q Consensus 311 ~~gg~~~~-~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~ 389 (485)
++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++++++
T Consensus 386 ~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~ 465 (538)
T 3qan_A 386 MTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFH 465 (538)
T ss_dssp EECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCC
T ss_pred EeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCC
Confidence 99998654 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEcCccccccCCCCCcccCCCCCCC-CcchHHHHHHhhccccEEEeC
Q 011466 390 SGSIVFNDAVIQFVADTLPFGGIGESGIG-SYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 390 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~t~~k~v~~~~ 439 (485)
+|+|+||+...+...+.+||||+|.||+| +++|++|+++||+.|+|+++.
T Consensus 466 aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~~ 516 (538)
T 3qan_A 466 VGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMY 516 (538)
T ss_dssp CSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEEC
T ss_pred eeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEec
Confidence 99999995444444789999999999999 999999999999999999875
No 10
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=6.5e-96 Score=771.89 Aligned_cols=430 Identities=24% Similarity=0.361 Sum_probs=401.7
Q ss_pred cHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHH
Q 011466 2 NLERDLQDMREYYR--SGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKE 79 (485)
Q Consensus 2 dv~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~ 79 (485)
|+++|+++|++||+ .|+.+|..+|.++|++++++|+++.++|++++++|+|||..+++..|+..+++.++++++.+++
T Consensus 75 dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~ 154 (517)
T 2o2p_A 75 DVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDK 154 (517)
T ss_dssp HHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999 9999999999999999999999999999999999999999999757999999999999887766
Q ss_pred Hhccccccccc-cccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-c
Q 011466 80 WMSSKKAKLPA-VAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-I 157 (485)
Q Consensus 80 ~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-l 157 (485)
+.... .+... ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++.++ +
T Consensus 155 ~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGl 233 (517)
T 2o2p_A 155 IQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGI 233 (517)
T ss_dssp CCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTC
T ss_pred hcCcc-ccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCC
Confidence 54322 11110 011225789999999999999999999999999999999999999999999999999999999998 9
Q ss_pred CcCceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHh-cccCceeeecCccCcEEEeCCCCCCcHHHHHHHH
Q 011466 158 DSKAIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAV-KHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRI 234 (485)
Q Consensus 158 P~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~-~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i 234 (485)
|+|++|+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.++ +++||+++|||||||+||+ +|||++.|++.+
T Consensus 234 P~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~---~dADl~~Aa~~i 310 (517)
T 2o2p_A 234 PKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIF---ADCDLNKAVQMG 310 (517)
T ss_dssp CTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEEC---TTSCHHHHHHHH
T ss_pred CcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEEC---CCCCHHHHHHHH
Confidence 9999999999 667899999997 999999999999999999999 9999999999999999999 999999999999
Q ss_pred HHHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEee
Q 011466 235 IVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVY 312 (485)
Q Consensus 235 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~ 312 (485)
++++| .|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++.+++++.+++++ ..+|+++++
T Consensus 311 ~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~ 389 (517)
T 2o2p_A 311 MSSVF-FNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVC 389 (517)
T ss_dssp HHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHH-hcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 99999 99999999999999999999999999999999999999988 8899999999999999999998 467999999
Q ss_pred CCCcCC-CCceeecEEEeCCCCCCcccccccccceeeeeecCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcC
Q 011466 313 GGSVDE-ANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKR--IEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETS 389 (485)
Q Consensus 313 gg~~~~-~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~ 389 (485)
||.... .|+|++|||+.+++++|++++||+||||++|++|+| +||||+++|+++|||++||||+|.+++++++++++
T Consensus 390 gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~ 469 (517)
T 2o2p_A 390 GGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQ 469 (517)
T ss_dssp CCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCC
T ss_pred ccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcC
Confidence 997643 699999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred cceEEEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEe
Q 011466 390 SGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRR 438 (485)
Q Consensus 390 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 438 (485)
+|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 470 aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 470 AGTVFINTYNK--TDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp SSEEEESCSSC--CCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred EeEEEECCCCC--CCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 99999998643 467899999999999999999999999999999874
No 11
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=2.8e-95 Score=759.17 Aligned_cols=427 Identities=35% Similarity=0.650 Sum_probs=402.9
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.+|.++|.++|+++++.|+++.++|++++++|+|||..+++..|+..+++.++++++.+++|.
T Consensus 29 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~ 108 (457)
T 3lns_A 29 KIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWV 108 (457)
T ss_dssp HHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 78999999999999999999999999999999999999999999999999999999986699999999999999999987
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccccCcCc
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTYIDSKA 161 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~alP~g~ 161 (485)
+++.........+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.+++|+|+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~alP~gv 188 (457)
T 3lns_A 109 APVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEY 188 (457)
T ss_dssp SCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHCCTTT
T ss_pred ccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCHhh
Confidence 65443322222345789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCChhHHHhHhhCCCCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHHhccC
Q 011466 162 IKVIEGGPAVGEHLLQQKWDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYGP 241 (485)
Q Consensus 162 v~vv~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~~~~~ 241 (485)
+|+|+|+.+.+.+|++++||+|+||||+++|+.|++.+++++||+++|||||||+||+ +|||++.|++.+++++| .
T Consensus 189 v~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~---~dADl~~Aa~~i~~~~~-~ 264 (457)
T 3lns_A 189 VAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVL---PDADLDQTVNQLMFGKF-I 264 (457)
T ss_dssp EEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEEC---TTCCHHHHHHHHHHHHH-G
T ss_pred EEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeEC---CCCCHHHHHHHHHHHHH-H
Confidence 9999998889999998669999999999999999999999999999999999999999 99999999999999999 9
Q ss_pred CCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHhcCccCCCeEeeCCCcCCCCc
Q 011466 242 CAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNSIARIINKHHFSRLKNLLNDPMVKDSIVYGGSVDEANL 321 (485)
Q Consensus 242 ~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~~~~g~~~~~gg~~~~~g~ 321 (485)
|+||.|++++|||||++++|+|+++|++++++++ |.+. ++||++++++++++.+++++. ++++++||..+.+|+
T Consensus 265 n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~-~~gpli~~~~~~rv~~~i~~a--~~~~~~gg~~~~~g~ 338 (457)
T 3lns_A 265 NSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN-STGKLVTERQVQRLVSLLEAT--QGQVLVGSQADVSKR 338 (457)
T ss_dssp GGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT-TTCCCSSHHHHHHHHHHHHHC--CSEEEECCCEEGGGT
T ss_pred hCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc-cccCCCCHHHHHHHHHHHHhc--CCeEEeCCccCCCCc
Confidence 9999999999999999999999999999999988 6666 999999999999999999985 369999998666799
Q ss_pred eeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhc-CCCCceEEEecCCHHHHHHHHhhcCcceEEEcCccc
Q 011466 322 FIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINS-RPKPLVIYAFTKNERLQRRMVSETSSGSIVFNDAVI 400 (485)
Q Consensus 322 ~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~~~ 400 (485)
|++|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||++||||+|.+.++++++++++|+|+||++..
T Consensus 339 ~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~ 418 (457)
T 3lns_A 339 ALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVML 418 (457)
T ss_dssp EECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSG
T ss_pred eeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCC
Confidence 9999999999999999999999999999999999999999999 999999999999999999999999999999999866
Q ss_pred cccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEe
Q 011466 401 QFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRR 438 (485)
Q Consensus 401 ~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 438 (485)
+...+.+||||+|.||+|+++|.+|+++||+.|+|++.
T Consensus 419 ~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 419 HAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp GGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred CCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 66678999999999999999999999999999999864
No 12
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=1.4e-95 Score=766.17 Aligned_cols=428 Identities=23% Similarity=0.359 Sum_probs=401.7
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..+++.++++++.++++.
T Consensus 61 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~ 140 (495)
T 1wnd_A 61 QVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLN 140 (495)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 78999999999999999999999999999999999999999999999999999999983499999999999988776653
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccccCcCc
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTYIDSKA 161 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~alP~g~ 161 (485)
. +..+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.+++|+|+
T Consensus 141 g-~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ealP~gv 217 (495)
T 1wnd_A 141 G-LAAGE--YLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGV 217 (495)
T ss_dssp E-ECBEE--EETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTTSCTTS
T ss_pred C-ccccC--CCCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHhCCcCe
Confidence 2 22111 11233578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHHhc
Q 011466 162 IKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKY 239 (485)
Q Consensus 162 v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~~~ 239 (485)
+|+|+| +.+.+++|++|+ ||+|+||||+.+|+.|++.+++++||+++|||||||+||+ +|||++.|++.+++++|
T Consensus 218 v~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~v~lELGGk~p~iV~---~dADl~~Aa~~i~~~~~ 294 (495)
T 1wnd_A 218 VNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVF---DDADIEAVVEGVRTFGY 294 (495)
T ss_dssp EEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEEC---TTSCHHHHHHHHHHHTT
T ss_pred EEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCccccccCCCCeEEEC---CcCCHHHHHHHHHHHHH
Confidence 999999 778899999997 9999999999999999999999999999999999999999 99999999999999999
Q ss_pred cCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCC-CeEeeCCC-
Q 011466 240 GPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVK-DSIVYGGS- 315 (485)
Q Consensus 240 ~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g-~~~~~gg~- 315 (485)
.|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.+++++ ..+| +++++||.
T Consensus 295 -~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~ 373 (495)
T 1wnd_A 295 -YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEK 373 (495)
T ss_dssp -GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSB
T ss_pred -hcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcc
Confidence 99999999999999999999999999999999999999998 8999999999999999999999 4568 99999997
Q ss_pred cCCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcceEEE
Q 011466 316 VDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVF 395 (485)
Q Consensus 316 ~~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~i 395 (485)
.+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+|
T Consensus 374 ~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~i 453 (495)
T 1wnd_A 374 RKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWV 453 (495)
T ss_dssp CSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEE
T ss_pred cCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEE
Confidence 54469999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEe
Q 011466 396 NDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRR 438 (485)
Q Consensus 396 N~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 438 (485)
|++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+.+
T Consensus 454 N~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 454 NTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp SCCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCCC--CCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 98653 458899999999999999999999999999999764
No 13
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1e-95 Score=772.19 Aligned_cols=429 Identities=27% Similarity=0.403 Sum_probs=405.6
Q ss_pred cHHHHHHHHHHHh--HhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHH
Q 011466 2 NLERDLQDMREYY--RSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKE 79 (485)
Q Consensus 2 dv~~av~~A~~a~--~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~ 79 (485)
|+++++++|++|| ..|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..+++.++++++.+++
T Consensus 62 dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~ 140 (528)
T 3u4j_A 62 DVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARA 140 (528)
T ss_dssp HHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 7899999999999 789999999999999999999999999999999999999999996 8999999999999988877
Q ss_pred HhccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cC
Q 011466 80 WMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-ID 158 (485)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP 158 (485)
+.. +..+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|
T Consensus 141 ~~~-~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP 217 (528)
T 3u4j_A 141 LEG-QTHNN--IGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIP 217 (528)
T ss_dssp CCE-EEECC--SCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCC
T ss_pred hcC-eeecc--CCCCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCC
Confidence 643 22111 113456899999999999999999999999999999999999999999999999999999999998 99
Q ss_pred cCceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHH
Q 011466 159 SKAIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIV 236 (485)
Q Consensus 159 ~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~ 236 (485)
+|++|+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.+++++||+++|||||||+||+ +|||++.|++.+++
T Consensus 218 ~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~---~dADl~~Aa~~i~~ 294 (528)
T 3u4j_A 218 DGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVF---ADADLDAAADGIAY 294 (528)
T ss_dssp TTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEEC---TTSCHHHHHHHHHH
T ss_pred CCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHhcCCceEEecCCCCeeEEC---CCCCHHHHHHHHHH
Confidence 999999999 778999999997 9999999999999999999999999999999999999999 99999999999999
Q ss_pred HhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCC
Q 011466 237 SKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGG 314 (485)
Q Consensus 237 ~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg 314 (485)
++| .|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||++++++++++.+++++ ..+|+++++||
T Consensus 295 ~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG 373 (528)
T 3u4j_A 295 GVY-HNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGG 373 (528)
T ss_dssp HHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHh-hcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCC
Confidence 999 99999999999999999999999999999999999999998 7899999999999999999999 56799999999
Q ss_pred CcCC--CCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcce
Q 011466 315 SVDE--ANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGS 392 (485)
Q Consensus 315 ~~~~--~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~ 392 (485)
.... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+
T Consensus 374 ~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~ 453 (528)
T 3u4j_A 374 ERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGR 453 (528)
T ss_dssp SEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSE
T ss_pred CcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeE
Confidence 7643 79999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeCC
Q 011466 393 IVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRSY 440 (485)
Q Consensus 393 v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 440 (485)
|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|+++..
T Consensus 454 V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 499 (528)
T 3u4j_A 454 CWINSVID--GTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLG 499 (528)
T ss_dssp EEESCCSC--CCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEESS
T ss_pred EEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeCC
Confidence 99999754 46889999999999999999999999999999998764
No 14
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=2.8e-96 Score=772.39 Aligned_cols=427 Identities=25% Similarity=0.397 Sum_probs=401.1
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++|+++|++||+.|+.+|..+|.++|+++++.|+++.++|++++++|+|||..+++ .|+..+++.+++++....++.
T Consensus 71 dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~ 149 (504)
T 3ek1_A 71 TIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAASFIEWFAEEAKRVY 149 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 7999999999999999999999999999999999999999999999999999999998 799999999999977665432
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
.. ... ....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|
T Consensus 150 g~-~~~--~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~g 226 (504)
T 3ek1_A 150 GD-TIP--APQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAG 226 (504)
T ss_dssp EE-EEC--CSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTT
T ss_pred Cc-ccc--cccccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcc
Confidence 21 111 1112346789999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHHh
Q 011466 161 AIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSK 238 (485)
Q Consensus 161 ~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~~ 238 (485)
++|+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.+++++||+++|||||||+||+ +|||++.|++.+++++
T Consensus 227 v~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~IV~---~dADl~~Aa~~i~~~~ 303 (504)
T 3ek1_A 227 VLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVF---DDADLDAAVDGAMVSK 303 (504)
T ss_dssp TEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCEEEEEC---TTSCHHHHHHHHHHHH
T ss_pred cEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCCeEecCCCCCeeEEc---CCCCHHHHHHHHHHHH
Confidence 9999998 578899999997 9999999999999999999999999999999999999999 9999999999999999
Q ss_pred ccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCCCc
Q 011466 239 YGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGGSV 316 (485)
Q Consensus 239 ~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg~~ 316 (485)
| .|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++.+++++.+++++ ..+|+++++||..
T Consensus 304 f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~ 382 (504)
T 3ek1_A 304 Y-RNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE 382 (504)
T ss_dssp H-GGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE
T ss_pred H-hcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc
Confidence 9 99999999999999999999999999999999999999998 8899999999999999999999 5679999999975
Q ss_pred CCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcceEEEc
Q 011466 317 DEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFN 396 (485)
Q Consensus 317 ~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN 396 (485)
.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||
T Consensus 383 -~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN 461 (504)
T 3ek1_A 383 -LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHN 461 (504)
T ss_dssp -EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEES
T ss_pred -CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEEC
Confidence 3689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeC
Q 011466 397 DAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 397 ~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 439 (485)
++.. ..+.+||||+|.||+|+++|++|+++||+.|+|+++.
T Consensus 462 ~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 462 TGLI--SNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp CSCC--CCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred CCCC--CCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence 8653 5688999999999999999999999999999998764
No 15
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=1.5e-95 Score=768.03 Aligned_cols=427 Identities=24% Similarity=0.380 Sum_probs=402.2
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..+++.++++++.++++.
T Consensus 59 dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~ 137 (503)
T 1a4s_A 59 EVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLS 137 (503)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999999999999999999999999999999997 799999999999988877654
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
. +..... .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|
T Consensus 138 g-~~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~g 213 (503)
T 1a4s_A 138 G-QHIQLP---GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVG 213 (503)
T ss_dssp E-EEEECG---GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTT
T ss_pred C-CcccCC---CCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcC
Confidence 3 221111 2346789999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeeccCChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHHhc
Q 011466 161 AIKVIEGGPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKY 239 (485)
Q Consensus 161 ~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~~~ 239 (485)
++|+|+|+.+.+++|++|+ ||+|+||||+.+|+.|++.+++++||+++|||||||+||+ +|||++.|++.+++++|
T Consensus 214 vv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~~~v~lELGGk~p~IV~---~dADl~~Aa~~i~~~~~ 290 (503)
T 1a4s_A 214 LVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIF---KDCELENAVRGALMANF 290 (503)
T ss_dssp SEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEEC---TTSCHHHHHHHHHHTTC
T ss_pred eEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceEEecCCcCeEEEC---CCCCHHHHHHHHHHHHH
Confidence 9999999338899999997 9999999999999999999999999999999999999999 99999999999999999
Q ss_pred cCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCCCcC
Q 011466 240 GPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGGSVD 317 (485)
Q Consensus 240 ~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg~~~ 317 (485)
.|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++++++++.+++++ ..+|+++++||...
T Consensus 291 -~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~ 369 (503)
T 1a4s_A 291 -LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPL 369 (503)
T ss_dssp -GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBC
T ss_pred -hcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccc
Confidence 99999999999999999999999999999999999999998 8999999999999999999998 45689999999764
Q ss_pred -------CCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCc
Q 011466 318 -------EANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSS 390 (485)
Q Consensus 318 -------~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~ 390 (485)
..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 370 ~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~a 449 (503)
T 1a4s_A 370 TPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEA 449 (503)
T ss_dssp CCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCS
T ss_pred ccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCce
Confidence 3589999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeC
Q 011466 391 GSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 391 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 439 (485)
|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+.+.
T Consensus 450 G~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 450 GTCYINTYSI--SPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp SEEEESCCCC--CCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred eEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEcc
Confidence 9999998764 4678999999999999999999999999999998864
No 16
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=3.2e-95 Score=763.82 Aligned_cols=423 Identities=25% Similarity=0.395 Sum_probs=397.6
Q ss_pred CcHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHH
Q 011466 1 MNLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEW 80 (485)
Q Consensus 1 ~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~ 80 (485)
.|+++|+++|++||+.|+.+|..+|.++|++++++|+++.++|++++++|+|||..+++..|+..+++.++++++.+..+
T Consensus 63 ~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~ 142 (497)
T 3i44_A 63 RDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEF 142 (497)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 37999999999999999999999999999999999999999999999999999999998679999999999998887765
Q ss_pred hccccccccccccCceeEEE-eecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cC
Q 011466 81 MSSKKAKLPAVAVLSYAEIV-PEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-ID 158 (485)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP 158 (485)
..+... ..+...++. ++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|
T Consensus 143 ~~~~~~-----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP 217 (497)
T 3i44_A 143 SFQEAL-----IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALP 217 (497)
T ss_dssp CSEEES-----STTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCC
T ss_pred cccccc-----cCCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcC
Confidence 432211 013346777 99999999999999999999999999999999999999999999999999999998 99
Q ss_pred cCceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHH
Q 011466 159 SKAIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIV 236 (485)
Q Consensus 159 ~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~ 236 (485)
+|++|+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.+++++||+++|||||||+||+ +||| +.|++.+++
T Consensus 218 ~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~---~dAD-~~Aa~~i~~ 293 (497)
T 3i44_A 218 SGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIF---ADAD-IDALQRGVR 293 (497)
T ss_dssp TTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEEC---TTSC-TTHHHHHHH
T ss_pred CCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceeeccCCCCceEEC---CChh-HHHHHHHHH
Confidence 999999999 678999999997 9999999999999999999999999999999999999999 9999 999999999
Q ss_pred HhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCC
Q 011466 237 SKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGG 314 (485)
Q Consensus 237 ~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg 314 (485)
++| .|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++.+++++.++|++ ..+|+++++||
T Consensus 294 ~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG 372 (497)
T 3i44_A 294 HCF-YNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGG 372 (497)
T ss_dssp HHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHH-hcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECC
Confidence 999 99999999999999999999999999999999999999998 8899999999999999999999 56799999999
Q ss_pred C-cC---CCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCc
Q 011466 315 S-VD---EANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSS 390 (485)
Q Consensus 315 ~-~~---~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~ 390 (485)
. .. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++
T Consensus 373 ~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~a 452 (497)
T 3i44_A 373 TGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRS 452 (497)
T ss_dssp SSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCC
T ss_pred CcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCc
Confidence 4 32 2699999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEE
Q 011466 391 GSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVV 436 (485)
Q Consensus 391 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~ 436 (485)
|+|+||. +...+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 453 G~V~iN~---~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 453 GMVEVNG---HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp SEEEETT---CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred CeEEECC---CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 9999995 234688999999999999999999999999999885
No 17
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=2e-95 Score=766.88 Aligned_cols=427 Identities=26% Similarity=0.379 Sum_probs=401.2
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++|+++|++||+.|+.+|..+|.++|+++++.|+++.++|++++++|+|||..+++ .|+..+++.++++++.++++.
