Query 011469
Match_columns 485
No_of_seqs 247 out of 1500
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 01:42:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011469.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011469hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 5E-121 1E-125 949.2 39.2 413 70-484 23-452 (454)
2 PLN02209 serine carboxypeptida 100.0 3E-102 6E-107 815.7 41.7 400 72-482 20-437 (437)
3 PLN03016 sinapoylglucose-malat 100.0 2E-101 4E-106 809.2 41.2 397 73-482 19-433 (433)
4 PF00450 Peptidase_S10: Serine 100.0 1E-100 3E-105 802.5 31.7 394 81-479 1-415 (415)
5 PTZ00472 serine carboxypeptida 100.0 3E-94 6.6E-99 762.8 39.7 381 85-483 41-462 (462)
6 PLN02213 sinapoylglucose-malat 100.0 4.2E-74 9.2E-79 583.7 32.4 306 165-482 1-319 (319)
7 COG2939 Carboxypeptidase C (ca 100.0 1.9E-66 4.2E-71 534.9 22.2 375 88-480 73-491 (498)
8 KOG1283 Serine carboxypeptidas 100.0 2.3E-66 4.9E-71 501.9 16.9 379 91-478 3-412 (414)
9 TIGR01250 pro_imino_pep_2 prol 99.5 7.7E-12 1.7E-16 121.8 20.5 131 91-261 2-132 (288)
10 TIGR03611 RutD pyrimidine util 99.4 6.2E-12 1.4E-16 120.7 16.8 116 107-262 2-117 (257)
11 PRK00870 haloalkane dehalogena 99.4 1.3E-10 2.9E-15 116.7 24.2 140 73-259 7-149 (302)
12 PHA02857 monoglyceride lipase; 99.3 8.4E-11 1.8E-15 116.2 20.0 125 102-262 9-134 (276)
13 TIGR03056 bchO_mg_che_rel puta 99.3 7.8E-11 1.7E-15 115.3 19.4 109 116-262 24-132 (278)
14 PRK10673 acyl-CoA esterase; Pr 99.3 2.3E-11 5E-16 118.2 14.8 104 115-258 11-114 (255)
15 PLN02824 hydrolase, alpha/beta 99.3 1E-10 2.3E-15 116.9 18.9 123 95-260 12-137 (294)
16 TIGR03343 biphenyl_bphD 2-hydr 99.3 7E-10 1.5E-14 109.5 23.7 61 394-478 221-281 (282)
17 PRK03204 haloalkane dehalogena 99.3 2.8E-10 6.1E-15 113.9 18.3 59 396-478 227-286 (286)
18 PLN02385 hydrolase; alpha/beta 99.2 3.5E-10 7.6E-15 116.4 18.9 128 102-261 70-198 (349)
19 PRK10349 carboxylesterase BioH 99.2 3.9E-10 8.4E-15 110.2 16.4 61 394-478 194-254 (256)
20 PLN02298 hydrolase, alpha/beta 99.2 7.9E-10 1.7E-14 112.6 18.4 137 93-262 34-171 (330)
21 TIGR02427 protocat_pcaD 3-oxoa 99.2 1.8E-09 3.9E-14 102.5 17.9 61 394-478 191-251 (251)
22 PF12697 Abhydrolase_6: Alpha/ 99.1 2.4E-10 5.2E-15 106.5 10.3 104 123-263 1-104 (228)
23 PLN02679 hydrolase, alpha/beta 99.1 3E-09 6.5E-14 110.2 19.4 66 395-480 291-357 (360)
24 PRK03592 haloalkane dehalogena 99.1 2.1E-09 4.5E-14 107.5 16.4 115 103-262 16-130 (295)
25 TIGR01738 bioH putative pimelo 99.1 3.4E-09 7.3E-14 100.4 16.8 60 394-477 186-245 (245)
26 TIGR02240 PHA_depoly_arom poly 99.0 5.7E-09 1.2E-13 103.4 16.5 117 103-261 11-127 (276)
27 PLN02578 hydrolase 99.0 6.1E-09 1.3E-13 107.5 15.8 76 164-259 111-186 (354)
28 PLN02894 hydrolase, alpha/beta 99.0 3.1E-08 6.7E-13 104.3 20.5 120 104-260 92-211 (402)
29 PLN03084 alpha/beta hydrolase 99.0 7E-08 1.5E-12 100.9 22.6 132 89-261 102-233 (383)
30 PRK14875 acetoin dehydrogenase 99.0 1.7E-08 3.6E-13 103.9 16.9 103 118-259 129-231 (371)
31 PLN03087 BODYGUARD 1 domain co 99.0 5.8E-08 1.3E-12 104.0 21.3 133 90-259 175-308 (481)
32 TIGR03695 menH_SHCHC 2-succiny 99.0 5.2E-08 1.1E-12 92.0 18.8 105 120-260 1-105 (251)
33 TIGR01249 pro_imino_pep_1 prol 99.0 3.9E-08 8.4E-13 99.3 18.7 126 93-262 6-132 (306)
34 PLN02652 hydrolase; alpha/beta 98.9 3.1E-08 6.7E-13 104.0 17.8 128 101-261 118-246 (395)
35 PRK08775 homoserine O-acetyltr 98.9 3.4E-08 7.4E-13 101.5 17.2 62 396-480 277-339 (343)
36 PRK11126 2-succinyl-6-hydroxy- 98.9 2.2E-08 4.7E-13 96.5 14.6 100 120-259 2-101 (242)
37 KOG4409 Predicted hydrolase/ac 98.9 1.1E-07 2.3E-12 95.9 19.0 286 93-479 67-363 (365)
38 PRK10749 lysophospholipase L2; 98.9 6.1E-08 1.3E-12 99.1 17.9 127 102-261 39-167 (330)
39 PRK06489 hypothetical protein; 98.9 1.1E-07 2.3E-12 98.5 18.4 61 395-480 291-357 (360)
40 COG1506 DAP2 Dipeptidyl aminop 98.8 3.8E-08 8.3E-13 109.1 14.9 136 96-262 368-509 (620)
41 TIGR01607 PST-A Plasmodium sub 98.8 1.8E-07 3.8E-12 96.0 18.7 153 102-261 6-186 (332)
42 KOG4178 Soluble epoxide hydrol 98.8 1.6E-07 3.6E-12 94.0 17.1 136 89-264 20-157 (322)
43 PRK07581 hypothetical protein; 98.8 7.2E-07 1.6E-11 91.3 21.6 63 392-478 271-334 (339)
44 PRK00175 metX homoserine O-ace 98.8 2.4E-07 5.2E-12 96.7 18.3 67 394-480 307-374 (379)
45 PLN02965 Probable pheophorbida 98.8 1.1E-07 2.3E-12 93.3 14.2 60 395-478 192-251 (255)
46 PRK05077 frsA fermentation/res 98.7 1.4E-06 2.9E-11 92.2 19.0 123 103-261 178-301 (414)
47 PLN02980 2-oxoglutarate decarb 98.6 4.8E-07 1E-11 110.1 17.1 108 117-259 1368-1479(1655)
48 KOG1454 Predicted hydrolase/ac 98.6 8.2E-07 1.8E-11 90.9 15.8 61 396-480 264-324 (326)
49 TIGR01392 homoserO_Ac_trn homo 98.5 6.8E-06 1.5E-10 84.7 20.1 65 394-478 286-351 (351)
50 PF00561 Abhydrolase_1: alpha/ 98.5 1.9E-07 4.1E-12 88.2 6.5 79 166-260 1-79 (230)
51 PLN02511 hydrolase 98.5 1.6E-06 3.6E-11 90.8 12.7 116 95-237 75-193 (388)
52 PLN02211 methyl indole-3-aceta 98.4 1.5E-05 3.3E-10 79.4 18.3 59 396-479 211-269 (273)
53 PRK10566 esterase; Provisional 98.4 1.9E-05 4.2E-10 76.6 17.8 62 396-479 186-247 (249)
54 PRK05855 short chain dehydroge 98.3 1.6E-05 3.5E-10 86.6 16.8 102 102-235 11-112 (582)
55 TIGR03100 hydr1_PEP hydrolase, 98.3 4.3E-05 9.4E-10 76.1 18.0 80 165-262 57-136 (274)
56 COG0596 MhpC Predicted hydrola 98.3 6.6E-05 1.4E-09 70.1 18.3 104 120-261 21-124 (282)
57 PF00326 Peptidase_S9: Prolyl 98.3 8.9E-06 1.9E-10 77.5 12.2 93 163-265 12-104 (213)
58 COG2267 PldB Lysophospholipase 98.3 3E-05 6.5E-10 78.5 16.2 138 90-264 8-146 (298)
59 PLN02442 S-formylglutathione h 98.2 7.9E-05 1.7E-09 74.7 17.8 54 202-263 127-181 (283)
60 PRK06765 homoserine O-acetyltr 98.2 7.3E-05 1.6E-09 78.4 16.8 71 390-480 317-388 (389)
61 PRK10985 putative hydrolase; P 98.1 0.00014 2.9E-09 74.3 17.8 109 103-236 41-150 (324)
62 KOG1455 Lysophospholipase [Lip 98.0 0.00021 4.6E-09 71.1 16.1 129 102-260 36-164 (313)
63 PLN02872 triacylglycerol lipas 97.9 0.00025 5.5E-09 74.5 15.3 61 396-479 325-388 (395)
64 PRK10115 protease 2; Provision 97.9 0.00038 8.2E-09 78.3 16.4 140 96-264 419-563 (686)
65 PF10340 DUF2424: Protein of u 97.8 4E-05 8.7E-10 79.1 7.7 132 106-264 106-239 (374)
66 PRK11460 putative hydrolase; P 97.8 0.00078 1.7E-08 65.5 15.2 62 396-477 148-209 (232)
67 TIGR01840 esterase_phb esteras 97.5 0.00039 8.5E-09 66.4 9.0 116 117-259 10-129 (212)
68 TIGR03101 hydr2_PEP hydrolase, 97.4 0.00081 1.8E-08 67.0 9.3 126 103-264 9-138 (266)
69 TIGR02821 fghA_ester_D S-formy 97.4 0.0028 6.1E-08 63.1 13.1 53 201-262 122-175 (275)
70 PF02230 Abhydrolase_2: Phosph 97.3 0.00093 2E-08 64.0 8.9 59 396-478 155-213 (216)
71 PRK11071 esterase YqiA; Provis 97.3 0.002 4.3E-08 60.8 10.5 54 396-478 136-189 (190)
72 PRK05371 x-prolyl-dipeptidyl a 97.3 0.0047 1E-07 70.3 15.2 100 158-279 272-385 (767)
73 PF12695 Abhydrolase_5: Alpha/ 97.3 0.0025 5.5E-08 55.9 10.3 42 396-460 104-145 (145)
74 PRK13604 luxD acyl transferase 97.3 0.014 3.1E-07 59.1 16.7 125 102-262 18-143 (307)
75 KOG2564 Predicted acetyltransf 97.2 0.0014 3.1E-08 64.5 8.7 108 117-256 71-178 (343)
76 KOG2382 Predicted alpha/beta h 97.2 0.017 3.6E-07 58.4 16.2 60 396-479 253-312 (315)
77 TIGR01838 PHA_synth_I poly(R)- 97.2 0.02 4.4E-07 62.4 17.9 85 165-263 220-305 (532)
78 TIGR01836 PHA_synth_III_C poly 97.0 0.031 6.7E-07 57.6 16.9 62 395-479 285-349 (350)
79 PF03583 LIP: Secretory lipase 97.0 0.032 7E-07 56.2 16.2 69 396-484 219-289 (290)
80 KOG2100 Dipeptidyl aminopeptid 96.9 0.01 2.2E-07 67.5 12.9 144 92-262 499-646 (755)
81 cd00707 Pancreat_lipase_like P 96.9 0.00086 1.9E-08 67.1 3.8 113 118-259 34-146 (275)
82 COG3509 LpqC Poly(3-hydroxybut 96.8 0.011 2.4E-07 58.9 10.8 126 102-260 43-179 (312)
83 COG0400 Predicted esterase [Ge 96.5 0.036 7.8E-07 53.1 11.9 116 106-238 5-120 (207)
84 TIGR03230 lipo_lipase lipoprot 96.5 0.0088 1.9E-07 63.6 8.3 81 165-259 73-153 (442)
85 PF03096 Ndr: Ndr family; Int 96.3 0.021 4.6E-07 57.0 9.4 245 119-481 22-280 (283)
86 TIGR00976 /NonD putative hydro 96.3 0.021 4.5E-07 62.8 10.3 130 102-263 5-135 (550)
87 PLN00021 chlorophyllase 96.3 0.009 2E-07 60.9 6.8 116 117-262 49-168 (313)
88 PF08386 Abhydrolase_4: TAP-li 96.2 0.016 3.4E-07 49.2 6.8 65 396-484 34-98 (103)
89 KOG1515 Arylacetamide deacetyl 96.2 0.056 1.2E-06 55.6 12.1 145 93-264 63-211 (336)
90 PF05448 AXE1: Acetyl xylan es 95.9 0.11 2.3E-06 53.3 12.5 129 102-262 65-211 (320)
91 PRK10162 acetyl esterase; Prov 95.7 0.03 6.4E-07 57.1 7.7 62 198-262 136-197 (318)
92 PF10503 Esterase_phd: Esteras 95.5 0.049 1.1E-06 52.7 8.0 53 200-260 80-132 (220)
93 COG3208 GrsT Predicted thioest 95.4 0.67 1.5E-05 45.3 15.2 59 396-478 176-234 (244)
94 KOG1552 Predicted alpha/beta h 94.8 0.21 4.6E-06 49.1 9.8 61 396-480 192-252 (258)
95 PF10230 DUF2305: Uncharacteri 94.8 0.17 3.7E-06 50.4 9.5 120 120-263 2-125 (266)
96 COG1647 Esterase/lipase [Gener 94.6 0.83 1.8E-05 44.1 13.0 61 396-478 181-242 (243)
97 PF07519 Tannase: Tannase and 94.6 2.6 5.7E-05 45.6 18.5 87 385-484 342-431 (474)
98 PF02129 Peptidase_S15: X-Pro 94.2 0.066 1.4E-06 53.1 5.1 85 164-264 56-140 (272)
99 KOG4391 Predicted alpha/beta h 94.1 0.14 2.9E-06 49.2 6.6 122 104-262 65-186 (300)
100 COG4099 Predicted peptidase [G 94.0 0.87 1.9E-05 45.8 12.2 52 202-261 254-305 (387)
101 PF00975 Thioesterase: Thioest 93.8 0.14 3.1E-06 48.7 6.4 77 165-259 27-103 (229)
102 PRK07868 acyl-CoA synthetase; 93.8 3.5 7.6E-05 48.8 19.0 59 396-478 297-359 (994)
103 PF06500 DUF1100: Alpha/beta h 93.5 0.052 1.1E-06 57.0 2.9 83 164-263 217-299 (411)
104 KOG1838 Alpha/beta hydrolase [ 92.7 0.57 1.2E-05 49.2 9.1 132 94-260 96-236 (409)
105 cd00312 Esterase_lipase Estera 92.1 0.6 1.3E-05 50.3 8.9 39 197-236 157-195 (493)
106 COG0657 Aes Esterase/lipase [L 91.7 1 2.2E-05 45.5 9.5 47 214-264 149-195 (312)
107 KOG2931 Differentiation-relate 91.7 8.7 0.00019 38.7 15.4 124 119-275 45-168 (326)
108 PF07859 Abhydrolase_3: alpha/ 91.5 0.29 6.4E-06 45.9 5.0 64 194-262 46-112 (211)
109 PLN02454 triacylglycerol lipas 91.4 0.48 1E-05 49.9 6.8 68 194-262 206-273 (414)
110 PF01764 Lipase_3: Lipase (cla 89.8 0.68 1.5E-05 40.5 5.5 61 196-260 46-106 (140)
111 PF05990 DUF900: Alpha/beta hy 89.8 0.43 9.3E-06 46.5 4.5 72 192-263 67-140 (233)
112 KOG4667 Predicted esterase [Li 87.7 4.3 9.4E-05 39.2 9.4 180 168-466 65-245 (269)
113 KOG3975 Uncharacterized conser 86.9 2.7 5.9E-05 41.3 7.7 36 386-421 231-267 (301)
114 KOG2183 Prolylcarboxypeptidase 86.0 1.4 3E-05 46.2 5.5 69 165-237 111-187 (492)
115 KOG2984 Predicted hydrolase [G 85.9 2.6 5.6E-05 40.3 6.9 61 396-480 216-276 (277)
116 cd00741 Lipase Lipase. Lipase 85.3 1.4 3E-05 39.5 4.8 43 196-241 10-52 (153)
117 PF05577 Peptidase_S28: Serine 84.9 2.5 5.3E-05 45.0 7.2 99 165-272 59-160 (434)
118 cd00519 Lipase_3 Lipase (class 84.4 2.1 4.5E-05 41.2 5.8 58 198-261 112-169 (229)
119 PLN02571 triacylglycerol lipas 84.4 2.6 5.7E-05 44.5 6.9 67 195-262 205-277 (413)
120 COG0429 Predicted hydrolase of 84.0 20 0.00043 36.9 12.6 123 104-259 61-185 (345)
121 KOG2281 Dipeptidyl aminopeptid 82.9 5.4 0.00012 44.1 8.6 133 104-269 623-771 (867)
122 COG0627 Predicted esterase [Ge 82.9 4.6 9.9E-05 41.3 7.8 130 118-263 51-190 (316)
123 TIGR03502 lipase_Pla1_cef extr 82.8 4.5 9.8E-05 46.3 8.4 99 119-237 448-575 (792)
124 PF11288 DUF3089: Protein of u 82.7 1.7 3.8E-05 41.6 4.4 63 196-261 76-138 (207)
125 PLN02733 phosphatidylcholine-s 82.4 3 6.6E-05 44.6 6.6 41 194-237 142-182 (440)
126 PRK10252 entF enterobactin syn 82.3 7.2 0.00016 47.2 10.5 102 120-258 1068-1169(1296)
127 PF05728 UPF0227: Uncharacteri 82.0 1.4 3E-05 41.5 3.5 51 201-265 46-96 (187)
128 PRK10439 enterobactin/ferric e 81.8 12 0.00027 39.6 10.9 54 198-259 267-322 (411)
129 PRK04940 hypothetical protein; 80.2 2.2 4.7E-05 40.0 4.0 38 217-265 60-97 (180)
130 PF05677 DUF818: Chlamydia CHL 79.8 4 8.8E-05 41.9 6.0 61 164-233 170-231 (365)
131 PLN02753 triacylglycerol lipas 79.6 4.6 9.9E-05 43.9 6.7 71 192-262 285-361 (531)
132 PLN02719 triacylglycerol lipas 78.2 4.8 0.0001 43.6 6.3 69 194-262 273-347 (518)
133 PF12146 Hydrolase_4: Putative 77.9 9.9 0.00022 30.4 6.7 79 103-205 1-79 (79)
134 PF00151 Lipase: Lipase; Inte 77.7 0.44 9.6E-06 49.0 -1.5 105 117-240 68-173 (331)
135 PF11144 DUF2920: Protein of u 76.6 4.4 9.5E-05 42.6 5.4 60 195-262 161-221 (403)
136 KOG4627 Kynurenine formamidase 75.7 1.8 3.8E-05 41.4 2.0 72 175-260 101-172 (270)
137 PF07819 PGAP1: PGAP1-like pro 74.5 19 0.00041 34.8 9.0 37 195-231 61-99 (225)
138 PF06342 DUF1057: Alpha/beta h 74.3 33 0.00072 34.5 10.6 90 386-477 202-296 (297)
139 PLN02761 lipase class 3 family 72.4 9.3 0.0002 41.5 6.7 69 194-262 268-344 (527)
140 smart00824 PKS_TE Thioesterase 70.8 16 0.00034 33.2 7.2 77 164-258 24-100 (212)
141 PF11187 DUF2974: Protein of u 70.5 7.8 0.00017 37.6 5.2 39 198-240 69-107 (224)
142 KOG3101 Esterase D [General fu 70.1 29 0.00063 33.5 8.6 156 89-264 7-180 (283)
143 PLN02408 phospholipase A1 69.1 12 0.00026 39.0 6.5 64 195-261 179-242 (365)
144 TIGR01839 PHA_synth_II poly(R) 67.7 1.2E+02 0.0025 33.7 13.9 41 370-423 428-468 (560)
145 PF00756 Esterase: Putative es 65.4 13 0.00028 35.8 5.6 56 199-263 97-153 (251)
146 PLN02934 triacylglycerol lipas 64.4 14 0.0003 40.1 6.0 40 199-241 306-345 (515)
147 PLN02802 triacylglycerol lipas 64.3 14 0.0003 40.1 5.9 64 195-261 309-372 (509)
148 COG1073 Hydrolases of the alph 63.9 15 0.00033 35.4 5.9 62 397-480 233-297 (299)
149 PLN02324 triacylglycerol lipas 63.3 17 0.00036 38.5 6.3 68 194-262 193-267 (415)
150 PF06821 Ser_hydrolase: Serine 62.6 11 0.00024 34.8 4.4 42 397-463 115-156 (171)
151 PF05057 DUF676: Putative seri 62.5 11 0.00023 36.2 4.4 49 192-241 54-102 (217)
152 COG2945 Predicted hydrolase of 62.5 7 0.00015 37.1 2.9 60 174-241 68-127 (210)
153 PF10081 Abhydrolase_9: Alpha/ 62.0 15 0.00031 37.0 5.2 37 194-230 86-122 (289)
154 PF08840 BAAT_C: BAAT / Acyl-C 61.4 10 0.00022 36.3 4.0 47 204-259 9-55 (213)
155 PLN00413 triacylglycerol lipas 61.4 9.3 0.0002 41.1 4.0 39 199-240 269-307 (479)
156 TIGR01849 PHB_depoly_PhaZ poly 61.4 2.3E+02 0.0049 30.2 14.8 57 202-265 157-213 (406)
157 PLN02310 triacylglycerol lipas 61.3 17 0.00037 38.4 5.9 64 195-261 186-250 (405)
158 KOG4569 Predicted lipase [Lipi 61.1 16 0.00034 37.7 5.5 59 198-260 155-213 (336)
159 KOG2551 Phospholipase/carboxyh 59.6 23 0.00051 34.3 6.0 58 396-478 163-222 (230)
160 PLN03082 Iron-sulfur cluster a 59.4 6.8 0.00015 36.1 2.3 66 118-184 76-148 (163)
161 PF06057 VirJ: Bacterial virul 59.3 14 0.0003 35.0 4.4 60 192-258 46-105 (192)
162 PLN02847 triacylglycerol lipas 59.2 16 0.00035 40.3 5.4 64 188-257 221-288 (633)
163 PF03283 PAE: Pectinacetyleste 59.0 84 0.0018 32.8 10.5 151 103-262 34-199 (361)
164 PLN02162 triacylglycerol lipas 57.4 13 0.00028 39.9 4.3 40 199-241 263-302 (475)
165 TIGR01911 HesB_rel_seleno HesB 56.9 11 0.00023 31.3 2.9 58 122-180 28-90 (92)
166 KOG1553 Predicted alpha/beta h 56.2 41 0.0009 34.8 7.3 100 118-255 241-340 (517)
167 PF03959 FSH1: Serine hydrolas 56.1 11 0.00025 35.8 3.3 49 396-468 161-209 (212)
168 PF08840 BAAT_C: BAAT / Acyl-C 55.9 8.1 0.00018 37.0 2.3 47 396-461 115-163 (213)
169 PLN03037 lipase class 3 family 55.8 23 0.00051 38.5 5.9 63 196-260 296-359 (525)
170 PF12740 Chlorophyllase2: Chlo 54.1 85 0.0018 31.2 9.1 40 218-260 92-131 (259)
171 COG4757 Predicted alpha/beta h 52.9 28 0.0006 34.2 5.3 68 164-236 56-124 (281)
172 PF07389 DUF1500: Protein of u 52.4 11 0.00024 30.8 2.1 28 198-227 7-34 (100)
173 PF01738 DLH: Dienelactone hyd 51.5 33 0.00071 32.3 5.7 46 395-460 144-189 (218)
174 KOG3079 Uridylate kinase/adeny 51.4 8.6 0.00019 36.2 1.5 15 118-132 5-19 (195)
175 COG4425 Predicted membrane pro 51.0 30 0.00064 37.0 5.5 36 194-229 374-409 (588)
176 PRK11190 Fe/S biogenesis prote 51.0 20 0.00043 34.0 4.0 64 121-185 24-95 (192)
177 TIGR03712 acc_sec_asp2 accesso 50.9 94 0.002 33.7 9.3 114 105-262 277-392 (511)
178 PRK14567 triosephosphate isome 49.8 37 0.0008 33.6 5.8 61 194-263 178-238 (253)
179 PRK14566 triosephosphate isome 49.3 41 0.00089 33.4 6.1 61 194-263 188-248 (260)
180 PF08237 PE-PPE: PE-PPE domain 49.1 54 0.0012 31.8 6.8 62 192-259 28-89 (225)
181 PF00681 Plectin: Plectin repe 47.5 19 0.00042 25.5 2.6 33 257-289 11-43 (45)
182 PF10142 PhoPQ_related: PhoPQ- 45.6 71 0.0015 33.4 7.4 93 349-484 235-328 (367)
183 PF01083 Cutinase: Cutinase; 45.3 41 0.00088 31.3 5.1 83 167-262 41-125 (179)
184 COG4782 Uncharacterized protei 44.3 32 0.00069 35.8 4.5 117 117-262 113-236 (377)
185 PRK09502 iscA iron-sulfur clus 40.8 31 0.00067 29.2 3.3 65 120-185 24-94 (107)
186 PF06259 Abhydrolase_8: Alpha/ 39.1 67 0.0015 30.0 5.5 65 164-237 62-129 (177)
187 KOG3043 Predicted hydrolase re 37.5 68 0.0015 31.3 5.3 77 391-478 159-238 (242)
188 COG2936 Predicted acyl esteras 37.4 33 0.00071 37.9 3.6 132 102-265 28-164 (563)
189 PF06028 DUF915: Alpha/beta hy 36.9 1.1E+02 0.0025 30.2 7.0 65 395-480 183-255 (255)
190 TIGR03341 YhgI_GntY IscR-regul 36.8 47 0.001 31.4 4.1 64 121-185 23-94 (190)
191 PF05576 Peptidase_S37: PS-10 36.7 1.3E+02 0.0029 32.0 7.7 90 117-232 60-149 (448)
192 PF01738 DLH: Dienelactone hyd 35.7 25 0.00054 33.1 2.2 53 196-258 78-130 (218)
193 PF02450 LCAT: Lecithin:choles 34.9 35 0.00077 35.8 3.3 40 199-238 101-140 (389)
194 KOG3724 Negative regulator of 34.5 48 0.001 37.9 4.2 95 123-233 92-198 (973)
195 KOG2565 Predicted hydrolases o 34.4 2.1E+02 0.0046 30.2 8.5 136 102-266 132-270 (469)
196 PLN02429 triosephosphate isome 33.6 83 0.0018 32.2 5.5 61 194-263 238-299 (315)
197 TIGR01840 esterase_phb esteras 32.6 33 0.00071 32.3 2.4 27 397-423 169-195 (212)
198 PF15253 STIL_N: SCL-interrupt 31.9 49 0.0011 35.0 3.7 37 89-128 198-235 (410)
199 KOG1516 Carboxylesterase and r 31.6 3E+02 0.0065 29.9 10.1 34 201-235 180-213 (545)
200 PF08538 DUF1749: Protein of u 31.3 77 0.0017 32.3 4.8 70 192-265 82-153 (303)
201 PRK09504 sufA iron-sulfur clus 31.3 47 0.001 29.0 2.9 64 120-184 39-108 (122)
202 PF15128 T_cell_tran_alt: T-ce 31.2 36 0.00077 27.7 1.9 25 1-25 23-47 (92)
203 PF10503 Esterase_phd: Esteras 31.1 42 0.00091 32.5 2.9 27 396-422 169-195 (220)
204 KOG3253 Predicted alpha/beta h 30.4 77 0.0017 35.3 4.9 49 391-462 299-347 (784)
205 PF10605 3HBOH: 3HB-oligomer h 30.3 86 0.0019 34.9 5.2 73 396-484 555-642 (690)
206 COG2945 Predicted hydrolase of 29.6 43 0.00093 31.9 2.5 56 396-477 149-204 (210)
207 COG3150 Predicted esterase [Ge 28.8 46 0.001 31.0 2.5 58 192-267 41-98 (191)
208 TIGR02821 fghA_ester_D S-formy 28.1 70 0.0015 31.5 4.0 50 396-465 211-261 (275)
209 TIGR02011 IscA iron-sulfur clu 27.3 60 0.0013 27.3 2.9 65 119-184 21-91 (105)
210 KOG2182 Hydrolytic enzymes of 27.2 94 0.002 33.7 4.8 73 166-241 119-196 (514)
211 PF06309 Torsin: Torsin; Inte 27.0 50 0.0011 29.2 2.4 17 117-133 49-65 (127)
212 COG3896 Chloramphenicol 3-O-ph 26.6 45 0.00097 30.9 2.0 28 119-147 21-52 (205)
213 PF03403 PAF-AH_p_II: Platelet 26.1 46 0.001 34.9 2.3 38 218-264 229-266 (379)
214 COG0412 Dienelactone hydrolase 26.0 93 0.002 30.2 4.3 44 194-238 90-133 (236)
215 KOG2541 Palmitoyl protein thio 25.4 2.1E+02 0.0046 28.7 6.6 95 116-241 20-116 (296)
216 COG0529 CysC Adenylylsulfate k 24.9 62 0.0013 30.5 2.6 23 118-141 20-44 (197)
217 COG0218 Predicted GTPase [Gene 23.7 1.1E+02 0.0024 29.2 4.2 59 119-183 23-84 (200)
218 PF06821 Ser_hydrolase: Serine 23.3 93 0.002 28.7 3.6 39 216-261 54-92 (171)
219 PF09292 Neil1-DNA_bind: Endon 23.3 48 0.001 22.7 1.1 10 122-131 26-35 (39)
220 PLN02517 phosphatidylcholine-s 22.9 60 0.0013 36.2 2.5 40 198-237 193-233 (642)
221 PF05277 DUF726: Protein of un 22.0 2.4E+02 0.0052 29.3 6.6 63 196-261 200-262 (345)
222 COG3319 Thioesterase domains o 21.9 2.3E+02 0.005 28.1 6.2 44 192-241 46-89 (257)
223 PF01555 N6_N4_Mtase: DNA meth 21.9 1E+02 0.0023 28.6 3.8 59 167-229 2-63 (231)
224 PRK06762 hypothetical protein; 21.6 54 0.0012 29.4 1.7 13 121-133 2-14 (166)
225 COG3545 Predicted esterase of 21.2 97 0.0021 29.0 3.1 36 216-259 58-93 (181)
226 KOG2369 Lecithin:cholesterol a 20.8 89 0.0019 33.6 3.2 74 396-480 373-452 (473)
227 PF07849 DUF1641: Protein of u 20.6 42 0.00092 23.5 0.5 19 347-365 13-31 (42)
228 cd00311 TIM Triosephosphate is 20.3 2.6E+02 0.0056 27.4 6.2 58 195-262 176-234 (242)
229 PRK00042 tpiA triosephosphate 20.2 2.8E+02 0.0061 27.3 6.5 60 194-263 179-239 (250)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-121 Score=949.18 Aligned_cols=413 Identities=51% Similarity=0.919 Sum_probs=382.0
Q ss_pred CCccCCccccCCCCCCCCCceeEeeeEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEc
Q 011469 70 GMMEADKIKTLPGQPEGVDFDQYAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVN 149 (485)
Q Consensus 70 ~~~~~~~v~~lPg~~~~~~~~~ysGyv~v~~~~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~ 149 (485)
+.+++|+|+.|||+|.+++|+||||||+|+++.+++||||||||+++|+++||||||||||||||++ |+|.|+|||+|+
T Consensus 23 ~~~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~ 101 (454)
T KOG1282|consen 23 HVDEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVK 101 (454)
T ss_pred ccchhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEc
Confidence 3567799999999998899999999999999899999999999999999999999999999999997 999999999999
Q ss_pred CCCCccccCccCcccccceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccc
Q 011469 150 SDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGH 229 (485)
Q Consensus 150 ~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~ 229 (485)
.||++|+.|+|||||.||||||||||||||||+++++++. .+|+.+|+|+++||++||++||||++|+|||+|||||||
T Consensus 102 ~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~-~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~ 180 (454)
T KOG1282|consen 102 YNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYK-TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGH 180 (454)
T ss_pred CCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCc-CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccce
Confidence 9999999999999999999999999999999999998887 499999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHcC-C-CCceeeeeeeEecccccccccccchhhHHHhhccCCCHHHHHHHHhhccccC------CCCchh
Q 011469 230 YVPQLAYTILSKN-T-SKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFAT------GQLSTS 301 (485)
Q Consensus 230 YvP~lA~~I~~~n-~-~~~~inLkGi~iGNg~id~~~~~~~~~~~~~~~gli~~~~~~~i~~~C~~~~------~~~~~~ 301 (485)
|||+||++|++.| . ..+.|||||++||||++|+..|..++.+|+|.||+|++++++.+++.|.+.. ...+..
T Consensus 181 YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~ 260 (454)
T KOG1282|consen 181 YVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTK 260 (454)
T ss_pred ehHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhH
Confidence 9999999999999 3 5678999999999999999999999999999999999999999999998742 133678
Q ss_pred HHHHHHHHH-HhhCCCcccccccccCCCCCCCCCCCCCcccCCCCChhHHHHHhChHHHHHHhcCCCCC---ccccCccc
Q 011469 302 CDQYQTQGV-REYGQIDLYNVYAPLCKSSAPPPPTAGVIREYDPCSDKYVNSYLNLAEVQAALHAKHTN---WSTCSDLT 377 (485)
Q Consensus 302 C~~~~~~~~-~~~g~i~~Yni~~~~C~~~~~~~~~~~~~~~~dpc~~~~~~~ylN~~~Vq~AL~v~~~~---w~~cs~~v 377 (485)
|.++++.+. +..++++.|+|+.+.|...............+++|...+.+.|||+++||+||||+.+. |+.||+.+
T Consensus 261 C~~~~~~~~~~~~~~i~~y~i~~~~C~~~~~~~~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~~W~~Cn~~v 340 (454)
T KOG1282|consen 261 CNKAVEEFDSKTTGDIDNYYILTPDCYPTSYELKKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIGKWERCNDEV 340 (454)
T ss_pred HHHHHHHHHHHHhccCchhhhcchhhccccccccccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCCcccccChhh
Confidence 999999888 66689999999999998621100001124567999988889999999999999998764 99999998
Q ss_pred ---ccCCCCCchHHHHHHhhcC-cEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccC-CccceEEEeecceEEE
Q 011469 378 ---WTDSPSTVLPTIQQLIASG-IRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYAD-GEVGGYVLGYKGVIFT 452 (485)
Q Consensus 378 ---~~d~~~s~~~~l~~Ll~~g-irVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~-~~v~Gy~~~y~~Ltf~ 452 (485)
|.+...+|+|.+..++.++ +|||||+||.|++||++||++|+++|++..+.+|+||+++ +|||||+++|+||+|+
T Consensus 341 ~~~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~ 420 (454)
T KOG1282|consen 341 NYNYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFA 420 (454)
T ss_pred hcccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEE
Confidence 6799999999999999965 9999999999999999999999999999999999999996 8999999999999999
Q ss_pred EEcCCCccCCccChHHHHHHHHHHHcCCCCCC
Q 011469 453 TVRGAGHLVPTYQPQRALIMISSFLEGKLPPS 484 (485)
Q Consensus 453 ~V~gAGHmVP~dqP~~al~l~~~fl~g~~~p~ 484 (485)
||+|||||||.|||++|+.||++||.|+++|.
T Consensus 421 tVrGaGH~VP~~~p~~al~m~~~fl~g~~l~~ 452 (454)
T KOG1282|consen 421 TVRGAGHMVPYDKPESALIMFQRFLNGQPLPS 452 (454)
T ss_pred EEeCCcccCCCCCcHHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999985
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=2.8e-102 Score=815.67 Aligned_cols=400 Identities=28% Similarity=0.552 Sum_probs=349.7
Q ss_pred ccCCccccCCCCCCCCCceeEeeeEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCC
Q 011469 72 MEADKIKTLPGQPEGVDFDQYAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSD 151 (485)
Q Consensus 72 ~~~~~v~~lPg~~~~~~~~~ysGyv~v~~~~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~ 151 (485)
++.|+|+.|||++.++++++||||++|+++.+++||||||||+++++++||+|||||||||||+ +|+|.|+|||+++.+
T Consensus 20 ~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~-~g~f~e~GP~~~~~~ 98 (437)
T PLN02209 20 RSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCL-SGLFFENGPLALKNK 98 (437)
T ss_pred CccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHh-hhHHHhcCCceeccC
Confidence 3568999999998789999999999999877899999999999999999999999999999999 699999999999877
Q ss_pred C-----CccccCccCcccccceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccc
Q 011469 152 G-----KTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESY 226 (485)
Q Consensus 152 ~-----~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESY 226 (485)
+ .++.+|+||||+.|||||||||+||||||+++...+. +++++|+|+++||++||++||+|++++|||+||||
T Consensus 99 ~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESY 176 (437)
T PLN02209 99 VYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERT--SDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSY 176 (437)
T ss_pred CCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCc
Confidence 4 3789999999999999999999999999988765543 66788999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHcC--CCCceeeeeeeEecccccccccccchhhHHHhhccCCCHHHHHHHHhhcccc---CCCCchh
Q 011469 227 AGHYVPQLAYTILSKN--TSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFA---TGQLSTS 301 (485)
Q Consensus 227 gG~YvP~lA~~I~~~n--~~~~~inLkGi~iGNg~id~~~~~~~~~~~~~~~gli~~~~~~~i~~~C~~~---~~~~~~~ 301 (485)
||||||.+|++|+++| ..++.||||||+||||++||..+..++.+|++.+|+|++++++.+++.|... ....+..
T Consensus 177 aG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~~~ 256 (437)
T PLN02209 177 SGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSNKK 256 (437)
T ss_pred CceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccCCCChHH
Confidence 9999999999999987 2456899999999999999999999999999999999999999999999641 1134567
Q ss_pred HHHHHHHHHHhhCCCcccccccccCCCCCCCCCCCCCcccCCCCCh---hHHHHHhChHHHHHHhcCCCC---CccccCc
Q 011469 302 CDQYQTQGVREYGQIDLYNVYAPLCKSSAPPPPTAGVIREYDPCSD---KYVNSYLNLAEVQAALHAKHT---NWSTCSD 375 (485)
Q Consensus 302 C~~~~~~~~~~~g~i~~Yni~~~~C~~~~~~~~~~~~~~~~dpc~~---~~~~~ylN~~~Vq~AL~v~~~---~w~~cs~ 375 (485)
|..++..+....+.++.|++..+.|..... .....+|.. ..+..|||+++||+||||+.. .|..|+.
T Consensus 257 C~~~i~~~~~~~~~~~~~~~~~~~c~~~~~-------~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~~~~ 329 (437)
T PLN02209 257 CLKLVEEYHKCTDNINSHHTLIANCDDSNT-------QHISPDCYYYPYHLVECWANNESVREALHVDKGSIGEWIRDHR 329 (437)
T ss_pred HHHHHHHHHHHhhcCCcccccccccccccc-------ccCCCCcccccHHHHHHHhCCHHHHHHhCCCCCCCCCCccccc
Confidence 998887766666788888876667854211 112245643 367899999999999999853 2999987
Q ss_pred cc-ccCCCCCchHHHHHHhhcCcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecc-eEEEE
Q 011469 376 LT-WTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKG-VIFTT 453 (485)
Q Consensus 376 ~v-~~d~~~s~~~~l~~Ll~~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~-Ltf~~ 453 (485)
.+ +.+...++++.+.+++.+|+|||||+||.|.+||+.|+++|+++|+|+++++|++|+++++++||+|+|+| |||++
T Consensus 330 ~~~~~~d~~~~~~~~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~ 409 (437)
T PLN02209 330 GIPYKSDIRSSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFAT 409 (437)
T ss_pred hhhcccchhhhHHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEE
Confidence 66 54333345555556666799999999999999999999999999999999999999999999999999996 99999
Q ss_pred EcCCCccCCccChHHHHHHHHHHHcCCCC
Q 011469 454 VRGAGHLVPTYQPQRALIMISSFLEGKLP 482 (485)
Q Consensus 454 V~gAGHmVP~dqP~~al~l~~~fl~g~~~ 482 (485)
|+||||||| +||++|++||++|+.|++|
T Consensus 410 V~~AGHmVp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 410 VKGGGHTAE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred EcCCCCCcC-cCHHHHHHHHHHHHcCCCC
Confidence 999999998 6999999999999999875
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=1.9e-101 Score=809.22 Aligned_cols=397 Identities=29% Similarity=0.601 Sum_probs=349.9
Q ss_pred cCCccccCCCCCCCCCceeEeeeEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCC-
Q 011469 73 EADKIKTLPGQPEGVDFDQYAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSD- 151 (485)
Q Consensus 73 ~~~~v~~lPg~~~~~~~~~ysGyv~v~~~~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~- 151 (485)
+.+.|++|||++.+++|++||||++|+++.+.+||||||||+++|+++||||||||||||||+ .|+|.|+|||+++.+
T Consensus 19 ~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~~ 97 (433)
T PLN03016 19 SASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCL-GGIIFENGPVGLKFEV 97 (433)
T ss_pred ccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHH-HHHHHhcCCceeeccc
Confidence 338899999997778999999999999877899999999999999999999999999999999 599999999998743
Q ss_pred ----CCccccCccCcccccceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccc
Q 011469 152 ----GKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYA 227 (485)
Q Consensus 152 ----~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYg 227 (485)
+.++.+|++||++.|||||||||+||||||+++..++. +|+++|+|+++||++||++||+|+++||||+|||||
T Consensus 98 ~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYa 175 (433)
T PLN03016 98 FNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYS 175 (433)
T ss_pred cCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCcc
Confidence 35789999999999999999999999999988765543 677788999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHcC--CCCceeeeeeeEecccccccccccchhhHHHhhccCCCHHHHHHHHhhccccC---CCCchhH
Q 011469 228 GHYVPQLAYTILSKN--TSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFAT---GQLSTSC 302 (485)
Q Consensus 228 G~YvP~lA~~I~~~n--~~~~~inLkGi~iGNg~id~~~~~~~~~~~~~~~gli~~~~~~~i~~~C~~~~---~~~~~~C 302 (485)
|||||++|++|+++| ...+.||||||+||||++||..+..++.+|++.||+|++++++.+++.|+... ...+..|
T Consensus 176 G~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~C 255 (433)
T PLN03016 176 GMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQC 255 (433)
T ss_pred ceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHHH
Confidence 999999999999988 24578999999999999999999999999999999999999999999997421 1346689
Q ss_pred HHHHHHHHHhhCCCcccccccccCCCCCCCCCCCCCcccCCCCCh---hHHHHHhChHHHHHHhcCCCC---CccccCcc
Q 011469 303 DQYQTQGVREYGQIDLYNVYAPLCKSSAPPPPTAGVIREYDPCSD---KYVNSYLNLAEVQAALHAKHT---NWSTCSDL 376 (485)
Q Consensus 303 ~~~~~~~~~~~g~i~~Yni~~~~C~~~~~~~~~~~~~~~~dpc~~---~~~~~ylN~~~Vq~AL~v~~~---~w~~cs~~ 376 (485)
..++..+....+.+|+|||+.+.|..... ..++|.. ..+..|||+++||+||||+.. .|..|+..
T Consensus 256 ~~~~~~~~~~~~~~n~yni~~~~~~~~~~---------~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~cn~~ 326 (433)
T PLN03016 256 LKLTEEYHKCTAKINIHHILTPDCDVTNV---------TSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRT 326 (433)
T ss_pred HHHHHHHHHHhcCCChhhccCCccccccc---------CCCcccccchHHHHHHhCCHHHHHHhCCCCCCCCCCccCCcc
Confidence 99888877778999999999876742111 1135653 367899999999999999752 29999998
Q ss_pred c-ccCCCCCchHHHHHHhhcCcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecc-eEEEEE
Q 011469 377 T-WTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKG-VIFTTV 454 (485)
Q Consensus 377 v-~~d~~~s~~~~l~~Ll~~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~-Ltf~~V 454 (485)
+ +.+...++++.+.+++.+|+|||||+||.|++||+.|+++|+++|+|+++++|++|+++++++||+++|++ |||++|
T Consensus 327 v~~~~d~~~~~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V 406 (433)
T PLN03016 327 IPYNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATI 406 (433)
T ss_pred cccccccchhhHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEE
Confidence 8 44333345666666677799999999999999999999999999999999999999999999999999985 999999
Q ss_pred cCCCccCCccChHHHHHHHHHHHcCCCC
Q 011469 455 RGAGHLVPTYQPQRALIMISSFLEGKLP 482 (485)
Q Consensus 455 ~gAGHmVP~dqP~~al~l~~~fl~g~~~ 482 (485)
+||||||| +||++|++||++||.|+++
T Consensus 407 ~~AGHmVp-~qP~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 407 KAGGHTAE-YRPNETFIMFQRWISGQPL 433 (433)
T ss_pred cCCCCCCC-CCHHHHHHHHHHHHcCCCC
Confidence 99999998 7999999999999999875
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=1.2e-100 Score=802.50 Aligned_cols=394 Identities=42% Similarity=0.788 Sum_probs=327.7
Q ss_pred CCCCCCCCceeEeeeEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCC-CccccCc
Q 011469 81 PGQPEGVDFDQYAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDG-KTLYRNE 159 (485)
Q Consensus 81 Pg~~~~~~~~~ysGyv~v~~~~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~-~~l~~N~ 159 (485)
||...++++++|||||+|+++.+++||||||||+++++++||||||||||||||| +|+|.|+|||++++++ .++..||
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccc
Confidence 7887778999999999999888899999999999999999999999999999999 6999999999999554 6899999
Q ss_pred cCcccccceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHH
Q 011469 160 YAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTIL 239 (485)
Q Consensus 160 ~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~ 239 (485)
+|||++|||||||||+||||||+++..++. .+++++|+|+++||++|+.+||+|+++||||+||||||||||.+|.+|+
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYV-WNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS--SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeecccccccc-chhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 999999999999999999999998877655 3889999999999999999999999999999999999999999999999
Q ss_pred HcC-C-CCceeeeeeeEecccccccccccchhhHHHhhccCCCHHHHHHHHhhcccc--CCCCchhHHHHHHHHHH----
Q 011469 240 SKN-T-SKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFA--TGQLSTSCDQYQTQGVR---- 311 (485)
Q Consensus 240 ~~n-~-~~~~inLkGi~iGNg~id~~~~~~~~~~~~~~~gli~~~~~~~i~~~C~~~--~~~~~~~C~~~~~~~~~---- 311 (485)
++| . ..+.||||||+||||++||..+..++.+|++.||+|++++++.+.+.|... .......|..+.+.+..
