BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011472
(485 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224138178|ref|XP_002322749.1| predicted protein [Populus trichocarpa]
gi|222867379|gb|EEF04510.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/460 (52%), Positives = 310/460 (67%), Gaps = 10/460 (2%)
Query: 28 SYSTA-TGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQL 86
SYST TG + + T +M LY +S + D ++ L+ WV EG+P++ QL
Sbjct: 41 SYSTTPTGRTKKPWT------DAMNVLYNRISSLADQRITISLFLNHWVLEGQPVNKNQL 94
Query: 87 RIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVP 146
R IK+ R +KR++HAL+IS WMT F L DVA++LDLI+KV GIEQA FN P
Sbjct: 95 REFIKELRFHKRYAHALEISTWMTDSGYFELASQDVAVQLDLISKVHGIEQAQKLFNNTP 154
Query: 147 EKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKL 206
+ LK+ VY ALLN YA AK EKAE ++Q+M+ G + YN ++N YYQTGN K+
Sbjct: 155 QHLKVLKVYSALLNCYAKAKLVEKAESVVQEMKSLGFANTLLVYNVILNFYYQTGNPDKI 214
Query: 207 DSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAAS 266
+SLM EME+ GI CDK+ SI LSA A+ SD GI+K +A ME+D V LDWT Y AA
Sbjct: 215 NSLMQEMEQNGIGCDKFAHSIQLSAYASVSDIVGIEKTLAKMESDPNVFLDWTSYTAAAK 274
Query: 267 GYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKV 326
GY+K GL DKAL +L KSE L+ + AYD +IT YAA G ++VLR+W+ YK+N KV
Sbjct: 275 GYIKVGLVDKALEMLEKSERLVTGKRRGTAYDSLITLYAATGKTNEVLRIWELYKKNEKV 334
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNL-CHDIRIPNHLIDAYCRRGLLHKAETL 385
Y YI +I+SLLK D E+AEKIFEEWE +N C+DI IPN LIDAY R+GL+ KAETL
Sbjct: 335 YKEAYISIITSLLKLDDFENAEKIFEEWEFQNHSCYDIHIPNFLIDAYSRKGLVEKAETL 394
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACL 445
I +A +G EPN +TWY +ATGYLQN Q+ K VEAMKKA+V+ +G WKPS E LA CL
Sbjct: 395 IDRAISKGGEPNAKTWYHLATGYLQNGQTLKAVEAMKKAVVV--SGRMWKPSNEILANCL 452
Query: 446 GYYKKERDIEGADYFIKLLTGKEIISADLQDRLLNNIRNG 485
GY K E D+ F+ LL +IIS D+Q+RLLN+I+N
Sbjct: 453 GYLKVEGDLGKLTNFMDLLRDNDIISLDIQERLLNHIKNA 492
>gi|224138182|ref|XP_002322750.1| predicted protein [Populus trichocarpa]
gi|222867380|gb|EEF04511.1| predicted protein [Populus trichocarpa]
Length = 516
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/423 (53%), Positives = 299/423 (70%), Gaps = 4/423 (0%)
Query: 62 DPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPAD 121
D N S++P+LD+W++EG + + + +IK+ R Y+R+ HAL+ISMWMT K LT
Sbjct: 57 DHNVSVIPVLDKWIQEGETIWEDLIHALIKELRQYRRYHHALEISMWMTDKRYLALTSRA 116
Query: 122 VAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDR 181
VA+RLDLI+KV GIEQ +YFN +P KLK Y ALLN YA KS EKAE +MQ+MR+
Sbjct: 117 VAVRLDLISKVHGIEQVENYFNNIPTKLKGLESYGALLNCYAYVKSVEKAEAVMQRMREL 176
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
G +K + + M+N+YY+TGN +KLD LM EMEE GI DK+ + I LS+ AAASD EG+
Sbjct: 177 GFARKPLVFTVMLNLYYKTGNTEKLDPLMREMEENGISFDKFAYCIRLSSYAAASDSEGL 236
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVI 301
+K + +E+D VVLDW YAT A+GY K GL DKAL +L++ E L+ + S YD+++
Sbjct: 237 EKTLKRIESDPNVVLDWATYATVANGYSKVGLLDKALEMLKRCERLITGERRSTPYDYLM 296
Query: 302 TQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
TQYA G K+DVLRVW+ +K+ V NR I VI+SLLKFD +ESAEKIFEEWES+ LC
Sbjct: 297 TQYATTGTKEDVLRVWELHKR--YVGNRKNISVITSLLKFDDLESAEKIFEEWESQKLCD 354
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
DI IPN L+DAY R+GLL KAE L+ + GT+PN TWYL+A GYLQ+NQ+ K VEAM
Sbjct: 355 DIIIPNFLVDAYSRKGLLEKAEMLLQRTMSNGTKPNANTWYLLAKGYLQHNQTPKAVEAM 414
Query: 422 KKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLLNN 481
K+ +VL +G R +PS ACL + K D++ A+ FI LL K+IIS D+QD+LL+
Sbjct: 415 KEMIVL--SGPRSRPSTVSWVACLQHLKDSGDMDNAEGFINLLREKDIISLDIQDKLLSY 472
Query: 482 IRN 484
I++
Sbjct: 473 IKD 475
>gi|225446335|ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial [Vitis vinifera]
Length = 499
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/444 (46%), Positives = 285/444 (64%), Gaps = 3/444 (0%)
Query: 41 TISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFS 100
T +L + L +SP D S+VP L+QW +EGR + + L +I+K R +KR++
Sbjct: 25 TETLTSNAPKESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYN 84
Query: 101 HALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLN 160
HAL+I W+ K F ++P DVAI+LDLI+KV G+EQA YFN P L+ VY ALLN
Sbjct: 85 HALEIYEWIRDKFYFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLN 144
Query: 161 AYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
Y+ KS EKAE IMQ+MRD G VK T+ YN M+ +Y + G ++KLD+LM EMEE GI
Sbjct: 145 CYSQKKSLEKAEAIMQEMRDMGFVK-TLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGL 203
Query: 221 DKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV 280
D +T+ I L+A A SD EG++K++ +E D V DW Y AA+GY+KA L +KA+ +
Sbjct: 204 DSFTYCIRLNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEM 263
Query: 281 LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLK 340
L+KSE + Y+ ++T YA GNK +V R+W YK K +N GY+ ++SSLLK
Sbjct: 264 LKKSEQFISGRSRRFGYEILLTLYATMGNKTEVYRIWNLYKTIGKFFNTGYVAMVSSLLK 323
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
D M+ AEK FEEW S N D R+PN LI AYC++GLL KAE L+ +A +G EP T
Sbjct: 324 LDDMDGAEKTFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVT 383
Query: 401 WYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYF 460
W +A GY +NNQ EK V+ +KKAL+ G WKP+ L+ACL Y K + D+E A+
Sbjct: 384 WDALAAGYHENNQMEKAVDTLKKALLATSQG--WKPNPVTLSACLEYLKGKGDVEEAENL 441
Query: 461 IKLLTGKEIISADLQDRLLNNIRN 484
I+LL + ++SA DRL+N IR+
Sbjct: 442 IRLLREQSLVSAYDSDRLVNYIRS 465
>gi|359497206|ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/381 (51%), Positives = 262/381 (68%), Gaps = 2/381 (0%)
Query: 105 ISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYAC 164
IS WM+ K L P D+A+R++LI KV G+EQ +YFN + + LK VYIALLN YA
Sbjct: 102 ISQWMSDKRYIPLMPRDIALRMNLILKVHGLEQVENYFNNIHKNLKTYQVYIALLNCYAL 161
Query: 165 AKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYT 224
KS +KAE IMQ++RD G V+ + YN++MNVYY+ GN++KLD LMHEMEEKGI CDK+T
Sbjct: 162 EKSVDKAEAIMQRLRDLGFVRTALGYNTLMNVYYRMGNWEKLDILMHEMEEKGIFCDKFT 221
Query: 225 FSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS 284
+I LSA AAAS+ GID IV ME+D ++LDW YA A GY+K GL DK L +++K
Sbjct: 222 LAIRLSAYAAASNIVGIDNIVTRMESDPRIILDWNSYAVVAHGYLKVGLVDKTLVMMKKL 281
Query: 285 EVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGM 344
E L+ + A+D ++ YA +D++ RVW YK+ K+YN+GY+ +ISSLLKFD +
Sbjct: 282 EELIDAKGSNVAFDNLLKLYAETRQRDELDRVWMLYKKKEKIYNKGYMAMISSLLKFDDI 341
Query: 345 ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
++AEK+ EEWESR L +D R+PN LIDAYCR+GL KAE L+ K +G P V TW+ +
Sbjct: 342 DAAEKVLEEWESRRLSYDFRVPNFLIDAYCRKGLTEKAEALVNKILTKGGNPLVDTWFYL 401
Query: 405 ATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
A GYL+++Q K VEA+KKA+V+ WKPSK LA CL Y + RD+EGA FI+ L
Sbjct: 402 ANGYLEDSQIPKAVEALKKAVVV--CPPNWKPSKNTLATCLEYLEGNRDVEGAGEFIRFL 459
Query: 465 TGKEIISADLQDRLLNNIRNG 485
+ I S + RLL+ I NG
Sbjct: 460 QNEGIFSVGVCKRLLSYIENG 480
>gi|147775992|emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
Length = 499
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/444 (46%), Positives = 284/444 (63%), Gaps = 3/444 (0%)
Query: 41 TISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFS 100
T +L + L +SP D S+VP L+QW +EGR + + L +I+K R +KR++
Sbjct: 25 TETLTSNAPKESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYN 84
Query: 101 HALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLN 160
HAL+I W+ K F ++P DVAI+LDLI+KV G+EQA YFN P L+ VY ALLN
Sbjct: 85 HALEIYEWIRDKFYFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLN 144
Query: 161 AYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
Y+ KS EKAE IMQ+MRD G VK T+ YN M+ +Y + G ++KLD+LM EMEE GI
Sbjct: 145 CYSQKKSLEKAEAIMQEMRDMGFVK-TLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGL 203
Query: 221 DKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV 280
D +T+ I L+A A SD EG++K++ +E D V DW Y AA+GY+KA L +KA+ +
Sbjct: 204 DSFTYCIRLNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEM 263
Query: 281 LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLK 340
L+KSE + Y+ ++T YA GNK + R+W YK K +N GY+ ++SSLLK
Sbjct: 264 LKKSEQFISGRSRRFGYEILLTLYATMGNKTEXYRIWNLYKTIGKFFNTGYVAMVSSLLK 323
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
D M+ AEK FEEW S N D R+PN LI AYC++GLL KAE L+ +A +G EP T
Sbjct: 324 LDDMDGAEKTFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVT 383
Query: 401 WYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYF 460
W +A GY +NNQ EK V+ +KKAL+ G WKP+ L+ACL Y K + D+E A+
Sbjct: 384 WDALAAGYHENNQMEKAVDTLKKALLATSQG--WKPNPVTLSACLEYLKGKXDVEEAENL 441
Query: 461 IKLLTGKEIISADLQDRLLNNIRN 484
I+LL + ++SA DRL+N IR+
Sbjct: 442 IRLLREQSLVSAYDSDRLVNYIRS 465
>gi|255553771|ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542908|gb|EEF44444.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/432 (44%), Positives = 280/432 (64%), Gaps = 2/432 (0%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY +S G P+ S+VP+L++W+EEG + +L+ +K+ R Y+RF+HALQ+S WMT K
Sbjct: 41 LYGRISKAGKPSISIVPILEKWLEEGNDVKKPELQKFVKQLRKYRRFTHALQVSEWMTDK 100
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
L P DVA+RLDLI+KV G+ +A YFN +P+ + VY ALLN A +K KAE
Sbjct: 101 KGCSLLPGDVAVRLDLISKVHGLVKAEEYFNSIPDTSRDRQVYGALLNCCAHSKLLGKAE 160
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
MQ+M+D G VK ++ YN M+++Y GNY+KLD L+ EMEE GI CD+ T+ I L+AC
Sbjct: 161 ATMQKMKDLGFVKNSLSYNVMLSLYSHMGNYEKLDPLVQEMEENGISCDRITYCIRLNAC 220
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
+SD EG++K++ ME D + + + Y AA+GY+KAGL DK L +L++SE L+ N
Sbjct: 221 VNSSDIEGMEKLLMKMEVDPNISVGFHAYVIAANGYLKAGLVDKTLIMLKRSEQLISGNT 280
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
AY+F++T Y A GNK +V R+W +YK+ + +N GYIC+ISSLLK D ++ AE+IFE
Sbjct: 281 RRFAYEFLLTLYTASGNKAEVYRIWNKYKEIGRFFNSGYICMISSLLKLDDIDGAERIFE 340
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
EW+S+ + DIRIPN +++ Y R+G L KAET I K G EP+ +W +A GY +
Sbjct: 341 EWDSKKVLFDIRIPNSMVNVYSRKGHLEKAETYINKIVASGEEPDATSWNHLAAGYHSSG 400
Query: 413 QSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISA 472
Q K VE ++KA+ + + G WKPS L+ACL + K + D E + +K+ SA
Sbjct: 401 QMTKAVETIRKAISVSKPG--WKPSLLTLSACLEFLKGQGDAETLEELLKIAKEHCCFSA 458
Query: 473 DLQDRLLNNIRN 484
+L + I N
Sbjct: 459 GAYAKLSSCIDN 470
>gi|449523946|ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 461
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/417 (45%), Positives = 284/417 (68%), Gaps = 7/417 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LYR +SP+GDPN S+ PLLDQWV EGR + ++LR IIK+ R+YKRF HAL+IS WM+ K
Sbjct: 31 LYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMSDK 90
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
F L+ AD+AIR++LI +V G+EQ YF+ +P +LK V+IALLN YA K +KA
Sbjct: 91 RYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCVDKAN 150
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
MQ++++ G + YN MMN+Y+Q G +++LDSL+ EM+E+G+ D++T+SI +SA
Sbjct: 151 AFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSIRISAY 210
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH-N 291
AAASD GI+KI+ ME++ +VLDW Y AA+ Y K GL DK++++L+KSE L+ +
Sbjct: 211 AAASDFRGIEKIMEQMESNPSIVLDWNCYVIAANAYNKVGLIDKSISMLKKSEGLLANVK 270
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
K A++ + YA G KD++ R+W YK+ K++N+G+I +I+SLL D ++ AE+I+
Sbjct: 271 KKGFAFNVYLKLYARNGKKDEIHRIWNLYKKE-KIFNKGFISMITSLLILDDIKGAERIY 329
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
+EWE+R L +D+RIPN L+DAYCR GL+ KAE L+ + + + +V +W +A+GYLQ
Sbjct: 330 KEWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFSVESWCYLASGYLQK 389
Query: 412 NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKE 468
+Q + VE +K A + +R KE LAA L ++D+E + + LL K+
Sbjct: 390 DQLPQAVETLKLAASV--CPSRLNYVKEILAAFLD---GKQDVEETEKVVNLLREKD 441
>gi|449438086|ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 486
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 186/444 (41%), Positives = 284/444 (63%), Gaps = 2/444 (0%)
Query: 41 TISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFS 100
T SL S+ L+R + GDP S+V +LDQWVEEGR ++ L+ +IK+ R + RF+
Sbjct: 26 TKSLPSPSTEDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVNQSDLQKLIKQLRTFGRFN 85
Query: 101 HALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLN 160
HALQ+ W + N +P +AI+L LI+K +G+EQA YF+ + E + VY ALL+
Sbjct: 86 HALQLCEWERNERNKCPSPGHIAIQLHLISKARGLEQAEEYFSSIGESSRDHKVYGALLH 145
Query: 161 AYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
Y K+ +KAE IMQ+MR+ G +K + YN+M+N+Y Q G ++KLD L+ EMEE GI
Sbjct: 146 CYVENKNLKKAEAIMQKMREVGFMKTPLSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGH 205
Query: 221 DKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV 280
+++T+++ ++A AAASD ++K+++ MEAD V DW +Y T +GY KAGLS+ ++++
Sbjct: 206 NRFTYNVRMNAYAAASDITNMEKLLSKMEADPLVATDWHIYFTVGNGYFKAGLSENSISM 265
Query: 281 LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLK 340
L+K+E L+ + AY +++T YAA GNKD+V RVW Y K +N GY+C+ISSL+K
Sbjct: 266 LKKAEQLIGDKQKWLAYQYLMTLYAAIGNKDEVYRVWNLYTNLQKRFNSGYLCIISSLMK 325
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
D ++ AE+I +EWES + D +IPN +I++YC +G + KAE I + G EP
Sbjct: 326 LDDIDGAERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRAYA 385
Query: 401 WYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYF 460
W +A+GY N + K E +KKA+ + + RWKP+ + LAACL Y K ++E A+
Sbjct: 386 WDRLASGYHSNGLTNKAAETLKKAISV--SPPRWKPNYDILAACLEYLKTNGNVELAEEI 443
Query: 461 IKLLTGKEIISADLQDRLLNNIRN 484
I LL ++I ++ RL + I +
Sbjct: 444 IGLLCKRDIFPLNICKRLEDYIHS 467
>gi|449479000|ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 493
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 185/444 (41%), Positives = 277/444 (62%), Gaps = 2/444 (0%)
Query: 41 TISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFS 100
T SL S+ L+R + GDP S+V +LDQWVEEGR + L+ +IK+ R + RF+
Sbjct: 26 TKSLPSPSTEDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVKQSDLQTLIKQLRKFGRFN 85
Query: 101 HALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLN 160
ALQ+ W+ + N L+ D+A+ L LI+K +G+EQA YF+ + E + VY ALL+
Sbjct: 86 QALQLCEWVRNERNQCLSTGDIAVELHLISKARGLEQAEKYFSSIGESSRDHKVYGALLH 145
Query: 161 AYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
Y K+ +KAE IMQ+MR+ G +K + YN+M+N+Y G ++KL L+ EMEE GI
Sbjct: 146 CYVENKNLKKAEAIMQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGP 205
Query: 221 DKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV 280
D++T++I ++A AAASD ++K+++ MEAD V DW Y +GY KAGLS+ ++ +
Sbjct: 206 DRFTYNIRMNAYAAASDITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGLSENSILM 265
Query: 281 LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLK 340
L+K+E + + AY +++T YAA GNKD+V RVW Y K +N GY+C+ISSL+K
Sbjct: 266 LKKAEQFIGDKQKWLAYQYLMTLYAAIGNKDEVYRVWNLYTNLRKRFNSGYLCIISSLMK 325
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
D ++ AE+I +EWES + D RIPN +I++YC +G + KAE I + G EP T
Sbjct: 326 LDDIDGAERILKEWESGDTSFDFRIPNMMINSYCMKGFVDKAEAYINRLIETGKEPEANT 385
Query: 401 WYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYF 460
W L+A+GY N + K E +KKA+ + + WKP LAACL Y K +++ A+
Sbjct: 386 WDLLASGYHSNGLTNKVAETLKKAISV--SPPHWKPKYHILAACLEYLKTNENVDLAEEI 443
Query: 461 IKLLTGKEIISADLQDRLLNNIRN 484
I LL ++I ++ RL + IR+
Sbjct: 444 IGLLCKRDIFPLNICKRLEDYIRS 467
>gi|224121680|ref|XP_002330626.1| predicted protein [Populus trichocarpa]
gi|222872230|gb|EEF09361.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 176/418 (42%), Positives = 266/418 (63%), Gaps = 6/418 (1%)
Query: 57 LSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFV 116
+S G+P S++P+++QW++EG + L+ IK FR ++RFSHALQIS WM+ +
Sbjct: 10 ISRAGNPKVSIIPVIEQWLKEGNSIKQSDLQNFIKLFRRHRRFSHALQISQWMSDERGSE 69
Query: 117 LTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQ 176
+P D A+RLDLI+KV G+EQA Y+N +P+ L+ VY ALLN YA + EKAE MQ
Sbjct: 70 QSPGDFAVRLDLISKVHGLEQAEEYYNSIPDHLRGTQVYGALLNCYAHKRRLEKAEATMQ 129
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
+MR+ GLV +T+ YN M+++Y G Y+KL++L+ EMEEKG++ D YTF+I L A A S
Sbjct: 130 KMRELGLV-QTLSYNVMLSLYSHMGRYEKLEALVKEMEEKGVNSDIYTFNIRLHAYVATS 188
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE---VLMMHNKF 293
+ E ++K++ ME D + +D+ + A+GY+KAGL +K++ +L+++E V M+
Sbjct: 189 NIEEMEKLLMKMETDSLINIDFHTFFAVANGYLKAGLLEKSIVMLKRAEELTVPMVGTTK 248
Query: 294 SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEE 353
+ AY+ ++T Y + GNKD V RVW YK +++N YIC+I+SL++ ++ AE I EE
Sbjct: 249 AHAYEMLLTLYGSAGNKDGVYRVWNSYKNTGRIFNSTYICMINSLMRLGDIDGAEWISEE 308
Query: 354 WESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
W SR +DIRIPN +I AY R+GL KAE + K G + +W +ATGY Q
Sbjct: 309 WVSRKTLYDIRIPNTMIRAYSRKGLWKKAEEYVNKIVESGMQLEASSWDHLATGYHFGGQ 368
Query: 414 SEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIIS 471
K VE +KKA+ + + G WKP+ L CL Y + + D E A+ +K ++ +S
Sbjct: 369 MAKAVETLKKAISISKPG--WKPNPYTLKTCLWYLESKGDEEAAEELLKFVSEHHPVS 424
>gi|359485373|ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 461
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 179/433 (41%), Positives = 262/433 (60%), Gaps = 4/433 (0%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY + + DP S+ PLL+QW+EEG+ + QL+ +++ + ++RF HAL+IS WMT +
Sbjct: 24 LYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMTDR 83
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
F LTP+D AIRLDLI+ V G QA SYFN +P LK S Y ALL+ Y KS EKAE
Sbjct: 84 RYFTLTPSDAAIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKSVEKAE 143
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
MQ+MR+ + YN ++N+Y QTGN+ K+++L+ EM+ K I CD +T L+ A
Sbjct: 144 ATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRNLMVAY 203
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
AASD ++K + ME D + +DW +Y+ AASGY+K GL DKAL +L+K E H +
Sbjct: 204 VAASDISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPHLE 263
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
A+ F+++ YA G+K ++ RVW YK + + Y Y C+I+ L K D +E AEKIF+
Sbjct: 264 RLSAFKFLLSLYARTGHKQELYRVWNLYKPSYE-YPEAYSCMITCLTKLDDIEGAEKIFQ 322
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
EWE +D R+ N L+ AYC+R L KAE+L+ K + P TW ++A GY+++
Sbjct: 323 EWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKV-IEERMPYASTWNILAKGYVEDK 381
Query: 413 QSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISA 472
Q K VE +KKA+ + G W+P+ L AC+ Y + + ++E + +L I
Sbjct: 382 QMPKAVEMLKKAISVGRKG--WRPNSIILDACIEYLEGQGNLEEIEEIARLCKNLGIPDG 439
Query: 473 DLQDRLLNNIRNG 485
D+ RLL G
Sbjct: 440 DIHHRLLRTSAAG 452
>gi|224121672|ref|XP_002330624.1| predicted protein [Populus trichocarpa]
gi|222872228|gb|EEF09359.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 191/445 (42%), Positives = 270/445 (60%), Gaps = 2/445 (0%)
Query: 38 REVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYK 97
R + S + + L R +S + DP ++P++++WV+EG+ + L+ I+K R
Sbjct: 20 RALCFSTDTTAISHSLNRRISMVEDPMVPVIPVIEKWVQEGQVVTNSDLKHFIRKLRKIH 79
Query: 98 RFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIA 157
RFSHALQIS WM+ + L+P DVA+RLDLI+KV G+EQA +YFN VPE L+ VY A
Sbjct: 80 RFSHALQISQWMSDQRGHNLSPGDVAVRLDLISKVHGLEQAVTYFNSVPESLRGLEVYGA 139
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
LLN YA K E+AE M++MR+ G V+ + YN M+N+YYQ G Y+K+ LM EME+ G
Sbjct: 140 LLNCYAHYKHLEEAEATMRKMREMGFVRNVLSYNVMLNLYYQMGKYEKIQVLMQEMEKWG 199
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
I T+ ILL+A A S+ E I KI+ MEAD V +DW Y AA+GY+KAGL DK
Sbjct: 200 ICFSNITYKILLNAYVATSNIEEIKKILMKMEADPLVSIDWYAYVVAANGYLKAGLIDKT 259
Query: 278 LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISS 337
L +L +SE L+ A + +++ Y A GNK+ V RVW YK + N Y+C+I+S
Sbjct: 260 LTMLWRSEQLISGKSARFACETLLSLYTAVGNKEQVYRVWNLYKTKGRSLNSSYLCMINS 319
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
LLK D ++ AE+I+EEW S DIRIPN ++ AY ++GL KAE + K G +
Sbjct: 320 LLKLDDVDGAERIWEEWVSIVKFFDIRIPNVMVSAYSKKGLWEKAEAFVGKIVASGIKIE 379
Query: 398 VRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGA 457
T +ATGY Q K E +KKA+ + + G WKP+ LAACL Y K D++
Sbjct: 380 ASTLDRLATGYHVRGQMLKASETIKKAISISQPG--WKPNVYTLAACLEYLKGREDVKKI 437
Query: 458 DYFIKLLTGKEIISADLQDRLLNNI 482
+ +K+L +S+ DRL ++I
Sbjct: 438 EDPLKILKEHCHLSSVSYDRLNSSI 462
>gi|302143278|emb|CBI21839.3| unnamed protein product [Vitis vinifera]
Length = 501
Score = 343 bits (881), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 176/426 (41%), Positives = 259/426 (60%), Gaps = 4/426 (0%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY + + DP S+ PLL+QW+EEG+ + QL+ +++ + ++RF HAL+IS WMT +
Sbjct: 24 LYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMTDR 83
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
F LTP+D AIRLDLI+ V G QA SYFN +P LK S Y ALL+ Y KS EKAE
Sbjct: 84 RYFTLTPSDAAIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKSVEKAE 143
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
MQ+MR+ + YN ++N+Y QTGN+ K+++L+ EM+ K I CD +T L+ A
Sbjct: 144 ATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRNLMVAY 203
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
AASD ++K + ME D + +DW +Y+ AASGY+K GL DKAL +L+K E H +
Sbjct: 204 VAASDISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPHLE 263
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
A+ F+++ YA G+K ++ RVW YK + + Y Y C+I+ L K D +E AEKIF+
Sbjct: 264 RLSAFKFLLSLYARTGHKQELYRVWNLYKPSYE-YPEAYSCMITCLTKLDDIEGAEKIFQ 322
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
EWE +D R+ N L+ AYC+R L KAE+L+ K + P TW ++A GY+++
Sbjct: 323 EWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKV-IEERMPYASTWNILAKGYVEDK 381
Query: 413 QSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISA 472
Q K VE +KKA+ + G W+P+ L AC+ Y + + ++E + +L I
Sbjct: 382 QMPKAVEMLKKAISVGRKG--WRPNSIILDACIEYLEGQGNLEEIEEIARLCKNLGIPDG 439
Query: 473 DLQDRL 478
D+ R
Sbjct: 440 DIHHRF 445
>gi|255553773|ref|XP_002517927.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542909|gb|EEF44445.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 177/428 (41%), Positives = 262/428 (61%), Gaps = 3/428 (0%)
Query: 52 KLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTK 111
KLY + + DP +S++P+L+QWV EG + L+ ++ + YKRF+HAL++S WMT
Sbjct: 49 KLYDRIQIVRDPKESIIPVLNQWVSEGHTVGKALLQSLVHLMKGYKRFNHALEMSHWMTD 108
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
F L+P+DVA+RL+LI +V G A YF + +KLK +VY ALL+ Y S +KA
Sbjct: 109 CRYFSLSPSDVAVRLELIYRVYGSAHAEMYFEKISDKLKSGNVYGALLSGYVRENSVQKA 168
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E ++Q+MR++G+ + YN M+N+Y Q G ++K+D L EME GI DKYT L++A
Sbjct: 169 EAVLQEMREKGIATSSFPYNIMINLYAQNGAFEKIDILKEEMERNGIPQDKYTMRNLMAA 228
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
AASD G+++I+ +E + W Y+ AASGY+K GL +KAL +LRK E M
Sbjct: 229 YVAASDISGMERILNQLETHPQLGHGWQAYSVAASGYLKVGLIEKALKMLRKMEETMPIG 288
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
K + A+++++T YA G KD++ RVW YK +V + C+ISSL K D +E AE+IF
Sbjct: 289 KKTSAFNYLLTLYAKTGRKDELYRVWNSYKPLAEVKETQFCCMISSLEKVDDIEGAERIF 348
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
EEWES+ + +D R+ N L+ AYCR+G L+ +K G P TW MA Y+
Sbjct: 349 EEWESQCMMYDFRVLNKLLLAYCRKG-LYTKAEAAFKKAAEGRTPYASTWITMAMSYIGQ 407
Query: 412 NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIIS 471
NQ K VE +KKA+ + G WKP+ L CL Y +++ D+EG + +K L E ++
Sbjct: 408 NQMSKAVEMLKKAISVSRKG--WKPNPITLTTCLDYLEEQGDVEGIEEIVKSLKSTESLT 465
Query: 472 ADLQDRLL 479
D+ RL+
Sbjct: 466 RDIYHRLV 473
>gi|388517969|gb|AFK47046.1| unknown [Lotus japonicus]
Length = 496
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 176/403 (43%), Positives = 256/403 (63%), Gaps = 3/403 (0%)
Query: 61 GDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPA 120
GDP M P+L+QWVE G + QL+ +I + ++RF+HALQ+S WM+ + N+ L+
Sbjct: 44 GDPRTPMAPILNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVSEWMSNERNYDLSSG 103
Query: 121 DVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRD 180
+A R+ LI+KV G+++A +F +P+ + +Y +LL+ YA KS E+AE IM+++++
Sbjct: 104 LIAKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYASLLSCYAEHKSLEEAEAIMKKIKE 163
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
+ T+ YN ++ +Y Q G Y+KLD LM EM+E + C+ TF+I L+A AA D EG
Sbjct: 164 LRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDL-CNGATFTIRLNAYVAAKDVEG 222
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
++K++ MEAD +DW Y+TAA+GY+KAG +KALA L+KSE + K AY+ +
Sbjct: 223 MEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESL 282
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
+ YAA GNKD+V R+W R K +N YIC++SSLLK D + AEKI EWES +
Sbjct: 283 QSTYAAIGNKDEVYRLWNRIKNLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKN 342
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
D RIPN +I AYC+RGLL KAE I K G + + +W MA GY +N EK V+
Sbjct: 343 FDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQT 402
Query: 421 MKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKL 463
MKKA++ G W+PS L AC+ Y K++ D+E A +KL
Sbjct: 403 MKKAILANRPG--WRPSPSTLVACITYLKEKLDLESALEILKL 443
>gi|15225409|ref|NP_179663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206559|sp|Q9SKU6.1|PP166_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g20710, mitochondrial; Flags: Precursor
gi|4454477|gb|AAD20924.1| hypothetical protein [Arabidopsis thaliana]
gi|51315392|gb|AAT99801.1| At2g20710 [Arabidopsis thaliana]
gi|330251965|gb|AEC07059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 490
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/421 (41%), Positives = 264/421 (62%), Gaps = 2/421 (0%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
L R ++ GDP+ S++ +LD W+++G + +L IIK R + RFSHALQIS WM++
Sbjct: 40 LQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEH 99
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
++ DVAIRLDLIAKV G+ +A +F +P + + +Y ALLN YA K KAE
Sbjct: 100 RVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAE 159
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+ Q+M++ G +K + YN M+N+Y +TG Y ++ L+ EME++ + D +T + L A
Sbjct: 160 QVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAY 219
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
+ SD EG++K + EAD+G+ LDW YA A+GY+KAGL++KAL +LRKSE ++ K
Sbjct: 220 SVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQK 279
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
AY+ +++ Y A G K++V R+W YK+ YN GYI VIS+LLK D +E EKI E
Sbjct: 280 RKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIME 339
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
EWE+ + DIRIP+ LI YC++G++ KAE ++ + + TW +A GY
Sbjct: 340 EWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAG 399
Query: 413 QSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISA 472
+ EK VE K+A+ + + G W+P + L +C+ Y + +RD+EG ++LL+ + IS
Sbjct: 400 KMEKAVEKWKRAIEVSKPG--WRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHISY 457
Query: 473 D 473
D
Sbjct: 458 D 458
>gi|297832672|ref|XP_002884218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330058|gb|EFH60477.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/421 (41%), Positives = 261/421 (61%), Gaps = 2/421 (0%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
L R ++ GDP+ S++ +LD W+++G + +L IIK R + RFSHALQIS WM++
Sbjct: 41 LQRRVARAGDPSASIIRVLDGWLDQGHLVKTSELHGIIKMLRKFSRFSHALQISDWMSEH 100
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
+T DVAIRLDLIAKV G+ +A +F +P + + +Y ALLN YA K KAE
Sbjct: 101 RVHEITEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAE 160
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+ Q+M++ G +K + YN M+N+Y +TG Y ++ L+ EME+ + D +T + L A
Sbjct: 161 QVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDGTVKPDIFTVNTRLHAY 220
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
+A SD EG++K + EAD G+ LDW YA A+GY+KAGL++KA+ +LRKSE ++ K
Sbjct: 221 SAVSDVEGMEKFLMRCEADTGLHLDWRTYADTANGYIKAGLTEKAIEMLRKSEQMVNPRK 280
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
AY+ +++ Y A G K++V R+W YK+ YN GYI VIS+LLK D +E EKI E
Sbjct: 281 RKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIME 340
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
EWE+ + DIRIP+ LI YC++G++ KAE ++ + + TW +A GY
Sbjct: 341 EWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNMLVQKWRVEDTSTWERLALGYKMAG 400
Query: 413 QSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISA 472
+ EK VE K+A+ + + G W+P + L +C+ Y + RD+E ++LL+ + IS
Sbjct: 401 EMEKAVEKWKRAIDVSKPG--WRPHQVVLMSCVDYLEGRRDMESLRKILRLLSERGHISY 458
Query: 473 D 473
D
Sbjct: 459 D 459
>gi|302143279|emb|CBI21840.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 188/444 (42%), Positives = 255/444 (57%), Gaps = 56/444 (12%)
Query: 41 TISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFS 100
T +L + L +SP D S+VP L+QW +EGR + + L +I+K R +KR++
Sbjct: 25 TETLTSNAPKESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYN 84
Query: 101 HALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLN 160
HAL+I W+ K F ++P DVAI+LDLI+KV G+EQA YFN P L+ VY ALLN
Sbjct: 85 HALEIYEWIRDKFYFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLN 144
Query: 161 AYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
Y+ KS EKAE IMQ+MRD G V KT+ YN M+ +Y + G ++KLD+LM EMEE GI
Sbjct: 145 CYSQKKSLEKAEAIMQEMRDMGFV-KTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGL 203
Query: 221 DKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV 280
D +T+ I L+A A SD EG++K++ +E D V DW Y AA+GY+KA L +KA+ +
Sbjct: 204 DSFTYCIRLNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEM 263
Query: 281 LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLK 340
L+ S LLK
Sbjct: 264 LKNS-----------------------------------------------------LLK 270
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
D M+ AEK FEEW S N D R+PN LI AYC++GLL KAE L+ +A +G EP T
Sbjct: 271 LDDMDGAEKTFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVT 330
Query: 401 WYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYF 460
W +A GY +NNQ EK V+ +KKAL+ G WKP+ L+ACL Y K + D+E A+
Sbjct: 331 WDALAAGYHENNQMEKAVDTLKKALLATSQG--WKPNPVTLSACLEYLKGKGDVEEAENL 388
Query: 461 IKLLTGKEIISADLQDRLLNNIRN 484
I+LL + ++SA DRL+N IR+
Sbjct: 389 IRLLREQSLVSAYDSDRLVNYIRS 412
>gi|255553777|ref|XP_002517929.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542911|gb|EEF44447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 446
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 169/412 (41%), Positives = 257/412 (62%), Gaps = 3/412 (0%)
Query: 60 MGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTP 119
+ DP S++P+LDQWV EG + LR ++ + + RF+HALQIS WM + N L+P
Sbjct: 17 LKDPKASVIPVLDQWVNEGNTVRKALLRSLVNLMKGFNRFNHALQISQWMADRPNLTLSP 76
Query: 120 ADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMR 179
+DV +RL+L+ ++ G A YF +P+K K VY ALL+ Y S KAE IM++MR
Sbjct: 77 SDVVVRLELVHRIYGSAHAEKYFEKLPDKFKCREVYCALLSGYVQESSVRKAEAIMEEMR 136
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
+G+ YN ++N+Y + G+Y+K++ L+ EME G+ YT S L++A AAS+
Sbjct: 137 AKGMANSCFPYNLLINLYPKNGDYEKINMLIQEMETNGVVRGAYTMSNLMAAYVAASNIS 196
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
G+++I+ +E D + DW VY+ AASGY+K GL +KAL +LRK E +M K + A+D
Sbjct: 197 GMERILNQIEKDPQLGNDWRVYSVAASGYLKFGLIEKALTMLRKLEDVMPLEKKTSAFDI 256
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
++T Y G +D++ VW YK +++ + +ISSL K D ++ AEKIF EWES+ +
Sbjct: 257 LVTLYGKTGKRDELYLVWNTYKPLIELKETSVMTMISSLSKLDDIKGAEKIFREWESQCM 316
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+D R+ N L+ AYCR+GLL KAE + KA T P +W ++A GY+++NQ K VE
Sbjct: 317 MYDFRVLNTLLFAYCRKGLLKKAEAAVEKAAKDRT-PCASSWGILAMGYIEHNQMYKAVE 375
Query: 420 AMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIIS 471
+KKAL + +G W+P+ L ACL + +K+ D+EG + KLL E ++
Sbjct: 376 MLKKALSI--SGQGWRPNSMTLTACLNFLEKQGDVEGVEEVTKLLKSLEPLN 425
>gi|449438486|ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
gi|449479168|ref|XP_004155524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 500
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/418 (40%), Positives = 259/418 (61%), Gaps = 4/418 (0%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S+VP+L++WV +GR + +L+ ++ + +RF+HAL+IS WMT + L+P+D
Sbjct: 48 PKISVVPVLEKWVGDGRAIGKPELQYLVHLMKDSRRFNHALEISQWMTDRRYLSLSPSDA 107
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A+RLDLI V G+E A +YFN + +LK +VY ALL Y KS EKAE IMQ+MR G
Sbjct: 108 AVRLDLIHSVHGLEHAENYFNSISIRLKTSNVYGALLGCYVREKSLEKAEAIMQEMRKMG 167
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ + YN ++N+Y Q G + K+D L+ EM+ KGI D Y+ L +A A +D G++
Sbjct: 168 IATTSFAYNVLINLYAQIGQHDKIDLLIEEMKTKGIPQDIYSIRNLCAAYVAKADISGME 227
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
KI+ +E D + DWT+Y+ AA+GY+ AGL +AL++L+K+E + N A+ F+++
Sbjct: 228 KILKRIEEDSELKADWTIYSIAANGYLTAGLETEALSMLKKTEEKVRPNTNKFAFKFLLS 287
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
Y G+K++V RVW +K K Y +I+SL K D +E AE+IF+EWES+ +D
Sbjct: 288 LYERTGHKNEVYRVWNTFKPLTKETCVPYALMITSLAKLDDIEGAERIFQEWESKCTVYD 347
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
R+ N L+ AYCR+GLL KAE+++ +A + T P TW ++ATGY + K VE +K
Sbjct: 348 FRVLNRLLVAYCRKGLLDKAESVVNQAVVERT-PFRSTWSILATGYAEYGHMSKAVEMLK 406
Query: 423 KALVLLEAGTRWKPSK-ECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLL 479
KA+++ WKP + + L ACL Y +K+ D E D ++L + ++ RLL
Sbjct: 407 KAILV--GRQNWKPKQGDILEACLDYLEKQGDAETMDEIVRLCKSSGTVMKEMYYRLL 462
>gi|297803972|ref|XP_002869870.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
gi|297315706|gb|EFH46129.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
Length = 480
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/448 (38%), Positives = 274/448 (61%), Gaps = 8/448 (1%)
Query: 41 TISLRKGSSM--YKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKR 98
T+S GSSM + LY+ +SP+GDP S+VP+LD+W EG E+LR +IK+ YKR
Sbjct: 24 TLSRGYGSSMGRFGLYKRISPLGDPKISIVPVLDEWRGEGNYTSKEELRGMIKELIKYKR 83
Query: 99 FSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIAL 158
F HAL++S WM+ + F L+ D R++LI++V G+ +A +F +P+ +K +V+ +L
Sbjct: 84 FVHALEVSRWMSDRMFFPLSLTDFGTRINLISRVCGLGEAEVFFENIPKDMKGIAVFSSL 143
Query: 159 LNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGI 218
L+ YA KSAEKA +++ M++ G+ T YN MMN+YYQ + KLD LM EME+ G+
Sbjct: 144 LSCYAREKSAEKAAKLVEAMKEAGVSMDTRCYNLMMNMYYQMNVHGKLDDLMLEMEQNGV 203
Query: 219 DCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKAL 278
D++T SI LSA AAAS+ EGI+K + + + +DWT+Y+ AA+ ++K L D+A
Sbjct: 204 SFDQFTLSIRLSAYAAASNIEGIEKTIEKISSMSETAIDWTIYSAAANAFLKVELIDEAT 263
Query: 279 AVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSL 338
+L+K E + + + A+ ++ Y G K+D+ RVW R+K+ KV+N GY +ISS
Sbjct: 264 MMLKKCEEFVNEDSGNEAFHTLLKLYGETGRKEDLSRVWLRFKEERKVFNSGYKIMISSA 323
Query: 339 LKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
LKF +E EK+F +WES L +D RIPN LI+ YC + L KAE L+ KA+ P +
Sbjct: 324 LKFGDIELVEKVFNQWESEKLSYDFRIPNLLINFYCEKDLTEKAELLLKKAEGNRVSPPM 383
Query: 399 RTWYLMATGYLQNNQSEKGVEAMKKAL-VLLEAGTRWKPSKECLAACLGYYKKERDIEGA 457
+ +A YL+ ++ K EA+++A+ +E R + +E L +CL + D G
Sbjct: 384 DAYICLANIYLEGDEISKATEAIERAVSTQIETEQRLEAQRELLNSCLACLRGNGD--GR 441
Query: 458 DYFIKL---LTGKEIISADLQDRLLNNI 482
+ F ++ LT + + S +RL +++
Sbjct: 442 ERFGEVMDSLTSENLFSIAALERLSHHL 469
>gi|147766620|emb|CAN73943.1| hypothetical protein VITISV_032243 [Vitis vinifera]
Length = 448
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/433 (38%), Positives = 249/433 (57%), Gaps = 17/433 (3%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY + + DP S+ PLL+QW+EEG+ + QL+ +++ + ++RF HAL+IS WMT +
Sbjct: 24 LYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMTDR 83
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
F LTP+D AIRLDLI+ VP Y ALL+ Y KS EKAE
Sbjct: 84 RYFTLTPSDAAIRLDLIS-------------MVPWTXAGXDAYGALLSGYVREKSVEKAE 130
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
MQ+MR+ + YN ++N+Y QTGN+ K+++L+ EM+ K I CD +T L+ A
Sbjct: 131 ATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQXKAIPCDAFTVXNLMVAY 190
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
AASD ++K + ME D + +DW +Y+ AASGY+K GL DKAL +L+K E H +
Sbjct: 191 VAASDISAMEKXLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPHLE 250
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
A+ +++ YA +K ++ RVW YK + + Y Y C+I+ L K D +E AEKIF+
Sbjct: 251 RXSAFKXLLSLYARTXHKQELYRVWNLYKPSYE-YPEAYSCMITCLTKLDDIEGAEKIFQ 309
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
EWE +D R+ N L+ AYC+R L KAE+L+ K + P TW ++A GY+++
Sbjct: 310 EWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKV-IEERMPYASTWNILAKGYVEDK 368
Query: 413 QSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISA 472
Q K VE +KKA+ + G W+P+ L AC+ Y + + ++E + +L I
Sbjct: 369 QMPKAVEMLKKAISVGRKG--WRPNSIILDACIEYLEGQGNLEEIEEIARLCKNLGIPDG 426
Query: 473 DLQDRLLNNIRNG 485
D+ RLL G
Sbjct: 427 DIHHRLLRTSAAG 439
>gi|255573349|ref|XP_002527601.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533018|gb|EEF34782.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 502
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 157/438 (35%), Positives = 258/438 (58%), Gaps = 5/438 (1%)
Query: 31 TATGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIII 90
TA TR R S+ L+ +SP+G+P+ S+VP+LD WV+EG+ + +L+ II
Sbjct: 17 TANAILTRRYYNKARTASNT--LFARISPLGEPDISLVPVLDNWVQEGKKIRGFELQKII 74
Query: 91 KKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLK 150
+ R ++R++ ALQ+S WM K +PAD A++LDLI +V+G+E A SYF + + +
Sbjct: 75 RDLRCHRRYTQALQVSEWMNGKGQSGFSPADHAVQLDLIGRVRGLESAESYFQNLVNQDR 134
Query: 151 LPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLM 210
Y ALLN Y +K+ MQ+M++ G ++YN +M +Y +TG +K+ ++
Sbjct: 135 NDKTYGALLNCYVREGLVDKSLYHMQKMKELGFASSPLNYNDLMCLYTRTGQLEKVTDVL 194
Query: 211 HEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
EM+E GI D +++ I +S+CAA SD +G+++I+ ME + +DW Y+T AS YVK
Sbjct: 195 SEMKENGITPDLFSYRICMSSCAARSDLKGVEEILEEMENQSHISIDWVTYSTVASIYVK 254
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNR 329
A L +KAL L+K E + N+ + Y+ +I+ A+ G KD+V+R+W K K NR
Sbjct: 255 ASLKEKALIYLKKCEQKV--NRDALGYNHLISLNASLGIKDEVMRLWGLVKTKCKKQVNR 312
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
YI ++ +L+K + +E A+K+ +EWES C+D R+PN L+ YC++GL+ KAE ++
Sbjct: 313 DYITMLGALVKLEELEEADKLLQEWESSCQCYDFRVPNVLLIGYCQQGLIEKAEAMLKDI 372
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYK 449
+ P +W ++A GY+ EK MK+AL + W+P +++ L +
Sbjct: 373 VKKQKNPTPNSWAIIAAGYVNKQNMEKAFNCMKEALTVQAENKGWRPKANLISSILSWLG 432
Query: 450 KERDIEGADYFIKLLTGK 467
+ D+E + F+ LL K
Sbjct: 433 ENGDVEDVEAFVNLLETK 450
>gi|255581582|ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528792|gb|EEF30799.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 300
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 159/302 (52%), Positives = 214/302 (70%), Gaps = 2/302 (0%)
Query: 1 MKLVRLRTTLYNIKAQLGLGNVLDSSSSYSTATGTSTREVTISLRKGSSMYKLYRMLSPM 60
M+L +L T L N +LG N L SS + + T TS+++ R ++ +LYR +SP+
Sbjct: 1 MELTKLSTVL-NTDTRLGSRNELMGSSLFYSTTPTSSQK-WFRERGKDNLNQLYRRISPV 58
Query: 61 GDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPA 120
GDP S+VP+LDQW+EEG+ ++ +QL++ IK+ R KR++HAL+ISMWM+ K F LT
Sbjct: 59 GDPKVSIVPILDQWIEEGKSVNKDQLQVFIKELRYCKRYTHALEISMWMSDKRYFALTSR 118
Query: 121 DVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRD 180
DVAIRLDL++KV GIEQA YF VP+KLK+ VY ALLN YA AKS +KAE +MQ MRD
Sbjct: 119 DVAIRLDLMSKVLGIEQAEKYFENVPQKLKVLEVYNALLNCYAYAKSVDKAEAVMQNMRD 178
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
G KT+ YN M+N++YQTGN+KKL++LM EMEE GI D++T I LSA AA D +
Sbjct: 179 LGFAGKTLTYNVMLNLHYQTGNFKKLEALMLEMEENGIAYDRFTLGIQLSAYAAICDIQR 238
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
++KI++ ME+D VV DW YA A+GY KAGL DKAL +L+KSE L+ K S AY+F+
Sbjct: 239 MEKIMSRMESDANVVTDWCNYAIVANGYRKAGLMDKALEMLKKSEGLITGKKRSSAYNFL 298
Query: 301 IT 302
+T
Sbjct: 299 LT 300
>gi|225461407|ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Vitis vinifera]
Length = 504
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 256/422 (60%), Gaps = 5/422 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY +SP+G PN S+VP+LDQWVEEG+ + +L II+ R KR++ AL++S WM+ K
Sbjct: 39 LYSRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSK 98
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
+P+ A++LDLI +V+G+E A +YFN + + K+ +Y ALLN Y + +K+
Sbjct: 99 ELCPFSPSARAVQLDLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSL 158
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+Q+M++ G + YN +M +Y T +K+ ++ EM+E GI D +++ + +++
Sbjct: 159 SHLQKMKELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSY 218
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
A SD ++KI+ ME+ + +DW Y+ A+ Y+KAGL++KAL L+K+E + +
Sbjct: 219 GARSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYIKAGLNEKALFFLKKAETKLHKDP 278
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIF 351
Y+ +I+ YA+ G+K +++R+W+R K + K+ NR YI ++ SL+K +E E +
Sbjct: 279 L--GYNHLISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALL 336
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
+EWES C+D R+PN L+ +C++GL+ KAE+++ G P +W ++A GY++
Sbjct: 337 KEWESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEK 396
Query: 412 NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIIS 471
EK E MK+A+ +L W+P + +++ L + RD+E + F+ L K +I
Sbjct: 397 QNMEKAFECMKEAIAVLAENKGWRPKPKVISSILSWLGDNRDVEEVETFVSAL--KAVIP 454
Query: 472 AD 473
D
Sbjct: 455 MD 456
>gi|302143027|emb|CBI20322.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 256/422 (60%), Gaps = 5/422 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY +SP+G PN S+VP+LDQWVEEG+ + +L II+ R KR++ AL++S WM+ K
Sbjct: 39 LYSRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSK 98
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
+P+ A++LDLI +V+G+E A +YFN + + K+ +Y ALLN Y + +K+
Sbjct: 99 ELCPFSPSARAVQLDLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSL 158
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+Q+M++ G + YN +M +Y T +K+ ++ EM+E GI D +++ + +++
Sbjct: 159 SHLQKMKELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSY 218
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
A SD ++KI+ ME+ + +DW Y+ A+ Y+KAGL++KAL L+K+E + +
Sbjct: 219 GARSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYIKAGLNEKALFFLKKAETKLHKDP 278
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIF 351
Y+ +I+ YA+ G+K +++R+W+R K + K+ NR YI ++ SL+K +E E +
Sbjct: 279 L--GYNHLISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALL 336
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
+EWES C+D R+PN L+ +C++GL+ KAE+++ G P +W ++A GY++
Sbjct: 337 KEWESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEK 396
Query: 412 NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIIS 471
EK E MK+A+ +L W+P + +++ L + RD+E + F+ L K +I
Sbjct: 397 QNMEKAFECMKEAIAVLAENKGWRPKPKVISSILSWLGDNRDVEEVETFVSAL--KAVIP 454
Query: 472 AD 473
D
Sbjct: 455 MD 456
>gi|224114960|ref|XP_002316903.1| predicted protein [Populus trichocarpa]
gi|222859968|gb|EEE97515.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 160/435 (36%), Positives = 252/435 (57%), Gaps = 4/435 (0%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY +SP+GDP S+ P+LDQWVEEG+ + +LR I+K R KRF AL++S WM+
Sbjct: 2 LYSRISPLGDPRISLAPVLDQWVEEGKKVKDYELRTIVKGLRERKRFKQALEVSQWMSSN 61
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
+P+D A+RLDLI KV G+E A SYF + EK K+ Y ALLN Y EK+
Sbjct: 62 RLCNFSPSDDAVRLDLIGKVHGLESAESYFKNLDEKDKIHKTYGALLNCYVRGGLVEKSL 121
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+Q+M++ G ++YN +M +Y TG +K+ ++ +M+E GI D +++ I L +
Sbjct: 122 SHVQKMKELGFFSTALNYNDLMCLYVNTGLLEKVPDVLSDMKENGISPDLFSYRICLKSY 181
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
SD + ++KI+ ME+ + +DW +AT A+ Y++AGL +KAL L+K E + NK
Sbjct: 182 GERSDFDNVEKILREMESQSHISMDWRTFATVANIYLEAGLKEKALVYLKKCEEKV--NK 239
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIF 351
+ Y+ +I+ YA+ GNKD+++R+W+ K N K NR YI ++ SL+K +E AEK+
Sbjct: 240 NALGYNHLISLYASLGNKDEMMRLWELAKANCKKQLNRDYITILGSLVKLGHLEEAEKLL 299
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
++WES +D R+PN ++ Y R+GL KAE ++ + N +W +++ GY+
Sbjct: 300 QDWESSCQYYDFRVPNVVLIGYSRKGLPEKAEAMLQDIIEKQKMKNPSSWSIISAGYMDK 359
Query: 412 NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIIS 471
EK E MK+AL W+P ++ L + RD + + F+ LL K S
Sbjct: 360 QNMEKAFECMKEALAAETENNGWRPKPAMISNILNWLGDNRDAQEVEAFVGLLETKVPKS 419
Query: 472 ADLQDRLLNN-IRNG 485
++ L+ + IR G
Sbjct: 420 REMYHALIKSYIRCG 434
>gi|356547012|ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20710, mitochondrial-like [Glycine max]
Length = 482
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 175/443 (39%), Positives = 250/443 (56%), Gaps = 12/443 (2%)
Query: 36 STREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRL 95
ST V SL G + GDP S+ P+L+QWVEEGR + QL + +
Sbjct: 16 STESVVASLENG---------VFKNGDPLSSVSPILNQWVEEGREVTKLQLEDLAYRLTQ 66
Query: 96 YKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVY 155
+RF+HALQ+ WM+ + N+ L+P +A +++LI+KV G+EQA YF +P+ +Y
Sbjct: 67 SRRFTHALQVLEWMSNERNYELSPGSIAKQINLISKVHGLEQAERYFRGIPDDKIEFKIY 126
Query: 156 IALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEE 215
ALL YA KS E+AE +M+ +++ V T N M+ +Y + G Y+KLD LM EM+E
Sbjct: 127 AALLRCYAEHKSVEEAEAVMKXIKELHPVNITPCCNMMLELYAKKGKYEKLDRLMQEMKE 186
Query: 216 KGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
K I C+ T++I L+A +D +G++K++ MEAD +DW Y TAA+GY + +
Sbjct: 187 KDI-CNASTYTIRLNAYVVVTDIKGMEKLLMQMEADPVATVDWYTYMTAANGYRRVHNFE 245
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVI 335
K +L+KSE L N A++ + T YA GNKD+V R+W K N YI ++
Sbjct: 246 KVAEMLKKSEHLARGNTRRLAFESIQTMYAIIGNKDEVYRLWNMCTSLKKPNNSSYIRML 305
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
SSL K D ++ AEKI EEWES+ D+RIPN +I AYC+ G KAE I + G +
Sbjct: 306 SSLAKLDEIDGAEKILEEWESKYANFDVRIPNLMISAYCKWGQFDKAEAYIRRLLDGGKQ 365
Query: 396 PNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIE 455
+ RTW +A GY N EK V+AMKKA+ G R P L AC+ Y K++ D++
Sbjct: 366 LDGRTWDRLACGYKAGNDMEKAVQAMKKAVSKNLGGRR--PDPFTLVACVKYLKEKGDLD 423
Query: 456 GADYFIKLLTGKEIISADLQDRL 478
A +KL IS D L
Sbjct: 424 LALEILKLCIENSHISVTSYDGL 446
>gi|356542147|ref|XP_003539532.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Glycine max]
Length = 483
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 169/425 (39%), Positives = 252/425 (59%), Gaps = 4/425 (0%)
Query: 60 MGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTP 119
+GDP + P+L QWVEEGR + QL ++ + +RF+HALQ+ WM+ + N+ L+P
Sbjct: 31 VGDPVIPVSPILKQWVEEGREVTKLQLENLVYRLTQSRRFTHALQVLEWMSNERNYELSP 90
Query: 120 ADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMR 179
++A +++LI+KV+G+EQA YF +P+ +Y ALL YA KS E+AE ++++++
Sbjct: 91 GNIAKQINLISKVRGLEQAEKYFRGIPDAKIEFKIYAALLRCYAEHKSVEEAEAVLKKIK 150
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
+ V T N M+ +Y + G Y+KLD LM EM+EK I C+ T++I L+A A+D +
Sbjct: 151 ELHPVNITACCNMMLELYAKKGKYEKLDRLMQEMKEKDI-CNAGTYTIRLNAYVIATDIK 209
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
G++K++ ME D +DW Y TAA+GY K +K A+L+KSE + AY+
Sbjct: 210 GMEKLLMQMEVDPMATVDWYTYMTAANGYRKVHNFEKVAAMLKKSEHVARGKTKRLAYES 269
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
+ T YA GNKD+V R+W K N+ YI ++SSL+K D ++ AEKI EEWES +
Sbjct: 270 IQTMYAIIGNKDEVHRLWNMCTSPKKP-NKSYIRMLSSLVKLDDIDGAEKILEEWESVHE 328
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
D+RIPN +I AYC+ G KAE I + G + RTW +A GY N E V+
Sbjct: 329 NFDVRIPNLMISAYCKWGQFDKAEAYIRRLLDGGKHLDGRTWDRLACGYNAGNDMENAVQ 388
Query: 420 AMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLL 479
AMKKA+ AG R P L AC+ Y K++ D++ A +KL IS D L+
Sbjct: 389 AMKKAVSTNLAGRR--PDPFTLVACVKYLKEKGDLDLALEILKLCIENSHISVTSYDGLV 446
Query: 480 NNIRN 484
+ +R+
Sbjct: 447 SYVRS 451
>gi|357140786|ref|XP_003571944.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Brachypodium distachyon]
Length = 497
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 159/430 (36%), Positives = 249/430 (57%), Gaps = 5/430 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWV-EEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTK 111
LY ++ + P + P+L+QW E RP++ +L+ IIKK +RFSHAL++SMWMT
Sbjct: 37 LYHRVAAVAIPRLQLTPVLEQWAFAEDRPVEKHELQAIIKKLIRLRRFSHALEMSMWMTD 96
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
+ F L P DVA RL+LI+KV G++ A YF + +++K Y +LL YA AK E+A
Sbjct: 97 RRYFPLKPGDVAYRLELISKVHGLKSAVEYFGGLSKEIKKSQCYGSLLKCYAEAKFVEEA 156
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E +M++ G++ + YN MM +Y++TG +K+ ++ MEE GI D +T ILL+
Sbjct: 157 EKFFGEMQEMGMMS-SYPYNVMMKLYWETGQVEKVRTMYRAMEESGIKPDLFTIDILLTV 215
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
A+ D EGI++++ + +V W YA AS ++KAGL KAL L++SE +
Sbjct: 216 YKASGDLEGIEEVLEKAKPRENLV-GWHSYAIVASAFMKAGLQGKALQALQESEKRIDPK 274
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
AY F+++ A G + +V R+W YK + N Y+C IS+LLK + + AEK F
Sbjct: 275 NGRVAYGFLLSMCADSGMRSEVDRIWDVYKSKVPTCNSMYMCRISALLKMNDTDEAEKAF 334
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
EWESR + HD R+ N L++ YC GL+ KAE L+ +A +G P TWY +A G+ ++
Sbjct: 335 REWESRFVHHDFRLINLLLNGYCAEGLMEKAEALVDEAITKGRMPYANTWYKLAAGFFKD 394
Query: 412 NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIIS 471
Q K V+ +KAL +G W+P + L ++ +++++E A+ LL ++
Sbjct: 395 GQVLKAVDLTRKALASATSG--WEPDLTNVLMSLDHFMEQKNVEAAEEMASLLRSLVPLT 452
Query: 472 ADLQDRLLNN 481
D+ LL
Sbjct: 453 RDVYHSLLKT 462
>gi|147807263|emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
Length = 506
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 151/410 (36%), Positives = 238/410 (58%), Gaps = 2/410 (0%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY +SP+GDPN S+VP LD WV+ G + + +L+ II R KRFS AL+IS WM+KK
Sbjct: 41 LYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMSKK 100
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
+P + A++LDLI +V+G A SYFN + K Y ALLN Y + +K+
Sbjct: 101 GICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSL 160
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+Q+M++ G + YN +M +Y G ++K+ ++ EM++ + D +++ I +++
Sbjct: 161 SHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSHVYPDNFSYRICINSY 220
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
AA SD +G++K++ ME +V+DW YA AA+ Y+KAGL DKA+ L+KSE + +
Sbjct: 221 AAQSDIQGMEKVLKEMERQPHIVMDWNTYAVAANFYIKAGLPDKAIEALKKSEE-RLDKR 279
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKV-YNRGYICVISSLLKFDGMESAEKIF 351
Y+ +I+ YA+ GNK +VLR+W K K NR YI ++ SL++ +E AEK+
Sbjct: 280 DGLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEAEKVL 339
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
EWES C+D R+PN +I Y +GL KAE ++ + +G +W +A+GY+
Sbjct: 340 REWESSGNCYDFRVPNIVIIGYSEKGLFEKAEAMLKELMEKGKITTPDSWGTVASGYMDE 399
Query: 412 NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFI 461
+ EK VE MK A+ L KP+ +A L + + +E + F+
Sbjct: 400 GEMEKAVECMKAAISLHVNNKGRKPNSRVIAGILSWLGDKGRVEDVEAFV 449
>gi|224125490|ref|XP_002329818.1| predicted protein [Populus trichocarpa]
gi|222870880|gb|EEF08011.1| predicted protein [Populus trichocarpa]
Length = 494
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/415 (36%), Positives = 241/415 (58%), Gaps = 7/415 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY LSP+G S+ P LD W++ G+ + + +L+ II FR+ KRF+HALQ+S WM KK
Sbjct: 32 LYSKLSPLGS-TPSLEPELDSWIQNGKKVKVAELQRIIHDFRMRKRFTHALQVSEWMNKK 90
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
+ +P+ A++LDLI +V G A +YFN + ++ K Y ALLN Y + +K+
Sbjct: 91 GICIFSPSQHAVQLDLIGRVHGFVSAENYFNNLRDQDKNEKTYGALLNCYVQKRETDKSI 150
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+Q+M++ G K ++ YN +M +Y G ++K+ +++EM+E + D +++ + +++
Sbjct: 151 SHLQKMKEMGFAKSSLSYNDIMCLYTNVGQHEKVPQVLNEMKENNVSPDNFSYRLCMNSY 210
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
A D EG++K++ ME +V+DW YA AAS Y+K GL+DKA+ L+KSE + K
Sbjct: 211 GARGDLEGMEKMLNEMEHQPDIVVDWNSYAVAASSYIKGGLTDKAIDSLKKSET-RLDKK 269
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIF 351
Y+ +I+ YA G K +VLR+W K + N+ YI +++SL+K D E EK+
Sbjct: 270 DGTGYNHLISLYATLGEKTEVLRLWDLEKSTCERPINKDYINIMASLVKLDEFEEVEKVL 329
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG--TEPNVRTWYLMATGYL 409
+EWE+ +D+R+PN LI Y +GL KA+ L+ +G T PN+ W +A G+
Sbjct: 330 KEWEASGNFYDVRVPNTLIIGYSGKGLYEKAKALLENLTEKGKATLPNI--WGKVAAGFF 387
Query: 410 QNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
N+ K MK AL L E WKP+++ + L + E E A+ F+ L
Sbjct: 388 DKNEVAKAFSCMKAALCLYEENKEWKPNQKVITGILSWLGDEGSAEDAEAFVSSL 442
>gi|148909871|gb|ABR18022.1| unknown [Picea sitchensis]
Length = 561
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/431 (36%), Positives = 255/431 (59%), Gaps = 7/431 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LYR +S +GDP S V L++W+ EGR + LR I+++ R Y R HAL++ WM+KK
Sbjct: 96 LYRRISRLGDPKRSAVEELERWITEGREVKKWVLREIVRELRKYYRHKHALEVFEWMSKK 155
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
F + D A+ L LIAKV GI A Y+ + K Y ALLN Y K+ EK+E
Sbjct: 156 --FPCSVGDRAMHLGLIAKVHGIASAEKYYVDLHHYEKNHLTYFALLNCYVQEKNIEKSE 213
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
IM++++D G +K Y MM +Y T ++K+ ++ EM++KGI D + ++I + +
Sbjct: 214 AIMEELKDLGFIKTAFPYTEMMTLYMNTEQFEKVPLVIQEMKKKGISLDIHCYNIWMRSY 273
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH-- 290
AA SD + + ++ +E D + DW++Y+T A+ Y+ A + DKA + L++ E M
Sbjct: 274 AALSDMDQVAEVFNEIERDDNINTDWSIYSTLANIYINAKVLDKAGSALKEMENKMKEIE 333
Query: 291 -NKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAE 348
K AY+ +I+ + GNKD+V R+W+ ++ K+ NR Y+C++SSL+ +E AE
Sbjct: 334 TKKDQLAYNHLISLHGRLGNKDEVYRIWQSFELAFPKMTNRSYVCLLSSLVGMGDIEGAE 393
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
++WES D RI L++AY +G L KAE L+ + +G +PN +TW +A GY
Sbjct: 394 VFIKKWESMKTFDDSRIYYALLNAYIEKGWLQKAELLLERVVDKGGKPNAKTWETLAEGY 453
Query: 409 LQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKE 468
+QN Q K +EAMK++L +E + W+P + A L +++K+ D++ A+ F K+L G +
Sbjct: 454 IQNEQIHKAMEAMKRSLS-IEGNSPWQPKSVNVLALLKHFEKQGDVKSAEEFFKILRGVK 512
Query: 469 IISADLQDRLL 479
+S ++ + LL
Sbjct: 513 FVSTEIYNSLL 523
>gi|359483464|ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Vitis vinifera]
Length = 506
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 152/412 (36%), Positives = 239/412 (58%), Gaps = 6/412 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY +SP+GDPN S+VP LD WV+ G + + +L+ II R KRFS AL+IS WM+KK
Sbjct: 41 LYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMSKK 100
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
+P + A++LDLI +V+G A SYFN + K Y ALLN Y + +K+
Sbjct: 101 GICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSL 160
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+Q+M++ G + YN +M +Y G ++K+ ++ EM++ + D +++ I +++
Sbjct: 161 SHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRICINSY 220
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
A SD +G++ ++ ME +V+DW YA AA+ Y+KAGL DKA+ L+KSE + +
Sbjct: 221 GAQSDIQGMENVLKEMERQPHIVMDWNTYAVAANFYIKAGLPDKAIEALKKSEE-RLDKR 279
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKV-YNRGYICVISSLLKFDGMESAEKIF 351
Y+ +I+ YA+ GNK +VLR+W K K NR YI ++ SL++ +E AEK+
Sbjct: 280 DGLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEAEKVL 339
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG--TEPNVRTWYLMATGYL 409
EWES C+D R+PN +I Y +GL KAE ++ + +G T PN +W +A+GY+
Sbjct: 340 REWESSGNCYDFRVPNIVIIGYSEKGLFEKAEAMLKELMEKGKITTPN--SWGTVASGYM 397
Query: 410 QNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFI 461
+ EK VE MK A+ L KP+ +A L + + +E + F+
Sbjct: 398 DEGEMEKAVECMKAAISLHVNNKGRKPNSRVIAGILSWLGDKGRVEDVEAFV 449
>gi|42570837|ref|NP_973492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|119935915|gb|ABM06033.1| At2g20710 [Arabidopsis thaliana]
gi|330251966|gb|AEC07060.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 395
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 148/365 (40%), Positives = 227/365 (62%), Gaps = 2/365 (0%)
Query: 109 MTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSA 168
M++ ++ DVAIRLDLIAKV G+ +A +F +P + + +Y ALLN YA K
Sbjct: 1 MSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVL 60
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
KAE + Q+M++ G +K + YN M+N+Y +TG Y ++ L+ EME++ + D +T +
Sbjct: 61 HKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTR 120
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM 288
L A + SD EG++K + EAD+G+ LDW YA A+GY+KAGL++KAL +LRKSE ++
Sbjct: 121 LHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMV 180
Query: 289 MHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAE 348
K AY+ +++ Y A G K++V R+W YK+ YN GYI VIS+LLK D +E E
Sbjct: 181 NAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVE 240
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
KI EEWE+ + DIRIP+ LI YC++G++ KAE ++ + + TW +A GY
Sbjct: 241 KIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGY 300
Query: 409 LQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKE 468
+ EK VE K+A+ + + G W+P + L +C+ Y + +RD+EG ++LL+ +
Sbjct: 301 KMAGKMEKAVEKWKRAIEVSKPG--WRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERG 358
Query: 469 IISAD 473
IS D
Sbjct: 359 HISYD 363
>gi|449431834|ref|XP_004133705.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
gi|449478158|ref|XP_004155237.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
Length = 492
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/431 (34%), Positives = 248/431 (57%), Gaps = 4/431 (0%)
Query: 43 SLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHA 102
S R+ LY +SP+GDP ++VP+L+QW+EEGR + +LR I++ R +R+ A
Sbjct: 38 STRRSCDRRNLYARISPLGDPECTVVPVLNQWIEEGRNIKDFELRRIVRDLRTCRRYRQA 97
Query: 103 LQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAY 162
L++S WM K F LT D AI+LDLI +V+G++ A YF V + ++ +Y ALLN Y
Sbjct: 98 LEVSEWMCSKGLFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSNQKEIGKLYGALLNCY 157
Query: 163 ACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDK 222
+K+ MQ+M++ GL + YN +M +Y TG K+ +++ EM+E G+ D
Sbjct: 158 VREGLIDKSLAHMQKMKEMGLASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDN 217
Query: 223 YTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR 282
+++ I +S+ A SD ++ ++ ME + +DWT Y+ A ++KAG+ DKA+ LR
Sbjct: 218 FSYRICISSYGARSDVISMENVLKEMEGQTHISMDWTTYSMVAGFFIKAGMHDKAMNYLR 277
Query: 283 KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFD 342
K E + + ++ +I+ Y G+K++V+R+W K+ K NR YI ++ SL+K +
Sbjct: 278 KCEDKVDEDAL--GFNHLISHYTNLGHKNEVMRLWALLKKGKKQLNRDYITMLGSLVKLE 335
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
+E AE + EWES C+D R+PN ++ Y ++GL+ KAE ++ + G P+ +W
Sbjct: 336 LLEEAENLVMEWESSCQCYDFRVPNVVLIGYSQKGLIEKAEKMLRNIIVNGMIPSPNSWG 395
Query: 403 LMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIK 462
++A+GYL+ EK E MK+AL + W+P L++ L + + R E F+
Sbjct: 396 IIASGYLEKQNLEKAFECMKEALAVKGQNKVWRPKPNVLSSILRWLSENRRYEEMKEFMS 455
Query: 463 LLTGKEIISAD 473
L K + S D
Sbjct: 456 SL--KTVPSMD 464
>gi|356555227|ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 486
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/435 (34%), Positives = 243/435 (55%), Gaps = 3/435 (0%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY +SP+G+PN S+VP+LD WV +G L + +L+ II+ R RFS ALQIS WM K
Sbjct: 23 LYSKISPLGNPNTSVVPVLDDWVFKGNKLRVAELQRIIRDLRKRSRFSQALQISEWMHNK 82
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
+ +P + A+ LDLI KV G A +YF+ + ++ K Y ALLN Y + +KA
Sbjct: 83 GVCIFSPTEYAVHLDLIGKVHGFSSAETYFDALKDQHKTNKTYGALLNCYVRQRQTDKAL 142
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+Q+M+D G + YN +M +Y G ++K+ ++ EM++ + D +++ I +++
Sbjct: 143 SHLQKMKDLGFASSPLTYNDIMCLYTNIGQHEKVPDVLREMKQNQVLPDNFSYRICINSY 202
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
SD G+++++ ME +V+DW Y+ AA+ Y+KAGL+ A+ LRKSE + NK
Sbjct: 203 GVRSDFGGVERVLKEMETQPNIVMDWNTYSIAANFYIKAGLTRDAVCALRKSEE-RLDNK 261
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGYICVISSLLKFDGMESAEKIF 351
+ Y+ +I+ YA G K++V+R+W K K NR + ++ SL+K ++ AEKI
Sbjct: 262 DGQGYNHLISLYAQLGLKNEVMRIWDLEKNACKRCINRDFTTLLESLVKLGELDEAEKIL 321
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
+EWES + C+D IP+ +I Y ++GL KA ++ + Q + W ++A GY+
Sbjct: 322 KEWESSDNCYDFGIPSIVIIGYSQKGLHEKALAMLEELQNKEKVTTPNCWSIVAGGYIHK 381
Query: 412 NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIIS 471
+ EK + K AL L WKP+ + +A L + +E A+ + LL ++
Sbjct: 382 GEMEKAFKCFKTALSLYVENKGWKPNAKVIAELLRWIGDNGSVEDAEVLVSLLRNAVPVN 441
Query: 472 ADLQDRLLNN-IRNG 485
+ L+ IR G
Sbjct: 442 RQMYHTLIKTYIRGG 456
>gi|224077120|ref|XP_002305141.1| predicted protein [Populus trichocarpa]
gi|222848105|gb|EEE85652.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 155/437 (35%), Positives = 248/437 (56%), Gaps = 8/437 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY +SP+G S+ P LD WV G + + +L+ II R KRFSHALQ+S WM KK
Sbjct: 32 LYSKISPLG-STPSLEPELDSWVRSGNKVRVAELQRIIHDLRKRKRFSHALQVSEWMHKK 90
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
+ +P++ A++LDLI +V G A +YFN + ++ K Y ALLN Y + +K+
Sbjct: 91 DICIFSPSEHAVQLDLIGRVHGFVSAENYFNNLRDQDKNEKTYGALLNCYVRQRETDKSI 150
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+ +Q+M++ G K ++ YN +M +Y G ++K+ +++EM+E + D +++ + +++
Sbjct: 151 LHLQKMKEMGFAKSSLTYNDIMCLYTNVGQHEKVPQVLNEMKENNVLPDNFSYRLCINSF 210
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
A D EG++KI+ ME +V+DW YA AA+ Y+ L+DKA+ L+KSE + K
Sbjct: 211 GARDDLEGMEKILNEMEHQPDIVMDWNTYAVAANFYIIGDLTDKAIDTLKKSEA-RLDKK 269
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY-NRGYICVISSLLKFDGMESAEKIF 351
Y+ +I+ YA GNK +VLR+W K + + N+ YI ++ SLLK E AEK+
Sbjct: 270 DGTGYNHLISLYAKLGNKTEVLRLWDLEKSACERHINKDYIIMMESLLKLSEFEEAEKML 329
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG--TEPNVRTWYLMATGYL 409
+EWES +D+R+PN LI Y R+GL KA+ L+ +G T PN +W ++A G+
Sbjct: 330 KEWESSGNFYDVRVPNTLIIGYSRKGLCEKAKALLENLTEKGKMTLPN--SWGIVAAGFF 387
Query: 410 QNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEI 469
++ K MK AL L WKP++ + L + E E A+ F+ L
Sbjct: 388 DKSEVAKAFSCMKAALCLYVENKGWKPNQRVINGILSWLGDEGSAEDAEAFVSSLKTVIP 447
Query: 470 ISADLQDRLLN-NIRNG 485
++ ++ +L NIR G
Sbjct: 448 VNREMYHAVLKANIRAG 464
>gi|22165052|gb|AAM93669.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432900|gb|AAP54476.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125575303|gb|EAZ16587.1| hypothetical protein OsJ_32059 [Oryza sativa Japonica Group]
Length = 545
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/437 (36%), Positives = 245/437 (56%), Gaps = 9/437 (2%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQW-VEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTK 111
L+R ++ DP + P+L+QW + E RP+ +++ IIK +RFS ALQ+SMWMT+
Sbjct: 83 LFRRVAAAADPRLPLSPVLEQWCLAEERPIAKPEIQSIIKYLCRRRRFSQALQLSMWMTE 142
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
+ + L+P DVA RL+LI KV G+++A YF+ +P++LK Y +LL YA AK EKA
Sbjct: 143 RLHLHLSPGDVAYRLELITKVHGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEAKCVEKA 202
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E + ++MR G+ + YN MM +Y Q G +++ S+ MEE GI D +T L++A
Sbjct: 203 EELFEKMRGMGMA-SSYAYNVMMRLYLQDGQVERVHSMHRTMEESGIVADVFTTDTLVAA 261
Query: 232 CAAASDGEGIDKIVAMMEADR-GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH 290
A D E I+K++ +AD ++ W YAT +++G+ ++AL ++SE +
Sbjct: 262 YVVAEDIEAIEKVLE--KADTCNDLMTWHSYATIGKVLMQSGMEERALQAFQESEKKIAK 319
Query: 291 NKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY--NRGYICVISSLLKFDGMESAE 348
AY F++T YA G +V R+W YK + N Y+C IS LLK + + AE
Sbjct: 320 KSNRVAYGFLLTMYADLGMNSEVDRIWDVYKSKVPASACNSMYMCRISVLLKMNDIVGAE 379
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
K +EEWES+++ HD R+ N L+ AYC+ GL+ KAE L+ + +G P TWY +A GY
Sbjct: 380 KAYEEWESKHVYHDSRLINLLLTAYCKEGLMEKAEALVDQFVKKGRTPFGNTWYKLAGGY 439
Query: 409 LQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKE 468
+ Q+ K + KKAL W P + L Y+ +++++E A+ LL
Sbjct: 440 FKVGQASKAADLTKKALA--SGSNEWTPDLTNVLMSLNYFAEQKNVEAAEEMASLLQRLI 497
Query: 469 IISADLQDRLLNNIRNG 485
+ D+ LL N
Sbjct: 498 TPTRDIYHGLLKTYVNA 514
>gi|125532539|gb|EAY79104.1| hypothetical protein OsI_34210 [Oryza sativa Indica Group]
Length = 513
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 154/429 (35%), Positives = 243/429 (56%), Gaps = 9/429 (2%)
Query: 61 GDPNDSMVPLLDQW-VEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTP 119
DP + P+L+QW + E P+ +L+ ++K R +RFS AL++SMWMT++ + L+P
Sbjct: 59 ADPRIPLAPVLEQWWLAEEHPVSKPELQSLVKYLRRRRRFSQALELSMWMTERRHLHLSP 118
Query: 120 ADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMR 179
DVA RL+LI+KV G+++A YF+ VP +L+ Y +LL Y A+ EKAE + + MR
Sbjct: 119 GDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYTEAERVEKAEELFENMR 178
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
G+ + YN+MMN+Y Q G +++ S+ MEE GI D +T L+SA A D E
Sbjct: 179 GMGMA-NSYAYNAMMNLYSQIGQVERVHSMYKSMEEGGIVPDIFTIDNLVSAYADVEDVE 237
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYD 298
I+K++ +A ++ W +A ++KAG+ ++AL ++SE + K R AY
Sbjct: 238 AIEKVLE--KASCNNLMSWHSFAIVGKVFMKAGMQERALQAFQESEKRITARKDGRVAYG 295
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNLKVY--NRGYICVISSLLKFDGMESAEKIFEEWES 356
F++T YA +V R+W Y+ + N Y+C IS LLK + + AEK +EEWES
Sbjct: 296 FLLTMYADLQMDSEVDRIWDVYRSKVPASACNTMYMCRISVLLKMNDIVGAEKAYEEWES 355
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+++ HD R+ N L+ AYC+ GL+ KAE L+ + +G P TWY +A GY + Q+ K
Sbjct: 356 KHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTPFSNTWYKLAGGYFKVGQASK 415
Query: 417 GVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQD 476
+ KKAL A WKP + + Y+ +++++E A+ LL ++ D+
Sbjct: 416 AADLTKKALA--SASNEWKPDLANVLMSINYFAEQKNVEAAEEMASLLQRLVPLTRDVYH 473
Query: 477 RLLNNIRNG 485
LL N
Sbjct: 474 GLLKTYVNA 482
>gi|255556039|ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541717|gb|EEF43265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 485
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 148/414 (35%), Positives = 234/414 (56%), Gaps = 2/414 (0%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY +SP+GDPN S+VP LD WV++G + + +L+ II+ R RF+ AL++S WM KK
Sbjct: 16 LYSKISPLGDPNTSLVPELDNWVQDGNKVRVGELQRIIRDLRKRNRFTQALEVSEWMNKK 75
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
+ + + A++LDLI KV+G A +YFN + + K Y ALLN Y + +++
Sbjct: 76 GICIFSSTEHAVQLDLIGKVRGFLSAENYFNNLMDHDKTDKTYGALLNCYVRQRQTDRSI 135
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
Q+M++ GL + YN +M +Y G Y+K+ ++ EM+E I D +++ I +++
Sbjct: 136 SHWQKMKEMGLASSPLAYNDIMCLYINLGLYEKVLHVLTEMKENKISPDNFSYRICINSY 195
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
A SD +G++K++ ME G +DW YA A+ Y+KAGL+DKA+ LRKSE + K
Sbjct: 196 GARSDIQGMEKVLNEMECRLGNAMDWNTYAVVANFYIKAGLADKAVDALRKSEE-KLDKK 254
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGYICVISSLLKFDGMESAEKIF 351
Y+ +I+ YA G K +VLR+W K K NR ++ ++ SL+K +E AEK+
Sbjct: 255 DGIGYNHLISLYATLGIKSEVLRIWDLQKSVCKRRINRDFVTMLESLVKLGDLEEAEKVL 314
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
+EWES +D+RIPN ++ Y + GL KAE + +G +W ++A+GYL+
Sbjct: 315 KEWESSGNFYDVRIPNIVVVGYSKNGLHEKAEASLEALMEKGRATTPNSWAMIASGYLEK 374
Query: 412 NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLT 465
+ K E MK A L WKP+ + L + E E + F+ L+
Sbjct: 375 GEKAKAFECMKAAFSLNVEKKGWKPNPRVVMDILIWLGDEGSPEDVEAFVASLS 428
>gi|224121664|ref|XP_002330622.1| predicted protein [Populus trichocarpa]
gi|222872226|gb|EEF09357.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/338 (42%), Positives = 207/338 (61%), Gaps = 5/338 (1%)
Query: 109 MTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSA 168
MT + F T D A+RL LI +V+G+E+A +YFN + KLK Y A+LN KS
Sbjct: 1 MTARRFFTFTTEDAAVRLGLIHRVRGLEEAENYFNKLSVKLKTKYTYGAILNGCVREKSV 60
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
+KAE +MQ+MR+ G+ + YN ++ +Y QTG++ K+ LM EME GI DKYT L
Sbjct: 61 QKAEAVMQEMREGGMTTSSFPYNILIILYSQTGDFDKIPPLMKEMERNGIAEDKYTLRNL 120
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM 288
++A AASD G+++I+ +ME + + LDW +YA AA Y+K G + AL +L K E M
Sbjct: 121 IAASVAASDISGVERILKLMEENPELGLDWKLYAMAADAYLKIGSIETALTMLEKLEKWM 180
Query: 289 MHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAE 348
K ++F+++ YA GNKD++ R+W YK + + + Y C+I SL K D +E AE
Sbjct: 181 AFRKKKAVFNFLLSLYAKTGNKDELYRIWNLYKPSSESMDTSYCCMIDSLTKLDDIEGAE 240
Query: 349 KIFEEWESR-NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
KIFEEWES+ +D R+ N L+ AYC RGL KAE I KA ++G P TW++MA G
Sbjct: 241 KIFEEWESQCTTTYDFRVLNGLLVAYCNRGLFEKAEAAIEKA-VQGRTPYASTWHVMAKG 299
Query: 408 YLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACL 445
Y++++Q K VE +K+A + G WKP + CL
Sbjct: 300 YMEHDQIPKTVEMLKRA---VNVGRDWKPDPILVNTCL 334
>gi|115482784|ref|NP_001064985.1| Os10g0501300 [Oryza sativa Japonica Group]
gi|22165054|gb|AAM93671.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432901|gb|AAP54477.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113639594|dbj|BAF26899.1| Os10g0501300 [Oryza sativa Japonica Group]
Length = 513
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/429 (36%), Positives = 243/429 (56%), Gaps = 9/429 (2%)
Query: 61 GDPNDSMVPLLDQW-VEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTP 119
DP + P+L+QW + E RP+ +L+ ++K R RFS AL++SMWMT++ + L+P
Sbjct: 59 ADPRIPLAPVLEQWWLAEERPVSKPELQSLVKYLRRRCRFSQALELSMWMTERRHLHLSP 118
Query: 120 ADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMR 179
DVA RL+LI+KV G+++A YF+ VP +L+ Y +LL YA A+ EKAE + + MR
Sbjct: 119 GDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYAEAERVEKAEELFENMR 178
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
G+ + YN+MMN+Y Q G +++DS+ MEE GI D +T L+SA A D E
Sbjct: 179 GMGMA-NSYAYNAMMNLYSQIGQVERVDSMYKAMEEGGIVPDIFTIDNLVSAYADVEDVE 237
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYD 298
I+K++ +A ++ W +A ++KAG+ ++AL ++SE + K R AY
Sbjct: 238 AIEKVLE--KASCNNLMSWHSFAIVGKVFMKAGMQERALQAFQESEKRITARKDGRVAYG 295
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNLKVY--NRGYICVISSLLKFDGMESAEKIFEEWES 356
F++T YA +V R+W Y+ + N Y+C IS LLK + + AEK +EEWES
Sbjct: 296 FLLTMYADLQMDSEVDRIWDVYRSKVPASACNTMYMCRISVLLKMNDIVGAEKAYEEWES 355
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+++ HD R+ N L+ AYC+ GL+ KAE L+ + +G TWY +A GY + Q K
Sbjct: 356 KHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTLFSNTWYKLAGGYFKVGQVSK 415
Query: 417 GVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQD 476
+ KKAL A WKP + + Y+ +++++E A+ LL ++ D+
Sbjct: 416 AADLTKKALA--SASNEWKPDLANVLMSINYFAEQKNVEAAEEMASLLQRLVPLTRDVYH 473
Query: 477 RLLNNIRNG 485
LL N
Sbjct: 474 GLLKTYVNA 482
>gi|242039187|ref|XP_002466988.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
gi|241920842|gb|EER93986.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
Length = 510
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 147/413 (35%), Positives = 237/413 (57%), Gaps = 5/413 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LYR + +G P+ + P+L QW +EG + ++ I+KK +RF+HAL++S WMT +
Sbjct: 45 LYRRIMNVGRPSIPLSPVLKQWDQEGHTVKKFVIQAIVKKLVGLRRFAHALELSFWMTDR 104
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
+ LT DVA RLDLI+KV G+E+A YF VP++L++P Y +LL Y AK+ +KAE
Sbjct: 105 RHLHLTAGDVAYRLDLISKVHGLEKAVEYFGMVPKRLRMPQCYGSLLKCYVEAKAVDKAE 164
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+M++ G+ K + Y SMM +Y +TG +++ ++ +MEEKG+ D ++ +L+A
Sbjct: 165 EHFAKMQEMGM-KSSYTYTSMMKLYLETGQLERVHAMFQDMEEKGVKPDTFSVESMLAAY 223
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
AA D EG+ K++ +V W A AAS ++K+G+ +A+ L ++E +
Sbjct: 224 IAAEDVEGVGKVLDKANPHEKLV-KWHGQALAASLFMKSGMQVRAVMALLEAERRISPKS 282
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
AY F++ Y G +V R+W YK + N Y+ IS+LLK + ++ AE +
Sbjct: 283 SRIAYAFLLKTYTDLGMYPEVGRIWSVYKSKVPPSNTMYLSRISALLKMNDIDGAEATLK 342
Query: 353 EWESRNL-CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
EWE+ +L HD R+ N ++DAYCR GL+ KA L+ A +G P TWY +A G+ +
Sbjct: 343 EWETVSLRYHDFRLINLMVDAYCREGLVEKAVALVDDAIKKGRTPYANTWYKLAGGFFKT 402
Query: 412 NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
+ K V+ +KAL A WKP + L ++ ++D+E A+ +L
Sbjct: 403 GEVSKAVDMTRKALE--SATPPWKPDLTNVLMSLEHFMNQKDVEAAEEIASML 453
>gi|356514762|ref|XP_003526072.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 492
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/411 (35%), Positives = 238/411 (57%), Gaps = 6/411 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY +SP+GDP+ S+VP+LD+W+EEG +D L IIK R R + AL++S WM+ K
Sbjct: 34 LYSRISPLGDPSISVVPVLDEWIEEGNAVDGPHLHHIIKILRTRNRNTQALEVSEWMSSK 93
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
++ D A++LDLI +V G+E A Y + + K V+ ALLN Y +K+
Sbjct: 94 G-LPISSRDQAVQLDLIGRVHGVESAERYLQSLSDGDKTWKVHGALLNCYVREGLVDKSL 152
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+MQ+M+D G V ++YN++M++Y QT Y+K+ ++ +M++ G+ + +++ I +++
Sbjct: 153 SLMQKMKDMGFVS-FLNYNNIMSLYTQTQQYEKVPGVLEQMKKDGVPPNIFSYRICINSY 211
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
D ++K++ ME + + +DW Y+ + Y+KA + +KAL L K E H
Sbjct: 212 CVRGDLANVEKLLEEMEREPHIGIDWITYSMVTNFYIKADMREKALVCLMKCEK-KTHRG 270
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGYICVISSLLKFDGMESAEKIF 351
+ AY+ +I+ AA +K ++R WK K N K NR YI ++ L+K ++ AEK+
Sbjct: 271 NTVAYNHLISHNAALRSKGGMMRAWKLQKANCKKQLNREYITMLGCLVKLGELDKAEKVL 330
Query: 352 EEWE-SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
EWE S N C D R+PN L+ YC+RGL+ KAE L+ K G P +W ++A+GY+
Sbjct: 331 GEWELSGNTC-DFRVPNILLIGYCQRGLVEKAEALLRKMVAEGKTPIPNSWSIVASGYVA 389
Query: 411 NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFI 461
EK + MK+A+ + RW+P + +++ + RDIE A+ F+
Sbjct: 390 KENMEKAFQCMKEAVAVHAQNKRWRPKVDVISSIFSWVTNNRDIEEAEDFV 440
>gi|297799892|ref|XP_002867830.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313666|gb|EFH44089.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 226/413 (54%), Gaps = 2/413 (0%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY +SP+GDP S+ P L WV+ G+ + + +L I+ R KRF HAL++S WM +
Sbjct: 27 LYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWMNET 86
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
V +P + A+ LDLI +V G A YF + E+ K Y ALLN Y ++ EK+
Sbjct: 87 GVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNEKTYGALLNCYVRQQNVEKSL 146
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+ Q+M++ G V ++ YN++M +Y G ++K+ ++ EM+E+ + D Y+F I ++A
Sbjct: 147 LHFQKMKEMGFVSSSLTYNNIMCLYTNIGQHEKVPGVLDEMKEENVAPDNYSFRICINAF 206
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
A SD E I I+ ME +DW YA AA Y+ G D+A+ +L+ SE + K
Sbjct: 207 GAMSDLERIGGILRDMERRPDFTMDWNTYAVAAKFYIDGGDCDRAVELLKMSE-YRLEKK 265
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGYICVISSLLKFDGMESAEKIF 351
Y+ +IT YA GNK +VLR+W+ K+ K N+ Y+ V+ SL+K DG++ AE +
Sbjct: 266 DGEGYNHLITLYARLGNKIEVLRLWELEKEACKRRINQDYLTVLQSLMKIDGLKEAEVVL 325
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
EWES C+D R+PN +I Y + + KAE ++ RG +W L+AT Y +
Sbjct: 326 TEWESSGNCYDFRVPNTVIRGYTGKSMEEKAEAMLEDLARRGKTTTPESWGLVATAYAEK 385
Query: 412 NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
+ MK AL + +W+P + + + L + E ++ + F+ L
Sbjct: 386 GALGNAFKCMKTALGIEVENRKWRPGLKLVTSVLSWLGGEGSLKEVESFVASL 438
>gi|356522970|ref|XP_003530115.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 546
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/414 (35%), Positives = 232/414 (56%), Gaps = 3/414 (0%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
+YR +S +P +L+QW EGR L +L ++K+ R YKRF AL++ WM +
Sbjct: 83 VYRRISLNPNPQVGSAEVLNQWENEGRHLTKWELSRVVKELRKYKRFRRALEVYDWMNNR 142
Query: 113 SN-FVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
F ++ +D AI+LDLIAKV+G+ A ++F + +KLK Y ALLN Y ++S EKA
Sbjct: 143 PERFRVSESDAAIQLDLIAKVRGLSSAEAFFLSLEDKLKDKKTYGALLNVYVHSRSKEKA 202
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E + MR +G V + +N MM +Y Y K+D L EM EK I D YT++I LS+
Sbjct: 203 ESLFDTMRSKGYVIHALPFNVMMTLYMNLNEYAKVDILASEMMEKNIQLDIYTYNIWLSS 262
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
C + E ++++ ME D ++ +W+ ++T AS Y++ ++KA LRK E +
Sbjct: 263 CGSQGSVEKMEQVFEQMEKDPSIIPNWSTFSTMASMYIRMDQNEKAEECLRKVEG-RIKG 321
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKI 350
+ + ++++ Y + G KD+V RVW YK + N GY +ISSL+K D +E AEK+
Sbjct: 322 RDRIPFHYLLSLYGSVGKKDEVCRVWNTYKSIFPSIPNLGYHAIISSLVKLDDIEVAEKL 381
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+EEW S +D RI N LI Y ++G KA + + G PN TW +++ G++
Sbjct: 382 YEEWISVKSSYDPRIGNLLIGWYVKKGDTDKALSFFEQMLNDGCIPNSNTWEILSEGHIA 441
Query: 411 NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
+ + + + +K+A + W+P L+A L +++ D+E A+ I LL
Sbjct: 442 DKRISEAMSCLKEAFMAAGGSKSWRPKPSYLSAFLELCQEQDDMESAEVLIGLL 495
>gi|242076656|ref|XP_002448264.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
gi|241939447|gb|EES12592.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
Length = 515
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 144/431 (33%), Positives = 248/431 (57%), Gaps = 5/431 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LYR ++ +G + L W E R LD +L I K+ R ++RF+ ALQ+ WMT++
Sbjct: 82 LYRRIA-VGHGGRPVGRTLGAWDEGERRLDKWELCRIAKELRKFRRFNLALQVYDWMTER 140
Query: 113 SN-FVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
+ F L+ +D+AI+LDLIAKV+G+ A YF+ +P+ +K Y +LLN YA A EK
Sbjct: 141 RDRFSLSSSDMAIQLDLIAKVRGVSHAEKYFDELPDAMKDKRTYGSLLNVYAQAMMKEKT 200
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E +QMR +G T+ N +MN Y +G ++ +++ EM+E+ + D T++I + +
Sbjct: 201 EDTFEQMRKKGFASDTLPCNVLMNFYVDSGEPNEVLAIIDEMKERNVSFDVCTYNIWIKS 260
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
CAA D E ++++ + M AD VV +WT Y T AS Y+K G S+KA L+ +E
Sbjct: 261 CAAKQDAEEMERVFSQMIADESVVANWTTYTTLASMYIKLGNSEKAEECLKDAEKRTT-G 319
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGYICVISSLLKFDGMESAEKI 350
+ + + +++T Y+ G K++V R+W YK ++N GY ++S+L++ +E AE +
Sbjct: 320 REKKCFHYLMTLYSHLGKKEEVYRIWNWYKATFPMIHNLGYQELLSALVRIGDIEGAELL 379
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+EEW S++ D + N L+ Y + GL+ KAE + + +G P TW ++AT Y++
Sbjct: 380 YEEWASKSSSFDPKTMNILLAWYAKEGLITKAEQTLNRFVEKGGNPKPNTWEILATAYMK 439
Query: 411 NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEII 470
+++ + + M+KA +++ +WKP + + L +K++ D EGAD + +LT +
Sbjct: 440 DDKISEALSCMEKATA-IKSANKWKPRPTNVESLLASFKEKNDAEGADRLVSVLTSRGCA 498
Query: 471 SADLQDRLLNN 481
+ L+N
Sbjct: 499 EDEEYKSLINT 509
>gi|293332912|ref|NP_001168310.1| hypothetical protein [Zea mays]
gi|223947377|gb|ACN27772.1| unknown [Zea mays]
gi|414586053|tpg|DAA36624.1| TPA: hypothetical protein ZEAMMB73_688721 [Zea mays]
Length = 513
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 148/436 (33%), Positives = 250/436 (57%), Gaps = 9/436 (2%)
Query: 34 GTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKF 93
GT E LR G+ LYR ++ +G + L W E R LD +L I K+
Sbjct: 65 GTVDYERRSPLRWGT----LYRRIA-VGHGGRPVGRTLGAWDEGERRLDKWELCRIAKEL 119
Query: 94 RLYKRFSHALQISMWMTKKSN-FVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLP 152
R ++RF+ ALQ+ WMT++ + F L+ +D+AI+LDLIAKV+G+ A YF+ +P+ +K
Sbjct: 120 RKFRRFNLALQVYDWMTERRDRFPLSSSDMAIQLDLIAKVRGVPHAEKYFDELPDAMKDK 179
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
Y +LLN YA A EK E +QMR +G T+ N +MN Y +G ++ +++ E
Sbjct: 180 RTYGSLLNVYAQAMMKEKTEETFEQMRKKGFASDTLPCNVLMNFYVDSGEPDEVLAIIDE 239
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M+E+ + D T++I + +CAA D E ++++ + M AD VV +WT Y T AS Y+K G
Sbjct: 240 MKERNVSFDVCTYNIWIKSCAAKQDAEEMEQVFSQMIADESVVANWTTYTTLASMYLKLG 299
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGY 331
S+KA L+ +E + + + +++T Y+ G K++V R+W YK ++N GY
Sbjct: 300 NSEKAEECLKDAEKRTT-GREKKCFHYLMTLYSHLGKKEEVYRIWNWYKATFPMIHNLGY 358
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
++S+L++ +E AE ++EEW S++ D + N L+ Y + GL+ KAE + +
Sbjct: 359 QELLSALIRIGDIEGAELLYEEWASKSYSFDPKTMNILLAWYAKEGLITKAEQTVNRFVE 418
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKE 451
+G P TW ++AT Y+ +++ + + M+KA +++ ++WKP + L +K++
Sbjct: 419 KGGNPKPNTWEILATAYMNDDKISEALSCMEKATA-VKSASKWKPRPTNVETLLASFKEK 477
Query: 452 RDIEGADYFIKLLTGK 467
D EGAD + +LT +
Sbjct: 478 NDAEGADRLVSVLTSR 493
>gi|356503236|ref|XP_003520417.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 555
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 144/414 (34%), Positives = 232/414 (56%), Gaps = 3/414 (0%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
+YR +S +P +L+QW EGR L +L ++K+ R YKRF AL++ WM +
Sbjct: 82 VYRRISLNQNPQVGSAEVLNQWENEGRHLTKWELSRVVKELRKYKRFPRALEVYDWMNNR 141
Query: 113 SN-FVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
F ++ +D AI+LDLIAKV+G+ A ++F + +KLK Y ALLN Y ++S EKA
Sbjct: 142 PERFRVSESDAAIQLDLIAKVRGVSSAEAFFLSLEDKLKDKRTYGALLNVYVHSRSKEKA 201
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E + MR +G V + N MM +Y Y K+D L EM EK I D YT++I LS+
Sbjct: 202 ESLFDTMRSKGYVIHALPINVMMTLYMNLNEYAKVDMLASEMMEKNIQLDIYTYNIWLSS 261
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
C + E ++++ ME D +V +W+ ++T AS Y++ ++KA LRK E +
Sbjct: 262 CGSQGSVEKMEQVFEQMERDPTIVPNWSTFSTLASMYIRMNQNEKAEKCLRKVEG-RIKG 320
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKI 350
+ + ++++ Y + G KD+V RVW YK ++ N GY +ISSL+K D +E AEK+
Sbjct: 321 RDRIPFHYLLSLYGSVGKKDEVYRVWNTYKSIFPRIPNLGYHAIISSLVKLDDIEGAEKL 380
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+EEW S +D RI N L+ Y ++ KA + + G PN TW +++ G++
Sbjct: 381 YEEWISVKSSYDPRIGNLLMGWYVKKDDTDKALSFFEQISNDGCIPNSNTWEILSEGHIA 440
Query: 411 NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
+ + + + +K+A ++ W+P L+A L +++ D+E A+ I LL
Sbjct: 441 DKRISEALSCLKEAFMVAGGSKSWRPKPSYLSAFLELCQEQNDMESAEVLIGLL 494
>gi|357165075|ref|XP_003580262.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Brachypodium distachyon]
Length = 513
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 246/443 (55%), Gaps = 5/443 (1%)
Query: 40 VTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRF 99
V RK LYR ++ +G + L W E R LD +L + ++ R ++RF
Sbjct: 67 VDFERRKALRWSSLYRRIA-VGHGRRPVGRTLADWDEGERRLDKWELCRVARELRKFRRF 125
Query: 100 SHALQISMWMT-KKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIAL 158
+ ALQ+ WMT ++ F L+ +D+AI+LDL+AKV+G+ A YF +P+ LK Y +L
Sbjct: 126 NLALQVYDWMTERRDRFSLSSSDMAIQLDLVAKVRGVPHAEEYFESLPDPLKDKRTYGSL 185
Query: 159 LNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGI 218
LN YA A+ EK E +QMR +G T+ +N +MN Y +K+ ++ EM+E+ +
Sbjct: 186 LNVYAQARMKEKTEDTFEQMRKKGYASDTLPFNVLMNFYVDVEEPQKVSAVTDEMKERNV 245
Query: 219 DCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKAL 278
D T++I + + AA D +G+D++ M AD VV +WT Y T AS ++K G +KA
Sbjct: 246 SFDVCTYNIWIKSFAAMKDADGMDRVFNQMIADESVVANWTTYTTLASMHIKLGNFEKAE 305
Query: 279 AVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGYICVISS 337
L+++E + + + F+IT Y+ K++V R+W YK ++N GY V+S+
Sbjct: 306 VCLKEAEKRTT-GRDKKCFHFLITLYSYLQKKEEVYRIWNWYKATFSTIHNLGYQEVLSA 364
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
L++ +E AE ++EEW S++ D + N L+ Y R G + KAE + + +G P
Sbjct: 365 LVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYSREGFVVKAEQTLNRFVEKGGNPK 424
Query: 398 VRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGA 457
TW ++A+ YL++NQ + + M+KA +++ +RW+P + + L Y+K+ D + A
Sbjct: 425 PNTWEILASAYLKDNQLSEALSCMEKA-AAVKSASRWRPRPSNVESLLAYFKENNDTDSA 483
Query: 458 DYFIKLLTGKEIISADLQDRLLN 480
D + +LT + + L+N
Sbjct: 484 DRLMGVLTSRGCAENEEYKSLIN 506
>gi|224137116|ref|XP_002327026.1| predicted protein [Populus trichocarpa]
gi|222835341|gb|EEE73776.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/404 (34%), Positives = 229/404 (56%), Gaps = 4/404 (0%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWM-TK 111
+YR +S M +P +L++W EG+ L +L ++K+ R YKR+ AL++ WM +
Sbjct: 71 IYRRISLMENPELGSGSVLNRWENEGKRLTKWELCRVVKELRKYKRYQQALEVYDWMKNR 130
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
+ F L+P+D AI+LDLIAKV+G+ A +F +P K VY ALLNAY + EKA
Sbjct: 131 QERFRLSPSDAAIQLDLIAKVRGVSTAEDFFLSLPNTFKDRRVYGALLNAYVQNRMREKA 190
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E + +MRD+G V + +N M +Y Y K+D ++ EM EK I D Y+++I LS+
Sbjct: 191 ETLFDEMRDKGYVTHALPFNVTMTLYMNIKEYDKVDLMISEMNEKNIKLDIYSYNIWLSS 250
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
C + + ++++ M++DR + +WT ++T A+ Y+K G +KA LR+ E +
Sbjct: 251 CGSQGSADKMEQVYEQMKSDRSINPNWTTFSTMATMYIKMGQFEKAEDCLRRVESRIT-G 309
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGYICVISSLLKFDGMESAEKI 350
+ Y ++++ Y GNK++V RVW YK + N GY +ISSL++ D +E AEKI
Sbjct: 310 RDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAIISSLVRLDDIEGAEKI 369
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+EEW S +D RI N I AY +G L +A++ G +PN TW ++A G++
Sbjct: 370 YEEWLSIKTSYDPRIANLFIAAYVYQGNLDEAKSFFDHMLEDGGKPNSNTWEILAQGHIS 429
Query: 411 NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDI 454
++ + + +K+A V WKP+ + + ++E D+
Sbjct: 430 ERRTSEALSCLKEAFV-TPGSKSWKPNPANVTSFFKLCEEEADM 472
>gi|449432307|ref|XP_004133941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
gi|449525818|ref|XP_004169913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
Length = 537
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/414 (34%), Positives = 231/414 (55%), Gaps = 4/414 (0%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMT-K 111
+YR +S M +P +L+QW EG+ + +L ++K+ R YKRF AL+I WM+ +
Sbjct: 72 IYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFERALEIYDWMSNR 131
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
+ F LT +D AI+LDLI+KV+GI+ A YF +P LK +Y ALLNAYA + EKA
Sbjct: 132 EERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLNAYAKGRQREKA 191
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E ++++MR +G + +N MM +Y Y+K++SL+ EM E I D Y+++I LS+
Sbjct: 192 ENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQLDIYSYNIWLSS 251
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
C E ++++ M+ DR + +WT ++T A+ Y+K GL +KA LR+ E ++
Sbjct: 252 CGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEECLRRVESRIV-G 310
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGYICVISSLLKFDGMESAEKI 350
+ Y ++I+ Y + GNK+++ RVW YK + N GY +IS+L++ +E AEKI
Sbjct: 311 RDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIRVGDVEGAEKI 370
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+EEW + +D RI N I Y + G KAE+ G +PN TW ++ + +
Sbjct: 371 YEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSSTWEILVDRHTK 430
Query: 411 NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
+ + + K+A E W+P + A +KE DI + + LL
Sbjct: 431 EGRVSDALASWKEAFS-AEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLVGLL 483
>gi|195613552|gb|ACG28606.1| tetratricopeptide-like helical [Zea mays]
gi|414870858|tpg|DAA49415.1| TPA: tetratricopeptide-like helical [Zea mays]
Length = 517
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/436 (33%), Positives = 242/436 (55%), Gaps = 6/436 (1%)
Query: 52 KLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTK 111
+LYR + +G P+ + P+L+QW +EG ++ I+KK +RF+HAL++S WMT
Sbjct: 41 ELYRRIMNVGRPSIPLSPVLEQWNQEGHTAKKFVIQAIVKKLVGLRRFAHALELSFWMTD 100
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
+ + L+ DVA RLDLI+KV G+E+A YF VP++L+ P Y +LL Y AK+ +KA
Sbjct: 101 RRHLHLSVGDVAYRLDLISKVHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYVEAKAVDKA 160
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E +M++ G+ + Y MM +Y QTG +++ ++ +MEEKG+ D ++ +L+A
Sbjct: 161 EEHFAKMQEMGMT-SSYAYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTFSVEAMLAA 219
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
AA D +G+ K++ +V W +A+AAS ++K+G+ A+ L ++E +
Sbjct: 220 YIAAEDVQGVGKVLDKANPHEKLV-TWHGHASAASLFMKSGMQVGAVMALVEAERRISPK 278
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
AY F++ Y G + R+W YK + N Y+ +S+LL+ + ++ AE
Sbjct: 279 SSRIAYAFLLKTYTELGMHAEAGRIWSVYKSKVPPCNTMYMSRLSALLRTNDIDGAEATL 338
Query: 352 EEWESRNL-CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+EWE+ L HD R+ N ++DAYCR GL+ KA L+ A +G P TWY +A G+ +
Sbjct: 339 KEWETVPLRYHDFRLINVMVDAYCREGLVEKAVALVDGAIKKGRTPYANTWYKLAGGFFK 398
Query: 411 NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEII 470
Q + V+ +KAL A W+P + L ++ ++D+ A+ + L +
Sbjct: 399 TGQVPEAVDMTRKALD--SATPPWRPDLANVLMSLNHFVDQKDVGAAEEMVSTLQKLVPL 456
Query: 471 SADLQDRLLNN-IRNG 485
+ D+ LL +R G
Sbjct: 457 TRDVYHCLLKTYVRAG 472
>gi|449438490|ref|XP_004137021.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 334
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 195/310 (62%), Gaps = 2/310 (0%)
Query: 175 MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAA 234
MQ+MR+ G +K + YN+M+N+Y G ++KL L+ EMEE GI D++T++I ++A AA
Sbjct: 1 MQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRMNAYAA 60
Query: 235 ASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
ASD ++K+++ MEAD V DW Y +GY KAGLS+ ++ +L+K+E + +
Sbjct: 61 ASDITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGLSENSILMLKKAEQFIGDKQKW 120
Query: 295 RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
AY +++T YAA GNKD+V RVW Y K +N GY+C+ISSL+K D ++ AE+I +EW
Sbjct: 121 LAYQYLMTLYAAIGNKDEVYRVWNLYTNLQKRFNSGYLCIISSLMKLDDIDGAERILKEW 180
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
ES + D RIPN +I++YC +G + KAE I + G EP TW L+A+GY N +
Sbjct: 181 ESGDTSFDFRIPNMMINSYCTKGFVDKAEAYINRLIETGKEPEANTWDLLASGYHSNGLT 240
Query: 415 EKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADL 474
K E +KKA+ + + WKP LAACL Y K +++ A+ I LL ++I ++
Sbjct: 241 NKVAETLKKAISV--SPPHWKPKYHILAACLEYLKTNENVDLAEEIIGLLCKRDIFPLNI 298
Query: 475 QDRLLNNIRN 484
RL + IR+
Sbjct: 299 CKRLEDYIRS 308
>gi|326505170|dbj|BAK02972.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 151/475 (31%), Positives = 267/475 (56%), Gaps = 22/475 (4%)
Query: 13 IKAQLGLGNVLDSSSSYSTATGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLD 72
+ A G +L +S+ ++ G +IS+ G ++ K R+L + P S V +L
Sbjct: 6 LAAATGYARLLSASAPAASTGGAGG---SISVGGGDTLGK--RLLK-LIYPKRSAVVVLR 59
Query: 73 QWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKV 132
+W EEGR + QL ++++ R Y+RF HAL+I WM + L P D A+ LDL+AKV
Sbjct: 60 RWAEEGRAVHKYQLNRVVRELRKYRRFKHALEICEWMRTQPEIRLLPGDHAVHLDLVAKV 119
Query: 133 QGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+G+ A +F VPE+ K PS +LL+AY + +KAE ++++M D G + + +N
Sbjct: 120 RGLASAEKFFEDVPERAKGPSTCNSLLHAYVQHGARDKAEAMLKEMADAGYLTCALPFNH 179
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
MM++Y G +K+ ++ E+ I D T++I L+ C+ + + +K+ +M+ DR
Sbjct: 180 MMSLYMSVGELEKVPEMIKELRRYTIP-DLVTYNIWLTYCSRKNSVKSAEKVFDLMKDDR 238
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYDFVITQYAACG 308
VV DW ++ AS Y+ AGL K + ++ M + SR AY ++T YA+
Sbjct: 239 -VVPDWMTFSLLASIYINAGLHVKG-----RDALVEMEKRASRKERAAYSSLLTMYASLS 292
Query: 309 NKDDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
++ ++ RVW + +Q + ++ Y C+++SL +F + +AE ++ EWES++ D RIPN
Sbjct: 293 DRGNLDRVWSKMRQTFRKFSDAEYKCMLTSLTRFGDIAAAEFVYGEWESQSGTKDSRIPN 352
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ-SEKGVEAMKKALV 426
++ Y + G + KAE+ + +G +P+ TW L GYL N++ ++K +E +KKAL
Sbjct: 353 TILSFYIKNGEMEKAESFLQYIVQKGVKPSYSTWELFVWGYLGNDERTDKVMECLKKALS 412
Query: 427 LLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLLNN 481
LE +W+P+ + +AA +K+ DIE A+ + +L G ++ ++ + +L
Sbjct: 413 SLE---KWEPNPQLVAALFSQIEKKGDIEAAEELLVVLRGAGYVTTEIYNLVLRT 464
>gi|22328859|ref|NP_680735.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75146702|sp|Q84JR3.1|PP334_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g21705, mitochondrial; Flags: Precursor
gi|28393142|gb|AAO42004.1| unknown protein [Arabidopsis thaliana]
gi|28827500|gb|AAO50594.1| unknown protein [Arabidopsis thaliana]
gi|332659092|gb|AEE84492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 492
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 136/413 (32%), Positives = 222/413 (53%), Gaps = 2/413 (0%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY +SP+GDP S+ P L WV+ G+ + + +L I+ R KRF HAL++S WM +
Sbjct: 27 LYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWMNET 86
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
V +P + A+ LDLI +V G A YF + E+ K Y ALLN Y ++ EK+
Sbjct: 87 GVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKSL 146
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+ ++M++ G V ++ YN++M +Y G ++K+ ++ EM+E+ + D Y++ I ++A
Sbjct: 147 LHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAF 206
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
A D E I + ME + + +DW YA AA Y+ G D+A+ +L+ SE + K
Sbjct: 207 GAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSEN-RLEKK 265
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGYICVISSLLKFDGMESAEKIF 351
Y+ +IT YA G K +VLR+W K K N+ Y+ V+ SL+K D + AE++
Sbjct: 266 DGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVL 325
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
EW+S C+D R+PN +I Y + + KAE ++ RG +W L+AT Y +
Sbjct: 326 TEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEK 385
Query: 412 NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
E + MK AL + +W+P + + L + E ++ + F+ L
Sbjct: 386 GTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASL 438
>gi|326493098|dbj|BAJ85010.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510377|dbj|BAJ87405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/436 (33%), Positives = 244/436 (55%), Gaps = 9/436 (2%)
Query: 34 GTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKF 93
GT E +LR S LYR ++ +G + L W E R LD +L I ++
Sbjct: 55 GTVDFERRPALRWSS----LYRRVA-VGHGGRPVGRTLADWDEGERRLDKWELCRIAREL 109
Query: 94 RLYKRFSHALQISMWMT-KKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLP 152
R ++RF+ AL++ WMT ++ F L+ +D+AI+LDLIAKV+G+ A YF +P+ LK
Sbjct: 110 RKFRRFNLALEVYDWMTDRRDRFSLSSSDMAIQLDLIAKVRGVPDAEEYFEKLPDPLKDK 169
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
Y +LLN YA A+ EK E +QMR +G T+ +N +MN Y +K+ ++ E
Sbjct: 170 RTYGSLLNVYAQARMKEKTEYTFEQMRKKGFATDTLPFNVLMNFYVDVAEPEKVSTVTDE 229
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M+++ I D T++I + CAA D + +++++ M AD VV +WT Y T AS ++K
Sbjct: 230 MKQRNISFDVCTYNIWIKCCAAMKDADAMERVLNQMTADESVVANWTTYTTLASMHIKLE 289
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGY 331
+KA L+++E + + + F+IT Y+ K++V R+W YK K ++N GY
Sbjct: 290 NFEKAEECLKEAEKRAT-GRDKKCFHFLITLYSHLQKKEEVYRIWNWYKATFKTIHNLGY 348
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
V+S+L++ +E AE ++EEW S++ D + N L+ Y R G + KA+ + +
Sbjct: 349 QEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYSREGFVVKAQQTLNRFVE 408
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKE 451
+G P TW ++AT YL++NQ + + ++KA +++ ++W+P + L Y+K++
Sbjct: 409 KGGNPKPNTWEILATAYLKDNQLSEALSCLEKATA-VKSASKWRPRPTNVETLLAYFKEK 467
Query: 452 RDIEGADYFIKLLTGK 467
D E D + +L +
Sbjct: 468 NDTESVDRLMSVLRSR 483
>gi|326498623|dbj|BAK02297.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 143/436 (32%), Positives = 243/436 (55%), Gaps = 9/436 (2%)
Query: 34 GTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKF 93
GT E +LR S LYR ++ +G + L W E R LD +L I ++
Sbjct: 55 GTVDFERRPALRWSS----LYRRVA-VGHGGRPVGRTLADWDEGERRLDKWELCRIAREL 109
Query: 94 RLYKRFSHALQISMWMT-KKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLP 152
R ++RF+ AL++ WMT ++ F L+ +D+AI+LDLIAKV+G+ YF +P+ LK
Sbjct: 110 RKFRRFNLALEVYDWMTDRRDRFSLSSSDMAIQLDLIAKVRGVPDTEEYFEKLPDPLKDK 169
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
Y +LLN YA A+ EK E +QMR +G T+ +N +MN Y +K+ ++ E
Sbjct: 170 RTYGSLLNVYAQARMKEKTEYTFEQMRKKGFATDTLPFNVLMNFYVDVAEPEKVSTVTDE 229
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M+++ I D T++I + CAA D + +++++ M AD VV +WT Y T AS ++K
Sbjct: 230 MKQRNISFDVCTYNIWIKCCAAMKDADAMERVLNQMTADESVVANWTTYTTLASMHIKLE 289
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGY 331
+KA L+++E + + + F+IT Y+ K++V R+W YK K ++N GY
Sbjct: 290 NFEKAEECLKEAEKRAT-GRDKKCFHFLITLYSHLQKKEEVYRIWNWYKATFKTIHNLGY 348
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
V+S+L++ +E AE ++EEW S++ D + N L+ Y R G + KA+ + +
Sbjct: 349 QEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYSREGFVVKAQQTLNRFVE 408
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKE 451
+G P TW ++AT YL++NQ + + ++KA +++ ++W+P + L Y+K++
Sbjct: 409 KGGNPKPNTWEILATAYLKDNQLSEALSCLEKATA-VKSASKWRPRPTNVETLLAYFKEK 467
Query: 452 RDIEGADYFIKLLTGK 467
D E D + +L +
Sbjct: 468 NDTESVDRLMSVLRSR 483
>gi|22329290|ref|NP_171717.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806400|sp|Q8LPS6.2|PPR3_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g02150
gi|2317908|gb|AAC24372.1| Unknown protein [Arabidopsis thaliana]
gi|332189272|gb|AEE27393.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 524
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 144/428 (33%), Positives = 238/428 (55%), Gaps = 10/428 (2%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
+Y+ +S M P +L+QW + GR L +L ++K+ R YKR + AL++ WM +
Sbjct: 69 IYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNR 128
Query: 113 SN-FVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
F L+ +D AI+LDLI KV+GI A +F +PE K VY +LLNAY AKS EKA
Sbjct: 129 GERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKA 188
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E ++ MRD+G + +N MM +Y Y K+D+++ EM++K I D Y+++I LS+
Sbjct: 189 EALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSS 248
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV-LMMH 290
C + E ++ + M++D + +WT ++T A+ Y+K G ++KA LRK E +
Sbjct: 249 CGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGR 308
Query: 291 NKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEK 349
N+ Y ++++ Y + GNK ++ RVW YK + + N GY ++SSL++ +E AEK
Sbjct: 309 NRI--PYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEK 366
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
++EEW +D RIPN L++AY + L AE L G +P+ TW ++A G+
Sbjct: 367 VYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHT 426
Query: 410 QNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEI 469
+ + + ++ A E + W+P L+ ++E D+ + ++LL
Sbjct: 427 RKRCISEALTCLRNAFS-AEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQ--- 482
Query: 470 ISADLQDR 477
S DL+D+
Sbjct: 483 -SGDLEDK 489
>gi|115473169|ref|NP_001060183.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|34393591|dbj|BAC83218.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113611719|dbj|BAF22097.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|215706491|dbj|BAG93347.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 233/436 (53%), Gaps = 3/436 (0%)
Query: 45 RKGSSMYKLYRMLSPMGDPNDSMVPLLDQWV-EEGRPLDMEQLRIIIKKFRLYKRFSHAL 103
RK + L L P+G P +VP +++W + G L +L I+K+ R +R AL
Sbjct: 57 RKPARPPSLQSTLWPLGHPGTLLVPEIERWAAKPGNRLRHVELERIVKELRKRRRHRQAL 116
Query: 104 QISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYA 163
++S WM K + P D A+ LDLI ++ G A +YFN +P+K K Y ALLN Y
Sbjct: 117 EVSEWMNAKGHVKFLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYT 176
Query: 164 CAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKY 223
EK+ Q+M++ G V T+ YN++M +Y G ++K+ S++ EM+ GI D +
Sbjct: 177 RELLVEKSLAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNF 236
Query: 224 TFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
++ I +++ +D G++ + ME + +V+DW YA AS Y+K + +KA + L+K
Sbjct: 237 SYRICINSYGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKK 296
Query: 284 SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY-NRGYICVISSLLKFD 342
+E ++ K S +Y+ +I+ Y G+K +V R+W N + N+ Y +++ L+K +
Sbjct: 297 AEA-KINIKDSDSYNHLISLYGHLGDKSEVNRLWALQMSNCNRHINKDYTTMLAVLVKLN 355
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
+E AE + +EWES D ++PN L+ Y ++ LL KAE L+ +G P +W
Sbjct: 356 EIEEAEVLLKEWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTSWA 415
Query: 403 LMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIK 462
++A GY + + K E K AL + T W P + L Y E D+E + F+
Sbjct: 416 IVAAGYAEKGDAAKAYELTKNALCVYAPNTGWIPRPGMIEMILKYLGDEGDVEEVEIFVD 475
Query: 463 LLTGKEIISADLQDRL 478
LL +++D+ D L
Sbjct: 476 LLKVAVPLNSDMTDAL 491
>gi|225453344|ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150
[Vitis vinifera]
Length = 527
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 146/414 (35%), Positives = 230/414 (55%), Gaps = 7/414 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
+YR +S M +P +L+QW EG+ L +L ++K+ R +KRF AL++ WM +
Sbjct: 60 VYRRISLMENPEMGSASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALEVYEWMNNR 119
Query: 113 SN-FVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
F L+ +D AI+LDLIAKV G+ A YF+ +P+ LK +Y ALLNAY AK +KA
Sbjct: 120 GERFRLSSSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKA 179
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
EI+++++R++G + +N MM +Y K+ S++ EM K I D Y+++I LS+
Sbjct: 180 EILIEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSS 239
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
C + E ++++ M+ +R + +WT ++T A+ Y+K G +KA L+K E + N
Sbjct: 240 CEST---ERMEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVES-RITN 295
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKI 350
+ Y ++I+ Y + GNK +V R W YK + N GY +ISSL++ +E AEKI
Sbjct: 296 RDRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKI 355
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+EEW S +D RI N L+ Y + G L KAE + G +PN TW ++A G
Sbjct: 356 YEEWLSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAEGNTG 415
Query: 411 NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
+ + K+A VL E WKP ++A L ++E D + + LL
Sbjct: 416 VKKISDALSCFKRA-VLAEGSNGWKPKPVNVSAFLDLCEEEADTATKEALMGLL 468
>gi|20453085|gb|AAM19786.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
gi|29028736|gb|AAO64747.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
Length = 524
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 143/428 (33%), Positives = 238/428 (55%), Gaps = 10/428 (2%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
+Y+ +S M P +L+QW + GR L +L ++K+ R YKR + A+++ WM +
Sbjct: 69 IYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQAIEVYDWMNNR 128
Query: 113 SN-FVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
F L+ +D AI+LDLI KV+GI A +F +PE K VY +LLNAY AKS EKA
Sbjct: 129 GERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKA 188
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E ++ MRD+G + +N MM +Y Y K+D+++ EM++K I D Y+++I LS+
Sbjct: 189 EALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSS 248
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV-LMMH 290
C + E ++ + M++D + +WT ++T A+ Y+K G ++KA LRK E +
Sbjct: 249 CGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGR 308
Query: 291 NKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEK 349
N+ Y ++++ Y + GNK ++ RVW YK + + N GY ++SSL++ +E AEK
Sbjct: 309 NRI--PYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEK 366
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
++EEW +D RIPN L++AY + L AE L G +P+ TW ++A G+
Sbjct: 367 VYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHT 426
Query: 410 QNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEI 469
+ + + ++ A E + W+P L+ ++E D+ + ++LL
Sbjct: 427 RKRCISEALTCLRNAFS-AEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQ--- 482
Query: 470 ISADLQDR 477
S DL+D+
Sbjct: 483 -SGDLEDK 489
>gi|32488964|emb|CAE04345.1| OSJNBb0038F03.9 [Oryza sativa Japonica Group]
Length = 511
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 142/430 (33%), Positives = 240/430 (55%), Gaps = 5/430 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LYR ++ +G + L W E R LD +L I ++ R ++RF+ ALQ+ WMT++
Sbjct: 78 LYRRIA-VGHGGRPVGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMTER 136
Query: 113 SN-FVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
+ F L+ +D+AI+LDLIAKV+G+ A YF +P+ LK Y +LLN YA A EK
Sbjct: 137 RDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKT 196
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E +QMR +G T+ +N +MN Y +K+ L+ EM E+ + D T++I + +
Sbjct: 197 ESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIKS 256
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
CAA D + ++++ M D VV +WT Y T AS ++K G S+KA L+++E
Sbjct: 257 CAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTT-G 315
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGYICVISSLLKFDGMESAEKI 350
+ + + +++T Y+ G K++V RVW YK ++N GY V+S+L++ +E AE +
Sbjct: 316 REKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELL 375
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+EEW S++ D + N L+ Y R G + KAE + + +G P TW ++ T YL+
Sbjct: 376 YEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAYLK 435
Query: 411 NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEII 470
+ QS + + ++KA + + ++W+P + + L +K++ D E AD + +L +
Sbjct: 436 DGQSSEALSCLEKATAVA-SPSKWRPRPTNVESLLANFKEKNDAESADRLMNVLRSRRCE 494
Query: 471 SADLQDRLLN 480
+ L+N
Sbjct: 495 ENEEYKSLIN 504
>gi|125549215|gb|EAY95037.1| hypothetical protein OsI_16851 [Oryza sativa Indica Group]
Length = 511
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 142/430 (33%), Positives = 240/430 (55%), Gaps = 5/430 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LYR ++ +G + L W E R LD +L I ++ R ++RF+ ALQ+ WMT++
Sbjct: 78 LYRRIA-VGHGGRPVGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMTER 136
Query: 113 SN-FVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
+ F L+ +D+AI+LDLIAKV+G+ A YF +P+ LK Y +LLN YA A EK
Sbjct: 137 RDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKT 196
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E +QMR +G T+ +N +MN Y +K+ L+ EM E+ + D T++I + +
Sbjct: 197 ESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIKS 256
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
CAA D + ++++ M D VV +WT Y T AS ++K G S+KA L+++E
Sbjct: 257 CAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTT-G 315
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGYICVISSLLKFDGMESAEKI 350
+ + + +++T Y+ G K++V RVW YK ++N GY V+S+L++ +E AE +
Sbjct: 316 REKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELL 375
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+EEW S++ D + N L+ Y R G + KAE + + +G P TW ++ T YL+
Sbjct: 376 YEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAYLK 435
Query: 411 NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEII 470
+ QS + + ++KA + + ++W+P + + L +K++ D E AD + +L +
Sbjct: 436 DGQSSEALSCLEKATAVA-SPSKWRPRPTNVESLLANFKEKNDAESADRLMNVLRSRRCE 494
Query: 471 SADLQDRLLN 480
+ L+N
Sbjct: 495 ENEEYKSLIN 504
>gi|297603118|ref|NP_001053460.2| Os04g0544400 [Oryza sativa Japonica Group]
gi|255675659|dbj|BAF15374.2| Os04g0544400 [Oryza sativa Japonica Group]
Length = 571
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 235/417 (56%), Gaps = 5/417 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMT-K 111
LYR ++ +G + L W E R LD +L I ++ R ++RF+ ALQ+ WMT +
Sbjct: 78 LYRRIA-VGHGGRPVGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMTER 136
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
+ F L+ +D+AI+LDLIAKV+G+ A YF +P+ LK Y +LLN YA A EK
Sbjct: 137 RDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKT 196
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E +QMR +G T+ +N +MN Y +K+ L+ EM E+ + D T++I + +
Sbjct: 197 ESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIKS 256
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
CAA D + ++++ M D VV +WT Y T AS ++K G S+KA L+++E
Sbjct: 257 CAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTT-G 315
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGYICVISSLLKFDGMESAEKI 350
+ + + +++T Y+ G K++V RVW YK ++N GY V+S+L++ +E AE +
Sbjct: 316 REKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELL 375
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+EEW S++ D + N L+ Y R G + KAE + + +G P TW ++ T YL+
Sbjct: 376 YEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAYLK 435
Query: 411 NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGK 467
+ QS + + ++KA + + ++W+P + + L +K++ D E AD + +L +
Sbjct: 436 DGQSSEALSCLEKATAVA-SPSKWRPRPTNVESLLANFKEKNDAESADRLMNVLRSR 491
>gi|224063635|ref|XP_002301239.1| predicted protein [Populus trichocarpa]
gi|222842965|gb|EEE80512.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/414 (33%), Positives = 229/414 (55%), Gaps = 4/414 (0%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMT-K 111
+YR +S M +P +L+QW +G+ L +L ++K+ R YKR+ AL++ WM +
Sbjct: 71 IYRRISLMENPELGSGSVLNQWENDGKRLTKWELCRVVKELRKYKRYQQALEVYDWMNNR 130
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
+ F L+P+D AI+LDLIAKV+G+ A +F +P K +Y ALLNAY + EKA
Sbjct: 131 QERFGLSPSDAAIQLDLIAKVRGVSSAEDFFLRLPNTFKDRRIYGALLNAYVRNRMREKA 190
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E ++ +MR + V + YN MM +Y Y K+D ++ EM EK I D Y+++I LS+
Sbjct: 191 ESLIDEMRGKDYVTHALPYNVMMTLYMNINEYDKVDLIISEMNEKNIKLDIYSYNIWLSS 250
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
C + ++++ M++D + +WT ++T A+ Y+K G +KA LR+ E +
Sbjct: 251 CGLQGSADKMEQVFEQMKSDGSINPNWTTFSTMATMYIKMGKFEKAEDCLRRVESRIT-G 309
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGYICVISSLLKFDGMESAEKI 350
+ Y ++++ Y GNK++V RVW YK + N GY +ISSL++ D +E AEKI
Sbjct: 310 RDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAMISSLVRMDDIEGAEKI 369
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+EEW S +D RI N + A+ +G L KAE+ G +PN +W ++A G++
Sbjct: 370 YEEWLSIKTSYDPRIANLFMAAFVYQGNLDKAESFFDHMLEEGGKPNSHSWEILAQGHIS 429
Query: 411 NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
++ + + +K+A WKP+ +++ ++E D+ + L
Sbjct: 430 ERRTSEALSCLKEAFA-TPGSKSWKPNPANVSSFFKLCEEEVDMASKEALASFL 482
>gi|297848282|ref|XP_002892022.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337864|gb|EFH68281.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 523
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/415 (33%), Positives = 232/415 (55%), Gaps = 6/415 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
+Y+ +S M P +L+QW + GR L +L ++K+ R YKR + AL++ WM +
Sbjct: 68 IYKKISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNNR 127