T Consensus 50 dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~ 128 (505)
T 3prl_A 50 EVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAI-GEVSRTADIIRHTADEALRLN 128 (505)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999999999999999999999999999999998 799999999999999888765
Q ss_pred cccccccccccc---CceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-c
Q 011466 82 SSKKAKLPAVAV---LSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-I 157 (485)
Q Consensus 82 ~~~~~~~~~~~~---~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-l 157 (485)
.... +...... +...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++ +
T Consensus 129 g~~~-~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGl 207 (505)
T 3prl_A 129 GETL-KGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGA 207 (505)
T ss_dssp EEEE-EGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTC
T ss_pred Cccc-cccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCc
Confidence 4221 1110000 345788999999999999999999999999999999999999999999999999999999997 9
Q ss_pred CcCceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHH
Q 011466 158 DSKAIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRII 235 (485)
Q Consensus 158 P~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~ 235 (485)
|+|++|+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.++ +||+++|||||||+||+ +|||++.|++.++
T Consensus 208 P~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~---~dADl~~Aa~~i~ 282 (505)
T 3prl_A 208 PEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLELGGKDPAIVL---DDADLKLTASQIV 282 (505)
T ss_dssp CTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC--SSCEEEECCCCEEEEEC---TTCCHHHHHHHHH
T ss_pred CcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc--CCcEEEECCCCCCCccC---CCCCHHHHHHHHH
Confidence 9999999999 678899999997 999999999999999999987 89999999999999999 9999999999999
Q ss_pred HHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCC
Q 011466 236 VSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNSIARIINKHHFSRLKNLLND-PMVKDSIVYGG 314 (485)
Q Consensus 236 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg 314 (485)
+++| .|+||.|++++|||||++++|+|+++|+++++++++|||.+++++||++++++++++.+++++ ..+|+++++||
T Consensus 283 ~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG 361 (505)
T 3prl_A 283 SGAF-SYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGN 361 (505)
T ss_dssp HHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHH-hcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecC
Confidence 9999 999999999999999999999999999999999999999977899999999999999999999 56799999999
Q ss_pred CcCCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcceEE
Q 011466 315 SVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIV 394 (485)
Q Consensus 315 ~~~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~ 394 (485)
.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+
T Consensus 362 ~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~ 439 (505)
T 3prl_A 362 KR--QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVH 439 (505)
T ss_dssp CE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEE
T ss_pred CC--CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEE
Confidence 74 6899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeC
Q 011466 395 FNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 395 iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 439 (485)
||+++. ...+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 440 iN~~~~-~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~ 483 (505)
T 3prl_A 440 INAKTE-RGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNL 483 (505)
T ss_dssp ESSCCC-SCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred EcCCCC-CCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeC
Confidence 999765 34688999999999999999999999999999998875
No 18
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=2.3e-95 Score=765.65 Aligned_cols=428 Identities=27% Similarity=0.396 Sum_probs=403.5
Q ss_pred cHHHHHHHHHHHhH---hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHH
Q 011466 2 NLERDLQDMREYYR---SGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLK 78 (485)
Q Consensus 2 dv~~av~~A~~a~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~ 78 (485)
|+++++++|++||+ .|+.+|.++|.++|+++++.|+++.++|++++++|+|||..|+...|+..+++.++++++.++
T Consensus 59 ~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~ 138 (501)
T 1bxs_A 59 DVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWAD 138 (501)
T ss_dssp HHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999 899999999999999999999999999999999999999999866899999999999998887
Q ss_pred HHhccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-c
Q 011466 79 EWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-I 157 (485)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-l 157 (485)
++..... .. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++ +
T Consensus 139 ~~~g~~~-~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGl 214 (501)
T 1bxs_A 139 KIQGRTI-PM---DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGF 214 (501)
T ss_dssp GCCEEEE-CC---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTC
T ss_pred HhhCCee-ec---cCCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCC
Confidence 7654321 11 22346789999999999999999999999999999999999999999999999999999999998 9
Q ss_pred CcCceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHh-cccCceeeecCccCcEEEeCCCCCCcHHHHHHHH
Q 011466 158 DSKAIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAV-KHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRI 234 (485)
Q Consensus 158 P~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~-~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i 234 (485)
|+|++|+|+| +.+.+++|++|+ ||+|+||||+.+|+.|++.++ +++||+++|||||||+||+ +|||++.|++.+
T Consensus 215 P~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~---~dADl~~Aa~~i 291 (501)
T 1bxs_A 215 PPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVF---ADADLDNAVEFA 291 (501)
T ss_dssp CTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEEC---TTSCHHHHHHHH
T ss_pred CcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEEC---CCCCHHHHHHHH
Confidence 9999999999 778999999997 999999999999999999999 9999999999999999999 999999999999
Q ss_pred HHHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEee
Q 011466 235 IVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVY 312 (485)
Q Consensus 235 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~ 312 (485)
++++| .|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++.+++++.+++++ ..+|+++++
T Consensus 292 ~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~ 370 (501)
T 1bxs_A 292 HQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLEC 370 (501)
T ss_dssp HHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECS
T ss_pred HHHHH-hcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEe
Confidence 99999 99999999999999999999999999999999999999998 8899999999999999999998 467999999
Q ss_pred CCCcC-CCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcc
Q 011466 313 GGSVD-EANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSG 391 (485)
Q Consensus 313 gg~~~-~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g 391 (485)
||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|
T Consensus 371 gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG 450 (501)
T 1bxs_A 371 GGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSG 450 (501)
T ss_dssp CCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCS
T ss_pred CCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCee
Confidence 99763 36999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeC
Q 011466 392 SIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 392 ~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 439 (485)
+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus 451 ~V~iN~~~~--~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~~ 496 (501)
T 1bxs_A 451 TVWVNCYSV--VSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496 (501)
T ss_dssp EEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred EEEECCCCC--CCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEcc
Confidence 999998654 4578999999999999999999999999999998763
No 19
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=1e-95 Score=768.94 Aligned_cols=428 Identities=24% Similarity=0.365 Sum_probs=403.0
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.+|.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..+++.++++++.++++.
T Consensus 51 dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~ 129 (497)
T 3k2w_A 51 DAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIE 129 (497)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCC
T ss_pred HHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999999999999999999999999999999998 799999999999988777765
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
.... +. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|
T Consensus 130 ~~~~-~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~g 206 (497)
T 3k2w_A 130 GDIL-PS--DNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDG 206 (497)
T ss_dssp EEEE-EC--SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTT
T ss_pred Cccc-cc--CCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcC
Confidence 4321 11 123457889999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHHh
Q 011466 161 AIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSK 238 (485)
Q Consensus 161 ~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~~ 238 (485)
++|+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.+++++||+++|||||||+||+ +|||++.|++.+++++
T Consensus 207 vv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~---~dADl~~Aa~~i~~~~ 283 (497)
T 3k2w_A 207 VLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVM---DDADLDKAAEDALWGR 283 (497)
T ss_dssp SEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEECCCCEEEEEC---TTCCHHHHHHHHHHHH
T ss_pred eEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEEcCCCCceEEc---CCCCHHHHHHHHHHHH
Confidence 9999999 678999999998 9999999999999999999999999999999999999999 9999999999999999
Q ss_pred ccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCCCc
Q 011466 239 YGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGGSV 316 (485)
Q Consensus 239 ~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg~~ 316 (485)
| .|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||++++++++++.+++++ ..+|+++++||..
T Consensus 284 ~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~ 362 (497)
T 3k2w_A 284 F-ANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKT 362 (497)
T ss_dssp H-GGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC-
T ss_pred H-hCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCcc
Confidence 9 99999999999999999999999999999999999999998 8899999999999999999999 4678999999973
Q ss_pred --C-C--CCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcc
Q 011466 317 --D-E--ANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSG 391 (485)
Q Consensus 317 --~-~--~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g 391 (485)
. . .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|
T Consensus 363 ~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG 442 (497)
T 3k2w_A 363 ATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVG 442 (497)
T ss_dssp --------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSS
T ss_pred CCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCee
Confidence 2 2 6899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeC
Q 011466 392 SIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 392 ~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 439 (485)
+|+||+++.+ .+.+||||+|.||+|+++|++|+++||+.|+|+++.
T Consensus 443 ~v~vN~~~~~--~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 488 (497)
T 3k2w_A 443 EVYINRGMGE--QHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINE 488 (497)
T ss_dssp EEEESCCSCC--CTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred EEEEcCCCCC--CCCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEc
Confidence 9999998764 488999999999999999999999999999998875
No 20
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=6.9e-96 Score=771.72 Aligned_cols=431 Identities=23% Similarity=0.326 Sum_probs=401.1
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHH--
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKE-- 79 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~-- 79 (485)
|+++|+++|++||+.|+.+|.++|.++|+++++.|+++.++|++++++|+|||..++ |+..+++.++++++..+.
T Consensus 53 dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~ 129 (517)
T 3r31_A 53 IVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAP 129 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhcc
Confidence 789999999999999999999999999999999999999999999999999999988 899999999999887766
Q ss_pred -HhccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-c
Q 011466 80 -WMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-I 157 (485)
Q Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-l 157 (485)
+..++.... ..+. .+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +
T Consensus 130 ~~~~g~~~~~---~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGl 205 (517)
T 3r31_A 130 SALNGDYIPL---GGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGL 205 (517)
T ss_dssp HHTCCCEEEC---SSSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTC
T ss_pred ccccCccccc---CCCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCc
Confidence 233322111 1234 899999999999999999999999999999999999999999999999999999999998 9
Q ss_pred CcCceeeccCChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHH
Q 011466 158 DSKAIKVIEGGPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIV 236 (485)
Q Consensus 158 P~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~ 236 (485)
|+|++|+|+|+.+.+++|++|+ ||+|+||||+++|+.|++.+++++||+++|||||||+||+ +|||++.|++.+++
T Consensus 206 P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~---~dADl~~Aa~~i~~ 282 (517)
T 3r31_A 206 PKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVF---DDADIESAVGGAML 282 (517)
T ss_dssp CTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEEC---TTSCHHHHHHHHHH
T ss_pred CcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEe---cCCCHHHHHHHHHH
Confidence 9999999999888999999997 9999999999999999999999999999999999999999 99999999999999
Q ss_pred HhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCC
Q 011466 237 SKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGG 314 (485)
Q Consensus 237 ~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg 314 (485)
++| .|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||++++++++++.++|++ ..+|+++++||
T Consensus 283 ~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG 361 (517)
T 3r31_A 283 GNF-YSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG 361 (517)
T ss_dssp HHT-SCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC
T ss_pred HHh-cCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC
Confidence 999 99999999999999999999999999999999999999998 8899999999999999999999 46799999999
Q ss_pred C-cC---CCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCc
Q 011466 315 S-VD---EANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSS 390 (485)
Q Consensus 315 ~-~~---~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~ 390 (485)
. .+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++
T Consensus 362 ~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~a 441 (517)
T 3r31_A 362 GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEA 441 (517)
T ss_dssp SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCC
T ss_pred ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCc
Confidence 3 11 3699999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeCCCCccc
Q 011466 391 GSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRSYLSEIW 445 (485)
Q Consensus 391 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~~~ 445 (485)
|+|+||+... ..+.+||||+|.||+|+++|++|+++||+.|+|+++....+.+
T Consensus 442 G~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~~~~ 494 (517)
T 3r31_A 442 GTLWINTYNL--CPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTGKVDAP 494 (517)
T ss_dssp SEEEESSCCC--CCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEECCC-----
T ss_pred ceEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEcCCCCCCC
Confidence 9999999653 5688999999999999999999999999999999886544333
No 21
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=1.5e-95 Score=766.86 Aligned_cols=428 Identities=26% Similarity=0.395 Sum_probs=403.5
Q ss_pred cHHHHHHHHHHHhH---hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHH
Q 011466 2 NLERDLQDMREYYR---SGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLK 78 (485)
Q Consensus 2 dv~~av~~A~~a~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~ 78 (485)
|+++++++|++||+ .|+.+|.++|.++|+++++.|+++.++|++++++|+|||..++...|+..+++.++++++.++
T Consensus 58 ~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~ 137 (500)
T 1o04_A 58 DVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWAD 137 (500)
T ss_dssp HHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999 899999999999999999999999999999999999999999866899999999999998887
Q ss_pred HHhccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-c
Q 011466 79 EWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-I 157 (485)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-l 157 (485)
++..... +. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +
T Consensus 138 ~~~g~~~-~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGl 213 (500)
T 1o04_A 138 KYHGKTI-PI---DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGF 213 (500)
T ss_dssp TCCEEEE-CC---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTC
T ss_pred HhhCcce-ec---CCCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCC
Confidence 7654321 11 22345789999999999999999999999999999999999999999999999999999999998 9
Q ss_pred CcCceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHh-cccCceeeecCccCcEEEeCCCCCCcHHHHHHHH
Q 011466 158 DSKAIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAV-KHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRI 234 (485)
Q Consensus 158 P~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~-~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i 234 (485)
|+|++|+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.++ +++||+++|||||||+||+ +|||++.|++.+
T Consensus 214 P~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~---~dADl~~Aa~~i 290 (500)
T 1o04_A 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIM---SDADMDWAVEQA 290 (500)
T ss_dssp CTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEEC---TTSCHHHHHHHH
T ss_pred CcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEEC---CCCCHHHHHHHH
Confidence 9999999999 778999999997 999999999999999999999 9999999999999999999 999999999999
Q ss_pred HHHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEee
Q 011466 235 IVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVY 312 (485)
Q Consensus 235 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~ 312 (485)
++++| .|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++.+++++.+++++ ..+|+++++
T Consensus 291 ~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~ 369 (500)
T 1o04_A 291 HFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLC 369 (500)
T ss_dssp HHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHh-ccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEe
Confidence 99999 99999999999999999999999999999999999999998 8899999999999999999998 467999999
Q ss_pred CCCcC-CCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcc
Q 011466 313 GGSVD-EANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSG 391 (485)
Q Consensus 313 gg~~~-~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g 391 (485)
||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 370 gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG 449 (500)
T 1o04_A 370 GGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAG 449 (500)
T ss_dssp CCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSS
T ss_pred CCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCee
Confidence 99764 36999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeC
Q 011466 392 SIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 392 ~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 439 (485)
+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus 450 ~V~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~~ 495 (500)
T 1o04_A 450 TVWVNCYDV--FGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 495 (500)
T ss_dssp EEEESCSSC--CCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEEC
T ss_pred EEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEec
Confidence 999998754 4578999999999999999999999999999998763
No 22
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=3.5e-95 Score=761.59 Aligned_cols=421 Identities=26% Similarity=0.397 Sum_probs=398.6
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.+|.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..+++.++++++.++++.
T Consensus 35 ~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~ 113 (486)
T 3pqa_A 35 EAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHR 113 (486)
T ss_dssp HHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999999999999999999999999999999998 799999999999999988865
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-----
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY----- 156 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a----- 156 (485)
.... +. .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++
T Consensus 114 ~~~~-~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G 188 (486)
T 3pqa_A 114 DEVI-PS----DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYN 188 (486)
T ss_dssp EEEE-CC----TTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTT
T ss_pred Ccee-cC----CCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcC
Confidence 4321 11 1457899999999999999999999999999999999999999999999999999999999887
Q ss_pred cCcCceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHH
Q 011466 157 IDSKAIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRI 234 (485)
Q Consensus 157 lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i 234 (485)
+|+|++|+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.++ +||+++|||||||+||+ +|||++.|++.+
T Consensus 189 lP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~~v~lELGGk~p~iV~---~dADl~~Aa~~i 263 (486)
T 3pqa_A 189 VPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVNPNIVL---KDADLNKAVNAL 263 (486)
T ss_dssp CCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SSEEEEECCCCEEEEEC---TTSCHHHHHHHH
T ss_pred CCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CCceeeccCCcCcEEEc---CCCCHHHHHHHH
Confidence 99999999999 566799999997 999999999999999999887 89999999999999999 999999999999
Q ss_pred HHHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEee
Q 011466 235 IVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVY 312 (485)
Q Consensus 235 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~ 312 (485)
++++| .|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++++++++.+++++ ..+|+++++
T Consensus 264 ~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~ 342 (486)
T 3pqa_A 264 IKGSF-IYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLL 342 (486)
T ss_dssp HHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHH-hcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 99999 99999999999999999999999999999999999999998 8899999999999999999998 567999999
Q ss_pred CCCcCCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcce
Q 011466 313 GGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGS 392 (485)
Q Consensus 313 gg~~~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~ 392 (485)
||.. .|+|++|||+ +++++|++++||+||||++|++|+| ||||+++|+++|||++||||+|.+.++++++++++|+
T Consensus 343 gG~~--~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~ 418 (486)
T 3pqa_A 343 GGKR--DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGG 418 (486)
T ss_dssp CCCE--ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSE
T ss_pred cCCC--CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcce
Confidence 9965 5899999999 9999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred EEEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeC
Q 011466 393 IVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 393 v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 439 (485)
|+||+++.+ ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 419 v~vN~~~~~-~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~ 464 (486)
T 3pqa_A 419 VVINDSSLF-RQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISK 464 (486)
T ss_dssp EEESSCTTC-CCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred EEEeCCCCc-CCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcC
Confidence 999998654 3458999999999999999999999999999999875
No 23
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.3e-95 Score=765.27 Aligned_cols=427 Identities=25% Similarity=0.359 Sum_probs=402.0
Q ss_pred cHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHH
Q 011466 2 NLERDLQDMREYYR--SGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKE 79 (485)
Q Consensus 2 dv~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~ 79 (485)
|+++++++|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..+++.++++++.+++
T Consensus 47 ~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~ 126 (495)
T 3b4w_A 47 DVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADK 126 (495)
T ss_dssp HHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGG
T ss_pred HHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999 9999999999999999999999999999999999999999999757999999999999887766
Q ss_pred HhccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cC
Q 011466 80 WMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-ID 158 (485)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP 158 (485)
+.... .+ ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++.++ +|
T Consensus 127 ~~g~~-~~---~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP 202 (495)
T 3b4w_A 127 VTWTE-TR---TGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLP 202 (495)
T ss_dssp SCSEE-EE---EETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCC
T ss_pred hcCCc-cc---CCCCceEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCC
Confidence 54322 11 112336789999999999999999999999999999999999999999999999999999999998 99
Q ss_pred cCceeeccCChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHH
Q 011466 159 SKAIKVIEGGPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVS 237 (485)
Q Consensus 159 ~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~ 237 (485)
+|++|+|+|+.+.+++|++|+ ||+|+||||+++|+.|++.+++++||+++|||||||+||+ +|||++.|++.++++
T Consensus 203 ~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~pv~lELGGk~p~iV~---~dADl~~Aa~~i~~~ 279 (495)
T 3b4w_A 203 EGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIIL---EDVDLAAAIPMMVFS 279 (495)
T ss_dssp TTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEEC---TTCCHHHHHHHHHHH
T ss_pred cCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceeecCCCcceEEEC---CCCCHHHHHHHHHHH
Confidence 999999999778999999996 9999999999999999999999999999999999999999 999999999999999
Q ss_pred hccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCCC
Q 011466 238 KYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGGS 315 (485)
Q Consensus 238 ~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg~ 315 (485)
+| .|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++++++++.+++++ ..+|+++++||.
T Consensus 280 ~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~ 358 (495)
T 3b4w_A 280 GV-MNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGG 358 (495)
T ss_dssp HH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCS
T ss_pred Hh-hcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCc
Confidence 99 99999999999999999999999999999999999999998 8899999999999999999998 467899999997
Q ss_pred cCC---CCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcce
Q 011466 316 VDE---ANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGS 392 (485)
Q Consensus 316 ~~~---~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~ 392 (485)
... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+
T Consensus 359 ~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~ 438 (495)
T 3b4w_A 359 RPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGT 438 (495)
T ss_dssp CCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSC
T ss_pred ccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeE
Confidence 643 69999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeC
Q 011466 393 IVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 393 v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 439 (485)
|+||++. ..+.+||||+|.||+|+++|.+|+++||+.|+|+.+.
T Consensus 439 V~iN~~~---~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~~ 482 (495)
T 3b4w_A 439 YGINWYA---FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPM 482 (495)
T ss_dssp CEESSCC---CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECCT
T ss_pred EEECCCC---CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEcc
Confidence 9999864 4688999999999999999999999999999998763
No 24
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.4e-95 Score=766.26 Aligned_cols=429 Identities=20% Similarity=0.263 Sum_probs=401.5
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.++..+|.++|+++++.|+++.++|++++++|+|||..+++ .|+..+++.++++++... +.
