BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011468
(485 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3EM5|A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev
B 2), A Major Allergen From Hevea Brasiliensis
pdb|3EM5|B Chain B, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev
B 2), A Major Allergen From Hevea Brasiliensis
pdb|3EM5|C Chain C, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev
B 2), A Major Allergen From Hevea Brasiliensis
pdb|3EM5|D Chain D, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev
B 2), A Major Allergen From Hevea Brasiliensis
pdb|3F55|A Chain A, Crystal Structure Of The Native Endo Beta-1,3-Glucanase
(Hev B 2), A Major Allergen From Hevea Brasiliensis
(Space Group P41)
pdb|3F55|B Chain B, Crystal Structure Of The Native Endo Beta-1,3-Glucanase
(Hev B 2), A Major Allergen From Hevea Brasiliensis
(Space Group P41)
pdb|3F55|C Chain C, Crystal Structure Of The Native Endo Beta-1,3-Glucanase
(Hev B 2), A Major Allergen From Hevea Brasiliensis
(Space Group P41)
pdb|3F55|D Chain D, Crystal Structure Of The Native Endo Beta-1,3-Glucanase
(Hev B 2), A Major Allergen From Hevea Brasiliensis
(Space Group P41)
Length = 316
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 177/327 (54%), Gaps = 15/327 (4%)
Query: 24 IGVNWGTNASHPLPPAKVVELLKSNNIAKVKLFDADPLVLEALSGSNIGVTVGIPXXXXX 83
+GV +G ++ P ++V+ L K +NI +++++D + VLEAL GSNI + +G+P
Sbjct: 2 VGVCYGMQGNNLPPVSEVIALYKKSNITRMRIYDPNQAVLEALRGSNIELILGVPNSDLQ 61
Query: 84 XXXXXXXAAESWVHDNVTRYFSAGHGNGVRFEYVALGDE-PFLQSYSEQFHPFIIGAAMN 142
A +SWV NV ++S+ VRF Y+A+G+E + + F++ A N
Sbjct: 62 SLTNPSNA-KSWVQKNVRGFWSS-----VRFRYIAVGNEISPVNRGTAWLAQFVLPAMRN 115
Query: 143 IQIALGRANLASEVKVVVPCSFDTFLSESGKPSGGHFRPDLNKTMIELLEFLSKHHSPFF 202
I A+ A L ++KV T + S PS G FR D+ + ++ FLS SP
Sbjct: 116 IHDAIRSAGLQDQIKVSTAIDL-TLVGNSYPPSAGAFRDDVRSYLNPIIRFLSSIRSPLL 174
Query: 203 VTISPFISFHQN-KNISLDFALFKETAHPHKDSHKTYKNSFDLSYDTLVTALSTVGFPEM 261
I P+ ++ N ++ISL +ALF + D + YKN FD + D L +AL +
Sbjct: 175 ANIYPYFTYAGNPRDISLPYALFTSPSVVVWDGQRGYKNLFDATLDALYSALERASGGSL 234
Query: 262 DIVVAQIGWPTDGVANATSSTAEIFMKGLINHLRSRSGTPLRPRNPPIETYIYSLLDEDQ 321
++VV++ GWP+ G AT ++ LI H+ + GTP RP+ IETY++++ DE++
Sbjct: 235 EVVVSESGWPSAGAFAATFDNGRTYLSNLIQHV--KRGTPKRPKR-AIETYLFAMFDENK 291
Query: 322 RRTATGNFERHWGVFTFDGQAKYHLNF 348
++ E+H+G+F + KY+LNF
Sbjct: 292 KQPEV---EKHFGLFFPNKWQKYNLNF 315
>pdb|3UR7|A Chain A, Higher-density Crystal Structure Of Potato
Endo-1,3-beta-glucanase
pdb|3UR7|B Chain B, Higher-density Crystal Structure Of Potato
Endo-1,3-beta-glucanase