Query: 113 SN-FVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
F L+ +D AI+LDLI KV+GI A +F +PE K VY +LLNAY AKS EKA
Sbjct: 128 GERFRLSASDAAIQLDLIGKVRGISDAEQFFLTLPENFKDRRVYGSLLNAYVRAKSREKA 187
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E ++ MRD+G + +N MM +Y Y K+D+++ EM++K I D Y+++I LS+
Sbjct: 188 EALLHTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSS 247
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV-LMMH 290
C + E ++ + M++D + +WT ++T A+ Y+K G ++KA LRK E +
Sbjct: 248 CGSLGSVEKMELVYQQMKSDVSINPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGR 307
Query: 291 NKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGYICVISSLLKFDGMESAEK 349
N+ Y ++++ Y + GNK ++ RVW YK + + N GY ++SSL + +E AEK
Sbjct: 308 NRI--PYHYLLSLYGSVGNKKELYRVWNVYKSVVPSIPNLGYHALVSSLARMGDIEGAEK 365
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
++EEW +D RIPN L++ Y + L KAE L G +P+ TW ++A G+
Sbjct: 366 VYEEWLPVKSSYDPRIPNLLMNVYVKNDQLEKAEGLFDHMVEMGGKPSSSTWEILADGHT 425
Query: 410 QNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
+ + + ++KA E + W+P L+ ++E D+ + ++LL
Sbjct: 426 RKRCIPEALTCLRKAFS-AEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELL 479
>gi|242083618|ref|XP_002442234.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
gi|241942927|gb|EES16072.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
Length = 501
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/420 (32%), Positives = 237/420 (56%), Gaps = 7/420 (1%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S V +L +W EEGR ++ QL ++++ R Y RF HAL+I WM + L P D
Sbjct: 42 PKRSAVVVLRRWAEEGRTVEKYQLNRVVRELRKYGRFKHALEICEWMRTRPEMRLLPGDH 101
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A+ LDL+AKV+G+ A +F +PE+ K PS ALL+AY + EKAE +M +M G
Sbjct: 102 AVHLDLVAKVRGLASAVKFFEDMPERAKAPSTCNALLHAYVQHGAREKAEAMMAEMARAG 161
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ + +N MM++Y +G +++ ++ E+ + D T+++ L+ C+ + +
Sbjct: 162 YLTCALPFNHMMSLYMASGELERVPEMIKELRRYTVP-DLVTYNMWLTYCSKKKSVKSAE 220
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
K+ A+M+ DR VV DW ++ S Y+ AGL + L + E M K AY ++T
Sbjct: 221 KVFALMKDDR-VVPDWMTFSLLGSIYINAGLHVEGRNALVEMEK-MASRKERAAYSSLLT 278
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVY-NRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
YA+ ++ ++ RVW + ++ + + + Y C+++SL +F+ + +AE ++ EWES +
Sbjct: 279 LYASLSDRGNLDRVWNKMRETFRKFSDTEYKCMLTSLTRFNDIAAAEGLYREWESASGTR 338
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
D RIPN ++ Y + G++ KAE+ + + +G +P+ TW L GYL +N+++K +E +
Sbjct: 339 DSRIPNTILSYYIKNGMIEKAESFLGQIVEKGVKPSYSTWELFIWGYLGDNKTDKVLECL 398
Query: 422 KKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLLNN 481
KKAL LE +W+P+ E A +K DIE A+ + + ++ ++ + +L
Sbjct: 399 KKALSSLE---KWEPNHELATAIFSQVEKTGDIEAAEKLLVVFRDAGYVTTEMYNSVLRT 455
>gi|297734632|emb|CBI16683.3| unnamed protein product [Vitis vinifera]
Length = 423
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 236/430 (54%), Gaps = 12/430 (2%)
Query: 60 MGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSN-FVLT 118
M +P +L+QW EG+ L +L ++K+ R +KRF AL++ WM + F L+
Sbjct: 1 MENPEMGSASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALEVYEWMNNRGERFRLS 60
Query: 119 PADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQM 178
+D AI+LDLIAKV G+ A YF+ +P+ LK +Y ALLNAY AK +KAEI+++++
Sbjct: 61 SSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEILIEKL 120
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG 238
R++G + +N MM +Y K+ S++ EM K I D Y+++I LS+C +
Sbjct: 121 RNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSSCEST--- 177
Query: 239 EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYD 298
E ++++ M+ +R + +WT ++T A+ Y+K G +KA L+K E + N+ Y
Sbjct: 178 ERMEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVES-RITNRDRMPYH 236
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
++I+ Y + GNK +V R W YK + N GY +ISSL++ +E AEKI+EEW S
Sbjct: 237 YLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIYEEWLSV 296
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+D RI N L+ Y + G L KAE + G +PN TW ++A G +
Sbjct: 297 KSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAEGNTGVKKISDA 356
Query: 418 VEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL--TGKEIISADLQ 475
+ K+A VL E WKP ++A L ++E D + + LL G E A++
Sbjct: 357 LSCFKRA-VLAEGSNGWKPKPVNVSAFLDLCEEEADTATKEALMGLLRQMGYEDDGAEM- 414
Query: 476 DRLLNNIRNG 485
LLN ++G
Sbjct: 415 --LLNQFQSG 422
>gi|242034057|ref|XP_002464423.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
gi|241918277|gb|EER91421.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
Length = 496
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 234/451 (51%), Gaps = 6/451 (1%)
Query: 30 STATGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRP-LDMEQLRI 88
S A TS+R + R S L L P+G P +VP ++ W R L +L+
Sbjct: 26 SRAVATSSRSNSEEERPPQS---LQSTLWPLGHPCTLLVPEIELWAARPRNRLRAVELQR 82
Query: 89 IIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEK 148
I+++ R R AL++S WM K + P D AI LDLI +V G+ A +YFN + +K
Sbjct: 83 IVRELRKRHRHRQALEVSEWMNLKGHVKFLPKDHAIHLDLIGQVHGVGAAETYFNNLSDK 142
Query: 149 LKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
K Y ALLN Y +KA Q M++ G V + YN++M +Y G ++++
Sbjct: 143 DKTEKPYGALLNCYTRELLVDKALAHFQNMKELGFVFSALSYNNLMGLYTNIGQHERVPM 202
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+M EM+ GI D +++ I +++ +D G++ + ME + +V+DW YA AS Y
Sbjct: 203 VMAEMKRDGIVPDNFSYRICINSYGIRADFFGLENTLEEMECEPQIVVDWNTYAVVASNY 262
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY- 327
+K L +KA + LRK+E M K AY +I+ Y G+K +V R+W + N K Y
Sbjct: 263 IKGYLREKAYSALRKAEA-KMDKKDGDAYGHLISLYGHLGDKLEVKRLWALHMLNCKRYI 321
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
N+ Y +++ L+K D + AE + +EWES D ++PN L+ Y ++GLL KAETL+
Sbjct: 322 NKDYTNMLAVLVKLDEITEAEDLLKEWESSKNAFDFQVPNVLLTGYRQKGLLDKAETLLD 381
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGY 447
+G P +W+++A GY + K E K AL + + W P + L Y
Sbjct: 382 GFLKKGKTPTSTSWWIVAIGYAEKGDVAKAYELTKNALSVFAPNSGWIPRPSIIEMILKY 441
Query: 448 YKKERDIEGADYFIKLLTGKEIISADLQDRL 478
E +++ + F+ LL +++D+ + L
Sbjct: 442 LGNEGEVKDVEAFVNLLKVAVPMNSDMTEAL 472
>gi|357146877|ref|XP_003574143.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Brachypodium distachyon]
Length = 511
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 137/431 (31%), Positives = 234/431 (54%), Gaps = 9/431 (2%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEG----RPLDMEQLRIIIKKFRLYKRFSHALQISMW 108
L L P+G P+ +VP +++W ++ RP+++E+ I+K+ R +R AL++S W
Sbjct: 59 LQSTLWPLGHPSTLLVPEIERWADKPGNRLRPVELER---IVKELRKRRRHRQALEVSEW 115
Query: 109 MTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSA 168
M+ K P D A+ LDLI +V G+ A +YFN + +K K Y ALLN Y
Sbjct: 116 MSAKGLVKFLPKDHAVHLDLIGQVHGVGAAEAYFNKLADKDKTEKPYGALLNCYTRELLV 175
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
+K+ Q+M++ G V ++ YN++M +Y G ++K+ S++ EM+ GI D +++ I
Sbjct: 176 DKSLAHFQKMKELGFVFSSLPYNNLMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRIC 235
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM 288
+++ A +D G++ + ME + +V+DW YA A+ Y+K L DKA++ L+K+E
Sbjct: 236 INSYGARADFFGMENTLEEMECEPQIVVDWNTYAVLANNYIKGNLRDKAISALQKAEA-K 294
Query: 289 MHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY-NRGYICVISSLLKFDGMESA 347
+ K S Y+ +++ Y G+K +V R+W N K + N+ Y +++ LLK D +E A
Sbjct: 295 IDIKDSDTYNHLMSLYGQLGDKSEVKRLWALQMSNCKRHINKDYTTMLAMLLKLDEIEEA 354
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
E + +EWES D +PN L+ Y ++ LL KAE L+ +G P +W ++A G
Sbjct: 355 EALLKEWESSENAFDFHVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPTSTSWAIVAIG 414
Query: 408 YLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGK 467
Y + K E K AL + + W P + L Y E +++ + F+ LL
Sbjct: 415 YAEKGDVAKAYELTKNALCVYAPNSGWIPRPAMIEMILKYLGDECNLKDVETFVHLLQAA 474
Query: 468 EIISADLQDRL 478
+++D+ D L
Sbjct: 475 VPMNSDMTDAL 485
>gi|218195308|gb|EEC77735.1| hypothetical protein OsI_16848 [Oryza sativa Indica Group]
Length = 1300
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 139/408 (34%), Positives = 231/408 (56%), Gaps = 5/408 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LYR ++ +G + L W E R LD +L I ++ R ++RF+ ALQ+ WMT++
Sbjct: 78 LYRRIA-VGHGGRPVGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMTER 136
Query: 113 SN-FVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
+ F L+ +D+AI+LDLIAKV+G+ A YF +P+ LK Y +LLN YA A EK
Sbjct: 137 RDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKT 196
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E +QMR +G T+ +N +MN Y +K+ L+ EM E+ + D T++I + +
Sbjct: 197 ESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIKS 256
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
CAA D + ++++ M D VV +WT Y T AS ++K G S+KA L+++E
Sbjct: 257 CAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTT-G 315
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGYICVISSLLKFDGMESAEKI 350
+ + + +++T Y+ G K++V RVW YK ++N GY V+S+L++ +E AE +
Sbjct: 316 REKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELL 375
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+EEW S++ D + N L+ Y R G + KAE + + +G P TW ++ T YL+
Sbjct: 376 YEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAYLK 435
Query: 411 NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
+ QS + + ++KA + ++W+P + + L +K++ D E AD
Sbjct: 436 DGQSSEALSCLEKATAVASP-SKWRPRPTNVESLLANFKEKNDAESAD 482
>gi|293331503|ref|NP_001168643.1| uncharacterized protein LOC100382430 [Zea mays]
gi|223949857|gb|ACN29012.1| unknown [Zea mays]
gi|413933913|gb|AFW68464.1| hypothetical protein ZEAMMB73_255812 [Zea mays]
Length = 500
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 138/420 (32%), Positives = 222/420 (52%), Gaps = 3/420 (0%)
Query: 57 LSPMGDPNDSMVPLLDQWVEEGRPL-DMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNF 115
L P+G P+ +VP ++ W R L +L+ I+K+ R +R AL++S WM+ K +
Sbjct: 52 LFPLGHPSTLLVPEIELWAARPRNLLRAVELQRIVKELRKRRRHRQALEVSEWMSLKGHV 111
Query: 116 VLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIM 175
P D AI LDLI ++ G+E A +YFN + +K K Y ALLN Y +KA
Sbjct: 112 KFLPKDHAIHLDLIGQIHGVEAAETYFNNLSDKDKTEKPYGALLNCYTRELLVDKALAHF 171
Query: 176 QQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAA 235
+ M++ G V T+ YN +M +Y + G ++++ S+M EM+ GI D +++ I +++
Sbjct: 172 RNMKELGFVFSTLPYNDLMGLYTRIGQHERVPSVMAEMKSNGIVPDNFSYRICINSYGTR 231
Query: 236 SDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR 295
+D G++ + ME + +V+DW YA AS Y+K L +KA + L K+E + +
Sbjct: 232 ADFFGLENTLEEMECEPQIVVDWNTYAVVASNYIKGDLREKAYSALSKAEA-KLDKQDPD 290
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQNLKVY-NRGYICVISSLLKFDGMESAEKIFEEW 354
AY +I+ Y G+K + R+W N K Y NR Y+ ++S L+K D + AE + +EW
Sbjct: 291 AYRHLISLYGNLGDKSEAKRLWAVQMSNCKRYINRDYMNMLSVLVKLDEITEAEDLLKEW 350
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
ES D R+PN L+ Y ++ LL KAE L+ +G P +W ++A GY +
Sbjct: 351 ESSQNSFDFRVPNVLLTGYRQKALLDKAEMLLDGFLKKGKTPPSTSWGIVAIGYAEKGDV 410
Query: 415 EKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADL 474
K E K AL + T W P L L Y E +++ + F+ LL + +D+
Sbjct: 411 AKAYEMTKNALSVHAPNTGWIPRPSMLEMILKYLGDEGEVKDVEAFVSLLKAAVPVDSDM 470
>gi|326530906|dbj|BAK01251.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 511
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 134/431 (31%), Positives = 234/431 (54%), Gaps = 9/431 (2%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEG----RPLDMEQLRIIIKKFRLYKRFSHALQISMW 108
L L P+G P+ +VP +++W ++ RP+++E+ I+K+ R +R AL++S W
Sbjct: 59 LQSTLWPLGHPDTLLVPEIERWADKPGNRLRPVELER---IVKELRKRRRHRQALEVSEW 115
Query: 109 MTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSA 168
M+ K + P D A+ LDLI +V GI A +YFN +P+K K Y ALLN Y
Sbjct: 116 MSAKGHVRFLPKDYAVHLDLIGQVHGIGAAEAYFNTLPDKDKTEKPYGALLNCYTRELMV 175
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
+ + Q+M++ G V ++ YN++M +Y G ++K+ S++ EM+ GI D +++ I
Sbjct: 176 DGSLAHFQKMKELGFVFSSLPYNNLMGLYTNIGQHEKVPSVIAEMKGSGIMPDNFSYRIC 235
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM 288
+++ +D G++ + ME + +V+DW YA AS Y+K L +KA++ L+K+E
Sbjct: 236 INSYGTRADFFGMENTLEDMECEPQIVVDWNTYAVVASNYIKGNLREKAISALKKAEA-K 294
Query: 289 MHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY-NRGYICVISSLLKFDGMESA 347
+ K S Y+ +I+ Y G+K ++ R+W N K + N+ Y +++ L++ D +E A
Sbjct: 295 IDIKDSDTYNHLISLYGQLGDKSEMRRLWGLQMSNCKRHINKDYTTMLAMLVRLDEIEEA 354
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
E + +EWES D +PN L+ Y + +L KAE L+ +G P +W ++A G
Sbjct: 355 EALLKEWESSENAFDFHVPNVLLTGYRHKDMLDKAEALLDDFLKKGKMPPSTSWAIVAIG 414
Query: 408 YLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGK 467
Y + K E +K AL + + W P + L Y E D++ + F++LL
Sbjct: 415 YAEKGDCAKAYELIKNALCVYVPRSGWIPRPAMIEMILKYLGDEGDLKDVETFVQLLQAA 474
Query: 468 EIISADLQDRL 478
+++ + D L
Sbjct: 475 MPMNSHMTDAL 485
>gi|255545872|ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547082|gb|EEF48579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 496
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 248/445 (55%), Gaps = 4/445 (0%)
Query: 37 TREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLY 96
R ++ S + G + L + + P ++ +L +W++ G + + QLR I
Sbjct: 15 NRSLSTSPKNGYTNSNLKNQIMKLKSPGLNITSILQKWIDNGHKVTVSQLRYINGLLVKS 74
Query: 97 KRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVP-EKLKLPSVY 155
KR+ HAL+I WM + NF ++ +D A+RL+LI KV GIE+A YFN +P + + +
Sbjct: 75 KRYKHALEIFTWMETQKNFRMSVSDYALRLELIIKVNGIEEAEEYFNFIPHDSVTRKAAS 134
Query: 156 IALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEE 215
ALL+ Y K KAE +M ++ + GL+ +N MM +Y T Y+K+ ++ +M+
Sbjct: 135 FALLHGYVKVKDVVKAEALMMKLYNLGLIVNCYPFNEMMKLYMATSQYEKVALVIDQMKR 194
Query: 216 KGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
I + ++++ +S+ S ++ + M D V + W+ AT A+ Y KAG+ D
Sbjct: 195 NKIALNLLSYNLWMSSYGEVSKVVKVELVYKEMVNDDNVEVGWSTLATLANIYTKAGIVD 254
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICV 334
KAL L+ +E ++ + Y F++TQY++ NK+ V R+W+ K N ++ Y+CV
Sbjct: 255 KALLALKNAEKILSTSHL-LGYFFLMTQYSSLKNKEGVQRLWEACKGVNGRITCANYMCV 313
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
+S L+K + AEK+F +WE +DIR+ N L+ AY R+GL++KAE+L RG
Sbjct: 314 LSCLVKVGDLLEAEKVFRDWELNCRKYDIRVSNVLLGAYVRKGLMNKAESLHLHTLDRGG 373
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDI 454
PN +T ++ G++++ + +K ++AM +A+ +LE W+PS + + + ++ R+
Sbjct: 374 CPNYKTLEILMEGWVKSQKMDKAIDAMTQAISMLEH-CHWRPSHGIIMSIAEHLERNRNF 432
Query: 455 EGADYFIKLLTGKEIISADLQDRLL 479
E A++FI+++ + S L LL
Sbjct: 433 EDANHFIQVIHHLGVASLPLYKVLL 457
>gi|357446577|ref|XP_003593564.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482612|gb|AES63815.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 495
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 236/438 (53%), Gaps = 5/438 (1%)
Query: 28 SYSTATGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLR 87
S +T G+ R S K S LY ++SP+G+ S+ P LD WV +G + + +L+
Sbjct: 8 SIATNIGSRNRSYYTSKTKKPS---LYSVISPLGNQTTSVAPQLDDWVYKGNKVSVGELQ 64
Query: 88 IIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPE 147
I++ R RF+ ALQ+S WM K + +P + A+ LDL +V G A +YFN + +
Sbjct: 65 RIVRDLRKRSRFTQALQVSEWMNKIGVCIFSPVEHAVHLDLTGRVHGFYAAETYFNSLKD 124
Query: 148 KLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLD 207
+ + ALLN Y + +K+ +++M++ G ++ YN++M +Y G ++K+
Sbjct: 125 IERNEKTHGALLNCYVRQRQVDKSLSHLKKMKELGFALSSLTYNNIMCLYTNIGQHEKVS 184
Query: 208 SLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
+ +EM+E + D +++ I + + SD +G++ I+ ME+ +V+DW Y+ A+
Sbjct: 185 DVFNEMKENHVLPDNFSYRICIGSYGVRSDIDGMNAILKEMESQPHIVMDWNTYSVVANF 244
Query: 268 YVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-V 326
Y+KA LS +A+ LRK E + +K Y+ +I+ YA G K++VLR+W K K
Sbjct: 245 YIKAELSSEAIDALRKCEK-RLDDKDGEGYNHLISLYARLGKKNEVLRLWDMEKSACKRC 303
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
NR +I ++ SL+K + + A+KI +EWE C+D +PN ++ Y + KAE ++
Sbjct: 304 LNRDFITMLESLVKLEEFDEADKILKEWEFSGNCYDYGVPNVVVVGYSEKDFPEKAEAIL 363
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLG 446
+ + +W L+A YL + EK +E +K A+ L + KP+ +++
Sbjct: 364 QDIWKKRKYTDTSSWILVADRYLLKGEMEKALECLKTAVCLYPENKKRKPNHRVISSIYS 423
Query: 447 YYKKERDIEGADYFIKLL 464
+ +E A+ ++LL
Sbjct: 424 WIGDNASVEDAEALVRLL 441
>gi|226530677|ref|NP_001151760.1| tetratricopeptide-like helical [Zea mays]
gi|195649553|gb|ACG44244.1| tetratricopeptide-like helical [Zea mays]
gi|223942137|gb|ACN25152.1| unknown [Zea mays]
gi|413916645|gb|AFW56577.1| Tetratricopeptide-like helical [Zea mays]
Length = 501
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/424 (32%), Positives = 235/424 (55%), Gaps = 16/424 (3%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S V +L +W +EGR + QL ++++ R Y RF HAL+I WM + L P D
Sbjct: 43 PKRSAVVVLQRWADEGRTVQKYQLNRVVRELRKYGRFKHALEICEWMRTQPEMRLLPGDH 102
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A+ LDL+AKV+G+ A +F +PE+ K PS ALL+AY + EKAE ++ +M G
Sbjct: 103 AVHLDLVAKVRGLASATKFFEDMPERAKGPSTCNALLHAYVQNGAREKAEAMLAEMARVG 162
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ + +N MM++Y TG +++ ++ E+ + D T++I L+ C+ + +
Sbjct: 163 YLTCALPFNHMMSLYMATGELERVPEMIKELRRYTLP-DLVTYNIWLTYCSKKDSVKSAE 221
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYD 298
K+ +M+ D VV DW ++ S Y+ AGL V ++ ++ M + SR AY
Sbjct: 222 KVFGLMKDD-CVVPDWMTFSLLGSIYINAGLH-----VEGRNALVEMEKRASRKERAAYS 275
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNLKVY-NRGYICVISSLLKFDGMESAEKIFEEWESR 357
++T YA+ ++ ++ RVW + + + + + Y C+++SLL+FD + +AE IF EWES
Sbjct: 276 SLLTLYASLSDRGNLDRVWNKMRGTFRKFSDTEYKCMLTSLLRFDDIAAAESIFSEWEST 335
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ D RIPN ++ Y + G++ KAE+ + +G +P+ TW GYL ++++K
Sbjct: 336 SGTRDSRIPNTILSYYIKNGMIKKAESFLDHIVEKGVKPSYSTWEAFVWGYL-GDKTDKV 394
Query: 418 VEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDR 477
+E MKKAL LE +W+P+ E A +K DIE A+ + + E ++ ++ +
Sbjct: 395 LECMKKALSCLE---KWEPNHELATAIFSQIEKTGDIEAAEKLLVIFRDAEYVTTEMYNS 451
Query: 478 LLNN 481
+L
Sbjct: 452 VLRT 455
>gi|357131918|ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 545
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 145/434 (33%), Positives = 240/434 (55%), Gaps = 15/434 (3%)
Query: 53 LYRMLSPMGDPNDSMVP-LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTK 111
LYR LS +G+ + V +L++WV EGR L +K+ R YKR + AL++ WM
Sbjct: 80 LYRRLSALGNAGEGSVSRVLNKWVREGREARSVDLERYVKELRKYKRHAQALELMDWMVH 139
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
++ + AIRLDL+ KV+GIE A YFN +P+ K Y ALLN Y +K EKA
Sbjct: 140 TKGMNMSYTNHAIRLDLVYKVRGIEAAEKYFNGLPDPAKNHRTYGALLNCYCSSKKEEKA 199
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
+ +M D G+ T+ +N++M++Y + G +KK+ L EM+ K + D T +L+++
Sbjct: 200 TDLFHKMDDLGIASSTLPFNNLMSLYMKLGQHKKVAGLFEEMKAKNVKPDNLTCCVLMTS 259
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
AA + + +++++ ME ++ L W+ Y+T AS YV AGL +KA + L+K E L+
Sbjct: 260 YAALNKIDAVEEVLKEME-EKNAALGWSAYSTLASIYVSAGLVEKAESALKKLEGLVQPR 318
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKI 350
+ +DF+++ YA+ GN +V RVW K KV N Y ++ +L K + + ++I
Sbjct: 319 DGRQPFDFLMSLYASVGNLSEVNRVWDVVKATFPKVTNTSYFSMLQALYKLNDADRIKQI 378
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
FEEWES + C+D+++ N + A+ + GL +AE L KA+ +G + + +T L Y+
Sbjct: 379 FEEWESNHECYDVKLTNIMTRAHLKNGLTKEAELLWEKAKAKGADFDSKTCELFLDHYM- 437
Query: 411 NNQSEKGVEAMKKALVLLEAGTRW-----KPSKECLAACLGYYKKERDIEGADYFIKLLT 465
G E MK AL +E T+ K +E + Y+++++D++GA+ L
Sbjct: 438 ------GTEDMKSALHWVENVTKLPKKAGKLDQEKIQKFSKYFEEQKDVQGAEKLCSCLR 491
Query: 466 GKEIISADLQDRLL 479
I + + LL
Sbjct: 492 TLGCIDGKVYESLL 505
>gi|357151797|ref|XP_003575907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 135/425 (31%), Positives = 239/425 (56%), Gaps = 16/425 (3%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S V +L +W EEGR + QL ++++ R Y+RF HAL+I WM + L P D
Sbjct: 42 PKRSAVVVLRRWTEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMRTQPEMKLLPGDH 101
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A+ LDL+AKV+G+ A +F VPE+ K PS ALL+AY +KAE ++++M D G
Sbjct: 102 AVHLDLVAKVRGLASAEKFFEDVPERAKGPSTCNALLHAYVQNGVRDKAEAMLREMADAG 161
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ + +N MM++Y +G +K+ ++ E+ I D T++I L+ C+ + + +
Sbjct: 162 YLTCALPFNHMMSMYMSSGELEKVPEMIKELRRYTIP-DLVTYNIWLTYCSRKNSVKTAE 220
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYD 298
K+ +M+ D+ V DW ++ AS Y+ AGL K + ++ M + SR AY
Sbjct: 221 KVFDLMKDDK-VFPDWMTFSLMASIYINAGLHVKG-----RDALVEMEKRASRKERTAYS 274
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNLKVY-NRGYICVISSLLKFDGMESAEKIFEEWESR 357
++T YA+ ++ ++ RVW + ++ + + + Y C+++SL +F + +AE ++ EWES
Sbjct: 275 SLLTLYASLSDRGNLDRVWSKMREIFRKFSDTEYKCMLTSLTRFGDITAAESVYSEWESE 334
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS-EK 416
+ D RIPN ++ + + G + AE+ + +G +P+ TW L GYL N++ +K
Sbjct: 335 SGTRDSRIPNTILSFHIKNGKMEMAESFLQHIMQKGVKPSYSTWELFVWGYLGNDERIDK 394
Query: 417 GVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQD 476
+E +KKAL L+ +W+P+ + +AA +K DIE A+ + +L G ++ ++ +
Sbjct: 395 ILECLKKALSSLD---KWEPNPQLVAALFSLIEKRGDIEAAEELLVVLRGAGYVTTEIYN 451
Query: 477 RLLNN 481
+L
Sbjct: 452 SVLRT 456
>gi|242096946|ref|XP_002438963.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
gi|241917186|gb|EER90330.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
Length = 502
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 227/426 (53%), Gaps = 7/426 (1%)
Query: 57 LSPMGDPNDSMVPLLDQWVEEGRP---LDMEQLRIIIKKFRLYKRFSHALQISMWMTKKS 113
L P+G+P +VP ++ W RP L LR I+K+ R +R AL++S WM K
Sbjct: 56 LWPLGNPGTLLVPEIELWA--ARPENHLRDVDLRRIVKELRTRRRHRQALEVSEWMNLKG 113
Query: 114 NFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEI 173
+ P D A+ LDLI + G+ A +YFN + +K K Y ALLN Y + +KA
Sbjct: 114 HVKFLPKDHAVHLDLIGHIHGVGAAETYFNNLSDKDKTEKPYGALLNCYTRERLVDKALA 173
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
Q+M++ G V + YN++M++Y ++++ S+M EM+ GI D +++ I +++
Sbjct: 174 HFQKMKELGFVFTALPYNNLMSLYTNIEQHERVPSVMAEMKSNGIVPDNFSYRICINSYG 233
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF 293
+D G++ + ME + +V+DW Y AS Y+K L +KA + L+K+E M
Sbjct: 234 TRADFFGLENTLEEMECEPQIVVDWNTYTVVASQYIKGDLREKAYSALKKAEAKMGIKDL 293
Query: 294 SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY-NRGYICVISSLLKFDGMESAEKIFE 352
+ AY +I+ Y G+K +V R+W N + + N Y +++ L+K D + AE + +
Sbjct: 294 A-AYRHLISLYGHLGDKSEVKRLWAVQMSNCQRHLNTDYTNILAVLVKLDEIAEAEDLLK 352
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
EWE+ D ++PN L+ YC++GLL KAE L+ ++G P +W ++A+GY +
Sbjct: 353 EWETSKNEFDFKVPNVLLTWYCQKGLLDKAEALLDGFLIKGKMPPSTSWEIVASGYTEKG 412
Query: 413 QSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISA 472
+ E K AL + + W P + L Y ER+++ + FI LL +++
Sbjct: 413 DVARAYELTKNALYMYAPNSGWVPEPSMIEMILKYLGDEREVKDVEAFIDLLKVAVPMNS 472
Query: 473 DLQDRL 478
D+ + L
Sbjct: 473 DMTEAL 478
>gi|125575304|gb|EAZ16588.1| hypothetical protein OsJ_32060 [Oryza sativa Japonica Group]
Length = 475
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 217/387 (56%), Gaps = 8/387 (2%)
Query: 102 ALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNA 161
+ +SMWMT++ + L+P DVA RL+LI+KV G+++A YF+ VP +L+ Y +LL
Sbjct: 63 GIPLSMWMTERRHLHLSPGDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRC 122
Query: 162 YACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCD 221
YA A+ EKAE + + MR G+ + YN+MMN+Y Q G +++DS+ MEE GI D
Sbjct: 123 YAEAERVEKAEELFENMRGMGMAN-SYAYNAMMNLYSQIGQVERVDSMYKAMEEGGIVPD 181
Query: 222 KYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL 281
+T L+SA A D E I+K++ +A ++ W +A ++KAG+ ++AL
Sbjct: 182 IFTIDNLVSAYADVEDVEAIEKVLE--KASCNNLMSWHSFAIVGKVFMKAGMQERALQAF 239
Query: 282 RKSEVLMMHNKFSR-AYDFVITQYAACGNKDDVLRVWKRYKQNLKVY--NRGYICVISSL 338
++SE + K R AY F++T YA +V R+W Y+ + N Y+C IS L
Sbjct: 240 QESEKRITARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYRSKVPASACNTMYMCRISVL 299
Query: 339 LKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
LK + + AEK +EEWES+++ HD R+ N L+ AYC+ GL+ KAE L+ + +G
Sbjct: 300 LKMNDIVGAEKAYEEWESKHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTLFS 359
Query: 399 RTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
TWY +A GY + Q K + KKAL A WKP + + Y+ +++++E A+
Sbjct: 360 NTWYKLAGGYFKVGQVSKAADLTKKALA--SASNEWKPDLANVLMSINYFAEQKNVEAAE 417
Query: 459 YFIKLLTGKEIISADLQDRLLNNIRNG 485
LL ++ D+ LL N
Sbjct: 418 EMASLLQRLVPLTRDVYHGLLKTYVNA 444
>gi|108862755|gb|ABA99305.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215704853|dbj|BAG94881.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712260|dbj|BAG94387.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 514
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 130/424 (30%), Positives = 232/424 (54%), Gaps = 15/424 (3%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S +L +W EEGR + QL ++++ R Y+RF HAL+I WM + L P D
Sbjct: 55 PKRSAAVVLRRWAEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMRTQPEMRLLPGDH 114
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A+ LDL+AKV+G+ A +F +PE+ K PS ALL+AY +KAE ++++M G
Sbjct: 115 AVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAKAG 174
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ + +N MM++Y +G +K+ ++ E+ I D T++I L+ C+ + + +
Sbjct: 175 YLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTIP-DLVTYNIWLTYCSKKNSVKAAE 233
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYD 298
K+ +M+ +R VV DW ++ S Y+ AGL K + ++ M + SR AY
Sbjct: 234 KVYDLMKDER-VVPDWMTFSLLGSIYINAGLHVKG-----RDALVEMEKRASRKERAAYS 287
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNLKVY-NRGYICVISSLLKFDGMESAEKIFEEWESR 357
++T YA+ ++ ++ RVW++ ++ + + + Y C+++SL +F + AE + EWES
Sbjct: 288 SLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEWESA 347
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ D RIPN ++ Y + G++ KAE + +G +P+ TW L GYL + + +K
Sbjct: 348 SGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYLSDGRMDKV 407
Query: 418 VEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDR 477
+E +KKAL LE +W P+ + A +++ DIE A+ + + ++ ++ +
Sbjct: 408 LECLKKALSCLE---KWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREAGYVTTEIYNS 464
Query: 478 LLNN 481
+L
Sbjct: 465 VLRT 468
>gi|225459164|ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Vitis vinifera]
Length = 475
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 126/404 (31%), Positives = 228/404 (56%), Gaps = 5/404 (1%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S +L W+++G + LR + ++ KR HAL+I WM ++ F ++ AD
Sbjct: 23 PRRSATAVLQNWIDQGHKVTASDLRNVSRQLLKSKRHKHALEILAWMEAQNRFQMSAADH 82
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
AIRL+LI K+Q + +A YF +P + + LL+AY ++ EKAE +M ++ D G
Sbjct: 83 AIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAIEKAEALMLKLNDLG 142
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
L +N MM +Y T ++++ +++ +M++ I + ++++ +SAC+ S +
Sbjct: 143 LTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYNLWMSACSEVSGLASAE 202
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE-VLMMHNKFSRAYDFVI 301
+ M D+ V + W+ +T A+ Y+K+GL KA L+ +E L HN+ Y F+I
Sbjct: 203 MVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKANLALKNAEKKLSAHNRL--GYFFLI 260
Query: 302 TQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
T YA+ NK++VLR+W+ K+ ++ + Y+C++ L+K + AE+IF EWES+
Sbjct: 261 TMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAEAERIFREWESKCWK 320
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
+DIR+ N L+ AY R G + KAE+L RG PN +TW ++ G++++ +K + A
Sbjct: 321 YDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNYKTWEILMEGWMKSQNMDKAINA 380
Query: 421 MKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
MKK +L+ W+P+ + A Y ++ ++ + ++K++
Sbjct: 381 MKKGFSMLK-HCDWRPNHGLVTAIARYLEEHGNVNDLNQYVKVI 423
>gi|225468646|ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
[Vitis vinifera]
Length = 489
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 232/414 (56%), Gaps = 4/414 (0%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY L G S+ L+ +++ + + ++ +KK R KRF AL++S M K+
Sbjct: 24 LYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDTVKKLRDRKRFYPALKLSETMAKR 83
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
+T +D AI LDLI K +G+ A +YF +PE K Y ALLN Y EKAE
Sbjct: 84 G-MNMTISDQAIYLDLITKTRGVAAAENYFIDLPETSKNHLTYGALLNCYCKELLTEKAE 142
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+M++M++ L ++ YNS+M +Y + G +K+ +++ E++ I D YT++I + A
Sbjct: 143 ALMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYNIWMRAL 202
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
AA +D G+++++ M+ D V DWT Y+ AS YV AG+ +KA L++ E
Sbjct: 203 AAVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYVDAGVFEKAEKALKELEKRNACRD 262
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIF 351
+ A+ F+IT Y GN +V RVW+ + K N Y+ +I L+ + AEK F
Sbjct: 263 LT-AFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPGAEKCF 321
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
EWES +DIR+ N LI AY + GLL KAE L A+ RG +PN +TW + +L+N
Sbjct: 322 REWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHARRRGAKPNAKTWEIFLAYHLKN 381
Query: 412 NQSEKGVEAMKKALVLLEA-GTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
+ ++ V+ + A+ G +W PS E + + ++++E+D++GA+ F+++L
Sbjct: 382 REMKQAVDCVANAISTGRGDGQKWVPSPEIIGVFMQHFEQEKDVDGAEGFLEIL 435
>gi|15240937|ref|NP_198098.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214236|sp|Q3E911.1|PP400_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27460
gi|332006308|gb|AED93691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 142/454 (31%), Positives = 242/454 (53%), Gaps = 34/454 (7%)
Query: 19 LGNVLDSSSSYSTATGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEG 78
+ ++ D S + S A S +E+ LRK P S+ LL + ++ G
Sbjct: 23 VSSLADGSDTSSVANRNSLKEI---LRKNG--------------PRRSVTSLLQERIDSG 65
Query: 79 RPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQA 138
+ + +LR+I K+ R+ ALQ+ WM + + + D+A+RLDLI K G++Q
Sbjct: 66 HAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQG 125
Query: 139 ASYFNCVPEKLKLPSV--------YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
YF EKL SV Y+ LL AY K ++AE +M+++ G + +
Sbjct: 126 EEYF----EKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPF 181
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA 250
N MM +Y +G Y+K+ ++ M+ I + ++++ ++AC S ++ + M
Sbjct: 182 NEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVG 241
Query: 251 DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVITQYAACGN 309
D+ V + W+ T A+ Y+K+G +KA VL +E ++ N+ +R Y F+IT YA+ GN
Sbjct: 242 DKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKML--NRSNRLGYFFLITLYASLGN 299
Query: 310 KDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
K+ V+R+W+ K ++ YICV+SSL+K +E AE++F EWE++ +D+R+ N
Sbjct: 300 KEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNV 359
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLL 428
L+ AY R G + KAE+L RG PN +TW ++ G+++ EK ++AM + VL+
Sbjct: 360 LLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVFVLM 419
Query: 429 EAGTRWKPSKECLAACLGYYKKERDIEGADYFIK 462
W+PS + A Y++KE IE A +++
Sbjct: 420 RR-CHWRPSHNIVMAIAEYFEKEEKIEEATAYVR 452
>gi|297837423|ref|XP_002886593.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332434|gb|EFH62852.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/448 (31%), Positives = 248/448 (55%), Gaps = 5/448 (1%)
Query: 35 TSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFR 94
+ +R+VT K LY L G + L+Q+++ + + ++ IKK R
Sbjct: 7 SRSRDVTKRSTKKYIEEPLYHRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLR 66
Query: 95 LYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV 154
+ AL++S M ++ T +D AI LDL+AK +GI +YF +PE K
Sbjct: 67 NRGLYYPALKLSEVMEERG-MNKTVSDQAIHLDLVAKARGITAGENYFVDLPETSKTELT 125
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +LLN Y EKAE ++ +M++ + ++ YNS+M +Y +TG +K+ +++ E++
Sbjct: 126 YGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGQTEKVPAMIQELK 185
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ + D YT+++ + A AA +D G+++++ M D V DWT Y+ AS YV AGLS
Sbjct: 186 AENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLS 245
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYIC 333
KA L++ E+ F+ AY F+IT Y G +V R+W+ + + K N Y+
Sbjct: 246 QKAEKALQELEMKNTQRDFT-AYQFLITLYGRLGKLTEVYRIWRSLRLAMPKTSNVAYLN 304
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+I L+K + + AE +F+EW++ +DIRI N LI AY + GL+ KA+ L KA RG
Sbjct: 305 MIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAKEGLIEKAKELKEKAPRRG 364
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA-GTRWKPSKECLAACLGYYKKER 452
+ N +TW + Y+++ +E M KA+ + + G +W PS+E + + Y+++++
Sbjct: 365 GKANAKTWEIFMDYYVKSGDMAHALECMSKAVSIGKGDGGKWIPSQETVRTLMSYFEQKK 424
Query: 453 DIEGADYFIKLL-TGKEIISADLQDRLL 479
D+ GA+ +++L G + I A++ + L+
Sbjct: 425 DVNGAENLLEILKNGTDNIGAEIFESLI 452
>gi|326531954|dbj|BAK01353.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 518
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 142/445 (31%), Positives = 232/445 (52%), Gaps = 18/445 (4%)
Query: 41 TISLRKGSSM-YKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRF 99
T R+G + ++L R+ SP + +D+W +E + L+ + + R +R+
Sbjct: 41 TAGEREGDPLSWRLLRLRSP-----GAAAAAIDRWAQERGRVSRPDLQRAVSQLRRARRY 95
Query: 100 SHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALL 159
HAL+I WM L P D A RLDLIAKV G QA Y+N +P + LL
Sbjct: 96 GHALEILSWMDSHKEIKLLPLDHAARLDLIAKVHGTSQAEEYYNKLPNSASREAASFPLL 155
Query: 160 NAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGID 219
+ Y ++ +KAE M ++ GL +N MM +Y T Y+K+ S++ M+ I
Sbjct: 156 HCYVAERNVQKAESFMASLQSIGLPVDPHSFNEMMKLYVATCEYEKVFSVIDLMKRNNIP 215
Query: 220 CDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALA 279
+ ++++ ++AC + SD + + M D + + W+ Y T A+ ++K GL+ KA A
Sbjct: 216 RNALSYNLWMNAC-SVSDVTSVQSVFKEMVNDGTIEVGWSTYCTLANIFMKHGLNSKAFA 274
Query: 280 VLRKSEVLMMHNKFSRA----YDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICV 334
LR +E K S A Y FV+T YAA G+ D V+R+W+ K ++ + Y+
Sbjct: 275 CLRTAET-----KLSTAQRLGYSFVMTCYAALGDSDGVMRLWEASKCVPGRIPSANYMSA 329
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I L+K ++ AE IF WE HD+R+ N L+ AY R G + KAE L +G
Sbjct: 330 ILCLIKVGDIDRAEWIFGSWEVECRKHDVRVSNVLLGAYVRNGWIEKAEKLHLHMLEKGG 389
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDI 454
PN +TW ++ G++Q+ Q +K V AMKKAL L++ G W+P + A +++++ +
Sbjct: 390 RPNYKTWEILMEGFVQSRQMDKAVNAMKKALSLMK-GCHWRPPLRLVEAIATFFEEQGNT 448
Query: 455 EGADYFIKLLTGKEIISADLQDRLL 479
+ A+ +IK+L + S L +L
Sbjct: 449 DDANRYIKVLQKFNLTSLPLYKSVL 473
>gi|255573975|ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532680|gb|EEF34462.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 490
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 139/414 (33%), Positives = 230/414 (55%), Gaps = 4/414 (0%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY L G + L+Q+++ + + ++ +KK R + AL++S M+K+
Sbjct: 25 LYFRLFKEGSSEVKVREQLNQFLKSSKRVYKWEVGDTLKKLRSRGLYYPALKLSEAMSKR 84
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
T +D AI LDL+AK +GI A +F +PE K Y ALLN Y E+AE
Sbjct: 85 G-MNKTVSDQAIHLDLVAKTRGIPAAEIFFIDLPETSKNHLTYGALLNCYCNQLMTEEAE 143
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+M++M++ L ++ YNS+M +Y + G +++ ++ EM+ I D YT+++ + A
Sbjct: 144 ALMEKMKELNLGLSSMSYNSLMTLYTKIGQPERIPGIIQEMKSDSIMPDSYTYNVWMRAL 203
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
AA +D G ++++ M+ D V DWT Y+ AS YV A L +KA L++ E +H
Sbjct: 204 AAVNDISGAERVIEEMKRDGRVAADWTTYSNLASIYVDAQLFEKAEKTLKELEKRNVHRD 263
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIF 351
S A+ F+IT Y GN ++ R+W+ + K N Y+ +I L+ + AEK F
Sbjct: 264 HS-AFQFLITLYGRIGNLHELYRIWRSLRLAFPKTSNISYLNMIQVLVNLKDLPGAEKCF 322
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
EWES +DIR+ N LI AY ++GLL KAE L +A RG +PN +TW + + Y +N
Sbjct: 323 REWESNCSGYDIRVANVLIKAYAKKGLLEKAEELKERAIGRGAKPNAKTWEIFSDYYFEN 382
Query: 412 NQSEKGVEAMKKALVLLEA-GTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
+ VE + A+ G +W PS E +A+ + ++++++D++GA+ FI++L
Sbjct: 383 GDIKLSVECLANAISKGRGDGQKWIPSPEVVASFMAHFEQQKDVDGAEGFIEIL 436
>gi|222637397|gb|EEE67529.1| hypothetical protein OsJ_24995 [Oryza sativa Japonica Group]
Length = 491
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 135/436 (30%), Positives = 224/436 (51%), Gaps = 18/436 (4%)
Query: 45 RKGSSMYKLYRMLSPMGDPNDSMVPLLDQWV-EEGRPLDMEQLRIIIKKFRLYKRFSHAL 103
RK + L L P+G P +VP +++W + G L +L I+
Sbjct: 57 RKPARPPSLQSTLWPLGHPGTLLVPEIERWAAKPGNRLRHVELERIV------------- 103
Query: 104 QISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYA 163
S WM K + P D A+ LDLI ++ G A +YFN +P+K K Y ALLN Y
Sbjct: 104 --SEWMNAKGHVKFLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYT 161
Query: 164 CAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKY 223
EK+ Q+M++ G V T+ YN++M +Y G ++K+ S++ EM+ GI D +
Sbjct: 162 RELLVEKSLAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNF 221
Query: 224 TFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
++ I +++ +D G++ + ME + +V+DW YA AS Y+K + +KA + L+K
Sbjct: 222 SYRICINSYGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKK 281
Query: 284 SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY-NRGYICVISSLLKFD 342
+E ++ K S +Y+ +I+ Y G+K +V R+W N + N+ Y +++ L+K +
Sbjct: 282 AEA-KINIKDSDSYNHLISLYGHLGDKSEVNRLWALQMSNCNRHINKDYTTMLAVLVKLN 340
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
+E AE + +EWES D ++PN L+ Y ++ LL KAE L+ +G P +W
Sbjct: 341 EIEEAEVLLKEWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTSWA 400
Query: 403 LMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIK 462
++A GY + + K E K AL + T W P + L Y E D+E + F+
Sbjct: 401 IVAAGYAEKGDAAKAYELTKNALCVYAPNTGWIPRPGMIEMILKYLGDEGDVEEVEIFVD 460
Query: 463 LLTGKEIISADLQDRL 478
LL +++D+ D L
Sbjct: 461 LLKVAVPLNSDMTDAL 476
>gi|224084592|ref|XP_002307350.1| predicted protein [Populus trichocarpa]
gi|222856799|gb|EEE94346.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 219/399 (54%), Gaps = 3/399 (0%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+L W+ G + + QL +I K+ KR+ AL+I WM ++NF +TP A+ ++LI
Sbjct: 65 VLQDWINNGNKVKLSQLNLISKQLLKSKRYKQALEILQWMENQNNFRITPGHHALMMELI 124
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
KV G+ +A YF +P + + LL+ Y + KAE M ++ GL+
Sbjct: 125 VKVNGLNKAGEYFERIPGSGSKKAASLPLLHGYVKERDISKAESFMIKLSSSGLLVTPHP 184
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
YN MM +Y Y+K+ ++ EM+ + + ++++ + A + + + M
Sbjct: 185 YNEMMKLYMALSQYEKVPLVIAEMKRNKLCRNVLSYNLWMGAFGEVFEVAKAEMVYKEMV 244
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN 309
+D V + W+ A+ A+ Y+KAG DKAL VL+ +E+ + N Y F+IT Y++ N
Sbjct: 245 SDENVGVGWSTLASLANVYIKAGFVDKALLVLKDAEMKLSTNG-RLGYFFLITLYSSLKN 303
Query: 310 KDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
K+ VLR+W+ K ++ Y+CVIS L+K + +AE++F EWE+ +DIR+ N
Sbjct: 304 KEGVLRLWEASKAVGGRIPCADYMCVISCLVKVGDLVAAEQVFAEWETNCFKYDIRVSNV 363
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLL 428
L+ AY R GL+ KAE+ RG PN +TW ++ G++++ + +K ++AMKK +L
Sbjct: 364 LLGAYVRNGLMGKAESFHLHTVERGGCPNYKTWEILMEGWVKSQKMDKAIDAMKKGFSVL 423
Query: 429 EAG-TRWKPSKECLAACLGYYKKERDIEGADYFIKLLTG 466
+ W+PS L A +++K + E A+++IK + G
Sbjct: 424 KVERCDWRPSHSILMAIAEHFEKHGNFEDANHYIKAVHG 462
>gi|449462348|ref|XP_004148903.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
gi|449491586|ref|XP_004158945.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
Length = 531
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 243/435 (55%), Gaps = 7/435 (1%)
Query: 46 KGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQI 105
KG L R L + P S V + +W EEGR + +L +++ R KR+ HAL++
Sbjct: 43 KGGGRDTLGRRLMSLIFPKRSAVTAIRKWQEEGRTVRKYELNRNVRELRKLKRYKHALEV 102
Query: 106 SMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACA 165
WMT + + L P D A+ LDLI K++G+ +A +F +P+K++ SV +LL+AY
Sbjct: 103 CEWMTLQKDMRLVPGDYAVHLDLICKIRGLNRAEKFFEDLPDKIREQSVCTSLLHAYVQN 162
Query: 166 KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF 225
+EKAE +M++M + G +K + +N M++++ +K+ +L+ + +K D T+
Sbjct: 163 NLSEKAEALMEKMSECGFLKSPLSFNHMLSLHISNKQLEKVPALIEGL-KKNTKPDVVTY 221
Query: 226 SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
++LL+ C +D E + I M+ + + DW ++T A+ Y K L++KA A L++ E
Sbjct: 222 NLLLNVCTLQNDTEAAENIFLEMKKTK-IQPDWVSFSTLANLYCKNQLTEKAAATLKEME 280
Query: 286 VLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGM 344
+ + + +++ Y G+K++V R+WK+ K + K+ +R Y+C+ISSL+K + +
Sbjct: 281 KMAFKSN-RLSLSSLLSLYTNLGDKNEVYRIWKKLKSSFRKMSDREYMCMISSLVKLNEL 339
Query: 345 ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
E AEK++ EWES + D R+ N ++ AY ++ + +AE+ + +GT P+ TW L+
Sbjct: 340 EEAEKLYTEWESVSGTRDTRVSNVMLGAYIKKNQIEQAESFYNRMLQKGTVPSYTTWELL 399
Query: 405 ATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
GYL+ NQ EK + +KA+ ++ +W + + +++ +I G + + +L
Sbjct: 400 TWGYLKENQMEKVLHFFRKAVNRVK---KWNADERLVKGVCKKLEEQGNINGVEQLLLIL 456
Query: 465 TGKEIISADLQDRLL 479
+ ++ + LL
Sbjct: 457 RNAGHVDTEIYNSLL 471
>gi|125591164|gb|EAZ31514.1| hypothetical protein OsJ_15655 [Oryza sativa Japonica Group]
Length = 531
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 215/387 (55%), Gaps = 4/387 (1%)
Query: 96 YKRFSHALQISMWMTKKSN-FVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV 154
+ S A + WMT++ + F L+ +D+AI+LDLIAKV+G+ A YF +P+ LK
Sbjct: 140 FHTHSLAKDVYDWMTERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRT 199
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +LLN YA A EK E +QMR +G T+ +N +MN Y +K+ L+ EM
Sbjct: 200 YGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMM 259
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
E+ + D T++I + +CAA D + ++++ M D VV +WT Y T AS ++K G S
Sbjct: 260 ERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNS 319
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGYIC 333
+KA L+++E + + + +++T Y+ G K++V RVW YK ++N GY
Sbjct: 320 EKAEESLKEAEKRTT-GREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQE 378
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
V+S+L++ +E AE ++EEW S++ D + N L+ Y R G + KAE + + +G
Sbjct: 379 VLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKG 438
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERD 453
P TW ++ T YL++ QS + + ++KA + + ++W+P + + L +K++ D
Sbjct: 439 GNPKPNTWEILGTAYLKDGQSSEALSCLEKATAVA-SPSKWRPRPTNVESLLANFKEKND 497
Query: 454 IEGADYFIKLLTGKEIISADLQDRLLN 480
E AD + +L + + L+N
Sbjct: 498 AESADRLMNVLRSRRCEENEEYKSLIN 524
>gi|242096944|ref|XP_002438962.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
gi|241917185|gb|EER90329.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
Length = 503
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 226/430 (52%), Gaps = 7/430 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWV-EEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTK 111
L+ L P+G P +VP ++ W G+ L +L ++K R R AL++S WM
Sbjct: 52 LWSTLCPLGKPGTLLVPEIELWAARSGKRLRPCELHFVVKDLRRRHRHRQALEVSEWMNL 111
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
K + P D A+ LDLI + G+ A +YFN + +K K Y ALL Y +KA
Sbjct: 112 KGHVKFLPKDHAVHLDLIGHIHGVGAAETYFNNLSDKDKTEKPYGALLYCYTRECLVDKA 171
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
Q+M++ G V + Y+++M +Y ++++ S+M EM+ GI + ++++I ++A
Sbjct: 172 LAHFQKMKELGFVFTPLPYSNLMILYANVEQHERVPSVMAEMKSNGIVPNNFSYNICINA 231
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
+D G++ + ME VV+DW YA AS Y+K L +KA + L+K+E M
Sbjct: 232 YGTRADFSGLENTLEEMEFASQVVVDWRTYADVASHYIKGDLREKAYSALQKAEA-KMDE 290
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK---VYNRGYICVISSLLKFDGMESAE 348
K S AY +I+ Y G+K ++ R+W Q LK N+GY +++ L+K D + AE
Sbjct: 291 KDSFAYSHLISLYGHLGDKSEIKRLW--VLQMLKCKGCINKGYKYMLTVLVKLDEIAEAE 348
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+ ++WES D ++PN L+ YC+ GLL KAE L+ +G +P+ +W ++A+ Y
Sbjct: 349 DLLKKWESSKNEFDFKVPNILLKGYCQWGLLDKAEALLDGFLRKGKKPSATSWAIVASAY 408
Query: 409 LQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKE 468
+ + E K+AL + + W P + L Y E +++ + FI LL
Sbjct: 409 AEKGDVPRAYELTKRALSMCVPDSGWIPEPSMIEVILKYLGDEGEVKDVEAFIDLLKVVV 468
Query: 469 IISADLQDRL 478
+++D+ + L
Sbjct: 469 PMNSDMTEAL 478
>gi|15219808|ref|NP_176276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097554|sp|O22714.1|PPR86_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g60770
gi|2462744|gb|AAB71963.1| Hypothetical protein [Arabidopsis thaliana]
gi|27754491|gb|AAO22693.1| unknown protein [Arabidopsis thaliana]
gi|28393975|gb|AAO42395.1| unknown protein [Arabidopsis thaliana]
gi|332195609|gb|AEE33730.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/448 (31%), Positives = 247/448 (55%), Gaps = 5/448 (1%)
Query: 35 TSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFR 94
+ +R+VT K LY L G + L+Q+++ + + ++ IKK R
Sbjct: 7 SRSRDVTKRSTKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLR 66
Query: 95 LYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV 154
+ AL++S M ++ T +D AI LDL+AK + I +YF +PE K
Sbjct: 67 NRGLYYPALKLSEVMEERG-MNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELT 125
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +LLN Y EKAE ++ +M++ + ++ YNS+M +Y +TG +K+ +++ E++
Sbjct: 126 YGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELK 185
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ + D YT+++ + A AA +D G+++++ M D V DWT Y+ AS YV AGLS
Sbjct: 186 AENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLS 245
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYIC 333
KA L++ E+ F+ AY F+IT Y G +V R+W+ + + K N Y+
Sbjct: 246 QKAEKALQELEMKNTQRDFT-AYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLN 304
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+I L+K + + AE +F+EW++ +DIRI N LI AY + GL+ KA L KA RG
Sbjct: 305 MIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRG 364
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA-GTRWKPSKECLAACLGYYKKER 452
+ N +TW + Y+++ + +E M KA+ + + G +W PS E + A + Y+++++
Sbjct: 365 GKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKK 424
Query: 453 DIEGADYFIKLL-TGKEIISADLQDRLL 479
D+ GA+ +++L G + I A++ + L+
Sbjct: 425 DVNGAENLLEILKNGTDNIGAEIFEPLI 452
>gi|115436124|ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|57899052|dbj|BAD87826.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532351|dbj|BAF04734.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|215694668|dbj|BAG89859.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706899|dbj|BAG93359.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 522
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 145/434 (33%), Positives = 237/434 (54%), Gaps = 15/434 (3%)
Query: 53 LYRMLSPMGDPNDSMVP-LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTK 111
LYR LS +G + V ++++WV EGR L +K+ R YKR +HAL++ WM
Sbjct: 57 LYRRLSALGGAGEGSVSRVMNKWVREGREARAADLAKYVKELRKYKRHAHALELMEWMVN 116
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
++ + AIRLDLI KV+GIE A YF +P+ K Y ALLN Y AK +KA
Sbjct: 117 TKGMNMSYTNHAIRLDLIYKVRGIEAAEQYFAGLPDPGKNHKTYGALLNCYCSAKMEDKA 176
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
I ++M + G+ T+ N++M++Y + G ++K+ SL EM+ K + D T +L+S+
Sbjct: 177 TDIYRKMDELGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLLMSS 236
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
AA + + + +++ ME ++ V L W+ Y+T AS YV A + ++A + L+K E L+
Sbjct: 237 YAALNKIDTVGEVLKEME-EKKVALGWSAYSTLASLYVNANMVEEAESALKKLESLIDVQ 295
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKI 350
+ +DF+++ YA+ GN +V RVW K N KV N Y+ ++ +L K + + ++I
Sbjct: 296 AGRQPFDFLMSLYASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDDRMKQI 355
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+E+WES +D R+ N + A+ R GL +AE L K + +G E + +T L Y+
Sbjct: 356 YEDWESNYENYDARLTNMMTRAHLRNGLTKEAELLWEKVKEKGAEFDSKTCELFLEHYM- 414
Query: 411 NNQSEKGVEAMKKALVLLEAGTRW-----KPSKECLAACLGYYKKERDIEGADYFIKLLT 465
G M AL +E T+ K +E ++ L Y+++ +D+EGA+ F+ L
Sbjct: 415 ------GKGDMTSALNWVENMTKLPRKKSKLDQEKISCFLKYFEEHKDVEGAERFLNCLR 468
Query: 466 GKEIISADLQDRLL 479
I + LL
Sbjct: 469 TSGCIDGKAYESLL 482
>gi|125525544|gb|EAY73658.1| hypothetical protein OsI_01545 [Oryza sativa Indica Group]
Length = 522
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 145/434 (33%), Positives = 237/434 (54%), Gaps = 15/434 (3%)
Query: 53 LYRMLSPMGDPNDSMVP-LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTK 111
LYR LS +G + V ++++WV EGR L +K+ R YKR +HAL++ WM
Sbjct: 57 LYRRLSALGGAGEGSVSRVMNKWVREGREARAADLAKYVKELRKYKRHAHALELMEWMVN 116
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
++ + AIRLDLI KV+GIE A YF +P+ K Y ALLN Y AK +KA
Sbjct: 117 TKGMNMSYTNHAIRLDLIYKVRGIEAAELYFAGLPDPGKNHKTYGALLNCYCSAKMEDKA 176
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
I ++M + G+ T+ N++M++Y + G ++K+ SL EM+ K + D T +L+S+
Sbjct: 177 TDIYRKMDELGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLLMSS 236
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
AA + + + +++ ME ++ V L W+ Y+T AS YV A + ++A + L+K E L+
Sbjct: 237 YAALNKIDTVGEVLKEME-EKKVALGWSAYSTLASLYVNANMVEEAESALKKLESLIDVQ 295
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKI 350
+ +DF+++ YA+ GN +V RVW K N KV N Y+ ++ +L K + + ++I
Sbjct: 296 AGRQPFDFLMSLYASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDDRMKQI 355
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+E+WES +D R+ N + A+ R GL +AE L K + +G E + +T L Y+
Sbjct: 356 YEDWESNYENYDARLTNMMTRAHLRNGLTKEAELLWEKVKEKGAEFDSKTCELFLEHYM- 414
Query: 411 NNQSEKGVEAMKKALVLLEAGTRW-----KPSKECLAACLGYYKKERDIEGADYFIKLLT 465
G M AL +E T+ K +E ++ L Y+++ +D+EGA+ F+ L
Sbjct: 415 ------GKGDMTSALNWVENMTKLPRKKSKLDQEKISCFLKYFEEHKDVEGAERFLNCLR 468
Query: 466 GKEIISADLQDRLL 479
I + LL
Sbjct: 469 TSGCIDGKAYESLL 482
>gi|255571041|ref|XP_002526471.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534146|gb|EEF35862.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/414 (32%), Positives = 224/414 (54%), Gaps = 4/414 (0%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMT-K 111
+YR +S M P +L++ ++G+ L +L ++K+ R YKR AL++ WM +
Sbjct: 71 VYRRISLMEKPELGAATVLNEMEKDGKKLTKWELCRVVKELRKYKRHKQALEVYDWMNNR 130
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
+ F L+ +D AI+LDL+AKV+G+ A YF + + +K VY ALLN+Y A+ EKA
Sbjct: 131 EERFRLSASDAAIQLDLVAKVRGVSSAEDYFMRLSDNVKDRRVYGALLNSYVKARMREKA 190
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E ++++MR + + +N MM +Y Y K+D ++ EM K I D Y+++I LS+
Sbjct: 191 ESLIEKMRKKDYTTHALPFNVMMTLYMNLKEYDKVDMMISEMMAKNIRLDIYSYNIWLSS 250
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
+ E ++++ M+ D + +WT ++T A+ Y+K G +KA LR+ E +
Sbjct: 251 RGSQGSIERMEEVYEQMKLDSTINPNWTTFSTMATMYIKMGQLEKAEDCLRRVESRIT-G 309
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKI 350
+ Y ++++ Y GNK+++ RVW YK + N GY +ISSL++ D +E AEKI
Sbjct: 310 RDRIPYHYLLSLYGNVGNKEEIYRVWNIYKSIFATIPNLGYHAIISSLVRMDDIEGAEKI 369
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+EEW +D RI N L+ Y R G L KAE+ G +PN TW ++A G+ +
Sbjct: 370 YEEWLPVKSSYDPRIGNLLMGWYVRGGNLDKAESFFDHMMEVGGKPNSSTWEILADGHTR 429
Query: 411 NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
+ + + K+A L + WKP +++ ++E D+ LL
Sbjct: 430 EKRISEALSCFKEAF-LAQGSKSWKPKPVIISSFFKLCEEEADMASTGVLEDLL 482
>gi|302142021|emb|CBI19224.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 210/368 (57%), Gaps = 4/368 (1%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S +L W+++G + LR + ++ KR HAL+I WM ++ F ++ AD
Sbjct: 50 PRRSATAVLQNWIDQGHKVTASDLRNVSRQLLKSKRHKHALEILAWMEAQNRFQMSAADH 109
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
AIRL+LI K+Q + +A YF +P + + LL+AY ++ EKAE +M ++ D G
Sbjct: 110 AIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAIEKAEALMLKLNDLG 169
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
L +N MM +Y T ++++ +++ +M++ I + ++++ +SAC+ S +
Sbjct: 170 LTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYNLWMSACSEVSGLASAE 229
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE-VLMMHNKFSRAYDFVI 301
+ M D+ V + W+ +T A+ Y+K+GL KA L+ +E L HN+ Y F+I
Sbjct: 230 MVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKANLALKNAEKKLSAHNRL--GYFFLI 287
Query: 302 TQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
T YA+ NK++VLR+W+ K+ ++ + Y+C++ L+K + AE+IF EWES+
Sbjct: 288 TMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAEAERIFREWESKCWK 347
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
+DIR+ N L+ AY R G + KAE+L RG PN +TW ++ G++++ +K + A
Sbjct: 348 YDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNYKTWEILMEGWMKSQNMDKAINA 407
Query: 421 MKKALVLL 428
MKK ++
Sbjct: 408 MKKGFSII 415
>gi|225450579|ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial [Vitis vinifera]
gi|296089781|emb|CBI39600.3| unnamed protein product [Vitis vinifera]
Length = 498
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 141/454 (31%), Positives = 244/454 (53%), Gaps = 16/454 (3%)
Query: 29 YSTATGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRI 88
+STAT T+ ++ SL Y LS + + LD+WV+EG+ + +
Sbjct: 20 FSTATATAAKDKEASL---------YWKLSALRGTEGDVAETLDKWVKEGKSVKRFDMIS 70
Query: 89 IIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEK 148
+ + R +K++ HA QI WM K N L AD AIR+DL+AK +GI QA +YFN + E
Sbjct: 71 CVNQLRRFKKYKHAAQIYEWMEKSKN-DLNNADRAIRIDLLAKTEGIAQAENYFNSLQES 129
Query: 149 LKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
K Y ALLN Y +KA + +++++ V + YN+M+++Y + G +K+ S
Sbjct: 130 AKTNKTYGALLNCYCKENMLDKAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPS 189
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
L+HEMEEK I D YT+++L+++ A+ D E +++++ M+ RGV DW Y A+ Y
Sbjct: 190 LVHEMEEKDIPADLYTYNLLMNSYASVKDFEAVEQVLDKMKK-RGVERDWFTYGNLANIY 248
Query: 269 VKAGLSDKALAVLRKSEV-LMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKV 326
V AG + KA L+K E +H+ A+ +I YA N + V R W+ K + K+
Sbjct: 249 VDAGHTKKANYALQKLEQNKNLHD--PEAFRMLINLYARTSNLEGVNRAWESLKLAHPKI 306
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
N+ Y+ ++ +L K + EK F+EWES +D+R+ N ++++Y R ++ +A L
Sbjct: 307 NNKSYLIMLLALSKLGDVAGLEKCFKEWESGCSTYDVRLSNVMLESYLNREIIEEANLLS 366
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA-GTRWKPSKECLAACL 445
RG E ++T L YL+ +Q + ++ + + +W P++E + L
Sbjct: 367 ESIAKRGPELKLKTLDLFMKFYLKKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFL 426
Query: 446 GYYKKERDIEGADYFIKLLTGKEIISADLQDRLL 479
Y+++ +D++ A+ F + + + + + D LL
Sbjct: 427 EYFEEVKDVDSAEKFCETMRKISRLDSKIYDSLL 460
>gi|326502008|dbj|BAK06496.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 142/434 (32%), Positives = 238/434 (54%), Gaps = 15/434 (3%)
Query: 53 LYRMLSPMGDPND-SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTK 111
LYR LS +G+ + S+ +L++W+ EGR L +K+ R YKR S AL++ WM
Sbjct: 86 LYRRLSALGNAGEGSVSAVLNKWLREGRETRSVDLERYVKELRRYKRHSQALELMDWMVH 145
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
++ + AIRLDLI KV+G+E A YF +P+ K + ALLN Y +K EKA
Sbjct: 146 TKGMNMSYTNHAIRLDLIYKVRGLEAAEKYFEGLPDPAKNHRTFGALLNCYCSSKEEEKA 205
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
+ ++M + G+ T+ N++M++Y + G +KK+ SL EM+EK + D T IL+++
Sbjct: 206 TDLYRKMDELGISSSTLPINNLMSLYMKLGQHKKVCSLFEEMKEKNVKPDNLTCCILMTS 265
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
AA + + +++++ ME G VL W+ Y+T AS Y AGL +KA + L+K E L+
Sbjct: 266 LAALNKIDDVEQVLKEMEEKDG-VLGWSAYSTLASIYQSAGLVEKAESALKKLEGLVQDR 324
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKI 350
+ +DF+++ YA+ GN +V RVW K KV N Y ++ +LLK + + +++
Sbjct: 325 DGRQPFDFLMSLYASVGNLSEVKRVWGVVKATFPKVTNTSYFSMLQALLKLNDADYMKQV 384
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
FEEWES + +D ++ N + A+ + G+ +AE L KA+ +G + +T L Y+
Sbjct: 385 FEEWESNHEFYDAKLTNVMTRAHLKNGMAKEAELLWEKAKEKGACFDSKTCELFLDHYMV 444
Query: 411 NNQSEKGVEAMKKALVLLEAGTRW-----KPSKECLAACLGYYKKERDIEGADYFIKLLT 465
MK AL +E T+ K ++ + Y+++++D++GA+ F + L
Sbjct: 445 AGD-------MKSALNWVENVTKLPKKTAKLDQDKIPKFSKYFEEQKDVQGAERFCRCLR 497
Query: 466 GKEIISADLQDRLL 479
I + LL
Sbjct: 498 ALGCIDGKAYESLL 511
>gi|193806501|sp|Q9C7F1.2|PPR61_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g28020
Length = 566
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 131/368 (35%), Positives = 203/368 (55%), Gaps = 19/368 (5%)
Query: 21 NVLDSSSSYSTATGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRP 80
NV+ S S+ G+ +T +L + N ++P+L+QW ++G
Sbjct: 23 NVITVSMSWLKIHGSCPHRITDALHR-----------------NAQIIPVLEQWRQQGNQ 65
Query: 81 LDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAAS 140
++ +R+IIKK R + ALQ+S WM+K+ L P D A RL LI V G+E+A
Sbjct: 66 VNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARLHLIENVVGLEEAEK 125
Query: 141 YFNCVPEKLKLPSVYIALLNAYACA-KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQ 199
+F +P+ + SVY +LLN+YA + K+ KAE Q+MRD GL+ + + YN+MM++Y
Sbjct: 126 FFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRPVPYNAMMSLYSA 185
Query: 200 TGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWT 259
N +K++ L+ EM++ ++ D T + +L +A D ++K + E G+ L+W
Sbjct: 186 LKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKWEGIHGIKLEWH 245
Query: 260 VYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR 319
A Y++A S KA+ +LR +E L+ AYD ++ Y GN+++VLRVWK
Sbjct: 246 TTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEAGNREEVLRVWKL 305
Query: 320 YKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
YK + + N GY VI SLLK D + AE+I++ WES L D RIP L Y RG+
Sbjct: 306 YKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRIPTMLASGYRDRGM 365
Query: 379 LHKAETLI 386
KAE L+
Sbjct: 366 TEKAEKLM 373
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 36/214 (16%)
Query: 64 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA 123
N + PLL+QW ++ +P D L+ +IK R K+FS ALQ+S WM +K L D A
Sbjct: 384 NKPVTPLLEQWGDQMKPSD---LKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYA 440
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
RL L V G+E+A YF +PE +K SVY+ALL++YA + D+ L
Sbjct: 441 ARLYLTENVLGLEEAEKYFENIPENMKDYSVYVALLSSYAKS--------------DKNL 486
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
GN +D ++ EMEE +D D T + +L AA S + ++
Sbjct: 487 -----------------GNM--VDEILREMEENNVDPDLITVNHVLKVYAAESKIQAMEM 527
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
+ + G+ L+ A YVKAGL+ K+
Sbjct: 528 FMRRWGTEDGIKLERGTMIAMAKAYVKAGLTKKS 561
>gi|15217811|ref|NP_174123.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322989|gb|AAG51479.1|AC069471_10 hypothetical protein [Arabidopsis thaliana]
gi|332192782|gb|AEE30903.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/368 (35%), Positives = 203/368 (55%), Gaps = 19/368 (5%)
Query: 21 NVLDSSSSYSTATGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRP 80
NV+ S S+ G+ +T +L + N ++P+L+QW ++G
Sbjct: 23 NVITVSMSWLKIHGSCPHRITDALHR-----------------NAQIIPVLEQWRQQGNQ 65
Query: 81 LDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAAS 140
++ +R+IIKK R + ALQ+S WM+K+ L P D A RL LI V G+E+A
Sbjct: 66 VNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARLHLIENVVGLEEAEK 125
Query: 141 YFNCVPEKLKLPSVYIALLNAYACA-KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQ 199
+F +P+ + SVY +LLN+YA + K+ KAE Q+MRD GL+ + + YN+MM++Y
Sbjct: 126 FFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRPVPYNAMMSLYSA 185
Query: 200 TGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWT 259
N +K++ L+ EM++ ++ D T + +L +A D ++K + E G+ L+W
Sbjct: 186 LKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKWEGIHGIKLEWH 245
Query: 260 VYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR 319
A Y++A S KA+ +LR +E L+ AYD ++ Y GN+++VLRVWK
Sbjct: 246 TTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEAGNREEVLRVWKL 305
Query: 320 YKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
YK + + N GY VI SLLK D + AE+I++ WES L D RIP L Y RG+
Sbjct: 306 YKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRIPTMLASGYRDRGM 365
Query: 379 LHKAETLI 386
KAE L+
Sbjct: 366 TEKAEKLM 373
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 135/302 (44%), Gaps = 78/302 (25%)
Query: 64 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA 123
N + PLL+QW ++ +P D L+ +IK R K+FS ALQ+S WM +K L D A
Sbjct: 384 NKPVTPLLEQWGDQMKPSD---LKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYA 440
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
RL L V G+E+A YF +PE +K SVY+ALL++YA + D+ L
Sbjct: 441 ARLYLTENVLGLEEAEKYFENIPENMKDYSVYVALLSSYAKS--------------DKNL 486
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
GN +D ++ EMEE +D D T + +L AA S K
Sbjct: 487 -----------------GNM--VDEILREMEENNVDPDLITVNHVLKVYAAES------K 521
Query: 244 IVAM-MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
I AM M R V VY A K EV HN + +
Sbjct: 522 IQAMEMFMRRWAV---EVYGDVARC---------------KREV---HNLWDECKN---- 556
Query: 303 QYAACGNKDDVLRVWKR----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
NK++ + K+ LK+ + GY VISSLLK D ++ EK++ EW+ +
Sbjct: 557 ------NKEEEVEDGKKRLPVVTTLLKMDDDGYRTVISSLLKLDDVQGVEKVYGEWKPKA 610
Query: 359 LC 360
C
Sbjct: 611 GC 612
>gi|395146485|gb|AFN53641.1| pentatricopeptide repeat-containing protein [Linum usitatissimum]
Length = 516
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/458 (31%), Positives = 240/458 (52%), Gaps = 15/458 (3%)
Query: 19 LGNVLDSSSSYSTATGTSTREVTISL---RKGSSMYKLYRMLSPMGDPNDSMVPLLDQWV 75
+GN STAT S S R + +LYR LS +G ++ +L+ +V
Sbjct: 9 IGNGRCPRRQLSTATEASASAPDPSYKEQRSSGNPLRLYRRLSALGATGGTVDKVLNDYV 68
Query: 76 EEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGI 135
+G + +L +K+ R Y RF+H L+I WM K+ L D+A+RLDLI K +GI
Sbjct: 69 MDGMSIRKVELMRCVKELRKYGRFNHGLEIMEWMEKRG-INLGHGDLAVRLDLICKTKGI 127
Query: 136 EQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMN 195
+A +YFN + K P+ Y +LLN+Y +EKA + Q+M + ++ +N++M+
Sbjct: 128 TEAENYFNGLVPSAKNPATYGSLLNSYCKKLDSEKALQLFQKMDKLKFFRNSLPFNNLMS 187
Query: 196 VYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD--RG 253
+Y + G +K+ L+ +M++ + +T++I + + D EGI K++ M D G
Sbjct: 188 MYMRLGQQEKVPELVSQMKQMNLPPCTFTYNIWIQSLGHMRDFEGIKKVLEEMRNDVNFG 247
Query: 254 VVLDWTVYATAASGYVKAGLSDKA-LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD 312
+WT Y+ A+ Y AG ++A LA+ E + H++ AY F++T Y + ++
Sbjct: 248 NNFNWTTYSNLAAVYTSAGEFERAKLALKMMEERIDSHDR--NAYHFLLTLYGGIADLEE 305
Query: 313 VLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
V RVW K +V N Y+ ++ +L + +E K+FEEWES +D+R+ N I
Sbjct: 306 VHRVWGCLKAKFNQVTNASYLVMLQALARLKDVEGISKVFEEWESVCTSYDMRVANVAIR 365
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLL--- 428
Y +G+ ++AE + A R P +T ++ L+ Q E ++ MK A +
Sbjct: 366 VYLEKGMYNEAEAVFDGAMERTPGPYFKTREMLMVSLLKRRQLEPALKQMKAAFTEVGQN 425
Query: 429 EAG--TRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
E G W+PS E + A GY+++E+D+EGA+ K+L
Sbjct: 426 EKGHEKEWRPSAEIVNAFFGYFEEEKDVEGAEKMWKIL 463
>gi|356526773|ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Glycine max]
Length = 490
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 213/379 (56%), Gaps = 8/379 (2%)
Query: 90 IKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKL 149
+KK R K + AL++S M K+ N + T +D AI LDL+AK +GI A +YF +PE
Sbjct: 62 LKKLRDRKLYQPALKLSETMAKR-NMIKTVSDHAIHLDLLAKARGITAAENYFVSLPEPS 120
Query: 150 KLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
K Y ALLN Y EK+E +M++M++ L ++ YNS+M +Y + G +K+ SL
Sbjct: 121 KNHLCYGALLNCYCKELMTEKSEGLMEKMKELSLPLSSMPYNSLMTLYTKVGQPEKIPSL 180
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+ EM+ + D YT+++ + A AA +D G++++ M+ V DWT Y+ AS +V
Sbjct: 181 IQEMKASNVMLDSYTYNVWMRALAAVNDISGVERVHDEMKRGGQVTGDWTTYSNLASIFV 240
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFS--RAYDFVITQYAACGNKDDVLRVWKRYKQNL-KV 326
AGL DKA L++ E N F AY F+IT Y GN +V RVW+ + K
Sbjct: 241 DAGLFDKAEVALKELE---KRNAFKDLTAYQFLITLYGRTGNLYEVYRVWRSLRLAFPKT 297
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
N Y+ +I L+ + AEK F EWE +DIR+ N LI AY + +L KAE L
Sbjct: 298 ANISYLNMIQVLVNLKDLPGAEKCFREWECGCPTYDIRVANVLIRAYVKLDMLEKAEELK 357
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA-GTRWKPSKECLAACL 445
+A+ RG +PN +T + YL + V+ + +A+ + G +W PS ++ +
Sbjct: 358 ERARRRGAKPNAKTLEIFMDYYLLKGDFKLAVDYLNEAISMGRGNGEKWVPSSRIISIMM 417
Query: 446 GYYKKERDIEGADYFIKLL 464
++++E+D++GA+ F+++L
Sbjct: 418 RHFEQEKDVDGAEEFLEIL 436
>gi|224119780|ref|XP_002331159.1| predicted protein [Populus trichocarpa]
gi|118487894|gb|ABK95769.1| unknown [Populus trichocarpa]
gi|222873242|gb|EEF10373.1| predicted protein [Populus trichocarpa]
Length = 490
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/429 (32%), Positives = 236/429 (55%), Gaps = 7/429 (1%)
Query: 41 TISLRKGSSMY---KLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYK 97
T S+ K S Y LY L G S+ L+Q+++ + + ++ IKK R
Sbjct: 10 TKSVTKRSKKYLEEALYVRLFKEGSSEVSVRQQLNQFLKSSKRVFKWEVGDTIKKLRSRN 69
Query: 98 RFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIA 157
+ A+++S M+ + T +D AI LDL+AK +GI A +YF +PE K Y A
Sbjct: 70 LYYPAVKLSETMSSRG-MNKTVSDQAIHLDLVAKTRGIPAAENYFIDLPETSKNLRTYGA 128
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
LLN Y E+AE ++++M++ L ++ YNS+M +Y + G +++ +++ EM+
Sbjct: 129 LLNCYCKELMTEEAEALIEKMKELNLGLSSMSYNSLMTLYTKVGQPERIPAIIQEMKADN 188
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
+ D YT+++ + A AA +D G+++++ M+ D V +WT Y+ AS YV AG DKA
Sbjct: 189 VMPDSYTYNVWMRALAAVNDISGVERVIEEMKRDGRVAANWTTYSNLASIYVDAGYFDKA 248
Query: 278 LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVIS 336
L++ E + NK A+ F+IT Y G +V R+W+ + K N Y+ +I
Sbjct: 249 EKALKELEKI-NANKDLFAFQFLITLYGRTGKLIEVYRIWRSLRLAFPKTANISYLNMIQ 307
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
L+ + AEK F EWES +DIR+ N +I AY + GL+ KAE L +A+ RG +P
Sbjct: 308 VLVNLKDVPGAEKCFREWESGCSTYDIRVANVVISAYAKEGLVDKAEELKERARRRGAKP 367
Query: 397 NVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA-GTRWKPSKECLAACLGYYKKERDIE 455
N +TW + YL+N + GV+ + A+ G +W PS + + + ++++++D++
Sbjct: 368 NSKTWEIFCDYYLKNGDVKLGVDCIANAVSAGRGNGQKWVPSPVIVGSLMAHFEQQKDVD 427
Query: 456 GADYFIKLL 464
GA+ I++L
Sbjct: 428 GAEDLIEIL 436
>gi|147819856|emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
Length = 494
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 135/430 (31%), Positives = 234/430 (54%), Gaps = 7/430 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY LS + + LD+WV+EG+ + + + + R +K++ HA QI WM K
Sbjct: 31 LYWKLSALRGTEGDVAETLDKWVKEGKSVKRFDMISCVNQLRRFKKYKHAAQIYEWMEKS 90
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
N L AD AIR+DL+AK +GI QA +YFN + E K Y ALLN Y +KA
Sbjct: 91 KN-DLNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKENMVDKAV 149
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+ +++++ V + YN+M+++Y + G +K+ SL+HEMEEK I D YT+++L+++
Sbjct: 150 ELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLLMNSY 209
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV-LMMHN 291
A+ D E +++++ M+ RGV DW Y A+ YV AG + KA L+K E +H+
Sbjct: 210 ASVKDFEAVEQVLEKMKK-RGVERDWFTYGNLANIYVDAGHTKKANYALQKLEQNKNLHD 268
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKI 350
A+ +I YA N + V R W+ K + K+ N+ Y+ ++ +L K + EK
Sbjct: 269 --PEAFRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGLEKC 326
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
F+EWES +D+R+ N ++++Y R ++ +A L RG E ++T L YL+
Sbjct: 327 FKEWESGCSTYDVRLSNVMLESYLNREMIEEANLLSESIAKRGPELKLKTLDLFMKFYLK 386
Query: 411 NNQSEKGVEAMKKALVLLEA-GTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEI 469
+Q + ++ + + +W P++E + L Y+++ +D++ A+ F + +
Sbjct: 387 KHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDSAEKFCETMRKISR 446
Query: 470 ISADLQDRLL 479
+ + + D LL
Sbjct: 447 LDSKIYDSLL 456
>gi|297851240|ref|XP_002893501.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339343|gb|EFH69760.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 667
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 123/336 (36%), Positives = 193/336 (57%), Gaps = 2/336 (0%)
Query: 64 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA 123
N ++P+L+QW ++G ++ +R+IIKK R + ALQ+S WM+K+ L P D A
Sbjct: 41 NAQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFA 100
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACA-KSAEKAEIIMQQMRDRG 182
RL LI V G+E+A +F +P+ + SVY LLN YA + K+ KAE Q+MR+ G
Sbjct: 101 ARLHLIENVVGLEEAEKFFESIPKNARDDSVYTTLLNWYARSDKTLCKAEATFQKMRELG 160
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
L+ + YN+MM++Y + +K++ L+ EM++ ++ D T + +L +A D ++
Sbjct: 161 LLSRPSPYNAMMSLYIALNDREKVEELLREMKDNDVEADSITVNNVLKLYSAVCDVTAME 220
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
K + E G+ L+W A Y++A + KA+ +LR +E L AYD ++
Sbjct: 221 KFLNKWEGINGIKLEWLTTLDMAKAYLRARSNGKAIKMLRLTEELADRKSLKSAYDHLMK 280
Query: 303 QYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
Y GN+++VLR+W YK N+ + N+GY VI SLLK D + AE+I++ WES +L
Sbjct: 281 LYGEAGNREEVLRIWNLYKMNIGQRDNKGYRTVIRSLLKVDDIFGAEEIYKVWESLSLEF 340
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
DIRIP L Y RG+ KAE LI ++ + N
Sbjct: 341 DIRIPTMLASGYRERGMTEKAEKLINSKTIKDRKMN 376
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 131/294 (44%), Gaps = 68/294 (23%)
Query: 64 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA 123
N + PLL+QW ++ +P D L+ +IK R +FS ALQ+S WM +K L D A
Sbjct: 376 NKPVTPLLEQWGDQMKPSD---LKCLIKNLRDSNQFSKALQVSEWMGEKRVCDLYSEDYA 432
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
RL L V G+E+A YF +PE +K SVY+ALL++Y AKS + E ++++
Sbjct: 433 ARLYLTENVLGLEKAEKYFENIPENMKDYSVYVALLSSY--AKSDKNLENMVEE------ 484
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
++ EMEE +D D T + +L AAAS E ++
Sbjct: 485 -------------------------ILREMEENNVDPDSITVNYVLKVYAAASKVEAMEM 519
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ 303
+ +A G V AG K EV + + + +
Sbjct: 520 FMRH-------------WAVEMYGNV-AGC---------KREVHNLWEECKNKKEEKVGD 556
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
C N L LK+ + GY VISSLLK D ++ AEK++ EW+ +
Sbjct: 557 GKECLNVVSTL---------LKMDDDGYRTVISSLLKLDDVQGAEKVYGEWKPK 601
>gi|449434959|ref|XP_004135263.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Cucumis sativus]
gi|449478594|ref|XP_004155363.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Cucumis sativus]
Length = 489
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 135/413 (32%), Positives = 228/413 (55%), Gaps = 5/413 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY L G S+ L+++++ + + ++ ++K R K + AL++S M K+
Sbjct: 27 LYIRLFKDGGSEKSVRLQLNKFIKSHKRVFKWEVGDTLRKLRDRKLYYPALKLSEIMAKR 86
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
T +D AI LDL+AK +GI+ A +YF +PE K Y +LLN Y EKAE
Sbjct: 87 -GMNKTVSDQAIHLDLVAKARGIDAAENYFVSLPESSKNHLSYSSLLNCYCKELLTEKAE 145
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+ +++++ L + YNS+M +Y + G K+ +++ EM+ + D YT+ + + A
Sbjct: 146 ALFEKIKELNLPVTPVPYNSLMTLYSKIGRPDKVCTIIQEMKAANVTFDPYTYIVWMRAL 205
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
AA +D G+++++ M+ D GV DWT Y+ AS YV A + +KA L+ E +
Sbjct: 206 AALNDISGVERVIDEMKRD-GVKGDWTTYSNLASIYVNANMFEKAAKALKDLEKINTRRD 264
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIF 351
+ F+IT Y G+ +V RVW+ + + N Y+ +I +L K + AEK F
Sbjct: 265 LI-GFQFLITLYGQIGDLTEVYRVWRSLRLAFPRTANISYLNMIQTLTKLKDLPGAEKCF 323
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
+EWES + +DIRIPN LI AY + GLL KA L +A RG PN +TW YL+N
Sbjct: 324 KEWESGSPTYDIRIPNALIGAYTKGGLLEKAMALKERALRRGARPNAKTWEFFLNYYLKN 383
Query: 412 NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
+ + + KA+ + G +W PS E + + + ++++E+D++GA+ F++++
Sbjct: 384 GDFKLAGDCVAKAIGKGDRG-KWIPSPEIIKSFMSHFEQEKDVDGAESFLEIV 435
>gi|224085447|ref|XP_002307578.1| predicted protein [Populus trichocarpa]
gi|222857027|gb|EEE94574.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 225/416 (54%), Gaps = 9/416 (2%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S V + +W EEG + +L I+++ R KR+ HAL++ WMTK+S+ L P D A+
Sbjct: 55 SAVITIRKWKEEGHNVRKYELNRIVRELRKLKRYKHALEVCEWMTKQSDIKLVPGDYAVH 114
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
LDLIAK++G+ A +F +P+K++ ALL+ Y KS KAE +M++M + G +K
Sbjct: 115 LDLIAKIRGLNSAEKFFEDIPDKMRDYQACSALLHVYVQNKSISKAEALMEKMSECGFLK 174
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
+ YN M++VY G +K+ ++ E+++K D T+++ L+ACA+ +D E +K+
Sbjct: 175 NALPYNHMLSVYVANGQLEKVAEIIQELKKK-TSPDVVTYNMWLTACASQNDVETAEKVF 233
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVITQY 304
++ + + DW Y+T + Y+K +KA L+ EV +K +R Y +++ +
Sbjct: 234 MELKKSK-LDPDWVTYSTLTNLYIKKECLEKAAYTLK--EVEKRASKKNRVTYSSLLSLH 290
Query: 305 AACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
A +KD + R W + K K+ + Y C+ISSL+K AE ++ EWES + D
Sbjct: 291 ANMKDKDGLHRTWNKMKSVFNKMNDAEYNCMISSLVKLGEFGGAENLYNEWESVSATRDS 350
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
R+ N ++ +Y R + AE + +G P TW L+ G+L+ Q EK +E KK
Sbjct: 351 RVSNIVLASYINRNQMEDAENFCQRMVQKGITPCYTTWELLTCGHLKTEQMEKVLENFKK 410
Query: 424 ALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLL 479
AL + +W P K + ++ DIEGA+ + +L +S + + LL
Sbjct: 411 ALCSVR---KWTPDKRLIGDIFKNLEERGDIEGAEKLLVILRDAGHVSTMIYNSLL 463
>gi|359490027|ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 230/419 (54%), Gaps = 15/419 (3%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S V + +W EEG + +L I+++ R KR+ HAL+I WMTK+ + L D A+
Sbjct: 184 SAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVH 243
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
LDLIAK++G+ A +F + +K+K ALL+ Y K +EKAE +M++M + G +K
Sbjct: 244 LDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLK 303
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
+ YN M+++Y G +K+ ++ E+ +K D T+++ L+ CA+ +D E +K++
Sbjct: 304 CPLPYNHMISLYISDGQLEKVPGMIQEL-KKNTSPDVVTYNLWLTVCASQNDVETAEKVL 362
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYDFVI 301
++ + + DW Y++ + Y+K GL DKA L + M + SR AY +I
Sbjct: 363 LEIKKAK-IDPDWVTYSSLTNLYIKKGLLDKAATTLNE-----MEKRTSRKGRIAYSSLI 416
Query: 302 TQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
+ + +KD V R+WK+ K K+ + Y C+ISSL+K E AE ++ EW S +
Sbjct: 417 SLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSVSPT 476
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
D R+PN L+ AY + + AE + RG P+ TW L+ GYL+ Q EK ++
Sbjct: 477 GDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKVLDY 536
Query: 421 MKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLL 479
+KA+ ++ +W P ++ + +++ +IEGA+ + +L +S ++ + LL
Sbjct: 537 FEKAVGSVK---KWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGHVSTEIYNWLL 592
>gi|226533322|ref|NP_001142217.1| uncharacterized protein LOC100274385 [Zea mays]
gi|194707648|gb|ACF87908.1| unknown [Zea mays]
gi|414870857|tpg|DAA49414.1| TPA: hypothetical protein ZEAMMB73_857299 [Zea mays]
Length = 472
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 210/384 (54%), Gaps = 6/384 (1%)
Query: 104 QISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYA 163
Q+S WMT + + L+ DVA RLDLI+KV G+E+A YF VP++L+ P Y +LL Y
Sbjct: 48 QLSFWMTDRRHLHLSVGDVAYRLDLISKVHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYV 107
Query: 164 CAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKY 223
AK+ +KAE +M++ G+ + Y MM +Y QTG +++ ++ +MEEKG+ D +
Sbjct: 108 EAKAVDKAEEHFAKMQEMGMT-SSYAYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTF 166
Query: 224 TFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
+ +L+A AA D +G+ K++ +V W +A+AAS ++K+G+ A+ L +
Sbjct: 167 SVEAMLAAYIAAEDVQGVGKVLDKANPHEKLV-TWHGHASAASLFMKSGMQVGAVMALVE 225
Query: 284 SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDG 343
+E + AY F++ Y G + R+W YK + N Y+ +S+LL+ +
Sbjct: 226 AERRISPKSSRIAYAFLLKTYTELGMHAEAGRIWSVYKSKVPPCNTMYMSRLSALLRTND 285
Query: 344 MESAEKIFEEWESRNL-CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
++ AE +EWE+ L HD R+ N ++DAYCR GL+ KA L+ A +G P TWY
Sbjct: 286 IDGAEATLKEWETVPLRYHDFRLINVMVDAYCREGLVEKAVALVDGAIKKGRTPYANTWY 345
Query: 403 LMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIK 462
+A G+ + Q + V+ +KAL A W+P + L ++ ++D+ A+ +
Sbjct: 346 KLAGGFFKTGQVPEAVDMTRKALD--SATPPWRPDLANVLMSLNHFVDQKDVGAAEEMVS 403
Query: 463 LLTGKEIISADLQDRLLNN-IRNG 485
L ++ D+ LL +R G
Sbjct: 404 TLQKLVPLTRDVYHCLLKTYVRAG 427
>gi|297737393|emb|CBI26594.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 230/419 (54%), Gaps = 15/419 (3%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S V + +W EEG + +L I+++ R KR+ HAL+I WMTK+ + L D A+
Sbjct: 71 SAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVH 130
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
LDLIAK++G+ A +F + +K+K ALL+ Y K +EKAE +M++M + G +K
Sbjct: 131 LDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLK 190
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
+ YN M+++Y G +K+ ++ E+ +K D T+++ L+ CA+ +D E +K++
Sbjct: 191 CPLPYNHMISLYISDGQLEKVPGMIQEL-KKNTSPDVVTYNLWLTVCASQNDVETAEKVL 249
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYDFVI 301
++ + + DW Y++ + Y+K GL DKA L + M + SR AY +I
Sbjct: 250 LEIKKAK-IDPDWVTYSSLTNLYIKKGLLDKAATTLNE-----MEKRTSRKGRIAYSSLI 303
Query: 302 TQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
+ + +KD V R+WK+ K K+ + Y C+ISSL+K E AE ++ EW S +
Sbjct: 304 SLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSVSPT 363
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
D R+PN L+ AY + + AE + RG P+ TW L+ GYL+ Q EK ++
Sbjct: 364 GDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKVLDY 423
Query: 421 MKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLL 479
+KA+ ++ +W P ++ + +++ +IEGA+ + +L +S ++ + LL
Sbjct: 424 FEKAVGSVK---KWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGHVSTEIYNWLL 479
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 230/419 (54%), Gaps = 15/419 (3%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S V + +W EEG + +L I+++ R KR+ HAL+I WMTK+ + L D A+
Sbjct: 71 SAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVH 130
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
LDLIAK++G+ A +F + +K+K ALL+ Y K +EKAE +M++M + G +K
Sbjct: 131 LDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLK 190
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
+ YN M+++Y G +K+ ++ E+ +K D T+++ L+ CA+ +D E +K++
Sbjct: 191 CPLPYNHMISLYISDGQLEKVPGMIQEL-KKNTSPDVVTYNLWLTVCASQNDVETAEKVL 249
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYDFVI 301
++ + + DW Y++ + Y+K GL DKA L + M + SR AY +I
Sbjct: 250 LEIKKAK-IDPDWVTYSSLTNLYIKKGLLDKAATTLNE-----MEKRTSRKGRIAYSSLI 303
Query: 302 TQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
+ + +KD V R+WK+ K K+ + Y C+ISSL+K E AE ++ EW S +
Sbjct: 304 SLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSVSPT 363
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
D R+PN L+ AY + + AE + RG P+ TW L+ GYL+ Q EK ++
Sbjct: 364 GDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKVLDY 423
Query: 421 MKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLL 479
+KA+ ++ +W P ++ + +++ +IEGA+ + +L +S ++ + LL
Sbjct: 424 FEKAVGSVK---KWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGHVSTEIYNWLL 479
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 5/129 (3%)
Query: 296 AYDFVITQYAACGNKDDVLRVW-KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
++ +I+ YA CG+ + L ++ K ++LK + + V+S+ +E EK+
Sbjct: 836 TWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVXVLSACSHLASLEEGEKVHNYI 895
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
++ I LID Y + G L K+ + E +V TW +M +GY + +
Sbjct: 896 NGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMH----ERDVITWNVMISGYGMHGDA 951
Query: 415 EKGVEAMKK 423
+E ++
Sbjct: 952 RSAIEXFQQ 960
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
+A ++ E+ +Y N + L S+ AL++ YA EK+ I M +R + I
Sbjct: 882 LASLEEGEKVHNYINGGKFEFNL-SIATALIDMYAKCGQLEKSREIFNSMHERDV----I 936
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAA 235
+N M++ Y G+ + +MEE + TF +LSACA A
Sbjct: 937 TWNVMISGYGMHGDARSAIEXFQQMEESSAKPNGLTFLAVLSACAHA 983
>gi|356518447|ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 496
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/421 (31%), Positives = 229/421 (54%), Gaps = 13/421 (3%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S +P L WV++G + QLR I + KR+ HAL++ W+ + NF + PAD A++
Sbjct: 45 SPLPALQNWVDQGNDVSPFQLRSIARTLVKSKRYHHALEVFEWIKNQKNFHMIPADHAMK 104
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
L+LI + G+ +A YF +P+ + + LL Y + KAE M ++ + GLV
Sbjct: 105 LELIIENHGLMEAEEYFMNLPDSAAKKAACLILLRGYVRDRDTSKAETFMLKLYELGLVV 164
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG----- 240
+N MM +Y T Y+K+ ++ +M+ I C+ ++++ ++AC S+ EG
Sbjct: 165 SPHPFNEMMKLYLVTCEYRKVPLVIQQMKRNKIPCNVLSYNLWMNAC---SEEEGYVVAA 221
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE-VLMMHNKFSRAYDF 299
++ + M DR V + W AT A+ Y KAG S KA+ VL+ +E L N+ + F
Sbjct: 222 VETVFRQMLNDRNVEVGWGSLATLANAYKKAGQSKKAILVLKDAEKKLSTCNRL--GHFF 279
Query: 300 VITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
+IT YA+ +K+ VLR+W+ K ++ YIC+++ L+K + A++IF EWES
Sbjct: 280 LITLYASLKDKEGVLRLWEASKAVRGRISCANYICILTCLVKLGDIVQAKRIFLEWESNC 339
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
+DIR+ N L+ AY R GL+ +AE+L +G PN +T ++ GY+ + ++ +
Sbjct: 340 QKYDIRVSNVLLGAYVRNGLMEEAESLHLHTLQKGGCPNYKTLEILMEGYVNWQKMDEAI 399
Query: 419 EAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRL 478
MK+AL +++ W+P + A Y +K+ ++E AD +I + ++S L L
Sbjct: 400 ITMKRALAMMK-DCHWRPPHGIVLAIAEYLEKDGNLEYADKYITDIHNLGLVSLSLYKVL 458
Query: 479 L 479
L
Sbjct: 459 L 459
>gi|357142115|ref|XP_003572464.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 546
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 229/416 (55%), Gaps = 9/416 (2%)
Query: 52 KLYRMLS--PMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWM 109
+LY LS P P + LDQW+ E RPL +QL ++K R Y+ + AL++ WM
Sbjct: 84 RLYTRLSTLPPDAPLGCLAAELDQWLRERRPLSEQQLFSYVRKLRSYRHYKRALELMDWM 143
Query: 110 TKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAE 169
+ L A+RL L+ KV G+E A YF +PE K Y +LLN YA + A+
Sbjct: 144 EARGA-SLQLGHHAVRLGLVCKVNGLEAAEEYFWSLPEMFKSIKTYSSLLNCYAEHRKAD 202
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
K + ++M+ + T+ YN++M++Y +T +K+ + +M E + D +T+ +L
Sbjct: 203 KGLELFEKMKAMNITPSTLVYNNLMDLYLKTDQPEKIPTTFEQMRENHVRTDSFTYYMLT 262
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
+ +D + +K V +E + + W++Y A+ Y K DKA+ L+K+E +M
Sbjct: 263 QSYIMVNDLKSAEKFVEELE--KSTPVPWSLYTVLANNYNKLAQFDKAVLALKKAEEVMD 320
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAE 348
++ S A+ +++ YA+ GN +V RVW+ K K NR Y+ ++S+L K D +S +
Sbjct: 321 RSEIS-AWHNLLSLYASSGNSSEVKRVWESLKSAFTKCINRSYLVMLSALKKLDDFDSLQ 379
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
++F+EWES + +D+RI N +I+AY + + +AE L A +G NV T+Y+ Y
Sbjct: 380 QLFQEWESTHERYDMRITNVMIEAYLAKDMTDEAEALRQTAMAKG-HSNVTTFYIFVVSY 438
Query: 409 LQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
L+ +++ + ++ + A +++ W P KE + L ++++ +D++G + F + L
Sbjct: 439 LEKSRTSEALDIWRDAEKMVKTPN-WVPPKELVTRFLKHFEEAKDVDGMEAFWEHL 493
>gi|449457725|ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 227
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 144/197 (73%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LYR +SP+GDPN S+ PLLDQWV EGR + ++LR IIK+ R+YKRF HAL+IS WM+ K
Sbjct: 31 LYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMSDK 90
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
F L+ AD+AIR++LI +V G+EQ YF+ +P +LK V+IALLN YA K +KA
Sbjct: 91 RYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCVDKAN 150
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
MQ++++ G + YN MMN+Y+Q G +++LDSL+ EM+E+G+ D++T+SI +SA
Sbjct: 151 AFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSIRISAY 210
Query: 233 AAASDGEGIDKIVAMME 249
AAASD GI+KI+ ME
Sbjct: 211 AAASDFRGIEKIMEQME 227
>gi|297808773|ref|XP_002872270.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318107|gb|EFH48529.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/406 (31%), Positives = 225/406 (55%), Gaps = 9/406 (2%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S+ LL + ++ G + + +LR I K+ R+ ALQ+ WM + + D+
Sbjct: 47 PRRSVTSLLQERIDSGHAVALSELRFISKRLIRSNRYDLALQMIEWMENQKEIQFSVYDI 106
Query: 123 AIRLDLIAKVQGIEQAASYF----NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQM 178
++RL+LI K G++QA YF N S Y+ LL +Y K ++ E+ M+++
Sbjct: 107 SLRLELIIKTHGLKQAEEYFEKLLNSSASLRVAKSAYLPLLRSYVKKKMVKEGEVFMEKL 166
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG 238
G + +N MM +Y +G Y+K+ ++ M+ I + ++++ ++AC S
Sbjct: 167 NGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKVNKIPRNVLSYNLWMNACCQVSGV 226
Query: 239 EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AY 297
++ + M D+ V + W+ T A+ Y+K G +KA VL +E L+ N+ +R Y
Sbjct: 227 TAVETVYREMVGDKSVEVGWSSLCTLANVYIKGGFDEKAKLVLENAEKLL--NRSNRLGY 284
Query: 298 DFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWES 356
F+IT YA+ G+K+ V+R+W+ K ++ YICV+SSL+K +E AE++F EWE+
Sbjct: 285 FFLITLYASLGDKEGVVRLWEASKLVCGRISCANYICVLSSLVKIGDLEEAERVFNEWEA 344
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ +D+R+ N L+ AY R G + KAE+L + RG PN +TW ++ G+++ EK
Sbjct: 345 QCFNYDVRVSNVLLGAYMRNGEIRKAESLHARVLERGGNPNYKTWEILMEGWVKCQSMEK 404
Query: 417 GVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIK 462
+ AM +A L++ G W+PS+ + A Y+++E IE A+ +I+
Sbjct: 405 AIVAMHRAFELMK-GCHWRPSESIVMAIAKYFEEEEKIEEANTYIR 449
>gi|326533934|dbj|BAJ93740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 141/463 (30%), Positives = 242/463 (52%), Gaps = 22/463 (4%)
Query: 31 TATGTSTREVTISL--------RKGSSM----YKLYRMLS--PMGDPNDSMVPLLDQWVE 76
TAT + R V+ + R+G + LY+ LS P P + LD+W+
Sbjct: 4 TATAAALRRVSPAPAGSVHTPHRRGPELQAAWVPLYKRLSKLPPAAPLGCVAAELDRWLC 63
Query: 77 EGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIE 136
E +PL QL ++K R +++ AL++ WM + +L P D A+RLDLI V G+E
Sbjct: 64 ERKPLCGHQLLFYVRKLRNFRQHRRALELMDWMEARGANLL-PGDHALRLDLICTVNGLE 122
Query: 137 QAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNV 196
A YF +P+ K Y +LL+ YA K AEKA + ++MR +V T+ Y ++M++
Sbjct: 123 AAEEYFLSLPDMYKSVKTYSSLLHCYAEHK-AEKALELYEKMRTMNIVPNTLVYKNLMSL 181
Query: 197 YYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL 256
Y +TG +K+ EM G+ D +T+ +L + + E +K + +E + + +
Sbjct: 182 YLKTGQPEKILQTFEEMRANGVRTDNFTYYMLTESHIMLNGLESTEKFLEDLE--KSIPV 239
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV 316
W++Y A Y K G DKA L+K+E +M + A+ +++ YA+ GN +V RV
Sbjct: 240 HWSLYTRLADSYNKVGQFDKAGLTLKKAEEVMDRGEMF-AWHNLLSLYASSGNLSEVKRV 298
Query: 317 WKRYKQNLKVY-NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
W + LK+ NR Y+ ++S+L K D + +++F+EWE +D+RIPN +I AY
Sbjct: 299 WSSLRSELKISSNRSYLVMLSALKKLDDFDCMQQVFQEWELTQESYDMRIPNVMIKAYLA 358
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWK 435
+ + +AE L A +G N T+Y+ YL+ +++E +E + A +++ W
Sbjct: 359 KDMTDEAEALRQTAMAQG-HSNPLTFYIFTESYLEKSRTEAALEVWRDAGKMVKTPN-WA 416
Query: 436 PSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRL 478
P E + L ++++ +D++G + F L E + D +D L
Sbjct: 417 PPPELVKRFLKHFEEAKDVDGMESFCACLEKLECLDTDARDAL 459
>gi|115449217|ref|NP_001048388.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|47497029|dbj|BAD19082.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497238|dbj|BAD19283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537919|dbj|BAF10302.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|125584008|gb|EAZ24939.1| hypothetical protein OsJ_08720 [Oryza sativa Japonica Group]
Length = 517
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 203/382 (53%), Gaps = 3/382 (0%)
Query: 99 FSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIAL 158
+ AL+I WM ++F L+P+D +RLDLIAKV G QA Y+ + + L
Sbjct: 97 YEQALEILSWMDSHNDFRLSPSDHMVRLDLIAKVHGTSQAEEYYRKLSTAASKKAASFPL 156
Query: 159 LNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGI 218
L+ Y ++ +KAE M +++ GL +N +M +Y T Y+K+ S+++ M+ I
Sbjct: 157 LHCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNI 216
Query: 219 DCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKAL 278
+ +++I ++ACA S + M D V + W+ Y T A+ + K G S KAL
Sbjct: 217 PRNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKAL 276
Query: 279 AVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISS 337
A LR +E + + Y F++T YAA ++D V+R+W+ K ++ Y+ +
Sbjct: 277 ACLRTAET-KLSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVC 335
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
L+K + AE F WE+ + HD+R+ N L+ AY R G + KAE L +G PN
Sbjct: 336 LIKVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPN 395
Query: 398 VRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGA 457
+TW ++ G++Q+ Q +K V AMKK L LL+ W+P E L A Y++++ +E A
Sbjct: 396 YKTWEILMEGFVQSKQMDKAVNAMKKGLSLLKT-CHWRPPLELLEAIAKYFEEQGSVEDA 454
Query: 458 DYFIKLLTGKEIISADLQDRLL 479
D FIK+L + S L LL
Sbjct: 455 DRFIKVLQKFNLTSLPLYKSLL 476
>gi|147803609|emb|CAN75355.1| hypothetical protein VITISV_002476 [Vitis vinifera]
Length = 736
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 203/369 (55%), Gaps = 8/369 (2%)
Query: 99 FSHAL-QISMWMTKKSN-FVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI 156
F AL ++ WM + F L+ +D AI+LDLIAKV G+ A YF+ +P+ LK +Y
Sbjct: 314 FVEALYKVYEWMNNRGERFRLSSSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYG 373
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
ALLNAY AK +KAEI+++++R++G + +N MM +Y K+ S++ EM K
Sbjct: 374 ALLNAYVQAKMRDKAEILIEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNK 433
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
I D Y+++I LS+C + E ++++ M+ +R + +WT ++T A+ Y+K G +K
Sbjct: 434 NIQLDIYSYNIWLSSCEST---ERMEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEK 490
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVI 335
A L+K E + N+ Y ++I+ Y + GNK +V R W YK + N GY +I
Sbjct: 491 AEECLKKVES-RITNRDRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALI 549
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
SSL++ +E AEKI+EEW S +D RI N L+ Y + G L KAE + G +
Sbjct: 550 SSLVRVGDLEGAEKIYEEWLSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGK 609
Query: 396 PNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIE 455
PN TW ++A G + + K+A VL E WKP ++A L ++E D
Sbjct: 610 PNSTTWEILAEGNTGVKKISDALSCFKRA-VLAEGSNGWKPKPVNVSAFLDLCEEEADTA 668
Query: 456 GADYFIKLL 464
+ + LL
Sbjct: 669 TKEALMGLL 677
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 163/406 (40%), Gaps = 76/406 (18%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQIS----MW 108
+YR +S M +P +L+QW EG+ L +L ++K+ R +KRF AL+++ +
Sbjct: 60 VYRRISLMENPEMGSASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALELTYLCWLL 119
Query: 109 MTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSA 168
M ++ F L L + V+ +++ A F +L+L + +L +
Sbjct: 120 MCFETFFRLKVNLEKSELIPVGSVKNVDELAKEFGF---RLRLEQIQRDIL--WGEGALE 174
Query: 169 EKAEIIMQQM--RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG-----IDCD 221
+K++++ + D+ + + Y + +N + + K + EE+G D
Sbjct: 175 QKSDLVQWAIIYSDKSKGRLGVRYLTSLNKAFLRDLFGKKSLAKNVGEEEGGWRSSKVRD 234
Query: 222 KYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG----LSDKA 277
Y F + + + DW + + + V G L
Sbjct: 235 GYRFGLW-----------------------KAIRKDWDLLGSKVTFSVGNGRRGLLGPHF 271
Query: 278 LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-------KVY--- 327
L E+ ++ F R + + +K+D L VW R K KVY
Sbjct: 272 SKRLNDWEIDLVERFFLR-----LQTWRVSSDKEDRL-VWAREKSGTFFVEALYKVYEWM 325
Query: 328 -NRGYICVISS---------LLKFDGMESAEKIFEEWESR--NLCHDIRIPNHLIDAYCR 375
NRG +SS + K G+ SAE F SR + D RI L++AY +
Sbjct: 326 NNRGERFRLSSSDAAIQLDLIAKVCGVSSAEDYF----SRLPDTLKDKRIYGALLNAYVQ 381
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
+ KAE LI K + +G + +M T Y+ + +K V++M
Sbjct: 382 AKMRDKAEILIEKLRNKGYATTPLPFNVMMTLYMNLKELDK-VQSM 426
>gi|297809953|ref|XP_002872860.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
gi|297318697|gb|EFH49119.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
Length = 500
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 237/440 (53%), Gaps = 8/440 (1%)
Query: 27 SSYSTATGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQL 86
+S + +G + V +K S+YK LS +G M L+Q V EG P+ +L
Sbjct: 17 ASPAAISGEAAASVPTKAKKNPSVYK---KLSSLGTRGGKMEETLNQLVMEGVPVKKHEL 73
Query: 87 RIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVP 146
K R +++ AL+I WM +K V T +D AIRLDLIAK +G+E A +YFN +
Sbjct: 74 IRYAKDLRKFRQPQRALEIFEWMERKE-IVFTGSDHAIRLDLIAKTKGLEAAETYFNSLN 132
Query: 147 EKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKL 206
+ +K S Y +LLN Y K +KA+ + M D V ++ +N++M +Y + G +K+
Sbjct: 133 DSIKNQSTYGSLLNCYCVEKEEDKAKAHFENMVDLNHVSNSLPFNNLMAMYLRIGQSEKV 192
Query: 207 DSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAAS 266
+L+ M++K I T+S+ + +C + D +G++K++ M+A+ + W +A A+
Sbjct: 193 PALVVAMKQKNITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGISSWDTFANLAA 252
Query: 267 GYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLK 325
Y+K GL DKA L+ E M+ Y F+I+ YA N +V RVW K+ +
Sbjct: 253 IYIKVGLYDKAEEALKSLEN-KMNPHIRDCYHFLISLYAGIANASEVYRVWDLLKKRHPN 311
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
V N Y+ ++ +L K + ++ +KIF EWES +D+R+ N I +Y ++ + +AE +
Sbjct: 312 VNNSSYLTMLQALSKLNDIDGIKKIFTEWESTCWTYDMRMANVAISSYLKQNMYEEAEAV 371
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACL 445
A + + L+ L+N+Q++ ++ + A++ L+ W S E +++
Sbjct: 372 FNGAMTKCKGQFSKARQLLMMHLLKNDQADLALKHFEAAVLDLDKNWTW--SSELISSFF 429
Query: 446 GYYKKERDIEGADYFIKLLT 465
++++ +D++GA+ F K LT
Sbjct: 430 LHFEEAKDVDGAEEFCKTLT 449
>gi|255559466|ref|XP_002520753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540138|gb|EEF41715.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/419 (31%), Positives = 224/419 (53%), Gaps = 15/419 (3%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S V + +W EG + QL I+++ R KR+ HAL++ WMT++ L P D A+
Sbjct: 51 SAVIAIRKWKTEGHKVQKYQLNRIVRELRKMKRYKHALEVCEWMTQERELKLLPGDYAVH 110
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
LDL+AKV+G+ A +F +P++++ ALL+ Y K KAE +M++MRD VK
Sbjct: 111 LDLVAKVRGLTSAEKFFEDLPDEMRGWQTCTALLHTYVKCKDVVKAEALMEKMRDCSFVK 170
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
+ YN M+++Y G + K ++ E+ +K D TF++ LS CA+ +D E K V
Sbjct: 171 NPLPYNHMISLYIADGEFDKAKRIVEEL-KKSTTPDVVTFNLWLSMCASLNDVESA-KKV 228
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYDFVI 301
+ + DW Y+T + Y+K L + A++ L++ M + SR AY ++
Sbjct: 229 LLELKKLKIEADWITYSTLTNLYLKNKLLEDAVSTLKE-----MEKRASRKNRLAYSSLL 283
Query: 302 TQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
+ Y G+KD V R+W + K K+ + Y C++SSL+K + +E AE ++ EWES +
Sbjct: 284 SLYTNMGDKDAVHRIWNKMKSLFCKMNDAEYTCMLSSLIKLEEIEKAENLYTEWESVSGT 343
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
D ++ N L+ AY R + +E + +G P TW L+ G+L+ Q EK ++
Sbjct: 344 GDPQVANILLAAYINRNQIEDSENFYRRMVEKGVCPCYTTWELLTWGHLKTKQMEKVLDC 403
Query: 421 MKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLL 479
KKA+ +++ W P K + +++ + EGA+ F+ +L +S ++ + LL
Sbjct: 404 FKKAITIVKT---WSPDKRLVREVFKILEEKGNAEGAEEFLVMLRNAGYVSTEIYNSLL 459
>gi|125559056|gb|EAZ04592.1| hypothetical protein OsI_26742 [Oryza sativa Indica Group]
Length = 402
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 199/371 (53%), Gaps = 2/371 (0%)
Query: 109 MTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSA 168
M K + P D A+ LDLI ++ G A +YFN +P+K K Y ALLN Y
Sbjct: 1 MNAKGHVKFLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTRELLV 60
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
EK+ Q+M++ G V T+ YN++M +Y G ++K+ S++ EM+ GI D +++ I
Sbjct: 61 EKSLAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRIC 120
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM 288
+++ +D G++ + ME + +V+DW YA AS Y+K + +KA + L+K+E
Sbjct: 121 INSYGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKKAEA-K 179
Query: 289 MHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY-NRGYICVISSLLKFDGMESA 347
++ K S +Y+ +I+ Y G+K +V R+W N + N+ Y +++ L+K + +E A
Sbjct: 180 INIKDSDSYNHLISLYGHLGDKSEVNRLWALQMSNCNRHINKDYTTMLAVLVKLNEIEEA 239
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
E + +EWES D ++PN L+ Y ++ LL KAE L+ +G P +W ++A G
Sbjct: 240 EVLLKEWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTSWAIVAAG 299
Query: 408 YLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGK 467
Y + + K E K AL + T W P + L Y E D+E + F+ LL
Sbjct: 300 YAEKGDAAKAYELTKNALCVYAPNTGWIPRPGMIEMILKYLGDEGDVEEVEIFVDLLKVA 359
Query: 468 EIISADLQDRL 478
+++D+ D L
Sbjct: 360 VPLNSDMTDAL 370
>gi|242057165|ref|XP_002457728.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
gi|241929703|gb|EES02848.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
Length = 530
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 139/419 (33%), Positives = 231/419 (55%), Gaps = 15/419 (3%)
Query: 53 LYRMLSPMGDPNDSMVP-LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTK 111
LYR LS +G + V +L++WV EG E+L +K+ R YKR +HAL++ WM
Sbjct: 66 LYRRLSALGIAGEGSVSRVLNKWVREGGAPRSEELVKHVKELRKYKRHAHALEVMDWMVN 125
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
++ + AIRLDLI KV+G+E A +YF +P+ K Y ALL+ Y AK EKA
Sbjct: 126 ARGMNMSITNHAIRLDLIYKVRGLEAAENYFANLPDPAKNHRTYGALLSCYCSAKMEEKA 185
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
+ +QM + G T+ N++M++Y + ++K+DSL EM+ K I D T IL+++
Sbjct: 186 TYLYRQMDELGFWSGTLPINNLMSLYMKLDQHRKVDSLFEEMKVKNIKPDSLTCCILMTS 245
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
AA++ + I++++ M ++ V L W+ Y+T AS YV AG +KA + L+K E L+
Sbjct: 246 YAASNKIDAIEELLKEM-VEKDVSLGWSAYSTLASIYVNAGQVEKAESALKKLEGLIGAE 304
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGYICVISSLLKFDGMESAEKI 350
+ +DF+++ YA+ GN ++ RVW K V N Y+ ++ +L K + ++ ++I
Sbjct: 305 DGRQPFDFLMSLYASLGNLSEINRVWDVIKAKFSTVTNISYLGMLHALYKLNDIDRMKQI 364
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+ EWES +D+R+ N +I + R G+ +AETL KA+ +G E + +T L Y+
Sbjct: 365 YMEWESNYQTYDVRLTNMMIRGHLRLGMSEEAETLREKAKEKGVEFDSKTCELFLDHYM- 423
Query: 411 NNQSEKGVEAMKKALVLLEAGTRW-----KPSKECLAACLGYYKKERDIEGADYFIKLL 464
G M AL +E T+ K ++ + Y+++ +D + A+ F L
Sbjct: 424 ------GKGDMNSALNWVENMTKLPKKAGKLDQDRIYKFQKYFEEHKDADSAERFCNCL 476
>gi|125541465|gb|EAY87860.1| hypothetical protein OsI_09282 [Oryza sativa Indica Group]
Length = 517
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 203/382 (53%), Gaps = 3/382 (0%)
Query: 99 FSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIAL 158
+ AL+I WM ++F L+P+D +RL+LIAKV G QA Y+ + + L
Sbjct: 97 YEQALEILSWMDSHNDFRLSPSDHMVRLELIAKVHGTSQAEEYYRKLSTAASKKAASFPL 156
Query: 159 LNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGI 218
L+ Y ++ +KAE M +++ GL +N +M +Y T Y+K+ S+++ M+ I
Sbjct: 157 LHCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNI 216
Query: 219 DCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKAL 278
+ +++I ++ACA S + M D V + W+ Y T A+ + K G S KAL
Sbjct: 217 PRNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKAL 276
Query: 279 AVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISS 337
A LR +E + + Y F++T YAA ++D V+R+W+ K ++ Y+ +
Sbjct: 277 ACLRTAET-KLSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVC 335
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
L+K + AE F WE+ + HD+R+ N L+ AY R G + KAE L +G PN
Sbjct: 336 LIKVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPN 395
Query: 398 VRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGA 457
+TW ++ G++Q+ Q +K V AMKK L LL+ W+P E L A Y++++ +E A
Sbjct: 396 YKTWEILMEGFVQSKQMDKAVNAMKKGLSLLKT-CHWRPPLELLEAIAKYFEEQGSVEDA 454
Query: 458 DYFIKLLTGKEIISADLQDRLL 479
D FIK+L + S L LL
Sbjct: 455 DRFIKVLQKFNLTSLPLYKSLL 476
>gi|115436132|ref|NP_001042824.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|14495231|dbj|BAB60950.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532355|dbj|BAF04738.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|125525550|gb|EAY73664.1| hypothetical protein OsI_01547 [Oryza sativa Indica Group]
gi|125570062|gb|EAZ11577.1| hypothetical protein OsJ_01442 [Oryza sativa Japonica Group]
gi|215713519|dbj|BAG94656.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 504
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 128/404 (31%), Positives = 227/404 (56%), Gaps = 10/404 (2%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P+ MV L +W+ E RPL EQ+ +++FR +K+ HALQ+ WM + L
Sbjct: 52 PSGGMVEELGRWLRERRPLSEEQVLFCVRRFRKFKQNKHALQLMDWMEARG-VNLELKHH 110
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A+RLDL++K+ GI A YF +P+ + Y LLN YA + AEK + + M+
Sbjct: 111 ALRLDLVSKLNGIHAAEEYFGSLPDIFRSKQTYSTLLNCYAEHRMAEKGLELYENMKAMN 170
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+V + YN++M +Y +T +K+ + + +M+E GI +K+++ +L + +D E +
Sbjct: 171 IVSDILVYNNLMCLYLKTDQPEKIPTTVVKMQESGIQPNKFSYFVLTESYIMMNDIESAE 230
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS-EVLMMHNKFSRAYDFVI 301
K++ ++ V W++YAT A+GY K DKA L+K+ EVL H+ FS + ++
Sbjct: 231 KVLKELQEVNSV--PWSLYATLANGYNKLQQFDKAEFTLKKAEEVLDKHDVFS--WHCLL 286
Query: 302 TQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
+ YA GN +V R+W+ K K NR Y+ ++ +L K D ++ ++IF+EWES +
Sbjct: 287 SHYANSGNLSEVKRIWESLKSAFKKCTNRSYLVMLKALKKLDDFDTLQQIFQEWESSHEH 346
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
+D++IPN +I AY +G++ KAE + + + N RT+ + A YL+ ++ + ++
Sbjct: 347 YDMKIPNIIIQAYLDKGMVDKAEAM-RQTTMAQDHSNYRTFCIFAEFYLEKSKMNEALQV 405
Query: 421 MKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
K A +++ G W P K + L +++ +D++G + F + L
Sbjct: 406 WKDAKKMVK-GQDWVPEK-LVNRYLKHFEDSKDVDGMETFCECL 447
>gi|359480173|ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Vitis vinifera]
Length = 506
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 244/454 (53%), Gaps = 10/454 (2%)
Query: 13 IKAQLGLGNVLDSSSSYSTATGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLD 72
I A GL L ++++ + + + + S+R+ +LY LS +G S+ L+
Sbjct: 10 ISAGAGLARRLCTAAAATEPEEVAVQAASRSVRQP----RLYHRLSALGATGGSVADTLN 65
Query: 73 QWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKV 132
+ ++EG+ + +L IK+ R Y++F HAL+I WM + F + AD A+RLDL++K
Sbjct: 66 EHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWMENRKIF-FSYADYAVRLDLLSKT 124
Query: 133 QGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+G+ A YFN + K Y LLN Y K EKA + ++M + ++ +N+
Sbjct: 125 KGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKALALFEKMDELNFASTSLTFNN 184
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+M+++ + G + + L+ EM+++ I D +T++IL+ + A +D EG ++++ ++ +
Sbjct: 185 LMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYARLNDIEGAERVLEEIKREN 244
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM-MHNKFSRAYDFVITQYAACGNKD 311
L WT Y+ A+ YV A L +KA L+K E M H++ AY F+I+ YA N
Sbjct: 245 EDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDRL--AYHFLISLYAGINNLS 302
Query: 312 DVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+V RVW K K N Y ++ +L + ++ + FEEW+S D+R+ N +
Sbjct: 303 EVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFSFDVRLANVAV 362
Query: 371 DAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA 430
A+ ++ AE+++Y+A R + P + +L+ + + ++ M+ A ++
Sbjct: 363 RAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHLKVREIDTALKYMEAAASEVK- 421
Query: 431 GTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
W+P+ E + A L Y+++E+D+EGA+ F K+L
Sbjct: 422 NNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKIL 455
>gi|297743994|emb|CBI36964.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 244/454 (53%), Gaps = 10/454 (2%)
Query: 13 IKAQLGLGNVLDSSSSYSTATGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLD 72
I A GL L ++++ + + + + S+R+ +LY LS +G S+ L+
Sbjct: 49 ISAGAGLARRLCTAAAATEPEEVAVQAASRSVRQP----RLYHRLSALGATGGSVADTLN 104
Query: 73 QWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKV 132
+ ++EG+ + +L IK+ R Y++F HAL+I WM + F + AD A+RLDL++K
Sbjct: 105 EHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWMENRKIF-FSYADYAVRLDLLSKT 163
Query: 133 QGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+G+ A YFN + K Y LLN Y K EKA + ++M + ++ +N+
Sbjct: 164 KGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKALALFEKMDELNFASTSLTFNN 223
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+M+++ + G + + L+ EM+++ I D +T++IL+ + A +D EG ++++ ++ +
Sbjct: 224 LMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYARLNDIEGAERVLEEIKREN 283
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM-MHNKFSRAYDFVITQYAACGNKD 311
L WT Y+ A+ YV A L +KA L+K E M H++ AY F+I+ YA N
Sbjct: 284 EDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDRL--AYHFLISLYAGINNLS 341
Query: 312 DVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+V RVW K K N Y ++ +L + ++ + FEEW+S D+R+ N +
Sbjct: 342 EVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFSFDVRLANVAV 401
Query: 371 DAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA 430
A+ ++ AE+++Y+A R + P + +L+ + + ++ M+ A ++
Sbjct: 402 RAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHLKVREIDTALKYMEAAASEVK- 460
Query: 431 GTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
W+P+ E + A L Y+++E+D+EGA+ F K+L
Sbjct: 461 NNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKIL 494
>gi|358344191|ref|XP_003636175.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355502110|gb|AES83313.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 790
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/361 (33%), Positives = 201/361 (55%), Gaps = 12/361 (3%)
Query: 101 HALQISMWMTKKSN-FVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALL 159
H LQ+ WM + F ++ +DVAI+LDLIA+V G+ A S+F + LK Y ALL
Sbjct: 293 HVLQVYDWMNNRPERFRISASDVAIQLDLIARVHGVSSAESFFLNLTNDLKDKRTYGALL 352
Query: 160 NAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGID 219
NAY ++S EKAE +++ MR + + ++ +N MM + +Y K+D L+ EM+EK I
Sbjct: 353 NAYVHSRSREKAESLLEVMRSKRYLTHSLPFNLMMTLSMNLKDYDKVDMLVSEMKEKNIQ 412
Query: 220 CDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALA 279
D YT++I LS+C + E ++++ M D ++ +W+ ++T A+ Y+K L +KA
Sbjct: 413 LDIYTYNIWLSSCGSQGSIEKMEQVFEQMLKDPTIIPNWSTFSTMAAMYIKMELFEKAQE 472
Query: 280 VLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSL 338
L+K+E ++ + + ++++ Y + GNKD+V RVW YK + N GY VISS
Sbjct: 473 CLKKAEGRIL-GRDKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLGYHAVISSF 531
Query: 339 LKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
++ D +E AEK++EEW S D RI N LI Y ++G K + G PN
Sbjct: 532 VRMDDIERAEKLYEEWVSVRPSDDSRIGNLLISWYLKKGKSDKVFSFFKHMSEGGGCPNS 591
Query: 399 RTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKP--SKECLAACL------GYYKK 450
TW L++ G++ + + + ++KA + ++ + WKP +K C + GY+
Sbjct: 592 TTWELLSEGHIAEKRVSEALSCLEKAFMTSDSKS-WKPKANKNCAEVLIELLRKSGYHND 650
Query: 451 E 451
E
Sbjct: 651 E 651
>gi|223949005|gb|ACN28586.1| unknown [Zea mays]
Length = 396
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 192/367 (52%), Gaps = 2/367 (0%)
Query: 109 MTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSA 168
M+ K + P D AI LDLI ++ G+E A +YFN + +K K Y ALLN Y
Sbjct: 1 MSLKGHVKFLPKDHAIHLDLIGQIHGVEAAETYFNNLSDKDKTEKPYGALLNCYTRELLV 60
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
+KA + M++ G V T+ YN +M +Y + G ++++ S+M EM+ GI D +++ I
Sbjct: 61 DKALAHFRNMKELGFVFSTLPYNDLMGLYTRIGQHERVPSVMAEMKSNGIVPDNFSYRIC 120
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM 288
+++ +D G++ + ME + +V+DW YA AS Y+K L +KA + L K+E
Sbjct: 121 INSYGTRADFFGLENTLEEMECEPQIVVDWNTYAVVASNYIKGDLREKAYSALSKAEA-K 179
Query: 289 MHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY-NRGYICVISSLLKFDGMESA 347
+ + AY +I+ Y G+K + R+W N K Y NR Y+ ++S L+K D + A
Sbjct: 180 LDKQDPDAYRHLISLYGNLGDKSEAKRLWAVQMSNCKRYINRDYMNMLSVLVKLDEITEA 239
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
E + +EWES D R+PN L+ Y ++ LL KAE L+ +G P +W ++A G
Sbjct: 240 EDLLKEWESSQNSFDFRVPNVLLTGYRQKALLDKAEMLLDGFLKKGKTPPSTSWGIVAIG 299
Query: 408 YLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGK 467
Y + K E K AL + T W P L L Y E +++ + F+ LL
Sbjct: 300 YAEKGDVAKAYEMTKNALSVHAPNTGWIPRPSMLEMILKYLGDEGEVKDVEAFVSLLKAA 359
Query: 468 EIISADL 474
+ +D+
Sbjct: 360 VPVDSDM 366
>gi|223974825|gb|ACN31600.1| unknown [Zea mays]
Length = 515
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 228/419 (54%), Gaps = 15/419 (3%)
Query: 53 LYRMLSPMGDPNDSMVP-LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTK 111
LYR LS +G + V +L++WV EG + L +K+ R YKR +HAL++ WM
Sbjct: 50 LYRRLSALGSAGEGSVSRVLNKWVREGGATRSDDLVKHVKELRKYKRHAHALELMDWMVN 109
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
++ + AIRL+LI KV+G+E A +YF +P+ K Y +LL+ Y AK EKA
Sbjct: 110 ARGMNMSHTNHAIRLELIYKVRGLEAAENYFANLPDPAKNHRTYGSLLSCYCSAKMEEKA 169
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
+ +QM + G+ T+ N++M++Y + Y+K+ SL EM+ K + + T IL+++
Sbjct: 170 TNLYRQMDELGIWSSTLPINNLMSLYMKLDQYRKVVSLFEEMKLKNVKPNSLTCCILMTS 229
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
AA + + I++++ M ++ V L W+ Y+T AS YV AG KA + L+K E L+ +
Sbjct: 230 YAALNKIDDIEELLKEM-VEKDVTLGWSAYSTLASIYVNAGQFGKAESALKKLEGLISAH 288
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKI 350
+ +DF+++ YA+ GN +V RVW K KV N Y+ ++ +L K + ++ ++I
Sbjct: 289 DDRQPFDFLLSLYASLGNLSEVNRVWNVIKSKFSKVTNTSYLGMLHALYKLNDIDRMKQI 348
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+ EWES D+++ N +I ++ + G+ +AE L+ K + G E + +T L Y+
Sbjct: 349 YMEWESNYETFDVKLTNMMIRSHLKVGMTEEAEMLVEKVKENGAEFDTKTCELFLDHYM- 407
Query: 411 NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAA-----CLGYYKKERDIEGADYFIKLL 464
G E M AL LE T+ E L Y+++ +D +GA+ F L
Sbjct: 408 ------GTEDMNSALNWLENMTKLSKKAEKLDQDRIYKFQKYFEEHKDADGAERFCNCL 460
>gi|255548417|ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545745|gb|EEF47249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/460 (31%), Positives = 244/460 (53%), Gaps = 14/460 (3%)
Query: 25 SSSSYSTATGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDME 84
S +STA V +S R+ KLY LS +G S+ L++ + EG+ +