T Consensus 65 dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~-~~ 142 (521)
T 4e4g_A 65 DLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPH-LQ 142 (521)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHHHHHHHHHTHHH-HT
T ss_pred HHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHH-Hh
Confidence 7899999999999999999999999999999999999999999999999999999998 799999999999987543 33
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
.+.... ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|
T Consensus 143 ~~~~~~--~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~g 220 (521)
T 4e4g_A 143 KSEFTE--GAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAG 220 (521)
T ss_dssp CEEEEE--EEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTT
T ss_pred cCcccc--cCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcC
Confidence 333211 1122346789999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeeccCChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHHhc
Q 011466 161 AIKVIEGGPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKY 239 (485)
Q Consensus 161 ~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~~~ 239 (485)
++|+|+|+.+.+++|++|+ ||+|+||||+.+|+.|++.+++++||+++|||||||+||+ +|||++.|++.+++++|
T Consensus 221 vv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~---~dADl~~Aa~~i~~~~f 297 (521)
T 4e4g_A 221 ILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIM---PDADLDQAANALIGAGY 297 (521)
T ss_dssp SEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEEC---TTSCHHHHHHHHHHHHH
T ss_pred eEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEc---CCCCHHHHHHHHHHHHH
Confidence 9999999888889999997 9999999999999999999999999999999999999999 99999999999999999
Q ss_pred cCCCCCccccCCEEEEeCC-cHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCCCc
Q 011466 240 GPCAGQACIAIDYLLVEEK-FTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGGSV 316 (485)
Q Consensus 240 ~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg~~ 316 (485)
.|+||.|++++|||||++ ++|+|+++|+++++++++|+|.+ ++++||++++++++++.+++++ ..+|+++++||..
T Consensus 298 -~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~ 376 (521)
T 4e4g_A 298 -GSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRD 376 (521)
T ss_dssp -GGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSS
T ss_pred -hCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcc
Confidence 999999999999999999 99999999999999999999988 8899999999999999999999 4679999999964
Q ss_pred -----CCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcc
Q 011466 317 -----DEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSG 391 (485)
Q Consensus 317 -----~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g 391 (485)
+.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 377 ~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG 456 (521)
T 4e4g_A 377 FKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIG 456 (521)
T ss_dssp CCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCS
T ss_pred cCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCee
Confidence 246999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEcCccccccCCCCCcccCCCCCCC--CcchHHHHHHhhccccEEEeC
Q 011466 392 SIVFNDAVIQFVADTLPFGGIGESGIG--SYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 392 ~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~~t~~k~v~~~~ 439 (485)
+|+||++.. ...+.+||||+|.||+| +++|++|+++||+.|+|+.+.
T Consensus 457 ~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 505 (521)
T 4e4g_A 457 MVGVNVPIP-VPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRW 505 (521)
T ss_dssp EEEESCSSC-CCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEECC
T ss_pred eEEECCCCC-CCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEec
Confidence 999998753 34578999999999999 799999999999999999864
No 25
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=7.1e-95 Score=760.34 Aligned_cols=427 Identities=24% Similarity=0.361 Sum_probs=401.1
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+++.++++++.++++.
T Consensus 45 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~ 123 (479)
T 2imp_A 45 DARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYE 123 (479)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCC
T ss_pred HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 7899999999999999999999999999999999999999999999999999999998 899999999999987766654
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
.... +. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|
T Consensus 124 ~~~~-~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~g 200 (479)
T 2imp_A 124 GEII-QS--DRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRG 200 (479)
T ss_dssp CEEE-CC--SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTT
T ss_pred CCcc-cc--CCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcC
Confidence 3321 11 112346789999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHHh
Q 011466 161 AIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSK 238 (485)
Q Consensus 161 ~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~~ 238 (485)
++|+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.+++++||+++|||||||+||+ +|||++.|++.+++++
T Consensus 201 vv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~---~dADl~~aa~~i~~~~ 277 (479)
T 2imp_A 201 VFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVM---DDADLELAVKAIVDSR 277 (479)
T ss_dssp SEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEEC---TTSCHHHHHHHHHTTS
T ss_pred eEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEEcCCcCeEEEC---CCCCHHHHHHHHHHHH
Confidence 9999999 557899999996 9999999999999999999999999999999999999999 9999999999999999
Q ss_pred ccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC--CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCCC
Q 011466 239 YGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK--SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGGS 315 (485)
Q Consensus 239 ~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~--~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg~ 315 (485)
| .|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.+++++ ..+|+++++||.
T Consensus 278 ~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~ 356 (479)
T 2imp_A 278 V-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGK 356 (479)
T ss_dssp S-TTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred h-hcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCc
Confidence 9 99999999999999999999999999999999999999987 7899999999999999999998 467999999997
Q ss_pred c-CCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcceEE
Q 011466 316 V-DEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIV 394 (485)
Q Consensus 316 ~-~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~ 394 (485)
. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+
T Consensus 357 ~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~ 436 (479)
T 2imp_A 357 AVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETY 436 (479)
T ss_dssp CCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEE
T ss_pred ccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEE
Confidence 5 336899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEe
Q 011466 395 FNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRR 438 (485)
Q Consensus 395 iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 438 (485)
||++..+ .+.+||||+|.||+|+++|.+|+++||+.|+|+.+
T Consensus 437 iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 437 INRENFE--AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp ESSCCCC--CTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred ECCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 9987654 58899999999999999999999999999999875
No 26
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.3e-94 Score=763.09 Aligned_cols=427 Identities=26% Similarity=0.382 Sum_probs=401.5
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.+|.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..+++.++++++.++++.
T Consensus 65 dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~ 143 (515)
T 2d4e_A 65 EVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAM 143 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTT
T ss_pred HHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999999999999999999999999999999998 899999999999987776654
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
.. ..+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|
T Consensus 144 g~-~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~g 220 (515)
T 2d4e_A 144 ED-RTFP--VDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPG 220 (515)
T ss_dssp CE-EECC--BTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTT
T ss_pred Cc-cccc--CCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcC
Confidence 32 1111 012346789999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHHh
Q 011466 161 AIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSK 238 (485)
Q Consensus 161 ~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~~ 238 (485)
++|+|+| +.+.+++|++|+ ||+|+||||+.+|+.|++.+++++||+++|||||||+||+ +|||++.|++.+++++
T Consensus 221 vv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~v~lELGGk~p~iV~---~dADl~~Aa~~i~~~~ 297 (515)
T 2d4e_A 221 VFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVF---ADADLERALDAVVFQI 297 (515)
T ss_dssp SEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEEC---TTSCHHHHHHHHHHHH
T ss_pred eEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceEecCCCcCeEEEc---CCCCHHHHHHHHHHHH
Confidence 9999999 568899999996 9999999999999999999999999999999999999999 9999999999999999
Q ss_pred ccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCCCc
Q 011466 239 YGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGGSV 316 (485)
Q Consensus 239 ~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg~~ 316 (485)
| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++++++++.++|++ ..+|+++++||..
T Consensus 298 ~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~ 376 (515)
T 2d4e_A 298 F-SFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGER 376 (515)
T ss_dssp H-GGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSB
T ss_pred H-hcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcc
Confidence 9 99999999999999999999999999999999999999998 7899999999999999999998 5679999999976
Q ss_pred CC---------CCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhh
Q 011466 317 DE---------ANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSE 387 (485)
Q Consensus 317 ~~---------~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~ 387 (485)
.. .|+|++|||+.+ +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++
T Consensus 377 ~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~ 455 (515)
T 2d4e_A 377 AKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALE 455 (515)
T ss_dssp CCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHH
T ss_pred ccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHh
Confidence 43 699999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cCcceEEEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeC
Q 011466 388 TSSGSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 388 ~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 439 (485)
+++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus 456 l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~ 505 (515)
T 2d4e_A 456 LEAGMVYLNSHNV--RHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPL 505 (515)
T ss_dssp SCSSEEEESSSCC--CCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEES
T ss_pred CCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcC
Confidence 9999999998654 5688999999999999999999999999999998874
No 27
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=1.9e-94 Score=754.86 Aligned_cols=427 Identities=21% Similarity=0.321 Sum_probs=405.1
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.+|.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..+++.++++++....+.
T Consensus 30 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~ 108 (462)
T 3etf_A 30 EIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQAR-AEVTKSAALCDWYAEHGPAML 108 (462)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHhHHHhc
Confidence 7899999999999999999999999999999999999999999999999999999998 799999999999998888776
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
.... ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|
T Consensus 109 ~~~~----~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~g 184 (462)
T 3etf_A 109 NPEP----TLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAG 184 (462)
T ss_dssp SCEE----CSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCBT
T ss_pred CCcc----cCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcC
Confidence 4431 1122446789999999999999999999999999999999999999999999999999999999997 9999
Q ss_pred ceeeccCChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHHhc
Q 011466 161 AIKVIEGGPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKY 239 (485)
Q Consensus 161 ~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~~~ 239 (485)
++|+|+|+.+.+.+|++|+ ++.|+||||+++|+.|++.++++++|+++|+|||||+||+ +|||++.|++.+++++|
T Consensus 185 v~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~---~dADl~~Aa~~i~~~~~ 261 (462)
T 3etf_A 185 VYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVL---NDADLELAVKAAVAGRY 261 (462)
T ss_dssp TEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEEC---TTSCHHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEEC---CCCCHHHHHHHHHHHHH
Confidence 9999999888899999997 9999999999999999999999999999999999999999 99999999999999999
Q ss_pred cCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCCCc-
Q 011466 240 GPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGGSV- 316 (485)
Q Consensus 240 ~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg~~- 316 (485)
+|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.+++++ ..+|+++++||..
T Consensus 262 -~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~ 340 (462)
T 3etf_A 262 -QNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKI 340 (462)
T ss_dssp -GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC
T ss_pred -hcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccc
Confidence 99999999999999999999999999999999999999998 8899999999999999999999 5679999999974
Q ss_pred CCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcceEEEc
Q 011466 317 DEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFN 396 (485)
Q Consensus 317 ~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN 396 (485)
+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||
T Consensus 341 ~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN 420 (462)
T 3etf_A 341 AGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFIN 420 (462)
T ss_dssp SSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEES
T ss_pred CCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeC
Q 011466 397 DAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 397 ~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 439 (485)
++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|++++
T Consensus 421 ~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 421 GYSA--SDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp SCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred CCCC--CCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 9754 4688999999999999999999999999999998764
No 28
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=1.7e-94 Score=757.80 Aligned_cols=427 Identities=26% Similarity=0.398 Sum_probs=400.7
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.+|.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..+++.+++++....+..
T Consensus 48 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~ 126 (481)
T 3jz4_A 48 ETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIY 126 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999999999999999999999999999999998 799999999999876554422
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
. .... ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|
T Consensus 127 ~-~~~~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~g 203 (481)
T 3jz4_A 127 G-DTIP--GHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAG 203 (481)
T ss_dssp E-EEEC--CSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTT
T ss_pred C-cccc--ccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCC
Confidence 1 1111 1122446789999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHHh
Q 011466 161 AIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSK 238 (485)
Q Consensus 161 ~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~~ 238 (485)
++|+|+| +.+.+++|++|+ ||+|+||||+.+|+.|++.++++++|+++|+|||||+||+ +|||++.|++.+++++
T Consensus 204 vv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~---~dADl~~Aa~~i~~~~ 280 (481)
T 3jz4_A 204 VFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVF---DDADLDKAVEGALASK 280 (481)
T ss_dssp TEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTTCEEEEECCCCEEEEEC---TTSCHHHHHHHHHHHH
T ss_pred eEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeEEEc---CCCCHHHHHHHHHHHH
Confidence 9999999 678999999997 9999999999999999999999999999999999999999 9999999999999999
Q ss_pred ccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCCCc
Q 011466 239 YGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGGSV 316 (485)
Q Consensus 239 ~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg~~ 316 (485)
| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.+++++ ..+|+++++||..
T Consensus 281 ~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~ 359 (481)
T 3jz4_A 281 F-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA 359 (481)
T ss_dssp H-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSB
T ss_pred H-HhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc
Confidence 9 99999999999999999999999999999999999999998 8899999999999999999999 5679999999976
Q ss_pred -CCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcceEEE
Q 011466 317 -DEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVF 395 (485)
Q Consensus 317 -~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~i 395 (485)
+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+|
T Consensus 360 ~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~i 439 (481)
T 3jz4_A 360 HERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGI 439 (481)
T ss_dssp CTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEE
T ss_pred cCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEE
Confidence 4468999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEe
Q 011466 396 NDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRR 438 (485)
Q Consensus 396 N~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 438 (485)
|++.. ..+.+||||+|.||+|+++|++|+++||+.|+|++.
T Consensus 440 N~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 440 NTGII--SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp SCSCC--CCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCCC--CCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 99764 468899999999999999999999999999999864
No 29
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=4.8e-94 Score=759.48 Aligned_cols=428 Identities=24% Similarity=0.363 Sum_probs=400.8
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.+|.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..+++.++++++.++++.
T Consensus 75 ~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~ 153 (516)
T 1uzb_A 75 EAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYR 153 (516)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999999999999999999999999999999998 899999999999999888776
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
.+... . ....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++ +|+|
T Consensus 154 ~~~~~-~-~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~g 231 (516)
T 1uzb_A 154 YPAVE-V-VPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPG 231 (516)
T ss_dssp SSCCC-C-CCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTT
T ss_pred CCccc-c-cCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcC
Confidence 43311 0 1112346789999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHh------cccCceeeecCccCcEEEeCCCCCCcHHHHHH
Q 011466 161 AIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAV------KHLTPITLELGGKCPAIIDSLTSSWDKEAAVK 232 (485)
Q Consensus 161 ~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~------~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~ 232 (485)
++|+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.++ +++||+++|||||||+||+ +|||++.|++
T Consensus 232 vv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~---~dADl~~Aa~ 308 (516)
T 1uzb_A 232 VVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVD---ETADFDLAAE 308 (516)
T ss_dssp SEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEEC---TTSCHHHHHH
T ss_pred eEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeEC---CCCCHHHHHH
Confidence 9999999 778899999997 999999999999999999998 7899999999999999999 9999999999
Q ss_pred HHHHHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcCc-cCCCeE
Q 011466 233 RIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLNDP-MVKDSI 310 (485)
Q Consensus 233 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~~-~~g~~~ 310 (485)
.+++++| .|+||.|++++|||||++++|+|+++|+++++++++||| + ++++||++++.+++++.++++++ .+| ++
T Consensus 309 ~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v 385 (516)
T 1uzb_A 309 GVVVSAY-GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QL 385 (516)
T ss_dssp HHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EE
T ss_pred HHHHHHH-hCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CE
Confidence 9999999 999999999999999999999999999999999999999 6 89999999999999999999984 456 89
Q ss_pred eeCCCc-CCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcC
Q 011466 311 VYGGSV-DEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETS 389 (485)
Q Consensus 311 ~~gg~~-~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~ 389 (485)
++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++++++
T Consensus 386 ~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~ 465 (516)
T 1uzb_A 386 VLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFH 465 (516)
T ss_dssp EECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSC
T ss_pred EECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCC
Confidence 999976 3469999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEcCccccccCCCCCcccCCCCCCCC-cchHHHHHHhhccccEEEe
Q 011466 390 SGSIVFNDAVIQFVADTLPFGGIGESGIGS-YHGKFSFDAFSHHKPVVRR 438 (485)
Q Consensus 390 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~l~~~t~~k~v~~~ 438 (485)
+|+|+||+++.+...+.+||||+|.||+|+ ++|.+++++||+.|+|+++
T Consensus 466 aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 466 VGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp CSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred EeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence 999999997666567889999999999995 6899999999999999764
No 30
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=1.6e-94 Score=758.04 Aligned_cols=427 Identities=26% Similarity=0.390 Sum_probs=401.1
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.+|.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..+++.++++++.++++.
T Consensus 49 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~ 127 (487)
T 2w8n_A 49 EARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVY 127 (487)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999999999999999999999999999999998 799999999999987765532
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
++.... ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|
T Consensus 128 -g~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~g 204 (487)
T 2w8n_A 128 -GDIIHT--PAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSG 204 (487)
T ss_dssp -CEEECC--SCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTT
T ss_pred -Cccccc--CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCC
Confidence 222111 112446789999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeecc---C-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHH
Q 011466 161 AIKVIE---G-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRII 235 (485)
Q Consensus 161 ~v~vv~---g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~ 235 (485)
++|+|+ | +.+.+++|++|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||+ +|||++.|++.++
T Consensus 205 vv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~---~dADl~~Aa~~i~ 281 (487)
T 2w8n_A 205 VYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVF---DSANVDQAVAGAM 281 (487)
T ss_dssp SEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTTTCEEEEEECEEEEEEEC---TTSCHHHHHHHHH
T ss_pred eEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEecCCCCeEEEC---CCCCHHHHHHHHH
Confidence 999999 8 677899999997 9999999999999999999999999999999999999999 9999999999999
Q ss_pred HHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHh-hcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEee
Q 011466 236 VSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKK-MLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVY 312 (485)
Q Consensus 236 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~ 312 (485)
+++| .|+||.|++++|||||++++|+|+++|++++++ +++|||.+ ++++||++++.+++++.+++++ ..+|+++++
T Consensus 282 ~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~ 360 (487)
T 2w8n_A 282 ASKF-RNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVT 360 (487)
T ss_dssp HHHT-CCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHH-hCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 9999 999999999999999999999999999999999 99999998 8899999999999999999999 467899999
Q ss_pred CCCcCCCCc-eeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcc
Q 011466 313 GGSVDEANL-FIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSG 391 (485)
Q Consensus 313 gg~~~~~g~-~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g 391 (485)
||..+..|+ |++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|
T Consensus 361 gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG 440 (487)
T 2w8n_A 361 GGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVG 440 (487)
T ss_dssp CCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSS
T ss_pred CCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCee
Confidence 998655688 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEe
Q 011466 392 SIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRR 438 (485)
Q Consensus 392 ~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 438 (485)
+|+||++..+ .+.+||||+|.||+|+++|.+|+++||+.|+|+.+
T Consensus 441 ~v~vN~~~~~--~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 441 MVGVNEGLIS--SVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp EEEESCSCCC--CTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred eEEEcCCCCC--CCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 9999997654 46799999999999999999999999999999875
No 31
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=4.2e-94 Score=753.56 Aligned_cols=436 Identities=26% Similarity=0.342 Sum_probs=406.1
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++|+++|++||+.|+++|.++|.++|++++++|++++++|++++++|+||+.. +. .|+..++..+++++....++.
T Consensus 29 ~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-~~-~ev~~~~~~~~~~~~~~~~~~ 106 (474)
T 4h7n_A 29 LLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSI-TV-LEIDSFLASIDRWCGLAPELL 106 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSHH-HH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH-HH-HHHHHHHHHHHHHHhhhhhcc
Confidence 7899999999999999999999999999999999999999999999999999864 44 699999999999988888776
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
+....... ..+......++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+.+++.++ +|+|
T Consensus 107 ~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ag~p~g 184 (474)
T 4h7n_A 107 QTSAKNTS--IPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTVPELRD 184 (474)
T ss_dssp CCEEEECS--STTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTCTTTTT
T ss_pred cccccCCC--CCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHHHHHhhhhhhccccc
Confidence 55432211 12235677889999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeeccCChhHHHhHhhCCCCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHHhcc
Q 011466 161 AIKVIEGGPAVGEHLLQQKWDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKYG 240 (485)
Q Consensus 161 ~v~vv~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~~~~ 240 (485)
++|+++|+.+.+..|+.| +|+|+||||+.+|+.|++.+++++||+++|||||||+||+ +|||++.|++.+++++|
T Consensus 185 v~~~v~g~~~~~~~l~~~-v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~---~dAdl~~aa~~i~~~~~- 259 (474)
T 4h7n_A 185 VLIFVEGGGETGANLINY-VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVL---ESANLELATSAILWGAV- 259 (474)
T ss_dssp TEEECCCCHHHHHHHHTT-CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEEC---TTSCHHHHHHHHHHHHH-
T ss_pred ceeeccccchhhhhhhhc-cceEEeccccchhhhhhhhhhcccccccccCCCcCccccC---chhhHHHHHHHHHhhhc-
Confidence 999999999999999977 9999999999999999999999999999999999999999 99999999999999999
Q ss_pred CCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCCCcC-
Q 011466 241 PCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGGSVD- 317 (485)
Q Consensus 241 ~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg~~~- 317 (485)
+|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.+++++ ..+|++++.||..+
T Consensus 260 ~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~ 339 (474)
T 4h7n_A 260 VNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEE 339 (474)
T ss_dssp GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEE
T ss_pred cCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccc
Confidence 99999999999999999999999999999999999999998 8899999999999999999999 56799999999764
Q ss_pred -CCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcceEEEc
Q 011466 318 -EANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVFN 396 (485)
Q Consensus 318 -~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN 396 (485)
.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||
T Consensus 340 ~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN 419 (474)
T 4h7n_A 340 LGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISIN 419 (474)
T ss_dssp ETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEES
T ss_pred cCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEC
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCcccCCCCCCC-CcchHHHHHHhhccccEEEeCCCCcccc
Q 011466 397 DAVIQFVADTLPFGGIGESGIG-SYHGKFSFDAFSHHKPVVRRSYLSEIWF 446 (485)
Q Consensus 397 ~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~t~~k~v~~~~~~~~~~~ 446 (485)
+.+.+...+.+||||+|.||+| +++|.+|+++|++.|+|+++....+.+|
T Consensus 420 ~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~ 470 (474)
T 4h7n_A 420 DAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPW 470 (474)
T ss_dssp SSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTT
T ss_pred CCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCC
Confidence 9887777789999999999998 8899999999999999999875444444
No 32
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=6.8e-94 Score=755.54 Aligned_cols=428 Identities=21% Similarity=0.261 Sum_probs=397.1
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.++++++.++++.