pdb|3UR8|A Chain A, Lower-density Crystal Structure Of Potato
Endo-1,3-beta-glucanase
pdb|3UR8|B Chain B, Lower-density Crystal Structure Of Potato
Endo-1,3-beta-glucanase
Length = 323
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 170/329 (51%), Gaps = 15/329 (4%)
Query: 24 IGVNWGTNASHPLPPAKVVELLKSNNIAKVKLFDADPLVLEALSGSNIGVTVGIPXXXXX 83
IGV +G A++ V++L +NNI K++++ V AL GSNI + + +P
Sbjct: 3 IGVCYGKIANNLPSDQDVIKLYNANNIKKMRIYYPHTNVFNALKGSNIEIILDVPNQDLE 62
Query: 84 XXXXXXXAAESWVHDNVTRYFSAGHGNGVRFEYVALGDEPFLQSYSEQFHPFIIGAAMNI 143
A WV DN+ +F V+F+Y+A+G+E S ++ F+ A NI
Sbjct: 63 ALANPSNA-NGWVQDNIRNHFP-----DVKFKYIAVGNEVDPGRESGKYARFVGPAMENI 116
Query: 144 QIALGRANLASEVKVVVPCSFDTFLSESGKPSGGHFRPDLNKTMIELLEFLSKHHSPFFV 203
AL A L +++KV ++ L+ + P FR + + ++ FL++H+ P
Sbjct: 117 YNALSSAGLQNQIKVST-STYSGLLTNTYPPRDSIFREEYKSFINPIIGFLARHNLPLLA 175
Query: 204 TISPFISFHQNKN-ISLDFALFKETAHPHKDSHKTYKNSFDLSYDTLVTALSTVGFPEMD 262
I P+ N N + L +ALF + + + Y+N FD D++ A +G ++
Sbjct: 176 NIYPYFGHIDNTNAVPLSYALFNQ----QRRNDTGYQNLFDALVDSMYFATEKLGGQNIE 231
Query: 263 IVVAQIGWPTDGVANATSSTAEIFMKGLINHLRSRSGTPLRPRNPPIETYIYSLLDEDQR 322
I+V++ GWP++G AT A + LINH++ +GTP +P IETY++++ DE+++
Sbjct: 232 IIVSESGWPSEGHPAATLKNARTYYTNLINHVKRGAGTPKKP-GKTIETYLFAMFDENEK 290
Query: 323 RTATGNFERHWGVFTFDGQAKYHLNFGQN 351
+ E+H+G+F D + KY LNF N
Sbjct: 291 KGEAS--EKHFGLFNPDQRPKYQLNFNLN 317
>pdb|4GZI|A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In
Complex With Laminaratriose
pdb|4GZJ|A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In
Complex With Laminaratriose And Laminaratetrose
Length = 323
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 169/329 (51%), Gaps = 15/329 (4%)
Query: 24 IGVNWGTNASHPLPPAKVVELLKSNNIAKVKLFDADPLVLEALSGSNIGVTVGIPXXXXX 83
IGV +G A++ V++L +NNI K++++ V AL GSNI + + +P
Sbjct: 3 IGVCYGKIANNLPSDQDVIKLYNANNIKKMRIYYPHTNVFNALKGSNIEIILDVPNQDLE 62
Query: 84 XXXXXXXAAESWVHDNVTRYFSAGHGNGVRFEYVALGDEPFLQSYSEQFHPFIIGAAMNI 143
A WV DN+ +F V+F+Y+A+G+E S ++ F+ A NI
Sbjct: 63 ALANPSNA-NGWVQDNIRNHFP-----DVKFKYIAVGNEVDPGRESGKYARFVGPAMENI 116
Query: 144 QIALGRANLASEVKVVVPCSFDTFLSESGKPSGGHFRPDLNKTMIELLEFLSKHHSPFFV 203
AL A L +++KV ++ L+ + P FR + + ++ FL++H+ P
Sbjct: 117 YNALSSAGLQNQIKVST-STYSGLLTNTYPPRDSIFREEYKSFINPIIGFLARHNLPLLA 175
Query: 204 TISPFISFHQNKN-ISLDFALFKETAHPHKDSHKTYKNSFDLSYDTLVTALSTVGFPEMD 262
I P+ N N + L +ALF + + + Y+N FD D++ A +G ++
Sbjct: 176 NIYPYFGHIDNTNAVPLSYALFNQ----QRRNDTGYQNLFDALVDSMYFATEKLGGQNIE 231
Query: 263 IVVAQIGWPTDGVANATSSTAEIFMKGLINHLRSRSGTPLRPRNPPIETYIYSLLDEDQR 322
I+V+ GWP++G AT A + LINH++ +GTP +P IETY++++ DE+++