Sbjct: 16 SRQRFSTAEAAVPPAV-VSPRQSE---KLYHKLSALGATGGSVSRTLNEHIMEGKTITKI 71
Query: 85 QLRIIIKKFRLYKRFSHALQISMWMTK-KSNFVLTPADVAIRLDLIAKVQGIEQAASYFN 143
+L I++ R Y+RF HA +I WM K K NF + AD AIRLDLI K +GI A YFN
Sbjct: 72 ELSRCIRELRKYRRFDHAFEIMEWMEKRKMNF--SYADRAIRLDLIGKARGIAAAEDYFN 129
Query: 144 CV-PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
+ P + Y ALLN Y ++KA + Q+M ++ + ++ +N++M++Y + G
Sbjct: 130 GLSPSAKNHHTSYGALLNCYCKELMSDKALALFQEMDEKKFLYSSLPFNNLMSMYMRLGQ 189
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGV-VLDWTVY 261
+K+ L+ EM+++ + +T++I + + +D +G+D+++ + D G L WT Y
Sbjct: 190 PEKVPPLVDEMKKRKVSPCSFTYNIWMQSYGCLNDFQGVDRVLREIVNDGGKDNLQWTTY 249
Query: 262 ATAASGYVKAGLSDKALAVLRKSEVLM-MHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
+ A+ Y+KAG+ +KA + L+K E +M N+ AY F+I+ YA GN ++V RVW
Sbjct: 250 SNLATIYLKAGIFEKAESALKKLEAIMGFRNR--EAYHFLISIYAGTGNSNEVNRVWGLL 307
Query: 321 KQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
K + + N Y+ ++ +L K +E K F EWES +D+RI N I + + +
Sbjct: 308 KSSFNMINNLSYLVMLQALAKLKDVEGVAKCFREWESGCTNYDMRIANVAIRVFLQHDMY 367
Query: 380 HKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKE 439
+AE + A R P + +L+ +Q + ++ M+ A E WKP +E
Sbjct: 368 EEAELIFDDALKRTRGPFFKARERFMLFFLKIHQLDLALKHMRAAFSESEK-HEWKPLQE 426
Query: 440 CLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLL 479
+ A Y++ E+D++GA+ K+L +++ + LL
Sbjct: 427 TVNAYFDYFRTEKDVDGAEKLSKILKHINCLNSSVYSLLL 466
>gi|356510143|ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 530
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 224/419 (53%), Gaps = 9/419 (2%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S +P L WV+EG + +LR I + K + HAL++ W+ + NF + PAD A++
Sbjct: 70 SPLPALKNWVDEGNDVSHSELRRIARTLVKSKCYHHALEVVKWIENQKNFHMIPADYAMK 129
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
L+LI + + +A YF +P+ + + LL Y + KAE M ++ + GLV
Sbjct: 130 LELIIENYDLMEAEEYFMNLPDSAAKKAACLTLLRGYIRVRDTNKAETFMVKLYELGLVL 189
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG---ID 242
+N MM +Y T Y+K+ +M +M+ + C+ ++++ ++AC +G G ++
Sbjct: 190 SPHPFNEMMKLYLATCEYRKVPLVMQQMKRNKVPCNVLSYNLWMNAC-TEEEGYGVAAVE 248
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE-VLMMHNKFSRAYDFVI 301
+ M+ DR V + W+ AT A+ Y KAG S KA+ VL+ +E L N+ Y F+I
Sbjct: 249 TVFRQMQNDRNVEVGWSSLATLANAYKKAGQSKKAILVLKDAERKLSTCNRL--GYFFLI 306
Query: 302 TQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
T YA+ K+ VLR+W+ K ++ YIC++ L+K + A++IF EWES
Sbjct: 307 TLYASLKEKEGVLRLWEASKAVGGRISCANYICILICLVKLGDIVQAKRIFLEWESNCQK 366
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
+DIR+ N L+ AY R G + +AE+L +G PN +T ++ GY+ + ++ +
Sbjct: 367 YDIRVSNVLLGAYARNGSMEEAESLHLHTLQKGGCPNYKTLEILMEGYVNWQKMDEAIIT 426
Query: 421 MKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLL 479
MK+AL +++ W+P + A Y +K+ +++ A+ +I L + S L LL
Sbjct: 427 MKRALAMMK-DCHWRPPHGLVLAIAEYLEKDGNLKYANKYITDLRNFGLFSLSLYKILL 484
>gi|356536769|ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Glycine max]
Length = 516
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 229/433 (52%), Gaps = 16/433 (3%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGR-PLDMEQLRIIIKKFRLYKRFSHALQISMWMTK 111
L R L + P S V +++W EEG P QL I+++ R KR+ HAL++ WMT
Sbjct: 46 LGRRLLSLVYPKRSAVVAINKWKEEGHEPPRKYQLNRIVRELRKDKRYKHALEVCEWMTL 105
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
+ + L D A+ LDLI KV+G+ A +F +P++++ ALL+AY +KA
Sbjct: 106 QKDMKLVQGDYAVHLDLITKVRGLNSAEKFFEDLPDRMRGKQTCSALLHAYVQNNLVDKA 165
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E +M +M + L+ + YN M+++Y G +K+ ++ E+ + D TF++ L+A
Sbjct: 166 EALMLKMSECDLLINPLPYNHMISLYISNGKLEKVPKIIQEL-KMNTSPDIVTFNLWLAA 224
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
CA+ +D E ++++ ++ + + DW Y+T + Y+K +KA A +++ M N
Sbjct: 225 CASQNDVETAERVLLELKKAK-IDPDWVTYSTLTNLYIKNASLEKAGATVKE-----MEN 278
Query: 292 KFSR----AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMES 346
+ SR AY +++ + GNKDDV R+W++ K + + N YIC+ISSLLK
Sbjct: 279 RTSRKTRVAYSSLLSLHTNMGNKDDVNRIWEKMKASFRKMNDNEYICMISSLLKLGDFAG 338
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
AE ++ EWES + +D+R+ N L+ +Y + + AE + +G P TW L
Sbjct: 339 AEDLYREWESVSGTNDVRVSNILLGSYINQDQMEMAEDFCNQIVQKGVIPCYTTWELFTW 398
Query: 407 GYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTG 466
GYL+ EK ++ KA + + T+W P + + +++ +GA+ + +L
Sbjct: 399 GYLKRKDVEKFLDYFSKA---ISSVTKWSPDQRLVQEAFKIIEEQAHTKGAEQLLVILRN 455
Query: 467 KEIISADLQDRLL 479
++ ++ + L
Sbjct: 456 AGHVNTNIYNLFL 468
>gi|296083491|emb|CBI23460.3| unnamed protein product [Vitis vinifera]
Length = 444
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 207/374 (55%), Gaps = 3/374 (0%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY L G S+ L+ +++ + + ++ +KK R KRF AL++S M K+
Sbjct: 24 LYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDTVKKLRDRKRFYPALKLSETMAKR 83
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
+T +D AI LDLI K +G+ A +YF +PE K Y ALLN Y EKAE
Sbjct: 84 G-MNMTISDQAIYLDLITKTRGVAAAENYFIDLPETSKNHLTYGALLNCYCKELLTEKAE 142
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+M++M++ L ++ YNS+M +Y + G +K+ +++ E++ I D YT++I + A
Sbjct: 143 ALMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYNIWMRAL 202
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
AA +D G+++++ M+ D V DWT Y+ AS YV AG+ +KA L++ E
Sbjct: 203 AAVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYVDAGVFEKAEKALKELEKRNACRD 262
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIF 351
+ A+ F+IT Y GN +V RVW+ + K N Y+ +I L+ + AEK F
Sbjct: 263 LT-AFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPGAEKCF 321
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
EWES +DIR+ N LI AY + GLL KAE L A+ RG +PN +TW + +L+N
Sbjct: 322 REWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHARRRGAKPNAKTWEIFLAYHLKN 381
Query: 412 NQSEKGVEAMKKAL 425
+ ++ V+ + A+
Sbjct: 382 REMKQAVDCVANAI 395
>gi|242066836|ref|XP_002454707.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
gi|241934538|gb|EES07683.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
Length = 527
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 210/418 (50%), Gaps = 3/418 (0%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P + +D+W E + +LR I R +R+ HAL+I WM ++ +L+ D
Sbjct: 68 PRGAAAAAIDRWARESVHISQPELRRAIAMLRRARRYEHALEIFSWMESCNSVLLSSWDH 127
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A RLDLIAK G QA Y+N + + LL+ Y ++ +KAE M Q++ G
Sbjct: 128 AARLDLIAKAYGTSQAEEYYNKLQSPAARQAASFPLLHCYVTERNVQKAETFMAQLQSCG 187
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
L +N +M +Y T Y+K S++ M+ I + ++++ ++ CA S +
Sbjct: 188 LPVDPHSFNEIMKLYIATFQYEKALSVIDLMKRNNIPRNVLSYNLWMNVCAEVSGVAPVQ 247
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
+ M D V + W+ Y T A+ + K GL+ KA A LRK+E + Y FV+T
Sbjct: 248 SVFQEMLNDETVEVGWSTYCTLANIFRKNGLNTKAQACLRKAET-KLSPTGRLGYSFVMT 306
Query: 303 QYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
YAA + D V+R+W+ K ++ Y+ + +K + AE IF WE+ H
Sbjct: 307 CYAALNDSDGVMRLWEASKSVPGRIPAANYMTAMLCSIKVGDISQAEWIFGSWEAGCRKH 366
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
D+R+ N L+ AY R + KAE L +G PN +TW ++ GY+Q+ Q +K V M
Sbjct: 367 DVRVSNVLLGAYVRNRWIEKAERLHLHMLEKGARPNYKTWEILMEGYVQSRQMDKAVGCM 426
Query: 422 KKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLL 479
KK L LL++ W+P E + A +++++ + A +IK+L + S L L+
Sbjct: 427 KKGLSLLKS-CHWRPPLELMEAIGKHFEEQGSADDAYRYIKVLQRFNLTSLPLYKSLI 483
>gi|224125312|ref|XP_002329774.1| predicted protein [Populus trichocarpa]
gi|222870836|gb|EEF07967.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 188/347 (54%), Gaps = 60/347 (17%)
Query: 137 QAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNV 196
++ Y N +P+KLK VY ALLN YA K EKA +++ D G+++ + +N +M +
Sbjct: 14 RSREYANAIPQKLKGFMVYTALLNCYAREKDVEKAVATFKKLTDIGVMRSPLVFNILMYL 73
Query: 197 YYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL 256
Y+QT DGE VV
Sbjct: 74 YFQT------------------------------------DGE--------------VVG 83
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV 316
DW Y AA +KAG+ + A+ +L+K E + S A+D ++ YA GNKD++ R+
Sbjct: 84 DWNTYCVAADRCLKAGIMEMAMTMLKKLEGQITEKTKSIAFDTLLKLYARKGNKDELYRI 143
Query: 317 WKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRR 376
WK ++ K+YN+GY+ +ISSLL D +E+AE +F++WESR L + R+PN LI+AYCR
Sbjct: 144 WKSDEKRDKIYNKGYMSMISSLLMLDDIEAAEMMFKKWESRGLSYYFRVPNILINAYCRN 203
Query: 377 GLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKP 436
LL KA +LI A ++G+EP+ WY +A+GYL+ VEAMKKA+++ WKP
Sbjct: 204 NLLEKAGSLIDHAMMKGSEPSADAWYSLASGYLE-------VEAMKKAILVCPG---WKP 253
Query: 437 SKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLLNNIR 483
KE LA+CL + + + D A+ FI+LL + I S +RL I+
Sbjct: 254 IKETLASCLDHLEGKGDQNKAEEFIELLRTENIFSPVAHNRLRTYIK 300
>gi|343172214|gb|AEL98811.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 197/343 (57%), Gaps = 3/343 (0%)
Query: 117 LTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQ 176
+T +D AI LDLI K G+ A +YF +PE K Y ALLN Y +KAE +M+
Sbjct: 18 MTISDQAIHLDLIGKTHGVAAAENYFIDLPESSKNIECYGALLNIYCKELIPDKAEALME 77
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
+M++ GL + YNS+M +Y +TG +K+ +L+ EM+ I YT+++ + A AA
Sbjct: 78 KMKELGLPITAMSYNSLMTLYSKTGLPEKVPALVQEMKASDIMLQTYTYNVWMRALAAVK 137
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA 296
D G+++++ M+ D V DWT Y+ AS YV++ + +KA L++ E S
Sbjct: 138 DIYGVERVLDEMKRDGRVAEDWTTYSNLASIYVESKMFEKAENALKELEKRNTSQDLS-P 196
Query: 297 YDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
Y F++T Y GN +V RVW+ + K N Y+ +I L+ ++ AEK F +WE
Sbjct: 197 YQFLLTLYGKTGNLIEVYRVWRSLRLAFPKTPNVAYLNMIQRLVTLKDLKGAEKCFADWE 256
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
S +DIRI N L+ AY + GLL +A+ L +A RG +PN +TW + YL+ + +
Sbjct: 257 SSCTNYDIRIANVLMGAYIKDGLLQQAKELKKRACKRGAKPNAKTWEIFLEHYLKAGEVK 316
Query: 416 KGVEAMKKALVLLEA-GTRWKPSKECLAACLGYYKKERDIEGA 457
V+ +++A+ + G++W PS + + + +G++++ +D++GA
Sbjct: 317 LAVDCVERAVAIGRGDGSKWVPSSKVVNSIMGHFEQSKDVDGA 359
>gi|449458295|ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
gi|449518825|ref|XP_004166436.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
Length = 474
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/419 (31%), Positives = 224/419 (53%), Gaps = 15/419 (3%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWM-TK 111
LY LS +G S+ ++Q++ EG + +L IK+ R Y+R+ H LQI WM T+
Sbjct: 11 LYPRLSALGATGGSVAKTINQFIMEGNIVKKYELEKCIKELRKYRRYHHCLQIMEWMETR 70
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
K N+ T D A+RLDLI+KV G+ A YF +P K Y ALLN Y EKA
Sbjct: 71 KINYSFT--DYALRLDLISKVNGVTAAEKYFYDLPPSAKNRCTYGALLNCYCKEMMEEKA 128
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
+ ++M D + ++ +N++M +Y + + +K+ L+ EM+++G +T+++ +++
Sbjct: 129 LTLFKKM-DELKISTSLSFNNLMTMYMRMDHPEKVPPLIGEMKQRGFYLTTFTYNVWMNS 187
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
CA+ +D +++I+ M+ + DWT Y+ AS YVKAG +KA L+K E M +
Sbjct: 188 CASLNDIGKVEEILEEMKMEDRNKFDWTTYSNLASFYVKAGQFEKAELALKKLEEEMKSD 247
Query: 292 KFSR-AYDFVITQYAACGNKDDVLRVWKRYKQNLKVY----NRGYICVISSLLKFDGMES 346
K R Y +I+ YA+ N +V R+W K VY N Y+ ++ +L K +E
Sbjct: 248 KNDRLVYHCLISLYASTSNLSEVNRIWNALKS---VYSTMTNISYLVMLQALRKLKDIEG 304
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
++ ++EWES D+RI N +I AY ++ + A + A R P R +
Sbjct: 305 LKRTYKEWESNCRNFDLRIVNDIIGAYLQQDMYEDAAMIFEDATKRSKGPFSRAREMFMV 364
Query: 407 GYLQNNQSEKGVEAMKKALVLLEAGTR-WKPSKECLAACLGYYKKERDIEGADYFIKLL 464
+L+ Q + ++ AL E+ + W PS A L Y+++E+D+EGA+ F ++L
Sbjct: 365 YFLKLKQVDSAFSHLESALS--ESKEKEWHPSLATTTAFLNYFEEEKDVEGAEDFARIL 421
>gi|343172216|gb|AEL98812.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 202/358 (56%), Gaps = 4/358 (1%)
Query: 102 ALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNA 161
AL++S M K +T D AI LDLI K G+ A +YF +PE K Y ALLN
Sbjct: 4 ALKLSDTMAWKG-MNMTINDQAIHLDLIGKTHGVAAAENYFIDLPESSKNIECYGALLNI 62
Query: 162 YACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCD 221
Y +KAE +M++M++ GL + YNS+M +Y +TG +K+ +L+ EM+ I
Sbjct: 63 YCKELIPDKAEALMEKMKELGLPITAMSYNSLMTLYSKTGLPEKVPALVQEMKASDIMLQ 122
Query: 222 KYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL 281
YT+++ + A AA D G+++++ M+ D V DWT Y+ AS YV++ + DKA L
Sbjct: 123 TYTYNVWMRALAAVKDIYGVERVLDEMKRDGRVAEDWTTYSNLASIYVESKMFDKAENAL 182
Query: 282 RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLK 340
++ E + S Y F++T Y GN +V R+W+ + K N Y+ +I L+
Sbjct: 183 KELEKRNTSRELS-PYQFLLTLYGKTGNLIEVYRLWRSLRLAFPKTPNVAYLNMIQRLVT 241
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
++ AEK F +WES +DIRI N L+ AY + G L +A+ L +A RG +PN +T
Sbjct: 242 LKDLKGAEKCFADWESSCTNYDIRIANVLMGAYIKDGSLQQAKELKKRACKRGAKPNAKT 301
Query: 401 WYLMATGYLQNNQSEKGVEAMKKALVLLEA-GTRWKPSKECLAACLGYYKKERDIEGA 457
W + YL+ + + V+ +++A+ + G++W PS + + +G++++ +D++GA
Sbjct: 302 WEIFLEHYLKAGEVKLAVDCVERAVAIGRGDGSKWVPSTNVVNSIMGHFEQSKDVDGA 359
>gi|4558568|gb|AAD22661.1|AC007138_25 hypothetical protein [Arabidopsis thaliana]
gi|7268583|emb|CAB80692.1| hypothetical protein [Arabidopsis thaliana]
Length = 501
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 235/453 (51%), Gaps = 13/453 (2%)
Query: 27 SSYSTATGTSTREVTISL-RKGSSMYKLYRMLSPMGD-PNDSMVPLLDQWVEEGRPLDME 84
++ +TAT + E S+ K +Y+ LS +G M L+Q+V EG P+
Sbjct: 13 ATLATATAEISGEAAASVPTKAKKHRSIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKH 72
Query: 85 QLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNC 144
L K R +++ AL+I WM +K T +D AIRL+LIAK +G+E A +YFN
Sbjct: 73 DLIRYAKDLRKFRQPQRALEIFEWMERKE-IAFTGSDHAIRLNLIAKSKGLEAAETYFNS 131
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
+ + +K S Y +LLN Y K KA+ + M D V ++ +N++M +Y G +
Sbjct: 132 LDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPE 191
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K+ +L+ M+EK I T+S+ + +C + D +G++K++ M+A+ + W +A
Sbjct: 192 KVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANL 251
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW----KRY 320
A+ Y+K GL KA L+ E M+ Y F+I Y N +V RVW KRY
Sbjct: 252 AAIYIKVGLYGKAEEALKSLEN-NMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRY 310
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
V N Y+ ++ +L K D ++ +K+F EWES +D+R+ N I +Y ++ +
Sbjct: 311 PN---VNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYE 367
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKEC 440
+AE + A + + L+ L+N+Q++ ++ + A +L+ W S E
Sbjct: 368 EAEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHFEAA--VLDQDKNWTWSSEL 425
Query: 441 LAACLGYYKKERDIEGADYFIKLLTGKEIISAD 473
+++ ++++ +D++GA+ F K LT +S++
Sbjct: 426 ISSFFLHFEEAKDVDGAEEFCKTLTKWSPLSSE 458
>gi|18411800|ref|NP_567220.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163252|sp|Q93WC5.1|PP300_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01990, mitochondrial; Flags: Precursor
gi|14517494|gb|AAK62637.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|16323354|gb|AAL15390.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|332656708|gb|AEE82108.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 502
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 235/453 (51%), Gaps = 13/453 (2%)
Query: 27 SSYSTATGTSTREVTISL-RKGSSMYKLYRMLSPMGD-PNDSMVPLLDQWVEEGRPLDME 84
++ +TAT + E S+ K +Y+ LS +G M L+Q+V EG P+
Sbjct: 14 ATLATATAEISGEAAASVPTKAKKHRSIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKH 73
Query: 85 QLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNC 144
L K R +++ AL+I WM +K T +D AIRL+LIAK +G+E A +YFN
Sbjct: 74 DLIRYAKDLRKFRQPQRALEIFEWMERKE-IAFTGSDHAIRLNLIAKSKGLEAAETYFNS 132
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
+ + +K S Y +LLN Y K KA+ + M D V ++ +N++M +Y G +
Sbjct: 133 LDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPE 192
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K+ +L+ M+EK I T+S+ + +C + D +G++K++ M+A+ + W +A
Sbjct: 193 KVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANL 252
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW----KRY 320
A+ Y+K GL KA L+ E M+ Y F+I Y N +V RVW KRY
Sbjct: 253 AAIYIKVGLYGKAEEALKSLEN-NMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRY 311
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
V N Y+ ++ +L K D ++ +K+F EWES +D+R+ N I +Y ++ +
Sbjct: 312 PN---VNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYE 368
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKEC 440
+AE + A + + L+ L+N+Q++ ++ + A +L+ W S E
Sbjct: 369 EAEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHFEAA--VLDQDKNWTWSSEL 426
Query: 441 LAACLGYYKKERDIEGADYFIKLLTGKEIISAD 473
+++ ++++ +D++GA+ F K LT +S++
Sbjct: 427 ISSFFLHFEEAKDVDGAEEFCKTLTKWSPLSSE 459
>gi|226502666|ref|NP_001140872.1| uncharacterized protein LOC100272948 [Zea mays]
gi|194701536|gb|ACF84852.1| unknown [Zea mays]
gi|413924212|gb|AFW64144.1| hypothetical protein ZEAMMB73_253479 [Zea mays]
Length = 525
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/422 (30%), Positives = 215/422 (50%), Gaps = 11/422 (2%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P + +++W ++ + +LR I R +R+ AL+I WM S+ L+ D
Sbjct: 66 PAGTAAAAVERWAQDRVHVSQPELRRAIGMLRRERRYEQALEIFSWMESCSSLRLSSWDH 125
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A RLDLIAK QA Y+N + + LL+ Y + +KAE M Q++ G
Sbjct: 126 AARLDLIAKAYSTSQAEEYYNKLQSPATRQAASFPLLHCYVMERDVQKAETFMAQLQSHG 185
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
L +N +M +Y T Y+K+ S++ M+ I + ++++ ++ACA S + +
Sbjct: 186 LPVDPHSFNEIMKLYVATCQYEKVLSVIDLMKRNNIHRNVLSYNLWMNACAEVSGVDSVQ 245
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA----YD 298
+ +M D V + W+ Y T A+ + K GL+++A A L K+E K S A Y
Sbjct: 246 SVFQVMLNDETVKVGWSTYCTLANIFRKNGLNNEAQACLVKAEA-----KLSPAGRLGYS 300
Query: 299 FVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
FV+T YAA + D V+R+W+ K ++ Y+ +S +K + AE IF +WE+
Sbjct: 301 FVMTCYAALNDSDGVMRMWEASKSVPGRIPTAYYMAAMSCSIKVGDISQAECIFGKWEAG 360
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
HD+R+ N L+ AY R + KAE L +G PN +TW ++ GY+Q+ Q +K
Sbjct: 361 CRKHDVRVSNVLLGAYVRNRWIEKAERLHLHMLEKGACPNYKTWEILMEGYVQSRQMDKA 420
Query: 418 VEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDR 477
V MKK L LL++ W+P E + A +++++ + A +IK+L + S L
Sbjct: 421 VGCMKKGLSLLKS-CHWRPPVELMEAIGKHFEEQGSADDAYRYIKVLQRFNLTSLPLYKS 479
Query: 478 LL 479
L+
Sbjct: 480 LI 481
>gi|125532538|gb|EAY79103.1| hypothetical protein OsI_34209 [Oryza sativa Indica Group]
Length = 479
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 204/416 (49%), Gaps = 76/416 (18%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQW-VEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTK 111
L+R ++ DP + P+L+QW + E RP+ +++ IIK +RFS ALQ+SMWMT+
Sbjct: 84 LFRRVAAAADPRLPLSPVLEQWCLAEERPIAKPEIQSIIKYLCRRRRFSQALQLSMWMTE 143
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
+ + L+P DVA RL+LI KV G+++A YF+ +P++LK Y +LL YA A EKA
Sbjct: 144 RLHLHLSPGDVANRLELITKVHGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVEKA 203
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E + ++MR G+ + YN MM +Y Q G +++ S+ MEE
Sbjct: 204 EELFEKMRGMGMAS-SYAYNVMMRLYLQNGQVERVHSMHQAMEES--------------- 247
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
G+V D + T +AVLRK + L+
Sbjct: 248 ---------------------GIVPDVSTTHTL-------------VAVLRKKKTLVAAY 273
Query: 292 KFS---RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAE 348
+ +A + V+ + +C N Y+C I LLK + M AE
Sbjct: 274 VVAEDIKAIENVLEKANSC--------------------NSMYMCRIGVLLKMNDMVGAE 313
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
K +EEWES+++ HD R+ N L+DAYC+ GL+ KAE L+ + +G P T Y +A GY
Sbjct: 314 KAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKLAGGY 373
Query: 409 LQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
+ Q K + KKAL A W P + L Y+ +++++E A+ LL
Sbjct: 374 FKVGQVSKAADLTKKALA--SASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMASLL 427
>gi|357440753|ref|XP_003590654.1| WD repeat-containing protein [Medicago truncatula]
gi|355479702|gb|AES60905.1| WD repeat-containing protein [Medicago truncatula]
Length = 562
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 229/437 (52%), Gaps = 20/437 (4%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDME-QLRIIIKKFRLYKRFSHALQISMWMTK 111
L R L + P S V +++W EEG L + QL +I++ R KR+ HAL++ WM
Sbjct: 38 LGRRLLSLVYPKRSAVIAINKWKEEGHTLPRKYQLNRMIRELRKNKRYKHALEVCEWMKL 97
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
+++ L D A++LDLI KV+G+ A +F +P+K++ ALL+AY KA
Sbjct: 98 QNDIKLVEGDYAVQLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLTNKA 157
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E +M +M + G ++ + YN MM++Y G +K+ L E+ + D TF++LL+A
Sbjct: 158 EALMSKMSECGFLRSPVPYNRMMSLYISNGKLEKVPKLFEEL-KVNTSPDVVTFNLLLTA 216
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD----KALAVLRKSEVL 287
CA+ +D E ++++ ++ + V DW Y+T + Y++ D KA + L++
Sbjct: 217 CASENDVETAERVLLQLKKAK-VDPDWVTYSTLTNLYIRNASVDDCLEKAASTLKE---- 271
Query: 288 MMHNKFSR----AYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFD 342
M + SR AY +++ +A GN D+V R+W + K K+ + Y+C+ISSL+K
Sbjct: 272 -MEKRTSRETRVAYSSLLSLHANMGNVDEVNRIWGKMKACFCKMSDDEYVCMISSLVKLG 330
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
E +++EWES + +D+R+ N L+ +Y +G + AE + +G + +W
Sbjct: 331 DFAGVENLYKEWESVSGTNDVRVSNLLLTSYVDQGQMEMAEIFCNQLVEKGVCLSYSSWE 390
Query: 403 LMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIK 462
L+ GYL+ +K + KA + + +W P + +++ IEGA+ +
Sbjct: 391 LLTRGYLKKKDVKKFLHYFGKA---ISSVKQWIPDPRLVQEAFTVIQEQAHIEGAEQLLV 447
Query: 463 LLTGKEIISADLQDRLL 479
+L ++ ++ + L
Sbjct: 448 ILRNAGHVNTNIYNLFL 464
>gi|125536853|gb|EAY83341.1| hypothetical protein OsI_38557 [Oryza sativa Indica Group]
Length = 444
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 208/384 (54%), Gaps = 15/384 (3%)
Query: 103 LQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAY 162
LQI WM + L P D A+ LDL+AKV+G+ A +F +PE+ K PS ALL+AY
Sbjct: 25 LQICEWMRTQPEMRLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAY 84
Query: 163 ACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDK 222
+KAE ++++M G + + +N MM++Y +G +K+ ++ E+ I D
Sbjct: 85 VQHGRRDKAEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTIP-DL 143
Query: 223 YTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR 282
T++I L+ C+ + + +K+ +M+ +R VV DW ++ S Y+ AGL K
Sbjct: 144 VTYNIWLTYCSKKNSVKAAEKVYDLMKDER-VVPDWMTFSLLGSIYINAGLHVKG----- 197
Query: 283 KSEVLMMHNKFSR----AYDFVITQYAACGNKDDVLRVWKRYKQNLKVY-NRGYICVISS 337
+ ++ M + SR AY ++T YA+ ++ ++ RVW++ ++ + + + Y C+++S
Sbjct: 198 RDALVEMEKRASRKERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTS 257
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
L +F + AE + EWES + D RIPN ++ Y + G++ KAE + +G +P+
Sbjct: 258 LTRFGDIAEAESFYSEWESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPS 317
Query: 398 VRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGA 457
TW L GYL + + +K +E +KKAL LE +W P+ + A +++ DIE A
Sbjct: 318 YSTWELFVWGYLSDGRMDKVLECLKKALSCLE---KWDPNPQLATAIYSQIEEKGDIEAA 374
Query: 458 DYFIKLLTGKEIISADLQDRLLNN 481
+ + + ++ ++ + +L
Sbjct: 375 EKLLVMFREAGYVTTEIYNSVLRT 398
>gi|224064562|ref|XP_002301516.1| predicted protein [Populus trichocarpa]
gi|222843242|gb|EEE80789.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 128/426 (30%), Positives = 220/426 (51%), Gaps = 19/426 (4%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTK- 111
+YR LS +G S+ L++ + EG L IKK R Y RF HA+++ WM K
Sbjct: 1 MYRRLSELGASGGSVSKTLNELILEGGKTSKINLTTCIKKLRKYGRFDHAIEVMEWMQKR 60
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
K NF + D A+ LDL AK +GI A +YF+ +P ++ Y LLN Y +EKA
Sbjct: 61 KMNF--SHVDHAVYLDLTAKTKGIAAAENYFDNLPPSVQNHVTYSTLLNCYCKELMSEKA 118
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
+ ++M L+ ++ +N++M ++ + G +K+ ++ EM+++G+ +T++I + +
Sbjct: 119 LTLFEKMDKMKLLSTSMPFNNLMTLHMRLGQPEKVLGIVQEMKQRGVSPGTFTYNIWMQS 178
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM--- 288
+D EG+ +++ M+ D WT Y+ A+ YVKAGL DKA + LRK E +
Sbjct: 179 YGCLNDFEGVQRVLDEMKTDGKENFSWTTYSNLATIYVKAGLFDKAESALRKLEEQIECG 238
Query: 289 ---------MHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGYICVISSL 338
H+ AY F+I+ YA N +V RVW K + + N Y+ V+ +L
Sbjct: 239 RDCDFQKKRRHDADREAYHFLISLYAGTSNLSEVHRVWNSLKSSFRTTTNISYLNVLQAL 298
Query: 339 LKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
K +E K F+EWES +D+ + N I A + +A ++ +A R
Sbjct: 299 AKLKDVEGILKCFKEWESSCHSYDMGLANVAIRACLEHDMYEEAASIFDEALKRTKGLFF 358
Query: 399 RTWYLMATGYLQNNQSEKGVEAMKKALVLLEAG-TRWKPSKECLAACLGYYKKERDIEGA 457
+ + +L+N+Q + ++ MK A EA W+P ++ ++A L Y++ +D++GA
Sbjct: 359 KAREMFMVFFLKNHQPDLALKHMKAAFS--EAKEIEWQPDQKTVSAFLNYFEDGKDVDGA 416
Query: 458 DYFIKL 463
+ K+
Sbjct: 417 ERLCKI 422
>gi|255647669|gb|ACU24296.1| unknown [Glycine max]
Length = 484
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 223/413 (53%), Gaps = 6/413 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWM-TK 111
LYRMLS + ++ LDQ++ EG+ + +L +++ R Y+RF HAL+I WM +
Sbjct: 30 LYRMLSALDITGGTVSQTLDQYIMEGKVIKKPELERCVEQLRKYRRFQHALEIIEWMEIR 89
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
K NF + ++ A++LDL++K +G++ A ++F +P K Y ALLN Y +KA
Sbjct: 90 KVNF--SWSNYAVQLDLVSKTKGVDAAENFFGGLPPPAKNRYTYGALLNCYCKELMKDKA 147
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
M + G V + +N++M ++ + G +K+ L+ M+++ I +T+ I +++
Sbjct: 148 LSHFDTMDELGYVT-NLAFNNVMTLFMKLGEPQKVPQLVELMKKRTIPMSPFTYHIWMNS 206
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
CA+++D G +++ M+ + + W Y+ AS YVK +KA +L+ E +
Sbjct: 207 CASSNDLGGAERVYEEMKTENEGQIGWHTYSNLASIYVKFKDFEKAEMMLKMLEE-QVKP 265
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
K AY ++ YA GN +V RVW K V N Y+ ++S+L + + ME K F
Sbjct: 266 KQRDAYHCLLGLYAGTGNLGEVHRVWDSLKSVSPVTNFSYLVMLSTLRRLNDMEGLTKCF 325
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
+EWE+ + +D R+ + + A+ + +L +AE + +A R P R +L+
Sbjct: 326 KEWEASCVSYDARLVSVCVSAHLNQNMLEEAELVFEEASRRSKGPFFRVREEFMKFFLKK 385
Query: 412 NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
++ + V ++ AL ++ G +W+PS + + A YY++E D++G D F K+
Sbjct: 386 HELDAAVRHLEAALSEVK-GDKWRPSPQVVGAFFKYYEEETDVDGVDEFSKIF 437
>gi|357137419|ref|XP_003570298.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Brachypodium distachyon]
Length = 513
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 228/450 (50%), Gaps = 13/450 (2%)
Query: 35 TSTREVTISLRKGSSMYKLYRML-SPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKF 93
+ST T R+G + L SP G ++ +++W +E + LR + +
Sbjct: 28 SSTAAPTTDPREGDLLPWRLLRLRSPRGS---AVAAAIERWAQERGHVSRPDLRRAVSQL 84
Query: 94 RLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPS 153
R +R+ HAL+I WM + + L+P D A RLDLIAKV G A Y+ + +
Sbjct: 85 RRARRYDHALEILSWMDSRKDLNLSPLDHAARLDLIAKVHGTCHAEEYYKKLRNAACREA 144
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
LL+ Y ++ +KAE M ++ GL +N M+ +Y T ++K +++ M
Sbjct: 145 ASFPLLHCYVAERNVQKAESFMASLQSIGLPVDPHSFNEMLKLYVATCQFEKALAVIDLM 204
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ I + ++++ ++AC+ + + M D V + W+ + T A+ ++K GL
Sbjct: 205 KRSNIPRNVLSYNLWMNACSVLGVA-SVQSVFKEMVNDGTVEVGWSTFCTLANIFIKHGL 263
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYI 332
+ KALA LR +E + + Y FV+T YA + D V+R+W+ K ++ + Y+
Sbjct: 264 NSKALACLRTAET-KLSPRQRLGYSFVMTCYARLDDSDGVMRLWEASKSVPGRIPSANYM 322
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLC---HDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
I +K + AE IF WE+ C +D+R+ N L+ AY R G + KAE L
Sbjct: 323 STIICSIKVGDIAQAEWIFGSWEAE--CGRKNDVRVSNVLLGAYVRNGWIEKAERLHLHM 380
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYK 449
+G PN +TW ++ G++Q+ Q +K V A+KKAL L ++ W+P E + A +++
Sbjct: 381 LEKGAHPNYKTWEILLEGFVQSRQMDKAVNAIKKALSLSKS-CHWRPPLELVEAIATFFE 439
Query: 450 KERDIEGADYFIKLLTGKEIISADLQDRLL 479
+ +++ A+ +IK+L + S L +L
Sbjct: 440 EHGNVDDANRYIKVLQKFNLTSLPLYKSVL 469
>gi|357442213|ref|XP_003591384.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480432|gb|AES61635.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 231/415 (55%), Gaps = 10/415 (2%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMT-K 111
LYR L+ + ++ L+Q++ EG+ L ++L +++ R Y+RF HA +I WM +
Sbjct: 92 LYRRLADLEKTGGTVSQTLNQYIIEGKALGKDELERCVQELRKYRRFHHAFEIMEWMMMR 151
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
+ NF + + A+ LDL++KV+G+ +A ++FN P K Y +LLN Y +KA
Sbjct: 152 QINF--SWDNYAVYLDLVSKVKGVVEAENHFNSFPPPAKNKYTYGSLLNCYCKELMLDKA 209
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
+M + G + ++ + ++M++Y + K+ L++ M+E+ I ++T+ + +++
Sbjct: 210 LSHFDKMDEFGYLT-SLSFTNLMSMYMRLSQPSKVPQLVNVMKERKIRMTEFTYILWMNS 268
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
CAA +D ++++ M+ + +DW Y+ A+ Y+KAG +KA +L+K E +M
Sbjct: 269 CAALNDLGEVERVYEEMKREDEDKIDWKTYSNLAAIYIKAGFFEKAELMLKKVEGVMKPR 328
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
+ Y F+++ YA GN +V RVW K+ V NR Y+ ++S+L + + ME K+F
Sbjct: 329 Q-RETYHFLLSLYAGTGNVKEVYRVWGTLKKITPVTNRSYLIMLSNLRRLNDMEGIIKLF 387
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE-PNVRTWYLMATGYLQ 410
+EWESR++ +D R+ + AY + + K L+++ L+ P R + L+
Sbjct: 388 KEWESRHVSYDSRLVGVAVQAYLSQN-MDKEAVLVFEEALKSCRGPFFRIREMFMASLLE 446
Query: 411 NNQSEKGVEAMKKALVLLEAGT-RWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
Q + + ++ AL EA +++PS + ++A L YY++E D++G D K+L
Sbjct: 447 KGQLDGAMSHLEAALS--EASDYKYQPSPQVVSAFLKYYEEETDLDGVDELSKIL 499
>gi|449470082|ref|XP_004152747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 189/336 (56%), Gaps = 6/336 (1%)
Query: 82 DMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASY 141
+ +LR ++KKF KRF AL+ + M + NF + PA+ A+RL+L K G+ +A Y
Sbjct: 91 SITKLRRVVKKFCKSKRFERALEALILMETRDNFRMYPAEHALRLELTIKAHGLLKAEEY 150
Query: 142 FNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
FN +P + + LL+ Y ++ EKAE M ++RD GLV YN MM +Y T
Sbjct: 151 FNQLPTIASQKASSLPLLHGYVKERNTEKAEAFMVKLRDSGLVVNHHLYNEMMKLYVATY 210
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVY 261
+K+ ++ +M++ I + ++++ ++AC+ I+ + M D+ V + W+
Sbjct: 211 QNEKVPLVIKDMKQNQIPRNVLSYNLWMNACSELYGVGSIELVFEEMLTDKNVQVGWSTM 270
Query: 262 ATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK 321
T A+ Y++ GL +KA A L+++E + K Y F+IT YA+ +K+ V RVW+ K
Sbjct: 271 CTLANVYIQEGLVEKAFAALKEAEKKLSPCK-RLGYFFLITLYASLKDKEGVFRVWRASK 329
Query: 322 Q---NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
N N YIC++ L+K ++ AEK+F+EWE +DIR+ N L+ AY R GL
Sbjct: 330 AVSGNPTCAN--YICILLCLVKLGEIDKAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGL 387
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
L KAE+L RG PN +TW ++ G++++ Q+
Sbjct: 388 LEKAESLHRHTLGRGGNPNYKTWEILMEGWVRSQQN 423
>gi|356536682|ref|XP_003536865.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Glycine max]
Length = 593
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 224/413 (54%), Gaps = 6/413 (1%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWM-TK 111
LYRMLS + ++ LDQ++ EG+ + +L +++ R Y+RF HAL+I WM +
Sbjct: 30 LYRMLSALDITGGTVSQTLDQYIMEGKVIKKPELERCVEQLRKYRRFQHALEIIEWMEIR 89
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
K NF + ++ A++LDL++K +G++ A ++F +P K Y ALLN Y +KA
Sbjct: 90 KVNF--SWSNYAVQLDLVSKTKGVDAAENFFGGLPPPAKNRYTYGALLNCYCKELMKDKA 147
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
M + G V + +N++M ++ + G +K+ L+ M+++ I +T+ I +++
Sbjct: 148 LSHFDTMDELGYVT-NLAFNNVMTLFMKLGEPQKVPQLVELMKKRTIPMSPFTYHIWMNS 206
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
CA+++D G +++ M+ + + W Y+ AS YVK +KA +L+ E +
Sbjct: 207 CASSNDLGGAERVYEEMKTENEGQIGWHTYSNLASIYVKFKDFEKAEMMLKMLEE-QVKP 265
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
K AY ++ YA GN +V RVW K V N Y+ ++S+L + + ME K F
Sbjct: 266 KQRDAYHCLLGLYAGTGNLGEVHRVWDSLKSVSPVTNFSYLVMLSTLRRLNDMEGLTKCF 325
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
+EWE+ + +D R+ + + A+ + +L +AE + +A R P R +L+
Sbjct: 326 KEWEASCVSYDARLVSVCVSAHLNQNMLEEAELVFEEASRRSKGPFFRVREEFMKFFLKK 385
Query: 412 NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
++ + V ++ AL ++ G +W+PS + + A L YY++E D++G D K+L
Sbjct: 386 HELDAAVRHLEAALSEVK-GDKWRPSPQVVGAFLKYYEEETDVDGVDELSKIL 437
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 67/358 (18%), Positives = 147/358 (41%), Gaps = 58/358 (16%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L + Y K EKAE++++ + ++ K+ Y+ ++ +Y TGN ++ + +
Sbjct: 235 TYSNLASIYVKFKDFEKAEMMLKMLEEQVKPKQRDAYHCLLGLYAGTGNLGEVHRVWDSL 294
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ +++ ++LS +D EG+ K EA V D + + S ++ +
Sbjct: 295 KSVS-PVTNFSYLVMLSTLRRLNDMEGLTKCFKEWEAS-CVSYDARLVSVCVSAHLNQNM 352
Query: 274 SDKALAVLR------KSEVLMMHNKFSRAY------DFVITQYAAC-----GNKDDVLRV 316
++A V K + +F + + D + A G+K
Sbjct: 353 LEEAELVFEEASRRSKGPFFRVREEFMKFFLKKHELDAAVRHLEAALSEVKGDK------ 406
Query: 317 WKRYKQNLKVYNRGY--------ICVISSLLK---FD-------------------GMES 346
W+ Q + + + Y + +S +LK FD GM+
Sbjct: 407 WRPSPQVVGAFLKYYEEETDVDGVDELSKILKANNFDDSWIKSCITASKSSPEIDPGMKE 466
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT-EPNVRTWYLMA 405
+++ E+R L DI + +Y ++ + +A + +A+ R + EP +
Sbjct: 467 DSQVYHAQETRLL--DIMEKQLCVASYLKQNTVEEAALVFEEARRRRSKEPLFSIKEKLM 524
Query: 406 TGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKL 463
+ +L+ ++ + V ++ A ++ W+PS + + L YY++E +++G D K+
Sbjct: 525 SYFLEIHELDDAVRHLEVAFSEVKGDDEWRPSVQIVWDFLEYYEEEMNVDGHDELYKI 582
>gi|115482780|ref|NP_001064983.1| Os10g0501000 [Oryza sativa Japonica Group]
gi|113639592|dbj|BAF26897.1| Os10g0501000, partial [Oryza sativa Japonica Group]
Length = 451
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 136/437 (31%), Positives = 210/437 (48%), Gaps = 76/437 (17%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQW-VEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTK 111
L+R ++ DP + P+L+QW + E R + +++ IIK +RFS ALQ+SMWMT+
Sbjct: 56 LFRRVAAAADPRLPLSPVLEQWCLAEERHVAKPEVQSIIKYLCRRRRFSQALQLSMWMTE 115
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
+ + L+P DVA RL+LI KV G+++A YF+ +P++LK Y +LL YA A EKA
Sbjct: 116 RLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVEKA 175
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E + ++MR G+ + YN MM +Y Q G +++ S+ MEE
Sbjct: 176 EELFEKMRGMGMAS-SYAYNVMMRLYLQNGQVERVHSMHQAMEES--------------- 219
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
G+V D + T +AVLRK + L+
Sbjct: 220 ---------------------GIVPDVSTTHTL-------------VAVLRKKKTLVAAY 245
Query: 292 KFS---RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAE 348
+ +A + V+ + +C N Y+C I LLK + M AE
Sbjct: 246 VVAEDIKAIENVLEKANSC--------------------NSMYMCRIGVLLKMNDMVGAE 285
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
K +EEWES+++ HD R+ N L+DAYC+ GL+ KAE L+ + +G P T Y +A GY
Sbjct: 286 KAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKLAGGY 345
Query: 409 LQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKE 468
+ Q K + KKAL A W P + L Y+ +++++E A+ + LL
Sbjct: 346 FKVGQVSKAADLTKKALA--SASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLV 403
Query: 469 IISADLQDRLLNNIRNG 485
+ D+ LL N
Sbjct: 404 TPTRDIYHGLLKTYVNA 420
>gi|297843032|ref|XP_002889397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335239|gb|EFH65656.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 236/450 (52%), Gaps = 9/450 (2%)
Query: 20 GNVLDSSSSYSTATGTSTREVTISLRKGSSMYK-LYRMLSPMGDPNDSMVPLLDQWVEEG 78
G V S SS + A G E ++ +S + LY+ LS + ++ L+Q++ EG
Sbjct: 29 GVVEASVSSPAAANGV---EASVPAPTAASRQRELYKKLSKLSVAGGTVAETLNQFIMEG 85
Query: 79 RPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQA 138
+ L K R ++R HAL+I WM K+ + +D AIRLDLIAK +G+E A
Sbjct: 86 ITVRKVDLFRCAKDLRKFRRHQHALEIFDWMEKR-KMTFSVSDHAIRLDLIAKAKGLEAA 144
Query: 139 ASYFNCV-PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVY 197
+YFN + P S Y AL+N Y KA+ ++M + V ++ +N+MM++Y
Sbjct: 145 ENYFNNLDPSAKNHQSTYGALMNCYCVELEEGKAKAHFEKMDELNFVNNSLPFNNMMSMY 204
Query: 198 YQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLD 257
+ +K+ L+ M+++GI T+SI + +C + +D +G++KI+ M D
Sbjct: 205 MRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTT 264
Query: 258 WTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW 317
W ++ A+ + KAGL +KA + L+ E M N ++ F+I+ YA +V RVW
Sbjct: 265 WNTFSNLAAIFTKAGLYEKAESALKSMEKKMNPNN-RDSHHFLISLYAGISKGTEVYRVW 323
Query: 318 KRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRR 376
+ K+ +V N Y+ ++ ++ K ++ +KIF EWES+ +D+R+ N I+ Y +
Sbjct: 324 ESLKKARPEVNNLSYLVMLQAMSKLGDIDGIKKIFTEWESKCWAYDMRLANIAINTYLKG 383
Query: 377 GLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV-LLEAGTRWK 435
+ +AE ++ A + P + L+ L+N +++ ++ ++ A+ E W
Sbjct: 384 NMYEEAEKILDGAMEKSKGPFSKARQLLMIHLLENGKADLAMKHLETAVSDPAENKDEWS 443
Query: 436 PSKECLAACLGYYKKERDIEGADYFIKLLT 465
S E ++ ++K+ +D++GA+ F K+L+
Sbjct: 444 WSSELVSLFFLHFKRAKDVDGAEDFCKILS 473
>gi|125579556|gb|EAZ20702.1| hypothetical protein OsJ_36321 [Oryza sativa Japonica Group]
Length = 491
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 220/424 (51%), Gaps = 23/424 (5%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S +L +W EEGR + QL ++ + R Y+RF HAL+ +K +F P
Sbjct: 40 PKRSAAVVLRRWAEEGRTVQKYQLNRVVCQLRKYRRFKHALE------RKLSFFRGPRRC 93
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+ G+ A +F +PE+ K PS ALL+AY +KAE ++++M G
Sbjct: 94 TS--TSCQRSGGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAKAG 151
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ + +N MM++Y +G +K+ ++ E+ I D T++I L+ C+ + + +
Sbjct: 152 YLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTIP-DLVTYNIWLTYCSKKNSVKAAE 210
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYD 298
K+ +M+ +R VV DW ++ S Y+ AGL K + ++ M + SR AY
Sbjct: 211 KVYDLMKDER-VVPDWMTFSLLGSIYINAGLHVKG-----RDALVEMEKRASRKERAAYS 264
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNLKVY-NRGYICVISSLLKFDGMESAEKIFEEWESR 357
++T YA+ ++ ++ RVW++ ++ + + + Y C+++SL +F + AE + EWES
Sbjct: 265 SLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEWESA 324
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ D RIPN ++ Y + G++ KAE + +G +P+ TW L GYL + + +K
Sbjct: 325 SGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYLSDGRMDKV 384
Query: 418 VEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDR 477
+E +KKAL LE +W P+ + A +++ DIE A+ + + ++ ++ +
Sbjct: 385 LECLKKALSCLE---KWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREAGYVTTEIYNS 441
Query: 478 LLNN 481
+L
Sbjct: 442 VLRT 445
>gi|449515498|ref|XP_004164786.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 189/336 (56%), Gaps = 6/336 (1%)
Query: 82 DMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASY 141
+ +LR ++KKF KR+ AL+ + M + NF + PA+ A+RL+L K G+ +A Y
Sbjct: 91 SITKLRRVVKKFCKSKRYERALEALILMETRDNFRMYPAEHALRLELTIKAHGLLKAEEY 150
Query: 142 FNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
FN +P + + LL+ Y ++ EKAE M ++RD GLV YN MM +Y T
Sbjct: 151 FNQLPTIASQKASSLPLLHGYVKERNTEKAEAFMVKLRDSGLVVNHHLYNEMMKLYVATY 210
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVY 261
+K+ ++ +M++ I + ++++ ++AC+ I+ + M D+ V + W+
Sbjct: 211 QNEKVPLVIKDMKQNLIPRNVLSYNLWMNACSELYGVGSIELVFEEMLTDKNVQVGWSTM 270
Query: 262 ATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK 321
T A+ Y++ GL +KA A L+++E + K Y F+IT YA+ +K+ V RVW+ K
Sbjct: 271 CTLANVYIQEGLVEKAFAALKEAEKKLSPCK-RLGYFFLITLYASLKDKEGVFRVWRASK 329
Query: 322 Q---NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
N N YIC++ L+K ++ AEK+F+EWE +DIR+ N L+ AY R GL
Sbjct: 330 AVSGNPTCAN--YICILLCLVKLGEIDKAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGL 387
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
L KAE+L RG PN +TW ++ G++++ Q+
Sbjct: 388 LEKAESLHRHTLGRGGNPNYKTWEILMEGWVRSQQN 423
>gi|168063926|ref|XP_001783918.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664548|gb|EDQ51263.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 130/396 (32%), Positives = 212/396 (53%), Gaps = 2/396 (0%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S+VPL+ +W+ EG LD L I+ + R +R+ A++IS WM+++ N AD
Sbjct: 1 PQKSVVPLIKEWLNEGYALDKRVLVSILIRLRRRQRYKQAMEISDWMSEEKNIKWEMADN 60
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+R+DL AK++ A P + K Y LL YA + A+KA+ ++++++ G
Sbjct: 61 IVRIDLKAKMKQFAVAEQLLEDSPPEFKTELAYHTLLRNYADYQMAQKADALLEKLKGTG 120
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
++ +N MM +Y + G K+ ++ +M+ G+ D YT++IL+ A + D EG++
Sbjct: 121 ILTLPFAFNQMMLLYKRKGMMNKVTEILADMKTHGVPKDVYTYNILMDVKARSGDIEGME 180
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
KI + AD V D + T A+ V AGL DKA + L++ E + S AYD +I+
Sbjct: 181 KIFEELSADENVKADAATFGTLATFCVHAGLLDKARSYLKEMEEGDVFRNRS-AYDILIS 239
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
QY A G+++ V RVW++ K V NR YI VI + K +E AE+++
Sbjct: 240 QYGAVGDQEGVERVWEKVKSGPVVSNRSYITVIEAFGKLGMVEKAEELYGIMSKSKGLIL 299
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
R N L+ AY R+GL+ KAE L+ G + N T++ + TGYL+ +Q +K + MK
Sbjct: 300 SRQFNSLLSAYARQGLMEKAEKLVEDMVKLGRKKNAVTYHHLVTGYLKTDQLDKALAVMK 359
Query: 423 KALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
+A + G R + E L + L Y + D+ A+
Sbjct: 360 EAQGDSKQG-RSRLWVETLISVLDAYAERGDVISAE 394
>gi|115457716|ref|NP_001052458.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|32490390|emb|CAE04700.1| OSJNBa0041M06.2 [Oryza sativa Japonica Group]
gi|38344779|emb|CAE01505.2| OSJNBb0026L04.10 [Oryza sativa Japonica Group]
gi|113564029|dbj|BAF14372.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|125543501|gb|EAY89640.1| hypothetical protein OsI_11170 [Oryza sativa Indica Group]
gi|125589896|gb|EAZ30246.1| hypothetical protein OsJ_14297 [Oryza sativa Japonica Group]
gi|215767374|dbj|BAG99602.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 524
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 139/465 (29%), Positives = 227/465 (48%), Gaps = 50/465 (10%)
Query: 45 RKGSSMY---KLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSH 101
R+ S Y LYR L G ++ +D +++ + ++ + +++ R +
Sbjct: 10 RRSSKKYVDEALYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRLRKQALYRP 69
Query: 102 ALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNA 161
AL++S M ++ T +D AIRLDL+AK +GI A YF +PE K Y ALLN
Sbjct: 70 ALKLSEVMARRG-MNPTVSDQAIRLDLVAKSRGIAAAEKYFLDLPETSKTHLTYGALLNC 128
Query: 162 YACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCD 221
Y EKAE +M +M++ + YNS+M +Y + ++K+ S++ +M+ + D
Sbjct: 129 YCKDLMTEKAEALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPD 188
Query: 222 KYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL 281
YT+++ + A AA D +G+++++ M+ D V DWT Y+ AS YV AGL +KA A L
Sbjct: 189 IYTYNVWMRALAARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEKAEAAL 248
Query: 282 RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLK 340
++ E N AY F+IT YA N +V RVW+ K+N + N Y+ +I +L
Sbjct: 249 KELEKWNTSNDLE-AYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQALAN 307
Query: 341 FDGMESAEKIFEEWESR----------------------------------NLCH---DI 363
+ AE F+EWE++ L H DI
Sbjct: 308 LKDLPGAEACFKEWEAQYINPPKTNTKAPGTAETSSNESDVKATKDKGTDGELKHPKYDI 367
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK----GVE 419
R+ N +I AY G+ KA + +A++RG N +TW + YL+ +
Sbjct: 368 RVANAMIKAYITEGMFDKAVAVKKRAKMRGGRLNAKTWEIFMEHYLKEGDLKMVHWCADR 427
Query: 420 AMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
A+KK AG W P E + Y++K +D++GA+ F+++L
Sbjct: 428 AIKKG---HSAGRIWVPPHEVTETLMDYFEKNKDVDGAEKFVEVL 469
>gi|15217734|ref|NP_171739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173342|sp|Q9FZ24.1|PPR4_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02370, mitochondrial; Flags: Precursor
gi|9857533|gb|AAG00888.1|AC064879_6 Hypothetical protein [Arabidopsis thaliana]
gi|332189300|gb|AEE27421.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 234/450 (52%), Gaps = 6/450 (1%)
Query: 20 GNVLDSSSSYSTATGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGR 79
NV+++S S S A R + S +LY+ LS + ++ L+Q++ EG
Sbjct: 41 ANVVEASVS-SPAAENGVRTSVAAPTVASRQRELYKKLSMLSVTGGTVAETLNQFIMEGI 99
Query: 80 PLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAA 139
+ + L K R ++R HA +I WM K+ + +D AI LDLI K +G+E A
Sbjct: 100 TVRKDDLFRCAKTLRKFRRPQHAFEIFDWMEKR-KMTFSVSDHAICLDLIGKTKGLEAAE 158
Query: 140 SYFNCV-PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYY 198
+YFN + P S Y AL+N Y EKA+ + M + V ++ +N+MM++Y
Sbjct: 159 NYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYM 218
Query: 199 QTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDW 258
+ +K+ L+ M+++GI T+SI + +C + +D +G++KI+ M D W
Sbjct: 219 RLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTW 278
Query: 259 TVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK 318
++ A+ Y KAGL +KA + L+ E M N ++ F+++ YA +V RVW+
Sbjct: 279 NTFSNLAAIYTKAGLYEKADSALKSMEEKMNPNN-RDSHHFLMSLYAGISKGPEVYRVWE 337
Query: 319 RYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
K+ +V N Y+ ++ ++ K ++ +KIF EWES+ +D+R+ N I+ Y +
Sbjct: 338 SLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGN 397
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV-LLEAGTRWKP 436
+ +AE ++ A + P + L+ L+N++++ ++ ++ A+ E W
Sbjct: 398 MYEEAEKILDGAMKKSKGPFSKARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEWGW 457
Query: 437 SKECLAACLGYYKKERDIEGADYFIKLLTG 466
S E ++ +++K +D++GA+ F K+L+
Sbjct: 458 SSELVSLFFLHFEKAKDVDGAEDFCKILSN 487
>gi|357110627|ref|XP_003557118.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Brachypodium distachyon]
Length = 536
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 134/475 (28%), Positives = 230/475 (48%), Gaps = 57/475 (12%)
Query: 45 RKGSSMY---KLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSH 101
R+ S Y LYR L G ++ +D +++ + ++ + +++ R + +
Sbjct: 10 RRSSKKYVEEALYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRLRRQELYRP 69
Query: 102 ALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNA 161
AL+++ M ++ T D AIRLDL+AK +GI A YF +PE K Y ALLN
Sbjct: 70 ALKLTEVMARRG-MNPTVGDQAIRLDLVAKSRGIAAAEKYFMDLPETSKTHLTYGALLNC 128
Query: 162 YACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCD 221
Y EKAE +M++M++ + YNS+M +Y + +K+ S++ +M+ + D
Sbjct: 129 YCKESMTEKAEALMEKMKELNFAFTAMSYNSLMTLYTKVNQPEKVPSIIQDMKADDVLPD 188
Query: 222 KYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL 281
YT+++ + + AA D G+++++ M+ D VV DWT Y+ AS YV+AGL +KA A L
Sbjct: 189 VYTYNVWMRSLAARQDISGVERVIEEMKRDGRVVPDWTTYSNLASIYVEAGLFEKAEAAL 248
Query: 282 RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLK 340
++ E N AY F+IT Y N +V VW+ K+ N + N Y+ +I L
Sbjct: 249 KELEKRNTSNDLE-AYQFLITLYGRTQNLVEVHHVWRSLKRNNPRKANMSYLNMIQVLAN 307
Query: 341 FDGMESAEKIFEEWESR------------------------------------------- 357
+ +AE F+EWE+R
Sbjct: 308 LKDLPAAEACFKEWEARYIRPPKTKAIDAVTTETSKLDQESSTTNASNNDSDAKGTEDKG 367
Query: 358 ----NLCH---DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
++ H DIR+ N L+ AY G+L KA L +A++RG N +TW + Y++
Sbjct: 368 MEEIDMKHPKYDIRVANALMKAYVTEGMLDKAVALKKRAKMRGGRLNSKTWEIFMEHYIK 427
Query: 411 NNQSEKGVEAMKKALVLLEAGTR-WKPSKECLAACLGYYKKERDIEGADYFIKLL 464
+ +A+ + R W P ++ +GY++K++D++GA+ F+++L
Sbjct: 428 VGDLKNAHWCTDRAIKKGHSSGRIWVPPRDVTETLMGYFEKKKDVDGAEKFVEVL 482
>gi|326507912|dbj|BAJ86699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 224/430 (52%), Gaps = 21/430 (4%)
Query: 53 LYRMLSPM--GDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWM- 109
LY+ +S + G P ++ +D+W+ + R Q+ +++ +K+ AL++ WM
Sbjct: 51 LYKRISKVSQGKPPGTVAAEMDEWLRQRRRPSQLQVLAYVRELTRFKKNESALELLDWME 110
Query: 110 TKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAE 169
++ +N L+P A+RLDLI+KV GI+ A YF +P+ K Y LLN Y A
Sbjct: 111 SRGAN--LSPGHQAMRLDLISKVHGIQAAEEYFWSIPDISKSVKTYSCLLNCYGKHGLAY 168
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
K ++M+ + +V + YN +M +Y + G +K+ S EM E GI DK+ + L+
Sbjct: 169 KGLEFYEKMKAKSIVPDKLVYNYLMILYQKAGQPEKILSTFEEMRESGISADKFAYFTLI 228
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
+ +D + +K++A E + + W++Y A+ Y+K L KA ++K+E M
Sbjct: 229 ESYITMNDLDAAEKVLA--ELQKVAPVHWSLYTLMANNYIKLKLFGKAEVAIKKAEEGMD 286
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAE 348
R++ +++ +A CGN +V RVWK K K NR Y+ ++ +L D ES +
Sbjct: 287 KADL-RSWYALLSLHAHCGNSTEVKRVWKSLKSTFKKCLNRSYLVMLQALSMIDDFESLQ 345
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY-----L 403
+IF+EW+S + +D RI N +I AY +G++ +AE + +G W+ +
Sbjct: 346 QIFQEWQSSHEHYDKRIANVVIKAYLDKGMIDEAEAIRQSTMAQG------HWHEGMVCI 399
Query: 404 MATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKL 463
A YL + +E ++ A ++ A +W PSKE ++ L +Y++ D GA+ F++
Sbjct: 400 FAEFYLDKSDVNAALEILRDAKNMVMA-RKWVPSKELVSRFLKHYEESNDASGAESFLEC 458
Query: 464 LTGKEIISAD 473
L E + D
Sbjct: 459 LKKLECLDLD 468
>gi|17529324|gb|AAL38889.1| unknown protein [Arabidopsis thaliana]
Length = 537
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 234/450 (52%), Gaps = 6/450 (1%)
Query: 20 GNVLDSSSSYSTATGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGR 79
NV+++S S S A R + S +LY+ LS + ++ L+Q++ EG
Sbjct: 41 ANVVEASVS-SPAAENGVRTSVAAPTVASRQRELYKKLSMLSVTGGTVAETLNQFIMEGI 99
Query: 80 PLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAA 139
+ + L K R ++R HA +I WM K+ + +D AI LDLI K +G+E A
Sbjct: 100 TVRKDDLFRCAKTLRKFRRPQHAFEIFDWMEKR-KMTFSVSDHAICLDLIGKTKGLEAAE 158
Query: 140 SYFNCV-PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYY 198
+YFN + P S Y AL+N Y EKA+ + M + V ++ +N+MM++Y
Sbjct: 159 NYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYM 218
Query: 199 QTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDW 258
+ +K+ L+ ++++GI T+SI + +C + +D +G++KI+ M D W
Sbjct: 219 RLSQPEKVPVLVDAIKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTW 278
Query: 259 TVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK 318
++ A+ Y KAGL +KA + L+ E M N ++ F+++ YA +V RVW+
Sbjct: 279 NTFSNLAAIYTKAGLYEKADSALKSMEEKMNPNN-RDSHHFLMSLYAGISKGPEVYRVWE 337
Query: 319 RYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
K+ +V N Y+ ++ ++ K ++ +KIF EWES+ +D+R+ N I+ Y +
Sbjct: 338 SLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGN 397
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV-LLEAGTRWKP 436
+ +AE ++ A + P + L+ L+N++++ ++ ++ A+ E W
Sbjct: 398 MYEEAEKILDGAMKKSKGPFSKARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEWGW 457
Query: 437 SKECLAACLGYYKKERDIEGADYFIKLLTG 466
S E ++ +++K +D++GA+ F K+L+
Sbjct: 458 SSELVSLFFLHFEKAKDVDGAEDFCKILSN 487
>gi|224130976|ref|XP_002320971.1| predicted protein [Populus trichocarpa]
gi|222861744|gb|EEE99286.1| predicted protein [Populus trichocarpa]
Length = 473
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 229/432 (53%), Gaps = 13/432 (3%)
Query: 52 KLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTK 111
+LY+ LS +G +S+ L+ +V EG + L I++ R Y RF +A+++ WM K
Sbjct: 14 RLYKRLSELGASGESVSKTLNDFVLEGGKTNKVDLLACIRELRKYGRFDYAIEVMEWMQK 73
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKA 171
+ V A+ LDLIAK +GI A +YF+ + + S + ALL+ Y +EKA
Sbjct: 74 RKMNV----SHAVYLDLIAKKEGIAAAENYFDGLSPSEQNHSTHGALLSCYCRELMSEKA 129
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
+ ++M + ++ +N++++++ + +K+ ++ EM++KG+ +T+++ + +
Sbjct: 130 LTLFEKMDKMKFLLTSLPFNNLISLHLRLDQPEKVLPIVQEMKQKGVSPCTFTYNMWMQS 189
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
+D EG+++++ M+ D WT Y A+ YVKAG DKA + L+K E +
Sbjct: 190 YGCLNDFEGVERVLDEMKMDGQKNFSWTTYTNLATIYVKAGHFDKAESALKKVEE-QIER 248
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGYICVISSLLKFDGMESAEKI 350
+ AY F+IT YA N +V RVW K N N Y+ ++ +L K +E K
Sbjct: 249 DYREAYHFLITLYAGTSNLGEVNRVWNSLKSNFHTTTNVSYLTMLHTLAKLKDVEGLLKC 308
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP---NVRTWYLMATG 407
F+EWES +D+R+ N I A C +++ LI+ L+ TE N R +++
Sbjct: 309 FKEWESSCHSYDMRLANVAIRA-CLEHDMYEEAALIFDDALKRTEGLFFNAREMFMVF-- 365
Query: 408 YLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGK 467
+L+N+Q + ++ MK A ++ W+P + ++A Y++ E+D+ GA+ K+L
Sbjct: 366 FLKNHQLDLALKHMKAAFSEVKE-IEWQPEPKTVSAFFAYFEDEKDVNGAERLCKILKHI 424
Query: 468 EIISADLQDRLL 479
+ ++ D LL
Sbjct: 425 NRLDSNAYDLLL 436
>gi|116309055|emb|CAH66166.1| H0107B07.5 [Oryza sativa Indica Group]
Length = 524
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 137/465 (29%), Positives = 226/465 (48%), Gaps = 50/465 (10%)
Query: 45 RKGSSMY---KLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSH 101
R+ S Y LYR L G ++ +D +++ + ++ + +++ R +
Sbjct: 10 RRSSKKYVDEALYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRLRKQALYRP 69
Query: 102 ALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNA 161
AL++S M ++ T +D AIRLDL+AK +GI A YF +PE K Y ALLN
Sbjct: 70 ALKLSEVMARRG-MNPTVSDQAIRLDLVAKSRGIAAAEKYFLDLPETSKTHLTYGALLNC 128
Query: 162 YACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCD 221
Y EKAE +M +M++ + YNS+M +Y + ++K+ S++ +M+ + D
Sbjct: 129 YCKDLMTEKAEALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPD 188
Query: 222 KYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL 281
YT+++ + A AA D +G+++++ M+ D V DWT Y+ AS YV AGL +KA A L
Sbjct: 189 IYTYNVWMRALAARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEKAEAAL 248
Query: 282 RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLK 340
++ E N AY F+IT YA N +V RVW+ K+N + N Y+ +I +L
Sbjct: 249 KELEKWNTSNDLE-AYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQALAN 307
Query: 341 FDGMESAEKIFEEWESR----------------------------------NLCH---DI 363
+ AE F+EWE++ L H DI
Sbjct: 308 LKDLPGAEACFKEWEAQYINPPKTNTKAPGTAETSSNESDVKATKDKGTDGELKHPKYDI 367
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK----GVE 419
R+ N +I Y G+ +A + +A++RG N +TW + YL+ +
Sbjct: 368 RVANAMIKEYITEGMFDQAVAVKKRAKMRGGRLNAKTWEIFMEHYLKEGDLKMVHWCADR 427
Query: 420 AMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
A+KK AG W P E + Y++K +D++GA+ F+++L
Sbjct: 428 AIKKG---HSAGRIWVPPHEVTETLMDYFEKNKDVDGAEKFVEVL 469
>gi|297814019|ref|XP_002874893.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320730|gb|EFH51152.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 239/467 (51%), Gaps = 22/467 (4%)
Query: 29 YSTATGT--STREVTISLRKGSSMYKLYRMLSPMGDPND-------------SMVPLLDQ 73
+S A GT +T E + R G R + +G + S V + +
Sbjct: 17 FSAAAGTVDTTAEAAVKTRSGGGGAATNRKETVVGGRDTLGGRLLSLVYTKRSAVVTIRK 76
Query: 74 WVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQ 133
W EEG + +L I+++ R KR+ HAL+I WM + + L D A+ LDLI+K++
Sbjct: 77 WKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVLQEDIKLQAGDYAVHLDLISKIR 136
Query: 134 GIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
G+ A +F +P++++ + +LL++Y K ++KAE + ++M + G +K + YN M
Sbjct: 137 GLNSAEKFFEDLPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHM 196
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
++++ G ++K+ L+ E++ K D T+++ L+A A+ +D EG +K V + +
Sbjct: 197 LSMFISKGQFEKVSVLIKELKMK-TSPDIVTYNLWLTAFASGNDVEGAEK-VYLKAKESK 254
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDV 313
+ DW Y+ + Y K +KA L++ E L + K AY +I+ +A G+KD V
Sbjct: 255 LNPDWVTYSVLTNLYAKTDNLEKAKLALKEMEKL-VSKKNRVAYASLISLHANLGDKDGV 313
Query: 314 LRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
WK+ + + K N Y+ +IS+++K E A+ +++EWES + D RIPN ++
Sbjct: 314 NLTWKKVRSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAE 373
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGT 432
Y R + E + +G P+ TW ++ YL+ EK ++ +KA +++
Sbjct: 374 YMNRDEILLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDLEKVLDCFEKA---IDSVK 430
Query: 433 RWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLL 479
+W + + A +++ +++GA+ + LL ++ L + LL
Sbjct: 431 KWTVNVRLVKAVCKELEEQGNVKGAEKLMTLLQKAGHVNTQLYNSLL 477
>gi|17064738|gb|AAL32523.1| Unknown protein [Arabidopsis thaliana]
gi|27311917|gb|AAO00924.1| Unknown protein [Arabidopsis thaliana]
Length = 532
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 222/415 (53%), Gaps = 7/415 (1%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S V + +W EEG + +L I+++ R KR+ HAL+I WM + + L D A+
Sbjct: 76 SAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVH 135
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
LDLI+K++G+ A +F +P++++ + +LL++Y K ++KAE + ++M + G +K
Sbjct: 136 LDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLK 195
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
+ YN M+++Y G ++K+ L+ E++ + D T+++ L+A A+ +D EG +K+
Sbjct: 196 SCLPYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLWLTAFASGNDVEGAEKVY 254
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
+ ++ + DW Y+ + Y K +KA LR+ E L + K AY +I+ +A
Sbjct: 255 LKAKEEK-LNPDWVTYSVLTNLYAKTDNVEKARLALREMEKL-VSKKNRVAYASLISLHA 312
Query: 306 ACGNKDDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
G+KD V WK+ K + K N Y+ +IS+++K E A+ +++EWES + D R
Sbjct: 313 NLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDAR 372
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
IPN ++ Y R + E + +G P+ TW ++ YL+ EK ++ KA
Sbjct: 373 IPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKA 432
Query: 425 LVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLL 479
+++ +W + + +++ +++GA+ + LL ++ L + LL
Sbjct: 433 ---IDSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLL 484
>gi|449479004|ref|XP_004155478.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 259
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 145/219 (66%)
Query: 41 TISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFS 100
T SL S+ L+R + GDP S+V +LDQWVEEGR ++ L+ +IK+ R + RF+
Sbjct: 26 TKSLPSPSTEDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVNQSDLQKLIKQLRTFGRFN 85
Query: 101 HALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLN 160
HALQ+ W + N +P +AI+L LI+K +G+EQA YF+ + E + VY ALL+
Sbjct: 86 HALQLCEWERNERNKCPSPGHIAIQLHLISKARGLEQAEEYFSSIGESSRDHKVYGALLH 145
Query: 161 AYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
Y K+ +KAE IMQ+MR+ G +K + YN+M+N+Y Q G ++KLD L+ EMEE GI
Sbjct: 146 CYVENKNLKKAEAIMQKMREVGFMKTPLSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGH 205
Query: 221 DKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWT 259
+++T+++ ++A AAASD ++K+++ MEAD V DW+
Sbjct: 206 NRFTYNVRMNAYAAASDITNMEKLLSKMEADPLVATDWS 244
>gi|15235508|ref|NP_192191.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213327|sp|Q9SY07.1|PP302_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g02820, mitochondrial; Flags: Precursor
gi|4263527|gb|AAD15353.1| hypothetical protein [Arabidopsis thaliana]
gi|7269767|emb|CAB77767.1| hypothetical protein [Arabidopsis thaliana]
gi|332656833|gb|AEE82233.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 532
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 222/415 (53%), Gaps = 7/415 (1%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S V + +W EEG + +L I+++ R KR+ HAL+I WM + + L D A+
Sbjct: 76 SAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVH 135
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
LDLI+K++G+ A +F +P++++ + +LL++Y K ++KAE + ++M + G +K
Sbjct: 136 LDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLK 195
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
+ YN M+++Y G ++K+ L+ E++ + D T+++ L+A A+ +D EG +K+
Sbjct: 196 SCLPYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLWLTAFASGNDVEGAEKVY 254
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
+ ++ + DW Y+ + Y K +KA L++ E L + K AY +I+ +A
Sbjct: 255 LKAKEEK-LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKL-VSKKNRVAYASLISLHA 312
Query: 306 ACGNKDDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
G+KD V WK+ K + K N Y+ +IS+++K E A+ +++EWES + D R
Sbjct: 313 NLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDAR 372
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
IPN ++ Y R + E + +G P+ TW ++ YL+ EK ++ KA
Sbjct: 373 IPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKA 432
Query: 425 LVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLL 479
+++ +W + + +++ +++GA+ + LL ++ L + LL
Sbjct: 433 ---IDSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLL 484
>gi|125575301|gb|EAZ16585.1| hypothetical protein OsJ_32057 [Oryza sativa Japonica Group]
Length = 400
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 204/435 (46%), Gaps = 79/435 (18%)
Query: 54 YRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKS 113
Y+ L MG N+S L + +P +++ IIK +RFS ALQ+SMWMT++
Sbjct: 11 YKDLKSMGSSNNSFNGALAEERHVAKP----EVQSIIKYLCRRRRFSQALQLSMWMTERL 66
Query: 114 NFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEI 173
+ L+P DVA RL+LI KV G+++A YF+ +P++LK Y +LL YA A EKAE
Sbjct: 67 HLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEE 126
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ ++MR G+ + YN MM +Y Q G +++ S+ MEE
Sbjct: 127 LFEKMRGMGMAS-SYAYNVMMRLYLQNGQVERVHSMHQAMEES----------------- 168
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF 293
G+V D + T +AVLRK + L+
Sbjct: 169 -------------------GIVPDVSTTHTL-------------VAVLRKKKTLVAAYVV 196
Query: 294 S---RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKI 350
+ +A + V+ + +C N Y+C I LLK + M AEK
Sbjct: 197 AEDIKAIENVLEKANSC--------------------NSMYMCRIGVLLKMNDMVGAEKA 236
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+EEWES+++ HD R+ N L+DAYC+ GL+ KAE L+ + +G P T Y +A GY +
Sbjct: 237 YEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKLAGGYFK 296
Query: 411 NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEII 470
Q K + KKAL A W P + L Y+ +++++E A+ + LL
Sbjct: 297 VGQVSKAADLTKKALA--SASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTP 354
Query: 471 SADLQDRLLNNIRNG 485
+ D+ LL N
Sbjct: 355 TRDIYHGLLKTYVNA 369
>gi|224141193|ref|XP_002323959.1| predicted protein [Populus trichocarpa]
gi|222866961|gb|EEF04092.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 178/321 (55%), Gaps = 6/321 (1%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S+ ++D+WV EG + +LR I K+ R +RF HAL+IS WM F L+ D
Sbjct: 20 PKRSVTNVIDKWVREGNTVSSSELRHISKELRKSQRFKHALEISEWMVAHEEFELSDTDH 79
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A R+DL+ KV G++ A YF+ +P K Y ALL++YA AK EKAE ++++
Sbjct: 80 ASRIDLMTKVFGVDAAERYFDGLPLAAKTTETYTALLHSYAAAKLIEKAEEFYKRIKGSN 139
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
L + YN MM +Y G +K+ ++ E++ + + D +T+++ +S+CAAA + + +
Sbjct: 140 LPFTALMYNEMMTLYMSVGQLEKVSQVVEELKHQKVAPDIFTYNLWISSCAAALNIDKVR 199
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGL---SDKALAVLRKSEVLMMHNKFSRAYDF 299
+I+ M D GV DW Y + YV AG ++ + A + ++E + ++ YDF
Sbjct: 200 RILDEMSQDSGVNDDWMRYIKIVNIYVTAGHLVNAESSTAAVVEAEKKITQREWI-TYDF 258
Query: 300 VITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEW-ESR 357
++ YA G KD + ++WK + N K+ +R ++C++SS L ++ +I ++W +S
Sbjct: 259 LVILYAGLGKKDKIDQIWKSLRMTNQKMTSRNFVCILSSYLMLGHLKEVGEIVDQWKQST 318
Query: 358 NLCHDIRIPNHLIDAYCRRGL 378
DI N L+DA GL
Sbjct: 319 TTDFDISACNRLLDAISCLGL 339
>gi|413953408|gb|AFW86057.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 596
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 223/466 (47%), Gaps = 59/466 (12%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LYR L G ++ +D +++ + ++ + +++ R + +L++S M ++
Sbjct: 81 LYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRMRRNALYRPSLKLSEVMARR 140
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
T +D AIRLDLIAK +GI A YF +PE K Y ALLN+Y EKAE
Sbjct: 141 G-MNPTVSDQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAE 199
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+M++M++ + +NS+M +Y + +K+ S++ +M+ + D +T+++ + A
Sbjct: 200 SLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYNVWMRAL 259
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
AA D G+++++ M+ D V DWT Y+ AS YV+AG+ +KA A L++ E N
Sbjct: 260 AALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAALKELEKRNTSND 319
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIF 351
AY F+IT Y N +V RVW+ K+ N ++ N Y+ +I L + +AE F
Sbjct: 320 IE-AYQFLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSAAEACF 378
Query: 352 EEWESRNLC-------------------------------------------------HD 362
+EWE+R++ +D
Sbjct: 379 KEWEARHIHPPKTNTKGSGADNTPGADPKSPSNPPNNQSGTKETGDETAEDLQPKHPKYD 438
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV---- 418
IR+ N +I AY G+L KA + +A++RG N +TW + YL+ +
Sbjct: 439 IRVANAMIKAYITEGMLDKAVAMKKRAKMRGGRLNAKTWEIFMEHYLKTGDLKMAHWCAD 498
Query: 419 EAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
AMKK +G W P + Y+++ +D++GA+ ++ L
Sbjct: 499 RAMKKG---HSSGRIWVPPPAVTETLMSYFEENKDVDGAERYVGAL 541
>gi|359484901|ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial [Vitis vinifera]
Length = 396
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 180/329 (54%), Gaps = 10/329 (3%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S+ +L +W+ EG + + +LR I K+ R +R+ HAL+IS WM F L+ +D
Sbjct: 56 PKRSVTNVLQRWLGEGNQVHISELRNISKELRRAQRYKHALEISEWMVSHDEFELSDSDN 115
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A+R+DL+ +V GI+ A YF +P K Y ALL++YA AK AEKAE + +++++
Sbjct: 116 AVRIDLMTRVFGIDAAERYFEGLPSAAKTSETYTALLHSYAGAKLAEKAEELYERIKESN 175
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ + YN MM +Y G +K+ ++ E++ + + D +T+++ +S+CAA D +G+
Sbjct: 176 VPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYNLWVSSCAATLDIDGVR 235
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAG-LSDKALAVLRKSEVLMMHNKFSR---AYD 298
+I+ M + W Y A+ Y+ AG L + A S V N R YD
Sbjct: 236 RILKEMSNNSSANDGWVRYRNLANIYIMAGHLVNSA----SNSVVEAGTNTTQRDWITYD 291
Query: 299 FVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEW-ES 356
F+I YA GNKD + ++WK K K+ +R Y+C++SS + ++ + +EW +S
Sbjct: 292 FLIILYAGLGNKDKIDQIWKSLKMTKQKIKSRSYVCILSSYVMLGHIKDVGIVIDEWKKS 351
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
DI + L+DA+ L+ +AET
Sbjct: 352 TTTDFDISVFYRLLDAFAELRLIEEAETF 380
>gi|293336604|ref|NP_001168600.1| uncharacterized protein LOC100382384 [Zea mays]
gi|223949449|gb|ACN28808.1| unknown [Zea mays]
Length = 536
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 223/466 (47%), Gaps = 59/466 (12%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LYR L G ++ +D +++ + ++ + +++ R + +L++S M ++
Sbjct: 21 LYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRMRRNALYRPSLKLSEVMARR 80
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
T +D AIRLDLIAK +GI A YF +PE K Y ALLN+Y EKAE
Sbjct: 81 G-MNPTVSDQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAE 139
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+M++M++ + +NS+M +Y + +K+ S++ +M+ + D +T+++ + A
Sbjct: 140 SLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYNVWMRAL 199
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
AA D G+++++ M+ D V DWT Y+ AS YV+AG+ +KA A L++ E N
Sbjct: 200 AALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAALKELEKRNTSND 259
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIF 351
AY F+IT Y N +V RVW+ K+ N ++ N Y+ +I L + +AE F
Sbjct: 260 IE-AYQFLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSAAEACF 318
Query: 352 EEWESRNLC-------------------------------------------------HD 362
+EWE+R++ +D
Sbjct: 319 KEWEARHIHPPKTNTKGSGADNTPGADPKSPSNPPNNQSGTKETGDETAEDLQPKHPKYD 378
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV---- 418
IR+ N +I AY G+L KA + +A++RG N +TW + YL+ +
Sbjct: 379 IRVANAMIKAYITEGMLDKAVAMKKRAKMRGGRLNAKTWEIFMEHYLKTGDLKMAHWCAD 438
Query: 419 EAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
AMKK +G W P + Y+++ +D++GA+ ++ L
Sbjct: 439 RAMKKG---HSSGRIWVPPPAVTETLMSYFEENKDVDGAERYVGAL 481
>gi|168006155|ref|XP_001755775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693094|gb|EDQ79448.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 429
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 121/357 (33%), Positives = 193/357 (54%), Gaps = 4/357 (1%)
Query: 103 LQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAY 162
++IS WM + AD +R+DL +K++ A P + K Y LL Y
Sbjct: 1 MEISDWMALEKGTKWELADNIVRIDLKSKMKQFTVAEQLLENSPPEFKTELAYHTLLKNY 60
Query: 163 ACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDK 222
+ A+KA ++++++ GL+ +N MM +Y + G KL ++ +M+ G+ D
Sbjct: 61 VDHQMAQKAGALLEKLKSTGLLTLPFSFNQMMLLYKRKGMENKLPEILEDMKAHGVPKDV 120
Query: 223 YTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR 282
YT++IL+ + + D EG++KI ++AD V D + T A+ V AGL +KA L+
Sbjct: 121 YTYNILMDVKSRSGDIEGMEKIFEELKADENVKADAATFGTLATACVHAGLLEKAKVYLK 180
Query: 283 KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFD 342
+ E + S AYD +I+QY A G+ D V RVW++ K V NR YI VI + K
Sbjct: 181 EMEEGDIFRNRS-AYDILISQYGAVGDVDGVERVWEKVKSGPIVSNRSYITVIEAFGKLG 239
Query: 343 GMESAEKIFEEW-ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+E AE+++E +S+ L R N L+ AY R+GL+ KAE L+ + G + N T+
Sbjct: 240 MVEKAEELYEVMSQSKGLILS-RQFNSLLSAYTRQGLMDKAEKLMDDMEKLGRKKNAITY 298
Query: 402 YLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
+ + TGYL+ +Q +K V AMK+ALV + G R KP E L A L + + ++ A+
Sbjct: 299 HHLVTGYLKTDQLDKAVAAMKEALVDPKQG-RSKPWFETLVAVLDAFAERGNVVNAE 354
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 81/187 (43%), Gaps = 38/187 (20%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQM-RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
YI ++ A+ EKAE + + M + +GL+ + +NS+++ Y + G K + LM +M
Sbjct: 228 YITVIEAFGKLGMVEKAEELYEVMSQSKGLIL-SRQFNSLLSAYTRQGLMDKAEKLMDDM 286
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E+ G + T+ L++ GY+K
Sbjct: 287 EKLGRKKNAITYHHLVT------------------------------------GYLKTDQ 310
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
DKA+A ++++ V + ++ ++ A + +V+ +++++ K Y R I
Sbjct: 311 LDKAVAAMKEALVDPKQGRSKPWFETLVAVLDAFAERGNVVNAEQQFQEIKKAYPRLNIQ 370
Query: 334 VISSLLK 340
V + LLK
Sbjct: 371 VYNILLK 377
>gi|413953409|gb|AFW86058.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 626
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 194/401 (48%), Gaps = 58/401 (14%)
Query: 118 TPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQ 177
T +D AIRLDLIAK +GI A YF +PE K Y ALLN+Y EKAE +M++
Sbjct: 175 TVSDQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAESLMEK 234
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
M++ + +NS+M +Y + +K+ S++ +M+ + D +T+++ + A AA D
Sbjct: 235 MKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYNVWMRALAALKD 294
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY 297
G+++++ M+ D V DWT Y+ AS YV+AG+ +KA A L++ E N AY
Sbjct: 295 IPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAALKELEKRNTSNDIE-AY 353
Query: 298 DFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWES 356
F+IT Y N +V RVW+ K+ N ++ N Y+ +I L + +AE F+EWE+
Sbjct: 354 QFLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSAAEACFKEWEA 413
Query: 357 RNLC-------------------------------------------------HDIRIPN 367
R++ +DIR+ N
Sbjct: 414 RHIHPPKTNTKGSGADNTPGADPKSPSNPPNNQSGTKETGDETAEDLQPKHPKYDIRVAN 473
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV----EAMKK 423
+I AY G+L KA + +A++RG N +TW + YL+ + AMKK
Sbjct: 474 AMIKAYITEGMLDKAVAMKKRAKMRGGRLNAKTWEIFMEHYLKTGDLKMAHWCADRAMKK 533
Query: 424 ALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
+G W P + Y+++ +D++GA+ ++ L
Sbjct: 534 G---HSSGRIWVPPPAVTETLMSYFEENKDVDGAERYVGAL 571
>gi|297835552|ref|XP_002885658.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
gi|297331498|gb|EFH61917.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
Length = 737
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 178/326 (54%), Gaps = 12/326 (3%)
Query: 67 MVPLLDQW---VEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA 123
+ +L+QW E+G+ L+ +R +++ R +R AL++S WM + L P D
Sbjct: 38 ITTVLEQWRQQQEQGKQLNPSLVRGVVENLRDSQRCREALEVSNWMIVQKICNLIPEDFT 97
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
R LI V G+E+A ++ +PE L+ S+Y +LL++Y +KAE ++MR+ GL
Sbjct: 98 TRFHLIENVFGLEEAGNFVESIPENLRNESIYNSLLSSYVRRNDLDKAESTFKKMRELGL 157
Query: 184 VKKTIDYNSMMNVYYQT--GNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
+ + YNSM ++Y + GN K+D ++ EM+E I D+ T + L A + +
Sbjct: 158 LLRASPYNSMTSLYRRIPHGNRCKVDEILREMKESNIKLDRDTVNNALRVYADVTHIATM 217
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVI 301
+K +A E + LDW A Y+++G KA +LR++E L + ++Y+ ++
Sbjct: 218 EKFLAEWEGN--TPLDWLTRLDMAKAYLRSGFKGKAKEMLRRTEEL----RDPKSYEELM 271
Query: 302 TQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKI-FEEWESRNLC 360
Y G + DV RVW YK+ K N G+ +I SLLK D + AE+ ++EWE L
Sbjct: 272 RLYGEAGGRKDVYRVWDLYKKLSKKDNEGFRALIGSLLKLDDINGAEEFYYKEWECSGLP 331
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLI 386
D+RIP L+ +Y +G++ KA+ LI
Sbjct: 332 FDVRIPTMLVSSYREKGMVEKADKLI 357
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 169/342 (49%), Gaps = 45/342 (13%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRL 126
+ PLL+ +G + +LR +IK +F AL+ S WM+ K++F L P D A RL
Sbjct: 370 ITPLLESLERKGNVVKPSELRDLIKNLCDSNQFYKALEASKWMSTKTSFNLFPQDYAARL 429
Query: 127 DLIAKVQGIEQAASYFN-CVPEKLKLPSVYIALLNAYACA-KSAEKAEIIMQQMRDRGLV 184
+I V G E+A +F +PE +K VY LL+ YA + K+ +KAE I ++M D G +
Sbjct: 430 HMIENVLGFEEAEKFFERSIPENMKDDYVYGTLLSCYAKSHKTLDKAEAIFEKMGDLGFL 489
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI 244
K +NSM+++Y Q G +K+++L+ +M+ I+ D T + +L A +D + +DK
Sbjct: 490 SKPSPFNSMISLYSQLGKREKVENLISKMKCMNIEPDSLTMNNVLRMYADETDIKTMDKY 549
Query: 245 V-AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ 303
+ A++ L+ A+ Y +AGL KA+ + R
Sbjct: 550 KREWINAEKNTKLEMRTMVAMANAYERAGLLLKAIEITR--------------------- 588
Query: 304 YAACGNKDDVLRVWKRYKQNLK----------------VYNRGYICVISSLLKFDGMESA 347
+K++V R+W YK+ K V + Y VISSLLK D ++ A
Sbjct: 589 -----SKNEVHRLWNEYKEKEKRNYKIDDANLCKCRSAVGDEEYQSVISSLLKLDDLKGA 643
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
E+I+ EWE + RIP +I YC+ G K ++Y +
Sbjct: 644 EEIYGEWEPEGPEFNTRIPCLIISRYCKEGDEVKVREVVYSS 685
>gi|255563224|ref|XP_002522615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538091|gb|EEF39702.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 426
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 173/320 (54%), Gaps = 6/320 (1%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S ++ WV EG + +LR I + R +R+ HAL+IS WM F L D
Sbjct: 86 PKRSATNIIHNWVSEGNTVTASELRNISNELRKLQRYKHALEISEWMVTNKEFELMDFDY 145
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A R+DL+ KV GI+ A YF +P +K Y ALL++YA K KAE + ++++
Sbjct: 146 ATRIDLMTKVFGIDAAERYFEGLPITVKTSETYTALLHSYAGVKQLGKAEELYERIKGSN 205
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
L + YN MM +Y G +K+ ++ E++ + I D +T+++ +S+CAA + + +
Sbjct: 206 LSFTALTYNEMMTLYMSVGQVEKVSLVVEELKRQKIAPDIFTYNLWISSCAAILNIDQVT 265
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAG--LSDKALAVLRKSEVLMMHNKFSRAYDFV 300
+I+ M+ D G DW Y A+ YVKAG ++ ++ AV+ + + + YDF+
Sbjct: 266 RILDEMKHDSGCNDDWLRYIDIANIYVKAGHLVNTESSAVVEAEKSITQREWIT--YDFL 323
Query: 301 ITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEW-ESRN 358
I YA +KD V ++WK + K+ NR ++C++SS + ++ A ++ ++W +S
Sbjct: 324 IILYAGLRDKDKVDQIWKSLRMTKQKMTNRNFVCILSSYMMLGHLKEAGEVLDQWKKSTT 383
Query: 359 LCHDIRIPNHLIDAYCRRGL 378
D+ + L+DA+ GL
Sbjct: 384 TDFDLSACSRLLDAFSGSGL 403
>gi|356525847|ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 395
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 163/295 (55%), Gaps = 3/295 (1%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S +L +WV +G P+ + QLR I K+ R +R+ HAL+IS WM + L+ +D
Sbjct: 57 PKRSATNVLQKWVLQGNPVTLSQLRDISKELRRSQRYKHALEISEWMVSHEEYELSDSDY 116
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A R+DL KV GI+ A YF +P K Y ALL++YA AK +KAE + Q+++D
Sbjct: 117 AARIDLTTKVFGIDAAERYFEGLPLATKTAETYTALLHSYAGAKLTKKAEELYQRIKDSN 176
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
L + YN MM +Y G ++K+ S++ E++++ + D +T+++ +S CAA + + +
Sbjct: 177 LSFDALTYNEMMTLYMSVGQFEKVPSVVEELKQQKVSPDIFTYNLWISYCAAILNIDEVR 236
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALA-VLRKSEVLMMHNKFSRAYDFVI 301
+I+ M G W Y A+ Y+ G D A + L ++E + ++ YDF+I
Sbjct: 237 RILDEMSHGAGSNESWIRYLNLANIYISVGHLDNASSNTLVETEKRITQRQWI-TYDFLI 295
Query: 302 TQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
Y G+KD + ++W + K+ +R YIC+ISS L + ++ ++W+
Sbjct: 296 ILYGGLGSKDKLDQIWNSLRMTKQKMISRNYICIISSYLMLGHTKEVGEVIDQWK 350
>gi|449438238|ref|XP_004136896.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
gi|449478839|ref|XP_004155431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
Length = 406
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 185/338 (54%), Gaps = 6/338 (1%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S + +L++W EG + + +LR I K+ R +R+ HAL+I WM + L+ +D
Sbjct: 68 PKRSAIRVLERWTSEGNQVTIAELRNISKELRKIQRYKHALEILEWMVSHNQSELSDSDF 127
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
AIR+DL+ KV G++ A YF +P K Y ALL+++A +K +KAE + ++M++
Sbjct: 128 AIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAETLYEKMKESD 187
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ + +N MM +Y G +K+ S++ +++++ + D +T+++ +S+ AAA + +G+
Sbjct: 188 IPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVK 247
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAG--LSDKALAVLRKSEVLMMHNKFSRAYDFV 300
+I+ M + +W Y + YVK+ L ++ +V+ V + + YD +
Sbjct: 248 QILNEMNHNPNSNENWVRYIELVNIYVKSANLLHSESNSVVES--VSGISQREWITYDLL 305
Query: 301 ITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEW-ESRN 358
I YA GNKD + ++W+ + K+ +R YIC++S L D ++ ++ ++W +S
Sbjct: 306 IILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVIDQWKQSTT 365
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
DI N L++A+ GL KA + + + EP
Sbjct: 366 TDFDISSCNRLVNAFIEAGLHEKANSFVNVLIQKNCEP 403
>gi|242091818|ref|XP_002436399.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
gi|241914622|gb|EER87766.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
Length = 536
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 218/466 (46%), Gaps = 59/466 (12%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LYR L G ++ +D +++ + ++ + +++ R + AL++S MT++
Sbjct: 21 LYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRMRRNALYRPALKLSEVMTRR 80
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
T +D AI LDLIAK +GI A YF +PE K Y ALLN+Y EKAE
Sbjct: 81 G-MNPTVSDQAICLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAE 139
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+M +M + + +NS+M +Y + +K+ ++ M+ + +T+++ + A
Sbjct: 140 SLMAKMSELNFAFTAMPFNSLMTMYTKVNQPEKVPGIIQYMKADDVLPHVFTYNVWMRAL 199
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
AA +D G+++++ M+ D V DWT Y+ AS YV AGL +KA A L++ E N
Sbjct: 200 AALNDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVDAGLFEKAEAALKELEKRNTSND 259
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIF 351
AY F+IT Y N +V RVW+ K+ N ++ N Y+ +I L + +AE F
Sbjct: 260 VE-AYQFLITLYGRTQNLVEVHRVWRSLKRNNPRMANMSYLNMIQVLANLKDLPAAEACF 318
Query: 352 EEWESRNLC-------------------------------------------------HD 362
+EWE+R++ +D
Sbjct: 319 KEWEARHIHPPKTKAKDSGADNISTTDPESSSNLPNNQSGIKETGDEAAKDLQLKHPKYD 378
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV---- 418
IR+ N +I AY G+L KA + +A++ G N +TW + +L+ +
Sbjct: 379 IRVANAMIKAYIAEGMLDKAVAVKKRAKMHGGRLNAKTWEIFMEHHLKTGDLKMAHWCAD 438
Query: 419 EAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
AMKK +G W P + Y+++ +D++GA+ +++ L
Sbjct: 439 RAMKKG---HSSGRIWVPPPAVTETLMSYFEENKDVDGAEQYVESL 481
>gi|356554749|ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 399
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 166/297 (55%), Gaps = 7/297 (2%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S +L +WV +G P+ + QLR I K+ R +R+ HAL+IS WM + L+ +D
Sbjct: 61 PKRSATNVLQKWVLQGNPITLSQLRDISKELRRSQRYKHALEISEWMVSNEEYELSDSDY 120
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A+R+DL+ +V GI+ A YF +P K Y ALL++YA AK EKAE + Q+++D
Sbjct: 121 AVRIDLMTQVFGIDAAERYFEGLPLATKTTETYTALLHSYAGAKLTEKAEELYQRIKDSN 180
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
L + YN MM +Y G ++K+ ++ E++++ + D +T+++ +S+CAA + + +
Sbjct: 181 LSFDALTYNEMMTLYMSVGQFEKVPIVVEELKQQKVSPDIFTYNLWISSCAAILNIDEVR 240
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVK-AGLSDKALAVLRKSEVLMMHNKFSRAYDFVI 301
+I+ M G W Y A+ Y+ A L + + L ++E + ++ YDF+I
Sbjct: 241 RILDEMSHGAGSNESWIRYLNLANIYISVAHLDNASSNTLVETEKRITQRQWI-TYDFLI 299
Query: 302 TQYAACGNKDDVLRVWKRY---KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
Y G+KD + ++W KQ K+ +R Y+C+ISS L + ++ ++W+
Sbjct: 300 ILYGGLGSKDKLDQIWNSLGMTKQ--KMISRNYMCIISSYLMLGLTKEVGEVIDQWK 354
>gi|388490914|gb|AFK33523.1| unknown [Lotus japonicus]
Length = 358
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 157/279 (56%), Gaps = 3/279 (1%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S +L +WV EG + + +LR I K+ R +R+ HAL+IS WM L+ +D
Sbjct: 62 PKRSATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDY 121
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A+R+DL+ KV GI+ A YF +P K Y ALL++YA AK EKAE + Q+++D
Sbjct: 122 AMRIDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSN 181
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
L + YN MM +Y G +K+ S++ E++++ + D +T+++ +S+CAA + + +
Sbjct: 182 LSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVR 241
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAG-LSDKALAVLRKSEVLMMHNKFSRAYDFVI 301
+I+ M WT Y A+ YV A L + + L ++E + +++ YDF+I
Sbjct: 242 RILDEMSHGADSNESWTRYLNLANVYVTASRLDNSSSNSLAETEKRITQSQWI-TYDFLI 300
Query: 302 TQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLL 339
YA G+KD + ++W + K+ NR Y C+IS+ L
Sbjct: 301 ILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYL 339
>gi|22165078|gb|AAM93695.1| putative leaf protein [Oryza sativa Japonica Group]
Length = 372
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 180/385 (46%), Gaps = 75/385 (19%)
Query: 104 QISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYA 163
Q+SMWMT++ + L+P DVA RL+LI KV G+++A YF+ +P++LK Y +LL YA
Sbjct: 29 QLSMWMTERLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYA 88
Query: 164 CAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKY 223
A EKAE + ++MR G+ + YN MM +Y Q G +++ S+ MEE
Sbjct: 89 EANCVEKAEELFEKMRGMGMAS-SYAYNVMMRLYLQNGQVERVHSMHQAMEES------- 140
Query: 224 TFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
G+V D + T +AVLRK
Sbjct: 141 -----------------------------GIVPDVSTTHTL-------------VAVLRK 158
Query: 284 SEVLMMHNKFS---RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLK 340
+ L+ + +A + V+ + +C N Y+C I LLK
Sbjct: 159 KKTLVAAYVVAEDIKAIENVLEKANSC--------------------NSMYMCRIGVLLK 198
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
+ M AEK +EEWES+++ HD R+ N L+DAYC+ GL+ KAE L+ + +G P T
Sbjct: 199 MNDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANT 258
Query: 401 WYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYF 460
Y +A GY + Q K + KKAL A W P + L Y+ +++++E A+
Sbjct: 259 CYKLAGGYFKVGQVSKAADLTKKALA--SASNEWIPDLTNVLMSLNYFAEQKNVEAAEEM 316
Query: 461 IKLLTGKEIISADLQDRLLNNIRNG 485
+ LL + D+ LL N
Sbjct: 317 MSLLQRLVTPTRDIYHGLLKTYVNA 341
>gi|297829684|ref|XP_002882724.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328564|gb|EFH58983.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 518
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 184/361 (50%), Gaps = 41/361 (11%)
Query: 36 STREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGR----PLDMEQLRIIIK 91
S R T+S G++ L R+ S D ++ +L++W ++ + L+ ++ I++
Sbjct: 26 SYRNGTLS-SPGTNQTLLSRIESA-ADQKAAITTVLEEWRQQQKHGNHQLNPSLVKGIVE 83
Query: 92 KFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKL 151
K KR+ AL++S WM +K P D+A+R LI V G+E+A +F +PE LK
Sbjct: 84 KLHDSKRYRQALEVSNWMIEKKICNHLPEDLAVRFHLIENVLGLEEAEKFFQSIPENLKG 143
Query: 152 PSVYIALLNAYACAK--SAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
S+Y +LL +YA + S KAE ++MR G++ + YNSM+++Y N K+D +
Sbjct: 144 ESIYTSLLKSYAKSGEISLRKAEYTFEKMRKLGMLLRPSPYNSMVSLYSSLRNRNKVDEI 203
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+ EM+E ++ D T + L AA D +DK +A DW
Sbjct: 204 LREMKENNLELDSPTVNNALRVYAAVCDVATMDKFLA----------DWN---------- 243
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
A+ L L M ++AY +I Y G ++DV R+W YK + N
Sbjct: 244 -------AITTLEWLTTLEM----AKAYR-LIRLYGEAGEREDVYRIWDLYKNTKEKDNE 291
Query: 330 GYICVISSLLKFDGMESAEKI-FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
G+ +I SLLK D + AEKI ++EWES L D+RIP L+ Y +G++ KA+ L+YK
Sbjct: 292 GFRALIGSLLKLDDINGAEKIYYDEWESSGLEFDLRIPTMLMSGYRAKGMVKKADKLLYK 351
Query: 389 A 389
Sbjct: 352 T 352
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S+ P +++ V+ + LR +IK R + S AL+ S WM +K F L P D AIR
Sbjct: 361 SINPFVEELVKNRNQVKPSDLRDLIKNLRDSNQLSKALEASTWMCEKRGFNLFPEDYAIR 420
Query: 126 LDLIAKVQGIEQAASYF-NCVPEKLKLPSVYIALLNAYACA-KSAEKAEIIMQQMRDRGL 183
LI KV G+E+A +F + +P+ +K SVY LL +Y + K+ KAE + ++MR+ G
Sbjct: 421 FHLIEKVLGLEEAEKFFESSIPKNMKDYSVYDTLLTSYTRSDKTLVKAEGVFEKMRELGF 480
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGI 218
+ K +NS++++Y + K++ L+ +M++ I
Sbjct: 481 LSKLSPFNSIISLYIEQRKLSKVNKLLCDMKQNNI 515
>gi|242073288|ref|XP_002446580.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
gi|241937763|gb|EES10908.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
Length = 415
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 168/326 (51%), Gaps = 3/326 (0%)
Query: 60 MGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTP 119
+G S LD+W EGR +LR I + +R+ HAL+++ WM L+
Sbjct: 70 LGLAKRSATAALDKWSGEGRAAPAAELRRIARDLSRVRRYKHALEVADWMKTHHESDLSE 129
Query: 120 ADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMR 179
+D +R+DLI KV G A +F +P K Y ALL++Y +K +KAE + ++M+
Sbjct: 130 SDYGMRIDLITKVFGASAAEDFFEKLPPGAKSLEAYTALLHSYGRSKMTDKAERLFERMK 189
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
D L + YN MM +Y G K++ + E++ + + D +T+++ +SA AA+ D E
Sbjct: 190 DANLSMDALVYNEMMTLYISVGELDKVEIIAEELKRQNVSPDLFTYNLRVSAAAASMDLE 249
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
G I+ M D WT+Y AS YV A + L ++E + ++ YDF
Sbjct: 250 GFKGILDEMSKDPNSKEGWTLYRNLASVYVDASQLVGSGNSLVEAEAKISQREWI-TYDF 308
Query: 300 VITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE-SR 357
++ +A GN++ + +WK + ++ +R YICVISS L ++ A +I ++W+ S+
Sbjct: 309 LVILHAGLGNQERIKDIWKSMVMTSQRMTSRNYICVISSYLMCGQLKDAGEIVDQWQRSK 368
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAE 383
DI N L+DA GL A+
Sbjct: 369 APEFDISACNRLLDALLSAGLTDTAD 394
>gi|78708864|gb|ABB47839.1| expressed protein [Oryza sativa Japonica Group]
gi|215701127|dbj|BAG92551.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 341
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 177/382 (46%), Gaps = 75/382 (19%)
Query: 107 MWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAK 166
MWMT++ + L+P DVA RL+LI KV G+++A YF+ +P++LK Y +LL YA A
Sbjct: 1 MWMTERLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEAN 60
Query: 167 SAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFS 226
EKAE + ++MR G+ + YN MM +Y Q G +++ S+ MEE
Sbjct: 61 CVEKAEELFEKMRGMGMAS-SYAYNVMMRLYLQNGQVERVHSMHQAMEES---------- 109
Query: 227 ILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV 286
G+V D + T +AVLRK +
Sbjct: 110 --------------------------GIVPDVSTTHTL-------------VAVLRKKKT 130
Query: 287 LMMHNKFS---RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDG 343
L+ + +A + V+ + +C N Y+C I LLK +
Sbjct: 131 LVAAYVVAEDIKAIENVLEKANSC--------------------NSMYMCRIGVLLKMND 170
Query: 344 MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYL 403
M AEK +EEWES+++ HD R+ N L+DAYC+ GL+ KAE L+ + +G P T Y
Sbjct: 171 MVGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYK 230
Query: 404 MATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKL 463
+A GY + Q K + KKAL A W P + L Y+ +++++E A+ + L
Sbjct: 231 LAGGYFKVGQVSKAADLTKKALA--SASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSL 288
Query: 464 LTGKEIISADLQDRLLNNIRNG 485
L + D+ LL N
Sbjct: 289 LQRLVTPTRDIYHGLLKTYVNA 310
>gi|115436130|ref|NP_001042823.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|57899055|dbj|BAD87829.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532354|dbj|BAF04737.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|222618277|gb|EEE54409.1| hypothetical protein OsJ_01440 [Oryza sativa Japonica Group]
Length = 484
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 208/417 (49%), Gaps = 20/417 (4%)
Query: 53 LYRMLSPMGDP--NDSMVPLLDQWVEEGR--PLDMEQLRIIIKKFRLYKRFSHALQISMW 108
L R L +GD S+ +LD+WV EGR + L + KR +HAL++ W
Sbjct: 46 LGRRLLELGDAAGEGSVSRVLDEWVREGREEAIAAADLAKCARDLHKVKRDAHALELMDW 105
Query: 109 MTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAK 166
M +T A A+ L+L+ V GIE A YF+ +P + + Y ALLN Y AK
Sbjct: 106 MVNTKGMSMTYARYALHLELLYSVYGIEAAEEYFSGIPSFTRDQNHRTYGALLNCYCSAK 165
Query: 167 SAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFS 226
EKA I ++M + G+ T N++M +Y + G + K+ +L EM+E+ + D+ T
Sbjct: 166 MEEKATNIYRRMDELGIPSSTKLMNNLMGLYLELGQHSKVANLFDEMKERNVQPDELTCC 225
Query: 227 ILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA-LAVLRKSE 285
IL+ + AA + + + + M V W+++ T S Y+ AG+ ++A LA +R E
Sbjct: 226 ILMRSHAAHNKIDTVKETFYNMSL-LDVPKQWSIFRTLGSIYMNAGMVEEAELAFMRAQE 284
Query: 286 VLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR---GYICVISSLLKFD 342
L + Y F++ Q+A+ GN V RVWK K YNR Y+ ++ L K
Sbjct: 285 FLGFDHGRHPFY-FLMRQFASIGNLRGVNRVWKDIKMTFS-YNRTNFSYLLMLQCLYKLG 342
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
+ ++I++EWE R +D R+ N L A+ R G+ ++AE L K + RG + + T
Sbjct: 343 DTDRMKEIYKEWEYRYENYDPRLTNMLTRAHLRNGMTNEAELLWEKVKERGGDFDFETCE 402
Query: 403 LMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAAC--LGYYKKERDIEGA 457
L YL + ++ +K L + K K+ C L ++++++ +EGA
Sbjct: 403 LFREHYLGKGDTTSALKWAEKMTKLPK-----KQGKQDQETCKFLKWFEEDKVVEGA 454
>gi|18415979|ref|NP_568214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75165070|sp|Q94B59.1|PP372_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g09450, mitochondrial; Flags: Precursor
gi|14596093|gb|AAK68774.1| putative protein [Arabidopsis thaliana]
gi|27311913|gb|AAO00922.1| putative protein [Arabidopsis thaliana]
gi|332004012|gb|AED91395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 409
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 165/319 (51%), Gaps = 3/319 (0%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S +L++W+ EG + + +LR I K+ R +R+ HAL+++ WM + ++ AD
Sbjct: 67 PKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQHEESKISDADY 126
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQ-MRDR 181
A R+DLI+KV GI+ A YF + K Y +LL+AYA +K E+AE + ++ +
Sbjct: 127 ASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESD 186
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
L I YN MM +Y G +K+ ++ +++K + D +T+++ LS+CAA + + +
Sbjct: 187 SLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDEL 246
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVI 301
KI+ M D W Y S Y+ + A + L + + YDF++
Sbjct: 247 RKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLM 306
Query: 302 TQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEW-ESRNL 359
+ GNK + ++WK + N + +R YICV+SS L + AE+I +W ES+
Sbjct: 307 ILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTT 366
Query: 360 CHDIRIPNHLIDAYCRRGL 378
D +++A+ GL
Sbjct: 367 EFDASACLRILNAFRDVGL 385
>gi|21592522|gb|AAM64472.1| unknown [Arabidopsis thaliana]
Length = 409
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 165/319 (51%), Gaps = 3/319 (0%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S +L++W+ EG + + +LR I K+ R +R+ HAL+++ WM + ++ AD
Sbjct: 67 PKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQHEESKISDADY 126
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQ-MRDR 181
A R+DLI+KV GI+ A YF + K Y +LL+AYA +K E+AE + ++ +
Sbjct: 127 ASRIDLISKVFGIDAAERYFEGLHIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESD 186
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
L I YN MM +Y G +K+ ++ +++K + D +T+++ LS+CAA + + +
Sbjct: 187 SLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDEL 246
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVI 301
KI+ M D W Y S Y+ + A + L + + YDF++
Sbjct: 247 RKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLM 306
Query: 302 TQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEW-ESRNL 359
+ GNK + ++WK + N + +R YICV+SS L + AE+I +W ES+
Sbjct: 307 ILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTT 366
Query: 360 CHDIRIPNHLIDAYCRRGL 378
D +++A+ GL
Sbjct: 367 EFDASACLRILNAFRDVGL 385
>gi|218188053|gb|EEC70480.1| hypothetical protein OsI_01546 [Oryza sativa Indica Group]
Length = 484
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 207/417 (49%), Gaps = 20/417 (4%)
Query: 53 LYRMLSPMGDP--NDSMVPLLDQWVEEGR--PLDMEQLRIIIKKFRLYKRFSHALQISMW 108
L R L +GD S+ +LD+WV EGR + L + KR +HAL++ W
Sbjct: 46 LGRRLLELGDAAGEGSVSRVLDEWVREGREEAIAAADLAKCARDLHKVKRDAHALELMDW 105
Query: 109 MTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAK 166
M +T A A+ L+L+ V GIE A YF+ +P + + Y ALLN Y AK
Sbjct: 106 MVNTKGMSMTYARYALHLELLYSVYGIEAAEEYFSGIPSFTRDQNHRTYGALLNCYCSAK 165
Query: 167 SAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFS 226
EKA I ++M + G+ T N++M +Y + G + K +L EM+E+ + D+ T
Sbjct: 166 MEEKATNIYRRMDELGIPSSTKLMNNLMGLYLELGQHSKAANLFDEMKERNVQPDELTCC 225
Query: 227 ILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA-LAVLRKSE 285
IL+ + AA + + + + M V W+++ T S Y+ AG+ ++A LA +R E
Sbjct: 226 ILMRSHAAHNKIDTVKETFYNMSL-LDVPKQWSIFRTLGSIYMNAGMVEEAELAFMRAQE 284
Query: 286 VLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR---GYICVISSLLKFD 342
L + Y F++ Q+A+ G+ V RVWK K YNR Y+ ++ L K
Sbjct: 285 FLGFDHGRHPFY-FLMRQFASIGSLRGVNRVWKDIKMTFS-YNRTNFSYLLMLQCLYKLG 342
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
+ ++I++EWE R +D R+ N L A+ R G+ ++AE L K + RG + + T
Sbjct: 343 DTDRMKEIYKEWEYRYENYDPRLTNMLTRAHLRNGMTNEAELLWEKVKERGGDFDFETCE 402
Query: 403 LMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAAC--LGYYKKERDIEGA 457
L YL + ++ +K L + K K+ C L ++++++ +EGA
Sbjct: 403 LFREHYLGKGDTTSALKWAEKMTKLPK-----KQGKQDQETCKFLKWFEEDKVVEGA 454
>gi|357163843|ref|XP_003579864.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Brachypodium distachyon]
Length = 422
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 165/322 (51%), Gaps = 3/322 (0%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S LD+W EGR +LR + + +R+ HAL+++ WM L+ D +R
Sbjct: 83 SATEALDRWAGEGRAAPAPELRRVARDLSRARRYKHALEVAEWMKTHHESDLSENDYGVR 142
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+DLI KV G A +F +P + K Y ALL++YA +K +KAE + ++M+D L
Sbjct: 143 IDLITKVFGANAAEDFFEKLPSEAKSLEAYTALLHSYARSKMTDKAERLFERMKDADLSI 202
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
+ YN MM +Y G K+ ++ E++ + + D +T+++ +SA AA+ D E I+
Sbjct: 203 DVLVYNEMMTLYISVGELDKVPAVAEELKRQNVSPDLFTYNLRISASAASMDLEIFKGIL 262
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
M D WT+Y A+ YV A + L ++E + ++ YDF+I +
Sbjct: 263 DEMSKDPNSNEGWTLYRNLATIYVNASQLVSSGNSLVEAEAKISQREWI-TYDFLILLHT 321
Query: 306 ACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE-SRNLCHDI 363
GN + V +WK + + ++ +R YICV+SS L ++ A++I ++W+ S+ DI
Sbjct: 322 GLGNLERVKDIWKSMQMTSQRMTSRNYICVLSSYLMCGQLKDAKEIVDQWQRSKAPEFDI 381
Query: 364 RIPNHLIDAYCRRGLLHKAETL 385
N L DA G A++
Sbjct: 382 SACNRLFDALLGAGFTDTADSF 403
>gi|296086986|emb|CBI33242.3| unnamed protein product [Vitis vinifera]
Length = 335
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 164/324 (50%), Gaps = 54/324 (16%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LY +SP+GDPN S+VP LD WV+ G + + +L+ II R KRFS AL+IS WM+KK
Sbjct: 41 LYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMSKK 100
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
+P + A++LDLI +V+G A SYFN + K Y ALLN Y + +K+
Sbjct: 101 GICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSL 160
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+Q+M++ G + YN +M +Y G ++K+ ++ EM++ + D +++ I +++
Sbjct: 161 SHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRICINSY 220
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
A SD +G++ ++ ME +++ GL
Sbjct: 221 GAQSDIQGMENVLKEME---------------RQPHIRDGL------------------- 246
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQ--------------NLKVYNRGYICVISSL 338
Y+ +I+ YA+ GNK +VLR+W K N ++Y+ + I +
Sbjct: 247 ---GYNHLISLYASLGNKAEVLRLWSLEKNVEAFVGSLRIVIPMNRRMYHTLIMANIRAG 303
Query: 339 LKFDGMES---AEKIFEEWESRNL 359
+ DG+ + A+KI E+ E++ +
Sbjct: 304 KEVDGLLASMKADKIVEDEETKKI 327
>gi|297806979|ref|XP_002871373.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
gi|297317210|gb|EFH47632.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
Length = 410
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 163/319 (51%), Gaps = 3/319 (0%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S +L++WV EG + + +LR I K+ R +R HAL+++ WM + ++ AD
Sbjct: 68 PKRSATTVLERWVGEGNQITINELREISKELRRTRRHKHALEVTEWMVQHEELKVSDADY 127
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDR- 181
A R+DLI+KV GI+ A YF + K Y +LL+AYA +K E+AE + +++ +
Sbjct: 128 ASRIDLISKVFGIDAAERYFEGLHIDAKTTETYTSLLHAYAGSKQTERAEALFKRIIETD 187
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
L I YN MM +Y G +K+ ++ ++ K + D +T+++ LS+CAA + + +
Sbjct: 188 SLSFGAITYNEMMTLYMSVGQVEKVPEVIQVLKHKKVSPDIFTYNLWLSSCAATFNIDEL 247
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVI 301
+I+ M D W Y S Y+ + A + + + YDF++
Sbjct: 248 RRILEEMRHDASSNEGWVRYINLTSIYINSSRVTNAESTSPVEAEKSISQREWITYDFLM 307
Query: 302 TQYAACGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEW-ESRNL 359
+ GNK + ++WK N K+ +R YICV+SS L + AE+I +W ES+
Sbjct: 308 ILHTGLGNKVMIDQIWKSLGNTNQKLSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTT 367
Query: 360 CHDIRIPNHLIDAYCRRGL 378
D +++A+ GL
Sbjct: 368 EFDASACLRILNAFRDVGL 386
>gi|413950397|gb|AFW83046.1| hypothetical protein ZEAMMB73_939845 [Zea mays]
Length = 453
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 172/369 (46%), Gaps = 38/369 (10%)
Query: 97 KRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI 156
+R+ AL+I WM S+ L+ D A RLDLIAK QA Y+N + +
Sbjct: 122 RRYEQALEIFSWMESCSSLRLSSWDHAARLDLIAKAYSTSQAEEYYNKLQSPATRQAASF 181
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
LL+ Y + EK ++ M+ + + + YN MN
Sbjct: 182 PLLHCYVMERDHEKVLSVIDLMKRNNIHRNVLSYNLWMN--------------------- 220
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
ACA S + + + +M D V + W+ Y T A+ + K GL+ +
Sbjct: 221 --------------ACAEVSGVDSVQSVFQVMLNDETVKVGWSTYCTLANIFRKNGLNTE 266
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVI 335
A A L K+E + Y FV+T YAA + D V+R+W+ K ++ Y+ +
Sbjct: 267 AQACLVKAEAKLSPTG-RLGYSFVMTCYAALNDSDGVMRMWEASKSVPGRILTAYYMAAM 325
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
S +K + AE IF +WE+ HD+R+ N L+ AY R + KAE L +G
Sbjct: 326 SCSIKVGDISQAECIFGKWEAGCRKHDVRVSNVLLGAYVRNRWIEKAERLHLHMLEKGAC 385
Query: 396 PNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIE 455
PN +TW ++ GY+Q+ Q +K V MKK L LL++ W+P E + A +++++ +
Sbjct: 386 PNYKTWEILMEGYVQSRQMDKAVGCMKKGLSLLKS-CHWRPPVELMEAIGKHFEEQGSAD 444
Query: 456 GADYFIKLL 464
A +IK+L
Sbjct: 445 DAYRYIKVL 453
>gi|297800434|ref|XP_002868101.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
gi|297313937|gb|EFH44360.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 164/319 (51%), Gaps = 24/319 (7%)
Query: 61 GDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPA 120
+ N + P+L W ++G + LR IK R +FS AL+ S WM ++ F + P
Sbjct: 45 SNQNAHITPMLASWQKQGHQVKPSDLRGFIKNLRGSNQFSKALEASEWMGEQKVFDIVPE 104
Query: 121 DVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSA-EKAEIIMQQMR 179
D + RL L+ V G+E+A +F +P+ + VY LL++Y +++ +KAE ++MR
Sbjct: 105 DYSARLHLVENVLGLEEAEKFFKSIPKNMTDYFVYATLLSSYTKSENTLDKAEATFEKMR 164
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
+ G + K +NSM+++Y Q ++ L+ EM+E ++CD T + +L A +
Sbjct: 165 ELGFLLKPSPFNSMISLYGQLQKLDMVEKLVREMQETKVECDSPTVNNVLRVYADTCKIK 224
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
++ ++ ++G+ L+ A Y+++G +KA+ M N
Sbjct: 225 AMETFKTWVD-EQGIKLEGGTIVAMAKAYLRSGSIEKAIE--------MYGN-------- 267
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
G++ +V R+W YK+ KV + GY V+SSLLK D ++ AEKI+EEW+
Sbjct: 268 ------VAGSEKEVYRLWDEYKKETKVNDNGYRTVLSSLLKLDNVQGAEKIYEEWKPEGP 321
Query: 360 CHDIRIPNHLIDAYCRRGL 378
D+ IP+ L+ Y G+
Sbjct: 322 KLDMSIPSLLLSRYYAEGM 340
>gi|125548508|gb|EAY94330.1| hypothetical protein OsI_16098 [Oryza sativa Indica Group]
Length = 430
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 161/322 (50%), Gaps = 3/322 (0%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S L++W EGR +LR I + R+ HAL+++ WM L+ D +R
Sbjct: 91 SATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWMKTHHESDLSENDYGMR 150
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+DLI +V G A +F +P ++ Y ALL++YA +K +KAE + ++M+D L
Sbjct: 151 IDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSM 210
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
+ YN MM +Y G K+ + E++ + D +T+++ +SA AA+ D EG I+
Sbjct: 211 NILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGIL 270
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
M D W +Y A YV AG + L ++E + ++ YDF++ +
Sbjct: 271 DEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISQREWI-TYDFLVILHT 329
Query: 306 ACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE-SRNLCHDI 363
GN+D + +WK + ++ +R YICV+SS L ++ A ++ ++W+ S+ DI
Sbjct: 330 GLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDI 389
Query: 364 RIPNHLIDAYCRRGLLHKAETL 385
N L DA+ G A +
Sbjct: 390 SACNRLFDAFLNAGFTDTANSF 411
>gi|21740710|emb|CAD40831.1| OSJNBa0086B14.3 [Oryza sativa Japonica Group]
gi|116310079|emb|CAH67100.1| H0818E04.17 [Oryza sativa Indica Group]
Length = 430
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 160/326 (49%), Gaps = 11/326 (3%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S L++W EGR +LR I + R+ HAL+++ WM L+ D +R
Sbjct: 91 SATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWMKTHHESDLSENDYGMR 150
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+DLI +V G A +F +P ++ Y ALL++YA +K +KAE + ++M+D L
Sbjct: 151 IDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSM 210
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
+ YN MM +Y G K+ + E++ + D +T+++ +SA AA+ D EG I+
Sbjct: 211 NILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGIL 270
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYDFVI 301
M D W +Y A YV AG V + ++ K SR YDF++
Sbjct: 271 DEMSKDPNSNEGWKLYQNLAVIYVDAG-----QLVGSGNSLVEAEAKISRREWITYDFLV 325
Query: 302 TQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE-SRNL 359
+ GN+D + +WK + ++ +R YICV+SS L ++ A ++ ++W+ S+
Sbjct: 326 ILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAP 385
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETL 385
DI N L DA+ G A +
Sbjct: 386 EFDISACNRLFDAFLNAGFTDTANSF 411
>gi|125590560|gb|EAZ30910.1| hypothetical protein OsJ_14991 [Oryza sativa Japonica Group]
Length = 471
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 161/322 (50%), Gaps = 3/322 (0%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S L++W EGR +LR I + R+ HAL+++ WM L+ D +R
Sbjct: 132 SATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWMKTHHESDLSENDYGMR 191
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+DLI +V G A +F +P ++ Y ALL++YA +K +KAE + ++M+D L
Sbjct: 192 IDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSM 251
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
+ YN MM +Y G K+ + E++ + D +T+++ +SA AA+ D EG I+
Sbjct: 252 NILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGIL 311
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
M D W +Y A YV AG + L ++E + ++ YDF++ +
Sbjct: 312 DEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISRREWI-TYDFLVILHT 370
Query: 306 ACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE-SRNLCHDI 363
GN+D + +WK + ++ +R YICV+SS L ++ A ++ ++W+ S+ DI
Sbjct: 371 GLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDI 430
Query: 364 RIPNHLIDAYCRRGLLHKAETL 385
N L DA+ G A +
Sbjct: 431 SACNRLFDAFLNAGFTDTANSF 452
>gi|414586983|tpg|DAA37554.1| TPA: hypothetical protein ZEAMMB73_139718 [Zea mays]
Length = 423
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 181/378 (47%), Gaps = 22/378 (5%)
Query: 20 GNVLDSSSSYSTATGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGR 79
G+ SS + STA G T +++R+ G S L++W EGR
Sbjct: 27 GHGTFSSEAASTAVGDRVVAATGEHDGDDLRSRIFRL----GLAKRSATAALEKWSSEGR 82
Query: 80 PLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAA 139
+LR I + +R+ HAL+++ WM L+ D +R+DLI KV G A
Sbjct: 83 DAPTAELRRIARDLTRVRRYKHALEVADWMKTHHESDLSENDYGMRIDLITKVFGASAAE 142
Query: 140 SYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQ 199
+F +P K Y ALL++Y +K ++AE + ++M+D L + YN MM +Y
Sbjct: 143 DFFEKLPPGAKSLEAYTALLHSYGRSKMTDRAERLFERMKDASLPMDALVYNEMMTLYIS 202
Query: 200 TGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLD-- 257
G K++++ E++ + + D +T+++ SA AA+ D EG ++ M D +
Sbjct: 203 VGELGKVEAVAEELKRQNVSPDLFTYNLRASAAAASMDLEGFRAVLDEMSRDPKSSTEGG 262
Query: 258 WTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYDFVITQYAACGNKDDV 313
W +Y AS YV AG + L + V + S+ YDF++ +A G + +
Sbjct: 263 WALYRDLASVYVDAG---QLLGSVNSPPVEAGEARISQREWITYDFLVILHAGLGRPERI 319
Query: 314 LRVWK--------RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE-SRNLCHDIR 364
+W+ + +Q ++ +R Y+CV+SS L +E A ++ ++W+ S+ D+
Sbjct: 320 RDIWRSMVATSQSQSQQQQRMTSRNYVCVVSSYLACGRLEDAGEVVDQWQRSKAPEFDVS 379
Query: 365 IPNHLIDAYCRRGLLHKA 382
N L+DA R GL A
Sbjct: 380 ACNRLLDALLRAGLADAA 397
>gi|298571988|gb|ADI87991.1| PPR protein [Silene latifolia]
Length = 224
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 131/224 (58%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE +M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D +V +WT ++T
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K+G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
K+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|326504724|dbj|BAK06653.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523789|dbj|BAJ93065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 158/322 (49%), Gaps = 3/322 (0%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S L++W EGR +LR I + +R+ HAL+++ WM L+ D +R
Sbjct: 80 SATEALEKWAGEGRAAPAPELRRIARDLSRARRYKHALEVAEWMKTHHESDLSENDYGVR 139
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+DLI KV G A +F +P K Y ALL++YA +K +KAE + Q+M+D L
Sbjct: 140 IDLITKVFGANAAEDFFEKLPPAAKSLEAYTALLHSYARSKMIDKAERLFQRMKDADLPI 199
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
+ YN MM +Y G K+ L E++ + + D +T+++ +SA A+ D E I+
Sbjct: 200 DVLVYNEMMTLYISVGELDKVPILAEELKRQNVSPDLFTYNLRISASVASMDLEAFKGIL 259
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
M D W +Y AS YV A + L ++E + ++ YD ++ +A
Sbjct: 260 DEMSKDPNSNEGWMLYRNLASIYVDASQLVSSGNSLVEAEAKISQREWI-TYDLLVILHA 318
Query: 306 ACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH-DI 363
GN D V +WK + ++ +R Y+CV+S+ L ++ A ++ ++W+ + D+
Sbjct: 319 GLGNLDRVKDIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKDAAEVVDQWQRSKVPEFDV 378
Query: 364 RIPNHLIDAYCRRGLLHKAETL 385
N L DA G A++
Sbjct: 379 SACNRLFDALLAAGFTDTADSF 400
>gi|326520694|dbj|BAJ92710.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 157/322 (48%), Gaps = 3/322 (0%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S L++W EGR +LR I + +R+ HAL+++ WM L+ D +R
Sbjct: 80 SATEALEKWAGEGRAAPAPELRRIARDLSRARRYKHALEVAEWMKTHHESDLSENDYGVR 139
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+DLI KV G A +F +P K Y ALL++YA +K +KAE + Q+M+D L
Sbjct: 140 IDLITKVFGANAAEDFFEKLPPAAKSLEAYTALLHSYARSKMIDKAERLFQRMKDADLPI 199
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
+ YN MM +Y G K+ L E++ + + D +T+++ +SA A+ D E I+
Sbjct: 200 DVLVYNEMMTLYISVGELDKVPILAEELKRQNVSPDLFTYNLRISASVASMDLEAFKGIL 259
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
M D W +Y AS YV A + L ++E + ++ YD ++ +A
Sbjct: 260 DEMSKDPNSNEGWMLYRNLASIYVDASQLVSSGNSLVEAEAKISQREWI-TYDLLVILHA 318
Query: 306 ACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH-DI 363
GN D V +WK + ++ +R Y+CV+S+ L ++ A + ++W+ + D+
Sbjct: 319 GLGNLDRVKDIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKDAAGVVDQWQRSKVPEFDV 378
Query: 364 RIPNHLIDAYCRRGLLHKAETL 385
N L DA G A++
Sbjct: 379 SACNRLFDALLAAGFTDTADSF 400
>gi|298572066|gb|ADI88030.1| PPR protein [Silene latifolia]
Length = 224
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 129/224 (57%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE +M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D +V +WT ++T
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K G DKA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKLGQLDKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572060|gb|ADI88027.1| PPR protein [Silene latifolia]
Length = 224
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 130/224 (58%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE +M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D +V +WT ++T
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKLGKLEKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
K+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|226528511|ref|NP_001143788.1| uncharacterized protein LOC100276555 [Zea mays]
gi|195627038|gb|ACG35349.1| hypothetical protein [Zea mays]
Length = 422
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 177/373 (47%), Gaps = 22/373 (5%)
Query: 25 SSSSYSTATGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDME 84
SS + STA G T +++R+ G S L++W EGR
Sbjct: 32 SSEAASTAVGDRVVAATGEHDGDDLRSRIFRL----GLAKRSATAALEKWSSEGRDAPAA 87
Query: 85 QLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNC 144
+LR I + +R+ HAL+++ WM L+ D +R+DLI KV G A +F
Sbjct: 88 ELRRIARDLTRVRRYKHALEVADWMKTHHESDLSENDYGMRIDLITKVFGASAAEDFFEK 147
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
+P K Y ALL++Y +K ++AE + ++M+ L + YN MM +Y G
Sbjct: 148 LPAGAKSLEAYTALLHSYGRSKMTDRAERLFERMKGASLPMDALVYNEMMTLYISVGELG 207
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLD--WTVYA 262
K++++ E++ + + D +T+++ SA AA+ D EG ++ M D + W +Y
Sbjct: 208 KVEAVAEELKRQNVSPDLFTYNLRASAAAASMDLEGFRAVLDEMSRDLKSSTEGGWALYR 267