T Consensus 60 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~ 138 (500)
T 2j6l_A 60 DYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIG 138 (500)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999999999999999999999999999999996 899999999999987765543
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHccc----c-
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPT----Y- 156 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~----a- 156 (485)
.. ..+ ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++.+ +
T Consensus 139 g~-~~~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aG 215 (500)
T 2j6l_A 139 GP-ILP--SERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNK 215 (500)
T ss_dssp CB-EEC--CSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTT
T ss_pred Cc-ccc--ccCCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhc
Confidence 21 111 011123467889999999999999999999999999999999999999999999999999998765 4
Q ss_pred cCcCceeeccCChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHH
Q 011466 157 IDSKAIKVIEGGPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRII 235 (485)
Q Consensus 157 lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~ 235 (485)
+|+|++|+|+|+.+.+++|++|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||+ +|||++.|++.++
T Consensus 216 lP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~---~dADl~~Aa~~i~ 292 (500)
T 2j6l_A 216 LPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAF---EDADLSLVVPSAL 292 (500)
T ss_dssp CCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEEC---TTCCHHHHHHHHH
T ss_pred CCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEEC---CCCCHHHHHHHHH
Confidence 99999999999878899999997 9999999999999999999999999999999999999999 9999999999999
Q ss_pred HHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeC
Q 011466 236 VSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYG 313 (485)
Q Consensus 236 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~g 313 (485)
+++| .|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||++++++++++.+++++ ..+|+++++|
T Consensus 293 ~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~g 371 (500)
T 2j6l_A 293 FAAV-GTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYG 371 (500)
T ss_dssp HHHH-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHH-hcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEEC
Confidence 9999 99999999999999999999999999999999999999998 8899999999999999999999 4678999999
Q ss_pred CCc-CCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHH--hhcCc
Q 011466 314 GSV-DEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMV--SETSS 390 (485)
Q Consensus 314 g~~-~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~--~~~~~ 390 (485)
|.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++ +++++
T Consensus 372 g~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~ 451 (500)
T 2j6l_A 372 GKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDC 451 (500)
T ss_dssp CSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCS
T ss_pred CcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCe
Confidence 976 346899999999999999999999999999999999999999999999999999999999999999999 67999
Q ss_pred ceEEEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEe
Q 011466 391 GSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRR 438 (485)
Q Consensus 391 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 438 (485)
|+|+||++.. ...+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 452 G~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 498 (500)
T 2j6l_A 452 GIVNVNIPTS-GAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTIN 498 (500)
T ss_dssp SEEEESSCTT-CCCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred eEEEECCCCc-cCCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence 9999998653 3457899999999999999999999999999999875
No 33
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=2.4e-94 Score=758.51 Aligned_cols=435 Identities=23% Similarity=0.320 Sum_probs=402.1
Q ss_pred cHHHHHHHHHHHhH-hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHH
Q 011466 2 NLERDLQDMREYYR-SGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEW 80 (485)
Q Consensus 2 dv~~av~~A~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~ 80 (485)
|+++++++|++||+ .|+.+|.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..+++.++++++.++++
T Consensus 55 ~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~ 133 (501)
T 1uxt_A 55 EVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKI 133 (501)
T ss_dssp HHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGT
T ss_pred HHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 78999999999999 99999999999999999999999999999999999999999998 89999999999998777665
Q ss_pred hcccccccccccc--CceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-c
Q 011466 81 MSSKKAKLPAVAV--LSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-I 157 (485)
Q Consensus 81 ~~~~~~~~~~~~~--~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-l 157 (485)
. ++..+...... +...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +
T Consensus 134 ~-g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGl 212 (501)
T 1uxt_A 134 G-GDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGF 212 (501)
T ss_dssp C-CEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTC
T ss_pred c-CccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCC
Confidence 3 22211110011 226789999999999999999999999999999999999999999999999999999999998 9
Q ss_pred CcCceeeccCChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHH
Q 011466 158 DSKAIKVIEGGPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIV 236 (485)
Q Consensus 158 P~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~ 236 (485)
|+|++|+|+|+.+.+++|++|+ ||+|+||||+++|+.|++.++ +||+++|||||||+||+ +|||++.|++.+++
T Consensus 213 P~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~---~dADl~~Aa~~i~~ 287 (501)
T 1uxt_A 213 PPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVL---EDADLDLAADKIAR 287 (501)
T ss_dssp CTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCCCEEEEEC---TTSCHHHHHHHHHH
T ss_pred CcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC--CCeEEEEcCCcCeEEEC---CCCCHHHHHHHHHH
Confidence 9999999999558899999996 999999999999999999887 89999999999999999 99999999999999
Q ss_pred HhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCC
Q 011466 237 SKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGG 314 (485)
Q Consensus 237 ~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg 314 (485)
++| .|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||++++++++++.+++++ ..+|+++++||
T Consensus 288 ~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG 366 (501)
T 1uxt_A 288 GIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGG 366 (501)
T ss_dssp HHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHh-cCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCC
Confidence 999 99999999999999999999999999999999999999998 8899999999999999999999 46789999999
Q ss_pred CcCCCC-ceeecEEEeCCC---CCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCc
Q 011466 315 SVDEAN-LFIEPTVLVDPP---LQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSS 390 (485)
Q Consensus 315 ~~~~~g-~~~~Pti~~~~~---~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~ 390 (485)
.. .| +|++|||+.+++ ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++
T Consensus 367 ~~--~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~ 444 (501)
T 1uxt_A 367 RR--LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEV 444 (501)
T ss_dssp CB--CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCS
T ss_pred cc--CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCE
Confidence 75 58 999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeCCCCcccccc
Q 011466 391 GSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRSYLSEIWFRF 448 (485)
Q Consensus 391 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~~~~~~ 448 (485)
|+|+||+++ +...+.+||||+|.||+|+++|.+|+++||+.|+|+.+.. ....++|
T Consensus 445 G~V~iN~~~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~~-~~~~~~~ 500 (501)
T 1uxt_A 445 GAIYINDMP-RHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYK-GKGVWKY 500 (501)
T ss_dssp SEEEETSCC-CCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEECT-TSSSSSC
T ss_pred eeEEEeCCC-CCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEecC-CCccccc
Confidence 999999874 3356889999999999999999999999999999988742 2344554
No 34
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1.7e-93 Score=752.40 Aligned_cols=428 Identities=24% Similarity=0.364 Sum_probs=403.2
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++..|+..+++.++++++.+.++.
T Consensus 45 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~ 124 (490)
T 2ve5_A 45 DVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIE 124 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhc
Confidence 78999999999999999999999999999999999999999999999999999999984499999999999987766542
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
+...+ ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|
T Consensus 125 -~~~~~---~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~g 200 (490)
T 2ve5_A 125 -GEQIP---LRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200 (490)
T ss_dssp -EEEEE---EETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTT
T ss_pred -Ccccc---CCCCceeeEeeccccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcC
Confidence 22211 123456889999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHH-hcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHH
Q 011466 161 AIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAA-VKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVS 237 (485)
Q Consensus 161 ~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a-~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~ 237 (485)
++|+|+| +.+.++.|++|+ ||+|+||||+++|+.|++.+ ++++||+++|||||||+||+ +|||++.|++.++++
T Consensus 201 vv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~a~~l~~v~lElGGk~p~iV~---~dADl~~Aa~~i~~~ 277 (490)
T 2ve5_A 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIF---PDADLDRAADIAVMA 277 (490)
T ss_dssp SEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEC---TTSCHHHHHHHHHHH
T ss_pred eEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhchhccccceEEEcCCCceeEEC---CCCCHHHHHHHHHHH
Confidence 9999999 788999999997 99999999999999999999 99999999999999999999 999999999999999
Q ss_pred hccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCCC
Q 011466 238 KYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGGS 315 (485)
Q Consensus 238 ~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg~ 315 (485)
+| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.+++++ ..+|+++++||.
T Consensus 278 ~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~ 356 (490)
T 2ve5_A 278 NF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGE 356 (490)
T ss_dssp HH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCS
T ss_pred HH-hcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCc
Confidence 99 99999999999999999999999999999999999999998 7899999999999999999999 567999999997
Q ss_pred cC-----CCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCc
Q 011466 316 VD-----EANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSS 390 (485)
Q Consensus 316 ~~-----~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~ 390 (485)
.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++
T Consensus 357 ~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~a 436 (490)
T 2ve5_A 357 RVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEA 436 (490)
T ss_dssp BCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCC
T ss_pred ccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCc
Confidence 62 3689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeC
Q 011466 391 GSIVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 391 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 439 (485)
|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 437 G~v~vN~~~~--~~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k~v~~~~ 483 (490)
T 2ve5_A 437 GICWINTWGE--SPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp SEEEESCCSC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred ceEEECCCCC--CCCCCCcCCCCCCCCCCcchHHHHHHhheeEEEEEcc
Confidence 9999999754 4688999999999999999999999999999998875
No 35
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.2e-93 Score=755.08 Aligned_cols=428 Identities=22% Similarity=0.371 Sum_probs=384.5
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..+++.++++++......
T Consensus 51 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~ 129 (508)
T 3r64_A 51 DVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKAN-LEITLAGNITKESASFPGRVH 129 (508)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCHHHHH-HHHHHHHHHHHHHTTSTTTCC
T ss_pred HHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHhhhhc
Confidence 7899999999999999999999999999999999999999999999999999999998 699999999999876554322
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHH-HHHHHHcccc-cCc
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASS-SLLANALPTY-IDS 159 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~-~~l~~~~~~a-lP~ 159 (485)
. ..+.. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++ .++++++.++ +|+
T Consensus 130 ~--~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~ 206 (508)
T 3r64_A 130 G--RISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPA 206 (508)
T ss_dssp E--EEECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCT
T ss_pred C--ccccc-CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCc
Confidence 2 11110 11235788999999999999999999999999999999999999999999999999 9999999998 999
Q ss_pred CceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhc--ccCceeeecCccCcEEEeCCCCCCcHHHHHHHHH
Q 011466 160 KAIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVK--HLTPITLELGGKCPAIIDSLTSSWDKEAAVKRII 235 (485)
Q Consensus 160 g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~--~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~ 235 (485)
|++|+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.+++ ++||+++|||||||+||+ +|||++.|++.++
T Consensus 207 gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~---~dADl~~Aa~~i~ 283 (508)
T 3r64_A 207 GVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVL---ADADIDAAAQAAA 283 (508)
T ss_dssp TTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEEC---TTSCHHHHHHHHH
T ss_pred CeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEEC---CCCCHHHHHHHHH
Confidence 99999999 588999999997 9999999999999999999998 899999999999999999 9999999999999
Q ss_pred HHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeC
Q 011466 236 VSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYG 313 (485)
Q Consensus 236 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~g 313 (485)
+++| .|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||++++++++++.+++++ ..+|+++++|
T Consensus 284 ~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~g 362 (508)
T 3r64_A 284 VGAF-LHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVE 362 (508)
T ss_dssp HHHH-TSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEEC
T ss_pred HHHH-hcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEec
Confidence 9999 99999999999999999999999999999999999999998 8899999999999999999999 5679999999
Q ss_pred CCcCCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcceE
Q 011466 314 GSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSI 393 (485)
Q Consensus 314 g~~~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v 393 (485)
|.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|
T Consensus 363 G~~--~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V 440 (508)
T 3r64_A 363 GPI--EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMV 440 (508)
T ss_dssp CCE--ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEE
T ss_pred CCC--CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceE
Confidence 975 689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeCC
Q 011466 394 VFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRSY 440 (485)
Q Consensus 394 ~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 440 (485)
+||+++.+ ..+.+||||+|.||+|+++|++|+++||+.|+|+++..
T Consensus 441 ~vN~~~~~-~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~ 486 (508)
T 3r64_A 441 HINDLTVN-DEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRS 486 (508)
T ss_dssp EECC---------------------CCCHHHHHHHTEEEEEEEEECC
T ss_pred EEcCCCCC-CCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEecc
Confidence 99998754 46889999999999999999999999999999998863
No 36
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.5e-93 Score=751.80 Aligned_cols=428 Identities=24% Similarity=0.352 Sum_probs=378.4
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.+|.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..+++.++++++..+..
T Consensus 45 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~- 122 (485)
T 4dng_A 45 QLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKST-IELEQTIAILDEAMTYTGEL- 122 (485)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGC-
T ss_pred HHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHh-
Confidence 7899999999999999999999999999999999999999999999999999999999 69999999999998766542
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHH-HHHHHHcccc-cCc
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASS-SLLANALPTY-IDS 159 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~-~~l~~~~~~a-lP~ 159 (485)
.+...+. ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++ .++.+++.++ +|+
T Consensus 123 ~~~~~~~-~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~ 201 (485)
T 4dng_A 123 GGVKEVP-SDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPA 201 (485)
T ss_dssp SCEECCC-CSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCT
T ss_pred CCeeccc-cCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCC
Confidence 2222111 111235789999999999999999999999999999999999999999999999999 9999999998 999
Q ss_pred CceeeccCC-hhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHH
Q 011466 160 KAIKVIEGG-PAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVS 237 (485)
Q Consensus 160 g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~ 237 (485)
|++|+++|+ .+.+++|++|+ +|+|+||||+.+|+.|++.+++++||+++|+|||||+||+ +|||++.|++.++++
T Consensus 202 gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~---~dADl~~Aa~~i~~~ 278 (485)
T 4dng_A 202 GVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVL---SDADVDRAVDAAIFG 278 (485)
T ss_dssp TSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHHTCEEEEEECCCEEEEEC---TTSCHHHHHHHHHHH
T ss_pred CeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhhccchhhhcCCCCceEEc---CCCCHHHHHHHHHHH
Confidence 999999995 46899999997 9999999999999999999999999999999999999999 999999999999999
Q ss_pred hccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCCC
Q 011466 238 KYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGGS 315 (485)
Q Consensus 238 ~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg~ 315 (485)
+| +|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.+++++ ..+|+++++||.
T Consensus 279 ~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~ 357 (485)
T 4dng_A 279 KF-IHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK 357 (485)
T ss_dssp HT-TCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred HH-hcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCC
Confidence 99 99999999999999999999999999999999999999998 8899999999999999999999 567999999997
Q ss_pred cCCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcceEEE
Q 011466 316 VDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIVF 395 (485)
Q Consensus 316 ~~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~i 395 (485)
. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+|
T Consensus 358 ~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~v 435 (485)
T 4dng_A 358 R--VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHV 435 (485)
T ss_dssp E--ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEE
T ss_pred C--CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEE
Confidence 5 69999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeC
Q 011466 396 NDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 396 N~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 439 (485)
|+++.+ ..+.+||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 436 N~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 436 NDQSVN-DSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp SCC-----------------------CHHHHHHHEEEEEEEEEC
T ss_pred CCCCCC-CCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 998754 4688999999999999999999999999999998875
No 37
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=1.3e-93 Score=750.08 Aligned_cols=423 Identities=26% Similarity=0.357 Sum_probs=397.9
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..+++.++++++.++++.
T Consensus 41 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~ 119 (475)
T 1euh_A 41 EVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRME 119 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999999999999999999999999999999997 899999999999998887665
Q ss_pred ccccccccccccC----cee-EEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc
Q 011466 82 SSKKAKLPAVAVL----SYA-EIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY 156 (485)
Q Consensus 82 ~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a 156 (485)
... .+.. ..+ ... ++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++
T Consensus 120 ~~~-~~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~a 196 (475)
T 1euh_A 120 GEV-LEGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEA 196 (475)
T ss_dssp EEE-EEGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHH
T ss_pred CCc-ccCC--CCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHh
Confidence 332 1111 112 355 89999999999999999999999999999999999999999999999999999999998
Q ss_pred -cCcCceeeccCC-hhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHH
Q 011466 157 -IDSKAIKVIEGG-PAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKR 233 (485)
Q Consensus 157 -lP~g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~ 233 (485)
+|+|++|+|+|+ .+.+++|++|+ +|+|+||||+++|+.|++.++ +||+++|+|||||+||+ +|||++.|++.
T Consensus 197 GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa--~~~v~lElGGk~p~iV~---~dADl~~aa~~ 271 (475)
T 1euh_A 197 GLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVL---EDADLELTAKN 271 (475)
T ss_dssp TCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEECCCCEEEEEC---TTSCHHHHHHH
T ss_pred CCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC--CCcEEEEcCCcCeEEEC---CCCCHHHHHHH
Confidence 999999999994 66899999997 999999999999999999887 89999999999999999 99999999999
Q ss_pred HHHHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHhcC-ccCCCeEee
Q 011466 234 IIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNSIARIINKHHFSRLKNLLND-PMVKDSIVY 312 (485)
Q Consensus 234 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~ 312 (485)
+++++| .|+||.|++++|||||++++|+|+++|+++++++++|||.+++++||++++++++++.+++++ ..+|+++++
T Consensus 272 i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~ 350 (475)
T 1euh_A 272 IIAGAF-GYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALT 350 (475)
T ss_dssp HHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHHHHHHTTCEECS
T ss_pred HHHHHh-hcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 999999 999999999999999999999999999999999999999998899999999999999999998 467899999
Q ss_pred CCCcCCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcce
Q 011466 313 GGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGS 392 (485)
Q Consensus 313 gg~~~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~ 392 (485)
||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+
T Consensus 351 gG~~--~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~ 428 (475)
T 1euh_A 351 EIKR--EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGT 428 (475)
T ss_dssp CCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSE
T ss_pred CCcc--CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEee
Confidence 9975 58999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcC-ccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEe
Q 011466 393 IVFND-AVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRR 438 (485)
Q Consensus 393 v~iN~-~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 438 (485)
|+||+ +..+ .+.+||||+|.||+|+++|.+|+++||+.|+|+.+
T Consensus 429 v~vN~~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 429 VHINNKTQRG--TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp EEESSCCCCC--STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred EEECCCCCCC--CCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 99998 6543 67899999999999999999999999999999875
No 38
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=4.7e-93 Score=747.28 Aligned_cols=428 Identities=22% Similarity=0.306 Sum_probs=399.2
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+++.+++++... ++.
T Consensus 44 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~-~~~ 121 (486)
T 1t90_A 44 DIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAP-SLM 121 (486)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHH-HHH
T ss_pred HHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHH-HHh
Confidence 7899999999999999999999999999999999999999999999999999999998 89999999999987543 344
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
.++.... ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|
T Consensus 122 ~g~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~g 199 (486)
T 1t90_A 122 MGDSLAS--IATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKG 199 (486)
T ss_dssp CEEEEEE--EETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTT
T ss_pred cCccccc--CCCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCC
Confidence 3332211 112346788999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeeccCChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHHhc
Q 011466 161 AIKVIEGGPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSKY 239 (485)
Q Consensus 161 ~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~~~ 239 (485)
++|+|+|+.+.+++|++|+ ||+|+||||+.+|+.|++.+++++||+++|||||||+||+ +|||++.|++.+++++|
T Consensus 200 vv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~---~dADl~~Aa~~i~~~~~ 276 (486)
T 1t90_A 200 VFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVL---NDANLEDTVTNIVGAAF 276 (486)
T ss_dssp SEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEEC---TTSCHHHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCCcEEeccCCCCcEEEC---CCCCHHHHHHHHHHHHH
Confidence 9999999888999999997 9999999999999999999999999999999999999999 99999999999999999
Q ss_pred cCCCCCccccCCE-EEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCCCc
Q 011466 240 GPCAGQACIAIDY-LLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGGSV 316 (485)
Q Consensus 240 ~~~~Gq~C~a~~~-v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg~~ 316 (485)
.|+||.|++++| ||||++ +|+|+++|+++++++++|+|.+ ++++||++++.+++++.+++++ ..+|+++++||..