Sbjct: 232 IIVSASGWPSEGHPAATLKNARTYYTNLINHVKRGAGTPKKP-GKTIETYLFAMFDENEK 290
Query: 323 RTATGNFERHWGVFTFDGQAKYHLNFGQN 351
+ E+H+G+F D + KY LNF N
Sbjct: 291 KGEAS--EKHFGLFNPDQRPKYQLNFNLN 317
>pdb|2CYG|A Chain A, Crystal Structure At 1.45- Resolution Of The Major
Allergen Endo-Beta-1,3-Glucanase Of Banana As A
Molecular Basis For The Latex-Fruit Syndrome
Length = 312
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 175/328 (53%), Gaps = 19/328 (5%)
Query: 24 IGVNWGTNASHPLPPAKVVELLKSNNIAKVKLFDADPLVLEALSGSNIGVTVGIPXXXXX 83
IGV +G ++ PP++VV L KSNNIA+++L+D + L+AL SNI V + +P
Sbjct: 1 IGVCYGMLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQ 60
Query: 84 XXXXXXXAAESWVHDNVTRYFSAGHGNGVRFEYVALGDEPFLQSYSEQFHPFIIGAAMNI 143
AA W+ NV Y+ + V F Y+A+G+E S Q +I+ A NI
Sbjct: 61 SLASNPSAAGDWIRRNVVAYWPS-----VSFRYIAVGNELIPGSDLAQ---YILPAMRNI 112
Query: 144 QIALGRANLASEVKVVVPCSFDT-FLSESGKPSGGHFRPDLNKTMIELLEFLSKHHSPFF 202
AL A L +++KV + DT L S PS G F + +++FL+ + +P
Sbjct: 113 YNALSSAGLQNQIKVS--TAVDTGVLGTSYPPSAGAFSSAAQAYLSPIVQFLASNGAPLL 170
Query: 203 VTISPFISFHQNK-NISLDFALFKETAHPHKDSHKTYKNSFDLSYDTLVTALSTVGFPEM 261
V + P+ S+ N ISL +ALF + +D +Y+N FD D + AL VG +
Sbjct: 171 VNVYPYFSYTGNPGQISLPYALFTASGVVVQDGRFSYQNLFDAIVDAVFAALERVGGANV 230
Query: 262 DIVVAQIGWPT-DGVANATSSTAEIFMKGLINHLRSRSGTPLRPRNPPIETYIYSLLDED 320
+VV++ GWP+ G A A++S A+ + + LI H+ GTP RP IE YI+ + +E+
Sbjct: 231 AVVVSESGWPSAGGGAEASTSNAQTYNQNLIRHV--GGGTPRRP-GKEIEAYIFEMFNEN 287
Query: 321 QRRTATGNFERHWGVFTFDGQAKYHLNF 348
Q+ G E+++G+F + Q Y ++F
Sbjct: 288 QK---AGGIEQNFGLFYPNKQPVYQISF 312
>pdb|1AQ0|A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group
pdb|1AQ0|B Chain B, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group
pdb|1GHR|A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan
Endohydrolases With Distinct Substrate Specificities
Length = 306
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 160/326 (49%), Gaps = 21/326 (6%)
Query: 24 IGVNWGTNASHPLPPAKVVELLKSNNIAKVKLFDADPLVLEALSGSNIGVTVGIPXXXXX 83
IGV +G +A++ + VV + KSN I ++L+ + L+A+ G+ I V VG P
Sbjct: 1 IGVCYGMSANNLPAASTVVSMFKSNGIKSMRLYAPNQAALQAVGGTGINVVVGAPNDVLS 60
Query: 84 XXXXXXXAAESWVHDNVTRYFSAGHGNGVRFEYVALGDEPFLQSYSEQFHPFIIGAAMNI 143
AA SWV N+ Y V F YV +G+E + P A N+
Sbjct: 61 NLAASPAAAASWVKSNIQAYPK------VSFRYVCVGNE-VAGGATRNLVP----AMKNV 109
Query: 144 QIALGRANLASEVKVVVPCSFDTFLSESGKPSGGHFRPDLNKTMIELLEFLSKHHSPFFV 203
AL A L +KV S L PS G F + M +++FL++ ++P
Sbjct: 110 HGALVAAGLG-HIKVTTSVS-QAILGVFSPPSAGSFTGEAAAFMGPVVQFLARTNAPLMA 167
Query: 204 TISPFISFHQNKN-ISLDFALFKETAHPHKDSHKTYKNSFDLSYDTLVTALSTVGFPEMD 262
I P++++ N + + + +ALF + +D Y+N FD + D TA+ G +