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYDFVITQYAACGNKDDVLRVWK 318
AS YV AG + L + V + S+ YDF++ +A G + + +W+
Sbjct: 268 DLASVYVDAG---QLLGSVNSPPVEAGEARISQREWITYDFLVILHAGLGRPERIRDIWR 324
Query: 319 --------RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE-SRNLCHDIRIPNHL 369
+ + ++ +R Y+CV+SS L +E A ++ ++W+ S+ D+ N L
Sbjct: 325 SMVATSQSQSQSQQRMTSRNYVCVVSSYLACGRLEDAGEVVDQWQRSKAPEFDVSACNRL 384
Query: 370 IDAYCRRGLLHKA 382
+DA R GL A
Sbjct: 385 LDALLRAGLADAA 397
>gi|298572008|gb|ADI88001.1| PPR protein [Silene latifolia]
gi|298572012|gb|ADI88003.1| PPR protein [Silene latifolia]
gi|298572028|gb|ADI88011.1| PPR protein [Silene latifolia]
gi|298572052|gb|ADI88023.1| PPR protein [Silene latifolia]
Length = 224
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 130/224 (58%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE +M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D ++ +WT ++T
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
K+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298571984|gb|ADI87989.1| PPR protein [Silene latifolia]
Length = 224
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 130/224 (58%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE +M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D ++ +WT ++T
Sbjct: 61 KVEDLVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
K+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572016|gb|ADI88005.1| PPR protein [Silene latifolia]
Length = 224
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 130/224 (58%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE +M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYGGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D +V +WT ++T
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K+G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298571976|gb|ADI87985.1| PPR protein [Silene latifolia]
gi|298571992|gb|ADI87993.1| PPR protein [Silene latifolia]
gi|298572000|gb|ADI87997.1| PPR protein [Silene latifolia]
gi|298572064|gb|ADI88029.1| PPR protein [Silene latifolia]
Length = 224
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 130/224 (58%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE +M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D +V +WT ++T
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K+G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572004|gb|ADI87999.1| PPR protein [Silene latifolia]
gi|298572006|gb|ADI88000.1| PPR protein [Silene latifolia]
Length = 224
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 130/224 (58%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE +M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D ++ +WT ++T
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
K+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|356565994|ref|XP_003551220.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Glycine max]
Length = 469
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 187/377 (49%), Gaps = 34/377 (9%)
Query: 90 IKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKL 149
+KK K + AL++S M K+ N + T D AI LDL+AK +GI A +YF +PE
Sbjct: 71 LKKLDDRKLYQLALKLSETMAKR-NMIKTVRDHAIHLDLLAKARGITAAKNYFVNLPESA 129
Query: 150 KLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
K + A+LN Y EKAE M++M++ L ++ YNS++ +Y + G +K+ SL
Sbjct: 130 KNHLCHGAILNCYCKEPMIEKAEGFMEKMKELSLPLSSMPYNSLIMLYTKVGQPEKVSSL 189
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+ EM+ I D YT+++ + A AA +D ++++ M
Sbjct: 190 IQEMKTSNIMLDSYTYNVWMRALAAVNDISSVERVHDEM--------------------- 228
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYN 328
AL L K K AY F+IT Y N +V RVW+ + K N
Sbjct: 229 ------MALTELEKRNAF----KDLTAYQFLITFYGXTSNLYEVFRVWRSLRLAFPKTAN 278
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y+ +I L+K + EK F E E +DIR+ N LI AY + +L KAE L
Sbjct: 279 ISYLNMIRVLVKSKDLLGEEKCFXEXECGCPTYDIRVVNVLIRAYAKLDMLEKAEELKEH 338
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE-AGTRWKPSKECLAACLGY 447
A+ RG +PN +T + YLQ + V+ + +A+ + G +W P + + +
Sbjct: 339 ARRRGAKPNGKTLEIFMDYYLQKGNFKSTVDCLDEAISMGRWNGEKWVPXSKIIDIMMRN 398
Query: 448 YKKERDIEGADYFIKLL 464
+++E+D++GA+ F+++L
Sbjct: 399 FEQEKDVDGAEEFLEIL 415
>gi|298572018|gb|ADI88006.1| PPR protein [Silene latifolia]
Length = 224
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 130/224 (58%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE +M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D +V +WT ++T
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K+G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|449479164|ref|XP_004155523.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 201
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 109/178 (61%), Gaps = 2/178 (1%)
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
+T YAA GNKD+V RVW Y K +N GY+C+ISSL+K D ++ AE+I +EWES +
Sbjct: 1 MTLYAAIGNKDEVYRVWNLYTNLQKRFNSGYLCIISSLMKLDDIDGAERILKEWESGDTS 60
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
D +IPN +I++YC +G + KAE I + G EP W +A+GY N + K E
Sbjct: 61 FDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRAYAWDRLASGYHSNGLTNKAAET 120
Query: 421 MKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRL 478
+KKA+ + + RWKP+ + LAACL Y K ++E A+ I LL ++I ++ RL
Sbjct: 121 LKKAISV--SPPRWKPNYDILAACLEYLKTNGNVELAEEIIGLLCKRDIFPLNICKRL 176
>gi|298572036|gb|ADI88015.1| PPR protein [Silene latifolia]
Length = 224
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 130/224 (58%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE +M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D ++ +WT ++T
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K+G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572014|gb|ADI88004.1| PPR protein [Silene latifolia]
gi|298572038|gb|ADI88016.1| PPR protein [Silene latifolia]
Length = 224
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 130/224 (58%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE++M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D +V +WT ++T
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298571986|gb|ADI87990.1| PPR protein [Silene latifolia]
Length = 224
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 130/224 (58%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE++M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D ++ +WT ++T
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298571978|gb|ADI87986.1| PPR protein [Silene latifolia]
gi|298571980|gb|ADI87987.1| PPR protein [Silene latifolia]
gi|298571982|gb|ADI87988.1| PPR protein [Silene latifolia]
gi|298571990|gb|ADI87992.1| PPR protein [Silene latifolia]
gi|298571994|gb|ADI87994.1| PPR protein [Silene latifolia]
gi|298571996|gb|ADI87995.1| PPR protein [Silene latifolia]
gi|298571998|gb|ADI87996.1| PPR protein [Silene latifolia]
gi|298572002|gb|ADI87998.1| PPR protein [Silene latifolia]
gi|298572020|gb|ADI88007.1| PPR protein [Silene latifolia]
gi|298572022|gb|ADI88008.1| PPR protein [Silene latifolia]
Length = 224
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE +M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D +V +WT ++T
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572040|gb|ADI88017.1| PPR protein [Silene latifolia]
Length = 224
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE +M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D +V +WT ++T
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 TNIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572062|gb|ADI88028.1| PPR protein [Silene latifolia]
Length = 224
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE +M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D +V +WT ++T
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572030|gb|ADI88012.1| PPR protein [Silene latifolia]
Length = 224
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 131/224 (58%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE++M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
+++ L+ EM++K I D Y+++I LSA + E ++++ M+ D ++ +WT ++T
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKLGELEKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
K+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572058|gb|ADI88026.1| PPR protein [Silene latifolia]
Length = 224
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 130/224 (58%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE++M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D ++ +WT ++T
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572042|gb|ADI88018.1| PPR protein [Silene latifolia]
Length = 224
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE +M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D +V +WT ++T
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKLGELEKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 TNIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572024|gb|ADI88009.1| PPR protein [Silene latifolia]
gi|298572032|gb|ADI88013.1| PPR protein [Silene latifolia]
gi|298572044|gb|ADI88019.1| PPR protein [Silene latifolia]
gi|298572056|gb|ADI88025.1| PPR protein [Silene latifolia]
Length = 224
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 129/224 (57%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE +M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D ++ +WT ++T
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572010|gb|ADI88002.1| PPR protein [Silene latifolia]
gi|298572034|gb|ADI88014.1| PPR protein [Silene latifolia]
gi|298572054|gb|ADI88024.1| PPR protein [Silene latifolia]
Length = 224
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 129/224 (57%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE +M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D ++ +WT ++T
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572026|gb|ADI88010.1| PPR protein [Silene latifolia]
gi|298572046|gb|ADI88020.1| PPR protein [Silene latifolia]
Length = 224
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 129/224 (57%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE +M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D ++ +WT ++T
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKLGELEKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572960|gb|ADI88477.1| PPR protein [Silene vulgaris]
Length = 224
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 128/224 (57%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE +M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVAAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
K++ L+ EM++K I D Y+++I LSA + E ++++ M+ D + +WT ++T
Sbjct: 61 KVEELVSEMKQKKIQLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIAPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
A+ Y K G +KA LR E + N+ Y ++I+ Y + GN+ +V RVW YK
Sbjct: 121 AAMYSKLGQLEKAEQCLRNLET-RITNRDRMPYHYLISLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572050|gb|ADI88022.1| PPR protein [Silene latifolia]
Length = 224
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 129/224 (57%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE +M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
+++ L+ EM++K I D Y+++I LSA + E ++++ M+ D ++ +WT ++T
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|9955532|emb|CAC05471.1| putative protein [Arabidopsis thaliana]
Length = 402
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 160/319 (50%), Gaps = 10/319 (3%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S +L++W+ EG + + +LR I K+ R +R+ HAL+ ++ AD
Sbjct: 67 PKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALE-------HEESKISDADY 119
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQ-MRDR 181
A R+DLI+KV GI+ A YF + K Y +LL+AYA +K E+AE + ++ +
Sbjct: 120 ASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESD 179
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
L I YN MM +Y G +K+ ++ +++K + D +T+++ LS+CAA + + +
Sbjct: 180 SLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDEL 239
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVI 301
KI+ M D W Y S Y+ + A + L + + YDF++
Sbjct: 240 RKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLM 299
Query: 302 TQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEW-ESRNL 359
+ GNK + ++WK + N + +R YICV+SS L + AE+I +W ES+
Sbjct: 300 ILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTT 359
Query: 360 CHDIRIPNHLIDAYCRRGL 378
D +++A+ GL
Sbjct: 360 EFDASACLRILNAFRDVGL 378
>gi|449523950|ref|XP_004168986.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 191
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 114/197 (57%), Gaps = 36/197 (18%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LYR +SP+GDPN S+ PLLDQWV E + ++LR IIK+ R+YKRF HAL++
Sbjct: 31 LYRRISPVGDPNISVTPLLDQWVLESGLVQQDELRHIIKELRVYKRFKHALEVE------ 84
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
YFN +P +LK V+IALLN YA K A+KA
Sbjct: 85 ---------------------------DYFNNMPSQLKRCQVHIALLNCYAHEKYADKAN 117
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
++Q++++ G K ++ YN MN+Y+Q G +++LDS ++E +D D++T++ LSA
Sbjct: 118 AVLQKIKEMGFAKTSLPYNITMNLYHQIGEFERLDS---PLKETDVDHDQFTYTTRLSAY 174
Query: 233 AAASDGEGIDKIVAMME 249
A A D GI+KI+ ME
Sbjct: 175 ATAFDFTGIEKIMEQME 191
>gi|298572048|gb|ADI88021.1| PPR protein [Silene latifolia]
Length = 224
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 128/224 (57%), Gaps = 2/224 (0%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ LK +Y ALLNAY AK +KAE +M+QMR++G + YN MM +Y +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
+++ L+ EM++K I D Y+++I LS + E ++++ M+ D ++ +WT ++T
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSTRGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
AS Y K G +KA LR E + N+ Y ++++ Y + GN+ +V RVW YK
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLET-RITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ N GY VISSL++ +E AEK++EEW D +I N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|297729245|ref|NP_001176986.1| Os12g0527850 [Oryza sativa Japonica Group]
gi|255670359|dbj|BAH95714.1| Os12g0527850 [Oryza sativa Japonica Group]
Length = 313
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 137/248 (55%), Gaps = 11/248 (4%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S +L +W EEGR + QL ++++ R Y+RF HAL+I WM + L P D
Sbjct: 40 PKRSAAVVLRRWAEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMRTQPEMRLLPGDH 99
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A+ LDL+AKV+G+ A +F +PE+ K PS ALL+AY +KAE ++++M G
Sbjct: 100 AVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAKAG 159
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ + +N MM++Y +G +K+ ++ E+ I D T++I L+ C+ + + +
Sbjct: 160 YLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTIP-DLVTYNIWLTYCSKKNSVKAAE 218
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYD 298
K+ +M+ +R VV DW ++ S Y+ AGL K + ++ M + SR AY
Sbjct: 219 KVYDLMKDER-VVPDWMTFSLLGSIYINAGLHVKG-----RDALVEMEKRASRKERAAYS 272
Query: 299 FVITQYAA 306
++T YA+
Sbjct: 273 SLLTLYAS 280
>gi|255581580|ref|XP_002531595.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528791|gb|EEF30798.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 176
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 97/137 (70%), Gaps = 2/137 (1%)
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
EKIFEEWESR L +DIRIPN LI Y R+GL+ KAET + +A G +P+ TWY +AT
Sbjct: 19 GEKIFEEWESRKLKYDIRIPNILISTYLRKGLMEKAETFVNRAISEGRKPDAITWYYLAT 78
Query: 407 GYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTG 466
GYLQNNQ+EK VE MKKAL + + K S E LA+CL Y K + D+E A+ IKLL
Sbjct: 79 GYLQNNQTEKAVEMMKKALEVSGSKL--KSSSESLASCLEYLKGKGDLEKAEELIKLLLD 136
Query: 467 KEIISADLQDRLLNNIR 483
+IIS D+Q++LLNNIR
Sbjct: 137 NDIISLDIQEKLLNNIR 153
>gi|15229739|ref|NP_187745.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322901|gb|AAG51439.1|AC008153_12 hypothetical protein; 6614-8314 [Arabidopsis thaliana]
gi|332641514|gb|AEE75035.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 541
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 160/310 (51%), Gaps = 41/310 (13%)
Query: 86 LRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCV 145
LR I++K R R AL++S WM ++ + L P D + R L KV +E+A +F +
Sbjct: 78 LRGIVEKLRSSNRPRQALEVSDWMVEQKMYNL-PEDFSARFHLTEKVLNLEEAEKFFESI 136
Query: 146 PEKLKLPSVYIALLNAYA---CAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
PE ++ S+Y +LL +YA K+ +KAE + ++M+ GL+ + YNSM ++Y GN
Sbjct: 137 PENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGN 196
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVV--LDWTV 260
K+D ++ EM+E ++ D T + L AA SD +DK + ADR + LD
Sbjct: 197 RDKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFL----ADRKEITRLD--- 249
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
GL+ A+A +AY+ +++ Y G +DV RVW +Y
Sbjct: 250 -----------GLTMLAMA---------------KAYE-LMSLYGEAGEIEDVHRVWDKY 282
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKI-FEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
K + N + +I SLLK + AEKI + EWE L D RIP+ L+ Y +G++
Sbjct: 283 KATRQKDNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYREKGMV 342
Query: 380 HKAETLIYKA 389
KA+ L+ K
Sbjct: 343 MKADKLVNKT 352
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
LL++ ++G + LR +IK R + S AL+ S WM +K F L D A RL L
Sbjct: 365 LLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYATRLHLT 424
Query: 130 AKVQGIEQAASYF-NCVPEKLKLPSVYIALLNAYA-CAKSAEKAEIIMQQMRDRGLVKKT 187
KV G+E+A ++F + +PE +K SVY LL+ YA + + KAE + ++MR+ GL K
Sbjct: 425 EKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQSKL 484
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+NS++++Y G ++ L+ +M+ K I+ D T + +L A A
Sbjct: 485 SPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANA 530
>gi|296090465|emb|CBI40661.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 122/212 (57%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S+ +L +W+ EG + + +LR I K+ R +R+ HAL+IS WM F L+ +D
Sbjct: 63 PKRSVTNVLQRWLGEGNQVHISELRNISKELRRAQRYKHALEISEWMVSHDEFELSDSDN 122
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A+R+DL+ +V GI+ A YF +P K Y ALL++YA AK AEKAE + +++++
Sbjct: 123 AVRIDLMTRVFGIDAAERYFEGLPSAAKTSETYTALLHSYAGAKLAEKAEELYERIKESN 182
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ + YN MM +Y G +K+ ++ E++ + + D +T+++ +S+CAA D +G+
Sbjct: 183 VPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYNLWVSSCAATLDIDGVR 242
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+I+ M + W Y A+ Y+ A S
Sbjct: 243 RILKEMSNNSSANDGWVRYRNLANIYIMADYS 274
>gi|125532536|gb|EAY79101.1| hypothetical protein OsI_34208 [Oryza sativa Indica Group]
Length = 369
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 4/233 (1%)
Query: 255 VLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVL 314
++ W YAT +++G+ ++AL ++SE + AY F++T YA G +V
Sbjct: 108 LMTWHSYATIGKVLMQSGMEERALQAFQESEKKIAKKSNRVAYGFLLTMYADLGMNSEVD 167
Query: 315 RVWKRYKQNLKVY--NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
R+W YK + N Y+C IS LLK + + AEK +EEWES+++ HD R+ N L+ A
Sbjct: 168 RIWDVYKSKVPASACNSMYMCRISVLLKMNDIVGAEKAYEEWESKHVYHDSRLINLLLTA 227
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGT 432
YC+ GL+ KAE L+ + +G P TWY +A GY + Q+ K + KKAL A
Sbjct: 228 YCKEGLMEKAEALVDQFVKKGRTPFGNTWYKLAGGYFKVGQASKAADLTKKALA--SASN 285
Query: 433 RWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLLNNIRNG 485
W P + L Y+ +++++E A+ + LL + D+ LL N
Sbjct: 286 EWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTRDIYHGLLKTYVNA 338
>gi|15220095|ref|NP_178143.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42572199|ref|NP_974190.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|145327755|ref|NP_001077853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262222|sp|Q9C977.1|PP135_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80270, mitochondrial; Flags: Precursor
gi|12324975|gb|AAG52431.1|AC018848_2 hypothetical protein; 8785-10851 [Arabidopsis thaliana]
gi|17064898|gb|AAL32603.1| Unknown protein [Arabidopsis thaliana]
gi|20259918|gb|AAM13306.1| unknown protein [Arabidopsis thaliana]
gi|332198258|gb|AEE36379.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198259|gb|AEE36380.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198260|gb|AEE36381.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 176/362 (48%), Gaps = 5/362 (1%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S+ LD+WVEEG + ++ + + R + + ALQ+S W+ +T D
Sbjct: 140 PGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDY 199
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A RLDL K++G+E+ + +P+ K +Y LL A + +K+E++ +M+D G
Sbjct: 200 ASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLG 259
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ M+ + ++ + KK+ ++ ME++ I T+ IL+ A +D G++
Sbjct: 260 FPLSGFTCDQML-LLHKRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGME 318
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
+I+ M+ D GV LD+ A A Y AGL DKA VL++ E + RA+ +++
Sbjct: 319 QILETMK-DEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEAN-RRAFKDLLS 376
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
YA+ G +D+V R+WK + K Y + I + K + ++ AE IFE+ +
Sbjct: 377 IYASLGREDEVKRIWKICES--KPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRAS 434
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ L+ Y +L K + L+ + G TW + Y++ + EK +
Sbjct: 435 SSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLD 494
Query: 423 KA 424
KA
Sbjct: 495 KA 496
>gi|307136025|gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 608
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 178/368 (48%), Gaps = 15/368 (4%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S+ LD+WV EG L + + + R + F ALQ S W+ AD
Sbjct: 152 PALSVTSALDKWVSEGHELSRDDISSTMFGLRKRRMFGKALQFSEWLEASGQLEFNEADY 211
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A LDLIAKVQG+ +A +Y +P + +VY LL Y A +KAE + +M+D
Sbjct: 212 ASHLDLIAKVQGLHKAETYIAKIPNSFRGEAVYRTLLANYVLANDVKKAEEVFNRMKDLE 271
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
T Y+ M+ + Y+ + +++ ++ ME++ + +T+ IL+ A ++D G++
Sbjct: 272 FPMTTFAYDQML-ILYKRIDRRRIADILSLMEKENVKPRPFTYKILIDAKGLSNDISGME 330
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVI 301
++V M+A+ G+ LD A YV GL DKA+ +L+ +E + ++K SR +++
Sbjct: 331 QVVDTMKAE-GIKLDVDTLLLLAKHYVLGGLKDKAMPILKATEEV--NSKGSRWPCRYLL 387
Query: 302 TQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEE----WESR 357
Y +D+V R+W+ + N V + I + K ++ AEKIF+ W+
Sbjct: 388 PLYGELQMEDEVRRLWEICEPNPNV--EECMAAIVAWGKLKNIQEAEKIFDRVVKTWKRL 445
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ H + +I Y +L K + L+ + G + W + Y++ + EK
Sbjct: 446 STKH----YSTMIKVYGDSKMLTKGKELVNQMAKSGCRIDPMIWDAVVKLYVEAGEVEKA 501
Query: 418 VEAMKKAL 425
+ KA+
Sbjct: 502 DSFLFKAV 509
>gi|302798913|ref|XP_002981216.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
gi|300151270|gb|EFJ17917.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
Length = 463
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 186/412 (45%), Gaps = 26/412 (6%)
Query: 62 DPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPAD 121
D ++ +L QW+ EGR E + +K+ + RF A +IS W+ K+ + L
Sbjct: 17 DKGGPVLHILHQWIAEGRESHGEII-AAMKRLKWLGRFKQAYEISDWVIKERSLELQKFH 75
Query: 122 VAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVY-------IALLNAYACAKSAEKAEII 174
LDL +V + A ++ K+P VY I + Y KA ++
Sbjct: 76 FINHLDLTGRVVNMNAAKNFLLT-----KMPRVYAKSEAALITMFENYVIHSLLSKARLV 130
Query: 175 MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAA 234
++ M+++ L+ +N + ++Y + ++ EM + I + T++IL+ A
Sbjct: 131 LKLMKEKNLLTTATAFNKLFHLYANKKKEDGIPVILREMRDMRISPNVETYNILIGIKAK 190
Query: 235 ASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
D EG++++ + M+ D + + T ASGYV AG +KA+A L+++ +
Sbjct: 191 KGDTEGMERLFSKMKCDGDGTPNCEILCTLASGYVNAGDHEKAMAYLKEAVASEEFQESR 250
Query: 295 RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
R +D VI YAA G D + R+W+ ++ V Y+ I++ K ++ AEK+F E
Sbjct: 251 RVHDKVIALYAAMGRADMIDRIWRFTRRFPVVSANSYVATIAAYEKVGRIDRAEKVFAEL 310
Query: 355 -ESRNLCHDIRIPNH---LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
E R L P H L AYC G + KAE L+ + + N +++ + GY++
Sbjct: 311 TEKRTLLR----PAHYVPLFRAYCEGGEMGKAEKLLERIRHGNGHINNLSYHHLVAGYMK 366
Query: 411 NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIK 462
+ + E + + R P + + L + K D+ A+ +
Sbjct: 367 SGNPKMAAETLNRMF-----EERVPPCFDTVMLILKEHAKNADVSSAELLFQ 413
>gi|12321886|gb|AAG50982.1|AC073395_24 hypothetical protein, 3' partial; 101251-102939 [Arabidopsis
thaliana]
Length = 532
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 152/310 (49%), Gaps = 47/310 (15%)
Query: 86 LRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCV 145
LR I++K R R AL++S WM ++ + L P D + R L KV +E+A +F +
Sbjct: 76 LRGIVEKLRSSNRPRQALEVSDWMVEQKMYNL-PEDFSARFHLTEKVLNLEEAEKFFESI 134
Query: 146 PEKLKLPSVYIALLNAYA---CAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
PE ++ S+Y +LL +YA K+ +KAE + ++M+ GL+ + YNSM ++Y GN
Sbjct: 135 PENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGN 194
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVV--LDWTV 260
K+D ++ EM+E ++ D T + L AA SD +DK + ADR + LD
Sbjct: 195 RDKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFL----ADRKEITRLDGLT 250
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
A YV+ G E+ +DV RVW +Y
Sbjct: 251 MLAMAKAYVRDG------------EI------------------------EDVHRVWDKY 274
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKI-FEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
K + N + +I SLLK + AEKI + EWE L D RIP+ L+ Y +G++
Sbjct: 275 KATRQKDNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYREKGMV 334
Query: 380 HKAETLIYKA 389
KA+ L+ K
Sbjct: 335 MKADKLVNKT 344
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
LL++ ++G + LR +IK R + S AL+ S WM +K F L D A RL L
Sbjct: 357 LLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYATRLHLT 416
Query: 130 AKVQGIEQAASYF-NCVPEKLKLPSVYIALLNAYA-CAKSAEKAEIIMQQMRDRGLVKKT 187
KV G+E+A ++F + +PE +K SVY LL+ YA + + KAE + ++MR+ GL K
Sbjct: 417 EKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQSKL 476
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+NS++++Y G ++ L+ +M+ K I+ D T + +L A A
Sbjct: 477 SPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANA 522
>gi|357131430|ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 612
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 189/406 (46%), Gaps = 19/406 (4%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P + + L +WV +G +D + + R + FS ALQ+ W+ + L D
Sbjct: 156 PWNDVSGTLKKWVNDGNTVDRSDVFFAVLNLRRRRFFSKALQLLEWLEESKLIELVERDY 215
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A RLDL+AKV GI +A + + +P L+ VY LL + +KAE + +M+D G
Sbjct: 216 ASRLDLMAKVHGIYKAEKFIDNIPASLRGEIVYRTLLANCVAEVNVKKAEEVFNKMKDLG 275
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
N ++ + Y+ + KK+ ++ ME++ + +T+ +L+ A+ D EG++
Sbjct: 276 FPVTVFAINQLL-LLYKRVDKKKISDVLTMMEKEDVKPSLFTYKLLVDTKGASRDIEGME 334
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
K+V MEA+ G+ D + AT A Y+ G +KA A+L E M N+ A V+
Sbjct: 335 KVVQSMEAE-GITPDLLLQATIAKHYIFGGHREKAEAILESMEGDMKENR--NACKMVMP 391
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKI----FEEWESRN 358
YA G KDDV R+WK + N ++ + I + + +E AE++ F+ W++ +
Sbjct: 392 LYAFLGKKDDVERIWKVCQSNTRLDE--CLSAIEAFGRLGDVEKAEEVFGNMFKTWKTLS 449
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
+ N ++ Y + L+ K + L + + G + T + Y+ + EK
Sbjct: 450 ----SKYYNAMMRVYANQNLMDKGKELAKRMEEDGCRLGISTLDSLVKLYVDAGEVEKAE 505
Query: 419 EAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD-YFIKL 463
+ K L + KP L Y K D+ ++ F KL
Sbjct: 506 SLLHK----LSVKNKMKPQYSSYLMLLDSYSKIGDVHNSEKVFSKL 547
>gi|449506017|ref|XP_004162629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 608
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 186/394 (47%), Gaps = 11/394 (2%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S+ LD+WV EG+ L ++ + + R + F ALQ S W+ D A R
Sbjct: 155 SVPSALDKWVSEGKDLSRAEISLAMLHLRKRRMFGKALQFSEWLEANGQLEFNQRDYASR 214
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
LDLIAKVQG+ +A SY +P+ + ++ LL Y A + +KAE + +M+D
Sbjct: 215 LDLIAKVQGLPKAESYIAKIPQSFQGEVIHRTLLANYVAANNVKKAEEVFNKMKDLEFPM 274
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
++ M+ + Y+ + +KL ++ ME++ + +T+ IL+ A +D G++++V
Sbjct: 275 TPFAHDQML-ILYKRIDKRKLADILSLMEKENVKPSPFTYKILIDAKGLCNDISGMEQVV 333
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVITQY 304
M+A+ G+ D + + A YV GL DKA +L+ E ++K SR ++ Y
Sbjct: 334 DSMKAE-GIKPDVSTLSLLAKHYVSNGLKDKAKVILKDME--ENNSKGSRLPCRILLPLY 390
Query: 305 AACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
A +D+V R+WK + N + + I + K ++ AEKIF+ + R
Sbjct: 391 GALQMEDEVRRLWKICEANPHMEES--MAAIVAWGKLKNVQEAEKIFDRFVKTWKKPSTR 448
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
N +++ Y +L K + L+ + G + TW + Y++ + EK + KA
Sbjct: 449 HYNTMMNVYGGSKMLTKGKELVNQMAESGCRMDELTWDAVVKLYVEAGEVEKADSFLVKA 508
Query: 425 LVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
+ KP + +Y + D+ A+
Sbjct: 509 V----QKYGMKPLFTSYKTLMDHYARRGDVHNAE 538
>gi|224137686|ref|XP_002322619.1| predicted protein [Populus trichocarpa]
gi|222867249|gb|EEF04380.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 191/402 (47%), Gaps = 21/402 (5%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKR--FSHALQISMWMTKKSNFVLTPA 120
P S+ +LD+WV EGR D++QL I F L KR F ALQ+S W+
Sbjct: 16 PGVSVHSVLDKWVAEGR--DLDQLEISNAMFNLRKRRLFGRALQLSEWVEANKRKDFDER 73
Query: 121 DVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRD 180
D A RLDLIAKV+G+++A Y +P+ LK +Y LL A +A+KA + +M+D
Sbjct: 74 DYASRLDLIAKVRGLQKAEVYIEKIPKSLKGEVIYRTLLANCVSANNAKKAVEVFNKMKD 133
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
L YN ++ + Y+ + KK+ ++ ME++ + +T+ +L+ ++D G
Sbjct: 134 LELPITLFSYNQLL-LLYKRHDKKKIADVLLSMEKENVKPSLFTYILLIDTKGQSNDIAG 192
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
+++I M+A+ G+ D A A YV GL +KA VL++ E + + A F+
Sbjct: 193 MEQIAETMKAE-GIEPDIKTQAIMARHYVSGGLKEKAEIVLKEMEGGNLE-EHRWACQFM 250
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE----EWES 356
+ Y G D+V R+WK K++ ++ + I + + + AE +FE W+
Sbjct: 251 LPLYGTLGKADEVSRLWKFCKKSPRLDE--CMAAIEAWGQLKKIPEAEAVFELMSKTWKK 308
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ H + L+ Y +L K + LI + G TW + Y++ + EK
Sbjct: 309 LSSKH----YSALLKVYANNKMLSKGKDLIKQMGDSGCRIGPLTWDALIKLYVEAGEVEK 364
Query: 417 GVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
+ KA+ + KP + Y K+ DI A+
Sbjct: 365 ADSILNKAV----QQNQMKPMFSSYMIIMEKYAKKGDIHNAE 402
>gi|297842839|ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
gi|297335142|gb|EFH65560.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 174/362 (48%), Gaps = 5/362 (1%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S+ LD+WVEEG + ++ + + R + + ALQ+S W+ + D
Sbjct: 141 PGLSIGSALDKWVEEGNEITRVEVAKAMLQLRRRRMYGRALQLSEWLEANKKIEMNERDY 200
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+ RLDL K++G+E +Y +P+ K +Y LL A + +K+E++ +M+D G
Sbjct: 201 SSRLDLTVKIRGLENGEAYMQKIPKSFKGEVIYRTLLANCVAAGNVKKSELVFNRMKDLG 260
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ M+ + Y+ + KK+ ++ ME++ + T+ IL+ A +D G++
Sbjct: 261 FPLSGFTCDQML-LLYKRIDRKKIADVLLLMEKENVKPSLLTYKILIDVKGATNDISGME 319
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
+I+ M+ D GV D+ A A Y AGL +KA VL++ E + RA+ +++
Sbjct: 320 QILETMK-DEGVQPDFQTQALTAKHYSGAGLKEKAEKVLKEMEGESLEAN-RRAFKDLLS 377
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
YA+ G +D+V R+WK + K Y + I + K + ++ AE IFE+ +
Sbjct: 378 IYASLGREDEVTRIWKICES--KPYFDESLAAIHAFGKLNKVQEAEAIFEKIVTMGRRAS 435
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ L+ Y +L K + L+ + G TW + Y++ + EK +
Sbjct: 436 SNTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSMLD 495
Query: 423 KA 424
KA
Sbjct: 496 KA 497
>gi|302801860|ref|XP_002982686.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
gi|300149785|gb|EFJ16439.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
Length = 463
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 186/412 (45%), Gaps = 26/412 (6%)
Query: 62 DPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPAD 121
D ++ +L QW+ EGR E + +K+ + RF A +IS W+ K+ + L
Sbjct: 17 DKGGPVLHILHQWIAEGRESHGEII-AAMKRLKWLGRFKQAYEISDWVIKERSLELQKFH 75
Query: 122 VAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVY-------IALLNAYACAKSAEKAEII 174
L+L +V + A ++ K+P VY I + Y KA ++
Sbjct: 76 FINHLELTGRVVNMNAAKNFLLT-----KMPRVYAKSEAALITMFENYVIHSLLSKARLV 130
Query: 175 MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAA 234
++ M+++ L+ +N + ++Y + ++ EM + I + T++IL+ A
Sbjct: 131 LKLMKEKNLLTTATAFNKLFHLYANKKKEDGIPVILREMRDMRISPNVETYNILIGIKAK 190
Query: 235 ASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
D EG++++ + M+ D + + T ASGYV AG +KA+A L+++ +
Sbjct: 191 KGDTEGMERLFSKMKCDGDGTPNGEILCTLASGYVNAGDHEKAMAYLKEAVASDEFRESR 250
Query: 295 RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
R +D VI YAA G D + R+W+ ++ V Y+ I++ K ++ AEK+F E
Sbjct: 251 RVHDKVIALYAAMGRADMIDRIWRFTRRFPVVSANSYVATIAAYEKVGRIDRAEKVFAEL 310
Query: 355 -ESRNLCHDIRIPNH---LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
E R L P H L AYC G + KAE L+ + + N +++ + GY++
Sbjct: 311 TEKRTLLR----PAHYVPLFRAYCEGGEMGKAEKLLERIRHGNGHINNLSYHHLVAGYMK 366
Query: 411 NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIK 462
+ + E + + R P + + L + K D+ A+ +
Sbjct: 367 SGNPKMAAETLTRMF-----EERVPPCFDTVMLILKEHAKNADVNSAELLFQ 413
>gi|224089975|ref|XP_002308888.1| predicted protein [Populus trichocarpa]
gi|222854864|gb|EEE92411.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 196/432 (45%), Gaps = 23/432 (5%)
Query: 33 TGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKK 92
+ T V SL + +L+ + D S+ +LD+WV EG+ LD ++ +
Sbjct: 71 SDNETDSVVKSLPRKRPTTELFNAIVSASDV--SVQSVLDKWVAEGKDLDRLEISNAMIN 128
Query: 93 FRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLP 152
R + F ALQ+S W D A RLDLIAKV+G+ +A Y + +P+ K
Sbjct: 129 LRKRRMFGRALQLSEWFEANKPQEFVERDYASRLDLIAKVRGLHKAEVYIDKIPKSFKGE 188
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+Y LL + +KAE + +MRD N ++ + Y+ + KK+ ++
Sbjct: 189 VIYRTLLANCVVDHNVKKAEEVFNKMRDLEFPITPFACNQLL-LLYKRLDKKKIADVLLL 247
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
ME++ + +T+ IL+ ++D G+D+IV M+A+ G+ D A A YV G
Sbjct: 248 MEKENVKPSLFTYKILIDTKGQSNDMTGMDQIVETMKAE-GIEPDIRTQAIMARHYVSGG 306
Query: 273 LSDKALAVLRKSE--VLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG 330
L +KA A+L++ E L H R F++ Y A G D+V RVWK +++ ++
Sbjct: 307 LKEKAEAILKEMEGGNLEEHRWACR---FMLPLYGALGKADEVSRVWKFCEKSPRLDE-- 361
Query: 331 YICVISSLLKFDGMESAEKIFE----EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
+ I + + ++ AE +FE W+ + H + L+ Y +L K + LI
Sbjct: 362 CMAAIEAWGRLKKIDEAEAVFELMSKTWKKLSSRH----YSTLLKVYANHKMLSKGKDLI 417
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLG 446
+ G TW + Y++ + EK + KA+ + KP +
Sbjct: 418 KRMGDSGCRIGPLTWDALVKLYVEAGEVEKADSILNKAV----QQNKIKPMYSSFLIIME 473
Query: 447 YYKKERDIEGAD 458
Y + DI A+
Sbjct: 474 RYATKGDIHNAE 485
>gi|449437710|ref|XP_004136634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
gi|449506005|ref|XP_004162626.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 606
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 184/398 (46%), Gaps = 17/398 (4%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S+ LD+WV EG L + + + R + F ALQ S W+ D A R
Sbjct: 151 SVSSALDKWVSEGNELSWDDISSTMMSLRRRRMFGKALQFSEWLEASGQLEFNENDYASR 210
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
LDLIAKVQG+ +A SY +P+ + +Y LL Y A + KAE + +M+D
Sbjct: 211 LDLIAKVQGLHKAESYIAKIPKSFQGEVMYRTLLANYVAANNVNKAEEVFNKMKDLEFPM 270
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
T YN ++ V Y+ + +K+ ++ ME++ + +T+ IL+ A + D G++++V
Sbjct: 271 TTFAYNQVL-VLYKRNDRRKIADVLLLMEKENVKPSPFTYKILIDAKGLSKDISGMEQVV 329
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVITQY 304
M+A+ G+ LD A YV GL DKA A L++ E + ++K SR ++ Y
Sbjct: 330 DTMKAE-GIELDVFALCLLAKHYVSCGLKDKAKATLKEMEEI--NSKGSRWPCRLLLPLY 386
Query: 305 AACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEE----WESRNLC 360
+D+V R+W+ + N + + I + K + AEKIF++ W + +
Sbjct: 387 GELEMEDEVRRLWEICEANPHI--EECMAAIVAWGKLKNIHEAEKIFDKVVKTWPKKKIS 444
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
+ +I Y +L K + L+ + G + W + Y++ + EK
Sbjct: 445 --TKHYCTMIKVYGDCKMLTKGKELVNQMAESGYSIDPLAWDAVVKLYVEAGEVEKADTF 502
Query: 421 MKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
+ KA+ E +P + +Y + D+ A+
Sbjct: 503 LVKAVKKYEM----RPLYCSYRTLMNHYARRGDVHNAE 536
>gi|186478941|ref|NP_174121.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332192779|gb|AEE30900.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 388
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 139/260 (53%), Gaps = 3/260 (1%)
Query: 60 MGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTP 119
+G + P LD+W++ G+ L+ LR +I +RF+HALQ+S W+TK+ F L+
Sbjct: 42 LGREQKKVTPPLDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEWITKRGIFDLST 101
Query: 120 ADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACA-KSAEKAEIIMQQM 178
D A RL L+ G+++A +F +PE ++ SV+ LL+ Y + K+ +AE Q M
Sbjct: 102 EDFASRLCLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAEATYQTM 161
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDK-YTFSILLSACAAASD 237
R + ++ K Y SM+ +Y G +D ++ +M+E G++ DK T + +L A A+ D
Sbjct: 162 RVQNMLLKPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLKAYASLPD 221
Query: 238 GEGIDKIVAMMEADRG-VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA 296
E ++ + +E + L W + A Y+K G S KA+ +LR++E+++ A
Sbjct: 222 VEAMEMFLMGLEVEEPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRRTELVVDTKSKDSA 281
Query: 297 YDFVITQYAACGNKDDVLRV 316
++ Y G K D R+
Sbjct: 282 NKVLMMMYWDAGAKQDASRL 301
>gi|297739953|emb|CBI30135.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 191/400 (47%), Gaps = 11/400 (2%)
Query: 60 MGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTP 119
M + + +L++W +EG+ + ++ + R + F ALQ S WM + +
Sbjct: 165 MAASDQPIHSVLNKWDQEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWMEEHKKLDMVE 224
Query: 120 ADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMR 179
D A R+DLIAKV+G+++A Y +P+ + VY LL +A+KAE + +M+
Sbjct: 225 RDYASRVDLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEVFNKMK 284
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
D G T N ++ + Y+ + KK+ ++ ME++ + +T+ +L+ ++D
Sbjct: 285 DLGFPITTFACNQLL-LLYKRVDKKKIADVLLLMEKEDVKPSLFTYGLLIDTKGQSNDIT 343
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE-VLMMHNKFSRAYD 298
G+++IV M+A+ G+ + V + YV GL +KA A+L++ E + N++
Sbjct: 344 GMEQIVETMKAE-GIEPNLQVQSILVRHYVFGGLKEKAEAILKEMEGGNLKENRW--VCR 400
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
++ YAA G DDV R+WK + N ++ ++ I + K +E AE IF +
Sbjct: 401 VLLPPYAALGKADDVERIWKVCESNPRLPE--FVAAIEAYGKLKKVEEAEAIFNKMSKTF 458
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
+ + L+ Y +L K + L+ + G TW + Y++ + EK
Sbjct: 459 KRLSSKHYSALLKVYADHKMLIKGKDLVKQMSDSGCRIGPLTWDALVKLYVEAGEVEKAD 518
Query: 419 EAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
+ ++KA+ + KP A + Y K DI ++
Sbjct: 519 KILQKAM----QQSPIKPMFSTYMAIMDQYAKRGDIHNSE 554
>gi|225441211|ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Vitis vinifera]
Length = 587
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 191/400 (47%), Gaps = 11/400 (2%)
Query: 60 MGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTP 119
M + + +L++W +EG+ + ++ + R + F ALQ S WM + +
Sbjct: 128 MAASDQPIHSVLNKWDQEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWMEEHKKLDMVE 187
Query: 120 ADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMR 179
D A R+DLIAKV+G+++A Y +P+ + VY LL +A+KAE + +M+
Sbjct: 188 RDYASRVDLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEVFNKMK 247
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
D G T N ++ + Y+ + KK+ ++ ME++ + +T+ +L+ ++D
Sbjct: 248 DLGFPITTFACNQLL-LLYKRVDKKKIADVLLLMEKEDVKPSLFTYGLLIDTKGQSNDIT 306
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE-VLMMHNKFSRAYD 298
G+++IV M+A+ G+ + V + YV GL +KA A+L++ E + N++
Sbjct: 307 GMEQIVETMKAE-GIEPNLQVQSILVRHYVFGGLKEKAEAILKEMEGGNLKENRW--VCR 363
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
++ YAA G DDV R+WK + N ++ ++ I + K +E AE IF +
Sbjct: 364 VLLPPYAALGKADDVERIWKVCESNPRLPE--FVAAIEAYGKLKKVEEAEAIFNKMSKTF 421
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
+ + L+ Y +L K + L+ + G TW + Y++ + EK
Sbjct: 422 KRLSSKHYSALLKVYADHKMLIKGKDLVKQMSDSGCRIGPLTWDALVKLYVEAGEVEKAD 481
Query: 419 EAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
+ ++KA+ + KP A + Y K DI ++
Sbjct: 482 KILQKAM----QQSPIKPMFSTYMAIMDQYAKRGDIHNSE 517
>gi|357509403|ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500005|gb|AES81208.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 176/362 (48%), Gaps = 20/362 (5%)
Query: 71 LDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIA 130
L++WVE+G+ L E++ + + R K + ALQ+S W+ K + D A +LDLIA
Sbjct: 176 LEKWVEDGKELSREEISLTMINLRRRKIYLKALQLSEWLESKKHLEFVERDYASQLDLIA 235
Query: 131 KVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
K+ G+ +A Y +PE + +Y LL + +KAE I +M+D
Sbjct: 236 KLHGLHKAEVYIEKIPESFRGEIIYRTLLANCVTQNNLKKAEEIFNKMKDLEFPLTPFAC 295
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA 250
N ++ +Y +T + KK+ ++ ME++ + TF IL+ ++D +G+D+IV M A
Sbjct: 296 NQLLLLYKRT-DKKKIADVLLLMEQENVKPSPLTFKILIDVKGQSNDIDGMDQIVDQMRA 354
Query: 251 DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL-MMHNKFSRAYDFVITQYAACGN 309
+ G+ D A Y+ G DKA +L++ E + N++ ++ YA G
Sbjct: 355 E-GIEPDNYTKAVLVGHYISGGHDDKAKMLLKEMEGENLKENRW--VCRLLLALYAKLGM 411
Query: 310 KDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE----EWE--SRNLCHDI 363
D+V RVWK + V + + I + K ++ AE +FE +W+ S+N C
Sbjct: 412 ADEVGRVWKVCETRPSVED--CVAAIEAWGKLKKIDEAEAVFEVMARKWKLTSKN-C--- 465
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ L++ Y +L K + LI + +G TW + Y+Q + EK ++K
Sbjct: 466 ---SVLLNVYANNKMLTKGKDLIKRMAHKGCRIGPLTWNALVKLYVQAGEVEKADSVLQK 522
Query: 424 AL 425
A+
Sbjct: 523 AI 524
>gi|12322983|gb|AAG51473.1|AC069471_4 hypothetical protein [Arabidopsis thaliana]
Length = 349
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 139/260 (53%), Gaps = 3/260 (1%)
Query: 60 MGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTP 119
+G + P LD+W++ G+ L+ LR +I +RF+HALQ+S W+TK+ F L+
Sbjct: 3 LGREQKKVTPPLDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEWITKRGIFDLST 62
Query: 120 ADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACA-KSAEKAEIIMQQM 178
D A RL L+ G+++A +F +PE ++ SV+ LL+ Y + K+ +AE Q M
Sbjct: 63 EDFASRLCLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAEATYQTM 122
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDK-YTFSILLSACAAASD 237
R + ++ K Y SM+ +Y G +D ++ +M+E G++ DK T + +L A A+ D
Sbjct: 123 RVQNMLLKPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLKAYASLPD 182
Query: 238 GEGIDKIVAMMEADRG-VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA 296
E ++ + +E + L W + A Y+K G S KA+ +LR++E+++ A
Sbjct: 183 VEAMEMFLMGLEVEEPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRRTELVVDTKSKDSA 242
Query: 297 YDFVITQYAACGNKDDVLRV 316
++ Y G K D R+
Sbjct: 243 NKVLMMMYWDAGAKQDASRL 262
>gi|297844450|ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335948|gb|EFH66365.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 594
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 183/390 (46%), Gaps = 13/390 (3%)
Query: 71 LDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIA 130
LD+WVE+G+ + + + R + + ALQ++ W+ F + D A RLDLI+
Sbjct: 146 LDKWVEQGKDTSRTEFASAMLQLRKRRMYGRALQMTEWLDDNKQFEMKERDYASRLDLIS 205
Query: 131 KVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
KV+G+ + +Y +PE + VY LL+ Y + AE + +M+D G T
Sbjct: 206 KVRGLYKGEAYIETIPESFRGELVYRTLLSNYVATSNVRTAEAVFNKMKDLGFPLSTFTC 265
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA 250
N M+ + Y+ + KK+ ++ ME++ + + T+ IL+ ++D G+++IV M++
Sbjct: 266 NQML-ILYKRVDKKKIADVLLLMEKENLKPNLNTYKILIDTKGLSNDITGMEQIVETMKS 324
Query: 251 DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK 310
+ GV D A A Y AGL +KA VL++ E + Y +++ Y
Sbjct: 325 E-GVEPDLRARALIARNYASAGLKEKAEKVLKEMEGESLEEN-RHVYKDLLSVYGFLQRA 382
Query: 311 DDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI--RIPNH 368
D+V R+WK ++ + YN + I + K D ++ AE +FE+ + H + + +
Sbjct: 383 DEVTRIWKICEEKPR-YNES-LAAILAFGKIDKVKEAEAVFEKM--LKMSHRVSSNVYSV 438
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLL 428
L+ Y ++ + + L+ + G T + YL+ + EK ++ KA+
Sbjct: 439 LLRVYVDHKMVSEGKDLVKQMLDSGCNIGALTLDAVIKLYLEAGEVEKAESSLSKAI--- 495
Query: 429 EAGTRWKPSKECLAACLGYYKKERDIEGAD 458
+ KP +G Y + D+ +
Sbjct: 496 -QSKQIKPLMSSFMYVMGEYVRRGDVHNTE 524
>gi|356503391|ref|XP_003520493.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g80270, mitochondrial-like [Glycine max]
Length = 580
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 192/421 (45%), Gaps = 35/421 (8%)
Query: 45 RKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQ 104
R+G KL+ + M S+ +L++W+EEG L + R K F AL
Sbjct: 118 RRGRVESKLFHEI--MNAQCTSLHLVLEKWLEEGNEL---------TRXRKRKLFGRALL 166
Query: 105 ISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYAC 164
+S W+ K F D A RLDLIAK++G+ +A Y +PE +Y LL
Sbjct: 167 LSEWLESKKEFEFIERDYASRLDLIAKLRGLHKAEVYIETIPESCSREIMYRTLLANCVS 226
Query: 165 AKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYT 224
+ +KAE + +M+D L N ++ Y+ + KK+ L+ ME + I +++
Sbjct: 227 QNNVKKAEEVFSKMKDLDLPITVFTCNELL-FLYKRNDKKKIADLLLLMENEKIKPSRHS 285
Query: 225 FSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK- 283
+SIL+ + D G+D+IV M+A +G+ D A A Y+ AGL DK +L++
Sbjct: 286 YSILIDTKGQSKDIGGMDQIVDRMKA-QGIEPDINTQAVLARHYISAGLQDKVETLLKQM 344
Query: 284 -SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFD 342
E L + R ++ YA G D+V R+WK + N + Y+ + I + K +
Sbjct: 345 EGENLKQNRWLCR---ILLPLYANLGKVDEVGRIWKVCETNPR-YDE-CLGAIEAWGKLN 399
Query: 343 GMESAEKIFE----EWE-SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
++ AEK+FE +W+ S C + L+ Y +L K + L+ + G
Sbjct: 400 KIDEAEKVFEMMVKKWKLSSKTC------SILLKVYANNEMLMKGKDLMKRIGDGGCRIG 453
Query: 398 VRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGA 457
TW + Y+Q + EK ++KA ++ KP L Y K DI +
Sbjct: 454 PLTWDTIVKLYVQTGEVEKADSVLQKAA----QQSQMKPMFSTYLTILEQYAKRGDIHNS 509
Query: 458 D 458
+
Sbjct: 510 E 510
>gi|145335742|ref|NP_173001.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806396|sp|Q9XI21.2|PPR44_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15480, mitochondrial; Flags: Precursor
gi|332191207|gb|AEE29328.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 594
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 190/383 (49%), Gaps = 14/383 (3%)
Query: 45 RKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQ 104
++ S M+K +S + S+ LD+WVE+G+ + ++ + + R + F ALQ
Sbjct: 125 KRPSEMFKAIVSVSGL-----SVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQ 179
Query: 105 ISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYAC 164
++ W+ + F + D A RLDLI+KV+G + +Y +PE + VY LL +
Sbjct: 180 MTEWLDENKQFEMEERDYACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVA 239
Query: 165 AKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYT 224
+ AE + +M+D G T N M+ + Y+ + KK+ ++ +E++ + + T
Sbjct: 240 TSNVRTAEAVFNKMKDLGFPLSTFTCNQML-ILYKRVDKKKIADVLLLLEKENLKPNLNT 298
Query: 225 FSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS 284
+ IL+ +++D G+++IV M+++ GV LD A A Y AGL +KA VL++
Sbjct: 299 YKILIDTKGSSNDITGMEQIVETMKSE-GVELDLRARALIARHYASAGLKEKAEKVLKEM 357
Query: 285 EVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGM 344
E + D +++ Y +D+V RVWK ++N + YN + I + K D +
Sbjct: 358 EGESLEENRHMCKD-LLSVYGYLQREDEVRRVWKICEENPR-YNE-VLAAILAFGKIDKV 414
Query: 345 ESAEKIFEEWESRNLCHDI--RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
+ AE +FE + + H + + + L+ Y ++ + + L+ + G TW
Sbjct: 415 KDAEAVFE--KVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWD 472
Query: 403 LMATGYLQNNQSEKGVEAMKKAL 425
+ Y++ + EK ++ KA+
Sbjct: 473 AVIKLYVEAGEVEKAESSLSKAI 495
>gi|5103846|gb|AAD39676.1|AC007591_41 F9L1.43 [Arabidopsis thaliana]
Length = 623
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 190/383 (49%), Gaps = 14/383 (3%)
Query: 45 RKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQ 104
++ S M+K +S + S+ LD+WVE+G+ + ++ + + R + F ALQ
Sbjct: 154 KRPSEMFKAIVSVSGL-----SVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQ 208
Query: 105 ISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYAC 164
++ W+ + F + D A RLDLI+KV+G + +Y +PE + VY LL +
Sbjct: 209 MTEWLDENKQFEMEERDYACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVA 268
Query: 165 AKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYT 224
+ AE + +M+D G T N M+ + Y+ + KK+ ++ +E++ + + T
Sbjct: 269 TSNVRTAEAVFNKMKDLGFPLSTFTCNQML-ILYKRVDKKKIADVLLLLEKENLKPNLNT 327
Query: 225 FSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS 284
+ IL+ +++D G+++IV M+++ GV LD A A Y AGL +KA VL++
Sbjct: 328 YKILIDTKGSSNDITGMEQIVETMKSE-GVELDLRARALIARHYASAGLKEKAEKVLKEM 386
Query: 285 EVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGM 344
E + D +++ Y +D+V RVWK ++N + YN + I + K D +
Sbjct: 387 EGESLEENRHMCKD-LLSVYGYLQREDEVRRVWKICEENPR-YNE-VLAAILAFGKIDKV 443
Query: 345 ESAEKIFEEWESRNLCHDI--RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
+ AE +FE + + H + + + L+ Y ++ + + L+ + G TW
Sbjct: 444 KDAEAVFE--KVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWD 501
Query: 403 LMATGYLQNNQSEKGVEAMKKAL 425
+ Y++ + EK ++ KA+
Sbjct: 502 AVIKLYVEAGEVEKAESSLSKAI 524
>gi|115458674|ref|NP_001052937.1| Os04g0450200 [Oryza sativa Japonica Group]
gi|113564508|dbj|BAF14851.1| Os04g0450200, partial [Oryza sativa Japonica Group]
Length = 292
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 138/275 (50%), Gaps = 11/275 (4%)
Query: 117 LTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQ 176
L+ D +R+DLI +V G A +F +P ++ Y ALL++YA +K +KAE + +
Sbjct: 4 LSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFK 63
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
+M+D L + YN MM +Y G K+ + E++ + D +T+++ +SA AA+
Sbjct: 64 RMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASM 123
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR- 295
D EG I+ M D W +Y A YV AG + L ++E K SR
Sbjct: 124 DLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEA-----KISRR 178
Query: 296 ---AYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
YDF++ + GN+D + +WK + ++ +R YICV+SS L ++ A ++
Sbjct: 179 EWITYDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVI 238
Query: 352 EEWE-SRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
++W+ S+ DI N L DA+ G A +
Sbjct: 239 DQWQRSKAPEFDISACNRLFDAFLNAGFTDTANSF 273
>gi|449457827|ref|XP_004146649.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 204
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 119/190 (62%), Gaps = 7/190 (3%)
Query: 280 VLRKSEVLMMH-NKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSL 338
+L+KSE L+ + K A++ + YA G KD++ R+W YK+ K++N+G+I +I+SL
Sbjct: 1 MLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKE-KIFNKGFISMITSL 59
Query: 339 LKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
D ++ AE+I++EWE++ L +D+RIPN L+DAYCR GL+ KAE L+ + + + +V
Sbjct: 60 FVLDDIKGAERIYKEWETQKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFSV 119
Query: 399 RTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
+W +A+GYLQ +Q + VE +K A + +R KE LAA L ++D+E +
Sbjct: 120 ESWCYLASGYLQKDQLPQAVETLKLAASV--CPSRLNYVKEILAAFLD---GKQDVEETE 174
Query: 459 YFIKLLTGKE 468
+ LL K+
Sbjct: 175 KVVNLLREKD 184
>gi|357439923|ref|XP_003590239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479287|gb|AES60490.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 181/394 (45%), Gaps = 22/394 (5%)
Query: 71 LDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIA 130
LD+WVE+G+ L +++ + + R K + ALQ W+ T + A +LDLIA
Sbjct: 159 LDKWVEKGKELSRQEIGLALNSLRRRKMYGRALQALDWLESNKKLEFTEKEYASKLDLIA 218
Query: 131 KVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
K++G+ +A Y VP + +Y LL A ++ K E +MR+ G
Sbjct: 219 KLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENLRKTEETFNKMRELGFPVTAFAC 278
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA 250
N ++ +Y + K D L+ ME++ + YT+ IL+ ++D +G+ +IV M+A
Sbjct: 279 NQLLLIYKKIDKKKIADVLLM-MEKENVKPSSYTYKILIDVKGLSNDIDGMSQIVETMKA 337
Query: 251 DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK 310
+ G LD A+ A Y AGL++K A+L++ E + ++ YA G
Sbjct: 338 E-GCELDHLTRASLARHYAAAGLTEKTEAILKEIEGENLKENMW-VCPTLLRLYAILGRA 395
Query: 311 DDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE----EWE--SRNLCHDIR 364
D+V R+WK + +V + + I + + +E AE +FE +W+ +RN
Sbjct: 396 DEVERIWKVCESKPRVED--CLAAIEAWGRLKKIEEAEAVFEMMSNKWKLTARNY----- 448
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
L+ Y R +L+K + LI G TW + + Y+Q + EK ++KA
Sbjct: 449 --ESLLKIYIRHKMLNKGKDLIKTMGDSGCTIGPTTWDALVSLYVQAGEVEKADTVLQKA 506
Query: 425 LVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
L + KP + Y K D+ A+
Sbjct: 507 L----QQNKMKPMFTTFMTIMEQYAKRGDVHNAE 536
>gi|148906608|gb|ABR16456.1| unknown [Picea sitchensis]
Length = 600
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 168/354 (47%), Gaps = 3/354 (0%)
Query: 71 LDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIA 130
L+QW+ +G L ++ I R + F L++S W+ K F T D A RLD+I
Sbjct: 150 LEQWLADGNVLTRREVVITFVHLRNRRMFKRLLKVSDWLEGKKPFKKTERDYASRLDVIT 209
Query: 131 KVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
K+ GI + YF +P ++ Y LL Y+ + EKAE I ++M+ G +Y
Sbjct: 210 KILGIFKGEKYFASIPSDMRGQRAYGTLLANYSSTCNVEKAEEIFKKMKAEGFSLTAFEY 269
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA 250
N ++ + Y+ + KK+ ++ ME++G+ +T+ IL+ D G++++ M++
Sbjct: 270 NQLL-LLYKRLDKKKIQDVLKMMEDEGVKPTIFTYKILIDVKGWMGDIGGMEQVAENMKS 328
Query: 251 DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK 310
+ + +D A Y++AGL++KA VL++ E + + +K SR ++ YA G
Sbjct: 329 E-DIEMDSGTLELLARHYIRAGLAEKAEVVLKELENVSLKDKRSR-LKMLLPLYAELGKP 386
Query: 311 DDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+V R+WK ++ + Y + + K +E AE FE+ + + N L+
Sbjct: 387 TEVERIWKDFEAFPALRLDEYATGVVAWGKLGQIEKAEITFEKLLNSGKKLSAKHYNALL 446
Query: 371 DAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
+ Y LL K + L+ + G W + ++ + EK + KA
Sbjct: 447 NVYADHHLLLKGKELVKRMSDNGCTIEPPIWDALIRLHVNAGELEKADSILFKA 500
>gi|357439973|ref|XP_003590264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479312|gb|AES60515.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 557
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 181/394 (45%), Gaps = 22/394 (5%)
Query: 71 LDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIA 130
LD+WVE+G+ L +++ + + R K + ALQ W+ T + A +LDLIA
Sbjct: 110 LDKWVEKGKELSRQEIGLALNSLRRRKMYGRALQALDWLESNKKLEFTEKEYASKLDLIA 169
Query: 131 KVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
K++G+ +A Y VP + +Y LL A ++ K E +MR+ G
Sbjct: 170 KLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENLRKTEETFNKMRELGFPVTAFAC 229
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA 250
N ++ +Y + K D L+ ME++ + YT+ IL+ ++D +G+ +IV M+A
Sbjct: 230 NQLLLIYKKIDKKKIADVLLM-MEKENVKPSSYTYKILIDVKGLSNDIDGMSQIVETMKA 288
Query: 251 DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK 310
+ G LD A+ A Y AGL++K A+L++ E + ++ YA G
Sbjct: 289 E-GCELDHLTRASLARHYAAAGLTEKTEAILKEIEGENLKENMW-VCPTLLRLYAILGRA 346
Query: 311 DDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE----EWE--SRNLCHDIR 364
D+V R+WK + +V + + I + + +E AE +FE +W+ +RN
Sbjct: 347 DEVERIWKVCESKPRVED--CLAAIEAWGRLKKIEEAEAVFEMMSNKWKLTARNY----- 399
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
L+ Y R +L+K + LI G TW + + Y+Q + EK ++KA
Sbjct: 400 --ESLLKIYIRHKMLNKGKDLIKTMGDSGCTIGPTTWDALVSLYVQAGEVEKADTVLQKA 457
Query: 425 LVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
L + KP + Y K D+ A+
Sbjct: 458 L----QQNKMKPMFTTFMTIMEQYAKRGDVHNAE 487
>gi|414877074|tpg|DAA54205.1| TPA: hypothetical protein ZEAMMB73_351899 [Zea mays]
Length = 613
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 177/400 (44%), Gaps = 17/400 (4%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P + L++W ++G LD +L ++ R K + AL++ ++ L D
Sbjct: 156 PRHQVTSALEKWAKDGNALDRGELYYVLLNLRKRKWYHKALELVEYVQNSQLLELGERDY 215
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A R+DL AKV G+ +A Y +P + VY LL + +K+E + +M+D G
Sbjct: 216 AARVDLTAKVYGLHKAEQYIEKIPASHRSEVVYRTLLANCVAEGNVKKSEQVFNRMKDLG 275
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
T N ++ + Y+ + KK+ ++ ME++ + +T+ +L+ A D E ++
Sbjct: 276 FPVTTFSSNQLL-LLYKRLDKKKIADVLTMMEKEDVKPSIFTYKVLVDAKGMVGDVEAME 334
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
K+V M D G+ D T AT A Y+ G DKA +L E + K A F++
Sbjct: 335 KVVESMVKD-GIEPDLTFNATIARQYIFNGQRDKAETLLESMEGDDIQ-KNRAACKFLLP 392
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEE----WESRN 358
YA GN D V R+WK + N ++ + I + K +E AEK+FE+ W +N
Sbjct: 393 LYAFLGNGDAVERIWKVCEDNTRIDE--CLSAIDAFGKLGNVEKAEKVFEDMFVKW--KN 448
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
L + L+ Y + LL K E L + G + T + Y + EK
Sbjct: 449 LSS--KYYTALLKVYANQNLLDKGEELAKRMDEEGAKFGTPTLNALVKLYADAGEVEKAE 506
Query: 419 EAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
+ K L KPS L Y K+ D+ ++
Sbjct: 507 SLLHK----LSLKNNVKPSYSSYMTLLDSYSKKGDVHNSE 542
>gi|302782563|ref|XP_002973055.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
gi|300159656|gb|EFJ26276.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
Length = 547
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 180/374 (48%), Gaps = 13/374 (3%)
Query: 52 KLYRMLSPMGDPNDSMV-PLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMT 110
+L R +S + D MV P++++W+ EG + L I+ K R KRF HAL+IS W+
Sbjct: 59 ELARRISRLKWCQDHMVVPIVEEWMAEGNEITRYGLIIVRHKLRRRKRFHHALRISDWIA 118
Query: 111 KKSNFVLTPADVAI-RLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAE 169
K + A+ +DL+++V + +A F+ +P K Y LL+ Y A
Sbjct: 119 YKKRVIPYDHKEALNHIDLVSRV-SVTRAREMFDNLPADWKSREAYTVLLSMYVRHSMAA 177
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
AE I ++ GL + N M+ +Y + + K+ L+ + EE G + +F+ILL
Sbjct: 178 DAESIYTTLKRWGL-RSISPINMMLTLYQKHQVFWKVAELIRDAEEAGQSLNMCSFNILL 236
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
A ++ +V MME+ LD Y AS Y +AG+ DKA +L E M
Sbjct: 237 PMTFRAGGVAEMESLVEMMESKN--FLDEHTYCMLASSYGRAGMVDKAKEMLMVVEDGME 294
Query: 290 HNKFS---RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMES 346
KF+ R Y+ +I Y G+ + V R+W + YIC+I S K E
Sbjct: 295 TGKFNRLRRTYNVIIVIYGFIGDVEGVKRIWD-ITSRMDPTAEDYICMIRSSAKVGLFEL 353
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRG-LLHKAETLIYKAQLRGTEPNVRTWYLMA 405
AE F ++ H I + N ++ C+ G + +AE+L+ K G +P+ T++ +
Sbjct: 354 AESGFLALAAQRKMH-ITVCNVMLQV-CQAGNFVLRAESLLRKIHQMGFKPDPATYHHLI 411
Query: 406 TGYLQNNQSEKGVE 419
+L+N+ ++ ++
Sbjct: 412 AIHLKNDNIQRALD 425
>gi|302805546|ref|XP_002984524.1| hypothetical protein SELMODRAFT_423640 [Selaginella moellendorffii]
gi|300147912|gb|EFJ14574.1| hypothetical protein SELMODRAFT_423640 [Selaginella moellendorffii]
Length = 547
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 173/358 (48%), Gaps = 12/358 (3%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI-R 125
+VP++++W+ EG + L I+ K R KRF HAL+IS W+ K + A+
Sbjct: 75 VVPIVEEWMAEGNEITRYGLIIVRHKLRRRKRFHHALRISDWIAYKKRVIPYDHKEALNH 134
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+DL+++V + +A F+ +P K Y LL+ Y A AE I ++ GL +
Sbjct: 135 IDLVSRV-SVTRAREMFDNLPADWKSREGYTVLLSMYVRHSMAADAESIYTTLKRWGL-R 192
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
N M+ +Y + + K+ L+ + EE G + +F+ILL A ++ +V
Sbjct: 193 SISPINMMLTLYQKHQVFWKVAELIRDAEEAGQSLNMCSFNILLPMTFRAGGVAEMESLV 252
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDFVIT 302
MME+ LD Y AS Y +AG+ DKA +L E M KF+ R Y+ +I
Sbjct: 253 EMMESKN--FLDEHTYCMLASSYGRAGMVDKAKEMLMVVEDGMETGKFNRLRRTYNVIIV 310
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
Y G+ + V R+W + YIC+I S K E AE F ++ H
Sbjct: 311 IYGFIGDVEGVKRIWD-ITSRMDPTAEDYICMIRSSAKVGLFEQAESGFLALAAQRKMH- 368
Query: 363 IRIPNHLIDAYCRRG-LLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
I + N ++ C+ G + +AE+L+ K G +P+ T++ + +L+N+ ++ ++
Sbjct: 369 ITVCNVMLQV-CQAGNFVLRAESLLRKIHQMGFKPDPATYHHLIAIHLKNDNIQRALD 425
>gi|6958202|gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]
Length = 612
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 177/396 (44%), Gaps = 9/396 (2%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P + + L +W++ G D + +I R K + ALQ+ W+ L D
Sbjct: 156 PRNGVSGTLKKWLDGGNTFDRSDIFYVIMNLRKRKFYFKALQLLEWLEDSKVIDLGERDY 215
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A RLDL+AKV G+ +A Y + +P + VY LL + +K+E + +M+D G
Sbjct: 216 ASRLDLVAKVHGVYKAEKYIDSIPISHRGEIVYRTLLANCVSEANVKKSEEVFNKMKDLG 275
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
N ++ + Y+ + KK+ ++ +ME++ + +T+ +L+ A D G++
Sbjct: 276 FPVTVFAINQLL-LLYKRVDKKKIADVLAKMEKENVKPSLFTYKLLVDTKGAIRDIAGME 334
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
K+V M+A+ GV D AT A Y+ AG +KA A+L E + A ++
Sbjct: 335 KVVESMQAE-GVEPDLLFQATIAKHYIFAGHREKAEAILESMEGGDIKGN-RNACKILLP 392
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
YA G KDDV R+W+ + N ++ + I S + +E AEK+FE+ +
Sbjct: 393 LYAFLGKKDDVERMWQVCEANPRLDE--CLSAIESFGRLGDVERAEKVFEDMFATWKTLS 450
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ N L+ Y + L K + L + G + T + Y+ + +K +
Sbjct: 451 SKFYNALMKVYADQNLFKKGKELAKRMDEDGCRLGISTIDSLVKLYVGAGEVDKAESILH 510
Query: 423 KALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
K L + KP L Y K+ DI ++
Sbjct: 511 K----LSKSNKMKPQYSSYLMLLDTYSKKGDIHNSE 542
>gi|302788498|ref|XP_002976018.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
gi|300156294|gb|EFJ22923.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
Length = 603
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 166/326 (50%), Gaps = 20/326 (6%)
Query: 64 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA 123
++SM +LD+W EEG+ L + + +I + + R +HAL++ W+ + ++ +
Sbjct: 162 DESMSSVLDKWKEEGKDLTVSMIVTVINRLKNSNRMAHALEMIEWVVDEPDYKDFKLARS 221
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+L++ A+ +GI A F + + K VY ALL Y + +KAE + ++M G
Sbjct: 222 FQLEITARSKGIAAAEKLFEELSAEEKTRPVYNALLTRYVFLHNVKKAEGLFEEMDKAGF 281
Query: 184 VKKT-IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ ++ N MM +Y G+ K ++ + ++ ++ + +T++++L A A D EG++
Sbjct: 282 LSQSPFALNLMMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNVMLDLKAKAGDVEGME 341
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDF 299
KI M+ + D T Y T GY+KAGL+DKA L + EV F R +++
Sbjct: 342 KIFEEMKLNPNAKPDGTSYFTLCKGYLKAGLTDKAEVSLLRMEV----GPFRRTKATFEY 397
Query: 300 VITQYAACGNKDDVLRVWKRYK-------QNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
++ Y G DV R+W++ K + + R + + + + D M K +
Sbjct: 398 MMLAYGQLGLISDVERMWQKCKMVPGDGFNSFLAFQRA-MALAGEVQRVDSM---FKHMD 453
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGL 378
+W+ R+ D++ N+L+ AY ++G+
Sbjct: 454 KWK-RSKTVDLKRHNNLLLAYYKKGM 478
>gi|56783681|dbj|BAD81093.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|56784204|dbj|BAD81589.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|125569936|gb|EAZ11451.1| hypothetical protein OsJ_01319 [Oryza sativa Japonica Group]
Length = 611
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 174/386 (45%), Gaps = 9/386 (2%)
Query: 73 QWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKV 132
+W+ +G L+ +L ++ R K ++ ALQ+ ++ + F L D A R+DL+AKV
Sbjct: 164 KWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLEYVEESKLFDLGERDYASRVDLVAKV 223
Query: 133 QGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
GI +A Y VP + VY LL + +K E + +M+D G N
Sbjct: 224 HGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDLGFPVTVFSCNQ 283
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
++ + Y+ + KKL ++ ME++ + +T+ +L+ AA D E ++K++ M+AD
Sbjct: 284 LL-LLYKRVDKKKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDMEKVIQAMQAD- 341
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD 312
G+ D + AT A Y+ G +KA A+L + E + N+ A FV+ YA G K D
Sbjct: 342 GIEPDLLIQATIARHYIFGGYREKAEAILEQIEGDDI-NENRSACKFVLPLYAFLGKKAD 400
Query: 313 VLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
V R+WK + N ++ + I + K +E AE+IFE N ++
Sbjct: 401 VERIWKVCEVNARLDE--CMSAIEAFGKLGDVEKAEEIFENMFKTWKTLSFEYYNAMLKV 458
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGT 432
Y + L K + L + G T + Y + EK + K L
Sbjct: 459 YANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKLYSDAGEVEKADSILHK----LSYKN 514
Query: 433 RWKPSKECLAACLGYYKKERDIEGAD 458
+ KP L Y K+ D+ A+
Sbjct: 515 KIKPLYTTYLMLLDSYSKKGDVHNAE 540
>gi|11138066|dbj|BAB17739.1| putative DNA-binding protein [Oryza sativa Japonica Group]
Length = 591
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 174/386 (45%), Gaps = 9/386 (2%)
Query: 73 QWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKV 132
+W+ +G L+ +L ++ R K ++ ALQ+ ++ + F L D A R+DL+AKV
Sbjct: 144 KWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLEYVEESKLFDLGERDYASRVDLVAKV 203
Query: 133 QGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
GI +A Y VP + VY LL + +K E + +M+D G N
Sbjct: 204 HGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDLGFPVTVFSCNQ 263
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
++ + Y+ + KKL ++ ME++ + +T+ +L+ AA D E ++K++ M+AD
Sbjct: 264 LL-LLYKRVDKKKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDMEKVIQAMQAD- 321
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD 312
G+ D + AT A Y+ G +KA A+L + E + N+ A FV+ YA G K D
Sbjct: 322 GIEPDLLIQATIARHYIFGGYREKAEAILEQIEGDDI-NENRSACKFVLPLYAFLGKKAD 380
Query: 313 VLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
V R+WK + N ++ + I + K +E AE+IFE N ++
Sbjct: 381 VERIWKVCEVNARLDE--CMSAIEAFGKLGDVEKAEEIFENMFKTWKTLSFEYYNAMLKV 438
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGT 432
Y + L K + L + G T + Y + EK + K L
Sbjct: 439 YANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKLYSDAGEVEKADSILHK----LSYKN 494
Query: 433 RWKPSKECLAACLGYYKKERDIEGAD 458
+ KP L Y K+ D+ A+
Sbjct: 495 KIKPLYTTYLMLLDSYSKKGDVHNAE 520
>gi|226530081|ref|NP_001147602.1| DNA-binding protein [Zea mays]
gi|195612448|gb|ACG28054.1| DNA-binding protein [Zea mays]
Length = 622
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 177/400 (44%), Gaps = 17/400 (4%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P + L++W ++G D +L ++ R +S AL++ W+ K F D
Sbjct: 165 PRHQVTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVEWVQKSQLFEFVERDY 224
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A LDL AKV G+ +A +P + VY LL A + +K+E + +M+D G
Sbjct: 225 AAHLDLTAKVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASNIKKSEQVFNRMKDLG 284
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+N ++ + Y+ + KK+ ++ ME++ + +T+ IL+ A + D E ++
Sbjct: 285 FPVTQFSFNQLL-LLYKRLDRKKIADVLAMMEKEDVKPSLFTYKILVDAKGSVGDIEAME 343
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
K++ ME D + D T AT A Y+ G +KA A+L+ E + K A ++
Sbjct: 344 KVIESMEKD-SIEPDLTFNATIARHYIFYGQREKAEALLKAMEGDDIQ-KNRAACKTLLP 401
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEE----WESRN 358
+A GN D V R+WK + N +V + I + K +E AEK+FE+ W++ +
Sbjct: 402 LHAFLGNSDAVERIWKACEDNTRVAES--VSAIEAFGKLGDVEKAEKVFEDMLVHWKTLS 459
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
+ N L+ Y LL K + L + T + Y++ + EK
Sbjct: 460 ----SKFYNALLKVYADHNLLDKGKELAKRMDENRVRFGAPTLDALVKLYVEAGEVEKAE 515
Query: 419 EAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
+ K L KP L Y K+ D+ ++
Sbjct: 516 SLVHK----LSIQNHIKPIYNTYMTLLDSYSKKGDVRNSE 551
>gi|413946863|gb|AFW79512.1| DNA-binding protein [Zea mays]
Length = 622
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 177/400 (44%), Gaps = 17/400 (4%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P + L++W ++G D +L ++ R +S AL++ W+ K F D
Sbjct: 165 PRHQVTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVEWVQKSQLFEFVERDY 224
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A LDL AKV G+ +A +P + VY LL A + +K+E + +M+D G
Sbjct: 225 AAHLDLTAKVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASNIKKSEQVFNRMKDLG 284
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+N ++ + Y+ + KK+ ++ ME++ + +T+ IL+ A + D E ++
Sbjct: 285 FPVTQFSFNQLL-LLYKRLDRKKIADVLAMMEKEDVKPSLFTYKILVDAKGSVGDIEAME 343
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
K++ ME D + D T AT A Y+ G +KA A+L+ E + K A ++
Sbjct: 344 KVIESMEKD-SIEPDLTFNATIARHYIFYGQREKAEALLKAMEGDDIQ-KNRAACKTLLP 401
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEE----WESRN 358
+A GN D V R+WK + N +V + I + K +E AEK+FE+ W++ +
Sbjct: 402 LHAFLGNSDAVERIWKACEDNTRVAES--VSAIEAFGKLGDVEKAEKVFEDMLVHWKTLS 459
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
+ N L+ Y LL K + L + T + Y++ + EK
Sbjct: 460 ----SKFYNALLKVYADHNLLDKGKELAKRMDENRVRFGAPTLDALVKLYVEAGEVEKAE 515
Query: 419 EAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
+ K L KP L Y K+ D+ ++
Sbjct: 516 SLVHK----LSIQNHIKPIYNTYMTLLDSYSKKGDVRNSE 551
>gi|125525413|gb|EAY73527.1| hypothetical protein OsI_01409 [Oryza sativa Indica Group]
Length = 611
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 173/386 (44%), Gaps = 9/386 (2%)
Query: 73 QWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKV 132
+W+ +G L+ +L ++ R K ++ ALQ+ ++ + F L D A R+DL+AKV
Sbjct: 164 KWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLEYVEESKLFDLGERDYASRVDLVAKV 223
Query: 133 QGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
GI +A Y VP + VY LL + +K E + +M+D G N
Sbjct: 224 HGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDLGFPVTVFSCNQ 283
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
++ + Y+ + KKL ++ ME++ + +T+ +L+ A D E ++K++ M+AD
Sbjct: 284 LL-LLYKRVDKKKLGDVLTMMEKENVKPSLFTYKLLVDTKGATRDIEDMEKVIQAMQAD- 341
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD 312
G+ D + AT A Y+ G +KA A+L + E + N+ A FV+ YA G K D
Sbjct: 342 GIEPDLLIQATIARHYIFGGYREKAEAILEQIEGDDI-NENRSACKFVLPLYAFLGKKAD 400
Query: 313 VLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
V R+WK + N ++ + I + K +E AE+IFE N ++
Sbjct: 401 VERIWKVCEVNARLDE--CMSAIEAFGKLGDVEKAEEIFENMFKTWKTLSFEYYNAMLKV 458
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGT 432
Y + L K + L + G T + Y + EK + K L
Sbjct: 459 YANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKLYSDAGEVEKADSILHK----LSYKN 514
Query: 433 RWKPSKECLAACLGYYKKERDIEGAD 458
+ KP L Y K+ D+ A+
Sbjct: 515 KIKPLYTTYLMLLDSYSKKGDVHNAE 540
>gi|449437992|ref|XP_004136774.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 604
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 174/363 (47%), Gaps = 13/363 (3%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHAL-QISMWMTKKSNFVLTPADVAI 124
S+ LD+WV EG+ L+ I + L S + Q S W+ D A
Sbjct: 155 SVPSALDKWVSEGKDLN-----ICFLFYHLIACISVWVSQFSEWLEANGQLEFNQRDYAS 209
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
RLDLIAKVQG+ +A SY +P+ + ++ LL Y A + +KAE + +M+D
Sbjct: 210 RLDLIAKVQGLPKAESYIAKIPQSFQGEVIHRTLLANYVAANNVKKAEEVFNKMKDLEFP 269
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI 244
++ M+ + Y+ + +KL ++ ME++ + +T+ IL+ A +D G++++
Sbjct: 270 MTPFAHDQML-ILYKRIDKRKLADILSLMEKENVKPSPFTYKILIDAKGLCNDISGMEQV 328
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVITQ 303
V M+A+ G+ D + + A YV GL DKA +L+ E ++K SR ++
Sbjct: 329 VDSMKAE-GIKPDVSTLSLLAKHYVSNGLKDKAKVILKDME--ENNSKGSRLPCRILLPL 385
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
Y A +D+V R+WK + N + + I + K ++ AEKIF+ +
Sbjct: 386 YGALQMEDEVRRLWKICEAN--PHMEESMAAIVAWGKLKNVQEAEKIFDRFVKTWKKPST 443
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
R N +++ Y +L K + L+ + G + TW + Y++ + EK + K
Sbjct: 444 RHYNTMMNVYGGSKMLTKGKELVNQMAESGCRMDELTWDAVVKLYVEAGEVEKADSFLVK 503
Query: 424 ALV 426
A++
Sbjct: 504 AVL 506
>gi|307136024|gb|ADN33878.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 470
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 149/291 (51%), Gaps = 8/291 (2%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S+ LD+WV EG+ L + + + R + F AL+ S W+ V T D
Sbjct: 141 PGLSVPSALDKWVSEGKELSRADISLTMLYLRRRRMFGKALKFSEWLEANGKLV-TDRDY 199
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A +LDLI K++G+ A +Y + +P+ + VY LL + + KAE + +M+D
Sbjct: 200 ASQLDLIGKLRGLRMAENYISKIPKSFQGEVVYRTLLANCVMSTNVRKAEEVFNKMKDLE 259
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
N ++ +Y +T + KK+ ++ ME++ + +T+ IL+ A ++D G++
Sbjct: 260 FPITAFACNQLLLLYKRT-DKKKIADVLLLMEKENVKPSPFTYKILIDAKGLSNDISGME 318
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS-RAYDFVI 301
++V M+A+ G+ L A YV AGL DKA A L+++E + ++K S R F++
Sbjct: 319 QVVDTMKAE-GIKLGVGTLLLLAKHYVSAGLKDKAKATLKETEEI--NSKGSRRPCRFLL 375
Query: 302 TQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
Y +D+V R+W+ + N V + I + K ++ AEKIF+
Sbjct: 376 PLYGELQMEDEVRRLWEICESNPHVEE--CMAAIVAWGKLKNVQEAEKIFD 424
>gi|125535921|gb|EAY82409.1| hypothetical protein OsI_37623 [Oryza sativa Indica Group]
Length = 611
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 185/437 (42%), Gaps = 11/437 (2%)
Query: 24 DSSSSYSTATGTSTREVTISLRKGSSMYKLYRML--SPMGDPNDSMVPLLDQWVEEGRPL 81
D SS T EV + + K L + + P + L +W+ +G L
Sbjct: 113 DESSDEDTIDAIGLSEVEADAKPEEPIKKSQSTLLKALLESPRVDVAGALKKWLNDGNTL 172
Query: 82 DMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASY 141
D +L ++ R K + ALQ+ ++ + L D A R+DL+AK I +A Y
Sbjct: 173 DRSELFYVLLSLRRRKLYIKALQLLEYVEESKLIDLGERDYASRVDLVAKTHSIYKAEKY 232
Query: 142 FNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
VP + VY LL + +KAE + +M+D G N ++ + Y+
Sbjct: 233 IENVPASHRGEIVYRTLLANCVAIANVKKAEQVFNKMKDLGFPVSVFSCNQLL-LLYKRV 291
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVY 261
+ KKL ++ ME++ + +T+ +L+ AA D E ++K++ M+AD G+ D
Sbjct: 292 DKKKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDMEKVIQAMQAD-GIEPDLLFQ 350
Query: 262 ATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK 321
AT A Y+ G +KA A+L + V N+ A FV+ YA G DDV R+WK +
Sbjct: 351 ATIARHYIFGGYREKAEAILEQM-VGDDINENRSACKFVLPLYAFLGKNDDVERIWKVCE 409
Query: 322 QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
N ++ + I + K +E AE+IF+ + N ++ Y + L K
Sbjct: 410 ANARLDE--CMSAIEAFGKLGDVEKAEEIFDNMFKTWKTLSSKYYNAMLKVYANKKLFDK 467
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECL 441
+ L + G T + Y + EK + K L + KP
Sbjct: 468 GKELAKRMGDDGCRLGPYTLDSLVKLYSDAGEVEKADSILHK----LSYKNKIKPMYTTY 523
Query: 442 AACLGYYKKERDIEGAD 458
L Y K+ D+ A+
Sbjct: 524 LMLLDSYSKKGDVHNAE 540
>gi|302801578|ref|XP_002982545.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
gi|300149644|gb|EFJ16298.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
Length = 1138
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 178/372 (47%), Gaps = 16/372 (4%)
Query: 63 PNDS--MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPA 120
P DS +VP+L +W EEG LD E LR I+ K R +KR S AL+++ WM F
Sbjct: 88 PRDSGHVVPMLKEWEEEGNVLDKEMLRAIMLKLRKWKRGSLALEVADWMYYTKQFPQDLD 147
Query: 121 DVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRD 180
DV +R+D+ + + I +A F + K Y + ++ K A+ + ++
Sbjct: 148 DVILRMDMAVRAKKIRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMILHADDFYYKFKE 207
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGI-DCDKYTFSILLSA---CAAAS 236
L I ++ + +Y + G + K+ L ++E G+ C + ++++S +S
Sbjct: 208 AKLKPNDITFSILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNLMVSKYELHGISS 267
Query: 237 DGEGIDKIV-AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS- 294
E +++V A + R + + Y+ A+ Y+ AG+ DKA +L E M F
Sbjct: 268 AEEIFNQLVPAGSDLKRSHL---STYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFPK 324
Query: 295 --RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
R Y +I+ Y+ N+D + RVWK+ ++LK + Y+ +I S + D + SAEK F+
Sbjct: 325 LRRTYHILISMYSTMKNRDGMERVWKKI-EDLKAQD--YVAMIESCGRADEVGSAEKYFK 381
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
E + + L + + L+ Y +G KAE L K + + + ++ + L
Sbjct: 382 EADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKMKEQDVSRDALCYHYIILANLNAK 441
Query: 413 QSEKGVEAMKKA 424
++ VE ++ A
Sbjct: 442 NIDRAVEILELA 453
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 168/366 (45%), Gaps = 10/366 (2%)
Query: 101 HALQISMWM--TKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIAL 158
HAL+I+ WM ++ F LT D R+DL ++ + +A F + + + Y AL
Sbjct: 713 HALEIADWMALSRPRPFTLTTKDNIFRMDLASRCGSVGKAERIFERLAPEHRSEVAYNAL 772
Query: 159 LNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGI 218
L +Y K +AE + ++++ G + N + ++Y Q G ++ L E ++ G+
Sbjct: 773 LLSYTKKKKRGRAERLFKELKATGTISSCYSLNLLASMYRQLGLDAEVLMLAKEAQKLGV 832
Query: 219 DCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKAL 278
+ D +++LL A E ++K+ A + + R +T A A+ YV AG +DK L
Sbjct: 833 ELDMCFYNLLLPAKFRVQGLEEVEKLYATITSPRDRTRFFTCLAM-ANIYVSAGRNDKVL 891
Query: 279 AVLRKSEVLMMHN---KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVI 335
+L + M K R Y+ +I+ YA+ + V R W+R KQ + Y C+I
Sbjct: 892 EMLELIDQGMEAGTIVKQRRRYNVLISMYASLEDGARVERTWERLKQQRQPNTEDYCCII 951
Query: 336 SSLLKFDGMESAEKIFE--EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR- 392
+ K + AE IF+ E ++L + + N ++ Y G+ +AE L+ + +
Sbjct: 952 RAWGKLGHVVRAETIFQVAEANEKSLKYST-VFNAMMFVYSVAGMREEAEGLVQRMEYEL 1010
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKER 452
G + + ++ + Y + K + ++ A + R+ P L A L
Sbjct: 1011 GVKLDPWCYHHLVLLYAKAGDIGKMLSTLRAAQAGGKKERRFTPLAATLWAALNTLADAG 1070
Query: 453 DIEGAD 458
D++ A+
Sbjct: 1071 DVDTAE 1076
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 107/267 (40%), Gaps = 30/267 (11%)
Query: 131 KVQGIEQAASYFN-CVPEKLKLP----SVYIALLNAYACAKSAEKA----EIIMQQMRDR 181
++ GI A FN VP L S Y + +Y A +KA E+I + M
Sbjct: 261 ELHGISSAEEIFNQLVPAGSDLKRSHLSTYSMMAASYLSAGMHDKAQNLLEVIEKAMDQG 320
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
K Y+ ++++Y N ++ + ++E D + ++ +C A +
Sbjct: 321 SFPKLRRTYHILISMYSTMKNRDGMERVWKKIE----DLKAQDYVAMIESCGRADEVGSA 376
Query: 242 DKIVAMMEADR-GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AY 297
+K EADR G++ +++A Y G +DKA + +K M SR Y
Sbjct: 377 EKY--FKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKK----MKEQDVSRDALCY 430
Query: 298 DFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-----GYIC-VISSLLKFDG-MESAEKI 350
++I N D + + + + R G C V+ ++ K G + AE +
Sbjct: 431 HYIILANLNAKNIDRAVEILELAEAAGMRDGRSRPFLGTFCDVLKTIAKETGDVALAETL 490
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRG 377
+W DI + NHL+ Y + G
Sbjct: 491 LADWRKGKYRTDIAVYNHLLRVYLKAG 517
>gi|302798621|ref|XP_002981070.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
gi|300151124|gb|EFJ17771.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
Length = 1138
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 178/372 (47%), Gaps = 16/372 (4%)
Query: 63 PNDS--MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPA 120
P DS +VP+L +W EEG LD E LR I+ K R +KR S AL+++ WM F
Sbjct: 88 PRDSGHVVPMLKEWEEEGNVLDKEMLRAIMLKLRKWKRGSLALEVADWMYYTKQFPQDLD 147
Query: 121 DVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRD 180
DV +R+D+ + + I +A F + K Y + ++ K A+ + ++
Sbjct: 148 DVILRMDMAVRAKKIRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMILHADDFYYKFKE 207
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGI-DCDKYTFSILLSA---CAAAS 236
L I ++ + +Y + G + K+ L ++E G+ C + ++++S +S
Sbjct: 208 AKLKPNDITFSILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNLMVSKYELHGISS 267
Query: 237 DGEGIDKIV-AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS- 294
E +++V A + R + + Y+ A+ Y+ AG+ DKA +L E M F
Sbjct: 268 AEEIFNQLVPAGSDLKRSHL---STYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFPK 324
Query: 295 --RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
R Y +I+ Y+ N+D + RVWK+ ++LK + Y+ +I S + D + SAEK F+
Sbjct: 325 LRRTYHILISMYSTMKNRDGMERVWKKI-EDLKAQD--YVAMIESCGRADEVGSAEKYFK 381
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
E + + L + + L+ Y +G KAE L K + + + ++ + L
Sbjct: 382 EADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKMKEQDVSRDALCYHYIILANLNAR 441
Query: 413 QSEKGVEAMKKA 424
++ VE ++ A
Sbjct: 442 NIDRAVEILELA 453
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 167/366 (45%), Gaps = 10/366 (2%)
Query: 101 HALQISMWM--TKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIAL 158
HAL+I+ WM ++ F LT D R+DL ++ + +A F + + + Y AL
Sbjct: 713 HALEIADWMALSRPRPFTLTTKDNIFRMDLASRCGSVGKAERIFERLAPEHRSEVAYNAL 772
Query: 159 LNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGI 218
L +Y K +AE + ++++ G + N + ++Y Q ++ L E ++ G+
Sbjct: 773 LLSYTKKKKRGRAERLFKELKATGTISSCYSLNLLASMYRQLRLDAEVLMLAKEAQKLGV 832
Query: 219 DCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKAL 278
+ D +++LL A E ++K+ A + + R +T A A+ YV AG +DK L
Sbjct: 833 ELDMCFYNLLLPAKFRVQGLEDVEKLYATITSPRDRTRFFTCLAM-ANIYVSAGRNDKVL 891
Query: 279 AVLRKSEVLMMHN---KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVI 335
+L + M K R Y+ +I+ YA+ + V R W+R KQ + Y C+I
Sbjct: 892 EMLELIDQGMEAGTIVKQRRRYNVLISMYASLEDGARVERTWERLKQQRQPNTEDYCCII 951
Query: 336 SSLLKFDGMESAEKIFE--EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR- 392
+ K + AE IF+ E ++L + + N ++ Y G+ +AE L+ + +
Sbjct: 952 RAWGKLGHVVRAETIFQVAEANEKSLKYST-VFNAMMFVYSVAGMREEAEGLVRRMEYEL 1010
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKER 452
G + + ++ + Y + K + ++ A + R+ P L A L
Sbjct: 1011 GVKLDPWCYHHLVLLYAKAGDIGKMLSTLRAAQACGKKERRFTPLAATLWAALNTLADAG 1070
Query: 453 DIEGAD 458
D++ A+
Sbjct: 1071 DVDTAE 1076
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 106/267 (39%), Gaps = 30/267 (11%)
Query: 131 KVQGIEQAASYFN-CVPEKLKLP----SVYIALLNAYACAKSAEKA----EIIMQQMRDR 181
++ GI A FN VP L S Y + +Y A +KA E+I + M
Sbjct: 261 ELHGISSAEEIFNQLVPAGSDLKRSHLSTYSMMAASYLSAGMHDKAQNLLEVIEKAMDQG 320
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
K Y+ ++++Y N ++ + ++E D + ++ +C A +
Sbjct: 321 SFPKLRRTYHILISMYSTMKNRDGMERVWKKIE----DLKAQDYVAMIESCGRADEVGSA 376
Query: 242 DKIVAMMEADR-GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AY 297
+K EADR G++ +++A Y G +DKA + +K M SR Y
Sbjct: 377 EKY--FKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKK----MKEQDVSRDALCY 430
Query: 298 DFVITQYAACGNKDDVLRVWKRYKQN--LKVYNRGYICVISSLLKFDGMES-----AEKI 350
++I N D + + + + +R ++ +LK E+ AE +
Sbjct: 431 HYIILANLNARNIDRAVEILELAEAAGMRDGRSRPFLGTFCDVLKTIARETGDVALAETL 490
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRG 377
+W DI + NHL+ Y + G
Sbjct: 491 LADWRKGKYRTDIAVYNHLLRVYLKAG 517
>gi|302764000|ref|XP_002965421.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
gi|300166235|gb|EFJ32841.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
Length = 584
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 159/326 (48%), Gaps = 39/326 (11%)
Query: 64 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA 123
++SM +LD+W EEG+ L + + +I + + R +HAL++ W+T
Sbjct: 162 DESMSSVLDKWKEEGKDLTVSMIVTVINRLKNSNRMAHALEMIEWIT------------- 208
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
A+ +GI A F + + K VY ALL Y + +KAE + ++M G
Sbjct: 209 ------ARSKGIAAAEKLFEELSAEEKTRPVYNALLTRYVFLHNVKKAEGLFEEMDKAGF 262
Query: 184 VKKT-IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ ++ N MM +Y G+ K ++ + ++ ++ + +T++++L A A D EG++
Sbjct: 263 LSQSPFALNLMMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNVMLDLKAKAGDVEGME 322
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDF 299
KI M+ + D T Y T GY+KAGL+DKA L + EV F R +++
Sbjct: 323 KIFEEMKLNPNAKPDGTSYFTLCKGYLKAGLTDKAEVSLLRMEV----GPFRRTKATFEY 378
Query: 300 VITQYAACGNKDDVLRVWKRYK-------QNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
++ Y G DV R+W++ K + + R + + + + D M K +
Sbjct: 379 MMLAYGQLGLISDVERMWQKCKMVPGDGFNSFLAFQRA-MALAGEVQRVDSM---FKHMD 434
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGL 378
+W+ R+ D++ N+L+ AY ++G+
Sbjct: 435 KWK-RSKTVDLKRHNNLLLAYYKKGM 459
>gi|449506007|ref|XP_004162627.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 187/404 (46%), Gaps = 25/404 (6%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P+ S+ L +WV +G L + + + R + F ALQ S W+ D
Sbjct: 154 PDFSVASALVKWVSQGNKLSRDDISSTMISLRRRQMFRKALQFSEWLEANGQLEFNERDY 213
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A R+ LIAKVQG+ +A SY +P+ + V+ ALL Y A + EKAE + +++D
Sbjct: 214 ASRVHLIAKVQGLHKAESYIAKIPKSFQGEVVHRALLANYVVANNVEKAEEVFNKIKDLE 273
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
YN M+ V Y+ + +K+ ++ ME++ I +T+ IL+ ++D G++
Sbjct: 274 FPMSIFAYNQML-VLYKKIDRRKIADVLLLMEKENIKPCPFTYKILIDGKGLSNDISGME 332
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
++V M+A+ G+ LD + + A YV GL KA A+L++ E N ++
Sbjct: 333 QVVDSMKAE-GIELDVSTLSLLAKHYVSCGLKVKAKAILKEIEE-TNSNGPQWLCRILLP 390
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEE----WESRN 358
Y +D+V R+W+ + N + + I + + ++ AEKIF+ W+ +
Sbjct: 391 FYGKLQMEDEVRRLWEICEANPHI--EECMAAIVAWGQLKNVQEAEKIFDRVVKTWKKLS 448
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG- 417
H + +++ Y +L K + ++ + G ++ T + Y++ + EK
Sbjct: 449 ARH----YSIMMNVYRDSKMLTKGKEVVNQMAESGCHIDLLTCNAIVKLYVEAGEVEKAD 504
Query: 418 ---VEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
V+A+KK + KP + +Y + D+ A+
Sbjct: 505 SFLVKAVKKYGM--------KPLFTSYKTLMDHYARRGDVHNAE 540
>gi|449506011|ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 613
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 145/291 (49%), Gaps = 7/291 (2%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P ++ LD+WV EG+ L + + + R + + ALQ S W+ D
Sbjct: 156 PGLTVSSALDKWVSEGKELSRDDISSAMLNLRKCRMYGKALQFSEWLEANGKLDFVEKDY 215
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A RLDLI K++G+ A +Y +P+ + VY LL A + +KAE + +M+D
Sbjct: 216 ASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYRTLLANCVIACNVQKAEEVFNKMKDLE 275
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
N ++ +Y +T K D L+ ME++ + ++T+ IL+ ++D G++
Sbjct: 276 FPITAFACNQLLLLYKRTDKRKVADILLL-MEKENVKPSRFTYRILIDTKGLSNDITGME 334
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVI 301
++V M+A+ G+ LD + + A Y+ GL DKA A+L++ E + +++ SR ++
Sbjct: 335 QVVDTMKAE-GIELDVSTLSVLAKHYISGGLKDKAKAILKEMEEI--NSEGSRWPCRILL 391
Query: 302 TQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
Y +D+V R+W+ N + + I + K ++ AEKIF+
Sbjct: 392 PLYGELQMEDEVRRLWEICGSNPHIEE--CMAAIVAWGKLKNIQEAEKIFD 440
>gi|356534606|ref|XP_003535844.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 600
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 195/420 (46%), Gaps = 21/420 (5%)
Query: 49 SMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMW 108
+ KL++++ + P S+ L +W +G+ L +++ + +++ R K + A Q+ W
Sbjct: 133 TQLKLFKVI--LNAPGLSVDSALSKWAGQGKELSRKEIFLAVRELRRRKMYGRAFQLFQW 190
Query: 109 MTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSA 168
+ +D A +LDLIAK++G+ QA Y VPE + +Y LL A +
Sbjct: 191 LESNKKLEFMESDYASQLDLIAKLRGLPQAEKYIESVPESFRGELLYRTLLANCASQNNL 250
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
+E I +M+D L N ++ +Y + K D L+ ME++ + +T+ IL
Sbjct: 251 IASEKIFNKMKDLDLPLTVFACNQLLLLYKKLDKKKIADVLLL-MEKENVKPSLFTYRIL 309
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM 288
+ + ++D G++++ M+ + G D + A A Y AGL +KA A+L++ E
Sbjct: 310 IDSKGHSNDIAGMEQVFETMK-EEGFEPDIQLQALLARHYTSAGLKEKAEAILKEIEGEN 368
Query: 289 MHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAE 348
+ K ++ YA G D+V R+WK + +V + + + + K + +E AE
Sbjct: 369 LEEK-QWVCATLLRLYANLGKADEVERIWKVCESKPRVDD--CLAAVEAWGKLEKIEEAE 425
Query: 349 KIFE----EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
+FE +W+ + + I L+ Y +L K + LI + G TW +
Sbjct: 426 AVFEMASKKWKLNSKNYSI-----LLKIYANNKMLAKGKDLIKRMADSGLRIGPLTWNAL 480
Query: 405 ATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD-YFIKL 463
Y+Q + EK ++KA+ ++ +P L Y K D+ ++ F+K+
Sbjct: 481 VKLYIQAGEVEKADSVLQKAI----QQSQLQPMFTTYLDILEQYAKRGDVHNSEKIFLKM 536
>gi|115487560|ref|NP_001066267.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|77553759|gb|ABA96555.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113648774|dbj|BAF29286.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|125578643|gb|EAZ19789.1| hypothetical protein OsJ_35368 [Oryza sativa Japonica Group]
gi|215767656|dbj|BAG99884.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 611
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 185/437 (42%), Gaps = 11/437 (2%)
Query: 24 DSSSSYSTATGTSTREVTISLRKGSSMYKLYRML--SPMGDPNDSMVPLLDQWVEEGRPL 81
D SS T EV + + K L + + P + L +W+ +G L
Sbjct: 113 DESSDEDTIDAIGLSEVEADAKPEEPIKKSQSTLLKALLESPRVDVAGALKKWLNDGNTL 172
Query: 82 DMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASY 141
D +L ++ R K + ALQ+ ++ + L D A R+DL+AK I +A Y
Sbjct: 173 DRSELFYVLLILRRRKLYIKALQLLEYVEESKLIDLGERDYASRVDLVAKTHSIYKAEKY 232
Query: 142 FNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
VP + VY LL + +KAE + +M+D G N ++ + Y+
Sbjct: 233 IENVPASHRGEIVYRTLLANCVAIANVKKAEQVFNKMKDLGFPVSVFSCNQLL-LLYKRV 291
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVY 261
+ KKL ++ ME++ + +T+ +L+ AA D E ++K++ M+AD G+ D
Sbjct: 292 DKKKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDMEKVIQAMQAD-GIEPDLLFQ 350
Query: 262 ATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK 321
AT A Y+ G +K+ A+L + V N+ A FV+ YA G DDV R+WK +
Sbjct: 351 ATIARHYIFGGYREKSEAILEQM-VGDDINENRSACKFVLPLYAFLGKNDDVERIWKVCE 409
Query: 322 QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
N ++ + I + K +E AE+IF+ + N ++ Y + L K
Sbjct: 410 ANARLDE--CMSAIEAFGKLGDVEKAEEIFDNMFKTWKTLSSKYYNAMLKVYANKKLFDK 467
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECL 441
+ L + G T + Y + EK + K L + KP
Sbjct: 468 GKELAKRMGDDGCRLGPYTLDSLVKLYSDAGEVEKADSILHK----LSYKNKIKPMYTTY 523
Query: 442 AACLGYYKKERDIEGAD 458
L Y K+ D+ A+
Sbjct: 524 LMLLDSYSKKGDVHNAE 540
>gi|357119107|ref|XP_003561287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 576
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 177/393 (45%), Gaps = 9/393 (2%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S+ +LD+W+E+G L+ ++ +++ + + + A Q W+ + D A
Sbjct: 123 SVKSVLDKWIEDGNQLERNEVLLVLFHLKKQRLYWKAFQFMEWIERGHLLNFEERDYACH 182
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
LDLIA+ GIE A Y + VP+ + +Y LL A+ +KAE + +++RD L
Sbjct: 183 LDLIARNTGIEDARKYIDRVPKPFRNEVLYETLLVNCVRARDIQKAEEVFREIRDLSLPL 242
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
N M+ +Y + K D +M ME++ I +T+ +++ ++D G++ +
Sbjct: 243 TVSACNQMILLYKRVARTKVADIIML-MEKENIKPSPFTYKLIIDLKGRSNDISGVEVTL 301
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
M+A GV D+ A Y+ GL +KA AV+ + E+ M +K A ++ YA
Sbjct: 302 NEMKA-AGVEPDFVTQTMVAKFYISGGLIEKAKAVVSEIEMEYMKDK-RHAVRSLLHLYA 359
Query: 306 ACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
A D+V R+WK + K+ + ++ I + K +E AE+ FE +
Sbjct: 360 ALSKPDEVARIWKLCTEP-KLDD--FMAAIEAWGKLGCIEQAEETFEAMLEATQKLSSKY 416
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
N +++ Y L+ K + + + G TW + Y+ + + K ++ A
Sbjct: 417 YNGMLNVYAENKLMDKGKKFVERMSFDGCPNGPLTWDALVKLYVNSGEVAKADSFLQNA- 475
Query: 426 VLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
E +P+ L Y K DI A+
Sbjct: 476 --TEQNPDRRPTYGSYIYLLMAYAKMGDIYNAE 506
>gi|224169626|ref|XP_002339288.1| predicted protein [Populus trichocarpa]
gi|222874812|gb|EEF11943.1| predicted protein [Populus trichocarpa]
Length = 140
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 77/110 (70%), Gaps = 2/110 (1%)
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRW 434
+ GL+ K ETLI +A G +PN +TWY TGYL+N Q+ K +EAMKK +V+ +G RW
Sbjct: 14 QEGLVEKVETLIDRAISIGGDPNAKTWYHFETGYLRNGQTLKAMEAMKKEVVV--SGRRW 71
Query: 435 KPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLLNNIRN 484
KPS E LA CL Y K+E D+E F++LL +IIS D+Q+RLLN+I++
Sbjct: 72 KPSNESLATCLEYLKEEGDLEKVKDFMELLRRNDIISLDIQERLLNHIKD 121
>gi|125557709|gb|EAZ03245.1| hypothetical protein OsI_25393 [Oryza sativa Indica Group]
Length = 610
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 171/368 (46%), Gaps = 6/368 (1%)
Query: 51 YKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMT 110
Y+ Y + P++S+ +LD+W+E+G L+ +++ + + ALQ WM
Sbjct: 144 YRSYLFQIVLDAPSNSLRHVLDKWIEDGNQLERNDAMLVLFHLKKQHMYRKALQFVEWME 203
Query: 111 KKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEK 170
+ D A LDLIA+ GIE A Y VP + +Y L+ A +K
Sbjct: 204 RGKLLNFEKRDYACHLDLIARSHGIETAQKYIKRVPLPFRNEVLYETLIVNCVLAGDIQK 263
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS 230
AE + ++++D L + T+ + M + Y+ K+ S++ ME++ + +T+ +L+
Sbjct: 264 AEEVFKEIKDLCL-RLTVTLCNQMILLYKRIAPGKVASVLMLMEKENVKPSAFTYRLLID 322
Query: 231 ACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH 290
++D GI+ ++ M+A G+ + A Y+ GL++KA AV+++ E + +
Sbjct: 323 LKGRSNDLAGIEVVINEMKA-YGIEPSTSTQTMVARFYIHGGLTEKAEAVVKEMEAQLSN 381
Query: 291 NKFSR-AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEK 349
+K R ++ YAA +DV R+W+ + + ++ I + + +E AE+
Sbjct: 382 SKDGRHVIKSLLHLYAALNKPNDVARIWEMCTEPML---EDFLSAIKAWGELGLIEKAEE 438
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
FE + + N +++ Y + LL K + + + G TW + Y+
Sbjct: 439 TFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCPNGPLTWDALINLYV 498
Query: 410 QNNQSEKG 417
+ + EK
Sbjct: 499 NSGEVEKA 506
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 7/142 (4%)
Query: 135 IEQAASYFNCV---PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYN 191
IE+A F + PEKL Y A+LN YA K K + +++M G + ++
Sbjct: 433 IEKAEETFEAMANAPEKLS-SKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCPNGPLTWD 491
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKY--TFSILLSACAAASDGEGIDKIVAMME 249
+++N+Y +G +K DS + + E+ D ++ L+ A D +KI ++
Sbjct: 492 ALINLYVNSGEVEKADSFLLNVAEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDRLK 551
Query: 250 ADRGVVLDWTVYATAASGYVKA 271
+ G YA YV A
Sbjct: 552 -NVGYAPRPLHYAVLLEAYVNA 572
>gi|356498381|ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 609
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 189/407 (46%), Gaps = 21/407 (5%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P S+ L++WVE G+ L +++ + +++ R K + A Q+ W+ +D
Sbjct: 154 PGLSVDSALNKWVEHGKELSRKEILLAVRELRRRKMYGRAFQLFQWLESNKKLEFMESDY 213
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A +LDLIAK++G+ +A Y VPE + +Y LL A + E I +M+D
Sbjct: 214 ASQLDLIAKLRGLPKAEKYIESVPESFRGELLYRTLLANCASQNNLIATEKIFNKMKDLD 273
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
L N ++ +Y + K D L+ ME++ + +T+ IL+ + ++D G++
Sbjct: 274 LPLTAFACNQLLLLYKKLDKKKIADVLLL-MEKENVKPSLFTYRILIDSKGQSNDIAGME 332
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE-VLMMHNKFSRAYDFVI 301
++ M+ + G D + A A Y +GL +KA A+L++ E + N++ A ++
Sbjct: 333 QVFETMK-EEGFEPDIQIQALLARHYTSSGLKEKAEAMLKEMEGENLKENQWVCAT--LL 389
Query: 302 TQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE----EWESR 357
YA G D+V R+WK + +V + + + + K + +E AE +FE +W+
Sbjct: 390 RLYANLGKADEVERIWKVCESKPRVED--CLAAVEAWGKLNKIEEAEAVFEMVSKKWKLN 447
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ + + L+ Y +L K + L+ G TW + Y+Q + EK
Sbjct: 448 SKNYSV-----LLKIYANNKMLTKGKELVKLMADSGVRIGPLTWDALVKLYIQAGEVEKA 502
Query: 418 VEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD-YFIKL 463
+ KA+ + +P A L Y K D+ ++ F+K+
Sbjct: 503 DSILHKAI----QQNQLQPMFTTYLAILEQYAKRGDVHNSEKIFLKM 545
>gi|297596551|ref|NP_001042753.2| Os01g0280400 [Oryza sativa Japonica Group]
gi|255673117|dbj|BAF04667.2| Os01g0280400, partial [Oryza sativa Japonica Group]
Length = 426
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 159/358 (44%), Gaps = 9/358 (2%)
Query: 101 HALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLN 160
H LQ+ ++ + F L D A R+DL+AKV GI +A Y VP + VY LL
Sbjct: 7 HFLQLLEYVEESKLFDLGERDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLA 66
Query: 161 AYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
+ +K E + +M+D G N ++ + Y+ + KKL ++ ME++ +
Sbjct: 67 NCVAIANVKKTEQVFNKMKDLGFPVTVFSCNQLL-LLYKRVDKKKLGDVLTMMEKENVKP 125
Query: 221 DKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV 280
+T+ +L+ AA D E ++K++ M+AD G+ D + AT A Y+ G +KA A+
Sbjct: 126 SLFTYKLLVDTKGAARDIEDMEKVIQAMQAD-GIEPDLLIQATIARHYIFGGYREKAEAI 184
Query: 281 LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLK 340
L + E + N+ A FV+ YA G K DV R+WK + N ++ + I + K
Sbjct: 185 LEQIEGDDI-NENRSACKFVLPLYAFLGKKADVERIWKVCEVNARL--DECMSAIEAFGK 241
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
+E AE+IFE N ++ Y + L K + L + G T
Sbjct: 242 LGDVEKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPST 301
Query: 401 WYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
+ Y + EK + K L + KP L Y K+ D+ A+
Sbjct: 302 LDSLVKLYSDAGEVEKADSILHK----LSYKNKIKPLYTTYLMLLDSYSKKGDVHNAE 355
>gi|224072985|ref|XP_002303946.1| predicted protein [Populus trichocarpa]
gi|222841378|gb|EEE78925.1| predicted protein [Populus trichocarpa]
Length = 451
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 164/363 (45%), Gaps = 16/363 (4%)
Query: 100 SHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALL 159
S +LQ S W+ + T D A LD IAKV G+ +A + +PE + VY LL
Sbjct: 31 SVSLQFSEWLERSKQTDFTERDYACHLDCIAKVLGLWKAEKFIEKIPESFRGKLVYQTLL 90
Query: 160 NAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGID 219
+ + +KAE + ++MRD GL T++ M + Y+ KK+ +++ M+++ I
Sbjct: 91 ASCVSVLNIKKAESVFRKMRDLGL-PITVEACEQMIIIYKRLEKKKIPNILLMMKDQNIK 149
Query: 220 CDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALA 279
T+ +L+ A +D G++K+V M + G+ LD A A Y+ GL DKA
Sbjct: 150 PSFLTYKLLIDAKCQFNDTTGMEKLVEAMR-NEGMELDVFALAVIARHYISVGLKDKADL 208
Query: 280 VLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLL 339
+L++ E A +++ YA+ GN D+V R+WK K + K I I +
Sbjct: 209 ILKQIEKRKQKGGGLGARRSLLSLYASLGNADEVGRIWKECKADPK--QSECIAAIRAWG 266
Query: 340 KFDGMESAEKIFE----EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
K +E AE + E W++ + L++ Y L K + L+ + G+
Sbjct: 267 KLGKVEEAEAVSEMMLQTWKNPTFGY----YTSLLNVYIDNNLTSKGKDLVEQMGDIGSW 322
Query: 396 PNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIE 455
TW + Y+++ EK + K + R +P A + +Y K DI
Sbjct: 323 AGPLTWDALVRLYIKSGDVEKAHSILLKVARM----KRKRPLYTTCIAVMEHYAKRGDIH 378
Query: 456 GAD 458
+
Sbjct: 379 NTE 381
>gi|125599572|gb|EAZ39148.1| hypothetical protein OsJ_23575 [Oryza sativa Japonica Group]
Length = 610
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 171/368 (46%), Gaps = 6/368 (1%)
Query: 51 YKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMT 110
Y+ Y + P++S+ +LD+W+E+G L+ +++ + + ALQ WM
Sbjct: 144 YRSYLFQIVLDAPSNSLRHVLDKWIEDGNQLERNDAMLVLFHLKKQHMYRKALQFVEWME 203
Query: 111 KKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEK 170
+ D A LDLIA+ GIE A Y VP + +Y L+ A +K
Sbjct: 204 RGKLLNFEKRDYACHLDLIARSHGIETAQKYIKRVPLPFRNEVLYETLIVNCVLAGDIQK 263
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS 230
AE + ++++D L + T+ + M + Y+ K+ S++ ME++ + +T+ +L+
Sbjct: 264 AEEVFKEIKDLCL-RLTVTLCNQMILLYKRIAPGKVASVLMLMEKENVKPSAFTYRLLID 322
Query: 231 ACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH 290
++D GI+ ++ M+A G+ + A Y+ GL++KA AV+++ E + +
Sbjct: 323 LKGRSNDLAGIEVVLNEMKA-YGIEPSTSTQTMVARFYIHGGLTEKAEAVVKEMEAQLSN 381
Query: 291 NKFSR-AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEK 349
+K R ++ YAA +DV R+W+ + + ++ I + + +E AE+
Sbjct: 382 SKDGRHVIKSLLHLYAALNKPNDVARIWEMCTEPML---EDFLSAIKAWGELGLIEKAEE 438
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
FE + + N +++ Y + LL K + + + G TW + Y+
Sbjct: 439 TFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCPNGPLTWDALINLYV 498
Query: 410 QNNQSEKG 417
+ + EK
Sbjct: 499 NSGEVEKA 506
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 7/142 (4%)
Query: 135 IEQAASYFNCV---PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYN 191
IE+A F + PEKL Y A+LN YA K K + +++M G + ++
Sbjct: 433 IEKAEETFEAMANAPEKLS-SKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCPNGPLTWD 491
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKY--TFSILLSACAAASDGEGIDKIVAMME 249
+++N+Y +G +K DS + + E+ D ++ L+ A D +KI ++
Sbjct: 492 ALINLYVNSGEVEKADSFLLNVAEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDRLK 551
Query: 250 ADRGVVLDWTVYATAASGYVKA 271
+ G YA YV A
Sbjct: 552 -NVGYAPRPLHYAVLLEAYVNA 572
>gi|414884017|tpg|DAA60031.1| TPA: hypothetical protein ZEAMMB73_016344 [Zea mays]
Length = 703
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 161/338 (47%), Gaps = 11/338 (3%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S++P+LD WV+ G L+ +++ +++ R + ++ AL+ W+ ++ D A
Sbjct: 261 SLMPVLDGWVKIGNRLERDKVNMVLFHLRKQRMYNKALKFVEWIERRKLLNFEERDYASH 320
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
LDLIA+ G+E A Y VPE + +Y LL C A+KAE + ++R+ L
Sbjct: 321 LDLIARNYGVEAAQKYIERVPEAFRSEVLYETLLVNCVCRDDAQKAEQVFNEIRELSLPL 380
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
N M+ +Y + K +D ++ ME++ I +T+ +++ ++D G+++++
Sbjct: 381 TISACNQMLLLYKRVSRNKVVD-ILTLMEKENIKYSIFTYKLMIDLKVRSNDILGMEQVL 439
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
M+ + G+ ++T+ A Y+ ++KA V+ EV + N+ A ++ YA
Sbjct: 440 NSMK-ENGLEPNFTIQTMVAKFYISGCFTEKAEEVINAMEVHVKANR--HAVRSLLDLYA 496
Query: 306 ACGNKDDVLRVWKRYKQNLKVYNR--GYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
G DV RVW NL + ++ I + K +E AE+IF+
Sbjct: 497 ILGRPVDVERVW-----NLCAEPKLEDFLAAIKAWSKLGHIERAEEIFDVLVKTFPKLTS 551
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+ N +++ Y LL K++ I + L G TW
Sbjct: 552 KYFNAMLEVYAENKLLDKSKKFIERMCLDGCTIGPLTW 589
>gi|302789381|ref|XP_002976459.1| hypothetical protein SELMODRAFT_416459 [Selaginella moellendorffii]
gi|300156089|gb|EFJ22719.1| hypothetical protein SELMODRAFT_416459 [Selaginella moellendorffii]
Length = 509
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 187/406 (46%), Gaps = 16/406 (3%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
+ +VP + QW+ EG + L ++++ R KR+ AL W+ + +
Sbjct: 46 NRVVPAIKQWIREGNSVTSCGLDRVVRRLRSRKRYLQALMAVDWVANEKVIPFGYHETLQ 105
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
RLDL ++ + + F +P++ + Y LL Y E AE MQ++R G +
Sbjct: 106 RLDLCSRCHHVTRTLLLFRRLPKQWRGEDAYCILLEMYYKRDMLEDAEKTMQELRGIG-I 164
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC-AAASDGEGIDK 243
K Y+ M++ Y G + + ++ E++ G+ D+ ++ILL+A + D ++
Sbjct: 165 KSLQPYHLMLSFYKLRGMEMRFERMVTEIKGSGLALDRSFYTILLAARDSFGGDMVAVED 224
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF---V 300
++A ME RG+ LD A Y+++GL K+ VL++ E + +F + +
Sbjct: 225 VLAEMEG-RGLKLDAVGCLAVAGIYLRSGLRHKSERVLQRLEKSLKSGEFKYSNSIRRRM 283
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
+ + G++D V R+W +++ +I I + + M+ AE ++ N C
Sbjct: 284 LAMFGKLGDRDAVDRIWHSIERSASTTVEDFIFGIEAFGRVGKMDEAEDMYMRVGC-NSC 342
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV-- 418
+ R+ N + +G + +A L+ + + + T++L+ YL+ +
Sbjct: 343 NP-RLHNAFLAVLVEQGDVIRAVALVERMKGVRCLLSTVTYHLLIKVYLKAGDVSRATLA 401
Query: 419 -EAMKKALVLLEAGTRW-KPSKECLAACLGYYKKERDIEGADYFIK 462
E+++ A LE W +PS E LA L ++ D++ ++ +K
Sbjct: 402 FESLRSAFGKLE----WPRPSSETLAVMLEFFVGTGDVQASERLVK 443
>gi|4454476|gb|AAD20923.1| hypothetical protein [Arabidopsis thaliana]
Length = 424
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 179/430 (41%), Gaps = 81/430 (18%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
L R + + D + S+ PLL +W + G + +LR II RFSHALQ+S WM ++
Sbjct: 39 LKRRIQRVQDSSVSITPLLREWCQRGNQTGLSKLRSIITSLHRSNRFSHALQVSDWMIEQ 98
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
+ L+ D RL L AKV G+E+AA +F VP AE +
Sbjct: 99 KAYKLSSMDFERRLFLAAKVGGVEEAAKFFETVP---------------------AEDHD 137
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
++++ L+ EM+EK + F LL++
Sbjct: 138 MVVK--------------------------------LLGEMDEKKMQPQGLCFVKLLTSY 165
Query: 233 AAAS--DGEGIDKIVAMMEADRGVVLD-WTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
+ AS D +G++K ++ E ++ D WT + Y++AG +K LA+LR+SE +
Sbjct: 166 SMASVVDVQGVEKFLSKWEV---MIQDKWTTFYFPGLVYIRAGFMEKGLALLRRSETFVD 222
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEK 349
Y ++T Y +DV R+W K ++ I G +
Sbjct: 223 DGCREIIYGCLMTVYCNENLTEDVYRLWNLAKDYGISFDSSRCSDIVKAFTKKG--DLDG 280
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA--TG 407
+ EEW N C ++ + + + C + K ++ K + + W +A
Sbjct: 281 VMEEW---NECPNLDLMDFGLQHRCVKEEAEKVVDMLGKKESK--------WESLAHKVN 329
Query: 408 YLQNNQSEKGVEAMKKALVLLEA--GTRWKPSKECLA----ACLGYYKKERDIEGADYFI 461
L ++ K E K+ +E RW P K +A AC+ Y + RD+E +
Sbjct: 330 TLVEDEDAKEEERRKRVAEAMEGRLHDRWNP-KNSMALSAFACVQYVEGRRDMESTADIL 388
Query: 462 KLLTGKEIIS 471
+LL +E +S
Sbjct: 389 RLLNKREQVS 398
>gi|388512893|gb|AFK44508.1| unknown [Medicago truncatula]
Length = 244
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 104/193 (53%), Gaps = 3/193 (1%)
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK-VYNRGY 331
L +KA L+K+E ++ + + ++++ Y + GNKD+V RVW YK + N GY
Sbjct: 3 LFEKAQECLKKAEGRIL-GRDKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLGY 61
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+ISSL++ D +E AEK++EEW S D RI N LI Y ++G K +
Sbjct: 62 HAIISSLVRMDDIEGAEKLYEEWVSVRPSDDSRIGNLLISWYLKKGKSDKVFSFFKHMSE 121
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKE 451
G PN TW L++ G++ + + + ++KA + ++ + WKP LAA L + E
Sbjct: 122 GGGCPNSTTWELLSEGHIAEKRVSEALSCLEKAFMTSDSKS-WKPKPIKLAAFLKLCQDE 180
Query: 452 RDIEGADYFIKLL 464
D+E A I+LL
Sbjct: 181 DDMESAKVLIELL 193
>gi|297834428|ref|XP_002885096.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
gi|297330936|gb|EFH61355.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
Length = 605
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 188/403 (46%), Gaps = 18/403 (4%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S+ +L++WV+EG+ L ++ + I R K ++ LQ+ W+ + F T A+ A +
Sbjct: 151 SVKHVLEKWVKEGKDLSQAEVSLAIFHLRKRKYYAMCLQLWEWLGANTQFEFTEANYASQ 210
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
LDL+AKV +++A ++ +PE + VY LL KAE + +M++
Sbjct: 211 LDLVAKVHSLQKAENFLKDIPESFRGEVVYRTLLANCVLKHHVNKAEDLFNKMKELKFPT 270
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
N ++ + Y + KK+ ++ ME + I + T+ L+++ A D G++KIV
Sbjct: 271 SVFACNQLL-LLYSMHDRKKISDVLLLMERENIKPSRGTYQFLINSKGLAGDITGMEKIV 329
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK--FSRAYDFVITQ 303
M+ + G+ +D + AT A Y++AGL ++A ++++ E + R+ ++
Sbjct: 330 ETMK-EEGIEVDPELQATLAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRS---LLPL 385
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
YA G+ D+V R+ QNL+ N I I + K +E AE +FE + +
Sbjct: 386 YADIGDSDNVRRLSTFVDQNLRYDN--CISAIRAWGKLKEVEEAEAVFERLVEKYKIFPM 443
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
L++ Y +L K + L+ + G TW+ + Y+ K E K
Sbjct: 444 LPYFALMEIYTENKMLAKGKDLVKRMGNAGVTIGPSTWHALVKLYI------KAGEVGKA 497
Query: 424 ALVLLEA--GTRWKPSKECLAACLGYYKKERDIEGAD-YFIKL 463
L+L A + +P A L Y K D+ + F+K+
Sbjct: 498 ELILNRATKDNKMRPMFISYMAILEEYAKRGDVHNTEKVFMKM 540
>gi|449437712|ref|XP_004136635.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 140/291 (48%), Gaps = 7/291 (2%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P ++ LD+WV EG+ L + + + R + + ALQ S W+ D
Sbjct: 148 PGLTVSSALDKWVSEGKELSRDDISSAMLNLRKCRMYGKALQFSEWLEANGKLDFVEKDY 207
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
A RLDLI K++G+ A +Y +P+ + VY LL A + KAE + +M++
Sbjct: 208 ASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYQTLLVNCVIASNVHKAEKVFNKMKNLE 267
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
N ++ +Y +T K D L+ M+++ + T+ IL+ ++D G++
Sbjct: 268 FPITAFACNQLLLLYKRTDKRKIADVLLL-MKKENVKYSTSTYRILIDVNGLSNDITGME 326
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVI 301
++V M+A+ G+ LD + YV GL DKA A+L++ E + +++ SR ++
Sbjct: 327 EVVDSMKAE-GIKLDVETLSRLVKHYVSGGLKDKAKAILKEMEEI--NSEGSRWPCRILL 383
Query: 302 TQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
Y +D+V R+W+ N + + I + K ++ AEKIF+
Sbjct: 384 PLYGELQMEDEVRRLWEICGSNPHIEE--CMAAIVAWGKLKNIQEAEKIFD 432
>gi|22331104|ref|NP_188178.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273796|sp|Q9LRP6.1|PP234_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g15590, mitochondrial; Flags: Precursor
gi|11994226|dbj|BAB01348.1| DNA-binding protein [Arabidopsis thaliana]
gi|20856658|gb|AAM26678.1| AT3g15590/MQD17_5 [Arabidopsis thaliana]
gi|27363266|gb|AAO11552.1| At3g15590/MQD17_5 [Arabidopsis thaliana]
gi|332642175|gb|AEE75696.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 610
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 185/403 (45%), Gaps = 18/403 (4%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S+ +L++WV+EG+ L ++ + I R K ++ LQ+ W+ + F T A+ A +
Sbjct: 156 SVKHVLEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQ 215
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
LDL+AKV +++A + +PE + VY LL KAE I +M++
Sbjct: 216 LDLVAKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPT 275
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
N ++ + Y + KK+ ++ ME + I + T+ L+++ A D G++KIV
Sbjct: 276 SVFACNQLL-LLYSMHDRKKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIV 334
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE--VLMMHNKFSRAYDFVITQ 303
++ + G+ LD + + A Y++AGL ++A ++++ E L R+ ++
Sbjct: 335 ETIK-EEGIELDPELQSILAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRS---LLPL 390
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
YA G+ D+V R+ + QN + N I I + K +E AE +FE + +
Sbjct: 391 YADIGDSDNVRRLSRFVDQNPRYDN--CISAIKAWGKLKEVEEAEAVFERLVEKYKIFPM 448
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
L++ Y +L K L+ + G TW+ + Y+ K E K
Sbjct: 449 MPYFALMEIYTENKMLAKGRDLVKRMGNAGIAIGPSTWHALVKLYI------KAGEVGKA 502
Query: 424 ALVLLEA--GTRWKPSKECLAACLGYYKKERDIEGAD-YFIKL 463
L+L A + +P A L Y K D+ + F+K+
Sbjct: 503 ELILNRATKDNKMRPMFTTYMAILEEYAKRGDVHNTEKVFMKM 545
>gi|297836834|ref|XP_002886299.1| hypothetical protein ARALYDRAFT_319921 [Arabidopsis lyrata subsp.
lyrata]
gi|297332139|gb|EFH62558.1| hypothetical protein ARALYDRAFT_319921 [Arabidopsis lyrata subsp.