T Consensus 277 -~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~ 354 (486)
T 1t90_A 277 -GSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRE 354 (486)
T ss_dssp -GGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSS
T ss_pred -hCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcc
Confidence 999999999999 999999 9999999999999999999988 8899999999999999999998 4669999999974
Q ss_pred C--CCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcceEE
Q 011466 317 D--EANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSIV 394 (485)
Q Consensus 317 ~--~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~ 394 (485)
. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+
T Consensus 355 ~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~ 434 (486)
T 1t90_A 355 NVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLG 434 (486)
T ss_dssp SCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEE
T ss_pred CCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEE
Confidence 2 36899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCccccccCCCCCcccCCCCCCC--CcchHHHHHHhhccccEEEeC
Q 011466 395 FNDAVIQFVADTLPFGGIGESGIG--SYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 395 iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~~t~~k~v~~~~ 439 (485)
||++. +..++.+||||+|.||+| +++|++|+++||+.|+|+.+.
T Consensus 435 vN~~~-~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~ 480 (486)
T 1t90_A 435 INLGV-PAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480 (486)
T ss_dssp ESCSC-CCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEEC
T ss_pred ECCCC-CCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 99854 334578999999999999 899999999999999998864
No 39
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=3.4e-93 Score=747.88 Aligned_cols=421 Identities=26% Similarity=0.433 Sum_probs=376.3
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.+|..+|.++|+++++.|+++.++|++++++|+|||..+++..|+..+++.++++++.+.++.
T Consensus 46 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~ 125 (478)
T 3ty7_A 46 DVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYE 125 (478)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhh
Confidence 78999999999999999999999999999999999999999999999999999999955899999999999998887764
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
... .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|
T Consensus 126 ~~~--------~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~g 197 (478)
T 3ty7_A 126 FEE--------RRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKG 197 (478)
T ss_dssp SEE--------EETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTT
T ss_pred ccc--------CCccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcC
Confidence 322 1235788999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHHHHHHh
Q 011466 161 AIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIVSK 238 (485)
Q Consensus 161 ~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~~~ 238 (485)
++|+++| +.+.++.|+.|+ ||+|+||||+++|+.|++.++++++|+++|+|||||+||+ +|||++.|++.+++++
T Consensus 198 vv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~---~dADl~~Aa~~i~~~~ 274 (478)
T 3ty7_A 198 VFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVL---DDVDIKEAAKATTGKV 274 (478)
T ss_dssp TEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTTCEEECCCCCCCEEEEC---TTSCHHHHHHHHHHHH
T ss_pred eEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEecCCCCCcccC---CCCCHHHHHHHHHHHH
Confidence 9999999 678999999997 9999999999999999999999999999999999999999 9999999999999999
Q ss_pred ccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCCCc
Q 011466 239 YGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGGSV 316 (485)
Q Consensus 239 ~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg~~ 316 (485)
| .|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||++++++++++.+++++ ..+|+++++||..
T Consensus 275 ~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~ 353 (478)
T 3ty7_A 275 V-NNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPG 353 (478)
T ss_dssp H-GGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSS
T ss_pred H-HhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCcc
Confidence 9 99999999999999999999999999999999999999998 8899999999999999999998 4679999999943
Q ss_pred -C---CCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcce
Q 011466 317 -D---EANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGS 392 (485)
Q Consensus 317 -~---~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~ 392 (485)
. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+
T Consensus 354 ~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~ 433 (478)
T 3ty7_A 354 KPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGT 433 (478)
T ss_dssp CCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSE
T ss_pred CccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCe
Confidence 2 368999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEE
Q 011466 393 IVFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVR 437 (485)
Q Consensus 393 v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~ 437 (485)
|+||+ . ...+.+||||+|.||+|+++|++|+++||+.|+|+.
T Consensus 434 v~vN~-~--~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 434 VEINE-A--GRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp EEETT-C--C----------------------CCGGGEEEEEEET
T ss_pred EEECC-C--CCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 99999 3 346789999999999999999999999999999873
No 40
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=4.3e-92 Score=747.69 Aligned_cols=440 Identities=20% Similarity=0.271 Sum_probs=404.0
Q ss_pred CcHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHh-HHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHH
Q 011466 1 MNLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEK-ERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKE 79 (485)
Q Consensus 1 ~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~-~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~ 79 (485)
+||++|+++|++||+.|+.+|.++|.++|++++++|+++ +++|++++++|+|||..+++..++..+++.++++++.+++
T Consensus 100 ~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~ 179 (563)
T 4e3x_A 100 ALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVE 179 (563)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 379999999999999999999999999999999999999 9999999999999999999843499999999999999888
Q ss_pred HhccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cC
Q 011466 80 WMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-ID 158 (485)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP 158 (485)
+...+.... ..+...+.+++|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++.++++++.++ +|
T Consensus 180 ~~~~~~~~~---~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP 255 (563)
T 4e3x_A 180 LEGEQPISV---PPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLP 255 (563)
T ss_dssp HTTCCCCCC---TTEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCC
T ss_pred hhCCCccCC---CCCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCC
Confidence 765433221 1123466778889999999999999999999999999 599999999999999999999999998 99
Q ss_pred cCceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCc------eeeecCccCcEEEeCCCCCCcHHHH
Q 011466 159 SKAIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTP------ITLELGGKCPAIIDSLTSSWDKEAA 230 (485)
Q Consensus 159 ~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p------~~lelgG~~~~iV~~~~~daDl~~a 230 (485)
+|+||+|+| +.+.+++|++|+ |++|+||||+.+|+.|++.++++++| +++|+|||||+||+ +|||+|.|
T Consensus 256 ~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~---~dADld~A 332 (563)
T 4e3x_A 256 PNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVH---SSADVDSV 332 (563)
T ss_dssp TTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEEC---TTSCHHHH
T ss_pred CCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCCceeeC---CCCCHHHH
Confidence 999999999 567899999997 99999999999999999999999885 99999999999999 99999999
Q ss_pred HHHHHHHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCC-CC-CCcccccCCHHHHHHHHHHhcCcc--C
Q 011466 231 VKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENP-RK-SNSIARIINKHHFSRLKNLLNDPM--V 306 (485)
Q Consensus 231 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~-~~~~gpl~~~~~~~~~~~~i~~~~--~ 306 (485)
++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++||| .+ ++++||++++.+++++.++|+++. +
T Consensus 333 a~~iv~~~f-~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ 411 (563)
T 4e3x_A 333 VSGTLRSAF-EYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSP 411 (563)
T ss_dssp HHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHH-hcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcC
Confidence 999999999 999999999999999999999999999999999999999 77 889999999999999999999943 6
Q ss_pred CCeEeeCCCcC-CCCceeecEEEeCCCCCCcccccccccceeeeeecCC--HHHHHHHH-hcCCCCceEEEecCCHHHHH
Q 011466 307 KDSIVYGGSVD-EANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKR--IEDSIDFI-NSRPKPLVIYAFTKNERLQR 382 (485)
Q Consensus 307 g~~~~~gg~~~-~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~~v~t~d~~~~~ 382 (485)
|+++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+| +||||+++ |+++|||+++|||+|.+.++
T Consensus 412 ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~ 491 (563)
T 4e3x_A 412 SLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQ 491 (563)
T ss_dssp TEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHH
T ss_pred CCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHH
Confidence 89999999764 4699999999999999999999999999999999997 79999999 78999999999999999999
Q ss_pred HHHhhcC--cceEEEcCccccccCCCCCcccCCCCCCC-CcchHHHHHHhhccccEEEeCCCCccccccC
Q 011466 383 RMVSETS--SGSIVFNDAVIQFVADTLPFGGIGESGIG-SYHGKFSFDAFSHHKPVVRRSYLSEIWFRFP 449 (485)
Q Consensus 383 ~~~~~~~--~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~t~~k~v~~~~~~~~~~~~~~ 449 (485)
+++++++ +|+|+||+.+++...+.+||||+|.||+| +++|++++++|++.|+|..+ +..+.+++||
T Consensus 492 ~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~-~~~~~~~~yp 560 (563)
T 4e3x_A 492 EATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKET-HKPLGDWRYS 560 (563)
T ss_dssp HHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEE-CSCCCCSSCT
T ss_pred HHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEe-CcCCCcccCC
Confidence 9999965 99999999876666788999999999998 89999999999999999886 3334456664
No 41
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.1e-89 Score=722.30 Aligned_cols=421 Identities=24% Similarity=0.339 Sum_probs=393.6
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+++.++++++..+.+.
T Consensus 43 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~ 121 (490)
T 3ju8_A 43 QVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERT 121 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999999999999999999999999999999998 899999999999988877665
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
...... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|
T Consensus 122 ~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~g 197 (490)
T 3ju8_A 122 GEKSGP----LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAG 197 (490)
T ss_dssp CCEEEE----ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTT
T ss_pred CCcccc----CCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcC
Confidence 332211 12335677799999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeeccCChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCce-eeecCccCcEEEeCCCCCCcHHHHHHHHHHHh
Q 011466 161 AIKVIEGGPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPI-TLELGGKCPAIIDSLTSSWDKEAAVKRIIVSK 238 (485)
Q Consensus 161 ~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~-~lelgG~~~~iV~~~~~daDl~~aa~~i~~~~ 238 (485)
++|+|+|+.+.+++|++|+ ||+|+||||+++|+.|++.++++++|+ ++|+|||||+||+ +|||++.|++.+++++
T Consensus 198 vv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lElGGk~p~iV~---~dADl~~Aa~~i~~~~ 274 (490)
T 3ju8_A 198 VLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVE---EVADLDAAVYTIIQSA 274 (490)
T ss_dssp TEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEECCCCEEEEEC---CCSCHHHHHHHHHHHH
T ss_pred eEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCcEEeecCCCCeEEEC---CCCCHHHHHHHHHHHH
Confidence 9999999889999999997 999999999999999999999999998 7999999999999 9999999999999999
Q ss_pred ccCCCCCccccCCEEEEeCCc-HHHHHHHHHHHHHhhcCCC-CCC-CCcccccCCHHHHHHHHHHhcC-ccCCCeEeeCC
Q 011466 239 YGPCAGQACIAIDYLLVEEKF-TSTLVELLKVHIKKMLGEN-PRK-SNSIARIINKHHFSRLKNLLND-PMVKDSIVYGG 314 (485)
Q Consensus 239 ~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~-~~~-~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~gg 314 (485)
| +|+||.|++++|+|||+++ +|+|+++|+++++++++|+ |.+ .+++||++++++++++.+++++ ..+|+++++||
T Consensus 275 ~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg 353 (490)
T 3ju8_A 275 F-ISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAM 353 (490)
T ss_dssp H-GGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred H-hcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECC
Confidence 9 9999999999999999996 9999999999999999999 888 8899999999999999999998 56799999998
Q ss_pred Cc-CCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcceE
Q 011466 315 SV-DEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSI 393 (485)
Q Consensus 315 ~~-~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v 393 (485)
.. +.+|+|++|||+. ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|
T Consensus 354 ~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v 432 (490)
T 3ju8_A 354 TQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIV 432 (490)
T ss_dssp CCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEE
T ss_pred CccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceE
Confidence 65 3579999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCccccccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeC
Q 011466 394 VFNDAVIQFVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 394 ~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 439 (485)
+||++.. ...+.+||||+|.||.+ ++++|++.|+|++..
T Consensus 433 ~vN~~~~-~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 433 NWNKQLT-GAASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp EESSCSS-CCCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred EECCCcC-CCCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 9999765 34578999999999975 479999999998774
No 42
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=4.2e-89 Score=761.98 Aligned_cols=430 Identities=21% Similarity=0.327 Sum_probs=404.3
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++..+.++.
T Consensus 569 dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~aid~lr~~a~~~~~~~ 647 (1026)
T 4f9i_A 569 EVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAY-ADVTEAIDFLEYYAREMIRLG 647 (1026)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999999999999999999999999999999998 799999999999999888876
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
.+..... ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++ +|+|
T Consensus 648 ~~~~~~~---~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~g 724 (1026)
T 4f9i_A 648 QPQRVGH---APGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEG 724 (1026)
T ss_dssp SCEEECC---CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTT
T ss_pred CCccccC---CCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCC
Confidence 4433211 22456788999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHh------cccCceeeecCccCcEEEeCCCCCCcHHHHHH
Q 011466 161 AIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAV------KHLTPITLELGGKCPAIIDSLTSSWDKEAAVK 232 (485)
Q Consensus 161 ~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~------~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~ 232 (485)
++|+|+| +.+.+++|++|+ |++|+||||+++|+.|++.++ ++++|+++|+|||||+||+ +|||++.|++
T Consensus 725 vvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~---~dADld~Aa~ 801 (1026)
T 4f9i_A 725 VFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIID---DDADLDEAVP 801 (1026)
T ss_dssp SEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEEC---TTCCHHHHHH
T ss_pred eEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEEC---CCCCHHHHHH
Confidence 9999999 667899999997 999999999999999999988 5789999999999999999 9999999999
Q ss_pred HHHHHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcCc-cCCCeE
Q 011466 233 RIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLNDP-MVKDSI 310 (485)
Q Consensus 233 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~~-~~g~~~ 310 (485)
.+++|+| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||+|++.+.+++.++|++. .+| ++
T Consensus 802 ~iv~saf-~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~ 879 (1026)
T 4f9i_A 802 HVLYSAF-GFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HV 879 (1026)
T ss_dssp HHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EE
T ss_pred HHHHHHH-hCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eE
Confidence 9999999 99999999999999999999999999999999999999998 88999999999999999999984 445 99
Q ss_pred eeCCCcCCC-CceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcC
Q 011466 311 VYGGSVDEA-NLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETS 389 (485)
Q Consensus 311 ~~gg~~~~~-g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~ 389 (485)
++||..+.. |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++++++++
T Consensus 880 v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~ 959 (1026)
T 4f9i_A 880 LYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFR 959 (1026)
T ss_dssp EEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSC
T ss_pred EecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCC
Confidence 999976544 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEcCccccccCCCCCcccCCCCCCCC-cchHHHHHHhhccccEEEeCC
Q 011466 390 SGSIVFNDAVIQFVADTLPFGGIGESGIGS-YHGKFSFDAFSHHKPVVRRSY 440 (485)
Q Consensus 390 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~l~~~t~~k~v~~~~~ 440 (485)
+|+|+||+.+++...+.+||||+|.||+|+ .+|++++++|++.|+|+.+..
T Consensus 960 aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~~ 1011 (1026)
T 4f9i_A 960 VGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENTM 1011 (1026)
T ss_dssp CSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEECC
T ss_pred EeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEecc
Confidence 999999998777667889999999999995 578999999999999998753
No 43
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=9.6e-89 Score=722.36 Aligned_cols=431 Identities=19% Similarity=0.253 Sum_probs=386.6
Q ss_pred CcHHHHHHHHHHH-hHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHH
Q 011466 1 MNLERDLQDMREY-YRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKE 79 (485)
Q Consensus 1 ~dv~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~ 79 (485)
.|+++|+++|++| |+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+++.+++++..+++
T Consensus 43 ~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~ 121 (534)
T 2y53_A 43 LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGAS 121 (534)
T ss_dssp CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 4899999999999 5999999999999999999999999999999999999999999998 6999999999999887755
Q ss_pred Hhcccc---ccc-cccccCc-eeEEEeecc-eEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHc
Q 011466 80 WMSSKK---AKL-PAVAVLS-YAEIVPEPL-GLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANAL 153 (485)
Q Consensus 80 ~~~~~~---~~~-~~~~~~~-~~~~~~~P~-GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~ 153 (485)
...... ... .....+. ..++.++|+ |||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++
T Consensus 122 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~ 201 (534)
T 2y53_A 122 LGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADV 201 (534)
T ss_dssp TCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHH
T ss_pred ccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHH
Confidence 421100 000 0001111 357889997 9999999999999999999999999999999999999999999999999
Q ss_pred ccc--cCcCceeeccCChhHHHhHhhC--CCCEEEEECCHHHHHHHHHHHh--cccCceeeecCccCcEEEeCCCCCC--
Q 011466 154 PTY--IDSKAIKVIEGGPAVGEHLLQQ--KWDKIFFTGSTRVGRMVMSAAV--KHLTPITLELGGKCPAIIDSLTSSW-- 225 (485)
Q Consensus 154 ~~a--lP~g~v~vv~g~~~~~~~L~~~--~v~~v~ftGs~~~g~~i~~~a~--~~~~p~~lelgG~~~~iV~~~~~da-- 225 (485)
.++ +|+|++|+|+|+.. .+.++ .+|+|+||||+.+|+.|++.++ +++||+++|||||||+||+ +||
T Consensus 202 ~~aG~lP~gvv~vv~g~~~---~l~~~l~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~---~dA~~ 275 (534)
T 2y53_A 202 VDAGILPPGALSIICGSSA---GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILC---ADATP 275 (534)
T ss_dssp HHHTCSCTTSEEECCSCCT---TSGGGCCTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEEC---TTCCT
T ss_pred HHhCCCCCCeEEEEeCChH---HHHhcccccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEEC---CCccc
Confidence 986 69999999998432 24443 3999999999999999998765 8899999999999999999 999
Q ss_pred ---cHHHHHHHHHHHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHh
Q 011466 226 ---DKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLL 301 (485)
Q Consensus 226 ---Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i 301 (485)
|++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++.+++++.++|
T Consensus 276 ~~~Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i 354 (534)
T 2y53_A 276 DTPAFDLFIKEVVREMT-VKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGI 354 (534)
T ss_dssp TSHHHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHH-hCCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999999998 88999999999999999999
Q ss_pred cCccCCCeEeeCCCcC-------CCCceeecEEEeCCCCC--CcccccccccceeeeeecC---CH-----HHHHHHHhc
Q 011466 302 NDPMVKDSIVYGGSVD-------EANLFIEPTVLVDPPLQ--AAIMTEEIFGPLLPIITLK---RI-----EDSIDFINS 364 (485)
Q Consensus 302 ~~~~~g~~~~~gg~~~-------~~g~~~~Pti~~~~~~~--~~i~~~E~fgPvl~v~~~~---~~-----~eai~~~n~ 364 (485)
++..+|+++++||... ..|+|++|||+.+++++ |++++||+||||++|++|+ |+ ||||+++|+
T Consensus 355 ~~a~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~ 434 (534)
T 2y53_A 355 AALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARR 434 (534)
T ss_dssp HHHHTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHT
T ss_pred HHHHcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhC
Confidence 9865789999998642 35899999999999887 6899999999999999999 99 999999999
Q ss_pred CCCCceEEEecCCHHHHHHHHhhc--CcceEEEcCcccc-------ccCCCCCcccCCCCCCCCc-chHHHHHHhhcccc
Q 011466 365 RPKPLVIYAFTKNERLQRRMVSET--SSGSIVFNDAVIQ-------FVADTLPFGGIGESGIGSY-HGKFSFDAFSHHKP 434 (485)
Q Consensus 365 ~~~gl~~~v~t~d~~~~~~~~~~~--~~g~v~iN~~~~~-------~~~~~~pfGG~~~SG~G~~-~g~~~l~~~t~~k~ 434 (485)
++|||++||||+|.+.++++++++ ++|+|+||++..+ ...+.+||||+|.||+|++ +|.+++++|++.|+
T Consensus 435 ~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~ 514 (534)
T 2y53_A 435 GQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSA 514 (534)
T ss_dssp TSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEE
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhhe
Confidence 999999999999999999999999 8999999986431 2357899999999999999 69999999999999
Q ss_pred EEEeC
Q 011466 435 VVRRS 439 (485)
Q Consensus 435 v~~~~ 439 (485)
+...+
T Consensus 515 v~~~p 519 (534)
T 2y53_A 515 IQAAS 519 (534)
T ss_dssp EEEEH
T ss_pred eecCH
Confidence 88754
No 44
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=2.2e-87 Score=746.52 Aligned_cols=428 Identities=22% Similarity=0.345 Sum_probs=397.1
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++|+++|++||+.|+.+|.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.+++++...+.+.
T Consensus 551 dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~~a~~a~~~~ 629 (1001)
T 3haz_A 551 QAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYAAQGRKLF 629 (1001)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHHHHHHHHhhc
Confidence 7899999999999999999999999999999999999999999999999999999998 899999999999999887765
Q ss_pred ccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccc-cCcC
Q 011466 82 SSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTY-IDSK 160 (485)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g 160 (485)
..... .....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.++ +|+|
T Consensus 630 g~~~~--~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~g 707 (1001)
T 3haz_A 630 GSETA--MPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKS 707 (1001)
T ss_dssp SSCEE--CCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTT
T ss_pred Ccccc--ccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcC
Confidence 32211 11123457889999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceeeccCChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcc---cCceeeecCccCcEEEeCCCCCCcHHHHHHHHHH
Q 011466 161 AIKVIEGGPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKH---LTPITLELGGKCPAIIDSLTSSWDKEAAVKRIIV 236 (485)
Q Consensus 161 ~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~---~~p~~lelgG~~~~iV~~~~~daDl~~aa~~i~~ 236 (485)
++|+|+|+.+.+..|++|+ |++|+||||+.+|+.|++.++++ ++|+++|+|||||+||+ +|||++.|++.+++
T Consensus 708 vv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~---~dADld~Aa~~iv~ 784 (1001)
T 3haz_A 708 ALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIAD---ATALPEQVADDVVT 784 (1001)
T ss_dssp TEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEEC---TTSCHHHHHHHHHH
T ss_pred cEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEc---CCCCHHHHHHHHHH
Confidence 9999999554599999997 99999999999999999998864 89999999999999999 99999999999999
Q ss_pred HhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHhcCccCCCeEeeCCC
Q 011466 237 SKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRK-SNSIARIINKHHFSRLKNLLNDPMVKDSIVYGGS 315 (485)
Q Consensus 237 ~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~~~~g~~~~~gg~ 315 (485)
|+| .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.++|++....+++ +||.