T Consensus 159 ~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 238 (415)
T PF00450_consen 159 QQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQYAI 238 (415)
T ss_dssp HHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHHCHH
T ss_pred hccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhhccc
Confidence 998 2 346899999999999999999999999999999999999999999999642 12456789888877665
Q ss_pred --hhCCCcccccccccCCCCCCCCCCCCCcccCCCCChhHHHHHhChHHHHHHhcCCC--C-CccccCccc-c----cCC
Q 011469 312 --EYGQIDLYNVYAPLCKSSAPPPPTAGVIREYDPCSDKYVNSYLNLAEVQAALHAKH--T-NWSTCSDLT-W----TDS 381 (485)
Q Consensus 312 --~~g~i~~Yni~~~~C~~~~~~~~~~~~~~~~dpc~~~~~~~ylN~~~Vq~AL~v~~--~-~w~~cs~~v-~----~d~ 381 (485)
..+++|+|||+.+.|...... .......+++....+..|||+++||+||||+. . .|..|++.| + .|.
T Consensus 239 ~~~~~~~n~Ydi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~~~w~~~~~~V~~~~~~~d~ 315 (415)
T PF00450_consen 239 SQCNGGINPYDIRQPCYNPSRSS---YDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDSNVNWQSCNDAVNFNWLYDDF 315 (415)
T ss_dssp HHHHTTSETTSTTSEETT-SHCT---TCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTTSSS--SB-HHHHHHCCTCCC
T ss_pred ccccCCcceeeeecccccccccc---ccccccccccchhhHHHHhccHHHHHhhCCCcccCCcccccCcccccccccccc
Confidence 348999999998644311000 00011223455678999999999999999972 2 299999977 2 377
Q ss_pred CCCchHHHHHHhhcCcEEEEEecCCccccCchhHHHHHHHcCCCCCcccccccc--CCccceEEEeecceEEEEEcCCCc
Q 011469 382 PSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYA--DGEVGGYVLGYKGVIFTTVRGAGH 459 (485)
Q Consensus 382 ~~s~~~~l~~Ll~~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~--~~~v~Gy~~~y~~Ltf~~V~gAGH 459 (485)
+.++.+.+++||++++|||||+||.|++||+.|+++|+++|+|+++++|++|.. +++++||+|+|++|||++|+||||
T Consensus 316 ~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGH 395 (415)
T PF00450_consen 316 MPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGH 395 (415)
T ss_dssp -SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--S
T ss_pred cccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcc
Confidence 789999999999999999999999999999999999999999999999999987 899999999999999999999999
Q ss_pred cCCccChHHHHHHHHHHHcC
Q 011469 460 LVPTYQPQRALIMISSFLEG 479 (485)
Q Consensus 460 mVP~dqP~~al~l~~~fl~g 479 (485)
|||+|||+++++||++||+|
T Consensus 396 mvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 396 MVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp SHHHHSHHHHHHHHHHHHCT
T ss_pred cChhhCHHHHHHHHHHHhcC
Confidence 99999999999999999987
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=3e-94 Score=762.82 Aligned_cols=381 Identities=31% Similarity=0.587 Sum_probs=333.9
Q ss_pred CCCCceeEeeeEEecC-CCCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcc
Q 011469 85 EGVDFDQYAGYLTVDP-KAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWN 163 (485)
Q Consensus 85 ~~~~~~~ysGyv~v~~-~~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn 163 (485)
++.++++|||||+|++ ..+++||||||||+++++++||||||||||||||+ +|+|+|+|||+|+.++.++.+|++|||
T Consensus 41 ~~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~n~~sW~ 119 (462)
T PTZ00472 41 CDPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYNNTYSWN 119 (462)
T ss_pred cCCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeECCcccc
Confidence 4566899999999975 45789999999999999999999999999999999 699999999999999878999999999
Q ss_pred cccceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcC-
Q 011469 164 NVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKN- 242 (485)
Q Consensus 164 ~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n- 242 (485)
+.|||||||||+||||||++.. ++. .+++++|+|+++||+.|+++||+|++++|||+||||||||+|.+|.+|+++|
T Consensus 120 ~~~~~l~iDqP~G~G~S~~~~~-~~~-~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~ 197 (462)
T PTZ00472 120 NEAYVIYVDQPAGVGFSYADKA-DYD-HNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNK 197 (462)
T ss_pred cccCeEEEeCCCCcCcccCCCC-CCC-CChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhcc
Confidence 9999999999999999998754 444 3778999999999999999999999999999999999999999999999998
Q ss_pred C-CCceeeeeeeEecccccccccccchhhHHHhh-------ccCCCHHHHHHHHh---hc-------cccCCCCchhHHH
Q 011469 243 T-SKTIINLKGIAIGNAWIDDNLCTKGMFDFFWT-------HALNSDETNAAINK---YC-------DFATGQLSTSCDQ 304 (485)
Q Consensus 243 ~-~~~~inLkGi~iGNg~id~~~~~~~~~~~~~~-------~gli~~~~~~~i~~---~C-------~~~~~~~~~~C~~ 304 (485)
. ...+||||||+|||||+||..|..++.+|+|. +++|++++++.+.+ .| ..........|..
T Consensus 198 ~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~c~~ 277 (462)
T PTZ00472 198 KGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSSCSV 277 (462)
T ss_pred ccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchHHHH
Confidence 3 34789999999999999999999999999996 48999999988864 24 3211123345655
Q ss_pred HHHHHHH-----hhCCCcccccccccCCCCCCCCCCCCCcccCCCCCh-hHHHHHhChHHHHHHhcCCCCCccccCccc-
Q 011469 305 YQTQGVR-----EYGQIDLYNVYAPLCKSSAPPPPTAGVIREYDPCSD-KYVNSYLNLAEVQAALHAKHTNWSTCSDLT- 377 (485)
Q Consensus 305 ~~~~~~~-----~~g~i~~Yni~~~~C~~~~~~~~~~~~~~~~dpc~~-~~~~~ylN~~~Vq~AL~v~~~~w~~cs~~v- 377 (485)
+...|.. ..+++|+|||+.+ |.. ++|.. ..+..|||+++||+||||+...|+.|+..|
T Consensus 278 a~~~c~~~~~~~~~~g~n~Ydi~~~-c~~--------------~~c~~~~~~~~yLN~~~Vq~AL~v~~~~w~~c~~~V~ 342 (462)
T PTZ00472 278 ARALCNEYIAVYSATGLNNYDIRKP-CIG--------------PLCYNMDNTIAFMNREDVQSSLGVKPATWQSCNMEVN 342 (462)
T ss_pred HHHHHHHHHHHHHhcCCChhheecc-CCC--------------CCccCHHHHHHHhCCHHHHHHhCCCCCCceeCCHHHH
Confidence 5443322 1367999999974 632 45754 578999999999999999854599999988
Q ss_pred --c-cCCCCCchHHHHHHhhcCcEEEEEecCCccccCchhHHHHHHHcCCCCCc-----ccccc-ccCCccceEEEeec-
Q 011469 378 --W-TDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVET-----AWYPW-YADGEVGGYVLGYK- 447 (485)
Q Consensus 378 --~-~d~~~s~~~~l~~Ll~~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~-----~~~~w-~~~~~v~Gy~~~y~- 447 (485)
+ .|.+.++.+.+++||++|+|||||+||.|++||+.|+++|+++|+|++++ +|++| +++++++||+++|+
T Consensus 343 ~~~~~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~ 422 (462)
T PTZ00472 343 LMFEMDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAAS 422 (462)
T ss_pred HHhhhccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEec
Confidence 3 37888899999999999999999999999999999999999999999976 45899 56899999999999
Q ss_pred ----ceEEEEEcCCCccCCccChHHHHHHHHHHHcCCCCC
Q 011469 448 ----GVIFTTVRGAGHLVPTYQPQRALIMISSFLEGKLPP 483 (485)
Q Consensus 448 ----~Ltf~~V~gAGHmVP~dqP~~al~l~~~fl~g~~~p 483 (485)
+|+|++|++||||||.|||+++++|+++|+.|+++.
T Consensus 423 ~~~~~l~~~~V~~AGH~vp~d~P~~~~~~i~~fl~~~~~~ 462 (462)
T PTZ00472 423 NTSSGFSFVQVYNAGHMVPMDQPAVALTMINRFLRNRPLS 462 (462)
T ss_pred ccCCCeEEEEECCCCccChhhHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999998763
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=4.2e-74 Score=583.70 Aligned_cols=306 Identities=28% Similarity=0.542 Sum_probs=264.6
Q ss_pred ccceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcC--
Q 011469 165 VANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKN-- 242 (485)
Q Consensus 165 ~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n-- 242 (485)
+|||||||||+||||||++++.++. +|+++|+|++.||+.||++||||+++||||+||||||||||.||++|+++|
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~~--~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~ 78 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 78 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCcc--ccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc
Confidence 5899999999999999988665543 677788999999999999999999999999999999999999999999988
Q ss_pred CCCceeeeeeeEecccccccccccchhhHHHhhccCCCHHHHHHHHhhccccC---CCCchhHHHHHHHHHHhhCCCccc
Q 011469 243 TSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFAT---GQLSTSCDQYQTQGVREYGQIDLY 319 (485)
Q Consensus 243 ~~~~~inLkGi~iGNg~id~~~~~~~~~~~~~~~gli~~~~~~~i~~~C~~~~---~~~~~~C~~~~~~~~~~~g~i~~Y 319 (485)
...++||||||+|||||++|..+..++.+|++.||+|++++++.+++.|.... ......|..+...+....+.+|+|
T Consensus 79 ~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~ 158 (319)
T PLN02213 79 CCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIH 158 (319)
T ss_pred ccCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHh
Confidence 24568999999999999999999999999999999999999999999996421 124567998888777777899999
Q ss_pred ccccccCCCCCCCCCCCCCcccCCCCCh---hHHHHHhChHHHHHHhcCCCC---CccccCccc-ccCCCCCchHHHHHH
Q 011469 320 NVYAPLCKSSAPPPPTAGVIREYDPCSD---KYVNSYLNLAEVQAALHAKHT---NWSTCSDLT-WTDSPSTVLPTIQQL 392 (485)
Q Consensus 320 ni~~~~C~~~~~~~~~~~~~~~~dpc~~---~~~~~ylN~~~Vq~AL~v~~~---~w~~cs~~v-~~d~~~s~~~~l~~L 392 (485)
|++.+.|..... ..+.|.. ..+..|||+++||+||||+.. .|..|+..+ +.....++.+.+.++
T Consensus 159 ~~~~~~~~~~~~---------~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~c~~~v~~~~d~~~~~~~~~~~ 229 (319)
T PLN02213 159 HILTPDCDVTNV---------TSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIPYNHDIVSSIPYHMNN 229 (319)
T ss_pred hcccCcccCccC---------CCCCcccchhHHHHHHhCCHHHHHHhCcCCCCCCCCccCCcccccccccccchHHHHHH
Confidence 998766642110 1135652 368999999999999999752 399999988 443233455555566
Q ss_pred hhcCcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecc-eEEEEEcCCCccCCccChHHHHH
Q 011469 393 IASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKG-VIFTTVRGAGHLVPTYQPQRALI 471 (485)
Q Consensus 393 l~~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~-Ltf~~V~gAGHmVP~dqP~~al~ 471 (485)
+..|+|||||+||.|++||+.|+++|+++|+|+++++|++|+.+++++||+++|++ |||++|+||||||| +||+++++
T Consensus 230 l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~ 308 (319)
T PLN02213 230 SISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFI 308 (319)
T ss_pred HhcCceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHH
Confidence 66789999999999999999999999999999999999999999999999999986 99999999999998 69999999
Q ss_pred HHHHHHcCCCC
Q 011469 472 MISSFLEGKLP 482 (485)
Q Consensus 472 l~~~fl~g~~~ 482 (485)
||++||.|+++
T Consensus 309 m~~~fi~~~~~ 319 (319)
T PLN02213 309 MFQRWISGQPL 319 (319)
T ss_pred HHHHHHcCCCC
Confidence 99999999875
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-66 Score=534.90 Aligned_cols=375 Identities=26% Similarity=0.503 Sum_probs=308.9
Q ss_pred CceeEeeeEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccc-cCccCccccc
Q 011469 88 DFDQYAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLY-RNEYAWNNVA 166 (485)
Q Consensus 88 ~~~~ysGyv~v~~~~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~-~N~~sWn~~a 166 (485)
+.++|+||.... ..+|||+||++++|.++|+|+||||||||||+ +|+|.|+||+||+.+.+... .||+||+..+
T Consensus 73 pv~~~~g~~d~e----d~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~~P~~~~NP~SW~~~a 147 (498)
T COG2939 73 PVRDYTGYPDAE----DFFFFYTFESPNDPANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGTSPSYPDNPGSWLDFA 147 (498)
T ss_pred chhhccCCcccc----eeEEEEEecCCCCCCCCceEEEecCCCChHhh-hhhhhhcCCeeeeCCCCCCCCCCccccccCC
Confidence 357777773332 23999999999999999999999999999999 79999999999999843333 6999999999
Q ss_pred ceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCC--CeEEEeccccccchHHHHHHHHHcC-C
Q 011469 167 NVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNR--DFFITGESYAGHYVPQLAYTILSKN-T 243 (485)
Q Consensus 167 nvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~--~~yI~GESYgG~YvP~lA~~I~~~n-~ 243 (485)
||||||||+||||||+... +.. .+.+.+.+|++.|++.|++.||+|.+. ++||+||||||||+|.||+.|+++| .
T Consensus 148 dLvFiDqPvGTGfS~a~~~-e~~-~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~ 225 (498)
T COG2939 148 DLVFIDQPVGTGFSRALGD-EKK-KDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIA 225 (498)
T ss_pred ceEEEecCcccCccccccc-ccc-cchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccc
Confidence 9999999999999998322 222 366789999999999999999999877 9999999999999999999999987 5
Q ss_pred CCceeeeeeeEeccc-ccccccccchhhHHHhhc----cCCCHHHHHHHHhhccccC----------CCCchhHHHHHHH
Q 011469 244 SKTIINLKGIAIGNA-WIDDNLCTKGMFDFFWTH----ALNSDETNAAINKYCDFAT----------GQLSTSCDQYQTQ 308 (485)
Q Consensus 244 ~~~~inLkGi~iGNg-~id~~~~~~~~~~~~~~~----gli~~~~~~~i~~~C~~~~----------~~~~~~C~~~~~~ 308 (485)
.+..+||++++|||| +|||..+...+..++..+ +..+.+.++++++.|.... ......|..+...
T Consensus 226 ~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~~ 305 (498)
T COG2939 226 LNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASAY 305 (498)
T ss_pred cCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHHH
Confidence 567899999999999 999999999999998864 4567788899988776421 1223457766655
Q ss_pred HHHhh------CC---CcccccccccCCCCCCCCCCCCCcccCCCCCh--hHHHHHhChHHHHHHhcCCCCCccccCccc
Q 011469 309 GVREY------GQ---IDLYNVYAPLCKSSAPPPPTAGVIREYDPCSD--KYVNSYLNLAEVQAALHAKHTNWSTCSDLT 377 (485)
Q Consensus 309 ~~~~~------g~---i~~Yni~~~~C~~~~~~~~~~~~~~~~dpc~~--~~~~~ylN~~~Vq~AL~v~~~~w~~cs~~v 377 (485)
+.... .+ .|.|+++. .|...... --|++ ..+..|++...+|+++......|..|+.++
T Consensus 306 ~~~~~~~~~~r~~~~~~n~y~~r~-~~~d~g~~----------~~~y~~~~~~ld~~~~~~~~~~~~~~~d~~~~c~t~a 374 (498)
T COG2939 306 LTGLMREYVGRAGGRLLNVYDIRE-ECRDPGLG----------GSCYDTLSTSLDYFNFDPEQEVNDPEVDNISGCTTDA 374 (498)
T ss_pred HHhcchhhhccccccccccccchh-hcCCCCcc----------cccccceeeccccccccchhccccccccchhccchHH
Confidence 55421 23 88999986 46542211 12443 357788998889999888877799999988
Q ss_pred cc-------CCCCCchHHHHHHhhcCcEEEEEecCCccccCchhHHHHHHHcCCCCCcccc-----cccc--CCccceEE
Q 011469 378 WT-------DSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWY-----PWYA--DGEVGGYV 443 (485)
Q Consensus 378 ~~-------d~~~s~~~~l~~Ll~~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~-----~w~~--~~~v~Gy~ 443 (485)
++ +........+..++.+++.+++|.||.|.+|++.+++.|..+|+|-+...|. +|.. ..+..|-+
T Consensus 375 ~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~ 454 (498)
T COG2939 375 MTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDASTPFFWSRLTLEEMGGY 454 (498)
T ss_pred HHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcCCCcccccchhhcccc
Confidence 33 5566677788889999999999999999999999999999999999998663 3433 45666777
Q ss_pred EeecceEEEEEcCCCccCCccChHHHHHHHHHHHcCC
Q 011469 444 LGYKGVIFTTVRGAGHLVPTYQPQRALIMISSFLEGK 480 (485)
Q Consensus 444 ~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~~~fl~g~ 480 (485)
+++++++|+.++.||||||+|+|+.+++|++.|+.+.
T Consensus 455 ~s~~n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~~ 491 (498)
T COG2939 455 KSYRNLTFLRIYEAGHMVPYDRPESSLEMVNLWINGY 491 (498)
T ss_pred cccCCceEEEEecCcceeecCChHHHHHHHHHHHhhc
Confidence 7788999999999999999999999999999999873
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-66 Score=501.89 Aligned_cols=379 Identities=24% Similarity=0.434 Sum_probs=318.0
Q ss_pred eEeeeEEecCCCCceEEEEEEecCCC-CCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceE
Q 011469 91 QYAGYLTVDPKAGRALFYYFVESPQS-SSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVL 169 (485)
Q Consensus 91 ~ysGyv~v~~~~~~~lFy~f~ea~~~-~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvL 169 (485)
+-.|||+|+ .+.++|+|++.+..+ ...+||.|||+||||.||.|||+|+|+||...+ +++|+.+|-+.|+||
T Consensus 3 ~~wg~v~vr--~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~-----~~~r~~TWlk~adll 75 (414)
T KOG1283|consen 3 EDWGYVDVR--TGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD-----GSPRDWTWLKDADLL 75 (414)
T ss_pred ccccceeee--cCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC-----CCcCCchhhhhccEE
Confidence 347999997 469999999998754 478999999999999999999999999999876 668999999999999
Q ss_pred EEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcC-CCCcee
Q 011469 170 FLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKN-TSKTII 248 (485)
Q Consensus 170 flDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n-~~~~~i 248 (485)
|||.|||+||||.+..+.|.+ +++++|.|+.+.|+.||..||||+.+||||+-|||||+..+.+|..+.+.. .+....
T Consensus 76 fvDnPVGaGfSyVdg~~~Y~~-~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~ 154 (414)
T KOG1283|consen 76 FVDNPVGAGFSYVDGSSAYTT-NNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKL 154 (414)
T ss_pred EecCCCcCceeeecCcccccc-cHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceee
Confidence 999999999999998887774 899999999999999999999999999999999999999999999998877 677889
Q ss_pred eeeeeEecccccccccccchhhHHHhhccCCCHHHHHHHHh---hccccC-----CCCchhHHHHHHHHHHhhCCCcccc
Q 011469 249 NLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINK---YCDFAT-----GQLSTSCDQYQTQGVREYGQIDLYN 320 (485)
Q Consensus 249 nLkGi~iGNg~id~~~~~~~~~~~~~~~gli~~~~~~~i~~---~C~~~~-----~~~~~~C~~~~~~~~~~~g~i~~Yn 320 (485)
|+.|+++|+.||+|..-..++.+|++..+++|+...+.+.+ .|.... ..++..+....+.+..+...+|.||
T Consensus 155 nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfYN 234 (414)
T KOG1283|consen 155 NFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFYN 234 (414)
T ss_pred cceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCcceee
Confidence 99999999999999999999999999999999988776643 343210 1122222333344556677899999
Q ss_pred cccccCCCCCCCC-----CC----CCCcccCC-CCChhHHHHHhChHHHHHHhcCCCCC--ccccCccccc----CCCCC
Q 011469 321 VYAPLCKSSAPPP-----PT----AGVIREYD-PCSDKYVNSYLNLAEVQAALHAKHTN--WSTCSDLTWT----DSPST 384 (485)
Q Consensus 321 i~~~~C~~~~~~~-----~~----~~~~~~~d-pc~~~~~~~ylN~~~Vq~AL~v~~~~--w~~cs~~v~~----d~~~s 384 (485)
|..+.-.+..... .. ++....+. +...+.+..+||-+ |+++|++.++. |-..+.++|. |+|++
T Consensus 235 il~~t~~d~~~~ss~~~~~~~~~~rrl~~~~~~~~~~D~L~~lM~g~-vrkkLgIip~~~~wGgqsg~vFt~lq~dFMKP 313 (414)
T KOG1283|consen 235 ILTKTLGDQYSLSSRAAMTPEEVMRRLLVRFVGDEDRDKLSDLMNGP-VRKKLGIIPGGVKWGGQSGDVFTKLQGDFMKP 313 (414)
T ss_pred eeccCCCcchhhhhhhhcchHHHHHHHHhccCcchhHHHHHHHhccc-ccccccccCCCCcccCcCCchHHHhhhhhccc
Confidence 9987654432211 00 01111111 12234588999987 89999999766 9999999964 89999
Q ss_pred chHHHHHHhhcCcEEEEEecCCccccCchhHHHHHHHcCCCCCcccc--cc---ccCCccceEEEeecceEEEEEcCCCc
Q 011469 385 VLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWY--PW---YADGEVGGYVLGYKGVIFTTVRGAGH 459 (485)
Q Consensus 385 ~~~~l~~Ll~~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~--~w---~~~~~v~Gy~~~y~~Ltf~~V~gAGH 459 (485)
+...+.+||++|+.|.||+|+.|.||.+.|+++|+++|+|+....+. +| +++-..+||.++|+||.|.+|..|||
T Consensus 314 vi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyknl~f~wilragh 393 (414)
T KOG1283|consen 314 VISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKNLSFFWILRAGH 393 (414)
T ss_pred HHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhccceeEEeecccC
Confidence 99999999999999999999999999999999999999999998664 34 35668899999999999999999999
Q ss_pred cCCccChHHHHHHHHHHHc
Q 011469 460 LVPTYQPQRALIMISSFLE 478 (485)
Q Consensus 460 mVP~dqP~~al~l~~~fl~ 478 (485)
|||.|+|+.|.+|++.+.+
T Consensus 394 mvp~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 394 MVPADNPAAASHMLRHVTK 412 (414)
T ss_pred cccCCCHHHHhhheeeccc
Confidence 9999999999999987653
No 9
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.45 E-value=7.7e-12 Score=121.81 Aligned_cols=131 Identities=24% Similarity=0.327 Sum_probs=82.5
Q ss_pred eEeeeEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEE
Q 011469 91 QYAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLF 170 (485)
Q Consensus 91 ~ysGyv~v~~~~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLf 170 (485)
++.++++++ +..+.|.-+.. +..+|.||+++||||+++..+..+.+. +.. +..+|+.
T Consensus 2 ~~~~~~~~~---~~~~~~~~~~~---~~~~~~vl~~hG~~g~~~~~~~~~~~~-----------l~~------~g~~vi~ 58 (288)
T TIGR01250 2 QIEGIITVD---GGYHLFTKTGG---EGEKIKLLLLHGGPGMSHEYLENLREL-----------LKE------EGREVIM 58 (288)
T ss_pred CccceecCC---CCeEEEEeccC---CCCCCeEEEEcCCCCccHHHHHHHHHH-----------HHh------cCCEEEE
Confidence 456677765 23444443322 234688999999999987533333221 111 2488999
Q ss_pred EeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeee
Q 011469 171 LETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINL 250 (485)
Q Consensus 171 lDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inL 250 (485)
+|. +|.|.|.......-. .+.+..++|+..++. . +..++++|.|+|+||..+..+|....+ .+
T Consensus 59 ~d~-~G~G~s~~~~~~~~~-~~~~~~~~~~~~~~~----~---~~~~~~~liG~S~Gg~ia~~~a~~~p~--------~v 121 (288)
T TIGR01250 59 YDQ-LGCGYSDQPDDSDEL-WTIDYFVDELEEVRE----K---LGLDKFYLLGHSWGGMLAQEYALKYGQ--------HL 121 (288)
T ss_pred EcC-CCCCCCCCCCccccc-ccHHHHHHHHHHHHH----H---cCCCcEEEEEeehHHHHHHHHHHhCcc--------cc
Confidence 996 599988643222100 144566676655444 2 344679999999999999998875432 38
Q ss_pred eeeEecccccc
Q 011469 251 KGIAIGNAWID 261 (485)
Q Consensus 251 kGi~iGNg~id 261 (485)
+++++.++...
T Consensus 122 ~~lvl~~~~~~ 132 (288)
T TIGR01250 122 KGLIISSMLDS 132 (288)
T ss_pred ceeeEeccccc
Confidence 89988887653
No 10
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.42 E-value=6.2e-12 Score=120.75 Aligned_cols=116 Identities=21% Similarity=0.301 Sum_probs=78.1
Q ss_pred EEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCCC
Q 011469 107 FYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSS 186 (485)
Q Consensus 107 Fy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~ 186 (485)
+|..+.. ...+.|+||+++|.+|.+.. +..+.+ .+.+..+|+.+|. .|.|.|-.....
T Consensus 2 ~~~~~~~--~~~~~~~iv~lhG~~~~~~~-~~~~~~------------------~l~~~~~vi~~D~-~G~G~S~~~~~~ 59 (257)
T TIGR03611 2 HYELHGP--PDADAPVVVLSSGLGGSGSY-WAPQLD------------------VLTQRFHVVTYDH-RGTGRSPGELPP 59 (257)
T ss_pred EEEEecC--CCCCCCEEEEEcCCCcchhH-HHHHHH------------------HHHhccEEEEEcC-CCCCCCCCCCcc
Confidence 4555433 22467999999998776655 433221 1224579999995 699998643322
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccccc
Q 011469 187 DYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (485)
Q Consensus 187 ~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~ 262 (485)
.+ +.++.++|+.+++. . ++..+++|+|+|+||..+..+|....+. ++++++.+++..+
T Consensus 60 ~~---~~~~~~~~~~~~i~----~---~~~~~~~l~G~S~Gg~~a~~~a~~~~~~--------v~~~i~~~~~~~~ 117 (257)
T TIGR03611 60 GY---SIAHMADDVLQLLD----A---LNIERFHFVGHALGGLIGLQLALRYPER--------LLSLVLINAWSRP 117 (257)
T ss_pred cC---CHHHHHHHHHHHHH----H---hCCCcEEEEEechhHHHHHHHHHHChHH--------hHHheeecCCCCC
Confidence 22 44566666666554 2 2346799999999999999998765444 8899888887654
No 11
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.38 E-value=1.3e-10 Score=116.71 Aligned_cols=140 Identities=23% Similarity=0.291 Sum_probs=90.7
Q ss_pred cCCccccCCCCCCCCCceeEeeeEEecCCCCc--eEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcC
Q 011469 73 EADKIKTLPGQPEGVDFDQYAGYLTVDPKAGR--ALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNS 150 (485)
Q Consensus 73 ~~~~v~~lPg~~~~~~~~~ysGyv~v~~~~~~--~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~ 150 (485)
.+.++.+||.+|.. -.|+.++...|. .++|.-. .++ +.|.||.++|.|+.+.. +..+.+
T Consensus 7 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~y~~~---G~~-~~~~lvliHG~~~~~~~-w~~~~~-------- 67 (302)
T PRK00870 7 PDSRFENLPDYPFA------PHYVDVDDGDGGPLRMHYVDE---GPA-DGPPVLLLHGEPSWSYL-YRKMIP-------- 67 (302)
T ss_pred CcccccCCcCCCCC------ceeEeecCCCCceEEEEEEec---CCC-CCCEEEEECCCCCchhh-HHHHHH--------
Confidence 34678899988752 457888864444 4666532 122 46789999999776666 433331
Q ss_pred CCCccccCccCcccccceEEEeCCCCccccccCCC-CCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccc
Q 011469 151 DGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTS-SDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGH 229 (485)
Q Consensus 151 ~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~-~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~ 229 (485)
.|.. +..+|+.+|. .|.|.|-.... .++ +.++.|+|+.++|. . ....++.|.|||+||.
T Consensus 68 ---~L~~------~gy~vi~~Dl-~G~G~S~~~~~~~~~---~~~~~a~~l~~~l~----~---l~~~~v~lvGhS~Gg~ 127 (302)
T PRK00870 68 ---ILAA------AGHRVIAPDL-IGFGRSDKPTRREDY---TYARHVEWMRSWFE----Q---LDLTDVTLVCQDWGGL 127 (302)
T ss_pred ---HHHh------CCCEEEEECC-CCCCCCCCCCCcccC---CHHHHHHHHHHHHH----H---cCCCCEEEEEEChHHH
Confidence 1111 3589999995 68888832211 111 44556666655554 3 3346899999999999
Q ss_pred chHHHHHHHHHcCCCCceeeeeeeEecccc
Q 011469 230 YVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (485)
Q Consensus 230 YvP~lA~~I~~~n~~~~~inLkGi~iGNg~ 259 (485)
.+-.+|.+-.+. ++++++.++.
T Consensus 128 ia~~~a~~~p~~--------v~~lvl~~~~ 149 (302)
T PRK00870 128 IGLRLAAEHPDR--------FARLVVANTG 149 (302)
T ss_pred HHHHHHHhChhh--------eeEEEEeCCC
Confidence 999888765444 8888887764
No 12
>PHA02857 monoglyceride lipase; Provisional
Probab=99.34 E-value=8.4e-11 Score=116.24 Aligned_cols=125 Identities=14% Similarity=0.134 Sum_probs=84.2
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCccc-ccceEEEeCCCCcccc
Q 011469 102 AGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNN-VANVLFLETPAGVGFS 180 (485)
Q Consensus 102 ~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~-~anvLflDqPvGvGFS 180 (485)
.|..|||.+++.. +..+|+||.++|..++|.. |-.+.+ .+.+ -..++.+| ..|.|.|
T Consensus 9 ~g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~-~~~~~~------------------~l~~~g~~via~D-~~G~G~S 66 (276)
T PHA02857 9 DNDYIYCKYWKPI--TYPKALVFISHGAGEHSGR-YEELAE------------------NISSLGILVFSHD-HIGHGRS 66 (276)
T ss_pred CCCEEEEEeccCC--CCCCEEEEEeCCCccccch-HHHHHH------------------HHHhCCCEEEEcc-CCCCCCC
Confidence 5778999888774 3456899999999666555 433321 2333 37899999 5799998
Q ss_pred ccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccc
Q 011469 181 YSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (485)
Q Consensus 181 y~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~i 260 (485)
-.+... . .+-....+|+.+++....+++ ...+++|.|+|+||..+..+|.+-. -+++|+++.+|.+
T Consensus 67 ~~~~~~-~--~~~~~~~~d~~~~l~~~~~~~---~~~~~~lvG~S~GG~ia~~~a~~~p--------~~i~~lil~~p~~ 132 (276)
T PHA02857 67 NGEKMM-I--DDFGVYVRDVVQHVVTIKSTY---PGVPVFLLGHSMGATISILAAYKNP--------NLFTAMILMSPLV 132 (276)
T ss_pred CCccCC-c--CCHHHHHHHHHHHHHHHHhhC---CCCCEEEEEcCchHHHHHHHHHhCc--------cccceEEEecccc
Confidence 543211 1 122345677777665544444 3578999999999997777775432 2389999999877
Q ss_pred cc
Q 011469 261 DD 262 (485)
Q Consensus 261 d~ 262 (485)
++
T Consensus 133 ~~ 134 (276)
T PHA02857 133 NA 134 (276)
T ss_pred cc
Confidence 63
No 13
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.34 E-value=7.8e-11 Score=115.34 Aligned_cols=109 Identities=17% Similarity=0.088 Sum_probs=73.4
Q ss_pred CCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCCCCCCCCCChh
Q 011469 116 SSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNN 195 (485)
Q Consensus 116 ~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~ 195 (485)
.+.+.|.||+++|.+|.+.. +..+.+ .+ .+.++|+.+|. .|.|.|....... .+.+.
T Consensus 24 g~~~~~~vv~~hG~~~~~~~-~~~~~~-----------~l-------~~~~~vi~~D~-~G~G~S~~~~~~~---~~~~~ 80 (278)
T TIGR03056 24 GPTAGPLLLLLHGTGASTHS-WRDLMP-----------PL-------ARSFRVVAPDL-PGHGFTRAPFRFR---FTLPS 80 (278)
T ss_pred CCCCCCeEEEEcCCCCCHHH-HHHHHH-----------HH-------hhCcEEEeecC-CCCCCCCCccccC---CCHHH
Confidence 33456899999999776555 433321 12 23478999995 6999886433212 25566
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccccc
Q 011469 196 TAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (485)
Q Consensus 196 ~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~ 262 (485)
.|+|+.++++. +..++++|.|+|+||..+..+|.+..+ .++++++.++..++
T Consensus 81 ~~~~l~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~p~--------~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 81 MAEDLSALCAA-------EGLSPDGVIGHSAGAAIALRLALDGPV--------TPRMVVGINAALMP 132 (278)
T ss_pred HHHHHHHHHHH-------cCCCCceEEEECccHHHHHHHHHhCCc--------ccceEEEEcCcccc
Confidence 77777766642 234688999999999988888765432 37889988887654
No 14
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.33 E-value=2.3e-11 Score=118.16 Aligned_cols=104 Identities=14% Similarity=0.143 Sum_probs=76.5
Q ss_pred CCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCCCCCCCCCCh
Q 011469 115 QSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDN 194 (485)
Q Consensus 115 ~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~ 194 (485)
+++.++|.||+++|.+|.+.. ++.+.+ .+.+..+|+.+|. .|.|.|.... . .+.+
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~-~~~~~~------------------~l~~~~~vi~~D~-~G~G~s~~~~--~---~~~~ 65 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDN-LGVLAR------------------DLVNDHDIIQVDM-RNHGLSPRDP--V---MNYP 65 (255)
T ss_pred CCCCCCCCEEEECCCCCchhH-HHHHHH------------------HHhhCCeEEEECC-CCCCCCCCCC--C---CCHH
Confidence 456788999999999887766 544432 1234579999996 5888886422 2 2556
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccc
Q 011469 195 NTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNA 258 (485)
Q Consensus 195 ~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg 258 (485)
+.++|+.++|.. +..++++|.|+|+||..+..+|.+..+. ++++++.++
T Consensus 66 ~~~~d~~~~l~~-------l~~~~~~lvGhS~Gg~va~~~a~~~~~~--------v~~lvli~~ 114 (255)
T PRK10673 66 AMAQDLLDTLDA-------LQIEKATFIGHSMGGKAVMALTALAPDR--------IDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHHHH-------cCCCceEEEEECHHHHHHHHHHHhCHhh--------cceEEEEec
Confidence 778888887764 2346799999999999999998775554 888888653
No 15
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.31 E-value=1e-10 Score=116.87 Aligned_cols=123 Identities=15% Similarity=0.128 Sum_probs=83.1
Q ss_pred eEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCC
Q 011469 95 YLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETP 174 (485)
Q Consensus 95 yv~v~~~~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqP 174 (485)
|++++ +.+++|.-. .+ ..|.||+|+|.++.+.. +-.+.+ .+.+.++|+.+|.
T Consensus 12 ~~~~~---~~~i~y~~~----G~-~~~~vlllHG~~~~~~~-w~~~~~------------------~L~~~~~vi~~Dl- 63 (294)
T PLN02824 12 TWRWK---GYNIRYQRA----GT-SGPALVLVHGFGGNADH-WRKNTP------------------VLAKSHRVYAIDL- 63 (294)
T ss_pred eEEEc---CeEEEEEEc----CC-CCCeEEEECCCCCChhH-HHHHHH------------------HHHhCCeEEEEcC-
Confidence 56664 455665432 11 23789999999888776 544442 1234569999995
Q ss_pred CCccccccCCCCCCC---CCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeee
Q 011469 175 AGVGFSYSNTSSDYS---NPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLK 251 (485)
Q Consensus 175 vGvGFSy~~~~~~~~---~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLk 251 (485)
.|.|.|......... ..+.++.|+|+.++|.+. ..++++|.|+|+||..+-.+|.+..+. ++
T Consensus 64 pG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~~--------v~ 128 (294)
T PLN02824 64 LGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPEL--------VR 128 (294)
T ss_pred CCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChhh--------ee
Confidence 799988643321100 124566777777766643 347899999999999999998876555 89
Q ss_pred eeEeccccc
Q 011469 252 GIAIGNAWI 260 (485)
Q Consensus 252 Gi~iGNg~i 260 (485)
++++.|+..
T Consensus 129 ~lili~~~~ 137 (294)
T PLN02824 129 GVMLINISL 137 (294)
T ss_pred EEEEECCCc
Confidence 999988765
No 16
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.30 E-value=7e-10 Score=109.50 Aligned_cols=61 Identities=13% Similarity=0.141 Sum_probs=53.6
Q ss_pred hcCcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHH
Q 011469 394 ASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMI 473 (485)
Q Consensus 394 ~~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~ 473 (485)
+..+||+++.|+.|.++|...++.+.+.+. +.+++.|.+|||+++.++|+...+++
T Consensus 221 ~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~------------------------~~~~~~i~~agH~~~~e~p~~~~~~i 276 (282)
T TIGR03343 221 EIKAKTLVTWGRDDRFVPLDHGLKLLWNMP------------------------DAQLHVFSRCGHWAQWEHADAFNRLV 276 (282)
T ss_pred hCCCCEEEEEccCCCcCCchhHHHHHHhCC------------------------CCEEEEeCCCCcCCcccCHHHHHHHH
Confidence 347899999999999999877777766654 56889999999999999999999999
Q ss_pred HHHHc
Q 011469 474 SSFLE 478 (485)
Q Consensus 474 ~~fl~ 478 (485)
..||.
T Consensus 277 ~~fl~ 281 (282)
T TIGR03343 277 IDFLR 281 (282)
T ss_pred HHHhh
Confidence 99985
No 17
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.26 E-value=2.8e-10 Score=113.92 Aligned_cols=59 Identities=12% Similarity=0.076 Sum_probs=49.5
Q ss_pred CcEEEEEecCCccccCchhH-HHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSS-RYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMIS 474 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt-~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~~ 474 (485)
.+||+|+.|+.|.+++.... +.+.+.+. +.++..|++|||+++.++|+...+++.
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~ip------------------------~~~~~~i~~aGH~~~~e~Pe~~~~~i~ 282 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATFP------------------------DHVLVELPNAKHFIQEDAPDRIAAAII 282 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhcC------------------------CCeEEEcCCCcccccccCHHHHHHHHH
Confidence 69999999999998876543 44444433 678999999999999999999999999
Q ss_pred HHHc
Q 011469 475 SFLE 478 (485)
Q Consensus 475 ~fl~ 478 (485)
+|+.
T Consensus 283 ~~~~ 286 (286)
T PRK03204 283 ERFG 286 (286)
T ss_pred HhcC
Confidence 9973
No 18
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.25 E-value=3.5e-10 Score=116.42 Aligned_cols=128 Identities=15% Similarity=0.209 Sum_probs=84.1
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCccc-ccceEEEeCCCCcccc
Q 011469 102 AGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNN-VANVLFLETPAGVGFS 180 (485)
Q Consensus 102 ~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~-~anvLflDqPvGvGFS 180 (485)
.|..+||...... +.+.+|+||+++|..+.++..+-.+. ..+.+ -.+|+-+|. .|.|.|
T Consensus 70 ~g~~l~~~~~~p~-~~~~~~~iv~lHG~~~~~~~~~~~~~------------------~~l~~~g~~v~~~D~-~G~G~S 129 (349)
T PLN02385 70 RGVEIFSKSWLPE-NSRPKAAVCFCHGYGDTCTFFFEGIA------------------RKIASSGYGVFAMDY-PGFGLS 129 (349)
T ss_pred CCCEEEEEEEecC-CCCCCeEEEEECCCCCccchHHHHHH------------------HHHHhCCCEEEEecC-CCCCCC
Confidence 4678888766543 22567999999997554443111111 12333 488999997 699988
Q ss_pred ccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccc
Q 011469 181 YSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (485)
Q Consensus 181 y~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~i 260 (485)
-... .+. .+-++.++|+.+++.. +...+++...+++|.|+|+||..+..+|.+-.+ .++|+++.+|..
T Consensus 130 ~~~~--~~~-~~~~~~~~dv~~~l~~-l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~--------~v~glVLi~p~~ 197 (349)
T PLN02385 130 EGLH--GYI-PSFDDLVDDVIEHYSK-IKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPN--------AWDGAILVAPMC 197 (349)
T ss_pred CCCC--CCc-CCHHHHHHHHHHHHHH-HHhccccCCCCEEEEEeccchHHHHHHHHhCcc--------hhhheeEecccc
Confidence 5432 221 1446678888887654 444445667789999999999988777654332 389999988765
Q ss_pred c
Q 011469 261 D 261 (485)
Q Consensus 261 d 261 (485)
.
T Consensus 198 ~ 198 (349)
T PLN02385 198 K 198 (349)
T ss_pred c
Confidence 4
No 19
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.21 E-value=3.9e-10 Score=110.23 Aligned_cols=61 Identities=13% Similarity=0.021 Sum_probs=52.4
Q ss_pred hcCcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHH
Q 011469 394 ASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMI 473 (485)
Q Consensus 394 ~~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~ 473 (485)
+-.+||+|+.|+.|.++|....+...+.+. +..++.++++||+++.++|+...+.+
T Consensus 194 ~i~~P~lii~G~~D~~~~~~~~~~~~~~i~------------------------~~~~~~i~~~gH~~~~e~p~~f~~~l 249 (256)
T PRK10349 194 NVSMPFLRLYGYLDGLVPRKVVPMLDKLWP------------------------HSESYIFAKAAHAPFISHPAEFCHLL 249 (256)
T ss_pred hcCCCeEEEecCCCccCCHHHHHHHHHhCC------------------------CCeEEEeCCCCCCccccCHHHHHHHH
Confidence 347999999999999999887765555543 56899999999999999999999999
Q ss_pred HHHHc
Q 011469 474 SSFLE 478 (485)
Q Consensus 474 ~~fl~ 478 (485)
.+|-.
T Consensus 250 ~~~~~ 254 (256)
T PRK10349 250 VALKQ 254 (256)
T ss_pred HHHhc
Confidence 99864
No 20
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.20 E-value=7.9e-10 Score=112.62 Aligned_cols=137 Identities=18% Similarity=0.188 Sum_probs=86.3
Q ss_pred eeeEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCccc-ccceEEE
Q 011469 93 AGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNN-VANVLFL 171 (485)
Q Consensus 93 sGyv~v~~~~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~-~anvLfl 171 (485)
.++++.. .|..|+|+.+........+|+||+++|..+.++..+-.+ -..+++ -.+|+.+
T Consensus 34 ~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~------------------~~~L~~~Gy~V~~~ 93 (330)
T PLN02298 34 KSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQST------------------AIFLAQMGFACFAL 93 (330)
T ss_pred cceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHH------------------HHHHHhCCCEEEEe
Confidence 5566653 467888865543222245789999999843322111000 011333 4899999
Q ss_pred eCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeee
Q 011469 172 ETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLK 251 (485)
Q Consensus 172 DqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLk 251 (485)
|. .|.|.|-.. ..+. .+.+..++|+..|+.... ...++.+.+++|+|+|+||..+..+|..-. -.++
T Consensus 94 D~-rGhG~S~~~--~~~~-~~~~~~~~D~~~~i~~l~-~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p--------~~v~ 160 (330)
T PLN02298 94 DL-EGHGRSEGL--RAYV-PNVDLVVEDCLSFFNSVK-QREEFQGLPRFLYGESMGGAICLLIHLANP--------EGFD 160 (330)
T ss_pred cC-CCCCCCCCc--cccC-CCHHHHHHHHHHHHHHHH-hcccCCCCCEEEEEecchhHHHHHHHhcCc--------ccce
Confidence 97 688888432 1221 145677889888776443 333344568999999999998776665322 2389
Q ss_pred eeEeccccccc
Q 011469 252 GIAIGNAWIDD 262 (485)
Q Consensus 252 Gi~iGNg~id~ 262 (485)
|+++.+++.+.