Sbjct: 168 NIYPYLAWAYNPSAMDMGYALFNASGTVVRDGAYGYQNLFDTTVDAFYTAMGKHGGSSVK 227
Query: 263 IVVAQIGWPTDGVANATSSTAEIFMKGLINHLRSRSGTPLRPRNPPIETYIYSLLDEDQR 322
+VV++ GWP+ G AT + A + + LINH+ GTP P IETYI+++ +E+Q+
Sbjct: 228 LVVSESGWPSGGGTAATPANARFYNQHLINHV--GRGTPRHPG--AIETYIFAMFNENQK 283
Query: 323 RTATGNFERHWGVFTFDGQAKYHLNF 348
+ E++WG+F + Q Y +NF
Sbjct: 284 DSGV---EQNWGLFYPNMQHVYPINF 306
>pdb|1GHS|A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan
Endohydrolases With Distinct Substrate Specificities
pdb|1GHS|B Chain B, The Three-Dimensional Structures Of Two Plant Beta-Glucan
Endohydrolases With Distinct Substrate Specificities
Length = 306
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 165/328 (50%), Gaps = 25/328 (7%)
Query: 24 IGVNWGTNASHPLPPAKVVELLKSNNIAKVKLFDADPLVLEALSGSNIGVTVGIPXXXXX 83
IGV +G ++ + VV+L +S I ++++ AD L AL S IG+ + I
Sbjct: 1 IGVCYGVIGNNLPSRSDVVQLYRSKGINGMRIYFADGQALSALRNSGIGLILDIGNDQLA 60
Query: 84 XXXXXXXAAESWVHDNVTRYFSAGHGNGVRFEYVALGDEPFLQSYSEQFHPFIIGAAMNI 143
A SWV +NV Y+ A V +Y+A G+E +Q + Q I+ A N+
Sbjct: 61 NIAASTSNAASWVQNNVRPYYPA-----VNIKYIAAGNE--VQGGATQS---ILPAMRNL 110
Query: 144 QIALGRANLASEVKVVVPCSFDTFLSESGKPSGGHFRPDLNKTMIELLEFLSKHHSPFFV 203
AL A +KV FD ++ S PS G F+ N M ++ L+ +P
Sbjct: 111 NAAL-SAAGLGAIKVSTSIRFDE-VANSFPPSAGVFK---NAYMTDVARLLASTGAPLLA 165
Query: 204 TISPFISFHQN-KNISLDFALFKE-TAHPHKDSHKTYKNSFDLSYDTLVTALSTVGFPEM 261
+ P+ ++ N +ISL++A F+ T +++ TY + FD D + AL G P +
Sbjct: 166 NVYPYFAYRDNPGSISLNYATFQPGTTVRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAV 225
Query: 262 DIVVAQIGWPTDGVANATSSTAEIFMKGLINHLRSRSGTPLRPRNPPIETYIYSLLDEDQ 321
+VV++ GWP+ G A++ A + +GLINH+ GTP + +ETYI+++ +E+Q
Sbjct: 226 KVVVSESGWPSAGGFAASAGNARTYNQGLINHV--GGGTP--KKREALETYIFAMFNENQ 281
Query: 322 RRTATGNF-ERHWGVFTFDGQAKYHLNF 348
+ TG+ ER +G+F D Y++ F
Sbjct: 282 K---TGDATERSFGLFNPDKSPAYNIQF 306
>pdb|2JON|A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9
Length = 101
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 368 WCVVNNNKDLSNATAIALEACSVA-DCSAISPGGSCYNISWPR-NISYAFNSYYQQHNQR 425
WCV T ACS DC I PGG+C+ + + + +Y N YYQ +
Sbjct: 13 WCVPKPGVSDDQLTGNINYACSQGIDCGPIQPGGACFEPNTVKAHAAYVMNLYYQHAGRN 72
Query: 426 HDNCDFGGLGLITTVDPSADNCRF 449
NCDF +T +PS C F
Sbjct: 73 SWNCDFSQTATLTNTNPSYGACNF 96
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 30 TNASHPLPPAKVVELLKSNNIAKVKLFD 57
+ AS P PPA+ +L +N +++VKLFD
Sbjct: 11 SRASGPEPPAEFAKLRATNPVSQVKLFD 38
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal
Nitric Oxide Reductase And Its Ser286 Mutants At
Cryogenic Temperature