T Consensus 785 s~f-~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v-~gg~ 862 (1001)
T 3haz_A 785 SAF-RSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARL-HFAG 862 (1001)
T ss_dssp HHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEE-EEEC
T ss_pred HHH-hCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcCeE-eccc
Confidence 999 99999999999999999999999999999999999999998 89999999999999999999984333378 8887
Q ss_pred cCCCCceeecEEEeCCCCCCcccccccccceeeeeecCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcCcceE
Q 011466 316 VDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKR--IEDSIDFINSRPKPLVIYAFTKNERLQRRMVSETSSGSI 393 (485)
Q Consensus 316 ~~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v 393 (485)
.+..|+|+.|||+.+ +++.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.+.++++++++++|+|
T Consensus 863 ~~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V 940 (1001)
T 3haz_A 863 PAPEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNI 940 (1001)
T ss_dssp CCCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEE
T ss_pred cCCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeE
Confidence 766799999999985 6889999999999999999996 799999999999999999999999999999999999999
Q ss_pred EEcCccccccCCCCCcccCCCCCCC-CcchHHHHHHhhccccEEEeC
Q 011466 394 VFNDAVIQFVADTLPFGGIGESGIG-SYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 394 ~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~t~~k~v~~~~ 439 (485)
+||+++++...+.+||||+|.||+| +.+|++++++|++.|+|+++.
T Consensus 941 ~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 941 YVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp EESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred EEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 9999877666678999999999999 567899999999999999875
No 45
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.3e-86 Score=701.11 Aligned_cols=421 Identities=18% Similarity=0.194 Sum_probs=382.4
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHH--
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKE-- 79 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~-- 79 (485)
|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++ .|+..+++.++++++.+++
T Consensus 64 dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~ 142 (528)
T 3v4c_A 64 LVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGD 142 (528)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhcc
Confidence 7899999999999999999999999999999999999999999999999999999998 7999999999999998876
Q ss_pred Hhccccccccc---cccCceeEEEeecceEEEEEcCCchhHHHhH--HHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcc
Q 011466 80 WMSSKKAKLPA---VAVLSYAEIVPEPLGLVLIISSWNFPIGLSL--EPLIGAIAAGNTVVLKPSELASASSSLLANALP 154 (485)
Q Consensus 80 ~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~--~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~ 154 (485)
+.......... ...+...+++++|+|||++|+|||||+.+.+ +++++||++||+||+|||+.+|+++.++++++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ 222 (528)
T 3v4c_A 143 YLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVD 222 (528)
T ss_dssp GGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHH
Confidence 43322110000 0112356889999999999999999999865 999999999999999999999999999999765
Q ss_pred ----cc-cCcCceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhccc--CceeeecCccCcEEEeCCCCCC
Q 011466 155 ----TY-IDSKAIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHL--TPITLELGGKCPAIIDSLTSSW 225 (485)
Q Consensus 155 ----~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~--~p~~lelgG~~~~iV~~~~~da 225 (485)
++ +|+|++|+|+| +.+.+++|++|+ ||+|+||||+.+|+.|++.+++++ +|+++|+|||||+||+ +||
T Consensus 223 ~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~---~dA 299 (528)
T 3v4c_A 223 AAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLL---PEA 299 (528)
T ss_dssp HHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEEC---HHH
T ss_pred HHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEEC---CCC
Confidence 44 99999999999 678999999997 999999999999999999999999 9999999999999999 999
Q ss_pred ---cHHHHHHHHHHHhccCCCCCccccCCEEEEeCC-cHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHh
Q 011466 226 ---DKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEK-FTSTLVELLKVHIKKMLGENPRKSNSIARIINKHHFSRLKNLL 301 (485)
Q Consensus 226 ---Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i 301 (485)
|++.|++.+++++| .|+||.|++++|||||++ +||+|+++|++++++++.| +.+||++++.+.+++.+++
T Consensus 300 d~~dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~-----~~~gp~~~~~~~~~v~~~~ 373 (528)
T 3v4c_A 300 LKARAETLGQGWAGSLT-MGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ-----TMLTDGIAKAYRDGQARFA 373 (528)
T ss_dssp HHHHHHHHHHHHHHHHH-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCE-----ECSCHHHHHHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHH-hcCCCccccCcEEEEecccHHHHHHHHHHHHHHhcccC-----CCCCHHHHHHHHHHHHHHH
Confidence 88999999999999 999999999999999998 9999999999999988653 5799999999999999988
Q ss_pred cCccCCCeEeeCCCcCCCCceeecEEEeCCCCC---CcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecC--
Q 011466 302 NDPMVKDSIVYGGSVDEANLFIEPTVLVDPPLQ---AAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTK-- 376 (485)
Q Consensus 302 ~~~~~g~~~~~gg~~~~~g~~~~Pti~~~~~~~---~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~-- 376 (485)
+ .+|+++++||.. .|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 374 ~--~~Ga~v~~gG~~--~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 449 (528)
T 3v4c_A 374 T--RNAVKPLLATES--SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAG 449 (528)
T ss_dssp T--CTTCEEEECCCC--CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGG
T ss_pred H--hCCCEEEeCCCc--CCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCC
Confidence 6 358999999975 7999999999988887 899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcC--cceEEEcCcccc-ccCCCCCccc-CCCCCCCCcc--hHHHHHHhhccccEE
Q 011466 377 NERLQRRMVSETS--SGSIVFNDAVIQ-FVADTLPFGG-IGESGIGSYH--GKFSFDAFSHHKPVV 436 (485)
Q Consensus 377 d~~~~~~~~~~~~--~g~v~iN~~~~~-~~~~~~pfGG-~~~SG~G~~~--g~~~l~~~t~~k~v~ 436 (485)
|.+++++++++++ +|+|+||+++++ ...+.+|||| +|.||+|+++ |++|+++|++.|++.
T Consensus 450 d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~q 515 (528)
T 3v4c_A 450 DLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAYQ 515 (528)
T ss_dssp GHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEEE
T ss_pred CHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHhh
Confidence 8899999999998 999999996553 2468899999 9999999986 999999999988643
No 46
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=3.1e-85 Score=691.83 Aligned_cols=418 Identities=17% Similarity=0.213 Sum_probs=375.4
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHH--
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKE-- 79 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~-- 79 (485)
|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+++.++++++.+++
T Consensus 31 ~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~ 109 (510)
T 1ez0_A 31 EVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGS 109 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhCc
Confidence 7899999999999999999999999999999999999999999999999999999987 7999999999999998876
Q ss_pred Hhccccccc-ccc-ccC-ceeEEEeecceEEEEEcCCchhHHHh--HHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcc
Q 011466 80 WMSSKKAKL-PAV-AVL-SYAEIVPEPLGLVLIISSWNFPIGLS--LEPLIGAIAAGNTVVLKPSELASASSSLLANALP 154 (485)
Q Consensus 80 ~~~~~~~~~-~~~-~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~ 154 (485)
|........ +.. ..+ ...+++++|+|||++|+|||||+.+. .+++++||++||+||+|||+.+|+++.++++++.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~ 189 (510)
T 1ez0_A 110 YHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIE 189 (510)
T ss_dssp GGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred cccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHH
Confidence 543221100 000 111 13578999999999999999999985 4999999999999999999999999999999985
Q ss_pred c----c-cCcCceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhccc--CceeeecCccCcEEEeCCCCCC
Q 011466 155 T----Y-IDSKAIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHL--TPITLELGGKCPAIIDSLTSSW 225 (485)
Q Consensus 155 ~----a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~--~p~~lelgG~~~~iV~~~~~da 225 (485)
+ + +|+|++|+|+| +.+.+++|++|+ ||+|+||||+.+|+.|++.+++++ ||+++|||||||+||+ +||
T Consensus 190 ~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l~~~pv~lELGGk~p~iV~---~dA 266 (510)
T 1ez0_A 190 QALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIF---PSA 266 (510)
T ss_dssp HHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCEEEEC---HHH
T ss_pred HHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccCCCccEEEECCCCCeEEEe---CCC
Confidence 4 4 89999999999 778999999997 999999999999999999999986 9999999999999999 999
Q ss_pred cHH--HHHHHHHHHhccCCCCCccccCCEEEEeCC-cHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHhc
Q 011466 226 DKE--AAVKRIIVSKYGPCAGQACIAIDYLLVEEK-FTSTLVELLKVHIKKMLGENPRKSNSIARIINKHHFSRLKNLLN 302 (485)
Q Consensus 226 Dl~--~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~ 302 (485)
|++ .|++.+++++| .|+||.|++++|||||++ ++|+|+++|++++++++. ||++++.+.+++.++++
T Consensus 267 Dl~~~~aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~---------gp~~~~~~~~~~~~~v~ 336 (510)
T 1ez0_A 267 MRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP---------STLLTPGIRDSYQSQVV 336 (510)
T ss_dssp HHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC---------BCCSSHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHH-cCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC---------CCCCCHHHHHHHHHHHH
Confidence 999 99999999999 999999999999999999 999999999999999873 68888888888888888
Q ss_pred C-c-cCCCeEeeCCCcCCCCceeecEEEeCCCCC---CcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCC
Q 011466 303 D-P-MVKDSIVYGGSVDEANLFIEPTVLVDPPLQ---AAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKN 377 (485)
Q Consensus 303 ~-~-~~g~~~~~gg~~~~~g~~~~Pti~~~~~~~---~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d 377 (485)
+ . .+|+++++||. .|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 337 ~~~~~~Ga~~~~gg~---~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d 413 (510)
T 1ez0_A 337 SRGSDDGIDVTFSQA---ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATE 413 (510)
T ss_dssp HHHTSTTEEEEECCC---CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCG
T ss_pred HHHhcCCCEEEecCC---CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccC
Confidence 7 3 35889999997 3999999999988777 9999999999999999999999999999999999999999998
Q ss_pred H--HHHHHHHhhc--CcceEEEcCccccc-cCCCCCccc-CCCCCCCCc--chHHHHHHhhccccEE
Q 011466 378 E--RLQRRMVSET--SSGSIVFNDAVIQF-VADTLPFGG-IGESGIGSY--HGKFSFDAFSHHKPVV 436 (485)
Q Consensus 378 ~--~~~~~~~~~~--~~g~v~iN~~~~~~-~~~~~pfGG-~~~SG~G~~--~g~~~l~~~t~~k~v~ 436 (485)
. ++++++++++ ++|+|+||++..+. ..+.+|||| +|.||.|+. +|.+|+++|++.|++.
T Consensus 414 ~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 414 EDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp GGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred cCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 7 7899999999 79999999865432 356899999 788998754 7999999999877654
No 47
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=4e-81 Score=652.27 Aligned_cols=405 Identities=18% Similarity=0.188 Sum_probs=326.2
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCCh----hhHhHhHHHH-HHHHHHHHHHH
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHH----VEAFRDEIGV-LQKSINFALQN 76 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~----~ea~~~ev~~-~~~~l~~~~~~ 76 (485)
.+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||. .++...|+.. ++..++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999998 8886579998 99999999999
Q ss_pred HHHHhccccc--cccc-c--ccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHH
Q 011466 77 LKEWMSSKKA--KLPA-V--AVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLAN 151 (485)
Q Consensus 77 ~~~~~~~~~~--~~~~-~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~ 151 (485)
++++.+.... .... . ..+...++.++|+|||++|+||| | .++++++++||++||+||+|||+.+|+++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 9887643221 1101 0 11345789999999999999999 9 9999999999999999999999999999999999
Q ss_pred Hcc----c----c-cCcCceeeccCCh-hHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeC
Q 011466 152 ALP----T----Y-IDSKAIKVIEGGP-AVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDS 220 (485)
Q Consensus 152 ~~~----~----a-lP~g~v~vv~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~ 220 (485)
++. + + +|+|++|+|+ +. +.++.|+.|+ ||+|+||||+++|+.|++.+ +||+++|+|||||+||+
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~- 247 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLD- 247 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEEC-
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEEC-
Confidence 995 7 6 9999999999 55 6789999997 99999999999999999877 69999999999999999
Q ss_pred CCCCCcHHHHHHHHHHHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcC---CCCCCCCcccccCCHHHHHHH
Q 011466 221 LTSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLG---ENPRKSNSIARIINKHHFSRL 297 (485)
Q Consensus 221 ~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~~~~~~~~gpl~~~~~~~~~ 297 (485)
+|||++.|++.+++++| +|+| .|++++|||||+++ |+|+++|+++++++++ |||.+
T Consensus 248 --~dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~---------------- 306 (468)
T 1vlu_A 248 --EDADLIKAKRISLDAKT-NYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL---------------- 306 (468)
T ss_dssp --TTCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH----------------
T ss_pred --CCCCHHHHHHHHHHHhc-CCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH----------------
Confidence 99999999999999999 9999 99999999999999 9999999999999987 77532
Q ss_pred HHH-hcCccCCCeEeeCCCcCCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecC
Q 011466 298 KNL-LNDPMVKDSIVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTK 376 (485)
Q Consensus 298 ~~~-i~~~~~g~~~~~gg~~~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~ 376 (485)
.++ +++.. ++++||. | ++||++ ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 307 ~~~~i~~a~---~~~~gG~----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~ 375 (468)
T 1vlu_A 307 KTAYFDKLN---ELGKLTE----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTE 375 (468)
T ss_dssp HHHHHHHHH---HHTCCCH----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECS
T ss_pred hcccccccc---eeeccCC----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeC
Confidence 223 33311 3566664 4 689987 7889999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcCcceEEEcCccccccCCCCCcc-----cCCCCCCCCcchHHHHHHhhccccEEEeCCCCccccccCCC
Q 011466 377 NERLQRRMVSETSSGSIVFNDAVIQFVADTLPFG-----GIGESGIGSYHGKFSFDAFSHHKPVVRRSYLSEIWFRFPPW 451 (485)
Q Consensus 377 d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfG-----G~~~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~~~~~~~p~ 451 (485)
|.+.++++++++++|+|+||++.. ..+.+||| |+|.||+|++ |++|+++|++.|+|+.+.. ..+ |||
T Consensus 376 d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~~----~~r-~py 447 (468)
T 1vlu_A 376 NKANAEKFMKGVDSSGVYWNASTR--FADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGDG----QVA-SDY 447 (468)
T ss_dssp CHHHHHHHHHHCCCSEEEESSCGG--GCC-----------------------CCSGGGEEEEEEEECSS----CCS-CCC
T ss_pred CHHHHHHHHHhCCeeEEEEcCCCC--CCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECCC----CcC-ccc
Confidence 999999999999999999998764 35778999 9999999999 9999999999999988752 344 899
Q ss_pred ch
Q 011466 452 NN 453 (485)
Q Consensus 452 ~~ 453 (485)
+.
T Consensus 448 ~~ 449 (468)
T 1vlu_A 448 LG 449 (468)
T ss_dssp --
T ss_pred cc
Confidence 73
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=2.3e-79 Score=640.27 Aligned_cols=406 Identities=15% Similarity=0.135 Sum_probs=359.7
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+..+++..+... .++.+..+.
T Consensus 13 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~-------~~~~~~~~~ 85 (464)
T 3k9d_A 13 EVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVF-------ASKHVYNYI 85 (464)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHH-------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHH-------HHHHHHHhh
Confidence 6899999999999999999999999999999999999999999999999999999887434333 333344444
Q ss_pred ccccccc-cccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHH----cccc
Q 011466 82 SSKKAKL-PAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANA----LPTY 156 (485)
Q Consensus 82 ~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~----~~~a 156 (485)
+...... .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++ +.++
T Consensus 86 ~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~a 165 (464)
T 3k9d_A 86 KDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKA 165 (464)
T ss_dssp TTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHT
T ss_pred hcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHh
Confidence 4332111 1112345678899999999999999999999999999999999999999999999999886654 5666
Q ss_pred -cCcCceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecC-ccCcEEEeCCCCCCcHHHHHH
Q 011466 157 -IDSKAIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELG-GKCPAIIDSLTSSWDKEAAVK 232 (485)
Q Consensus 157 -lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelg-G~~~~iV~~~~~daDl~~aa~ 232 (485)
+|+|++|+|+| +.+.+++|++|+ ||+|+||||+. +++.+++++||+ +|+| ||+|+||+ +|||++.|++
T Consensus 166 G~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~---~dADl~~Aa~ 237 (464)
T 3k9d_A 166 GCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIE---RSANIPRAVK 237 (464)
T ss_dssp TCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEEC---TTSCHHHHHH
T ss_pred CCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEEC---CCCCHHHHHH
Confidence 99999999999 788999999997 99999999998 566777889999 7888 99999999 9999999999
Q ss_pred HHHHHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHH-------HhhcCCCCC-C-CCcccccCCHHHHHHHHHHhcC
Q 011466 233 RIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHI-------KKMLGENPR-K-SNSIARIINKHHFSRLKNLLND 303 (485)
Q Consensus 233 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~-------~~~~~g~~~-~-~~~~gpl~~~~~~~~~~~~i~~ 303 (485)
.+++++| +|+||.|++++|||||+++||+|+++|+++. +.+++|+|. + ++++||+++.++++++.++++.
T Consensus 238 ~i~~~~~-~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~ 316 (464)
T 3k9d_A 238 HILDSKT-FDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGL 316 (464)
T ss_dssp HHHHHHT-GGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTC
T ss_pred HHHHHHh-cCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhh
Confidence 9999999 9999999999999999999999999999985 456778876 4 7899999999999999999998
Q ss_pred -ccCCCeEeeCCCcCCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHH----HHHhcCCCCceEEEecCCH
Q 011466 304 -PMVKDSIVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSI----DFINSRPKPLVIYAFTKNE 378 (485)
Q Consensus 304 -~~~g~~~~~gg~~~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~~~v~t~d~ 378 (485)
..+|+++++||.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||+++|||+|.
T Consensus 317 a~~~ga~vl~gg~~-------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~ 382 (464)
T 3k9d_A 317 TVPADARVLIAEET-------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDK 382 (464)
T ss_dssp CCCTTCCEEEEECC-------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred hhcCCCEEEEcCCC-------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCH
Confidence 5678999999853 567788865 89999999999999999997 7999999999999999999
Q ss_pred HHHHHHHhhcCcceEEEcCcccc-------ccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEe
Q 011466 379 RLQRRMVSETSSGSIVFNDAVIQ-------FVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRR 438 (485)
Q Consensus 379 ~~~~~~~~~~~~g~v~iN~~~~~-------~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 438 (485)
+.++++++++++|+|+||++..+ ...+.+|||| |.+|.|+++|..|+++|++.|+|...
T Consensus 383 ~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 383 EIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp HHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred HHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 99999999999999999998764 2578999998 88999999999999999999999765
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.1e-80 Score=641.21 Aligned_cols=398 Identities=20% Similarity=0.216 Sum_probs=333.7
Q ss_pred CcHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhh-------CCChh----hHhHhHHHHHHHH
Q 011466 1 MNLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDL-------GKHHV----EAFRDEIGVLQKS 69 (485)
Q Consensus 1 ~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~et-------Gk~~~----ea~~~ev~~~~~~ 69 (485)
+|+++++++|++||+.|+.+|..+|.++|+++++.|+++.++|++++++|+ |||.. ++. .|+..+++.