T Consensus 161 ~lvl~~~~~~~ 171 (330)
T PLN02298 161 GAVLVAPMCKI 171 (330)
T ss_pred eEEEecccccC
Confidence 99998887653
No 21
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.16 E-value=1.8e-09 Score=102.48 Aligned_cols=61 Identities=30% Similarity=0.458 Sum_probs=52.7
Q ss_pred hcCcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHH
Q 011469 394 ASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMI 473 (485)
Q Consensus 394 ~~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~ 473 (485)
+-.+||++++|+.|.++|....+.+.+.+. +.++..+.++||+++.++|+...+.+
T Consensus 191 ~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~p~~~~~~i 246 (251)
T TIGR02427 191 AIAVPTLCIAGDQDGSTPPELVREIADLVP------------------------GARFAEIRGAGHIPCVEQPEAFNAAL 246 (251)
T ss_pred hcCCCeEEEEeccCCcCChHHHHHHHHhCC------------------------CceEEEECCCCCcccccChHHHHHHH
Confidence 346999999999999999987777766643 44789999999999999999999999
Q ss_pred HHHHc
Q 011469 474 SSFLE 478 (485)
Q Consensus 474 ~~fl~ 478 (485)
+.|+.
T Consensus 247 ~~fl~ 251 (251)
T TIGR02427 247 RDFLR 251 (251)
T ss_pred HHHhC
Confidence 99974
No 22
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.13 E-value=2.4e-10 Score=106.50 Aligned_cols=104 Identities=23% Similarity=0.282 Sum_probs=70.8
Q ss_pred EEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHH
Q 011469 123 VLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYT 202 (485)
Q Consensus 123 vLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~ 202 (485)
||+++|++|.+.. +-.+.+ .+ .+..+|+.+|. .|.|.|-.... +...+-++.++|+.+
T Consensus 1 vv~~hG~~~~~~~-~~~~~~-----------~l-------~~~~~v~~~d~-~G~G~s~~~~~--~~~~~~~~~~~~l~~ 58 (228)
T PF12697_consen 1 VVFLHGFGGSSES-WDPLAE-----------AL-------ARGYRVIAFDL-PGHGRSDPPPD--YSPYSIEDYAEDLAE 58 (228)
T ss_dssp EEEE-STTTTGGG-GHHHHH-----------HH-------HTTSEEEEEEC-TTSTTSSSHSS--GSGGSHHHHHHHHHH
T ss_pred eEEECCCCCCHHH-HHHHHH-----------HH-------hCCCEEEEEec-CCccccccccc--cCCcchhhhhhhhhh
Confidence 7899999887765 444432 12 25778999996 69998865432 111133445555555
Q ss_pred HHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccccc
Q 011469 203 FLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (485)
Q Consensus 203 fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~ 263 (485)
+| +... .++++|.|+|+||..+..+|.+..+. ++|+++.++.....
T Consensus 59 ~l----~~~~---~~~~~lvG~S~Gg~~a~~~a~~~p~~--------v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 59 LL----DALG---IKKVILVGHSMGGMIALRLAARYPDR--------VKGLVLLSPPPPLP 104 (228)
T ss_dssp HH----HHTT---TSSEEEEEETHHHHHHHHHHHHSGGG--------EEEEEEESESSSHH
T ss_pred cc----cccc---cccccccccccccccccccccccccc--------cccceeeccccccc
Confidence 44 4442 37899999999999999999775554 99999988887643
No 23
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.13 E-value=3e-09 Score=110.21 Aligned_cols=66 Identities=17% Similarity=0.237 Sum_probs=52.4
Q ss_pred cCcEEEEEecCCccccCchhH-HHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHH
Q 011469 395 SGIRVWIYSGDTDGRVPVTSS-RYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMI 473 (485)
Q Consensus 395 ~girVlIysGd~D~i~p~~gt-~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~ 473 (485)
-.+||||+.|+.|.++|..+. ..+++.|. +..++.++.+|.+|||+++.++|++..+.+
T Consensus 291 i~~PtLii~G~~D~~~p~~~~~~~~~~~l~--------------------~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I 350 (360)
T PLN02679 291 ISLPILVLWGDQDPFTPLDGPVGKYFSSLP--------------------SQLPNVTLYVLEGVGHCPHDDRPDLVHEKL 350 (360)
T ss_pred cCCCEEEEEeCCCCCcCchhhHHHHHHhhh--------------------ccCCceEEEEcCCCCCCccccCHHHHHHHH
Confidence 369999999999999998753 23444432 112356889999999999999999999999
Q ss_pred HHHHcCC
Q 011469 474 SSFLEGK 480 (485)
Q Consensus 474 ~~fl~g~ 480 (485)
.+||...
T Consensus 351 ~~FL~~~ 357 (360)
T PLN02679 351 LPWLAQL 357 (360)
T ss_pred HHHHHhc
Confidence 9999753
No 24
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.11 E-value=2.1e-09 Score=107.53 Aligned_cols=115 Identities=18% Similarity=0.240 Sum_probs=79.8
Q ss_pred CceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCcccccc
Q 011469 103 GRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYS 182 (485)
Q Consensus 103 ~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~ 182 (485)
|..++|.-. .+.|.||+++|.|+.+.. +-.+.+ .+.+...|+-+|. +|.|+|.-
T Consensus 16 g~~i~y~~~------G~g~~vvllHG~~~~~~~-w~~~~~------------------~L~~~~~via~D~-~G~G~S~~ 69 (295)
T PRK03592 16 GSRMAYIET------GEGDPIVFLHGNPTSSYL-WRNIIP------------------HLAGLGRCLAPDL-IGMGASDK 69 (295)
T ss_pred CEEEEEEEe------CCCCEEEEECCCCCCHHH-HHHHHH------------------HHhhCCEEEEEcC-CCCCCCCC
Confidence 456666532 134789999999887766 433321 1234458999996 68888853
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccccc
Q 011469 183 NTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (485)
Q Consensus 183 ~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~ 262 (485)
.. .++ +.+..|+|+..++.. +...+++|.|+|+||.++-.+|.+..+. ++++++.|+.+.+
T Consensus 70 ~~-~~~---~~~~~a~dl~~ll~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~p~~--------v~~lil~~~~~~~ 130 (295)
T PRK03592 70 PD-IDY---TFADHARYLDAWFDA-------LGLDDVVLVGHDWGSALGFDWAARHPDR--------VRGIAFMEAIVRP 130 (295)
T ss_pred CC-CCC---CHHHHHHHHHHHHHH-------hCCCCeEEEEECHHHHHHHHHHHhChhh--------eeEEEEECCCCCC
Confidence 32 222 456677777666653 3446899999999999999888876655 9999999986544
No 25
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.10 E-value=3.4e-09 Score=100.41 Aligned_cols=60 Identities=15% Similarity=0.087 Sum_probs=51.7
Q ss_pred hcCcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHH
Q 011469 394 ASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMI 473 (485)
Q Consensus 394 ~~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~ 473 (485)
+-..||+|.+|+.|.++|....+.+.+.+. +-++..+.++||+++.++|+...+.+
T Consensus 186 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~e~p~~~~~~i 241 (245)
T TIGR01738 186 NISVPFLRLYGYLDGLVPAKVVPYLDKLAP------------------------HSELYIFAKAAHAPFLSHAEAFCALL 241 (245)
T ss_pred cCCCCEEEEeecCCcccCHHHHHHHHHhCC------------------------CCeEEEeCCCCCCccccCHHHHHHHH
Confidence 346899999999999999888777665543 44788999999999999999999999
Q ss_pred HHHH
Q 011469 474 SSFL 477 (485)
Q Consensus 474 ~~fl 477 (485)
.+|+
T Consensus 242 ~~fi 245 (245)
T TIGR01738 242 VAFK 245 (245)
T ss_pred HhhC
Confidence 9986
No 26
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.05 E-value=5.7e-09 Score=103.40 Aligned_cols=117 Identities=17% Similarity=0.126 Sum_probs=78.2
Q ss_pred CceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCcccccc
Q 011469 103 GRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYS 182 (485)
Q Consensus 103 ~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~ 182 (485)
+..+.|+..+. + ..+|.||+++|-++.+.. +..+.+ . ..+..+|+.+|. .|.|.|-.
T Consensus 11 ~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~-w~~~~~-----------~-------L~~~~~vi~~Dl-~G~G~S~~ 67 (276)
T TIGR02240 11 GQSIRTAVRPG--K-EGLTPLLIFNGIGANLEL-VFPFIE-----------A-------LDPDLEVIAFDV-PGVGGSST 67 (276)
T ss_pred CcEEEEEEecC--C-CCCCcEEEEeCCCcchHH-HHHHHH-----------H-------hccCceEEEECC-CCCCCCCC
Confidence 45677876542 2 344678999986555444 433332 1 124579999995 78888853
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccc
Q 011469 183 NTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 261 (485)
Q Consensus 183 ~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id 261 (485)
. ..++ +.+..++|+.+|+.. +.-++++|.|+|+||..+-.+|.+-.+. ++++++.|+...
T Consensus 68 ~-~~~~---~~~~~~~~~~~~i~~-------l~~~~~~LvG~S~GG~va~~~a~~~p~~--------v~~lvl~~~~~~ 127 (276)
T TIGR02240 68 P-RHPY---RFPGLAKLAARMLDY-------LDYGQVNAIGVSWGGALAQQFAHDYPER--------CKKLILAATAAG 127 (276)
T ss_pred C-CCcC---cHHHHHHHHHHHHHH-------hCcCceEEEEECHHHHHHHHHHHHCHHH--------hhheEEeccCCc
Confidence 2 1221 445566776666654 2346899999999999998888776554 999999988764
No 27
>PLN02578 hydrolase
Probab=99.02 E-value=6.1e-09 Score=107.55 Aligned_cols=76 Identities=18% Similarity=0.187 Sum_probs=55.8
Q ss_pred cccceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCC
Q 011469 164 NVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNT 243 (485)
Q Consensus 164 ~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~ 243 (485)
+..+|+.+|. .|.|.|-.. ...| +.+..++|+.+|+.+. ...+++|.|+|+||..+..+|.+..+.
T Consensus 111 ~~~~v~~~D~-~G~G~S~~~-~~~~---~~~~~a~~l~~~i~~~-------~~~~~~lvG~S~Gg~ia~~~A~~~p~~-- 176 (354)
T PLN02578 111 KKYKVYALDL-LGFGWSDKA-LIEY---DAMVWRDQVADFVKEV-------VKEPAVLVGNSLGGFTALSTAVGYPEL-- 176 (354)
T ss_pred cCCEEEEECC-CCCCCCCCc-cccc---CHHHHHHHHHHHHHHh-------ccCCeEEEEECHHHHHHHHHHHhChHh--
Confidence 4588999997 588887533 2222 4455677777776643 246899999999999999988876655
Q ss_pred CCceeeeeeeEecccc
Q 011469 244 SKTIINLKGIAIGNAW 259 (485)
Q Consensus 244 ~~~~inLkGi~iGNg~ 259 (485)
++++++.|+.
T Consensus 177 ------v~~lvLv~~~ 186 (354)
T PLN02578 177 ------VAGVALLNSA 186 (354)
T ss_pred ------cceEEEECCC
Confidence 8999987764
No 28
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.00 E-value=3.1e-08 Score=104.28 Aligned_cols=120 Identities=13% Similarity=0.122 Sum_probs=76.2
Q ss_pred ceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccC
Q 011469 104 RALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSN 183 (485)
Q Consensus 104 ~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~ 183 (485)
+.+.+..++. ..++|.||.|+|.++.+.. +.... ..+.+..+|+.+|. .|.|.|-..
T Consensus 92 ~~~~~~~~~~---~~~~p~vvllHG~~~~~~~-~~~~~------------------~~L~~~~~vi~~D~-rG~G~S~~~ 148 (402)
T PLN02894 92 RFINTVTFDS---KEDAPTLVMVHGYGASQGF-FFRNF------------------DALASRFRVIAIDQ-LGWGGSSRP 148 (402)
T ss_pred CeEEEEEecC---CCCCCEEEEECCCCcchhH-HHHHH------------------HHHHhCCEEEEECC-CCCCCCCCC
Confidence 3455544443 2467999999999775554 32111 11234578999996 688888422
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccc
Q 011469 184 TSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (485)
Q Consensus 184 ~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~i 260 (485)
...+ .+.+++.+.+.+.+.+|.+.. ...+++|.|||+||..+-.+|.+-.+. ++++++.++..
T Consensus 149 -~~~~--~~~~~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~p~~--------v~~lvl~~p~~ 211 (402)
T PLN02894 149 -DFTC--KSTEETEAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKHPEH--------VQHLILVGPAG 211 (402)
T ss_pred -Cccc--ccHHHHHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhCchh--------hcEEEEECCcc
Confidence 1111 122334445566677777644 335899999999999888888665443 88988887764
No 29
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.99 E-value=7e-08 Score=100.86 Aligned_cols=132 Identities=17% Similarity=0.124 Sum_probs=82.8
Q ss_pred ceeEeeeEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccce
Q 011469 89 FDQYAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANV 168 (485)
Q Consensus 89 ~~~ysGyv~v~~~~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anv 168 (485)
+++-+|+... ..+-.+||. +. .+.+.|.||.|+|.|+.+.. +-.+.+ ...+..+|
T Consensus 102 ~~~~~~~~~~--~~~~~~~y~--~~--G~~~~~~ivllHG~~~~~~~-w~~~~~------------------~L~~~~~V 156 (383)
T PLN03084 102 LKMGAQSQAS--SDLFRWFCV--ES--GSNNNPPVLLIHGFPSQAYS-YRKVLP------------------VLSKNYHA 156 (383)
T ss_pred ccccceeEEc--CCceEEEEE--ec--CCCCCCeEEEECCCCCCHHH-HHHHHH------------------HHhcCCEE
Confidence 4455566553 234556654 22 33456899999999876655 433332 12345799
Q ss_pred EEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCcee
Q 011469 169 LFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTII 248 (485)
Q Consensus 169 LflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~i 248 (485)
+.+|. .|.|+|.......-...+.++.++|+..|+.. +...+++|+|+|+||..+-.+|....+.
T Consensus 157 ia~Dl-pG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~-------l~~~~~~LvG~s~GG~ia~~~a~~~P~~------- 221 (383)
T PLN03084 157 IAFDW-LGFGFSDKPQPGYGFNYTLDEYVSSLESLIDE-------LKSDKVSLVVQGYFSPPVVKYASAHPDK------- 221 (383)
T ss_pred EEECC-CCCCCCCCCcccccccCCHHHHHHHHHHHHHH-------hCCCCceEEEECHHHHHHHHHHHhChHh-------
Confidence 99995 79999864322100001445566666666653 2345799999999997766666654443
Q ss_pred eeeeeEecccccc
Q 011469 249 NLKGIAIGNAWID 261 (485)
Q Consensus 249 nLkGi~iGNg~id 261 (485)
++++++.|+...
T Consensus 222 -v~~lILi~~~~~ 233 (383)
T PLN03084 222 -IKKLILLNPPLT 233 (383)
T ss_pred -hcEEEEECCCCc
Confidence 899999887653
No 30
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.97 E-value=1.7e-08 Score=103.93 Aligned_cols=103 Identities=17% Similarity=0.122 Sum_probs=67.9
Q ss_pred CCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCCCCCCCCCChhhH
Q 011469 118 SSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTA 197 (485)
Q Consensus 118 ~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A 197 (485)
.+.|.||+++|.+|++.. +..+.+ .| .+..+|+-+|. .|.|.|-..... .+.++.+
T Consensus 129 ~~~~~vl~~HG~~~~~~~-~~~~~~-----------~l-------~~~~~v~~~d~-~g~G~s~~~~~~----~~~~~~~ 184 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNN-WLFNHA-----------AL-------AAGRPVIALDL-PGHGASSKAVGA----GSLDELA 184 (371)
T ss_pred CCCCeEEEECCCCCccch-HHHHHH-----------HH-------hcCCEEEEEcC-CCCCCCCCCCCC----CCHHHHH
Confidence 456889999999887766 444432 12 12378999995 689988432111 1444555
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccc
Q 011469 198 EDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (485)
Q Consensus 198 ~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~ 259 (485)
+++..++. . +...+++|.|+|+||..+..+|..-.+ .++++++.++.
T Consensus 185 ~~~~~~~~----~---~~~~~~~lvG~S~Gg~~a~~~a~~~~~--------~v~~lv~~~~~ 231 (371)
T PRK14875 185 AAVLAFLD----A---LGIERAHLVGHSMGGAVALRLAARAPQ--------RVASLTLIAPA 231 (371)
T ss_pred HHHHHHHH----h---cCCccEEEEeechHHHHHHHHHHhCch--------heeEEEEECcC
Confidence 55555443 3 344689999999999999988876433 27787776654
No 31
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.97 E-value=5.8e-08 Score=103.97 Aligned_cols=133 Identities=19% Similarity=0.197 Sum_probs=83.7
Q ss_pred eeEeeeEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhh-hhhcCCeEEcCCCCccccCccCcccccce
Q 011469 90 DQYAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGA-MEELGPFRVNSDGKTLYRNEYAWNNVANV 168 (485)
Q Consensus 90 ~~ysGyv~v~~~~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~-~~E~GP~~v~~~~~~l~~N~~sWn~~anv 168 (485)
+.-.-|++.+ +..|||...... +...+|.||+|+|.+|.+.. +.. +.+ .+.. .+.+...|
T Consensus 175 ~~~~~~~~~~---~~~l~~~~~gp~-~~~~k~~VVLlHG~~~s~~~-W~~~~~~-----------~L~~---~~~~~yrV 235 (481)
T PLN03087 175 KFCTSWLSSS---NESLFVHVQQPK-DNKAKEDVLFIHGFISSSAF-WTETLFP-----------NFSD---AAKSTYRL 235 (481)
T ss_pred ceeeeeEeeC---CeEEEEEEecCC-CCCCCCeEEEECCCCccHHH-HHHHHHH-----------HHHH---HhhCCCEE
Confidence 3445677764 367888866644 23345789999999887766 431 100 0111 23456899
Q ss_pred EEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCcee
Q 011469 169 LFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTII 248 (485)
Q Consensus 169 LflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~i 248 (485)
+.+|. .|.|.|-......+ +.++.++|+. ..+++. +...+++|.|+|+||..+-.+|.+-.+.
T Consensus 236 ia~Dl-~G~G~S~~p~~~~y---tl~~~a~~l~---~~ll~~---lg~~k~~LVGhSmGG~iAl~~A~~~Pe~------- 298 (481)
T PLN03087 236 FAVDL-LGFGRSPKPADSLY---TLREHLEMIE---RSVLER---YKVKSFHIVAHSLGCILALALAVKHPGA------- 298 (481)
T ss_pred EEECC-CCCCCCcCCCCCcC---CHHHHHHHHH---HHHHHH---cCCCCEEEEEECHHHHHHHHHHHhChHh-------
Confidence 99996 68888742211111 3344444442 234443 3456899999999999999998876554
Q ss_pred eeeeeEecccc
Q 011469 249 NLKGIAIGNAW 259 (485)
Q Consensus 249 nLkGi~iGNg~ 259 (485)
++++++.++-
T Consensus 299 -V~~LVLi~~~ 308 (481)
T PLN03087 299 -VKSLTLLAPP 308 (481)
T ss_pred -ccEEEEECCC
Confidence 8888887753
No 32
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.97 E-value=5.2e-08 Score=92.02 Aligned_cols=105 Identities=22% Similarity=0.318 Sum_probs=67.1
Q ss_pred CCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCCCCCCCCCChhhHHH
Q 011469 120 KPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAED 199 (485)
Q Consensus 120 ~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d 199 (485)
+|.||.++|.+|.+.. |-.+.+ .| + +..+|+-+|. +|.|.|.... .....+.++.++|
T Consensus 1 ~~~vv~~hG~~~~~~~-~~~~~~-----------~L-----~--~~~~v~~~d~-~g~G~s~~~~--~~~~~~~~~~~~~ 58 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD-WQALIE-----------LL-----G--PHFRCLAIDL-PGHGSSQSPD--EIERYDFEEAAQD 58 (251)
T ss_pred CCEEEEEcCCCCchhh-HHHHHH-----------Hh-----c--ccCeEEEEcC-CCCCCCCCCC--ccChhhHHHHHHH
Confidence 4889999998776665 432221 11 1 4479999995 6888884321 1111133444444
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccc
Q 011469 200 SYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (485)
Q Consensus 200 ~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~i 260 (485)
+ +..+.+++ ..++++|.|+|+||..+..+|.+..+ .++++++.++..
T Consensus 59 ~---~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~~--------~v~~lil~~~~~ 105 (251)
T TIGR03695 59 I---LATLLDQL---GIEPFFLVGYSMGGRIALYYALQYPE--------RVQGLILESGSP 105 (251)
T ss_pred H---HHHHHHHc---CCCeEEEEEeccHHHHHHHHHHhCch--------heeeeEEecCCC
Confidence 2 33333443 35789999999999999998886543 388888877654
No 33
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.96 E-value=3.9e-08 Score=99.33 Aligned_cols=126 Identities=18% Similarity=0.330 Sum_probs=79.2
Q ss_pred eeeEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCc-ccccceEEE
Q 011469 93 AGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAW-NNVANVLFL 171 (485)
Q Consensus 93 sGyv~v~~~~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sW-n~~anvLfl 171 (485)
.+|+.+.+ +..++|.-.. ++. .|-||+++||||.++.. .. . ..| .+..+|+.+
T Consensus 6 ~~~~~~~~--~~~l~y~~~g---~~~-~~~lvllHG~~~~~~~~-~~-~------------------~~~~~~~~~vi~~ 59 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQSG---NPD-GKPVVFLHGGPGSGTDP-GC-R------------------RFFDPETYRIVLF 59 (306)
T ss_pred CCeEEcCC--CcEEEEEECc---CCC-CCEEEEECCCCCCCCCH-HH-H------------------hccCccCCEEEEE
Confidence 47888863 5778875421 222 35578899999875531 00 0 011 145899999
Q ss_pred eCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeee
Q 011469 172 ETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLK 251 (485)
Q Consensus 172 DqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLk 251 (485)
|. .|.|.|..... ... .+.++.++|+..+ .+.. +..++++.|+||||..+-.+|.+..+. ++
T Consensus 60 D~-~G~G~S~~~~~-~~~-~~~~~~~~dl~~l----~~~l---~~~~~~lvG~S~GG~ia~~~a~~~p~~--------v~ 121 (306)
T TIGR01249 60 DQ-RGCGKSTPHAC-LEE-NTTWDLVADIEKL----REKL---GIKNWLVFGGSWGSTLALAYAQTHPEV--------VT 121 (306)
T ss_pred CC-CCCCCCCCCCC-ccc-CCHHHHHHHHHHH----HHHc---CCCCEEEEEECHHHHHHHHHHHHChHh--------hh
Confidence 96 69999864321 111 1333455555443 3333 345799999999999888888766554 78
Q ss_pred eeEeccccccc
Q 011469 252 GIAIGNAWIDD 262 (485)
Q Consensus 252 Gi~iGNg~id~ 262 (485)
++++.+..+..
T Consensus 122 ~lvl~~~~~~~ 132 (306)
T TIGR01249 122 GLVLRGIFLLR 132 (306)
T ss_pred hheeeccccCC
Confidence 88887776543
No 34
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.94 E-value=3.1e-08 Score=103.97 Aligned_cols=128 Identities=20% Similarity=0.191 Sum_probs=84.9
Q ss_pred CCCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcc-cccceEEEeCCCCccc
Q 011469 101 KAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWN-NVANVLFLETPAGVGF 179 (485)
Q Consensus 101 ~~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn-~~anvLflDqPvGvGF 179 (485)
..+..+|++.++... .+.+|+||+++|.++.+.. |-.+.+ .+. +-++|+-+|. .|.|.
T Consensus 118 ~~~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~-~~~~a~------------------~L~~~Gy~V~~~D~-rGhG~ 176 (395)
T PLN02652 118 ARRNALFCRSWAPAA-GEMRGILIIIHGLNEHSGR-YLHFAK------------------QLTSCGFGVYAMDW-IGHGG 176 (395)
T ss_pred CCCCEEEEEEecCCC-CCCceEEEEECCchHHHHH-HHHHHH------------------HHHHCCCEEEEeCC-CCCCC
Confidence 345688888776642 3457899999999776554 322221 122 3578999996 78888
Q ss_pred cccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccc
Q 011469 180 SYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (485)
Q Consensus 180 Sy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~ 259 (485)
|-... .+. .+.+..++|+..+++..-..+| ..+++|+|+|+||..+..+|.+ . +..-.++|+++.+|+
T Consensus 177 S~~~~--~~~-~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~~-p-----~~~~~v~glVL~sP~ 244 (395)
T PLN02652 177 SDGLH--GYV-PSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAASY-P-----SIEDKLEGIVLTSPA 244 (395)
T ss_pred CCCCC--CCC-cCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHhc-c-----CcccccceEEEECcc
Confidence 85432 222 1445677888888776666665 3589999999999887655531 1 111248999998888
Q ss_pred cc
Q 011469 260 ID 261 (485)
Q Consensus 260 id 261 (485)
++
T Consensus 245 l~ 246 (395)
T PLN02652 245 LR 246 (395)
T ss_pred cc
Confidence 64
No 35
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.93 E-value=3.4e-08 Score=101.46 Aligned_cols=62 Identities=15% Similarity=0.139 Sum_probs=53.4
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcC-CCccCCccChHHHHHHHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRG-AGHLVPTYQPQRALIMIS 474 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~g-AGHmVP~dqP~~al~l~~ 474 (485)
.+|+||+.|+.|.++|....+...+.+. .+-.++.|.+ |||+++.++|+....++.
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~-----------------------p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~ 333 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG-----------------------PRGSLRVLRSPYGHDAFLKETDRIDAILT 333 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC-----------------------CCCeEEEEeCCccHHHHhcCHHHHHHHHH
Confidence 6899999999999999988888777763 1347889985 999999999999999999
Q ss_pred HHHcCC
Q 011469 475 SFLEGK 480 (485)
Q Consensus 475 ~fl~g~ 480 (485)
+||...
T Consensus 334 ~FL~~~ 339 (343)
T PRK08775 334 TALRST 339 (343)
T ss_pred HHHHhc
Confidence 999753
No 36
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.92 E-value=2.2e-08 Score=96.54 Aligned_cols=100 Identities=19% Similarity=0.231 Sum_probs=68.1
Q ss_pred CCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCCCCCCCCCChhhHHH
Q 011469 120 KPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAED 199 (485)
Q Consensus 120 ~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d 199 (485)
+|.||+++|.+|.+.. +-.+.+ . . +.++|+.+| ..|.|.|.-.. . .+-++.|+|
T Consensus 2 ~p~vvllHG~~~~~~~-w~~~~~----------------~--l-~~~~vi~~D-~~G~G~S~~~~-~----~~~~~~~~~ 55 (242)
T PRK11126 2 LPWLVFLHGLLGSGQD-WQPVGE----------------A--L-PDYPRLYID-LPGHGGSAAIS-V----DGFADVSRL 55 (242)
T ss_pred CCEEEEECCCCCChHH-HHHHHH----------------H--c-CCCCEEEec-CCCCCCCCCcc-c----cCHHHHHHH
Confidence 5889999999887765 433321 1 1 248999999 57888885321 1 144556667
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccc
Q 011469 200 SYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (485)
Q Consensus 200 ~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~ 259 (485)
+.++|.. +...+++++|+|+||..+-.+|.+.... .++++++.++.
T Consensus 56 l~~~l~~-------~~~~~~~lvG~S~Gg~va~~~a~~~~~~-------~v~~lvl~~~~ 101 (242)
T PRK11126 56 LSQTLQS-------YNILPYWLVGYSLGGRIAMYYACQGLAG-------GLCGLIVEGGN 101 (242)
T ss_pred HHHHHHH-------cCCCCeEEEEECHHHHHHHHHHHhCCcc-------cccEEEEeCCC
Confidence 6666552 3457999999999999888888764221 17888887654
No 37
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.90 E-value=1.1e-07 Score=95.88 Aligned_cols=286 Identities=13% Similarity=0.158 Sum_probs=153.7
Q ss_pred eeeEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEe
Q 011469 93 AGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLE 172 (485)
Q Consensus 93 sGyv~v~~~~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflD 172 (485)
+=|+.+... .. -|.++-...+++++-++.++|= |.++. + ..+|=-+..+.-||..||
T Consensus 67 ~~~v~i~~~--~~--iw~~~~~~~~~~~~plVliHGy-GAg~g---~---------------f~~Nf~~La~~~~vyaiD 123 (365)
T KOG4409|consen 67 KKYVRIPNG--IE--IWTITVSNESANKTPLVLIHGY-GAGLG---L---------------FFRNFDDLAKIRNVYAID 123 (365)
T ss_pred eeeeecCCC--ce--eEEEeecccccCCCcEEEEecc-chhHH---H---------------HHHhhhhhhhcCceEEec
Confidence 445666522 22 2444443344666667778883 33332 2 223444556688999999
Q ss_pred CCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeee
Q 011469 173 TPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKG 252 (485)
Q Consensus 173 qPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkG 252 (485)
. .|-|+|--. .-+. +-+..-+.+.+-+.+|....- =.+.+|.|||+||......|.+..++ ++-
T Consensus 124 l-lG~G~SSRP-~F~~---d~~~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLaa~YAlKyPer--------V~k 187 (365)
T KOG4409|consen 124 L-LGFGRSSRP-KFSI---DPTTAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLAAKYALKYPER--------VEK 187 (365)
T ss_pred c-cCCCCCCCC-CCCC---CcccchHHHHHHHHHHHHHcC---CcceeEeeccchHHHHHHHHHhChHh--------hce
Confidence 5 688887432 2211 222333478888999998762 34899999999999998899888777 899
Q ss_pred eEeccccccccccc-c---hhhHHHhhccCC----CHHHHHHHHhhccccCCCCchhHHHHHHHHHHhhCCCcccccccc
Q 011469 253 IAIGNAWIDDNLCT-K---GMFDFFWTHALN----SDETNAAINKYCDFATGQLSTSCDQYQTQGVREYGQIDLYNVYAP 324 (485)
Q Consensus 253 i~iGNg~id~~~~~-~---~~~~~~~~~gli----~~~~~~~i~~~C~~~~~~~~~~C~~~~~~~~~~~g~i~~Yni~~~ 324 (485)
+++.+||--+.... . .-....|...+. .......++-.- +.....|...........-+.-
T Consensus 188 LiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~G----p~Gp~Lv~~~~~d~~~k~~~~~------- 256 (365)
T KOG4409|consen 188 LILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMG----PLGPKLVSRLRPDRFRKFPSLI------- 256 (365)
T ss_pred EEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhcc----ccchHHHhhhhHHHHHhccccc-------
Confidence 99999998776331 0 000111111000 011111111111 1122233332222221110000
Q ss_pred cCCCCCCCCCCCCCcccCCCCChhHHHHHhChHHHHHHhcCCCCCccccCccc---ccCCCCCchHHHHHHhhcCcEEEE
Q 011469 325 LCKSSAPPPPTAGVIREYDPCSDKYVNSYLNLAEVQAALHAKHTNWSTCSDLT---WTDSPSTVLPTIQQLIASGIRVWI 401 (485)
Q Consensus 325 ~C~~~~~~~~~~~~~~~~dpc~~~~~~~ylN~~~Vq~AL~v~~~~w~~cs~~v---~~d~~~s~~~~l~~Ll~~girVlI 401 (485)
..+.+..|. -.....+++. +.|-..+ ..-.-.+++..+.+|-. .++|++
T Consensus 257 ---------------------~ed~l~~Yi-----Y~~n~~~psg-E~~fk~l~~~~g~Ar~Pm~~r~~~l~~-~~pv~f 308 (365)
T KOG4409|consen 257 ---------------------EEDFLHEYI-----YHCNAQNPSG-ETAFKNLFEPGGWARRPMIQRLRELKK-DVPVTF 308 (365)
T ss_pred ---------------------hhHHHHHHH-----HHhcCCCCcH-HHHHHHHHhccchhhhhHHHHHHhhcc-CCCEEE
Confidence 011122221 0001111110 0000000 00122345555555533 599999
Q ss_pred EecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHHHHHHcC
Q 011469 402 YSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMISSFLEG 479 (485)
Q Consensus 402 ysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~~~fl~g 479 (485)
+.|+.|++--..|.+..-..+. .....+.|.+|||.|-.|+|+...+++..++..
T Consensus 309 iyG~~dWmD~~~g~~~~~~~~~-----------------------~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 309 IYGDRDWMDKNAGLEVTKSLMK-----------------------EYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred EecCcccccchhHHHHHHHhhc-----------------------ccceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 9999999877666544332211 134789999999999999999999999998864
No 38
>PRK10749 lysophospholipase L2; Provisional
Probab=98.90 E-value=6.1e-08 Score=99.09 Aligned_cols=127 Identities=14% Similarity=0.107 Sum_probs=80.3
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccc
Q 011469 102 AGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSY 181 (485)
Q Consensus 102 ~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy 181 (485)
.|..++|+.+... ..+|+||.++|-.+.+.. |.-+.. . +. .+-.+|+-+|. .|.|.|-
T Consensus 39 ~g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~-y~~~~~---~--------l~------~~g~~v~~~D~-~G~G~S~ 96 (330)
T PRK10749 39 DDIPIRFVRFRAP---HHDRVVVICPGRIESYVK-YAELAY---D--------LF------HLGYDVLIIDH-RGQGRSG 96 (330)
T ss_pred CCCEEEEEEccCC---CCCcEEEEECCccchHHH-HHHHHH---H--------HH------HCCCeEEEEcC-CCCCCCC
Confidence 3567888877642 456889999998554433 322221 0 10 13478999995 7999985
Q ss_pred cCCCCCC--CCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccc
Q 011469 182 SNTSSDY--SNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (485)
Q Consensus 182 ~~~~~~~--~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~ 259 (485)
....... ...+-++.++|+..++....+.+ ...++++.|+|+||..+-.+|.+-.+ .++|+++.+|.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~~~l~GhSmGG~ia~~~a~~~p~--------~v~~lvl~~p~ 165 (330)
T PRK10749 97 RLLDDPHRGHVERFNDYVDDLAAFWQQEIQPG---PYRKRYALAHSMGGAILTLFLQRHPG--------VFDAIALCAPM 165 (330)
T ss_pred CCCCCCCcCccccHHHHHHHHHHHHHHHHhcC---CCCCeEEEEEcHHHHHHHHHHHhCCC--------CcceEEEECch
Confidence 3211100 00134567777777776554433 45789999999999887777654322 38999998887
Q ss_pred cc
Q 011469 260 ID 261 (485)
Q Consensus 260 id 261 (485)
..
T Consensus 166 ~~ 167 (330)
T PRK10749 166 FG 167 (330)
T ss_pred hc
Confidence 54
No 39
>PRK06489 hypothetical protein; Provisional
Probab=98.87 E-value=1.1e-07 Score=98.53 Aligned_cols=61 Identities=13% Similarity=0.126 Sum_probs=49.6
Q ss_pred cCcEEEEEecCCccccCchhH--HHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCC----CccCCccChHH
Q 011469 395 SGIRVWIYSGDTDGRVPVTSS--RYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGA----GHLVPTYQPQR 468 (485)
Q Consensus 395 ~girVlIysGd~D~i~p~~gt--~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gA----GHmVP~dqP~~ 468 (485)
-.+||||++|+.|.++|.... +...+.+. +..+++|.+| ||++. ++|+.
T Consensus 291 I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip------------------------~a~l~~i~~a~~~~GH~~~-e~P~~ 345 (360)
T PRK06489 291 IKAPVLAINSADDERNPPETGVMEAALKRVK------------------------HGRLVLIPASPETRGHGTT-GSAKF 345 (360)
T ss_pred CCCCEEEEecCCCcccChhhHHHHHHHHhCc------------------------CCeEEEECCCCCCCCcccc-cCHHH
Confidence 479999999999999998764 44444432 4578999996 99986 89999
Q ss_pred HHHHHHHHHcCC
Q 011469 469 ALIMISSFLEGK 480 (485)
Q Consensus 469 al~l~~~fl~g~ 480 (485)
..+.+.+||...
T Consensus 346 ~~~~i~~FL~~~ 357 (360)
T PRK06489 346 WKAYLAEFLAQV 357 (360)
T ss_pred HHHHHHHHHHhc
Confidence 999999999653
No 40
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.84 E-value=3.8e-08 Score=109.14 Aligned_cols=136 Identities=21% Similarity=0.267 Sum_probs=87.8
Q ss_pred EEecCCCCceEEEEEEecCC-CCC-CCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeC
Q 011469 96 LTVDPKAGRALFYYFVESPQ-SSS-SKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLET 173 (485)
Q Consensus 96 v~v~~~~~~~lFy~f~ea~~-~~~-~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDq 173 (485)
+.+....|..+..|++.-.. ++. +-|+|++++||| +++ +|. .++. .-..=+.+-++||+++
T Consensus 368 ~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~-~~~-------~~~~------~~q~~~~~G~~V~~~n- 430 (620)
T COG1506 368 VTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQ-VGY-------SFNP------EIQVLASAGYAVLAPN- 430 (620)
T ss_pred EEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccc-ccc-------ccch------hhHHHhcCCeEEEEeC-
Confidence 44444457789999888754 333 349999999999 555 330 1111 1112245778999999
Q ss_pred CCCccc---cccCCCC-CCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceee
Q 011469 174 PAGVGF---SYSNTSS-DYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIIN 249 (485)
Q Consensus 174 PvGvGF---Sy~~~~~-~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~in 249 (485)
|.|.+. .|..... ++ + ....+|+..++. |+++.|.....++.|+|.||||...-.++.+-. .
T Consensus 431 ~RGS~GyG~~F~~~~~~~~---g-~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~---------~ 496 (620)
T COG1506 431 YRGSTGYGREFADAIRGDW---G-GVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP---------R 496 (620)
T ss_pred CCCCCccHHHHHHhhhhcc---C-CccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc---------h
Confidence 787643 2222111 11 2 246789999898 999999888889999999999986555544321 3
Q ss_pred eeeeEeccccccc
Q 011469 250 LKGIAIGNAWIDD 262 (485)
Q Consensus 250 LkGi~iGNg~id~ 262 (485)
+|..+...+.++.
T Consensus 497 f~a~~~~~~~~~~ 509 (620)
T COG1506 497 FKAAVAVAGGVDW 509 (620)
T ss_pred hheEEeccCcchh
Confidence 6666666555544
No 41
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.84 E-value=1.8e-07 Score=96.04 Aligned_cols=153 Identities=14% Similarity=0.087 Sum_probs=87.8
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhc-------CCeEEcCCCCccccC---ccCc-ccccceEE
Q 011469 102 AGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEEL-------GPFRVNSDGKTLYRN---EYAW-NNVANVLF 170 (485)
Q Consensus 102 ~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~-------GP~~v~~~~~~l~~N---~~sW-n~~anvLf 170 (485)
.|..|+++..+.. ..+-+|+.++|= |..+. +-.+.-+ +|+.|+.+.. ...+ -..+ .+-.+|+-
T Consensus 6 ~g~~l~~~~~~~~---~~kg~v~i~HG~-~eh~~-~~~~~~~~~~~~~~~~~~~~~~ry-~~y~~~~~~~l~~~G~~V~~ 79 (332)
T TIGR01607 6 DGLLLKTYSWIVK---NAIGIIVLIHGL-KSHLR-LQFLKINAKIVNNDRAVLIDTDNY-YIYKDSWIENFNKNGYSVYG 79 (332)
T ss_pred CCCeEEEeeeecc---CCeEEEEEECCC-chhhh-hhhhhcCcccCCCCeeEEEcCCcc-eEeeHHHHHHHHHCCCcEEE
Confidence 4667888777653 345688888884 33332 1222111 3444433210 0000 0123 24589999
Q ss_pred EeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHC----------------CCCC-CCCeEEEeccccccchHH
Q 011469 171 LETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERF----------------PQYK-NRDFFITGESYAGHYVPQ 233 (485)
Q Consensus 171 lDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~f----------------Pey~-~~~~yI~GESYgG~YvP~ 233 (485)
+|. .|.|.|-+.+.......+-++.++|+..+++..-+.. .++. +.|+||.|||+||..+..
T Consensus 80 ~D~-rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~ 158 (332)
T TIGR01607 80 LDL-QGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALR 158 (332)
T ss_pred ecc-cccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHH
Confidence 996 8999997653211110145677888888887654310 0233 679999999999998887
Q ss_pred HHHHHHHcCCCCceeeeeeeEecccccc
Q 011469 234 LAYTILSKNTSKTIINLKGIAIGNAWID 261 (485)
Q Consensus 234 lA~~I~~~n~~~~~inLkGi~iGNg~id 261 (485)
++....+...-.....++|+++..|++.
T Consensus 159 ~~~~~~~~~~~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 159 LLELLGKSNENNDKLNIKGCISLSGMIS 186 (332)
T ss_pred HHHHhccccccccccccceEEEeccceE
Confidence 7765532210001235899987777764
No 42
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.82 E-value=1.6e-07 Score=93.99 Aligned_cols=136 Identities=19% Similarity=0.198 Sum_probs=92.7
Q ss_pred ceeEeeeEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccc-cc
Q 011469 89 FDQYAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNV-AN 167 (485)
Q Consensus 89 ~~~ysGyv~v~~~~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~-an 167 (485)
.....+|++++ + +++++.|. .+++.|+||.|+|=|=.+=.- | .... ..... ..
T Consensus 20 ~~~~hk~~~~~---g--I~~h~~e~--g~~~gP~illlHGfPe~wysw----------r--~q~~-------~la~~~~r 73 (322)
T KOG4178|consen 20 SAISHKFVTYK---G--IRLHYVEG--GPGDGPIVLLLHGFPESWYSW----------R--HQIP-------GLASRGYR 73 (322)
T ss_pred hhcceeeEEEc---c--EEEEEEee--cCCCCCEEEEEccCCccchhh----------h--hhhh-------hhhhcceE
Confidence 35567888884 2 88999888 789999999999988654431 0 0000 11122 77
Q ss_pred eEEEeCCCCccccccCCC-CCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCc
Q 011469 168 VLFLETPAGVGFSYSNTS-SDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKT 246 (485)
Q Consensus 168 vLflDqPvGvGFSy~~~~-~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~ 246 (485)
++.+|. .|-|+|-.-.. +.| +....+.|+..+|.. +...++++.||+||+..+=.+|....+.- ..
T Consensus 74 viA~Dl-rGyG~Sd~P~~~~~Y---t~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~~Perv--~~ 140 (322)
T KOG4178|consen 74 VIAPDL-RGYGFSDAPPHISEY---TIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALFYPERV--DG 140 (322)
T ss_pred EEecCC-CCCCCCCCCCCccee---eHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHhChhhc--ce
Confidence 999996 89998876544 333 667788887777663 44678999999999999999998877762 22
Q ss_pred eeeeeeeEeccccccccc
Q 011469 247 IINLKGIAIGNAWIDDNL 264 (485)
Q Consensus 247 ~inLkGi~iGNg~id~~~ 264 (485)
.+++.+... ||..++..
T Consensus 141 lv~~nv~~~-~p~~~~~~ 157 (322)
T KOG4178|consen 141 LVTLNVPFP-NPKLKPLD 157 (322)
T ss_pred EEEecCCCC-Ccccchhh
Confidence 333433333 55555544
No 43
>PRK07581 hypothetical protein; Validated
Probab=98.80 E-value=7.2e-07 Score=91.27 Aligned_cols=63 Identities=16% Similarity=0.159 Sum_probs=54.5
Q ss_pred HhhcCcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcC-CCccCCccChHHHH
Q 011469 392 LIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRG-AGHLVPTYQPQRAL 470 (485)
Q Consensus 392 Ll~~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~g-AGHmVP~dqP~~al 470 (485)
|-+-.+||||+.|+.|.++|....+.+.+.+. +.+++.|.+ |||+++.+||+...
T Consensus 271 L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip------------------------~a~l~~i~~~~GH~~~~~~~~~~~ 326 (339)
T PRK07581 271 LGSITAKTFVMPISTDLYFPPEDCEAEAALIP------------------------NAELRPIESIWGHLAGFGQNPADI 326 (339)
T ss_pred HhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC------------------------CCeEEEeCCCCCccccccCcHHHH
Confidence 33346999999999999999998888777654 457899999 99999999999999
Q ss_pred HHHHHHHc
Q 011469 471 IMISSFLE 478 (485)
Q Consensus 471 ~l~~~fl~ 478 (485)
.++++||.
T Consensus 327 ~~~~~~~~ 334 (339)
T PRK07581 327 AFIDAALK 334 (339)
T ss_pred HHHHHHHH
Confidence 99999985
No 44
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.80 E-value=2.4e-07 Score=96.73 Aligned_cols=67 Identities=22% Similarity=0.187 Sum_probs=54.4
Q ss_pred hcCcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEc-CCCccCCccChHHHHHH
Q 011469 394 ASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVR-GAGHLVPTYQPQRALIM 472 (485)
Q Consensus 394 ~~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~-gAGHmVP~dqP~~al~l 472 (485)
+-.+||||+.|+.|.++|....+...+.+.=.+ +..+++.|. ++||+.+.++|++..+.
T Consensus 307 ~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~--------------------~~~~l~~i~~~~GH~~~le~p~~~~~~ 366 (379)
T PRK00175 307 RIKARFLVVSFTSDWLFPPARSREIVDALLAAG--------------------ADVSYAEIDSPYGHDAFLLDDPRYGRL 366 (379)
T ss_pred cCCCCEEEEEECCccccCHHHHHHHHHHHHhcC--------------------CCeEEEEeCCCCCchhHhcCHHHHHHH
Confidence 346899999999999999998887777664000 123678886 99999999999999999
Q ss_pred HHHHHcCC
Q 011469 473 ISSFLEGK 480 (485)
Q Consensus 473 ~~~fl~g~ 480 (485)
+.+||.+.