lyrata]
Length = 424
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 187/435 (42%), Gaps = 76/435 (17%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
L R + + D S+ PLL +W + G + +LR II RF HALQ+S WM ++
Sbjct: 39 LKRRIERVQDSTVSITPLLREWCQIGNQTALSELRSIITSLHRSNRFFHALQVSDWMIEQ 98
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
+ L+ D RL L AKV G+E+AA +F VP AE +
Sbjct: 99 KAYKLSSMDFERRLYLTAKVCGVEEAAKFFETVP---------------------AEDHD 137
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
++++ L+ EM+EK + +F LL++
Sbjct: 138 MVVK--------------------------------LLGEMDEKKMQPQGLSFDKLLTSY 165
Query: 233 AAAS--DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH 290
+ AS D +G++K ++ E + WT + Y++AG +K LA+LR+SE +
Sbjct: 166 SMASDLDVQGMEKFLSKWEV--MIQEKWTTFYFPGLVYLRAGFREKGLALLRRSEPSVGD 223
Query: 291 NKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC-VISSLLKFDGMESAEK 349
Y ++T Y + +DV R+W K ++ ++ + +K + ++
Sbjct: 224 RAREIIYGCLMTAYCSENLTEDVYRLWNLAKDYGISFDSSKCSDIVKAFMKKGDL---DE 280
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
+ EEW+ C +I + + + C + K + K + + ++ L+
Sbjct: 281 VMEEWDE---CPNIDLMDFGLQHRCMKEEAEKIVDMFGKKESKWESLALKVNNLVEDEDD 337
Query: 410 QNNQSEKGV-EAMKKALVLLEAGTRWKPSKECLA----ACLGYYKKERDIEGADYFIKLL 464
+ + K V EAM+ L RW P K +A AC+ Y + RD+E ++LL
Sbjct: 338 KEEERRKRVAEAMEGRL-----HDRWNP-KSSMALSAYACVQYVEGRRDMESTADILRLL 391
Query: 465 TGKE-IISADLQDRL 478
+E ++ A +DRL
Sbjct: 392 NKREQVLHAMDKDRL 406
>gi|297729251|ref|NP_001176989.1| Os12g0531500 [Oryza sativa Japonica Group]
gi|255670362|dbj|BAH95717.1| Os12g0531500 [Oryza sativa Japonica Group]
Length = 352
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 101/191 (52%), Gaps = 4/191 (2%)
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY-NRGYICVISSLLKFDGMESAE 348
H K + V Q + ++ ++ RVW++ ++ + + + Y C+++SL +F + AE
Sbjct: 117 HAKGNHGEKNVDVQSTSLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAE 176
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+ EWES + D RIPN ++ Y + G++ KAE + +G +P+ TW L GY
Sbjct: 177 SFYSEWESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGY 236
Query: 409 LQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKE 468
L + + +K +E +KKAL LE +W P+ + A +++ DIE A+ + +
Sbjct: 237 LSDGRMDKVLECLKKALSCLE---KWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREAG 293
Query: 469 IISADLQDRLL 479
++ ++ + +L
Sbjct: 294 YVTTEIYNSVL 304
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 187/406 (46%), Gaps = 33/406 (8%)
Query: 54 YRMLSPMG--------DPN------DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRF 99
Y LSP G +PN DS++ L + ++ +L +K +K+F
Sbjct: 92 YHGLSPQGQQVLRSLIEPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKF 151
Query: 100 SHALQISMWMTKKSNF--VLTPADVAIRLDLIAKVQGIEQAASYFNCVPE---KLKLPSV 154
AL+ W K+ ++ +L + VAI + ++ K + AA+ FN + E L + S
Sbjct: 152 DLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYS- 210
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN-YKKLDSLMHEM 213
Y +L++A+A + +A + ++M + G I YN ++NV+ + G + K+ SL+ +M
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM 270
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ GI D YT++ L++ C S + ++ M+A G D Y Y K+
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA-AGFSYDKVTYNALLDVYGKSHR 329
Query: 274 SDKALAVLRKSEVLMMHNKFSRA---YDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNR 329
+A+ VL + M+ N FS + Y+ +I+ YA G D+ + + + ++ K
Sbjct: 330 PKEAMKVLNE----MVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y ++S + +ESA IFEE + +I N I Y RG + + +
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEK--GV-EAMKKALVLLEAGT 432
+ G P++ TW + + QN + GV + MK+A + E T
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 124/308 (40%), Gaps = 46/308 (14%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+++A N + EK P V Y LL+ + A E A I ++MR+ G +N+
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA--MMEA 250
+ +Y G + ++ + E+ G+ D T++ LL+ G+D V+ E
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ----NGMDSEVSGVFKEM 480
Query: 251 DR-GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN 309
R G V + + T S Y + G ++A+ V R+ + S Y+ V+ A G
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS-TYNTVLAALARGGM 539
Query: 310 KDDVLRVWK-----RYKQN-------LKVYNRG-------------YICVISS---LLKF 341
+ +V R K N L Y G Y VI LLK
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 342 --------DGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
D + AE+ F E + R DI N ++ Y RR ++ KA ++ + RG
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 394 TEPNVRTW 401
P++ T+
Sbjct: 660 FTPSMATY 667
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 126/316 (39%), Gaps = 71/316 (22%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y ALL+ Y + ++A ++ +M G + YNS+++ Y + G + L ++M
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
EKG D +T++ LL SG+ +AG
Sbjct: 376 AEKGTKPDVFTYTTLL------------------------------------SGFERAGK 399
Query: 274 SDKALAVLRKSEVLMMHNKFSRA----YDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
+ A+++ + M N + ++ I Y GN+ ++ + +K+++
Sbjct: 400 VESAMSIFEE-----MRNAGCKPNICTFNAFIKMY---GNRG-------KFTEMMKIFDE 444
Query: 330 GYICVIS----------SLLKFDGMES-AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
+C +S ++ +GM+S +F+E + + N LI AY R G
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSK 438
+A T+ + G P++ T+ + + E+ +K L +E G R KP++
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS----EKVLAEMEDG-RCKPNE 559
Query: 439 ECLAACLGYYKKERDI 454
+ L Y ++I
Sbjct: 560 LTYCSLLHAYANGKEI 575
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 134/340 (39%), Gaps = 74/340 (21%)
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
++V G+ + VPE+ + L++AY+ S E+A + ++M D G+
Sbjct: 471 SEVSGVFKEMKRAGFVPER----ETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
YN+++ + G +++ + ++ EME+ ++ T+ LL A A +G+ I + ++ E
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA---NGKEIGLMHSLAE 583
Query: 250 A-------------------------------------DRGVVLDWTVYATAASGYVKAG 272
+RG D T + S Y +
Sbjct: 584 EVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQ 643
Query: 273 LSDKALAVL-------------RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLR--VW 317
+ KA VL + ++ MH SR+ DF G +++LR +
Sbjct: 644 MVAKANGVLDYMKERGFTPSMATYNSLMYMH---SRSADF--------GKSEEILREILA 692
Query: 318 KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
K K ++ YN VI + + M A +IF E + + D+ N I +Y
Sbjct: 693 KGIKPDIISYN----TVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADS 748
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ +A ++ G PN T+ + GY + N+ ++
Sbjct: 749 MFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 94/203 (46%), Gaps = 10/203 (4%)
Query: 116 VLTPADVAIRLDLI--AKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKA 171
V+ P V ++ ++ +K + +A F+ + E+ P + ++++ Y + KA
Sbjct: 589 VIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKA 648
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
++ M++RG YNS+M ++ ++ ++ K + ++ E+ KGI D +++ ++ A
Sbjct: 649 NGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYA 708
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
+ +I + M + G+V D Y T Y + ++A+ V+R ++ H
Sbjct: 709 YCRNTRMRDASRIFSEMR-NSGIVPDVITYNTFIGSYAADSMFEEAIGVVR---YMIKHG 764
Query: 292 --KFSRAYDFVITQYAACGNKDD 312
Y+ ++ Y KD+
Sbjct: 765 CRPNQNTYNSIVDGYCKLNRKDE 787
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 9/155 (5%)
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRG 182
R ++AK G+ + + E+ PS+ Y +L+ ++ + K+E I++++ +G
Sbjct: 641 RRQMVAKANGV------LDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKG 694
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ I YN+++ Y + + + EM GI D T++ + + AA S E
Sbjct: 695 IKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAI 754
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
+V M G + Y + GY K D+A
Sbjct: 755 GVVRYM-IKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
>gi|242043362|ref|XP_002459552.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
gi|241922929|gb|EER96073.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
Length = 421
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 148/330 (44%), Gaps = 14/330 (4%)
Query: 90 IKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKL 149
++K R+Y + AL+ W+ ++ D A LDL+A+ GIE A Y VPE
Sbjct: 6 LRKQRMYNK---ALKFMEWIDRRKLLNFEERDYASHLDLVARNHGIEAAEKYIERVPEAF 62
Query: 150 KLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
+ +Y LL C A+KAE + ++R+ L N M+ +Y + K +D +
Sbjct: 63 RSEVLYETLLVNCVCRDDAQKAEQVFNEIRELSLPLTVSACNQMLLLYKRVSRNKVVD-I 121
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+ ME + I +T+ +++ ++D G++ ++ +M+ + G D+ + A Y+
Sbjct: 122 LKLMENENIKPSLFTYKLMIDLKGRSNDTLGMESVLNLMK-ENGFEPDFGIQTMVAKFYI 180
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
L++KA V EV + N+ A ++ YA G DDV R+W NL +
Sbjct: 181 SGDLAEKAEEVTNAMEVYVNANR--HAIRSLLDLYAILGRPDDVERIW-----NLCTEPK 233
Query: 330 --GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
++ I + K +E AE+ F+ + + N ++ Y LL K + I
Sbjct: 234 LEDFLAAIKAWGKLGHIERAEETFDALVKTSPKLTSKYFNAMLYVYAENELLDKGKKFIE 293
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ L G + TW + Y+ + + K
Sbjct: 294 RMSLDGCPSSPLTWDAVVKLYVNSGELAKA 323
>gi|356547249|ref|XP_003542028.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 159/358 (44%), Gaps = 10/358 (2%)
Query: 74 WVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQ 133
W+ +G P+ + + + R ALQ+ W+ ++ + D + ++ K+
Sbjct: 61 WMRDGLPVHGVDVFHAVNRLRKLNMNKRALQVMEWVIRERPYRPKELDYSYLVEFTTKLH 120
Query: 134 GIEQAASYFNCVPEKLKLPSVY----IALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
GI F+ +P + + +Y IA L+ S E M++MR+ G + +
Sbjct: 121 GISHGEKLFSRIPVEFQNELLYNNLVIACLDKGVIKLSLE----YMKKMRELGFLISHLV 176
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
+N ++ ++ G K + L+ +M+ + T++IL+ A + E + K + M+
Sbjct: 177 FNRLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLVKFFSRMK 236
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN 309
+ V + Y A + A L A + E + N +S D ++ Y GN
Sbjct: 237 VAQ-VAPNEISYCILAIAHAVARLYTATEAYVEAVEKSITGNNWS-TLDVLLMLYGYLGN 294
Query: 310 KDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
+ ++ RVW ++ V ++ Y+ I + + + AE+++ E ES + N +
Sbjct: 295 QKELERVWATIRELPSVRSKSYMLAIEAFGRIGQLNQAEELWLEMESTKGLKSVEQFNSM 354
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVL 427
+ YC+ G + KA L + G +PN T+ +A G L++ +E+G++ + L L
Sbjct: 355 MSVYCKHGFIGKAAKLYKNMKASGCKPNAITYRQLALGCLKSGMAEQGLKTLDLGLRL 412
>gi|297847016|ref|XP_002891389.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337231|gb|EFH67648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 371
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 94/168 (55%), Gaps = 4/168 (2%)
Query: 71 LDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIA 130
L++W E G + +R +++ FR ++FS AL+ S WM ++ F + P D A RL+L+
Sbjct: 71 LERWRELGDQVKPSYVRGLVEDFRSTEQFSKALEASEWMCEQRVFNVFPEDYAARLNLVE 130
Query: 131 KVQGIEQAASYFNCVPEKLKLPSVYIALLNAYA-CAKSAEKAEIIMQQMRDRGLVKKTID 189
V G+E+A +F +PE ++ SVY LL +Y K+ +KAE ++MRD G + K
Sbjct: 131 TVLGLEEAEKFFERIPENMRDYSVYENLLRSYTKSEKTLDKAEDTFEKMRDLGFLSKPSP 190
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
+++M+++Y + + L +EM E + D+ I L+ + SD
Sbjct: 191 FDTMISLYRKLNKRDMVKKLKYEMMENNVKIDR---PIELNVLSIVSD 235
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 164/372 (44%), Gaps = 18/372 (4%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D LL++ E G D +I + + AL M + N + I
Sbjct: 76 DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITW----TI 131
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+D + K + +A +YF + +K +P+ Y L+N + +A +++++M++ G
Sbjct: 132 MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 191
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI 241
L + Y+++++ + + L +M E G + T++ LLS C E
Sbjct: 192 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 251
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVI 301
+ + M E RG+ D Y T +G K G D AL V + AY +I
Sbjct: 252 ELLDEMRE--RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV-AYSTLI 308
Query: 302 TQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
G D+ +++++ ++N + + ++ L K D ++ A+++ E E RN
Sbjct: 309 AGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCT 368
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
++ + LID C+ G + A+ + + +RG EPNV T+ + G+ N GV++
Sbjct: 369 PNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTN----GVDS 424
Query: 421 MKKALVLLEAGT 432
AL+L+E T
Sbjct: 425 ---ALLLMEEMT 433
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 120/299 (40%), Gaps = 45/299 (15%)
Query: 119 PADVAIRLDLIA---KVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEI 173
P DV LIA K +++A F + E P V + AL++ ++A+
Sbjct: 298 PPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQ 357
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+++ M DR I Y+S+++ +TG + + M +GI+ + T++ L+
Sbjct: 358 VLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFC 417
Query: 234 AASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
+ G+D + +ME G + D Y T G K G + +A + M
Sbjct: 418 MTN---GVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGD-----MKA 469
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
KF DV+ Y C+I K + ++ A +F
Sbjct: 470 KFCNP---------------DVIT---------------YSCLIGGFCKLERIDMARTLF 499
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
++ + + D+ + L++ YC GL+ AE L+ + P+V T+ + G+ +
Sbjct: 500 DDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCK 558
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 146/387 (37%), Gaps = 55/387 (14%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K + A F + + P+V Y +L++ + + A ++M++M G
Sbjct: 378 IDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGC 437
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ I YN++++ +TG + + L +M+ K + D T+S L+ E ID
Sbjct: 438 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKL---ERIDM 494
Query: 244 IVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYD 298
+ + + V+ D ++T GY AGL D A +L + M+ + S Y
Sbjct: 495 ARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE----MVASDCSPDVYTYT 550
Query: 299 FVITQYAACGNKDDVLRVWKR------------YKQNLKVYNRG---------------- 330
++ + G + RV KR Y + + R
Sbjct: 551 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGN 610
Query: 331 --------YICVISSLLKFDGMESAEKIFEEWESRNLCH-DIRIPNHLIDAYCRRGLLHK 381
Y +I +E A KI E E C D+ ++D CR G +
Sbjct: 611 GVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSA 670
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECL 441
A L+ + GT P + + G Q + K +E +++ + + +P+ E
Sbjct: 671 ALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEE----MTLSRKSRPNAEAY 726
Query: 442 AACLGYYKKERDIEGADYFIKLLTGKE 468
A + +E E A+ L G +
Sbjct: 727 EAVIQELAREGRHEEANALADELLGNK 753
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 86/204 (42%), Gaps = 12/204 (5%)
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVKA 271
+++G D + YT++ L A A ID+ +++ G+ + YA G K+
Sbjct: 16 KQQGFDHNVYTYNRLFEALLRARR---IDETCHILKNGWPPGITPNVFTYAVVIQGLCKS 72
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRA--YDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
G DKA +L E + A Y+FVI N L ++ + V
Sbjct: 73 GDLDKACELL---EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVIT- 128
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
+ +I L K + + A F + + + + N LI+ +C+ +H+A L+ +
Sbjct: 129 -WTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEM 187
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQ 413
+ G PNV T+ + G+ + +
Sbjct: 188 KESGLAPNVVTYSTVIHGFCRQTK 211
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 59/308 (19%), Positives = 128/308 (41%), Gaps = 41/308 (13%)
Query: 152 PSVYIALLNAYACAKSAE--KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK---- 205
P+V+ + KS + KA ++++MR+ G V YN +++ + N K
Sbjct: 57 PNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDY 116
Query: 206 ----------------LDSL------------MHEMEEKGIDCDKYTFSILLSA-CAAAS 236
+D L +M++KG +++T+++L++ C
Sbjct: 117 FRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHK 176
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSR 295
+ M E+ G+ + Y+T G+ + D A + R+ E M N +
Sbjct: 177 VHRAYLLLKEMKES--GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVT- 233
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
Y+ +++ G D+ + ++ L+ Y +++ L K ++ A K+FE+
Sbjct: 234 -YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDN 292
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
+ + D+ + LI C+ G L +A L K + EP+V T+ + G + ++
Sbjct: 293 SNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRL 352
Query: 415 EKGVEAMK 422
++ + ++
Sbjct: 353 QEAQQVLE 360
>gi|356557435|ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 161/367 (43%), Gaps = 10/367 (2%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
+S+ W+ +G P+ + I + R ALQ+ W+ ++ + D +
Sbjct: 52 ESVGSAFRSWMRDGLPVHGGDIFHAINRLRKLNMNKRALQVMEWVIRERPYRPRELDYSY 111
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSVY----IALLNAYACAKSAEKAEIIMQQMRD 180
++ K+ GI F+ +P + + +Y IA L+ S E M++MR+
Sbjct: 112 LVEFTTKLHGISHGEKLFSRIPVEFQSELLYNNLVIACLDKGVIKLSLE----YMKKMRE 167
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
G + +N ++ ++ G K + L+ +M+ + T++IL+ A + E
Sbjct: 168 LGFPISHLVFNRLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNILMKIEANEHNLEN 227
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
+ K+ M+ + V + Y A + A L A + E + N +S D +
Sbjct: 228 LVKVFGRMKVAQ-VEPNEISYCILAIAHAVARLYTATEAYVEAVEKSITGNNWS-TLDVL 285
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
+ Y GN+ ++ RVW ++ + ++ Y+ I + + + AE+I+ E +S
Sbjct: 286 LMLYGYLGNQKELERVWATIQELPSIRSKSYMLAIEAFGRIGQLNRAEEIWLEMKSTKGL 345
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
+ N ++ YC+ G + +A L + G +PN T++ +A G L++ +E+ ++
Sbjct: 346 KSVEQFNSMMSVYCKHGFIDRAAKLYKNMKASGCKPNAITYHQLALGCLKSGMAEQALKT 405
Query: 421 MKKALVL 427
+ L L
Sbjct: 406 LDLGLRL 412
>gi|91806413|gb|ABE65934.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 279
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
LL++ ++G + LR +IK R + S AL+ S WM +K F L D A RL L
Sbjct: 103 LLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYATRLHLT 162
Query: 130 AKVQGIEQAASYF-NCVPEKLKLPSVYIALLNAYA-CAKSAEKAEIIMQQMRDRGLVKKT 187
KV G+E+A ++F + +PE +K SVY LL+ YA + + KAE + ++MR+ GL K
Sbjct: 163 EKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQSKL 222
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+NS++++Y G ++ L+ +M+ K I+ D T + +L A A
Sbjct: 223 SPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANA 268
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKI-FEEWESRNL 359
++ Y G +DV RVW +YK + N + +I SLLK + AEKI + EWE L
Sbjct: 1 MSLYGEAGEIEDVHRVWDKYKATRQKDNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGL 60
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
D RIP+ L+ Y +G++ KA+ L+ K
Sbjct: 61 EFDNRIPDMLVSGYREKGMVMKADKLVNKT 90
>gi|302798615|ref|XP_002981067.1| hypothetical protein SELMODRAFT_55637 [Selaginella moellendorffii]
gi|300151121|gb|EFJ17768.1| hypothetical protein SELMODRAFT_55637 [Selaginella moellendorffii]
Length = 239
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 127/274 (46%), Gaps = 37/274 (13%)
Query: 121 DVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRD 180
D+ +RL L ++ E+A V + Y+ALL+ YA + +AE + ++M++
Sbjct: 1 DLVMRLYLTSRSGLFEEAEKILAEVHFTQRNEWAYLALLSGYASRRHVTRAEKLWRRMKE 60
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
RGL + YN+M+ +Y + + +L L EM G+ D TF ++LSA +G
Sbjct: 61 RGLTRSPHGYNNMLIMYKRKKVHSRLRQLFVEMVLSGVVPDATTFLVILSAREQIGGFQG 120
Query: 241 IDKIVAMMEADRGVV-LDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
I+K A+ ++ L W EV+M R Y F
Sbjct: 121 IEKRARHAMANLEILNLPWFTM-----------------------EVVM------RVYGF 151
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
+ G+ + V R+WKR ++ +++ ++C I + ME++E IF++ +
Sbjct: 152 L-------GDLEGVERMWKRVQRRSSLHHTSFLCAIEAFSMAGAMETSEAIFQKMGNETK 204
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
D++ +I+AYCR G+ KA+ L+ K +G
Sbjct: 205 DSDLQRHYVMIEAYCREGMTGKAQGLLRKLIAKG 238
>gi|224121668|ref|XP_002330623.1| predicted protein [Populus trichocarpa]
gi|222872227|gb|EEF09358.1| predicted protein [Populus trichocarpa]
Length = 202
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 28/199 (14%)
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
+M+ +R ++W V +AA GY+KA ++K +L++SE L+ N+ AY +++ YA
Sbjct: 5 LMKMERDSRINWKVCVSAAKGYLKASFTEKTSTMLKQSEQLIKFNERRYAYKNLLSLYAG 64
Query: 307 CGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
G+KD++ R +K + N Y+ +IS L+K DG + AE+
Sbjct: 65 TGSKDELYRFRNFFKNSAGFNNSSYLHMISLLMKSDGKDVAEE----------------- 107
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
+GL K E + + G E N ++ +A GY Q K E MKKA+
Sbjct: 108 ---------KGLWEKDEAFVRIVESSGVELNADSFVHLAAGYCVAGQMVKAAETMKKAIS 158
Query: 427 LLEAGTRWKPSKECLAACL 445
+ + WKP+ + LAACL
Sbjct: 159 I--STPEWKPNTKALAACL 175
>gi|15218232|ref|NP_175000.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75268143|sp|Q9C545.1|PPR72_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g43010
gi|12321535|gb|AAG50822.1|AC026757_3 hypothetical protein [Arabidopsis thaliana]
gi|12323053|gb|AAG51513.1|AC068324_1 hypothetical protein [Arabidopsis thaliana]
gi|332193817|gb|AEE31938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 257
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 109/213 (51%), Gaps = 8/213 (3%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S++PLL+QW ++G ++ LR +IK K F+ AL+ S WM K S F P D A +
Sbjct: 51 SIIPLLEQWRKQGYEVNPSHLRGLIKNLSDCKNFTTALEASKWMFKHSVFDNFPEDCAAQ 110
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYA-CAKSAEKAEIIMQQMRDRGLV 184
L L+ V G+E+A F +PEK++ Y LL++Y ++ +KAE ++MR+ G +
Sbjct: 111 LHLVNTVLGLEEAEKMFKNIPEKMR---DYSVLLSSYTKPVRTVDKAEATFKKMRELGFL 167
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI 244
K +NSM+ +Y Q ++ L++++++ ++ + + A + E
Sbjct: 168 LKPYLFNSMICLYGQLQRLDMVEKLLYKLKKNNMEVGSLKVNNVSRVYANINAMEKFKTW 227
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
V + G+ L+ A Y +AG +KA
Sbjct: 228 V----SKEGIELERDTIVAMAKAYHRAGSIEKA 256
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 146/314 (46%), Gaps = 14/314 (4%)
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRD 180
I +D + K + +A +YF + +K +P+ Y L+N + +A +++++M++
Sbjct: 11 TIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKE 70
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGE 239
GL + Y+++++ + + L +M E G + T++ LLS C E
Sbjct: 71 SGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDE 130
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
+ + M E RG+ D Y T +G K G D AL V + AY
Sbjct: 131 AYELLDEMRE--RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV-AYST 187
Query: 300 VITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
+I G D+ +++++ ++N + + ++ L K D ++ A+++ E E RN
Sbjct: 188 LIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
++ + LID C+ G + A+ + + +RG EPNV T+ + G+ N GV
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTN----GV 303
Query: 419 EAMKKALVLLEAGT 432
++ AL+L+E T
Sbjct: 304 DS---ALLLMEEMT 314
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 120/299 (40%), Gaps = 45/299 (15%)
Query: 119 PADVAIRLDLIA---KVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEI 173
P DV LIA K +++A F + E P V + AL++ ++A+
Sbjct: 179 PPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQ 238
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+++ M DR I Y+S+++ +TG + + M +GI+ + T++ L+
Sbjct: 239 VLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFC 298
Query: 234 AASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
+ G+D + +ME G + D Y T G K G + +A + M
Sbjct: 299 MTN---GVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGD-----MKA 350
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
KF DV+ Y C+I K + ++ A +F
Sbjct: 351 KFCNP---------------DVIT---------------YSCLIGGFCKLERIDMARTLF 380
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
++ + + D+ + L++ YC GL+ AE L+ + P+V T+ + G+ +
Sbjct: 381 DDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCK 439
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 146/387 (37%), Gaps = 55/387 (14%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K + A F + + P+V Y +L++ + + A ++M++M G
Sbjct: 259 IDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGC 318
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ I YN++++ +TG + + L +M+ K + D T+S L+ E ID
Sbjct: 319 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKL---ERIDM 375
Query: 244 IVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYD 298
+ + + V+ D ++T GY AGL D A +L + M+ + S Y
Sbjct: 376 ARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE----MVASDCSPDVYTYT 431
Query: 299 FVITQYAACGNKDDVLRVWKR------------YKQNLKVYNRG---------------- 330
++ + G + RV KR Y + + R
Sbjct: 432 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGN 491
Query: 331 --------YICVISSLLKFDGMESAEKIFEEWESRNLCH-DIRIPNHLIDAYCRRGLLHK 381
Y +I +E A K+ E E C D+ ++D CR G +
Sbjct: 492 GVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSA 551
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECL 441
A L+ + GT P + + G Q + K +E +++ + + +P+ E
Sbjct: 552 ALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEE----MTLSRKSRPNAEAY 607
Query: 442 AACLGYYKKERDIEGADYFIKLLTGKE 468
A + +E E A+ L G +
Sbjct: 608 EAVIQELAREGRHEEANALADELLGNK 634
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 137/298 (45%), Gaps = 9/298 (3%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I ++ + K Q IE S+ + + EK P V Y L+NAY E+A +M M +
Sbjct: 363 IMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGK 422
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
GL YN+++N +TG Y + ++ EM + G+ D T++ILL C +
Sbjct: 423 GLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA 482
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR--KSEVLMMHNKFSRAYDF 299
++I M + +GVV D ++ K G D+AL R K+ L N Y
Sbjct: 483 ERIFDEMPS-QGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI---YTI 538
Query: 300 VITQYAACGNKDDVLRVW-KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
+I + G + L+V + +Q + Y +++ L K + A+++F E R
Sbjct: 539 LIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 598
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ D LI+ Y + G ++KA TL R +P+V T+ + G+ + ++ EK
Sbjct: 599 VFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEK 656
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 120/270 (44%), Gaps = 18/270 (6%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +LN K +A+ + +M +RG+ + +++N Y + GN K +L M
Sbjct: 571 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMI 630
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
++ + D T++ L+ S+ E ++++ M + R + + Y +GY G
Sbjct: 631 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR-IYPNHISYGILINGYCNMGCV 689
Query: 275 DKALAVLRKSEVLMMHNKFSRAY---DFVITQYAACGN---KDDVLR--VWKRYKQNLKV 326
+A + + M+ F + ++ Y GN D+ L + K +
Sbjct: 690 SEAFRLWDE----MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGIT 745
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
YN +I+ +K + M+ A + + E+ L D+ N +++ + R+G + +AE ++
Sbjct: 746 YNT----LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIM 801
Query: 387 YKAQLRGTEPNVRTWYLMATGYL-QNNQSE 415
K RG P+ T+ + G++ QNN E
Sbjct: 802 LKMIERGVNPDRSTYTSLINGHVTQNNLKE 831
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 122/295 (41%), Gaps = 17/295 (5%)
Query: 138 AASYFNCVPEKLKLP-----SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
A F+ +P + +P S I LL+ C A K + M++ GL + Y
Sbjct: 482 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK---YFRDMKNAGLAPDNVIYTI 538
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
++ + + G + + EM E+G D T++ +L+ D++ M +R
Sbjct: 539 LIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEM-TER 597
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN--KFSRAYDFVITQYAACGNK 310
GV D+ + T +GY K G +KA+ + E+++ N Y+ +I +
Sbjct: 598 GVFPDFYTFTTLINGYXKDGNMNKAVTLF---EMMIQRNLKPDVVTYNTLIDGFCKGSEM 654
Query: 311 DDVLRVWKRYKQNLKVYNR--GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
+ V +W ++Y Y +I+ + A ++++E + I N
Sbjct: 655 EKVNELWNDMISR-RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 713
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
++ YCR G KA+ + L+G P+ T+ + G+++ ++ + K
Sbjct: 714 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNK 768
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 10/219 (4%)
Query: 72 DQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI-- 129
D+ +E+G LD+ I+ K S A ++ MT++ F D LI
Sbjct: 557 DEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF----PDFYTFTTLING 612
Query: 130 -AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
K + +A + F + ++ P V Y L++ + EK + M R +
Sbjct: 613 YXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 672
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
I Y ++N Y G + L EM EKG + T + ++ A + D+ ++
Sbjct: 673 HISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLS 732
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
M +G+V D Y T +G++K D+A A++ K E
Sbjct: 733 NMLL-KGIVPDGITYNTLINGFIKEENMDRAFALVNKME 770
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 130/317 (41%), Gaps = 25/317 (7%)
Query: 124 IRLDLIAKVQGIEQAA-SYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+R +++V+ +E +Y NC P V+ L+ Y A+ + + ++ +G
Sbjct: 263 VRKSGVSRVEIVESLVLTYGNCGSN----PLVFDLLVRTYVQARKLREGCEAFRVLKSKG 318
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
L NS++ + G + E+ G+ + YT +I+++A E
Sbjct: 319 LCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTK 378
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK------SEVLMMHNKFSRA 296
++ ME ++GV D Y T + Y + GL ++A ++ + +N
Sbjct: 379 SFLSDME-EKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 437
Query: 297 YDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWES 356
A G D++L++ + YN ++ + D M AE+IF+E S
Sbjct: 438 LCKTGKYLRAKGVLDEMLKIG--MSPDTATYN----ILLVECCRNDNMMDAERIFDEMPS 491
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ + D+ + LI + G L +A + G P+ + ++ G+ +N
Sbjct: 492 QGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRN----- 546
Query: 417 GV--EAMKKALVLLEAG 431
GV EA+K +LE G
Sbjct: 547 GVMSEALKVRDEMLEQG 563
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
L D+ VE+G + I+K Y R +A++ +++ + P + ++
Sbjct: 695 LWDEMVEKGFEATIITCNTIVKG---YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 751
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
K + +++A + N + LP V Y +LN ++ ++AE+IM +M +RG+
Sbjct: 752 GFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNP 811
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCD 221
Y S++N + N K+ + EM ++G D
Sbjct: 812 DRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 137/298 (45%), Gaps = 9/298 (3%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I ++ + K Q IE S+ + + EK P V Y L+NAY E+A +M M +
Sbjct: 259 IMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGK 318
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
GL YN+++N +TG Y + ++ EM + G+ D T++ILL C +
Sbjct: 319 GLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA 378
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR--KSEVLMMHNKFSRAYDF 299
++I M + +GVV D ++ K G D+AL R K+ L N Y
Sbjct: 379 ERIFDEMPS-QGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI---YTI 434
Query: 300 VITQYAACGNKDDVLRVW-KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
+I + G + L+V + +Q + Y +++ L K + A+++F E R
Sbjct: 435 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 494
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ D LI+ Y + G ++KA TL R +P+V T+ + G+ + ++ EK
Sbjct: 495 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEK 552
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 137/338 (40%), Gaps = 59/338 (17%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+ L++K ++QA YF + P +Y L+ + +A + +M ++G
Sbjct: 401 IGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGC 460
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
V + YN+++N + + D L EM E+G+ D YTF+ L++ + DG ++K
Sbjct: 461 VLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLING--YSKDGN-MNK 517
Query: 244 IVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR------ 295
V + E R + D Y T G+ K +K + ++ SR
Sbjct: 518 AVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNE--------LWNDMISRRIYPNH 569
Query: 296 -AYDFVITQYAACGNKDDVLRVWKRYKQN------------LKVYNRG------------ 330
+Y +I Y G + R+W + +K Y R
Sbjct: 570 ISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSN 629
Query: 331 ------------YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
Y +I+ +K + M+ A + + E+ L D+ N +++ + R+G
Sbjct: 630 MLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGR 689
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYL-QNNQSE 415
+ +AE ++ K RG P+ T+ + G++ QNN E
Sbjct: 690 MQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKE 727
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 112/265 (42%), Gaps = 19/265 (7%)
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS 230
AE I +M +G+V + +++++ + + G + +M+ G+ D ++IL+
Sbjct: 378 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 437
Query: 231 A-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
C E + M+E +G VLD Y T +G K + +A + + +
Sbjct: 438 GFCRNGVMSEALKVRDEMLE--QGCVLDVVTYNTILNGLCKEKMLSEADELFTE---MTE 492
Query: 290 HNKFSRAYDF--VITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMES 346
F Y F +I Y+ GN + + +++ Q NLK Y +I K ME
Sbjct: 493 RGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEK 552
Query: 347 AEKIFEEWESRNLCHDIRIPNH-----LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+++ + SR + PNH LI+ YC G + +A L + +G E + T
Sbjct: 553 VNELWNDMISRRI-----YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITC 607
Query: 402 YLMATGYLQNNQSEKGVEAMKKALV 426
+ GY + + K E + L+
Sbjct: 608 NTIVKGYCRAGNAVKADEFLSNMLL 632
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 10/219 (4%)
Query: 72 DQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI-- 129
D+ +E+G LD+ I+ K S A ++ MT++ F D LI
Sbjct: 453 DEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF----PDFYTFTTLING 508
Query: 130 -AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+K + +A + F + ++ P V Y L++ + EK + M R +
Sbjct: 509 YSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 568
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
I Y ++N Y G + L EM EKG + T + ++ A + D+ ++
Sbjct: 569 HISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLS 628
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
M +G+V D Y T +G++K D+A A++ K E
Sbjct: 629 NMLL-KGIVPDGITYNTLINGFIKEENMDRAFALVNKME 666
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 131/319 (41%), Gaps = 29/319 (9%)
Query: 124 IRLDLIAKVQGIEQAA-SYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+R +++V+ +E +Y NC P V+ L+ Y A+ + + ++ +G
Sbjct: 159 VRKSGVSRVEIVESLVLTYGNCGSN----PLVFDLLVRTYVQARKLREGCEAFRVLKSKG 214
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
L NS++ + G + E+ G+ + YT +I+++A E
Sbjct: 215 LCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTK 274
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYD 298
++ ME ++GV D Y T + Y + GL ++A ++ M K + Y+
Sbjct: 275 SFLSDME-EKGVFPDVVTYNTLINAYCRQGLLEEAFELMDS-----MSGKGLKPCVFTYN 328
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNLKVY----NRGYICVISSLLKFDGMESAEKIFEEW 354
+I G LR + LK+ Y ++ + D M AE+IF+E
Sbjct: 329 AIINGLCKTG---KYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 385
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
S+ + D+ + LI + G L +A + G P+ + ++ G+ +N
Sbjct: 386 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRN--- 442
Query: 415 EKGV--EAMKKALVLLEAG 431
GV EA+K +LE G
Sbjct: 443 --GVMSEALKVRDEMLEQG 459
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 8/159 (5%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
L D+ VE+G + I+K Y R +A++ +++ + P + ++
Sbjct: 591 LWDEMVEKGFEATIITCNTIVKG---YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 647
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
K + +++A + N + LP V Y +LN ++ ++AE+IM +M +RG+
Sbjct: 648 GFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNP 707
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG-IDCDKY 223
Y S++N + N K+ + EM ++G + DK+
Sbjct: 708 DRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDKF 746
>gi|449474117|ref|XP_004154078.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like, partial [Cucumis sativus]
Length = 263
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Query: 105 ISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYAC 164
S W+ D A R+ LIAKVQG+ +A SY +P+ + V+ ALL Y
Sbjct: 52 FSEWLEANGQLEFNERDYASRVHLIAKVQGLHKAESYIAKIPKSFQGEVVHRALLANYVV 111
Query: 165 AKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYT 224
A + EKAE + +++D YN M+ V Y+ + +K+ ++ ME++ I +T
Sbjct: 112 ANNVEKAEEVFNKIKDLEFPMSIFAYNQML-VLYKKIDRRKIADVLLLMEKENIKPCPFT 170
Query: 225 FSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS 284
+ IL+ ++D G++++V M+A+ G+ LD + + A YV GL KA A+L++
Sbjct: 171 YKILIDGKGLSNDISGMEQVVDSMKAE-GIELDVSTLSLLAKHYVSCGLKVKAKAILKEI 229
Query: 285 EVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK 318
E N ++ Y +D+V R+W+
Sbjct: 230 EE-TNSNGPQWLCRILLPFYGKLQMEDEVRRLWE 262
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 139/302 (46%), Gaps = 10/302 (3%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K I++A S F+ + +P+V Y AL+N A E+A +++ M D+G+
Sbjct: 367 IDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGV 426
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILLSACAAASDGEGID 242
I Y+ +++ + + + L+H M +G + TF SI+ C + GE
Sbjct: 427 TPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAF- 485
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
++ M G+V D Y T G + G + +A A+L M + + A++ I
Sbjct: 486 QMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDA-----MPDPDTYAFNCCIN 540
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
+ G+ L+V+ R + V ++ + +I+ K E A +FEE ++NL
Sbjct: 541 GLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQP 600
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
D+ LID C+ G + A ++ G PNV T+ + G ++ + E+ + +
Sbjct: 601 DVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFL 660
Query: 422 KK 423
++
Sbjct: 661 EE 662
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 142/336 (42%), Gaps = 59/336 (17%)
Query: 135 IEQAASYF------NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
IE+A + CVP+ + Y +L+ A A + A ++ +++ G T+
Sbjct: 653 IEEACQFLEEMVSSGCVPDSI----TYGSLVYALCRASRTDDALQLVSELKSFGWDPDTV 708
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMM 248
YN +++ +++G ++ +++ EM KG D T++ L+ + A D E ++ M
Sbjct: 709 TYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDM 768
Query: 249 EA--DRGVVLDWTVYATAASGYVKAGLSDKALAV----LRKS-EVL---MMHNKF----- 293
+ R V + Y+ +G K G D+A + +RKS +VL + +N F
Sbjct: 769 SSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLC 828
Query: 294 -------------------------SRAYDFVITQYAACGNKDDVLRVWKR-----YKQN 323
+ + +I CG D+ V+ Y N
Sbjct: 829 KQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPN 888
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
+ YN +++ L K D ME A + E + + D+ + L+DA+C+ + +A
Sbjct: 889 VVTYNV----LMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEAL 944
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
L++ RG PNV T+ + G +++QS + +
Sbjct: 945 ELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQ 980
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 135/323 (41%), Gaps = 31/323 (9%)
Query: 75 VEEGRPLDMEQLR---IIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR------ 125
++E R L E +R ++ Y F L M + + + D ++R
Sbjct: 796 IDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTV 855
Query: 126 -----LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQM 178
+D + K ++A + F+ + +P+V Y L+N E+A +++ M
Sbjct: 856 TFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESM 915
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILLSACAAASD 237
D+G+ I Y+ +++ + + + + L+H M +G + TF SI+ C +
Sbjct: 916 VDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQS 975
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM--MHNKFSR 295
GE ++ M G+ D Y T G + G + +A EVL+ M + +
Sbjct: 976 GEAF-QMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQA-------EVLLDAMPDPDTY 1027
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEW 354
A++ I + G DV R R + V ++ + +I+ K E A +FEE
Sbjct: 1028 AFNCCINGLSKLG---DVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEM 1084
Query: 355 ESRNLCHDIRIPNHLIDAYCRRG 377
++NL D+ LID C+ G
Sbjct: 1085 VAKNLQPDVMTFGALIDGLCKAG 1107
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 127/310 (40%), Gaps = 53/310 (17%)
Query: 165 AKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYT 224
++A EI +M G+ + YN+++N ++ L E+ E+G D T
Sbjct: 194 GETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVT 253
Query: 225 FSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL--- 281
++ L+ + A D E ++ M + R V + Y+ +G K G D+A ++
Sbjct: 254 YNTLIDSLCKAGDLEEARRLHGDMSS-RSCVPNVVTYSVLINGLCKVGRIDEARELIQEM 312
Query: 282 -RKS-EVL---MMHNKF------------------------------SRAYDFVITQYAA 306
RKS +VL + +N F + + +I
Sbjct: 313 TRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCK 372
Query: 307 CGNKDDVLRVWKR-----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
CG D+ V+ Y N+ YN +++ L K D ME A + E + +
Sbjct: 373 CGQIDEACSVFDDMIAGGYVPNVITYNA----LVNGLCKADKMERAHAMIESMVDKGVTP 428
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE-- 419
D+ + L+DA+C+ + +A L++ RG PNV T+ + G ++++S + +
Sbjct: 429 DVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMF 488
Query: 420 ---AMKKALV 426
A+K LV
Sbjct: 489 DDMALKHGLV 498
>gi|449457829|ref|XP_004146650.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 222
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 70/128 (54%), Gaps = 33/128 (25%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
LYR +SP+GDPN S+ PLLDQWV E + ++LR IIK+ R+YKRF HAL++
Sbjct: 31 LYRRISPVGDPNISVTPLLDQWVLESGLVQQDELRHIIKELRVYKRFKHALEVE------ 84
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
YFN +P +LK V+IALLN YA K A+KA
Sbjct: 85 ---------------------------DYFNNMPSQLKRCQVHIALLNCYAHEKYADKAN 117
Query: 173 IIMQQMRD 180
++Q++++
Sbjct: 118 AVLQKIKE 125
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 32/38 (84%)
Query: 342 DGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
+ ++ AE+I++EWE++ L +D+RIPN L+DAYCR GL+
Sbjct: 183 NDIKGAERIYKEWETQKLSYDLRIPNLLVDAYCRAGLM 220
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 137/298 (45%), Gaps = 9/298 (3%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I ++ + K Q IE S+ + + EK P V Y L+NAY E+A +M M +
Sbjct: 102 IMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGK 161
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
GL YN+++N +TG Y + ++ EM + G+ D T++ILL C +
Sbjct: 162 GLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA 221
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR--KSEVLMMHNKFSRAYDF 299
++I M + +GVV D ++ K G D+AL R K+ L N Y
Sbjct: 222 ERIFDEMPS-QGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI---YTI 277
Query: 300 VITQYAACGNKDDVLRVW-KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
+I + G + L+V + +Q + Y +++ L K + A+++F E R
Sbjct: 278 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 337
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ D LI+ Y + G ++KA TL R +P+V T+ + G+ + ++ EK
Sbjct: 338 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEK 395
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 137/338 (40%), Gaps = 59/338 (17%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+ L++K ++QA YF + P +Y L+ + +A + +M ++G
Sbjct: 244 IGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGC 303
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
V + YN+++N + + D L EM E+G+ D YTF+ L++ + DG ++K
Sbjct: 304 VLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLING--YSKDGN-MNK 360
Query: 244 IVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR------ 295
V + E R + D Y T G+ K +K + ++ SR
Sbjct: 361 AVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNE--------LWNDMISRRIYPNH 412
Query: 296 -AYDFVITQYAACGNKDDVLRVWKRYKQN------------LKVYNRG------------ 330
+Y +I Y G + R+W + +K Y R
Sbjct: 413 ISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSN 472
Query: 331 ------------YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
Y +I+ +K + M+ A + + E+ L D+ N +++ + R+G
Sbjct: 473 MLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGR 532
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYL-QNNQSE 415
+ +AE ++ K RG P+ T+ + G++ QNN E
Sbjct: 533 MQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKE 570
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 112/265 (42%), Gaps = 19/265 (7%)
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS 230
AE I +M +G+V + +++++ + + G + +M+ G+ D ++IL+
Sbjct: 221 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 280
Query: 231 A-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
C E + M+E +G VLD Y T +G K + +A + + +
Sbjct: 281 GFCRNGVMSEALKVRDEMLE--QGCVLDVVTYNTILNGLCKEKMLSEADELFTE---MTE 335
Query: 290 HNKFSRAYDF--VITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMES 346
F Y F +I Y+ GN + + +++ Q NLK Y +I K ME
Sbjct: 336 RGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEK 395
Query: 347 AEKIFEEWESRNLCHDIRIPNH-----LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+++ + SR + PNH LI+ YC G + +A L + +G E + T
Sbjct: 396 VNELWNDMISRRI-----YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITC 450
Query: 402 YLMATGYLQNNQSEKGVEAMKKALV 426
+ GY + + K E + L+
Sbjct: 451 NTIVKGYCRAGNAVKADEFLSNMLL 475
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 10/219 (4%)
Query: 72 DQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI-- 129
D+ +E+G LD+ I+ K S A ++ MT++ F D LI
Sbjct: 296 DEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF----PDFYTFTTLING 351
Query: 130 -AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+K + +A + F + ++ P V Y L++ + EK + M R +
Sbjct: 352 YSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 411
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
I Y ++N Y G + L EM EKG + T + ++ A + D+ ++
Sbjct: 412 HISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLS 471
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
M +G+V D Y T +G++K D+A A++ K E
Sbjct: 472 NMLL-KGIVPDGITYNTLINGFIKEENMDRAFALVNKME 509
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 129/317 (40%), Gaps = 25/317 (7%)
Query: 124 IRLDLIAKVQGIEQAA-SYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+R +++V+ +E +Y NC P V+ L+ Y A+ + + ++ +G
Sbjct: 2 VRKSGVSRVEIVESLVLTYGNCGSN----PLVFDLLVRTYVQARKLREGCEAFRVLKSKG 57
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
L NS++ + G + E+ G+ + YT +I+++A E
Sbjct: 58 LCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTK 117
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYD 298
++ ME ++GV D Y T + Y + GL ++A ++ M K + Y+
Sbjct: 118 SFLSDME-EKGVFPDVVTYNTLINAYCRQGLLEEAFELMDS-----MSGKGLKPCVFTYN 171
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNLKVY----NRGYICVISSLLKFDGMESAEKIFEEW 354
+I G LR + LK+ Y ++ + D M AE+IF+E
Sbjct: 172 AIINGLCKTGK---YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 228
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
S+ + D+ + LI + G L +A + G P+ + ++ G+ +N
Sbjct: 229 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 288
Query: 415 EKGVEAMKKALVLLEAG 431
EA+K +LE G
Sbjct: 289 S---EALKVRDEMLEQG 302
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
L D+ VE+G + I+K Y R +A++ +++ + P + ++
Sbjct: 434 LWDEMVEKGFEATIITCNTIVKG---YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 490
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
K + +++A + N + LP V Y +LN ++ ++AE+IM +M +RG+
Sbjct: 491 GFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNP 550
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGI 218
Y S++N + N K+ + EM ++G
Sbjct: 551 DRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 583
>gi|225434953|ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Vitis vinifera]
Length = 550
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 175/403 (43%), Gaps = 9/403 (2%)
Query: 59 PMGDPNDSMVPLLDQ-WVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVL 117
P G+P V L Q W+ EG P+ + I + R K AL++ W+ ++ +
Sbjct: 92 PRGEP----VGLAFQSWMGEGCPIHRGHIFHAINRLRKLKFNKRALEVMEWVVRERPYRP 147
Query: 118 TPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQ 177
D + L+ K+ GI Q F+ VP + + +Y L+ A + M++
Sbjct: 148 KELDYSYLLEFTTKLHGISQGEKLFSHVPLEFQNELLYNNLVIACLDKGVIRLSLAYMKK 207
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
MR+ G + +N ++ ++ K + ++ +M+ + T++IL+ A +
Sbjct: 208 MRELGHPISYLVFNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIEANEHN 267
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY 297
EG+ K+ M+ + V + Y A+ + A L A A + E + N +S
Sbjct: 268 IEGLVKVFGEMKQQQ-VEPNEVSYCLLATAHAVAKLYTVAEAYVEAVEKSITGNNWS-TL 325
Query: 298 DFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
D +I Y G D+ R W ++ V ++ Y+ I + + + AE+++ E +S+
Sbjct: 326 DVLIILYGYLGKPTDLERTWGIVQELPHVRSKSYMLAIEAFGRIGQLNRAEELWLEIKSK 385
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
N +I Y + G + KA L + ++ G + N T+ +A G L+ E+
Sbjct: 386 KELKSTEQFNSMISVYSKHGFIDKASGLFREMEMNGCKANAITYRNLALGCLKAGLLEEA 445
Query: 418 VEAMK--KALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
++ ++ K L + + P E + + + + D+E A+
Sbjct: 446 LKTLELGKGLTISTRIRKSIPWLETTLSIVEIFSENGDVENAE 488
>gi|297847014|ref|XP_002891388.1| hypothetical protein ARALYDRAFT_336905 [Arabidopsis lyrata subsp.
lyrata]
gi|297337230|gb|EFH67647.1| hypothetical protein ARALYDRAFT_336905 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Query: 74 WVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQ 133
W E+G + +R +IK F + + S AL+ S WM ++ F + D A RL L+ V
Sbjct: 44 WSEQGDQVKPSYVRGVIKNFHDFNQCSKALEASEWMCEQKFFNIFSEDYAARLHLVETVL 103
Query: 134 GIEQAASYFNCVPEKLKLPSVYIALLNAYA-CAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
G+E+A +F +PE ++ SVY LL +Y K+ +KAE ++MRD G + K +NS
Sbjct: 104 GLEEAEKFFESIPENMRDYSVYDNLLRSYTKSEKTLDKAEATFEKMRDLGFLLKPSPFNS 163
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG 238
M+++Y + L EM E + D + +L+ + D
Sbjct: 164 MISLYRHLKKKDMVKKLEREMMENDVRFDSHKELNVLTILSTCKDS 209
>gi|413917311|gb|AFW57243.1| hypothetical protein ZEAMMB73_018964 [Zea mays]
Length = 514
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 153/338 (45%), Gaps = 2/338 (0%)
Query: 74 WVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQ 133
W+ +GR + + I + R ++ ALQ+ W+ ++ + L+ D + L+ AKV
Sbjct: 68 WMADGRAVHRGHVFHAINRLRRHRLHRTALQVMEWIVRERPYKLSELDYSYLLEFTAKVH 127
Query: 134 GIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
GI +A S F VP++ + +Y L+ A + + M++MR+ L YN +
Sbjct: 128 GISEAESLFLRVPQECRKELLYNNLVMAALDLNHIKHSYAYMRKMRELSLPISPYVYNRL 187
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
+ ++ G K + ++ +M+ + T++ILL A + +G+ ++ M+ +
Sbjct: 188 IILHSSPGRRKTISKILSQMKADRVVPHTSTYNILLKIQANEHNIDGLARVFNGMKRAK- 246
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDV 313
+ + Y A + A L + E M +S + ++ Y G + ++
Sbjct: 247 IEPNEITYGILAIAHAVARLYTVCHTYVEAIENSMTGTNWS-TLEILLILYGYLGKEKEL 305
Query: 314 LRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAY 373
R W+ + + ++ + I + K ++ AEKI+ +S N ++ Y
Sbjct: 306 KRTWEIMQDLPHIRSKSFTLAIEAFGKVGSIDQAEKIWIHIKSTKKLSLTEQFNSMLSVY 365
Query: 374 CRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
CR G++ KA ++ + + G +PN T+ +A G L++
Sbjct: 366 CRHGVVDKASSVFKEMRANGCQPNAITYRHLALGCLKS 403
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 163/360 (45%), Gaps = 25/360 (6%)
Query: 89 IIKKFRLYKRFSHALQISMWMTKKSNF--VLTPADVAIRLDLIAKVQGIEQAASYFNCV- 145
IIK YK+ A+ + W+ ++ +F VL + VA+ + ++ K + A+S N +
Sbjct: 150 IIKGLGFYKKCDMAMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLR 209
Query: 146 PEKLKLPS-VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NY 203
+ L Y +L+ AYA A ++ ++M + G I YN ++NVY + G +
Sbjct: 210 KDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPW 269
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYAT 263
K+ L+H M+ G+ D YT++ L+S C S E ++ M+ G D + T
Sbjct: 270 SKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLS-GFSPDKVTFNT 328
Query: 264 AASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA---YDFVITQYAACGNKDDVLRVWKRY 320
Y K+ +A+ VL++ E + FS + Y+ +I+ YA +D +LR
Sbjct: 329 LLDVYGKSRRPKEAMEVLKEMEF----SGFSPSIVTYNSLISAYA----RDGLLREAMEL 380
Query: 321 K-----QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
K + +K Y ++S K E A +IF E + +I N LI +
Sbjct: 381 KDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGN 440
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK--GV-EAMKKALVLLEAGT 432
RG + + + ++ P++ TW + + QN + GV + MK+A + E T
Sbjct: 441 RGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDT 500
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 132/305 (43%), Gaps = 42/305 (13%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
E+A + ++M+ G + +N++++VY ++ K+ ++ EME G T++ L
Sbjct: 305 EEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSL 364
Query: 229 LSACAAASDG---EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
+S A A DG E ++ M+E +G+ D Y T SG+ KAG+ + A+ + +
Sbjct: 365 IS--AYARDGLLREAMELKDQMVE--KGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMR 420
Query: 286 VLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC----------VI 335
++ +I + GN+ R+ + +KV+ IC +
Sbjct: 421 AAGCKPNIC-TFNALIKMH---GNRG-------RFAEMMKVFEEIEICNCAPDIVTWNTL 469
Query: 336 SSLLKFDGMES-AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR-G 393
++ +GM+S +F+E + + N LI AY R G +A +YK L G
Sbjct: 470 LAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQA-MAVYKRMLEAG 528
Query: 394 TEPNVRTWYLMATGYLQNN---QSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKK 450
P++ ++ + + QSEK MK R KP++ + L Y
Sbjct: 529 VTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDG--------RCKPNELTYCSLLHAYAN 580
Query: 451 ERDIE 455
++IE
Sbjct: 581 SKEIE 585
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 123/288 (42%), Gaps = 13/288 (4%)
Query: 136 EQAASYFNCVPEKLKLPS------VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
E+AA F E++KL + LL+ Y ++ ++A ++++M G +
Sbjct: 305 EEAAQVF----EEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVT 360
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
YNS+++ Y + G ++ L +M EKGI D +T++ LLS A E +I M
Sbjct: 361 YNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMR 420
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN 309
A G + + + G + + V + E+ ++ ++ + G
Sbjct: 421 A-AGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIV-TWNTLLAVFGQNGM 478
Query: 310 KDDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
+V V+K K+ V R + +IS+ + + A +++ + D+ N
Sbjct: 479 DSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNA 538
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
++ A R GL ++E + + + +PN T+ + Y + + E+
Sbjct: 539 VLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIER 586
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 90/196 (45%), Gaps = 8/196 (4%)
Query: 77 EGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIE 136
E P+ ++ L ++ K L HA + + KK + L+ + I + + Q +
Sbjct: 600 EPVPVLLKTLVLVNSKCDLLMETEHAFE---ELKKKGSPDLSTLNAMIAI--YGRRQMVA 654
Query: 137 QAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
+A N + E PS+ Y +L+ ++ +++ E++E +++++ +GL I YN+++
Sbjct: 655 KANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVI 714
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGV 254
Y + G K + M+ G+ D T++ +++ AA S E +V M G
Sbjct: 715 FAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYM-IKHGC 773
Query: 255 VLDWTVYATAASGYVK 270
+ Y + GY K
Sbjct: 774 KRNQNTYNSIVDGYCK 789
>gi|242078281|ref|XP_002443909.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
gi|241940259|gb|EES13404.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
Length = 521
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 155/338 (45%), Gaps = 2/338 (0%)
Query: 74 WVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQ 133
W+ +GR + + I + R ++ ALQ+ W+ ++ + L+ D + L+ AKV
Sbjct: 75 WMADGRAVHRGHVFHAINRLRRHRLHRTALQVMEWIVRERPYKLSELDYSYLLEFTAKVH 134
Query: 134 GIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
GI +A S F VP++ + +Y L+ A + + M++MR+ L YN +
Sbjct: 135 GISEAESLFLRVPQEYQKELLYNNLVMAALDLDLIKHSYAYMRKMRELSLPISPYVYNRL 194
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
+ ++ K + ++++M+ + T++ILL A + +G+ ++ + M+ +
Sbjct: 195 IILHSSPSRRKTISKILYQMKADRVTPHTSTYNILLKIQANEHNIDGLARVFSDMKRAK- 253
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDV 313
+ + Y A + A L + E M +S + ++ Y G + ++
Sbjct: 254 IEPNEITYGILAISHAVARLYTVCHTYVEAIENSMTGTNWS-TLEILLILYGYLGKEKEL 312
Query: 314 LRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAY 373
R W+ + V ++ + I + K ++ AEKI+ + +S N ++ Y
Sbjct: 313 KRTWEIMQDLPHVRSKSFTVAIEAFGKVGSIDQAEKIWVQIKSTKKLSLTEQFNSILSVY 372
Query: 374 CRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
CR G++ KA ++ + + G +PN T+ +A G L++
Sbjct: 373 CRHGVVDKASSVFKEMRANGCQPNAITYRHLALGCLKS 410
>gi|302801570|ref|XP_002982541.1| hypothetical protein SELMODRAFT_421992 [Selaginella moellendorffii]
gi|300149640|gb|EFJ16294.1| hypothetical protein SELMODRAFT_421992 [Selaginella moellendorffii]
Length = 487
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 82/158 (51%)
Query: 86 LRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCV 145
LR+II + R RF ALQIS WM F + D+ +RL L ++ E+A V
Sbjct: 106 LRVIIARLRRRSRFLQALQISNWMFHDRRFTVATQDLVMRLYLTSRSGLFEEAEKILAEV 165
Query: 146 PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
+ Y+ALL+ YA + +AE + ++M++RGL K YN+M+ +Y + + +
Sbjct: 166 HFTQRNEWAYLALLSGYASRRHVTRAEKLWRRMKERGLTKSPHGYNNMLIMYKRKKLHSR 225
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
L L EM G+ D TF ++LSA +GI+K
Sbjct: 226 LRQLFVEMVLSGVVPDATTFLVILSAREQIGGFQGIEK 263
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 151/328 (46%), Gaps = 16/328 (4%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLP--SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
AK + +A S+ V P + +A++ A A E+AE I +++++ GL+ +
Sbjct: 266 FAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPR 325
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
T YN+++ Y +TG+ K +S++ EME G D++T+S+L+ A A A E ++
Sbjct: 326 TRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLK 385
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDFVITQ 303
MEA GV + V++ + Y G K+ VLR+ M ++ S Y+ +I
Sbjct: 386 EMEAS-GVRPNSYVFSRILASYRDRGKWQKSFQVLRE----MRNSGVSPDRHFYNVMIDT 440
Query: 304 YAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
+ C D L + R + + ++ + +I K AE++FE +
Sbjct: 441 FGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPC 500
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
N +I+++ + +TL+ K Q +G NV T+ + Y Q+ + + +E ++
Sbjct: 501 TTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLE 560
Query: 423 KALVLLEAGTRWKPSKECLAACLGYYKK 450
V+ G KPS A + Y +
Sbjct: 561 ---VMKSVG--LKPSSTMYNALINAYAQ 583
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 105/276 (38%), Gaps = 42/276 (15%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P Y AL+ A A EKA +M +MR G ++Y+ ++ +T
Sbjct: 184 PLTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNK--------- 234
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
SD + KI A +E+D+ + LD + G+ K+
Sbjct: 235 ------------------------SDSSMLQKIYAEIESDK-IELDGQLLNDIIVGFAKS 269
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDF---VITQYAACGNKDDVLRVWKRYKQ-NLKVY 327
G ++A++ L ++ N S VIT G ++ +++ K+ L
Sbjct: 270 GDVNRAMSFL----AMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPR 325
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
R Y ++ +K ++ AE I E E D + LIDAY G A ++
Sbjct: 326 TRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLK 385
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ + G PN + + Y + +K + +++
Sbjct: 386 EMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLRE 421
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 109/251 (43%), Gaps = 13/251 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++AYA A E A I++++M G+ + ++ ++ Y G ++K ++ EM
Sbjct: 363 TYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREM 422
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR--GVVLDWTVYATAASGYVKA 271
G+ D++ +++++ + +D +A + R GV D + T + K+
Sbjct: 423 RNSGVSPDRHFYNVMIDTFGKCN---CLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKS 479
Query: 272 GLSDKA---LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-KRYKQNLKVY 327
G +KA +++S + + Y+ +I + +DV + K Q L
Sbjct: 480 GHHNKAEELFEAMQESGC----SPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLAN 535
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y ++ + + A + E +S L + N LI+AY +RGL +A
Sbjct: 536 VVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFR 595
Query: 388 KAQLRGTEPNV 398
+ G +P+V
Sbjct: 596 VMRADGLKPSV 606
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 131 KVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
K + + +A C P + Y ++N++ + E + ++ +M+ +GL+ + Y
Sbjct: 484 KAEELFEAMQESGCSP----CTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTY 539
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA 250
+++++Y Q+G +K + M+ G+ ++ L++A A E +M A
Sbjct: 540 TTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRA 599
Query: 251 D 251
D
Sbjct: 600 D 600
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
++Y AL+NAYA +E+A + MR GL + NS++N + + + S++
Sbjct: 572 TMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQY 631
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
M+E + D T++ L+ A E DK+ A+ E
Sbjct: 632 MKENDLKPDVVTYTTLMKALIRV---EKFDKVPAVYE 665
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 141/304 (46%), Gaps = 7/304 (2%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I +D + KV ++A F + + +PS+ Y +L++ + CA E+++ ++ +M D+
Sbjct: 220 IIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQ 279
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
GL + +N +++ + G + L+ M E GI D T++ L+ D
Sbjct: 280 GLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSA 339
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFV 300
++ M + +G D Y +GY K ++A+ + +E+L++ + + YD +
Sbjct: 340 RELFVSMPS-KGCEPDVISYNVLINGYSKTLKVEEAMKLY--NEMLLVGKRPNVITYDSL 396
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNL 359
+ G DD +++ K + N Y + L K D + A K+F E +S N
Sbjct: 397 LKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNF 456
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+I N LID C+ G L A L K G EPNV T+ +M G+ + Q +K
Sbjct: 457 KLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANV 516
Query: 420 AMKK 423
++K
Sbjct: 517 LIQK 520
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Query: 111 KKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSA 168
K SNF L ++ +D + K +E A F + + P+V Y +++ +
Sbjct: 452 KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQV 511
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
+KA +++Q+M G I YN++M +Y++ +++ L+H M +K + D T SI+
Sbjct: 512 DKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIV 571
Query: 229 L 229
+
Sbjct: 572 V 572
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 114/251 (45%), Gaps = 16/251 (6%)
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMM 248
+N +++ + +Y ++ SL ++M G+ D+ T +ILL+ C EG ++
Sbjct: 72 FNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGIL 131
Query: 249 EADRGVVLDWTVYATAASGY-VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC 307
RG + Y T G ++ +S+ LR ++ + + Y +I
Sbjct: 132 R--RGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVT--YGTLIKGLCGT 187
Query: 308 GNKDDVLRVWK-------RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
GN + L++ + RY+ N K Y ++ L K + A+++FEE +++ +
Sbjct: 188 GNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMI 247
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
I N LI +C G +++ L+ + +G +P++ T+ ++ + K +EA
Sbjct: 248 PSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEG---KVIEA 304
Query: 421 MKKALVLLEAG 431
K V++E+G
Sbjct: 305 KKLLGVMIESG 315
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 125/346 (36%), Gaps = 59/346 (17%)
Query: 137 QAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
A +F+ + PS+ + LL+ A K + + QMR GL N ++
Sbjct: 52 HALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILL 111
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRG 253
N ++ + + +G + T++ L+ C E + M + G
Sbjct: 112 NCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKL--G 169
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----------AYDFVITQ 303
D Y T G G + AL + ++ M N SR Y+ ++
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQE-----MLNDISRYEINCKPNVITYNIIVDG 224
Query: 304 YAACGNKDDVLRVWKRYKQ-----NLKVYN---RGYIC---------------------- 333
G +D+ ++++ K ++ YN G+ C
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPD 284
Query: 334 ------VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
+I +L K + A+K+ + D+ N LI+ +C G L+ A L
Sbjct: 285 MVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFV 344
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTR 433
+G EP+V ++ ++ GY + + E EAMK +L G R
Sbjct: 345 SMPSKGCEPDVISYNVLINGYSKTLKVE---EAMKLYNEMLLVGKR 387
>gi|302811145|ref|XP_002987262.1| hypothetical protein SELMODRAFT_426086 [Selaginella moellendorffii]
gi|300144897|gb|EFJ11577.1| hypothetical protein SELMODRAFT_426086 [Selaginella moellendorffii]
Length = 564
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 161/346 (46%), Gaps = 16/346 (4%)
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
RLDL ++ + + F +P++ + Y LL Y E AE MQ++R G +
Sbjct: 73 RLDLCSRCHHVTRTLLLFRRLPKQWRSEDAYCILLELYYKRDMLEDAEKTMQELRGIG-I 131
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC-AAASDGEGIDK 243
K Y+ M++ Y G + + ++ E++ G+ D+ ++ILL+A + D ++
Sbjct: 132 KSLQPYHLMLSFYKLRGMEMRFERMVTEIKGSGLALDRSFYTILLAARDSFGGDMVAVED 191
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF---V 300
++A ME RG+ LD A Y+++GL K+ VL++ E + +F + +
Sbjct: 192 VLAEMEG-RGLKLDAVGCLAVAGIYLRSGLRHKSERVLQRLEKSLKSGEFKDSNSIRRRM 250
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
+ + G++D V R+W +++ +I I + + M+ AE ++ N C
Sbjct: 251 LAMFGKLGDRDAVDRIWHSIERSASTTVEDFIFGIEAFGRVGKMDEAEDMYMRVGC-NSC 309
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV-- 418
+ R+ N + +G + +A L+ + + + T++L+ YL+ +
Sbjct: 310 NP-RLHNAFLAVLVEQGDVIRAVALVERMKGVRCLLSTVTYHLLIKVYLKAGDVSRATLA 368
Query: 419 -EAMKKALVLLEAGTRW-KPSKECLAACLGYYKKERDIEGADYFIK 462
E+++ A LE W +PS E LA L ++ D++ ++ +K
Sbjct: 369 FESLRSAFGKLE----WPRPSSETLAVMLEFFVGIGDVQASERLVK 410
>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 123/285 (43%), Gaps = 44/285 (15%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLP--SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
AK + +A S+ V P + +A++ A A E+AE I +++++ GL+ +
Sbjct: 337 FAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPR 396
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
T YN+++ Y +TG+ K +S++ EME G D++T+S+L+ A A A E ++
Sbjct: 397 TRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLK 456
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDFVITQ 303
MEA GV + V++ + Y G K+ VLR+ M ++ S Y+ +I
Sbjct: 457 EMEAS-GVRPNSYVFSRILASYRDRGKWQKSFQVLRE----MRNSGVSPDRHFYNVMIDT 511
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
+ C D L + R + ME + W
Sbjct: 512 FGKCNCLDHALATFDRMR----------------------MEGVQPDAVTW--------- 540
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
N LID +C+ G +KAE L Q G P T+ +M +
Sbjct: 541 ---NTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSF 582
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 102/242 (42%), Gaps = 11/242 (4%)
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAA--SDGEGIDKIV 245
+ YN+++ + + +K +LM M G D +S ++ + SD + KI
Sbjct: 256 LTYNALIGACARNDDLEKALNLMSRMRRDGYPSDFVNYSFIIQSLTRTNKSDSSMLQKIY 315
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF---VIT 302
A +E+D+ + LD + G+ K+G ++A++ L ++ N S VIT
Sbjct: 316 AEIESDK-IELDGQLLNDIIVGFAKSGDVNRAMSFL----AMVQGNGLSPKTATLVAVIT 370
Query: 303 QYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
G ++ +++ K+ L R Y ++ +K ++ AE I E E
Sbjct: 371 ALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSP 430
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
D + LIDAY G A ++ + + G PN + + Y + +K + +
Sbjct: 431 DEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVL 490
Query: 422 KK 423
++
Sbjct: 491 RE 492
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 124/320 (38%), Gaps = 55/320 (17%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQT--GNYKKLDSL 209
P Y AL+ A A EKA +M +MR G ++Y+ ++ +T + L +
Sbjct: 255 PLTYNALIGACARNDDLEKALNLMSRMRRDGYPSDFVNYSFIIQSLTRTNKSDSSMLQKI 314
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASD------------GEGIDK--------IVAMME 249
E+E I+ D + ++ A + D G G+ I A+
Sbjct: 315 YAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGN 374
Query: 250 ADR--------------GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS- 294
A R G++ Y GYVK G A +++ + M + FS
Sbjct: 375 AGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSE----MERSGFSP 430
Query: 295 --RAYDFVITQYAACGNKDDVLRVWKR-----YKQNLKVYNRGYICVISSLLKFDGMESA 347
Y +I YA G + V K + N V++R +++S + +
Sbjct: 431 DEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSR----ILASYRDRGKWQKS 486
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
++ E + + D N +ID + + L A + ++ G +P+ TW +
Sbjct: 487 FQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDC 546
Query: 408 YLQ---NNQSEKGVEAMKKA 424
+ + +N++E+ EAM+++
Sbjct: 547 HCKSGHHNKAEELFEAMQES 566
>gi|449450908|ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
gi|449517541|ref|XP_004165804.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
Length = 527
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/348 (20%), Positives = 155/348 (44%), Gaps = 2/348 (0%)
Query: 74 WVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQ 133
W+ +G P+ + I + R +R AL++ W+ ++ + + D + L+ K
Sbjct: 80 WMGDGFPIHRGDIFHAINRLRKLERNKRALEVMEWVIREKPYRINELDYSYLLEFTIKHH 139
Query: 134 GIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
GI Q F+ +P + + ++ L+ A + + M++MR+ G + +N +
Sbjct: 140 GISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMREVGHSISHLVFNRL 199
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
+ ++ K + ++ +M+ + T++IL+ A + EG+ ++ + M +
Sbjct: 200 IILHSSFRRRKIIPKILSQMKADKVPLHVSTYNILMKIEANEHNIEGLMRVFSDMRRAK- 258
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDV 313
V + Y A+ + A L A + E + N +S YD +I Y + ++
Sbjct: 259 VEPNEVSYCIVATAHAVAKLYTVVEAYVEALEKSIAGNNWS-TYDVLIILYGYLNKEKEL 317
Query: 314 LRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAY 373
R W + + ++ +I I + + + AE+++ E +++ N ++ Y
Sbjct: 318 ERTWGIIQGFPHIPSKSFILAIEAFGRIGLLSRAEELWLEMKTKRGIKATDQFNSILSVY 377
Query: 374 CRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
CR GL+ KA + K + G +PN T+ +A G L+ E+ ++ +
Sbjct: 378 CRHGLIKKATEIFRKIEANGCKPNAITFRHLAFGCLKAGLVEEALKTL 425
>gi|302798623|ref|XP_002981071.1| hypothetical protein SELMODRAFT_444771 [Selaginella moellendorffii]
gi|300151125|gb|EFJ17772.1| hypothetical protein SELMODRAFT_444771 [Selaginella moellendorffii]
Length = 470
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 160/396 (40%), Gaps = 38/396 (9%)
Query: 71 LDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIA 130
+ QW G L L +++++ R + + ++QI W+ +K +T D + L
Sbjct: 61 IKQWERSGNKLTRSMLAMLLQRMRCRRMHTKSVQILSWLVEKKPIEVTEGDYEQLVTLAC 120
Query: 131 KVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
+ E A YF +P L + AL+ YA KAE +M+ G Y
Sbjct: 121 RDSDYETAEKYFYSLPSHLSKWPAFSALVAGYASRNLMAKAENLMRT----GTSPLPQPY 176
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA 250
++M+ +Y + Y+K+ + M+ GI+ + T+++LL +G+++ V
Sbjct: 177 SAMILMYIRRAEYQKIVKIYKSMKADGIEPNVITYAVLLKFKDRIGPIKGLEQDV----- 231
Query: 251 DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK 310
A G +K LS+ A MMH YA G
Sbjct: 232 ------------EDALGKIK--LSEMCAAKRPAIAGNMMHC------------YAMLGKL 265
Query: 311 DDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
D V VW++ Q ++ ++ I SL + AEK+ + + N+ R+ L
Sbjct: 266 DKVEEVWQQMDQERRLPEGFFVMAIESLALLGQVTKAEKVAQMKPTANV--QARLLQALA 323
Query: 371 DAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA 430
+ ++G + + E ++ +A P+ + + TGYL + M+ AL ++
Sbjct: 324 RHFAKQGNMKRVEEMLGRADRYELTPSFGIYNYLVTGYLARKDPQTAASRMRLALKVV-T 382
Query: 431 GTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTG 466
R PS + L Y E+D+ A+ ++ G
Sbjct: 383 EERAVPSYAAVTGLLPYLAAEKDVTTAEQMVRRYRG 418
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 160/361 (44%), Gaps = 22/361 (6%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV--AI 124
M LLD V G D I+I + ++ A+ + +K L P V
Sbjct: 360 MHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLV---FSKMRQHGLNPNVVCYGT 416
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+D++ K ++ A YF + ++ P+ VY +L++ +KAE ++ +M DRG
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ TI +NS+++ + + G + + L M G+ D T++ L+ C A +
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK------SEVLMMHNKFSRA 296
K++A M GV D Y T +GY + D ALA+ ++ S ++ +N +
Sbjct: 537 KLLASM-VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 595
Query: 297 YDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
F + AA K+ + + K Q L YN ++ L K + + A ++F+
Sbjct: 596 L-FHTRRTAAA--KELYVSITKSGTQLELSTYN----IILHGLCKNNLTDEALRMFQNLC 648
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+L + R N +I A + G + +A+ L G P+VRT+ LMA ++ E
Sbjct: 649 LTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLE 708
Query: 416 K 416
+
Sbjct: 709 E 709
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 125/288 (43%), Gaps = 17/288 (5%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K Q +++A N + + +P Y ++L+ Y + ++A +++MR G+
Sbjct: 246 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPN 305
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ Y+S+MN + G + + M ++G++ D T+ LL A + ++
Sbjct: 306 VVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLD 365
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH--NKFSRAYDFVITQY 304
+M G+ D V+ Y K D+A+ V K + H N Y VI
Sbjct: 366 LM-VRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSK---MRQHGLNPNVVCYGTVIDVL 421
Query: 305 AACGNKDDVLRVWKR-----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
G+ DD + +++ N+ VY +I L D + AE++ E R +
Sbjct: 422 CKSGSVDDAMLYFEQMIDEGLTPNIIVYTS----LIHGLCTCDKWDKAEELILEMLDRGI 477
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
C + N +ID++C+ G + ++E L G +P++ T+ + G
Sbjct: 478 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 525
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 115/285 (40%), Gaps = 43/285 (15%)
Query: 142 FNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG--LVKKTIDYNSMMNVYYQ 199
C+P+ ++ L + +S E E++ DRG + YN+++N +++
Sbjct: 157 LGCIPDVFSYNNLLKGLCDE---NRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213
Query: 200 TGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDW 258
G+ K S HEM ++GI D T+S +++A C A + + ++ + M++ GV+ D
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK--NGVMPDC 271
Query: 259 TVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK 318
Y + GY +G +A+ L+K S + + Y++ N
Sbjct: 272 MTYNSILHGYCSSGQPKEAIGTLKKMR--------SDGVEPNVVTYSSLMN--------- 314
Query: 319 RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
Y+C K A KIF+ R L DI L+ Y +G
Sbjct: 315 ------------YLC------KNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
L + L+ G +P+ + ++ Y + + ++ + K
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSK 401
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 87/216 (40%), Gaps = 25/216 (11%)
Query: 215 EKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+KG D TF+ LL CA + +D ++ M + G + D Y G
Sbjct: 120 KKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM-TELGCIPDVFSYNNLLKGLCDENR 178
Query: 274 SDKALAVLRKSEVLMMHNKFSRA------YDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
S +AL +L +M ++ + Y+ V+ + G+ D K Y ++
Sbjct: 179 SQEALELLH----MMADDRGGGSPPDVVSYNTVLNGFFKEGDSD------KAYSTYHEML 228
Query: 328 NRG-------YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
+RG Y +I++L K M+ A ++ + D N ++ YC G
Sbjct: 229 DRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 288
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+A + K + G EPNV T+ + +N +S +
Sbjct: 289 EAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 55/294 (18%), Positives = 124/294 (42%), Gaps = 28/294 (9%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ L+ AYA + ++A ++ +MR GL + Y ++++V ++G+ +M
Sbjct: 378 VFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM 437
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG- 272
++G+ + ++ L+ + ++++ M DRG+ L+ + + + K G
Sbjct: 438 IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM-LDRGICLNTIFFNSIIDSHCKEGR 496
Query: 273 ------LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLK 325
L D + + K +++ Y+ +I G D+ ++ +K
Sbjct: 497 VIESEKLFDLMVRIGVKPDII--------TYNTLIDGCCLAGKMDEATKLLASMVSVGVK 548
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK---- 381
Y +I+ + M+ A +F+E S + +I N ++ +GL H
Sbjct: 549 PDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL-----QGLFHTRRTA 603
Query: 382 -AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK-ALVLLEAGTR 433
A+ L GT+ + T+ ++ G +NN +++ + + L L+ TR
Sbjct: 604 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 657
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 109/244 (44%), Gaps = 3/244 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +LLNAY + EKA + +MR + YN++++ Y G K+ SL+HEME
Sbjct: 403 YTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEME 462
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ GI D + S LL+AC ID I+A ++ RG+ L+ Y + Y+ G
Sbjct: 463 QDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKS-RGIQLNTVAYNSGIGSYLSLGDY 521
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK-RYKQNLKVYNRGYIC 333
KAL VL S + Y+ +I+ G + L+ ++ N+ + Y
Sbjct: 522 KKAL-VLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSS 580
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
VI S +K + A F + D+ LI AY G +A L + + G
Sbjct: 581 VICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNG 640
Query: 394 TEPN 397
T+P+
Sbjct: 641 TQPD 644
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 163/387 (42%), Gaps = 51/387 (13%)
Query: 55 RMLS-PMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKS 113
R+L+ P D D++ +L+ W GR ++I++ + HA+ + WM +
Sbjct: 92 RLLALPHADA-DAVDAVLNCWA--GR-FARRNFPLLIREIAISGSLKHAVHVFRWMKNQE 147
Query: 114 NFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKA 171
N+ + + L A+ ++QA F + E P+ Y +L++A+A A A
Sbjct: 148 NYCARNDIYGMMIRLHARHNKVDQARGLFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWA 207
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
IM M+ + YN+++N GN+KK L +M E G+ D T +I+LSA
Sbjct: 208 INIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSA 267
Query: 232 -------------------CAAASD-----------------GEGIDKIVAMMEADRGVV 255
A D GE I+ +M E
Sbjct: 268 FKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCH 327
Query: 256 LDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR--AYDFVITQYAACGNKDDV 313
D Y + Y G ++ AV ++++ +Y+ ++ YA+ G +
Sbjct: 328 PDVVTYTSIMYSYSVCGQAENCKAVF---DIMVAEGVRPNIVSYNALLGAYASHGMHTEA 384
Query: 314 LRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP-NHLID 371
L +K KQN L+ Y ++++ + E A ++F E +N C ++ N LID
Sbjct: 385 LETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMR-KNACKPNKVSYNALID 443
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNV 398
AY G+L +A +L+++ + G +P+V
Sbjct: 444 AYGSAGMLKEAISLLHEMEQDGIQPDV 470
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 133 QG-IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
QG + +AAS FN + E P V Y L+ AY+ S +A + ++M + G I
Sbjct: 588 QGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIV 647
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
+S+M + G +++ L+ M++K I ++ + ++S+C D + +I+ ++
Sbjct: 648 CSSLMEALNKGGQPERVLQLIEFMKQKKIQLNQKAYFEIISSCTMLRDWKTASQIIEHLD 707
Query: 250 A 250
+
Sbjct: 708 S 708
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 128/303 (42%), Gaps = 38/303 (12%)
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRD 180
+I +D + K +E A + EK P + Y A+++ Y ++A + +RD
Sbjct: 277 SILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRD 336
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
+G+ Y+ ++N Y + N K L E+ +KG+ D T+S +L
Sbjct: 337 KGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGD 396
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
KI M G D +++T GY K GL ++A+ + K E
Sbjct: 397 AKKIFDEM-LRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLE--------------- 440
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
N++D N+ Y VI+ L K D + A IFE+ S L
Sbjct: 441 -------RNRED---------TNISFYT----VVINGLCKNDRVREAHAIFEKLPSIGLI 480
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
D+R N +I +CR GL + + ++ K + G N T+ ++ G+ ++N+ + V
Sbjct: 481 PDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSF 540
Query: 421 MKK 423
MK+
Sbjct: 541 MKE 543
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 113/244 (46%), Gaps = 9/244 (3%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
++ +M+ + + YNS+++ + G ++K+ +L+ EM I+ + +TFSIL+
Sbjct: 225 LLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLC 284
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA---LAVLRKSEVLMMH 290
E D+++ M ++GV D Y+ GY G D+A VLR +
Sbjct: 285 KEGKVEDADEVMRHM-IEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGI--KP 341
Query: 291 NKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEK 349
N FS Y +I Y N ++++ Q LK Y ++ L++ + A+K
Sbjct: 342 NIFS--YSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKK 399
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
IF+E DI + + L+ Y + GL+ +A L K + + N+ + ++ G
Sbjct: 400 IFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLC 459
Query: 410 QNNQ 413
+N++
Sbjct: 460 KNDR 463
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 118/296 (39%), Gaps = 16/296 (5%)
Query: 131 KVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
+V ++ A S F+ + LPSV + L K + ++MR G+
Sbjct: 39 EVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDS 98
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMM 248
N + N Y S++ + GI + TF+ LL A + + D +V
Sbjct: 99 ILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFA--ENKVTDAVVLFK 156
Query: 249 EADRGVVLDW--TVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
+ R + + +Y T +G K G ++K L++LR E R Y VI
Sbjct: 157 KLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDV-RTYSIVIDALCK 215
Query: 307 CGNKDDVLRVWKRYKQ-----NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
N D + + KQ N+ YN +I L K E + + E + N+
Sbjct: 216 DINLDAAINLLNEMKQKNIPPNIFTYNS----LIDGLCKLGQWEKVKTLLSEMVNLNINP 271
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
++ + LID C+ G + A+ ++ +G EP++ T+ + GY Q ++
Sbjct: 272 NVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRA 327
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+ +A + F +P +P V Y ++ + ++ + I+++M D G I YN
Sbjct: 464 VREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNV 523
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
+M ++++ ++ S M EM +G D T +L++
Sbjct: 524 IMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINV 562
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 160/361 (44%), Gaps = 22/361 (6%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV--AI 124
M LLD V G D I+I + ++ A+ + +K L P V
Sbjct: 360 MHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLV---FSKMRQHGLNPNVVCYGT 416
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+D++ K ++ A YF + ++ P+ VY +L++ +KAE ++ +M DRG
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ TI +NS+++ + + G + + L M G+ D T++ L+ C A +
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK------SEVLMMHNKFSRA 296
K++A M GV D Y T +GY + D ALA+ ++ S ++ +N +
Sbjct: 537 KLLASM-VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 595
Query: 297 YDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
F + AA K+ + + K Q L YN ++ L K + + A ++F+
Sbjct: 596 L-FHTRRTAAA--KELYVSITKSGTQLELSTYN----IILHGLCKNNLTDEALRMFQNLC 648
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+L + R N +I A + G + +A+ L G P+VRT+ LMA ++ E
Sbjct: 649 LTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLE 708
Query: 416 K 416
+
Sbjct: 709 E 709
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 124/284 (43%), Gaps = 9/284 (3%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K Q +++A N + + +P Y ++L+ Y + ++A +++MR G+
Sbjct: 246 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPN 305
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ Y+S+MN + G + + M ++G++ D T+ LL A + ++
Sbjct: 306 VVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLD 365
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH--NKFSRAYDFVITQY 304
+M G+ D V+ Y K D+A+ V K + H N Y VI
Sbjct: 366 LM-VRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSK---MRQHGLNPNVVCYGTVIDVL 421
Query: 305 AACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
G+ DD + +++ + L Y +I L D + AE++ E R +C +
Sbjct: 422 CKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNT 481
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
N +ID++C+ G + ++E L G +P++ T+ + G
Sbjct: 482 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 525
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 115/285 (40%), Gaps = 43/285 (15%)
Query: 142 FNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG--LVKKTIDYNSMMNVYYQ 199
C+P+ ++ L + +S E E++ DRG + YN+++N +++
Sbjct: 157 LGCIPDVFSYNNLLKGLCDE---NRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213
Query: 200 TGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDW 258
G+ K S HEM ++GI D T+S +++A C A + + ++ + M++ GV+ D
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK--NGVMPDC 271
Query: 259 TVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK 318
Y + GY +G +A+ L+K S + + Y++ N
Sbjct: 272 MTYNSILHGYCSSGQPKEAIGTLKKMR--------SDGVEPNVVTYSSLMN--------- 314
Query: 319 RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
Y+C K A KIF+ R L DI L+ Y +G
Sbjct: 315 ------------YLC------KNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
L + L+ G +P+ + ++ Y + + ++ + K
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSK 401
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 87/216 (40%), Gaps = 25/216 (11%)
Query: 215 EKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+KG D TF+ LL CA + +D ++ M + G + D Y G
Sbjct: 120 KKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM-TELGCIPDVFSYNNLLKGLCDENR 178
Query: 274 SDKALAVLRKSEVLMMHNKFSRA------YDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
S +AL +L +M ++ + Y+ V+ + G+ D K Y ++
Sbjct: 179 SQEALELLH----MMADDRGGGSPPDVVSYNTVLNGFFKEGDSD------KAYSTYHEML 228
Query: 328 NRG-------YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
+RG Y +I++L K M+ A ++ + D N ++ YC G
Sbjct: 229 DRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 288
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+A + K + G EPNV T+ + +N +S +
Sbjct: 289 EAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 55/294 (18%), Positives = 124/294 (42%), Gaps = 28/294 (9%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ L+ AYA + ++A ++ +MR GL + Y ++++V ++G+ +M
Sbjct: 378 VFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM 437
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG- 272
++G+ + ++ L+ + ++++ M DRG+ L+ + + + K G
Sbjct: 438 IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM-LDRGICLNTIFFNSIIDSHCKEGR 496
Query: 273 ------LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLK 325
L D + + K +++ Y+ +I G D+ ++ +K
Sbjct: 497 VIESEKLFDLMVRIGVKPDII--------TYNTLIDGCCLAGKMDEATKLLASMVSVGVK 548
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK---- 381
Y +I+ + M+ A +F+E S + +I N ++ +GL H
Sbjct: 549 PDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL-----QGLFHTRRTA 603
Query: 382 -AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK-ALVLLEAGTR 433
A+ L GT+ + T+ ++ G +NN +++ + + L L+ TR
Sbjct: 604 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 657
>gi|387219093|gb|AFJ69255.1| hypothetical protein NGATSA_2006000, partial [Nannochloropsis
gaditana CCMP526]
Length = 479
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 131/294 (44%), Gaps = 20/294 (6%)
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
L I YNS++ Y G+ ++ M + G+ D YTF+ L++A A + +
Sbjct: 26 LKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAAE 85
Query: 243 KIVAMMEADRGVVLDWTVYATAASGY-VKAGLSDKALAVL-RKSEVLMMHNKFSRAYDFV 300
K+VA M+ + GV+ D Y+ GY K G KA VL R + + N ++ Y+++
Sbjct: 86 KMVAYMQ-EHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYT--YNYL 142
Query: 301 ITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
I Y G D V +R + L + Y ++ + + AEKI + + +
Sbjct: 143 IEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGV 202
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYK----AQLRGT-----EPNVRTWYLMATGYLQ 410
++++ L++AY +RG + AE ++ + A+ G EPNV T+ L
Sbjct: 203 QANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYST-----LM 257
Query: 411 NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
N + G+ A + ++ W P+ + Y + D EGA+ +K +
Sbjct: 258 NVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRM 311
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 105/275 (38%), Gaps = 28/275 (10%)
Query: 154 VYIALLNAYACAKS-AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
Y LL YA + KAE ++++M G+ + YN ++ Y + G + ++
Sbjct: 102 TYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLER 161
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M G+ + +L+ A D G +KI+ M+ + GV + V+ T + Y K G
Sbjct: 162 MRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKE-GVQANVQVFTTLMNAYAKRG 220
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYI 332
+ A VL A + + G+KD V Y + VY R +
Sbjct: 221 DVEGAEGVL--------------ARMLAVAEEEGGGSKDCEPNVHT-YSTLMNVYARAGL 265
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
AE + + ++ L+ AY R G AE ++ + +
Sbjct: 266 AA-----------GAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAA 314
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVL 427
G PNV T+ + + + E VE + VL
Sbjct: 315 GVSPNVLTYNTLLSATSRMGLREGEVEERRAKRVL 349
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 31/234 (13%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQM----RDRGLVKKTID-----YNSMMNVYYQTGNYK 204
V+ L+NAYA E AE ++ +M + G K + Y+++MNVY + G
Sbjct: 208 VFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAA 267
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
+ ++ M G + TF+ L++A + A D EG + ++ MEA GV + Y T
Sbjct: 268 GAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAA-GVSPNVLTYNTL 326
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA---------------YDFVIT---QYAA 306
S + GL + + R VL +++ R+ Y ++T ++
Sbjct: 327 LSATSRMGLREGEVEERRAKRVLQVYDTMRRSAGKGGGLEKAPDEATYTVLLTCLLRFPK 386
Query: 307 CGNKDD---VLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
K+ +L W+R +R Y I+ L E +F E ++R
Sbjct: 387 RLTKEVYKLILEDWRRLVPTRNRSDRNYQSFITVLAAMGDWEEMATVFREAQAR 440
>gi|422294671|gb|EKU21971.1| hypothetical protein NGA_2006000, partial [Nannochloropsis gaditana
CCMP526]
Length = 472
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 131/294 (44%), Gaps = 20/294 (6%)
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
L I YNS++ Y G+ ++ M + G+ D YTF+ L++A A + +
Sbjct: 19 LKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAAE 78
Query: 243 KIVAMMEADRGVVLDWTVYATAASGY-VKAGLSDKALAVL-RKSEVLMMHNKFSRAYDFV 300
K+VA M+ + GV+ D Y+ GY K G KA VL R + + N ++ Y+++
Sbjct: 79 KMVAYMQ-EHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYT--YNYL 135
Query: 301 ITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
I Y G D V +R + L + Y ++ + + AEKI + + +
Sbjct: 136 IEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGV 195
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYK----AQLRGT-----EPNVRTWYLMATGYLQ 410
++++ L++AY +RG + AE ++ + A+ G EPNV T+ L
Sbjct: 196 QANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTY-----STLM 250
Query: 411 NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
N + G+ A + ++ W P+ + Y + D EGA+ +K +
Sbjct: 251 NVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRM 304
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 105/275 (38%), Gaps = 28/275 (10%)
Query: 154 VYIALLNAYACAKS-AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
Y LL YA + KAE ++++M G+ + YN ++ Y + G + ++
Sbjct: 95 TYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLER 154
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M G+ + +L+ A D G +KI+ M+ + GV + V+ T + Y K G
Sbjct: 155 MRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKE-GVQANVQVFTTLMNAYAKRG 213
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYI 332
+ A VL A + + G+KD V Y + VY R +
Sbjct: 214 DVEGAEGVL--------------ARMLAVAEEEGGGSKDCEPNVHT-YSTLMNVYARAGL 258
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
AE + + ++ L+ AY R G AE ++ + +
Sbjct: 259 AA-----------GAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAA 307
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVL 427
G PNV T+ + + + E VE + VL
Sbjct: 308 GVSPNVLTYNTLLSATSRMGLREGEVEERRAKRVL 342
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 31/234 (13%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQM----RDRGLVKKTID-----YNSMMNVYYQTGNYK 204
V+ L+NAYA E AE ++ +M + G K + Y+++MNVY + G
Sbjct: 201 VFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAA 260
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
+ ++ M G + TF+ L++A + A D EG + ++ MEA GV + Y T
Sbjct: 261 GAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAA-GVSPNVLTYNTL 319
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA---------------YDFVIT---QYAA 306
S + GL + + R VL +++ R+ Y ++T ++
Sbjct: 320 LSATSRMGLREGEVEERRAKRVLQVYDTMRRSAGKGGGLEKAPDEATYTVLLTCLLRFPK 379
Query: 307 CGNKDD---VLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
K+ +L W+R +R Y I+ L E +F E ++R
Sbjct: 380 RLTKEVYKLILEDWRRLVPTRNRSDRNYQSFITVLAAMGDWEEMATVFREAQAR 433
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 140/319 (43%), Gaps = 22/319 (6%)
Query: 137 QAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
+A + FN + + P + Y +LLNAY + EKA + +M+ + YN+++
Sbjct: 241 EALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALI 300
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--DR 252
+ Y G K+ L+HEME+ GI D + S LL+AC I +I ++EA R
Sbjct: 301 DAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQ---ITRIETILEAARSR 357
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAV---LRKSEVLMMHNKFSRAYDFVITQYAACGN 309
G+ L+ Y + Y+ G +KAL + +R+S V + Y+ +I+ + G
Sbjct: 358 GIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNV----KPDAVTYNILISGSSKLGK 413
Query: 310 KDDVLRVWK-RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
+ LR ++ + Y +I S +K + AE F + D+
Sbjct: 414 YTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTT 473
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV---EAMKKAL 425
LI AY G +A L + ++ G P+ + + + + E+ + E MKK
Sbjct: 474 LIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKS 533
Query: 426 VLLEAGTRWKPSKECLAAC 444
+ L + + E +A+C
Sbjct: 534 IPLNQKSYF----EIIASC 548
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 135/337 (40%), Gaps = 56/337 (16%)
Query: 109 MTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYF------NCVPEKLKLPSVYIALLNAY 162
M + N+ + + L A+ ++QA F C P+ +Y +L++A+
Sbjct: 1 MKNQDNYCARNDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPD----ADIYNSLIHAH 56
Query: 163 ACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDK 222
+ A A IM+ M + YN+++N GN+KK L +M E G+ D
Sbjct: 57 SRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDL 116
Query: 223 YTFSILLSA-------------------CAAASD-----------------GEGIDKIVA 246
T +I+LSA SD GE I+ +
Sbjct: 117 VTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNS 176
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQ 303
M E D Y + Y G + A+ LM+ AY+ ++
Sbjct: 177 MRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFD----LMVAEGVKPNIVAYNSLLGA 232
Query: 304 YAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
YA+ G + L ++ K+N L+ Y ++++ + E A ++F + + +N C
Sbjct: 233 YASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMK-KNSCKP 291
Query: 363 IRIP-NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
++ N LIDAY G+L +A L+++ + G +P+V
Sbjct: 292 NKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDV 328
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 128/281 (45%), Gaps = 18/281 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY L++AYA + E+A +++M++ G+ + Y+ +++ + +TGN + D E
Sbjct: 348 VYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEA 407
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+EK + + ++ A + + + +V ME + G+ +Y T GY G
Sbjct: 408 KEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREME-EEGIDAPIDIYHTMMDGYTMVGD 466
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-----KQNLKVYN 328
DK L V + + + N Y +I YA G L V K K N+K Y+
Sbjct: 467 EDKCLLVFERFKECGL-NPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYS 525
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+I+ LK +A IFE+ + D+ + N++I A+C G + +A + +
Sbjct: 526 ----MLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKE 581
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE 429
Q + +P RT+ + G+ + + MKKAL + +
Sbjct: 582 MQKQRHKPTTRTFMPIIHGFARKGE-------MKKALDVFD 615
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 81/151 (53%), Gaps = 7/151 (4%)
Query: 137 QAASYFNCV-PEKLKLPS-VYIALLNAYACAKSA--EKAEIIMQQMRDRGLVKKTIDYNS 192
+A +YF + E L+L Y ALL A C KS + A + ++M + + + T YN
Sbjct: 679 KAFTYFTKLRDEGLQLDVYTYEALLKA--CCKSGRMQSALAVTKEMSAQNIPRNTFIYNI 736
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+++ + + G+ + LM +M+ +G+ D +T++ ++AC+ A D + K + M++
Sbjct: 737 LIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKS-V 795
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
GV + Y T +G+ +A L +KAL+ +
Sbjct: 796 GVKPNVKTYTTLINGWARASLPEKALSCFEE 826
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 106/249 (42%), Gaps = 3/249 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y +++ Y +K ++ ++ ++ GL I Y ++N+Y + G K + EM
Sbjct: 453 IYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEM 512
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E GI + T+S+L++ D I + D G+ D +Y + + G
Sbjct: 513 EHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKD-GIKPDVVLYNNIITAFCGMGK 571
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYI 332
D+A+ +++ + H +R + +I +A G L V+ + + + Y
Sbjct: 572 MDRAVCTVKEMQ-KQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYN 630
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I L++ ME AE+I +E + + ++ Y G KA T K +
Sbjct: 631 ALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDE 690
Query: 393 GTEPNVRTW 401
G + +V T+
Sbjct: 691 GLQLDVYTY 699
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 117/279 (41%), Gaps = 10/279 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+N + K A I + + G+ + YN+++ + G + + EM
Sbjct: 523 TYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEM 582
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+++ TF ++ A + + + MM G + Y G V+
Sbjct: 583 QKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMS-GCIPTVHTYNALILGLVEKRK 641
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ---NLKVYNRG 330
+KA +L + L + Y ++ YA+ G+ + + + L VY
Sbjct: 642 MEKAEQILDEM-TLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYT-- 698
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y ++ + K M+SA + +E ++N+ + I N LID + RRG + +A L+ + +
Sbjct: 699 YEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMK 758
Query: 391 LRGTEPNVRTW--YLMATGYLQNNQ-SEKGVEAMKKALV 426
G +P++ T+ ++ A + Q + K +E MK V
Sbjct: 759 REGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGV 797
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/272 (18%), Positives = 111/272 (40%), Gaps = 40/272 (14%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++ +++ +A +KA + MR G + YN+++ + +K + ++ EM
Sbjct: 593 TFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEM 652
Query: 214 EEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
G+ +++T++ ++ A+ D G+ + D G+ LD Y K+G
Sbjct: 653 TLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLR--DEGLQLDVYTYEALLKACCKSG 710
Query: 273 LSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
ALAV ++ S + N F Y+ +I +A G+ +W+
Sbjct: 711 RMQSALAVTKEMSAQNIPRNTF--IYNILIDGWARRGD------IWE------------- 749
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
A + ++ + + DI I+A + G + +A I + +
Sbjct: 750 ---------------AADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKS 794
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G +PNV+T+ + G+ + + EK + ++
Sbjct: 795 VGVKPNVKTYTTLINGWARASLPEKALSCFEE 826
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 130/274 (47%), Gaps = 11/274 (4%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
ALL + E+ + ++M +RGLV I YN+++ ++G ++ L +M ++
Sbjct: 492 ALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQ 551
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA-DRGVVLDWTVYATAASGYVKAGLSD 275
G D YT++ L+ A + + ++ + EA D GVV + YA GY A D
Sbjct: 552 GFKPDTYTYNFLMKGLADKGKMDDVGRV--LHEAKDHGVVPNIYTYALMLEGYCNADRID 609
Query: 276 KALAVLRKSEVLMMHNKFSRAY---DFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGY 331
A+++ K +++NK +Y + +I ++ GN + ++ + N+ Y
Sbjct: 610 NAVSLFNK----LVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTY 665
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I + D +E A+ IFEE + L ++ LI YC+ G + + E+++ +
Sbjct: 666 SSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTS 725
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
+PN T+ +M GY + +++ + + + +
Sbjct: 726 NCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMI 759
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAV-LRKSEVLMMHNKFSRAYDFVITQYAACGNKD 311
GV++D YATA + Y K G D+A+ + L+ E ++ N + Y+ +I G +
Sbjct: 236 GVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVT--YNNLIDGLCKSGRLE 293
Query: 312 DVLRVWKRYKQNLKVYNR--GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
+ L R +N KV Y +++ L+KF+ + A + E S+ + + N L
Sbjct: 294 EALMFKGRMVEN-KVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNAL 352
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
ID Y R+G + A + L+G +PN T + G+ + NQ E+ + ++ L
Sbjct: 353 IDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLL 408
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P++ Y ++++ C E+A+ I ++MR+ GL+ Y +++ Y + G +++S+
Sbjct: 660 PTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESI 719
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+ EM I +K T++I++ + + K++ M A+ G+ D Y GY
Sbjct: 720 LQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIAN-GISPDTVTYTVLQKGYC 778
Query: 270 K 270
K
Sbjct: 779 K 779
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 139/292 (47%), Gaps = 7/292 (2%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ + IE+A F + EK VY+ ++++ + + ++A ++ +M D+GL+
Sbjct: 309 FSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPS 368
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIV 245
Y ++++ + G + L++EM+ KGID + F+ L+ C + E + ++
Sbjct: 369 AHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEAL-RLQ 427
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
+ME +G+ D Y + ASG K D+A +L S V + + ++ +I Y
Sbjct: 428 VVMEK-KGLESDVFAYNSIASGLCKLNRKDEAKGLLF-SMVERGVSPNTMSFTTLIDIYC 485
Query: 306 ACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
GN + RV++ ++ V N Y +I K M+ A K+ +E E+R L D+
Sbjct: 486 KEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVY 545
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
LI C G + A L + RG PNV T+ M +G ++ +SE+
Sbjct: 546 TCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEE 597
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 35/186 (18%)
Query: 121 DVAIRLDLIAKVQGIEQAASYFNCVPEKL-KL-------------------PSV--YIAL 158
D A+RL ++ + +G+E +N + L KL P+ + L
Sbjct: 421 DEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTL 480
Query: 159 LNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGI 218
++ Y + +A+ + ++M ++G V I YN +++ Y + GN K+ L E+E +G+
Sbjct: 481 IDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGL 540
Query: 219 DCDKYTFSILLSACAAASDGEGIDKIVAMM------EADRGVVLDWTVYATAASGYVKAG 272
D YT C + GE ID V M RG+V + Y SG K G
Sbjct: 541 IPDVYT-------CTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDG 593
Query: 273 LSDKAL 278
S++A
Sbjct: 594 RSEEAF 599
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 117/300 (39%), Gaps = 32/300 (10%)
Query: 127 DLIAKVQGIEQAASYFNC--VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
D + K Q + FNC V + L++P IA L AC +S +R
Sbjct: 108 DKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACNESK----------CNRAKF 157
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI 244
K+ ++ + VY + + ME+KG D+ + + L A G +D
Sbjct: 158 KEKF-FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYL---LALRRGGQVDSC 213
Query: 245 VAMMEADRGVVLDWTVYA--TAASGYVKAG-------LSDKALAVLRKSEVLMMHNKFSR 295
+ + ++ TVY+ G K G L D+ A K+ V+ +N F
Sbjct: 214 LRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVT-YNAFIE 272
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
Y + G ++L + + K+ + Y +I +E A+++FEE
Sbjct: 273 GY----FKRLDLGGVAEILTLME--KEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMR 326
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+ + D+ + +I CR G + +A L + +G P+ T+ + G + Q E
Sbjct: 327 EKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQME 386
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 138/352 (39%), Gaps = 29/352 (8%)
Query: 93 FRLYK-RFSHALQISMWMTK-KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLK 150
F+LY+ R S L S + + F D +R+ + ++ A + C K K
Sbjct: 99 FKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACNESKCNRAKFK 158
Query: 151 LPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS-- 208
+ L YA K +A + M +G ID S + ++DS
Sbjct: 159 -EKFFDLLFRVYADNKMFGEALEAFEHMEKKGF---HIDERSCLVYLLALRRGGQVDSCL 214
Query: 209 -LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
M ++ Y+ +I+L D E K++ + A +GV + Y G
Sbjct: 215 RFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAA-KGVKANVVTYNAFIEG 273
Query: 268 YVKAGLSDKALAVLRKSEVLMMHNKFSRA-----YDFVITQYAACGNKDDVLRVWKRYKQ 322
Y K L + +E+L + K A Y +I ++ G ++ R+++ ++
Sbjct: 274 YFKR------LDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMRE 327
Query: 323 ---NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
VY Y +IS + ++ A +F+E + L LI C+ G +
Sbjct: 328 KGIEADVYV--YTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQM 385
Query: 380 HKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAG 431
A+ L+ + Q +G + N + + GY ++ + EA++ +V+ + G
Sbjct: 386 EAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVD---EALRLQVVMEKKG 434
>gi|357139769|ref|XP_003571450.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Brachypodium distachyon]
Length = 517
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 153/348 (43%), Gaps = 2/348 (0%)
Query: 74 WVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQ 133
W+ GR + + I + R + LQ+ W+ ++ + L+ D + L+ AKV
Sbjct: 71 WMAAGRAVHRGHVFHAINRLRRRRLHRTGLQVMEWVIRERPYKLSELDYSYLLEFTAKVH 130
Query: 134 GIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
GI +A S F +P++ + +Y L+ A + + M++MR+ L YN +
Sbjct: 131 GISEAESLFLRIPQEYRNELLYNNLVMACLELSLIKLSYGYMRKMRELSLPISPYVYNRL 190
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
+ ++ G K + ++ +M+ + T++ILL A + +G+ ++ M+ +
Sbjct: 191 IILHSSEGRRKTIPKILAQMKASKVTPHTSTYNILLKIQANEHNIDGVARVFNDMKRAK- 249
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDV 313
V + Y A + A L + + + M +S + ++ Y G + ++
Sbjct: 250 VEPNEITYGILAISHAVARLYTVSQTYIEAIKNSMTGTNWS-TQEILLILYGYLGKEKEL 308
Query: 314 LRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAY 373
WK + + ++ + I + K +E AE+I+ E +S N ++ Y
Sbjct: 309 KMTWKLMQVLPHIRSKSFTLAIEAFGKIGSIEQAEEIWGEIKSARKLRLTEQFNSMLSVY 368
Query: 374 CRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
CR G++ KA + + + G +PN T+ +A G L+ ++ + M
Sbjct: 369 CRHGVVDKASAVFKEMRASGCQPNAITYRHLALGCLKAGLVKQALNTM 416
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 148/343 (43%), Gaps = 15/343 (4%)
Query: 64 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA 123
+D+M + + E G D+ +IK + K+ AL++ + MT + +P V+
Sbjct: 146 DDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVS 205
Query: 124 IR--LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMR 179
+D K +++A F+ + + P V Y +L++ A++ KAE I+Q M
Sbjct: 206 YSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMF 265
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS-ACAAASDG 238
D+G++ T YN M+ Y G ++ L+ +M G+ D T+ +L+ C
Sbjct: 266 DKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCA 325
Query: 239 EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---R 295
E +M+ +G + T+Y GY G AL +R LM+ + R
Sbjct: 326 EARSVFDSMVR--KGQKPNSTIYHILLHGYATKG----ALIDVRDLLDLMIRDGIPFEHR 379
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
A++ +I YA G D + + +QN L+ Y VI L K +E A F +
Sbjct: 380 AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQM 439
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
S L +I LI C G K E L ++ RG P+
Sbjct: 440 VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPD 482
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 146/347 (42%), Gaps = 24/347 (6%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
LLD + +G P + I+I + + A+ M + L P V+ +
Sbjct: 365 LLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNG---LRPDVVSYSTVIH 421
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
++ K+ +E A +FN + + P++ + +L++ +K E + +M +RG+
Sbjct: 422 ILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHP 481
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKI 244
I N++M+ + G + + G+ + +++ L+ C E I +
Sbjct: 482 DAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQF 541
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
M+ G+ D Y +GY K G + ALA+ R E+ KF IT
Sbjct: 542 DRMVSI--GLRPDSWTYNALLNGYFKNGRVEDALALYR--EMFRKDVKFC-----AITSN 592
Query: 305 AACGNKDDVLRVWKRYKQNLKVYNRG-------YICVISSLLKFDGMESAEKIFEEWESR 357
R+ + +K+ +RG Y V+ L + ++ A ++FE+ S+
Sbjct: 593 IILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSK 652
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
D+ N +I+A + G + +A++L LRG P+V T+ LM
Sbjct: 653 EFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLM 699
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I K ++ A +F+E + D+ + LID C+ ++KAE ++
Sbjct: 206 YSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMF 265
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKK 450
+G PN RT+ +M GY Q E+ V +KK +G+ +P + YY K
Sbjct: 266 DKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKM-----SGSGLQPDVVTYILLIQYYCK 320
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 84/210 (40%), Gaps = 12/210 (5%)
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTV--YAT 263
+D + M E G D ++++ L+ + +++ M AD G V Y+T
Sbjct: 149 MDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYST 208
Query: 264 AASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQY--AACGNKDDVLRVWK 318
G+ K G DKA + + M+ F Y +I A NK + + +
Sbjct: 209 IIDGFFKEGEVDKAYFLFDE----MIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAI-LQH 263
Query: 319 RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
+ + + R Y +I +E A ++ ++ L D+ LI YC+ G
Sbjct: 264 MFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGR 323
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+A ++ +G +PN ++++ GY
Sbjct: 324 CAEARSVFDSMVRKGQKPNSTIYHILLHGY 353
>gi|224125058|ref|XP_002319492.1| predicted protein [Populus trichocarpa]
gi|222857868|gb|EEE95415.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Query: 287 LMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMES 346
L+ N+ A + + + YA GNK ++ R W+ +K + YN GY+ + SSL+K D +
Sbjct: 49 LLKGNERRYAKENLFSLYADVGNKYELHRFWRFFKNSASFYNSGYLHITSSLMKSDDFDG 108
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
AE+++EEW S D+++PN + Y ++GL KA + K R E ++ L+AT
Sbjct: 109 AEEVWEEWLSLKTLFDVQVPNAMFTCYSKKGLWEKARGICEK-DCREWELGAYSFDLLAT 167
Query: 407 GYLQNNQSEKGVEAMKKAL 425
GY K E +KKA+
Sbjct: 168 GYSVGGLMVKTTERIKKAI 186
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 139/292 (47%), Gaps = 7/292 (2%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ + IE+A F + EK VY+ ++++ + + ++A ++ +M D+GL+
Sbjct: 305 FSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPS 364
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIV 245
Y ++++ + G + L++EM+ KGID + F+ L+ C + E + ++
Sbjct: 365 AHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEAL-RLQ 423
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
+ME +G+ D Y + ASG K D+A +L S V + + ++ +I Y
Sbjct: 424 VVMEK-KGLESDVFAYNSIASGLCKLNRKDEAKGLLF-SMVERGVSPNTMSFTTLIDIYC 481
Query: 306 ACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
GN + RV++ ++ V N Y +I K M+ A K+ +E E+R L D+
Sbjct: 482 KEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVY 541
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
LI C G + A L + RG PNV T+ M +G ++ +SE+
Sbjct: 542 TCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEE 593
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 35/186 (18%)
Query: 121 DVAIRLDLIAKVQGIEQAASYFNCVPEKL-KL-------------------PSV--YIAL 158
D A+RL ++ + +G+E +N + L KL P+ + L
Sbjct: 417 DEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTL 476
Query: 159 LNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGI 218
++ Y + +A+ + ++M ++G V I YN +++ Y + GN K+ L E+E +G+
Sbjct: 477 IDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGL 536
Query: 219 DCDKYTFSILLSACAAASDGEGIDKIVAMM------EADRGVVLDWTVYATAASGYVKAG 272
D YT C + GE ID V M RG+V + Y SG K G
Sbjct: 537 IPDVYT-------CTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDG 589
Query: 273 LSDKAL 278
S++A
Sbjct: 590 RSEEAF 595
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 117/300 (39%), Gaps = 32/300 (10%)
Query: 127 DLIAKVQGIEQAASYFNC--VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
D + K Q + FNC V + L++P IA L AC +S +R
Sbjct: 104 DKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACNESK----------CNRAKF 153
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI 244
K+ ++ + VY + + ME+KG D+ + + L A G +D
Sbjct: 154 KEKF-FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYL---LALRRGGQVDSC 209
Query: 245 VAMMEADRGVVLDWTVYA--TAASGYVKAG-------LSDKALAVLRKSEVLMMHNKFSR 295
+ + ++ TVY+ G K G L D+ A K+ V+ +N F
Sbjct: 210 LRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVT-YNAFIE 268
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
Y + G ++L + + K+ + Y +I +E A+++FEE
Sbjct: 269 GY----FKRLDLGGVAEILTLME--KEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMR 322
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+ + D+ + +I CR G + +A L + +G P+ T+ + G + Q E
Sbjct: 323 EKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQME 382
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 138/352 (39%), Gaps = 29/352 (8%)
Query: 93 FRLYK-RFSHALQISMWMTK-KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLK 150
F+LY+ R S L S + + F D +R+ + ++ A + C K K
Sbjct: 95 FKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACNESKCNRAKFK 154
Query: 151 LPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS-- 208
+ L YA K +A + M +G ID S + ++DS
Sbjct: 155 -EKFFDLLFRVYADNKMFGEALEAFEHMEKKGF---HIDERSCLVYLLALRRGGQVDSCL 210
Query: 209 -LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
M ++ Y+ +I+L D E K++ + A +GV + Y G
Sbjct: 211 RFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAA-KGVKANVVTYNAFIEG 269
Query: 268 YVKAGLSDKALAVLRKSEVLMMHNKFSRA-----YDFVITQYAACGNKDDVLRVWKRYKQ 322
Y K L + +E+L + K A Y +I ++ G ++ R+++ ++
Sbjct: 270 YFKR------LDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMRE 323
Query: 323 ---NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
VY Y +IS + ++ A +F+E + L LI C+ G +
Sbjct: 324 KGIEADVYV--YTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQM 381
Query: 380 HKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAG 431
A+ L+ + Q +G + N + + GY ++ + EA++ +V+ + G
Sbjct: 382 EAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVD---EALRLQVVMEKKG 430
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 9/227 (3%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y LLNAY + EKA + +MR + YN++++ Y G +K+ SL+HEME
Sbjct: 403 YTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEME 462
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ GI D + S LL+AC ID ++ + RG+ L+ Y + Y+ G
Sbjct: 463 KDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKF-RGIELNIVAYNSGIGSYLSFGDY 521
Query: 275 DKAL---AVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRG 330
+KAL A + S V N + Y+ +I+ G + L+ ++ + +
Sbjct: 522 EKALKLYATMMASNV----NPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEV 577
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
Y +I S +K D + AE F ++ D+ +I AY G
Sbjct: 578 YSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHG 624
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 152/387 (39%), Gaps = 60/387 (15%)
Query: 59 PMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLT 118
P DP+ ++ +L+ W GR ++I++ HA+ + WM + N+
Sbjct: 97 PRADPH-AVDAVLNCWA--GR-FARRNFPLLIREMAFSGSLEHAVYVFCWMKNQENYCAR 152
Query: 119 PADVAIRLDLIAKVQGIEQAASYF------NCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
+ + L A+ ++QA F C P+ +Y +L+NA+A A A
Sbjct: 153 NDIYGMMIQLHARHNQVDQARGLFFEMQEWRCKPDA----DIYNSLINAHARAGLWRWAI 208
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA- 231
IM M + YN+++N GN+KK L +M G+ D T +I+LSA
Sbjct: 209 NIMDDMLRAAIPPSRATYNNVVNACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAF 268
Query: 232 -----------------------------------CAAASDGEGIDKIVAMMEADRGVVL 256
G+ +D + +M E
Sbjct: 269 KNGFQYTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSP 328
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDV 313
D Y + Y G + AV +M+ +Y+ ++ YA+ G +
Sbjct: 329 DVVTYTSIIHSYYVCGQVENCKAVFD----MMVAEGVKPNIVSYNALLGAYASHGMHTEA 384
Query: 314 LRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP-NHLID 371
++K KQN L+ Y ++++ + E A ++F E +N C ++ N LID
Sbjct: 385 FGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMR-KNSCKPNKVSYNALID 443
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNV 398
AY G+ +A +L+++ + G P+V
Sbjct: 444 AYGSAGMFKEAISLLHEMEKDGIPPDV 470
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 9/272 (3%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y LLNAY + EKA ++MR + YN++++ Y G +K+ SL+HEME
Sbjct: 405 YTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEME 464
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ GI D + S LL+AC ID I+ ++ RG+ L+ Y + Y+ G
Sbjct: 465 KDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKS-RGIKLNIVCYNSGIGSYLNFGDY 523
Query: 275 DKAL---AVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRG 330
KAL AV+ S V N + Y+ +I+ G + L+ ++ + +
Sbjct: 524 GKALELYAVMMASNV----NPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEV 579
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I S +K + AE F + D+ +I+AY G A L + +
Sbjct: 580 YSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEME 639
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+P+ + + +Q E+ ++ M+
Sbjct: 640 GNTVQPDAIICSSLMEALNRGSQHERVLQLME 671
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 141/358 (39%), Gaps = 56/358 (15%)
Query: 88 IIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYF----- 142
++I++ HA+ + WM + N+ + + L A+ I+QA F
Sbjct: 124 LLIREITFAGSLQHAVHVFRWMKNQENYCARNDIYGMMIRLHARHSQIDQARGLFFEMQE 183
Query: 143 -NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
C P+ +Y +L++A+A A A IM M + YN+++N G
Sbjct: 184 WRCKPDA----DIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAG 239
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD------------------------ 237
N+KK L +M G+ D T +I+LSA S
Sbjct: 240 NWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLN 299
Query: 238 ------------GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
GE I+ + +M E D Y + Y G + AV
Sbjct: 300 IVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFD--- 356
Query: 286 VLMMHNKFSR----AYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLK 340
MM + + +Y+ ++ YA+ G D L ++K KQN L+ Y ++++ +
Sbjct: 357 --MMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGR 414
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
E A + F+E + +I N LIDAY G+ +A +L+++ + G P+V
Sbjct: 415 SGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDV 472
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 143/320 (44%), Gaps = 20/320 (6%)
Query: 107 MWMTKKSNFVLTPADVAIR--LDLIAKVQGIEQAASYFNCVPEKLKLP--SVYIALLNAY 162
+ M + V P VA +D K + +A FN + ++ P S Y ++NA
Sbjct: 202 LRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNAL 261
Query: 163 ACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDK 222
A++ +KAE I++QM D+G++ YNS++ Y TG +K+ + +M +GI D
Sbjct: 262 CKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDV 321
Query: 223 YTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL 281
T S++ S C + D +M A +G D Y +GY G L L
Sbjct: 322 VTLNSLMASLCKHGKIKDARDVFDSM--AMKGQKTDIFSYKIMLNGYATKG----CLVDL 375
Query: 282 RKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISS 337
+ LM+ + S ++ +I YA CG D ++ + Q ++ Y VI++
Sbjct: 376 TELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAA 435
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
L + M+ A + F + + + I + LI +C G L KA+ L+ + +G P+
Sbjct: 436 LCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPD 495
Query: 398 VRTWYLMATGYLQNNQSEKG 417
+ + ++ NN + G
Sbjct: 496 IGCF-----NFIINNLCKLG 510
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 155/363 (42%), Gaps = 36/363 (9%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+L Q V++G D +I + ++ A+++S MT + + P DV L+
Sbjct: 273 ILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQG---ILP-DVVTLNSLM 328
Query: 130 A---KVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
A K I+ A F+ + K + + Y +LN YA + M G+
Sbjct: 329 ASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIA 388
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDK 243
+ +N ++ Y + G + + +EM E+G++ D T+S +++A C + ++K
Sbjct: 389 PDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEK 448
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYDF 299
M+ D+GV + Y G+ G KA K VL M NK R ++F
Sbjct: 449 FNQMI--DQGVAPSISTYHFLIQGFCTHGDLLKA-----KDLVLQMMNKGMRPDIGCFNF 501
Query: 300 VITQYAACGNKDDVLRVWK-----RYKQNLKVYNR---GYICVISSLLKFDGMESAEKIF 351
+I G D ++ N+ VYN GY C++ ME+A ++F
Sbjct: 502 IINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGY-CLVGK------MENALRVF 554
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
+ S + ++ + L++ YC+ G + + +L + +G +P+ + ++ G Q
Sbjct: 555 DVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQA 614
Query: 412 NQS 414
++
Sbjct: 615 GRT 617
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY L+N Y ++ + +++ +G+ T YN +++ +Q G HEM
Sbjct: 568 VYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEM 627
Query: 214 EEKGIDCDKYTFSILLSA 231
E GI D+YT+SI+L
Sbjct: 628 TESGIAMDRYTYSIVLGG 645
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 84/208 (40%), Gaps = 12/208 (5%)
Query: 223 YTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL- 281
+T+ IL+ C A + + G+ +D + + G +A + +AL +L
Sbjct: 109 HTYGILMDCCTRAHRPKLTLAFFGQV-LKTGLGIDTIMISNLLRGLCEAKRTAEALDILL 167
Query: 282 -RKSEVLMMHNKFSRAYDFVITQYAAC-----GNKDDVLRVWKRYKQNLKVYNRGYICVI 335
R + + + FS + I + C G D++LR+ Y VI
Sbjct: 168 HRMPHLGCVPDVFS----YCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVI 223
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
K + A +F E R + D+ N +++A C+ + KAE ++ + +G
Sbjct: 224 DGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVL 283
Query: 396 PNVRTWYLMATGYLQNNQSEKGVEAMKK 423
P+ T+ + GY Q ++ V KK
Sbjct: 284 PDNWTYNSLIYGYSSTGQWKEAVRVSKK 311
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 120/262 (45%), Gaps = 7/262 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT--IDYNSMMNVYYQTGNYKKLDSLMH 211
VY +L+ AY + KA I + M+ +V K + YN++++ + G+Y +
Sbjct: 158 VYSSLICAYGRSGKLAKAVEIFEAMK---VVCKPNLVVYNAVIDACSKGGDYPTALRIFR 214
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
EM E+G+ D+ TF+ L+SA A+ E D+I A ME +RG+ D Y T + Y +
Sbjct: 215 EMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEME-ERGIARDDVTYNTLIATYCRG 273
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRG 330
G A++ Y +I YA G + + +++ + QN++
Sbjct: 274 GQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGIC 333
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y ++ + + A I E DI N L+D+Y ++G +A +L+ + +
Sbjct: 334 YNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMK 393
Query: 391 LRGTEPNVRTWYLMATGYLQNN 412
RG PN+ T+ + Y ++
Sbjct: 394 QRGASPNILTYSALIDAYCKHG 415
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 127/285 (44%), Gaps = 25/285 (8%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY A+++A + A I ++M ++G+ I +N++++ + +++ D + EM
Sbjct: 192 VYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEM 251
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
EE+GI D T++ L++ ++ M G+ Y+T GY K GL
Sbjct: 252 EERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGL 311
Query: 274 SDKALAVLRKSEVLMMHNKFSRA----YDFVITQYAACGNKDDVLRVWKR-----YKQNL 324
+ +A+A+ ++ M N+ Y+ ++ +A GN D+ + + + +++
Sbjct: 312 AHEAIALFQE-----MRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDI 366
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
YN ++ S K A + EE + R +I + LIDAYC+ G A
Sbjct: 367 VTYN----ALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMA 422
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE 429
L + G +P+V + + G +N + +AL LLE
Sbjct: 423 LFQDVKKAGLQPDVVLYSTLVDGCCKNGSPD-------EALALLE 460
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRD 180
A ++ +AK GIE PSV Y +++ YA A +A + Q+MR+
Sbjct: 280 AALMETMAKSSGIE---------------PSVITYSTMIDGYAKLGLAHEAIALFQEMRN 324
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
+ + I YN+M++++ + GN+ + S+ MEE G D T++ LL +
Sbjct: 325 QNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFRE 384
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR 282
++ M+ RG + Y+ Y K G A+A+ +
Sbjct: 385 AMSLLEEMK-QRGASPNILTYSALIDAYCKHGFHRDAMALFQ 425
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEK--LKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D+ A++ ++A S + E K Y ALL++Y +A ++++M+ RG
Sbjct: 338 VDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGA 397
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ Y+++++ Y + G ++ +L ++++ G+ D +S L+ C D+
Sbjct: 398 SPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSP---DE 454
Query: 244 IVAMME--ADRGVVLDWTVYATAASGY 268
+A++E AD G+ + Y + Y
Sbjct: 455 ALALLEEMADNGIRPNVITYNSLLDAY 481
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 120/262 (45%), Gaps = 7/262 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT--IDYNSMMNVYYQTGNYKKLDSLMH 211
VY +L+ AY + KA I + M+ +V K + YN++++ + G+Y +
Sbjct: 157 VYSSLICAYGRSGKLAKAVEIFEAMK---VVCKPNLVVYNAVIDACSKGGDYPTALRIFR 213
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
EM E+G+ D+ TF+ L+SA A+ E D+I A ME +RG+ D Y T + Y +
Sbjct: 214 EMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEME-ERGIARDDVTYNTLIATYCRG 272
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRG 330
G A++ Y +I YA G + + +++ + QN++
Sbjct: 273 GQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGIC 332
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y ++ + + A I E DI N L+D+Y ++G +A +L+ + +
Sbjct: 333 YNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMK 392
Query: 391 LRGTEPNVRTWYLMATGYLQNN 412
RG PN+ T+ + Y ++
Sbjct: 393 QRGASPNILTYSALIDAYCKHG 414
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 127/285 (44%), Gaps = 25/285 (8%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY A+++A + A I ++M ++G+ I +N++++ + +++ D + EM
Sbjct: 191 VYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEM 250
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
EE+GI D T++ L++ ++ M G+ Y+T GY K GL
Sbjct: 251 EERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGL 310
Query: 274 SDKALAVLRKSEVLMMHNKFSRA----YDFVITQYAACGNKDDVLRVWKR-----YKQNL 324
+ +A+A+ ++ M N+ Y+ ++ +A GN D+ + + + +++
Sbjct: 311 AHEAIALFQE-----MRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDI 365
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
YN ++ S K A + EE + R +I + LIDAYC+ G A
Sbjct: 366 VTYN----ALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMA 421
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE 429
L + G +P+V + + G +N + +AL LLE
Sbjct: 422 LFQDVKKAGLQPDVVLYSTLVDGCCKNGSPD-------EALALLE 459
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 122/315 (38%), Gaps = 69/315 (21%)
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRD 180
A ++ +AK GIE PSV Y +++ YA A +A + Q+MR+
Sbjct: 279 AALMETMAKSSGIE---------------PSVITYSTMIDGYAKLGLAHEAIALFQEMRN 323
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
+ + I YN+M++++ + GN+ + S+ MEE G D T++ LL +
Sbjct: 324 QNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFRE 383
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
++ M+ RG + Y+ Y K G A+A+ + +
Sbjct: 384 AMSLLEEMK-QRGASPNILTYSALIDAYCKHGFHRDAMALFQDVK--------------- 427
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
G + DV+ Y ++ K + A + EE +
Sbjct: 428 -----KAGLQPDVVL---------------YSTLVDGCCKNGSPDEALALLEEMADNGIR 467
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYL-----MATGYLQNNQSE 415
++ N L+DAY R+ L+ +R T P +R + L + +Q++Q
Sbjct: 468 PNVITYNSLLDAYGRQCLM-----------VRKTFPKLRFFLLPRVTMLLKPSMQDDQQS 516
Query: 416 KGVEAMKKALVLLEA 430
K+ALVL A
Sbjct: 517 LVDPKQKQALVLAAA 531
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 137/305 (44%), Gaps = 13/305 (4%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
L+++ K + QA F + ++ LP+V + ++N Y A ++KA+ + + MR
Sbjct: 169 LEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALC 228
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
Y ++MN + + GN + + + E++ G D YT++ LL A + G +
Sbjct: 229 PPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKE 288
Query: 244 IV-AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDF 299
+ AM+EA GV D Y + +AGL+ A AV M F +++
Sbjct: 289 VFQAMVEA--GVRPDQVSYNILIDAFGRAGLTADAQAVYDS----MKEAGFKPTMKSHML 342
Query: 300 VITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
+++ YA G + R+ + + + +K + ++S+ ++ E + E S
Sbjct: 343 LLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSV 402
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
DI N LI+AY + G + KAE + + +G P+V +W + Y Q K V
Sbjct: 403 AKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCV 462
Query: 419 EAMKK 423
+K
Sbjct: 463 SIFQK 467
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 155/370 (41%), Gaps = 25/370 (6%)
Query: 68 VPLLDQWVEEG---RPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
V L+ +W+ +G +P D+ ++I + K++ A + M +F P + +
Sbjct: 66 VILILEWILQGTMFKP-DVGCFNMLIDAYGKSKQWREAEKTFHLM---KDFQCLPTETSF 121
Query: 125 RLDLIAKVQGI--EQAASYFNCVPEKLKLPSVY-------IALLNAY--ACAKSA--EKA 171
+ L A +G+ E+A F+ + E P IA N Y KS +A
Sbjct: 122 NVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQA 181
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E + M+ +G++ + M+N+Y + K D L M + + YT++ L++A
Sbjct: 182 EDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNA 241
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMH 290
A + ++I A +++ G + D Y Y + A V + E +
Sbjct: 242 HAREGNCVRAEEIFAELQS-VGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRP 300
Query: 291 NKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEK 349
++ S Y+ +I + G D V+ K+ K + ++ ++SS K + AE+
Sbjct: 301 DQVS--YNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAER 358
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
+ E E+ + D + N L+ AY G + + E+L+ +P++ T + Y
Sbjct: 359 LVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTLINAYA 418
Query: 410 QNNQSEKGVE 419
Q EK E
Sbjct: 419 QGGYIEKAEE 428
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
L+NAYA EKAE + + +GL + + S+M Y Q ++K S+ +M + G
Sbjct: 413 LINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKMVKAG 472
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
D+ T + LS+C + E + ++ M+E R
Sbjct: 473 CIPDRATAKVFLSSCRSP---EQVKEVTDMIERHR 504
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 149/343 (43%), Gaps = 15/343 (4%)
Query: 64 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA 123
+D+M + + E G D+ +IK + K+ AL++ + MT + +P V+
Sbjct: 143 DDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVS 202
Query: 124 IR--LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMR 179
+D K +++A F+ + + P V Y +L++ A++ +KA I+Q M
Sbjct: 203 YNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMF 262
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS-ACAAASDG 238
D+G++ T YN M+ Y G ++ L+ +M G+ D T+S+L+ C
Sbjct: 263 DKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCA 322
Query: 239 EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---R 295
E +M+ +G + T+Y GY G AL +R LM+ + R
Sbjct: 323 EARSVFDSMVR--KGQKPNSTIYHILLHGYATKG----ALIDVRDLLDLMIRDGIPFEHR 376
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
A++ +I YA G D + + +QN L+ Y VI L K +E A F +
Sbjct: 377 AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQM 436
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
S L +I LI C G K E L ++ RG P+
Sbjct: 437 VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPD 479
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 153/359 (42%), Gaps = 24/359 (6%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
LLD + +G P + I+I + + A+ M + L P V+ +
Sbjct: 362 LLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNG---LRPDVVSYSTVIH 418
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
++ K +E A +FN + + P++ + +L++ +K E + +M +RG+
Sbjct: 419 ILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHP 478
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKI 244
I N++M+ + G + + G+ D +++ L+ C E I ++
Sbjct: 479 DAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQL 538
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
M+ G+ D Y + +GY K G + ALA+ R E+ KF IT
Sbjct: 539 DRMVSI--GLRPDSWTYNSLLNGYFKNGRVEDALALYR--EMFRKDVKFC-----AITSN 589
Query: 305 AACGNKDDVLRVWKRYKQNLKVYNRG-------YICVISSLLKFDGMESAEKIFEEWESR 357
R+ + +K+ +RG Y V+ L + ++ A ++FE+ S+
Sbjct: 590 IMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSK 649
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
D+R + +I+A + G + +A++L LRG P+V T+ LM +++ E+
Sbjct: 650 EFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEE 708
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y VI K ++ A +F E + L D+ N LID C+ + KA ++
Sbjct: 203 YNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMF 262
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKK 450
+G P+ RT+ +M GY Q E+ V +KK +G+ +P + + YY K
Sbjct: 263 DKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKM-----SGSGLQPDVVTYSLLIQYYCK 317
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 10/209 (4%)
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTV--YAT 263
+D + M E G D ++++ L+ + +++ M AD G V Y T
Sbjct: 146 MDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNT 205
Query: 264 AASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKR- 319
G+ K G DKA + + MM Y+ +I D + + +
Sbjct: 206 VIDGFFKEGEVDKAYFLFHE----MMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHM 261
Query: 320 YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
+ + + R Y +I +E A ++ ++ L D+ + LI YC+ G
Sbjct: 262 FDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRC 321
Query: 380 HKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+A ++ +G +PN ++++ GY
Sbjct: 322 AEARSVFDSMVRKGQKPNSTIYHILLHGY 350
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 133/296 (44%), Gaps = 17/296 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y ++ Y A +KA ++ M +GL I Y +M+ Y ++ +L EM
Sbjct: 259 TYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEM 318
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+EKG+ + FS+++ C EG M+ +G + +Y GY K G
Sbjct: 319 DEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIR--KGSKPNVAIYTVLIDGYAKTG 376
Query: 273 LSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYN 328
+ A+ +L + M+ F+ Y V+ G ++ + ++ + N L + +
Sbjct: 377 SVEDAIRLLHR----MIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINS 432
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y +I L K ++ AE++FEE + D N LIDA+ + G + +A L +
Sbjct: 433 MFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKR 492
Query: 389 -AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAA 443
+ G + V T+ ++ +G + +++E EA+K ++++ G P+ CL A
Sbjct: 493 MEEEEGCDQTVYTYTILISGMFKEHRNE---EALKLWDMMIDKGI--TPTAACLRA 543
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 11/270 (4%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y++L++ A AK ++ I ++R NS++ + + G ++L + +M+
Sbjct: 155 YVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMK 214
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
E GI+ YT++ L++ +A + +++ +ME+ R + D Y T GY KAG +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR-IKPDVVTYNTMIKGYCKAGQT 273
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFV-ITQYAACGNKDDVLRVWKRYKQ----NLKVYNR 329
KAL LR +M K A +T AC D Y++ L+V
Sbjct: 274 QKALEKLR-----VMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPH 328
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
+ VI L K + +FE + ++ I LID Y + G + A L+++
Sbjct: 329 AFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRM 388
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
G P+V T+ ++ G +N + E+ ++
Sbjct: 389 IDEGFNPDVVTYSVVVNGLCKNGRVEEAMD 418
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 122/309 (39%), Gaps = 6/309 (1%)
Query: 99 FSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YI 156
FS + + M +K + P ++ + + K + + + F + K P+V Y
Sbjct: 308 FSSCVALYQEMDEK-GLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYT 366
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
L++ YA S E A ++ +M D G + Y+ ++N + G ++
Sbjct: 367 VLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFN 426
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
G+ + +S L+ A + +++ M +++G D Y + K G D+
Sbjct: 427 GLAINSMFYSSLIDGLGKAGRVDEAERLFEEM-SEKGCTRDSYCYNALIDAFTKHGKVDE 485
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVIS 336
ALA+ ++ E ++ Y +I+ ++ L++W + +S
Sbjct: 486 ALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALS 545
Query: 337 SLLKFDG-MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
+ L G + A KI +E + D + +I+ C+ G + +A L RG E
Sbjct: 546 TGLCLSGKVARACKILDELAPMGVILDAACED-MINTLCKAGRIKEACKLADGITERGRE 604
Query: 396 PNVRTWYLM 404
R +M
Sbjct: 605 VPGRIRTVM 613
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 161/366 (43%), Gaps = 23/366 (6%)
Query: 68 VPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK---SNFVLTPADVAI 124
V +L + V D L ++++ L R A ++ M + +N + A V
Sbjct: 59 VQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALV-- 116
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRG 182
D + K + +++A + + E+ P+V Y +++ + A+ ++A M+QM G
Sbjct: 117 --DGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEG 174
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI 241
I Y +++ + ++ + + L+ E+ +G D T+S ++ C A + +
Sbjct: 175 CHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 234
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYD 298
D M A + Y + GY +AG D+A+ +L K M+ +K + Y
Sbjct: 235 DIFEEMSCAPTAIT-----YNSLIGGYCRAGDMDEAIRLLGK----MVDDKCAPDVVTYT 285
Query: 299 FVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
+++ + G DD ++++ N L + ++ L ME A ++ EE R
Sbjct: 286 TLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR 345
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
I N ++D YC+ + KAE L+ + RG PN T+ ++ G + ++++
Sbjct: 346 GCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQA 405
Query: 418 VEAMKK 423
++ + +
Sbjct: 406 LQYLDQ 411
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 107/256 (41%), Gaps = 19/256 (7%)
Query: 144 CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
C P+ + Y L++A+ + A + QQM L + + S+++ G
Sbjct: 277 CAPDVV----TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRM 332
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYAT 263
+ L+ E+ +G YT++ ++ A+ +++VA + RG V + Y
Sbjct: 333 EDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRS-RGFVPNTVTYNI 391
Query: 264 AASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA-YDFVITQYAACGNKDDVLRVWKRYKQ 322
+G +AG +D+AL L + S A Y ++ G DD ++ ++ Q
Sbjct: 392 LVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQ 451
Query: 323 NLKVYNRGYI-------CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
RGY+ V+ +L K + A ++ EE + ++ AYCR
Sbjct: 452 ------RGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCR 505
Query: 376 RGLLHKAETLIYKAQL 391
G++ KA+ L + +L
Sbjct: 506 AGMIQKADELASELRL 521
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 97/252 (38%), Gaps = 15/252 (5%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D + LL + V++ D+ ++ F R A ++ M L+P DV
Sbjct: 263 DEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANK---LSP-DVVT 318
Query: 125 RLDLIAKVQG---IEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMR 179
L+ + G +E A + + P++Y +++ Y A KAE ++ R
Sbjct: 319 FTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFR 378
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYT--FSILLSACAAASD 237
RG V T+ YN ++ + G + + ++ +G C ++I+L A D
Sbjct: 379 SRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILD--ALCRD 436
Query: 238 GEGIDKIVAMMEA-DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA 296
G D + E RG V +AT KA +A +L + + H
Sbjct: 437 GRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEM-IKYGHTPGPGT 495
Query: 297 YDFVITQYAACG 308
D V++ Y G
Sbjct: 496 CDAVVSAYCRAG 507
>gi|297851236|ref|XP_002893499.1| hypothetical protein ARALYDRAFT_335936 [Arabidopsis lyrata subsp.
lyrata]
gi|297339341|gb|EFH69758.1| hypothetical protein ARALYDRAFT_335936 [Arabidopsis lyrata subsp.