Length = 402
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 30 TNASHPLPPAKVVELLKSNNIAKVKLFD 57
+ AS P PPA+ +L +N +++VKLFD
Sbjct: 10 SRASGPEPPAEFAKLRATNPVSQVKLFD 37
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 30 TNASHPLPPAKVVELLKSNNIAKVKLFD 57
+ AS P PPA+ +L +N +++VKLFD
Sbjct: 12 SRASGPEPPAEFAKLRATNPVSQVKLFD 39
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 30 TNASHPLPPAKVVELLKSNNIAKVKLFD 57
+ AS P PPA+ +L +N +++VKLFD
Sbjct: 10 SRASGPEPPAEFAKLRATNPVSQVKLFD 37
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 30 TNASHPLPPAKVVELLKSNNIAKVKLFD 57
+ AS P PPA+ +L +N +++VKLFD
Sbjct: 10 SRASGPEPPAEFAKLRATNPVSQVKLFD 37
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal
Nitric Oxide Reductase And Their Ser286 Mutants At
Cryogenic Temperature
Length = 402
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 30 TNASHPLPPAKVVELLKSNNIAKVKLFD 57
+ AS P PPA+ +L +N +++VKLFD
Sbjct: 10 SRASGPEPPAEFAKLRATNPVSQVKLFD 37
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 30 TNASHPLPPAKVVELLKSNNIAKVKLFD 57
+ AS P PPA+ +L +N +++VKLFD
Sbjct: 11 SRASGPEPPAEFAKLRATNPVSQVKLFD 38
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 30 TNASHPLPPAKVVELLKSNNIAKVKLFD 57
+ AS P PPA+ +L +N +++VKLFD
Sbjct: 10 SRASGPEPPAEFAKLRATNPVSQVKLFD 37
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 30 TNASHPLPPAKVVELLKSNNIAKVKLFD 57
+ AS P PPA+ +L +N +++VKLFD
Sbjct: 11 SRASGPEPPAEFAKLRATNPVSQVKLFD 38
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal
Nitric Oxide Reductase And Their Ser286 Mutants At
Cryogenic Temperature
Length = 402
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 30 TNASHPLPPAKVVELLKSNNIAKVKLFD 57
+ AS P PPA+ +L +N +++VKLFD
Sbjct: 10 SRASGPEPPAEFAKLRATNPVSQVKLFD 37
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 30 TNASHPLPPAKVVELLKSNNIAKVKLFD 57
+ AS P PPA+ +L +N +++VKLFD
Sbjct: 10 SRASGPEPPAEFAKLRATNPVSQVKLFD 37
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 30 TNASHPLPPAKVVELLKSNNIAKVKLFD 57
+ AS P PPA+ +L +N +++VKLFD
Sbjct: 11 SRASGPEPPAEFAKLRATNPVSQVKLFD 38
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,175,739
Number of Sequences: 62578
Number of extensions: 585154
Number of successful extensions: 1156
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1107
Number of HSP's gapped (non-prelim): 20
length of query: 485
length of database: 14,973,337
effective HSP length: 103
effective length of query: 382
effective length of database: 8,527,803
effective search space: 3257620746
effective search space used: 3257620746
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)