T Consensus 367 L~~FL~~~ 374 (379)
T PRK00175 367 VRAFLERA 374 (379)
T ss_pred HHHHHHhh
Confidence 99999764
No 45
>PLN02965 Probable pheophorbidase
Probab=98.78 E-value=1.1e-07 Score=93.27 Aligned_cols=60 Identities=5% Similarity=-0.046 Sum_probs=52.7
Q ss_pred cCcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHHH
Q 011469 395 SGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMIS 474 (485)
Q Consensus 395 ~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~~ 474 (485)
..+|+++..|..|.++|....+...+.+. +-+++.+.+|||+++.++|+....++.
T Consensus 192 i~vP~lvi~g~~D~~~~~~~~~~~~~~~~------------------------~a~~~~i~~~GH~~~~e~p~~v~~~l~ 247 (255)
T PLN02965 192 EKVPRVYIKTAKDNLFDPVRQDVMVENWP------------------------PAQTYVLEDSDHSAFFSVPTTLFQYLL 247 (255)
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHhCC------------------------cceEEEecCCCCchhhcCHHHHHHHHH
Confidence 46999999999999999987777776654 457888999999999999999999999
Q ss_pred HHHc
Q 011469 475 SFLE 478 (485)
Q Consensus 475 ~fl~ 478 (485)
+|+.
T Consensus 248 ~~~~ 251 (255)
T PLN02965 248 QAVS 251 (255)
T ss_pred HHHH
Confidence 9975
No 46
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=98.66 E-value=1.4e-06 Score=92.23 Aligned_cols=123 Identities=20% Similarity=0.243 Sum_probs=76.0
Q ss_pred CceEEEEEEecCCCCCCCCeEEEEcCCCChhhhh-hhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccc
Q 011469 103 GRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLG-YGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSY 181 (485)
Q Consensus 103 ~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~-~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy 181 (485)
+..|--|++... ..+..|+|| +.||.++.... +..+.+ +--.+-.+||-+|-| |+|.|-
T Consensus 178 g~~l~g~l~~P~-~~~~~P~Vl-i~gG~~~~~~~~~~~~~~-----------------~La~~Gy~vl~~D~p-G~G~s~ 237 (414)
T PRK05077 178 GGPITGFLHLPK-GDGPFPTVL-VCGGLDSLQTDYYRLFRD-----------------YLAPRGIAMLTIDMP-SVGFSS 237 (414)
T ss_pred CcEEEEEEEECC-CCCCccEEE-EeCCcccchhhhHHHHHH-----------------HHHhCCCEEEEECCC-CCCCCC
Confidence 335655555433 335678887 45666653211 211110 111234889999986 999885
Q ss_pred cCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccc
Q 011469 182 SNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 261 (485)
Q Consensus 182 ~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id 261 (485)
.... . .+ .......+.+|+...|.....++.|+|+|+||.+++.+|..-.+ .++++++.+|.++
T Consensus 238 ~~~~---~--~d---~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~--------ri~a~V~~~~~~~ 301 (414)
T PRK05077 238 KWKL---T--QD---SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP--------RLKAVACLGPVVH 301 (414)
T ss_pred CCCc---c--cc---HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc--------CceEEEEECCccc
Confidence 3211 0 11 22233456677777887777899999999999999998865332 2889888877764
No 47
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.65 E-value=4.8e-07 Score=110.08 Aligned_cols=108 Identities=17% Similarity=0.176 Sum_probs=71.0
Q ss_pred CCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCCC----CCCCCC
Q 011469 117 SSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSS----DYSNPG 192 (485)
Q Consensus 117 ~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~----~~~~~~ 192 (485)
.++.|.||+|||.+|.+.. +-.+.+ ...+..+|+.+|. .|.|.|...... .....+
T Consensus 1368 ~~~~~~vVllHG~~~s~~~-w~~~~~------------------~L~~~~rVi~~Dl-~G~G~S~~~~~~~~~~~~~~~s 1427 (1655)
T PLN02980 1368 NAEGSVVLFLHGFLGTGED-WIPIMK------------------AISGSARCISIDL-PGHGGSKIQNHAKETQTEPTLS 1427 (1655)
T ss_pred CCCCCeEEEECCCCCCHHH-HHHHHH------------------HHhCCCEEEEEcC-CCCCCCCCccccccccccccCC
Confidence 3467899999999888776 433321 1123479999996 688888543210 000013
Q ss_pred ChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccc
Q 011469 193 DNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (485)
Q Consensus 193 d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~ 259 (485)
.+..|+++..++.+ +...+++|.|+|+||..+-.+|.+..+. ++++++.++.
T Consensus 1428 i~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~~--------V~~lVlis~~ 1479 (1655)
T PLN02980 1428 VELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSDK--------IEGAVIISGS 1479 (1655)
T ss_pred HHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChHh--------hCEEEEECCC
Confidence 44566666655542 3446899999999999999988766554 7888876653
No 48
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.63 E-value=8.2e-07 Score=90.93 Aligned_cols=61 Identities=26% Similarity=0.358 Sum_probs=54.3
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMISS 475 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~~~ 475 (485)
+.||+|..|+.|.++|....+...+++. |..+..|.+|||.+..++|+....++..
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~~p------------------------n~~~~~I~~~gH~~h~e~Pe~~~~~i~~ 319 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKKLP------------------------NAELVEIPGAGHLPHLERPEEVAALLRS 319 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhhCC------------------------CceEEEeCCCCcccccCCHHHHHHHHHH
Confidence 3889999999999999997777666653 7899999999999999999999999999
Q ss_pred HHcCC
Q 011469 476 FLEGK 480 (485)
Q Consensus 476 fl~g~ 480 (485)
|+...
T Consensus 320 Fi~~~ 324 (326)
T KOG1454|consen 320 FIARL 324 (326)
T ss_pred HHHHh
Confidence 99753
No 49
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.55 E-value=6.8e-06 Score=84.71 Aligned_cols=65 Identities=20% Similarity=0.145 Sum_probs=51.5
Q ss_pred hcCcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEE-cCCCccCCccChHHHHHH
Q 011469 394 ASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTV-RGAGHLVPTYQPQRALIM 472 (485)
Q Consensus 394 ~~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V-~gAGHmVP~dqP~~al~l 472 (485)
+-.+||||+.|+.|.++|....+...+.+. .. ---.+|+.| .+|||+++.++|+...+.
T Consensus 286 ~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~--~~------------------~~~v~~~~i~~~~GH~~~le~p~~~~~~ 345 (351)
T TIGR01392 286 RIKAPFLVVSITSDWLFPPAESRELAKALP--AA------------------GLRVTYVEIESPYGHDAFLVETDQVEEL 345 (351)
T ss_pred hCCCCEEEEEeCCccccCHHHHHHHHHHHh--hc------------------CCceEEEEeCCCCCcchhhcCHHHHHHH
Confidence 346999999999999999998888877764 00 001244556 589999999999999999
Q ss_pred HHHHHc
Q 011469 473 ISSFLE 478 (485)
Q Consensus 473 ~~~fl~ 478 (485)
+.+||+
T Consensus 346 l~~FL~ 351 (351)
T TIGR01392 346 IRGFLR 351 (351)
T ss_pred HHHHhC
Confidence 999984
No 50
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.50 E-value=1.9e-07 Score=88.21 Aligned_cols=79 Identities=16% Similarity=0.173 Sum_probs=56.9
Q ss_pred cceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCC
Q 011469 166 ANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSK 245 (485)
Q Consensus 166 anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~ 245 (485)
++|+-+|+ .|.|+|...... ....-+.+|+.+.+..++++.+ ..++++.|+||||..+-.+|....+.
T Consensus 1 f~vi~~d~-rG~g~S~~~~~~----~~~~~~~~~~~~~~~~~~~~l~---~~~~~~vG~S~Gg~~~~~~a~~~p~~---- 68 (230)
T PF00561_consen 1 FDVILFDL-RGFGYSSPHWDP----DFPDYTTDDLAADLEALREALG---IKKINLVGHSMGGMLALEYAAQYPER---- 68 (230)
T ss_dssp EEEEEEEC-TTSTTSSSCCGS----GSCTHCHHHHHHHHHHHHHHHT---TSSEEEEEETHHHHHHHHHHHHSGGG----
T ss_pred CEEEEEeC-CCCCCCCCCccC----CcccccHHHHHHHHHHHHHHhC---CCCeEEEEECCChHHHHHHHHHCchh----
Confidence 36889995 799998741001 1334456777777777777664 34599999999999998888776654
Q ss_pred ceeeeeeeEeccccc
Q 011469 246 TIINLKGIAIGNAWI 260 (485)
Q Consensus 246 ~~inLkGi~iGNg~i 260 (485)
++++++.++..
T Consensus 69 ----v~~lvl~~~~~ 79 (230)
T PF00561_consen 69 ----VKKLVLISPPP 79 (230)
T ss_dssp ----EEEEEEESESS
T ss_pred ----hcCcEEEeeec
Confidence 99999887763
No 51
>PLN02511 hydrolase
Probab=98.45 E-value=1.6e-06 Score=90.81 Aligned_cols=116 Identities=18% Similarity=0.172 Sum_probs=72.8
Q ss_pred eEEecCCCCceEEEEEEec--CCCCCCCCeEEEEcCCCChhhhhhh-hhhhcCCeEEcCCCCccccCccCcccccceEEE
Q 011469 95 YLTVDPKAGRALFYYFVES--PQSSSSKPLVLWLNGGPGCSSLGYG-AMEELGPFRVNSDGKTLYRNEYAWNNVANVLFL 171 (485)
Q Consensus 95 yv~v~~~~~~~lFy~f~ea--~~~~~~~PlvLWLnGGPGcSSl~~G-~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLfl 171 (485)
++... .|..+.+.++.. ...+.++|+||.|+|..|+|...|- .+. .....+-.+++-+
T Consensus 75 ~l~~~--DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~-----------------~~~~~~g~~vv~~ 135 (388)
T PLN02511 75 CLRTP--DGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHML-----------------LRARSKGWRVVVF 135 (388)
T ss_pred EEECC--CCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHH-----------------HHHHHCCCEEEEE
Confidence 55553 345565544432 2235678999999999987643221 111 0112355789999
Q ss_pred eCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHH
Q 011469 172 ETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYT 237 (485)
Q Consensus 172 DqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~ 237 (485)
|. .|.|-|-...... .....++|+.+++...-.++| +.++++.|+|+||..+-.++.+
T Consensus 136 d~-rG~G~s~~~~~~~----~~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~~ 193 (388)
T PLN02511 136 NS-RGCADSPVTTPQF----YSASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLGE 193 (388)
T ss_pred ec-CCCCCCCCCCcCE----EcCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHHh
Confidence 96 6888875432221 123457788887776666665 4689999999999976665543
No 52
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.42 E-value=1.5e-05 Score=79.36 Aligned_cols=59 Identities=8% Similarity=-0.094 Sum_probs=49.6
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMISS 475 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~~~ 475 (485)
.+|++++.|..|.++|..-.+++.+.+. +-.++++. +||+++..+|+....+|..
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~------------------------~~~~~~l~-~gH~p~ls~P~~~~~~i~~ 265 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP------------------------PSQVYELE-SDHSPFFSTPFLLFGLLIK 265 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC------------------------ccEEEEEC-CCCCccccCHHHHHHHHHH
Confidence 5899999999999999988888777654 22667785 9999999999999999998
Q ss_pred HHcC
Q 011469 476 FLEG 479 (485)
Q Consensus 476 fl~g 479 (485)
+...
T Consensus 266 ~a~~ 269 (273)
T PLN02211 266 AAAS 269 (273)
T ss_pred HHHH
Confidence 7643
No 53
>PRK10566 esterase; Provisional
Probab=98.39 E-value=1.9e-05 Score=76.65 Aligned_cols=62 Identities=23% Similarity=0.187 Sum_probs=48.2
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMISS 475 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~~~ 475 (485)
..|+|+.+|+.|.++|...++...+.++-.+. ..++++.++.|+||... | ..++-+.+
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~------------------~~~~~~~~~~~~~H~~~---~-~~~~~~~~ 243 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGL------------------DKNLTCLWEPGVRHRIT---P-EALDAGVA 243 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCC------------------CcceEEEecCCCCCccC---H-HHHHHHHH
Confidence 47999999999999999999998888763222 12478999999999974 3 45677777
Q ss_pred HHcC
Q 011469 476 FLEG 479 (485)
Q Consensus 476 fl~g 479 (485)
||..
T Consensus 244 fl~~ 247 (249)
T PRK10566 244 FFRQ 247 (249)
T ss_pred HHHh
Confidence 7754
No 54
>PRK05855 short chain dehydrogenase; Validated
Probab=98.31 E-value=1.6e-05 Score=86.60 Aligned_cols=102 Identities=15% Similarity=0.161 Sum_probs=66.1
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccc
Q 011469 102 AGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSY 181 (485)
Q Consensus 102 ~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy 181 (485)
.|..|.|+-+. +.+.|.||.++|.++.+.. |.-+.+. +.+..+|+.+|. .|.|.|.
T Consensus 11 ~g~~l~~~~~g----~~~~~~ivllHG~~~~~~~-w~~~~~~------------------L~~~~~Vi~~D~-~G~G~S~ 66 (582)
T PRK05855 11 DGVRLAVYEWG----DPDRPTVVLVHGYPDNHEV-WDGVAPL------------------LADRFRVVAYDV-RGAGRSS 66 (582)
T ss_pred CCEEEEEEEcC----CCCCCeEEEEcCCCchHHH-HHHHHHH------------------hhcceEEEEecC-CCCCCCC
Confidence 35677776442 2347899999999766555 4433321 223478999996 6999997
Q ss_pred cCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHH
Q 011469 182 SNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLA 235 (485)
Q Consensus 182 ~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA 235 (485)
...... ..+.++.++|+..++... . ..++++|+|+|+||..+-.++
T Consensus 67 ~~~~~~--~~~~~~~a~dl~~~i~~l---~---~~~~~~lvGhS~Gg~~a~~~a 112 (582)
T PRK05855 67 APKRTA--AYTLARLADDFAAVIDAV---S---PDRPVHLLAHDWGSIQGWEAV 112 (582)
T ss_pred CCCccc--ccCHHHHHHHHHHHHHHh---C---CCCcEEEEecChHHHHHHHHH
Confidence 432211 125567888888877642 1 135699999999996554444
No 55
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.29 E-value=4.3e-05 Score=76.11 Aligned_cols=80 Identities=20% Similarity=0.205 Sum_probs=56.7
Q ss_pred ccceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCC
Q 011469 165 VANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTS 244 (485)
Q Consensus 165 ~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~ 244 (485)
-.+++-+|. .|.|.|.... .+-++..+|+..+++.+.+..|.+ .+++++|+|+||..+-.+|..
T Consensus 57 G~~v~~~Dl-~G~G~S~~~~------~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~------- 120 (274)
T TIGR03100 57 GFPVLRFDY-RGMGDSEGEN------LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAPA------- 120 (274)
T ss_pred CCEEEEeCC-CCCCCCCCCC------CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhhh-------
Confidence 378999997 5999886431 133456788888777666666654 469999999999766555432
Q ss_pred CceeeeeeeEeccccccc
Q 011469 245 KTIINLKGIAIGNAWIDD 262 (485)
Q Consensus 245 ~~~inLkGi~iGNg~id~ 262 (485)
.-.++|+++.||++..
T Consensus 121 --~~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 121 --DLRVAGLVLLNPWVRT 136 (274)
T ss_pred --CCCccEEEEECCccCC
Confidence 1239999999998653
No 56
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.29 E-value=6.6e-05 Score=70.10 Aligned_cols=104 Identities=21% Similarity=0.249 Sum_probs=66.6
Q ss_pred CCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCCCCCCCCCChhhHHH
Q 011469 120 KPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAED 199 (485)
Q Consensus 120 ~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d 199 (485)
.|.+++++|+|+++.. +....+. +..... + .+++.+|+| |.|.|. .. .+ .....+++
T Consensus 21 ~~~i~~~hg~~~~~~~-~~~~~~~-----------~~~~~~---~-~~~~~~d~~-g~g~s~-~~--~~---~~~~~~~~ 77 (282)
T COG0596 21 GPPLVLLHGFPGSSSV-WRPVFKV-----------LPALAA---R-YRVIAPDLR-GHGRSD-PA--GY---SLSAYADD 77 (282)
T ss_pred CCeEEEeCCCCCchhh-hHHHHHH-----------hhcccc---c-eEEEEeccc-CCCCCC-cc--cc---cHHHHHHH
Confidence 6799999999998887 3331110 111111 1 899999998 999997 11 11 11222555
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccc
Q 011469 200 SYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 261 (485)
Q Consensus 200 ~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id 261 (485)
+..|+. .+ ...++++.|+||||..+-.+|.+..+. ++++++.++...
T Consensus 78 ~~~~~~----~~---~~~~~~l~G~S~Gg~~~~~~~~~~p~~--------~~~~v~~~~~~~ 124 (282)
T COG0596 78 LAALLD----AL---GLEKVVLVGHSMGGAVALALALRHPDR--------VRGLVLIGPAPP 124 (282)
T ss_pred HHHHHH----Hh---CCCceEEEEecccHHHHHHHHHhcchh--------hheeeEecCCCC
Confidence 444444 33 334499999999988888787766554 788877776654
No 57
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.28 E-value=8.9e-06 Score=77.48 Aligned_cols=93 Identities=14% Similarity=0.049 Sum_probs=60.2
Q ss_pred ccccceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcC
Q 011469 163 NNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKN 242 (485)
Q Consensus 163 n~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n 242 (485)
.+-..|+.+|..-+.||+..-....... .-....+|+.+.++. +...+.....++.|+|.||||+.+-.++.+-.+
T Consensus 12 ~~Gy~v~~~~~rGs~g~g~~~~~~~~~~-~~~~~~~D~~~~i~~-l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~-- 87 (213)
T PF00326_consen 12 SQGYAVLVPNYRGSGGYGKDFHEAGRGD-WGQADVDDVVAAIEY-LIKQYYIDPDRIGIMGHSYGGYLALLAATQHPD-- 87 (213)
T ss_dssp TTT-EEEEEE-TTSSSSHHHHHHTTTTG-TTHHHHHHHHHHHHH-HHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCC--
T ss_pred hCCEEEEEEcCCCCCccchhHHHhhhcc-ccccchhhHHHHHHH-HhccccccceeEEEEcccccccccchhhcccce--
Confidence 3567899999766666665311111111 223567888885554 444445667899999999999988877763322
Q ss_pred CCCceeeeeeeEecccccccccc
Q 011469 243 TSKTIINLKGIAIGNAWIDDNLC 265 (485)
Q Consensus 243 ~~~~~inLkGi~iGNg~id~~~~ 265 (485)
.+++++.++|++|....
T Consensus 88 ------~f~a~v~~~g~~d~~~~ 104 (213)
T PF00326_consen 88 ------RFKAAVAGAGVSDLFSY 104 (213)
T ss_dssp ------GSSEEEEESE-SSTTCS
T ss_pred ------eeeeeeccceecchhcc
Confidence 37999999999887644
No 58
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.26 E-value=3e-05 Score=78.49 Aligned_cols=138 Identities=18% Similarity=0.199 Sum_probs=91.3
Q ss_pred eeEeeeEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceE
Q 011469 90 DQYAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVL 169 (485)
Q Consensus 90 ~~ysGyv~v~~~~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvL 169 (485)
..-.|+.... .+..++|+.+++.+++. -+|++++|.=.++.- |--+.+ .+. .+-+.|+
T Consensus 8 ~~~~~~~~~~--d~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~r-y~~la~-----------~l~------~~G~~V~ 65 (298)
T COG2267 8 TRTEGYFTGA--DGTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGR-YEELAD-----------DLA------ARGFDVY 65 (298)
T ss_pred ccccceeecC--CCceEEEEeecCCCCCC--cEEEEecCchHHHHH-HHHHHH-----------HHH------hCCCEEE
Confidence 3445555543 46889999998865544 899999998666554 433221 122 1346789
Q ss_pred EEeCCCCccccc-cCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCcee
Q 011469 170 FLETPAGVGFSY-SNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTII 248 (485)
Q Consensus 170 flDqPvGvGFSy-~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~i 248 (485)
=+|+ .|.|.|. .... ... +-.+.-.|+-.|++..-+. ....++||+|||.||-.+...+.... -
T Consensus 66 ~~D~-RGhG~S~r~~rg--~~~-~f~~~~~dl~~~~~~~~~~---~~~~p~~l~gHSmGg~Ia~~~~~~~~--------~ 130 (298)
T COG2267 66 ALDL-RGHGRSPRGQRG--HVD-SFADYVDDLDAFVETIAEP---DPGLPVFLLGHSMGGLIALLYLARYP--------P 130 (298)
T ss_pred EecC-CCCCCCCCCCcC--Cch-hHHHHHHHHHHHHHHHhcc---CCCCCeEEEEeCcHHHHHHHHHHhCC--------c
Confidence 9997 7999997 3321 111 2344555555555544443 34689999999999998877776543 3
Q ss_pred eeeeeEeccccccccc
Q 011469 249 NLKGIAIGNAWIDDNL 264 (485)
Q Consensus 249 nLkGi~iGNg~id~~~ 264 (485)
+++|+++-+|++....
T Consensus 131 ~i~~~vLssP~~~l~~ 146 (298)
T COG2267 131 RIDGLVLSSPALGLGG 146 (298)
T ss_pred cccEEEEECccccCCh
Confidence 4999999999987753
No 59
>PLN02442 S-formylglutathione hydrolase
Probab=98.21 E-value=7.9e-05 Score=74.74 Aligned_cols=54 Identities=17% Similarity=0.062 Sum_probs=36.6
Q ss_pred HHHHHHHHHC-CCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccccc
Q 011469 202 TFLVNWFERF-PQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (485)
Q Consensus 202 ~fL~~f~~~f-Pey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~ 263 (485)
+.|..+++++ +.....+++|+|+|+||+-+-.+|.+-.+. +++++..+|..++.
T Consensus 127 ~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~--------~~~~~~~~~~~~~~ 181 (283)
T PLN02442 127 KELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDK--------YKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchh--------EEEEEEECCccCcc
Confidence 3333344432 334556799999999999777777654333 78888888887753
No 60
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.15 E-value=7.3e-05 Score=78.45 Aligned_cols=71 Identities=17% Similarity=0.122 Sum_probs=57.0
Q ss_pred HHHhhcCcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcC-CCccCCccChHH
Q 011469 390 QQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRG-AGHLVPTYQPQR 468 (485)
Q Consensus 390 ~~Ll~~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~g-AGHmVP~dqP~~ 468 (485)
+.|-.-..||+|+.|+.|.++|....+...+.+.=.+ .+.++..|.+ +||+.+.++|+.
T Consensus 317 ~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~--------------------~~a~l~~I~s~~GH~~~le~p~~ 376 (389)
T PRK06765 317 EALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQG--------------------KYAEVYEIESINGHMAGVFDIHL 376 (389)
T ss_pred HHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcC--------------------CCeEEEEECCCCCcchhhcCHHH
Confidence 3343447999999999999999988877776654100 2468899985 999999999999
Q ss_pred HHHHHHHHHcCC
Q 011469 469 ALIMISSFLEGK 480 (485)
Q Consensus 469 al~l~~~fl~g~ 480 (485)
....+.+||..+
T Consensus 377 ~~~~I~~FL~~~ 388 (389)
T PRK06765 377 FEKKIYEFLNRK 388 (389)
T ss_pred HHHHHHHHHccc
Confidence 999999999764
No 61
>PRK10985 putative hydrolase; Provisional
Probab=98.13 E-value=0.00014 Score=74.29 Aligned_cols=109 Identities=18% Similarity=0.179 Sum_probs=59.5
Q ss_pred CceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhh-hhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccc
Q 011469 103 GRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGA-MEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSY 181 (485)
Q Consensus 103 ~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~-~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy 181 (485)
|..+.+++.+....+.++|+||.++|.+|++...+.. +.+ .+.. +-.+++-+|. .|.|-|-
T Consensus 41 g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~-----------~l~~------~G~~v~~~d~-rG~g~~~ 102 (324)
T PRK10985 41 GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLE-----------AAQK------RGWLGVVMHF-RGCSGEP 102 (324)
T ss_pred CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHH-----------HHHH------CCCEEEEEeC-CCCCCCc
Confidence 4445444444433456789999999999875432210 110 1111 2346777885 6776543
Q ss_pred cCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHH
Q 011469 182 SNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAY 236 (485)
Q Consensus 182 ~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~ 236 (485)
......+. ....+|+..++..-.+++| ..++++.|+|+||..+-.++.
T Consensus 103 ~~~~~~~~----~~~~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~~ 150 (324)
T PRK10985 103 NRLHRIYH----SGETEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLLA 150 (324)
T ss_pred cCCcceEC----CCchHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHHH
Confidence 22112111 1124565554433233444 468999999999986555444
No 62
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.02 E-value=0.00021 Score=71.12 Aligned_cols=129 Identities=22% Similarity=0.194 Sum_probs=85.7
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccc
Q 011469 102 AGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSY 181 (485)
Q Consensus 102 ~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy 181 (485)
.|..||.-......+++.+-+|+.++|.=+-||..| ++.-. .|..+ -.-|-.+|+ .|.|+|-
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~---~~~a~--------~l~~~------g~~v~a~D~-~GhG~Sd 97 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRY---QSTAK--------RLAKS------GFAVYAIDY-EGHGRSD 97 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhhH---HHHHH--------HHHhC------CCeEEEeec-cCCCcCC
Confidence 467888865555445577789999998655554322 21100 12212 234778998 7999997
Q ss_pred cCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccc
Q 011469 182 SNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (485)
Q Consensus 182 ~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~i 260 (485)
+- ..|. .+-+...+|...|+..+..+- |+++.+.|++|||+||-.+-.++.+ + +--..|+++..|+.
T Consensus 98 Gl--~~yi-~~~d~~v~D~~~~~~~i~~~~-e~~~lp~FL~GeSMGGAV~Ll~~~k---~-----p~~w~G~ilvaPmc 164 (313)
T KOG1455|consen 98 GL--HAYV-PSFDLVVDDVISFFDSIKERE-ENKGLPRFLFGESMGGAVALLIALK---D-----PNFWDGAILVAPMC 164 (313)
T ss_pred CC--cccC-CcHHHHHHHHHHHHHHHhhcc-ccCCCCeeeeecCcchHHHHHHHhh---C-----Ccccccceeeeccc
Confidence 43 3454 377889999888888766554 7999999999999999876666654 1 22267777766654
No 63
>PLN02872 triacylglycerol lipase
Probab=97.91 E-value=0.00025 Score=74.53 Aligned_cols=61 Identities=20% Similarity=0.305 Sum_probs=50.7
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccC---CccChHHHHHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLV---PTYQPQRALIM 472 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmV---P~dqP~~al~l 472 (485)
.++|+|+.|+.|.+++....+...+.|.= ...+..+.++||+. ..+.|+..++.
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~-----------------------~~~l~~l~~~gH~dfi~~~eape~V~~~ 381 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELPS-----------------------KPELLYLENYGHIDFLLSTSAKEDVYNH 381 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCCC-----------------------ccEEEEcCCCCCHHHHhCcchHHHHHHH
Confidence 58999999999999999999999988761 02467789999963 45899999999
Q ss_pred HHHHHcC
Q 011469 473 ISSFLEG 479 (485)
Q Consensus 473 ~~~fl~g 479 (485)
+.+|+..
T Consensus 382 Il~fL~~ 388 (395)
T PLN02872 382 MIQFFRS 388 (395)
T ss_pred HHHHHHH
Confidence 9999864
No 64
>PRK10115 protease 2; Provisional
Probab=97.85 E-value=0.00038 Score=78.34 Aligned_cols=140 Identities=14% Similarity=0.095 Sum_probs=83.5
Q ss_pred EEecCCCCceEEEEEEecCC--CCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeC
Q 011469 96 LTVDPKAGRALFYYFVESPQ--SSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLET 173 (485)
Q Consensus 96 v~v~~~~~~~lFy~f~ea~~--~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDq 173 (485)
|.+....|..+-.|++..+. ...+.|+||+.+||||.+... +...+ -.+|...-=++.+=.
T Consensus 419 v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p-~f~~~----------------~~~l~~rG~~v~~~n 481 (686)
T PRK10115 419 LWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDA-DFSFS----------------RLSLLDRGFVYAIVH 481 (686)
T ss_pred EEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC-CccHH----------------HHHHHHCCcEEEEEE
Confidence 44444556777776665332 235669999999999988652 22111 123444433333333
Q ss_pred CCCcc-cc--ccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeee
Q 011469 174 PAGVG-FS--YSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINL 250 (485)
Q Consensus 174 PvGvG-FS--y~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inL 250 (485)
+.|-| |. +.+... .. .-...-+|+..... |+....--...++.|.|-||||..+-..+.+-.+. +
T Consensus 482 ~RGs~g~G~~w~~~g~-~~--~k~~~~~D~~a~~~-~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdl--------f 549 (686)
T PRK10115 482 VRGGGELGQQWYEDGK-FL--KKKNTFNDYLDACD-ALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPEL--------F 549 (686)
T ss_pred cCCCCccCHHHHHhhh-hh--cCCCcHHHHHHHHH-HHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhh--------e
Confidence 67642 22 112111 00 11246778877554 45444334557899999999999776666544443 9
Q ss_pred eeeEeccccccccc
Q 011469 251 KGIAIGNAWIDDNL 264 (485)
Q Consensus 251 kGi~iGNg~id~~~ 264 (485)
++++.+.|++|...
T Consensus 550 ~A~v~~vp~~D~~~ 563 (686)
T PRK10115 550 HGVIAQVPFVDVVT 563 (686)
T ss_pred eEEEecCCchhHhh
Confidence 99999999998753
No 65
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.84 E-value=4e-05 Score=79.06 Aligned_cols=132 Identities=19% Similarity=0.317 Sum_probs=79.8
Q ss_pred EEEEEEecCC--CCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccC
Q 011469 106 LFYYFVESPQ--SSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSN 183 (485)
Q Consensus 106 lFy~f~ea~~--~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~ 183 (485)
-.||++++++ +|++||+||+++|| |.+.+.=|+.+- ...+-|..-+...||.+|=..-. | ..
T Consensus 106 ~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~-----~L~~i~~~l~~~SILvLDYsLt~--~-~~ 169 (374)
T PF10340_consen 106 QSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIE-----FLLNIYKLLPEVSILVLDYSLTS--S-DE 169 (374)
T ss_pred ceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHH-----HHHHHHHHcCCCeEEEEeccccc--c-cc
Confidence 4799999753 68889999999999 444444454331 11122222234489999932111 0 00
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccccc
Q 011469 184 TSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (485)
Q Consensus 184 ~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~ 263 (485)
....|+ . ...++.+..+...+. -...++.|.|+|-||+.+-.+.+++.+.+ .... =|+.++..||+++.
T Consensus 170 ~~~~yP--t---QL~qlv~~Y~~Lv~~---~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~--~~~~-Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 170 HGHKYP--T---QLRQLVATYDYLVES---EGNKNIILMGDSAGGNLALSFLQYLKKPN--KLPY-PKSAILISPWVNLV 238 (374)
T ss_pred CCCcCc--h---HHHHHHHHHHHHHhc---cCCCeEEEEecCccHHHHHHHHHHHhhcC--CCCC-CceeEEECCCcCCc
Confidence 122333 1 223333333333322 23568999999999999999999987654 1122 26888999999986
Q ss_pred c
Q 011469 264 L 264 (485)
Q Consensus 264 ~ 264 (485)
.
T Consensus 239 ~ 239 (374)
T PF10340_consen 239 P 239 (374)
T ss_pred C
Confidence 3
No 66
>PRK11460 putative hydrolase; Provisional
Probab=97.77 E-value=0.00078 Score=65.52 Aligned_cols=62 Identities=19% Similarity=0.139 Sum_probs=48.4
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMISS 475 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~~~ 475 (485)
..+|++.+|+.|.++|+..++...+.|+=.+ ...++..+.++||.+..+.-+.+.+.|++
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g--------------------~~~~~~~~~~~gH~i~~~~~~~~~~~l~~ 207 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLG--------------------GDVTLDIVEDLGHAIDPRLMQFALDRLRY 207 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCC--------------------CCeEEEEECCCCCCCCHHHHHHHHHHHHH
Confidence 4799999999999999999998888876111 14678889999999986666666666665
Q ss_pred HH
Q 011469 476 FL 477 (485)
Q Consensus 476 fl 477 (485)
++
T Consensus 208 ~l 209 (232)
T PRK11460 208 TV 209 (232)
T ss_pred Hc
Confidence 55
No 67
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.53 E-value=0.00039 Score=66.36 Aligned_cols=116 Identities=17% Similarity=0.149 Sum_probs=61.4
Q ss_pred CCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCCCC-CCC---CC
Q 011469 117 SSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSD-YSN---PG 192 (485)
Q Consensus 117 ~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~-~~~---~~ 192 (485)
.+..|+||+|+|+++..+. +.... + + . .+. + ..-+.||..|.| |.|.+.. .-+ +.. ..
T Consensus 10 ~~~~P~vv~lHG~~~~~~~-~~~~~--~-~--~----~~a-~----~~g~~Vv~Pd~~-g~~~~~~--~~~~~~~~~~~~ 71 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASA-YVIDW--G-W--K----AAA-D----RYGFVLVAPEQT-SYNSSNN--CWDWFFTHHRAR 71 (212)
T ss_pred CCCCCEEEEeCCCCCCHHH-Hhhhc--C-h--H----HHH-H----hCCeEEEecCCc-CccccCC--CCCCCCccccCC
Confidence 3568999999999876554 21000 0 0 0 000 0 123577888864 4332211 000 000 01
Q ss_pred ChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccc
Q 011469 193 DNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (485)
Q Consensus 193 d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~ 259 (485)
......|+.+++....++++ ....+++|+|+|.||..+-.+|..-.+. ++++++..|.
T Consensus 72 ~~~~~~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~~p~~--------~~~~~~~~g~ 129 (212)
T TIGR01840 72 GTGEVESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCTYPDV--------FAGGASNAGL 129 (212)
T ss_pred CCccHHHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHhCchh--------heEEEeecCC
Confidence 11234445554444444442 4556899999999999877777653332 6777665554
No 68
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.38 E-value=0.00081 Score=66.97 Aligned_cols=126 Identities=12% Similarity=0.059 Sum_probs=79.8
Q ss_pred CceEEEEEEecCCCCCCCCeEEEEcCCCC---hhhhhhhhhhhcCCeEEcCCCCccccCccCcc-cccceEEEeCCCCcc
Q 011469 103 GRALFYYFVESPQSSSSKPLVLWLNGGPG---CSSLGYGAMEELGPFRVNSDGKTLYRNEYAWN-NVANVLFLETPAGVG 178 (485)
Q Consensus 103 ~~~lFy~f~ea~~~~~~~PlvLWLnGGPG---cSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn-~~anvLflDqPvGvG 178 (485)
...+|.|+++.... ..+|+||.++|-.+ ++.-.+..+. ..+. +-.+|+-+|. .|.|
T Consensus 9 ~g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~~~~la------------------~~La~~Gy~Vl~~Dl-~G~G 68 (266)
T TIGR03101 9 HGFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRMVALQA------------------RAFAAGGFGVLQIDL-YGCG 68 (266)
T ss_pred CCcEEEEEecCCCC-CCceEEEEECCCcccccchhHHHHHHH------------------HHHHHCCCEEEEECC-CCCC
Confidence 45688888876532 34799999998532 1111010000 1222 3478999996 6888
Q ss_pred ccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccc
Q 011469 179 FSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNA 258 (485)
Q Consensus 179 FSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg 258 (485)
.|-.... + .+.+...+|+..+ .+|++... ..+++|.|+|+||..+..+|.+..+ .++++++-+|
T Consensus 69 ~S~g~~~-~---~~~~~~~~Dv~~a-i~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~--------~v~~lVL~~P 132 (266)
T TIGR03101 69 DSAGDFA-A---ARWDVWKEDVAAA-YRWLIEQG---HPPVTLWGLRLGALLALDAANPLAA--------KCNRLVLWQP 132 (266)
T ss_pred CCCCccc-c---CCHHHHHHHHHHH-HHHHHhcC---CCCEEEEEECHHHHHHHHHHHhCcc--------ccceEEEecc
Confidence 8854322 1 1334556776654 44665542 4689999999999999888765433 3888999888
Q ss_pred cccccc
Q 011469 259 WIDDNL 264 (485)
Q Consensus 259 ~id~~~ 264 (485)
.++...
T Consensus 133 ~~~g~~ 138 (266)
T TIGR03101 133 VVSGKQ 138 (266)
T ss_pred ccchHH
Confidence 877553
No 69
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.36 E-value=0.0028 Score=63.11 Aligned_cols=53 Identities=21% Similarity=0.202 Sum_probs=37.7
Q ss_pred HHHHHHHHHH-CCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccccc
Q 011469 201 YTFLVNWFER-FPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (485)
Q Consensus 201 ~~fL~~f~~~-fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~ 262 (485)
.+.|..++++ ++ ....+++|+|+|+||+.+-.+|.+-.+. +++++..+|+.++
T Consensus 122 ~~~l~~~~~~~~~-~~~~~~~~~G~S~GG~~a~~~a~~~p~~--------~~~~~~~~~~~~~ 175 (275)
T TIGR02821 122 VQELPALVAAQFP-LDGERQGITGHSMGGHGALVIALKNPDR--------FKSVSAFAPIVAP 175 (275)
T ss_pred HHHHHHHHHhhCC-CCCCceEEEEEChhHHHHHHHHHhCccc--------ceEEEEECCccCc
Confidence 3444555554 43 5556899999999999887777654333 7888888888765
No 70
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=97.33 E-value=0.00093 Score=64.02 Aligned_cols=59 Identities=27% Similarity=0.363 Sum_probs=42.2
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMISS 475 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~~~ 475 (485)
+++|++.+|+.|.++|....+...+.|+=.+ .+++|.++.|.||.++ .+.+..+.+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~--------------------~~v~~~~~~g~gH~i~----~~~~~~~~~ 210 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAG--------------------ANVEFHEYPGGGHEIS----PEELRDLRE 210 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT---------------------GEEEEEETT-SSS------HHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcC--------------------CCEEEEEcCCCCCCCC----HHHHHHHHH
Confidence 4899999999999999998888877765111 1579999999999996 456666777
Q ss_pred HHc
Q 011469 476 FLE 478 (485)
Q Consensus 476 fl~ 478 (485)
||.
T Consensus 211 ~l~ 213 (216)
T PF02230_consen 211 FLE 213 (216)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
No 71
>PRK11071 esterase YqiA; Provisional
Probab=97.29 E-value=0.002 Score=60.76 Aligned_cols=54 Identities=19% Similarity=0.158 Sum_probs=45.0
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMISS 475 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~~~ 475 (485)
..+|+|.+|+.|-++|+..+.+..++. ..+.++||+|.-. ..+..+..+..
T Consensus 136 ~~~v~iihg~~De~V~~~~a~~~~~~~---------------------------~~~~~~ggdH~f~--~~~~~~~~i~~ 186 (190)
T PRK11071 136 PDLIWLLQQTGDEVLDYRQAVAYYAAC---------------------------RQTVEEGGNHAFV--GFERYFNQIVD 186 (190)
T ss_pred hhhEEEEEeCCCCcCCHHHHHHHHHhc---------------------------ceEEECCCCcchh--hHHHhHHHHHH
Confidence 478999999999999999988877642 3568899999983 34899999999
Q ss_pred HHc
Q 011469 476 FLE 478 (485)
Q Consensus 476 fl~ 478 (485)
|+.
T Consensus 187 fl~ 189 (190)
T PRK11071 187 FLG 189 (190)
T ss_pred Hhc
Confidence 974
No 72
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=97.28 E-value=0.0047 Score=70.30 Aligned_cols=100 Identities=22% Similarity=0.351 Sum_probs=68.6
Q ss_pred CccCcccccceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCC--------------CCCCCCeEEEe
Q 011469 158 NEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFP--------------QYKNRDFFITG 223 (485)
Q Consensus 158 N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP--------------ey~~~~~yI~G 223 (485)
+.|=-.+-++|+++| .+|+|-|-+.-.. ...+..+|.++ +.+|+...+ .+-+-++-++|
T Consensus 272 ~~~~~~rGYaVV~~D-~RGtg~SeG~~~~-----~~~~E~~D~~~-vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G 344 (767)
T PRK05371 272 NDYFLPRGFAVVYVS-GIGTRGSDGCPTT-----GDYQEIESMKA-VIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTG 344 (767)
T ss_pred HHHHHhCCeEEEEEc-CCCCCCCCCcCcc-----CCHHHHHHHHH-HHHHHhhCCccccccccccccccCCCCCeeEEEE
Confidence 444445678999999 5999999876322 33455667766 556887432 12356899999
Q ss_pred ccccccchHHHHHHHHHcCCCCceeeeeeeEecccccccccccchhhHHHhhccCC
Q 011469 224 ESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALN 279 (485)
Q Consensus 224 ESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~~~~~~~~~~~~~~gli 279 (485)
.||+|...-.+|..-.. .||.|+...|+.+ +++|++..|++
T Consensus 345 ~SY~G~~~~~aAa~~pp--------~LkAIVp~a~is~-------~yd~yr~~G~~ 385 (767)
T PRK05371 345 KSYLGTLPNAVATTGVE--------GLETIIPEAAISS-------WYDYYRENGLV 385 (767)
T ss_pred EcHHHHHHHHHHhhCCC--------cceEEEeeCCCCc-------HHHHhhcCCce
Confidence 99999988877765433 3999998777755 34555566654
No 73
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=97.27 E-value=0.0025 Score=55.87 Aligned_cols=42 Identities=31% Similarity=0.383 Sum_probs=34.4
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCcc
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHL 460 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHm 460 (485)
.+||++..|+.|.++|....+...++++ . .-++..|.|++|+
T Consensus 104 ~~pv~~i~g~~D~~~~~~~~~~~~~~~~-~----------------------~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 104 RIPVLFIHGENDPLVPPEQVRRLYEALP-G----------------------PKELYIIPGAGHF 145 (145)
T ss_dssp TSEEEEEEETT-SSSHHHHHHHHHHHHC-S----------------------SEEEEEETTS-TT
T ss_pred CCcEEEEEECCCCcCCHHHHHHHHHHcC-C----------------------CcEEEEeCCCcCc
Confidence 4699999999999999999999988877 1 2378999999996
No 74
>PRK13604 luxD acyl transferase; Provisional
Probab=97.26 E-value=0.014 Score=59.12 Aligned_cols=125 Identities=14% Similarity=0.141 Sum_probs=74.9
Q ss_pred CCceEEEEEEecC-CCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCcccc
Q 011469 102 AGRALFYYFVESP-QSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFS 180 (485)
Q Consensus 102 ~~~~lFy~f~ea~-~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFS 180 (485)
.|..|.=|+.... ++++..|+||..+| .|+....|- ..-.+=+.+-.|+|=.|.=.|+|-|
T Consensus 18 dG~~L~Gwl~~P~~~~~~~~~~vIi~HG-f~~~~~~~~-----------------~~A~~La~~G~~vLrfD~rg~~GeS 79 (307)
T PRK13604 18 NGQSIRVWETLPKENSPKKNNTILIASG-FARRMDHFA-----------------GLAEYLSSNGFHVIRYDSLHHVGLS 79 (307)
T ss_pred CCCEEEEEEEcCcccCCCCCCEEEEeCC-CCCChHHHH-----------------HHHHHHHHCCCEEEEecCCCCCCCC
Confidence 4677877877775 34566687777655 666532111 1122334567899999963345888
Q ss_pred ccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccc
Q 011469 181 YSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (485)
Q Consensus 181 y~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~i 260 (485)
-++- .+. +......|+.. ..+|+++.. ..+++|.|+|.||.-+...|. ..+++++++..|+.
T Consensus 80 ~G~~-~~~---t~s~g~~Dl~a-aid~lk~~~---~~~I~LiG~SmGgava~~~A~----------~~~v~~lI~~sp~~ 141 (307)
T PRK13604 80 SGTI-DEF---TMSIGKNSLLT-VVDWLNTRG---INNLGLIAASLSARIAYEVIN----------EIDLSFLITAVGVV 141 (307)
T ss_pred CCcc-ccC---cccccHHHHHH-HHHHHHhcC---CCceEEEEECHHHHHHHHHhc----------CCCCCEEEEcCCcc
Confidence 4432 122 21223456544 444555541 357999999999987543432 12388899988887
Q ss_pred cc
Q 011469 261 DD 262 (485)
Q Consensus 261 d~ 262 (485)
+-
T Consensus 142 ~l 143 (307)
T PRK13604 142 NL 143 (307)
T ss_pred cH
Confidence 63
No 75
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.22 E-value=0.0014 Score=64.52 Aligned_cols=108 Identities=22% Similarity=0.375 Sum_probs=77.1
Q ss_pred CCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCCCCCCCCCChhh
Q 011469 117 SSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNT 196 (485)
Q Consensus 117 ~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~ 196 (485)
...-|+++.++|| |.|.|.+..|.- .+..+ -..-++-+| ..|.|-|-..+..++ +-+..
T Consensus 71 ~t~gpil~l~HG~-G~S~LSfA~~a~-----------el~s~-----~~~r~~a~D-lRgHGeTk~~~e~dl---S~eT~ 129 (343)
T KOG2564|consen 71 ATEGPILLLLHGG-GSSALSFAIFAS-----------ELKSK-----IRCRCLALD-LRGHGETKVENEDDL---SLETM 129 (343)
T ss_pred CCCccEEEEeecC-cccchhHHHHHH-----------HHHhh-----cceeEEEee-ccccCccccCChhhc---CHHHH
Confidence 3566999999998 999987666651 11111 112248899 799999998877765 56778
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEec
Q 011469 197 AEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIG 256 (485)
Q Consensus 197 A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iG 256 (485)
++|+...++++|..-| -+++|.|||+||-.+-+.|..= ..-+|.|+.+.