lyrata]
Length = 198
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 19/189 (10%)
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPS-VYIALLNAYA-CAKSAEKAEIIMQQMRDRG 182
RL LI V G+E+A +F +P+ + S +Y +L+ Y AK+ EKAE+I +MR G
Sbjct: 12 RLHLIDNVLGLEEAEKFFETIPQDKRDDSDLYTTILSFYTRSAKTLEKAELIFHKMRKLG 71
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ K +N MM++Y Q G + ++ +ME+ D T +I+L A +
Sbjct: 72 YLSKPCPFNHMMSLYNQIGKRDMVHQILSQMEKNNAKSDNRTLNIILGLLAESHSS---- 127
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
LDW + A Y+K GL +A+ +LR++E ++ + S+ YD
Sbjct: 128 ------------TLDWRMSCEMAKTYLKQGLVVEAIKMLRRAEESVV-DPDSKKYDCKQV 174
Query: 303 QYAACGNKD 311
C N +
Sbjct: 175 VRERCQNHN 183
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 159/365 (43%), Gaps = 21/365 (5%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
LL++ + G ++ +I + L RF AL M M + NF P D + L +
Sbjct: 359 LLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLR-NF--KPNDGLLTLLVS 415
Query: 130 AKVQGIEQAAS---YFNCVPEKLKLPSVYI-ALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
Q +Q+ + ++ + + +V AL++ A S E+A ++++M +RGLV
Sbjct: 416 GLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVL 475
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
+I YN+++ + G ++ L EM +GI D YT+++LL E +
Sbjct: 476 DSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLW 535
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
+ + G D Y GY KA ++ + ++ V M + + Y +I Y
Sbjct: 536 HECKKN-GNFPDAYTYGIMIDGYCKANRVEEGEKLFQEM-VTMKIEQNAVVYGTLIRAYC 593
Query: 306 ACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
GN + R+ + + + + Y +I L ++SA ++ +E L ++
Sbjct: 594 ENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVV 653
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY-----------LQNNQ 413
LI YC+ G +HK ++++ + + PN T+ +M G+ L N
Sbjct: 654 CYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEM 713
Query: 414 SEKGV 418
++KG+
Sbjct: 714 AQKGI 718
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 136/338 (40%), Gaps = 38/338 (11%)
Query: 147 EKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
E++K PS+ Y L+N + ++A I+++M DRG + YN++++ Y + GN
Sbjct: 261 ERVK-PSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNIS 319
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
+ +M GI + T + L+ ++ E + ++ M GV+ T +
Sbjct: 320 TALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVI 379
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA-YDFVITQYAACGNKDDVLRVWKR---- 319
+K L ++ E+L+ + K + +++ G + + + +W R
Sbjct: 380 HRLCLKCRFDSALLFIM---EMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEK 436
Query: 320 -YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
+ N N +I L + E A K+ +E R L D N LI A C+ G
Sbjct: 437 GFAANTVTSNA----LIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGK 492
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWK--- 435
+ + L + RG +P++ T+ ++ G + E EAG W
Sbjct: 493 VEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIE-------------EAGGLWHECK 539
Query: 436 -----PSKECLAACL-GYYKKERDIEGADYFIKLLTGK 467
P + GY K R EG F +++T K
Sbjct: 540 KNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMK 577
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 94/215 (43%), Gaps = 3/215 (1%)
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ KG+ T + LLS+ A++ + ++ +M GV D +++T + + G
Sbjct: 153 LANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIM-CHCGVTPDVYLFSTMVNAFCTGG 211
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGY 331
D A+ + RK E + + Y+ +I G D+ + ++ K+ +K Y
Sbjct: 212 RVDDAIELFRKMEKVGVAPNVV-TYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTY 270
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I+ L+K + + A I +E R + + N LID YCR G + A +
Sbjct: 271 GVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMIS 330
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
G PN T + GY ++NQ E +++ L
Sbjct: 331 NGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLT 365
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y AL+ Y K + I+Q+M + I Y M+N + + GN K L
Sbjct: 650 PNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKL 709
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
++EM +KGI D T++ L + E K+ +M G+ LD Y T G+
Sbjct: 710 LNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTG-GISLDDITYTTLIDGWH 768
Query: 270 K 270
K
Sbjct: 769 K 769
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 110/277 (39%), Gaps = 5/277 (1%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P VY+ ++NA+ + A + ++M G+ + YN++++ + G +
Sbjct: 195 PDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQF 254
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+ME++ + T+ +L++ + + I+ M +DRG + VY T GY
Sbjct: 255 KEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEM-SDRGYAPNNVVYNTLIDGYC 313
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
+ G AL + R + + S + +I Y + + + V N+
Sbjct: 314 RIGNISTALQI-RDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQ 372
Query: 330 G-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
G + VI L +SA E RN + + L+ C+ G +A L Y+
Sbjct: 373 GTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYR 432
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
+G N T + G + E+ + +K+ L
Sbjct: 433 LLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEML 469
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 120/320 (37%), Gaps = 18/320 (5%)
Query: 113 SNFVLTPADVAIRLDLIAKVQ-------GIEQAASYFNCVPEKLKLPSVYIA--LLNAYA 163
S + PA +DL+ V G F+ + K PS+ LL++
Sbjct: 114 SETLFEPAVAVTVVDLLIHVYSTQFKHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLV 173
Query: 164 CAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKY 223
A + + + M G+ +++M+N + G L +ME+ G+ +
Sbjct: 174 KANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVV 233
Query: 224 TF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR 282
T+ +I+ C E + ME +R V Y +G VK D+A +L+
Sbjct: 234 TYNNIIHGLCKNGRLDEAF-QFKEKMEKER-VKPSLVTYGVLINGLVKLERFDEANCILK 291
Query: 283 K-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC--VISSLL 339
+ S+ N Y+ +I Y GN L++ N + C +I
Sbjct: 292 EMSDRGYAPNNV--VYNTLIDGYCRIGNISTALQIRDDMISN-GISPNSVTCNSLIQGYC 348
Query: 340 KFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVR 399
K + ME AE + EE + + +I C + A I + LR +PN
Sbjct: 349 KSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDG 408
Query: 400 TWYLMATGYLQNNQSEKGVE 419
L+ +G QN + + +E
Sbjct: 409 LLTLLVSGLCQNGKQSEAIE 428
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 151/343 (44%), Gaps = 45/343 (13%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
LL+Q + +G + +I + FS A + MT+++ LTP D+ LI
Sbjct: 475 LLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTREN---LTP-DLYCYNSLI 530
Query: 130 ---AKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
+ V +++A Y++ + EK P+ Y L++ Y+ A + EKAE ++ QM + GL
Sbjct: 531 IGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLN 590
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI 244
Y ++ Y+++ N +K+ S + M EKG+ D + I++ +++ + +
Sbjct: 591 PNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSV 650
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
++++E + G+V D +Y + SG+ KA +KA+ +L
Sbjct: 651 LSVIEKN-GLVPDSLIYGSLISGFCKAADMEKAVGLL----------------------- 686
Query: 305 AACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
D++ + K + + YN +I K D + A IF + L +
Sbjct: 687 ------DEMAK--KGIEPGISCYN----ALIDGFCKSDDISHARNIFNSIICKGLPPNCV 734
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
LID YC+ G + A L + G P+ + ++A G
Sbjct: 735 TYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAG 777
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 122/280 (43%), Gaps = 15/280 (5%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P VY L+ AY + E A+ ++++MR+ G + YN+++ + G ++
Sbjct: 241 PDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGY 300
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
EME+ G+ D +T+ +++ + ++ M G++ + VY+T G++
Sbjct: 301 KKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSC-AGLMPNVVVYSTLIDGFM 359
Query: 270 KAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-----YKQN 323
+ G +D+A ++++ S + NK + YD +I G R+ K+ Y +
Sbjct: 360 RQGNADEAFKIVKEMSAAGVQPNKIT--YDNLIRGLCKLGRMGRASRILKQMTKIGYMAD 417
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
YN VI L+ E A + E + ++ + +I+ C+ G +A
Sbjct: 418 TMTYN----LVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERAS 473
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
L+ + G +PN + + +GY + E +KK
Sbjct: 474 GLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKK 513
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 109/260 (41%), Gaps = 7/260 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY L++ Y S A +++M L YNS++ G + EM
Sbjct: 490 VYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEM 549
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
EKG + +T+ L+ + A + E ++++ M + G+ + +YA GY K+
Sbjct: 550 LEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQM-LNSGLNPNDFIYAQILEGYFKSDN 608
Query: 274 SDKALAVLRK--SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-G 330
+K + L+ + LM N R Y VI ++ G+ + V ++N V +
Sbjct: 609 LEKVSSTLKSMLEKGLMPDN---RLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLI 665
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +IS K ME A + +E + + I N LID +C+ + A +
Sbjct: 666 YGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSII 725
Query: 391 LRGTEPNVRTWYLMATGYLQ 410
+G PN T+ + GY +
Sbjct: 726 CKGLPPNCVTYTTLIDGYCK 745
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 112/269 (41%), Gaps = 15/269 (5%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+VY ++N +E+A +++QM GL Y +++ Y + G++
Sbjct: 451 PNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACET 510
Query: 210 MHEMEEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ +M + + D Y + S+++ E I+ M+E +G + Y GY
Sbjct: 511 LKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLE--KGFQPNDFTYGGLIHGY 568
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ----YAACGNKDDVLRVWKR-YKQN 323
AG +KA +L + M N DF+ Q Y N + V K ++
Sbjct: 569 SMAGNLEKAEQLLHQ-----MLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKG 623
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
L NR Y VI +L M++A + E L D I LI +C+ + KA
Sbjct: 624 LMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAV 683
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
L+ + +G EP + + + G+ +++
Sbjct: 684 GLLDEMAKKGIEPGISCYNALIDGFCKSD 712
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 36/256 (14%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+A I++QM G + T+ YN ++ + + N ++ L++EM + GI + YT+SI++
Sbjct: 401 RASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIII 460
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
+ + E ++ M AD G+ + VYA SGY + G A L+K
Sbjct: 461 NGLCQIGESERASGLLEQMIAD-GLKPNAFVYAPLISGYCREGSFSLACETLKK------ 513
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEK 349
+ +L YN +I L M+ A +
Sbjct: 514 -------------------------MTRENLTPDLYCYNS----LIIGLSNVGKMDEAIE 544
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
++E + + LI Y G L KAE L+++ G PN + + GY
Sbjct: 545 YYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYF 604
Query: 410 QNNQSEKGVEAMKKAL 425
+++ EK +K L
Sbjct: 605 KSDNLEKVSSTLKSML 620
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 106/242 (43%), Gaps = 28/242 (11%)
Query: 53 LYRMLSPMGDPNDSM-VPLLDQWVEEGRPLDMEQLRIIIKKF---------RLYKRFSHA 102
L++ML+ +PND + +L+ + + ++E++ +K RLY H
Sbjct: 581 LHQMLNSGLNPNDFIYAQILEGYFKSD---NLEKVSSTLKSMLEKGLMPDNRLYGIVIHN 637
Query: 103 LQISMWMTKKSNFV-------LTPADVAIRLDLIA---KVQGIEQAASYFNCVPEKLKLP 152
L S M + + L P D I LI+ K +E+A + + +K P
Sbjct: 638 LSSSGHMQAAVSVLSVIEKNGLVP-DSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEP 696
Query: 153 --SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLM 210
S Y AL++ + + A I + +GL + Y ++++ Y + G+ + L
Sbjct: 697 GISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLY 756
Query: 211 HEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
+EM +G+ D + +S+L + C+ + D + I M A RG + + + T G+ K
Sbjct: 757 NEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIA-RGYAI-ISSFNTLVHGFCK 814
Query: 271 AG 272
G
Sbjct: 815 RG 816
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 11/270 (4%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y++L++ + + ++ I + +++G + NS++ + G ++L + M+
Sbjct: 158 YVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMK 217
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
E GI+ YTF+ LL+ + E +++ +ME + + D Y T GY KAG +
Sbjct: 218 ESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGK-IGPDVVSYNTMIKGYCKAGNT 276
Query: 275 DKALAVLRKSEVLMMH-NKFSRAYDFVITQYAAC---GNKDDVLRVWKRYKQ-NLKVYNR 329
KA+ E + +K + +T AC GN D L +++ ++ L++
Sbjct: 277 KKAMEKFTDMEKRNLEPDKIT-----YLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPH 331
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y VI L K +FE + ++ I LIDAY + G +++A L +
Sbjct: 332 AYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERM 391
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+ G EP+ T+ ++ G ++ + ++ VE
Sbjct: 392 KGEGFEPDDVTYGVIVNGLCKSGRLDEAVE 421
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 138/322 (42%), Gaps = 51/322 (15%)
Query: 152 PSVYIA--LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PS+Y LLN + E AE + + M + + YN+M+ Y + GN KK
Sbjct: 223 PSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEK 282
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+ME++ ++ DK T+ L+ AC + + + + ME +RG+ + Y+ G
Sbjct: 283 FTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEME-ERGLEIPPHAYSLVIGGLC 341
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRA----YDFVITQYAACGNKDDVLRVWKRYK-QNL 324
K G + + +V M+ K +A Y +I Y GN ++ + +++R K +
Sbjct: 342 KDGRTVEGSSVFEN-----MNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGF 396
Query: 325 KVYNRGYICVISSLLK-----------------------------FDGM------ESAEK 349
+ + Y +++ L K DG+ + AEK
Sbjct: 397 EPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEK 456
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
FEE R D N LIDA + G + +A L + + G + V T+ ++ +G
Sbjct: 457 FFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLF 516
Query: 410 QNNQSEKGVEAMKKALVLLEAG 431
+ +++E EA+K ++++ G
Sbjct: 517 KEHRNE---EALKLWDLMIDKG 535
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 124/272 (45%), Gaps = 19/272 (6%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y L++ + A+ K E + ++M+ + L Y+S++N Y + GN ++ +
Sbjct: 211 PTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEV 270
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
E GI+ +++T+ L++ E + +V M+ RGV ++ V+ T GY
Sbjct: 271 FDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQV-RGVGINQIVFNTMIDGYC 329
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG----NKDD----VLRVWKRYK 321
+ + DKAL E+ M+ K D ACG N+ D +LR+ +
Sbjct: 330 RKNMVDKAL------EIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIM--IE 381
Query: 322 QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
+ ++ + Y +IS M A ++F E + N ++D Y ++G + +
Sbjct: 382 KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIRE 441
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
AE + + +G P++ ++ + G+ N +
Sbjct: 442 AERFKKEMEKKGLVPDIYSYAALVHGHCVNGK 473
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 147/334 (44%), Gaps = 49/334 (14%)
Query: 135 IEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
++QAA+ +C P+ + S + +++ Y + A ++ +M G+ + YNS++
Sbjct: 130 LKQAAT--SC-PDSVTPLSASV-VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLL 185
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--DR 252
+ Y + + ++ ++ ME +GI+ T++IL+ +AA D I K+ A+ E +
Sbjct: 186 DAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARD---ITKVEAVFEEMKSK 242
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD 312
+ D Y++ + Y +AG V R SEV +D + GN
Sbjct: 243 NLSGDVYFYSSVINAYCRAG------NVRRASEV----------FDECV------GN--- 277
Query: 313 VLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
++ Y +I+ K ME+AE + + + R + + + N +ID
Sbjct: 278 ----------GIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDG 327
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGT 432
YCR+ ++ KA + + G E +V T+ +A G + N+ + EA +++E G
Sbjct: 328 YCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMD---EAKNLLRIMIEKGV 384
Query: 433 RWKPSKECLAACLGYYKKERDIEGADYFIKLLTG 466
R P+ + + E D+ A + + G
Sbjct: 385 R--PNHVSYTTLISIHCNEGDMVEARRLFREMAG 416
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 124/272 (45%), Gaps = 19/272 (6%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y L++ + A+ K E + ++M+ + L Y+S++N Y + GN ++ +
Sbjct: 211 PTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEV 270
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
E GI+ +++T+ L++ E + +V M+ RGV ++ V+ T GY
Sbjct: 271 FDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQV-RGVGINQIVFNTMIDGYC 329
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG----NKDD----VLRVWKRYK 321
+ + DKAL E+ M+ K D ACG N+ D +LR+ +
Sbjct: 330 RKNMVDKAL------EIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIM--IE 381
Query: 322 QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
+ ++ + Y +IS M A ++F E + N ++D Y ++G + +
Sbjct: 382 KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIRE 441
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
AE + + +G P++ ++ + G+ N +
Sbjct: 442 AERFKNEMEKKGLVPDIYSYAALVHGHCVNGK 473
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 147/334 (44%), Gaps = 49/334 (14%)
Query: 135 IEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
++QAA+ +C P+ + S + +++ Y + A ++ +M G+ + YNS++
Sbjct: 130 LKQAAT--SC-PDSVTPLSASV-VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLL 185
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--DR 252
+ Y + + ++ ++ ME +GI+ T++IL+ +AA D I K+ A+ E +
Sbjct: 186 DAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARD---ITKVEAVFEEMKSK 242
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD 312
+ D Y++ + Y +AG V R SEV +D + GN
Sbjct: 243 NLSGDVYFYSSVINAYCRAG------NVRRASEV----------FDECV------GN--- 277
Query: 313 VLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
++ Y +I+ K ME+AE + + + R + + + N +ID
Sbjct: 278 ----------GIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDG 327
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGT 432
YCR+ ++ KA + + G E +V T+ +A G + N+ + EA +++E G
Sbjct: 328 YCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMD---EAKNLLRIMIEKGV 384
Query: 433 RWKPSKECLAACLGYYKKERDIEGADYFIKLLTG 466
R P+ + + E D+ A + + G
Sbjct: 385 R--PNHVSYTTLISIHCNEGDMVEARRLFREMAG 416
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 117/281 (41%), Gaps = 38/281 (13%)
Query: 137 QAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
+A F+ + EK P+V Y L+ +AE + + MR+ G++ YN+MM
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGV 254
+ Y + + KK L EM G+ + TF IL+ + K + M A GV
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM-ASFGV 329
Query: 255 VLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVL 314
V + VY GY KAG SE L +H++ K ++L
Sbjct: 330 VPNIFVYNCLIDGYCKAG---------NLSEALSLHSEI---------------EKHEIL 365
Query: 315 RVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
V+ Y +I L D ME A+ + +E + + + N LID YC
Sbjct: 366 P---------DVFT--YSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYC 414
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+ G + KA + + +G EPN+ T+ + GY + + E
Sbjct: 415 KEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKME 455
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 122/293 (41%), Gaps = 37/293 (12%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D K + +A S + + + LP V Y L+ E+A+ ++Q+M+ +G
Sbjct: 340 IDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGF 399
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ + YN++++ Y + GN +K + +M EKGI+ + TFS L+ A E
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMG 459
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH-NKFSRAYDFVIT 302
+ M +G++ D Y G+ K G + +A + ++ + +H N F+ + +I
Sbjct: 460 LYTEM-VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSC--LID 516
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
G D ++++ L G ++ E + R+LC
Sbjct: 517 GLCKDGRISDAIKLF---------------------LAKTGTDTTGSKTNELD-RSLCS- 553
Query: 363 IRIPNH-----LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
PNH LI C G + KA + G P+V T ++ G+ +
Sbjct: 554 ---PNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFR 603
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 99/252 (39%), Gaps = 19/252 (7%)
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
M RG + Y ++++ + G++ K L EM EK I ++IL+ S
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY 297
+ + M + G++ + Y T GY K KAL + ++ ++
Sbjct: 244 ISEAESMFRTMR-NSGMLPNLYTYNTMMDGYCKIAHVKKALELYQE---MLGDGLLPNVV 299
Query: 298 DFVITQYAACGNKDDVLRVWKRY---------KQNLKVYNRGYICVISSLLKFDGMESAE 348
F I C K D + +++ N+ VYN C+I K + A
Sbjct: 300 TFGILIDGLC--KTDEMVSARKFLIDMASFGVVPNIFVYN----CLIDGYCKAGNLSEAL 353
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+ E E + D+ + LI C + +A+ L+ + + +G PN T+ + GY
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413
Query: 409 LQNNQSEKGVEA 420
+ EK +E
Sbjct: 414 CKEGNMEKAIEV 425
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
Query: 111 KKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSA 168
KK F+ +D K +E+A + + EK P++ + L++ Y A
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
E A + +M +GL+ + Y ++++ +++ GN K+ L EM+E G+ + +T S L
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514
Query: 229 LSACAAASDGEGIDKI 244
+ DG D I
Sbjct: 515 ID--GLCKDGRISDAI 528
>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
Length = 867
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 157/369 (42%), Gaps = 30/369 (8%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
L ++ EEG D ++++ F A++ M M + + P+ V + +
Sbjct: 367 LFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRM---KSVRIAPSSVLVHTMIQ 423
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAK---------SAEKAEIIMQQM 178
K + E A FN E +IA + + C K + A ++ M
Sbjct: 424 GCLKAESPEAALEIFNDSFES------WIA--HGFMCNKIFLLFCKQGKVDAATSFLKMM 475
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG 238
+G+ + YN+MM + + N S+ EM EKG++ + +T+SIL+ D
Sbjct: 476 EQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDE 535
Query: 239 EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---R 295
+ ++ M A + +Y T +G K G + KA +L+ L+ ++S
Sbjct: 536 QNAWDVINQMNAS-NFEANEVIYNTIINGLCKVGQTSKAKEMLQN---LIKEKRYSMSCT 591
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEW 354
+Y+ +I + G+ D + ++ +N K N + +I+ K + M+ A ++ E
Sbjct: 592 SYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
+S L D+ LID +C++ + A TL + G PNV + + +G+ +
Sbjct: 652 KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKM 711
Query: 415 EKGVEAMKK 423
+ ++ KK
Sbjct: 712 DAAIDLYKK 720
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 123/305 (40%), Gaps = 58/305 (19%)
Query: 118 TPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPS---VYIALLNAYACAKSAEKAEII 174
TP D+ + LDL+ +++G KL +P+ Y +++ A+ + E+A +
Sbjct: 287 TP-DLVMALDLLREMRG-------------KLGVPASQETYTSVIVAFVKEGNMEEAVRV 332
Query: 175 MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAA 234
M +M G+ I S++N Y + K L + MEE+G+ DK FS+++
Sbjct: 333 MDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCK 392
Query: 235 ASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
+ E + M++ R + + T G +KA + AL +
Sbjct: 393 NMEMEKAIEFYMRMKSVR-IAPSSVLVHTMIQGCLKAESPEAALEIF------------- 438
Query: 295 RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLL--KFDGMESAEKIFE 352
+D W + G++C LL K +++A +
Sbjct: 439 ----------------NDSFESWIAH---------GFMCNKIFLLFCKQGKVDAATSFLK 473
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
E + + ++ N+++ A+CR + A ++ + +G EPN T+ ++ G+ +N
Sbjct: 474 MMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNK 533
Query: 413 QSEKG 417
+
Sbjct: 534 DEQNA 538
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 9/172 (5%)
Query: 148 KLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLD 207
KL LP+ Y AL++ + + A + ++ + GL+ YNS+++ + G
Sbjct: 657 KLDLPA-YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAI 715
Query: 208 SLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
L +M GI CD +T++ ++ + + + + D G+V D ++ +G
Sbjct: 716 DLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSEL-LDLGIVPDEILHMVLVNG 774
Query: 268 YVKAGL---SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV 316
K G + K L ++K +V Y VI + GN ++ R+
Sbjct: 775 LSKKGQFLKASKMLEEMKKKDV----TPNVLLYSTVIAGHHREGNLNEAFRL 822
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 124/272 (45%), Gaps = 19/272 (6%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y L++ + A+ K E + ++M+ + L Y+S++N Y + GN ++ +
Sbjct: 135 PTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEV 194
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
E GI+ +++T+ L++ E + +V M+ RGV ++ V+ T GY
Sbjct: 195 FDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQV-RGVGINQIVFNTMIDGYC 253
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG----NKDD----VLRVWKRYK 321
+ + DKAL E+ M+ K D ACG N+ D +LR+ +
Sbjct: 254 RKNMVDKAL------EIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIM--IE 305
Query: 322 QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
+ ++ + Y +IS M A ++F E + N ++D Y ++G + +
Sbjct: 306 KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIRE 365
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
AE + + +G P++ ++ + G+ N +
Sbjct: 366 AERFKNEMEKKGLVPDIYSYAALVHGHCVNGK 397
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 147/334 (44%), Gaps = 49/334 (14%)
Query: 135 IEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
++QAA+ +C P+ + S + +++ Y + A ++ +M G+ + YNS++
Sbjct: 54 LKQAAT--SC-PDSVTPLSASV-VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLL 109
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--DR 252
+ Y + + ++ ++ ME +GI+ T++IL+ +AA D I K+ A+ E +
Sbjct: 110 DAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARD---ITKVEAVFEEMKSK 166
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD 312
+ D Y++ + Y +AG V R SEV +D + GN
Sbjct: 167 NLSGDVYFYSSVINAYCRAG------NVRRASEV----------FDECV------GN--- 201
Query: 313 VLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
++ Y +I+ K ME+AE + + + R + + + N +ID
Sbjct: 202 ----------GIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDG 251
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGT 432
YCR+ ++ KA + + G E +V T+ +A G + N+ + EA +++E G
Sbjct: 252 YCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMD---EAKNLLRIMIEKGV 308
Query: 433 RWKPSKECLAACLGYYKKERDIEGADYFIKLLTG 466
R P+ + + E D+ A + + G
Sbjct: 309 R--PNHVSYTTLISIHCNEGDMVEARRLFREMAG 340
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 112/253 (44%), Gaps = 36/253 (14%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
PS +A++ A + +AE + +++R+ GL +T YN+++ Y +TG+ K + ++
Sbjct: 276 PSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVS 335
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
EME+ G+ D+ T+S+L+ A A E ++ MEA V + V++ + Y
Sbjct: 336 EMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEAS-NVQPNSYVFSRILANYRDK 394
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
G K+ VL+ + + G + D Y
Sbjct: 395 GEWQKSFQVLKDMK--------------------SSGVQPD---------------RHFY 419
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I + K++ ++ A FE S + DI N LID +C+ G AE L + Q
Sbjct: 420 NVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQ 479
Query: 392 RGTEPNVRTWYLM 404
RG P + T+ +M
Sbjct: 480 RGYSPCITTYNIM 492
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 94/235 (40%), Gaps = 21/235 (8%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++ YA A E A I++++M + + ++ ++ Y G ++K ++ +M
Sbjct: 348 TYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDM 407
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKA 271
+ G+ D++ +++++ + +D +A E G+ D + T + K+
Sbjct: 408 KSSGVQPDRHFYNVMIDTFGKYN---CLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKS 464
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW--------KRYKQN 323
G D A + + + R Y IT Y N + W K Q
Sbjct: 465 GRHDMAEELFSEMQ--------QRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQG 516
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
L+ + Y ++ K A + E +S + N LI+AY +RGL
Sbjct: 517 LQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGL 571
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 114/259 (44%), Gaps = 11/259 (4%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS--- 208
P Y AL+ A A EKA +M +MR G ++Y+S++ Y N K+DS
Sbjct: 169 PLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQ-YLTRSN--KIDSPIL 225
Query: 209 --LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAAS 266
L E+E I+ D + + ++ + A D + +AM +++ G+ +
Sbjct: 226 QKLYAEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSN-GLNPKPSTLVAVIL 284
Query: 267 GYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN-KDDVLRVWKRYKQNLK 325
+G + +A A+ + + + +RAY+ ++ Y G+ KD V + K +K
Sbjct: 285 ALGNSGRTHEAEALFEEIRENGLEPR-TRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVK 343
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+ Y +I ESA + +E E+ N+ + + + ++ Y +G K+ +
Sbjct: 344 PDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQV 403
Query: 386 IYKAQLRGTEPNVRTWYLM 404
+ + G +P+ + +M
Sbjct: 404 LKDMKSSGVQPDRHFYNVM 422
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 117/281 (41%), Gaps = 38/281 (13%)
Query: 137 QAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
+A F+ + EK P+V Y L+ +AE + + MR+ G++ YN+MM
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGV 254
+ Y + + KK L EM G+ + TF IL+ + K + M A GV
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM-ASFGV 329
Query: 255 VLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVL 314
V + VY GY KAG SE L +H++ K ++L
Sbjct: 330 VPNIFVYNCLIDGYCKAG---------NLSEALSLHSEI---------------EKHEIL 365
Query: 315 RVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
V+ Y +I L D ME A+ + +E + + + N LID YC
Sbjct: 366 P---------DVFT--YSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYC 414
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+ G + KA + + +G EPN+ T+ + GY + + E
Sbjct: 415 KEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKME 455
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 4/172 (2%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D K + +A S + + + LP V Y L+ E+A+ ++Q+M+ +G
Sbjct: 340 IDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGF 399
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ + YN++++ Y + GN +K + +M EKGI+ + TFS L+ A E
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMG 459
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH-NKFS 294
+ M +G++ D Y G+ K G + +A + ++ + +H N F+
Sbjct: 460 LYTEM-VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFT 510
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 99/252 (39%), Gaps = 19/252 (7%)
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
M RG + Y ++++ + G++ K L EM EK I ++IL+ S
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY 297
+ + M + G++ + Y T GY K KAL + ++ ++
Sbjct: 244 ISEAESMFRTMR-NSGMLPNLYTYNTMMDGYCKIAHVKKALELYQE---MLGDGLLPNVV 299
Query: 298 DFVITQYAACGNKDDVLRVWKRY---------KQNLKVYNRGYICVISSLLKFDGMESAE 348
F I C K D + +++ N+ VYN C+I K + A
Sbjct: 300 TFGILIDGLC--KTDEMVSARKFLIDMASFGVVPNIFVYN----CLIDGYCKAGNLSEAL 353
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+ E E + D+ + LI C + +A+ L+ + + +G PN T+ + GY
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413
Query: 409 LQNNQSEKGVEA 420
+ EK +E
Sbjct: 414 CKEGNMEKAIEV 425
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 87/190 (45%), Gaps = 8/190 (4%)
Query: 111 KKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSA 168
KK F+ +D K +E+A + + EK P++ + L++ Y A
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
E A + +M +GL+ + Y ++++ +++ GN K+ L EM+E G+ + +T S L
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514
Query: 229 LSA-CAAASDGEGIDKIVAMMEAD----RGVVLDWTVYATAASGY-VKAGLSDKALAVLR 282
+ C + I +A D + LD ++Y + + G+S+ + V+R
Sbjct: 515 IDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQMCSLALSLFRGISEPCICVIR 574
Query: 283 KSEVLMMHNK 292
+++ +N+
Sbjct: 575 VTKLFATNNQ 584
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 138/297 (46%), Gaps = 12/297 (4%)
Query: 122 VAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIM--QQMR 179
VA+ ++++ K + AAS N + + P VY AC + E +M ++M
Sbjct: 1 VAVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKME 60
Query: 180 DRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG 238
+ G I YN ++NVY + G + K+ L M+ GI D+YT++ L++ C S
Sbjct: 61 EEGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLY 120
Query: 239 EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA-- 296
E + M++ G V D Y T Y K+ +A+ VLR+ EV N S +
Sbjct: 121 EEAAAVFEDMKS-MGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEV----NGCSPSIV 175
Query: 297 -YDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
Y+ +I+ YA G ++ + + + ++ +K+ Y ++S ++ ESA ++FEE
Sbjct: 176 TYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEM 235
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
+ +I N LI + RG + + + ++ P++ TW + + QN
Sbjct: 236 RTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQN 292
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 122/290 (42%), Gaps = 63/290 (21%)
Query: 136 EQAASYF------NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
E+AA+ F VP+K+ Y LL+ Y ++ ++A ++++M G +
Sbjct: 121 EEAAAVFEDMKSMGFVPDKV----TYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVT 176
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI----- 244
YNS+++ Y + G ++ L ++M E+GI D +T++ +LS E ++
Sbjct: 177 YNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMR 236
Query: 245 -------------VAMMEADRG----------------VVLDWTVYATAASGYVKAGLSD 275
+ M +RG V D + T + + + G+
Sbjct: 237 TAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDS 296
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-----KQNLKVYNRG 330
+ V ++ + + + Y+ +I+ Y+ CG+ D + ++KR +L YN
Sbjct: 297 EVSGVFKEMKRVGFVPE-RDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYN-- 353
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
V+++L + E +EKI E + +C PN L +C LLH
Sbjct: 354 --AVLAALARGGLWEQSEKILAEMQD-GMCK----PNEL--THC--SLLH 392
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 157/362 (43%), Gaps = 27/362 (7%)
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
++V G+ + VPE+ Y L++AY+ S ++A + ++M D G+
Sbjct: 296 SEVSGVFKEMKRVGFVPER----DTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLST 351
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
YN+++ + G +++ + ++ EM++ ++ T LL A A +G+ I +++A+ E
Sbjct: 352 YNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYA---NGKEIGRMLALAE 408
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN 309
V++ +A V L ++ + + FS + A G
Sbjct: 409 EICSGVIE--PHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGR 466
Query: 310 K------DDVLRVWKR--YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
+ +++L K + +L YN ++ + + E +E++ +E ++ +
Sbjct: 467 RQMVTKTNEILNFMKESGFTPSLATYNS----LMYMHSQSENFERSEEVLKEILAKGIKP 522
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
DI N +I AYCR G + +A + + + G P+V T+ Y ++ E EA+
Sbjct: 523 DIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFE---EAI 579
Query: 422 KKALVLLEAGTRWKPSKECLAACL-GYYKKERDIEGADYFIKLLTGKEIISADLQDRLLN 480
+++ G KP++ + + GY K R + + L IS + + RLL
Sbjct: 580 DVVCYMIKHGC--KPNQNTYNSVIDGYCKLNRRDDAIKFISSLHELDPHISREDECRLLE 637
Query: 481 NI 482
+
Sbjct: 638 RL 639
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 98/255 (38%), Gaps = 39/255 (15%)
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS 230
A ++ + G Y S++ G Y++ + +MEE+G T++++L+
Sbjct: 17 AASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILN 76
Query: 231 ACAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM 288
G +KI + E + G++ D Y T + + L ++A AV
Sbjct: 77 VYGKM--GMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDM---- 130
Query: 289 MHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAE 348
++ FV D V Y L VY K ++ A
Sbjct: 131 ------KSMGFV---------PDKV-----TYNTLLDVYG-----------KSRRIKEAI 159
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
++ E E I N LI AY R GLL +A L + RG + +V T+ M +G+
Sbjct: 160 EVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGF 219
Query: 409 LQNNQSEKGVEAMKK 423
++ + E + ++
Sbjct: 220 VRTGKDESAMRVFEE 234
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 135/306 (44%), Gaps = 43/306 (14%)
Query: 136 EQAASYFNCVPEKLKLPSV--YIALLNAYACAKSA---EKAEIIMQQMRDRGLVKKTIDY 190
E+A S FN + E P++ Y A+++A C K ++ +M+ G+ I +
Sbjct: 285 EEAISVFNSMKEYGLRPNLVTYNAVIDA--CGKGGMEFKQVAKFFDEMQRNGVQPDRITF 342
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA 250
NS++ V + G ++ +L EM + I+ D ++++ LL A + +I+A M
Sbjct: 343 NSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPV 402
Query: 251 DR----------------------------------GVVLDWTVYATAASGYVKAGLSDK 276
R G+ LD Y T S Y K G S++
Sbjct: 403 KRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEE 462
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVI 335
AL +LR+ + + K Y+ ++ Y G D+V +V+ K+ + N Y +I
Sbjct: 463 ALDILREMASVGI-KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
K + A +IF E++S L D+ + + LIDA C+ GL+ A +LI + G
Sbjct: 522 DGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGIS 581
Query: 396 PNVRTW 401
PNV T+
Sbjct: 582 PNVVTY 587
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 6/273 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHE 212
+ AL++AY + E+A + M++ GL + YN++++ + G +K++ E
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M+ G+ D+ TF+ LL+ C+ E + M +R + D Y T K G
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEM-TNRRIEQDVFSYNTLLDAICKGG 388
Query: 273 LSDKALAVLRKSEV-LMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-G 330
D A +L + V +M N S Y VI +A G D+ L ++ + +R
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVS--YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y ++S K E A I E S + D+ N L+ Y ++G + + + + +
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
PN+ T+ + GY + ++ +E ++
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFRE 539
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 111/259 (42%), Gaps = 38/259 (14%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
LD I K ++ A +P K +P+V Y +++ +A A ++A + +MR G+
Sbjct: 381 LDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ YN+++++Y + G ++ ++ EM GI D T++ LL + + K
Sbjct: 441 ALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKK 500
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ 303
+ M+ + V+ + Y+T GY K GL +A+ + R +
Sbjct: 501 VFTEMKREH-VLPNLLTYSTLIDGYSKGGLYKEAMEIFR--------------------E 539
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
+ + G + DV+ Y +I +L K + SA + +E + ++
Sbjct: 540 FKSAGLRADVVL---------------YSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 584
Query: 364 RIPNHLIDAYCRRGLLHKA 382
N +IDA+ R + ++
Sbjct: 585 VTYNSIIDAFGRSATMDRS 603
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 259 TVYATAA--SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKD----D 312
TVYA +A S Y ++GL ++A++V + + Y+ VI ACG
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLV-TYNAVID---ACGKGGMEFKQ 322
Query: 313 VLRVWKRYKQNLKVYNRGYICVISSLLKFDGM-ESAEKIFEEWESRNLCHDIRIPNHLID 371
V + + ++N +R + ++ G+ E+A +F+E +R + D+ N L+D
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
A C+ G + A ++ + ++ PNV ++ + G+
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGF 419
>gi|224106481|ref|XP_002314181.1| predicted protein [Populus trichocarpa]
gi|222850589|gb|EEE88136.1| predicted protein [Populus trichocarpa]
Length = 525
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 157/357 (43%), Gaps = 12/357 (3%)
Query: 71 LDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIA 130
W+ EG P+ + I + R + AL++ W+ ++ + L D + L+
Sbjct: 76 FQSWMGEGFPIHRGDVFHTINRLRKLRLNKRALEVMEWVVRERPYRLKELDYSYLLEFTT 135
Query: 131 KVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEI-----IMQQMRDRGLVK 185
K GI F VP + + +Y L+ +C EK I M++MR++G
Sbjct: 136 KHHGISHGEKLFLHVPSEFQNELLYNNLV--ISCL---EKGVIRLSLDYMKKMREQGHPI 190
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
+ +N ++ ++ G+ K + ++ +M + T++IL+ A + +G+ K+
Sbjct: 191 SYLIFNRLIILHSSPGSRKMIPKILAQMRADKVVPHVSTYNILMKIEANEHNIDGLVKVF 250
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
M+ + V + + A+ + A L A A + E + +S D +I Y
Sbjct: 251 NDMKRFK-VEPNEVSFCILATAHAAARLYTVAEAYVEAVEKSCSGDNWS-TLDVLIILYG 308
Query: 306 ACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
G + ++ R W + V ++ Y+ I + K + AE+++ E +S +
Sbjct: 309 HLGKEKELERTWGIVLELPHVRSKSYMLAIEAYGKIGQLSRAEELWLEMKSIHGLRSTEQ 368
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
N ++ YC+ GL+ KA + ++ G + N T+ +A G L+ N E+ ++ ++
Sbjct: 369 FNSMLSVYCKHGLIKKATGNFREMEINGCKANSITFRHLALGCLKANLVEEALKTLE 425
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 159/358 (44%), Gaps = 9/358 (2%)
Query: 56 MLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNF 115
+LS +S LL++W + + +E ++++ + ALQ WM ++ +
Sbjct: 137 ILSAPSMSGNSTALLLEKWSHQ--LVGLEDFPYLLRELGNRGEWERALQGYEWMVQQGHL 194
Query: 116 VLTPADVA-IRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAE 172
+ +A I + + ++ +E A FN + +VY A+++AY + +A
Sbjct: 195 RSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREAL 254
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
+ Q M+ G I YN++++ + G + KK + EM+++G++ D+ TF+ L++
Sbjct: 255 KVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAV 314
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
C+ S E ++ A M+ RG+ D Y T K G + A +++ + +
Sbjct: 315 CSRGSLWEDSQRVFAEMQ-RRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISP 373
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKI 350
Y +I Y G ++ + ++ K++ +R Y +I K + A
Sbjct: 374 NVV-TYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTA 432
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
++ E L D+ N LIDAY ++G A L K + G PNV T+ + Y
Sbjct: 433 CKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAY 490
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 111/270 (41%), Gaps = 39/270 (14%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++A E A IM MR + + + Y++M++ Y + G +++ L H+M
Sbjct: 342 TYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDM 401
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+E G+ D+ +++ L+ Y K G
Sbjct: 402 KESGVRPDRVSYNTLIDI------------------------------------YAKLGR 425
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYI 332
D AL + E + + Y+ +I Y G D ++ + K V N Y
Sbjct: 426 FDDALTACKDMERVGLKADVV-TYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYS 484
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I + K + A IF E++ L D+ + + LID+ C+ GL+ A L+ +
Sbjct: 485 ALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQA 544
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
G +PN+ T+ + Y +N Q + VEA K
Sbjct: 545 GIQPNIVTYNSLIDAYGRNGQVDN-VEAAK 573
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 117/281 (41%), Gaps = 38/281 (13%)
Query: 137 QAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
+A F+ + EK P+V Y L+ +AE + + MR+ G++ YN+MM
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGV 254
+ Y + + KK L EM G+ + TF IL+ + K + M A GV
Sbjct: 271 DGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM-ASFGV 329
Query: 255 VLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVL 314
V + VY GY KAG SE L +H++ K ++L
Sbjct: 330 VPNIFVYNCLIDGYCKAG---------NLSEALSLHSEI---------------EKHEIL 365
Query: 315 RVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
V+ Y +I L D ME A+ + +E + + + N LID YC
Sbjct: 366 P---------DVFT--YSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYC 414
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+ G + KA + + +G EPN+ T+ + GY + + E
Sbjct: 415 KEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKME 455
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 122/293 (41%), Gaps = 37/293 (12%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D K + +A S + + + LP V Y L+ E+A+ ++Q+M+ +G
Sbjct: 340 IDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGF 399
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ + YN++++ Y + GN +K + +M EKGI+ + TFS L+ A E
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMG 459
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH-NKFSRAYDFVIT 302
+ M +G++ D Y G+ K G + +A + ++ + +H N F+ + +I
Sbjct: 460 LYTEM-VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSC--LID 516
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
G D ++++ L G ++ E + R+LC
Sbjct: 517 GLCKDGRISDAIKLF---------------------LAKTGTDTTGSKTNELD-RSLCS- 553
Query: 363 IRIPNH-----LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
PNH LI C G + KA + G P+V T ++ G+ +
Sbjct: 554 ---PNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFR 603
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 98/252 (38%), Gaps = 19/252 (7%)
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
M RG + Y ++++ + G++ K L EM EK I ++IL+ S
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY 297
+ + M + G++ + Y T GY K KAL + + ++
Sbjct: 244 ISEAESMFRTMR-NSGMLPNLYTYNTMMDGYCKIAHVKKALELYXE---MLGDGLLPNVV 299
Query: 298 DFVITQYAACGNKDDVLRVWKRY---------KQNLKVYNRGYICVISSLLKFDGMESAE 348
F I C K D + +++ N+ VYN C+I K + A
Sbjct: 300 TFGILIDGLC--KTDEMVSARKFLIDMASFGVVPNIFVYN----CLIDGYCKAGNLSEAL 353
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+ E E + D+ + LI C + +A+ L+ + + +G PN T+ + GY
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413
Query: 409 LQNNQSEKGVEA 420
+ EK +E
Sbjct: 414 CKEGNMEKAIEV 425
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
Query: 111 KKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSA 168
KK F+ +D K +E+A + + EK P++ + L++ Y A
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
E A + +M +GL+ + Y ++++ +++ GN K+ L EM+E G+ + +T S L
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514
Query: 229 LSACAAASDGEGIDKI 244
+ DG D I
Sbjct: 515 ID--GLCKDGRISDAI 528
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 126/294 (42%), Gaps = 26/294 (8%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ L+NA +AE + +M RG++ TI YNSM++ + + + + + M
Sbjct: 321 FSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMA 380
Query: 215 EKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
KG D TFSIL+ C A +G+ + M + RG+V + Y T G+ + G
Sbjct: 381 TKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEM--SRRGLVANTITYTTLIHGFCQLGN 438
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN---KD--DVLRVWKRYKQNLKVYN 328
+ AL +L++ ++ C N KD ++ +V ++ K +L +
Sbjct: 439 LNAALDLLQE---MISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASH 495
Query: 329 ---------RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
+ Y +I L+ AE+++EE R L D N +ID C++ L
Sbjct: 496 PFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRL 555
Query: 380 HKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTR 433
+A + +G P+V T+ + GY + + G+E V E G R
Sbjct: 556 DEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLE------VFCEMGRR 603
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 113/281 (40%), Gaps = 20/281 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y A+++ A+ + +M+++G+ YN M+N + +G + + L+ EM
Sbjct: 250 IYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREM 309
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E+ + D TFS+L++A +++ M RG++ + Y + G+ K
Sbjct: 310 FERKMSPDVVTFSVLINALVKEGKFFEAEELYNEM-LPRGIIPNTITYNSMIDGFSKQNR 368
Query: 274 SDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR- 329
D A + LM S + +I Y DD +++ + V N
Sbjct: 369 LDAA----ERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTI 424
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +I + + +A + +E S +C ++ N L+D C G L A +
Sbjct: 425 TYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVM 484
Query: 390 Q-----------LRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
Q EP+V+T+ ++ G + + + E
Sbjct: 485 QKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEE 525
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+AE + ++M RGLV TI YNS+++ + + + M KG D TF+ L+
Sbjct: 522 EAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLI 581
Query: 230 SA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
+ C G+G++ M RG+V + Y T G+ + G + AL + ++
Sbjct: 582 NGYCKVGRVGDGLEVFCEM--GRRGIVANAITYRTLIHGFCQVGNINGALDIFQE 634
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/239 (18%), Positives = 105/239 (43%), Gaps = 4/239 (1%)
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
I + ++MN + G + +L+ M E G+ ++ T+ ++ D ++
Sbjct: 177 VIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 236
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYA 305
ME + + +Y+ G K G A + + E + N F+ Y+ +I +
Sbjct: 237 KMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFT--YNCMINGFC 294
Query: 306 ACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
+ G + R+ + +++ + + +I++L+K AE+++ E R + +
Sbjct: 295 SSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTI 354
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
N +ID + ++ L AE + Y +G P+V T+ ++ GY + + G++ + +
Sbjct: 355 TYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHE 413
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 68/347 (19%), Positives = 140/347 (40%), Gaps = 35/347 (10%)
Query: 80 PLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAA 139
P ++ I+IK F + AL +TK F + + L + + +A
Sbjct: 108 PCNIYSFTILIKCFCSCSKLPFALSTFGKITKLG-FHPSLVTFSTLLHGLCVEDRVSEAL 166
Query: 140 SYFN--CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVY 197
+F+ C P + + L+N +A ++ +M + GL I Y ++++
Sbjct: 167 HFFHQICKPNVI----AFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 222
Query: 198 YQTGNYKKLDSLMHEMEEKG-IDCDKYTFSILLSACAAASDGEGID--KIVAMMEADRGV 254
+ G+ +L+ +MEE I + +S ++ DG D + + M+ ++G+
Sbjct: 223 CKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDG--LWKDGRQTDAQNLFSEMQ-EKGI 279
Query: 255 VLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVL 314
+ Y +G+ +G +A +LR+ F R + ++ N L
Sbjct: 280 SPNLFTYNCMINGFCSSGRWSEAQRLLRE--------MFERKMSPDVVTFSVLIN---AL 328
Query: 315 RVWKRYKQNLKVYN----RGYI-------CVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
++ + ++YN RG I +I K + +++AE++F ++ D+
Sbjct: 329 VKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDV 388
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+ LID YC + L+++ RG N T+ + G+ Q
Sbjct: 389 ITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQ 435
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 32/318 (10%)
Query: 137 QAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
+A + FN + + P + Y +LLNAY + EKA + +M+ + YN+++
Sbjct: 241 EALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALI 300
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--DR 252
+ Y G K+ L+HEME+ GI D + S LL+AC I +I ++EA R
Sbjct: 301 DAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQ---ITRIETILEAARSR 357
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAV---LRKSEVLMMHNKFSRAYDFVITQYAACGN 309
G+ L+ Y + Y+ G +KAL + +R+S V + Y+ +I+ + G
Sbjct: 358 GIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNV----KPDAVTYNILISGSSKLG- 412
Query: 310 KDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
+Y ++L+ + +SS K + AE F + D+ L
Sbjct: 413 ---------KYTESLRFFEDMVDSKVSS-TKEGKLSEAESTFSSMKKSGCFPDVLTYTTL 462
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV---EAMKKALV 426
I AY G +A L + ++ G P+ + + + + E+ + E MKK +
Sbjct: 463 IQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSI 522
Query: 427 LLEAGTRWKPSKECLAAC 444
L + + E +A+C
Sbjct: 523 PLNQKSYF----EIIASC 536
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 135/337 (40%), Gaps = 56/337 (16%)
Query: 109 MTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYF------NCVPEKLKLPSVYIALLNAY 162
M + N+ + + L A+ ++QA F C P+ +Y +L++A+
Sbjct: 1 MKNQDNYCARNDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPD----ADIYNSLIHAH 56
Query: 163 ACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDK 222
+ A A IM+ M + YN+++N GN+KK L +M E G+ D
Sbjct: 57 SRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDL 116
Query: 223 YTFSILLSA-------------------CAAASD-----------------GEGIDKIVA 246
T +I+LSA SD GE I+ +
Sbjct: 117 VTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNS 176
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQ 303
M E D Y + Y G + A+ LM+ AY+ ++
Sbjct: 177 MRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFD----LMVAEGVKPNIVAYNSLLGA 232
Query: 304 YAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
YA+ G + L ++ K+N L+ Y ++++ + E A ++F + + +N C
Sbjct: 233 YASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMK-KNSCKP 291
Query: 363 IRIP-NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
++ N LIDAY G+L +A L+++ + G +P+V
Sbjct: 292 NKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDV 328
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 101/255 (39%), Gaps = 26/255 (10%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
LL A + + E I++ R RG+ T+ YNS + Y G+Y+K L M E
Sbjct: 334 LLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESN 393
Query: 218 IDCDKYTFSILLSACA-------------------AASDGEG----IDKIVAMMEADRGV 254
+ D T++IL+S + +S EG + + M+ G
Sbjct: 394 VKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFSSMKKS-GC 452
Query: 255 VLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVL 314
D Y T Y G +A + ++ EV + + ++ + G + VL
Sbjct: 453 FPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPD-AIICSSLMEAFNKGGEPERVL 511
Query: 315 RVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAY 373
++ + K+ ++ + + Y +I+S ++A ++ E +S + NH+++
Sbjct: 512 QLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFL 571
Query: 374 CRRGLLHKAETLIYK 388
+ G L YK
Sbjct: 572 GKCGKTENMMKLFYK 586
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 178/397 (44%), Gaps = 21/397 (5%)
Query: 55 RMLSPMGDPNDSMVPLLDQWVE--EGRP----LDMEQLRI----IIKKFRLYKRFSHALQ 104
R+L + DP ++ + + +E E +P +E L + I+K YK+ AL+
Sbjct: 89 RILQTLIDPTFNLAQIDELLLELFEQQPGESDFSVESLSLDVLGIVKGLGFYKKCDTALR 148
Query: 105 ISMWMT--KKSNFVLTPADVAIRLDLIAKVQGIEQAASYF-NCVPEKLKLPS-VYIALLN 160
+ W+ K+S +L + +A+ + ++ K + AAS N + + Y +++
Sbjct: 149 VFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMIT 208
Query: 161 AYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEEKGID 219
A+ +A ++ ++M + G I YN ++NVY + G + K+ L+ M+ GI
Sbjct: 209 AFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIA 268
Query: 220 CDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALA 279
D YT++ L+S C + E ++ M+ G D Y Y K+ S +A+
Sbjct: 269 PDSYTYNTLISCCRRGNLYEEAAGVLKEMKL-AGFSPDKVTYNALLDVYGKSRRSKEAME 327
Query: 280 VLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSL 338
VL++ E Y+ +I+ YA G +D L + + ++ +K Y ++S
Sbjct: 328 VLQEMEGNGCPPSIV-TYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGF 386
Query: 339 LKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
K ++A +IFEE + +I N LI + RG + + + P++
Sbjct: 387 EKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDI 446
Query: 399 RTWYLMATGYLQNNQSEK--GV-EAMKKALVLLEAGT 432
TW + + + QN + GV + MK+A + E T
Sbjct: 447 VTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDT 483
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 135/302 (44%), Gaps = 36/302 (11%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
E+A ++++M+ G + YN++++VY ++ K+ ++ EME G T++ L
Sbjct: 288 EEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSL 347
Query: 229 LSACAAASDGEGIDKI-VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
+S A A DG D + + ++G+ D Y T SG+ KAG A+ + +
Sbjct: 348 IS--AYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEE---- 401
Query: 288 MMHNKFSR----AYDFVITQYAACGNKDDVLRVWKRYK-----QNLKVYNRGYICVISSL 338
M N+ + ++ +I + G ++++V++ K ++ +N + S+
Sbjct: 402 -MRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWN-----TLLSV 455
Query: 339 LKFDGMES-AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR-GTEP 396
+GM+S +F+E + + N LI +Y R G +A +YK L G P
Sbjct: 456 FGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQA-MAVYKRMLEAGVNP 514
Query: 397 NVRTWYLMATGYLQNN---QSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERD 453
++ ++ + + QSEK + MK R KP++ + L Y ++
Sbjct: 515 DLSSYNAVLAALARGGLWKQSEKVLAEMKDG--------RCKPNELTYCSLLHAYANGKE 566
Query: 454 IE 455
IE
Sbjct: 567 IE 568
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 125/293 (42%), Gaps = 7/293 (2%)
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
R +L + G+ + P+K+ Y ALL+ Y ++ +++A ++Q+M G
Sbjct: 283 RGNLYEEAAGVLKEMKLAGFSPDKV----TYNALLDVYGKSRRSKEAMEVLQEMEGNGCP 338
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI 244
+ YNS+++ Y + G + L ++M EKGI D +T++ LLS A + +I
Sbjct: 339 PSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQI 398
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
M + G + + + G + + V + ++ +++ +
Sbjct: 399 FEEMR-NEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIV-TWNTLLSVF 456
Query: 305 AACGNKDDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
G +V V+K K+ V R + +ISS + + A +++ + D+
Sbjct: 457 GQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDL 516
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
N ++ A R GL ++E ++ + + +PN T+ + Y + E+
Sbjct: 517 SSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIER 569
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 172/403 (42%), Gaps = 43/403 (10%)
Query: 89 IIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEK 148
++K F K F + I W T S F D ++V G+ + VPE+
Sbjct: 430 MMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMD--------SEVSGVFKEMKRAGFVPER 481
Query: 149 LKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
+ L+++Y+ S ++A + ++M + G+ YN+++ + G +K+ +
Sbjct: 482 ----DTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEK 537
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA-------DRGVVLDWTVY 261
++ EM++ ++ T+ LL A A +G+ I+++ A+ E R V+L V
Sbjct: 538 VLAEMKDGRCKPNELTYCSLLHAYA---NGKEIERMCALAEEIYSGIIEPRAVLLKTLVL 594
Query: 262 ATAASGYVKAGLSDKALAVLRK---SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK 318
+ + +++A LR+ S + N Y + +++L K
Sbjct: 595 VNSKCDLLME--TERAFLELRQRGFSPDITTLNAMVSIYG----RRQMVAKANEILDCMK 648
Query: 319 R--YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRR 376
R + +L YN ++ + E +E+I E ++ + DI N +I AYCR
Sbjct: 649 RGGFTPSLTTYNS----LMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRN 704
Query: 377 GLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKP 436
G + A ++ + + G P++ T+ Y ++ VEA+ +++ G KP
Sbjct: 705 GRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMF---VEAIDVVCYMIKHGC--KP 759
Query: 437 SKECLAACLGYYKKERDIEGADYFIKLLTGKEI-ISADLQDRL 478
++ + + +Y K + A F+ L + IS D + RL
Sbjct: 760 NQSTYNSIVDWYCKLNRRDEASMFVNNLRKLDPHISMDEECRL 802
>gi|15229734|ref|NP_187743.1| Pentatricopeptide repeat-containing protein-like protein
[Arabidopsis thaliana]
gi|12322893|gb|AAG51431.1|AC008153_4 hypothetical protein; 1030-2613 [Arabidopsis thaliana]
gi|332641512|gb|AEE75033.1| Pentatricopeptide repeat-containing protein-like protein
[Arabidopsis thaliana]
Length = 359
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 91 KKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLK 150
+K + R AL++S WM + L P D + R LI V G+E+A YF +PE L+
Sbjct: 48 QKAEITARLHQALEVSDWMIEHKICCLVPEDFSARFQLIENVLGLEEAEKYFESIPENLR 107
Query: 151 LPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLM 210
S+Y ALL +Y AK +EK + DR + I + ++ + G K+D +
Sbjct: 108 GESLYTALLRSY--AKRSEKKYL------DRA-SRIHIQEDERISSF---GTRDKVDESL 155
Query: 211 HEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
EM+E ID D+ T + L AAASD +++ +A
Sbjct: 156 REMKESNIDLDRLTVNKALRVYAAASDVAAMERFLA 191
>gi|255584236|ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527393|gb|EEF29534.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 159/383 (41%), Gaps = 20/383 (5%)
Query: 59 PMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLT 118
P G+P + W+ EG P+ + I + R K AL++ W+ ++ +
Sbjct: 63 PRGEP---IGLAFQSWMREGFPIHRGDVFHAINRLRKLKLNKRALEVMEWVIRERPYRPK 119
Query: 119 PADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVY----IALLNAYACAKSAEKAEII 174
D + L+ K+ GI F +P + + +Y IA L S E
Sbjct: 120 ELDYSYLLEFTTKLHGISHGEKLFTRIPTEFQNELLYNNLVIACLEKGVIRLSLE----Y 175
Query: 175 MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAA 234
M++MR+ G + +N ++ ++ G K + ++ +M+ + T++IL+ A
Sbjct: 176 MKKMRELGHPISHLIFNRLIILHSSPGRRKMIPKILTQMKADKVVRHVSTYNILMKIEAN 235
Query: 235 ASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
+ EG+ K+ M+ V + + A + A L A A + E + +S
Sbjct: 236 EHNVEGLIKVFGEMKRLE-VEPNEVSFCILAIAHAVARLYTVAEAYVEAVEKSYTGDNWS 294
Query: 295 RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
D +I Y + R+W K+ V ++ YI I + + + AE+++ E
Sbjct: 295 -TLDVLIILYGYLRKGKKLDRIWGTVKELPHVRSKSYILAIEAFGRIGQLGRAEELWLEM 353
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
+S N ++ YC+ GL+ KA + + G +PN T+ +A G L+
Sbjct: 354 KSLKGLKSTEQFNSMLSIYCKCGLVKKATDIFREMDRNGCKPNAITFRHLALGCLK---- 409
Query: 415 EKGVEAMKKALVLLEAGTRWKPS 437
E +++AL LE G + S
Sbjct: 410 ---AELVEEALKTLEMGMDFTTS 429
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 18/303 (5%)
Query: 115 FVLTPADVAIRLDLIAKV---QGIEQAASY-FNCVPEKLKLPSVYI--ALLNAYACAKSA 168
F +P D+I KV +G+ + A Y F+ + + ++PS+ +LLN
Sbjct: 152 FAFSPT----VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGET 207
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
A + QQM G+V + M+N + + G + + +ME G++ + T+ L
Sbjct: 208 HTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSL 267
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR--KSEV 286
++ + D E ++ M +++GV + Y GY K D+A VLR + E
Sbjct: 268 INGYVSLGDVEAAKGVLKFM-SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEA 326
Query: 287 LMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC--VISSLLKFDGM 344
++ ++ RAY +I Y G DD +R+ + L + +IC +I+ K +
Sbjct: 327 ALVPDE--RAYGVLIDGYCRTGKIDDAVRLLDEMLR-LGLKTNLFICNSLINGYCKRGEI 383
Query: 345 ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
AE + NL D N L+D YCR G +A L K G EP V T+ +
Sbjct: 384 HEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTL 443
Query: 405 ATG 407
G
Sbjct: 444 LKG 446
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 19/292 (6%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y AL++ + +KA +M + GL I ++M++ Y+ G + + LM +M
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL--DWTVYATAASGYVKAG 272
+ G D F L S A+ I KI ++ L + VY A +G K G
Sbjct: 675 DHGFFPDHECF--LKSDIRYAA----IQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTG 728
Query: 273 LSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN- 328
D A R+ ++ F + Y +I Y+A GN D+ R+ + V N
Sbjct: 729 KVDDA----RRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNI 784
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y +I+ L K + ++ A+++F + + L ++ N LID YC+ G + A L K
Sbjct: 785 VTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDK 844
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKEC 440
G P+V T+ + G ++ E+ ++ + + +++AG K + C
Sbjct: 845 MIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQ---MIKAGVDSKLIEYC 893
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 116/292 (39%), Gaps = 16/292 (5%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y LL+ Y +A + +M G+ + YN+++ + G + + H M
Sbjct: 405 YNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM 464
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
++G+ D+ +S LL + EG + + A RG + T SG K G
Sbjct: 465 KRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA-RGFTKSRITFNTMISGLCKMGKM 523
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNR 329
+A + K + L Y +I Y N +V ++ ++++YN
Sbjct: 524 VEAEEIFDKMKDLGCSPD-GITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNS 582
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
+IS L K + + E R L +I LID +C+ G+L KA + ++
Sbjct: 583 ----LISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEM 638
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECL 441
G N+ M +G + + ++ M+K +++ G + P EC
Sbjct: 639 TENGLSANIIICSTMVSGLYRLGRIDEANLLMQK---MVDHG--FFPDHECF 685
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/190 (19%), Positives = 90/190 (47%), Gaps = 5/190 (2%)
Query: 98 RFSHALQISMWMTKKSNFVLTPADVAIRLDL--IAKVQGIEQAASYFNCVPEKLKLPS-- 153
R++ +I+ + + L P ++ + + + K ++ A +F+ + K +P
Sbjct: 691 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 750
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++ Y+ A + ++A + +M RGLV + YN+++N ++ N + L H++
Sbjct: 751 TYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKL 810
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+KG+ + T++ L+ + + K+ M + G+ Y+ +G K G
Sbjct: 811 HQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM-IEEGISPSVVTYSALINGLCKHGD 869
Query: 274 SDKALAVLRK 283
++++ +L +
Sbjct: 870 IERSMKLLNQ 879
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Query: 151 LPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
+P++ Y AL+N +++ ++A+ + ++ +GL + YN++++ Y + GN
Sbjct: 781 VPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFK 840
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
L +M E+GI T+S L++ D E K++ M GV Y T GY
Sbjct: 841 LKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQM-IKAGVDSKLIEYCTLVQGY 899
Query: 269 VKAG 272
+++G
Sbjct: 900 IRSG 903
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEW 354
+D ++ Y G + L V+ + ++ + R ++++L+K +A ++++
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY--LQNN 412
+ D+ + + +++A+C+ G + +A + K + G EPN+ T++ + GY L +
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277
Query: 413 QSEKGV 418
++ KGV
Sbjct: 278 EAAKGV 283
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 48/256 (18%), Positives = 109/256 (42%), Gaps = 20/256 (7%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
++A ++MQ+M D G D+ + + +K+ + E + + + ++I
Sbjct: 664 DEANLLMQKMVDHGFFP---DHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIA 720
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL- 287
++ + + +M+ +G V D Y T GY AG D+A + + E+L
Sbjct: 721 IAGLCKTGKVDDARRFFSMLSL-KGFVPDNFTYCTLIHGYSAAGNVDEAFRL--RDEMLR 777
Query: 288 --MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNRGYICVISSLLK 340
++ N + Y+ +I N D R++ + Q N+ YN +I K
Sbjct: 778 RGLVPNIVT--YNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNT----LIDGYCK 831
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
M++A K+ ++ + + + LI+ C+ G + ++ L+ + G + +
Sbjct: 832 IGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIE 891
Query: 401 WYLMATGYLQNNQSEK 416
+ + GY+++ + +K
Sbjct: 892 YCTLVQGYIRSGEMQK 907
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 18/303 (5%)
Query: 115 FVLTPADVAIRLDLIAKV---QGIEQAASY-FNCVPEKLKLPSVYI--ALLNAYACAKSA 168
F +P D+I KV +G+ + A Y F+ + + ++PS+ +LLN
Sbjct: 118 FAFSPT----VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGET 173
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
A + QQM G+V + M+N + + G + + +ME G++ + T+ L
Sbjct: 174 HTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSL 233
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR--KSEV 286
++ + D E ++ M +++GV + Y GY K D+A VLR + E
Sbjct: 234 INGYVSLGDVEAAKGVLKFM-SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEA 292
Query: 287 LMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC--VISSLLKFDGM 344
++ ++ RAY +I Y G DD +R+ + L + +IC +I+ K +
Sbjct: 293 ALVPDE--RAYGVLIDGYCRTGKIDDAVRLLDEMLR-LGLKTNLFICNSLINGYCKRGEI 349
Query: 345 ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
AE + NL D N L+D YCR G +A L K G EP V T+ +
Sbjct: 350 HEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTL 409
Query: 405 ATG 407
G
Sbjct: 410 LKG 412
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 110/251 (43%), Gaps = 16/251 (6%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y AL++ + +KA +M + GL I ++M++ Y+ G + + LM +M
Sbjct: 581 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 640
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL--DWTVYATAASGYVKAG 272
+ G D F L S A+ I KI ++ L + VY A +G K G
Sbjct: 641 DHGFFPDHECF--LKSDIRYAA----IQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTG 694
Query: 273 LSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN- 328
D A R+ ++ F + Y +I Y+A GN D+ R+ + V N
Sbjct: 695 KVDDA----RRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNI 750
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y +I+ L K + ++ A+++F + + L ++ N LID YC+ G + A L K
Sbjct: 751 VTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDK 810
Query: 389 AQLRGTEPNVR 399
G P+++
Sbjct: 811 MIEEGISPSIQ 821
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 116/292 (39%), Gaps = 16/292 (5%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y LL+ Y +A + +M G+ + YN+++ + G + + H M
Sbjct: 371 YNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM 430
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
++G+ D+ +S LL + EG + + A RG + T SG K G
Sbjct: 431 KRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA-RGFTKSRITFNTMISGLCKMGKM 489
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNR 329
+A + K + L Y +I Y N +V ++ ++++YN
Sbjct: 490 VEAEEIFDKMKDLGCSPD-GITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNS 548
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
+IS L K + + E R L +I LID +C+ G+L KA + ++
Sbjct: 549 ----LISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEM 604
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECL 441
G N+ M +G + + ++ M+K +++ G + P EC
Sbjct: 605 TENGLSANIIICSTMVSGLYRLGRIDEANLLMQK---MVDHG--FFPDHECF 651
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 134/332 (40%), Gaps = 23/332 (6%)
Query: 118 TPADVAIR--LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEI 173
+P + R +D K + QA + + PS+ Y +L++ ++ +
Sbjct: 505 SPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTD 564
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
++ +M RGL + Y ++++ + + G K S EM E G+ + S ++S
Sbjct: 565 LLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLY 624
Query: 234 AASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
ID+ +M+ D G D + + Y A + A ++ + ++ N
Sbjct: 625 RLGR---IDEANLLMQKMVDHGFFPDHECFLKSDIRY--AAIQKIADSLDESCKTFLLPN 679
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY---NRGYICVISSLLKFDGMESAE 348
Y+ I G DD R + +LK + N Y +I ++ A
Sbjct: 680 NI--VYNIAIAGLCKTGKVDDARRFFSML--SLKGFVPDNFTYCTLIHGYSAAGNVDEAF 735
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
++ +E R L +I N LI+ C+ + +A+ L +K +G PNV T+ + GY
Sbjct: 736 RLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGY 795
Query: 409 LQNNQSEKGVEAMKKALVLLEAGTRWKPSKEC 440
+ + + K ++E G PS +C
Sbjct: 796 CKIGNMDAAFKLKDK---MIEEGI--SPSIQC 822
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 98 RFSHALQISMWMTKKSNFVLTPADVAIRLDL--IAKVQGIEQAASYFNCVPEKLKLPS-- 153
R++ +I+ + + L P ++ + + + K ++ A +F+ + K +P
Sbjct: 657 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 716
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++ Y+ A + ++A + +M RGLV + YN+++N ++ N + L H++
Sbjct: 717 TYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKL 776
Query: 214 EEKGIDCDKYTFSILLSA 231
+KG+ + T++ L+
Sbjct: 777 HQKGLFPNVVTYNTLIDG 794
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEW 354
+D ++ Y G + L V+ + ++ + R ++++L+K +A ++++
Sbjct: 124 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 183
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY--LQNN 412
+ D+ + + +++A+C+ G + +A + K + G EPN+ T++ + GY L +
Sbjct: 184 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 243
Query: 413 QSEKGV 418
++ KGV
Sbjct: 244 EAAKGV 249
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 126/282 (44%), Gaps = 22/282 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y AL+NA+ +AE + +M RG++ TI Y+SM++ + + + + + M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
KG + TF+ L+ C A +G++ + M E G+V D T Y T G+ G
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET--GLVADTTTYNTLIHGFYLVG 444
Query: 273 LSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWK---RYKQNLKV 326
+ AL +L++ M+ + D ++ G D L ++K + K++L
Sbjct: 445 DLNAALDLLQE----MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Query: 327 YN---------RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
+ + Y +IS L+ AE+++EE R + D + +ID C++
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
L +A + + PNV T+ + GY + + + G+E
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/276 (18%), Positives = 113/276 (40%), Gaps = 12/276 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+ LL+ +A + QM + + + ++MN + G + +L+ M
Sbjct: 151 TFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG- 272
E G+ + T+ ++ D ++ ME ++ + +Y+ K G
Sbjct: 211 MEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGR 270
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVY 327
SD E + + F+ Y+ +I + + G D ++ ++ ++ Y
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFT--YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY 328
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
N +I++ +K AE++++E R + + + +ID +C++ L AE + Y
Sbjct: 329 NA----LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFY 384
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+G PN+ T+ + GY + + G+E + +
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+AE + ++M RG+V TI Y+SM++ + + + M K + TF+ L+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Query: 230 SA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
+ C A +G++ M RG+V + Y T G+ K G + AL + ++
Sbjct: 589 NGYCKAGRVDDGLELFCEM--GRRGIVANAITYITLICGFRKVGNINGALDIFQE 641
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 25/182 (13%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
L+ + EG+ L+ E+L Y+ H + +T S +D +
Sbjct: 517 LISGLINEGKFLEAEEL---------YEEMPHRGIVPDTITYSS-----------MIDGL 556
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
K +++A F+ + K P+V + L+N Y A + + +M RG+V
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
I Y +++ + + GN + EM G+ D T +L+ + E + + VAM
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK---EELKRAVAM 673
Query: 248 ME 249
+E
Sbjct: 674 LE 675
>gi|302819880|ref|XP_002991609.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
gi|300140642|gb|EFJ07363.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
Length = 356
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 121/249 (48%), Gaps = 11/249 (4%)
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
+++ RG+ YN ++ + + G+ K++ ++ EM + + D ++F+ L++A A +
Sbjct: 88 EIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAMSR 147
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA 296
E ++ + M+A GV+ D Y T + ++ + +A+ + + V F
Sbjct: 148 KPERGLQVFSNMKA-AGVLPDIVTYTTLIQMFSRSSMHKEAIEMFEEMVVNKCQPDFF-V 205
Query: 297 YDFVITQYAACGNKDDVLRVWKR-----YKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
Y +++ Y G D L ++ R ++ N+ Y +IS+ L +E + K F
Sbjct: 206 YSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYT----SLISAHLHKGLLEESRKHF 261
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
+ E+ D+ + N +IDAY + G+++ A L+++ +G PN ++ ++ G+L
Sbjct: 262 SQMEAYGCRADVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVCPNRASYAIIVEGFLHA 321
Query: 412 NQSEKGVEA 420
E+ + A
Sbjct: 322 GHVEEALAA 330
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 11/231 (4%)
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
YN+M+ YYQ K + H+M +GID D+ T+ IL+S + +G ID++ ++
Sbjct: 33 YNAMIAAYYQAKRPKDAWDVYHQMLAEGIDPDEVTYDILVS--GSGKNGYPIDRLFLEIK 90
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAA 306
+ RGV L Y + K G DK V+R+ M+ + +++ +I YA
Sbjct: 91 S-RGVALTLRSYNVVICAFTKEGSIDKVEEVIRE----MIRQELRPDLFSFNALIAAYAM 145
Query: 307 CGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
+ L+V+ K + + Y +I + + A ++FEE D +
Sbjct: 146 SRKPERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSSMHKEAIEMFEEMVVNKCQPDFFV 205
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ L+ Y + GL+ A + ++ QL G PN+ T+ + + +L E+
Sbjct: 206 YSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEE 256
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 126/282 (44%), Gaps = 22/282 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y AL+NA+ +AE + +M RG++ TI Y+SM++ + + + + + M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
KG + TF+ L+ C A +G++ + M E G+V D T Y T G+ G
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET--GLVADTTTYNTLIHGFYLVG 444
Query: 273 LSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWK---RYKQNLKV 326
+ AL +L++ M+ + D ++ G D L ++K + K++L
Sbjct: 445 DLNAALDLLQE----MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Query: 327 YN---------RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
+ + Y +IS L+ AE+++EE R + D + +ID C++
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
L +A + + PNV T+ + GY + + + G+E
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/276 (18%), Positives = 112/276 (40%), Gaps = 12/276 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+ LL+ +A QM + + + ++MN + G + +L+ M
Sbjct: 151 TFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG- 272
E G+ + T+ ++ D ++ ME ++ + +Y+ K G
Sbjct: 211 MEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGR 270
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVY 327
SD E + + F+ Y+ +I + + G D ++ ++ ++ Y
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFT--YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY 328
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
N +I++ +K AE++++E R + + + +ID +C++ L AE + Y
Sbjct: 329 NA----LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFY 384
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+G PN+ T+ + GY + + G+E + +
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+AE + ++M RG+V TI Y+SM++ + + + M K + TF+ L+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Query: 230 SA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
+ C A +G++ M RG+V + Y T G+ K G + AL + ++
Sbjct: 589 NGYCKAGRVDDGLELFCEM--GRRGIVANAITYITLICGFRKVGNINGALDIFQE 641
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 25/182 (13%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
L+ + EG+ L+ E+L Y+ H + +T S +D +
Sbjct: 517 LISGLINEGKFLEAEEL---------YEEMPHRGIVPDTITYSS-----------MIDGL 556
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
K +++A F+ + K P+V + L+N Y A + + +M RG+V
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
I Y +++ + + GN + EM G+ D T +L+ + E + + VAM
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK---EELKRAVAM 673
Query: 248 ME 249
+E
Sbjct: 674 LE 675
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 18/303 (5%)
Query: 115 FVLTPADVAIRLDLIAKV---QGIEQAASY-FNCVPEKLKLPSVYI--ALLNAYACAKSA 168
F +P D+I KV +G+ + A Y F+ + + ++PS+ +LLN
Sbjct: 152 FAFSPT----VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGET 207
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
A + QQM G+V + M+N + + G + + +ME G++ + T+ L
Sbjct: 208 HTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSL 267
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR--KSEV 286
++ + D E ++ M +++GV + Y GY K D+A VLR + E
Sbjct: 268 INGYVSLGDVEAAKGVLKFM-SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEA 326
Query: 287 LMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC--VISSLLKFDGM 344
++ ++ RAY +I Y G DD +R+ + L + +IC +I+ K +
Sbjct: 327 ALVPDE--RAYGVLIDGYCRTGKIDDAVRLLDEMLR-LGLKTNLFICNSLINGYCKRGEI 383
Query: 345 ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
AE + NL D N L+D YCR G +A L K G EP V T+ +
Sbjct: 384 HEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTL 443
Query: 405 ATG 407
G
Sbjct: 444 LKG 446
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 19/292 (6%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y AL++ + +KA +M + GL I ++M++ Y+ G + + LM +M
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL--DWTVYATAASGYVKAG 272
+ G D F L S A+ I KI ++ L + VY A +G K G
Sbjct: 675 DHGFFPDHECF--LKSDIRYAA----IQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTG 728
Query: 273 LSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN- 328
D A R+ ++ F + Y +I Y+A GN D+ R+ + V N
Sbjct: 729 KVDDA----RRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNI 784
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y +I+ L K + ++ A+++F + + L ++ N LID YC+ G + A L K
Sbjct: 785 VTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDK 844
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKEC 440
G P+V T+ + G ++ E+ ++ + + +++AG K + C
Sbjct: 845 MIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQ---MIKAGVDSKLIEYC 893
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 114/292 (39%), Gaps = 16/292 (5%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y LL+ Y +A + +M G+ + YN+++ + G + + H M
Sbjct: 405 YNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM 464
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ G+ D+ +S LL + EG + + A RG + T SG K G
Sbjct: 465 KXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA-RGFTKSRITFNTMISGLCKMGKM 523
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV-----WKRYKQNLKVYNR 329
+A + K + L Y +I Y N +V + ++++YN
Sbjct: 524 VEAEEIFDKMKDLGCSPD-GITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNS 582
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
+IS L K + + E R L +I LID +C+ G+L KA + ++
Sbjct: 583 ----LISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEM 638
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECL 441
G N+ M +G + + ++ M+K +++ G + P EC
Sbjct: 639 TENGLSANIIICSTMVSGLYRLGRIDEANLLMQK---MVDHG--FFPDHECF 685
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/190 (19%), Positives = 90/190 (47%), Gaps = 5/190 (2%)
Query: 98 RFSHALQISMWMTKKSNFVLTPADVAIRLDL--IAKVQGIEQAASYFNCVPEKLKLPS-- 153
R++ +I+ + + L P ++ + + + K ++ A +F+ + K +P
Sbjct: 691 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 750
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++ Y+ A + ++A + +M RGLV + YN+++N ++ N + L H++
Sbjct: 751 TYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKL 810
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+KG+ + T++ L+ + + K+ M + G+ Y+ +G K G
Sbjct: 811 HQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM-IEEGISPSVVTYSALINGLCKHGD 869
Query: 274 SDKALAVLRK 283
++++ +L +
Sbjct: 870 IERSMKLLNQ 879
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 71/154 (46%), Gaps = 5/154 (3%)
Query: 151 LPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
+P++ Y AL+N +++ ++A+ + ++ +GL + YN++++ Y + GN
Sbjct: 781 VPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFK 840
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
L +M E+GI T+S L++ D E K++ M GV Y T G
Sbjct: 841 LKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQM-IKAGVDSKLIEYCTLVQGG 899
Query: 269 VKAGLSDK--ALAVLRKSEVLMMHNKFSRAYDFV 300
K ++ L+++ + KF ++ FV
Sbjct: 900 FKTSNYNEMSKPEALKQNMNCFLLPKFKHSWKFV 933
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEW 354
+D ++ Y G + L V+ + ++ + R ++++L+K +A ++++
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY--LQNN 412
+ D+ + + +++A+C+ G + +A + K + G EPN+ T++ + GY L +
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277
Query: 413 QSEKGV 418
++ KGV
Sbjct: 278 EAAKGV 283
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 126/282 (44%), Gaps = 22/282 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y AL+NA+ +AE + +M RG++ TI Y+SM++ + + + + + M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
KG + TF+ L+ C A +G++ + M E G+V D T Y T G+ G
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET--GLVADTTTYNTLIHGFYLVG 444
Query: 273 LSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWK---RYKQNLKV 326
+ AL +L++ M+ + D ++ G D L ++K + K++L
Sbjct: 445 DLNAALDLLQE----MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Query: 327 YN---------RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
+ + Y +IS L+ AE+++EE R + D + +ID C++
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
L +A + + PNV T+ + GY + + + G+E
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/276 (18%), Positives = 113/276 (40%), Gaps = 12/276 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+ LL+ +A + QM + + + ++MN + G + +L+ M
Sbjct: 151 TFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG- 272
E G+ + T+ ++ D ++ ME ++ + +Y+ K G
Sbjct: 211 MEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGR 270
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVY 327
SD E + + F+ Y+ +I + + G D ++ ++ ++ Y
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFT--YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY 328
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
N +I++ +K AE++++E R + + + +ID +C++ L AE + Y
Sbjct: 329 NA----LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFY 384
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+G PN+ T+ + GY + + G+E + +
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+AE + ++M RG+V TI Y+SM++ + + + M K + TF+ L+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Query: 230 SA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
+ C A +G++ M RG+V + Y T G+ K G + AL + ++
Sbjct: 589 NGYCKAGRVDDGLELFCEM--GRRGIVANAITYITLICGFRKVGNINGALDIFQE 641
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 25/182 (13%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
L+ + EG+ L+ E+L Y+ H + +T S +D +
Sbjct: 517 LISGLINEGKFLEAEEL---------YEEMPHRGIVPDTITYSS-----------MIDGL 556
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
K +++A F+ + K P+V + L+N Y A + + +M RG+V
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
I Y +++ + + GN + EM G+ D T +L+ + E + + VAM
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK---EELKRAVAM 673
Query: 248 ME 249
+E
Sbjct: 674 LE 675
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 155/385 (40%), Gaps = 67/385 (17%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D + LL++WV GR + ++I++ H++Q+ WM + N+ +
Sbjct: 111 DDVEGLLNRWV--GR-FSRKNFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNM 167
Query: 125 RLDLIAKVQGIEQAASYF------NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQM 178
+ L A+ ++QA F C P+ Y AL+NA+ A A IM M
Sbjct: 168 MIRLHARHNIVDQARGLFFEMQKWRCKPDA----ETYNALINAHGRAGQWRWAMNIMDDM 223
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG 238
+ YN+++N +GN+K+ ++ +M E G+ D T +I+LS A G
Sbjct: 224 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLS---AYKRG 280
Query: 239 EGIDKIVAMMEADRGVVL--DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA 296
K+++ E +G + D T VK G + KA+ + M K S
Sbjct: 281 NQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNS-----MKEKRSEC 335
Query: 297 YDFVIT------QYAACGNKDDVLRVWKR-----YKQNLKVYNR---------------- 329
Y V+T Y+ CG ++ + K N+ YN
Sbjct: 336 YPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFS 395
Query: 330 ---------------GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP-NHLIDAY 373
Y ++++ K E A K+FE RN C + N LIDAY
Sbjct: 396 VFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMR-RNHCKPNLVSYNALIDAY 454
Query: 374 CRRGLLHKAETLIYKAQLRGTEPNV 398
+GLL +A ++++ + G +PN+
Sbjct: 455 GSKGLLTEAVEILHEMERNGVQPNI 479
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 119/281 (42%), Gaps = 50/281 (17%)
Query: 136 EQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
++A S FN + + P V Y +LLNAY + EKA + + MR + YN++
Sbjct: 391 KEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNAL 450
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
++ Y G + ++HEME G+ + + LL+AC I +++ E RG
Sbjct: 451 IDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAEL-RG 509
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDV 313
+ L+ T Y +A Y+ G DKAL++ R
Sbjct: 510 IKLNTTAYNSAIGSYLSVGEYDKALSLYR------------------------------A 539
Query: 314 LRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP------N 367
+R K+ K + YN +IS K A +E D++IP +
Sbjct: 540 MRT-KKVKPDPVTYN----VLISGCCKMSKYGEALGFLDE------MMDLKIPLSKEVYS 588
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+I AY ++G + +AE++ K ++ G P+V T+ M Y
Sbjct: 589 SVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAY 629
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 113/298 (37%), Gaps = 40/298 (13%)
Query: 163 ACAKSAEKAEI--IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
AC + +K +I ++ RG+ T YNS + Y G Y K SL M K +
Sbjct: 488 ACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKP 547
Query: 221 DKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALA 279
D T+++L+S C S GE + + MM D + L VY++ Y K G +A +
Sbjct: 548 DPVTYNVLISGCCKMSKYGEALGFLDEMM--DLKIPLSKEVYSSVICAYSKQGQVTEAES 605
Query: 280 VLRKSEV------LMMHNKFSRAYDFVITQYAACG-----NKDDVLRVWKRYKQNLKVYN 328
+ K ++ ++ + AYD A DDV ++ +N
Sbjct: 606 MFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFN 665
Query: 329 RG----YICVISSLLK----------FDGMESAEKIFEEW----------ESRNLCHDIR 364
+G + V++ ++ F M SA + EW E I
Sbjct: 666 KGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIG 725
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ N L+ + G + L YK G E N T+ ++ L K +E ++
Sbjct: 726 LLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILLKNLLAAGNWRKYIEVLQ 783
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 144 CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
C P+ + Y A+++AY A++ EKA + +M + +I +S+M + + G
Sbjct: 615 CRPDVI----TYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQP 670
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVV 255
K+ L M EK I + +F ++SAC+ + I ++ +ME VV
Sbjct: 671 AKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWREIIGLIKLMEPSISVV 722
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 126/282 (44%), Gaps = 22/282 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y AL+NA+ +AE + +M RG++ TI Y+SM++ + + + + + M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
KG + TF+ L+ C A +G++ + M E G+V D T Y T G+ G
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET--GLVADTTTYNTLIHGFYLVG 444
Query: 273 LSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWK---RYKQNLKV 326
+ AL +L++ M+ + D ++ G D L ++K + K++L
Sbjct: 445 DLNAALDLLQE----MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Query: 327 YN---------RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
+ + Y +IS L+ AE+++EE R + D + +ID C++
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
L +A + + PNV T+ + GY + + + G+E
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/276 (18%), Positives = 113/276 (40%), Gaps = 12/276 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+ LL+ +A + QM + + + ++MN + G + +L+ M
Sbjct: 151 TFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E G+ + T+ ++ D ++ ME ++ + +Y+ K G
Sbjct: 211 MEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGR 270
Query: 274 -SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVY 327
SD E + + F+ Y+ +I + + G D ++ ++ ++ Y
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFT--YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY 328
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
N +I++ +K AE++++E R + + + +ID +C++ L AE + Y
Sbjct: 329 NA----LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFY 384
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+G PN+ T+ + GY + + G+E + +
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+AE + ++M RG+V TI Y+SM++ + + + M K + TF+ L+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Query: 230 SA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
+ C A +G++ M RG+V + Y T G+ K G + AL + ++
Sbjct: 589 NGYCKAGRVDDGLELFCEM--GRRGIVANAITYITLICGFRKVGNINGALDIFQE 641
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 25/182 (13%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
L+ + EG+ L+ E+L Y+ H + +T S +D +
Sbjct: 517 LISGLINEGKFLEAEEL---------YEEMPHRGIVPDTITYSS-----------MIDGL 556
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
K +++A F+ + K P+V + L+N Y A + + +M RG+V
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
I Y +++ + + GN + EM G+ D T +L+ + E + + VAM
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK---EELKRAVAM 673
Query: 248 ME 249
+E
Sbjct: 674 LE 675
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 126/282 (44%), Gaps = 22/282 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y AL+NA+ +AE + +M RG++ TI Y+SM++ + + + + + M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
KG + TF+ L+ C A +G++ + M E G+V D T Y T G+ G
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET--GLVADTTTYNTLIHGFYLVG 444
Query: 273 LSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWK---RYKQNLKV 326
+ AL +L++ M+ + D ++ G D L ++K + K++L
Sbjct: 445 DLNAALDLLQE----MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Query: 327 YN---------RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
+ + Y +IS L+ AE+++EE R + D + +ID C++
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
L +A + + PNV T+ + GY + + + G+E
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/276 (18%), Positives = 113/276 (40%), Gaps = 12/276 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+ LL+ +A + QM + + + ++MN + G + +L+ M
Sbjct: 151 TFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E G+ + T+ ++ D ++ ME ++ + +Y+ K G
Sbjct: 211 MEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGR 270
Query: 274 -SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVY 327
SD E + + F+ Y+ +I + + G D ++ ++ ++ Y
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFT--YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY 328
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
N +I++ +K AE++++E R + + + +ID +C++ L AE + Y
Sbjct: 329 NA----LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFY 384
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+G PN+ T+ + GY + + G+E + +
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+AE + ++M RG+V TI Y+SM++ + + + M K + TF+ L+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Query: 230 SA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
+ C A +G++ M RG+V + Y T G+ K G + AL + ++
Sbjct: 589 NGYCKAGRVDDGLELFCEM--GRRGIVANAITYITLICGFRKVGNINGALDIFQE 641
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 25/182 (13%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
L+ + EG+ L+ E+L Y+ H + +T S +D +
Sbjct: 517 LISGLINEGKFLEAEEL---------YEEMPHRGIVPDTITYSS-----------MIDGL 556
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
K +++A F+ + K P+V + L+N Y A + + +M RG+V
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
I Y +++ + + GN + EM G+ D T +L+ + E + + VAM
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK---EELKRAVAM 673
Query: 248 ME 249
+E
Sbjct: 674 LE 675
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 155/385 (40%), Gaps = 67/385 (17%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D + LL++WV GR + ++I++ H++Q+ WM + N+ +
Sbjct: 111 DDVEGLLNRWV--GR-FSRKNFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNM 167
Query: 125 RLDLIAKVQGIEQAASYF------NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQM 178
+ L A+ ++QA F C P+ Y AL+NA+ A A IM M
Sbjct: 168 MIRLHARHNIVDQARGLFFEMQKWRCKPDA----ETYNALINAHGRAGQWRWAMNIMDDM 223
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG 238
+ YN+++N +GN+K+ ++ +M E G+ D T +I+LS A G
Sbjct: 224 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLS---AYKRG 280
Query: 239 EGIDKIVAMMEADRGVVL--DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA 296
K+++ E +G + D T VK G + KA+ + M K S
Sbjct: 281 NQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNS-----MKEKRSEC 335
Query: 297 YDFVIT------QYAACGNKDDVLRVWKR-----YKQNLKVYNR---------------- 329
Y V+T Y+ CG ++ + K N+ YN
Sbjct: 336 YPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFS 395
Query: 330 ---------------GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP-NHLIDAY 373
Y ++++ K E A K+FE RN C + N LIDAY
Sbjct: 396 VFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMR-RNHCKPNLVSYNALIDAY 454
Query: 374 CRRGLLHKAETLIYKAQLRGTEPNV 398
+GLL +A ++++ + G +PN+
Sbjct: 455 GSKGLLTEAVEILHEMERNGVQPNI 479
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 119/281 (42%), Gaps = 50/281 (17%)
Query: 136 EQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
++A S FN + + P V Y +LLNAY + EKA + + MR + YN++
Sbjct: 391 KEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNAL 450
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
++ Y G + ++HEME G+ + + LL+AC I +++ E RG
Sbjct: 451 IDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAEL-RG 509
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDV 313
+ L+ T Y +A Y+ G DKAL++ R
Sbjct: 510 IKLNTTAYNSAIGSYLSVGEYDKALSLYR------------------------------A 539
Query: 314 LRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP------N 367
+R K+ K + YN +IS K A +E D++IP +
Sbjct: 540 MRT-KKVKPDPVTYN----VLISGCCKMSKYGEALGFLDE------MMDLKIPLSKEVYS 588
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+I AY ++G + +AE++ K ++ G P+V T+ M Y
Sbjct: 589 SVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAY 629
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 113/298 (37%), Gaps = 40/298 (13%)
Query: 163 ACAKSAEKAEI--IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
AC + +K +I ++ RG+ T YNS + Y G Y K SL M K +
Sbjct: 488 ACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKP 547
Query: 221 DKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALA 279
D T+++L+S C S GE + + MM D + L VY++ Y K G +A +
Sbjct: 548 DPVTYNVLISGCCKMSKYGEALGFLDEMM--DLKIPLSKEVYSSVICAYSKQGQVTEAES 605
Query: 280 VLRKSEV------LMMHNKFSRAYDFVITQYAACG-----NKDDVLRVWKRYKQNLKVYN 328
+ K ++ ++ + AYD A DDV ++ +N
Sbjct: 606 MFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFN 665
Query: 329 RG----YICVISSLLK----------FDGMESAEKIFEEW----------ESRNLCHDIR 364
+G + V++ ++ F M SA + EW E I
Sbjct: 666 KGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIG 725
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ N L+ + G + L YK G E N T+ ++ L K +E ++
Sbjct: 726 LLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILLKNLLAAGNWRKYIEVLQ 783
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 144 CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
C P+ + Y A+++AY A++ EKA + +M + +I +S+M + + G
Sbjct: 615 CRPDVI----TYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQP 670
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVV 255
K+ L M EK I + +F ++SAC+ + I ++ +ME VV
Sbjct: 671 AKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWREIIGLIKLMEPSISVV 722
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 128/283 (45%), Gaps = 5/283 (1%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K Q +++A + + +P+ Y ++++ Y + ++A +++M G+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ YNS+M+ + G + + M ++G+ + T+ LL A + ++
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
+M G+ + V++ Y K G D+A+ V K + N + Y VI
Sbjct: 364 LM-VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL-NPDTVTYGTVIGILCK 421
Query: 307 CGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
G +D +R +++ + L N Y +I SL FD + A+++ E R +C D
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
N +ID++C+ G + ++E L G +PN+ T+ + GY
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGY 524
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 150/353 (42%), Gaps = 18/353 (5%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV--AI 124
M LLD V G + I+I + + A+ + M ++ L P V
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG---LNPDTVTYGT 414
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+ ++ K +E A YF + ++ P VY +L+++ +KA+ ++ +M DRG
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ TI +NS+++ + + G + + L M G+ + T+S L+ A +
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEAT 534
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVI- 301
K++A M G+ D Y T +GY K + AL + R+ E + Y+ ++
Sbjct: 535 KLLASM-VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII-TYNIILQ 592
Query: 302 ----TQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
T+ A + V + L YN ++ L K + + A ++F+
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELSTYN----IILHGLCKNNLTDEALRMFQNLCLT 648
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+L + R N +I A + G +A+ L G P+VRT+ LMA ++
Sbjct: 649 DLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIE 701
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 121/299 (40%), Gaps = 25/299 (8%)
Query: 139 ASYFNCVPEKLKLPSVYIALLNAYACA--KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNV 196
A+ N + + ++ ++ L CA ++++ +I++++M G + YN ++
Sbjct: 112 AALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKG 171
Query: 197 YYQTGNYKKLDSLMHEMEEKGIDC--DKYTFSILLSACAAASDGEGIDKIVAMMEA--DR 252
++ L+ M + G DC D +++ +++ D +DK DR
Sbjct: 172 LCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD---LDKAYGTYHEMLDR 228
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGN 309
G++ + Y + + KA DKA+ VL M+ N R Y+ ++ Y + G
Sbjct: 229 GILPNVVTYNSIIAALCKAQAMDKAMEVLTS----MVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 310 KDDVLRVWKR-----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
+ + K+ + ++ YN ++ L K A K+F+ R L +I
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNS----LMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
L+ Y +G L + L+ G PN + ++ Y + + ++ + K
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 131/323 (40%), Gaps = 31/323 (9%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ L+ AYA ++A ++ +MR +GL T+ Y +++ + ++G + +M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Query: 214 EEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
++ + + S++ S C + + I+ M+ DRG+ LD + + + K G
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML--DRGICLDTIFFNSIIDSHCKEG 493
Query: 273 -------LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY----- 320
L D + + K ++ Y +I Y G D+ ++
Sbjct: 494 RVIESEKLFDLMVRIGVKPNII--------TYSTLIDGYCLAGKMDEATKLLASMVSVGM 545
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
K + YN +I+ K ME A +F E ES + DI N ++ +
Sbjct: 546 KPDCVTYNT----LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKEC 440
A+ L GT+ + T+ ++ G +NN +++ + M + L L + +
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR-MFQNLCLTDLQLETRTFNIM 660
Query: 441 LAACLGYYKKERDIEGADYFIKL 463
+ A L K R+ E D F L
Sbjct: 661 IGALL---KVGRNDEAKDLFAAL 680
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 127/306 (41%), Gaps = 16/306 (5%)
Query: 95 LYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI---------AKVQGIEQAASYFNCV 145
+Y H+L I K +L D I LD I K + ++ F+ +
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505
Query: 146 PEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
P++ Y L++ Y A ++A ++ M G+ + YN+++N Y +
Sbjct: 506 VRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI-VAMMEADRGVVLDWTVYA 262
+ L EME G+ D T++I+L ++ V + E+ G L+ + Y
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES--GTQLELSTYN 623
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ 322
G K L+D+AL + + + + + +R ++ +I G D+ ++
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLE-TRTFNIMIGALLKVGRNDEAKDLFAALSA 682
Query: 323 NLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
N V + R Y + +L++ +E + +F E + R+ N ++ +RG + +
Sbjct: 683 NGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITR 742
Query: 382 AETLIY 387
A T ++
Sbjct: 743 AGTYLF 748
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 124/270 (45%), Gaps = 17/270 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y +LLN Y A S ++A ++ +R GL + YN +++ Y + G+ ++ L EM
Sbjct: 380 TYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM 439
Query: 214 EEKGIDCDKYTFSILL----SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
E+G D T++IL+ +AC+ A E D++++ +G+ D Y T +
Sbjct: 440 VEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLS-----KGLQPDCFAYNTR----I 490
Query: 270 KAGLSDKALA-VLRKSEVLMMHNKFSR--AYDFVITQYAACGNKDDVLRVWKRYKQN-LK 325
+A L+ A+A R EV+M+ S Y+ +I GN +D + + N L+
Sbjct: 491 RAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQ 550
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
Y C+I + + + A K F++ S L I AYCRRG L+ A
Sbjct: 551 PDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGW 610
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
K G EPN T+ ++ + +++
Sbjct: 611 FRKMLEEGVEPNEITYNVLIHALCRTGRTQ 640
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 53/244 (21%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC--DKYTFSILLSA 231
+ +M G+ + YN++++ + + G K+ L+ EME +G C + T +++++
Sbjct: 224 VHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITG 283
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
A D +++ M+E R LS KA
Sbjct: 284 LARKGD---LEEAAEMVEGMR--------------------LSKKA-------------- 306
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-------YICVISSLLKFDGM 344
S Y+ +IT A G V K L++ N G Y +I LL+ +
Sbjct: 307 -SSFTYNPLITGLLAKG------FVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQV 359
Query: 345 ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
E+A+ F E + L D+ N L++ YC+ G L +A L + G P V T+ ++
Sbjct: 360 EAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNIL 419
Query: 405 ATGY 408
GY
Sbjct: 420 IDGY 423
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 120/310 (38%), Gaps = 14/310 (4%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I +D ++ +E+A + E+ LP V Y L+ A S A +M +
Sbjct: 418 ILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSK 477
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEG 240
GL YN+ + G K L M +GI D T++IL+ C + +
Sbjct: 478 GLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDA 537
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA---Y 297
D + M+ G+ D Y + + GL +A RK M+ + + + Y
Sbjct: 538 KDLQMKMVH--NGLQPDCITYTCLIHAHCERGLLREA----RKFFKDMISDGLAPSAVTY 591
Query: 298 DFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWES 356
I Y GN +++ ++ ++ Y +I +L + + A + F E
Sbjct: 592 TVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLE 651
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
R L + LID C+ G A ++ G P+ T + G+ + + +
Sbjct: 652 RGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDEGHMNH- 710
Query: 417 GVEAMKKALV 426
+E ++ A++
Sbjct: 711 AIEYLENAVL 720
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 96/252 (38%), Gaps = 9/252 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+ +KA+ + +M + G++ + YN+M++ Q+G + EM
Sbjct: 310 TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEM 369
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
G+ D T++ LL+ C A S E + + A G+ Y GY + G
Sbjct: 370 RAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHA--GLAPTVLTYNILIDGYCRLG 427
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVI---TQYAACGNKDDVLRVWKRYKQNLKVYNR 329
++A R E ++ + I + AC + + L+
Sbjct: 428 DLEEA---RRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCF 484
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y I + L + A ++ E + D N LID C+ G L+ A+ L K
Sbjct: 485 AYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKM 544
Query: 390 QLRGTEPNVRTW 401
G +P+ T+
Sbjct: 545 VHNGLQPDCITY 556
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 127/277 (45%), Gaps = 9/277 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY L+ A+A E++ +I+++MR++G++ YNS++ + + ++ + + EM
Sbjct: 462 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 521
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E+ + + +T+ + + A + E D+ M GV+ + +Y G+ K G
Sbjct: 522 LERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEM-LSCGVLPNVGIYTALIEGHCKEGN 580
Query: 274 SDKALAVLR---KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR- 329
+A +V R VL + + Y +I + G + ++ ++ + N
Sbjct: 581 VTEAFSVFRFILSRRVL----QDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 636
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +IS K ++ A ++ EE + + DI N LID C+ G + +A+ L
Sbjct: 637 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 696
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
+ RG PN T+ M GY ++ + +++ L+
Sbjct: 697 EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLL 733
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 118/267 (44%), Gaps = 11/267 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+N + K + +A++++ +M D GL + I YN++++ + + G+ ++ + EM
Sbjct: 287 TYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEM 346
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
GI+ + ++ LL+ C A + ++ + MME +GV D Y+ G+ +
Sbjct: 347 VACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMME--KGVEPDSQTYSLLIEGHCRGQ 404
Query: 273 LSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYN 328
+A +L + M K + Y +I CGN + + N LK
Sbjct: 405 NMARAFELLDE----MKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNA 460
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y ++++ K +E + I E + + D+ N LI +C+ + +A T + +
Sbjct: 461 VVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLME 520
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSE 415
R PN T+ GY + + E
Sbjct: 521 MLERRLRPNAHTYGAFIDGYSKAGEME 547
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 126/312 (40%), Gaps = 41/312 (13%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+ +A S F + + L V Y L++ + +A I +++++GL+ YNS
Sbjct: 581 VTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNS 640
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+++ + GN K L+ EM KGI+ D T++IL+ A + E + +E R
Sbjct: 641 LISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEG-R 699
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM--------MHN----------KFS 294
G+ + YA GY K+ A +L E+L+ ++N KF
Sbjct: 700 GLTPNCVTYAAMVDGYCKSKNPTAAFQLLE--EMLLRGVPPDAFIYNVILNFCCKEEKFE 757
Query: 295 RAYDF-----------------VITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVIS 336
+A D +I Y G + + + + + N Y +I
Sbjct: 758 KALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLID 817
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
K M A++++ E + RN+ + L+ Y G + + L + +G EP
Sbjct: 818 HNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEP 877
Query: 397 NVRTWYLMATGY 408
+ T+Y+M Y
Sbjct: 878 DKMTYYVMIDAY 889
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 107/253 (42%), Gaps = 12/253 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++ A E+A+ + + RGL + Y +M++ Y ++ N L+ EM
Sbjct: 672 TYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 731
Query: 214 EEKGIDCDKYTFSILLSACAAASDGE-GIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+G+ D + ++++L+ C E +D M+E + + T GY K+G
Sbjct: 732 LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFN---TLIEGYCKSG 788
Query: 273 LSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYN 328
+A +L + M+ +F Y +I G + R+W ++ N+
Sbjct: 789 KLQEANHLLEE----MIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTA 844
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+ Y ++ M +FEE ++ + D +IDAYCR G + +A L +
Sbjct: 845 KTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDE 904
Query: 389 AQLRGTEPNVRTW 401
++G +V +
Sbjct: 905 ILVKGMPMSVAAY 917
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 114/269 (42%), Gaps = 21/269 (7%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P Y AL++ + E+A I +M G+ I +N+++N + G +K +M
Sbjct: 320 PITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQ 379
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTV--YATAASGYV 269
EM EKG++ D T+S+L+ G+ + + +++ + L TV Y+ +G
Sbjct: 380 EMMEKGVEPDSQTYSLLIE---GHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 436
Query: 270 KAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYKQ---- 322
+ G A+LR+ M+ N + Y ++T +A G ++ + +R ++
Sbjct: 437 RCGNLQGTNAILRE----MVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGIL 492
Query: 323 -NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
++ YN +I K ME A E R L + ID Y + G +
Sbjct: 493 PDVFCYNS----LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEI 548
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
A+ + G PNV + + G+ +
Sbjct: 549 ADRYFNEMLSCGVLPNVGIYTALIEGHCK 577
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/375 (18%), Positives = 159/375 (42%), Gaps = 30/375 (8%)
Query: 108 WMTKKSNFVLTPADVAIRLDLIA---------KVQGIEQAASYFNCVPEKLKLPSVYI-- 156
++ + N L P + R L++ K +E F+ + LP VY
Sbjct: 160 FLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYT 219
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
+++A+ + + A+ ++ +M ++G + YN ++ + + L M +K
Sbjct: 220 NMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDK 279
Query: 217 GIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
G+ D YT+ IL++ C E K++ + D G+ + Y G+++ G +
Sbjct: 280 GLVPDLYTYDILINGFCMEKRSREA--KLMLLEMIDVGLKPEPITYNALIDGFMRQGDIE 337
Query: 276 KALAVLRKSEVLMMHNKFSR-AYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYIC 333
+A + K E++ + + ++ ++ G + L + + ++ ++ ++ Y
Sbjct: 338 QAFRI--KDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSL 395
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+I + M A ++ +E + R L + + +I+ CR G L ++ + + G
Sbjct: 396 LIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG 455
Query: 394 TEPNVRTWYLMATGYLQNNQSEKG---VEAMKKALVLLEAGTRWKPSKECLAA-CLGYYK 449
+PN + + T + + + E+ +E M++ +L P C + +G+ K
Sbjct: 456 LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGIL--------PDVFCYNSLIIGFCK 507
Query: 450 KERDIEGADYFIKLL 464
+R E Y +++L
Sbjct: 508 AKRMEEARTYLMEML 522
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 78/164 (47%), Gaps = 4/164 (2%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
LL++ + G P D +I+ ++F AL + M +K + ++
Sbjct: 727 LLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG--FASTVSFNTLIEGY 784
Query: 130 AKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
K +++A + EK +P+ Y +L++ A +A+ + +M++R ++
Sbjct: 785 CKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTA 844
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
Y S+++ Y+ GN ++ +L EM KGI+ DK T+ +++ A
Sbjct: 845 KTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDA 888
>gi|302753488|ref|XP_002960168.1| hypothetical protein SELMODRAFT_402234 [Selaginella moellendorffii]
gi|300171107|gb|EFJ37707.1| hypothetical protein SELMODRAFT_402234 [Selaginella moellendorffii]
Length = 585
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 158/351 (45%), Gaps = 16/351 (4%)
Query: 115 FVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEII 174
F + D +++D A V + A FN +P+ K Y +L + + EKA ++
Sbjct: 112 FEIDDRDYVLQVDYYAHVD-MYLAEMAFNRLPDDKKTEEAYNYILAGFVRNRMLEKAVVV 170
Query: 175 MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAA 234
M ++R+ GLV M +++ G +++ +L+ E G+ + + L
Sbjct: 171 MDKIRELGLV-SAFSLEQMTLLFHYLGLERRIPALVVEARSLGLHFHPHFLNTHLWIKRR 229
Query: 235 ASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
D G+++IV +E G WT Y AS Y++AGL +KA A L +E + + +F
Sbjct: 230 HGDLSGMEEIVEELEL-MGRSNAWT-YIFIASAYIQAGLPEKAHAALGAAEAGIRNGRFK 287
Query: 295 ---RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
+ Y+ ++ Y + + + RVW V ++ +I +L + AE+IF
Sbjct: 288 KQRKVYNKILLLYGLLKDTEGIERVWGILNSRPLVAVHNHLFMIEALGSAGNIGRAEEIF 347
Query: 352 EEWES-RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR-GTEPNVRTWYLMATGYL 409
EE R + + R + AY + GL+ KA ++Y + P ++ GY+
Sbjct: 348 EELRKCRGVRKEYRQFIVMAGAYTKNGLMDKATEVLYDYPAKYKARPVPELYHYFIKGYI 407
Query: 410 QNNQSEKGVEAMKKALVLLEAGTRWKPSK---ECLAACLGYYKKERDIEGA 457
+ N+ + +EA ++ L+ R++ +K E + + Y + D+ A
Sbjct: 408 KRNEKDWAIEAYEEGQSLV----RYRSTKLWYETMLEVMSIYAERGDVTSA 454
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 127/277 (45%), Gaps = 9/277 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY L+ A+A E++ +I+++MR++G++ YNS++ + + ++ + + EM
Sbjct: 453 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 512
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E+ + + +T+ + + A + E D+ M GV+ + +Y G+ K G
Sbjct: 513 LERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEM-LSCGVLPNVGIYTALIEGHCKEGN 571
Query: 274 SDKALAVLR---KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR- 329
+A +V R VL + + Y +I + G + ++ ++ + N
Sbjct: 572 VTEAFSVFRFILSRRVL----QDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 627
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +IS K ++ A ++ EE + + DI N LID C+ G + +A+ L
Sbjct: 628 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 687
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
+ RG PN T+ M GY ++ + +++ L+
Sbjct: 688 EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLL 724
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 134/299 (44%), Gaps = 13/299 (4%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDR 181
+ L++ K + +++A + +K +P +Y L+N + K + +A++++ +M D
Sbjct: 246 VLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDV 305
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEG 240
GL + I YN++++ + + G+ ++ + EM GI+ + ++ LL+ C A +
Sbjct: 306 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKA 365
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AY 297
++ + MME +GV D Y+ G+ + +A +L + M K + Y
Sbjct: 366 LEIMQEMME--KGVEPDSQTYSLLIEGHCRGQNMARAFELLDE----MKKRKLAPTVLTY 419
Query: 298 DFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWES 356
+I CGN + + N LK Y ++++ K +E + I E
Sbjct: 420 SVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMRE 479
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+ + D+ N LI +C+ + +A T + + R PN T+ GY + + E
Sbjct: 480 QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEME 538
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 126/312 (40%), Gaps = 41/312 (13%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+ +A S F + + L V Y L++ + +A I +++++GL+ YNS
Sbjct: 572 VTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNS 631
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+++ + GN K L+ EM KGI+ D T++IL+ A + E + +E R
Sbjct: 632 LISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEG-R 690
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM--------MHN----------KFS 294
G+ + YA GY K+ A +L E+L+ ++N KF
Sbjct: 691 GLTPNCVTYAAMVDGYCKSKNPTAAFQLLE--EMLLRGVPPDAFIYNVILNFCCKEEKFE 748
Query: 295 RAYDF-----------------VITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVIS 336
+A D +I Y G + + + + + N Y +I
Sbjct: 749 KALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLID 808
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
K M A++++ E + RN+ + L+ Y G + + L + +G EP
Sbjct: 809 HNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEP 868
Query: 397 NVRTWYLMATGY 408
+ T+Y+M Y
Sbjct: 869 DKMTYYVMIDAY 880
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 117/280 (41%), Gaps = 18/280 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++ A E+A+ + + RGL + Y +M++ Y ++ N L+ EM
Sbjct: 663 TYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 722
Query: 214 EEKGIDCDKYTFSILLSACAAASDGE-GIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+G+ D + ++++L+ C E +D M+E + + T GY K+G
Sbjct: 723 LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFN---TLIEGYCKSG 779
Query: 273 LSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYN 328
+A +L + M+ +F Y +I G + R+W ++ N+
Sbjct: 780 KLQEANHLLEE----MIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTA 835
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA-----E 383
+ Y ++ M +FEE ++ + D +IDAYCR G + +A E
Sbjct: 836 KTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDE 895
Query: 384 TLIYKAQLR-GTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
L+ ++ G + T ++A G+ ++ E ++
Sbjct: 896 ILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLR 935
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 114/269 (42%), Gaps = 21/269 (7%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P Y AL++ + E+A I +M G+ I +N+++N + G +K +M
Sbjct: 311 PITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQ 370
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTV--YATAASGYV 269
EM EKG++ D T+S+L+ G+ + + +++ + L TV Y+ +G
Sbjct: 371 EMMEKGVEPDSQTYSLLIE---GHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 427
Query: 270 KAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYKQ---- 322
+ G A+LR+ M+ N + Y ++T +A G ++ + +R ++
Sbjct: 428 RCGNLQGTNAILRE----MVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGIL 483
Query: 323 -NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
++ YN +I K ME A E R L + ID Y + G +
Sbjct: 484 PDVFCYNS----LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEI 539
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
A+ + G PNV + + G+ +
Sbjct: 540 ADRYFNEMLSCGVLPNVGIYTALIEGHCK 568
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 9/220 (4%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
LL++ + G P D +I+ ++F AL + M +K + ++
Sbjct: 718 LLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG--FASTVSFNTLIEGY 775
Query: 130 AKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
K +++A + EK +P+ Y +L++ A +A+ + +M++R ++
Sbjct: 776 CKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTA 835
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI---DK 243
Y S+++ Y+ GN ++ +L EM KGI+ DK T+ +++ A C + E D+
Sbjct: 836 KTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDE 895
Query: 244 I-VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR 282
I V M G L + A G+ AG D+A VLR
Sbjct: 896 ILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLR 935
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 122/269 (45%), Gaps = 9/269 (3%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+++L+ + K ++ +++DRGL+ NS++ + G ++L + M+
Sbjct: 151 HVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMK 210
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
E GID YT++ L++ + E +K+ +M+ + +V D Y GY KAG
Sbjct: 211 ENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGK-IVPDTVTYNIMIKGYCKAGKL 269
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY----KQNLKVYNRG 330
KA+ R E M + K + + Q AC ++ D Y ++ L++
Sbjct: 270 QKAMEKFRDME--MKNVKPDKITYMTLIQ--ACYSERDFDTCLSLYLEMEERGLEIPPHS 325
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y VI L K A +FE + ++ I LID+Y + G + +A L + +
Sbjct: 326 YSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMK 385
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
G EP+ T+ ++ G ++ + + G+E
Sbjct: 386 NEGFEPDAVTYSVLVNGLCKSGRLDDGME 414
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 133/316 (42%), Gaps = 48/316 (15%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PS+Y L+N + E AE + + M +V T+ YN M+ Y + G +K
Sbjct: 216 PSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEK 275
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+ME K + DK T+ L+ AC + D + + ME +RG+ + Y+ G
Sbjct: 276 FRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEME-ERGLEIPPHSYSLVIGGLC 334
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRA----YDFVITQYAACGNKDDVLRVWKRYKQ--- 322
K +A AV M+ K RA Y +I Y+ G+ ++ +R+++R K
Sbjct: 335 KQRKCMEAYAVFET-----MNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGF 389
Query: 323 ----------------------NLKVY----NRG-------YICVISSLLKFDGMESAEK 349
++++ N+G Y +I L K +E AE
Sbjct: 390 EPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAEN 449
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
+FEE + D N +IDA + G + +A L + + G + V T+ ++ G
Sbjct: 450 LFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLF 509
Query: 410 QNNQSEKGVEAMKKAL 425
+ +++E+ ++ K +
Sbjct: 510 KEHKNEEAIKFWDKMI 525
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 118/258 (45%), Gaps = 10/258 (3%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+ Y C ++ KA ++ +M +R ++ + YNS+++ ++GN+ L+ M
Sbjct: 431 YNELIKGY-CKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 215 EKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
++G+ D +T+ S++ S C + E D ++ + D V+ + +Y GY KAG
Sbjct: 490 DRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKD--VIPNVVMYTALIDGYCKAGK 547
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN---KDDVLRVWKRYKQNLKVYNRG 330
++A +L K ++ N + F + C + K+ L K K +L+
Sbjct: 548 VNEAHLMLEK---MLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVST 604
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
+I LLK + A + F++ S D I YCR G L AE ++ K +
Sbjct: 605 DTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMK 664
Query: 391 LRGTEPNVRTWYLMATGY 408
G P++ T+ + GY
Sbjct: 665 ENGVSPDLFTYSSLIKGY 682
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 131/314 (41%), Gaps = 16/314 (5%)
Query: 102 ALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNA 161
+I + M K + V AD LDL K+ E + + Y LLN+
Sbjct: 142 VFKIRLLMIKSCDSV---ADTLFVLDLCRKMNKDESFELKYKLII------GCYNTLLNS 192
Query: 162 YACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCD 221
A ++ + + +M + + YN M+N Y + GN ++ + + + E G+D D
Sbjct: 193 LARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPD 252
Query: 222 KYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL 281
+T++ L+ D + K+ M +G + Y G D+A+ +
Sbjct: 253 FFTYTSLIMGYCQRKDLDSAFKVFKEMPL-KGCRRNEVAYTHLIHGLCVERRIDEAMDLF 311
Query: 282 RKSEVLMMHNKFSRAYDFVITQYAACGN--KDDVLRVWKRYKQ-NLKVYNRGYICVISSL 338
K + + + + + A CG+ K + L + K ++ +K Y +I SL
Sbjct: 312 VK---MKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSL 368
Query: 339 LKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
+E A ++ + + L ++ N LI+ YC+RG++ A ++ + R PN
Sbjct: 369 CSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNT 428
Query: 399 RTWYLMATGYLQNN 412
RT+ + GY + N
Sbjct: 429 RTYNELIKGYCKRN 442
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 126/280 (45%), Gaps = 14/280 (5%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
I++A F + + P+V Y L+ A ++ +A ++++M ++G+ Y
Sbjct: 304 IDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTV 363
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEAD 251
+++ +K L+ +M EKG+ + T++ L++ C + +D +V +ME+
Sbjct: 364 LIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALD-VVELMES- 421
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACG 308
R + + Y GY K + KA+ VL K M+ K Y+ +I G
Sbjct: 422 RNLRPNTRTYNELIKGYCKRNVH-KAMGVLNK----MLERKVLPDVVTYNSLIDGQCRSG 476
Query: 309 NKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
N D R+ V + Y +I SL K +E A +F+ E +++ ++ +
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYT 536
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
LID YC+ G +++A ++ K + PN T+ + G
Sbjct: 537 ALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHG 576
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 105/235 (44%), Gaps = 5/235 (2%)
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
YN+++N + G ++ + EM E + + YT++ +++ + E ++ V+M+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMI- 244
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN 309
+ G+ D+ Y + GY + D A V ++ L + AY +I
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMP-LKGCRRNEVAYTHLIHGLCVERR 303
Query: 310 KDDVLRVWKRYKQNLKVYN--RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
D+ + ++ + K + Y R Y +I +L + A + +E E + + +I
Sbjct: 304 IDEAMDLFVKMKDD-DCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYT 362
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
LID+ C + L KA L+ + +G PNV T+ + GY + E ++ ++
Sbjct: 363 VLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVE 417
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 124/299 (41%), Gaps = 25/299 (8%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ + ++A + +M+D Y ++ + + +L+ EME
Sbjct: 291 YTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEME 350
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
EKGI + +T+++L+ + + E +++ M ++G++ + Y +GY K G+
Sbjct: 351 EKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQM-LEKGLMPNVITYNALINGYCKRGMI 409
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYA------ACGNKDDVLRVWKRYKQNLKVYN 328
+ AL V+ E + +R Y+ +I Y A G + +L ++ ++ YN
Sbjct: 410 EDALDVVELMESRNLRPN-TRTYNELIKGYCKRNVHKAMGVLNKMLE--RKVLPDVVTYN 466
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+I + +SA ++ R L D +ID+ C+ + +A L
Sbjct: 467 S----LIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGY 447
+ + PNV + + GY + + + ++K L SK CL L +
Sbjct: 523 LEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKML-----------SKNCLPNSLTF 570
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 132/311 (42%), Gaps = 58/311 (18%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K + +E+A F+ + +K +P+V Y AL++ Y A +A +++++M +
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNC 563
Query: 184 VKKTIDYNSMMNVYYQTGNYK----------KLD---------SLMH------------- 211
+ ++ +N++++ G K K+D L+H
Sbjct: 564 LPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYR 623
Query: 212 ---EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+M G D +T++ + + + +VA M+ + GV D Y++ GY
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMK-ENGVSPDLFTYSSLIKGY 682
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
G ++ A VL++ MH+ +Q+ +L + +Y + +K
Sbjct: 683 GDLGRTNSAFVVLKR-----MHDTGCEP-----SQHTFLSLIKHLLEM--KYGK-VKGGE 729
Query: 329 RGYICVISSLLKFD-GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI- 386
G +CV+S++++FD +E EK+ E + N + L+ C G L AE +
Sbjct: 730 PG-VCVMSNMMEFDIVVELLEKMVEHGVTPN----AKSYEKLMLGICEIGNLRVAEKVFD 784
Query: 387 YKAQLRGTEPN 397
+ Q G P+
Sbjct: 785 HMQQKEGISPS 795
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 278 LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISS 337
+ V+ K +LM+ + S A + NKD+ + +YK + YN +++S
Sbjct: 139 VGVVFKIRLLMIKSCDSVADTLFVLDLCRKMNKDESFEL--KYKLIIGCYNT----LLNS 192
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
L +F ++ ++++ E +C +I N +++ YC+ G + +A + G +P+
Sbjct: 193 LARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPD 252
Query: 398 VRTWYLMATGYLQNNQSEKGVEAMKK 423
T+ + GY Q + + K+
Sbjct: 253 FFTYTSLIMGYCQRKDLDSAFKVFKE 278
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 122/269 (45%), Gaps = 9/269 (3%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+++L+ + K ++ +++DRGL+ NS++ + G ++L + M+
Sbjct: 153 HVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMK 212
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
E GID YT++ L++ + E +K+ +M+ + +V D Y GY KAG
Sbjct: 213 ENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGK-IVPDTVTYNIMIKGYCKAGKL 271
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY----KQNLKVYNRG 330
KA+ R E M + K + + Q AC ++ D Y ++ L++
Sbjct: 272 QKAMEKFRDME--MKNVKPDKITYMTLIQ--ACYSERDFDTCLSLYLEMEERGLEIPPHS 327
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y VI L K A +FE + ++ I LID+Y + G + +A L + +
Sbjct: 328 YSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMK 387
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
G EP+ T+ ++ G ++ + + G+E
Sbjct: 388 NEGFEPDAVTYSVLVNGLCKSGRLDDGME 416
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 133/316 (42%), Gaps = 48/316 (15%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PS+Y L+N + E AE + + M +V T+ YN M+ Y + G +K
Sbjct: 218 PSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEK 277
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+ME K + DK T+ L+ AC + D + + ME +RG+ + Y+ G
Sbjct: 278 FRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEME-ERGLEIPPHSYSLVIGGLC 336
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRA----YDFVITQYAACGNKDDVLRVWKRYKQ--- 322
K +A AV M+ K RA Y +I Y+ G+ ++ +R+++R K
Sbjct: 337 KQRKCMEAYAVFET-----MNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGF 391
Query: 323 ----------------------NLKVY----NRG-------YICVISSLLKFDGMESAEK 349
++++ N+G Y +I L K +E AE
Sbjct: 392 EPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAEN 451
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
+FEE + D N +IDA + G + +A L + + G + V T+ ++ G
Sbjct: 452 LFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLF 511
Query: 410 QNNQSEKGVEAMKKAL 425
+ +++E+ ++ K +
Sbjct: 512 KEHKNEEAIKFWDKMI 527
>gi|15222438|ref|NP_172238.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163930|sp|Q940Q2.1|PPR19_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07590, mitochondrial; Flags: Precursor
gi|15809864|gb|AAL06860.1| At1g07590/F22G5_2 [Arabidopsis thaliana]
gi|332190025|gb|AEE28146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 154/368 (41%), Gaps = 9/368 (2%)
Query: 71 LDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIA 130
L W+ +G P+ + I + R R AL++ W+ ++ + L + + L+
Sbjct: 85 LQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLGELEYSYLLEFTV 144
Query: 131 KVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
K+ G+ Q F VP++ + +Y L+ A A M++MR+ G + Y
Sbjct: 145 KLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYRTSHLVY 204
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA 250
N ++ G K + + M+ T+ IL+ A + +G+ K M+
Sbjct: 205 NRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAFDGMK- 263
Query: 251 DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK 310
GV + Y A + A L A A + E + + +S D ++ Y G +
Sbjct: 264 KAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWS-TLDILMILYGRLGKE 322
Query: 311 DDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
++ R W + V ++ Y+ + + ++ AE+++ E ++ + N L+
Sbjct: 323 KELARTWNVIRGFHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKETEQFNSLL 382
Query: 371 DAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA 430
YC+ GL+ KA + + G +PN T+ +A G + + MK+AL +E
Sbjct: 383 SVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAK-------AKLMKEALKNIEM 435
Query: 431 GTRWKPSK 438
G K SK
Sbjct: 436 GLNLKTSK 443
>gi|302804432|ref|XP_002983968.1| hypothetical protein SELMODRAFT_423071 [Selaginella moellendorffii]
gi|300148320|gb|EFJ14980.1| hypothetical protein SELMODRAFT_423071 [Selaginella moellendorffii]
Length = 598
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 157/351 (44%), Gaps = 16/351 (4%)
Query: 115 FVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEII 174
F + D +++D A V + A FN +P+ K Y +L Y + EKA ++
Sbjct: 125 FEIDDRDYVLQVDYYAHVD-MYLAEMAFNRLPDDKKTEEAYNYILAGYVRNRMLEKAVVV 183
Query: 175 MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAA 234
M ++R+ GLV M +++ G +++ +L+ E G+ + + L
Sbjct: 184 MDKIRELGLV-SAFSLEQMTLLFHYLGLERRIPALVVEARSLGLHFHPHFLNTHLWIKRR 242
Query: 235 ASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
D G+++IV +E G WT Y AS Y++AG +KA A L +E + + +F
Sbjct: 243 HGDLSGMEEIVEELEL-MGRSNAWT-YIFIASAYIQAGFPEKAHAALGAAEAGIRNGRFK 300
Query: 295 ---RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
+ Y+ ++ Y + + + RVW V ++ +I +L + AE+IF
Sbjct: 301 KQRKVYNKILLLYGLLKDMEGIERVWGILNSRPLVAVHNHLFMIEALGSAGNIGRAEEIF 360
Query: 352 EEWES-RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR-GTEPNVRTWYLMATGYL 409
EE R + + R + AY + GL+ KA ++Y + P ++ GY+
Sbjct: 361 EELRKCRGVRKEYRQFIVMAGAYTKNGLMDKATEVLYDYPAKYKARPVPELYHYFIKGYI 420
Query: 410 QNNQSEKGVEAMKKALVLLEAGTRWKPSK---ECLAACLGYYKKERDIEGA 457
+ N+ + +EA ++ L+ R++ +K E + + Y + D+ A
Sbjct: 421 KRNEKDWAIEAYEEGQSLV----RYRSTKLWYETMLEVMSIYAERGDVTSA 467
>gi|302776756|ref|XP_002971525.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
gi|300160657|gb|EFJ27274.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
Length = 356
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 121/249 (48%), Gaps = 11/249 (4%)
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
+++ RG+ YN ++ + + G+ K++ ++ EM + + D ++F+ L++A A +
Sbjct: 88 EIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAMSR 147
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA 296
E ++ + M+A GV+ D Y T + ++ + +A+ + + V F
Sbjct: 148 KPERGLQVFSNMKA-AGVLPDIVTYTTLIQMFSRSAMHKEAIEMFEEMVVNKCQPDFF-V 205
Query: 297 YDFVITQYAACGNKDDVLRVWKR-----YKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
Y +++ Y G D L ++ R ++ N+ Y +IS+ L +E + K F
Sbjct: 206 YSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYT----SLISAHLHKGLLEESRKHF 261
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
+ E+ D+ + N +IDAY + G+++ A L+++ +G PN ++ ++ G+L
Sbjct: 262 SQMEAYGCRADVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVCPNRASYAIIVEGFLHA 321
Query: 412 NQSEKGVEA 420
++ + A
Sbjct: 322 GHVDEALAA 330
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 11/231 (4%)
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
YN+M+ YYQ K + ++M +GID D T+ IL+S + +G ID++ ++
Sbjct: 33 YNAMIAAYYQAKRPKDAWDVYYQMLAEGIDPDDVTYDILVS--GSGKNGYPIDRLFLEIK 90
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAA 306
+ RGV L Y + K G DK V+R+ M+ + +++ +I YA
Sbjct: 91 S-RGVALTLRSYNVVICAFTKEGSIDKVEEVIRE----MIRQELRPDLFSFNALIAAYAM 145
Query: 307 CGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
+ L+V+ K + + Y +I + + A ++FEE D +
Sbjct: 146 SRKPERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSAMHKEAIEMFEEMVVNKCQPDFFV 205
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ L+ Y + GL+ A + ++ QL G PN+ T+ + + +L E+
Sbjct: 206 YSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEE 256
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 5/136 (3%)
Query: 144 CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
C P+ VY L++ Y A A +I +++ G + Y S+++ + G
Sbjct: 199 CQPDFF----VYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLL 254
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYAT 263
++ +ME G D + + ++ A A A ++ + A +GV + YA
Sbjct: 255 EESRKHFSQMEAYGCRADVHLLNTMIDAYAKAGMVNDAANLLHRLTA-QGVCPNRASYAI 313
Query: 264 AASGYVKAGLSDKALA 279
G++ AG D+ALA
Sbjct: 314 IVEGFLHAGHVDEALA 329
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 110/249 (44%), Gaps = 3/249 (1%)
Query: 176 QQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAA 235
++M++ G+ YN +MN + + G K L EM E+G+ C+ T++ L+
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 236 SDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR 295
+K++ M++D G+ + Y T G+ G KAL++ R + +
Sbjct: 317 MKANEANKVMDQMKSD-GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLV- 374
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
Y+ +++ + G+ +V K ++ +K Y +I + + D ME A ++
Sbjct: 375 TYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPM 434
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
E L D+ + LI +C +G +++A L + EPN + M GY + S
Sbjct: 435 EELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSS 494
Query: 415 EKGVEAMKK 423
+ + ++
Sbjct: 495 YRALRLFRE 503
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 137/325 (42%), Gaps = 52/325 (16%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y ++NAY ++S + + +M D+G V + +N+++ + ++ + +E
Sbjct: 96 LYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNES 155
Query: 214 EEKGIDCDKYTFSILLSACAAASDGE-GIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ K +D D Y+F I++ C A + E D +V + E G + +Y T G K G
Sbjct: 156 KIK-VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREF--GFSPNVVIYTTLIDGCCKRG 212
Query: 273 LSDKA-----------LAVLRKSEVLMMHNKFSRA-----------------------YD 298
+KA L + +++H F Y+
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYN 272
Query: 299 FVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNRGYICVISSLLKFDGMESAEKIFEE 353
V+ Q+ G D +++ ++ N+ YN +I L + A K+ ++
Sbjct: 273 CVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNT----LIGGLCREMKANEANKVMDQ 328
Query: 354 WESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
+S + ++ N LID +C G L KA +L + RG P++ T+ ++ +G+ +
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGD 388
Query: 414 SEKGVEAMKKALVLLEAGTRWKPSK 438
+ + +K+ + E G KPSK
Sbjct: 389 TSGAGKVVKE---MEERGI--KPSK 408
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 11/249 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+ A +A +M QM+ G+ I YN++++ + G K SL ++
Sbjct: 305 TYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ +G+ T++IL+S D G K+V ME +RG+ Y + +
Sbjct: 365 KSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME-ERGIKPSKITYTILIDTFARMDN 423
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVYN 328
+KA+ + E L + Y +I + G ++ R++ K+ + N +YN
Sbjct: 424 MEKAIQLRSPMEELGLTPDV-HTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYN 482
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
++ K A ++F E E + L ++ ++I+ C+ +AE L+ K
Sbjct: 483 T----MVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEK 538
Query: 389 AQLRGTEPN 397
G +P+
Sbjct: 539 MIDTGIDPS 547
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 122/274 (44%), Gaps = 10/274 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+ Y C + KA ++ +M +R ++ + YNS+++ ++GN+ L+ M
Sbjct: 430 TYNELIKGY-CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 214 EEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
++G+ D++T+ S++ S C + E D ++ + +GV + +Y GY KAG
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ--KGVNPNVVMYTALIDGYCKAG 546
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN---KDDVLRVWKRYKQNLKVYNR 329
D+A +L K ++ N + F + C + K+ L K K L+
Sbjct: 547 KVDEAHLMLEK---MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS 603
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
+I LLK + A F++ S D I YCR G L AE ++ K
Sbjct: 604 TDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM 663
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ G P++ T+ + GY Q+ + +K+
Sbjct: 664 RENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 156/397 (39%), Gaps = 40/397 (10%)
Query: 46 KGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQI 105
+ SM +R+LS + PN P L V P + L F L AL
Sbjct: 56 ESDSMSVPHRLLSILSKPNWHKSPSLKSMVSAISPSHVSSL------FSLDLDPKTALNF 109
Query: 106 SMWMTKKSNFVLTPADVA-----------------IRLDLIAKVQGIEQAASYFNCV--- 145
S W+++ + + A IRL +I + A +
Sbjct: 110 SHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKM 169
Query: 146 --PEKLKLP-----SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYY 198
E+ +L Y LLN+ A ++ + + +M + + YN M+N Y
Sbjct: 170 NKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYC 229
Query: 199 QTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDW 258
+ GN ++ + + ++ E G+D D +T++ L+ D + K+ M +G +
Sbjct: 230 KLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL-KGCRRNE 288
Query: 259 TVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN--KDDVLRV 316
Y G A D+A+ + K + F + + + CG+ K + L +
Sbjct: 289 VAYTHLIHGLCVARRIDEAMDLFVK---MKDDECFPTVRTYTVLIKSLCGSERKSEALNL 345
Query: 317 WKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
K ++ +K Y +I SL E A ++ + + L ++ N LI+ YC+
Sbjct: 346 VKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCK 405
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
RG++ A ++ + R PN RT+ + GY ++N
Sbjct: 406 RGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN 442
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 146/338 (43%), Gaps = 48/338 (14%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K Q I++A F + +K P Y +++ A+S ++AE + QQM D+G+
Sbjct: 337 IDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGV 396
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS-ACAAASDGEGID 242
YN +++ Y TG ++++ + EM ++ D +T+ +LL C E
Sbjct: 397 KPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARS 456
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDF 299
+M+ +G+ T+Y GY K G AL+ + LM+ N S R ++
Sbjct: 457 LFDSMIR--KGIKPSVTIYGIMLHGYGKKG----ALSEMHDLLNLMVANGISPNHRIFNT 510
Query: 300 VITQYAACGNKDDVLRVWKRYKQ-----NLKVY------------------------NRG 330
VI YA D+V+ ++ + KQ N+ Y N G
Sbjct: 511 VICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEG 570
Query: 331 -------YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
+ ++ L D E E++F E ++ + DI N ++ C+ G + +A
Sbjct: 571 VTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEAR 630
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
LI G +P+V ++ + G+ ++ ++ V+ +
Sbjct: 631 RLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLL 668
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 167/409 (40%), Gaps = 24/409 (5%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA- 123
++M LL Q E G L + ++K +R A ++ M + +P V+
Sbjct: 137 EAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSY 196
Query: 124 -IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRD 180
I ++ +++A S F E P V Y +++ A+ ++AE + QQM +
Sbjct: 197 NIVINGFFNEGQVDKAYSLF---LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVE 253
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
+G+ + YN++++ + + + +M +KG+ T++ ++ A +
Sbjct: 254 KGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDR 313
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----A 296
+ + M DRGV D Y T G KA DKA V ++ M +K +
Sbjct: 314 AEGVFQQM-IDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQ-----MIDKGVKPDNLT 367
Query: 297 YDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
Y +I + D V+++ + +K N Y C+I L E + +E
Sbjct: 368 YTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMS 427
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+ +L D+ L+D C+ G ++A +L +G +P+V + +M GY +
Sbjct: 428 AHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGY-----GK 482
Query: 416 KGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDI-EGADYFIKL 463
KG + L+ L P+ + Y K I E FIK+
Sbjct: 483 KGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKM 531
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 145/341 (42%), Gaps = 26/341 (7%)
Query: 74 WVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LDLIAK 131
++E G D+ II + A + M +K + P +V +D + K
Sbjct: 216 FLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKG---VKPNNVTYNTIIDGLCK 272
Query: 132 VQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
Q ++ A F + +K PS Y +++ A++ ++AE + QQM DRG+ +
Sbjct: 273 AQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVT 332
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
YN++++ + K + + +M +KG+ D T++I++ A + + + M
Sbjct: 333 YNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQM- 391
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN 309
D+GV + Y GY+ G ++ V+++ + + H+ + + + C N
Sbjct: 392 IDKGVKPNNGTYNCLIHGYLSTGQWEE---VVQRIKEMSAHDLEPDVFTYGLLLDYLCKN 448
Query: 310 K---------DDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
D ++R K K ++ +Y ++ K + + + +
Sbjct: 449 GKCNEARSLFDSMIR--KGIKPSVTIYG----IMLHGYGKKGALSEMHDLLNLMVANGIS 502
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+ RI N +I AY +R ++ + + K + +G PNV T+
Sbjct: 503 PNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTY 543
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 129/301 (42%), Gaps = 19/301 (6%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K+ ++ A FN + + P+ V+ +L+ EK E + +M ++G+
Sbjct: 547 IDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGI 606
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGID 242
+ +N+++ + G + L+ M G+ D +++ L+ C A+ E +
Sbjct: 607 RPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVK 666
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDF 299
+ M+ A G+ + Y T GY KAG D A + R+ M+ + Y+
Sbjct: 667 LLDGMVSA--GLKPNIVSYNTLLHGYCKAGRIDNAYCLFRE----MLRKGVTPGVETYNT 720
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLL----KFDGMESAEKIFEEWE 355
++ G + ++ ++ K+++ IC S +L K + + A KIF+
Sbjct: 721 ILNGLFRSGRFSEARELYVNMIKSRKLWS---ICTYSIILDGFCKNNCFDEAFKIFQSLC 777
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
S +L DI N +ID + G A L G P+V T+ L+A ++ E
Sbjct: 778 SMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLE 837
Query: 416 K 416
+
Sbjct: 838 E 838
>gi|302798915|ref|XP_002981217.1| hypothetical protein SELMODRAFT_420704 [Selaginella moellendorffii]
gi|300151271|gb|EFJ17918.1| hypothetical protein SELMODRAFT_420704 [Selaginella moellendorffii]
Length = 541
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 154/362 (42%), Gaps = 45/362 (12%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRL 126
+V L W EG + + + +I + + +++ W+ + F LT D +R+
Sbjct: 125 IVAALKDWQSEGNLVTRDVIYKLIIRLHARMFYFQGMKLMNWVIVEKPFQLTDFDHLVRM 184
Query: 127 DLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
D + +++ + FN + +K + + Y+ LL A+A A E+A +++QM++ L+
Sbjct: 185 DFHTRELKVDKVLTCFNRIQDKTE--TCYVLLLQAFATAHRKERALDVLKQMKELVLITN 242
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG-IDCDKYTFSILLSACAAASDGEGIDKIV 245
+ YN ++ +Y + G + + E+++K + D +T+ LL + D G+D +
Sbjct: 243 SYSYNLVIAMYLRMGLIDEAKEMFAELKDKSNVAPDAFTYLNLLK----SRDALGMDDLE 298
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF--VITQ 303
+E E + +K +++ +I
Sbjct: 299 DTIE-----------------------------------EFFLDVDKIPTGFEWRNLIRL 323
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDG-MESAEKIFEEWESRNLCHD 362
Y A G K DV R+W+ K+ + Y +G M+ E+I ++ E++N
Sbjct: 324 YGAMGKKKDVERLWREQKRVAEYMPESYFLAAIESFGMNGEMKQFEEICKQLEAQNQKLS 383
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
R ++ YC GL++ AE K + + + ++ + +GY+ +Q K E
Sbjct: 384 ERQCFTMLKVYCMNGLMNDAERTAKKMEELRYKLGFKGYHYLVSGYVNRHQFVKATEKFS 443
Query: 423 KA 424
+A
Sbjct: 444 EA 445
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 147/342 (42%), Gaps = 15/342 (4%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA- 123
++M LL + E G D I++K KR AL++ M P V+
Sbjct: 143 EAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSY 202
Query: 124 -IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRD 180
I ++ +++ + F + ++ P V Y +++ A+ ++AE + QQM D
Sbjct: 203 SIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMID 262
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS-ACAAASDGE 239
G YN +++ Y G +K++ ++ EM +G+ D YT+ LL+ C E
Sbjct: 263 NGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCRE 322
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RA 296
+M+ +G+ + Y GY G AL+ + LM+ N S
Sbjct: 323 ARFFFDSMIR--KGIKPKVSTYGILIHGYATKG----ALSEMHSFLDLMVENGLSPDHHI 376
Query: 297 YDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
++ + YA CG D + ++ + +Q+ L Y +I +L K ++ AE F +
Sbjct: 377 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 436
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
+ + +I + N L+ C +AE L+Y+ +G PN
Sbjct: 437 NEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPN 478
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 94/246 (38%), Gaps = 39/246 (15%)
Query: 166 KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM-EEKGIDCDKYT 224
+ E ++++Q+M + G + T+ Y ++ ++ L+H M ++ G C
Sbjct: 140 RVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNV 199
Query: 225 FSILLSACAAASDGEGIDKIVAMM--EADRGVVLDWTVYATAASGYVKAGLSDKALAVLR 282
S + ++G+ +DK + DRG+ D Y T G KA L D+A V +
Sbjct: 200 VSYSIVINGFFTEGQ-VDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQ 258
Query: 283 KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFD 342
+ M+ N F K N YN C+I L
Sbjct: 259 Q----MIDNGF---------------------------KPNNYTYN----CLIHGYLSIG 283
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
+ ++ EE +R L D L++ C+ G +A +G +P V T+
Sbjct: 284 KWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYG 343
Query: 403 LMATGY 408
++ GY
Sbjct: 344 ILIHGY 349
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y LL+ Y A + A + ++M +G+ + YN++++ +QT + + L M
Sbjct: 551 TYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM 610
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVKA 271
G CD YT++I+L+ ++ +D+ M ++ +G+ L+ + +K
Sbjct: 611 INSGTKCDIYTYNIILNGLCKSN---CVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKG 667
Query: 272 GLSDKAL 278
G + A+
Sbjct: 668 GRKEDAM 674
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 68/370 (18%), Positives = 135/370 (36%), Gaps = 43/370 (11%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTP--ADVAI 124
M LD VE G D I + A+ I M + L+P +
Sbjct: 358 MHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG---LSPNVVNYGA 414
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRG 182
+D + K+ ++ A FN + + P++ + +L+ E+AE ++ +M D+G
Sbjct: 415 LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG 474
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ + +N+++ G + L+ ME G+ D ++++ L+S + +
Sbjct: 475 ICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAE 534
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS----------------EV 286
K+ M G+ Y T GY A D A + R+
Sbjct: 535 KVFDGM-VSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHG 593
Query: 287 LMMHNKFSRA------------------YDFVITQYAACGNKDDVLRVWKRY-KQNLKVY 327
L +FS A Y+ ++ D+ ++++ + L++
Sbjct: 594 LFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLN 653
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
+ +I +LLK E A +F + L ++ + + G L + ++L