T Consensus 29 ~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~~a~-~ev~~~~~~ 107 (463)
T 2h5g_A 29 PTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLSLST-SKLNSLAIG 107 (463)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTTCCCH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhhhhhH-HHHHHHHHH
Confidence 479999999999999999999999999999999999999999999999999 69987 466 799999999
Q ss_pred HHHHHHHHHHHhccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHH
Q 011466 70 INFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLL 149 (485)
Q Consensus 70 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l 149 (485)
++++++.++++..... +......+...++.++|+|||++|+||| |+..+ +++++||++||+||+|||+.+|+++.++
T Consensus 108 ~~~~a~~~~~~~g~~~-~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t~~~l 184 (463)
T 2h5g_A 108 LRQIAASSQDSVGRVL-RRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHSNRIL 184 (463)
T ss_dssp HHHHHHHCTTSTTCEE-EEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhHhhcCccc-ccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHHHHHH
Confidence 9999877766553321 1110012335789999999999999777 77766 8999999999999999999999999999
Q ss_pred HHHccccc----CcCceeeccCChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCC
Q 011466 150 ANALPTYI----DSKAIKVIEGGPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSS 224 (485)
Q Consensus 150 ~~~~~~al----P~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~d 224 (485)
++++.+++ |+|++|+|+|+.+.++.|+.|+ ||+|+||||+.+|+.|++.++ +||+++|||||||+||+ +|
T Consensus 185 ~~l~~~al~~~GP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv~lElGGk~p~iV~---~d 259 (463)
T 2h5g_A 185 HLLTQEALSIHGVKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPVMGHSEGICHMYVD---SE 259 (463)
T ss_dssp HHHHHHHHHTTTCGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCBCSCSCCCEEEEEC---TT
T ss_pred HHHHHHHHHhcCCCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCEEEecCCcceEEEc---CC
Confidence 99999875 6999999999777899999997 999999999999999999887 89999999999999999 99
Q ss_pred CcHHHHHHHHHHHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHhcC-
Q 011466 225 WDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNSIARIINKHHFSRLKNLLND- 303 (485)
Q Consensus 225 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~- 303 (485)
||++.|++.+++++| .| ||.|++++|||||+++|| ||+ +++ ++++
T Consensus 260 ADl~~Aa~~i~~~~f-~n-GQ~C~a~~rvlV~~~i~d------------------------~p~-----~~~---~i~~~ 305 (463)
T 2h5g_A 260 ASVDKVTRLVRDSKC-EY-PAACNALETLLIHRDLLR------------------------TPL-----FDQ---IIDML 305 (463)
T ss_dssp CCTTTHHHHHHHHHH-SC-TTSTTSEEEEEEEGGGTT------------------------SHH-----HHH---HHHHH
T ss_pred CCHHHHHHHHHHHhc-cC-CCccccCcEEEEeccccc------------------------hHH-----HHH---HHHHH
Confidence 999999999999999 99 999999999999999998 222 122 2333
Q ss_pred ccCCCeEeeCCCcCCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 011466 304 PMVKDSIVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRR 383 (485)
Q Consensus 304 ~~~g~~~~~gg~~~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~ 383 (485)
..+|++++.|+.....++|+ +++|++++||+||||++|++|+|+||||+++|++++||++||||+|.+.+++
T Consensus 306 ~~~Ga~v~~G~~~~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~ 377 (463)
T 2h5g_A 306 RVEQVKIHAGPKFASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEF 377 (463)
T ss_dssp HHTTCEEEECHHHHC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHH
T ss_pred HhCCCEEEeCCcccccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHH
Confidence 24588888554322234443 5789999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCcceEEEcCccccccCCCCCcccCCCCCCC--Cc--chHHHHHHhhccccEEEeCCCCccccccCCCchhHH
Q 011466 384 MVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIG--SY--HGKFSFDAFSHHKPVVRRSYLSEIWFRFPPWNNYKL 456 (485)
Q Consensus 384 ~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~--~g~~~l~~~t~~k~v~~~~~~~~~~~~~~p~~~~~~ 456 (485)
+++++++|+|+||++.. ..+.+||||+|.||+| ++ +|++|+++||+.|+|+.+.. ..+ |||++.|.
T Consensus 378 ~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~----~~r-~~y~~~~~ 447 (463)
T 2h5g_A 378 FLQHVDSACVFWNASTR--FSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKD----HVV-SDFSEHGS 447 (463)
T ss_dssp HHHHCCSSEEEESSCGG--GCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECSS----CCG-GGGSTTSS
T ss_pred HHHhCCeeEEEEeCCcc--CCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECCC----ccc-CCccccch
Confidence 99999999999998764 3678999999999999 76 89999999999999988753 344 78876543
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=3.8e-77 Score=619.82 Aligned_cols=387 Identities=19% Similarity=0.225 Sum_probs=320.9
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCCh----hhHhH-------hHHHHHHHHH
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHH----VEAFR-------DEIGVLQKSI 70 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~----~ea~~-------~ev~~~~~~l 70 (485)
|+++++++|++||+.|+.+|..+|.++|+++++.|+++.++|++++++|+||+. .+++. .|+..+++.+
T Consensus 27 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~~l 106 (444)
T 4ghk_A 27 YMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVEGL 106 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999999999999999985 35543 2577777777
Q ss_pred HHHHHHHHHHhccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHH
Q 011466 71 NFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLA 150 (485)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~ 150 (485)
+++++..+. . +...+......+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|+++.+++
T Consensus 107 ~~~a~~~~~-~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~ 182 (444)
T 4ghk_A 107 RQVATLPDP-I-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTALA 182 (444)
T ss_dssp HHHHHSCCC-T-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHH
T ss_pred HHHHhhccc-c-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHHH
Confidence 766432211 0 11111000112446789999999999999998 8 688999999999999999999999999999999
Q ss_pred HHc----ccc-cCcCceeeccC-Chh-HHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCC
Q 011466 151 NAL----PTY-IDSKAIKVIEG-GPA-VGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLT 222 (485)
Q Consensus 151 ~~~----~~a-lP~g~v~vv~g-~~~-~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~ 222 (485)
+++ .++ +|+|++|+|+| +.+ .++.|..|+ ||+|+||||+.+|+.|++.+ +||+++|||||||+||+
T Consensus 183 ~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~--- 256 (444)
T 4ghk_A 183 KLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVD--- 256 (444)
T ss_dssp HHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEEC---
T ss_pred HHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEEC---
Confidence 997 566 99999999998 554 677777787 99999999999999999876 69999999999999999
Q ss_pred CCCcHHHHHHHHHHHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcC---CCCCCCCcccccCCHHHHHHHHH
Q 011466 223 SSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLG---ENPRKSNSIARIINKHHFSRLKN 299 (485)
Q Consensus 223 ~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~~~~~~~~gpl~~~~~~~~~~~ 299 (485)
+|||++.|++.+++++| .|+| .|++++|||||+++||+|+++|+++++++++ |||. ..+
T Consensus 257 ~dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~----------------~~~ 318 (444)
T 4ghk_A 257 DRASVTKALTVCDNAKT-HRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD----------------ARA 318 (444)
T ss_dssp TTCCHHHHHHHCC-----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH----------------HHH
T ss_pred CCCCHHHHHHHHHHHhc-CCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH----------------HHH
Confidence 99999999999999999 9999 9999999999999999999999999999987 6542 134
Q ss_pred HhcCccCCCeEeeCCCcCCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011466 300 LLNDPMVKDSIVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNER 379 (485)
Q Consensus 300 ~i~~~~~g~~~~~gg~~~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~ 379 (485)
+++++.. | ++ ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 319 ~i~~a~~-------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 377 (444)
T 4ghk_A 319 VLEAAGV-------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHD 377 (444)
T ss_dssp HHHHTTC-------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHH
T ss_pred HHHhccc-------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHH
Confidence 4543211 1 11 3567999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCcceEEEcCccccccCCCCCcccCCCCCCC----CcchHHHHHHhhccccEEEeC
Q 011466 380 LQRRMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIG----SYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 380 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~t~~k~v~~~~ 439 (485)
.++++++++++|+|+||+++. ..+.+||||.+.||+| +++|++|+++||+.|+|++..
T Consensus 378 ~a~~~a~~l~aG~V~vN~~~~--~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 378 RAMRFLREVDSASVMVNASTR--FADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp HHHHHHHHCCSSEEEEEECGG--GCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred HHHHHHHhCCcceEEEcCCCc--cCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 999999999999999999765 3578999999999988 688999999999999998875
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=7.1e-77 Score=614.80 Aligned_cols=385 Identities=21% Similarity=0.251 Sum_probs=332.1
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCCh----hhHhH-------hHHHHHHHHH
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHH----VEAFR-------DEIGVLQKSI 70 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~----~ea~~-------~ev~~~~~~l 70 (485)
++++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+||+. .++.. .|+..+++.+
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~~l 94 (427)
T 1o20_A 15 ELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKAC 94 (427)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999999999999999986 56542 4788888888
Q ss_pred HHHHHHHHHHhccccccccccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHH
Q 011466 71 NFALQNLKEWMSSKKAKLPAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLA 150 (485)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~ 150 (485)
+++++..+. . +...+......+...+++++|+|||++|+||| +.++++++++||++||+||+|||+.+|+++.+++
T Consensus 95 ~~~a~~~~~-~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l~ 170 (427)
T 1o20_A 95 ETVIGLKDP-V-GEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAIV 170 (427)
T ss_dssp HHHHHSCCC-T-TCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHH
T ss_pred HHHHhcccc-c-CccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHHH
Confidence 877542211 0 11100000011335688999999999999986 4789999999999999999999999999999999
Q ss_pred HHcc----cc-cCcCceeeccC-Chh-HHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCC
Q 011466 151 NALP----TY-IDSKAIKVIEG-GPA-VGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLT 222 (485)
Q Consensus 151 ~~~~----~a-lP~g~v~vv~g-~~~-~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~ 222 (485)
+++. ++ +|+|++|+|+| +.+ .++.|..|+ ||+|+||||+++|+.|++.+ +||+++|||||||+||+
T Consensus 171 ~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~--- 244 (427)
T 1o20_A 171 SAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVD--- 244 (427)
T ss_dssp HHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEEC---
T ss_pred HHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEe---
Confidence 9997 55 99999999998 544 677777786 99999999999999999887 59999999999999999
Q ss_pred CCCcHHHHHHHHHHHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHhc
Q 011466 223 SSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNSIARIINKHHFSRLKNLLN 302 (485)
Q Consensus 223 ~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~ 302 (485)
+|||+|.|++.+++++| .|+| .|++++|||||+++||+|+++|++++++++++
T Consensus 245 ~dADl~~Aa~~i~~~~f-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------- 297 (427)
T 1o20_A 245 ESADLKKAVPVIINAKT-QRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------- 297 (427)
T ss_dssp TTSCHHHHHHHHHHHHH-SCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-------------------------
T ss_pred CCCCHHHHHHHHHHHhc-cCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-------------------------
Confidence 99999999999999999 9999 99999999999999999999999999988542
Q ss_pred CccCCCeEeeCCCcCCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 011466 303 DPMVKDSIVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQR 382 (485)
Q Consensus 303 ~~~~g~~~~~gg~~~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~ 382 (485)
+.||... .+ |+ ||| ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++
T Consensus 298 --------~~gg~~~-~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 363 (427)
T 1o20_A 298 --------VRGCEKT-RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAK 363 (427)
T ss_dssp --------EEECHHH-HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHH
T ss_pred --------eecChhh-hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHH
Confidence 1122110 12 33 885 3457899999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCcceEEEcCccccccCCCCCcccCCCCCCC----CcchHHHHHHhhccccEEEeC
Q 011466 383 RMVSETSSGSIVFNDAVIQFVADTLPFGGIGESGIG----SYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 383 ~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~t~~k~v~~~~ 439 (485)
++++++++|+|+||++.. ..+.+||||.|.||+| +++|++|+++||+.|+|+...
T Consensus 364 ~~~~~l~~G~V~iN~~~~--~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 364 KFVSEIDAAAVYVNASTR--FTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHCCSSEEEESSCGG--GCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHhCCccEEEECCCCc--cCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 999999999999998654 4678999999999987 467999999999999998875
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=4.1e-75 Score=606.23 Aligned_cols=368 Identities=15% Similarity=0.140 Sum_probs=318.5
Q ss_pred cHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 011466 2 NLERDLQDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDLGKHHVEAFRDEIGVLQKSINFALQNLKEWM 81 (485)
Q Consensus 2 dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~~~ea~~~ev~~~~~~l~~~~~~~~~~~ 81 (485)
|+++++++|++||+.|+.+|.++|.++|+++++.+++++++|++++++|+|||..+++..|+..+.+.+ .++.
T Consensus 8 ~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~-------~~~~ 80 (452)
T 3my7_A 8 ELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFI-------YNKY 80 (452)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHH-------HHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH-------HHHh
Confidence 789999999999999999999999999999999999999999999999999999999844555544444 2233
Q ss_pred ccccccc-cccccCceeEEEeecceEEEEEcCCchhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcc----cc
Q 011466 82 SSKKAKL-PAVAVLSYAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALP----TY 156 (485)
Q Consensus 82 ~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~----~a 156 (485)
....... .....+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++. ++
T Consensus 81 ~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~a 160 (452)
T 3my7_A 81 KDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAA 160 (452)
T ss_dssp TTCCCSEEC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHT
T ss_pred hhccccccccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHc
Confidence 2222111 111123357889999999999999999999999999999999999999999999999999888876 45
Q ss_pred -cCcCceeeccC-ChhHHHhHhhCC-CCEEEEECCHHHHHHHHHHHhcccCceeeecCccCcEEEeCCCCCCcHHHHHHH
Q 011466 157 -IDSKAIKVIEG-GPAVGEHLLQQK-WDKIFFTGSTRVGRMVMSAAVKHLTPITLELGGKCPAIIDSLTSSWDKEAAVKR 233 (485)
Q Consensus 157 -lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lelgG~~~~iV~~~~~daDl~~aa~~ 233 (485)
+|+|++|+|+| +.+.+++|++|+ |++|+||||+.+ .+.+++++||+++|+|||||+||+ +|||++.|++.
T Consensus 161 G~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~----~~~a~~~~kp~~~e~gG~~p~iV~---~dADl~~Aa~~ 233 (452)
T 3my7_A 161 GAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGM----VKAAYSSGKPAIGVGAGNVPVVID---ETADIKRAVAS 233 (452)
T ss_dssp TCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHH----HHHHHTSSSCEEECC--CEEEEEC---TTSCHHHHHHH
T ss_pred CCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHH----HHHHHhcCCCEEecCCCCCeEEEe---CCCCHHHHHHH
Confidence 99999999999 778999999997 999999999985 456677899999999999999999 99999999999
Q ss_pred HHHHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHhcC-ccCCCeEee
Q 011466 234 IIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNSIARIINKHHFSRLKNLLND-PMVKDSIVY 312 (485)
Q Consensus 234 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~-~~~g~~~~~ 312 (485)
+++|+| +|+||.|++++|||||+++||+|+++|+++ .||++++++.+++.+++++ ...|+++ +
T Consensus 234 iv~s~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~--------------~gpli~~~~~~~v~~~i~~~~~~~a~v-~ 297 (452)
T 3my7_A 234 VLMSKT-FDNGVVCASEQAVIVVDEVYDEVKERFASH--------------KAHVLSKTDADKVRKVLLIDGALNAKI-V 297 (452)
T ss_dssp HHHGGG-GGGGCCTTCEEEEEEEGGGHHHHHHHHHTT--------------TEEECCHHHHHHHHHHHEETTEECGGG-T
T ss_pred HHHHHh-CCCCCccCCCcEEEEcHHHHHHHHHHHHHh--------------CCCcCCHHHHHHHHHHHHhhcccCCeE-e
Confidence 999999 999999999999999999999999999875 4899999999999999987 3446666 4
Q ss_pred CCCcC----CCCceeecEE-------EeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCC----CCceEEEecCC
Q 011466 313 GGSVD----EANLFIEPTV-------LVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRP----KPLVIYAFTKN 377 (485)
Q Consensus 313 gg~~~----~~g~~~~Pti-------~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~~~v~t~d 377 (485)
||... ..|+|++||+ +.++++++++.+ |+||||++|++|+|+||||+++|++. |||+++|||+|
T Consensus 298 G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d 376 (452)
T 3my7_A 298 GQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQ 376 (452)
T ss_dssp TCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCT
T ss_pred cCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCC
Confidence 66532 3589999997 668899999876 89999999999999999999999985 99999999999
Q ss_pred HHHHHH---HHhhcCcceEEEcCccc
Q 011466 378 ERLQRR---MVSETSSGSIVFNDAVI 400 (485)
Q Consensus 378 ~~~~~~---~~~~~~~g~v~iN~~~~ 400 (485)
.+.+++ +++++++|+|+||++..
T Consensus 377 ~~~a~~i~~~a~~l~~G~V~VN~~~~ 402 (452)
T 3my7_A 377 DVNADRIRYFGDKMKTARILINIPTT 402 (452)
T ss_dssp TTCHHHHHHHHHHCCCSEEEESCCCC
T ss_pred HHHHHHHHHHHHhCCEEEEEECCCCC
Confidence 777666 99999999999999653
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=97.41 E-value=0.13 Score=51.35 Aligned_cols=342 Identities=14% Similarity=0.130 Sum_probs=181.7
Q ss_pred HHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhh-CC----C--hhhHhHhHHH--------HHHHHHHHHHHH
Q 011466 12 EYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQDL-GK----H--HVEAFRDEIG--------VLQKSINFALQN 76 (485)
Q Consensus 12 ~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~et-Gk----~--~~ea~~~ev~--------~~~~~l~~~~~~ 76 (485)
+.+-.++..+..+-.+.++.+.+.++++.|+-..-.++.. |. + +.-+. .|+. ...+.++.+.++
T Consensus 22 ~~ll~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~-~ei~~A~~~l~~~~~~ai~~A~~~ 100 (423)
T 4gic_A 22 DRLLAWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPR-DVLEAAWQALPAEQAKALREAAER 100 (423)
T ss_dssp HHHHCCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECH-HHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHhcccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCH-HHHHHHHhhCCHHHHHHHHHHHHH
Confidence 3444566666666677778888888887666555555443 21 1 11111 2332 223356666677
Q ss_pred HHHHhccccccccc--cccCceeEEEeecceEEEEEcCCc---hhHHHhHHHHHHHhhcCCE--EEEeCCCCchHHHHHH
Q 011466 77 LKEWMSSKKAKLPA--VAVLSYAEIVPEPLGLVLIISSWN---FPIGLSLEPLIGAIAAGNT--VVLKPSELASASSSLL 149 (485)
Q Consensus 77 ~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~l~~ALaaGN~--VVlkps~~~p~~~~~l 149 (485)
++.+.+.+...... ...|.....++.|+--|++..|.- ||- +++..++||-.+|+. |+.-|.+........|
T Consensus 101 I~~fh~~Q~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL 179 (423)
T 4gic_A 101 IRAYAERQKLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPRGELNALVL 179 (423)
T ss_dssp HHHHHHHHCCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHH
T ss_pred HHHHHHhcccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCCCCccHHHH
Confidence 77666555433221 123456677889999999999953 664 455667899999986 3344543321111222
Q ss_pred HHHcccccCcCceeecc-CChhHHHhHhh---C-C-CCEEEEECCHHHHHHHHHHHhcccCceeeec-CccCcEEEe-CC
Q 011466 150 ANALPTYIDSKAIKVIE-GGPAVGEHLLQ---Q-K-WDKIFFTGSTRVGRMVMSAAVKHLTPITLEL-GGKCPAIID-SL 221 (485)
Q Consensus 150 ~~~~~~alP~g~v~vv~-g~~~~~~~L~~---~-~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lel-gG~~~~iV~-~~ 221 (485)
+.+-.. |+=.+.. ||.+...+|.- . + ||+|+=.|..-+...=.... ..+-..+ .|.+=++|. +
T Consensus 180 ~AA~l~----Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~----g~VgIDm~AGPSEilViAD- 250 (423)
T 4gic_A 180 AAAYIS----GVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVF----GQVGIDMVAGPSEILVISD- 250 (423)
T ss_dssp HHHHHH----TCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHB----TTBEECCCCCCCEEEEEEC-
T ss_pred HHHHhc----CCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhc----CCcCcccccccceEEEEeC-
Confidence 221111 2222222 34444445542 2 4 99999999877543222221 1222222 244443333 1
Q ss_pred CCCCcHHHHHHHHHHHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHh
Q 011466 222 TSSWDKEAAVKRIIVSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNSIARIINKHHFSRLKNLL 301 (485)
Q Consensus 222 ~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i 301 (485)
+++|.+..+.+++.-+= +... .+.++|..+ ++|.++..+.+.+..-.-| .. +...+-+
T Consensus 251 -~~a~p~~vAaDLlsQAE-Hd~~-----a~~iLvT~s--~~la~~V~~~i~~~l~~l~----------r~---~i~~~sl 308 (423)
T 4gic_A 251 -GRTDPDWIAMDLFSQAE-HDED-----AQAILISPD--AAHLEAVQASIERLLPGME----------RA---EVIRTSL 308 (423)
T ss_dssp -SCSCHHHHHHHHHHHHT-TCTT-----CEEEEEESC--HHHHHHHHHHHHHHGGGCT----------TH---HHHHHHH
T ss_pred -CCCCHHHHHHHHHHhhc-cCCC-----CeEEEEeCc--HHHHHHHHHHHHHHHhhCc----------cH---HHHHHHH
Confidence 45899999988887654 3222 345677666 5666666666554421100 11 1111111
Q ss_pred cCccCCCeEeeCCCcCCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011466 302 NDPMVKDSIVYGGSVDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQ 381 (485)
Q Consensus 302 ~~~~~g~~~~~gg~~~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~ 381 (485)
+. +| .++.++|++|+++++|..-.= ..-|.++|..