T Consensus 130 ~KD~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~k-------~lpsl~Gl~vi 178 (343)
T KOG2564|consen 130 SKDFGAVIKELFGELP----PQIILVGHSMGGAIAVHTAASK-------TLPSLAGLVVI 178 (343)
T ss_pred HHHHHHHHHHHhccCC----CceEEEeccccchhhhhhhhhh-------hchhhhceEEE
Confidence 9999999998885443 2699999999999886655421 12348888774
No 76
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.19 E-value=0.017 Score=58.41 Aligned_cols=60 Identities=25% Similarity=0.212 Sum_probs=49.1
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMISS 475 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~~~ 475 (485)
..+|++..|-.+.-+|..-.....+.. .+..+..+++|||+|..|+|+...+++..
T Consensus 253 ~~pvlfi~g~~S~fv~~~~~~~~~~~f------------------------p~~e~~~ld~aGHwVh~E~P~~~~~~i~~ 308 (315)
T KOG2382|consen 253 TGPVLFIKGLQSKFVPDEHYPRMEKIF------------------------PNVEVHELDEAGHWVHLEKPEEFIESISE 308 (315)
T ss_pred ccceeEEecCCCCCcChhHHHHHHHhc------------------------cchheeecccCCceeecCCHHHHHHHHHH
Confidence 589999999999988877555544442 24577888999999999999999999999
Q ss_pred HHcC
Q 011469 476 FLEG 479 (485)
Q Consensus 476 fl~g 479 (485)
|+..
T Consensus 309 Fl~~ 312 (315)
T KOG2382|consen 309 FLEE 312 (315)
T ss_pred Hhcc
Confidence 9864
No 77
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.16 E-value=0.02 Score=62.39 Aligned_cols=85 Identities=8% Similarity=-0.015 Sum_probs=52.1
Q ss_pred ccceEEEeCCCCccccccCCCCCCCCCCChhhH-HHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCC
Q 011469 165 VANVLFLETPAGVGFSYSNTSSDYSNPGDNNTA-EDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNT 243 (485)
Q Consensus 165 ~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A-~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~ 243 (485)
-..|+-|| -.|.|.|.... +.++.+ +++.++|....+.. ...++++.|+|.||..+...+..+....
T Consensus 220 Gf~V~~iD-wrgpg~s~~~~-------~~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~~- 287 (532)
T TIGR01838 220 GHTVFVIS-WRNPDASQADK-------TFDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAARG- 287 (532)
T ss_pred CcEEEEEE-CCCCCcccccC-------ChhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHhC-
Confidence 46788899 47888774331 222333 44666666655544 4678999999999998755322222210
Q ss_pred CCceeeeeeeEecccccccc
Q 011469 244 SKTIINLKGIAIGNAWIDDN 263 (485)
Q Consensus 244 ~~~~inLkGi~iGNg~id~~ 263 (485)
..-.++++++.+..+|..
T Consensus 288 --~~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 288 --DDKRIKSATFFTTLLDFS 305 (532)
T ss_pred --CCCccceEEEEecCcCCC
Confidence 012378888887777764
No 78
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=97.00 E-value=0.031 Score=57.57 Aligned_cols=62 Identities=13% Similarity=0.115 Sum_probs=47.7
Q ss_pred cCcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccCh---HHHHH
Q 011469 395 SGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQP---QRALI 471 (485)
Q Consensus 395 ~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP---~~al~ 471 (485)
-..+|++++|+.|.++|...++.+.+.+.= ...++..+. +||+.+...| +.+..
T Consensus 285 i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~----------------------~~~~~~~~~-~gH~~~~~~~~~~~~v~~ 341 (350)
T TIGR01836 285 IKMPILNIYAERDHLVPPDASKALNDLVSS----------------------EDYTELSFP-GGHIGIYVSGKAQKEVPP 341 (350)
T ss_pred CCCCeEEEecCCCCcCCHHHHHHHHHHcCC----------------------CCeEEEEcC-CCCEEEEECchhHhhhhH
Confidence 368999999999999999999988887651 123555554 8999998866 56667
Q ss_pred HHHHHHcC
Q 011469 472 MISSFLEG 479 (485)
Q Consensus 472 l~~~fl~g 479 (485)
-+.+||..
T Consensus 342 ~i~~wl~~ 349 (350)
T TIGR01836 342 AIGKWLQA 349 (350)
T ss_pred HHHHHHHh
Confidence 77777753
No 79
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.97 E-value=0.032 Score=56.23 Aligned_cols=69 Identities=26% Similarity=0.359 Sum_probs=54.9
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCC--ccChHHHHHHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVP--TYQPQRALIMI 473 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP--~dqP~~al~l~ 473 (485)
..||+||+|..|.++|+..++..++++-=.|. .+++|.++.+++|+.. ...| .++.-|
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~-------------------a~V~~~~~~~~~H~~~~~~~~~-~a~~Wl 278 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGG-------------------ADVEYVRYPGGGHLGAAFASAP-DALAWL 278 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCC-------------------CCEEEEecCCCChhhhhhcCcH-HHHHHH
Confidence 68999999999999999999999988653220 2689999999999975 4565 566777
Q ss_pred HHHHcCCCCCC
Q 011469 474 SSFLEGKLPPS 484 (485)
Q Consensus 474 ~~fl~g~~~p~ 484 (485)
.+-+.|++.++
T Consensus 279 ~~rf~G~~~~~ 289 (290)
T PF03583_consen 279 DDRFAGKPATS 289 (290)
T ss_pred HHHHCCCCCCC
Confidence 77788888764
No 80
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.88 E-value=0.01 Score=67.50 Aligned_cols=144 Identities=22% Similarity=0.179 Sum_probs=79.6
Q ss_pred EeeeEEecCCCCceEEEEEEecCC--CCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCccc-ccce
Q 011469 92 YAGYLTVDPKAGRALFYYFVESPQ--SSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNN-VANV 168 (485)
Q Consensus 92 ysGyv~v~~~~~~~lFy~f~ea~~--~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~-~anv 168 (485)
.-+-+.+ .|-.+++++.-.+. +.++-||+++..||||.-+.. +. + .+..|.+.+.+ -+=|
T Consensus 499 ~~~~i~~---~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~-~~------~-------~~~~~~~~~s~~g~~v 561 (755)
T KOG2100|consen 499 EFGKIEI---DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVT-SK------F-------SVDWNEVVVSSRGFAV 561 (755)
T ss_pred eeEEEEe---ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceee-ee------E-------EecHHHHhhccCCeEE
Confidence 3444444 24556677666543 335679999999999932221 11 1 12223333322 2668
Q ss_pred EEEeCCCCccccccCC-CCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCce
Q 011469 169 LFLETPAGVGFSYSNT-SSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTI 247 (485)
Q Consensus 169 LflDqPvGvGFSy~~~-~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~ 247 (485)
+-|| +.|+|+.=-.- ...+...++. -.+|.....+.+.+.+ -.-..++.|+|.||||.. +..++.+. +.
T Consensus 562 ~~vd-~RGs~~~G~~~~~~~~~~lG~~-ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy~----t~~~l~~~---~~ 631 (755)
T KOG2100|consen 562 LQVD-GRGSGGYGWDFRSALPRNLGDV-EVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGYL----TLKLLESD---PG 631 (755)
T ss_pred EEEc-CCCcCCcchhHHHHhhhhcCCc-chHHHHHHHHHHHhcc-cccHHHeEEeccChHHHH----HHHHhhhC---cC
Confidence 8999 79998763221 1111112322 3567777666666665 344557999999999974 33444331 11
Q ss_pred eeeeeeEeccccccc
Q 011469 248 INLKGIAIGNAWIDD 262 (485)
Q Consensus 248 inLkGi~iGNg~id~ 262 (485)
--+|.-+..+|++|-
T Consensus 632 ~~fkcgvavaPVtd~ 646 (755)
T KOG2100|consen 632 DVFKCGVAVAPVTDW 646 (755)
T ss_pred ceEEEEEEecceeee
Confidence 224544555666554
No 81
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.87 E-value=0.00086 Score=67.07 Aligned_cols=113 Identities=15% Similarity=0.180 Sum_probs=67.8
Q ss_pred CCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCCCCCCCCCChhhH
Q 011469 118 SSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTA 197 (485)
Q Consensus 118 ~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A 197 (485)
.++|++|+++|-.|.....+ +. .+ .+.+.-....|||.+|-+.+..-.|.... .+....+
T Consensus 34 ~~~p~vilIHG~~~~~~~~~--~~------------~l-~~~ll~~~~~nVi~vD~~~~~~~~y~~a~-----~~~~~v~ 93 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESW--IS------------DL-RKAYLSRGDYNVIVVDWGRGANPNYPQAV-----NNTRVVG 93 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcH--HH------------HH-HHHHHhcCCCEEEEEECccccccChHHHH-----HhHHHHH
Confidence 56799999999766441110 00 00 01111124589999997643111121100 1334566
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccc
Q 011469 198 EDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (485)
Q Consensus 198 ~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~ 259 (485)
+++-.+|....+.. .....+++|.|+|+|||.+-.+|.+..+ +++.|+..+|.
T Consensus 94 ~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~--------~v~~iv~LDPa 146 (275)
T cd00707 94 AELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG--------KLGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC--------ccceeEEecCC
Confidence 77777666655543 2445689999999999999999887643 38888886654
No 82
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.79 E-value=0.011 Score=58.86 Aligned_cols=126 Identities=18% Similarity=0.276 Sum_probs=75.1
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccc-----eEEEeC---
Q 011469 102 AGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVAN-----VLFLET--- 173 (485)
Q Consensus 102 ~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~an-----vLflDq--- 173 (485)
++.+.-||++.-..-++.+||||.|+|+=|...- + .+-..|++.|. |+|-|+
T Consensus 43 ~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag-~-------------------~~~sg~d~lAd~~gFlV~yPdg~~~ 102 (312)
T COG3509 43 NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAG-Q-------------------LHGTGWDALADREGFLVAYPDGYDR 102 (312)
T ss_pred CCCccceEEEcCCCCCCCCCEEEEEecCCCChHH-h-------------------hcccchhhhhcccCcEEECcCcccc
Confidence 3566678888877777888999999998554332 1 12234554433 444432
Q ss_pred ---CCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeee
Q 011469 174 ---PAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINL 250 (485)
Q Consensus 174 ---PvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inL 250 (485)
|-|.|-+|..... . .+.+.+..+.+.+..-..+| ......+||+|-|-||.++-.|+..-.+. +
T Consensus 103 ~wn~~~~~~~~~p~~~--~--~g~ddVgflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~~p~~--------f 169 (312)
T COG3509 103 AWNANGCGNWFGPADR--R--RGVDDVGFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACEYPDI--------F 169 (312)
T ss_pred ccCCCcccccCCcccc--c--CCccHHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhcCccc--------c
Confidence 4455555432211 0 11122333333333333444 35567999999999999888888665443 7
Q ss_pred eeeEeccccc
Q 011469 251 KGIAIGNAWI 260 (485)
Q Consensus 251 kGi~iGNg~i 260 (485)
.+|++..|..
T Consensus 170 aa~A~VAg~~ 179 (312)
T COG3509 170 AAIAPVAGLL 179 (312)
T ss_pred cceeeeeccc
Confidence 8888877776
No 83
>COG0400 Predicted esterase [General function prediction only]
Probab=96.51 E-value=0.036 Score=53.13 Aligned_cols=116 Identities=19% Similarity=0.226 Sum_probs=62.6
Q ss_pred EEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCC
Q 011469 106 LFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTS 185 (485)
Q Consensus 106 lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~ 185 (485)
.|+..+++. ....+|+||||+|= |.+...+ .+ =|-.+.++..-+..|- .+. ..+....|+.....
T Consensus 5 ~~~~~i~~~-~~p~~~~iilLHG~-Ggde~~~---~~-~~~~~~P~~~~is~rG-------~v~--~~g~~~~f~~~~~~ 69 (207)
T COG0400 5 PFIPRIEKP-GDPAAPLLILLHGL-GGDELDL---VP-LPELILPNATLVSPRG-------PVA--ENGGPRFFRRYDEG 69 (207)
T ss_pred cccccccCC-CCCCCcEEEEEecC-CCChhhh---hh-hhhhcCCCCeEEcCCC-------Ccc--ccCcccceeecCCC
Confidence 444545554 34567899999982 4344331 11 1112233221111111 111 22344455554433
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHH
Q 011469 186 SDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTI 238 (485)
Q Consensus 186 ~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I 238 (485)
. +...+....++.+.+||....+++ .....++++.|-|=|+.++-.+..+.
T Consensus 70 ~-~d~edl~~~~~~~~~~l~~~~~~~-gi~~~~ii~~GfSqGA~ial~~~l~~ 120 (207)
T COG0400 70 S-FDQEDLDLETEKLAEFLEELAEEY-GIDSSRIILIGFSQGANIALSLGLTL 120 (207)
T ss_pred c-cchhhHHHHHHHHHHHHHHHHHHh-CCChhheEEEecChHHHHHHHHHHhC
Confidence 2 111134456667778888888777 35567999999999999776666543
No 84
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=96.48 E-value=0.0088 Score=63.61 Aligned_cols=81 Identities=17% Similarity=0.092 Sum_probs=52.8
Q ss_pred ccceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCC
Q 011469 165 VANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTS 244 (485)
Q Consensus 165 ~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~ 244 (485)
.+|||-+|-| |-|-|.-.... .+...+|+++.+||....+.. .+.-.+++|.|+|+|||.+-.+|.+...
T Consensus 73 d~nVI~VDw~-g~g~s~y~~a~----~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~p~---- 142 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPTSA----AYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLTKH---- 142 (442)
T ss_pred CCEEEEEECC-CcCCCCCcccc----ccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhCCc----
Confidence 4799999976 44433211111 133567788888776444333 3556789999999999988888765422
Q ss_pred CceeeeeeeEecccc
Q 011469 245 KTIINLKGIAIGNAW 259 (485)
Q Consensus 245 ~~~inLkGi~iGNg~ 259 (485)
.|..|++-+|.
T Consensus 143 ----rV~rItgLDPA 153 (442)
T TIGR03230 143 ----KVNRITGLDPA 153 (442)
T ss_pred ----ceeEEEEEcCC
Confidence 27777776653
No 85
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=96.32 E-value=0.021 Score=56.98 Aligned_cols=245 Identities=17% Similarity=0.200 Sum_probs=121.6
Q ss_pred CCCeEEEEcC-CCChhh-hhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCCCCCCCCCChhh
Q 011469 119 SKPLVLWLNG-GPGCSS-LGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNT 196 (485)
Q Consensus 119 ~~PlvLWLnG-GPGcSS-l~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~ 196 (485)
++|.+|=++- |.-.-| . -++|.- | .-..-.+.+-++-||. +|-..--..-+.+|.-.+.++.
T Consensus 22 ~kp~ilT~HDvGlNh~scF-~~ff~~--~------------~m~~i~~~f~i~Hi~a-PGqe~ga~~~p~~y~yPsmd~L 85 (283)
T PF03096_consen 22 NKPAILTYHDVGLNHKSCF-QGFFNF--E------------DMQEILQNFCIYHIDA-PGQEEGAATLPEGYQYPSMDQL 85 (283)
T ss_dssp TS-EEEEE--TT--HHHHC-HHHHCS--H------------HHHHHHTTSEEEEEE--TTTSTT-----TT-----HHHH
T ss_pred CCceEEEeccccccchHHH-HHHhcc--h------------hHHHHhhceEEEEEeC-CCCCCCcccccccccccCHHHH
Confidence 7898888885 444444 3 133321 1 1123446788999995 5665544444445333478899
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccccccccchhhHHHhhc
Q 011469 197 AEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTH 276 (485)
Q Consensus 197 A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~~~~~~~~~~~~~~ 276 (485)
|+++-+.|..| +=+.+.-+|+--|......+|-.-.+. +.|+++.|+.. ...++.|++++.
T Consensus 86 Ae~l~~Vl~~f-------~lk~vIg~GvGAGAnIL~rfAl~~p~~--------V~GLiLvn~~~----~~~gw~Ew~~~K 146 (283)
T PF03096_consen 86 AEMLPEVLDHF-------GLKSVIGFGVGAGANILARFALKHPER--------VLGLILVNPTC----TAAGWMEWFYQK 146 (283)
T ss_dssp HCTHHHHHHHH-------T---EEEEEETHHHHHHHHHHHHSGGG--------EEEEEEES-------S---HHHHHHHH
T ss_pred HHHHHHHHHhC-------CccEEEEEeeccchhhhhhccccCccc--------eeEEEEEecCC----CCccHHHHHHHH
Confidence 99988866643 335789999988777777777655444 89999976654 445666655542
Q ss_pred ---------cCCCHHHHHHHH-hhc-cccCCCCchhHHHHHHHHHHhh-CCCcccccccccCCCCCCCCCCCCCcccCCC
Q 011469 277 ---------ALNSDETNAAIN-KYC-DFATGQLSTSCDQYQTQGVREY-GQIDLYNVYAPLCKSSAPPPPTAGVIREYDP 344 (485)
Q Consensus 277 ---------gli~~~~~~~i~-~~C-~~~~~~~~~~C~~~~~~~~~~~-g~i~~Yni~~~~C~~~~~~~~~~~~~~~~dp 344 (485)
|+-+ ...+.+. ..- ........ ++.+.+.+.. ..+|+-|+
T Consensus 147 ~~~~~L~~~gmt~-~~~d~Ll~h~Fg~~~~~~n~----Dlv~~yr~~l~~~~Np~Nl----------------------- 198 (283)
T PF03096_consen 147 LSSWLLYSYGMTS-SVKDYLLWHYFGKEEEENNS----DLVQTYRQHLDERINPKNL----------------------- 198 (283)
T ss_dssp HH-------CTTS--HHHHHHHHHS-HHHHHCT-----HHHHHHHHHHHT-TTHHHH-----------------------
T ss_pred Hhccccccccccc-chHHhhhhcccccccccccH----HHHHHHHHHHhcCCCHHHH-----------------------
Confidence 2221 1111111 000 00000011 1222222222 22333332
Q ss_pred CChhHHHHHhChHHHHHHhcCCCCCccccCcccccCCCCCchHHHHHHhhcCcEEEEEecCCccccCchhHHHHHHHcCC
Q 011469 345 CSDKYVNSYLNLAEVQAALHAKHTNWSTCSDLTWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNL 424 (485)
Q Consensus 345 c~~~~~~~ylN~~~Vq~AL~v~~~~w~~cs~~v~~d~~~s~~~~l~~Ll~~girVlIysGd~D~i~p~~gt~~~i~~L~w 424 (485)
..++..|++|.|....+.. .+.|||++.|+.-.-.. .+...-.+|+=
T Consensus 199 --~~f~~sy~~R~DL~~~~~~-----------------------------~~c~vLlvvG~~Sp~~~--~vv~~ns~Ldp 245 (283)
T PF03096_consen 199 --ALFLNSYNSRTDLSIERPS-----------------------------LGCPVLLVVGDNSPHVD--DVVEMNSKLDP 245 (283)
T ss_dssp --HHHHHHHHT-----SECTT-----------------------------CCS-EEEEEETTSTTHH--HHHHHHHHS-C
T ss_pred --HHHHHHHhccccchhhcCC-----------------------------CCCCeEEEEecCCcchh--hHHHHHhhcCc
Confidence 1356677777664432211 14899999999843322 22344455651
Q ss_pred CCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHHHHHHcCCC
Q 011469 425 PVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMISSFLEGKL 481 (485)
Q Consensus 425 ~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~~~fl~g~~ 481 (485)
. .-|++.|.++|=||-.+||+...+-|+-||+|.-
T Consensus 246 ~----------------------~ttllkv~dcGglV~eEqP~klaea~~lFlQG~G 280 (283)
T PF03096_consen 246 T----------------------KTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGMG 280 (283)
T ss_dssp C----------------------CEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHTT
T ss_pred c----------------------cceEEEecccCCcccccCcHHHHHHHHHHHccCC
Confidence 1 3499999999999999999999999999999864
No 86
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=96.31 E-value=0.021 Score=62.80 Aligned_cols=130 Identities=18% Similarity=0.167 Sum_probs=82.0
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCc-ccccceEEEeCCCCcccc
Q 011469 102 AGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAW-NNVANVLFLETPAGVGFS 180 (485)
Q Consensus 102 ~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sW-n~~anvLflDqPvGvGFS 180 (485)
.|..|+.+++... +.+..|+||.++|-...+... . +.. . ....-| .+-+.|+-+| ..|.|.|
T Consensus 5 DG~~L~~~~~~P~-~~~~~P~Il~~~gyg~~~~~~-~-----~~~--------~-~~~~~l~~~Gy~vv~~D-~RG~g~S 67 (550)
T TIGR00976 5 DGTRLAIDVYRPA-GGGPVPVILSRTPYGKDAGLR-W-----GLD--------K-TEPAWFVAQGYAVVIQD-TRGRGAS 67 (550)
T ss_pred CCCEEEEEEEecC-CCCCCCEEEEecCCCCchhhc-c-----ccc--------c-ccHHHHHhCCcEEEEEe-ccccccC
Confidence 4667887766443 345689999998753322110 0 000 0 001112 2468899999 5899999
Q ss_pred ccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccc
Q 011469 181 YSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (485)
Q Consensus 181 y~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~i 260 (485)
-+.... + + ...++|+.+++ +|+.+.| +-+.++.++|+||||...-.+|..- .-.||+++..+++.
T Consensus 68 ~g~~~~-~---~-~~~~~D~~~~i-~~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~~~--------~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 68 EGEFDL-L---G-SDEAADGYDLV-DWIAKQP-WCDGNVGMLGVSYLAVTQLLAAVLQ--------PPALRAIAPQEGVW 132 (550)
T ss_pred CCceEe-c---C-cccchHHHHHH-HHHHhCC-CCCCcEEEEEeChHHHHHHHHhccC--------CCceeEEeecCccc
Confidence 764321 1 2 45788888844 4887776 3456899999999998766665432 22499999988887
Q ss_pred ccc
Q 011469 261 DDN 263 (485)
Q Consensus 261 d~~ 263 (485)
|..
T Consensus 133 d~~ 135 (550)
T TIGR00976 133 DLY 135 (550)
T ss_pred chh
Confidence 644
No 87
>PLN00021 chlorophyllase
Probab=96.28 E-value=0.009 Score=60.93 Aligned_cols=116 Identities=13% Similarity=0.126 Sum_probs=68.8
Q ss_pred CCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCCCCCCCCCChhh
Q 011469 117 SSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNT 196 (485)
Q Consensus 117 ~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~ 196 (485)
..+.|+||+++|+.+.... |..+.+ .+ -+| -+.|+.+|-+ | ++..+.. .+-+.
T Consensus 49 ~g~~PvVv~lHG~~~~~~~-y~~l~~-----------~L----as~--G~~VvapD~~-g--~~~~~~~------~~i~d 101 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSF-YSQLLQ-----------HI----ASH--GFIVVAPQLY-T--LAGPDGT------DEIKD 101 (313)
T ss_pred CCCCCEEEEECCCCCCccc-HHHHHH-----------HH----HhC--CCEEEEecCC-C--cCCCCch------hhHHH
Confidence 4678999999999765544 333221 01 112 3577888864 2 3321111 22234
Q ss_pred HHHHHHHHHHHHHHC-C---CCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccccc
Q 011469 197 AEDSYTFLVNWFERF-P---QYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (485)
Q Consensus 197 A~d~~~fL~~f~~~f-P---ey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~ 262 (485)
+.++..+|.+-++.. | +....+++|+|+|+||+.+-.+|....+.. ....+++++..+|+...
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~---~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS---LPLKFSALIGLDPVDGT 168 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc---cccceeeEEeecccccc
Confidence 566666666544331 2 233468999999999998888886544321 12458888887776543
No 88
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.21 E-value=0.016 Score=49.20 Aligned_cols=65 Identities=23% Similarity=0.260 Sum_probs=53.7
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMISS 475 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~~~ 475 (485)
..+|||.+|+.|.++|+.+++...+.|. +-.++++.++||-+-...=.-+.+++.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~------------------------~s~lvt~~g~gHg~~~~~s~C~~~~v~~ 89 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP------------------------GSRLVTVDGAGHGVYAGGSPCVDKAVDD 89 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC------------------------CceEEEEeccCcceecCCChHHHHHHHH
Confidence 3899999999999999999999999876 4478999999999985443566778888
Q ss_pred HHcCCCCCC
Q 011469 476 FLEGKLPPS 484 (485)
Q Consensus 476 fl~g~~~p~ 484 (485)
||..-.+|.
T Consensus 90 yl~~G~lP~ 98 (103)
T PF08386_consen 90 YLLDGTLPA 98 (103)
T ss_pred HHHcCCCCC
Confidence 877656663
No 89
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.20 E-value=0.056 Score=55.60 Aligned_cols=145 Identities=16% Similarity=0.227 Sum_probs=90.2
Q ss_pred eeeEEecCCCCceEEEEEEecCCC-C-CCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcc-cccceE
Q 011469 93 AGYLTVDPKAGRALFYYFVESPQS-S-SSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWN-NVANVL 169 (485)
Q Consensus 93 sGyv~v~~~~~~~lFy~f~ea~~~-~-~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn-~~anvL 169 (485)
+.=|+.+ ....++-+.|..... + ..+|++||++||=-|-+.. + ...+.+--.+. +.+|++
T Consensus 63 ~~dv~~~--~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~------------~---~~~y~~~~~~~a~~~~~v 125 (336)
T KOG1515|consen 63 SKDVTID--PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSA------------N---SPAYDSFCTRLAAELNCV 125 (336)
T ss_pred eeeeEec--CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCC------------C---CchhHHHHHHHHHHcCeE
Confidence 3444443 457799998887643 3 6899999999997776642 0 01112222232 556666
Q ss_pred EEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHH-HHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCcee
Q 011469 170 FLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVN-WFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTII 248 (485)
Q Consensus 170 flDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~-f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~i 248 (485)
-|= |+|--+-. ..++. .-++.-+.+..|+.+ |++..-..+ +++|+|.|-||..+-.+|.++.+.. ...+
T Consensus 126 vvS----VdYRLAPE-h~~Pa-~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~--~~~~ 195 (336)
T KOG1515|consen 126 VVS----VDYRLAPE-HPFPA-AYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK--LSKP 195 (336)
T ss_pred EEe----cCcccCCC-CCCCc-cchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc--CCCc
Confidence 553 35544432 23432 333333334444444 776665544 4999999999999999999988651 2367
Q ss_pred eeeeeEeccccccccc
Q 011469 249 NLKGIAIGNAWIDDNL 264 (485)
Q Consensus 249 nLkGi~iGNg~id~~~ 264 (485)
.|+|+++.-|+.....
T Consensus 196 ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 196 KIKGQILIYPFFQGTD 211 (336)
T ss_pred ceEEEEEEecccCCCC
Confidence 8999999888776543
No 90
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=95.91 E-value=0.11 Score=53.34 Aligned_cols=129 Identities=19% Similarity=0.256 Sum_probs=69.5
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhh--hhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCcc-
Q 011469 102 AGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYG--AMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVG- 178 (485)
Q Consensus 102 ~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G--~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvG- 178 (485)
.|..++=|+..-......-|.||.++|..|.+..... .+...| .=+|.+| +.|-|
T Consensus 65 ~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G---------------------~~vl~~d-~rGqg~ 122 (320)
T PF05448_consen 65 DGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAG---------------------YAVLAMD-VRGQGG 122 (320)
T ss_dssp GGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT----------------------EEEEE---TTTSS
T ss_pred CCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCC---------------------eEEEEec-CCCCCC
Confidence 3455665666554345788999999998776543100 122222 2245555 45555
Q ss_pred cccc------CCCCCCCCCCCh---------hhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCC
Q 011469 179 FSYS------NTSSDYSNPGDN---------NTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNT 243 (485)
Q Consensus 179 FSy~------~~~~~~~~~~d~---------~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~ 243 (485)
.|-. ....++...+.+ ....|.+. ...|+...|+.-.+++.++|+|-||-..-.+|.. +..
T Consensus 123 ~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~r-avd~l~slpevD~~rI~v~G~SqGG~lal~~aaL--d~r- 198 (320)
T PF05448_consen 123 RSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVR-AVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAAL--DPR- 198 (320)
T ss_dssp SS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHH-HHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH--SST-
T ss_pred CCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHH-HHHHHHhCCCcCcceEEEEeecCchHHHHHHHHh--Ccc-
Confidence 1110 000111000111 23455666 4567888999999999999999999987777652 221
Q ss_pred CCceeeeeeeEeccccccc
Q 011469 244 SKTIINLKGIAIGNAWIDD 262 (485)
Q Consensus 244 ~~~~inLkGi~iGNg~id~ 262 (485)
+++++...|++.+
T Consensus 199 ------v~~~~~~vP~l~d 211 (320)
T PF05448_consen 199 ------VKAAAADVPFLCD 211 (320)
T ss_dssp -------SEEEEESESSSS
T ss_pred ------ccEEEecCCCccc
Confidence 8888887776544
No 91
>PRK10162 acetyl esterase; Provisional
Probab=95.74 E-value=0.03 Score=57.11 Aligned_cols=62 Identities=10% Similarity=0.028 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccccc
Q 011469 198 EDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (485)
Q Consensus 198 ~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~ 262 (485)
.+.++++.+..+.+ .....+++|+|+|.||+.+-.+|....+.. .....++|+++..|+++.
T Consensus 136 ~~a~~~l~~~~~~~-~~d~~~i~l~G~SaGG~la~~~a~~~~~~~--~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 136 VAVCCYFHQHAEDY-GINMSRIGFAGDSAGAMLALASALWLRDKQ--IDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHHhHHHh-CCChhHEEEEEECHHHHHHHHHHHHHHhcC--CCccChhheEEECCccCC
Confidence 33444444433333 233568999999999999999988765542 112457888888888764
No 92
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=95.54 E-value=0.049 Score=52.70 Aligned_cols=53 Identities=17% Similarity=0.159 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccc
Q 011469 200 SYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (485)
Q Consensus 200 ~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~i 260 (485)
+...|.+.+......-.+++|++|.|-||...-.+|....+. +.++++..|..
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~--------faa~a~~sG~~ 132 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDL--------FAAVAVVSGVP 132 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCcc--------ceEEEeecccc
Confidence 344455555555467788999999999999998888877665 88888877663
No 93
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.43 E-value=0.67 Score=45.26 Aligned_cols=59 Identities=15% Similarity=0.195 Sum_probs=47.0
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMISS 475 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~~~ 475 (485)
..+|.++.|+.|.+|...-...|-+..+ +.+++ .+...|||-+..|.+..+..+.+
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t~-----------------------~~f~l-~~fdGgHFfl~~~~~~v~~~i~~ 231 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHTK-----------------------GDFTL-RVFDGGHFFLNQQREEVLARLEQ 231 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhhc-----------------------CCceE-EEecCcceehhhhHHHHHHHHHH
Confidence 5899999999999999887777765533 23444 45566999999999999999998
Q ss_pred HHc
Q 011469 476 FLE 478 (485)
Q Consensus 476 fl~ 478 (485)
.+.
T Consensus 232 ~l~ 234 (244)
T COG3208 232 HLA 234 (244)
T ss_pred Hhh
Confidence 874
No 94
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.81 E-value=0.21 Score=49.05 Aligned_cols=61 Identities=21% Similarity=0.211 Sum_probs=47.1
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMISS 475 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~~~ 475 (485)
..||||++|..|-++|+.-.++..+..+ +.....+|+||||--..--| .-++.+++
T Consensus 192 ~~PVLiiHgtdDevv~~sHg~~Lye~~k-----------------------~~~epl~v~g~gH~~~~~~~-~yi~~l~~ 247 (258)
T KOG1552|consen 192 TCPVLIIHGTDDEVVDFSHGKALYERCK-----------------------EKVEPLWVKGAGHNDIELYP-EYIEHLRR 247 (258)
T ss_pred cCCEEEEecccCceecccccHHHHHhcc-----------------------ccCCCcEEecCCCcccccCH-HHHHHHHH
Confidence 4699999999999999998877776643 12467899999999877666 56677777
Q ss_pred HHcCC
Q 011469 476 FLEGK 480 (485)
Q Consensus 476 fl~g~ 480 (485)
|+...
T Consensus 248 f~~~~ 252 (258)
T KOG1552|consen 248 FISSV 252 (258)
T ss_pred HHHHh
Confidence 76543
No 95
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=94.79 E-value=0.17 Score=50.35 Aligned_cols=120 Identities=18% Similarity=0.263 Sum_probs=80.9
Q ss_pred CCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCCC----CCCCCCChh
Q 011469 120 KPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSS----DYSNPGDNN 195 (485)
Q Consensus 120 ~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~----~~~~~~d~~ 195 (485)
+++++|+-|=||.-.. |--|.+ .|..+- +..+.|+=+... |||...... +....+-++
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~-----------~L~~~l---~~~~~i~~ish~---Gh~~~~~~~~~~~~~~~~sL~~ 63 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLS-----------ALYEKL---NPQFEILGISHA---GHSTSPSNSKFSPNGRLFSLQD 63 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHH-----------HHHHhC---CCCCeeEEecCC---CCcCCcccccccCCCCccCHHH
Confidence 5899999999999998 766664 244332 567777777763 555544331 111236677
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccccc
Q 011469 196 TAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (485)
Q Consensus 196 ~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~ 263 (485)
..+.-++||.++....+ ..+.+++|.|||-|+..+-.+.+++.+ ...+++++++-=|-+...
T Consensus 64 QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGayi~levl~r~~~-----~~~~V~~~~lLfPTi~~i 125 (266)
T PF10230_consen 64 QIEHKIDFIKELIPQKN-KPNVKLILIGHSIGAYIALEVLKRLPD-----LKFRVKKVILLFPTIEDI 125 (266)
T ss_pred HHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHHHHHHHHHhccc-----cCCceeEEEEeCCccccc
Confidence 77888888988887664 256899999999999877777666641 135566666655555443
No 96
>COG1647 Esterase/lipase [General function prediction only]
Probab=94.61 E-value=0.83 Score=44.06 Aligned_cols=61 Identities=18% Similarity=0.284 Sum_probs=50.2
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCcc-ChHHHHHHHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTY-QPQRALIMIS 474 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~d-qP~~al~l~~ 474 (485)
-.+++|..|..|-++|..++....+.+.=..+ .+.+..++||-+-.| +-+...+-+-
T Consensus 181 ~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~K----------------------eL~~~e~SgHVIt~D~Erd~v~e~V~ 238 (243)
T COG1647 181 YSPTLVVQGRQDEMVPAESANFIYDHVESDDK----------------------ELKWLEGSGHVITLDKERDQVEEDVI 238 (243)
T ss_pred ccchhheecccCCCCCHHHHHHHHHhccCCcc----------------------eeEEEccCCceeecchhHHHHHHHHH
Confidence 47999999999999999999999999874444 578889999999887 4556667777
Q ss_pred HHHc
Q 011469 475 SFLE 478 (485)
Q Consensus 475 ~fl~ 478 (485)
+||.
T Consensus 239 ~FL~ 242 (243)
T COG1647 239 TFLE 242 (243)
T ss_pred HHhh
Confidence 7775
No 97
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=94.55 E-value=2.6 Score=45.56 Aligned_cols=87 Identities=22% Similarity=0.267 Sum_probs=64.5
Q ss_pred chHHHHHHhhcCcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEE-EeecceEEEEEcCCCccC--
Q 011469 385 VLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYV-LGYKGVIFTTVRGAGHLV-- 461 (485)
Q Consensus 385 ~~~~l~~Ll~~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~-~~y~~Ltf~~V~gAGHmV-- 461 (485)
.-|-|....++|=|+|+|+|-.|.++|..+|..+.+++.-. .+|-. ..-+-+.|..|+|.||--
T Consensus 342 ~~pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~-------------~g~~~~~v~dF~RlF~vPGm~HC~gG 408 (474)
T PF07519_consen 342 TDPDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVAR-------------MGGALADVDDFYRLFMVPGMGHCGGG 408 (474)
T ss_pred CCcCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHh-------------cccccccccceeEEEecCCCcccCCC
Confidence 44667788889999999999999999999999999886511 11110 111125689999999986
Q ss_pred CccChHHHHHHHHHHHcCCCCCC
Q 011469 462 PTYQPQRALIMISSFLEGKLPPS 484 (485)
Q Consensus 462 P~dqP~~al~l~~~fl~g~~~p~ 484 (485)
|-..|-.+|..+.+|+.+-.-|+
T Consensus 409 ~g~~~~d~l~aL~~WVE~G~AP~ 431 (474)
T PF07519_consen 409 PGPDPFDALTALVDWVENGKAPE 431 (474)
T ss_pred CCCCCCCHHHHHHHHHhCCCCCC
Confidence 44567788888999988765554
No 98
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=94.23 E-value=0.066 Score=53.14 Aligned_cols=85 Identities=25% Similarity=0.294 Sum_probs=63.3
Q ss_pred cccceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCC
Q 011469 164 NVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNT 243 (485)
Q Consensus 164 ~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~ 243 (485)
+-+.+|.+| ..|+|-|.+.-.. ...+.++|.++ +.+|+.+-| .-+-++-++|-||+|......|..-..+
T Consensus 56 ~GY~vV~~D-~RG~g~S~G~~~~-----~~~~e~~D~~d-~I~W~~~Qp-ws~G~VGm~G~SY~G~~q~~~A~~~~p~-- 125 (272)
T PF02129_consen 56 RGYAVVVQD-VRGTGGSEGEFDP-----MSPNEAQDGYD-TIEWIAAQP-WSNGKVGMYGISYGGFTQWAAAARRPPH-- 125 (272)
T ss_dssp TT-EEEEEE--TTSTTS-S-B-T-----TSHHHHHHHHH-HHHHHHHCT-TEEEEEEEEEETHHHHHHHHHHTTT-TT--
T ss_pred CCCEEEEEC-CcccccCCCcccc-----CChhHHHHHHH-HHHHHHhCC-CCCCeEEeeccCHHHHHHHHHHhcCCCC--
Confidence 347799999 6999999886432 25678999999 788999986 4445899999999999988888744444
Q ss_pred CCceeeeeeeEeccccccccc
Q 011469 244 SKTIINLKGIAIGNAWIDDNL 264 (485)
Q Consensus 244 ~~~~inLkGi~iGNg~id~~~ 264 (485)
||.|+..-+..|...
T Consensus 126 ------LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 126 ------LKAIVPQSGWSDLYR 140 (272)
T ss_dssp ------EEEEEEESE-SBTCC
T ss_pred ------ceEEEecccCCcccc
Confidence 999999888887765
No 99
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=94.14 E-value=0.14 Score=49.17 Aligned_cols=122 Identities=22% Similarity=0.339 Sum_probs=81.1
Q ss_pred ceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccC
Q 011469 104 RALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSN 183 (485)
Q Consensus 104 ~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~ 183 (485)
-.|-=|...++ .+.|.+|.++|-.|- | |.+.-+ .+ .++. +=..||+-+|- .|-|.|.+.
T Consensus 65 vtL~a~~~~~E---~S~pTlLyfh~NAGN--m--Ghr~~i------~~--~fy~-----~l~mnv~ivsY-RGYG~S~Gs 123 (300)
T KOG4391|consen 65 VTLDAYLMLSE---SSRPTLLYFHANAGN--M--GHRLPI------AR--VFYV-----NLKMNVLIVSY-RGYGKSEGS 123 (300)
T ss_pred eeEeeeeeccc---CCCceEEEEccCCCc--c--cchhhH------HH--HHHH-----HcCceEEEEEe-eccccCCCC
Confidence 34544545443 388999999998764 2 222211 00 1111 23478999995 999999887
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccccc
Q 011469 184 TSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (485)
Q Consensus 184 ~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~ 262 (485)
.+..-- .-|.++| ..++-..|...+++++++|.|-||.-+-.+|.+-.+. +.++++-|-+++-
T Consensus 124 psE~GL-~lDs~av-------ldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~r--------i~~~ivENTF~SI 186 (300)
T KOG4391|consen 124 PSEEGL-KLDSEAV-------LDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDR--------ISAIIVENTFLSI 186 (300)
T ss_pred ccccce-eccHHHH-------HHHHhcCccCCcceEEEEecccCCeeEEEeeccchhh--------eeeeeeechhccc
Confidence 653211 1333333 2345578889999999999999999998888876554 8999998888764
No 100
>COG4099 Predicted peptidase [General function prediction only]
Probab=94.01 E-value=0.87 Score=45.76 Aligned_cols=52 Identities=12% Similarity=0.020 Sum_probs=36.4
Q ss_pred HHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccc
Q 011469 202 TFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 261 (485)
Q Consensus 202 ~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id 261 (485)
+.+.+=+...+..-..++|++|-|-||.-.=+++.+..+. +.+.+...|--|
T Consensus 254 dli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdf--------FAaa~~iaG~~d 305 (387)
T COG4099 254 DLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDF--------FAAAVPIAGGGD 305 (387)
T ss_pred HHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchh--------hheeeeecCCCc
Confidence 3333344456667788999999999999888888887766 666655444433
No 101
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=93.84 E-value=0.14 Score=48.71 Aligned_cols=77 Identities=17% Similarity=0.199 Sum_probs=52.5
Q ss_pred ccceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCC
Q 011469 165 VANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTS 244 (485)
Q Consensus 165 ~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~ 244 (485)
..+|..|+.| |-+ -... .. .+.++.|++..+.|+ +..|+ .|++|+|+|+||..+=.+|+++.++.
T Consensus 27 ~~~v~~i~~~-~~~--~~~~---~~-~si~~la~~y~~~I~---~~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~G-- 91 (229)
T PF00975_consen 27 VIGVYGIEYP-GRG--DDEP---PP-DSIEELASRYAEAIR---ARQPE---GPYVLAGWSFGGILAFEMARQLEEAG-- 91 (229)
T ss_dssp EEEEEEECST-TSC--TTSH---EE-SSHHHHHHHHHHHHH---HHTSS---SSEEEEEETHHHHHHHHHHHHHHHTT--
T ss_pred eEEEEEEecC-CCC--CCCC---CC-CCHHHHHHHHHHHhh---hhCCC---CCeeehccCccHHHHHHHHHHHHHhh--
Confidence 4778999965 444 1111 11 255677777666554 34443 39999999999999999999988773
Q ss_pred CceeeeeeeEecccc
Q 011469 245 KTIINLKGIAIGNAW 259 (485)
Q Consensus 245 ~~~inLkGi~iGNg~ 259 (485)
...+.+++.++.
T Consensus 92 ---~~v~~l~liD~~ 103 (229)
T PF00975_consen 92 ---EEVSRLILIDSP 103 (229)
T ss_dssp ----SESEEEEESCS
T ss_pred ---hccCceEEecCC
Confidence 457788887754
No 102
>PRK07868 acyl-CoA synthetase; Validated
Probab=93.78 E-value=3.5 Score=48.77 Aligned_cols=59 Identities=17% Similarity=0.159 Sum_probs=46.9
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEE-EEEcCCCccCCc---cChHHHHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIF-TTVRGAGHLVPT---YQPQRALI 471 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf-~~V~gAGHmVP~---dqP~~al~ 471 (485)
..|+|++.|..|.++|...++.+.+.+. +..+ ..+.++|||.++ .-|+...-
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i~------------------------~a~~~~~~~~~GH~g~~~g~~a~~~~wp 352 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAAP------------------------NAEVYESLIRAGHFGLVVGSRAAQQTWP 352 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC------------------------CCeEEEEeCCCCCEeeeechhhhhhhCh
Confidence 5899999999999999999988877654 3355 567999999654 45666677
Q ss_pred HHHHHHc
Q 011469 472 MISSFLE 478 (485)
Q Consensus 472 l~~~fl~ 478 (485)
.+.+||.
T Consensus 353 ~i~~wl~ 359 (994)
T PRK07868 353 TVADWVK 359 (994)
T ss_pred HHHHHHH
Confidence 7888887
No 103
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=93.49 E-value=0.052 Score=57.03 Aligned_cols=83 Identities=17% Similarity=0.136 Sum_probs=56.4
Q ss_pred cccceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCC
Q 011469 164 NVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNT 243 (485)
Q Consensus 164 ~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~ 243 (485)
+-.+||=+|= +|||+|.... + + .+ .+-++..+.+|+...|+.-..++.++|-|.||.|++.+|..=..+
T Consensus 217 rGiA~LtvDm-PG~G~s~~~~---l---~-~D-~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~R-- 285 (411)
T PF06500_consen 217 RGIAMLTVDM-PGQGESPKWP---L---T-QD-SSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPR-- 285 (411)
T ss_dssp CT-EEEEE---TTSGGGTTT----S-----S--CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT--
T ss_pred CCCEEEEEcc-CCCcccccCC---C---C-cC-HHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccc--
Confidence 5568999995 6999985322 1 1 11 234667788889999999999999999999999999999643233
Q ss_pred CCceeeeeeeEecccccccc
Q 011469 244 SKTIINLKGIAIGNAWIDDN 263 (485)
Q Consensus 244 ~~~~inLkGi~iGNg~id~~ 263 (485)
|||++.-.|.++..