Sbjct: 654 IITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFS 713
Query: 388 KAQLRGTEPN 397
+ GT PN
Sbjct: 714 AMEKNGTAPN 723
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 110/283 (38%), Gaps = 45/283 (15%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++ +AYA +KA I +MR GL ++Y ++++ + G + ++M
Sbjct: 376 IFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM 435
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG- 272
+G+ + F+ L+ E +++V M D+G+ + + T G
Sbjct: 436 INEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEM-LDQGICPNAVFFNTLICNLCNVGR 494
Query: 273 -LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
+ + L L + V + + FS Y +I+ Y G D+ +V
Sbjct: 495 VMEGRRLIDLME-HVGVRPDAFS--YTPLISGYCLTGRTDEAEKV--------------- 536
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
FDGM S E L H + + DAYC +++ L
Sbjct: 537 ---------FDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYC-----------LFREML 576
Query: 392 R-GTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTR 433
R G P V T+ + G Q+++ EA + L ++ +GT+
Sbjct: 577 RKGVTPGVVTYNTILHGLF---QTKRFSEAKELYLNMINSGTK 616
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 157/373 (42%), Gaps = 36/373 (9%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNF--VLTPADVA---- 123
LL+ ++ G LD+ ++K + R S A Q+ + M K V+T A +
Sbjct: 550 LLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLC 609
Query: 124 ----IRLDLIAKVQGIEQAASY-FNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQM 178
I++ L + + Y NC P + S I + C + E E+ ++M
Sbjct: 610 QSGNIKIALELHKNMLSDTSPYGINCKPNAI---SYSIIIDGLCKCGREDEAREL-FKEM 665
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASD 237
+ G++ I Y S+++ + ++G +K L +EM + G+ D TFS+L+ C
Sbjct: 666 KALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKV 725
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY 297
E + + M++ RG + + Y T G ++D+ + +++ M K
Sbjct: 726 IEANELLEVMIQ--RGCIPNTVTYTTLVKGLC---MNDR---ISEATQLFMKMQKLGCLP 777
Query: 298 DFV-----ITQYAACGNKDDVLRVWKR-------YKQNLKVYNRGYICVISSLLKFDGME 345
D V + GN L + K+ Y N K Y +I L K +
Sbjct: 778 DVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGRED 837
Query: 346 SAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
A ++F+E ++ + ++ LI +CR G L A+ L + +G + N T+ +M
Sbjct: 838 EARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMI 897
Query: 406 TGYLQNNQSEKGV 418
G+ + Q +K +
Sbjct: 898 HGFCKEGQIDKAL 910
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 146/356 (41%), Gaps = 30/356 (8%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKS------------NFVL 117
LL+ ++ G LD+ +IK + R S A + M M K +
Sbjct: 369 LLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLC 428
Query: 118 TPADVAIRLDLIAKVQGIEQAASY-FNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQ 176
++ I L L ++ + Y C P + Y +++ + ++A + +
Sbjct: 429 QTGNINIALQLHQEM--LNDTGRYGIKCKPTLIS----YSIIIDGLCKDRREDEARELFE 482
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
+M+ +G++ I Y ++++ + +G ++K L +EM + GI D T S+L+
Sbjct: 483 EMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKG 542
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGY-VKAGLSDKALAVLRKSEVLMMHNKFSR 295
+K++ ++ RG +LD T G +K +S L+ ++ M N +
Sbjct: 543 KVIEANKLLEVV-IQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTC 601
Query: 296 AYDFVITQYAACGNKDDVLRVWKR-------YKQNLKVYNRGYICVISSLLKFDGMESAE 348
A ++ GN L + K Y N K Y +I L K + A
Sbjct: 602 AT--LMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAR 659
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
++F+E ++ + D+ LI +CR G A+ L + G +P+V T+ ++
Sbjct: 660 ELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVL 715
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 75/372 (20%), Positives = 139/372 (37%), Gaps = 45/372 (12%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKS------------NFVL 117
LL+ ++ G LD+ +IK + R S A + M M K +
Sbjct: 76 LLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLC 135
Query: 118 TPADVAIRLDLIAKVQGIEQAASY-FNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQ 176
++ I L L ++ + Y C P + Y +++ + ++A + +
Sbjct: 136 QTGNINIALQLHQEM--LNDTGRYGIKCKPTLIS----YSIIIDGLCKDRREDEARELFK 189
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAA 235
+M+ +G++ I Y S+++ + +G ++K L +EM + GI D T +L+ C
Sbjct: 190 EMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEG 249
Query: 236 SDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF-- 293
E + + M+ RG +LD Y+T G +A +++ M K
Sbjct: 250 KVIEANELLEVMVH--RGCILDIVTYSTLIKGLCMKHRISEA------TQLFMSMKKLGC 301
Query: 294 ---SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV----------ISSLLK 340
+ AY ++ G + L + + + Y G C+ I L K
Sbjct: 302 RPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQY--GIKCIRPDVTTSSMLIDILCK 359
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
+ A ++ E R DI + LI C + +A L Q G P+ T
Sbjct: 360 EGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAIT 419
Query: 401 WYLMATGYLQNN 412
+ + G Q
Sbjct: 420 YGTLMKGLCQTG 431
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 119/271 (43%), Gaps = 43/271 (15%)
Query: 168 AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSI 227
+ AE ++++M ++G+V T+ Y ++++ + + GN + L EME++ I D ++
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 228 LLSACAAASDGEGIDKIVAMMEAD--------RGVVLDWTVYATAASGYVKAGLSDKALA 279
++ G+ + MMEAD RGV D Y T GY K+G +KA +
Sbjct: 121 VIC---------GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFS 171
Query: 280 VLRKSEVLMMHNKFSRA--------YDFVITQYAACGNKDDVLRVW-----KRYKQNLKV 326
+HN+ ++ Y + G D + K + N+
Sbjct: 172 ---------LHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICT 222
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
YN +++ L K + A K+ EE E + D L+DAYC+ G + KA L+
Sbjct: 223 YNS----LVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELL 278
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ RG +P V T+ ++ G+ + E G
Sbjct: 279 REMLDRGLQPTVITFNVLMNGFCMSGMLEDG 309
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 103/247 (41%), Gaps = 38/247 (15%)
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILLSACAAAS 236
M+ RG + Y++++N Y G +K+ L+ EM+ KG+ + YT+ SI+L C +
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA 296
+ + M+ ++G+V D VY T G+ K G A + + E K
Sbjct: 61 VDDAERVLREMI--NQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEME------KQRIV 112
Query: 297 YDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWES 356
DF+ Y VI L + M A+K+F + S
Sbjct: 113 PDFI-----------------------------AYTAVICGLCRCGKMMEADKVFNKMFS 143
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
R + D LID YC+ G + KA +L + G PNV T+ +A G + Q +
Sbjct: 144 RGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDT 203
Query: 417 GVEAMKK 423
E + +
Sbjct: 204 ANELLHE 210
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 38/258 (14%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++ Y + EKA + QM GL + Y ++ + + G + L+HEM
Sbjct: 152 TYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEM 211
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
KG+ + T++ L++ + + K++ ME G+ D + T Y K G
Sbjct: 212 CGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEV-AGMYPDTITFTTLMDAYCKTGE 270
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
KA +LR+ M+ VIT V G+
Sbjct: 271 MVKAHELLRE----MLDRGLQPT---VIT---------------------FNVLMNGF-- 300
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL-R 392
+S +L E E++ + + + N L+ YC R + + T IYK R
Sbjct: 301 CMSGML-----EDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNM-RCTTEIYKGMCAR 354
Query: 393 GTEPNVRTWYLMATGYLQ 410
G P+ T+ ++ G+ +
Sbjct: 355 GVMPDSNTYNILIKGHCK 372
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 5/151 (3%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D K +E+A S N + + P+V Y AL + + A ++ +M +GL
Sbjct: 157 IDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGL 216
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGID 242
YNS++N ++GN ++ LM EME G+ D TF+ L+ A C + +
Sbjct: 217 QLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHE 276
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ M+ DRG+ + +G+ +G+
Sbjct: 277 LLREML--DRGLQPTVITFNVLMNGFCMSGM 305
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 143/319 (44%), Gaps = 30/319 (9%)
Query: 98 RFSHALQISMWMTKKSNF--VLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPS-- 153
+ + AL+I M + F VLT V I +D + K Q +E+A S F + +K+ P+
Sbjct: 419 KLNAALEIRDDMERAGLFPNVLT---VNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAV 475
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+ +L++ + A + ++M D G V I Y S++ +++ G + + EM
Sbjct: 476 TFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEM 535
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
G D + + A + E + + A G + D Y+ G VKAGL
Sbjct: 536 VHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINA-HGFIPDARSYSILIHGLVKAGL 594
Query: 274 SDKAL----AVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK--QNLKVY 327
+++ A+ + VL H AY+ VI + G +V K Y+ + +KV
Sbjct: 595 ANETYELFYAMKEQGCVLDTH-----AYNAVIDGFCKSG------KVNKAYQLLEEMKVK 643
Query: 328 NRG-----YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
Y VI L K D ++ A +FEE +S + ++ + + LID + + G + +A
Sbjct: 644 GHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEA 703
Query: 383 ETLIYKAQLRGTEPNVRTW 401
++ + +G PNV TW
Sbjct: 704 YLIMEELMQKGLTPNVYTW 722
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 10/256 (3%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y L+ A + + + I+ QM++ G + +++ V+ + G SL+ E
Sbjct: 196 SAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDE 255
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M+ +D D +++ + A + K M++ G++ D Y + KA
Sbjct: 256 MKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKS-HGLMPDDVTYTSMIGVLCKAN 314
Query: 273 LSDKALAVLRKSEVLMMHNK---FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
D+A+ + + E N+ + AY+ +I Y + G D+ + +R K + +
Sbjct: 315 RLDEAVELFEQLE----QNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSV 370
Query: 330 -GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y C+++ L K +E A +IFEE + R+ ++ N LID CR G L+ A +
Sbjct: 371 IAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAALEIRDD 429
Query: 389 AQLRGTEPNVRTWYLM 404
+ G PNV T +M
Sbjct: 430 MERAGLFPNVLTVNIM 445
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 139/363 (38%), Gaps = 47/363 (12%)
Query: 86 LRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LDLIAKVQGIEQAASYFN 143
+ I+I + ++ A I M K V TP V +D + K ++ A S +
Sbjct: 442 VNIMIDRLCKAQKLEEACSIFEGMDDK---VCTPNAVTFSSLIDGLGKCGRVDDAYSLYE 498
Query: 144 CVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
+ + +P VY +L+ ++ E I ++M G N+ M+ ++ G
Sbjct: 499 KMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAG 558
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS-DGEGIDKIVAMMEADRGVVLDWTV 260
+K +L E+ G D ++SIL+ A E + AM E +G VLD
Sbjct: 559 ETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKE--QGCVLDTHA 616
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
Y G+ K+G +KA +L + +V H Y VI A D+ +++
Sbjct: 617 YNAVIDGFCKSGKVNKAYQLLEEMKV-KGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 675
Query: 321 KQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL-------------------- 359
K N +K+ Y +I K ++ A I EE + L
Sbjct: 676 KSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 735
Query: 360 -----CH----DIRIPNH------LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
C D++ P + LI+ CR +KA + Q G +PN T+ M
Sbjct: 736 NEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTM 795
Query: 405 ATG 407
+G
Sbjct: 796 ISG 798
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 108/254 (42%), Gaps = 2/254 (0%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++ L+ +A + A ++ +M+ L + YN ++ + + G HEM
Sbjct: 232 LFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEM 291
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ G+ D T++ ++ A+ + ++ +E +R V + Y T GY AG
Sbjct: 292 KSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYA-YNTMIMGYGSAGK 350
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
D+A +L + + AY+ ++T ++ LR+++ K++ Y
Sbjct: 351 FDEAYGLLERQKAKGSIPSVI-AYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNI 409
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+I L + + +A +I ++ E L ++ N +ID C+ L +A ++ +
Sbjct: 410 LIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV 469
Query: 394 TEPNVRTWYLMATG 407
PN T+ + G
Sbjct: 470 CTPNAVTFSSLIDG 483
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 114/292 (39%), Gaps = 41/292 (14%)
Query: 148 KLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
K +PSV Y +L + E+A I ++M+ R V YN ++++ + G
Sbjct: 364 KGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNA 422
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAA 265
+ +ME G+ + T +I++ A E I M+ D+ + +++
Sbjct: 423 ALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMD-DKVCTPNAVTFSSLI 481
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY----- 320
G K G D A ++ K + H + Y +I + CG K+D +++K
Sbjct: 482 DGLGKCGRVDDAYSLYEKM-LDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGC 540
Query: 321 KQNLKVYN-------------------------------RGYICVISSLLKFDGMESAEK 349
+L + N R Y +I L+K +
Sbjct: 541 SPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYE 600
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+F + + D N +ID +C+ G ++KA L+ + +++G P V T+
Sbjct: 601 LFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTY 652
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 108/239 (45%), Gaps = 15/239 (6%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y ++++ A ++A ++ ++ + G+ + Y+S+++ + + G + +
Sbjct: 647 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLI 706
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASG 267
M E+ +KG+ + YT++ LL A A E I++ + ++ D + Y+ +G
Sbjct: 707 MEELMQKGLTPNVYTWNCLLDALVKA---EEINEALICFQSMKDLKCPPNQITYSILING 763
Query: 268 YVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
+ +KA ++ + L + + Y +I+ A GN + ++ R+K N +
Sbjct: 764 LCRVRKFNKAFVFWQEMQKLGLKPN-TITYTTMISGLAKAGNILEASGLFSRFKANGGIP 822
Query: 328 NRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+ Y +I L + A +FEE + + L+DA LHKAE L
Sbjct: 823 DSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDA------LHKAECL 875
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 131/301 (43%), Gaps = 41/301 (13%)
Query: 163 ACAKSA--EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
AC + ++A +++ G V T YNS++ V+ + G Y + S++ EME+
Sbjct: 289 ACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPP 348
Query: 221 DKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALA 279
D T++ L++A A EG D I M+ +G++ + Y T + Y KAG DKAL+
Sbjct: 349 DLVTYNELVAAYVRAGFHEEGADFIDTMIR--KGIMPNAITYTTVINAYGKAGKEDKALS 406
Query: 280 VLRK-------------SEVLMMHNKFSRAYDFV------------------ITQYAACG 308
R+ + +L M K SR + + T A CG
Sbjct: 407 FFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCG 466
Query: 309 NKDD---VLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
NK V RV++ K NR + +I + + K++EE +
Sbjct: 467 NKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVT 526
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
N L++A RRG AE++I + +G +PN ++ LM Y + +G+E +++
Sbjct: 527 TYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNG-RGIEKIEEE 585
Query: 425 L 425
+
Sbjct: 586 I 586
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 151/346 (43%), Gaps = 48/346 (13%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEM 213
+ +L+AY+ E+A + ++MR GL + YN M++VY + G ++ K+ L+ EM
Sbjct: 212 WTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEM 271
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
G++ D++T S ++SAC + K A ++++ G V Y + + KAG+
Sbjct: 272 RSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSE-GYVAGTFTYNSLLQVFGKAGI 330
Query: 274 SDKALAVLRKSEV------LMMHNKFSRAY----------DF------------------ 299
+AL++L++ E L+ +N+ AY DF
Sbjct: 331 YSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTT 390
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMES--AEKIFEEWESR 357
VI Y G +D L +++ K++ V N +C +++L G +S E I + R
Sbjct: 391 VINAYGKAGKEDKALSFFRQMKESGCVPN---VCTYNAILGMLGKKSRLEEMIDMLCDMR 447
Query: 358 -NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR-GTEPNVRTWYLMATGYLQNNQSE 415
N C + + + A C +HK +++ G EPN T+ + Y +
Sbjct: 448 SNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAY---GRCG 504
Query: 416 KGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFI 461
++ +K +++AG + P A L + D E A+ I
Sbjct: 505 SQIDVVKMYEEMIKAG--FTPCVTTYNALLNALARRGDWEAAESVI 548
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 133/303 (43%), Gaps = 31/303 (10%)
Query: 136 EQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
++A S+F + E +P+V Y A+L E+ ++ MR G ++ +N+M
Sbjct: 402 DKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTM 461
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--D 251
+ + G +K ++ + EM+ G + ++ TF+ L+ A G ID +V M E
Sbjct: 462 LAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRC--GSQID-VVKMYEEMIK 518
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYDFVITQYAAC 307
G T Y + + G + A +V +L M +K + +Y ++ YA
Sbjct: 519 AGFTPCVTTYNALLNALARRGDWEAAESV-----ILDMKSKGFKPNETSYSLMLNCYAKG 573
Query: 308 GNKDDVLRVWKRYKQNLKVYNRGYI--------CVISSLLKFDGMESAEKIFEEWESRNL 359
GN + ++ + ++YN G+I ++ + K + E+ F+E+
Sbjct: 574 GNGRGIEKIEE------EIYN-GHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGY 626
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
D+ + N ++ + + + +A ++ + G +P++ T+ + Y + + KG E
Sbjct: 627 KPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEE 686
Query: 420 AMK 422
+K
Sbjct: 687 ILK 689
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 117/283 (41%), Gaps = 33/283 (11%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y ALLNA A E AE ++ M+ +G Y+ M+N Y + GN + ++ + E
Sbjct: 526 TTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEE 585
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR--------GVVLDWTVYATA 264
+ I + ILL A+ K A+M +R G D ++ +
Sbjct: 586 IYNGHI----FPSWILLRTLVLAN-----FKRRALMGMERAFQEFCKHGYKPDLVLFNSM 636
Query: 265 ASGYVKAGLSDKA---LAVLRKSEV---LMMHNKFSRAYDFVITQYAACGNKDDVLRVWK 318
S + K + D+A L ++R+S + L+ +N Y + C +++L+ +
Sbjct: 637 LSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMY----ARGGECWKGEEILKGIQ 692
Query: 319 RY--KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRR 376
+ K +L YN VI + M+ A + E + I N + Y +
Sbjct: 693 KSGGKPDLVSYN----TVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGK 748
Query: 377 GLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
G+ + E +I PN T+ ++ GY + + ++ ++
Sbjct: 749 GMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMD 791
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 131/301 (43%), Gaps = 41/301 (13%)
Query: 163 ACAKSA--EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
AC + ++A +++ G V T YNS++ V+ + G Y + S++ EME+
Sbjct: 289 ACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPP 348
Query: 221 DKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALA 279
D T++ L++A A EG D I M+ +G++ + Y T + Y KAG DKAL+
Sbjct: 349 DLVTYNELVAAYVRAGFHEEGADFIDTMIR--KGIMPNAITYTTVINAYGKAGKEDKALS 406
Query: 280 VLRK-------------SEVLMMHNKFSRAYDFV------------------ITQYAACG 308
R+ + +L M K SR + + T A CG
Sbjct: 407 FFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCG 466
Query: 309 NKDD---VLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
NK V RV++ K NR + +I + + K++EE +
Sbjct: 467 NKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVT 526
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
N L++A RRG AE++I + +G +PN ++ LM Y + +G+E +++
Sbjct: 527 TYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNG-RGIEKIEEE 585
Query: 425 L 425
+
Sbjct: 586 I 586
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 151/346 (43%), Gaps = 48/346 (13%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEM 213
+ +L+AY+ E+A + ++MR GL + YN M++VY + G ++ K+ L+ EM
Sbjct: 212 WTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEM 271
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
G++ D++T S ++SAC + K A ++++ G V Y + + KAG+
Sbjct: 272 RSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSE-GYVAGTFTYNSLLQVFGKAGI 330
Query: 274 SDKALAVLRKSEV------LMMHNKFSRAY----------DF------------------ 299
+AL++L++ E L+ +N+ AY DF
Sbjct: 331 YSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTT 390
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMES--AEKIFEEWESR 357
VI Y G +D L +++ K++ V N +C +++L G +S E I + R
Sbjct: 391 VINAYGKAGKEDKALSFFRQMKESGCVPN---VCTYNAILGMLGKKSRLEEMIDMLCDMR 447
Query: 358 -NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR-GTEPNVRTWYLMATGYLQNNQSE 415
N C + + + A C +HK +++ G EPN T+ + Y +
Sbjct: 448 SNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAY---GRCG 504
Query: 416 KGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFI 461
++ +K +++AG + P A L + D E A+ I
Sbjct: 505 SQIDVVKMYEEMIKAG--FTPCVTTYNALLNALARRGDWEAAESVI 548
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 133/303 (43%), Gaps = 31/303 (10%)
Query: 136 EQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
++A S+F + E +P+V Y A+L E+ ++ MR G ++ +N+M
Sbjct: 402 DKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTM 461
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--D 251
+ + G +K ++ + EM+ G + ++ TF+ L+ A G ID +V M E
Sbjct: 462 LAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRC--GSQID-VVKMYEEMIK 518
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYDFVITQYAAC 307
G T Y + + G + A +V +L M +K + +Y ++ YA
Sbjct: 519 AGFTPCVTTYNALLNALARRGDWEAAESV-----ILDMKSKGFKPNETSYSLMLNCYAKG 573
Query: 308 GNKDDVLRVWKRYKQNLKVYNRGYI--------CVISSLLKFDGMESAEKIFEEWESRNL 359
GN + ++ + ++YN G+I ++ + K + E+ F+E+
Sbjct: 574 GNGRGIEKIEE------EIYN-GHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGY 626
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
D+ + N ++ + + + +A ++ + G +P++ T+ + Y + + KG E
Sbjct: 627 KPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEE 686
Query: 420 AMK 422
+K
Sbjct: 687 ILK 689
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 117/283 (41%), Gaps = 33/283 (11%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y ALLNA A E AE ++ M+ +G Y+ M+N Y + GN + ++ + E
Sbjct: 526 TTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEE 585
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR--------GVVLDWTVYATA 264
+ I + ILL A+ K A+M +R G D ++ +
Sbjct: 586 IYNGHI----FPSWILLRTLVLAN-----FKRRALMGMERAFQEFCKHGYKPDLVLFNSM 636
Query: 265 ASGYVKAGLSDKA---LAVLRKSEV---LMMHNKFSRAYDFVITQYAACGNKDDVLRVWK 318
S + K + D+A L ++R+S + L+ +N Y + C +++L+ +
Sbjct: 637 LSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMY----ARGGECWKGEEILKGIQ 692
Query: 319 RY--KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRR 376
+ K +L YN VI + M+ A + E + I N + Y +
Sbjct: 693 KSGGKPDLVSYN----TVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGK 748
Query: 377 GLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
G+ + E +I PN T+ ++ GY + + ++ ++
Sbjct: 749 GMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMD 791
>gi|125602283|gb|EAZ41608.1| hypothetical protein OsJ_26140 [Oryza sativa Japonica Group]
Length = 524
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 154/351 (43%), Gaps = 2/351 (0%)
Query: 74 WVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQ 133
W+ +GR + + + + R + ALQ+ W+ ++ + L+ D + L+ AKV
Sbjct: 71 WMGDGRAVHRGHVFHAVNRLRRRRLHRAALQVMEWIMRERPYKLSELDYSYLLEFTAKVH 130
Query: 134 GIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
GI +A S F +P++ + +Y L+ A + A ++MR+ L YN +
Sbjct: 131 GISEAESLFLRIPQEYQNELLYNNLVMACLDLGLIKLAYGYKRKMRELSLPISPYVYNRL 190
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
+ ++ G K + ++ +M+ + T++ILL A + +G+ ++ M+ +
Sbjct: 191 IILHSSPGRQKTISKILAQMKGDRVTPHTSTYNILLKIKANEHNIDGVARVFNDMKRAK- 249
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDV 313
V + Y A + A L + + E M +S + ++ Y G ++
Sbjct: 250 VEPNEITYGILAIAHAVARLYTVSHTYVEAIENSMTGTNWS-TLEILLILYGYHGKAKEL 308
Query: 314 LRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAY 373
W + + + +I I + K ++ AE+I+ ++ES N ++ Y
Sbjct: 309 KMTWDLMQGLPHIRPKSFILAIEAFGKVGSIDQAEEIWGKFESTRKPKLTEQFNSILSVY 368
Query: 374 CRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
CR GL+ KA + + + G +PN T+ + G L+ ++ ++ M A
Sbjct: 369 CRHGLVDKASAVFKEMRANGCQPNAITYRHLTLGCLKAGIVKEALKTMDIA 419
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 123/269 (45%), Gaps = 13/269 (4%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+V+ ++++ YA A + E AE ++ + LV I YNS++ Y Q GN + +++L+ +
Sbjct: 88 AVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQ 147
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
MEE+G + ++ +L+ A D E ++A G+ Y + KAG
Sbjct: 148 MEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKA-CGLSPTAATYGCIVKLFTKAG 206
Query: 273 LSDKALAVLRKSEVLMMH-NKFSRAYDFVITQYAACGNKDDVLRVWKR-----YKQNLKV 326
KAL +L + + + NK Y ++ YA G+ +VW+ K ++ +
Sbjct: 207 NMAKALDILEEMDKHGVSPNKM--IYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVI 264
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
YN ++ + K M+ A + E E+ L I ++D Y + G + KA +
Sbjct: 265 YN----ILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVF 320
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+ + G P V ++ + +G + Q E
Sbjct: 321 DRIKTAGLRPGVVSYNSLLSGLAKARQME 349
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 130/305 (42%), Gaps = 38/305 (12%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
L+ A+++ E+ S+F+ + P+ Y ++ + A + KA I+++M G+
Sbjct: 164 LNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGV 223
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ Y +M+ Y + G++ + +M G+ D ++IL+ A A +
Sbjct: 224 SPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALG 283
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV--------LRKSEV--------- 286
++ +EA+R ++ Y + GYVK G KAL V LR V
Sbjct: 284 VLENIEANR-LLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGL 342
Query: 287 ----------LMMHNKFS-------RAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYN 328
LM++ + R+Y + YA G+ + +++R K +NL +
Sbjct: 343 AKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDI 402
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y ++ + K M+ A ++F++ L H+ ++D + R+G L KA L+
Sbjct: 403 VAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLND 462
Query: 389 AQLRG 393
Q G
Sbjct: 463 MQKHG 467
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
Query: 130 AKVQGIEQAASYFNCVP-EKLKLPSV-YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
A+ +E+A F + E L + V Y ALL A + + ++A + QQ+ D GL
Sbjct: 378 ARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNR 437
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
I Y +M++ + + G K L+++M++ G D ++ + AC + D E + + +A+
Sbjct: 438 ITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAV 497
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
M ++ + ++ Y T G++ A D+A++ +++
Sbjct: 498 MR-EKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAK 534
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 121/306 (39%), Gaps = 12/306 (3%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ YA A + MR + Y S+++ Y + + + + EM
Sbjct: 20 YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML 79
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+GI ++ F ++S A+A + E + +A+ +V VY + Y +AG
Sbjct: 80 SQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAEN-LVPGGIVYNSIVQAYCQAGNM 138
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYIC 333
+ A+L + E Y V+ +A +++ L + R K L Y C
Sbjct: 139 ETVEALLAQMEEEGFQGNLG-LYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGC 197
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
++ K M A I EE + + + I ++D Y R G A + G
Sbjct: 198 IVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG 257
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE--AGTRWKPSKECLAACLGYYKKE 451
+P++ + ++ + + + M KAL +LE R P+ E + L Y K
Sbjct: 258 LKPDIVIYNILVHAFCKAGR-------MDKALGVLENIEANRLLPTIETYTSILDGYVKG 310
Query: 452 RDIEGA 457
+I+ A
Sbjct: 311 GNIQKA 316
>gi|449438488|ref|XP_004137020.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 146
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 24/144 (16%)
Query: 41 TISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFS 100
T SL S+ L+R + GDP S+V +LDQWVEEGR + L+ +IK+ R + RF+
Sbjct: 26 TKSLPSPSTEDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVKQSDLQTLIKQLRKFGRFN 85
Query: 101 HALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLN 160
ALQ+ W+ + N L+ D+A+ +K P Y A+LN
Sbjct: 86 QALQLCEWVRNERNQCLSTGDIAV------------------------VKTPLSYNAMLN 121
Query: 161 AYACAKSAEKAEIIMQQMRDRGLV 184
YA EK ++++M + G V
Sbjct: 122 LYAHLGKHEKLAELLKEMEEMGTV 145
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
D +VK + YN+M+N+Y G ++KL L+ EMEE G
Sbjct: 106 DIAVVKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMG 143
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 122/280 (43%), Gaps = 16/280 (5%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
Y L+++ + A+ K E + +M+ +V Y +++N Y + GN ++ ++ E
Sbjct: 248 GTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDE 307
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
G++ ++ T+ +L++ E + ++A M+ +GV L+ ++ T GY + G
Sbjct: 308 CVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQG-QGVGLNQIIFNTMIDGYCRKG 366
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG----NKDDVLRVWKRYKQNLKVYN 328
+ D AL + E K D ACG N+ D + + V
Sbjct: 367 MVDDALKIKAAME------KMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVP 420
Query: 329 R--GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
Y +IS K M A ++F E + + N +ID Y ++G + +AE
Sbjct: 421 NYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFR 480
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSE---KGVEAMKK 423
+ + +G P+V T+ + G+ N + + K E MK+
Sbjct: 481 KEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQ 520
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 115/263 (43%), Gaps = 39/263 (14%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
+ A ++ M G+ + YNS+++ Y + + ++ ++ ME +GI+ T++IL
Sbjct: 194 DDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTIL 253
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM 288
+ + + A D ++ + M+A+ VV D +Y + Y +AG +A VL +
Sbjct: 254 VDSLSTARDISKVEALFNEMKANN-VVGDVYLYTAVINAYCRAGNMRRAAKVLDE----- 307
Query: 289 MHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAE 348
GN ++ R Y +I+ K ME+AE
Sbjct: 308 -----------------CVGN-------------GVEPNERTYGVLINGFCKIGQMEAAE 337
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+ + + + + + I N +ID YCR+G++ A + + G E ++ T+ +A G
Sbjct: 338 MLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGL 397
Query: 409 LQNNQSEKGVEAMKKALVLLEAG 431
+ N+ + EA +++E G
Sbjct: 398 CRVNRLD---EAKTLLHIMIEMG 417
>gi|302801862|ref|XP_002982687.1| hypothetical protein SELMODRAFT_422000 [Selaginella moellendorffii]
gi|300149786|gb|EFJ16440.1| hypothetical protein SELMODRAFT_422000 [Selaginella moellendorffii]
Length = 541
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 153/362 (42%), Gaps = 45/362 (12%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRL 126
+V L W EG + + + +I + + +++ W+ + F LT D +R+
Sbjct: 125 IVAALKDWQSEGNLVTRDVIYKLIIRLHARMFYFQGMKLMNWVIVEKPFQLTDFDHLVRM 184
Query: 127 DLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
D + +++ + FN + +K + + Y+ LL A+A A E+A +++QM++ L+
Sbjct: 185 DFHTRELKVDKVLTCFNRIQDKTE--TCYVLLLQAFATAHRKERALDVLKQMKELVLITN 242
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG-IDCDKYTFSILLSACAAASDGEGIDKIV 245
YN ++ +Y + G + + E+++K + D +T+ LL + D G+D +
Sbjct: 243 PYSYNLVIAMYLRMGLIDEAKEMFAELKDKSNVAPDAFTYLNLLK----SRDALGMDDLE 298
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF--VITQ 303
+E E + +K +++ +I
Sbjct: 299 DTIE-----------------------------------EFFLDVDKIPTGFEWRNLIRL 323
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDG-MESAEKIFEEWESRNLCHD 362
Y A G K DV R+W+ K+ + Y +G M+ E+I ++ E++N
Sbjct: 324 YGAMGKKKDVERLWREQKRVAEYMPESYFLAAIESFGMNGEMKQFEEICKQLEAQNQKLS 383
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
R ++ YC GL++ AE K + + + ++ + +GY+ +Q K E
Sbjct: 384 ERQCFTMLKVYCMNGLMNDAERTAKKMEELRYKLGFKGYHYLVSGYVNRHQFVKATEKFS 443
Query: 423 KA 424
+A
Sbjct: 444 EA 445
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 143/319 (44%), Gaps = 30/319 (9%)
Query: 98 RFSHALQISMWMTKKSNF--VLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPS-- 153
+ + AL+I M + F VLT V I +D + K Q +E+A S F + +K+ P+
Sbjct: 174 KLNAALEIRDDMERAGLFPNVLT---VNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAV 230
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+ +L++ + A + ++M D G V I Y S++ +++ G + + EM
Sbjct: 231 TFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEM 290
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
G D + + A + E + + A G + D Y+ G VKAGL
Sbjct: 291 VHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINA-HGFIPDARSYSILIHGLVKAGL 349
Query: 274 SDKAL----AVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK--QNLKVY 327
+++ A+ + VL H AY+ VI + G +V K Y+ + +KV
Sbjct: 350 ANETYELFYAMKEQGCVLDTH-----AYNAVIDGFCKSG------KVNKAYQLLEEMKVK 398
Query: 328 NRG-----YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
Y VI L K D ++ A +FEE +S + ++ + + LID + + G + +A
Sbjct: 399 GHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEA 458
Query: 383 ETLIYKAQLRGTEPNVRTW 401
++ + +G PNV TW
Sbjct: 459 YLIMEELMQKGLTPNVYTW 477
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 139/363 (38%), Gaps = 47/363 (12%)
Query: 86 LRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LDLIAKVQGIEQAASYFN 143
+ I+I + ++ A I M K V TP V +D + K ++ A S +
Sbjct: 197 VNIMIDRLCKAQKLEEACSIFEGMDDK---VCTPNAVTFSSLIDGLGKCGRVDDAYSLYE 253
Query: 144 CVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
+ + +P VY +L+ ++ E I ++M G N+ M+ ++ G
Sbjct: 254 KMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAG 313
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS-DGEGIDKIVAMMEADRGVVLDWTV 260
+K +L E+ G D ++SIL+ A E + AM E +G VLD
Sbjct: 314 ETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKE--QGCVLDTHA 371
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
Y G+ K+G +KA +L + +V H Y VI A D+ +++
Sbjct: 372 YNAVIDGFCKSGKVNKAYQLLEEMKV-KGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 430
Query: 321 KQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL-------------------- 359
K N +K+ Y +I K ++ A I EE + L
Sbjct: 431 KSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 490
Query: 360 -----CH----DIRIPNH------LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
C D++ P + LI+ CR +KA + Q G +PN T+ M
Sbjct: 491 NEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTM 550
Query: 405 ATG 407
+G
Sbjct: 551 ISG 553
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 114/292 (39%), Gaps = 41/292 (14%)
Query: 148 KLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
K +PSV Y +L + E+A I ++M+ R V YN ++++ + G
Sbjct: 119 KGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNA 177
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAA 265
+ +ME G+ + T +I++ A E I M+ D+ + +++
Sbjct: 178 ALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMD-DKVCTPNAVTFSSLI 236
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY----- 320
G K G D A ++ K + H + Y +I + CG K+D +++K
Sbjct: 237 DGLGKCGRVDDAYSLYEKM-LDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGC 295
Query: 321 KQNLKVYN-------------------------------RGYICVISSLLKFDGMESAEK 349
+L + N R Y +I L+K +
Sbjct: 296 SPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYE 355
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+F + + D N +ID +C+ G ++KA L+ + +++G P V T+
Sbjct: 356 LFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTY 407
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 108/239 (45%), Gaps = 15/239 (6%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y ++++ A ++A ++ ++ + G+ + Y+S+++ + + G + +
Sbjct: 402 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLI 461
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASG 267
M E+ +KG+ + YT++ LL A A E I++ + ++ D + Y+ +G
Sbjct: 462 MEELMQKGLTPNVYTWNCLLDALVKA---EEINEALICFQSMKDLKCPPNQITYSILING 518
Query: 268 YVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
+ +KA ++ + L + + Y +I+ A GN + ++ R+K N +
Sbjct: 519 LCRVRKFNKAFVFWQEMQKLGLKPN-TITYTTMISGLAKAGNILEASGLFSRFKANGGIP 577
Query: 328 NRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+ Y +I L + A +FEE + + L+DA LHKAE L
Sbjct: 578 DSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDA------LHKAECL 630
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 128/283 (45%), Gaps = 5/283 (1%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K Q +++A + + +P+ Y ++++ Y + ++A +++M G+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ YNS+M+ + G + + M ++G+ + T+ LL A + ++
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
+M G+ + V++ Y K G D+A+ V K + N + Y VI
Sbjct: 364 LM-VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL-NPDTVTYGTVIGILCK 421
Query: 307 CGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
G +D +R +++ + L N Y +I SL FD + A+++ E R +C D
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
N +ID++C+ G + ++E L G +P++ T+ + GY
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 524
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 150/354 (42%), Gaps = 20/354 (5%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV--AI 124
M LLD V G + I+I + + A+ + M ++ L P V
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG---LNPDTVTYGT 414
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+ ++ K +E A YF + ++ P VY +L+++ +KA+ ++ +M DRG
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI 241
+ TI +NS+++ + + G + + L M G+ D T+S L+ C A E
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVI 301
+ +M+ G+ D Y T +GY K + AL + R+ E + Y+ ++
Sbjct: 535 KLLASMVSV--GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII-TYNIIL 591
Query: 302 -----TQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWES 356
T+ A + V + L YN ++ L K + + A ++F+
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYN----IILHGLCKNNLTDEALRMFQNLCL 647
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+L + R N +I A + G +A+ L G P+VRT+ LMA ++
Sbjct: 648 TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIE 701
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/295 (18%), Positives = 121/295 (41%), Gaps = 17/295 (5%)
Query: 139 ASYFNCVPEKLKLPSVYIALLNAYACA--KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNV 196
A+ N + + ++ ++ L CA ++++ +I++++M G + YN ++
Sbjct: 112 AALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKG 171
Query: 197 YYQTGNYKKLDSLMHEMEEKGIDC--DKYTFSILLSACAAASDGEGIDKIVAMMEA--DR 252
++ L+ M + G DC D +++ +++ D +DK DR
Sbjct: 172 LCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD---LDKAYGTYHEMLDR 228
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGN 309
G++ + Y++ + KA DKA+ VL M+ N R Y+ ++ Y + G
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTS----MVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 310 KDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
+ + K+ + ++ Y ++ L K A K+F+ R L +I
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
L+ Y +G L + L+ G PN + ++ Y + + ++ + K
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 132/323 (40%), Gaps = 31/323 (9%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ L+ AYA ++A ++ +MR +GL T+ Y +++ + ++G + +M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Query: 214 EEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
++ + + S++ S C + + I+ M+ DRG+ LD + + + K G
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML--DRGICLDTIFFNSIIDSHCKEG 493
Query: 273 -------LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY----- 320
L D + + K +++ Y +I Y G D+ ++
Sbjct: 494 RVIESEKLFDLMVRIGVKPDII--------TYSTLIDGYCLAGKMDEATKLLASMVSVGM 545
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
K + YN +I+ K ME A +F E ES + DI N ++ +
Sbjct: 546 KPDCVTYNT----LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKEC 440
A+ L GT+ + T+ ++ G +NN +++ + M + L L + +
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR-MFQNLCLTDLQLETRTFNIM 660
Query: 441 LAACLGYYKKERDIEGADYFIKL 463
+ A L K R+ E D F L
Sbjct: 661 IGALL---KVGRNDEAKDLFAAL 680
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 126/306 (41%), Gaps = 16/306 (5%)
Query: 95 LYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI---------AKVQGIEQAASYFNCV 145
+Y H+L I K +L D I LD I K + ++ F+ +
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505
Query: 146 PEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
P + Y L++ Y A ++A ++ M G+ + YN+++N Y +
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI-VAMMEADRGVVLDWTVYA 262
+ L EME G+ D T++I+L ++ V + E+ G L+ + Y
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES--GTQLELSTYN 623
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ 322
G K L+D+AL + + + + + +R ++ +I G D+ ++
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLE-TRTFNIMIGALLKVGRNDEAKDLFAALSA 682
Query: 323 NLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
N V + R Y + +L++ +E + +F E + R+ N ++ +RG + +
Sbjct: 683 NGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITR 742
Query: 382 AETLIY 387
A T ++
Sbjct: 743 AGTYLF 748
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 139/288 (48%), Gaps = 26/288 (9%)
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+++V + G + LM+EM +G+ +T++ LL+AC D EG+D+I+ +ME +
Sbjct: 188 VVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLMERE- 246
Query: 253 GVVLDWTVYATAASGYV---KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN 309
GVV Y Y + G ++K + + V M Y +I+ GN
Sbjct: 247 GVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMD----VYVYTSMISWNCRAGN 302
Query: 310 KDDVLRVWKRYKQNLKVYNRGYI-------CVISSLLKFDGMESAEKIFEEWESRNLCHD 362
V R + + + RG + +IS + K ME+AE + EE + + + +
Sbjct: 303 ---VRRASALFDEMI---CRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLN 356
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ I N ++D YC+RG++ +A L + +G E +V T+ ++A+G + ++ E EA +
Sbjct: 357 VVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYE---EAKR 413
Query: 423 KALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEII 470
V++E G P+ A + Y +E ++ + F++ + + ++
Sbjct: 414 VLNVMVEKGV--APNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVV 459
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 133/307 (43%), Gaps = 21/307 (6%)
Query: 122 VAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMR 179
+ I +D++ + + +A N + + +P+V Y LLNA K E + I+ M
Sbjct: 185 LTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLME 244
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS-ACAAASDG 238
G+V + Y ++ Y + + + + EM E+ ++ D Y ++ ++S C A +
Sbjct: 245 REGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVR 304
Query: 239 EG---IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR 295
D+++ RG+V + + SG KAG + A +L + + +
Sbjct: 305 RASALFDEMIC-----RGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVV- 358
Query: 296 AYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVYNRGYICVISSLLKFDGMESAEKI 350
++ ++ Y G D+ R+ K ++ ++ YN + S L K E A+++
Sbjct: 359 IFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYN----ILASGLCKLHRYEEAKRV 414
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+ + ++ I+ YC+ G L + E + + RG PN+ T+ + Y +
Sbjct: 415 LNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSK 474
Query: 411 NNQSEKG 417
N + ++
Sbjct: 475 NEKVKQA 481
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 122/283 (43%), Gaps = 23/283 (8%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+ YA ++ +AE + ++M +R + Y SM++ + GN ++ +L EM
Sbjct: 255 YTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMI 314
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+GI + TF L+S A E + ++ M+ +GV L+ ++ T GY K G+
Sbjct: 315 CRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQC-KGVDLNVVIFNTMMDGYCKRGMM 373
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN----RG 330
D+A R +++ + + + I C RY++ +V N +G
Sbjct: 374 DEAF---RLQDIMERKGFEADVFTYNILASGLCK--------LHRYEEAKRVLNVMVEKG 422
Query: 331 YICVISSLLKF-------DGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
+ + F + E+ E R + +I N LIDAY + + +A
Sbjct: 423 VAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAH 482
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
L + +G P+V T+ + G ++ ++ ++ + LV
Sbjct: 483 XLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLV 525
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 122/291 (41%), Gaps = 46/291 (15%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
AL++ A E AEI++++M+ +G+ + +N+MM+ Y + G + L ME K
Sbjct: 327 ALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERK 386
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
G + D +T++IL S E +++ +M ++GV + AT Y + G +
Sbjct: 387 GFEADVFTYNILASGLCKLHRYEEAKRVLNVM-VEKGVAPNVVTCATFIEIYCQEGNLAE 445
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVIS 336
LR E K V+ N+ YN +I
Sbjct: 446 PERFLRNIE------------------------KRGVV-------PNIVTYNT----LID 470
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
+ K + ++ A + E + L D+ LI C + +A L + ++G
Sbjct: 471 AYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRG 530
Query: 397 NVRTWYLMATGYLQNNQSEKGV----EAMKKALV----LLEA--GTRWKPS 437
NV+T+ + +G + ++++ + E M+ L+ + EA G+ KPS
Sbjct: 531 NVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALVGSLHKPS 581
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 128/291 (43%), Gaps = 18/291 (6%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ + E+A ++ +M + GL + Y +++ G+ + L+H ME
Sbjct: 250 YTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
G+ + +TFS+L+ A E + + +GV ++ VY + G K G
Sbjct: 310 TNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSL-VKKGVKVNEVVYTSLIDGLCKTGKI 368
Query: 275 DKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNK---DDVLRVWKRYKQNLKVYN 328
D A +++K M+ F + +Y +I C K L + ++ ++
Sbjct: 369 DAADELMQK----MISEGFVPDAHSYSSLID--GLCRQKKLSQATLMLEDMMEKGIQASP 422
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y +I L++ G E +KIF++ + + DI + +YC G + AE++I +
Sbjct: 423 VTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQ 482
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKE 439
RG PN+ T+ + GY + G+ + + + G WKP+++
Sbjct: 483 MVDRGVFPNLVTYNTLIRGY-----ANLGLVSQAFSTFEVMVGKGWKPNED 528
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 121/329 (36%), Gaps = 46/329 (13%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+NAY A A+ + + GL + Y S + Y + G + M
Sbjct: 75 YTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP 134
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+G +T++ LL A + M AD D VYAT G +AG +
Sbjct: 135 LRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRAD-SCAPDTHVYATMVHGLCEAGRT 193
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
++A +L ++ M N F + N+ VYN +
Sbjct: 194 EEAEVLLEEA----MSNGF---------------------------EPNIVVYN----AL 218
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I ME A K+FE + ++R LI C+ G + +A L + G
Sbjct: 219 IDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGL 278
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDI 454
EPNV T+ T +Q +E ++ + L L+E P+ + + K +
Sbjct: 279 EPNVVTY----TALIQGQCNEGHLQCAFRLLHLMETNG-LVPNDWTFSVLIDALCKREKV 333
Query: 455 EGADYFIKLLTGK-----EIISADLQDRL 478
E A F+ L K E++ L D L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGL 362
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 128/283 (45%), Gaps = 5/283 (1%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K Q +++A + + +P+ Y ++++ Y + ++A +++M G+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ YNS+M+ + G + + M ++G+ + T+ LL A + ++
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
+M G+ + V++ Y K G D+A+ V K + N + Y VI
Sbjct: 364 LM-VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL-NPDTVTYGTVIGILCK 421
Query: 307 CGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
G +D +R +++ + L N Y +I SL FD + A+++ E R +C D
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
N +ID++C+ G + ++E L G +P++ T+ + GY
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 524
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 150/354 (42%), Gaps = 20/354 (5%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV--AI 124
M LLD V G + I+I + + A+ + M ++ L P V
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG---LNPDTVTYGT 414
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+ ++ K +E A YF + ++ P VY +L+++ +KA+ ++ +M DRG
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI 241
+ TI +NS+++ + + G + + L M G+ D T+S L+ C A E
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVI 301
+ +M+ G+ D Y T +GY K + AL + R+ E + Y+ ++
Sbjct: 535 KLLASMVSV--GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII-TYNIIL 591
Query: 302 -----TQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWES 356
T+ A + V + L YN ++ L K + + A ++F+
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYN----IILHGLCKNNLTDEALRMFQNLCL 647
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+L + R N +I A + G +A+ L G P+VRT+ LMA ++
Sbjct: 648 TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIE 701
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/295 (18%), Positives = 121/295 (41%), Gaps = 17/295 (5%)
Query: 139 ASYFNCVPEKLKLPSVYIALLNAYACA--KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNV 196
A+ N + + ++ ++ L CA ++++ +I++++M G + YN ++
Sbjct: 112 AALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKG 171
Query: 197 YYQTGNYKKLDSLMHEMEEKGIDC--DKYTFSILLSACAAASDGEGIDKIVAMMEA--DR 252
++ L+ M + G DC D +++ +++ D +DK DR
Sbjct: 172 LCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD---LDKAYGTYHEMLDR 228
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGN 309
G++ + Y++ + KA DKA+ VL M+ N R Y+ ++ Y + G
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTS----MVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 310 KDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
+ + K+ + ++ Y ++ L K A K+F+ R L +I
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
L+ Y +G L + L+ G PN + ++ Y + + ++ + K
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 132/323 (40%), Gaps = 31/323 (9%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ L+ AYA ++A ++ +MR +GL T+ Y +++ + ++G + +M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Query: 214 EEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
++ + + S++ S C + + I+ M+ DRG+ LD + + + K G
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML--DRGICLDTIFFNSIIDSHCKEG 493
Query: 273 -------LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY----- 320
L D + + K +++ Y +I Y G D+ ++
Sbjct: 494 RVIESEKLFDLMVRIGVKPDII--------TYSTLIDGYCLAGKMDEATKLLASMVSVGM 545
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
K + YN +I+ K ME A +F E ES + DI N ++ +
Sbjct: 546 KPDCVTYNT----LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKEC 440
A+ L GT+ + T+ ++ G +NN +++ + M + L L + +
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR-MFQNLCLTDLQLETRTFNIM 660
Query: 441 LAACLGYYKKERDIEGADYFIKL 463
+ A L K R+ E D F L
Sbjct: 661 IGALL---KVGRNDEAKDLFAAL 680
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 126/306 (41%), Gaps = 16/306 (5%)
Query: 95 LYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI---------AKVQGIEQAASYFNCV 145
+Y H+L I K +L D I LD I K + ++ F+ +
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505
Query: 146 PEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
P + Y L++ Y A ++A ++ M G+ + YN+++N Y +
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI-VAMMEADRGVVLDWTVYA 262
+ L EME G+ D T++I+L ++ V + E+ G L+ + Y
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES--GTQLELSTYN 623
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ 322
G K L+D+AL + + + + + +R ++ +I G D+ ++
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLE-TRTFNIMIGALLKVGRNDEAKDLFAALSA 682
Query: 323 NLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
N V + R Y + +L++ +E + +F E + R+ N ++ +RG + +
Sbjct: 683 NGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITR 742
Query: 382 AETLIY 387
A T ++
Sbjct: 743 AGTYLF 748
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 126/282 (44%), Gaps = 13/282 (4%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
+AK + + + + VP + +Y L+N Y + A I +QM+ R + I
Sbjct: 172 VAKAEQVLEMLVHTGLVPTTV----IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHI 227
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMM 248
YN+++N + K + L+ EME+ G+D TF+ L+ A A E +++ M
Sbjct: 228 TYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM 287
Query: 249 EADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYA 305
+ +G+ D + + + K G +A+A+L M++ ++ Y+ +I Y
Sbjct: 288 Q-QKGIKSDVISFGSVVKAFCKNGKIPEAVAILDD----MIYKDVAPNAQVYNSIIDAYI 342
Query: 306 ACGNKDDV-LRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
G+ + L V K + Y ++ L + ++ AE++ ++ L D+
Sbjct: 343 ESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 402
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
N +I A C +G KA L+ + G P +RT++ + +
Sbjct: 403 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVS 444
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 25/278 (8%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
LLN KAE +++ + GLV T+ YN+++N Y Q + + + +M+ +
Sbjct: 162 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 221
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
I D T++ L++ + +V ME GV + T Y AG +K
Sbjct: 222 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEK-SGVDPSVETFNTLIDAYGTAGQLEKC 280
Query: 278 LAVLR-------KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLR-----VWKRYKQNLK 325
VL KS+V+ ++ V+ + G + + ++K N +
Sbjct: 281 FTVLSDMQQKGIKSDVI--------SFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 332
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
VYN +I + ++ E A + E+ ++ + I N L+ CR + +AE L
Sbjct: 333 VYNS----IIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 388
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
IY + +G P+V ++ + + ++K +E +++
Sbjct: 389 IYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 426
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 21/253 (8%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-C 232
+ +M D G+V I YN+M++ + + G+ + L +M G + T+++LLS C
Sbjct: 38 VFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLC 97
Query: 233 AAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH 290
A +D+ +M+ A + D Y+ G + G S L++ +S +
Sbjct: 98 RAGR----MDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAES---LKK 150
Query: 291 NKFSRAYDFVITQYAAC-----GNKDDVLR--VWKRYKQNLKVYNRGYICVISSLLKFDG 343
AY I C + VL V +YN +I+ +
Sbjct: 151 GVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNT----LINGYCQVRD 206
Query: 344 MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYL 403
+ A IFE+ +SR++ D N LI+ C+ ++ KAE L+ + + G +P+V T+
Sbjct: 207 LRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNT 266
Query: 404 MATGYLQNNQSEK 416
+ Y Q EK
Sbjct: 267 LIDAYGTAGQLEK 279
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 9/268 (3%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +++ + E + QM G + YN +++ + G + LM EM
Sbjct: 54 YNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMA 113
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ D +T+SIL + + + A +GV+L + +G K G
Sbjct: 114 SHSMFPDGFTYSILFDGLTRTGESRTMLSLFA-ESLKKGVMLGAYTCSILLNGLCKDGKV 172
Query: 275 DKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRG 330
KA VL +++H + Y+ +I Y + ++++ K ++++ +
Sbjct: 173 AKAEQVLE----MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHIT 228
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I+ L K + + AE + E E + + N LIDAY G L K T++ Q
Sbjct: 229 YNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQ 288
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGV 418
+G + +V ++ + + +N + + V
Sbjct: 289 QKGIKSDVISFGSVVKAFCKNGKIPEAV 316
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 117/274 (42%), Gaps = 44/274 (16%)
Query: 144 CVPEKLKLPSV------YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVY 197
C+ E++K + Y AL+N + KAE ++ +M G+ +N++++ Y
Sbjct: 212 CIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAY 271
Query: 198 YQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVL 256
G +K +++ +M++KGI D +F S++ + C E + + M+ D V
Sbjct: 272 GTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKD--VAP 329
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSE------------------------------V 286
+ VY + Y+++G +++A ++ K + +
Sbjct: 330 NAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI 389
Query: 287 LMMHNKFSR----AYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKF 341
+ N+ R +Y+ +I+ G+ D L + + K ++ R Y ++S+L
Sbjct: 390 YTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASA 449
Query: 342 DGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
+ E ++++ +N+ I ++DAY R
Sbjct: 450 GRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 483
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 2/129 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y LL + ++AE ++ +R++GL + YN++++ G+ K L+ EM
Sbjct: 369 YNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMN 428
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ GI T+ L+SA A+A ++ + M + V ++Y YV+ +
Sbjct: 429 KYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM-LHKNVEPSSSIYGIMVDAYVRCE-N 486
Query: 275 DKALAVLRK 283
D +A L+K
Sbjct: 487 DSKVASLKK 495
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 131/296 (44%), Gaps = 20/296 (6%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y L++ + E+A ++ +M + GL + Y +++ G+ + L
Sbjct: 245 PNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRL 304
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+H ME G+ + +TFS+L+ A E + + +GV ++ VY + G
Sbjct: 305 LHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSL-VKKGVKVNEVVYTSLIDGLC 363
Query: 270 KAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNK---DDVLRVWKRYKQN 323
K G D A +++K M+ F + +Y +I C K L + ++
Sbjct: 364 KTGKIDAADELMQK----MISEGFVPDAHSYSSLID--GLCRQKKLSQATLMLEDMMEKG 417
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
++ Y +I L++ G E +KIF++ + + DI + +YC G + AE
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKE 439
++I + RG PN+ T+ + GY + G+ + + + G WKP+++
Sbjct: 478 SMIVQMVDRGVFPNLVTYNTLIRGY-----ANLGLVSQAFSTFEVMVGKGWKPNED 528
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 138/363 (38%), Gaps = 56/363 (15%)
Query: 117 LTPAD--VAIRLDLIAKVQGIEQAASYFNCVPEK-LKLPSV-YIALLNAYACAKSAEKAE 172
L P D ++ +D + K + +E+A + + +K +K+ V Y +L++ + A+
Sbjct: 313 LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAAD 372
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+MQ+M G V Y+S+++ + + ++ +M EKGI T++I++
Sbjct: 373 ELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDEL 432
Query: 233 AAASDGEGIDKIVAMMEA----------------------------------DRGVVLDW 258
EG KI M A DRGV +
Sbjct: 433 VREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNL 492
Query: 259 TVYATAASGYVKAGLSDKALAVLRKSEVLMMHN--KFSRAYDFVITQYAACGNKDDVLRV 316
Y T GY GL +A + EV++ +Y ++ + D+ + +
Sbjct: 493 VTYNTLIRGYANLGLVSQAFSTF---EVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI 549
Query: 317 WKR-------------YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
WK ++ L + Y C I L + D +E A+ F ++ NL
Sbjct: 550 WKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSE 609
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ +ID CR +L A TL+ G P++ ++ ++ + + E
Sbjct: 610 DVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGD 669
Query: 424 ALV 426
L+
Sbjct: 670 LLL 672
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 121/329 (36%), Gaps = 46/329 (13%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+NAY A A+ + + GL + Y S + Y + G + M
Sbjct: 75 YTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP 134
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+G +T++ LL A + M AD D VYAT G +AG +
Sbjct: 135 LRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRAD-SCAPDTHVYATMVHGLCEAGRT 193
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
++A +L ++ M N F + N+ VYN +
Sbjct: 194 EEAEVLLEEA----MSNGF---------------------------EPNIVVYN----AL 218
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I ME A K+FE + ++R LI C+ G + +A L + G
Sbjct: 219 IDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGL 278
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDI 454
EPNV T+ T +Q +E ++ + L L+E P+ + + K +
Sbjct: 279 EPNVVTY----TALIQGQCNEGHLQCAFRLLHLMETNG-LVPNDWTFSVLIDALCKREKV 333
Query: 455 EGADYFIKLLTGK-----EIISADLQDRL 478
E A F+ L K E++ L D L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGL 362
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 10/280 (3%)
Query: 152 PSVYI-ALLNAYACAKSA--EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
P+VY +L CA+ E ++ MR G + YN+++ + + G +
Sbjct: 152 PNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAER 211
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
L+ M E G+ TF+ +++ A E K+ M A G+ D Y T SGY
Sbjct: 212 LVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEM-AREGLTPDGVSYNTLVSGY 270
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC--GNKD-DVLRVWKRYKQNLK 325
KAG +ALAV + + F +A C GN + V V + ++ L+
Sbjct: 271 CKAGCLHEALAVFAE---MAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLR 327
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+ + +I + ++ A +E + + N LI+ YC+ G + +A L
Sbjct: 328 MNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEAREL 387
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
I++ + +G +P+V T+ + +GY + ++ E +K L
Sbjct: 388 IHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKML 427
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 125/270 (46%), Gaps = 17/270 (6%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ Y A +A + +M +G+V + + S+++ + GN ++ +L+ +M
Sbjct: 263 YNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMR 322
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTV-YATAASGYVKAGL 273
E+G+ +++TF+ L+ +G D ++AM E + V Y +GY K G
Sbjct: 323 ERGLRMNEFTFTALID--GFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGR 380
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG--- 330
D+A ++ + E M Y +++ Y G+ D ++ N K+ +G
Sbjct: 381 MDEARELIHEMEAKGMKPDVV-TYSTILSGYCKIGDTDSA------FELNRKMLKKGVVP 433
Query: 331 ----YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
Y +I L + + A ++FE+ L D LID +C+ G + KA +L
Sbjct: 434 DAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLH 493
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ +G P+V T+ ++ G ++ ++++
Sbjct: 494 DEMIKKGVLPDVVTYSVLIDGLSKSARTKE 523
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 114/266 (42%), Gaps = 9/266 (3%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
CVP+ Y L++ A +A + +MR+RG V T YNS++ + G
Sbjct: 109 GCVPDV----RTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGR 164
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD-RGVVLDWTVY 261
+K L+ EME G D T+S L++ DGE + E RG D +
Sbjct: 165 SQKAMELLEEMERHGCPPDVMTYSSLIT--GLGKDGETVKAFKLFQEMKRRGRKPDSITF 222
Query: 262 ATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK 321
KAG D AL +L + + + Y+ +I + G+ + + K
Sbjct: 223 TALMDALGKAGRVDDALELLDEMKERGVKPGVV-TYNALIAGFGKVGDLVEAYNLLDEMK 281
Query: 322 QN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
+N K Y C+I+ L+K ++ A ++ ++ E D N LI+ + GLL+
Sbjct: 282 RNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLN 341
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMAT 406
A L + + +G P+V T+ + T
Sbjct: 342 DAGRLFDRMKSKGCNPDVVTYSTLIT 367
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 135/301 (44%), Gaps = 5/301 (1%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
L+ +AK E+A F + P V Y L+N+ A E A ++ +M+ +G
Sbjct: 16 LNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGC 75
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
YN++++ + G + + L+ EM + G D T++ L+S A
Sbjct: 76 KPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFT 135
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ 303
+ A M +RG V D Y + G K G S KA+ +L + E Y +IT
Sbjct: 136 LFAEMR-ERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDV-MTYSSLITG 193
Query: 304 YAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
G ++++ K + K + + ++ +L K ++ A ++ +E + R +
Sbjct: 194 LGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPG 253
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ N LI + + G L +A L+ + + G +P+V T+ + TG ++ +Q ++ + +K
Sbjct: 254 VVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLK 313
Query: 423 K 423
K
Sbjct: 314 K 314
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 130/291 (44%), Gaps = 8/291 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+ AL++A A + A ++ +M++RG+ + YN+++ + + G+ + +L+ EM
Sbjct: 221 TFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEM 280
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ G D T+S L++ AS + +++ ME + G D Y T +G KAGL
Sbjct: 281 KRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKE-GCPPDTITYNTLINGLGKAGL 339
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYI 332
+ A + + + N Y +IT + +++ + ++ Y
Sbjct: 340 LNDAGRLFDRMKS-KGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYC 398
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I+ L K ++ A+++F E + L D+ N +++ R G +A + +
Sbjct: 399 SIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKES 458
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSK--ECL 441
G P+V T+ + G + + + +K+ L+E G + K ECL
Sbjct: 459 GLLPDVATYDALLLGLSKTKEVDDACGLLKE---LIEQGCAFDSLKFDECL 506
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 93/229 (40%), Gaps = 36/229 (15%)
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
+ YNS++N + G ++ L E++ D ++S L+++ A E ++VA
Sbjct: 10 VTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAE 69
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC 307
M+A +G + Y T KAG D+AL +L + M N
Sbjct: 70 MQA-KGCKPNLWTYNTLVDCLGKAGQFDEALRLLAE----MRDN---------------- 108
Query: 308 GNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
G DV R Y C+IS+L K + A +F E R D N
Sbjct: 109 GCVPDV---------------RTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYN 153
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
LI + G KA L+ + + G P+V T+ + TG ++ ++ K
Sbjct: 154 SLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVK 202
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 131/360 (36%), Gaps = 47/360 (13%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
LLD+ G D+ +I + A Q+ M K+ P D LI
Sbjct: 276 LLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG----CPPDTITYNTLI 331
Query: 130 ---AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
K + A F+ + K P V Y L+ A A E A ++ ++M G+
Sbjct: 332 NGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQ 391
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI 244
Y S++ V + G D L EM KG+ D T++ L++ + KI
Sbjct: 392 PDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKI 451
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF-SRAYDFVITQ 303
M+ + G++ D Y G K D A +L+ E++ F S +D +
Sbjct: 452 FEDMK-ESGLLPDVATYDALLLGLSKTKEVDDACGLLK--ELIEQGCAFDSLKFDECLEI 508
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
+ GN D+ A ++ + S+ L
Sbjct: 509 LTSWGNVDE----------------------------------AHELLQFANSKGLWPGA 534
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
N LIDA + G + +A + + +G +P++ ++ + + Q Q + E +++
Sbjct: 535 SSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEE 594
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 182/443 (41%), Gaps = 55/443 (12%)
Query: 64 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA 123
+D+M +L + E G ++ I++K R AL++ + M +P DV
Sbjct: 139 SDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALEL-LHMMADDRGGGSPPDVV 197
Query: 124 IRLDLIA---KVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQM 178
+I K ++A S ++ + ++ LP V Y +++ A A++ +KA ++ M
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTM 257
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG 238
G++ + YNS+++ Y +G K+ + +M G++ D T+S+L+
Sbjct: 258 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC 317
Query: 239 EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR--- 295
KI M RG+ + T Y T GY G AL + LM+ N
Sbjct: 318 MEARKIFDSM-TKRGLKPEITTYGTLLQGYATKG----ALVEMHGLLDLMVRNGIHPDHY 372
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNR--GYIC----VISSLLKFDGM 344
+ +I YA G D + V+ + +Q N Y G +C V ++L F+ M
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 345 -------------------------ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
E AE++ E R +C + N +ID++C+ G +
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Query: 380 HKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKE 439
++E L G +PNV T+ + GY + + EAMK ++ G KP+
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD---EAMKLLSGMVSVG--LKPNTV 547
Query: 440 CLAACLGYYKKERDIEGADYFIK 462
+ + Y K +E A K
Sbjct: 548 TYSTLINGYCKISRMEDALVLFK 570
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 152/351 (43%), Gaps = 24/351 (6%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV--AI 124
M LLD V G D I+I + + A+ + M ++ L P V
Sbjct: 355 MHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG---LNPNAVTYGA 411
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+ ++ K +E A YF + ++ P VY +L++ E+AE ++ +M DRG
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI 241
+ TI +NS+++ + + G + + L M G+ + T++ L++ C A E +
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV------LMMHNKFSR 295
+ M+ G+ + Y+T +GY K + AL + ++ E ++ +N +
Sbjct: 532 KLLSGMVSV--GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
F + AA K+ +R+ + Q L YN ++ L K + A ++F+
Sbjct: 590 GL-FQTRRTAAA--KELYVRITESGTQIELSTYN----IILHGLCKNKLTDDALQMFQNL 642
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
+L + R N +IDA + G +A+ L G PN T+ LMA
Sbjct: 643 CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMA 693
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 126/282 (44%), Gaps = 13/282 (4%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
+AK + + + + VP + +Y L+N Y + A I +QM+ R + I
Sbjct: 350 VAKAEQVLEMLVHTGLVPTTV----IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHI 405
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMM 248
YN+++N + K + L+ EME+ G+D TF+ L+ A A E +++ M
Sbjct: 406 TYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM 465
Query: 249 EADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYA 305
+ +G+ D + + + K G +A+A+L M++ ++ Y+ +I Y
Sbjct: 466 Q-QKGIKSDVISFGSVVKAFCKNGKIPEAVAILDD----MIYKDVAPNAQVYNSIIDAYI 520
Query: 306 ACGNKDDV-LRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
G+ + L V K + Y ++ L + ++ AE++ ++ L D+
Sbjct: 521 ESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 580
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
N +I A C +G KA L+ + G P +RT++ + +
Sbjct: 581 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVS 622
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 25/278 (8%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
LLN KAE +++ + GLV T+ YN+++N Y Q + + + +M+ +
Sbjct: 340 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 399
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
I D T++ L++ + +V ME GV + T Y AG +K
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKS-GVDPSVETFNTLIDAYGTAGQLEKC 458
Query: 278 LAVLR-------KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLR-----VWKRYKQNLK 325
VL KS+V+ ++ V+ + G + + ++K N +
Sbjct: 459 FTVLSDMQQKGIKSDVI--------SFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 510
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
VYN +I + ++ E A + E+ ++ + I N L+ CR + +AE L
Sbjct: 511 VYNS----IIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 566
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
IY + +G P+V ++ + + ++K +E +++
Sbjct: 567 IYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 604
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 21/253 (8%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-C 232
+ +M D G+V I YN+M++ + + G+ + L +M G + T+++LLS C
Sbjct: 216 VFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLC 275
Query: 233 AAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH 290
A +D+ +M+ A + D Y+ G + G S L++ +S +
Sbjct: 276 RAGR----MDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAES---LKK 328
Query: 291 NKFSRAYDFVITQYAAC-----GNKDDVLR--VWKRYKQNLKVYNRGYICVISSLLKFDG 343
AY I C + VL V +YN +I+ +
Sbjct: 329 GVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNT----LINGYCQVRD 384
Query: 344 MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYL 403
+ A IFE+ +SR++ D N LI+ C+ ++ KAE L+ + + G +P+V T+
Sbjct: 385 LRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNT 444
Query: 404 MATGYLQNNQSEK 416
+ Y Q EK
Sbjct: 445 LIDAYGTAGQLEK 457
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 112/269 (41%), Gaps = 9/269 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y +++ + E + QM G + YN +++ + G + LM EM
Sbjct: 231 TYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEM 290
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ D +T+SIL + + + A +GV+L + +G K G
Sbjct: 291 ASHSMFPDGFTYSILFDGLTRTGESRTMLSLFA-ESLKKGVMLGAYTCSILLNGLCKDGK 349
Query: 274 SDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNR 329
KA VL +++H + Y+ +I Y + ++++ K ++++ +
Sbjct: 350 VAKAEQVLE----MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHI 405
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +I+ L K + + AE + E E + + N LIDAY G L K T++
Sbjct: 406 TYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM 465
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
Q +G + +V ++ + + +N + + V
Sbjct: 466 QQKGIKSDVISFGSVVKAFCKNGKIPEAV 494
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 117/274 (42%), Gaps = 44/274 (16%)
Query: 144 CVPEKLKLPSV------YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVY 197
C+ E++K + Y AL+N + KAE ++ +M G+ +N++++ Y
Sbjct: 390 CIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAY 449
Query: 198 YQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVL 256
G +K +++ +M++KGI D +F S++ + C E + + M+ D V
Sbjct: 450 GTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKD--VAP 507
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSE------------------------------V 286
+ VY + Y+++G +++A ++ K + +
Sbjct: 508 NAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI 567
Query: 287 LMMHNKFSR----AYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKF 341
+ N+ R +Y+ +I+ G+ D L + + K ++ R Y ++S+L
Sbjct: 568 YTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASA 627
Query: 342 DGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
+ E ++++ +N+ I ++DAY R
Sbjct: 628 GRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 661
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y LL + ++AE ++ +R++GL + YN++++ G+ K L+ EM
Sbjct: 546 TYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM 605
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ GI T+ L+SA A+A ++ + M + V ++Y YV+
Sbjct: 606 NKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM-LHKNVEPSSSIYGIMVDAYVRCE- 663
Query: 274 SDKALAVLRK 283
+D +A L+K
Sbjct: 664 NDSKVASLKK 673
>gi|297849054|ref|XP_002892408.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338250|gb|EFH68667.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 154/367 (41%), Gaps = 9/367 (2%)
Query: 71 LDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIA 130
L W+ +G P+ + I + R R AL++ W+ ++ + + + L+
Sbjct: 87 LQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRPGELEYSYLLEFTV 146
Query: 131 KVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
K+ G+ Q F VP++ + +Y L+ A A M++MR+ G + Y
Sbjct: 147 KLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYRTSHLVY 206
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA 250
N ++ G K + + M+ T+ IL+ A + +G+ K M+
Sbjct: 207 NRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAFDGMK- 265
Query: 251 DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK 310
GV + Y A + A L A A + E + N +S D ++ Y G +
Sbjct: 266 KAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSVTGNNWS-TLDILMILYGRLGKE 324
Query: 311 DDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+++R W + V ++ Y+ + + ++ AE+++ E ++ + N L+
Sbjct: 325 KELVRTWNVIRGFHHVRSKSYLLATEAFAQVGNLDRAEELWLEMKNVRGLKETEQFNSLL 384
Query: 371 DAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA 430
YC+ GL+ KA + + G +PN T+ +A G + + MK+AL +E
Sbjct: 385 SVYCKDGLIEKAIGVFREMMGDGFKPNSITYRHLALGCAK-------AKLMKEALKNIEM 437
Query: 431 GTRWKPS 437
G+ K S
Sbjct: 438 GSNLKTS 444
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 122/268 (45%), Gaps = 5/268 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY +L++AYA + E+A +++M++ G+ + Y+ ++ + + GN D E
Sbjct: 321 VYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEA 380
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+EK + + ++ A + + + +V ME ++G+ +Y T GY G
Sbjct: 381 KEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREME-EQGIDAPIDIYHTMMDGYTMIGN 439
Query: 274 SDKALAVL-RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGY 331
+K L V R E + S Y +I Y G L + K K + +N + Y
Sbjct: 440 EEKCLIVFDRLKECGFFPSVIS--YGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTY 497
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I+ LK +A +FE++ L D+ + N++I A+C G + +A ++ + Q
Sbjct: 498 SMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQK 557
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVE 419
P RT+ + G+ + + + +E
Sbjct: 558 ERHRPTTRTFLPIIHGFARAGEMRRALE 585
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 155/373 (41%), Gaps = 55/373 (14%)
Query: 82 DMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGI---EQA 138
+M+ ++I F K +++A + TK L P DV + ++I G+ ++A
Sbjct: 493 NMKTYSMLINGFLKLKDWANAFSVFEDFTKDG---LKP-DVVLYNNIITAFCGMGNMDRA 548
Query: 139 ASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNV 196
+ ++ P+ ++ +++ +A A +A I MR G + YN+++
Sbjct: 549 ICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILG 608
Query: 197 YYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL 256
+ K +++ EM G+ +++T++ L+ A+ D E + ++ + G+ +
Sbjct: 609 LVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLR-NEGLEI 667
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLR 315
D Y K+G ALAV ++ S + N F Y+ +I +A G+
Sbjct: 668 DVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTF--VYNILIDGWARRGD------ 719
Query: 316 VWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
VW+ A + ++ L DI I+A C+
Sbjct: 720 VWE----------------------------AADLMQQMRKEGLLPDIHTYTSFINACCK 751
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWK 435
G + KA +I + + G +PN++T+ + G+ + + EK + ++ + AG +K
Sbjct: 752 AGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKL---AG--FK 806
Query: 436 PSK---ECLAACL 445
P K CL L
Sbjct: 807 PDKAVYHCLVTSL 819
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY L++ +A +A +MQQMR GL+ Y S +N + G+ +K ++ EM
Sbjct: 706 VYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEM 765
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGI-----DKIVAMMEADRGV----VLDWTVYATA 264
E GI + T++ L++ A AS E + +A + D+ V V AT
Sbjct: 766 EASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSLLSRATF 825
Query: 265 ASGYVKAGLSDKALAVLRK 283
A YV +GL L+V R+
Sbjct: 826 AQSYVYSGL----LSVCRE 840
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 11/253 (4%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
++++ ++ +KAE ++QQM D ++ YNS+++ Y +G + + ++ EM
Sbjct: 292 SVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRD 351
Query: 217 GIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
G + T+S+L+ C + E + +M+++ G + + Y + GY G
Sbjct: 352 GQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQS--GQKPNASTYGSLLHGYATEG--- 406
Query: 276 KALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDV-LRVWKRYKQNLKVYNRGY 331
L + + LM+ N ++ I Y CG D+ L K +Q Y
Sbjct: 407 -NLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAY 465
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
VI L K ++ A F + L DI N LI + G KAE L Y+
Sbjct: 466 TTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMD 525
Query: 392 RGTEPNVRTWYLM 404
RG PNV T+ M
Sbjct: 526 RGIPPNVNTFNSM 538
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 128/283 (45%), Gaps = 5/283 (1%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K Q +++A + + +P+ Y ++++ Y + ++A +++M G+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ YNS+M+ + G + + M ++G+ + T+ LL A + ++
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
+M G+ + V++ Y K G D+A+ V K + N + Y VI
Sbjct: 364 LM-VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL-NPDTVTYGTVIGILCK 421
Query: 307 CGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
G +D +R +++ + L N Y +I SL FD + A+++ E R +C D
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
N +ID++C+ G + ++E L G +P++ T+ + GY
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 524
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 150/353 (42%), Gaps = 18/353 (5%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV--AI 124
M LLD V G + I+I + + A+ + M ++ L P V
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG---LNPDTVTYGT 414
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+ ++ K +E A YF + ++ P VY +L+++ +KA+ ++ +M DRG
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ TI +NS+++ + + G + + L M G+ D T+S L+ A +
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVI- 301
K++A M G+ D Y T +GY K + AL + R+ E + Y+ ++
Sbjct: 535 KLLASM-VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII-TYNIILQ 592
Query: 302 ----TQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
T+ A + V + L YN ++ L K + + A ++F+
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELSTYN----IILHGLCKNNLTDEALRMFQNLCLT 648
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+L + R N +I A + G +A+ L G P+VRT+ LMA ++
Sbjct: 649 DLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIE 701
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 122/299 (40%), Gaps = 25/299 (8%)
Query: 139 ASYFNCVPEKLKLPSVYIALLNAYACA--KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNV 196
A+ N + + ++ ++ L CA ++++ +I++++M G + YN ++
Sbjct: 112 AALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKG 171
Query: 197 YYQTGNYKKLDSLMHEMEEKGIDC--DKYTFSILLSACAAASDGEGIDKIVAMMEA--DR 252
++ L+ M + G DC D +++ +++ D +DK DR
Sbjct: 172 LCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD---LDKAYGTYHEMLDR 228
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGN 309
G++ + Y++ + KA DKA+ VL M+ N R Y+ ++ Y + G
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTS----MVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 310 KDDVLRVWKR-----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
+ + K+ + ++ YN ++ L K A K+F+ R L +I
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNS----LMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
L+ Y +G L + L+ G PN + ++ Y + + ++ + K
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 132/323 (40%), Gaps = 31/323 (9%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ L+ AYA ++A ++ +MR +GL T+ Y +++ + ++G + +M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Query: 214 EEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
++ + + S++ S C + + I+ M+ DRG+ LD + + + K G
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML--DRGICLDTIFFNSIIDSHCKEG 493
Query: 273 -------LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY----- 320
L D + + K +++ Y +I Y G D+ ++
Sbjct: 494 RVIESEKLFDLMVRIGVKPDII--------TYSTLIDGYCLAGKMDEATKLLASMVSVGM 545
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
K + YN +I+ K ME A +F E ES + DI N ++ +
Sbjct: 546 KPDCVTYNT----LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKEC 440
A+ L GT+ + T+ ++ G +NN +++ + M + L L + +
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR-MFQNLCLTDLQLETRTFNIM 660
Query: 441 LAACLGYYKKERDIEGADYFIKL 463
+ A L K R+ E D F L
Sbjct: 661 IGALL---KVGRNDEAKDLFAAL 680
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 126/306 (41%), Gaps = 16/306 (5%)
Query: 95 LYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI---------AKVQGIEQAASYFNCV 145
+Y H+L I K +L D I LD I K + ++ F+ +
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505
Query: 146 PEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
P + Y L++ Y A ++A ++ M G+ + YN+++N Y +
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI-VAMMEADRGVVLDWTVYA 262
+ L EME G+ D T++I+L ++ V + E+ G L+ + Y
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES--GTQLELSTYN 623
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ 322
G K L+D+AL + + + + + +R ++ +I G D+ ++
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLE-TRTFNIMIGALLKVGRNDEAKDLFAALSA 682
Query: 323 NLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
N V + R Y + +L++ +E + +F E + R+ N ++ +RG + +
Sbjct: 683 NGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITR 742
Query: 382 AETLIY 387
A T ++
Sbjct: 743 AGTYLF 748
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 143/333 (42%), Gaps = 54/333 (16%)
Query: 121 DVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSA---EKAEIIMQQ 177
D AI++ KV G++ +N V + AC K ++ I ++
Sbjct: 239 DEAIKVFESMKVSGLKPNLVTYNAVID---------------ACGKGGVEFKRVVEIFEE 283
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
M G+ I YNS++ V + G ++ +L +EM ++GID D +T++ LL A
Sbjct: 284 MLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQ 343
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-------------S 284
+ +I+ M + ++ + Y+T A GY KAG + AL + + +
Sbjct: 344 MDLAYEIMLEMPGKK-ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYN 402
Query: 285 EVLMMHNKFSR---------------------AYDFVITQYAACGNKDDVLRVWKRYKQN 323
+L ++ K R Y+ ++ Y G ++V RV+K K++
Sbjct: 403 TLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKD 462
Query: 324 LKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
N Y +I K E A ++F E++ L D+ + + LI+A C+ GL+ A
Sbjct: 463 RVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSA 522
Query: 383 ETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
L+ + G PNV T+ + + ++ +E
Sbjct: 523 VLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAE 555
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 121/272 (44%), Gaps = 6/272 (2%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEM 213
+ AL++AY + ++A + + M+ GL + YN++++ + G +K++ + EM
Sbjct: 225 FSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEM 284
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
G+ D+ T++ LL+ C+ E + M DRG+ D Y T K G
Sbjct: 285 LRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEM-IDRGIDQDVFTYNTLLDAVCKGGQ 343
Query: 274 SDKALAV-LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGY 331
D A + L ++ N + Y + YA G +D L ++ K + + Y
Sbjct: 344 MDLAYEIMLEMPGKKILPNVVT--YSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSY 401
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
++S K E A K+ +E S + D+ N L+D Y ++G ++ + + +
Sbjct: 402 NTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKK 461
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
PN+ T+ + Y + + E+ +E ++
Sbjct: 462 DRVFPNLLTYSTLIDVYSKGSLYEEAMEVFRE 493
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 132/288 (45%), Gaps = 28/288 (9%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y AL+NAY + +AE + +M RG++ TI YNSM++ + + + +
Sbjct: 317 PNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHM 376
Query: 210 MHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ M KG D +TF+ L+ C A +G + + M E G+V D T Y T G+
Sbjct: 377 FYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTET--GLVADTTTYNTLIHGF 434
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY---AACGN---KD--DVLRVWKRY 320
G + AL + ++ M+ + D V C N KD ++ + ++
Sbjct: 435 CLVGDLNAALDLSQQ----MISSGVCP--DIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 488
Query: 321 KQNL---KVYN------RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
K +L + +N + Y +IS L+ AE++++E R + + + +I+
Sbjct: 489 KMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMIN 548
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
C++ L +A + + P+V T+ + +GY + + + G+E
Sbjct: 549 GLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLE 596
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 108/274 (39%), Gaps = 18/274 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y A+++ A + +M+++G+ YN M++ + +G + + L+ EM
Sbjct: 251 IYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEM 310
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E+ I+ + T+S L++A +++ M RG++ + Y + G+ K
Sbjct: 311 LERKINPNVVTYSALINAYVKERKFFEAEELYDEM-LPRGIIPNTITYNSMIDGFCKQNR 369
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK---DDVLRVWKRYKQNLKVYNRG 330
D A + V+ + F CG K D + + + L
Sbjct: 370 LDAAEHMFY---VMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTT 426
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I + +A + ++ S +C DI N L+D C G L A + Q
Sbjct: 427 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 486
Query: 391 -----------LRGTEPNVRTWYLMATGYLQNNQ 413
G EP+V+T+ ++ +G + +
Sbjct: 487 KSKMDLDASRPFNGVEPDVQTYNILISGLINEGK 520
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 102/240 (42%), Gaps = 8/240 (3%)
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
+ + ++MN + G + +L+ M E G+ ++ T+ ++ D ++
Sbjct: 179 VTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRK 238
Query: 248 MEADRGVVLDWTVYATAASGYVKAGL-SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
ME + + +Y+ G K G SD E + + F+ Y+ +I + +
Sbjct: 239 MEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFT--YNCMIDGFCS 296
Query: 307 CGNKDDVLRVWKRY---KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
G + R+ + K N V Y +I++ +K AE++++E R + +
Sbjct: 297 SGRWSEAQRLLQEMLERKINPNVVT--YSALINAYVKERKFFEAEELYDEMLPRGIIPNT 354
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
N +ID +C++ L AE + Y +G P+V T+ + GY + + G E + +
Sbjct: 355 ITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHE 414
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 93/235 (39%), Gaps = 21/235 (8%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D LL + E G D +I F L + AL +S M + P V
Sbjct: 406 DDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSG---VCPDIVTC 462
Query: 125 R--LDLIAKVQGIEQAASYFNCVPE-KLKL----------PSV--YIALLNAYACAKSAE 169
LD + ++ A F + + K+ L P V Y L++
Sbjct: 463 NTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFL 522
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+AE + ++M RG+V TI Y+SM+N + + + M K D TF+ L+
Sbjct: 523 EAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLV 582
Query: 230 SA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
S C A +G++ M RG+V D Y T G+ K G + AL + ++
Sbjct: 583 SGYCKAGRVDDGLELFCEM--GRRGIVADAITYITLIHGFRKVGNINGALDIFQE 635
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 118/263 (44%), Gaps = 17/263 (6%)
Query: 151 LPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
LP V Y +LLN Y A + ++A ++ +R GL + YN +++ Y + G+ ++
Sbjct: 369 LPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARR 428
Query: 209 LMHEMEEKGIDCDKYTFSILL----SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
L EM E+G D YT++IL+ + C+ A E D++++ +G+ D Y T
Sbjct: 429 LKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLS-----KGLRPDCFAYNTR 483
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSR--AYDFVITQYAACGNKDDVLRVWKRYKQ 322
+ G K+ + EV+M+ S Y+ +I GN D + +
Sbjct: 484 ICAEITLGDISKSFQL---REVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMIS 540
Query: 323 N-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
N L+ Y C+I + + + A K F + S L +I AYCRRG L+
Sbjct: 541 NGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYS 600
Query: 382 AETLIYKAQLRGTEPNVRTWYLM 404
A K G EPN T+ ++
Sbjct: 601 AYGWFRKMLEEGVEPNEITYNVL 623
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 107/244 (43%), Gaps = 20/244 (8%)
Query: 175 MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAA 234
++M G+ D N ++ V + + ++ EM + GI+ T++ LL + +
Sbjct: 184 FREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSK 243
Query: 235 ASDGEGIDKIVAMMEADRGVVLDWTV-YATAASGYVKAGLSDKALAVLRKSEVLMMHNKF 293
+ ID ++ MEA L V Y +G + G ++A ++ + + + F
Sbjct: 244 EGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKASSF 303
Query: 294 SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-------YICVISSLLKFDGMES 346
+ Y+ +IT A G V K L++ N G Y +I LL+ +E+
Sbjct: 304 T--YNPLITGLLARG------FVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEA 355
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR--GTEPNVRTWYLM 404
A+ F E + L D+ N L++ YC+ G ++ E L+ LR G P V T+ ++
Sbjct: 356 AQAKFVEMRAMGLLPDVITYNSLLNGYCKAG--NQKEALLLFGDLRRAGLAPTVLTYNIL 413
Query: 405 ATGY 408
GY
Sbjct: 414 IDGY 417
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 36/253 (14%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
PS +A++ A + +AE + +++R+ G +T YN+++ Y +TG+ K + ++
Sbjct: 292 PSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVS 351
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
EME+ G+ D+ T+S+L+ A A A E ++ MEA V + VY+ + Y
Sbjct: 352 EMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEAS-NVEPNSYVYSRILASYRDK 410
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
G K+ VL+ M N F Y
Sbjct: 411 GEWQKSFQVLKD----MKSNGVQPDRHF-------------------------------Y 435
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I + K++ ++ A FE S + D N LI+ +C+ G + AE L + Q
Sbjct: 436 NVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQ 495
Query: 392 RGTEPNVRTWYLM 404
RG P + T+ +M
Sbjct: 496 RGYSPCITTYNIM 508
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 95/235 (40%), Gaps = 21/235 (8%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++AYA A E A I++++M + + Y+ ++ Y G ++K ++ +M
Sbjct: 364 TYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDM 423
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKA 271
+ G+ D++ +++++ + +D +A E G+ D + T + + K+
Sbjct: 424 KSNGVQPDRHFYNVMIDTFGKYN---CLDHAMATFERMLSEGIRPDTVTWNTLINCHCKS 480
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW--------KRYKQN 323
G + A + + + R Y IT Y N + W K Q
Sbjct: 481 GRHNMAEELFGEMQ--------QRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQG 532
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
L + Y ++ K A + E +S + N LI+AY +RGL
Sbjct: 533 LLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGL 587
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 115/259 (44%), Gaps = 11/259 (4%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS--- 208
P Y AL+ A A EKA +M +MR G ++Y+S++ Y N K+DS
Sbjct: 185 PLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQ-YLTRSN--KIDSPIL 241
Query: 209 --LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAAS 266
L E+E I+ D + + ++ + A D + +AM +++ G+ +
Sbjct: 242 QKLYTEIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSN-GLNPKPSTLVAVIL 300
Query: 267 GYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN-KDDVLRVWKRYKQNLK 325
+G + +A A+ + + +RAY+ ++ Y G+ KD V + K +K
Sbjct: 301 ALGNSGRTHEAEALFEEIRENGSEPR-TRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVK 359
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+ Y +I + ESA + +E E+ N+ + + + ++ +Y +G K+ +
Sbjct: 360 PDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQV 419
Query: 386 IYKAQLRGTEPNVRTWYLM 404
+ + G +P+ + +M
Sbjct: 420 LKDMKSNGVQPDRHFYNVM 438
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 128/283 (45%), Gaps = 5/283 (1%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K Q +++A + + +P+ Y ++++ Y + ++A +++M G+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ YNS+M+ + G + + M ++G+ + T+ LL A + ++
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
+M G+ + V++ Y K G D+A+ V K + N + Y VI
Sbjct: 364 LM-VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL-NPDTVTYGTVIGILCK 421
Query: 307 CGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
G +D +R +++ + L N Y +I SL FD + A+++ E R +C D
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
N +ID++C+ G + ++E L G +P++ T+ + GY
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 524
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 150/353 (42%), Gaps = 18/353 (5%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV--AI 124
M LLD V G + I+I + + A+ + M ++ L P V
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG---LNPDTVTYGT 414
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+ ++ K +E A YF + ++ P VY +L+++ +KA+ ++ +M DRG
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ TI +NS+++ + + G + + L M G+ D T+S L+ A +
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVI- 301
K++A M G+ D Y T +GY K + AL + R+ E + Y+ ++
Sbjct: 535 KLLASM-VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII-TYNIILQ 592
Query: 302 ----TQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
T+ A + V + L YN ++ L K + + A ++F+
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELSTYN----IILHGLCKNNLTDEALRMFQNLCLT 648
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+L + R N +I A + G +A+ L G P+VRT+ LMA ++
Sbjct: 649 DLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIE 701
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 112/274 (40%), Gaps = 25/274 (9%)
Query: 164 CA--KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC- 220
CA ++++ +I++++M G + YN ++ ++ L+ M + G DC
Sbjct: 137 CADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCP 196
Query: 221 -DKYTFSILLSACAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKA 277
D +++ +++ D +DK DRG++ + Y++ + KA DKA
Sbjct: 197 PDVVSYTTVINGFFKEGD---LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKA 253
Query: 278 LAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKR-----YKQNLKVYNR 329
+ VL M+ N R Y+ ++ Y + G + + K+ + ++ YN
Sbjct: 254 MEVLTS----MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
++ L K A K+F+ R L +I L+ Y +G L + L+
Sbjct: 310 ----LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G PN + ++ Y + + ++ + K
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 132/323 (40%), Gaps = 31/323 (9%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ L+ AYA ++A ++ +MR +GL T+ Y +++ + ++G + +M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Query: 214 EEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
++ + + S++ S C + + I+ M+ DRG+ LD + + + K G
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML--DRGICLDTIFFNSIIDSHCKEG 493
Query: 273 -------LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY----- 320
L D + + K +++ Y +I Y G D+ ++
Sbjct: 494 RVIESEKLFDLMVRIGVKPDII--------TYSTLIDGYCLAGKMDEATKLLASMVSVGM 545
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
K + YN +I+ K ME A +F E ES + DI N ++ +
Sbjct: 546 KPDCVTYNT----LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKEC 440
A+ L GT+ + T+ ++ G +NN +++ + M + L L + +
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR-MFQNLCLTDLQLETRTFNIM 660
Query: 441 LAACLGYYKKERDIEGADYFIKL 463
+ A L K R+ E D F L
Sbjct: 661 IGALL---KVGRNDEAKDLFAAL 680
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 126/306 (41%), Gaps = 16/306 (5%)
Query: 95 LYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI---------AKVQGIEQAASYFNCV 145
+Y H+L I K +L D I LD I K + ++ F+ +
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505
Query: 146 PEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
P + Y L++ Y A ++A ++ M G+ + YN+++N Y +
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI-VAMMEADRGVVLDWTVYA 262
+ L EME G+ D T++I+L ++ V + E+ G L+ + Y
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES--GTQLELSTYN 623
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ 322
G K L+D+AL + + + + + +R ++ +I G D+ ++
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLE-TRTFNIMIGALLKVGRNDEAKDLFAALSA 682
Query: 323 NLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
N V + R Y + +L++ +E + +F E + R+ N ++ +RG + +
Sbjct: 683 NGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITR 742
Query: 382 AETLIY 387
A T ++
Sbjct: 743 AGTYLF 748
>gi|15240649|ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1006; Flags: Precursor
gi|9759030|dbj|BAB09399.1| unnamed protein product [Arabidopsis thaliana]
gi|332008538|gb|AED95921.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 723
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 148/317 (46%), Gaps = 17/317 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ L+ ++ E+A +I +M +G+ TI YN++M+ Y ++ + ++++ L EM
Sbjct: 346 VFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEM 405
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA-G 272
+KG+ T++IL+ A A + ++ ++ ME D G+ + Y S Y +
Sbjct: 406 RDKGLKPSAATYNILMDAYARRMQPDIVETLLREME-DLGLEPNVKSYTCLISAYGRTKK 464
Query: 273 LSDKAL-AVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRG 330
+SD A A LR +V + + S +Y +I Y+ G + ++ K+ +K
Sbjct: 465 MSDMAADAFLRMKKVGLKPS--SHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVET 522
Query: 331 YICVISSLLKFDGMESAEKIFEEWE--SRNLCHDIRIP-NHLIDAYCRRGLLHKAETLIY 387
Y V+ + F K+ E W+ R RI N L+D + ++GL +A ++
Sbjct: 523 YTSVLDA---FRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVS 579
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGY 447
+ G +P+V T+ ++ Y + Q K + +K+ A KP + +
Sbjct: 580 EFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEM-----AALNLKPDSITYSTMIYA 634
Query: 448 YKKERDIEGADYFIKLL 464
+ + RD + A ++ K++
Sbjct: 635 FVRVRDFKRAFFYHKMM 651
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 182/443 (41%), Gaps = 55/443 (12%)
Query: 64 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA 123
+D+M +L + E G ++ I++K R AL++ + M +P DV
Sbjct: 139 SDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALEL-LHMMADDRGGGSPPDVV 197
Query: 124 IRLDLIA---KVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQM 178
+I K ++A S ++ + ++ LP V Y +++ A A++ +KA ++ M
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTM 257
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG 238
G++ + YNS+++ Y +G K+ + +M G++ D T+S+L+
Sbjct: 258 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC 317
Query: 239 EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR--- 295
KI M RG+ + T Y T GY G AL + LM+ N
Sbjct: 318 MEARKIFDSM-TKRGLKPEITTYGTLLQGYATKG----ALVEMHGLLDLMVRNGIHPDHY 372
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNR--GYIC----VISSLLKFDGM 344
+ +I YA G D + V+ + +Q N Y G +C V ++L F+ M
Sbjct: 373 VFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 345 -------------------------ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
E AE++ E R +C + N +ID++C+ G +
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Query: 380 HKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKE 439
++E L G +PNV T+ + GY + + EAMK ++ G KP+
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD---EAMKLLSGMVSVG--LKPNTV 547
Query: 440 CLAACLGYYKKERDIEGADYFIK 462
+ + Y K +E A K
Sbjct: 548 TYSTLINGYCKISRMEDALVLFK 570
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 152/351 (43%), Gaps = 24/351 (6%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV--AI 124
M LLD V G D I+I + + A+ + M ++ L P V
Sbjct: 355 MHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQG---LNPNAVTYGA 411
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+ ++ K +E A YF + ++ P VY +L++ E+AE ++ +M DRG
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI 241
+ TI +NS+++ + + G + + L M G+ + T++ L++ C A E +
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV------LMMHNKFSR 295
+ M+ G+ + Y+T +GY K + AL + ++ E ++ +N +
Sbjct: 532 KLLSGMVSV--GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
F + AA K+ +R+ + Q L YN ++ L K + A ++F+
Sbjct: 590 GL-FQTRRTAAA--KELYVRITESGTQIELSTYN----IILHGLCKNKLTDDALQMFQNL 642
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
+L + R N +IDA + G +A+ L G PN T+ LMA
Sbjct: 643 CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMA 693
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 143/333 (42%), Gaps = 54/333 (16%)
Query: 121 DVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSA---EKAEIIMQQ 177
D AI++ KV G++ +N V + AC K ++ I ++
Sbjct: 239 DEAIKVFESMKVSGLKPNLVTYNAVID---------------ACGKGGVEFKRVVEIFEE 283
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
M G+ I YNS++ V + G ++ +L +EM ++GID D +T++ LL A
Sbjct: 284 MLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQ 343
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-------------S 284
+ +I+ M + ++ + Y+T A GY KAG + AL + + +
Sbjct: 344 MDLAYEIMLEMPGKK-ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYN 402
Query: 285 EVLMMHNKFSR---------------------AYDFVITQYAACGNKDDVLRVWKRYKQN 323
+L ++ K R Y+ ++ Y G ++V RV+K K++
Sbjct: 403 TLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKD 462
Query: 324 LKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
N Y +I K E A ++F E++ L D+ + + LI+A C+ GL+ A
Sbjct: 463 RVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSA 522
Query: 383 ETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
L+ + G PNV T+ + + ++ +E
Sbjct: 523 VLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAE 555
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 121/272 (44%), Gaps = 6/272 (2%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEM 213
+ AL++AY + ++A + + M+ GL + YN++++ + G +K++ + EM
Sbjct: 225 FSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEM 284
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
G+ D+ T++ LL+ C+ E + M DRG+ D Y T K G
Sbjct: 285 LRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEM-IDRGIDQDVFTYNTLLDAVCKGGQ 343
Query: 274 SDKALAV-LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGY 331
D A + L ++ N + Y + YA G +D L ++ K + + Y
Sbjct: 344 MDLAYEIMLEMPGKKILPNVVT--YSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSY 401
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
++S K E A K+ +E S + D+ N L+D Y ++G ++ + + +
Sbjct: 402 NTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKK 461
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
PN+ T+ + Y + + E+ +E ++
Sbjct: 462 DRVFPNLLTYSTLIDVYSKGSLYEEAMEVFRE 493
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 137/316 (43%), Gaps = 41/316 (12%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P +++ + + + A ++ +M G+ + YNS+++ Y + + ++ L+
Sbjct: 132 PLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLE 191
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
ME GI+ T++IL+ + + A D ++ +V M+A + V D +Y + Y +A
Sbjct: 192 IMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKA-KNVAGDVYLYTAVINAYCRA 250
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
G V R SEV +D + GN ++ R Y
Sbjct: 251 G------NVRRASEV----------FDECV------GN-------------GIEPNERTY 275
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I+ K ME+AE + + + R + H+ I N +ID YCR+G++ A + +
Sbjct: 276 GVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEK 335
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKE 451
G E +V T+ +A G + N+ EA +++E G P+ + + KE
Sbjct: 336 MGIELDVYTYNTLACGLCRVNRM---AEAKTLLHIMIEKGV--PPNYVTYTTLISIHCKE 390
Query: 452 RDIEGADYFIKLLTGK 467
D+ A + + GK
Sbjct: 391 GDMVEARRLFREMAGK 406
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 117/271 (43%), Gaps = 21/271 (7%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
Y L+++ + A K E ++ +M+ + + Y +++N Y + GN ++ + E
Sbjct: 203 GTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDE 262
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
GI+ ++ T+ +L++ E + ++A M+ RGV + ++ T GY + G
Sbjct: 263 CVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQG-RGVGHNQIIFNTMIDGYCRQG 321
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY---NR 329
+ D AL V E K D ACG + RV + + ++ +
Sbjct: 322 MVDNALKVKAAME------KMGIELDVYTYNTLACG----LCRVNRMAEAKTLLHIMIEK 371
Query: 330 G-------YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
G Y +IS K M A ++F E + + N ++D Y ++G + +A
Sbjct: 372 GVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREA 431
Query: 383 ETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
E + + +G P+V T+ + G+ N +
Sbjct: 432 ERFRKEMEKKGLVPDVYTYASLVHGHCVNGK 462
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ +V + +A + + + EK P+ Y L++ + +A + ++M +G +
Sbjct: 352 LCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPS 411
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIV 245
+ YN MM+ Y + G+ ++ + EME+KG+ D YT++ L+ C +D +
Sbjct: 412 VVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGK----VDVAL 467
Query: 246 AMMEA--DRGVVLDWTVYATAASGYVKAGLSDKAL 278
+ E RG + Y SG K G S++A
Sbjct: 468 KLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAF 502
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 112/253 (44%), Gaps = 36/253 (14%)
Query: 156 IALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEE 215
+++++A A + +AE + +++R G+ +T YN+++ Y +TG K +S++ EME+
Sbjct: 279 VSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEK 338
Query: 216 KGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
+G+ D++T+S+L+ A A E ++ MEA V + V++ +G+ G
Sbjct: 339 RGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG-DVQPNSFVFSRLLAGFRDRGEWQ 397
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVI 335
K VL+ + + G K D + Y VI
Sbjct: 398 KTFQVLK--------------------EMKSIGVKPD---------------RQFYNVVI 422
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
+ KF+ ++ A F+ S + D N LID +C+ G AE + + RG
Sbjct: 423 DTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL 482
Query: 396 PNVRTWYLMATGY 408
P T+ +M Y
Sbjct: 483 PCATTYNIMINSY 495
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 113/273 (41%), Gaps = 36/273 (13%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P Y AL+ A A EKA ++ +MR G ++Y+ ++ ++ K+DS+M
Sbjct: 168 PLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSN---KIDSVML 224
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
K I+ DK +E D +V D + G+ K+
Sbjct: 225 LRLYKEIERDK-------------------------LELDVQLVNDIIM------GFAKS 253
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRG 330
G KAL +L ++ + K + +I+ A G + +++ +Q+ +K R
Sbjct: 254 GDPSKALQLLGMAQATGLSAKTATLVS-IISALADSGRTLEAEALFEELRQSGIKPRTRA 312
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y ++ +K ++ AE + E E R + D + LIDAY G A ++ + +
Sbjct: 313 YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME 372
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+PN + + G+ + +K + +K+
Sbjct: 373 AGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 405
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 56/304 (18%), Positives = 124/304 (40%), Gaps = 18/304 (5%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ALL Y + AE ++ +M RG+ Y+ +++ Y G ++ ++ EME
Sbjct: 313 YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME 372
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ + + FS LL+ + + +++ M++ GV D Y + K
Sbjct: 373 AGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS-IGVKPDRQFYNVVIDTFGKFNCL 431
Query: 275 DKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNK---DDVLRVWKRYKQNLKVYN 328
D A+ + M+ ++ +I + G +++ +R +
Sbjct: 432 DHAMTTFDR----MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER--RGCLPCA 485
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y +I+S + + +++ + +S+ + ++ L+D Y + G + A + +
Sbjct: 486 TTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE 545
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYY 448
+ G +P+ + + Y Q SE+ V A + V+ G KPS L + + +
Sbjct: 546 MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR---VMTSDG--LKPSLLALNSLINAF 600
Query: 449 KKER 452
++R
Sbjct: 601 GEDR 604
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 121/260 (46%), Gaps = 8/260 (3%)
Query: 168 AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSI 227
+ A ++ M ++G+ + YN+MM + + N S+ EM EKG+ + +T+SI
Sbjct: 465 VDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSI 524
Query: 228 LLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
L+ D + +++ M A + +Y T +G K G + KA +L+ L
Sbjct: 525 LIDGFFKNQDEQNAWEVINQMIAS-NFEANEVIYNTIINGLCKVGQTSKAKEMLQN---L 580
Query: 288 MMHNKFS---RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDG 343
+ ++S +Y+ +I + G+ D + ++ +N N + +I+ K +
Sbjct: 581 IKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNR 640
Query: 344 MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYL 403
M+ A ++ E +S++L D+ LID +C++ + A TL + G PNV +
Sbjct: 641 MDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNN 700
Query: 404 MATGYLQNNQSEKGVEAMKK 423
+ +G+ + + ++ KK
Sbjct: 701 LISGFRNLGKMDAAIDLYKK 720
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/267 (17%), Positives = 101/267 (37%), Gaps = 43/267 (16%)
Query: 163 ACAKSA--EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
AC K E+A + +M G+ I S++ + K + MEE+G+
Sbjct: 319 ACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAP 378
Query: 221 DKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV 280
DK FS+++ + E +I M++ G+ + G +KA + AL +
Sbjct: 379 DKVMFSVMIEWFCKNMEMEKAVEIYKRMKS-VGIAPSSVLVHKMIQGCLKAESPEAALEI 437
Query: 281 LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC--VISSL 338
+D W + G++C + L
Sbjct: 438 F-----------------------------NDSFETWIAH---------GFMCNKIFLLL 459
Query: 339 LKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
K +++A E++ + ++ N+++ A+CR + A ++ + +G +PN
Sbjct: 460 CKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNN 519
Query: 399 RTWYLMATGYLQNNQSEKGVEAMKKAL 425
T+ ++ G+ +N + E + + +
Sbjct: 520 FTYSILIDGFFKNQDEQNAWEVINQMI 546
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 21/178 (11%)
Query: 148 KLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLD 207
KL +P+ Y AL++ + + A + ++ + GL+ YN++++ + G
Sbjct: 657 KLDVPA-YGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAI 715
Query: 208 SLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI------DKIVAMMEADRGVVLDWTVY 261
L +M GI CD +T++ ++ DG I +++A+ G+V D +Y
Sbjct: 716 DLYKKMVNDGISCDLFTYTTMIDGL--LKDGNLILASDLYSELLAL-----GIVPDEILY 768
Query: 262 ATAASGYVKAGL---SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV 316
+G K G + K L ++K + Y VI + GN ++ RV
Sbjct: 769 VVLVNGLSKKGQFVRASKMLEEMKKKDA----TPNVLIYSTVIAGHHREGNLNEAFRV 822
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 128/291 (43%), Gaps = 18/291 (6%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ + E+A ++ +M + GL + Y +++ G+ + L+H ME
Sbjct: 250 YTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
G+ + +TFS+L+ A E + + +GV ++ VY + G K G
Sbjct: 310 TNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSL-VKKGVKVNEVVYTSLIDGLCKTGKI 368
Query: 275 DKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNK---DDVLRVWKRYKQNLKVYN 328
D A +++K M+ F + +Y +I C K L + ++ ++
Sbjct: 369 DAADELMQK----MISEGFVPDAHSYSSLID--GLCRQKKLSQATLMLEDMMEKGIQASP 422
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y +I L++ G E +KIF++ + + DI + +YC G + AE++I +
Sbjct: 423 VTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQ 482
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKE 439
RG PN+ T+ + GY + G+ + + + G WKP+++
Sbjct: 483 MVDRGVFPNLVTYNTLIRGY-----ANLGLVSQAFSTFEVMVGKGWKPNED 528
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 121/329 (36%), Gaps = 46/329 (13%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+NAY A A+ + + GL + Y S + Y + G + M
Sbjct: 75 YTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP 134
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+G +T++ LL A + M AD D VYAT G +AG +
Sbjct: 135 LRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRAD-SCAPDTHVYATMVHGLCEAGRT 193
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
++A +L ++ M N F + N+ VYN +
Sbjct: 194 EEAEVLLEEA----MSNGF---------------------------EPNIVVYNA----L 218
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I ME A K+FE + ++R LI C+ G + +A L + G
Sbjct: 219 IDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGL 278
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDI 454
EPNV T+ T +Q +E ++ + L L+E P+ + + K +
Sbjct: 279 EPNVVTY----TALIQGQCNEGHLQCAFRLLHLMETNG-LVPNDWTFSVLIDALCKREKV 333
Query: 455 EGADYFIKLLTGK-----EIISADLQDRL 478
E A F+ L K E++ L D L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGL 362
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 117/309 (37%), Gaps = 56/309 (18%)
Query: 117 LTPAD--VAIRLDLIAKVQGIEQAASYFNCVPEK-LKLPSV-YIALLNAYACAKSAEKAE 172
L P D ++ +D + K + +E+A + + +K +K+ V Y +L++ + A+
Sbjct: 313 LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAAD 372
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+MQ+M G V Y+S+++ + + ++ +M EKGI T++I++
Sbjct: 373 ELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDEL 432
Query: 233 AAASDGEGIDKIVAMMEA----------------------------------DRGVVLDW 258
EG KI M A DRGV +
Sbjct: 433 VREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNL 492
Query: 259 TVYATAASGYVKAGLSDKALAVLRKSEVLMMHN--KFSRAYDFVITQYAACGNKDDVLRV 316
Y T GY GL +A + EV++ +Y ++ + D+ + +
Sbjct: 493 VTYNTLIRGYANLGLVSQAFSTF---EVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI 549
Query: 317 WKR-------------YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
WK ++ L + Y C I L + D +E A+ F ++ NL
Sbjct: 550 WKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSE 609
Query: 364 RIPNHLIDA 372
+ +ID
Sbjct: 610 DVYTSIIDC 618
>gi|428179975|gb|EKX48844.1| hypothetical protein GUITHDRAFT_68401 [Guillardia theta CCMP2712]
Length = 396
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 139/312 (44%), Gaps = 10/312 (3%)
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRG 182
L +A ++ +QA SY + +P+V Y ++AY E AE I M G
Sbjct: 17 HLKALALLRRPDQAYSYLTRMKSDGIMPNVWAYTTCIDAYCKVGDMEMAENIKSMMISSG 76
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ + ++M Y + GN++ L+ + M+++ I D Y SIL+ + D E +
Sbjct: 77 IEPTLATFTTLMKGYAKYGNHEALEHYLEIMQQENIMIDSYIVSILIDSFVNKGDMERAE 136
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR--KSEVLMMHNKFSRAYDFV 300
I+ EA+ +L +YA+ GY + G+ D+ +A++ KS+ L + + Y+ +
Sbjct: 137 AILREKEAEDPSLLSSHLYASLIKGYGRKGMIDRCMALMEEMKSKQLKVS---AVPYNTL 193
Query: 301 ITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
I+ D + ++ ++ ++ Y +I + A+ FE E +
Sbjct: 194 ISALLESKRMDQAQKTLEQMEEAGIQPSVVTYTLLIHEFSSAGNVAQAQAAFETMERSGI 253
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE--KG 417
D N L+D Y G + + + +K +P++ T+ +M L ++ S+ K
Sbjct: 254 FPDTGAYNALLDGYASLGQTARMKEIFWKLMQSANKPSIETYSIMIKCLLHSDASDDAKK 313
Query: 418 VEAMKKALVLLE 429
E +++ + L+
Sbjct: 314 SENLRECMSFLD 325
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 112/253 (44%), Gaps = 36/253 (14%)
Query: 156 IALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEE 215
+++++A A + +AE + +++R G+ +T YN+++ Y +TG K +S++ EME+
Sbjct: 308 VSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEK 367
Query: 216 KGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
+G+ D++T+S+L+ A A E ++ MEA V + V++ +G+ G
Sbjct: 368 RGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG-DVQPNSFVFSRLLAGFRDRGEWQ 426
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVI 335
K VL+ + + G K D + Y VI
Sbjct: 427 KTFQVLK--------------------EMKSIGVKPD---------------RQFYNVVI 451
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
+ KF+ ++ A F+ S + D N LID +C+ G AE + + RG
Sbjct: 452 DTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL 511
Query: 396 PNVRTWYLMATGY 408
P T+ +M Y
Sbjct: 512 PCATTYNIMINSY 524
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 113/273 (41%), Gaps = 36/273 (13%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P Y AL+ A A EKA ++ +MR G ++Y+ ++ ++ K+DS+M
Sbjct: 197 PLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSN---KIDSVML 253
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
K I+ DK +E D +V D + G+ K+
Sbjct: 254 LRLYKEIERDK-------------------------LELDVQLVNDIIM------GFAKS 282
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRG 330
G KAL +L ++ + K + +I+ A G + +++ +Q+ +K R
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVS-IISALADSGRTLEAEALFEELRQSGIKPRTRA 341
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y ++ +K ++ AE + E E R + D + LIDAY G A ++ + +
Sbjct: 342 YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME 401
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+PN + + G+ + +K + +K+
Sbjct: 402 AGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 434
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 56/304 (18%), Positives = 124/304 (40%), Gaps = 18/304 (5%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ALL Y + AE ++ +M RG+ Y+ +++ Y G ++ ++ EME
Sbjct: 342 YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME 401
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ + + FS LL+ + + +++ M++ GV D Y + K
Sbjct: 402 AGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS-IGVKPDRQFYNVVIDTFGKFNCL 460
Query: 275 DKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNK---DDVLRVWKRYKQNLKVYN 328
D A+ + M+ ++ +I + G +++ +R +
Sbjct: 461 DHAMTTFDR----MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER--RGCLPCA 514
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y +I+S + + +++ + +S+ + ++ L+D Y + G + A + +
Sbjct: 515 TTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE 574
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYY 448
+ G +P+ + + Y Q SE+ V A + V+ G KPS L + + +
Sbjct: 575 MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR---VMTSDG--LKPSLLALNSLINAF 629
Query: 449 KKER 452
++R
Sbjct: 630 GEDR 633
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 145/358 (40%), Gaps = 42/358 (11%)
Query: 64 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA 123
ND+M LL + V+ G P D+ I+ F + A + M + N +
Sbjct: 249 NDAM-DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGR-NVMPNTVTFT 306
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDR 181
I +D + K + +A F + +K P+ Y AL++ Y ++A+ ++ M D+
Sbjct: 307 ILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDK 366
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEG 240
G YN ++N Y + + SL+ EM EK + D T+S L+ C E
Sbjct: 367 GCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEA 426
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
++ M + G++ D Y+T G K G D+AL +L+ +
Sbjct: 427 LNLFKEMCSS--GLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQ--------------- 469
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
+ + ++ +YN +I + +E A+++F + + +
Sbjct: 470 ----------------ESKIEPDIVLYN----ILIEGMFIAGKLEVAKELFSKLFADGIQ 509
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
IR +I + GL +A L K + G PN ++ ++ G+LQN S +
Sbjct: 510 PTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAI 567
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 132/332 (39%), Gaps = 32/332 (9%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PSV + L + A K + QM G+ N ++N + + S+
Sbjct: 90 PSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISV 149
Query: 210 MHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ +M + GI D TF+ L++ C E + M+ RG D Y+T +G
Sbjct: 150 LGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVR--RGHQPDVISYSTVINGL 207
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSR----AYDFVITQYAACGNKDDVLRVWKRYKQNL 324
K+G + AL +LRK M K + AY +I +D + +
Sbjct: 208 CKSGNTSMALQLLRK-----MEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLS------ 256
Query: 325 KVYNRG-------YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
++ +RG Y ++ + A +F E RN+ + L+D C+ G
Sbjct: 257 EMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEG 316
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPS 437
++ +A + +G EPN T+ + GY NNQ + EA K ++++ G P
Sbjct: 317 MVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMD---EAQKVLDIMVDKG--CAPV 371
Query: 438 KECLAACLGYYKKERDIEGADYFIKLLTGKEI 469
+ Y K R ++ A + ++ KE+
Sbjct: 372 VHSYNILINGYCKRRRLDEAKSLLVEMSEKEL 403
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 119/280 (42%), Gaps = 23/280 (8%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ L+N ++A + +M RG I Y++++N ++GN L+ +ME
Sbjct: 165 FNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKME 224
Query: 215 EKGIDCDKYTFSILL-SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
EKG + ++ ++ S C + +D + M+ DRG+ D Y+T G+ G
Sbjct: 225 EKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMV--DRGIPPDVVTYSTILHGFCSLGH 282
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC--GNKDDVLRVW-----KRYKQNLKV 326
++A + + ++ N F I C G + V+ K + N
Sbjct: 283 LNEATILFNE---MVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYT 339
Query: 327 YNR---GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
YN GY C+ + M+ A+K+ + + + N LI+ YC+R L +A+
Sbjct: 340 YNALMDGY-CLNNQ------MDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAK 392
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+L+ + + P+ T+ + G Q + ++ + K+
Sbjct: 393 SLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKE 432
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 105/256 (41%), Gaps = 13/256 (5%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-C 232
++ +M DRG+ + Y+++++ + G+ + L +EM + + + TF+IL+ C
Sbjct: 254 LLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLC 313
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR----KSEVLM 288
E AM + +G + Y GY D+A VL K +
Sbjct: 314 KEGMVSEARCVFEAMTK--KGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPV 371
Query: 289 MHNKFSRAYDFVITQYAACGNKDDVLRVW-KRYKQNLKVYNRGYICVISSLLKFDGMESA 347
+H +Y+ +I Y D+ + + ++ L Y ++ L + + A
Sbjct: 372 VH-----SYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEA 426
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+F+E S L D+ + L+D C+ G L +A L+ Q EP++ + ++ G
Sbjct: 427 LNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEG 486
Query: 408 YLQNNQSEKGVEAMKK 423
+ E E K
Sbjct: 487 MFIAGKLEVAKELFSK 502
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 159/361 (44%), Gaps = 15/361 (4%)
Query: 56 MLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNF 115
+LS P +S LL++W + + +E ++++ + ALQ WM ++ +
Sbjct: 138 ILSAPSTPLNSTALLLEKWSHQ--LVGLEDFPYLLRELGNRGEWERALQGYEWMVQQVHL 195
Query: 116 VLTPADVA-IRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAE 172
+ +A I + + ++ +E A FN + +VY A+++AY + +A
Sbjct: 196 RSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREAL 255
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
+ Q M+ G I YN++++ + G + K+ + EM+++G++ D+ TF+ L++
Sbjct: 256 KVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAV 315
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
C+ E ++ A M+ RG+ D + T K G + A +++ M
Sbjct: 316 CSRGGLWEDSQRVFAEMQ-RRGIEQDIFTFNTLIDAVCKGGQMELAASIM----TTMRGK 370
Query: 292 KFSR---AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESA 347
S Y +I Y G ++ + ++ K++ +R Y +I K + A
Sbjct: 371 NISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDA 430
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
++ E L D+ N LIDAY ++G A L K + G PNV T+ +
Sbjct: 431 LIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDS 490
Query: 408 Y 408
Y
Sbjct: 491 Y 491
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 119/291 (40%), Gaps = 52/291 (17%)
Query: 133 QGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+GIEQ FN L++A E A IM MR + + + Y++
Sbjct: 335 RGIEQDIFTFN-------------TLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYST 381
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
M++ Y + G +++ SL H+M+E G+ D+ +++ L+
Sbjct: 382 MIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDI--------------------- 420
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD 312
Y K G D AL + E + + Y+ +I Y G D
Sbjct: 421 ---------------YAKLGRFDDALIACKDMERVGLKADVV-TYNALIDAYGKQGKYKD 464
Query: 313 VLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
++ + K V N Y +I S K + +F E++ L D+ + + LID
Sbjct: 465 AACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLID 524
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ C+ GL+ A L+ + G +PN+ T+ + Y + Q++K +EA+K
Sbjct: 525 SCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADK-LEAVK 574
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 124/279 (44%), Gaps = 19/279 (6%)
Query: 142 FNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
F C P Y LLNA+ AK K E + G+ YN ++ + +
Sbjct: 108 FGCEPA----IRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKK 163
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWT 259
++K + M ++G D +++S +++ A A +D + + + ++RGV D T
Sbjct: 164 EFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGK---LDDALELFDEMSERGVAPDVT 220
Query: 260 VYATAASGYVKAGLSDKALA----VLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLR 315
Y G++K A+ +L S V + ++ +I+ + CG DD L+
Sbjct: 221 CYNILIDGFLKEKDHKTAMELWDRLLEDSSVY----PNVKTHNIMISGLSKCGRVDDCLK 276
Query: 316 VWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
+W+R KQN + + Y +I L ++ AE +F E + R D+ N ++ +C
Sbjct: 277 IWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFC 336
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
R G + ++ L ++ N+ ++ ++ G L+N +
Sbjct: 337 RCGKIKESLEL-WRIMEHKNSVNIVSYNILIKGLLENGK 374
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 66/343 (19%), Positives = 140/343 (40%), Gaps = 14/343 (4%)
Query: 78 GRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQ 137
G +++ ++IK K F A WM K+ F + ++ +AK ++
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEG-FKPDVFSYSTVINDLAKAGKLDD 202
Query: 138 AASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKA-EIIMQQMRDRGLVKKTIDYNSMM 194
A F+ + E+ P V Y L++ + K + A E+ + + D + +N M+
Sbjct: 203 ALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMI 262
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGV 254
+ + G + M++ + D YT+S L+ A + + + + ++ +R
Sbjct: 263 SGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELD-ERKA 321
Query: 255 VLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKD 311
+D Y T G+ + G ++L + R +M +K S +Y+ +I G D
Sbjct: 322 SIDVVTYNTMLGGFCRCGKIKESLELWR-----IMEHKNSVNIVSYNILIKGLLENGKID 376
Query: 312 DVLRVWKRYKQNLKVYNRGYICVISSLLKFDG-MESAEKIFEEWESRNLCHDIRIPNHLI 370
+ +W+ ++ + L +G + A + +E ES D+ +I
Sbjct: 377 EATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASII 436
Query: 371 DAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
D C++ L +A L+ + G E N + G +++++
Sbjct: 437 DCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 122/269 (45%), Gaps = 13/269 (4%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+V+ ++++ YA A + E AE ++ + LV I YNS++ Y Q GN + +++L+ +
Sbjct: 202 AVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQ 261
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
MEE+G + ++ +L+ A D E ++A G+ Y + KAG
Sbjct: 262 MEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKA-CGLSPTAATYGCIVKLFTKAG 320
Query: 273 LSDKALAVLRKSEVLMMH-NKFSRAYDFVITQYAACGNKDDVLRVWKR-----YKQNLKV 326
KAL +L + + + NK Y ++ YA G+ +VW+ K ++
Sbjct: 321 NMAKALDILEEMDKHGVSPNKM--IYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVT 378
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
YN ++ + K M+ A + E ++ L I ++D Y + G + KA +
Sbjct: 379 YN----ILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVF 434
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+ + G P V ++ + +G + Q E
Sbjct: 435 DRIKTAGLRPGVVSYNSLLSGLAKARQME 463
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 3/231 (1%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+Y +LN +A + EK +++ GL Y ++ ++ + GN K ++ E
Sbjct: 272 GLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEE 331
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M++ G+ +K +++++ A D K+ M G+ D Y + KAG
Sbjct: 332 MDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDM-VSAGLKPDIVTYNILVHAFCKAG 390
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGY 331
DKAL VL + + Y ++ Y G+ L V+ R K L+ Y
Sbjct: 391 RMDKALGVLENIQANRLLPTI-ETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSY 449
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
++S L K ME+A + +E + + + R L + Y R G + KA
Sbjct: 450 NSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKA 500
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 132/308 (42%), Gaps = 44/308 (14%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
L+ A+++ E+ S+F+ + P+ Y ++ + A + KA I+++M G+
Sbjct: 278 LNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGV 337
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGID 242
+ Y +M+ Y + G++ + +M G+ D T++IL+ A C A +D
Sbjct: 338 SPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGR----MD 393
Query: 243 KIVAMMEADRGVVLDWTV--YATAASGYVKAGLSDKALAV--------LRKSEV------ 286
K + ++E + L T+ Y + GYVK G KAL V LR V
Sbjct: 394 KALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLL 453
Query: 287 -------------LMMHNKFS-------RAYDFVITQYAACGNKDDVLRVWKRYK-QNLK 325
LM+ + R+Y + YA G+ + +++R K +NL
Sbjct: 454 SGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLA 513
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+ Y ++ + K M+ A ++F++ L H+ ++D + R+G L KA L
Sbjct: 514 IDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDL 573
Query: 386 IYKAQLRG 393
+ Q G
Sbjct: 574 LKDMQKHG 581
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 121/306 (39%), Gaps = 12/306 (3%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ YA A + MR + Y S+++ Y + + + + EM
Sbjct: 134 YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML 193
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+GI ++ F ++S A+A + E + +A+ +V VY + Y +AG
Sbjct: 194 SQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAEN-LVPGGIVYNSIVQAYCQAGNM 252
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYIC 333
+ A+L + E Y V+ +A +++ L + R K L Y C
Sbjct: 253 ETVEALLAQMEEEGFQGNLG-LYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGC 311
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
++ K M A I EE + + + I ++D Y R G A + G
Sbjct: 312 IVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG 371
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE--AGTRWKPSKECLAACLGYYKKE 451
+P++ T+ ++ + + + M KAL +LE R P+ E + L Y K
Sbjct: 372 LKPDIVTYNILVHAFCKAGR-------MDKALGVLENIQANRLLPTIETYTSILDGYVKG 424
Query: 452 RDIEGA 457
I+ A
Sbjct: 425 GHIQKA 430
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 80/158 (50%), Gaps = 3/158 (1%)
Query: 130 AKVQGIEQAASYFNCVP-EKLKLPSV-YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
A+ +E+A F + E L + V Y ALL A + + ++A + QQ+ D GL
Sbjct: 492 ARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNR 551
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
I Y +M++ + + G K L+ +M++ G D ++ + AC + D E + + +A+
Sbjct: 552 ITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAV 611
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
M ++ + ++ Y T G++ A D+A++ +++
Sbjct: 612 MR-EKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAK 648
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 128/282 (45%), Gaps = 13/282 (4%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
+AK + + + + VP + +Y L+N Y + A I +QM+ R + I
Sbjct: 350 VAKAKQVFEMLVHTGLVPTTV----IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHI 405
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMM 248
YN+++N + K + L+ EME+ G+D TF+ L+ A A E +++ M
Sbjct: 406 TYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM 465
Query: 249 EADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYA 305
+ +G+ D + + + K G +A+A+L M++ ++ Y+ +I Y
Sbjct: 466 Q-QKGIKSDVISFGSVVKAFCKNGKIPEAVAILDD----MIYKDVAPNAQVYNSIIDAYI 520
Query: 306 ACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
G+ + L + ++ K + + Y ++ L + ++ AE++ ++ L D+
Sbjct: 521 ESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 580
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
N +I A C +G KA L+ + G P +RT + + +
Sbjct: 581 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVS 622
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 25/255 (9%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-C 232
+ +M D G+ I YN+M++ + + G+ + L +M G + T+++LLS C
Sbjct: 216 VFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLC 275
Query: 233 AAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH 290
+D+ A+M+ A ++ D Y+ G + G S L++ +S +
Sbjct: 276 RTGR----MDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAES---LKK 328
Query: 291 NKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK---------VYNRGYICVISSLLKF 341
AY I C KD + K+ + L +YN +I+ +
Sbjct: 329 GVMLGAYTCSILLNGLC--KDGKVAKAKQVFEMLVHTGLVPTTVIYNT----LINGYCQV 382
Query: 342 DGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+ A IFE+ +SR++ D N LI+ C+ ++ KAE L+ + + G +P+V T+
Sbjct: 383 RDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETF 442
Query: 402 YLMATGYLQNNQSEK 416
+ Y Q EK
Sbjct: 443 NTLIDAYGTAGQLEK 457
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 114/269 (42%), Gaps = 9/269 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y +++ + E + QM G + YN +++ +TG + +LM EM
Sbjct: 231 TYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEM 290
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ D +T+SIL + + + + A +GV+L + +G K G
Sbjct: 291 ASHSMLPDGFTYSILFDGLTRTGESQTMLSLFA-ESLKKGVMLGAYTCSILLNGLCKDGK 349
Query: 274 SDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNR 329
KA V +++H + Y+ +I Y + ++++ K ++++ +
Sbjct: 350 VAKAKQVFE----MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHI 405
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +I+ L K + + AE + E E + + N LIDAY G L K T++
Sbjct: 406 TYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM 465
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
Q +G + +V ++ + + +N + + V
Sbjct: 466 QQKGIKSDVISFGSVVKAFCKNGKIPEAV 494
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y LL + ++AE ++ +R++GL + YN++++ G+ K L+ EM
Sbjct: 546 TYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM 605
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ GI T L+SA A+A ++ + M + V ++Y YV+
Sbjct: 606 NKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQM-LHKNVEPSSSIYGIMVDAYVRCE- 663
Query: 274 SDKALAVLRK 283
+D +A L+K
Sbjct: 664 NDSKVASLKK 673
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 129/291 (44%), Gaps = 11/291 (3%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I ++ + K +E+ ++ + V EK P + Y L++AY+ E+A +M M +
Sbjct: 230 IMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSK 289
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILLSACAAASDGEG 240
G YN+++N + G Y++ + EM G+ D T+ S+L+ AC D
Sbjct: 290 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG-DAVE 348
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR--KSEVLMMHNKFSRAYD 298
+ I + M + R VV D +++ S + ++G DKAL K L+ N Y
Sbjct: 349 TENIFSDMRS-RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI---YT 404
Query: 299 FVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
+I Y G + + + +Q + Y ++ L K + A+K+F E R
Sbjct: 405 ILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 464
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
L D LID +C+ G L A L K + + + +V T+ + G+
Sbjct: 465 GLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGF 515
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 129/312 (41%), Gaps = 21/312 (6%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+ L + +++A YFN V E +P +Y L+ Y +A + +M +G
Sbjct: 372 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGC 431
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ YN++++ + + D L +EM E+G+ D YT +IL+ + + +
Sbjct: 432 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAME 491
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV---LRKSEVLMMHNKFSRAYDFV 300
+ M+ R + LD Y T G+ K G D A + + E+L FS +
Sbjct: 492 LFKKMKEKR-IKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFS----IL 546
Query: 301 ITQYAACGNKDDVLRVW-----KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
+ + G+ + RVW K K + + N +I + E E+
Sbjct: 547 VNALCSKGHLSEAFRVWDEMISKSIKPTVMICNS----MIKGYCRSGNASDGEIFLEKMI 602
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR--GTEPNVRTWYLMATGYLQNNQ 413
S D N LI + + + KA L+ K + + G P+V T+ + G+ + NQ
Sbjct: 603 SEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQ 662
Query: 414 SEKGVEAMKKAL 425
++ ++K +
Sbjct: 663 MKEAEAVLRKMI 674
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 117/260 (45%), Gaps = 10/260 (3%)
Query: 163 ACAKS-AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCD 221
AC K A + E I MR R +V + ++SMM+++ ++GN K + ++E G+ D
Sbjct: 340 ACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 399
Query: 222 KYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV 280
++IL+ C E ++ M++ +G +D Y T G K + +A +
Sbjct: 400 NVIYTILIQGYCRKGMISEAMNLRNEMLQ--QGCAMDVVTYNTILHGLCKRKMLGEADKL 457
Query: 281 LRKSEVLMMHNKFSRAYDFVITQYAAC--GNKDDVLRVWKRYKQN-LKVYNRGYICVISS 337
+ + F +Y I C GN + + ++K+ K+ +K+ Y ++
Sbjct: 458 FNE---MTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDG 514
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
K +++A++I+ + S+ + + L++A C +G L +A + + + +P
Sbjct: 515 FGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPT 574
Query: 398 VRTWYLMATGYLQNNQSEKG 417
V M GY ++ + G
Sbjct: 575 VMICNSMIKGYCRSGNASDG 594
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 113/270 (41%), Gaps = 9/270 (3%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
++NA EK + +++++G+ + YN++++ Y G ++ LMH M KG
Sbjct: 231 MVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKG 290
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG---LS 274
YT++ +++ E ++ A M G+ D T Y + K G +
Sbjct: 291 FSPGVYTYNTVINGLCKHGKYERAKEVFAEM-LRSGLSPDSTTYRSLLMEACKKGDAVET 349
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYIC 333
+ + +R +V+ FS +++ + GN D L + K+ L N Y
Sbjct: 350 ENIFSDMRSRDVVPDLVCFSS----MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 405
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+I + + A + E + D+ N ++ C+R +L +A+ L + RG
Sbjct: 406 LIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERG 465
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
P+ T ++ G+ + + +E KK
Sbjct: 466 LFPDSYTLTILIDGHCKLGNLQNAMELFKK 495
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 115/271 (42%), Gaps = 18/271 (6%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +L+ K +A+ + +M +RGL + +++ + + GN + L +M+
Sbjct: 438 YNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMK 497
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR----GVVLDWTVYATAASGYVK 270
EK I D T++ LL D + +I A M + + V A + G++
Sbjct: 498 EKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLS 557
Query: 271 AGLS--DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD-VLRVWKRYKQNLKVY 327
D+ ++ K V++ ++ +I Y GN D + + K +
Sbjct: 558 EAFRVWDEMISKSIKPTVMICNS--------MIKGYCRSGNASDGEIFLEKMISEGFVPD 609
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESR--NLCHDIRIPNHLIDAYCRRGLLHKAETL 385
Y +I +K + M A + ++ E + L D+ N ++ +CR + +AE +
Sbjct: 610 CISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAV 669
Query: 386 IYKAQLRGTEPNVRTWYLMATGYL-QNNQSE 415
+ K RG P+ T+ + G++ Q+N +E
Sbjct: 670 LRKMIERGVNPDRSTYTSLINGFVSQDNLTE 700
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 80/174 (45%), Gaps = 25/174 (14%)
Query: 269 VKAG-LSDKALAVLRKSEVLMMHNKFSRA--YDFVITQYAACGNKDDVLRVWKR------ 319
V++G LSD VLR ++ + SR + +++ Y+ CG+ D V + R
Sbjct: 114 VRSGRLSDAQSCVLR----MIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQAR 169
Query: 320 -----YKQNLKVYNRGYI-------CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
Y+ + ++GY +I SL++ +E A +I++E + ++ N
Sbjct: 170 KLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLN 229
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
+++A C+ G + K T + + Q +G P++ T+ + + Y E+ E M
Sbjct: 230 IMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELM 283
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%)
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
++++L K ME E + + + DI N LI AY +GL+ +A L++ +G
Sbjct: 231 MVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKG 290
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
P V T+ + G ++ + E+ E + L
Sbjct: 291 FSPGVYTYNTVINGLCKHGKYERAKEVFAEML 322
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 4/217 (1%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
L ++ E G D L I+I +A+++ M K+ L LD
Sbjct: 457 LFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKM-KEKRIKLDVVTYNTLLDGF 515
Query: 130 AKVQGIEQAASYFNCVPEK--LKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
KV I+ A + + K L P + L+NA +A + +M + +
Sbjct: 516 GKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTV 575
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
+ NSM+ Y ++GN + + +M +G D +++ L+ + +V
Sbjct: 576 MICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKK 635
Query: 248 MEADR-GVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
ME + G+V D Y + G+ + +A AVLRK
Sbjct: 636 MEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRK 672
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 113/252 (44%), Gaps = 36/252 (14%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S ++A+++A E+AE I ++M++ GL + +N+++ Y + G+ K+ +S++ E
Sbjct: 317 STFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISE 376
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
ME+ G+ D++T+ +L+ A A E ++ MEA R V + +++ + Y G
Sbjct: 377 MEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEA-RNVQPNTFIFSRILASYRDRG 435
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYI 332
K VLR+ M N N+K Y
Sbjct: 436 EWQKTFEVLRE-----MKN------------------------------SNVKPDRHFYN 460
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I + KF+ ++ A + ++ S + D+ N LID + + G +A L + Q R
Sbjct: 461 VMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQER 520
Query: 393 GTEPNVRTWYLM 404
G P T+ +M
Sbjct: 521 GYLPCPTTYNIM 532
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 107/275 (38%), Gaps = 40/275 (14%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG--NYKKLDSL 209
P Y AL+ A A EKA +M +MR G I+Y+ ++ +T + L L
Sbjct: 209 PLTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKL 268
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
E+E I+ D G++L+ + G+
Sbjct: 269 YEEIESDKIELD-------------------------------GLLLNDIIL-----GFA 292
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYN 328
KAG ++AL L + ++ K S + VI+ G ++ +++ K+ LK
Sbjct: 293 KAGDPNRALYFLSMVQASGLNPKTS-TFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRI 351
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+ + ++ + ++ AE I E E L D L+DAY G A L+ +
Sbjct: 352 KAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQ 411
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ R +PN + + Y + +K E +++
Sbjct: 412 MEARNVQPNTFIFSRILASYRDRGEWQKTFEVLRE 446
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/100 (20%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 136 EQAASYFNCVPEK--LKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
++AA F + E+ L P+ Y ++N+ + ++ +I++ +M+ +GL+ + Y ++
Sbjct: 508 DRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTL 567
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+++Y +G + + M+ G+ ++ L++A A
Sbjct: 568 VDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFA 607
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 138/306 (45%), Gaps = 43/306 (14%)
Query: 136 EQAASYFNCVPEKLKLPSV--YIALLNAYACAKSA---EKAEIIMQQMRDRGLVKKTIDY 190
E+A S FN + E P++ Y A+++A C K ++ +M+ + I +
Sbjct: 285 EEAISVFNSMKEYGLRPNLVTYNAVIDA--CGKGGMEFKQVAKFFDEMQRNCVQPDRITF 342
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA 250
NS++ V + G ++ +L EM + I+ D ++++ LL A + +I+A M A
Sbjct: 343 NSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPA 402
Query: 251 DRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-------------SEVLMMHNKFSRA- 296
R ++ + Y+T G+ KAG D+AL + + + +L ++ K R+
Sbjct: 403 KR-IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSE 461
Query: 297 --------------------YDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVI 335
Y+ ++ Y G D+V +V+ K+ + N Y +I
Sbjct: 462 EALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLI 521
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
K + A ++F E++S L D+ + + LIDA C+ GL+ A +LI + G
Sbjct: 522 DGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGIS 581
Query: 396 PNVRTW 401
PNV T+
Sbjct: 582 PNVVTY 587
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 120/273 (43%), Gaps = 6/273 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHE 212
+ AL++AY + E+A + M++ GL + YN++++ + G +K++ E
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M+ + D+ TF+ LL+ C+ E + M ++R + D Y T K G
Sbjct: 330 MQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEM-SNRRIEQDVFSYNTLLDAICKGG 388
Query: 273 LSDKALAVLRKSEV-LMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRG 330
D A +L + +M N S Y VI +A G D+ L ++ + N+ +
Sbjct: 389 QMDLAFEILAQMPAKRIMPNVVS--YSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVS 446
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y ++S K E A I E S + D+ N L+ Y ++G + + + + +
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMK 506
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
PN+ T+ + GY + ++ +E ++
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEVFRE 539
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 134/286 (46%), Gaps = 12/286 (4%)
Query: 147 EKLKLPSVYIALLNAYACAKSAEKA-EIIMQQMRDR-GLVKKTIDYNSMMNVYYQTGNYK 204
++KL V+ + L++Y + + A ++I+ Q++ G+ T+ YN ++NV + K
Sbjct: 105 HQVKLGVVH-SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYA 262
L+S+ EM +GI D TF+ L+ A A + V M+E + RGV D T +
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQ---VRTAVLMLEEMSSRGVAPDETTFT 220
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVITQYAACGNKDDVLR-VWKRY 320
T G+V+ G + AL V K+ +L M ++ + +I Y G +D L + +
Sbjct: 221 TLMQGFVEEGSIEAALRV--KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEI 278
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
+ Y ++ L + D + A K+ + D+ N +++ C+ G L
Sbjct: 279 ADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE 338
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
+A+ ++ + RG P++ T+ + N+ E+ ++ ++ V
Sbjct: 339 EAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 103/257 (40%), Gaps = 13/257 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY LLN + E + +M RG+ + +N++M + + ++ EM
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 207
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+G+ D+ TF+ L+ E ++ A M + G +GY K G
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM-LEMGCSATKVTVNVLINGYCKLGR 266
Query: 274 SDKALAVLRKSEV------LMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
+ AL +++ + +N F + Q G+ V+ V + + V+
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNG----LCQNDHVGHALKVMDVMVQEGHDPDVF 322
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y V++ L K +E A+ I + R DI N LI A C L +A L
Sbjct: 323 T--YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380
Query: 388 KAQLRGTEPNVRTWYLM 404
+ ++G P+V T+ ++
Sbjct: 381 QVTVKGVSPDVYTFNIL 397
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 105/268 (39%), Gaps = 36/268 (13%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ++N E+A+ I+ QM DRG + +N+++ ++ L ++
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
KG+ D YTF+IL++A D ++ M+ + G D Y T G
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK-NSGCTPDEVTYNTLIDNLCSLGKL 442
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
KAL +L+ E C ++ YN +
Sbjct: 443 GKALDLLKDME------------------STGC-------------PRSTITYN----TI 467
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I L K +E AE++F++ + + + + N LID C+ + A LI + G
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGL 527
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+PN T+ + T Y + +K + ++
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILE 555
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N A + A +++ MR +G+ YN ++ ++ N + SL EM
Sbjct: 569 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628
Query: 215 EKGIDCDKYTFSILLSA-CAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
E G D T+ I+ C E D ++ M+ D+G + +++ + A G + G
Sbjct: 629 EVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV--DKGFIPEFSSFRMLAEGLLNLG 686
Query: 273 LSDKALAVLRKSEVLM 288
+ D +R E++M
Sbjct: 687 MDDY---FIRAIEIIM 699
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 164/371 (44%), Gaps = 19/371 (5%)