T Consensus 309 ~~---------------------------------------~g---~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~-- 343 (423)
T 4gic_A 309 ER---------------------------------------RG---GMILVDDLEQAAAVANRIAPE-HLELSVESPE-- 343 (423)
T ss_dssp HH---------------------------------------HC---EEEECSSHHHHHHHHHHHCCS-EEEEESSCHH--
T ss_pred hc---------------------------------------Cc---eEEEEeehHHHHHHHHhhChH-HhhhhhCCHH--
Confidence 11 11 355679999999999994322 4567788874
Q ss_pred HHHHhhcC-cceEEEcCcccc-------ccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEeC
Q 011466 382 RRMVSETS-SGSIVFNDAVIQ-------FVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRRS 439 (485)
Q Consensus 382 ~~~~~~~~-~g~v~iN~~~~~-------~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 439 (485)
.+..+++ +|.|++...+.- ..++.+|-+| ..|+.+.-+...|. |.+.+..
T Consensus 344 -~~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~G-----~Ar~~sgLsv~~F~--K~~s~~~ 401 (423)
T 4gic_A 344 -VLVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPTSG-----TARFSSPLGVYDFQ--KRSSLIY 401 (423)
T ss_dssp -HHGGGCCCCSEEEEC----------------CCCCTT-----GGGTCCCCCGGGGE--EEEEEEC
T ss_pred -HHHhhCcEeceeecCCCCchhhhhcCcCCCccCCCCC-----cccccCCCCHHHee--eeeeEEE
Confidence 4556654 899999864432 1244566554 45555555678888 4444443
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=96.17 E-value=1.2 Score=44.44 Aligned_cols=329 Identities=17% Similarity=0.200 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCC----hhhHhHhHHH--------HHHHHHHHHHHHHHHHhccccccccc
Q 011466 23 SWRKLQLQRLKAFLKEKERDIYRALNQDLGKH----HVEAFRDEIG--------VLQKSINFALQNLKEWMSSKKAKLPA 90 (485)
Q Consensus 23 ~~R~~~L~~~a~~l~~~~~~la~~~~~etGk~----~~ea~~~ev~--------~~~~~l~~~~~~~~~~~~~~~~~~~~ 90 (485)
.+-.+.++.+.+.++++.|+-..-.++..-+. +.-+. .|+. ...+.++.+.++++.+.+.+......
T Consensus 30 ~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~-~ei~~A~~~~~~~~~~ai~~A~~nI~~fH~~Q~~~~~~ 108 (434)
T 1kae_A 30 ESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSA-EEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVD 108 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSSCCCCSBCCH-HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCccccccCH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 44555667777777777766555555443221 11111 2332 33445667777777777665433211
Q ss_pred --cccCceeEEEeecceEEEEEcCC---chhHHHhHHHHHHHhhcCCEEEEe--CCCCchHHHHHHHHHcccccCcCcee
Q 011466 91 --VAVLSYAEIVPEPLGLVLIISSW---NFPIGLSLEPLIGAIAAGNTVVLK--PSELASASSSLLANALPTYIDSKAIK 163 (485)
Q Consensus 91 --~~~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~VVlk--ps~~~p~~~~~l~~~~~~alP~g~v~ 163 (485)
...|.....+..|+--|++..|. -|| ++.+...+||-.+|+.=|+- |..-.|.+ +..+.+. |+=.
T Consensus 109 ~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~i~p~i-L~AA~l~------Gv~e 180 (434)
T 1kae_A 109 VETQPGVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSPPPIADEI-LYAAQLC------GVQD 180 (434)
T ss_dssp EEEETTEEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEECSSCCHHH-HHHHHHT------TCCE
T ss_pred EEecCCcEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEECCCCCCHHH-HHHHHHc------CCCE
Confidence 12344566778899999999996 466 45556678999999865543 43222322 1112221 2222
Q ss_pred ecc-CChhHHHhHh---hC-C-CCEEEEECCHHHHHHHHHHHhcccCceeeec-CccCcEEEe-CCCCCCcHHHHHHHHH
Q 011466 164 VIE-GGPAVGEHLL---QQ-K-WDKIFFTGSTRVGRMVMSAAVKHLTPITLEL-GGKCPAIID-SLTSSWDKEAAVKRII 235 (485)
Q Consensus 164 vv~-g~~~~~~~L~---~~-~-v~~v~ftGs~~~g~~i~~~a~~~~~p~~lel-gG~~~~iV~-~~~~daDl~~aa~~i~ 235 (485)
+.. ||.....+|. +. + ||+|+=.|..-+...=...... ...+-..+ .|.+=+.|. + +++|.+..+.+++
T Consensus 181 Iy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~-~G~VgIDm~AGPSEilViAD--~tAnp~~vAaDLL 257 (434)
T 1kae_A 181 VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQR-LDGAAIDMPAGPSEVLVIAD--SGATPDFVASDLL 257 (434)
T ss_dssp EEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHC-TTSCEESCCCCCCEEEEEEC--TTSCHHHHHHHHH
T ss_pred EeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhh-cCccccCCCCCCceEEEEeC--CCCCHHHHHHHHH
Confidence 222 3444444443 22 4 9999988887643321111000 11222222 244443333 1 5689999998888
Q ss_pred HHhccCCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHhcCccCCCeEeeCCC
Q 011466 236 VSKYGPCAGQACIAIDYLLVEEKFTSTLVELLKVHIKKMLGENPRKSNSIARIINKHHFSRLKNLLNDPMVKDSIVYGGS 315 (485)
Q Consensus 236 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~~~~g~~~~~gg~ 315 (485)
.-+= +.- ..+.++|..+ +++.++..+.+.+..-.-| +.+..++-++
T Consensus 258 sQAE--Hd~----~a~aiLvT~s--~~la~~V~~ev~~ql~~lp-------------r~~ia~~sl~------------- 303 (434)
T 1kae_A 258 SQAE--HGP----DSQVILLTPA--ADMARRVAEAVERQLAELP-------------RAETARQALN------------- 303 (434)
T ss_dssp HHHT--TCT----TCEEEEEESC--HHHHHHHHHHHHHHHTTCT-------------THHHHHHHHT-------------
T ss_pred HHhc--cCC----CCcEEEEECC--HHHHHHHHHHHHHHHHhCC-------------hHHHHHHHHH-------------
Confidence 7654 322 2445667666 4566665555544321000 1111122111
Q ss_pred cCCCCceeecEEEeCCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-CcceEE
Q 011466 316 VDEANLFIEPTVLVDPPLQAAIMTEEIFGPLLPIITLKRIEDSIDFINSRPKPLVIYAFTKNERLQRRMVSET-SSGSIV 394 (485)
Q Consensus 316 ~~~~g~~~~Pti~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~-~~g~v~ 394 (485)
.- .++-++|++||++++|..-.= -.-|.++|.. .+..++ ++|.|+
T Consensus 304 -----------------------------~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~---~~l~~I~nAGaIF 349 (434)
T 1kae_A 304 -----------------------------AS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVF 349 (434)
T ss_dssp -----------------------------TC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCSCSEEE
T ss_pred -----------------------------cC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHH---HHHhhcCcccchh
Confidence 12 466789999999999995332 4577888874 444555 489999
Q ss_pred EcCcccc-------ccCCCCCcccCCCCCCCCcchHHHHHHhhccccEEEe
Q 011466 395 FNDAVIQ-------FVADTLPFGGIGESGIGSYHGKFSFDAFSHHKPVVRR 438 (485)
Q Consensus 395 iN~~~~~-------~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 438 (485)
+...+.- ..|+.+|-+| ..|+.+.-+++.|+ |.+.+.
T Consensus 350 lG~~tpe~~GDY~aG~NHvLPT~G-----~AR~~sgLsV~~F~--K~~s~~ 393 (434)
T 1kae_A 350 LGDWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQ--KRMTVQ 393 (434)
T ss_dssp ESTTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCSCGGGGE--EEEEEE
T ss_pred cCCCCchhhcccccCCCcccCCCC-----ceeccCCCcHHhcc--ceeeEE
Confidence 9975431 2456677765 44555555678888 444444
No 55
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=59.78 E-value=9 Score=34.90 Aligned_cols=67 Identities=13% Similarity=0.132 Sum_probs=45.4
Q ss_pred hHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccccCcCceeeccCChhHHHhHhhCCCCEEEEECCHHH
Q 011466 120 SLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTYIDSKAIKVIEGGPAVGEHLLQQKWDKIFFTGSTRV 191 (485)
Q Consensus 120 ~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~alP~g~v~vv~g~~~~~~~L~~~~v~~v~ftGs~~~ 191 (485)
.+..++..+.+||-||++.++ +.....+..++...+|.+++++++.+.+- .-...-+.+.++.+...
T Consensus 20 ~F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~lLP~~c~~l~~~s~~Y---~~~~~cnilgls~~v~i 86 (226)
T 3v42_A 20 SFRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTMLPVGCVRIIPYSSQY---EEAYRCNFLGLSPHVQI 86 (226)
T ss_dssp HHHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGGSCGGGCCEEEEESSC---CCTTTCSEEEECTTCCC
T ss_pred HHHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHhCCHHHHhccccchhh---cchhheeeecCCCCccc
Confidence 345667788899999999976 44455567778888999999998653221 11123666766666553
No 56
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=38.96 E-value=37 Score=26.33 Aligned_cols=21 Identities=24% Similarity=0.308 Sum_probs=17.9
Q ss_pred eeeeeecCCHHHHHHHHhcCC
Q 011466 346 LLPIITLKRIEDSIDFINSRP 366 (485)
Q Consensus 346 vl~v~~~~~~~eai~~~n~~~ 366 (485)
-+.|+.|.|.+.|.++.|+-+
T Consensus 55 ~~viieFpS~~aa~~~~~s~~ 75 (99)
T 2fiu_A 55 RNVVIEFPSVQHAIDCYNSPE 75 (99)
T ss_dssp EEEEEEESSHHHHHHHHHSHH
T ss_pred eEEEEECCCHHHHHHHHcCHH
Confidence 678999999999999988643
No 57
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=38.04 E-value=1.4e+02 Score=25.96 Aligned_cols=37 Identities=22% Similarity=0.281 Sum_probs=27.9
Q ss_pred hcCCEEEEeCCCCchHHHHHHHHHcccc-cCcCceeeccCC
Q 011466 129 AAGNTVVLKPSELASASSSLLANALPTY-IDSKAIKVIEGG 168 (485)
Q Consensus 129 aaGN~VVlkps~~~p~~~~~l~~~~~~a-lP~g~v~vv~g~ 168 (485)
.+||-+|+|..|-+ +..++.++... +|++++-.|-|+
T Consensus 115 ~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGD 152 (180)
T 3v4g_A 115 HNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGD 152 (180)
T ss_dssp ECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecC
Confidence 47999999987554 66677777775 787787777764
No 58
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=29.95 E-value=68 Score=27.09 Aligned_cols=97 Identities=12% Similarity=0.093 Sum_probs=62.0
Q ss_pred eEEEEEcCCc-hhHHHhHHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccccCcCceeeccC--ChhHHHhHhhCCCC
Q 011466 105 GLVLIISSWN-FPIGLSLEPLIGAIAAGNTVVLKPSELASASSSLLANALPTYIDSKAIKVIEG--GPAVGEHLLQQKWD 181 (485)
Q Consensus 105 GVv~~i~p~n-~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~alP~g~v~vv~g--~~~~~~~L~~~~v~ 181 (485)
|.|+++..-+ =+-...+.+-...+.+|..++--. -|+..|.+. .++|-..++=++. ++.+++.+.+..|+
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT~-----gTa~~L~e~--~Gl~v~~v~k~~eGG~p~I~d~I~~geId 84 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATG-----TTGNLISRA--TGMNVNAMLSGPMGGDQQVGALISEGKID 84 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEET-----THHHHHHHH--HCCCCEEECCGGGTHHHHHHHHHHTTCCC
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEcc-----HHHHHHHHH--hCceeEEEEecCCCCCchHHHHHHCCCcc
Confidence 6555554433 355555566666777898888643 355555542 2377666654442 34455555555699
Q ss_pred EEEEECC-------HHHHHHHHHHHhcccCceee
Q 011466 182 KIFFTGS-------TRVGRMVMSAAVKHLTPITL 208 (485)
Q Consensus 182 ~v~ftGs-------~~~g~~i~~~a~~~~~p~~l 208 (485)
.|+||=+ ...+..|.+.|.....|+..
T Consensus 85 lVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 118 (152)
T 1b93_A 85 VLIFFWDPLNAVPHDPDVKALLRLATVWNIPVAT 118 (152)
T ss_dssp EEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEES
T ss_pred EEEEcCCcccCCcccccHHHHHHHHHHcCCCEEe
Confidence 9999866 56788899999887777553
No 59
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=28.29 E-value=1e+02 Score=21.46 Aligned_cols=36 Identities=14% Similarity=0.082 Sum_probs=26.1
Q ss_pred HHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 011466 9 DMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIY 44 (485)
Q Consensus 9 ~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 44 (485)
.++.....|+.+|.++|..........-++...++.
T Consensus 29 i~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 29 KLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566789999999999888777666655555554
No 60
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=25.79 E-value=75 Score=26.33 Aligned_cols=73 Identities=11% Similarity=0.133 Sum_probs=48.5
Q ss_pred cCCEEEEeCCCCchHHHHHHHHHcccccCcCceeeccCC------hhHHHhHhhCCCCEEEEECCH-----HHHHHHHHH
Q 011466 130 AGNTVVLKPSELASASSSLLANALPTYIDSKAIKVIEGG------PAVGEHLLQQKWDKIFFTGST-----RVGRMVMSA 198 (485)
Q Consensus 130 aGN~VVlkps~~~p~~~~~l~~~~~~alP~g~v~vv~g~------~~~~~~L~~~~v~~v~ftGs~-----~~g~~i~~~ 198 (485)
.|-.++- |.-|+..|.+ .++|-..++-++.+ +.+.+.+.+..|+.|++|-+. ..+..|.+.
T Consensus 49 lGf~i~A-----T~GTa~~L~~---~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVInt~~~~~~~~~d~~~iRR~ 120 (143)
T 2yvq_A 49 EGFKLFA-----TEATSDWLNA---NNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRT 120 (143)
T ss_dssp TTCEEEE-----EHHHHHHHHH---TTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEECCCCCGGGHHHHHHHHHH
T ss_pred CCCEEEE-----CchHHHHHHH---cCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEECCCCCCcCCccHHHHHHH
Confidence 3776654 3445554432 23887777766543 456666655679999997554 478889999
Q ss_pred HhcccCceeeec
Q 011466 199 AVKHLTPITLEL 210 (485)
Q Consensus 199 a~~~~~p~~lel 210 (485)
|..+..|++..+
T Consensus 121 Av~~~IP~~T~~ 132 (143)
T 2yvq_A 121 AVDSGIPLLTNF 132 (143)
T ss_dssp HHHTTCCEECSH
T ss_pred HHHhCCCeEcCH
Confidence 988888877554
No 61
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=24.75 E-value=84 Score=20.57 Aligned_cols=28 Identities=25% Similarity=0.361 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHhhC
Q 011466 25 RKLQLQRLKAFLKEKERDIYRALNQDLG 52 (485)
Q Consensus 25 R~~~L~~~a~~l~~~~~~la~~~~~etG 52 (485)
..++|..+...|.+-++++.+++..|..
T Consensus 13 KqEIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 13 KQELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578888888888888888888876643
No 62
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=24.72 E-value=1.8e+02 Score=25.01 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHh----HHHHHHHHHHhhCCChhhHh
Q 011466 25 RKLQLQRLKAFLKEK----ERDIYRALNQDLGKHHVEAF 59 (485)
Q Consensus 25 R~~~L~~~a~~l~~~----~~~la~~~~~etGk~~~ea~ 59 (485)
|.+...++.++|.++ .+||++.+..+ |-...++.
T Consensus 18 K~~R~~~I~~iI~~~~I~tQeEL~~~L~~~-Gi~vTQAT 55 (170)
T 3lap_A 18 RAGRQARIVAILSSAQVRSQNELAALLAAE-GIEVTQAT 55 (170)
T ss_dssp HHHHHHHHHHHHHHSCCCSHHHHHHHHHHT-TCCCCHHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHc-CCCcCchh
Confidence 444455677777775 89999999877 87777665
No 63
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=24.17 E-value=1.9e+02 Score=22.16 Aligned_cols=41 Identities=7% Similarity=-0.110 Sum_probs=29.2
Q ss_pred HHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 011466 9 DMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALNQ 49 (485)
Q Consensus 9 ~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~ 49 (485)
.++..-..|+.++.++|..+.......-+++..++..--..
T Consensus 48 isk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~~~ 88 (102)
T 2co9_A 48 VSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRAS 88 (102)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34555567999999999988887777666666666554433
No 64
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=22.34 E-value=33 Score=28.45 Aligned_cols=81 Identities=11% Similarity=0.115 Sum_probs=50.3
Q ss_pred HHHHHHHhhcCCEEEEeCCCCchHHHHHHHHHcccccCcCceeecc-C-ChhHHHhHhhCCCCEEEEECC-------HHH
Q 011466 121 LEPLIGAIAAGNTVVLKPSELASASSSLLANALPTYIDSKAIKVIE-G-GPAVGEHLLQQKWDKIFFTGS-------TRV 191 (485)
Q Consensus 121 ~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~~~~alP~g~v~vv~-g-~~~~~~~L~~~~v~~v~ftGs-------~~~ 191 (485)
+.+-...+..|..++- |.-|+..|.+. .++|-..++=++ + ++.+++.+.+..|+.|+||=+ ...
T Consensus 21 ~a~~~~~ll~Gf~l~A-----T~gTa~~L~e~--~Gl~v~~v~k~~~eG~p~I~d~I~~geIdlVInt~~pl~~~~h~~D 93 (134)
T 2xw6_A 21 FCQRHREVLARFPLVA-----TGTTGRRIEEA--TGLTVEKLLSGPLGGDQQMGARVAEGRILAVIFFRDPLTAQPHEPD 93 (134)
T ss_dssp HHHHTHHHHTTSCEEE-----CHHHHHHHHHH--HCCCCEECSCGGGTHHHHHHHHHHTTCEEEEEEECCTTTCCTTSCC
T ss_pred HHHHHHHHhCCCEEEE-----ccHHHHHHHHh--hCceEEEEEecCCCCcchHHHHHHCCCccEEEEccCcccCCCccch
Confidence 3333444555666554 44566555552 247776666666 5 455666665557999999977 335
Q ss_pred HHHHHHHHhcccCceee
Q 011466 192 GRMVMSAAVKHLTPITL 208 (485)
Q Consensus 192 g~~i~~~a~~~~~p~~l 208 (485)
+..|.+.+.....|+..
T Consensus 94 ~~~IrR~A~~~~IP~~T 110 (134)
T 2xw6_A 94 VQALLRVCDVHGVPLAT 110 (134)
T ss_dssp SHHHHHHHHHHTCCEEC
T ss_pred HHHHHHHHHHcCCCeEc
Confidence 67788888777667553
No 65
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=22.03 E-value=99 Score=23.53 Aligned_cols=23 Identities=17% Similarity=0.223 Sum_probs=19.1
Q ss_pred ceeeeeecCCHHHHHHHHhcCCC
Q 011466 345 PLLPIITLKRIEDSIDFINSRPK 367 (485)
Q Consensus 345 Pvl~v~~~~~~~eai~~~n~~~~ 367 (485)
..+.|+.|.|.+.|.++.|+-.|
T Consensus 53 ~~~viieFps~~aa~a~y~SpeY 75 (94)
T 3lo3_A 53 KAQVILEFPSREDAYNWYHSEEY 75 (94)
T ss_dssp SEEEEEEESSHHHHHHHHHSHHH
T ss_pred CeEEEEECCCHHHHHHHHCCHHH
Confidence 46789999999999999887443
No 66
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.33 E-value=1.5e+02 Score=21.90 Aligned_cols=37 Identities=14% Similarity=-0.058 Sum_probs=27.0
Q ss_pred HHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 011466 8 QDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIY 44 (485)
Q Consensus 8 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 44 (485)
+.++.....|+.++.++|..+.......-+++..++.
T Consensus 47 eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 83 (86)
T 2eqz_A 47 EFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMK 83 (86)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666789999999998888777766666655554
No 67
>1v63_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: a.21.1.1
Probab=21.15 E-value=1.8e+02 Score=22.34 Aligned_cols=41 Identities=7% Similarity=-0.087 Sum_probs=32.0
Q ss_pred HHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 011466 8 QDMREYYRSGKTKEASWRKLQLQRLKAFLKEKERDIYRALN 48 (485)
Q Consensus 8 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~ 48 (485)
+.++.....|+.++.+++..+.......-+++..++..-..
T Consensus 36 eisK~lge~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~~ 76 (101)
T 1v63_A 36 ERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVK 76 (101)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45667778899999999999988887777777777775443
Done!