T Consensus 286 ------lkavV~~Ga~vh~~ 299 (411)
T PF06500_consen 286 ------LKAVVALGAPVHHF 299 (411)
T ss_dssp -------SEEEEES---SCG
T ss_pred ------eeeEeeeCchHhhh
Confidence 89987777766543
No 104
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=92.73 E-value=0.57 Score=49.17 Aligned_cols=132 Identities=20% Similarity=0.329 Sum_probs=82.1
Q ss_pred eeEEecCCCCceEEEEEEecCC----CCCCCCeEEEEcCCCChhhhh-----hhhhhhcCCeEEcCCCCccccCccCccc
Q 011469 94 GYLTVDPKAGRALFYYFVESPQ----SSSSKPLVLWLNGGPGCSSLG-----YGAMEELGPFRVNSDGKTLYRNEYAWNN 164 (485)
Q Consensus 94 Gyv~v~~~~~~~lFy~f~ea~~----~~~~~PlvLWLnGGPGcSSl~-----~G~~~E~GP~~v~~~~~~l~~N~~sWn~ 164 (485)
=+|...+ .|.-.+=|+..... +..++|++|.|.|=.|.|.-. ....++.| +++
T Consensus 96 eii~~~D-GG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~---------------- 157 (409)
T KOG1838|consen 96 EIIKTSD-GGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRV---------------- 157 (409)
T ss_pred EEEEeCC-CCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEE----------------
Confidence 3455443 23334446544332 357889999999998887632 23445555 432
Q ss_pred ccceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCC
Q 011469 165 VANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTS 244 (485)
Q Consensus 165 ~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~ 244 (485)
+-+- +.|.|-|--+++.-|.- +. -+|+-++++---++||+ +++|.+|.|+||..+ .+++-+..
T Consensus 158 ----VVfN-~RG~~g~~LtTpr~f~a-g~---t~Dl~~~v~~i~~~~P~---a~l~avG~S~Gg~iL---~nYLGE~g-- 220 (409)
T KOG1838|consen 158 ----VVFN-HRGLGGSKLTTPRLFTA-GW---TEDLREVVNHIKKRYPQ---APLFAVGFSMGGNIL---TNYLGEEG-- 220 (409)
T ss_pred ----EEEC-CCCCCCCccCCCceeec-CC---HHHHHHHHHHHHHhCCC---CceEEEEecchHHHH---HHHhhhcc--
Confidence 2222 69999998776665542 33 35666666655578884 799999999999854 34443332
Q ss_pred CceeeeeeeEeccccc
Q 011469 245 KTIINLKGIAIGNAWI 260 (485)
Q Consensus 245 ~~~inLkGi~iGNg~i 260 (485)
...-=..|++|-|||-
T Consensus 221 ~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 221 DNTPLIAAVAVCNPWD 236 (409)
T ss_pred CCCCceeEEEEeccch
Confidence 1122378899999983
No 105
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=92.13 E-value=0.6 Score=50.29 Aligned_cols=39 Identities=21% Similarity=0.180 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHH
Q 011469 197 AEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAY 236 (485)
Q Consensus 197 A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~ 236 (485)
....++++++-.+.|. -..+++.|+|||+||+.+-.++.
T Consensus 157 ~~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~~ 195 (493)
T cd00312 157 QRLALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLLL 195 (493)
T ss_pred HHHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHhh
Confidence 3445556666666663 34568999999999987655543
No 106
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=91.69 E-value=1 Score=45.47 Aligned_cols=47 Identities=15% Similarity=0.160 Sum_probs=38.4
Q ss_pred CCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccccccc
Q 011469 214 YKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNL 264 (485)
Q Consensus 214 y~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~~ 264 (485)
...+++.|+|+|-||+.+-.+|....+.. ....++.++.-|++|...
T Consensus 149 ~dp~~i~v~GdSAGG~La~~~a~~~~~~~----~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 149 IDPSRIAVAGDSAGGHLALALALAARDRG----LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred CCccceEEEecCcccHHHHHHHHHHHhcC----CCCceEEEEEecccCCcc
Confidence 34678999999999999999999887652 334788888899988875
No 107
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=91.66 E-value=8.7 Score=38.73 Aligned_cols=124 Identities=15% Similarity=0.197 Sum_probs=71.2
Q ss_pred CCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCCCCCCCCCChhhHH
Q 011469 119 SKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAE 198 (485)
Q Consensus 119 ~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~ 198 (485)
++|.+|=.+. =|+-+.. .|+++ .--++ --+....+-++-||.| |.=.--..-+.+|.-.+.++.|+
T Consensus 45 ~kpaiiTyhD-lglN~~s--cFq~f---f~~p~-------m~ei~~~fcv~HV~~P-Gqe~gAp~~p~~y~yPsmd~LAd 110 (326)
T KOG2931|consen 45 NKPAIITYHD-LGLNHKS--CFQGF---FNFPD-------MAEILEHFCVYHVDAP-GQEDGAPSFPEGYPYPSMDDLAD 110 (326)
T ss_pred CCceEEEecc-cccchHh--HhHHh---hcCHh-------HHHHHhheEEEecCCC-ccccCCccCCCCCCCCCHHHHHH
Confidence 6788665554 4666552 23321 11111 1234455788899965 43222111123332237788999
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccccccccchhhHHHhh
Q 011469 199 DSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWT 275 (485)
Q Consensus 199 d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~~~~~~~~~~~~~ 275 (485)
++...|..| .=+-+.=+|+--|.....-+|..-.+. +-|+++.|.. -...++.|++++
T Consensus 111 ~l~~VL~~f-------~lk~vIg~GvGAGAyIL~rFAl~hp~r--------V~GLvLIn~~----~~a~gwiew~~~ 168 (326)
T KOG2931|consen 111 MLPEVLDHF-------GLKSVIGMGVGAGAYILARFALNHPER--------VLGLVLINCD----PCAKGWIEWAYN 168 (326)
T ss_pred HHHHHHHhc-------CcceEEEecccccHHHHHHHHhcChhh--------eeEEEEEecC----CCCchHHHHHHH
Confidence 998877632 334577788876666666677655554 8899986654 345567776654
No 108
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=91.47 E-value=0.29 Score=45.93 Aligned_cols=64 Identities=20% Similarity=0.288 Sum_probs=47.5
Q ss_pred hhhHHHHHHHHHHHHHH---CCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccccc
Q 011469 194 NNTAEDSYTFLVNWFER---FPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (485)
Q Consensus 194 ~~~A~d~~~fL~~f~~~---fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~ 262 (485)
....+|+.+++.-..+. + ++...+++|+|+|-||+.+-.++..+.+.. ...++++++..|++|.
T Consensus 46 p~~~~D~~~a~~~l~~~~~~~-~~d~~~i~l~G~SAGg~la~~~~~~~~~~~----~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 46 PAALEDVKAAYRWLLKNADKL-GIDPERIVLIGDSAGGHLALSLALRARDRG----LPKPKGIILISPWTDL 112 (211)
T ss_dssp THHHHHHHHHHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHTT----TCHESEEEEESCHSST
T ss_pred cccccccccceeeeccccccc-cccccceEEeecccccchhhhhhhhhhhhc----ccchhhhhcccccccc
Confidence 35566666644433332 2 355679999999999999999998887763 2339999999998877
No 109
>PLN02454 triacylglycerol lipase
Probab=91.41 E-value=0.48 Score=49.90 Aligned_cols=68 Identities=18% Similarity=0.283 Sum_probs=53.0
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccccc
Q 011469 194 NNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (485)
Q Consensus 194 ~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~ 262 (485)
..+.+++...+++.++++|.++ ..++|+|||.||-.+--.|..|..+......+++..|..|.|-+..
T Consensus 206 ~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 206 LSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVGN 273 (414)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcccC
Confidence 3577889999999999998764 3699999999999999888888765311234567788888887754
No 110
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=89.77 E-value=0.68 Score=40.52 Aligned_cols=61 Identities=21% Similarity=0.321 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccc
Q 011469 196 TAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (485)
Q Consensus 196 ~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~i 260 (485)
..+.+.+.|++..++.| +.++.|+|||.||-.+..+|..+.++. .....+++-+..|.|-+
T Consensus 46 ~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~-~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 46 LYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHG-PSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCT-TTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcc-cccccceeeeecCCccc
Confidence 44566677777777776 478999999999999999999988864 11145677777777765
No 111
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=89.76 E-value=0.43 Score=46.55 Aligned_cols=72 Identities=13% Similarity=0.149 Sum_probs=48.3
Q ss_pred CChhhHHHHHHHHHHHHHHCCCC-CCCCeEEEeccccccchHHHHHHHHHcC-CCCceeeeeeeEecccccccc
Q 011469 192 GDNNTAEDSYTFLVNWFERFPQY-KNRDFFITGESYAGHYVPQLAYTILSKN-TSKTIINLKGIAIGNAWIDDN 263 (485)
Q Consensus 192 ~d~~~A~d~~~fL~~f~~~fPey-~~~~~yI~GESYgG~YvP~lA~~I~~~n-~~~~~inLkGi~iGNg~id~~ 263 (485)
.|.+.|...-..|.+|++..-+. ..++++|.+||+|+..+-..-..+.... .....-+|..|++.+|-+|..
T Consensus 67 ~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 67 YDRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDND 140 (233)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHH
Confidence 34445555555555555543333 4679999999999999888777776664 112223788899988888764
No 112
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=87.69 E-value=4.3 Score=39.16 Aligned_cols=180 Identities=19% Similarity=0.172 Sum_probs=107.7
Q ss_pred eEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCC-eEEEeccccccchHHHHHHHHHcCCCCc
Q 011469 168 VLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRD-FFITGESYAGHYVPQLAYTILSKNTSKT 246 (485)
Q Consensus 168 vLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~-~yI~GESYgG~YvP~lA~~I~~~n~~~~ 246 (485)
++=+| =.|-|-|-++ -+|. +-...|+|+...+|-|-. .+|- =.|.|||=||--+--.|.++.+- ..
T Consensus 65 ~fRfD-F~GnGeS~gs--f~~G--n~~~eadDL~sV~q~~s~-----~nr~v~vi~gHSkGg~Vvl~ya~K~~d~---~~ 131 (269)
T KOG4667|consen 65 AFRFD-FSGNGESEGS--FYYG--NYNTEADDLHSVIQYFSN-----SNRVVPVILGHSKGGDVVLLYASKYHDI---RN 131 (269)
T ss_pred EEEEE-ecCCCCcCCc--cccC--cccchHHHHHHHHHHhcc-----CceEEEEEEeecCccHHHHHHHHhhcCc---hh
Confidence 34455 4677777544 2222 334567999988776543 2222 26889999999999999888661 23
Q ss_pred eeeeeeeEecccccccccccchhhHHHhhccCCCHHHHHHHHhhccccCCCCchhHHHHHHHHHHhhCCCcccccccccC
Q 011469 247 IINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFATGQLSTSCDQYQTQGVREYGQIDLYNVYAPLC 326 (485)
Q Consensus 247 ~inLkGi~iGNg~id~~~~~~~~~~~~~~~gli~~~~~~~i~~~C~~~~~~~~~~C~~~~~~~~~~~g~i~~Yni~~~~C 326 (485)
.||+.|=..+-..|....+ ..+.++.-..|.|+-...+ ...|
T Consensus 132 viNcsGRydl~~~I~eRlg-~~~l~~ike~Gfid~~~rk-------------G~y~------------------------ 173 (269)
T KOG4667|consen 132 VINCSGRYDLKNGINERLG-EDYLERIKEQGFIDVGPRK-------------GKYG------------------------ 173 (269)
T ss_pred eEEcccccchhcchhhhhc-ccHHHHHHhCCceecCccc-------------CCcC------------------------
Confidence 5777766554444432211 2233333333333311000 0000
Q ss_pred CCCCCCCCCCCCcccCCCCChhHHHHHhChHHHHHHhcCCCCCccccCcccccCCCCCchHHHHHHhhcCcEEEEEecCC
Q 011469 327 KSSAPPPPTAGVIREYDPCSDKYVNSYLNLAEVQAALHAKHTNWSTCSDLTWTDSPSTVLPTIQQLIASGIRVWIYSGDT 406 (485)
Q Consensus 327 ~~~~~~~~~~~~~~~~dpc~~~~~~~ylN~~~Vq~AL~v~~~~w~~cs~~v~~d~~~s~~~~l~~Ll~~girVlIysGd~ 406 (485)
+--+...+...||-.-+++-+.++. .-|||-.+|-.
T Consensus 174 ----------------~rvt~eSlmdrLntd~h~aclkId~----------------------------~C~VLTvhGs~ 209 (269)
T KOG4667|consen 174 ----------------YRVTEESLMDRLNTDIHEACLKIDK----------------------------QCRVLTVHGSE 209 (269)
T ss_pred ----------------ceecHHHHHHHHhchhhhhhcCcCc----------------------------cCceEEEeccC
Confidence 0001123455666655555555443 48999999999
Q ss_pred ccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccCh
Q 011469 407 DGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQP 466 (485)
Q Consensus 407 D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP 466 (485)
|-+||...+..+.+.+. |=.|-.|.||-|.--.+|-
T Consensus 210 D~IVPve~AkefAk~i~------------------------nH~L~iIEgADHnyt~~q~ 245 (269)
T KOG4667|consen 210 DEIVPVEDAKEFAKIIP------------------------NHKLEIIEGADHNYTGHQS 245 (269)
T ss_pred CceeechhHHHHHHhcc------------------------CCceEEecCCCcCccchhh
Confidence 99999999999998876 3467889999888765553
No 113
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.85 E-value=2.7 Score=41.31 Aligned_cols=36 Identities=22% Similarity=0.344 Sum_probs=25.0
Q ss_pred hHHHHHHhh-cCcEEEEEecCCccccCchhHHHHHHH
Q 011469 386 LPTIQQLIA-SGIRVWIYSGDTDGRVPVTSSRYSINA 421 (485)
Q Consensus 386 ~~~l~~Ll~-~girVlIysGd~D~i~p~~gt~~~i~~ 421 (485)
...-.++++ ++..+++|-|-.|.-||..-..+.=+.
T Consensus 231 ~~~d~e~~een~d~l~Fyygt~DgW~p~~~~d~~kdd 267 (301)
T KOG3975|consen 231 TTRDIEYCEENLDSLWFYYGTNDGWVPSHYYDYYKDD 267 (301)
T ss_pred HHhHHHHHHhcCcEEEEEccCCCCCcchHHHHHHhhh
Confidence 334445555 578999999999999996544444333
No 114
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=85.98 E-value=1.4 Score=46.22 Aligned_cols=69 Identities=22% Similarity=0.309 Sum_probs=46.2
Q ss_pred ccceEEEe-------CCCCccccccCCC-CCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHH
Q 011469 165 VANVLFLE-------TPAGVGFSYSNTS-SDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAY 236 (485)
Q Consensus 165 ~anvLflD-------qPvGvGFSy~~~~-~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~ 236 (485)
.|-|+|+| +|.|.- ||.+.. -.|- +.+++-.|+-+ |..++++-+.=+..++..+|-||||....-+-.
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyL--tseQALADfA~-ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRl 186 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGYL--TSEQALADFAE-LLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRL 186 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhccc--cHHHHHHHHHH-HHHHHhhccccccCcEEEecCchhhHHHHHHHh
Confidence 46678887 476666 554432 2343 56677777666 666777765556789999999999976555544
Q ss_pred H
Q 011469 237 T 237 (485)
Q Consensus 237 ~ 237 (485)
+
T Consensus 187 K 187 (492)
T KOG2183|consen 187 K 187 (492)
T ss_pred c
Confidence 3
No 115
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=85.95 E-value=2.6 Score=40.27 Aligned_cols=61 Identities=13% Similarity=0.021 Sum_probs=46.7
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMISS 475 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~~~ 475 (485)
..+++|.+|..|..|+-... -||..+. ..-.+...+..+|....--|+....++..
T Consensus 216 kcPtli~hG~kDp~~~~~hv-~fi~~~~-----------------------~~a~~~~~peGkHn~hLrya~eFnklv~d 271 (277)
T KOG2984|consen 216 KCPTLIMHGGKDPFCGDPHV-CFIPVLK-----------------------SLAKVEIHPEGKHNFHLRYAKEFNKLVLD 271 (277)
T ss_pred cCCeeEeeCCcCCCCCCCCc-cchhhhc-----------------------ccceEEEccCCCcceeeechHHHHHHHHH
Confidence 68999999999999987643 2332221 12345667888999999999999999999
Q ss_pred HHcCC
Q 011469 476 FLEGK 480 (485)
Q Consensus 476 fl~g~ 480 (485)
|++..
T Consensus 272 Fl~~~ 276 (277)
T KOG2984|consen 272 FLKST 276 (277)
T ss_pred HHhcc
Confidence 99754
No 116
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=85.27 E-value=1.4 Score=39.53 Aligned_cols=43 Identities=16% Similarity=0.294 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHc
Q 011469 196 TAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSK 241 (485)
Q Consensus 196 ~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~ 241 (485)
.++.+...+++...++| ..+++|+|||.||..+-.+|..+.++
T Consensus 10 ~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~ 52 (153)
T cd00741 10 LANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGR 52 (153)
T ss_pred HHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhc
Confidence 34444555555555555 56899999999999999999888764
No 117
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=84.94 E-value=2.5 Score=44.96 Aligned_cols=99 Identities=16% Similarity=0.132 Sum_probs=65.3
Q ss_pred ccceEEEeCCCCccccccCC---CCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHc
Q 011469 165 VANVLFLETPAGVGFSYSNT---SSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSK 241 (485)
Q Consensus 165 ~anvLflDqPvGvGFSy~~~---~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~ 241 (485)
.|-||+||. +==|-|.-.. +..+.--+.+++-.|+..|++.+-+++....+.|+.++|-||||..+.-+-.+..+-
T Consensus 59 ~a~~v~lEH-RyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~ 137 (434)
T PF05577_consen 59 GALVVALEH-RYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHL 137 (434)
T ss_dssp TEEEEEE---TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT
T ss_pred CCcEEEeeh-hhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCe
Confidence 466888885 6666665211 111222377899999999999988888767788999999999999887777776554
Q ss_pred CCCCceeeeeeeEecccccccccccchhhHH
Q 011469 242 NTSKTIINLKGIAIGNAWIDDNLCTKGMFDF 272 (485)
Q Consensus 242 n~~~~~inLkGi~iGNg~id~~~~~~~~~~~ 272 (485)
+.|.+--.+.+....++..+.+.
T Consensus 138 --------~~ga~ASSapv~a~~df~~y~~~ 160 (434)
T PF05577_consen 138 --------FDGAWASSAPVQAKVDFWEYFEV 160 (434)
T ss_dssp ---------SEEEEET--CCHCCTTTHHHHH
T ss_pred --------eEEEEeccceeeeecccHHHHHH
Confidence 77777777777777666665553
No 118
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=84.39 E-value=2.1 Score=41.18 Aligned_cols=58 Identities=16% Similarity=0.287 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccc
Q 011469 198 EDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 261 (485)
Q Consensus 198 ~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id 261 (485)
+++...+.+.++++| +.+++++|||.||-.+..+|..+.++. ...+++.+..|.|-+-
T Consensus 112 ~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~---~~~~i~~~tFg~P~vg 169 (229)
T cd00519 112 NQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG---PGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC---CCCceEEEEeCCCCCC
Confidence 344455555555555 568999999999999988888876552 2345788888877763
No 119
>PLN02571 triacylglycerol lipase
Probab=84.37 E-value=2.6 Score=44.49 Aligned_cols=67 Identities=10% Similarity=0.169 Sum_probs=50.8
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcC-C-----CCceeeeeeeEeccccccc
Q 011469 195 NTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKN-T-----SKTIINLKGIAIGNAWIDD 262 (485)
Q Consensus 195 ~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n-~-----~~~~inLkGi~iGNg~id~ 262 (485)
.+.++++..|+.+++++|.. ..+++|+|||.||-.+--.|..|.... . ....+++..+..|.|-+-.
T Consensus 205 Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN 277 (413)
T PLN02571 205 SARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGD 277 (413)
T ss_pred hHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccC
Confidence 45678889999999998865 347999999999999988888887643 1 1223567778888777653
No 120
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=84.01 E-value=20 Score=36.87 Aligned_cols=123 Identities=24% Similarity=0.311 Sum_probs=71.9
Q ss_pred ceEEEEEEecCCCCCCCCeEEEEcCCCChhh--hhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccc
Q 011469 104 RALFYYFVESPQSSSSKPLVLWLNGGPGCSS--LGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSY 181 (485)
Q Consensus 104 ~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSS--l~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy 181 (485)
--.+.|.. .+ ....+|+|+-++|==|.|. ..-|++.+ +.+ +-..++-.+ =.|-|.+-
T Consensus 61 ~~~ldw~~-~p-~~~~~P~vVl~HGL~G~s~s~y~r~L~~~------------~~~------rg~~~Vv~~-~Rgcs~~~ 119 (345)
T COG0429 61 FIDLDWSE-DP-RAAKKPLVVLFHGLEGSSNSPYARGLMRA------------LSR------RGWLVVVFH-FRGCSGEA 119 (345)
T ss_pred EEEEeecc-Cc-cccCCceEEEEeccCCCCcCHHHHHHHHH------------HHh------cCCeEEEEe-cccccCCc
Confidence 34455543 22 2345599999999555444 22233221 221 124566666 47887775
Q ss_pred cCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccc
Q 011469 182 SNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (485)
Q Consensus 182 ~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~ 259 (485)
.....-|. .++. +|+..||..-.++|| .++||.+|-|.||. .+|..+.+.. ......+++++-+|+
T Consensus 120 n~~p~~yh-~G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg--~d~~~~aa~~vs~P~ 185 (345)
T COG0429 120 NTSPRLYH-SGET---EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEG--DDLPLDAAVAVSAPF 185 (345)
T ss_pred ccCcceec-ccch---hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhc--cCcccceeeeeeCHH
Confidence 43333332 2443 677666655555676 59999999999995 4666666653 223337777777776
No 121
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=82.95 E-value=5.4 Score=44.11 Aligned_cols=133 Identities=22% Similarity=0.255 Sum_probs=76.3
Q ss_pred ceEEEEEEecCC--CC-CCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccc----------cceEE
Q 011469 104 RALFYYFVESPQ--SS-SSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNV----------ANVLF 170 (485)
Q Consensus 104 ~~lFy~f~ea~~--~~-~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~----------anvLf 170 (485)
.-+.|-.+-.++ +| +.-|++|..-||||. .++.|.+.|.+. .=|++
T Consensus 623 g~~lYgmiyKPhn~~pgkkYptvl~VYGGP~V---------------------QlVnnsfkgi~ylR~~~LaslGy~Vv~ 681 (867)
T KOG2281|consen 623 GLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGV---------------------QLVNNSFKGIQYLRFCRLASLGYVVVF 681 (867)
T ss_pred CcEEEEEEEccccCCCCCCCceEEEEcCCCce---------------------EEeeccccceehhhhhhhhhcceEEEE
Confidence 445676665553 23 557999999999985 255566777653 34789
Q ss_pred EeCCCCc---cccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCce
Q 011469 171 LETPAGV---GFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTI 247 (485)
Q Consensus 171 lDqPvGv---GFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~ 247 (485)
||. .|+ |.-+-..-.. ..+. -.++|=.+-|+-.-++.-=..-..+-|-|-||||...-..-.+- +.
T Consensus 682 IDn-RGS~hRGlkFE~~ik~--kmGq-VE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~-------P~ 750 (867)
T KOG2281|consen 682 IDN-RGSAHRGLKFESHIKK--KMGQ-VEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQY-------PN 750 (867)
T ss_pred EcC-CCccccchhhHHHHhh--ccCe-eeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcC-------cc
Confidence 996 665 2222110000 0121 12455555565444543212334789999999997554433221 12
Q ss_pred eeeeeeEecccccccccccchh
Q 011469 248 INLKGIAIGNAWIDDNLCTKGM 269 (485)
Q Consensus 248 inLkGi~iGNg~id~~~~~~~~ 269 (485)
| ++--+-|.|+++...-..+|
T Consensus 751 I-frvAIAGapVT~W~~YDTgY 771 (867)
T KOG2281|consen 751 I-FRVAIAGAPVTDWRLYDTGY 771 (867)
T ss_pred e-eeEEeccCcceeeeeecccc
Confidence 2 77778888998876433333
No 122
>COG0627 Predicted esterase [General function prediction only]
Probab=82.95 E-value=4.6 Score=41.33 Aligned_cols=130 Identities=20% Similarity=0.200 Sum_probs=72.9
Q ss_pred CCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCcc---ccCccCcccccceEEEeCCCCccccccCCC-CCCCCCCC
Q 011469 118 SSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTL---YRNEYAWNNVANVLFLETPAGVGFSYSNTS-SDYSNPGD 193 (485)
Q Consensus 118 ~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l---~~N~~sWn~~anvLflDqPvGvGFSy~~~~-~~~~~~~d 193 (485)
..+--|+|+.+|..|..- .+.+.++++-..+...+ .+.-.-+...-++--|+ |+|.|.|+-.+. .... ..
T Consensus 51 ~~~ipV~~~l~G~t~~~~---~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~--~~ 124 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEP---NVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPW--AS 124 (316)
T ss_pred CCCCCEEEEeCCCCCCCC---ceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCcc--cc
Confidence 344556666677898841 22334444332222111 11122344555666667 699999984432 2111 11
Q ss_pred hhhHHHHHHHHH-----HHHHHCCCCCC-CCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccccc
Q 011469 194 NNTAEDSYTFLV-----NWFERFPQYKN-RDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (485)
Q Consensus 194 ~~~A~d~~~fL~-----~f~~~fPey~~-~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~ 263 (485)
. ..+.+.||. .|.+.||--++ ..-.|+|+|+||+=+-.+|.+-.++ ++.+.=-.|+++|.
T Consensus 125 ~--~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~--------f~~~sS~Sg~~~~s 190 (316)
T COG0627 125 G--PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDR--------FKSASSFSGILSPS 190 (316)
T ss_pred C--ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcch--------hceecccccccccc
Confidence 1 245555554 45567773332 2578999999999888888776544 56665556666654
No 123
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=82.78 E-value=4.5 Score=46.31 Aligned_cols=99 Identities=13% Similarity=0.127 Sum_probs=59.2
Q ss_pred CCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCcccc-ccCC--------CC--C
Q 011469 119 SKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFS-YSNT--------SS--D 187 (485)
Q Consensus 119 ~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFS-y~~~--------~~--~ 187 (485)
..|+|+++||=.|.... +-.+.+ .+. .+-..|+-+|. +|.|-| ...+ .. .
T Consensus 448 g~P~VVllHG~~g~~~~-~~~lA~-----------~La------~~Gy~VIaiDl-pGHG~S~~~~~~~~~~a~~~~~~~ 508 (792)
T TIGR03502 448 GWPVVIYQHGITGAKEN-ALAFAG-----------TLA------AAGVATIAIDH-PLHGARSFDANASGVNATNANVLA 508 (792)
T ss_pred CCcEEEEeCCCCCCHHH-HHHHHH-----------HHH------hCCcEEEEeCC-CCCCccccccccccccccccCccc
Confidence 35899999996665554 222221 011 02345788885 588877 3211 11 1
Q ss_pred CC--------CCCChhhHHHHHHHHHHHHH----------HCCCCCCCCeEEEeccccccchHHHHHH
Q 011469 188 YS--------NPGDNNTAEDSYTFLVNWFE----------RFPQYKNRDFFITGESYAGHYVPQLAYT 237 (485)
Q Consensus 188 ~~--------~~~d~~~A~d~~~fL~~f~~----------~fPey~~~~~yI~GESYgG~YvP~lA~~ 237 (485)
|- +.+.++...|++.... .+. .+..+...++++.|||.||..+..++..
T Consensus 509 y~Nl~~l~~aRDn~rQ~v~Dll~L~~-~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 509 YMNLASLLVARDNLRQSILDLLGLRL-SLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred eeccccccccccCHHHHHHHHHHHHH-HHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 11 0144677788877443 333 2334667899999999999999888843
No 124
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=82.69 E-value=1.7 Score=41.59 Aligned_cols=63 Identities=13% Similarity=0.167 Sum_probs=43.5
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccc
Q 011469 196 TAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 261 (485)
Q Consensus 196 ~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id 261 (485)
.-.|+..+...|++.+++ +|||+|+|||=|+..+-.|-+...+.+.-..+ -+..++||-++..
T Consensus 76 ay~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL~e~~~~~pl~~r-LVAAYliG~~v~~ 138 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLLKEEIAGDPLRKR-LVAAYLIGYPVTV 138 (207)
T ss_pred hHHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHHHHHhcCchHHhh-hheeeecCccccH
Confidence 456888999999999874 89999999999999877776655443200001 1556666655543
No 125
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=82.39 E-value=3 Score=44.60 Aligned_cols=41 Identities=15% Similarity=0.075 Sum_probs=31.5
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHH
Q 011469 194 NNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYT 237 (485)
Q Consensus 194 ~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~ 237 (485)
++..+++.+.+.+.+++.+ .+++.|.|||+||-++-.++..
T Consensus 142 ~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 142 PETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHHH
Confidence 4556777777777777653 5799999999999887776654
No 126
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=82.27 E-value=7.2 Score=47.15 Aligned_cols=102 Identities=10% Similarity=0.175 Sum_probs=64.3
Q ss_pred CCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCCCCCCCCCChhhHHH
Q 011469 120 KPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAED 199 (485)
Q Consensus 120 ~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d 199 (485)
.|-++.++|+.|.+.. |..+.+ .......|+-+|.| |.|-+ .. .. .+.++.|++
T Consensus 1068 ~~~l~~lh~~~g~~~~-~~~l~~------------------~l~~~~~v~~~~~~-g~~~~--~~-~~---~~l~~la~~ 1121 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQ-FSVLSR------------------YLDPQWSIYGIQSP-RPDGP--MQ-TA---TSLDEVCEA 1121 (1296)
T ss_pred CCCeEEecCCCCchHH-HHHHHH------------------hcCCCCcEEEEECC-CCCCC--CC-CC---CCHHHHHHH
Confidence 4667888888776555 443332 11234677888875 55533 11 11 255677777
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccc
Q 011469 200 SYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNA 258 (485)
Q Consensus 200 ~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg 258 (485)
....++. ..| ..+++|.|+|+||..+-.+|.++.++ ...+..+++.++
T Consensus 1122 ~~~~i~~---~~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~-----~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1122 HLATLLE---QQP---HGPYHLLGYSLGGTLAQGIAARLRAR-----GEEVAFLGLLDT 1169 (1296)
T ss_pred HHHHHHh---hCC---CCCEEEEEechhhHHHHHHHHHHHHc-----CCceeEEEEecC
Confidence 7666653 222 35899999999999999999887665 234556655554
No 127
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=82.04 E-value=1.4 Score=41.54 Aligned_cols=51 Identities=22% Similarity=0.253 Sum_probs=36.3
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccccccc
Q 011469 201 YTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLC 265 (485)
Q Consensus 201 ~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~~~ 265 (485)
.+.+.+.++.. ....+.|.|-|.||.|+-.+|.+. +++. ++.||.+.|...
T Consensus 46 ~~~l~~~i~~~---~~~~~~liGSSlGG~~A~~La~~~----------~~~a-vLiNPav~p~~~ 96 (187)
T PF05728_consen 46 IAQLEQLIEEL---KPENVVLIGSSLGGFYATYLAERY----------GLPA-VLINPAVRPYEL 96 (187)
T ss_pred HHHHHHHHHhC---CCCCeEEEEEChHHHHHHHHHHHh----------CCCE-EEEcCCCCHHHH
Confidence 34444444443 445699999999999999999765 2666 566999888643
No 128
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=81.79 E-value=12 Score=39.63 Aligned_cols=54 Identities=9% Similarity=0.021 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHH-CCCCC-CCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccc
Q 011469 198 EDSYTFLVNWFER-FPQYK-NRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (485)
Q Consensus 198 ~d~~~fL~~f~~~-fPey~-~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~ 259 (485)
+.+.+=|.-|+++ |+--. ..+..|+|.||||.-.-.+|.+-.+. +.+++...|-
T Consensus 267 ~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~--------Fg~v~s~Sgs 322 (411)
T PRK10439 267 LAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPER--------FGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCccc--------ccEEEEeccc
Confidence 3333334445543 43222 34689999999999888887665554 6777776654
No 129
>PRK04940 hypothetical protein; Provisional
Probab=80.16 E-value=2.2 Score=40.04 Aligned_cols=38 Identities=11% Similarity=0.226 Sum_probs=31.0
Q ss_pred CCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccccccc
Q 011469 217 RDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLC 265 (485)
Q Consensus 217 ~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~~~ 265 (485)
+++.|.|.|.||.|+..||.+. .++.|+| ||.+.|...
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~----------g~~aVLi-NPAv~P~~~ 97 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC----------GIRQVIF-NPNLFPEEN 97 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH----------CCCEEEE-CCCCChHHH
Confidence 4789999999999999999864 2676654 999999653
No 130
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=79.76 E-value=4 Score=41.94 Aligned_cols=61 Identities=25% Similarity=0.326 Sum_probs=42.9
Q ss_pred cccceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCC-CCCCCCeEEEeccccccchHH
Q 011469 164 NVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFP-QYKNRDFFITGESYAGHYVPQ 233 (485)
Q Consensus 164 ~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP-ey~~~~~yI~GESYgG~YvP~ 233 (485)
..+|||..- .+|||+|.+.. +-++..+| ++.+.++++..+ .-+.+.+.+.|+|-||-....
T Consensus 170 ~~aNvl~fN-YpGVg~S~G~~-------s~~dLv~~-~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~ 231 (365)
T PF05677_consen 170 LGANVLVFN-YPGVGSSTGPP-------SRKDLVKD-YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAE 231 (365)
T ss_pred cCCcEEEEC-CCccccCCCCC-------CHHHHHHH-HHHHHHHHHhcccCCChheEEEeeccccHHHHHH
Confidence 468999999 68999997653 22344444 445667776543 346789999999999976544
No 131
>PLN02753 triacylglycerol lipase
Probab=79.56 E-value=4.6 Score=43.85 Aligned_cols=71 Identities=17% Similarity=0.211 Sum_probs=52.3
Q ss_pred CChhhHHHHHHHHHHHHHHCCC--CCCCCeEEEeccccccchHHHHHHHHHcC----CCCceeeeeeeEeccccccc
Q 011469 192 GDNNTAEDSYTFLVNWFERFPQ--YKNRDFFITGESYAGHYVPQLAYTILSKN----TSKTIINLKGIAIGNAWIDD 262 (485)
Q Consensus 192 ~d~~~A~d~~~fL~~f~~~fPe--y~~~~~yI~GESYgG~YvP~lA~~I~~~n----~~~~~inLkGi~iGNg~id~ 262 (485)
+...+.+++...++..++.+|. +....++|+|||.||-.+--.|..|.+.. .....+++.-+..|.|-+..
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN 361 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGN 361 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccC
Confidence 3346788899999999988863 34568999999999999999998887643 11234556677777776643
No 132
>PLN02719 triacylglycerol lipase
Probab=78.17 E-value=4.8 Score=43.57 Aligned_cols=69 Identities=17% Similarity=0.273 Sum_probs=51.2
Q ss_pred hhhHHHHHHHHHHHHHHCCCC--CCCCeEEEeccccccchHHHHHHHHHcC-C---CCceeeeeeeEeccccccc
Q 011469 194 NNTAEDSYTFLVNWFERFPQY--KNRDFFITGESYAGHYVPQLAYTILSKN-T---SKTIINLKGIAIGNAWIDD 262 (485)
Q Consensus 194 ~~~A~d~~~fL~~f~~~fPey--~~~~~yI~GESYgG~YvP~lA~~I~~~n-~---~~~~inLkGi~iGNg~id~ 262 (485)
..+.+++...|++.++.+|.+ ....++|+|||.||-.+--.|..|.+.. . ....+++.-+..|.|-+..
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN 347 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGN 347 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccC
Confidence 356778999999999999865 3457999999999999999998887753 1 1223456667777776543
No 133
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=77.92 E-value=9.9 Score=30.41 Aligned_cols=79 Identities=22% Similarity=0.244 Sum_probs=49.7
Q ss_pred CceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCcccccc
Q 011469 103 GRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYS 182 (485)
Q Consensus 103 ~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~ 182 (485)
|..||+..++.+.. .+.+|+.++|--..|.. |..+.+ .|.. +-.+|+-.|+ .|.|.|-.
T Consensus 1 G~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~r-y~~~a~-----------~L~~------~G~~V~~~D~-rGhG~S~g 59 (79)
T PF12146_consen 1 GTKLFYRRWKPENP--PKAVVVIVHGFGEHSGR-YAHLAE-----------FLAE------QGYAVFAYDH-RGHGRSEG 59 (79)
T ss_pred CcEEEEEEecCCCC--CCEEEEEeCCcHHHHHH-HHHHHH-----------HHHh------CCCEEEEECC-CcCCCCCC
Confidence 35688877766433 68889888886444433 444432 1222 3457899996 89999975
Q ss_pred CCCCCCCCCCChhhHHHHHHHHH
Q 011469 183 NTSSDYSNPGDNNTAEDSYTFLV 205 (485)
Q Consensus 183 ~~~~~~~~~~d~~~A~d~~~fL~ 205 (485)
... +. .+-++..+|+..|++
T Consensus 60 ~rg--~~-~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 60 KRG--HI-DSFDDYVDDLHQFIQ 79 (79)
T ss_pred ccc--cc-CCHHHHHHHHHHHhC
Confidence 432 22 255677888777653
No 134
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=77.70 E-value=0.44 Score=49.01 Aligned_cols=105 Identities=16% Similarity=0.230 Sum_probs=59.0
Q ss_pred CCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcc-cccceEEEeCCCCccccccCCCCCCCCCCChh
Q 011469 117 SSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWN-NVANVLFLETPAGVGFSYSNTSSDYSNPGDNN 195 (485)
Q Consensus 117 ~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn-~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~ 195 (485)
..++|++|.++|=-+..+.. ..+. .+..+-+... .-.|||.||--.|..-.|.... .+...
T Consensus 68 n~~~pt~iiiHGw~~~~~~~-~~~~------------~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~-----~n~~~ 129 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSE-SWIQ------------DMIKALLQKDTGDYNVIVVDWSRGASNNYPQAV-----ANTRL 129 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TT-THHH------------HHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHH-----HHHHH
T ss_pred CCCCCeEEEEcCcCCcccch-hHHH------------HHHHHHHhhccCCceEEEEcchhhccccccchh-----hhHHH
Confidence 36789999999933322110 0111 1222222221 4689999997666555453311 13456
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHH
Q 011469 196 TAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILS 240 (485)
Q Consensus 196 ~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~ 240 (485)
+++.+-.||+...+.+ .+...+++|.|+|.|+|.+-..++++..
T Consensus 130 vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 130 VGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp HHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 7777777777666443 2445789999999999999988888755
No 135
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=76.64 E-value=4.4 Score=42.61 Aligned_cols=60 Identities=18% Similarity=0.174 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHHHHHHCCCCCC-CCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccccc
Q 011469 195 NTAEDSYTFLVNWFERFPQYKN-RDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (485)
Q Consensus 195 ~~A~d~~~fL~~f~~~fPey~~-~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~ 262 (485)
..|.|...+|..-.++||..++ .|..+.|.||||. ...|+.+|.=. .+.||+=-.++.-|
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~y-la~l~~k~aP~-------~~~~~iDns~~~~p 221 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGY-LAHLCAKIAPW-------LFDGVIDNSSYALP 221 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHH-HHHHHHhhCcc-------ceeEEEecCccccc
Confidence 5789999999999999999986 7999999999985 44555555322 25666554444443
No 136
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=75.67 E-value=1.8 Score=41.44 Aligned_cols=72 Identities=15% Similarity=0.063 Sum_probs=50.9
Q ss_pred CCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeE
Q 011469 175 AGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIA 254 (485)
Q Consensus 175 vGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~ 254 (485)
+-|||-+++... +-+++..|+..+++=-|+.+|.-+ .+-+.|||-|.|.+.+...++..- .+.|++
T Consensus 101 asvgY~l~~q~h-----tL~qt~~~~~~gv~filk~~~n~k--~l~~gGHSaGAHLa~qav~R~r~p-------rI~gl~ 166 (270)
T KOG4627|consen 101 ASVGYNLCPQVH-----TLEQTMTQFTHGVNFILKYTENTK--VLTFGGHSAGAHLAAQAVMRQRSP-------RIWGLI 166 (270)
T ss_pred EEeccCcCcccc-----cHHHHHHHHHHHHHHHHHhcccce--eEEEcccchHHHHHHHHHHHhcCc-------hHHHHH
Confidence 557888876432 667899999998876677777544 499999999999877766664322 256666
Q ss_pred eccccc
Q 011469 255 IGNAWI 260 (485)
Q Consensus 255 iGNg~i 260 (485)
+-.|+-
T Consensus 167 l~~GvY 172 (270)
T KOG4627|consen 167 LLCGVY 172 (270)
T ss_pred HHhhHh
Confidence 655553
No 137
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=74.54 E-value=19 Score=34.81 Aligned_cols=37 Identities=19% Similarity=0.180 Sum_probs=24.6
Q ss_pred hhHHHHHHHHHHHHHHC--CCCCCCCeEEEeccccccch
Q 011469 195 NTAEDSYTFLVNWFERF--PQYKNRDFFITGESYAGHYV 231 (485)
Q Consensus 195 ~~A~d~~~fL~~f~~~f--Pey~~~~~yI~GESYgG~Yv 231 (485)
+.++.+-+.++..++.. ..-..+++.|.|||+||.-+
T Consensus 61 ~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlva 99 (225)
T PF07819_consen 61 RQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVA 99 (225)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHH
Confidence 44555555555555544 22357899999999999733
No 138
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=74.35 E-value=33 Score=34.54 Aligned_cols=90 Identities=13% Similarity=0.043 Sum_probs=53.7
Q ss_pred hHHHHHHhhcCcEEEEEecCCccccCchhHHHHHHHcCCCCCcccccccc--CCccceEEEee---cceEEEEEcCCCcc
Q 011469 386 LPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYA--DGEVGGYVLGY---KGVIFTTVRGAGHL 460 (485)
Q Consensus 386 ~~~l~~Ll~~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~--~~~v~Gy~~~y---~~Ltf~~V~gAGHm 460 (485)
.+.++.|-+..+||+|.-|-.|.++--.-.+..+... .+.+.+.--.. +.+.---.+.+ ..-.-+.|..-||.
T Consensus 202 ~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f--~~l~Hf~~~~~~seee~~kI~~~f~~~~~~~sv~f~~dgHf 279 (297)
T PF06342_consen 202 KEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF--KGLDHFNIEKEISEEEKPKILKSFASGQKGASVFFAKDGHF 279 (297)
T ss_pred HHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh--CCccceeeecCCChhHHHHHHHHHhcCCceeEEEEecCChH
Confidence 4667777777899999999999988766666665543 22111111000 00000000111 12245778899999
Q ss_pred CCccChHHHHHHHHHHH
Q 011469 461 VPTYQPQRALIMISSFL 477 (485)
Q Consensus 461 VP~dqP~~al~l~~~fl 477 (485)
..-.||+-.-+.+.+.+
T Consensus 280 ~qK~~A~lIA~~i~~mf 296 (297)
T PF06342_consen 280 QQKFRADLIAEAIKKMF 296 (297)
T ss_pred HhHHHHHHHHHHHHHhh
Confidence 99999987777776654
No 139
>PLN02761 lipase class 3 family protein
Probab=72.43 E-value=9.3 Score=41.52 Aligned_cols=69 Identities=14% Similarity=0.161 Sum_probs=49.9
Q ss_pred hhhHHHHHHHHHHHHHHCCCC-C--CCCeEEEeccccccchHHHHHHHHHcC-C----CCceeeeeeeEeccccccc
Q 011469 194 NNTAEDSYTFLVNWFERFPQY-K--NRDFFITGESYAGHYVPQLAYTILSKN-T----SKTIINLKGIAIGNAWIDD 262 (485)
Q Consensus 194 ~~~A~d~~~fL~~f~~~fPey-~--~~~~yI~GESYgG~YvP~lA~~I~~~n-~----~~~~inLkGi~iGNg~id~ 262 (485)
..+.+++...++..++.+|.. + ...++|+|||.||-.+--.|..|...+ . ....+++.-+..|.|=+..
T Consensus 268 ~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN 344 (527)
T PLN02761 268 FSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGN 344 (527)
T ss_pred hhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCC
Confidence 356788999999998888643 2 346999999999999998888887643 1 1234566677777666543
No 140
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=70.81 E-value=16 Score=33.24 Aligned_cols=77 Identities=17% Similarity=0.219 Sum_probs=46.7
Q ss_pred cccceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCC
Q 011469 164 NVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNT 243 (485)
Q Consensus 164 ~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~ 243 (485)
...+++.+|.| |.|.+-.. . .+.+..+++....+. ...+ ..++.++|+|+||..+-.+|..+.++.
T Consensus 24 ~~~~v~~~~~~-g~~~~~~~-----~-~~~~~~~~~~~~~l~---~~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~- 89 (212)
T smart00824 24 GRRDVSALPLP-GFGPGEPL-----P-ASADALVEAQAEAVL---RAAG---GRPFVLVGHSSGGLLAHAVAARLEARG- 89 (212)
T ss_pred CCccEEEecCC-CCCCCCCC-----C-CCHHHHHHHHHHHHH---HhcC---CCCeEEEEECHHHHHHHHHHHHHHhCC-
Confidence 34678889854 55543211 1 133344444444333 2333 568999999999999999998877652
Q ss_pred CCceeeeeeeEeccc
Q 011469 244 SKTIINLKGIAIGNA 258 (485)
Q Consensus 244 ~~~~inLkGi~iGNg 258 (485)
..++++++.+.
T Consensus 90 ----~~~~~l~~~~~ 100 (212)
T smart00824 90 ----IPPAAVVLLDT 100 (212)
T ss_pred ----CCCcEEEEEcc
Confidence 23566655444
No 141
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=70.54 E-value=7.8 Score=37.58 Aligned_cols=39 Identities=18% Similarity=0.376 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHH
Q 011469 198 EDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILS 240 (485)
Q Consensus 198 ~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~ 240 (485)
+...++|.+..+.+++ +++|+|||-||..+-+.|..+.+
T Consensus 69 ~~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~ 107 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDD 107 (224)
T ss_pred HHHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccH
Confidence 4556777777777754 69999999999999888877543
No 142
>KOG3101 consensus Esterase D [General function prediction only]
Probab=70.06 E-value=29 Score=33.54 Aligned_cols=156 Identities=14% Similarity=0.143 Sum_probs=75.8
Q ss_pred ceeEeeeEEecC----CCCceEEEEEEecCCCC--CCCCeEEEEcCCCChhhhh-------hhhhhhcCCeEEcCCCC--
Q 011469 89 FDQYAGYLTVDP----KAGRALFYYFVESPQSS--SSKPLVLWLNGGPGCSSLG-------YGAMEELGPFRVNSDGK-- 153 (485)
Q Consensus 89 ~~~ysGyv~v~~----~~~~~lFy~f~ea~~~~--~~~PlvLWLnGGPGcSSl~-------~G~~~E~GP~~v~~~~~-- 153 (485)
.+.+-|+.-|-. +.+-.|=|-.|-.+..+ +.-|++.||.|= -|.--. --.-.+.|=..|.+|..
T Consensus 7 nk~f~G~q~vy~H~S~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSGL-TCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPR 85 (283)
T KOG3101|consen 7 NKCFGGRQKVYKHNSNTLKCSMTFGVYLPPDAPRGKRCPVLFYLSGL-TCTHENFIEKSGFQQQASKHGLAVVAPDTSPR 85 (283)
T ss_pred cccccceeeeeeccccccccceEEEEecCCCcccCCcCceEEEecCC-cccchhhHhhhhHHHhHhhcCeEEECCCCCCC
Confidence 466777777743 22345666544333333 445999999874 554321 01112455555666531
Q ss_pred --ccccCccCcccccceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHH-HCCCCCCCCeEEEeccccccc
Q 011469 154 --TLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFE-RFPQYKNRDFFITGESYAGHY 230 (485)
Q Consensus 154 --~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~-~fPey~~~~~yI~GESYgG~Y 230 (485)
.+.-.+.|| |==.|.||= .+.+.+-. ...-+.-+.+.+=|-+-+. .+-..-..+.-|+|||+|||=
T Consensus 86 G~~v~g~~esw---------DFG~GAGFY-vnAt~epw-~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhG 154 (283)
T KOG3101|consen 86 GVEVAGDDESW---------DFGQGAGFY-VNATQEPW-AKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHG 154 (283)
T ss_pred ccccCCCcccc---------cccCCceeE-EecccchH-hhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCc
Confidence 122233455 333555663 33332111 0111222222222322222 222233456899999999995
Q ss_pred hHHHHHHHHHcCCCCceeeeeeeEeccccccccc
Q 011469 231 VPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNL 264 (485)
Q Consensus 231 vP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~~ 264 (485)
+-.++.+-. -..|++.--.|..+|..
T Consensus 155 Al~~~Lkn~--------~kykSvSAFAPI~NP~~ 180 (283)
T KOG3101|consen 155 ALTIYLKNP--------SKYKSVSAFAPICNPIN 180 (283)
T ss_pred eEEEEEcCc--------ccccceeccccccCccc
Confidence 544443221 13566666666666654
No 143
>PLN02408 phospholipase A1
Probab=69.08 E-value=12 Score=39.03 Aligned_cols=64 Identities=16% Similarity=0.173 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccc
Q 011469 195 NTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 261 (485)
Q Consensus 195 ~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id 261 (485)
...+++.+-+++.++.+|.. ...++|+|||.||-.+--.|..|.......+ .+.-+..|.|-+.
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~--~V~v~tFGsPRVG 242 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTTFKRAP--MVTVISFGGPRVG 242 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHhcCCCC--ceEEEEcCCCCcc
Confidence 56677888899999988865 3469999999999999888888866421111 2445555555543
No 144
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=67.74 E-value=1.2e+02 Score=33.74 Aligned_cols=41 Identities=17% Similarity=0.159 Sum_probs=32.8
Q ss_pred ccccCcccccCCCCCchHHHHHHhhcCcEEEEEecCCccccCchhHHHHHHHcC
Q 011469 370 WSTCSDLTWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALN 423 (485)
Q Consensus 370 w~~cs~~v~~d~~~s~~~~l~~Ll~~girVlIysGd~D~i~p~~gt~~~i~~L~ 423 (485)
++.|...| .|-+-..+++++.|..|.|+|+.++....+.+.
T Consensus 428 l~v~G~~i-------------dL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~g 468 (560)
T TIGR01839 428 LEVCGTPI-------------DLKKVKCDSFSVAGTNDHITPWDAVYRSALLLG 468 (560)
T ss_pred EEECCEEe-------------chhcCCCCeEEEecCcCCcCCHHHHHHHHHHcC
Confidence 67776655 333346999999999999999999998888765
No 145
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=65.45 E-value=13 Score=35.76 Aligned_cols=56 Identities=18% Similarity=0.114 Sum_probs=40.7
Q ss_pred HHHHHHHHHHH-HCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccccc
Q 011469 199 DSYTFLVNWFE-RFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (485)
Q Consensus 199 d~~~fL~~f~~-~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~ 263 (485)
.+.+=|..|++ +|+-...+ .+|+|.|+||.-+-.+|.+-.+. +.+++.-.|.+++.
T Consensus 97 ~l~~el~p~i~~~~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd~--------F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDR-RAIAGHSMGGYGALYLALRHPDL--------FGAVIAFSGALDPS 153 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECC-EEEEEETHHHHHHHHHHHHSTTT--------ESEEEEESEESETT
T ss_pred ehhccchhHHHHhcccccce-eEEeccCCCcHHHHHHHHhCccc--------cccccccCcccccc
Confidence 33344555655 45544444 89999999999888888776665 88999888887765
No 146
>PLN02934 triacylglycerol lipase
Probab=64.40 E-value=14 Score=40.08 Aligned_cols=40 Identities=15% Similarity=0.248 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHc
Q 011469 199 DSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSK 241 (485)
Q Consensus 199 d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~ 241 (485)
.+..-|+++++.+|. .+++++|||.||-.+--.|..+..+
T Consensus 306 ~v~~~lk~ll~~~p~---~kIvVTGHSLGGALAtLaA~~L~l~ 345 (515)
T PLN02934 306 AVRSKLKSLLKEHKN---AKFVVTGHSLGGALAILFPTVLVLQ 345 (515)
T ss_pred HHHHHHHHHHHHCCC---CeEEEeccccHHHHHHHHHHHHHHh
Confidence 466777888888876 4699999999999988887666543
No 147
>PLN02802 triacylglycerol lipase
Probab=64.27 E-value=14 Score=40.09 Aligned_cols=64 Identities=11% Similarity=0.114 Sum_probs=45.5
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccc
Q 011469 195 NTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 261 (485)
Q Consensus 195 ~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id 261 (485)
.+.+++..-++++++.+|.. ...++|+|||.||-.+--.|..|...... .+.+..+..|.|-+.
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~~--~~pV~vyTFGsPRVG 372 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVPA--APPVAVFSFGGPRVG 372 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCCC--CCceEEEEcCCCCcc
Confidence 45678888888888887643 24799999999999998888888665311 123555666666554
No 148
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=63.88 E-value=15 Score=35.37 Aligned_cols=62 Identities=26% Similarity=0.327 Sum_probs=48.7
Q ss_pred cEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChH---HHHHHH
Q 011469 397 IRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQ---RALIMI 473 (485)
Q Consensus 397 irVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~---~al~l~ 473 (485)
.++++.+|..|.++|....+...+...= ....+..+.+++|....+.+. .++.-+
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~----------------------~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 290 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARE----------------------RPKKLLFVPGGGHIDLYDNPPAVEQALDKL 290 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhcc----------------------CCceEEEecCCccccccCccHHHHHHHHHH
Confidence 8999999999999999888887776541 135788999999999986655 677777
Q ss_pred HHHHcCC
Q 011469 474 SSFLEGK 480 (485)
Q Consensus 474 ~~fl~g~ 480 (485)
..|+...
T Consensus 291 ~~f~~~~ 297 (299)
T COG1073 291 AEFLERH 297 (299)
T ss_pred HHHHHHh
Confidence 7777543
No 149
>PLN02324 triacylglycerol lipase
Probab=63.33 E-value=17 Score=38.55 Aligned_cols=68 Identities=18% Similarity=0.172 Sum_probs=48.0
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcC--C-----CCceeeeeeeEeccccccc
Q 011469 194 NNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKN--T-----SKTIINLKGIAIGNAWIDD 262 (485)
Q Consensus 194 ~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n--~-----~~~~inLkGi~iGNg~id~ 262 (485)
..+.+++..-|++.++.+|.. ...++|+|||.||-.+.-.|..|.+.. . ....+++.-+..|.|-+..
T Consensus 193 ~SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVGN 267 (415)
T PLN02324 193 TSAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIGD 267 (415)
T ss_pred hHHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcCC
Confidence 356677888899998888753 247999999999999998888887642 0 0123455566666665543
No 150
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=62.59 E-value=11 Score=34.79 Aligned_cols=42 Identities=19% Similarity=0.321 Sum_probs=34.8
Q ss_pred cEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCc
Q 011469 397 IRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPT 463 (485)
Q Consensus 397 irVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~ 463 (485)
++.+++..+.|..||+.-++.+.+.++ ..|+.+.++||+-..
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l~-------------------------a~~~~~~~~GHf~~~ 156 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRLG-------------------------AELIILGGGGHFNAA 156 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHHT--------------------------EEEEETS-TTSSGG
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHcC-------------------------CCeEECCCCCCcccc
Confidence 566999999999999999999999876 378999999999765
No 151
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=62.49 E-value=11 Score=36.19 Aligned_cols=49 Identities=14% Similarity=0.112 Sum_probs=37.7
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHc
Q 011469 192 GDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSK 241 (485)
Q Consensus 192 ~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~ 241 (485)
+.+..|+.+.+.|.+.++..+.- .+++.+.|||.||.++-.....+.+.
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~ 102 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDK 102 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhc
Confidence 55667888888888887776542 57999999999999998776666655
No 152
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=62.45 E-value=7 Score=37.06 Aligned_cols=60 Identities=23% Similarity=0.286 Sum_probs=43.2
Q ss_pred CCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHc
Q 011469 174 PAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSK 241 (485)
Q Consensus 174 PvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~ 241 (485)
=.|||-|-+.-.... ++.+.|....++|+ .++|+-+ .+.++|-|+|+..+.++|.+..+.
T Consensus 68 fRgVG~S~G~fD~Gi---GE~~Da~aaldW~~---~~hp~s~--~~~l~GfSFGa~Ia~~la~r~~e~ 127 (210)
T COG2945 68 FRGVGRSQGEFDNGI---GELEDAAAALDWLQ---ARHPDSA--SCWLAGFSFGAYIAMQLAMRRPEI 127 (210)
T ss_pred ccccccccCcccCCc---chHHHHHHHHHHHH---hhCCCch--hhhhcccchHHHHHHHHHHhcccc
Confidence 489999987654432 55555555555554 5788754 379999999999999999887554
No 153
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=62.00 E-value=15 Score=36.96 Aligned_cols=37 Identities=14% Similarity=0.304 Sum_probs=29.1
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccc
Q 011469 194 NNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHY 230 (485)
Q Consensus 194 ~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~Y 230 (485)
.++|+.+++.+.......|+=..=++|++|||.|..=
T Consensus 86 ~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g 122 (289)
T PF10081_consen 86 REAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYG 122 (289)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccc
Confidence 4677778888888888888765556999999987653
No 154
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=61.44 E-value=10 Score=36.27 Aligned_cols=47 Identities=15% Similarity=0.235 Sum_probs=36.4
Q ss_pred HHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccc
Q 011469 204 LVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (485)
Q Consensus 204 L~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~ 259 (485)
-.+|++.+|+...+++-|.|-|.||-++-.+|.+.. .++.++..+|.
T Consensus 9 Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~---------~i~avVa~~ps 55 (213)
T PF08840_consen 9 AIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP---------QISAVVAISPS 55 (213)
T ss_dssp HHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS---------SEEEEEEES--
T ss_pred HHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC---------CccEEEEeCCc
Confidence 456888999999899999999999999999998764 27888776665
No 155
>PLN00413 triacylglycerol lipase
Probab=61.44 E-value=9.3 Score=41.07 Aligned_cols=39 Identities=18% Similarity=0.374 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHH
Q 011469 199 DSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILS 240 (485)
Q Consensus 199 d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~ 240 (485)
++..-|++.++.+|+ .+++|+|||.||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p~---~kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNPT---SKFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCCC---CeEEEEecCHHHHHHHHHHHHHHh
Confidence 566778888888875 469999999999999888876644
No 156
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=61.42 E-value=2.3e+02 Score=30.18 Aligned_cols=57 Identities=9% Similarity=0.120 Sum_probs=41.0
Q ss_pred HHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccccccc
Q 011469 202 TFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLC 265 (485)
Q Consensus 202 ~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~~~ 265 (485)
++|.+|++.- +.++++.|-+-||..+-..+..+.+.+ . +-..+++.+-.+-||....
T Consensus 157 ~~l~~~i~~~----G~~v~l~GvCqgG~~~laa~Al~a~~~--~-p~~~~sltlm~~PID~~~~ 213 (406)
T TIGR01849 157 DYLIEFIRFL----GPDIHVIAVCQPAVPVLAAVALMAENE--P-PAQPRSMTLMGGPIDARAS 213 (406)
T ss_pred HHHHHHHHHh----CCCCcEEEEchhhHHHHHHHHHHHhcC--C-CCCcceEEEEecCccCCCC
Confidence 5677777544 556999999999998887777776653 1 1237887877777887643
No 157
>PLN02310 triacylglycerol lipase
Probab=61.32 E-value=17 Score=38.42 Aligned_cols=64 Identities=14% Similarity=0.154 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHHHHHHCCC-CCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccc
Q 011469 195 NTAEDSYTFLVNWFERFPQ-YKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 261 (485)
Q Consensus 195 ~~A~d~~~fL~~f~~~fPe-y~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id 261 (485)
.+.+++..-+++.++.+++ -....+.|+|||.||-.+--.|..|.... +.+++.-+..|.|-+.
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~---~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI---PDLFVSVISFGAPRVG 250 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC---cCcceeEEEecCCCcc
Confidence 3556677777777776653 22457999999999999988887775532 2344556666766664
No 158
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=61.09 E-value=16 Score=37.75 Aligned_cols=59 Identities=22% Similarity=0.310 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccc
Q 011469 198 EDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (485)
Q Consensus 198 ~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~i 260 (485)
..+.+-++.-++.+| +..++++|||.||-++...|..|..... ....+++-+-.|-|-+
T Consensus 155 ~~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~-~~~~~v~v~tFG~PRv 213 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGL-KTSSPVKVYTFGQPRV 213 (336)
T ss_pred HHHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCC-CCCCceEEEEecCCCc
Confidence 334444555556666 5689999999999999999999988751 1234455555555544
No 159
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=59.61 E-value=23 Score=34.27 Aligned_cols=58 Identities=24% Similarity=0.315 Sum_probs=43.9
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccCh--HHHHHHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQP--QRALIMI 473 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP--~~al~l~ 473 (485)
.++-|-+-|+.|.++|..-++..++... +- .+...-.||+||.-.| +.+...|
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~------------------------~a-~vl~HpggH~VP~~~~~~~~i~~fi 217 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFK------------------------DA-TVLEHPGGHIVPNKAKYKEKIADFI 217 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcC------------------------CC-eEEecCCCccCCCchHHHHHHHHHH
Confidence 5889999999999999998888877743 22 5788899999998664 4455555
Q ss_pred HHHHc
Q 011469 474 SSFLE 478 (485)
Q Consensus 474 ~~fl~ 478 (485)
..++.
T Consensus 218 ~~~~~ 222 (230)
T KOG2551|consen 218 QSFLQ 222 (230)
T ss_pred HHHHH
Confidence 55543
No 160
>PLN03082 Iron-sulfur cluster assembly; Provisional
Probab=59.37 E-value=6.8 Score=36.13 Aligned_cols=66 Identities=24% Similarity=0.287 Sum_probs=47.7
Q ss_pred CCCCeEEEEcCCCChhhhhhhhhhhcCC----eEEcCCCCccccCccC--cccccceEEEeCCCCccccc-cCC
Q 011469 118 SSKPLVLWLNGGPGCSSLGYGAMEELGP----FRVNSDGKTLYRNEYA--WNNVANVLFLETPAGVGFSY-SNT 184 (485)
Q Consensus 118 ~~~PlvLWLnGGPGcSSl~~G~~~E~GP----~~v~~~~~~l~~N~~s--Wn~~anvLflDqPvGvGFSy-~~~ 184 (485)
+..+|=|-+.|| |||++.|++-.+.-| ..+..+|-++...+.+ +-+-+-|=|+|...|.||-+ .|+
T Consensus 76 ~~~~LRl~V~~g-GCSG~~Y~~~ld~~~~~~D~v~e~~Gv~vvVD~~s~~~L~Gs~IDYve~l~~~gF~f~~NP 148 (163)
T PLN03082 76 EDKMLRLSVETG-GCSGFQYVFELDDKTNSDDRVFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVVSTNP 148 (163)
T ss_pred CCceEEEEEecC-CCCCceeeeEEccCCCCCCEEEecCCeEEEECHHHHHHhCCCEEEeecCCCCCeeEEecCC
Confidence 456899999999 999987776654332 4555566555555543 45667899999999999998 554
No 161
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=59.33 E-value=14 Score=34.99 Aligned_cols=60 Identities=12% Similarity=0.207 Sum_probs=47.5
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccc
Q 011469 192 GDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNA 258 (485)
Q Consensus 192 ~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg 258 (485)
+-+++|.|+-+.++.+.++. +.+++.|.|-|+|.-.+|.+..++...- +-.++++.+-.+
T Consensus 46 tP~~~a~Dl~~~i~~y~~~w---~~~~vvLiGYSFGADvlP~~~nrLp~~~----r~~v~~v~Ll~p 105 (192)
T PF06057_consen 46 TPEQTAADLARIIRHYRARW---GRKRVVLIGYSFGADVLPFIYNRLPAAL----RARVAQVVLLSP 105 (192)
T ss_pred CHHHHHHHHHHHHHHHHHHh---CCceEEEEeecCCchhHHHHHhhCCHHH----HhheeEEEEecc
Confidence 56789999999888888765 5789999999999999999999886552 334666666433
No 162
>PLN02847 triacylglycerol lipase
Probab=59.19 E-value=16 Score=40.33 Aligned_cols=64 Identities=16% Similarity=0.279 Sum_probs=41.5
Q ss_pred CCCCCChhhHHHHHHHHH----HHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecc
Q 011469 188 YSNPGDNNTAEDSYTFLV----NWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGN 257 (485)
Q Consensus 188 ~~~~~d~~~A~d~~~fL~----~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGN 257 (485)
+.+.+.-.+|+.++..+. +-++.+|.| ++.|+|||.||-.+.-++..+.++. ..-++..+..|-
T Consensus 221 ~AH~Gml~AArwI~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~~---~fssi~CyAFgP 288 (633)
T PLN02847 221 YAHCGMVAAARWIAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQK---EFSSTTCVTFAP 288 (633)
T ss_pred ccCccHHHHHHHHHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcCC---CCCCceEEEecC
Confidence 344566677777665544 444557765 6999999999998887776554332 123456666664
No 163
>PF03283 PAE: Pectinacetylesterase
Probab=58.97 E-value=84 Score=32.80 Aligned_cols=151 Identities=19% Similarity=0.219 Sum_probs=78.9
Q ss_pred CceEEEEEEecCCCCCCCCeEEEEcCCCChhhhh---hhhhhhcCCeE-----EcCCC---CccccCccCcccccceEEE
Q 011469 103 GRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLG---YGAMEELGPFR-----VNSDG---KTLYRNEYAWNNVANVLFL 171 (485)
Q Consensus 103 ~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~---~G~~~E~GP~~-----v~~~~---~~l~~N~~sWn~~anvLfl 171 (485)
|..-.|++-+. ....++-+||.|+||=.|.+.. .-...++|-.. +..+| ..-..||.=+ .+|++||
T Consensus 34 GS~~~yy~~~g-~g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~--~wN~V~v 110 (361)
T PF03283_consen 34 GSPPGYYFRPG-SGSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFY--NWNHVFV 110 (361)
T ss_pred CCCCcEEEccC-CCCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCccc--cccEEEE
Confidence 34444555554 2456789999999998887741 01122344222 11111 0123455322 2678888
Q ss_pred eCCCCccccccCCCCCCCCCC--ChhhHHHHHHHHHHHHH-H-CCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCce
Q 011469 172 ETPAGVGFSYSNTSSDYSNPG--DNNTAEDSYTFLVNWFE-R-FPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTI 247 (485)
Q Consensus 172 DqPvGvGFSy~~~~~~~~~~~--d~~~A~d~~~fL~~f~~-~-fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~ 247 (485)
|==+|-+++-+.......+ ..-....+++.+.+++. . +++ ..++.|+|.|-||.=+..-+..+.+.- ...
T Consensus 111 --pYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~l--p~~ 184 (361)
T PF03283_consen 111 --PYCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRL--PSS 184 (361)
T ss_pred --EecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHh--ccC
Confidence 5566666643222111001 11233444555555554 4 443 458999999999987777676665542 112
Q ss_pred eeeeeeEeccccccc
Q 011469 248 INLKGIAIGNAWIDD 262 (485)
Q Consensus 248 inLkGi~iGNg~id~ 262 (485)
.+++++.=..-++|.
T Consensus 185 ~~v~~~~DsG~f~d~ 199 (361)
T PF03283_consen 185 VKVKCLSDSGFFLDN 199 (361)
T ss_pred ceEEEeccccccccc
Confidence 445555444444443
No 164
>PLN02162 triacylglycerol lipase
Probab=57.41 E-value=13 Score=39.89 Aligned_cols=40 Identities=15% Similarity=0.221 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHc
Q 011469 199 DSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSK 241 (485)
Q Consensus 199 d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~ 241 (485)
.+.+-|++.+.++|. .+++++|||.||-.+--.|..+..+
T Consensus 263 ~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~~~ 302 (475)
T PLN02162 263 TIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILAIH 302 (475)
T ss_pred HHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHHHc
Confidence 345556667777775 4699999999999887777665443
No 165
>TIGR01911 HesB_rel_seleno HesB-like selenoprotein. This model represents a family of small proteins related to HesB and its close homologs, which are likely to be invovlved in iron-sulfur cluster assembly (See TIGR00049 and pfam01521). Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain. A variable Cys/Ser/Gly-rich C-terminal region is not included in the seed alignment and model.
Probab=56.89 E-value=11 Score=31.29 Aligned_cols=58 Identities=17% Similarity=0.257 Sum_probs=34.4
Q ss_pred eEEEEcCCCChhhhhhhhhhhc---CCeEEcCCCCccccCccCcccc--cceEEEeCCCCcccc
Q 011469 122 LVLWLNGGPGCSSLGYGAMEEL---GPFRVNSDGKTLYRNEYAWNNV--ANVLFLETPAGVGFS 180 (485)
Q Consensus 122 lvLWLnGGPGcSSl~~G~~~E~---GP~~v~~~~~~l~~N~~sWn~~--anvLflDqPvGvGFS 180 (485)
|-|-+.|| |||++.|++=.+. +-..+..+|-++...+.|-.-. +-|=|+|...|.||-
T Consensus 28 LRi~v~~g-GCsG~~Y~~~ld~~~~~D~v~~~~gv~v~vD~~s~~~l~G~~iDy~~~~~g~gF~ 90 (92)
T TIGR01911 28 IRIHFAGM-GCMGPMFNLIADEEKEGDEIEKIHDLTFLIDKNLIDQFGGFSIECAEENFGAGFS 90 (92)
T ss_pred EEEEEeCC-CccCcccceEecCCCCCCEEEEeCCEEEEECHHHHHHhCCCEEEEecCCCCCcEE
Confidence 88889999 9999877765433 2223333343444444443333 345677777776663
No 166
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=56.21 E-value=41 Score=34.80 Aligned_cols=100 Identities=24% Similarity=0.410 Sum_probs=62.2
Q ss_pred CCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCCCCCCCCCChhhH
Q 011469 118 SSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTA 197 (485)
Q Consensus 118 ~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~A 197 (485)
..+-|||...|-.|. .|+|=.. ..-.+..---.|| .| ||.-++ ...++. ++..++
T Consensus 241 ngq~LvIC~EGNAGF--------YEvG~m~---tP~~lgYsvLGwN---------hP---GFagST-G~P~p~-n~~nA~ 295 (517)
T KOG1553|consen 241 NGQDLVICFEGNAGF--------YEVGVMN---TPAQLGYSVLGWN---------HP---GFAGST-GLPYPV-NTLNAA 295 (517)
T ss_pred CCceEEEEecCCccc--------eEeeeec---ChHHhCceeeccC---------CC---CccccC-CCCCcc-cchHHH
Confidence 446899998887664 3444211 1011222223344 35 555433 334553 666777
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEe
Q 011469 198 EDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAI 255 (485)
Q Consensus 198 ~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~i 255 (485)
+.+.+|-.+=+ .|+..++.|.|.|-||.-+...|.- .-++|++++
T Consensus 296 DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~---------YPdVkavvL 340 (517)
T KOG1553|consen 296 DAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASN---------YPDVKAVVL 340 (517)
T ss_pred HHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhc---------CCCceEEEe
Confidence 77777666544 4677899999999999988887764 345899877
No 167
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=56.12 E-value=11 Score=35.80 Aligned_cols=49 Identities=20% Similarity=0.226 Sum_probs=32.5
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQR 468 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~ 468 (485)
.+|+|.+.|..|.+++...++...+... .. .-+.....||.||...++.
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~-----------------------~~-~~v~~h~gGH~vP~~~~~~ 209 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFD-----------------------PD-ARVIEHDGGHHVPRKKEDV 209 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHH-----------------------HH-EEEEEESSSSS----HHHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhcc-----------------------CC-cEEEEECCCCcCcCChhhc
Confidence 5999999999999999888877776633 12 5678889999999987654
No 168
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=55.87 E-value=8.1 Score=36.96 Aligned_cols=47 Identities=23% Similarity=0.233 Sum_probs=28.6
Q ss_pred CcEEEEEecCCccccCchhHH-HHHHHcCCCCCccccccccCCccceEEEeec-ceEEEEEcCCCccC
Q 011469 396 GIRVWIYSGDTDGRVPVTSSR-YSINALNLPVETAWYPWYADGEVGGYVLGYK-GVIFTTVRGAGHLV 461 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~-~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~-~Ltf~~V~gAGHmV 461 (485)
.-+||+++|..|.+.|..-.- ...+.|+=.+. . +++.+...+|||+.
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~-------------------~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLKAAGF-------------------PHNVEHLSYPGAGHLI 163 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT------------------------EEEEETTB-S--
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHHHhCC-------------------CCcceEEEcCCCCcee
Confidence 689999999999999876544 44456652222 2 47889999999996
No 169
>PLN03037 lipase class 3 family protein; Provisional
Probab=55.84 E-value=23 Score=38.50 Aligned_cols=63 Identities=19% Similarity=0.241 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHHHHHCCCC-CCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccc
Q 011469 196 TAEDSYTFLVNWFERFPQY-KNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (485)
Q Consensus 196 ~A~d~~~fL~~f~~~fPey-~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~i 260 (485)
+.+++..-+++.++.+++. ....++|+|||.||-.+--.|..|...... ..++.-+..|.|-+
T Consensus 296 areQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~--~~~VtvyTFGsPRV 359 (525)
T PLN03037 296 ASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPA--LSNISVISFGAPRV 359 (525)
T ss_pred hHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCC--CCCeeEEEecCCCc
Confidence 4456777777777777643 345799999999999998888777665311 01344455555544
No 170
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=54.14 E-value=85 Score=31.23 Aligned_cols=40 Identities=13% Similarity=0.125 Sum_probs=27.1
Q ss_pred CeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccc
Q 011469 218 DFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (485)
Q Consensus 218 ~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~i 260 (485)
++.|+|||=||+-+-.+|.... .....+++++++..+|+=
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~---~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNA---SSSLDLRFSALILLDPVD 131 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhc---ccccccceeEEEEecccc
Confidence 6899999999995444443321 123356799999977764
No 171
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=52.94 E-value=28 Score=34.16 Aligned_cols=68 Identities=19% Similarity=0.206 Sum_probs=42.6
Q ss_pred cccceEEEeCCCCccccccCCCCCCCCCCChh-hHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHH
Q 011469 164 NVANVLFLETPAGVGFSYSNTSSDYSNPGDNN-TAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAY 236 (485)
Q Consensus 164 ~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~-~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~ 236 (485)
.-+.||-.| =.|+|-|-....+.... .-.+ +-.|+-..|..--++-| ..+.|..||||||+..--++.
T Consensus 56 ~Gf~Vlt~d-yRG~g~S~p~~~~~~~~-~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~~~ 124 (281)
T COG4757 56 AGFEVLTFD-YRGIGQSRPASLSGSQW-RYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLLGQ 124 (281)
T ss_pred cCceEEEEe-cccccCCCccccccCcc-chhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeeccccc
Confidence 345788888 59999997654443221 2223 33455554443333344 589999999999997655543
No 172
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=52.39 E-value=11 Score=30.83 Aligned_cols=28 Identities=29% Similarity=0.514 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEecccc
Q 011469 198 EDSYTFLVNWFERFPQYKNRDFFITGESYA 227 (485)
Q Consensus 198 ~d~~~fL~~f~~~fPey~~~~~yI~GESYg 227 (485)
-|+|++.+.|+.++ |-.++|.+-|+||+
T Consensus 7 vdIYDAvRaflLr~--Y~~KrfIV~g~S~~ 34 (100)
T PF07389_consen 7 VDIYDAVRAFLLRH--YYDKRFIVYGRSNA 34 (100)
T ss_pred hhHHHHHHHHHHHH--HccceEEEecchHH
Confidence 57899999999998 88899999999985
No 173
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=51.51 E-value=33 Score=32.33 Aligned_cols=46 Identities=26% Similarity=0.186 Sum_probs=31.7
Q ss_pred cCcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCcc
Q 011469 395 SGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHL 460 (485)
Q Consensus 395 ~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHm 460 (485)
...||++..|+.|..+|....+...+.|+=.+ ...++.+..||+|-
T Consensus 144 ~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~--------------------~~~~~~~y~ga~Hg 189 (218)
T PF01738_consen 144 IKAPVLILFGENDPFFPPEEVEALEEALKAAG--------------------VDVEVHVYPGAGHG 189 (218)
T ss_dssp --S-EEEEEETT-TTS-HHHHHHHHHHHHCTT--------------------TTEEEEEETT--TT
T ss_pred cCCCEeecCccCCCCCChHHHHHHHHHHHhcC--------------------CcEEEEECCCCccc
Confidence 36899999999999999999888888874212 24688899999996
No 174
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=51.39 E-value=8.6 Score=36.21 Aligned_cols=15 Identities=40% Similarity=0.948 Sum_probs=13.3
Q ss_pred CCCCeEEEEcCCCCh
Q 011469 118 SSKPLVLWLNGGPGC 132 (485)
Q Consensus 118 ~~~PlvLWLnGGPGc 132 (485)
.++|-|||.-|||||
T Consensus 5 ~~~~~IifVlGGPGs 19 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGS 19 (195)
T ss_pred ccCCCEEEEEcCCCC
Confidence 567999999999996
No 175
>COG4425 Predicted membrane protein [Function unknown]
Probab=50.96 E-value=30 Score=36.97 Aligned_cols=36 Identities=14% Similarity=0.433 Sum_probs=31.2
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccc
Q 011469 194 NNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGH 229 (485)
Q Consensus 194 ~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~ 229 (485)
.++|+.+++.+-.....-|+=..-++|+.|||.|..
T Consensus 374 ~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 374 ADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred hhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 578999999999999999987766899999998754
No 176
>PRK11190 Fe/S biogenesis protein NfuA; Provisional
Probab=50.95 E-value=20 Score=33.99 Aligned_cols=64 Identities=14% Similarity=0.245 Sum_probs=41.8
Q ss_pred CeEEEEcCCCChhhhhhhhhh----hc--CCeEEcCCCCccccCcc--CcccccceEEEeCCCCccccccCCC
Q 011469 121 PLVLWLNGGPGCSSLGYGAME----EL--GPFRVNSDGKTLYRNEY--AWNNVANVLFLETPAGVGFSYSNTS 185 (485)
Q Consensus 121 PlvLWLnGGPGcSSl~~G~~~----E~--GP~~v~~~~~~l~~N~~--sWn~~anvLflDqPvGvGFSy~~~~ 185 (485)
-|=|-+.|| |||++.|++-. |. +-..+..+|-++...+. .+-+-+-|=|+|...|.||.+.|+.
T Consensus 24 ~LRI~V~~g-GCsG~~Y~~~~~~~~~~~~~D~v~e~~gv~v~Vd~~S~~~L~G~~IDyve~~~g~gF~f~NPN 95 (192)
T PRK11190 24 QIRVFVINP-GTPNAECGVSYCPPDAVEATDTELKFDGFSAYVDELSAPFLEDAEIDFVTDQLGSQLTLKAPN 95 (192)
T ss_pred eEEEEEECC-CcCCceeeeEEeecCCCCCCCEEEEeCCEEEEECcchHhHhCCCEEEEeecCCCCceEEECCC
Confidence 355555665 99987666544 11 22444445545555544 4556688999999999999997754
No 177
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=50.86 E-value=94 Score=33.69 Aligned_cols=114 Identities=18% Similarity=0.324 Sum_probs=71.2
Q ss_pred eEEEEEEecCCCCCCCCeEEEEcCCCChhh-hhhhhhhhcC-CeEEcCCCCccccCccCcccccceEEEeCCCCcccccc
Q 011469 105 ALFYYFVESPQSSSSKPLVLWLNGGPGCSS-LGYGAMEELG-PFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYS 182 (485)
Q Consensus 105 ~lFy~f~ea~~~~~~~PlvLWLnGGPGcSS-l~~G~~~E~G-P~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~ 182 (485)
.++|+|-+- .-+.||.+.+.|==..-+ -||++|-.+| ||.+=.| |.=-|-++-
T Consensus 277 Ei~yYFnPG---D~KPPL~VYFSGyR~aEGFEgy~MMk~Lg~PfLL~~D----------------------pRleGGaFY 331 (511)
T TIGR03712 277 EFIYYFNPG---DFKPPLNVYFSGYRPAEGFEGYFMMKRLGAPFLLIGD----------------------PRLEGGAFY 331 (511)
T ss_pred eeEEecCCc---CCCCCeEEeeccCcccCcchhHHHHHhcCCCeEEeec----------------------cccccceee
Confidence 355555433 245699999999544444 3456777775 7765444 444455554
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccccc
Q 011469 183 NTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (485)
Q Consensus 183 ~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~ 262 (485)
-. .++.=+.+.+.+++-++.- .|+.+++.|.|=|+|..=+-+.+. .+|=++|+||-|+++-
T Consensus 332 lG--------s~eyE~~I~~~I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYga----------~l~P~AIiVgKPL~NL 392 (511)
T TIGR03712 332 LG--------SDEYEQGIINVIQEKLDYL-GFDHDQLILSGLSMGTFGALYYGA----------KLSPHAIIVGKPLVNL 392 (511)
T ss_pred eC--------cHHHHHHHHHHHHHHHHHh-CCCHHHeeeccccccchhhhhhcc----------cCCCceEEEcCcccch
Confidence 32 2333344555555555543 588899999999999764444443 4567889999988864
No 178
>PRK14567 triosephosphate isomerase; Provisional
Probab=49.83 E-value=37 Score=33.65 Aligned_cols=61 Identities=20% Similarity=0.291 Sum_probs=45.1
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccccc
Q 011469 194 NNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (485)
Q Consensus 194 ~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~ 263 (485)
.+.+++++.|+++++..+-+-....+=|. |||---|.=+..+.+. -++.|++||.+-+++.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~------~diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSL------PDVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcC------CCCCEEEeehhhhcHH
Confidence 46789999999999976521111222222 9999999999998775 3589999999998763
No 179
>PRK14566 triosephosphate isomerase; Provisional
Probab=49.28 E-value=41 Score=33.45 Aligned_cols=61 Identities=18% Similarity=0.359 Sum_probs=45.4
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccccc
Q 011469 194 NNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (485)
Q Consensus 194 ~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~ 263 (485)
.+.|++++.|+++++...-+.....+=|. |||---|.-+..|... -++.|++||..-+++.
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~------~dIDG~LVGgASL~~~ 248 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQ------PDVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcC------CCCCeEEechHhcCHH
Confidence 45689999999999975421112223333 9999999999999775 3599999999988873
No 180
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=49.14 E-value=54 Score=31.78 Aligned_cols=62 Identities=10% Similarity=0.029 Sum_probs=44.4
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccc
Q 011469 192 GDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (485)
Q Consensus 192 ~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~ 259 (485)
+..+-++.+...+..+.. ..+++.|+|.|-|+.-+-..++++.+... ...-+++-+++|||-
T Consensus 28 Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~-~~~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 28 SVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGD-PPPDDLSFVLIGNPR 89 (225)
T ss_pred HHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCC-CCcCceEEEEecCCC
Confidence 444556666666665554 57899999999999988888888777431 111468899999885
No 181
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=47.53 E-value=19 Score=25.47 Aligned_cols=33 Identities=12% Similarity=0.052 Sum_probs=27.3
Q ss_pred ccccccccccchhhHHHhhccCCCHHHHHHHHh
Q 011469 257 NAWIDDNLCTKGMFDFFWTHALNSDETNAAINK 289 (485)
Q Consensus 257 Ng~id~~~~~~~~~~~~~~~gli~~~~~~~i~~ 289 (485)
.|++||.....-..+-++..|+||.++...+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 488999998888888899999999999887754
No 182
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=45.56 E-value=71 Score=33.43 Aligned_cols=93 Identities=16% Similarity=0.147 Sum_probs=67.6
Q ss_pred HHHHHhChHHHHHHhcCCCCCccccCcccccCCCCCchHHHHHHhhcCcEEEEEecCCccccCchhHHHHHHHcCCCCCc
Q 011469 349 YVNSYLNLAEVQAALHAKHTNWSTCSDLTWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVET 428 (485)
Q Consensus 349 ~~~~ylN~~~Vq~AL~v~~~~w~~cs~~v~~d~~~s~~~~l~~Ll~~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~ 428 (485)
.+..+||.|..++.+.+-+. +...+.| .++-+|++|--|--...-.+..+.++|. |
T Consensus 235 gi~~~l~tp~f~~L~~ivDP-----------------~~Y~~rL---~~PK~ii~atgDeFf~pD~~~~y~d~L~--G-- 290 (367)
T PF10142_consen 235 GITQQLDTPEFDKLMQIVDP-----------------YSYRDRL---TMPKYIINATGDEFFVPDSSNFYYDKLP--G-- 290 (367)
T ss_pred CchhhcCCHHHHHHHHhcCH-----------------HHHHHhc---CccEEEEecCCCceeccCchHHHHhhCC--C--
Confidence 36678888988887765432 1112333 5899999999999888889999999887 1
Q ss_pred cccccccCCccceEEEeecceEEEEEcCCCccCCc-cChHHHHHHHHHHHcCCCCCC
Q 011469 429 AWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPT-YQPQRALIMISSFLEGKLPPS 484 (485)
Q Consensus 429 ~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~-dqP~~al~l~~~fl~g~~~p~ 484 (485)
.=.+-.|+|+||..-. +--+.....+++.+.|+++|+
T Consensus 291 -------------------~K~lr~vPN~~H~~~~~~~~~~l~~f~~~~~~~~~lP~ 328 (367)
T PF10142_consen 291 -------------------EKYLRYVPNAGHSLIGSDVVQSLRAFYNRIQNGRPLPQ 328 (367)
T ss_pred -------------------CeeEEeCCCCCcccchHHHHHHHHHHHHHHHcCCCCCe
Confidence 1256788999998654 344555666777788999995
No 183
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=45.30 E-value=41 Score=31.28 Aligned_cols=83 Identities=17% Similarity=0.210 Sum_probs=52.0
Q ss_pred ceEEEeCCCCccc-cccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCC
Q 011469 167 NVLFLETPAGVGF-SYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSK 245 (485)
Q Consensus 167 nvLflDqPvGvGF-Sy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~ 245 (485)
++--|+=|+..+. +|.. +....+.++...++++..+-| +.+|.|+|-|=|+.-+-..+.. ......
T Consensus 41 ~~~~V~YpA~~~~~~y~~--------S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~--~~l~~~ 107 (179)
T PF01083_consen 41 AVQGVEYPASLGPNSYGD--------SVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSG--DGLPPD 107 (179)
T ss_dssp EEEE--S---SCGGSCHH--------HHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHH--TTSSHH
T ss_pred EEEecCCCCCCCcccccc--------cHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHh--ccCChh
Confidence 4444666777776 4543 456678888899999999999 4689999999999987777665 000001
Q ss_pred ceeeeee-eEeccccccc
Q 011469 246 TIINLKG-IAIGNAWIDD 262 (485)
Q Consensus 246 ~~inLkG-i~iGNg~id~ 262 (485)
..-++.+ +++|||.-.+
T Consensus 108 ~~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 108 VADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp HHHHEEEEEEES-TTTBT
T ss_pred hhhhEEEEEEecCCcccC
Confidence 1223666 5788888754
No 184
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.31 E-value=32 Score=35.78 Aligned_cols=117 Identities=14% Similarity=0.225 Sum_probs=66.2
Q ss_pred CCCCCeEEEEcCCCChhhhhhhhhhhcCCeEE----cCCCCccccCccCcccccceEEEeCCCCccccccCCCCCCCCCC
Q 011469 117 SSSKPLVLWLNGGPGCSSLGYGAMEELGPFRV----NSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPG 192 (485)
Q Consensus 117 ~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v----~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~ 192 (485)
...+-++++++| |.+-.|=+++|. +..+.....=-+||-..+++ -+|. -
T Consensus 113 s~~k~vlvFvHG--------fNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l-----------------~~Yn--~ 165 (377)
T COG4782 113 SSAKTVLVFVHG--------FNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSL-----------------LGYN--Y 165 (377)
T ss_pred cCCCeEEEEEcc--------cCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCee-----------------eecc--c
Confidence 367889999998 677777777763 22222222223344333332 1222 3
Q ss_pred ChhhHHHHHHHHHHH---HHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccccc
Q 011469 193 DNNTAEDSYTFLVNW---FERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (485)
Q Consensus 193 d~~~A~d~~~fL~~f---~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~ 262 (485)
|.+.++.....|... +.+-+. -+++||..||+|.-.+-..-.++.-++.......++=+++-.|-+|-
T Consensus 166 DreS~~~Sr~aLe~~lr~La~~~~--~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 166 DRESTNYSRPALERLLRYLATDKP--VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred chhhhhhhHHHHHHHHHHHHhCCC--CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 333333333334433 334433 46899999999998777776666555411144557777776666554
No 185
>PRK09502 iscA iron-sulfur cluster assembly protein; Provisional
Probab=40.79 E-value=31 Score=29.21 Aligned_cols=65 Identities=20% Similarity=0.356 Sum_probs=41.6
Q ss_pred CCeEEEEcCCCChhhhhhhhh--hhcCC--eEEcCCCCcccc--CccCcccccceEEEeCCCCccccccCCC
Q 011469 120 KPLVLWLNGGPGCSSLGYGAM--EELGP--FRVNSDGKTLYR--NEYAWNNVANVLFLETPAGVGFSYSNTS 185 (485)
Q Consensus 120 ~PlvLWLnGGPGcSSl~~G~~--~E~GP--~~v~~~~~~l~~--N~~sWn~~anvLflDqPvGvGFSy~~~~ 185 (485)
..|=|-+.+| |||++.|++- .|..+ ..+..++-++.. ....+-+-+-|=|+|.+.|.||.+.|+.
T Consensus 24 ~~LRi~v~~~-GCsG~~Y~l~~~~~~~~~D~~~~~~g~~v~id~~s~~~l~g~~IDy~~~~~~~~F~f~NPn 94 (107)
T PRK09502 24 FGLRLGVRTS-GCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPN 94 (107)
T ss_pred ceEEEEEECC-CcCCeeeEeeecCCCCCCCEEEEcCCeEEEEeHHHHhHhCCCEEEEeeCCCCceEEEECCC
Confidence 3466666665 9998766653 34433 233334433333 3355667788999999999999987643
No 186
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=39.06 E-value=67 Score=30.00 Aligned_cols=65 Identities=25% Similarity=0.229 Sum_probs=39.6
Q ss_pred cccceEEEe--CCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHC-CCCCCCCeEEEeccccccchHHHHHH
Q 011469 164 NVANVLFLE--TPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERF-PQYKNRDFFITGESYAGHYVPQLAYT 237 (485)
Q Consensus 164 ~~anvLflD--qPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~f-Pey~~~~~yI~GESYgG~YvP~lA~~ 237 (485)
++|-|.|++ .|.+...+-..+ . --+..|.++-.|+...-..+ | .-.+-+.|||||..-+-.-+..
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~~~--~----~A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAASP--G----YARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CeEEEEEcCCCCCCCccccccCc--h----HHHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHhhh
Confidence 778888874 442233222111 1 11345666667666655555 3 3578999999999877666654
No 187
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=37.50 E-value=68 Score=31.26 Aligned_cols=77 Identities=18% Similarity=0.182 Sum_probs=48.0
Q ss_pred HHhhcCcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEc-CCCccCCccCh--H
Q 011469 391 QLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVR-GAGHLVPTYQP--Q 467 (485)
Q Consensus 391 ~Ll~~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~-gAGHmVP~dqP--~ 467 (485)
.+-+-..||++..|+.|-+||......|-+.|+= +-.++-+++.|.+.+--.+. .+==.-|.|++ |
T Consensus 159 D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~-----------~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~e 227 (242)
T KOG3043|consen 159 DIANVKAPILFLFAELDEDVPPKDVKAWEEKLKE-----------NPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAE 227 (242)
T ss_pred HHhcCCCCEEEEeecccccCCHHHHHHHHHHHhc-----------CcccceeEEEcCCccchhhhhccCCCChhHHHHHH
Confidence 3333468999999999999999999998888761 11233345555443222221 22223455655 5
Q ss_pred HHHHHHHHHHc
Q 011469 468 RALIMISSFLE 478 (485)
Q Consensus 468 ~al~l~~~fl~ 478 (485)
.+++.+.+|++
T Consensus 228 ea~~~~~~Wf~ 238 (242)
T KOG3043|consen 228 EAYQRFISWFK 238 (242)
T ss_pred HHHHHHHHHHH
Confidence 67777777764
No 188
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=37.43 E-value=33 Score=37.86 Aligned_cols=132 Identities=23% Similarity=0.224 Sum_probs=82.6
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCC--CCc--cccCccCcc-cccceEEEeCCCC
Q 011469 102 AGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSD--GKT--LYRNEYAWN-NVANVLFLETPAG 176 (485)
Q Consensus 102 ~~~~lFy~f~ea~~~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~--~~~--l~~N~~sWn-~~anvLflDqPvG 176 (485)
.|-.|.=-.+- +.+....|++|-+. .+|++-+.. +.. ..+++--|. +-.-|+..| =.|
T Consensus 28 DGvrL~~dIy~-Pa~~g~~Pvll~~~---------------~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qD-vRG 90 (563)
T COG2936 28 DGVRLAADIYR-PAGAGPLPVLLSRT---------------RLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQD-VRG 90 (563)
T ss_pred CCeEEEEEEEc-cCCCCCCceeEEee---------------ccccccccccCcchhhcccccceeecCceEEEEec-ccc
Confidence 45566543332 23457889998888 334443321 000 111111122 235688889 499
Q ss_pred ccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEec
Q 011469 177 VGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIG 256 (485)
Q Consensus 177 vGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iG 256 (485)
.|-|.+.-.- +. + +-++|-|+ +++|+.+-|. -+-++=..|-||+|.-.-++|..= .--||.|+.-
T Consensus 91 ~~~SeG~~~~-~~--~--~E~~Dg~D-~I~Wia~QpW-sNG~Vgm~G~SY~g~tq~~~Aa~~--------pPaLkai~p~ 155 (563)
T COG2936 91 RGGSEGVFDP-ES--S--REAEDGYD-TIEWLAKQPW-SNGNVGMLGLSYLGFTQLAAAALQ--------PPALKAIAPT 155 (563)
T ss_pred cccCCcccce-ec--c--ccccchhH-HHHHHHhCCc-cCCeeeeecccHHHHHHHHHHhcC--------Cchheeeccc
Confidence 9999886432 11 2 46778888 7889999874 455899999999999766666432 3349999988
Q ss_pred ccccccccc
Q 011469 257 NAWIDDNLC 265 (485)
Q Consensus 257 Ng~id~~~~ 265 (485)
-+..|-..+
T Consensus 156 ~~~~D~y~d 164 (563)
T COG2936 156 EGLVDRYRD 164 (563)
T ss_pred ccccccccc
Confidence 888875443
No 189
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=36.90 E-value=1.1e+02 Score=30.19 Aligned_cols=65 Identities=35% Similarity=0.342 Sum_probs=43.8
Q ss_pred cCcEEEEEecC------CccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcC--CCccCCccCh
Q 011469 395 SGIRVWIYSGD------TDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRG--AGHLVPTYQP 466 (485)
Q Consensus 395 ~girVlIysGd------~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~g--AGHmVP~dqP 466 (485)
.+++||-+.|+ .|.+||..+++..=.-++ +.+ ...+-.+|.| |.|---.+.|
T Consensus 183 ~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~-------------~~~-------~~Y~e~~v~G~~a~HS~LheN~ 242 (255)
T PF06028_consen 183 KNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLK-------------NRA-------KSYQEKTVTGKDAQHSQLHENP 242 (255)
T ss_dssp TT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCT-------------TTS-------SEEEEEEEESGGGSCCGGGCCH
T ss_pred CCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhh-------------ccc-------CceEEEEEECCCCccccCCCCH
Confidence 37999999999 899999988754333332 111 1234466655 7999988888
Q ss_pred HHHHHHHHHHHcCC
Q 011469 467 QRALIMISSFLEGK 480 (485)
Q Consensus 467 ~~al~l~~~fl~g~ 480 (485)
.+..+|.+||-++
T Consensus 243 -~V~~~I~~FLw~k 255 (255)
T PF06028_consen 243 -QVDKLIIQFLWGK 255 (255)
T ss_dssp -HHHHHHHHHHCT-
T ss_pred -HHHHHHHHHhcCC
Confidence 5568888888653
No 190
>TIGR03341 YhgI_GntY IscR-regulated protein YhgI. IscR (TIGR02010) is an iron-sulfur cluster-binding transcriptional regulator (see Genome Property GenProp0138). Members of this protein family include YhgI, whose expression is under control of IscR, and show sequence similarity to IscA, a known protein of iron-sulfur cluster biosynthesis. These two lines of evidence strongly suggest a role as an iron-sulfur cluster biosynthesis protein. An older study designated this protein GntY and suggested a role for it and for the product of an adjacent gene, based on complementation studies, in gluconate utilization.
Probab=36.84 E-value=47 Score=31.39 Aligned_cols=64 Identities=11% Similarity=0.193 Sum_probs=42.5
Q ss_pred CeEEEEcCCCChhhhhhhhh----hhc--CCeEEcCCCCccccCc--cCcccccceEEEeCCCCccccccCCC
Q 011469 121 PLVLWLNGGPGCSSLGYGAM----EEL--GPFRVNSDGKTLYRNE--YAWNNVANVLFLETPAGVGFSYSNTS 185 (485)
Q Consensus 121 PlvLWLnGGPGcSSl~~G~~----~E~--GP~~v~~~~~~l~~N~--~sWn~~anvLflDqPvGvGFSy~~~~ 185 (485)
.|=|-+.|| |||++.|++- .|. +=..+..+|-++...+ ..+-+-+-|=|+|...|.||.+.|+.
T Consensus 23 ~LRv~V~~g-GCsG~~Y~l~~~~~~~~~~~D~v~e~~g~~v~Vd~~s~~~L~g~~IDyve~~~g~gF~f~NPn 94 (190)
T TIGR03341 23 GIRVFVVNP-GTPYAECCVSYCPPDEVEPSDIKLEFNGFSAYVDALSAPFLEDAVIDFVTDRMGGQLTLKAPN 94 (190)
T ss_pred eEEEEEECC-ccCCceeeeEEcccCCCCCCCEEEEeCCEEEEEccchhhHhCCCEEEEeecCCCceeEEeCCc
Confidence 466667775 9998777663 232 2234444444444433 45667788999999999999997754
No 191
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=36.72 E-value=1.3e+02 Score=31.98 Aligned_cols=90 Identities=24% Similarity=0.255 Sum_probs=57.6
Q ss_pred CCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCCCCCCCCCChhh
Q 011469 117 SSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNT 196 (485)
Q Consensus 117 ~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~ 196 (485)
..++|+||...| |++.. .|.+- +-+=-=.+|.|+||. .=-|=|.-. +.|...-+.+++
T Consensus 60 ~~drPtV~~T~G--------Y~~~~--~p~r~----------Ept~Lld~NQl~vEh-RfF~~SrP~-p~DW~~Lti~QA 117 (448)
T PF05576_consen 60 DFDRPTVLYTEG--------YNVST--SPRRS----------EPTQLLDGNQLSVEH-RFFGPSRPE-PADWSYLTIWQA 117 (448)
T ss_pred CCCCCeEEEecC--------ccccc--Ccccc----------chhHhhccceEEEEE-eeccCCCCC-CCCcccccHhHh
Confidence 367899999887 44422 23331 112223478999996 333333322 233333477899
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchH
Q 011469 197 AEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVP 232 (485)
Q Consensus 197 A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP 232 (485)
|.|.+...+.|-..+| .++.=+|-|=||.-.-
T Consensus 118 A~D~Hri~~A~K~iY~----~kWISTG~SKGGmTa~ 149 (448)
T PF05576_consen 118 ASDQHRIVQAFKPIYP----GKWISTGGSKGGMTAV 149 (448)
T ss_pred hHHHHHHHHHHHhhcc----CCceecCcCCCceeEE
Confidence 9999998888866665 3689999999998543
No 192
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=35.75 E-value=25 Score=33.12 Aligned_cols=53 Identities=15% Similarity=0.151 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccc
Q 011469 196 TAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNA 258 (485)
Q Consensus 196 ~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg 258 (485)
..+|+.. ..+|++..|+....++-++|-|+||+++-.+|..- . .+++.+.-=|
T Consensus 78 ~~~~~~a-a~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~--------~~~a~v~~yg 130 (218)
T PF01738_consen 78 VAADLQA-AVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-P--------RVDAAVSFYG 130 (218)
T ss_dssp HHHHHHH-HHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-T--------TSSEEEEES-
T ss_pred HHHHHHH-HHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-c--------ccceEEEEcC
Confidence 3444433 56778888877788999999999999887777543 1 2566666444
No 193
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=34.94 E-value=35 Score=35.82 Aligned_cols=40 Identities=13% Similarity=0.134 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHH
Q 011469 199 DSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTI 238 (485)
Q Consensus 199 d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I 238 (485)
+.+.-|++..+.-=+-.++++.|.|||+||-++-.+-...
T Consensus 101 ~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhc
Confidence 3444455555432223378999999999999888776665
No 194
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=34.46 E-value=48 Score=37.93 Aligned_cols=95 Identities=17% Similarity=0.268 Sum_probs=51.1
Q ss_pred EEEEcCCCCh----hhhh--hhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCccccccCCCCCCCCCCChhh
Q 011469 123 VLWLNGGPGC----SSLG--YGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNT 196 (485)
Q Consensus 123 vLWLnGGPGc----SSl~--~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~~~~~~~~~~d~~~ 196 (485)
||++=|--|+ =|++ --+-.-.||++=..| ..|+++. +-.-+| ..=-||--+. ....+.
T Consensus 92 VLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~----~d~~~~~----DFFaVD--FnEe~tAm~G------~~l~dQ 155 (973)
T KOG3724|consen 92 VLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTED----RDNPFSF----DFFAVD--FNEEFTAMHG------HILLDQ 155 (973)
T ss_pred EEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhc----ccCcccc----ceEEEc--ccchhhhhcc------HhHHHH
Confidence 6788787773 2332 122335789883332 2466665 222233 0111221111 133456
Q ss_pred HHHHHHHHHH---HHHHCCCCC---CCCeEEEeccccccchHH
Q 011469 197 AEDSYTFLVN---WFERFPQYK---NRDFFITGESYAGHYVPQ 233 (485)
Q Consensus 197 A~d~~~fL~~---f~~~fPey~---~~~~yI~GESYgG~YvP~ 233 (485)
++.+.+++.. -++.-+||+ ..++.|.||||||.-+-.
T Consensus 156 tEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra 198 (973)
T KOG3724|consen 156 TEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARA 198 (973)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHH
Confidence 6666555554 445556776 667999999999975433
No 195
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=34.40 E-value=2.1e+02 Score=30.18 Aligned_cols=136 Identities=21% Similarity=0.389 Sum_probs=81.3
Q ss_pred CCceEEEEEEecCCC---CCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCcc
Q 011469 102 AGRALFYYFVESPQS---SSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVG 178 (485)
Q Consensus 102 ~~~~lFy~f~ea~~~---~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvG 178 (485)
.|-+++|--+..... .+-.|| |.++|=||. +=-|...=|..-++..- =..+.| +++||-- +-+|-|
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~Pl-Ll~HGwPGs----v~EFykfIPlLT~p~~h-g~~~d~----~FEVI~P-SlPGyg 200 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPL-LLLHGWPGS----VREFYKFIPLLTDPKRH-GNESDY----AFEVIAP-SLPGYG 200 (469)
T ss_pred cceeEEEEEecCCccccCCcccce-EEecCCCch----HHHHHhhhhhhcCcccc-CCccce----eEEEecc-CCCCcc
Confidence 356788877765432 233454 568999995 23344444655444210 001222 2444433 457777
Q ss_pred ccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccc
Q 011469 179 FSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNA 258 (485)
Q Consensus 179 FSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg 258 (485)
||-..+..++ +..++|.-+...+. | +.-++|||=|--||.....-+|....++ +.|+=+-+.
T Consensus 201 wSd~~sk~GF---n~~a~ArvmrkLMl----R---Lg~nkffiqGgDwGSiI~snlasLyPen--------V~GlHlnm~ 262 (469)
T KOG2565|consen 201 WSDAPSKTGF---NAAATARVMRKLML----R---LGYNKFFIQGGDWGSIIGSNLASLYPEN--------VLGLHLNMC 262 (469)
T ss_pred cCcCCccCCc---cHHHHHHHHHHHHH----H---hCcceeEeecCchHHHHHHHHHhhcchh--------hhHhhhccc
Confidence 7766544443 55566666555444 2 4557899999889998888888887665 777777666
Q ss_pred cccccccc
Q 011469 259 WIDDNLCT 266 (485)
Q Consensus 259 ~id~~~~~ 266 (485)
.+.+....
T Consensus 263 ~~~s~~s~ 270 (469)
T KOG2565|consen 263 FVNSPFST 270 (469)
T ss_pred ccCCcHHH
Confidence 66665443
No 196
>PLN02429 triosephosphate isomerase
Probab=33.59 E-value=83 Score=32.21 Aligned_cols=61 Identities=13% Similarity=0.251 Sum_probs=44.2
Q ss_pred hhhHHHHHHHHHHHHHH-CCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccccc
Q 011469 194 NNTAEDSYTFLVNWFER-FPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (485)
Q Consensus 194 ~~~A~d~~~fL~~f~~~-fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~ 263 (485)
.+.++.+..|+++|+.. +.+-....+-|. |||---|.-+..+..+ .++.|++||.+.+++.
T Consensus 238 ~e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~------~diDG~LVGgASL~~~ 299 (315)
T PLN02429 238 PQQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE------EDIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC------CCCCEEEeecceecHH
Confidence 35688899999999875 322212233333 9999999999888754 3589999999998753
No 197
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=32.56 E-value=33 Score=32.28 Aligned_cols=27 Identities=19% Similarity=0.063 Sum_probs=24.1
Q ss_pred cEEEEEecCCccccCchhHHHHHHHcC
Q 011469 397 IRVWIYSGDTDGRVPVTSSRYSINALN 423 (485)
Q Consensus 397 irVlIysGd~D~i~p~~gt~~~i~~L~ 423 (485)
-+++|++|+.|.+||....+...+.|+
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l~ 195 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAML 195 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHHH
Confidence 457899999999999999999988876
No 198
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=31.92 E-value=49 Score=34.99 Aligned_cols=37 Identities=43% Similarity=0.743 Sum_probs=28.0
Q ss_pred ceeEeeeEEecCCCCceEEEEEEecCCCCCCCCeE-EEEcC
Q 011469 89 FDQYAGYLTVDPKAGRALFYYFVESPQSSSSKPLV-LWLNG 128 (485)
Q Consensus 89 ~~~ysGyv~v~~~~~~~lFy~f~ea~~~~~~~Plv-LWLnG 128 (485)
...-.||++.++. ++|.. +.|+.....+-||| +||.|
T Consensus 198 ~~~k~GfLTmDqt--Rkl~l-LlesDpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 198 GTYKSGFLTMDQT--RKLLL-LLESDPKASSLPLVGIWLSG 235 (410)
T ss_pred cccccceeeEccc--cceEE-EeccCCCccCCCceeeEecC
Confidence 3457999999864 77777 78886555676776 89988
No 199
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=31.61 E-value=3e+02 Score=29.90 Aligned_cols=34 Identities=15% Similarity=0.187 Sum_probs=23.2
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEeccccccchHHHH
Q 011469 201 YTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLA 235 (485)
Q Consensus 201 ~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA 235 (485)
++++++....|- =..+++-|+|||.||..|-.+.
T Consensus 180 L~wv~~~I~~FG-Gdp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 180 LRWVKDNIPSFG-GDPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHHhcC-CCCCeEEEEeechhHHHHHHHh
Confidence 445555555563 2345799999999999885543
No 200
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=31.35 E-value=77 Score=32.27 Aligned_cols=70 Identities=11% Similarity=0.123 Sum_probs=39.4
Q ss_pred CChhhHHHHHHHHHHHHHHC-CC-CCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccccccc
Q 011469 192 GDNNTAEDSYTFLVNWFERF-PQ-YKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLC 265 (485)
Q Consensus 192 ~d~~~A~d~~~fL~~f~~~f-Pe-y~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~~~ 265 (485)
+-++-++|+-..+ ++++.. .. +...++.|.|||=|..=+-++...- +.......++|+|+-.|+-|.+..
T Consensus 82 SL~~D~~eI~~~v-~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~---~~~~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 82 SLDRDVEEIAQLV-EYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSP---NPSPSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp -HHHHHHHHHHHH-HHHHHHS------S-EEEEEECCHHHHHHHHHHH----TT---CCCEEEEEEEEE---TTST
T ss_pred hhhhHHHHHHHHH-HHHHHhhccccCCccEEEEecCCCcHHHHHHHhcc---CccccccceEEEEEeCCCCChhHh
Confidence 5567788887744 444433 22 4567999999999987665554432 211224669999999998776543
No 201
>PRK09504 sufA iron-sulfur cluster assembly scaffold protein; Provisional
Probab=31.27 E-value=47 Score=28.95 Aligned_cols=64 Identities=20% Similarity=0.291 Sum_probs=42.1
Q ss_pred CCeEEEEcCCCChhhhhhhhh--hhcCCe--EEcCCCCccccCc--cCcccccceEEEeCCCCccccccCC
Q 011469 120 KPLVLWLNGGPGCSSLGYGAM--EELGPF--RVNSDGKTLYRNE--YAWNNVANVLFLETPAGVGFSYSNT 184 (485)
Q Consensus 120 ~PlvLWLnGGPGcSSl~~G~~--~E~GP~--~v~~~~~~l~~N~--~sWn~~anvLflDqPvGvGFSy~~~ 184 (485)
..|-|-+.|| |||++.|++- .|.+|- .+..+|-.+...+ -.+-+-+-|=|+|.+.|.||-+.|+
T Consensus 39 ~~LRi~v~~g-GCsG~~Y~~~l~~e~~~~D~v~e~~g~~v~Id~~s~~~L~g~~IDy~~~~~~~gF~f~NP 108 (122)
T PRK09504 39 KGVRLGVKQT-GCAGFGYVLDSVSEPDKDDLVFEHDGAKLFVPLQAMPFIDGTEVDYVREGLNQIFKFHNP 108 (122)
T ss_pred ceEEEEEECC-CCCceEEEeeecCCCCCCCEEEEeCCEEEEEcHHHHHhhCCcEEEeecCCCcceEEEECC
Confidence 4577777776 9999877653 444443 3344443333333 3455667788999999999998764
No 202
>PF15128 T_cell_tran_alt: T-cell leukemia translocation-altered
Probab=31.15 E-value=36 Score=27.72 Aligned_cols=25 Identities=36% Similarity=0.478 Sum_probs=22.2
Q ss_pred CceehhHHHHHHHHHHhhHHhhhhh
Q 011469 1 MKVSLTTTTTWWLLLSLSCYQLACY 25 (485)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~ 25 (485)
|||+|--.-+-||||++-+.++|=+
T Consensus 23 mrv~ifkllL~WlvlsLl~I~lAWk 47 (92)
T PF15128_consen 23 MRVQIFKLLLGWLVLSLLAIHLAWK 47 (92)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999988888865
No 203
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=31.10 E-value=42 Score=32.45 Aligned_cols=27 Identities=15% Similarity=0.252 Sum_probs=23.5
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHc
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINAL 422 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L 422 (485)
+++++|++|+.|.+|+....+..+++.
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHH
Confidence 679999999999999999888877653
No 204
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=30.39 E-value=77 Score=35.27 Aligned_cols=49 Identities=18% Similarity=0.185 Sum_probs=40.8
Q ss_pred HHhhcCcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCC
Q 011469 391 QLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVP 462 (485)
Q Consensus 391 ~Ll~~girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP 462 (485)
.|++.+.+||+..|..|..|+....+..-++|.-.. ..++|.+|+|..-
T Consensus 299 ~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~-----------------------elhVI~~adhsma 347 (784)
T KOG3253|consen 299 ALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEV-----------------------ELHVIGGADHSMA 347 (784)
T ss_pred hhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccc-----------------------eEEEecCCCcccc
Confidence 577778999999999999999999988888876322 4788999999754
No 205
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=30.27 E-value=86 Score=34.89 Aligned_cols=73 Identities=25% Similarity=0.296 Sum_probs=45.9
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCc------cCh---
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPT------YQP--- 466 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~------dqP--- 466 (485)
|.|.+|.+|..|.++|..-+-+-.-.|+ .++.|- -..|.|+.|-+|=|+=.+ +.+
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln-------------~~~eG~---~s~lrYyeV~naqHfDaf~~~pG~~~r~VP 618 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLN-------------RQVEGR---ASRLRYYEVTNAQHFDAFLDFPGFDTRFVP 618 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHh-------------hhhccc---ccceeEEEecCCeechhhccCCCCCccccc
Confidence 7899999999999999875433332222 011110 124888889888887321 111
Q ss_pred -----HHHHHHHHHHH-cCCCCCC
Q 011469 467 -----QRALIMISSFL-EGKLPPS 484 (485)
Q Consensus 467 -----~~al~l~~~fl-~g~~~p~ 484 (485)
.+||+++-.+| .|++||.
T Consensus 619 lh~Y~~qALd~M~a~L~~G~~LPp 642 (690)
T PF10605_consen 619 LHPYFFQALDLMWAHLKSGAALPP 642 (690)
T ss_pred ccHHHHHHHHHHHHHhhcCCCCCc
Confidence 56777665555 4778875
No 206
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=29.61 E-value=43 Score=31.90 Aligned_cols=56 Identities=20% Similarity=0.166 Sum_probs=38.4
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQPQRALIMISS 475 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dqP~~al~l~~~ 475 (485)
-.+++|++|+.|-++...-...|.+. ..++.+++.+|.|+-.-.-. ...+.+..
T Consensus 149 P~~~lvi~g~~Ddvv~l~~~l~~~~~-------------------------~~~~~i~i~~a~HFF~gKl~-~l~~~i~~ 202 (210)
T COG2945 149 PSPGLVIQGDADDVVDLVAVLKWQES-------------------------IKITVITIPGADHFFHGKLI-ELRDTIAD 202 (210)
T ss_pred CCCceeEecChhhhhcHHHHHHhhcC-------------------------CCCceEEecCCCceecccHH-HHHHHHHH
Confidence 37899999999976666544444433 23688999999999766554 34444555
Q ss_pred HH
Q 011469 476 FL 477 (485)
Q Consensus 476 fl 477 (485)
|+
T Consensus 203 ~l 204 (210)
T COG2945 203 FL 204 (210)
T ss_pred Hh
Confidence 55
No 207
>COG3150 Predicted esterase [General function prediction only]
Probab=28.80 E-value=46 Score=31.01 Aligned_cols=58 Identities=12% Similarity=0.190 Sum_probs=40.8
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccccccccc
Q 011469 192 GDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLCTK 267 (485)
Q Consensus 192 ~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~~~~~ 267 (485)
...++++.+-..++ ++.+++.-|.|-|-||.|..-|+.+. -|+.+ |-||-+-|.....
T Consensus 41 ~p~~a~~ele~~i~-------~~~~~~p~ivGssLGGY~At~l~~~~----------Girav-~~NPav~P~e~l~ 98 (191)
T COG3150 41 DPQQALKELEKAVQ-------ELGDESPLIVGSSLGGYYATWLGFLC----------GIRAV-VFNPAVRPYELLT 98 (191)
T ss_pred CHHHHHHHHHHHHH-------HcCCCCceEEeecchHHHHHHHHHHh----------CChhh-hcCCCcCchhhhh
Confidence 44566666666555 57778899999999999988888653 25554 4477777765443
No 208
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=28.13 E-value=70 Score=31.50 Aligned_cols=50 Identities=12% Similarity=0.001 Sum_probs=36.4
Q ss_pred CcEEEEEecCCccccCc-hhHHHHHHHcCCCCCccccccccCCccceEEEeecceEEEEEcCCCccCCccC
Q 011469 396 GIRVWIYSGDTDGRVPV-TSSRYSINALNLPVETAWYPWYADGEVGGYVLGYKGVIFTTVRGAGHLVPTYQ 465 (485)
Q Consensus 396 girVlIysGd~D~i~p~-~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~~Ltf~~V~gAGHmVP~dq 465 (485)
..+++|.+|..|..+|. ...+...+.|+=.+ ...++.+..|+||--....
T Consensus 211 ~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g--------------------~~v~~~~~~g~~H~f~~~~ 261 (275)
T TIGR02821 211 HSTILIDQGTADQFLDEQLRPDAFEQACRAAG--------------------QALTLRRQAGYDHSYYFIA 261 (275)
T ss_pred CCCeeEeecCCCcccCccccHHHHHHHHHHcC--------------------CCeEEEEeCCCCccchhHH
Confidence 47999999999999998 45555665554111 1468899999999876544
No 209
>TIGR02011 IscA iron-sulfur cluster assembly protein IscA. This clade is limited to the proteobacteria.
Probab=27.27 E-value=60 Score=27.30 Aligned_cols=65 Identities=20% Similarity=0.340 Sum_probs=42.1
Q ss_pred CCCeEEEEcCCCChhhhhhhhh--hhcCCe--EEcCCCCccccC--ccCcccccceEEEeCCCCccccccCC
Q 011469 119 SKPLVLWLNGGPGCSSLGYGAM--EELGPF--RVNSDGKTLYRN--EYAWNNVANVLFLETPAGVGFSYSNT 184 (485)
Q Consensus 119 ~~PlvLWLnGGPGcSSl~~G~~--~E~GP~--~v~~~~~~l~~N--~~sWn~~anvLflDqPvGvGFSy~~~ 184 (485)
..+|=|-+.+| |||++.|++- .|..+- .+..+|-++... ...+-+-+-|=|+|.+.|.||...|+
T Consensus 21 ~~~lRi~v~~~-GCsG~~y~l~l~~~~~~~D~v~~~~g~~v~id~~s~~~l~g~~IDy~~~~~~~~F~~~nP 91 (105)
T TIGR02011 21 GFGLRLGVKTS-GCSGMAYVLEFVDEPTPDDIVFEDKGVKIVIDGKSLQYLDGTQLDFVKEGLNEGFKFTNP 91 (105)
T ss_pred CceEEEEEeCC-CCCCEEEEeeecCCCCCCCEEEEcCCEEEEEcHHHhHHhCCCEEEEecCCCcceEEEECC
Confidence 34667777776 9999657664 354443 334444333333 34456667888999999999998664
No 210
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=27.17 E-value=94 Score=33.70 Aligned_cols=73 Identities=19% Similarity=0.181 Sum_probs=50.0
Q ss_pred cceEEEeCCCCccccccC-----CCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHH
Q 011469 166 ANVLFLETPAGVGFSYSN-----TSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILS 240 (485)
Q Consensus 166 anvLflDqPvGvGFSy~~-----~~~~~~~~~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~ 240 (485)
|.|+.||. .==|-|.-. ..-.+ -+..++-.|+.+|++.--.+|+.-.+.+++.+|-||.|-...-+-.+.++
T Consensus 119 A~v~~lEH-RFYG~S~P~~~~st~nlk~--LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPe 195 (514)
T KOG2182|consen 119 ATVFQLEH-RFYGQSSPIGDLSTSNLKY--LSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPE 195 (514)
T ss_pred CeeEEeee-eccccCCCCCCCcccchhh--hhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCch
Confidence 66888885 333333110 01112 26678889999998888888975445599999999999877777666665
Q ss_pred c
Q 011469 241 K 241 (485)
Q Consensus 241 ~ 241 (485)
-
T Consensus 196 l 196 (514)
T KOG2182|consen 196 L 196 (514)
T ss_pred h
Confidence 5
No 211
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=26.97 E-value=50 Score=29.17 Aligned_cols=17 Identities=41% Similarity=0.635 Sum_probs=14.6
Q ss_pred CCCCCeEEEEcCCCChh
Q 011469 117 SSSKPLVLWLNGGPGCS 133 (485)
Q Consensus 117 ~~~~PlvLWLnGGPGcS 133 (485)
..++||||=|+|.||+-
T Consensus 49 ~p~KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTG 65 (127)
T ss_pred CCCCCEEEEeecCCCCc
Confidence 46789999999999973
No 212
>COG3896 Chloramphenicol 3-O-phosphotransferase [Defense mechanisms]
Probab=26.57 E-value=45 Score=30.87 Aligned_cols=28 Identities=36% Similarity=0.615 Sum_probs=21.7
Q ss_pred CCCeEEEEcCCC--Chhhhhhhhhhhc--CCeE
Q 011469 119 SKPLVLWLNGGP--GCSSLGYGAMEEL--GPFR 147 (485)
Q Consensus 119 ~~PlvLWLnGGP--GcSSl~~G~~~E~--GP~~ 147 (485)
.+--|+.||||| |-||+. -+|||+ |||.
T Consensus 21 ~~griVlLNG~~saGKSSiA-~A~Q~~~a~pwm 52 (205)
T COG3896 21 PEGRIVLLNGGSSAGKSSIA-LAFQDLAAEPWM 52 (205)
T ss_pred CCceEEEecCCCccchhHHH-HHHHHHhhcchh
Confidence 334578899997 778996 899987 7764
No 213
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=26.13 E-value=46 Score=34.91 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=23.4
Q ss_pred CeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccccccc
Q 011469 218 DFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNL 264 (485)
Q Consensus 218 ~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~~ 264 (485)
++.++||||||--+-+.+..- ..++..++-+||+-|..
T Consensus 229 ~i~~~GHSFGGATa~~~l~~d---------~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALRQD---------TRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEETHHHHHHHHHHHH----------TT--EEEEES---TTS-
T ss_pred heeeeecCchHHHHHHHHhhc---------cCcceEEEeCCcccCCC
Confidence 689999999998666544432 23788888899988754
No 214
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=26.04 E-value=93 Score=30.24 Aligned_cols=44 Identities=16% Similarity=0.184 Sum_probs=35.4
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHH
Q 011469 194 NNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTI 238 (485)
Q Consensus 194 ~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I 238 (485)
.++..|+.. -..|+++.|+-...++.++|-|+||+.+-.+|...
T Consensus 90 ~~~~~d~~a-~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~ 133 (236)
T COG0412 90 AEVLADIDA-ALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRA 133 (236)
T ss_pred HHHHHHHHH-HHHHHHhCCCCCCceEEEEEEcccHHHHHHhhccc
Confidence 566777776 55688888887778899999999999887777654
No 215
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=25.42 E-value=2.1e+02 Score=28.70 Aligned_cols=95 Identities=24% Similarity=0.294 Sum_probs=56.7
Q ss_pred CCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCccCcccccceEEEeCCCCcc--ccccCCCCCCCCCCC
Q 011469 116 SSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVG--FSYSNTSSDYSNPGD 193 (485)
Q Consensus 116 ~~~~~PlvLWLnGGPGcSSl~~G~~~E~GP~~v~~~~~~l~~N~~sWn~~anvLflDqPvGvG--FSy~~~~~~~~~~~d 193 (485)
.++..|+|+|=-=|-.|||.+++.|.|. +. | ++ -.-+.-+| .|-| -|+-. .-
T Consensus 20 s~s~~P~ii~HGigd~c~~~~~~~~~q~-----------l~-~-~~---g~~v~~le--ig~g~~~s~l~--------pl 73 (296)
T KOG2541|consen 20 SPSPVPVIVWHGIGDSCSSLSMANLTQL-----------LE-E-LP---GSPVYCLE--IGDGIKDSSLM--------PL 73 (296)
T ss_pred CcccCCEEEEeccCcccccchHHHHHHH-----------HH-h-CC---CCeeEEEE--ecCCcchhhhc--------cH
Confidence 3444899999776999999666777652 22 2 11 11233344 4444 22221 33
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHc
Q 011469 194 NNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSK 241 (485)
Q Consensus 194 ~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~ 241 (485)
.+.++-+.+.+. ..|++ +.-++|.|.|=||-..-++++.....
T Consensus 74 ~~Qv~~~ce~v~----~m~~l-sqGynivg~SQGglv~Raliq~cd~p 116 (296)
T KOG2541|consen 74 WEQVDVACEKVK----QMPEL-SQGYNIVGYSQGGLVARALIQFCDNP 116 (296)
T ss_pred HHHHHHHHHHHh----cchhc-cCceEEEEEccccHHHHHHHHhCCCC
Confidence 344555555444 45555 35899999999999877777766443
No 216
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=24.86 E-value=62 Score=30.53 Aligned_cols=23 Identities=39% Similarity=0.833 Sum_probs=17.4
Q ss_pred CCCCeEEEEcC--CCChhhhhhhhhh
Q 011469 118 SSKPLVLWLNG--GPGCSSLGYGAME 141 (485)
Q Consensus 118 ~~~PlvLWLnG--GPGcSSl~~G~~~ 141 (485)
..+|.+|||.| |-|=|.++ .++.
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA-~ale 44 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIA-NALE 44 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHH-HHHH
Confidence 67799999999 66777775 5544
No 217
>COG0218 Predicted GTPase [General function prediction only]
Probab=23.75 E-value=1.1e+02 Score=29.16 Aligned_cols=59 Identities=22% Similarity=0.398 Sum_probs=36.7
Q ss_pred CCCeEEEEcC-CCChhhhhhhhhhh-cCCeEE-cCCCCccccCccCcccccceEEEeCCCCccccccC
Q 011469 119 SKPLVLWLNG-GPGCSSLGYGAMEE-LGPFRV-NSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSN 183 (485)
Q Consensus 119 ~~PlvLWLnG-GPGcSSl~~G~~~E-~GP~~v-~~~~~~l~~N~~sWn~~anvLflDqPvGvGFSy~~ 183 (485)
+.|=|.+.-. ==|=||+ +=.+.- -+=-|+ +.-|+|-..|-+.|+.. +.+||-| ||.|+.
T Consensus 23 ~~~EIaF~GRSNVGKSSl-IN~l~~~k~LArtSktPGrTq~iNff~~~~~--~~lVDlP---GYGyAk 84 (200)
T COG0218 23 DLPEIAFAGRSNVGKSSL-INALTNQKNLARTSKTPGRTQLINFFEVDDE--LRLVDLP---GYGYAK 84 (200)
T ss_pred CCcEEEEEccCcccHHHH-HHHHhCCcceeecCCCCCccceeEEEEecCc--EEEEeCC---Cccccc
Confidence 3344444432 3477888 344443 222233 23366788898888887 8899988 888876
No 218
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=23.29 E-value=93 Score=28.65 Aligned_cols=39 Identities=5% Similarity=-0.037 Sum_probs=27.8
Q ss_pred CCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccc
Q 011469 216 NRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 261 (485)
Q Consensus 216 ~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id 261 (485)
..+.+|.|||.|+.-+-..+. .+. ..+++|+++..|+-.
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~--~~~-----~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLA--EQS-----QKKVAGALLVAPFDP 92 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHH--HTC-----CSSEEEEEEES--SC
T ss_pred CCCeEEEEeCHHHHHHHHHHh--hcc-----cccccEEEEEcCCCc
Confidence 568999999999986666554 222 456999999999843
No 219
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=23.26 E-value=48 Score=22.75 Aligned_cols=10 Identities=40% Similarity=1.278 Sum_probs=5.3
Q ss_pred eEEEEcCCCC
Q 011469 122 LVLWLNGGPG 131 (485)
Q Consensus 122 lvLWLnGGPG 131 (485)
=.||++|-||
T Consensus 26 RTiWFqGdPG 35 (39)
T PF09292_consen 26 RTIWFQGDPG 35 (39)
T ss_dssp -EEEESS---
T ss_pred CEEEeeCCCC
Confidence 4689999887
No 220
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=22.89 E-value=60 Score=36.15 Aligned_cols=40 Identities=10% Similarity=0.081 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHCCCCC-CCCeEEEeccccccchHHHHHH
Q 011469 198 EDSYTFLVNWFERFPQYK-NRDFFITGESYAGHYVPQLAYT 237 (485)
Q Consensus 198 ~d~~~fL~~f~~~fPey~-~~~~yI~GESYgG~YvP~lA~~ 237 (485)
++.+.=|++..|..=+.. ++++.|.|||+||.++-+|-+.
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 334344555555432223 5799999999999988887664
No 221
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=22.02 E-value=2.4e+02 Score=29.32 Aligned_cols=63 Identities=13% Similarity=0.073 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccc
Q 011469 196 TAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 261 (485)
Q Consensus 196 ~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id 261 (485)
-|+..-..|-+.+....+ ..||+-|.|+|.|++-+=.-...+.+++ ...+--.-+++|.|...
T Consensus 200 rA~~aG~~LA~~L~~~~~-G~RpVtLvG~SLGarvI~~cL~~L~~~~--~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 200 RAEKAGKVLADALLSRNQ-GERPVTLVGHSLGARVIYYCLLELAERK--AFGLVENVVLMGAPVPS 262 (345)
T ss_pred HHHHHHHHHHHHHHHhcC-CCCceEEEeecccHHHHHHHHHHHHhcc--ccCeEeeEEEecCCCCC
Confidence 445555556666655544 7899999999999999888888877764 11222234566666543
No 222
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.85 E-value=2.3e+02 Score=28.12 Aligned_cols=44 Identities=14% Similarity=0.160 Sum_probs=33.6
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccchHHHHHHHHHc
Q 011469 192 GDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSK 241 (485)
Q Consensus 192 ~d~~~A~d~~~fL~~f~~~fPey~~~~~yI~GESYgG~YvP~lA~~I~~~ 241 (485)
+.++.|+.-.+-|+ +.-|+ -|.+|.|.|+||..+=.+|.++..+
T Consensus 46 ~l~~~a~~yv~~Ir---~~QP~---GPy~L~G~S~GG~vA~evA~qL~~~ 89 (257)
T COG3319 46 SLDDMAAAYVAAIR---RVQPE---GPYVLLGWSLGGAVAFEVAAQLEAQ 89 (257)
T ss_pred CHHHHHHHHHHHHH---HhCCC---CCEEEEeeccccHHHHHHHHHHHhC
Confidence 44555555555444 56775 3999999999999999999998876
No 223
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. This family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases. N-4 cytosine-specific DNA methylases (2.1.1.113 from EC) [] are enzymes that specifically methylate the amino group at the C-4 position of cytosines in DNA. Such enzymes are found as components of type II restriction-modification systems in prokaryotes. Such enzymes recognise a specific sequence in DNA and methylate a cytosine in that sequence. By this action they protect DNA from cleavage by type II restriction enzymes that recognise the same sequence. N-6 adenine-specific DNA methylases (2.1.1.72 from EC) (A-Mtase) are enzymes that specifically methylate the amino group at the C-6 position of adenines in DNA. Such enzymes are found in the three existing types of bacterial restriction-modification systems (in type I system the A-Mtase is the product of the hsdM gene, and in type III it is the product of the mod gene). All of these enzymes recognise a specific sequence in DNA and methylate an adenine in that sequence.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2ZIF_A 2ZIE_A 2ZIG_A 1NW6_A 1NW8_A 1NW7_A 1NW5_A 1EG2_A 1BOO_A 1G60_B ....
Probab=21.85 E-value=1e+02 Score=28.55 Aligned_cols=59 Identities=22% Similarity=0.471 Sum_probs=31.1
Q ss_pred ceEEEeCCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCC-CC-CCCeEEE-ecccccc
Q 011469 167 NVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQ-YK-NRDFFIT-GESYAGH 229 (485)
Q Consensus 167 nvLflDqPvGvGFSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fPe-y~-~~~~yI~-GESYgG~ 229 (485)
++++.|+|=++|..|.... . .++....++..+++..|+...-+ ++ +.-++|. |.+.-..
T Consensus 2 dliitDPPY~~~~~~~~~~-~---~~~~~~~~~y~~~~~~~~~~~~rvLk~~g~~~i~~~~~~~~~ 63 (231)
T PF01555_consen 2 DLIITDPPYNIGKDYNNYF-D---YGDNKNHEEYLEWMEEWLKECYRVLKPGGSIFIFIDDREIAG 63 (231)
T ss_dssp EEEEE---TSSSCS------C---SCHCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE-CCEECT
T ss_pred CEEEECCCCCCCCCcchhh-h---ccCCCCHHHHHHHHHHHHHHHHhhcCCCeeEEEEecchhhhH
Confidence 6899999999999973221 1 25556677888888887764311 22 2234444 5555444
No 224
>PRK06762 hypothetical protein; Provisional
Probab=21.65 E-value=54 Score=29.39 Aligned_cols=13 Identities=15% Similarity=0.493 Sum_probs=11.1
Q ss_pred CeEEEEcCCCChh
Q 011469 121 PLVLWLNGGPGCS 133 (485)
Q Consensus 121 PlvLWLnGGPGcS 133 (485)
|.++|+.|.|||-
T Consensus 2 ~~li~i~G~~GsG 14 (166)
T PRK06762 2 TTLIIIRGNSGSG 14 (166)
T ss_pred CeEEEEECCCCCC
Confidence 7899999988863
No 225
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=21.15 E-value=97 Score=29.03 Aligned_cols=36 Identities=14% Similarity=0.085 Sum_probs=28.2
Q ss_pred CCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccc
Q 011469 216 NRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (485)
Q Consensus 216 ~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~ 259 (485)
.++.||.+||.|+--+-..+.++-.+ ++|+++..|.
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~~--------V~GalLVApp 93 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQRQ--------VAGALLVAPP 93 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhhc--------cceEEEecCC
Confidence 57899999999998777777766554 8999886553
No 226
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=20.83 E-value=89 Score=33.65 Aligned_cols=74 Identities=24% Similarity=0.259 Sum_probs=49.2
Q ss_pred CcEEEEEecCCccccCchhHHHHHHHcCCCCCccccccccCCccceEEEeec---ceEEEEEcCCC---ccCCccChHHH
Q 011469 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLGYK---GVIFTTVRGAG---HLVPTYQPQRA 469 (485)
Q Consensus 396 girVlIysGd~D~i~p~~gt~~~i~~L~w~~~~~~~~w~~~~~v~Gy~~~y~---~Ltf~~V~gAG---HmVP~dqP~~a 469 (485)
+++=.++.||=|..+|..+. .+.. +|.+++.. .+ +. +.+.+. .+.+.-..|+- |.--.-.+ +.
T Consensus 373 ~~~~~~~~~DGDgTVp~~S~-~~c~--~w~g~~~~-----~~-~~-~~~~~~~~~~~~~~~~~G~~~a~Hv~ilg~~-~l 441 (473)
T KOG2369|consen 373 GLKGGIFYGDGDGTVPLVSA-SMCA--NWQGKQFN-----AG-IA-VTREEDKHQPVNLDESHGSSSAEHVDILGDE-EL 441 (473)
T ss_pred cccCceeecCCCCccchHHH-Hhhh--hhhccccc-----cc-cc-cccccccCCCccccccCCccchhhhhhccCh-HH
Confidence 46667999999999999998 5555 88888644 11 11 333332 37777778877 87766665 45
Q ss_pred HHHHHHHHcCC
Q 011469 470 LIMISSFLEGK 480 (485)
Q Consensus 470 l~l~~~fl~g~ 480 (485)
++.+.+.+.|.
T Consensus 442 ~e~i~k~~~g~ 452 (473)
T KOG2369|consen 442 LEEILKVLLGA 452 (473)
T ss_pred HHHHHHHhccC
Confidence 56666666553
No 227
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=20.56 E-value=42 Score=23.54 Aligned_cols=19 Identities=21% Similarity=-0.090 Sum_probs=15.4
Q ss_pred hhHHHHHhChHHHHHHhcC
Q 011469 347 DKYVNSYLNLAEVQAALHA 365 (485)
Q Consensus 347 ~~~~~~ylN~~~Vq~AL~v 365 (485)
.-.+-.-|++||||++|++
T Consensus 13 l~gl~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 13 LFGLLRALRDPDVQRGLGF 31 (42)
T ss_pred HHHHHHHHcCHHHHHHHHH
Confidence 3456678999999999986
No 228
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=20.33 E-value=2.6e+02 Score=27.44 Aligned_cols=58 Identities=19% Similarity=0.413 Sum_probs=43.2
Q ss_pred hhHHHHHHHHHHHHHH-CCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEeccccccc
Q 011469 195 NTAEDSYTFLVNWFER-FPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (485)
Q Consensus 195 ~~A~d~~~fL~~f~~~-fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~ 262 (485)
+.++++..|+++++.. +.+ ....+-|. |||---|.=+..+.+.. ++.|++||.+.+++
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~------~vDG~LVG~Asl~~ 234 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP------DIDGVLVGGASLKA 234 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC------CCCEEEeehHhhCH
Confidence 4688999999999974 322 22333333 99999999888887752 48999999999874
No 229
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=20.25 E-value=2.8e+02 Score=27.32 Aligned_cols=60 Identities=17% Similarity=0.319 Sum_probs=43.9
Q ss_pred hhhHHHHHHHHHHHHHH-CCCCCCCCeEEEeccccccchHHHHHHHHHcCCCCceeeeeeeEecccccccc
Q 011469 194 NNTAEDSYTFLVNWFER-FPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (485)
Q Consensus 194 ~~~A~d~~~fL~~f~~~-fPey~~~~~yI~GESYgG~YvP~lA~~I~~~n~~~~~inLkGi~iGNg~id~~ 263 (485)
.+.++++..|+++++.. |. -...++-|. |||---|.=+..+... .++.|++||.+.+++.
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~------~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 179 PEQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ------PDIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC------CCCCEEEEeeeeechH
Confidence 35788999999999863 32 112233333 9999999999888664 4589999999998653
Done!