Query: 41 TISLRKGSSMYKLYRMLSPMGD--PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKR 98
++S+ KG Y + +++ + P S+ LD + + L + ++ K+F
Sbjct: 64 SVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNK---LSLNDFALVFKEFAGRGD 120
Query: 99 FSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YI 156
+ +L++ +M ++ I + L+ + +++ F+ +P + SV Y
Sbjct: 121 WQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYT 180
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEE 215
AL+NAY E + ++ +M++ + + YN+++N + G +++ L L EM
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRH 240
Query: 216 KGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
+GI D T++ LLSACA G+ + + M D G+V D T Y+ + K +
Sbjct: 241 EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN-DGGIVPDLTTYSHLVETFGKLRRLE 299
Query: 276 KALAVLRKSEVLMMHNKFS----RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
K +L + M + S +Y+ ++ YA G+ + + V+ + + N
Sbjct: 300 KVCDLLGE-----MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANT 354
Query: 332 ICVISSLLKFDG-MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
V+ +L G + ++F E +S N D N LI+ + G + TL +
Sbjct: 355 YSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMV 414
Query: 391 LRGTEPNVRTW 401
EP++ T+
Sbjct: 415 EENIEPDMETY 425
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 127/336 (37%), Gaps = 51/336 (15%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
++ K++ +E+ + LP + Y LL AYA + S ++A + QM+ G
Sbjct: 289 VETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGC 348
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG--I 241
Y+ ++N++ Q+G Y + L EM+ D D T++IL+ GEG
Sbjct: 349 TPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVF-----GEGGYF 403
Query: 242 DKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
++V + + + D Y K GL + A +L ++ A D
Sbjct: 404 KEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKIL----------QYMTANDI 453
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
V + ++ Y VI + + E A F
Sbjct: 454 VPS-------------------------SKAYTGVIEAFGQAALYEEALVAFNTMHEVGS 488
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
I + L+ ++ R GL+ ++E ++ + G N T+ Y Q + E+ V
Sbjct: 489 NPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAV- 547
Query: 420 AMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIE 455
K V +E +R P + L A L Y R ++
Sbjct: 548 ---KTYVDMEK-SRCDPDERTLEAVLSVYSFARLVD 579
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 111/252 (44%), Gaps = 7/252 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y LL+A A ++AE++ + M D G+V Y+ ++ + + +K+ L+ EM
Sbjct: 249 TYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEM 308
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
G D ++++LL A A + + + M+A G + Y+ + + ++G
Sbjct: 309 ASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQA-AGCTPNANTYSVLLNLFGQSGR 367
Query: 274 SD--KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRG 330
D + L + KS + + Y+ +I + G +V+ ++ ++N++
Sbjct: 368 YDDVRQLFLEMKSS---NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMET 424
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I + K E A KI + + ++ + +I+A+ + L +A
Sbjct: 425 YEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMH 484
Query: 391 LRGTEPNVRTWY 402
G+ P++ T++
Sbjct: 485 EVGSNPSIETFH 496
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 128/289 (44%), Gaps = 17/289 (5%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K Q +++A + + +P+ Y ++L+ Y ++ ++A +++MR G+
Sbjct: 241 LCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPD 300
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ YNS+M+ + G + + M ++G++ D T+ LL A + ++
Sbjct: 301 VVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLD 360
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH--NKFSRAYDFVITQY 304
+M G+ D V+ Y K D+A+ V K + H N Y VI
Sbjct: 361 LM-VRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSK---MRQHGLNPNVVTYGAVIGIL 416
Query: 305 AACGNKDDVLRVWKR-----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
G+ DD + +++ N+ VY +I SL FD + AE++ E R +
Sbjct: 417 CKSGSVDDAMLYFEQMIDEGLTPNIIVYTS----LIHSLCIFDKWDKAEELILEMLDRGI 472
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
C + N +I ++C+ G + ++E L G +PNV T+ + GY
Sbjct: 473 CLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGY 521
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 151/351 (43%), Gaps = 24/351 (6%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV--AI 124
M LLD V G D I+I + ++ A+ + +K L P V
Sbjct: 355 MHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLV---FSKMRQHGLNPNVVTYGA 411
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+ ++ K ++ A YF + ++ P+ VY +L+++ +KAE ++ +M DRG
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG 471
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI 241
+ TI +NS+++ + + G + + L M G+ + T+S L+ C A E
Sbjct: 472 ICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEAT 531
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK------SEVLMMHNKFSR 295
+ +M G+ D Y T +GY + D ALA+ ++ S ++ +N +
Sbjct: 532 KLLSSMFSV--GMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 589
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
F + AA K+ + + K Q L YN ++ L K + + A ++F+
Sbjct: 590 GL-FHTRRTAAA--KELYVGITKSGTQLELSTYN----IILHGLCKNNLTDEALRMFQNL 642
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
+L + R N +I A + G +A+ L G PN T+ LMA
Sbjct: 643 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMA 693
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 62/323 (19%), Positives = 134/323 (41%), Gaps = 31/323 (9%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ L+ AYA + ++A ++ +MR GL + Y +++ + ++G+ +M
Sbjct: 373 VFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM 432
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG- 272
++G+ + ++ L+ + + ++++ M DRG+ L+ + + + K G
Sbjct: 433 IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM-LDRGICLNTIFFNSIIHSHCKEGR 491
Query: 273 ------LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLK 325
L D + + K V+ Y +I Y G D+ ++ + +K
Sbjct: 492 VIESEKLFDLMVRIGVKPNVI--------TYSTLIDGYCLAGKMDEATKLLSSMFSVGMK 543
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK---- 381
Y +I+ + M+ A +F+E S + +I N ++ +GL H
Sbjct: 544 PDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL-----QGLFHTRRTA 598
Query: 382 -AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKEC 440
A+ L GT+ + T+ ++ G +NN +++ + M + L L + +
Sbjct: 599 AAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALR-MFQNLCLTDLQLETRTFNIM 657
Query: 441 LAACLGYYKKERDIEGADYFIKL 463
+ A L K R+ E D F+
Sbjct: 658 IGALL---KVGRNDEAKDLFVAF 677
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 134/286 (46%), Gaps = 12/286 (4%)
Query: 147 EKLKLPSVYIALLNAYACAKSAEKA-EIIMQQMRDR-GLVKKTIDYNSMMNVYYQTGNYK 204
++KL V+ + L++Y + + A ++I+ Q++ G+ T+ YN ++NV + K
Sbjct: 105 HQVKLGVVH-SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYA 262
L+S+ EM +GI D TF+ L+ A A + V M+E + RGV D T +
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQ---VRTAVIMLEEMSSRGVAPDETTFT 220
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVITQYAACGNKDDVLR-VWKRY 320
T G+V+ G + AL V K+ +L M ++ + +I Y G +D L + +
Sbjct: 221 TLMQGFVEEGSIEAALRV--KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEI 278
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
+ Y ++ L + D + A K+ + D+ N +++ C+ G L
Sbjct: 279 ADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE 338
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
+A+ ++ + RG P++ T+ + N+ E+ ++ ++ V
Sbjct: 339 EAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 130/311 (41%), Gaps = 12/311 (3%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
L+N Y E A +QQ G I YN+ +N Q + +M M ++G
Sbjct: 257 LINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 316
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
D D +T++I+++ E I+ M DRG + D T + T + ++A
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQM-VDRGCLPDITTFNTLIAALCTGNRLEEA 375
Query: 278 LAVLRKSEVLMMHNKFSRAYDFVITQYAAC--GNKDDVLRVWKRYKQNLKVYNR-GYICV 334
L + R+ V Y F I A C G+ LR+++ K + + Y +
Sbjct: 376 LDLARQVTV---KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I +L + A + ++ ES N +ID C++ + +AE + + L+G
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDI 454
N T+ + G ++ + + E + + ++ G +P+ + L +Y K+ DI
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFELINQ---MISEG--LQPNNITYNSILTHYCKQGDI 547
Query: 455 EGADYFIKLLT 465
+ A ++ +T
Sbjct: 548 KKAADILETMT 558
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 103/257 (40%), Gaps = 13/257 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY LLN + E + +M RG+ + +N++M + + ++ EM
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEM 207
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+G+ D+ TF+ L+ E ++ A M + G +GY K G
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM-LEMGCSATKVTVNVLINGYCKLGR 266
Query: 274 SDKALAVLRKSEV------LMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
+ AL +++ + +N F + Q G+ V+ V + + V+
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNG----LCQNDHVGHALKVMDVMVQEGHDPDVF 322
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y V++ L K +E A+ I + R DI N LI A C L +A L
Sbjct: 323 T--YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380
Query: 388 KAQLRGTEPNVRTWYLM 404
+ ++G P+V T+ ++
Sbjct: 381 QVTVKGVSPDVYTFNIL 397
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 105/268 (39%), Gaps = 36/268 (13%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ++N E+A+ I+ QM DRG + +N+++ ++ L ++
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
KG+ D YTF+IL++A D ++ M+ + G D Y T G
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK-NSGCTPDEVTYNTLIDNLCSLGKL 442
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
KAL +L+ E C ++ YN +
Sbjct: 443 GKALDLLKDME------------------STGC-------------PRSTITYN----TI 467
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I L K +E AE++F++ + + + + N LID C+ + A LI + G
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 527
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+PN T+ + T Y + +K + ++
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILE 555
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N A + A +++ MR +G+ YN ++ ++ N + SL EM
Sbjct: 569 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628
Query: 215 EKGIDCDKYTFSILLSA-CAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
E G D T+ I+ C E D ++ M+ D+G + +++ + A G + G
Sbjct: 629 EVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV--DKGFIPEFSSFRMLAEGLLNLG 686
Query: 273 LSDKALAVLRKSEVLM 288
+ D +R E++M
Sbjct: 687 MDDY---FIRAIEIIM 699
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 134/286 (46%), Gaps = 12/286 (4%)
Query: 147 EKLKLPSVYIALLNAYACAKSAEKA-EIIMQQMRDR-GLVKKTIDYNSMMNVYYQTGNYK 204
++KL V+ + L++Y + + A ++I+ Q++ G+ T+ YN ++NV + K
Sbjct: 105 HQVKLGVVH-SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYA 262
L+S+ EM +GI D TF+ L+ A A + V M+E + RGV D T +
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQ---VRTAVLMLEEMSSRGVAPDETTFT 220
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVITQYAACGNKDDVLR-VWKRY 320
T G+V+ G + AL V K+ +L M ++ + +I Y G +D L + +
Sbjct: 221 TLMQGFVEEGSIEAALRV--KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEI 278
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
+ Y ++ L + D + A K+ + D+ N +++ C+ G L
Sbjct: 279 ADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE 338
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
+A+ ++ + RG P++ T+ + N+ E+ ++ ++ V
Sbjct: 339 EAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 130/311 (41%), Gaps = 12/311 (3%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
L+N Y E A +QQ G I YN+ +N Q + +M M ++G
Sbjct: 257 LINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 316
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
D D +T++I+++ E I+ M DRG + D T + T + ++A
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQM-VDRGCLPDITTFNTLIAALCTGNRLEEA 375
Query: 278 LAVLRKSEVLMMHNKFSRAYDFVITQYAAC--GNKDDVLRVWKRYKQNLKVYNR-GYICV 334
L + R+ V Y F I A C G+ LR+++ K + + Y +
Sbjct: 376 LDLARQVTV---KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I +L + A + ++ ES N +ID C++ + +AE + + L+G
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDI 454
N T+ + G ++ + + E + + ++ G +P+ + L +Y K+ DI
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFELINQ---MISEG--LQPNNITYNSILTHYCKQGDI 547
Query: 455 EGADYFIKLLT 465
+ A ++ +T
Sbjct: 548 KKAADILETMT 558
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 103/257 (40%), Gaps = 13/257 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY LLN + E + +M RG+ + +N++M + + ++ EM
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 207
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+G+ D+ TF+ L+ E ++ A M + G +GY K G
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM-LEMGCSATKVTVNVLINGYCKLGR 266
Query: 274 SDKALAVLRKSEV------LMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
+ AL +++ + +N F + Q G+ V+ V + + V+
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNG----LCQNDHVGHALKVMDVMVQEGHDPDVF 322
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y V++ L K +E A+ I + R DI N LI A C L +A L
Sbjct: 323 T--YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380
Query: 388 KAQLRGTEPNVRTWYLM 404
+ ++G P+V T+ ++
Sbjct: 381 QVTVKGVSPDVYTFNIL 397
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 105/268 (39%), Gaps = 36/268 (13%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ++N E+A+ I+ QM DRG + +N+++ ++ L ++
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
KG+ D YTF+IL++A D ++ M+ + G D Y T G
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK-NSGCTPDEVTYNTLIDNLCSLGKL 442
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
KAL +L+ E C ++ YN +
Sbjct: 443 GKALDLLKDME------------------STGC-------------PRSTITYN----TI 467
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I L K +E AE++F++ + + + + N LID C+ + A LI + G
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 527
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+PN T+ + T Y + +K + ++
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILE 555
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N A + A +++ MR +G+ YN ++ ++ N + SL EM
Sbjct: 569 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628
Query: 215 EKGIDCDKYTFSILLSA-CAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
E G D T+ I+ C E D ++ M+ D+G + +++ + A G + G
Sbjct: 629 EVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV--DKGFIPEFSSFRMLAEGLLNLG 686
Query: 273 LSDKALAVLRKSEVLM 288
+ D +R E++M
Sbjct: 687 MDDY---FIRAIEIIM 699
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 118/271 (43%), Gaps = 3/271 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+N ++ + ++M++ G+ YN +MN + G K + EM
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E+G+ C+ T++ L+ +K+V M++D G+ + Y T G+ G
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD-GINPNLITYNTLIDGFCGVGK 353
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYI 332
KAL++ R + + Y+ +++ + G+ ++ K ++ +K Y
Sbjct: 354 LGKALSLCRDLKSRGLSPSLV-TYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYT 412
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I + + D ME A ++ E L D+ + LI +C +G +++A L +
Sbjct: 413 ILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
EPN + M GY + S + ++ +K+
Sbjct: 473 NCEPNEVIYNTMILGYCKEGSSYRALKLLKE 503
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 128/281 (45%), Gaps = 23/281 (8%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y ++N+Y ++S + +M D G V + +N ++ + ++ + S +E
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 214 EEKGIDCDKYTFSILLSACAAASDGE-GIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ K + D Y+F IL+ C A + E D ++ + E G + +Y T G K G
Sbjct: 156 KSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEF--GFSPNVVIYTTLIDGCCKKG 212
Query: 273 LSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKV 326
+KA + + ++ ++ N+ R Y +I G K ++++ ++ NL
Sbjct: 213 EIEKAKDLFFEMGKLGLVANE--RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT 270
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
YN CV++ L K + A ++F+E R + +I N LI CR L++A ++
Sbjct: 271 YN----CVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVV 326
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVL 427
+ + G PN+ T+ + G+ GV + KAL L
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFC-------GVGKLGKALSL 360
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 105/237 (44%), Gaps = 3/237 (1%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+A ++ QM+ G+ I YN++++ + G K SL +++ +G+ T++IL+
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
S D G K+V ME +RG+ Y + ++ +KA+ + E L +
Sbjct: 381 SGFCRKGDTSGAAKMVKEME-ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL 439
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAE 348
Y +I + G ++ R++K ++N + Y +I K A
Sbjct: 440 VPDV-HTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
K+ +E E + L ++ ++I+ C+ +AE L+ K G +P+ L++
Sbjct: 499 KLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLIS 555
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 9/273 (3%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ L+N +A ++ +M + G I N+++N +G + L+ +M
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220
Query: 215 EKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E G + T+ +L+ C + ++ + M E R + LD Y+ G K G
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE--RNIKLDAVKYSIIIDGLCKHGS 278
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD---VLRVWKRYKQNLKVYNRG 330
D A + + E+ + Y+ +I + G DD +LR + K N V
Sbjct: 279 LDNAFNLFNEMEMKGITTNII-TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT-- 335
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
+ +I S +K + AE++ +E R + D LID +C+ L KA ++
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+G +PN+RT+ ++ GY + N+ + G+E +K
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 128/294 (43%), Gaps = 29/294 (9%)
Query: 142 FNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
+ C P + Y +LN + A ++++M +R + + Y+ +++ + G
Sbjct: 222 YGCQPNAV----TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 277
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTV 260
+ +L +EME KGI + T++IL+ C A +G + M++ R + +
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK--RKINPNVVT 335
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVL---MMHNKFSR---AYDFVITQYAACGNKDDV- 313
++ +VK G LR++E L M+H + Y +I + + D
Sbjct: 336 FSVLIDSFVKEG-------KLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 314 ----LRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
L V K N++ +N +I+ K + ++ ++F + R + D N L
Sbjct: 389 QMVDLMVSKGCDPNIRTFN----ILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
I +C G L+ A+ L + R PN+ T+ ++ G N +SEK +E +K
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 109/259 (42%), Gaps = 40/259 (15%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V + L++++ +AE + ++M RG+ TI Y S+++ + + + K + +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 210 MHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ M KG D + TF+IL++ C A +G++ M + RGVV D Y T G+
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM--SLRGVVADTVTYNTLIQGF 448
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
+ G + A + ++ V ++ N+ Y
Sbjct: 449 CELGKLNVAKELFQE-------------------------------MVSRKVPPNIVTYK 477
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
++ L E A +IFE+ E + DI I N +I C + A L
Sbjct: 478 ----ILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 533
Query: 389 AQLRGTEPNVRTWYLMATG 407
L+G +P V+T+ +M G
Sbjct: 534 LPLKGVKPGVKTYNIMIGG 552
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 140/340 (41%), Gaps = 17/340 (5%)
Query: 151 LPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
LP+V + L +A A K + + +QM +G+ + M+N + + S
Sbjct: 85 LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFS 144
Query: 209 LMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
M ++ + G + + TFS L++ C E ++ + M+E G D T +G
Sbjct: 145 AMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM--GHKPDLITINTLVNG 202
Query: 268 YVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLK 325
+G +A+ ++ K E N + Y V+ G + + ++ ++ N+K
Sbjct: 203 LCLSGKEAEAMLLIDKMVEYGCQPNAVT--YGPVLNVMCKSGQTALAMELLRKMEERNIK 260
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+ Y +I L K +++A +F E E + + +I N LI +C G L
Sbjct: 261 LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKL 320
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACL 445
+ R PNV T+ ++ +++ + + E K+ ++ G P + +
Sbjct: 321 LRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE---MIHRGI--APDTITYTSLI 375
Query: 446 GYYKKERDIEGADYFIKLLTGKEIISADLQDRLLNNIRNG 485
+ KE ++ A+ + L+ K D R N + NG
Sbjct: 376 DGFCKENHLDKANQMVDLMVSK---GCDPNIRTFNILING 412
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 135 IEQAASYFN-CVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYN 191
+ +A+ F+ CV ++ P+ Y AL+N + E AE+++ M+ RG+ I +N
Sbjct: 269 VRRASEVFDECVGHGVE-PNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFN 327
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
+M++ Y + G +K + ME+ GI+ D YT++ L + E K++ +M A+
Sbjct: 328 TMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIM-AE 386
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKD 311
+GV ++ Y T S + K G +A + R M K SR V+T
Sbjct: 387 KGVAPNYVSYTTLISIHAKEGDMVEARRLFRD-----MEGKGSRPS--VVT--------- 430
Query: 312 DVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
Y +I +K + AE+ +E E + L DI L+
Sbjct: 431 -------------------YNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVH 471
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+C G + A L + + RGT+PNV + + +G + +SE+ +
Sbjct: 472 GHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQ 519
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 132/310 (42%), Gaps = 41/310 (13%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
+++ + + S + A ++ ++ G+ YNS+++ Y + N + L+ EME +G
Sbjct: 154 VVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRG 213
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
++ T++IL+ + A D ++ + M+ + V D Y+ + Y + G
Sbjct: 214 VEPTVGTYTILVDGLSRAGDISKVEAVYDEMKR-KNVAGDVYFYSAVINAYCRGG----- 267
Query: 278 LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISS 337
V R SEV +D + ++ R Y +I+
Sbjct: 268 -NVRRASEV----------FDECV-------------------GHGVEPNERTYGALING 297
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
K +E+AE + + + R + H+ + N +ID YCR G++ KA + + G E +
Sbjct: 298 FCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELD 357
Query: 398 VRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGA 457
+ T+ +A G + N+ E +A K ++ E G P+ + + KE D+ A
Sbjct: 358 IYTYNTLACGLCRVNRME---DAKKLLHIMAEKGV--APNYVSYTTLISIHAKEGDMVEA 412
Query: 458 DYFIKLLTGK 467
+ + GK
Sbjct: 413 RRLFRDMEGK 422
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 128/289 (44%), Gaps = 17/289 (5%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K Q +++A + + +P+ Y ++L+ Y ++ ++A +++MR G+
Sbjct: 241 LCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPD 300
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ YNS+M+ + G + + M ++G++ D T+ LL A + ++
Sbjct: 301 VVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLD 360
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH--NKFSRAYDFVITQY 304
+M G+ D V+ Y K D+A+ V K + H N Y VI
Sbjct: 361 LM-VRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSK---MRQHGLNPNVVTYGAVIGIL 416
Query: 305 AACGNKDDVLRVWKR-----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
G+ DD + +++ N+ VY +I SL FD + AE++ E R +
Sbjct: 417 CKSGSVDDAMLYFEQMIDEGLTPNIIVYTS----LIHSLCIFDKWDKAEELILEMLDRGI 472
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
C + N +I ++C+ G + ++E L G +PNV T+ + GY
Sbjct: 473 CLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGY 521
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 155/356 (43%), Gaps = 24/356 (6%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV--AI 124
M LLD V G D I+I + ++ A+ + +K L P V
Sbjct: 355 MHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLV---FSKMRQHGLNPNVVTYGA 411
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+ ++ K ++ A YF + ++ P+ VY +L+++ +KAE ++ +M DRG
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG 471
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI 241
+ TI +NS+++ + + G + + L M G+ + T+S L+ C A E
Sbjct: 472 ICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEAT 531
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK------SEVLMMHNKFSR 295
+ +M G+ D Y T +GY + D ALA+ ++ S ++ +N +
Sbjct: 532 KLLSSMFSV--GMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 589
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
F + AA K+ + + K Q L YN ++ L K + + A ++F+
Sbjct: 590 GL-FHTRRTAAA--KELYVGITKSGTQLELSTYN----IILHGLCKNNLTDEALRMFQNL 642
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+L + R N +I A + G +A+ L G P+VRT+ LMA ++
Sbjct: 643 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIE 698
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 63/323 (19%), Positives = 134/323 (41%), Gaps = 31/323 (9%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ L+ AYA + ++A ++ +MR GL + Y +++ + ++G+ +M
Sbjct: 373 VFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM 432
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG- 272
++G+ + ++ L+ + + ++++ M DRG+ L+ + + + K G
Sbjct: 433 IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM-LDRGICLNTIFFNSIIHSHCKEGR 491
Query: 273 ------LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLK 325
L D + + K V+ Y +I Y G D+ ++ + +K
Sbjct: 492 VIESEKLFDLMVRIGVKPNVI--------TYSTLIDGYCLAGKMDEATKLLSSMFSVGMK 543
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK---- 381
Y +I+ + M+ A +F+E S + +I N ++ +GL H
Sbjct: 544 PDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL-----QGLFHTRRTA 598
Query: 382 -AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKEC 440
A+ L GT+ + T+ ++ G +NN +++ + M + L L + +
Sbjct: 599 AAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALR-MFQNLCLTDLQLETRTFNIM 657
Query: 441 LAACLGYYKKERDIEGADYFIKL 463
+ A L K R+ E D F L
Sbjct: 658 IGALL---KVGRNDEAKDLFAAL 677
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 164/371 (44%), Gaps = 19/371 (5%)
Query: 41 TISLRKGSSMYKLYRMLSPMGD--PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKR 98
++S+ KG Y + +++ + P S+ LD + + L + ++ K+F
Sbjct: 64 SVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNK---LSLNDFALVFKEFAGRGD 120
Query: 99 FSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YI 156
+ +L++ +M ++ I + L+ + +++ F+ +P + SV Y
Sbjct: 121 WQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYT 180
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEE 215
AL+NAY E + ++ +M++ + + YN+++N + G +++ L L EM
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGLFAEMRH 240
Query: 216 KGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
+GI D T++ LLSACA G+ + + M D G+V D T Y+ + K +
Sbjct: 241 EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN-DGGIVPDLTTYSHLVETFGKLRRLE 299
Query: 276 KALAVLRKSEVLMMHNKFS----RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
K +L + M + S +Y+ ++ YA G+ + + V+ + + N
Sbjct: 300 KVSDLLSE-----MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANT 354
Query: 332 ICVISSLLKFDG-MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
V+ +L G + ++F E +S N D N LI+ + G + TL +
Sbjct: 355 YSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMV 414
Query: 391 LRGTEPNVRTW 401
EP++ T+
Sbjct: 415 EENIEPDMETY 425
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 129/336 (38%), Gaps = 51/336 (15%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
++ K++ +E+ + + + LP + Y LL AYA + S ++A + QM+ G
Sbjct: 289 VETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGC 348
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG--I 241
Y+ ++N++ Q+G Y + L EM+ D D T++IL+ GEG
Sbjct: 349 TPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVF-----GEGGYF 403
Query: 242 DKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
++V + + + D Y K GL + A +L ++ A D
Sbjct: 404 KEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKIL----------QYMTANDI 453
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
V + ++ Y VI + + E A F
Sbjct: 454 VPS-------------------------SKAYTGVIEAFGQAALYEEALVAFNTMHEVGS 488
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
I + L+ ++ R GL+ ++E ++ + G N T+ Y Q + E+ V
Sbjct: 489 NPSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAV- 547
Query: 420 AMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIE 455
K V +E +R P + L A L Y R ++
Sbjct: 548 ---KTYVDMEK-SRCDPDERTLEAVLSVYSFARLVD 579
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 111/252 (44%), Gaps = 7/252 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y LL+A A ++AE++ + M D G+V Y+ ++ + + +K+ L+ EM
Sbjct: 249 TYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEM 308
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
G D ++++LL A A + + + M+A G + Y+ + + ++G
Sbjct: 309 ASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQA-AGCTPNANTYSVLLNLFGQSGR 367
Query: 274 SD--KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRG 330
D + L + KS + + Y+ +I + G +V+ ++ ++N++
Sbjct: 368 YDDVRQLFLEMKSS---NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMET 424
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I + K E A KI + + ++ + +I+A+ + L +A
Sbjct: 425 YEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMH 484
Query: 391 LRGTEPNVRTWY 402
G+ P++ T++
Sbjct: 485 EVGSNPSIETYH 496
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 126/284 (44%), Gaps = 27/284 (9%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y +++ A+ ++AE + QQM D G+ YN +++ Y G +K++ +
Sbjct: 205 PNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQM 264
Query: 210 MHEMEEKGIDCDKYTFSILLS-ACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ +M +G+ D YT+ LL+ CA + +D +V + G+ D ++ S Y
Sbjct: 265 LEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMV-----ENGLSPDHHIFNIFFSAY 319
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKR-----Y 320
K G+ DKA+ + K M + S Y +I G DD + +
Sbjct: 320 AKCGMIDKAMDIFNK----MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGV 375
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
N+ V+N ++ L D E AE++ E + +C + N LI C G +
Sbjct: 376 TPNIVVFNS----LVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVM 431
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYL---QNNQSEKGVEAM 421
+ LI + G P+ ++ + +GY + +++EK + M
Sbjct: 432 EGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGM 475
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTV--Y 261
+ +D L+ M E G D ++SILL + E +++ MM D G V Y
Sbjct: 151 EAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTY 210
Query: 262 ATAASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWK 318
T G KA L D+A V ++ M+ N + Y+ +I Y + G +V+++ +
Sbjct: 211 TTVIDGLCKAQLFDRAEGVFQQ----MIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLE 266
Query: 319 RYK-QNLK--VYNRG----YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
+ + LK Y G Y+C +S + F + L D I N
Sbjct: 267 KMSARGLKPDCYTYGSLLNYLCALSEMHSF---------LDLMVENGLSPDHHIFNIFFS 317
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
AY + G++ KA + K + G PNV +
Sbjct: 318 AYAKCGMIDKAMDIFNKMRQHGLSPNVVNY 347
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y LL+ Y A + A + ++M +G+ + YN++++ +QT + + L M
Sbjct: 487 YNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMI 546
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAG 272
G CD YT++I+L+ ++ +D+ M ++ +G+ L+ + +K G
Sbjct: 547 NSGTKCDIYTYNIILNGLCKSN---CVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGG 603
Query: 273 LSDKAL 278
+ A+
Sbjct: 604 RKEDAM 609
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 127/336 (37%), Gaps = 77/336 (22%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG------------ 201
++ +AYA +KA I +MR GL ++Y ++++ + G
Sbjct: 311 IFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM 370
Query: 202 -----------------------NYKKLDSLMHEMEEKGIDCDKYTF--SILLSACAAAS 236
+++ + L++EM ++GI C F +++ + C
Sbjct: 371 INEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGI-CPNAVFFNTLICNLCNVGR 429
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA 296
EG +++ +ME GV D Y SGY AG +D+A V V + +
Sbjct: 430 VMEG-RRLIDLME-HVGVRPDAFSYTPLISGYCLAGRTDEAEKVF-DGMVSIGLSPTEVT 486
Query: 297 YDFVITQYAACGNKDDVLRVW-------------------------KRYKQNLKVY---- 327
Y+ ++ Y + DD ++ KR+ + ++Y
Sbjct: 487 YNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMI 546
Query: 328 NRGYIC-------VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
N G C +++ L K + ++ A K+F+ S+ L +I +I A + G
Sbjct: 547 NSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKE 606
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
A L G PNV T+ L+A ++ E+
Sbjct: 607 DAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEE 642
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 105/281 (37%), Gaps = 7/281 (2%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ Y A ++AE + M GL + YN++++ Y L EM
Sbjct: 452 YTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREML 511
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
KG+ T++ +L ++ M + G D Y +G K+
Sbjct: 512 RKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM-INSGTKCDIYTYNIILNGLCKSNCV 570
Query: 275 DKALAVLRK--SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGY 331
D+A + + S+ L ++ + +I G K+D + ++ N V N Y
Sbjct: 571 DEAFKMFQSLCSKGLQLN---IITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTY 627
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
V +L++ +E + +F E + ++ N L+ RG + +A + K
Sbjct: 628 RLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDE 687
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGT 432
R T L+ + + + +K L EA +
Sbjct: 688 RNFSVEASTTSLLISIFTSDEYQHHAKSLPEKYHFLNEANS 728
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 129/297 (43%), Gaps = 41/297 (13%)
Query: 133 QG-IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
QG + +A + FN + +K +P V Y ++++A A++ +KAE +++QM D+G+ +
Sbjct: 245 QGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVT 304
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
YN++++ Y +G++K+ + +M KG+ D TFS +S+ + ++I M
Sbjct: 305 YNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMT 364
Query: 250 ADRGVVLDWTVYATAASGYVKAG-LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG 308
+G + D Y+ GY G +D M+N F D I C
Sbjct: 365 T-KGHMPDIVSYSILLHGYATEGRFAD-------------MNNLFHSMADKGIVSNCHCI 410
Query: 309 NKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
N +IS+ K M+ A +F E + + + ++ +
Sbjct: 411 N-----------------------ILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYST 447
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
LI A+CR G L A + G EPN ++ + G+ + K E + + +
Sbjct: 448 LISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMM 504
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 100/244 (40%), Gaps = 12/244 (4%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y L++A+ A QM G+ T Y+S+++ + G+ K
Sbjct: 440 PNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEF 499
Query: 210 MHEMEEKGIDCDKYTF--SILLSACAAAS--DGEGIDKIVAMMEADRGVVLDWTVYATAA 265
+ EM KG+ F SI+ S C D + + +V + DR ++ + +
Sbjct: 500 ISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHI-GDRPTIV---TFNSLI 555
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNL 324
GY G +KA VL + + + +++ Y G DD L +++ + +
Sbjct: 556 DGYCLVGKMEKAFGVLDAMVSVGIEPDVV-TNNTLVSGYCKSGKIDDGLILFREMLHKKV 614
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
K Y V+ LL+ +A+K+F E DI L+ CR L +A T
Sbjct: 615 KPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAIT 674
Query: 385 LIYK 388
L +K
Sbjct: 675 LFHK 678
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 127/323 (39%), Gaps = 17/323 (5%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID-YNSMMNVYYQTGNYKKLDSLMH 211
+VY +L++ + KA+ + +M +GL + I ++S+++ G + +
Sbjct: 478 AVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFN 537
Query: 212 EMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
+ G TF+ L+ C + + AM+ G+ D T SGY K
Sbjct: 538 LVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSV--GIEPDVVTNNTLVSGYCK 595
Query: 271 AGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKV 326
+G D L + R+ M+H K + Y+ V+ G +++ V
Sbjct: 596 SGKIDDGLILFRE----MLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAV 651
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
Y ++ L + D + A +F + + + DI I N +I+A + +A L
Sbjct: 652 DIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLF 711
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLG 446
G PNV T+ +M ++N E VE +E + PS L +
Sbjct: 712 AAISTSGLVPNVSTYGVM----IRNLLKEGSVEEADTMFSSMEK-SGCAPSSRLLNDIIR 766
Query: 447 YYKKERDIEGADYFIKLLTGKEI 469
++ DI A Y++ + G I
Sbjct: 767 MLLQKGDIVKAGYYMSKVDGTII 789
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 22/197 (11%)
Query: 224 TFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA-ASGYVKAGLSDKALAVL- 281
T+ IL+ C A + VA + R + T+ AT A +D+A+ VL
Sbjct: 126 TYGILMDCCCRARRPDLGPAFVARLL--RAGLKTGTIQATTFLKCLCHAKRTDEAVDVLL 183
Query: 282 -RKSEVLMMHNKFSRAYDFVITQYAACGNK------DDVLRVWK---RYKQNLKVYNRGY 331
R SE+ + + S Y+ VI CG+ D V R+ K R ++ +N
Sbjct: 184 HRMSELSCVPDAIS--YNTVIKSL--CGDSRSQEALDMVQRMAKEGGRCSPDVVSFNT-- 237
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
VI K + A +F E + + D+ N ++DA C+ + KAE ++ +
Sbjct: 238 --VIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVD 295
Query: 392 RGTEPNVRTWYLMATGY 408
+G EP+ T+ + GY
Sbjct: 296 KGVEPDGVTYNAIIHGY 312
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 128/285 (44%), Gaps = 9/285 (3%)
Query: 122 VAIRLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMR 179
V I +D + K Q +++A S F + K+ P + +L++ A ++ ++M
Sbjct: 449 VNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKML 508
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
D G + Y S++ +++ G + + EM +G D + + A +
Sbjct: 509 DSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGE-- 566
Query: 240 GIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY 297
I+K A+ E +G+ D Y+ G VK G S + + + +H +RAY
Sbjct: 567 -IEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLD-TRAY 624
Query: 298 DFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWES 356
+ VI + G + ++ + K + L+ Y VI L K D ++ A +FEE +S
Sbjct: 625 NIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 684
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+ + ++ + + LID + + G + +A ++ + +G PN TW
Sbjct: 685 KAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTW 729
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 106/258 (41%), Gaps = 23/258 (8%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ A E A + M++ GL I N M++ + + S+ ++
Sbjct: 414 YNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLD 473
Query: 215 EKGIDCDKYTFSILLSACAAASDGEG----IDKIVAMMEA--DRGVVLDWTVYATAASGY 268
K D TF L+ DG G ++ + E D G + VY + +
Sbjct: 474 HKVCTPDSVTFCSLI-------DGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNF 526
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC----GNKDDVLRVWKRYK-QN 323
K G + + ++ MMH S ++ Y C G + +++ K Q
Sbjct: 527 FKCGRKEDGHKIYKE----MMHRGCSPDL-MLLNNYMDCVFKAGEIEKGRALFEEIKAQG 581
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
L R Y +I L+K + K+F E + + L D R N +ID +C+ G ++KA
Sbjct: 582 LTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAY 641
Query: 384 TLIYKAQLRGTEPNVRTW 401
L+ + + +G +P V T+
Sbjct: 642 QLLEEMKTKGLQPTVVTY 659
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 111/261 (42%), Gaps = 16/261 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++ L+ +A + A ++ +M+ + YN ++ + + G HE+
Sbjct: 239 LFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHEL 298
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME---ADRGVVLDWTVYATAASGYVK 270
+ +G+ D TF+ ++ A E +D+ V + E +++ V + Y T GY
Sbjct: 299 KSQGLVPDDVTFTSMIGVLCKA---ERVDEAVELFEELDSNKSVPCVYA-YNTMIMGYGS 354
Query: 271 AGLSDKALAVL----RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKV 326
G ++A ++L RK + + AY+ ++T G ++ LR+ + K +
Sbjct: 355 VGKFNEAYSLLERQKRKGCIPSV-----IAYNCILTCLGRKGKVEEALRILEAMKMDAAP 409
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
Y +I L K +E+A K+ + + L +I N +ID C+ L +A ++
Sbjct: 410 NLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIF 469
Query: 387 YKAQLRGTEPNVRTWYLMATG 407
+ P+ T+ + G
Sbjct: 470 LGLDHKVCTPDSVTFCSLIDG 490
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 112/256 (43%), Gaps = 10/256 (3%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y L+ A + A A+ +++QM++ G + +++ V+ + G SL+ E
Sbjct: 203 SAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDE 262
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M+ + D +++ + + K +++ +G+V D + + KA
Sbjct: 263 MKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKS-QGLVPDDVTFTSMIGVLCKAE 321
Query: 273 LSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
D+A+ + + + NK AY+ +I Y + G ++ + +R K+ + +
Sbjct: 322 RVDEAVELFEELD----SNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSV 377
Query: 330 -GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y C+++ L + +E A +I E + + ++ N LID C+ G L A +
Sbjct: 378 IAYNCILTCLGRKGKVEEALRILEAMK-MDAAPNLTSYNILIDMLCKAGELEAALKVQDS 436
Query: 389 AQLRGTEPNVRTWYLM 404
+ G PN+ T +M
Sbjct: 437 MKEAGLFPNIITVNIM 452
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 116/263 (44%), Gaps = 19/263 (7%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+A+ +++ M RG+V I YNS+++ + G+ L M KG++ D+ +++ L+
Sbjct: 325 EAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLI 384
Query: 230 SA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV---KAGLSDKALAVLRKSE 285
+ C E ++ M++ + + T Y T G K G + K V++
Sbjct: 385 NGYCKTWKVKEAMNLYNEMLQVGKSP--NVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYG 442
Query: 286 VLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-----RGYICVISSLLK 340
V + S+ Y + K+D L LK YN Y C+I L K
Sbjct: 443 V----SANSQIYGIFLDGLC----KNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCK 494
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
+E+A ++FE+ L D+ N +I +C+ G + A L K + G P++
Sbjct: 495 AGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIA 554
Query: 401 WYLMATGYLQNNQSEKGVEAMKK 423
+ + G+ + N+ E+ ++ + K
Sbjct: 555 YNTLLCGFCEGNKLEEVIKLLHK 577
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 129/317 (40%), Gaps = 45/317 (14%)
Query: 135 IEQAASY-FNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
+ A+ Y NC P + Y +++ ++A+ + ++M+ +G++ I Y+++
Sbjct: 223 LNDASQYGVNCKPGVI----TYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTL 278
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
++ + G + + L EM ++G+ D TFS+L+ K++ +M RG
Sbjct: 279 IHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVM-IQRG 337
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVL--------------------------RKSEVL 287
+V + Y + G+ G + A + + E +
Sbjct: 338 IVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAM 397
Query: 288 MMHNKFSR--------AYDFVIT---QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVIS 336
++N+ + Y ++ Q G+ + V K Y + ++ Y +
Sbjct: 398 NLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTY--GVSANSQIYGIFLD 455
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
L K D + A ++F E +S N +I + LID C+ G L A L K G +P
Sbjct: 456 GLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQP 515
Query: 397 NVRTWYLMATGYLQNNQ 413
+V T+ +M G+ + Q
Sbjct: 516 DVVTYNIMIHGFCKVGQ 532
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 101/224 (45%), Gaps = 13/224 (5%)
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMM 248
+N ++ + +Y +L SL +EM G+ D +T SIL + C E + + ++
Sbjct: 94 FNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGIL 153
Query: 249 EADRGVVLDWTVYATAASGY-VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC 307
RG + + Y T G ++ +S+ LR ++ N + Y +I
Sbjct: 154 R--RGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVT--YGTLIKGLCQT 209
Query: 308 GNKDDVLRVWK-------RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
GN + L++ K +Y N K Y +I L K + A+++FEE +++ +
Sbjct: 210 GNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMI 269
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
D+ + LI +C G +++ L + +G +P++ T+ ++
Sbjct: 270 PDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVL 313
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 134/286 (46%), Gaps = 12/286 (4%)
Query: 147 EKLKLPSVYIALLNAYACAKSAEKA-EIIMQQMRDR-GLVKKTIDYNSMMNVYYQTGNYK 204
++KL V+ + L++Y + + A ++I+ Q++ G+ T+ YN ++NV + K
Sbjct: 13 HQVKLGVVH-SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 71
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYA 262
L+S+ EM +GI D TF+ L+ A A + V M+E + RGV D T +
Sbjct: 72 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQ---VRTAVLMLEEMSSRGVAPDETTFT 128
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVITQYAACGNKDDVLR-VWKRY 320
T G+V+ G + AL V K+ +L M ++ + +I Y G +D L + +
Sbjct: 129 TLMQGFVEEGSIEAALRV--KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEI 186
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
+ Y ++ L + D + A K+ + D+ N +++ C+ G L
Sbjct: 187 ADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE 246
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
+A+ ++ + RG P++ T+ + N+ E+ ++ ++ V
Sbjct: 247 EAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 292
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 130/312 (41%), Gaps = 12/312 (3%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
L+N Y E A +QQ G I YN+ +N Q + +M M ++
Sbjct: 164 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE 223
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
G D D +T++I+++ E I+ M DRG + D T + T + ++
Sbjct: 224 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM-VDRGCLPDITTFNTLIAALCTGNRLEE 282
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAAC--GNKDDVLRVWKRYKQNLKVYNR-GYIC 333
AL + R+ V Y F I A C G+ LR+++ K + + Y
Sbjct: 283 ALDLARQVTV---KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 339
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+I +L + A + ++ ES N +ID C++ + +AE + + L+G
Sbjct: 340 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 399
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERD 453
N T+ + G ++ + + E + + ++ G +P+ + L +Y K+ D
Sbjct: 400 ISRNAITFNTLIDGLCKDKKIDDAFELINQ---MISEG--LQPNNITYNSILTHYCKQGD 454
Query: 454 IEGADYFIKLLT 465
I+ A ++ +T
Sbjct: 455 IKKAADILETMT 466
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 103/257 (40%), Gaps = 13/257 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY LLN + E + +M RG+ + +N++M + + ++ EM
Sbjct: 56 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 115
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+G+ D+ TF+ L+ E ++ A M + G +GY K G
Sbjct: 116 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM-LEMGCSATKVTVNVLINGYCKLGR 174
Query: 274 SDKALAVLRKSEV------LMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
+ AL +++ + +N F + Q G+ V+ V + + V+
Sbjct: 175 VEDALGYIQQEIADGFEPDQITYNTFVNG----LCQNDHVGHALKVMDVMVQEGHDPDVF 230
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y V++ L K +E A+ I + R DI N LI A C L +A L
Sbjct: 231 T--YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 288
Query: 388 KAQLRGTEPNVRTWYLM 404
+ ++G P+V T+ ++
Sbjct: 289 QVTVKGVSPDVYTFNIL 305
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 105/268 (39%), Gaps = 36/268 (13%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ++N E+A+ I+ QM DRG + +N+++ ++ L ++
Sbjct: 232 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 291
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
KG+ D YTF+IL++A D ++ M+ + G D Y T G
Sbjct: 292 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK-NSGCTPDEVTYNTLIDNLCSLGKL 350
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
KAL +L+ E C ++ YN +
Sbjct: 351 GKALDLLKDME------------------STGC-------------PRSTITYNT----I 375
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I L K +E AE++F++ + + + + N LID C+ + A LI + G
Sbjct: 376 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 435
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+PN T+ + T Y + +K + ++
Sbjct: 436 QPNNITYNSILTHYCKQGDIKKAADILE 463
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N A + A +++ MR +G+ YN ++ ++ N + SL EM
Sbjct: 477 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 536
Query: 215 EKGIDCDKYTFSILLSA-CAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
E G D T+ I+ C E D ++ M+ D+G + +++ + A G + G
Sbjct: 537 EVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV--DKGFIPEFSSFRMLAEGLLNLG 594
Query: 273 LSDKALAVLRKSEVLM 288
+ D +R E++M
Sbjct: 595 MDD---YFIRAIEIIM 607
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 120/274 (43%), Gaps = 9/274 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+ L+N +A ++ +M + G I N+++N +G + L+ +M
Sbjct: 258 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 317
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
E G + T+ +L+ C + ++ + M E R + LD Y+ G K G
Sbjct: 318 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE--RNIKLDAVKYSIIIDGLCKHG 375
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD---VLRVWKRYKQNLKVYNR 329
D A + + E+ + Y+ +I + G DD +LR + K N V
Sbjct: 376 SLDNAFNLFNEMEMKGITTNII-TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT- 433
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
+ +I S +K + AE++ +E R + D LID +C+ L KA ++
Sbjct: 434 -FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 492
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+G +PN+RT+ ++ GY + N+ + G+E +K
Sbjct: 493 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 526
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 128/294 (43%), Gaps = 29/294 (9%)
Query: 142 FNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
+ C P + Y +LN + A ++++M +R + + Y+ +++ + G
Sbjct: 320 YGCQPNAV----TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 375
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTV 260
+ +L +EME KGI + T++IL+ C A +G + M++ R + +
Sbjct: 376 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK--RKINPNVVT 433
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVL---MMHNKFSR---AYDFVITQYAACGNKDDV- 313
++ +VK G LR++E L M+H + Y +I + + D
Sbjct: 434 FSVLIDSFVKEG-------KLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 486
Query: 314 ----LRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
L V K N++ +N +I+ K + ++ ++F + R + D N L
Sbjct: 487 QMVDLMVSKGCDPNIRTFN----ILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 542
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
I +C G L+ A+ L + R PN+ T+ ++ G N +SEK +E +K
Sbjct: 543 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 596
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 109/259 (42%), Gaps = 40/259 (15%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V + L++++ +AE + ++M RG+ TI Y S+++ + + + K + +
Sbjct: 429 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 488
Query: 210 MHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ M KG D + TF+IL++ C A +G++ M + RGVV D Y T G+
Sbjct: 489 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM--SLRGVVADTVTYNTLIQGF 546
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
+ G + A + ++ V ++ N+ Y
Sbjct: 547 CELGKLNVAKELFQE-------------------------------MVSRKVPPNIVTYK 575
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
++ L E A +IFE+ E + DI I N +I C + A L
Sbjct: 576 ----ILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 631
Query: 389 AQLRGTEPNVRTWYLMATG 407
L+G +P V+T+ +M G
Sbjct: 632 LPLKGVKPGVKTYNIMIGG 650
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 144/355 (40%), Gaps = 17/355 (4%)
Query: 136 EQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
+ A F + LP+V + L +A A K + + +QM +G+ + M
Sbjct: 168 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 227
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADR 252
+N + + S M ++ + G + + TFS L++ C E ++ + M+E
Sbjct: 228 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM-- 285
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKD 311
G D T +G +G +A+ ++ K E N + Y V+ G
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT--YGPVLNVMCKSGQTA 343
Query: 312 DVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+ + ++ ++ N+K+ Y +I L K +++A +F E E + + +I N LI
Sbjct: 344 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 403
Query: 371 DAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA 430
+C G L+ R PNV T+ ++ +++ + + E K+ ++
Sbjct: 404 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE---MIHR 460
Query: 431 GTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLLNNIRNG 485
G P + + + KE ++ A+ + L+ K D R N + NG
Sbjct: 461 GI--APDTITYTSLIDGFCKENHLDKANQMVDLMVSK---GCDPNIRTFNILING 510
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 144/348 (41%), Gaps = 51/348 (14%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
L+ + ++G P D +II+ R A+ ++ + + + DV + D+I
Sbjct: 220 LITRMRQDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKL--ELDVQLSNDII 277
Query: 130 ---AKVQGIEQAASYFNCVP------EKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRD 180
AK + +A + V + L +V AL N C ++ E AE I ++MRD
Sbjct: 278 VGFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGN---CGRTVE-AEAIFEEMRD 333
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
GL +T YN+++ Y + G K + ++ EME G+ ++ T+S L+ A A E
Sbjct: 334 NGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWES 393
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
++ MEA V + V++ S Y G K+ VLR+ E
Sbjct: 394 ARIVLKEMEAS-NVQPNAYVFSRILSSYRDKGEWQKSFQVLREME--------------- 437
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
G + D RV+ Y +I + KF+ ++ A F+ S +
Sbjct: 438 -----NSGVRPD--RVF-------------YNVMIDTFGKFNCLDHAMATFDRMLSEGIE 477
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
D N LID +CR G +AE L + G P T+ +M +
Sbjct: 478 PDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSF 525
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 104/239 (43%), Gaps = 5/239 (2%)
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS--DGEGIDKIV 245
+ YN++++ + + +K +L+ M + G D +S+++ + + D + K+
Sbjct: 199 LTYNALISACARNNDLEKALNLITRMRQDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLY 258
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
+E D+ + LD + G+ KAG KAL L + + K + VI
Sbjct: 259 REIECDK-LELDVQLSNDIIVGFAKAGDLSKALEFLGVVQGSGLSVK-TATLVAVIWALG 316
Query: 306 ACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
CG + +++ + N LK R Y ++ +K ++ AE + E E + + +
Sbjct: 317 NCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQ 376
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ LIDAY G A ++ + + +PN + + + Y + +K + +++
Sbjct: 377 TYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLRE 435
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 146/346 (42%), Gaps = 43/346 (12%)
Query: 68 VPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLD 127
+ L+ + ++G P D +II+ R + ++ + + + DV + D
Sbjct: 204 INLISRMRQDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQCDKL--ELDVQLSND 261
Query: 128 LI---AKVQGIEQAASYFNCVPEKLKLP--SVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+I AK +A + V P + IA+++A + +AE I ++M+D G
Sbjct: 262 IIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNG 321
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
L KT YN ++ Y + G K + ++ EME G+ D+ T+S+L+ A + A E
Sbjct: 322 LKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESAR 381
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
++ MEA+ ++ + V++ + Y G K+ VL++
Sbjct: 382 IVLKEMEAN-NIMPNSYVFSRILASYRDRGEWQKSFQVLKEM------------------ 422
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
K+ +R + + Y +I + KF ++ A F++ S + D
Sbjct: 423 -------KNSGVRPDRHF----------YNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPD 465
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
N LID +C+ L +AE L + +G P V T+ +M +
Sbjct: 466 TVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSF 511
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++AY+ A E A I++++M ++ + ++ ++ Y G ++K ++ EM
Sbjct: 363 TYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEM 422
Query: 214 EEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ G+ D++ +++++ S +D M+ G+ D + T + KA
Sbjct: 423 KNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLS--EGIQPDTVTWNTLIDCHCKAE 480
Query: 273 LSDKALAVLRKSEVLMMHNKFS---RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
L ++A + + MM FS ++ +I + DDV + + + N
Sbjct: 481 LHERAEELFEE----MMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNV 536
Query: 330 -GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
Y +I K A + E+ +S L + N LI+AY ++GL +A
Sbjct: 537 VTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQA 590
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 127/319 (39%), Gaps = 48/319 (15%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P Y AL+NA A EKA ++ +MR G ++Y+ ++ ++ ++DS +
Sbjct: 184 PLTYNALINACARNNDLEKAINLISRMRQDGYPSDFVNYSLIIQSLVRSN---RIDSPIL 240
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
+ I CDK + LS D IV G+ KA
Sbjct: 241 QKLYSEIQCDKLELDVQLSN----------DIIV---------------------GFAKA 269
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLR---VWKRYKQN-LKVY 327
G +KA+ L ++ + S +I +A G+ ++ +++ K N LK
Sbjct: 270 GDPNKAMEFLG----MVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPK 325
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
R Y ++ +K ++ AE I E E + D + LIDAY G A ++
Sbjct: 326 TRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLK 385
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGY 447
+ + PN + + Y + +K + +K+ + +G R P + +
Sbjct: 386 EMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKE---MKNSGVR--PDRHFYNVMIDT 440
Query: 448 YKKERDIEGA-DYFIKLLT 465
+ K ++ A D F K+L+
Sbjct: 441 FGKFSCLDHAMDTFDKMLS 459
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D K + E+A F + EK P V + ++N++ + + + +M MR GL
Sbjct: 473 IDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGL 532
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ + Y +++++Y ++G + + +M+ G+ ++ L++A A E
Sbjct: 533 LPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVN 592
Query: 244 IVAMMEAD 251
+M AD
Sbjct: 593 AFRLMRAD 600
>gi|15225790|ref|NP_180247.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100043|sp|O81028.1|PP171_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g26790, mitochondrial; Flags: Precursor
gi|3426046|gb|AAC32245.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330252793|gb|AEC07887.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 799
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 168 AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSI 227
E+A ++Q+M+DRG+V I+Y ++++ Y G L+ EM G+ D T+++
Sbjct: 404 VEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNV 463
Query: 228 LLSACAAASDGEGIDKIVAMMEAD--------RGVVLDWTVY------------------ 261
L+S A E + +I M+A+ V+++ +
Sbjct: 464 LVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKC 523
Query: 262 ----ATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW 317
A+ GY +AGLS KA + E + + + + + F + DVL+
Sbjct: 524 PENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLF-FSLCIEGYLEKAHDVLKKM 582
Query: 318 KRYKQNLKVYNRGYIC--VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
Y +V +C +I + K + + A+ +F+ R L D+ +I YCR
Sbjct: 583 SAY----RVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCR 638
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
L KAE+L + RG +P+V T+ ++ YL+
Sbjct: 639 LNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLK 673
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 93/229 (40%), Gaps = 58/229 (25%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
++ A+ + +A+++ M +RGL+ Y M++ Y + +K +SL +M+++G
Sbjct: 597 MIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRG 656
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
I D T+++LL DR + LD + T + V+ + +
Sbjct: 657 IKPDVVTYTVLL---------------------DRYLKLDPEHHETCS---VQGEVGKR- 691
Query: 278 LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISS 337
+ SEVL +++A G DV+ Y +I
Sbjct: 692 ----KASEVL--------------REFSAAGIGLDVV---------------CYTVLIDR 718
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
K + +E A ++F+ L D+ LI +Y R+G + A TL+
Sbjct: 719 QCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLV 767
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 73/168 (43%), Gaps = 16/168 (9%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
K+ + +A F+ + E+ +P + Y +++ Y +KAE + + M+ RG+
Sbjct: 601 FCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPD 660
Query: 187 TIDYNSMMNVY-------YQTGNY------KKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ Y +++ Y ++T + +K ++ E GI D +++L+
Sbjct: 661 VVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQC 720
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL 281
++ E ++ M D G+ D Y T S Y + G D A+ ++
Sbjct: 721 KMNNLEQAAELFDRM-IDSGLEPDMVAYTTLISSYFRKGYIDMAVTLV 767
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 132/336 (39%), Gaps = 80/336 (23%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
AL+ AY ++A ++ Q + V N +MN + G L +L ++++
Sbjct: 151 ALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQL 210
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
G+ ++YT++I++ A + E ++ E+ G Y T +G G ++K
Sbjct: 211 GLCANEYTYAIVVKALCRKGNLEEAAMLLIENESVFG-------YKTFINGLCVTGETEK 263
Query: 277 ALAVLR-------------KSEVLMMHNKFS-----RAYDFVITQYAACGNKDDV---LR 315
A+A++ ++ + M+ F +A + VI + G DV L
Sbjct: 264 AVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLA 323
Query: 316 VWKRYKQNLKVYNR-GYI-----------CVISSLL------------------------ 339
V RY +N+ + G++ CVI SL+
Sbjct: 324 VIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMN 383
Query: 340 ----------KFDGM------ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
FD + E A ++ +E + R + D+ LID YC +G + A
Sbjct: 384 IFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDAL 443
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
LI + G P++ T+ ++ +G +N E+ +E
Sbjct: 444 DLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLE 479
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 156/373 (41%), Gaps = 36/373 (9%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNF--VLTPADVA---- 123
LL+ ++ G D+ ++K + R S A Q+ + M K V+T A +
Sbjct: 394 LLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLC 453
Query: 124 ----IRLDLIAKVQGIEQAASY-FNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQM 178
I++ L + + Y NC P + S I + C + E E+ ++M
Sbjct: 454 QSGNIKIALELHKNMLSDTSPYGINCKPNAI---SYSIIIDGLCKCGREDEARELF-KEM 509
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASD 237
+ G++ I Y S+++ + ++G +K L +EM + G+ D TFS+L+ C
Sbjct: 510 KALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKV 569
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY 297
E + + M++ RG + + Y T G ++D+ + +++ M K
Sbjct: 570 IEANELLEVMIQ--RGCIPNTVTYTTLVKGLC---MNDR---ISEATQLFMKMQKLGCLP 621
Query: 298 DFV-----ITQYAACGNKDDVLRVWKR-------YKQNLKVYNRGYICVISSLLKFDGME 345
D V + GN L + K+ Y N K Y +I L K +
Sbjct: 622 DVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGRED 681
Query: 346 SAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
A ++F+E ++ + ++ LI +CR G L A+ L + +G + N T+ +M
Sbjct: 682 EARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMI 741
Query: 406 TGYLQNNQSEKGV 418
G+ + Q +K +
Sbjct: 742 HGFCKEGQIDKAL 754
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 171/418 (40%), Gaps = 40/418 (9%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA------ 123
LL+ V+ G LD+ +IK + R S A Q+ M M K P +A
Sbjct: 32 LLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKK---LGCRPDAIAYGTLMK 88
Query: 124 -------IRLDLIAKVQGIEQAASY-FNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIM 175
I + L + + + Y C P + Y +++ + ++A +
Sbjct: 89 GLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVS----YSIIIDGLCKDRREDEARELF 144
Query: 176 QQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAA 234
++M+ +G++ I Y S+++ + ++G ++K L +EM + GI D T S+L+ C
Sbjct: 145 KEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKE 204
Query: 235 ASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
E + + M++ RG +LD Y+T G +A + + L +
Sbjct: 205 GKVIEANELLEVMIQ--RGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPD-A 261
Query: 295 RAYDFVITQYAACGNKDDVLRVWK-------RYKQNLKVYNRGYICVISSLLKFDGMESA 347
AY ++ GN + L++ + RY K Y +I L K + A
Sbjct: 262 IAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 321
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
++F+E +++ + D+ LI +C G KA+ L + G +P+V T +
Sbjct: 322 RELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTT-----SS 376
Query: 408 YLQNNQSEKG--VEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKL 463
L + +KG +EA K V+++ G C G K R + F+K+
Sbjct: 377 VLIDMLCKKGKVIEANKLLEVVIQRGC-IPDVVTCTTLVKGLCMKHRISKATQLFLKM 433
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/416 (18%), Positives = 154/416 (37%), Gaps = 77/416 (18%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
LL+ ++ G LD+ +IK + R S A ++ M M K + R D I
Sbjct: 213 LLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQK----------LGCRPDAI 262
Query: 130 A---KVQGIEQAASY------------------FNCVPEKLKLPSVYIALLNAYACAKSA 168
A ++G+ Q + C P + Y +++ +
Sbjct: 263 AYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLIS----YSIIIDGLCKDRRE 318
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
++A + ++M+ +G++ I Y ++++ + +G ++K L +EM + GI D T S+L
Sbjct: 319 DEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVL 378
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY-VKAGLSDKALAVLRKSEVL 287
+ +K++ ++ RG + D T G +K +S L+ ++
Sbjct: 379 IDMLCKKGKVIEANKLLEVV-IQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG 437
Query: 288 MMHNKFSRA---------------------------------------YDFVITQYAACG 308
M N + A Y +I CG
Sbjct: 438 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCG 497
Query: 309 NKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+D+ ++K K + + Y +I + + A+ +F E + D+ +
Sbjct: 498 REDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 557
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
LID C+ G + +A L+ RG PN T+ + G N++ + + K
Sbjct: 558 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMK 613
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 153/362 (42%), Gaps = 46/362 (12%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ L++ Y A A ++++MR GL+ + YN+++N + + G Y K SL+HE+
Sbjct: 150 FNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEIS 209
Query: 215 EK---------------------GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--D 251
E ++ D T++ ++S G+++ A+ E
Sbjct: 210 ESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQ---HGLEEARALYEEMII 266
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKD 311
G + D Y++ +G K G +A +LR+ + + + + AY +I G+
Sbjct: 267 NGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGV-DPNHVAYTTLIDSLFKAGS-- 323
Query: 312 DVLRVWKRYKQNLKVYNRG-----YIC--VISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
W+ + ++ RG +C ++ L K + AE +F NL +
Sbjct: 324 ----AWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSI 379
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
LID YC+ G + + E+L+ + + + PNV T+ + GY + ++ + MKK
Sbjct: 380 TYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKM 439
Query: 425 LVLLEAGTRWKPSKECLAACL-GYYKKERDIEGADYFIKLLTGKEIISADLQDRLLNNIR 483
L P+ A + GY K + D + ++ ++ L D L+NN++
Sbjct: 440 L-----DQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLK 494
Query: 484 NG 485
G
Sbjct: 495 RG 496
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 121/310 (39%), Gaps = 74/310 (23%)
Query: 137 QAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNV 196
+A S N +P + Y AL++ Y E+ E ++Q+M ++ + I Y+S++N
Sbjct: 367 RALSKLNLIPNSI----TYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIING 422
Query: 197 YYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAA-----ASD------------- 237
Y + G + ++M +M ++ I + Y ++IL+ C A A+D
Sbjct: 423 YTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVN 482
Query: 238 -------------GEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLR 282
G+ +D+ +++ RG++LD Y + G+ KAG AL ++
Sbjct: 483 NVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVE 542
Query: 283 KS----------------EVLMMHNKF-----------------SRAYDFVITQYAACGN 309
+ L+ H K+ Y+ +I Y G
Sbjct: 543 EMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGE 602
Query: 310 KDDVLRVWKRYKQNLKVYNRGYIC--VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
D+ L +W K + K+ C ++ L + +E A + E + ++ I
Sbjct: 603 LDNALELWNEMKSH-KIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHR 661
Query: 368 HLIDAYCRRG 377
L++A + G
Sbjct: 662 VLLNASSKSG 671
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 15/216 (6%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y AL+ Y + +KA QM + G+ + YN ++ G + D L +M+
Sbjct: 730 YNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMK 789
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
E G++ D T+ L+S + + ++ M A +G V + Y S + K G
Sbjct: 790 ENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVA-QGFVPKTSTYNVLISDFAKVGKM 848
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLK-----VYN 328
D+A +L + +V + S YD +I + D+ R K+ Y+ + K + +
Sbjct: 849 DQARELLNEMQVRGVPPS-SSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMND 907
Query: 329 RGYI-------CVISSLLKFDGMESAEKIFEEWESR 357
+G++ C+ S+ + M AEK+ +E S
Sbjct: 908 KGFVPCKSTIACISSTFARPGKMLDAEKLLKEIFSH 943
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 121/317 (38%), Gaps = 41/317 (12%)
Query: 123 AIRLDLIAKVQGIEQAASYFNCVP-EKLKLPSV-YIALLNAYACAKSAEKAEIIMQQMRD 180
AI +D K E A +N + LK+ +V + L+N K ++AE +++ +
Sbjct: 452 AILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTS 511
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
RGL+ ++Y S+M+ +++ G +++ EM EK I D T+++L++ E
Sbjct: 512 RGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEA 571
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVK------------------------------ 270
M+E G+ + Y Y K
Sbjct: 572 KSVYSGMIEM--GLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLV 629
Query: 271 -----AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNL 324
AG +KA+ VL + V+ +H + ++ + G + VL++ ++ L
Sbjct: 630 VGLSEAGEIEKAMNVLNEMSVMGIHPNLV-IHRVLLNASSKSGKANAVLQMHEQLVDMGL 688
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
K+ Y +I + + A + + D N LI YC + KA
Sbjct: 689 KINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALA 748
Query: 385 LIYKAQLRGTEPNVRTW 401
+ G PN+ T+
Sbjct: 749 TYTQMLNEGVSPNIVTY 765
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 131/310 (42%), Gaps = 18/310 (5%)
Query: 75 VEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQG 134
+E G + I+IK + +AL+ +W KS+ ++ P+ + ++ +
Sbjct: 579 IEMGLAPNQATYNIMIKAYCKQGELDNALE--LWNEMKSHKIM-PSSITCNTLVVGLSEA 635
Query: 135 --IEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
IE+A + N + P++ I LLNA + + A + +Q+ D GL Y
Sbjct: 636 GEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAY 695
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMME 249
N+++ V+ + KK S++ M G D T++ L+ C ++ + + M+
Sbjct: 696 NNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQML- 754
Query: 250 ADRGV---VLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
+ GV ++ + + G D+ ++++ + N + YD +I+ Y
Sbjct: 755 -NEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGL----NPDASTYDTLISGYGK 809
Query: 307 CGNKDDVLRVW-KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
GNK + +R++ + Q Y +IS K M+ A ++ E + R +
Sbjct: 810 IGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSST 869
Query: 366 PNHLIDAYCR 375
+ LI +C
Sbjct: 870 YDILICGWCN 879
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 127/282 (45%), Gaps = 7/282 (2%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP++L Y +LL+ A E A+ ++ +M +G+V+ YN+ ++ + G
Sbjct: 281 VPDRL----TYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQID 336
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
++ EM + + T+S ++ CA A+ E + M+ R + +D Y T
Sbjct: 337 LARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKL-RSISVDRVSYNTM 395
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-N 323
Y K G D+A+ ++ E M Y+ +++ Y G D+V R+++ K N
Sbjct: 396 VGIYAKLGRFDEAIGQCKEMESCGMKRDVV-TYNALLSGYGRYGMYDEVRRLFEEMKAWN 454
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
+ Y +I K + A ++++++ L D+ +ID+ C+ GL+ +
Sbjct: 455 IYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVESSI 514
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
L+ +G +PNV T+ + Q+ E GV +A+
Sbjct: 515 MLLIAMIEKGIKPNVVTFNSIIDASRQSPTLEYGVHGSSQAV 556
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 114/270 (42%), Gaps = 4/270 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEM 213
+ A+++AY A + + MR G+ I YNS+++ + ++ + EM
Sbjct: 216 FSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEVDFDVVVKFFDEM 275
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+GI D+ T++ LLS CA+ E K+++ M+ +G+V D Y T K G
Sbjct: 276 LAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMD-QKGIVRDAFTYNTYLDTLCKGGQ 334
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYI 332
D A VL + + Y +I A +D L +++ K +++ V Y
Sbjct: 335 IDLARRVLEEMSSRRVWPTVV-TYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYN 393
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
++ K + A +E ES + D+ N L+ Y R G+ + L + +
Sbjct: 394 TMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAW 453
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
PN T+ M Y + ++ ++ K
Sbjct: 454 NIYPNTLTYSTMIDVYTKGGMFQEAMDVYK 483
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
LD + K I+ A + + P+V Y +++ A A E A + ++M+ R +
Sbjct: 326 LDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSI 385
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ YN+M+ +Y + G + + EME G+ D T++ LLS + + +
Sbjct: 386 SVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRR 445
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR 282
+ M+A + + Y+T Y K G+ +A+ V +
Sbjct: 446 LFEEMKA-WNIYPNTLTYSTMIDVYTKGGMFQEAMDVYK 483
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 135/297 (45%), Gaps = 24/297 (8%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
NC P + Y L+ ++ K KA ++ +M + L + YNS+++V + G+
Sbjct: 419 NCRPNE----RTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGH 474
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILL-SACAAASDGEGIDKIVAMMEADRGVVLDWTVY 261
+ L+ ++E G+ D++T+S+ + + C + E D ++ E +G+ + +Y
Sbjct: 475 FDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKE--KGIKANEVMY 532
Query: 262 ATAASGYVKAGLSDKALAVLRKSEVLMMHNK----FSRAYDFVITQYAACGN---KDDVL 314
G+ KAG D+A+++L + MH++ S Y+ +I Y C ++ +
Sbjct: 533 TALIDGHCKAGKIDEAISLLER-----MHSEDCLPNSSTYNSLI--YGVCKEGKVQEGLS 585
Query: 315 RVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
V K +K Y +I +L+ + A ++F + S D+ I YC
Sbjct: 586 MVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYC 645
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAG 431
G + +AE ++ + G P+ T+ L+ + Y + + +K+ +L+AG
Sbjct: 646 TSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKR---MLDAG 699
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/255 (18%), Positives = 110/255 (43%), Gaps = 7/255 (2%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ +M + +V N+M+N Y + GN + + + ++ + G+ D +T++ L+
Sbjct: 201 VYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYC 260
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF 293
+D K+ MM ++G + Y T G +AG D+ +++ +K + + +
Sbjct: 261 RNNDVNSAYKVFNMM-PNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKK---MREDDCY 316
Query: 294 SRAYDFVITQYAACGNKDDV--LRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKI 350
+ + +A GN ++ + ++ ++ N Y ++ ++ K ++ + +I
Sbjct: 317 PTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRI 376
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
E + L + N LI YC G + A ++ + PN RT+ + G+ +
Sbjct: 377 LNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSK 436
Query: 411 NNQSEKGVEAMKKAL 425
K + + K L
Sbjct: 437 RKHVHKAMTLLSKML 451
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 6/200 (3%)
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEK-LKLPSV-YIALLNAYACAKSAEKAEIIMQQMRD 180
++ +D + K + +E+A FN + EK +K V Y AL++ + A ++A ++++M
Sbjct: 498 SVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHS 557
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
+ + YNS++ + G ++ S++ M + G+ T++IL+ D +
Sbjct: 558 EDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDH 617
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL-RKSEVLMMHNKFSRAYDF 299
+++ M G D Y Y +G +A ++ R E +M + S Y
Sbjct: 618 ANRVFNQM-VSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPD--SLTYTL 674
Query: 300 VITQYAACGNKDDVLRVWKR 319
+I+ Y G D V KR
Sbjct: 675 LISAYERLGLAYDAFNVLKR 694
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 141/323 (43%), Gaps = 22/323 (6%)
Query: 119 PADVAIRL-DLIAKVQGIEQAASYFNCVPEKLKL-PSV--YIALLNAYACAKSAEKAEII 174
P DV + L AK + +A F +P P++ + LLNA+ + +AE
Sbjct: 76 PEDVPLTLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENF 135
Query: 175 MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAA 234
+ + YN +M V + G ++K L+ M G+ D+ T+ L+ A
Sbjct: 136 FKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAK 195
Query: 235 ASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK--SEVLMMHN 291
+ D G ++ M E RGV D Y G+ K G KA + + E L+ +
Sbjct: 196 SGDLGFALEVFDEMRE--RGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPS 253
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKI 350
S Y+ +I+ CG + L +W+R K+N + + Y +I L + + A K+
Sbjct: 254 VVS--YNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKV 311
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL---IYKAQLRGTEPNVRTWYLMATG 407
+EE R + D+ N +++ C+ G + + L + K LR NVR++ + G
Sbjct: 312 YEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLR----NVRSYNIFLKG 367
Query: 408 YLQNNQSEKGVEAMKKALVLLEA 430
+N + + +AM LLEA
Sbjct: 368 LFENGKVD---DAMMLWDGLLEA 387
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 112/265 (42%), Gaps = 32/265 (12%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS---LMH 211
Y +L+NA ++A+ +++ M RG + N +++ + + + KLDS +
Sbjct: 429 YSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVK---HSKLDSAVKVFR 485
Query: 212 EMEEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
EM KG +++IL++ A E D + M+E +G D Y+T G +
Sbjct: 486 EMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLE--KGWKPDIITYSTLIGGLYE 543
Query: 271 AGLSDKALAVLR-------KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ- 322
+ + D AL + K +++M Y+ VI + + G +D L+++ +Q
Sbjct: 544 SNMMDAALRLWHQFLDTGHKPDIIM--------YNIVIHRLCSSGKVEDALQLYSTLRQK 595
Query: 323 ---NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
NL +N ++ K E A KI+ L DI N + C G +
Sbjct: 596 KCVNLVTHNT----IMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRV 651
Query: 380 HKAETLIYKAQLRGTEPNVRTWYLM 404
A + A +RG P TW ++
Sbjct: 652 TDAVGFLDDALVRGFLPTAITWNIL 676
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 174/413 (42%), Gaps = 53/413 (12%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV-- 122
++M L+ + E G D+ ++K F KR AL++ M P V
Sbjct: 147 EAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSY 206
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRD 180
AI ++ +++A + F + ++ P+V Y +++ A+ ++AE + QQM D
Sbjct: 207 AIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMID 266
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS-ACAAASDGE 239
+G+ YN +++ Y G +K++ ++ EM G+ D YT+ LL+ C E
Sbjct: 267 KGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCRE 326
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RA 296
+M+ +G+ + +Y GY G AL+ + LM+ N S
Sbjct: 327 ARFLFDSMIR--KGIKPNVAIYGILIHGYATKG----ALSEMHDLLNLMVENGLSPDHHI 380
Query: 297 YDFVITQYAACGNKDDVLRVWKRYKQ---NLKVYNRGYIC--------VISSLLKFDGM- 344
++ + T YA D+ + ++ + KQ + V N G + V ++LKF+ M
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMM 440
Query: 345 ------------------------ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
E A++ + E ++ + D+ N ++ C +G +
Sbjct: 441 NEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVM 500
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTR 433
KA+ LI + GT P V ++ + G+ + + EA K V+L G +
Sbjct: 501 KAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRID---EAAKSLDVMLSVGLK 550
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 110/290 (37%), Gaps = 18/290 (6%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
++Y L++ YA + + ++ M + GL +N + Y + + + ++
Sbjct: 344 AIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNK 403
Query: 213 MEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
M+++G+ D + L+ A C + + K MM + GV + V+ + G
Sbjct: 404 MKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMM--NEGVAPNIFVFNSLVYGLCTV 461
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG--NKDDVLRVWKRYKQNLKVYNR 329
+KA K M N+ R D V C K V++ + +V R
Sbjct: 462 DKWEKA-----KEFYFEMLNQGIRP-DVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTR 515
Query: 330 ----GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
Y +I ++ A K + S L D N L+ YCR G + A +
Sbjct: 516 PGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGV 575
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWK 435
+ G P V T+ + G + + EA + L ++ +G +W
Sbjct: 576 FREMLRNGITPGVVTYSTILHGLF---TTRRFSEAKELYLNMITSGKQWN 622
>gi|242050640|ref|XP_002463064.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
gi|241926441|gb|EER99585.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
Length = 558
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 146/359 (40%), Gaps = 58/359 (16%)
Query: 88 IIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYF----- 142
++I++ + HA+ + WM + N+ + + L A+ ++QA F
Sbjct: 122 LLIREITISGSLKHAVHVFRWMKIQENYCARNDIYGMMIRLHARHNQVDQARGLFFEMQE 181
Query: 143 -NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
C P+ Y +L++A+A A A IM M+ + YN+++N G
Sbjct: 182 WRCKPDT----DTYNSLIHAHARAGQWRWAINIMDDMQRAAIPPSRTTYNNVINACGAAG 237
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSA-------------------CAAASD----- 237
N+KK L +M E G+ D T +I+LSA A D
Sbjct: 238 NWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMN 297
Query: 238 ------------GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
GE I+ +M E D Y + Y G ++ AV
Sbjct: 298 IVIHCLVKVALYGEAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQAENCKAVFD--- 354
Query: 286 VLMMHNKFSR----AYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLK 340
MM + R +Y+ ++ YA+ G + L +K KQN K Y ++++ +
Sbjct: 355 --MMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGFKPDIVSYTSLLNAYGR 412
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIP-NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
E A ++F E +N C ++ N LIDAY G+L +A +L+++ + G +P+V
Sbjct: 413 SALPEKAREVFNEMR-KNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDV 470
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +LLNAY + EKA + +MR + YN++++ Y G K+ SL+HEME
Sbjct: 403 YTSLLNAYGRSALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEME 462
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ GI D + S LL+AC I I+A ++ RG+ L+ Y + Y+ G
Sbjct: 463 QDGIQPDVISISTLLTACGRCRQPTKIGIILAAAKS-RGIQLNTVAYNSGIGSYLSLGDY 521
Query: 275 DKAL 278
KAL
Sbjct: 522 KKAL 525
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
LL A + K II+ + RG+ T+ YNS + Y G+YKK L M
Sbjct: 476 LLTACGRCRQPTKIGIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALELYTSMRTGN 535
Query: 218 IDCDKYTFSILLSA 231
+ D T++IL+S
Sbjct: 536 VKPDAVTYNILISG 549
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 129/275 (46%), Gaps = 15/275 (5%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+ +A F+ + ++ P+V Y ++++A A++ +KA+ I++QM G+ + YN+
Sbjct: 227 VGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNT 286
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS-ACAAASDGEGIDKIVAMMEAD 251
+++ Y G +K+ + EM +G+ + T S ++ C E + +M+
Sbjct: 287 LIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLA-- 344
Query: 252 RGVVLDWTVYATAASGYVKAG----LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC 307
+G L+ Y+T GY AG +S+ ++R V H ++ ++ YA C
Sbjct: 345 KGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQH-----VFNILVNGYAKC 399
Query: 308 GNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
G + + +++ K+ L Y+ VI + + M+ A F + + + +
Sbjct: 400 GMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVY 459
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
LI +C G L KAE L+Y+ + +G P + ++
Sbjct: 460 QCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSF 494
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 138/355 (38%), Gaps = 49/355 (13%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y+A+++A+ S + A M D+G+ Y ++ + G+ K + L++E+
Sbjct: 424 YLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIR 483
Query: 215 EKGIDCDKYTFSILLSACAAAS--------------DGEGIDK------------IVAMM 248
KG+ +F+ L++ GE D I M
Sbjct: 484 NKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMS 543
Query: 249 EADR--------GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAY 297
EA R G+ D Y T +G K G D L + R+ ++H + Y
Sbjct: 544 EAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRE----LLHKGVKPTTFTY 599
Query: 298 DFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWES 356
++ G +++ + + V Y +++ L + + E A +F++ +
Sbjct: 600 GIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCA 659
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
N+ DI I N +I + +AE L G P V+T+ +M ++N E
Sbjct: 660 MNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIM----MENLIKEG 715
Query: 417 GVEAMKKAL-VLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEII 470
VE + V+L++G P+ + + ++ +I A ++ + GK I+
Sbjct: 716 SVEEAEGVFSVMLKSG--LSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSIL 768
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 12/208 (5%)
Query: 223 YTFSILLSACAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKALAV 280
YT+SIL+ C A +D A +G+ D V ++ G A +D+A+ V
Sbjct: 104 YTYSILIDCCCRARR---LDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 281 L--RKSEVLMMHNKFSRAYDFVITQYAACGNKD---DVLRVWKRYKQNLKVYNRGYICVI 335
L R E+ + + S Y V+ G D+LR+ + Y V+
Sbjct: 161 LFHRMPELGCVPDAIS--YSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVV 218
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
L K + A +F E + + ++ N +I A C+ + KA+ ++ + G +
Sbjct: 219 HGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQ 278
Query: 396 PNVRTWYLMATGYLQNNQSEKGVEAMKK 423
P+ T+ + GY Q ++ V K+
Sbjct: 279 PDNVTYNTLIHGYSTLGQWKQAVRMFKE 306
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 13/280 (4%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K Q +++A + +K P V Y +++ A++ ++A+ ++Q M D+ +
Sbjct: 276 IDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDV 335
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS-ACAAASDGEGID 242
YN +++ Y TG +K++ + EM +G+D D T+S+LL C E
Sbjct: 336 KPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARK 395
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDF 299
M+ +G+ + T+Y GY G A+A L LM+ N S ++
Sbjct: 396 IFYCMIR--KGIKPNVTIYGILLHGYAARG----AIADLTDLLDLMVANGISPNNYIFNI 449
Query: 300 VITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
V+ YA D+ + ++ R Q+ L Y +I +L K ++ A F + +
Sbjct: 450 VLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDG 509
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
+ + + N L+ C KAE L ++ +G PNV
Sbjct: 510 VTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNV 549
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 113/268 (42%), Gaps = 44/268 (16%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
NC P + Y +++ A++ ++AE ++Q M D+G+ + Y+++++ +
Sbjct: 194 NCTPNVV----TYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQA 249
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTV 260
+ + ++ M +KG+ D T++ ++ A + +D+ +++ D+GV D
Sbjct: 250 VDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKA---QAVDRAEGVLQHMIDKGVKPDVVT 306
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
Y T G KA D+A VL+ + K
Sbjct: 307 YNTIIDGLCKAQAVDRADGVLQH-------------------------------MIDKDV 335
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
K +++ YN C+I L + + EE +R L D+ + L+D C+ G
Sbjct: 336 KPDIQTYN----CLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCT 391
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGY 408
+A + Y +G +PNV + ++ GY
Sbjct: 392 EARKIFYCMIRKGIKPNVTIYGILLHGY 419
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 144/365 (39%), Gaps = 42/365 (11%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV--AI 124
+ LLD V G + I++ + A+ I M++ L+P V I
Sbjct: 428 LTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHG---LSPDVVTYGI 484
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+D + K+ ++ A FN + P+ V+ +L+ EKAE + +M D+G
Sbjct: 485 LIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQG 544
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI 241
+ + +N++M G L+ ME G+ + +++ L+ C A E
Sbjct: 545 VRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAA 604
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-------------SEVL- 287
+ M+ G+ D Y T GY K G D A + R+ S +L
Sbjct: 605 QLLDVMVSV--GLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQ 662
Query: 288 -MMHNK-FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGME 345
+ H + FS A + + + G + W Y N+ +++ L K + ++
Sbjct: 663 GLFHTRRFSEAKELYLNMIKS-GQQ------WDIYTYNI---------ILNGLCKTNCVD 706
Query: 346 SAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
A KIF+ S++L +I +ID + G A L G PNV T+ +M
Sbjct: 707 EAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMM 766
Query: 406 TGYLQ 410
+Q
Sbjct: 767 KNIIQ 771
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 155/368 (42%), Gaps = 51/368 (13%)
Query: 64 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA 123
+++M LL + E G ++ ++K KR AL++ M + TP V
Sbjct: 142 DEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVT 201
Query: 124 IR--LDLIAKVQGIEQAASYFNCVPEK-LKLPSV-YIALLNAYACAKSAEKAEIIMQQMR 179
+D + K Q +++A + +K +KL V Y +++ A++ ++AE ++Q M
Sbjct: 202 YNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMI 261
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
D+G+ + YN++++ + + + ++ M +KG+ D T++ ++ A +
Sbjct: 262 DKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVD 321
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
D ++ M D+ V D Y GY+ G + V+R+ E + ++R D
Sbjct: 322 RADGVLQHM-IDKDVKPDIQTYNCLIHGYLSTG---EWKEVVRRLEEM-----YARGLDP 372
Query: 300 VITQYA-----ACGN-------KDDVLRVWKRYKQNLKVYN--------RGYICVISSLL 339
+ Y+ C N K + K K N+ +Y RG I ++ LL
Sbjct: 373 DVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLL 432
Query: 340 KF---DGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
+G+ IF N ++ AY ++ ++ +A + + G P
Sbjct: 433 DLMVANGISPNNYIF---------------NIVLCAYAKKAMIDEAMHIFSRMSQHGLSP 477
Query: 397 NVRTWYLM 404
+V T+ ++
Sbjct: 478 DVVTYGIL 485
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 168/391 (42%), Gaps = 37/391 (9%)
Query: 65 DSMVPLLDQWVEEGRPLDM---EQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTP-- 119
D + L D+ + RP + L ++ + R A+ + M + + + P
Sbjct: 31 DDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDL 90
Query: 120 ADVAIRLDLIAKVQGIEQAASYFNCVPEK-LKLPSVYI-ALLNAYACAKSAEKA-EIIMQ 176
+I ++ IE + F + + ++ V I LLN AK ++A +I+++
Sbjct: 91 CTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLR 150
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM-EEKGIDC--DKYTFSILLSACA 233
+M + G + + N+++ ++ L+H M E+ G +C + T++ ++
Sbjct: 151 RMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLC 210
Query: 234 AASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
A + +D+ +++ D+GV LD Y+T G KA D+A VL+ M +
Sbjct: 211 KA---QAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQH-----MID 262
Query: 292 KFSR----AYDFVI---TQYAACGNKDDVLR--VWKRYKQNLKVYNRGYICVISSLLKFD 342
K + Y+ +I + A + VL+ + K K ++ YN +I L K
Sbjct: 263 KGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNT----IIDGLCKAQ 318
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
++ A+ + + +++ DI+ N LI Y G + + + RG +P+V T+
Sbjct: 319 AVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYS 378
Query: 403 LMATGYLQNNQSEKGVEAMKKALVLLEAGTR 433
L+ YL N K EA K ++ G +
Sbjct: 379 LLLD-YLCKNG--KCTEARKIFYCMIRKGIK 406
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 182/415 (43%), Gaps = 35/415 (8%)
Query: 53 LYRMLSPMGDPN--DSMVPLL-DQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWM 109
L ++ P D N ++PLL DQ D+ IIK +F AL + ++
Sbjct: 76 LQTLIHPSFDSNRFHEILPLLFDQPSSSSLSWDILG---IIKGLGFNNKFDLALSLFDFI 132
Query: 110 TKKSNFV--LTPADVAIRLDLIAKVQGIEQAASYF-NCVPEKLKLPSV-YIALLNAYACA 165
+++ V L + +A+ + ++ K + +AAS N + ++ Y +L+ AYA
Sbjct: 133 RTRNDRVSLLNGSVIAVIVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANN 192
Query: 166 KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEEKGIDCDKYT 224
K A + +M++ G I YN+++NVY + G + K+ +L+ +M+ G+ D T
Sbjct: 193 KKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCT 252
Query: 225 FSILLSACAAAS-DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
++ L+S C A S E +D + A G D Y Y K+ +A+ VL++
Sbjct: 253 YNTLISCCRAGSLYEEALDLFEEIKVA--GFRPDAVTYNALLDVYGKSRRPKEAMEVLKQ 310
Query: 284 SEVLMMHNKFSRA---YDFVITQYAACGNKDDVLRVWKR--YKQNLKVYNRGYICVISSL 338
M N F + Y+ +++ Y G +D L V KR + +K Y ++S
Sbjct: 311 ----MESNSFRPSVVTYNSLVSAYVRGGLLEDAL-VLKRKMVDKGIKPDVYTYTTLLSGF 365
Query: 339 LKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
+ E A ++FEE +I N LI Y RG + + + ++ P++
Sbjct: 366 VNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDI 425
Query: 399 RTWYLMATGYLQNNQSEK--GV-EAMKKALVLLEAGTRWKPSKECLAACLGYYKK 450
TW + + QN + GV E MK+ +R+ P ++ + Y +
Sbjct: 426 VTWNTLLAVFGQNGMDSEVSGVFEEMKR--------SRFAPERDTFNTLISAYGR 472
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 127/312 (40%), Gaps = 61/312 (19%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y ALL+ Y ++ ++A +++QM + YNS+++ Y + G + L +M
Sbjct: 287 TYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKM 346
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+KGI D YT++ LL SG+V AG
Sbjct: 347 VDKGIKPDVYTYTTLL------------------------------------SGFVNAGK 370
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-----QNLKVYN 328
+ A+ V + + ++ +I Y G +++++V+K K ++ +N
Sbjct: 371 EELAMEVFEEMRKVGCKPNIC-TFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWN 429
Query: 329 RGYICVISSLLKFDGMES-AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
+ ++ +GM+S +FEE + + N LI AY R G +A
Sbjct: 430 -----TLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYK 484
Query: 388 KAQLRGTEPNVRTW----YLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAA 443
+ G P++ T+ +A G L QSEK + MK + G KP++ ++
Sbjct: 485 RMLEAGVSPDLSTYNAVLATLARGGLW-EQSEKVLAEMK------DGGC--KPNEVTYSS 535
Query: 444 CLGYYKKERDIE 455
L Y R++E
Sbjct: 536 LLHAYANGREVE 547
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
A+L+ Y K KA I+ M + GL YNS+M +Y +T N+ K + + E+ +K
Sbjct: 605 AMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDK 664
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
GI+ D +++I++ A + +I+ M+ V D Y T + Y + +
Sbjct: 665 GIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVP-APVPDVVTYNTFIAAYAADSMFVE 723
Query: 277 ALAVLR---KSEVLMMHNKFSRAYDF 299
A+ V+R K HN ++ D+
Sbjct: 724 AIDVIRYMIKQGCKPNHNTYNSIVDW 749
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 162/374 (43%), Gaps = 51/374 (13%)
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
++V G+ + PE+ + L++AY S ++A ++M + G+
Sbjct: 442 SEVSGVFEEMKRSRFAPER----DTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLST 497
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
YN+++ + G +++ + ++ EM++ G ++ T+S LL A A +G ++++ A+ E
Sbjct: 498 YNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYA---NGREVERMNALAE 554
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN 309
+Y SG +K VL S+V ++ RA+ ++ G
Sbjct: 555 E---------IY----SGTIKTHAVLLKTLVLVNSKVDLLVET-ERAF----LEFRKRGI 596
Query: 310 KDDV------LRVWKR--------------YKQNLKVYNRGYICVISSLLKFDGMESAEK 349
DV L ++ R Y+ L + Y ++ + + +E+
Sbjct: 597 SPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQ 656
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
IF E + + D+ N +I AYCR ++ +A+ +I + ++ P+V T+ Y
Sbjct: 657 IFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYA 716
Query: 410 QNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEI 469
++ VEA+ +++ G KP+ + + +Y K + + A F++ L +
Sbjct: 717 ADSMF---VEAIDVIRYMIKQGC--KPNHNTYNSIVDWYCKLKLRDEACSFVQNLGDLDP 771
Query: 470 -ISADLQDRLLNNI 482
IS D + RLL I
Sbjct: 772 QISEDEKSRLLERI 785
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 124/278 (44%), Gaps = 13/278 (4%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
+AK + + + + VP ++Y L+N Y + + A I +QM+ R + I
Sbjct: 351 VAKAEQVLEMLVHTGLVPTT----AIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHI 406
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMM 248
YN+++N + + + L+ EME+ G+D TF+ L+ A A E +++ M
Sbjct: 407 TYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDM 466
Query: 249 EADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYA 305
+ D+G+ + + + + K G +A+A+L M+H ++ Y+ +I Y
Sbjct: 467 Q-DKGIKSNVISFGSVVKAFCKNGKIPEAVAILDD----MIHKDVVPNAQVYNSIIDAYI 521
Query: 306 ACGNKDDV-LRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
G + L V K + Y ++ L K ++ AE++ ++ L D+
Sbjct: 522 ESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVV 581
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
N +I A C +G +A L+ + P +RT++
Sbjct: 582 SYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYH 619
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 25/278 (8%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
LLN KAE +++ + GLV T YN+++N Y Q + + S+ +M+ +
Sbjct: 341 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRH 400
Query: 218 IDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
I D T++ L++ C E D ++ M ++ GV + T Y +AG +K
Sbjct: 401 IRPDHITYNALINGLCKMEMITEAEDLVMEMEKS--GVDPSVETFNTLIDAYGRAGQLEK 458
Query: 277 ALAVLRKSEVLMMHNKF--SRAYDFVITQYAACGNK---------DDVLRVWKRYKQNLK 325
VL M +K S F A C N DD+ + K N +
Sbjct: 459 CFTVLSD-----MQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDM--IHKDVVPNAQ 511
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
VYN +I + ++ G E A + E+ +S + I N L+ C+ + +AE L
Sbjct: 512 VYNS----IIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEEL 567
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
IY +G P+V ++ + + +++ +E +++
Sbjct: 568 IYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQE 605
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 21/253 (8%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-C 232
+ +M DRG+ I YN+M++ + + G+ + L +M + G + T+++LLS C
Sbjct: 217 VFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLC 276
Query: 233 AAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH 290
A +D+ A+M+ ++ D Y+ G + G S L++ +S +
Sbjct: 277 RAGR----MDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGES---LKK 329
Query: 291 NKFSRAYDFVITQYAAC-----GNKDDVLR--VWKRYKQNLKVYNRGYICVISSLLKFDG 343
AY I C + VL V +YN +I+ +
Sbjct: 330 GVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNT----LINGYCQVRD 385
Query: 344 MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYL 403
++ A IFE+ +SR++ D N LI+ C+ ++ +AE L+ + + G +P+V T+
Sbjct: 386 LQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNT 445
Query: 404 MATGYLQNNQSEK 416
+ Y + Q EK
Sbjct: 446 LIDAYGRAGQLEK 458
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 113/269 (42%), Gaps = 9/269 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y +++ + E + QM G + YN +++ + G + +LM EM
Sbjct: 232 TYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEM 291
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ D +T+SIL D + + +GV++ + +G K G
Sbjct: 292 TSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFG-ESLKKGVIIGAYTCSILLNGLCKDGK 350
Query: 274 SDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNR 329
KA VL +++H + Y+ +I Y + ++++ K ++++ +
Sbjct: 351 VAKAEQVLE----MLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHI 406
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +I+ L K + + AE + E E + + N LIDAY R G L K T++
Sbjct: 407 TYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDM 466
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
Q +G + NV ++ + + +N + + V
Sbjct: 467 QDKGIKSNVISFGSVVKAFCKNGKIPEAV 495
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 123/275 (44%), Gaps = 5/275 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y ++N+ K+ A + +M + + + +NS++ + G K+ L HEM
Sbjct: 201 MYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEM 260
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
K I+ D YTFSIL+ A C + + + MM+ +GV+ D Y++ GY
Sbjct: 261 VLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMK--QGVIPDVVTYSSLMDGYCLVN 318
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGY 331
+KA V L + + +Y+ +I D+ L ++K + + Y
Sbjct: 319 EVNKAKHVFSTMSRLGV-APHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTY 377
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I L K + A ++ +E + + DI N LID C+ + KA L+ K +
Sbjct: 378 NSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKD 437
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
+G +P++ T+ ++ G + + + + + L+
Sbjct: 438 QGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLI 472
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 25/254 (9%)
Query: 176 QQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAA 234
Q+ +G+ + +N ++N Y G S+ ++ + G TF+ L++ C
Sbjct: 83 HQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLN 142
Query: 235 ASDGEGI---DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
E + D ++A+ G LD Y T +G K G + AL +L+K E ++ N
Sbjct: 143 GKLKEALHFHDHVIAL-----GFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLV-N 196
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVYNR---GYICVISSLLKFDG 343
Y+ +I D +++ KR ++ +N G+ CV+ L
Sbjct: 197 TDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGF-CVVGQL----- 250
Query: 344 MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYL 403
+ A +F E +N+ D+ + L+DA C+ G + +A+ ++ +G P+V T+
Sbjct: 251 -KEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSS 309
Query: 404 MATGYLQNNQSEKG 417
+ GY N+ K
Sbjct: 310 LMDGYCLVNEVNKA 323
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 115/281 (40%), Gaps = 19/281 (6%)
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRD 180
+I +D + K I +A + + ++ +P V Y +L++ Y KA+ + M
Sbjct: 273 SILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSR 332
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLD---SLMHEMEEKGIDCDKYTFSILLSACAAASD 237
G+ YN M+N G K +D SL EM KGI D T++ L+
Sbjct: 333 LGVAPHAHSYNIMIN---GLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGR 389
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY 297
++V M + G+ D Y + K DKA+A+++K + + Y
Sbjct: 390 ISYAWQLVDEMH-NNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSM-YTY 447
Query: 298 DFVITQYAACG---NKDDVLR--VWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
+ +I G N DV + + K Y N YN +I+ L K AE +
Sbjct: 448 NILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYN----IMINGLCKEGLFNEAEVLLS 503
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+ E+ + D +I A R+ KAE L+ + +RG
Sbjct: 504 KMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRG 544
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 10/164 (6%)
Query: 98 RFSHALQISMWMTKKSNFVLTPADVAIR---LDLIAKVQGIEQAASYFNCVPEKLKLPSV 154
R S+A Q+ M PAD+ +D++ K I++A + + ++ PS+
Sbjct: 389 RISYAWQLVDEMHNNG----IPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSM 444
Query: 155 YI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
Y L++ + A+ + Q + +G YN M+N + G + + + L+ +
Sbjct: 445 YTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSK 504
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL 256
ME GI D T+ ++ A + E +K++ M RG++L
Sbjct: 505 MENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMII-RGLLL 547
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 108/259 (41%), Gaps = 37/259 (14%)
Query: 151 LPSVYIA--LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
+P V+ ++NAY A E+A +++M G + YNS+++ Y G+ +
Sbjct: 63 VPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKG 122
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
++ M EKG+ +K T ++L+ E +K++ ME + GVV+D Y GY
Sbjct: 123 VLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGY 182
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
K G A+ V +D++L+V K NL V N
Sbjct: 183 CKVGKMGDAIRV-----------------------------RDEMLKVG--LKMNLFVCN 211
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+I+ K + E++ +L D L+D YCR GL KA + +
Sbjct: 212 S----LINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQ 267
Query: 389 AQLRGTEPNVRTWYLMATG 407
+G EP V T+ + G
Sbjct: 268 MLRKGIEPTVVTYNTLLKG 286
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 103/255 (40%), Gaps = 35/255 (13%)
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS 230
A ++ QMR +V M+N Y + G ++ + EME+ G + + +++ L+
Sbjct: 50 AVLVYDQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVD 109
Query: 231 ACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH 290
+ D EG ++ M +++GV+ + GY K ++A VLR+ E
Sbjct: 110 GYVSLGDIEGAKGVLKFM-SEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREME----- 163
Query: 291 NKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKI 350
+ V+ +YA Y +I K M A ++
Sbjct: 164 ----KEDGVVVDEYA-------------------------YGALIDGYCKVGKMGDAIRV 194
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+E L ++ + N LI+ YC+ G +H+ E L+ + +P+ ++ + GY +
Sbjct: 195 RDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCR 254
Query: 411 NNQSEKGVEAMKKAL 425
+ S K + L
Sbjct: 255 DGLSSKAFNVCDQML 269
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 136/338 (40%), Gaps = 18/338 (5%)
Query: 127 DLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
D KV +E+A + ++ PS+ Y +L+ +K K ++ +M RGL
Sbjct: 390 DGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLS 449
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI 244
+ Y +++ + G K S EM KG + S ++S+ + + +
Sbjct: 450 PNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANML 509
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYDFV 300
+ M D +VLD + ++ K L +S + KFS Y+
Sbjct: 510 LQKM-VDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAI-----KFSLPNNVVYNIA 563
Query: 301 ITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
+ G +D R + + N Y +I + A + +E ++ L
Sbjct: 564 MAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGL 623
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+I N L++ C+ G L +A L K L+G PNV T+ ++ GY ++ + ++
Sbjct: 624 VPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALD 683
Query: 420 AMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGA 457
K +L+ G PS ++ + + K+ D+E A
Sbjct: 684 LRGK---MLKEGI--SPSIITYSSLINGFCKQSDVEEA 716
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 105/253 (41%), Gaps = 19/253 (7%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ Y + KA + QM +G+ + YN+++ + G+YK L H M
Sbjct: 245 YCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLML 304
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGI----DKIVAMMEADRGVVLDWTVYATAASGYVK 270
++G+ ++ + LL D D I+A RG+ + T +G K
Sbjct: 305 QRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILA-----RGINKSIYAFNTMINGLCK 359
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLK 325
G D A ++ E L Y + Y GN ++ ++ ++ ++ +++
Sbjct: 360 MGEMDGAKETFKRMEELGCKPD-GITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIE 418
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+YN +I L + + E ++R L ++ LI +C +G L KA +
Sbjct: 419 MYNS----LIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSA 474
Query: 386 IYKAQLRGTEPNV 398
++ +G PNV
Sbjct: 475 YFEMIGKGFAPNV 487
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
L+ + K +++A F+ + K +P+V Y L++ Y + S +A + +M G+
Sbjct: 634 LNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGI 693
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
I Y+S++N + + + ++ L++EM+ +D TFS L+ C D + + K
Sbjct: 694 SPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSK 753
Query: 244 IVAMME 249
+ MM
Sbjct: 754 LHNMMH 759
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y ALLN + ++A + ++ +GL+ + YN +++ Y ++G+ ++ L +
Sbjct: 628 TTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGK 687
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTV--YATAASGYVK 270
M ++GI T+S L++ SD E K++ M+A +D T+ ++ G ++
Sbjct: 688 MLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASN---VDQTIATFSKLVEGCIQ 744
Query: 271 AG 272
G
Sbjct: 745 HG 746
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 118/307 (38%), Gaps = 51/307 (16%)
Query: 158 LLNAYACAKSAEKAEIIMQQM-RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
L+ Y E+AE ++++M ++ G+V Y ++++ Y + G + EM +
Sbjct: 142 LIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKV 201
Query: 217 GIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
G+ + + + L++ C EG ++ M + D + D Y T GY + GLS
Sbjct: 202 GLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLD--LKPDSYSYCTLVDGYCRDGLSS 259
Query: 276 KALAV----LRKS-EVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR- 329
KA V LRK E ++ Y+ ++ G+ D LR+W Q N
Sbjct: 260 KAFNVCDQMLRKGIEPTVV------TYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEV 313
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI------------------- 370
GY ++ L K A ++++ +R + I N +I
Sbjct: 314 GYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRM 373
Query: 371 ----------------DAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
D YC+ G + +A + K + P++ + + G + +
Sbjct: 374 EELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKI 433
Query: 415 EKGVEAM 421
K ++ +
Sbjct: 434 SKLIDLL 440
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 9/268 (3%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
NC P Y L+ + K+ KA ++ +M +R L + YN +++ + G+
Sbjct: 409 NCSPNA----RTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGD 464
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
L+ M E G+ D++T+S+ + E + ++ ++G+ + +Y+
Sbjct: 465 LGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLK-EKGIKANEVIYS 523
Query: 263 TAASGYVKAG-LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN-KDDVLRVWKRY 320
T GY K G +SD + + + N S Y+ +I Y N K+ L V
Sbjct: 524 TLIDGYCKVGKVSDGRFLLDKMLSAGCVPN--SITYNSLIDGYCKEKNFKEARLLVDIMI 581
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
K++++ Y +I +LLK D + A +F++ S D+ I I AYC G L
Sbjct: 582 KRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLK 641
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGY 408
AE LI K +G P+ + L Y
Sbjct: 642 DAEVLICKMNAKGIMPDTMLYTLFIDAY 669
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 155/361 (42%), Gaps = 25/361 (6%)
Query: 133 QGIEQAASYFNCVPEK--LKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
+ ++ A + F +P K L+ Y L++ + A+ ++A + QM + Y
Sbjct: 253 KNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTY 312
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA 250
++ Q G + ++ EM EK + +T+++L+ + S+ + KI+ M
Sbjct: 313 TVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGM-L 371
Query: 251 DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDFVITQYAAC 307
++G++ Y GY K GLS AL +L LM N S R Y+ +I +
Sbjct: 372 EKGLIPSVVTYNALIDGYCKKGLSASALEILS----LMESNNCSPNARTYNELILGFCRG 427
Query: 308 GNKDDVLRVW-----KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
N + + ++ + N+ YN +I K + SA K+ L D
Sbjct: 428 KNIHKAMSLLHKMLERKLQPNVVTYN----ILIHGQCKEGDLGSAYKLLSLMNESGLVPD 483
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ ID C+RGL+ +A +L + +G + N + + GY + + G +
Sbjct: 484 EWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLD 543
Query: 423 KALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEI-ISADLQDRLLNN 481
K +L AG P+ + + Y KE++ + A + ++ ++I +AD L++N
Sbjct: 544 K---MLSAGC--VPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDN 598
Query: 482 I 482
+
Sbjct: 599 L 599
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 11/254 (4%)
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
+M D + N+M+N Y + GN + + + ++ + G+ D +T++ L+
Sbjct: 194 EMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNK 253
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS-- 294
+ + + I M ++G + + Y G+ +A D+AL + + MH
Sbjct: 254 NVDAANAIFLSM-PNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQ-----MHEDNCWP 307
Query: 295 --RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIF 351
R Y +I G K + L ++K + N Y +I SL + + A+KI
Sbjct: 308 TVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKIL 367
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
+ L + N LID YC++GL A ++ + PN RT+ + G+ +
Sbjct: 368 NGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRG 427
Query: 412 NQSEKGVEAMKKAL 425
K + + K L
Sbjct: 428 KNIHKAMSLLHKML 441
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 143/374 (38%), Gaps = 61/374 (16%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D + L Q E+ + +II R + AL + MT+K +V
Sbjct: 291 DEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKH----CQPNVHT 346
Query: 125 RLDLIAKV---QGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMR 179
LI + + A N + EK +PSV Y AL++ Y + A I+ M
Sbjct: 347 YTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLME 406
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
YN ++ + + N K SL+H+M E+ + + T++IL+ D
Sbjct: 407 SNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLG 466
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV--------LRKSEVLMMHN 291
K++++M + G+V D Y+ K GL ++A ++ ++ +EV+
Sbjct: 467 SAYKLLSLMN-ESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVI---- 521
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
Y +I Y G D R+ + K+ + G CV +S+
Sbjct: 522 -----YSTLIDGYCKVGKVSD-----GRFLLD-KMLSAG--CVPNSITY----------- 557
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
N LID YC+ +A L+ R EP T+ ++ L++
Sbjct: 558 ---------------NSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKD 602
Query: 412 NQSEKGVEAMKKAL 425
++ ++ + + L
Sbjct: 603 DEFDQAHDMFDQML 616
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 7/174 (4%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPA--DVAIRLD 127
LLD+ + G + +I + K F A + M K+ + PA I +D
Sbjct: 541 LLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRD---IEPAADTYTILID 597
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+ K +QA F+ + P V+I A ++AY + AE+++ +M +G++
Sbjct: 598 NLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMP 657
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
T+ Y ++ Y + G+ ++ M E G + YT+S L+ + A E
Sbjct: 658 DTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKE 711
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 143/326 (43%), Gaps = 20/326 (6%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I +D + K + +A S F+ + E LP V + +L++ Y ++ E ++++MR
Sbjct: 193 IVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRS 252
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEG 240
G + YN+++N + + G + M+ +G+ + TFS + A C E
Sbjct: 253 GCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREA 312
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
+ K+ A M RG+ L+ Y G KAG D A+ +L + ++ +
Sbjct: 313 M-KLFAQMRV-RGMALNEFTYTCLIDGTCKAGRLDDAIVLLDE---MVRQGVPLNVVTYT 367
Query: 301 ITQYAACGNK-----DDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
+ C + +DVLR+ + K ++ Y +I E A + E +
Sbjct: 368 VLVDGLCKERKVAEAEDVLRMME--KAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
++ L DI + LI C L +A++L+ K G EPN + M ++ +
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485
Query: 416 KGVEAMKKALVLLEAGTRWKPSKECL 441
+ + ++K +L++G ++P+ CL
Sbjct: 486 EAIAMLQK---ILDSG--FQPNNGCL 506
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 97/238 (40%), Gaps = 23/238 (9%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ + +AE +++ M G+ + Y ++++ ++ N +K L+ EM+
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
KG++ D + L+ + ++ M+ + G+ ++ +Y T K+G
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD-ESGLEPNYIIYTTMMDACFKSGKV 484
Query: 275 DKALAVLRK-------------SEVLMMHNKFSR--------AYDFVITQYAACGNKDDV 313
+A+A+L+K +E + + N+ Y ++ Y GN D
Sbjct: 485 PEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 544
Query: 314 LRV-WKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+ K L++ Y C IS + M A ++F E + D + N LI
Sbjct: 545 FALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 602
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 108/262 (41%), Gaps = 20/262 (7%)
Query: 172 EIIMQQMRDRG--LVKKTID---------YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
I+++ RDR LV++ + +N +++ + G + SL M+E G
Sbjct: 162 HILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLP 221
Query: 221 DKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA--- 277
D TF+ L+ + + ++++V M G D Y + + K G + A
Sbjct: 222 DVVTFNSLIDGYGKCGELDEVEQLVEEMRRS-GCKADVVTYNALINCFCKFGRMETAYGY 280
Query: 278 LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVIS 336
A +++ V+ FS D + G + ++++ + + + + + Y C+I
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKE----GLVREAMKLFAQMRVRGMALNEFTYTCLID 336
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
K ++ A + +E + + ++ L+D C+ + +AE ++ + G
Sbjct: 337 GTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRA 396
Query: 397 NVRTWYLMATGYLQNNQSEKGV 418
N + + G+ N SEK +
Sbjct: 397 NELLYTTLIHGHFMNKNSEKAL 418
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 106/483 (21%), Positives = 188/483 (38%), Gaps = 57/483 (11%)
Query: 32 ATGTSTREVTISLRKGSSMYK-LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIII 90
A T R +T LR ++ L + L +D+M +L + E G D+ I++
Sbjct: 118 AFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILL 177
Query: 91 KKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKV--QG-IEQAASYFNCVPE 147
K K AL + M P DV +I + +G +++A S F+ + +
Sbjct: 178 KGLCDDKTSQQALDLLHIMADHKGRC--PLDVVAYTTVINGLLREGQLDKAYSLFDAMLD 235
Query: 148 KLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
+ P V Y ++++A + ++ +KA + +M G++ I Y S+++ Y +G K+
Sbjct: 236 RGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKE 295
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAA 265
+ +M G++ D T++ L+ KI + RG D T Y T
Sbjct: 296 AIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSL-VKRGHKPDSTTYGTLL 354
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDFVITQYAACGNKDDVLRVWKRYKQ 322
GY G AL + LMM ++ ++ YA D+ L V+ +Q
Sbjct: 355 HGYATEG----ALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQ 410
Query: 323 ---NLKVYNRG---------------------------------YICVISSLLKFDGMES 346
N + N G + +I L D +
Sbjct: 411 QGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDK 470
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
E++ E R +C D N ++ C++G + +A+ L G EPN T+ +
Sbjct: 471 VEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLID 530
Query: 407 GYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTG 466
GY + + + EAMK V++ G KPS + Y + IE ++ + G
Sbjct: 531 GYCLDGKMD---EAMKLLGVMVFNGV--KPSDVTYNTIINGYSQNGRIEDGLTLLREMDG 585
Query: 467 KEI 469
K +
Sbjct: 586 KGV 588
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 125/284 (44%), Gaps = 20/284 (7%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+++ + A+ K E + +M+ +V Y +++N Y + GN ++ ++ E
Sbjct: 204 YTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECV 263
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
G++ ++ T+ +L+ E + ++A M+ +GV L+ ++ T GY + G+
Sbjct: 264 GNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQG-QGVGLNQIIFNTMIDGYCRKGMV 322
Query: 275 DKAL---AVLRKSEV---LMMHNKFS------------RAYDFVITQYAACGNKDDVLRV 316
D AL A + K V + +N + Y +I+ + G+ + R+
Sbjct: 323 DDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRL 382
Query: 317 WKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
++ + + Y +I K + AE+ +E E + D+ L+ +C
Sbjct: 383 FREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCV 442
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
G + A L + + RGTEPNV + + +G + +SE +
Sbjct: 443 NGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQ 486
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 103/239 (43%), Gaps = 36/239 (15%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
+ A ++ M G+ + YNS+++ Y + + ++ ++ ME +GI+ T++IL
Sbjct: 148 DDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTIL 207
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM 288
+ + + A D ++ + M+A+ VV D +Y + Y +AG +A VL +
Sbjct: 208 VDSLSTARDISKVEALFNEMKANN-VVGDVYLYTAVINAYCRAGNMRRAAKVLDE----- 261
Query: 289 MHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAE 348
GN ++ R Y +I K ME+AE
Sbjct: 262 -----------------CVGN-------------GVEPNERTYGVLIKGFCKIGQMEAAE 291
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+ + + + + + I N +ID YCR+G++ A + + G E N+ T+ +A G
Sbjct: 292 MLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACG 350
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 124/279 (44%), Gaps = 10/279 (3%)
Query: 135 IEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
I++A S F + + P+VY AL+ C K+ KA ++ +M +R LV I YNS
Sbjct: 274 IDEAVSLFVRMKDDCCYPNVYTYTALIKGL-CRKNVHKAMGLLDEMLERNLVPDLITYNS 332
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
++ + G+ L+ M+E+G+ D+ T+ + ++ E ++ + +
Sbjct: 333 LIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSL-TEE 391
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC--GNK 310
GV + +Y+ GY K G D+A + K ++ N AY F + C GN
Sbjct: 392 GVSANVIMYSVLIDGYCKVGKVDEAGCLFEK---MLSKNCSPNAYTFNALIHGLCSAGNL 448
Query: 311 DDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
+ L ++ + K LK + +I +LK + A K ++ S R N
Sbjct: 449 KEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAF 508
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
I+ YC G + +AE ++ + + G P+ T+ + Y
Sbjct: 509 IEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAY 547
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 157/388 (40%), Gaps = 30/388 (7%)
Query: 33 TGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKK 92
+ TST T + + + +LS + PN P L + P + L
Sbjct: 21 SSTSTLLHTPPEAESDPSHLPHHLLSILSKPNWQNNPSLKSLLPAITPSHVSSL------ 74
Query: 93 FRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLP 152
F L ALQ S W+++ NF A L LI + + +P
Sbjct: 75 FSLNLDPHTALQFSYWISQTPNFKHNVDSYASLLTLIDHHKIVSD-------------VP 121
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID-YNSMMNVYYQTGNYKKLDSLMH 211
+ ++++ A A I ++M + K ++ YN ++ + + G +++ L
Sbjct: 122 KIIVSMIKCCYSAPDALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYT 181
Query: 212 EMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
EM E+ + D YTF+++++ C E + M++A G+ D+ + GY +
Sbjct: 182 EMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQA--GLSPDYFTSTSFILGYCR 239
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-R 329
+ D A V + M N+ +Y+ +I G D+ + ++ R K + N
Sbjct: 240 SKDVDSAFRVFEE-----MPNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVY 294
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +I L + + A + +E RNL D+ N LI CR G L A L+
Sbjct: 295 TYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLM 353
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ RG P+ RT+ ++N+ E+
Sbjct: 354 KERGLVPDQRTYGCFIDFLCKSNRVEEA 381
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/365 (19%), Positives = 138/365 (37%), Gaps = 69/365 (18%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K +E+A F+ + E+ +V Y L++ Y ++A + ++M +
Sbjct: 369 IDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNC 428
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA------------ 231
+N++++ GN K+ SL +M + G+ YTF+IL+
Sbjct: 429 SPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHK 488
Query: 232 ------------------------CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
C+A E D +V M E GV D Y +
Sbjct: 489 CLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKE--EGVPPDDFTYTSLIKA 546
Query: 268 YVKAGLSDKALAVLRK---SEVLMMHNKF----SRAYD--FVITQYAACG-----NKDDV 313
Y K GL+ A VL+ ++ H+ F + +D +V+ + G N DV
Sbjct: 547 YGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDV 606
Query: 314 L--RVWKRYKQNLKVY-------------NRGYICVISSLLKFDGMESAEKIFEEWESRN 358
+WK + ++ + ++ Y +IS + K + + A K+ ++ +
Sbjct: 607 PGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEG 666
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
+ + N +I C+ +A ++ G P + + G + ++E+G
Sbjct: 667 ISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGN 726
Query: 419 EAMKK 423
KK
Sbjct: 727 SVFKK 731
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 111/272 (40%), Gaps = 12/272 (4%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
+ + Y +K + A + ++M +R + YN +++ + G + SL M++
Sbjct: 232 SFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDD 287
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
+ YT++ L+ + + + + M+E R +V D Y + +G +AG D
Sbjct: 288 CCYPNVYTYTALIKGLCRKNVHKAMGLLDEMLE--RNLVPDLITYNSLIAGQCRAGHLDS 345
Query: 277 A--LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYIC 333
A L L K L+ R Y I ++ R++ + N Y
Sbjct: 346 AYRLLSLMKERGLVPDQ---RTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSV 402
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+I K ++ A +FE+ S+N + N LI C G L +A +L + G
Sbjct: 403 LIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMG 462
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
+P V T+ ++ L+ + + ++K +
Sbjct: 463 LKPTVYTFNILIGRMLKQGDFDDAHKCLQKMM 494
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 110/253 (43%), Gaps = 36/253 (14%)
Query: 156 IALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEE 215
+++++A A + +AE + +++R G+ +T YN+++ Y +TG K + ++ EME+
Sbjct: 310 VSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEK 369
Query: 216 KGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
+G+ D++T+S+L+ A A E ++ ME V + V++ +GY G
Sbjct: 370 RGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETG-DVQPNSFVFSRLLAGYRDRGEWQ 428
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVI 335
K VL+ + + G K D + Y VI
Sbjct: 429 KTFQVLK--------------------EMKSIGVKPD---------------RQFYNVVI 453
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
+ KF+ ++ A F+ S + D N LID +C+ G AE + + RG
Sbjct: 454 DTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL 513
Query: 396 PNVRTWYLMATGY 408
P T+ +M Y
Sbjct: 514 PCATTYNIMINSY 526
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 113/273 (41%), Gaps = 36/273 (13%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P Y AL+ A A EKA ++ +MR G ++Y+ ++ + K+DS+M
Sbjct: 199 PLTYNALIGACARNNDIEKALNLISRMRQDGYQSDFVNYSLVIQSLTRCN---KIDSVML 255
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
+ K I+ DK +E D +V D + G+ K+
Sbjct: 256 QRLYKEIERDK-------------------------LELDVQLVNDIIM------GFAKS 284
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRG 330
G +AL +L ++ + K + +I+ A G + +++ +Q+ +K +
Sbjct: 285 GDPSRALQLLGMAQATGLSAKTATLVS-IISALANSGRTLEAEALFEELRQSGIKPRTKA 343
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y ++ +K ++ AE + E E R + D + LIDAY G A ++ + +
Sbjct: 344 YNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME 403
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+PN + + GY + +K + +K+
Sbjct: 404 TGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKE 436
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 72/358 (20%), Positives = 136/358 (37%), Gaps = 45/358 (12%)
Query: 81 LDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAAS 140
LD++ + II F S ALQ+ + M + + A + + +A +A +
Sbjct: 269 LDVQLVNDIIMGFAKSGDPSRALQL-LGMAQATGLSAKTATLVSIISALANSGRTLEAEA 327
Query: 141 YFNCVPEKLKLP--SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYY 198
F + + P Y ALL Y + AE+++ +M RG+ Y+ +++ Y
Sbjct: 328 LFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYV 387
Query: 199 QTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDW 258
G ++ ++ EME + + + FS LL+ + + +++ M++ GV D
Sbjct: 388 NAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKS-IGVKPDR 446
Query: 259 TVYATAASGYVKAGLSDKALAVLRK-------------SEVLMMHNKFSR---------- 295
Y + K D A+ + + ++ H K R
Sbjct: 447 QFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEA 506
Query: 296 -----------AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDG- 343
Y+ +I Y DD+ R+ + K + N + ++L+ G
Sbjct: 507 MERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN---VVTHTTLVDVYGK 563
Query: 344 ---MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
A + EE +S L + N LI+AY +RGL +A G +P++
Sbjct: 564 SGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSL 621
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 27/261 (10%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+AE +M +G++ TI Y ++++ + + G+ + +EM + I D T++ ++
Sbjct: 757 EAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 816
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
S D K+ M RG+ D + +GY KAG A V
Sbjct: 817 SGFCQIGDMVEAGKLFHEMLC-RGLEPDIITFTELMNGYCKAGHIKDAFRV--------- 866
Query: 290 HNKFSRA--------YDFVITQYAACGNKDD----VLRVWK-RYKQNLKVYNRGYICVIS 336
HN +A Y +I G+ D + +WK + N+ YN +++
Sbjct: 867 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS----IVN 922
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
L K +E A K+ E+E+ L D L+DAYC+ G + KA+ ++ + +G +P
Sbjct: 923 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQP 982
Query: 397 NVRTWYLMATGYLQNNQSEKG 417
+ T+ ++ G+ + E G
Sbjct: 983 TIVTFNVLMNGFCLHGMLEDG 1003
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 129/293 (44%), Gaps = 10/293 (3%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+ L+ ++ + +A F+ + + LP VY L++ + A +M R +
Sbjct: 746 IGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDI 805
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGID 242
+ Y ++++ + Q G+ + L HEM +G++ D TF+ L++ C A +
Sbjct: 806 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFR 865
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS-EVLMMHNKFSRAYDFVI 301
M++A G + Y T G K G D A +L + ++ + N F+ Y+ ++
Sbjct: 866 VHNHMIQA--GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT--YNSIV 921
Query: 302 TQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
GN ++ +++ ++ L Y ++ + K M+ A++I E + L
Sbjct: 922 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQ 981
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY-LQNN 412
I N L++ +C G+L E L+ +G PN T+ + Y ++NN
Sbjct: 982 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNN 1034
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 44/242 (18%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF---- 225
+A ++ M +G I Y++++N Y + G K+ L+ +M++KG+ + YT+
Sbjct: 687 EAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSII 746
Query: 226 SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
+L C A E +++ +G++ D VY T G+ K G +
Sbjct: 747 GLLCRICKLAEAEEAFSEMIG-----QGILPDTIVYTTLVDGFCKRG------------D 789
Query: 286 VLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGME 345
+ F + IT DVL Y +IS + M
Sbjct: 790 IRAASKFFYEMHSRDITP--------DVLT---------------YTAIISGFCQIGDMV 826
Query: 346 SAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
A K+F E R L DI L++ YC+ G + A + G PNV T+ +
Sbjct: 827 EAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLI 886
Query: 406 TG 407
G
Sbjct: 887 DG 888
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
+Y VI Y G D V ++ ++ KQ LK + Y +I L + + AE+ F E
Sbjct: 706 SYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEM 765
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+ + D + L+D +C+RG + A Y+ R P+V T+ + +G+ Q
Sbjct: 766 IGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 821
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 49/266 (18%), Positives = 111/266 (41%), Gaps = 39/266 (14%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ + A ++ +M GL YNS++N ++GN ++ L+ E E
Sbjct: 882 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 941
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
G++ D T++ L+ A + + + +I+ M +G+ + +G+ G+
Sbjct: 942 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLG-KGLQPTIVTFNVLMNGFCLHGM- 999
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
L E L+ ++++ + A N +N C+
Sbjct: 1000 ------LEDGEKLL---------NWMLAKGIA---------------PNATTFN----CL 1025
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
+ + +++A I+++ SR + D + +L+ +C + +A L + + +G
Sbjct: 1026 VKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGF 1085
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEA 420
+V T+ ++ G+ + +K VEA
Sbjct: 1086 SVSVSTYSVLIKGFFKR---KKFVEA 1108
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 124/271 (45%), Gaps = 9/271 (3%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y L+ Y+ + E+AE + +M +G+ Y S++N + GN K+ L E
Sbjct: 263 TTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDE 322
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M E+ + + YT+ L++ A + + + +V M++ +GV ++ ++ T GY K G
Sbjct: 323 MTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQS-KGVDVNRVIFNTLMDGYCKKG 381
Query: 273 LSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN- 328
+ D+AL + + +M F + + + + + +++ R+ ++ N
Sbjct: 382 MIDEAL----RLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNV 437
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+ +I K A ++F+ E + + N I+ YC++G + +A LI +
Sbjct: 438 VSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINE 497
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
Q RG P+ T+ + G + ++ +E
Sbjct: 498 MQERGLMPDTYTYTSLIDGERASGNVDRALE 528
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 137/300 (45%), Gaps = 18/300 (6%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
++QM D G+ + + ++++ + G + +LM E+ KG T++ LL+
Sbjct: 179 FLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYI 238
Query: 234 AASDGEGIDKIVAMMEADRGVVLDW--TVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
D G+++I+++ME + V+D+ T Y Y ++ ++A + + M+
Sbjct: 239 EIKDVGGVNEILSLMEKN---VVDYNVTTYTMLIEWYSRSSKIEEAEKLFDE----MLKK 291
Query: 292 KFSR---AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESA 347
Y +I GN ++ + V N Y +I+ K M++A
Sbjct: 292 GIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAA 351
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
E + + +S+ + + I N L+D YC++G++ +A L Q +G E + T ++A+G
Sbjct: 352 EMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASG 411
Query: 408 YLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGK 467
+ ++N+ E EA + L + E G P+ + + Y KE++ A K++ K
Sbjct: 412 FCRSNRRE---EAKRLLLTMEERGV--APNVVSFSILIDIYCKEQNFAEARRLFKVMEKK 466
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 76 EEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA--IRLDLIAKVQ 133
++G +D II F R A ++ + M ++ + P V+ I +D+ K Q
Sbjct: 395 QKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERG---VAPNVVSFSILIDIYCKEQ 451
Query: 134 GIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYN 191
+A F + +K K PSV Y A + Y E+A ++ +M++RGL+ T Y
Sbjct: 452 NFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYT 511
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
S+++ +GN + L +EM + G++ + T+++++S + + K+ M +
Sbjct: 512 SLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKE 571
Query: 252 RGVVLDWTVYATAASGYVKAG 272
G+V D +Y++ + K G
Sbjct: 572 -GIVPDDGIYSSLIASLHKVG 591
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 124/271 (45%), Gaps = 9/271 (3%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y L+ Y+ + E+AE + +M +G+ Y S++N + GN K+ L E
Sbjct: 259 TTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDE 318
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M E+ + + YT+ L++ A + + + +V M++ +GV ++ ++ T GY K G
Sbjct: 319 MTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQS-KGVDVNRVIFNTLMDGYCKKG 377
Query: 273 LSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN- 328
+ D+AL + + +M F + + + + + +++ R+ ++ N
Sbjct: 378 MIDEAL----RLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNV 433
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+ +I K A ++F+ E + + N I+ YC++G + +A LI +
Sbjct: 434 VSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINE 493
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
Q RG P+ T+ + G + ++ +E
Sbjct: 494 MQERGLMPDTYTYTSLIDGERASGNVDRALE 524
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 137/300 (45%), Gaps = 18/300 (6%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
++QM D G+ + + ++++ + G + +LM E+ KG T++ LL+
Sbjct: 175 FLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYI 234
Query: 234 AASDGEGIDKIVAMMEADRGVVLDW--TVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
D G+++I+++ME + V+D+ T Y Y ++ ++A + + M+
Sbjct: 235 EIKDVGGVNEILSLMEKN---VVDYNVTTYTMLIEWYSRSSKIEEAEKLFDE----MLKK 287
Query: 292 KFSR---AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESA 347
Y +I GN ++ + V N Y +I+ K M++A
Sbjct: 288 GIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAA 347
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
E + + +S+ + + I N L+D YC++G++ +A L Q +G E + T ++A+G
Sbjct: 348 EMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASG 407
Query: 408 YLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGK 467
+ ++N+ E EA + L + E G P+ + + Y KE++ A K++ K
Sbjct: 408 FCRSNRRE---EAKRLLLTMEERGV--APNVVSFSILIDIYCKEQNFAEARRLFKVMEKK 462
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 76 EEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA--IRLDLIAKVQ 133
++G +D II F R A ++ + M ++ + P V+ I +D+ K Q
Sbjct: 391 QKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERG---VAPNVVSFSILIDIYCKEQ 447
Query: 134 GIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYN 191
+A F + +K K PSV Y A + Y E+A ++ +M++RGL+ T Y
Sbjct: 448 NFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYT 507
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
S+++ +GN + L +EM + G++ + T+++++S + + K+ M +
Sbjct: 508 SLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKE 567
Query: 252 RGVVLDWTVYATAASGYVKAG 272
G+V D +Y++ + K G
Sbjct: 568 -GIVPDDGIYSSLIASLHKVG 587
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 15/264 (5%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
AL+N Y S + A + +R R + + + +M+ + G +K L +M+
Sbjct: 627 ALINMYIRCGSLQDAYEVFHSLRHRNV----MSWTAMIGGFADQGEDRKAFELFWQMQND 682
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
G K TFS +L AC +++ + K++A + + G LD V S Y K+G
Sbjct: 683 GFKPVKSTFSSILKACMSSACLDEGKKVIAHI-LNSGYELDTGVGNALISAYSKSGSMTD 741
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVI 335
A V K M N+ +++ +I YA G L+ + ++ V N+ ++ ++
Sbjct: 742 ARKVFDK-----MPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSIL 796
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
++ F +E +++ E R + D+R+ LI Y + G L +A+ + TE
Sbjct: 797 NACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNF----TE 852
Query: 396 PNVRTWYLMATGYLQNNQSEKGVE 419
NV TW M Y Q+ + K ++
Sbjct: 853 KNVVTWNAMINAYAQHGLASKALD 876
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 118/277 (42%), Gaps = 18/277 (6%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
AL+N Y S +A+ + + R R + I +NSM+ + Q G+Y+ L EM+++
Sbjct: 526 ALMNMYRRCGSIMEAQNVFEGTRARDI----ISWNSMIAGHAQHGSYEAAYKLFLEMKKE 581
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
G++ DK TF+ +L C E + + + M+ + G+ LD + + Y++ G
Sbjct: 582 GLEPDKITFASVLVGCKNPEALE-LGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQD 640
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV-WKRYKQNLKVYNRGYICVI 335
A V + ++ ++ +I +A G + W+ K + ++
Sbjct: 641 AYEVFHS-----LRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSIL 695
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
+ + ++ +K+ + D + N LI AY + G + A + K R
Sbjct: 696 KACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNR--- 752
Query: 396 PNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGT 432
++ +W M GY QN G A++ A + E G
Sbjct: 753 -DIMSWNKMIAGYAQNGL---GGTALQFAYQMQEQGV 785
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 120/278 (43%), Gaps = 30/278 (10%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P V +LLN Y + A + + R +V YN+M+ +Y Q ++ L
Sbjct: 218 PRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVV----SYNTMLGLYAQKAYVEECIGLFG 273
Query: 212 EMEEKGIDCDKYTFSILLSACAAAS---DGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+M +GI DK T+ LL A S +G+ I K+ + G+ D V A+ +
Sbjct: 274 QMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLA----VNEGLNSDIRVGTALATMF 329
Query: 269 VKAG---LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK 325
V+ G + +AL +V++ Y+ +I A G+ ++ + + + +
Sbjct: 330 VRCGDVAGAKQALEAFADRDVVV--------YNALIAALAQHGHYEEAFEQYYQMRSDGV 381
Query: 326 VYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
V NR Y+ V+++ + + E I D++I N LI Y R G L +A
Sbjct: 382 VMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARE 441
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
L R ++ +W + GY + + ++G EAMK
Sbjct: 442 LFNTMPKR----DLISWNAIIAGYAR--REDRG-EAMK 472
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 15/247 (6%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
AL++AY+ + S A + +M +R + + +N M+ Y Q G ++M+E+
Sbjct: 728 ALISAYSKSGSMTDARKVFDKMPNRDI----MSWNKMIAGYAQNGLGGTALQFAYQMQEQ 783
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
G+ +K++F +L+AC++ S E ++ A + R + D V A S Y K G ++
Sbjct: 784 GVVLNKFSFVSILNACSSFSALEEGKRVHAEI-VKRKMQGDVRVGAALISMYAKCGSLEE 842
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYICVI 335
A V K ++ +I YA G L + K+ +K + ++
Sbjct: 843 AQEVFDN-----FTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSIL 897
Query: 336 SSLLKFDGMESAEKIFEEWESRN-LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
S+ + +IF ES++ L I L+ R G +AETLI +
Sbjct: 898 SACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPF--- 954
Query: 395 EPNVRTW 401
P+ W
Sbjct: 955 PPDAAVW 961
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 152 PSVYIA--LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P ++++ L+N Y +S A + +M R + I +NS+++ Y Q G KK L
Sbjct: 115 PDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDV----ISWNSLISCYAQQGFKKKAFQL 170
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI 244
EM+ G K T+ +L+AC + ++ E KI
Sbjct: 171 FEEMQTAGFIPSKITYISILTACCSPAELEYGKKI 205
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 120/309 (38%), Gaps = 62/309 (20%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH- 211
+ Y+++LNA + +K+ E+I + + G NS++++Y + G+ + L +
Sbjct: 386 TTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNT 445
Query: 212 ------------------------------EMEEKGIDCDKYTFSILLSAC---AAASDG 238
+M+ +G+ + TF LLSAC +A SDG
Sbjct: 446 MPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDG 505
Query: 239 EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF--SRA 296
+ I + D ++G++ L + R ++ N F +RA
Sbjct: 506 KMIHE-------------DILRSGIKSNGHLANALMN---MYRRCGSIMEAQNVFEGTRA 549
Query: 297 YDFV-----ITQYAACGNKDDVLRVW-KRYKQNLKVYNRGYICVISSLLKFDGMESAEKI 350
D + I +A G+ + +++ + K+ L+ + V+ + +E +I
Sbjct: 550 RDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQI 609
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
L D+ + N LI+ Y R G L A + + + R NV +W M G+
Sbjct: 610 HMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHR----NVMSWTAMIGGFAD 665
Query: 411 NNQSEKGVE 419
+ K E
Sbjct: 666 QGEDRKAFE 674
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 161/384 (41%), Gaps = 54/384 (14%)
Query: 88 IIIKKFRLYKRFSHALQISMWMTK-KSNFVLTPADVAI---RLDLIAKV----QG---IE 136
I+I ++R AL++ M +SN L DV +D + KV +G +E
Sbjct: 345 ILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVE 404
Query: 137 QAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNV 196
+ S C+P + Y L++ Y A E A + QM G+ + N++++
Sbjct: 405 RMRSQPRCMPNTV----TYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDG 460
Query: 197 YYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVV 255
+ G +EM+ KG+ + T++ L+ A C + + ++ M+EA G
Sbjct: 461 MCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEA--GCS 518
Query: 256 LDWTVYATAASGYVKAGLSDKALAVLRKSE------------VLM----MHNKFSRAYDF 299
D VY T SG +AG D+A VL K + VL+ NK AY+
Sbjct: 519 PDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEM 578
Query: 300 V------------------ITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLK 340
+ I+ ++ G+ R+ K+ K+ L Y +I +
Sbjct: 579 LKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCL 638
Query: 341 FDGMESAEKIFEEWESRN-LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVR 399
++ A KIF + S + + + I N LI++ CR+ + A +L+ +++G +PN
Sbjct: 639 NGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTN 698
Query: 400 TWYLMATGYLQNNQSEKGVEAMKK 423
T+ M G + N K E M +
Sbjct: 699 TFNAMFKGLQEKNWLSKAFELMDR 722
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 114/284 (40%), Gaps = 42/284 (14%)
Query: 153 SVYIALLNAYAC-AKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
S+++ L + C + ++A ++ + G V + N+++ + +K++++L+
Sbjct: 270 SIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLA 329
Query: 212 EMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVL---DWTVYATAASG 267
EM+E I + TF IL++ C E ++ M + L D Y T G
Sbjct: 330 EMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDG 389
Query: 268 YVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
K G ++ L ++ + +R R N Y
Sbjct: 390 LCKVGRQEEGLGLVER------------------------------MRSQPRCMPNTVTY 419
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
N C+I K +E+A ++F++ + ++ N L+D C+ G ++ A
Sbjct: 420 N----CLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFN 475
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAG 431
+ Q +G + N T+ + + N EK +E + +LEAG
Sbjct: 476 EMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDE---MLEAG 516
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 148/354 (41%), Gaps = 46/354 (12%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
L ML G+ ++ + D E G ++ + I+I + K+ A I M K
Sbjct: 413 LIDMLCKAGEV-EAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHK 471
Query: 113 SNFVLTPADVAI--RLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSA 168
+ +P +V +D + K ++ A + + + K+P+ VY +L+ ++
Sbjct: 472 ---ICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRK 528
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
E I ++M RG N+ M+ ++ G K +L E++ +G D ++SIL
Sbjct: 529 EDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSIL 588
Query: 229 LSACAAASDG-EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
+ A E + AM E +G VLD Y T G+ K+G +KA +L +
Sbjct: 589 IHGLVKAGFARETYELFYAMKE--QGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEE---- 642
Query: 288 MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESA 347
M K G + V+ Y VI L K D ++ A
Sbjct: 643 -MKTK---------------GRQPTVVT---------------YGSVIDGLAKIDRLDEA 671
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+FEE +S L ++ I + LID + + G + +A ++ + +G PNV TW
Sbjct: 672 YMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 725
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 136/325 (41%), Gaps = 19/325 (5%)
Query: 117 LTPADVAIR--LDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAE 172
L P DV + ++ K +++A F + + +P Y ++ Y A ++A
Sbjct: 299 LLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAY 358
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
++++ + RG + I YN ++ + G + EM++ + T+++L+
Sbjct: 359 SLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAP-NLSTYNVLIDML 417
Query: 233 AAASDGEGIDKIV-AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
A + E K+ AM EA G+ + KA D+A ++ M H
Sbjct: 418 CKAGEVEAAFKVRDAMKEA--GLFPNVMTVNIMIDRLCKAKKLDEACSIFEG----MNHK 471
Query: 292 KFSR---AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESA 347
S + +I G DD R++++ + K+ N Y +I S K E
Sbjct: 472 ICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDG 531
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
KIF+E R D+R+ N +D + G K L + + RG P+V ++ ++ G
Sbjct: 532 HKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHG 591
Query: 408 YLQNNQSEKGVE---AMKKALVLLE 429
++ + + E AMK+ +L+
Sbjct: 592 LVKAGFARETYELFYAMKEQGCVLD 616
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 109/258 (42%), Gaps = 10/258 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++ ++ +A + A ++ +M+ L + YN ++ + + G HE+
Sbjct: 235 LFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEI 294
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ G+ D T++ ++ + + +I ME +R V + Y T GY AG
Sbjct: 295 KSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYA-YNTMIMGYGSAGK 353
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ----NLKVYNR 329
D+A ++L + + AY+ ++T G + LR ++ K+ NL YN
Sbjct: 354 FDEAYSLLERQKARGCIPSVI-AYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYN- 411
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
+I L K +E+A K+ + + L ++ N +ID C+ L +A ++
Sbjct: 412 ---VLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGM 468
Query: 390 QLRGTEPNVRTWYLMATG 407
+ P+ T+ + G
Sbjct: 469 NHKICSPDEVTFCSLIDG 486
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 110/256 (42%), Gaps = 10/256 (3%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y L+ A + + ++ + QM++ G + +++ V+ + G SL+ E
Sbjct: 199 SAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDE 258
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M+ + D +++ + A + K +++ G++ D Y + K
Sbjct: 259 MKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKS-HGLLPDDVTYTSMIGVLCKGN 317
Query: 273 LSDKALAVLRKSEVLMMHNK---FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
D+A+ + + E N+ + AY+ +I Y + G D+ + +R K + +
Sbjct: 318 RLDEAVEIFEQME----QNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSV 373
Query: 330 -GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y C+++ L K + A + FEE + ++ ++ N LID C+ G + A +
Sbjct: 374 IAYNCILTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDA 432
Query: 389 AQLRGTEPNVRTWYLM 404
+ G PNV T +M
Sbjct: 433 MKEAGLFPNVMTVNIM 448
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 128/303 (42%), Gaps = 14/303 (4%)
Query: 107 MWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYAC 164
+ K+ VL +D K + +A + K + P+V Y ++++ A
Sbjct: 605 FYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAK 664
Query: 165 AKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYT 224
++A ++ ++ + GL + Y+S+++ + + G + +M E+ +KG+ + YT
Sbjct: 665 IDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 724
Query: 225 FSILLSACAAASDGEGIDKIVAMMEADRGV--VLDWTVYATAASGYVKAGLSDKALAVLR 282
++ LL A A E I++ + + + + + Y+ +G + +KA +
Sbjct: 725 WNCLLDALVKA---EEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQ 781
Query: 283 KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-YICVISSLLKF 341
+ + + + Y +I A GN + +++R+K N V + Y +I L
Sbjct: 782 EMQKQGLKPN-TITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYS 840
Query: 342 DGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR---GTEPNV 398
A KIFEE + + L+DA + L +A I A LR ++
Sbjct: 841 RRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAA--IVGAVLREIAKSQHAA 898
Query: 399 RTW 401
R+W
Sbjct: 899 RSW 901
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 143/355 (40%), Gaps = 41/355 (11%)
Query: 68 VPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLD 127
V L + V+ G P D+ I+ F + + A ++ M + N + I +D
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGR-NVMPDTVTFNILVD 314
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+ K + +A + EK P+ Y AL++ Y ++A ++ M +G
Sbjct: 315 GLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAP 374
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKI 244
YN ++N Y ++ + L+ EM EK + D T+S L+ C E ++
Sbjct: 375 NLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLF 434
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
M + G++ D Y+ G+ K G D+AL +L++ MH
Sbjct: 435 KEMCSS--GLLPDLMAYSILLDGFCKHGHLDEALKLLKE-----MHE------------- 474
Query: 305 AACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
+R K N+ +Y +I + +E A+++F + + + DI
Sbjct: 475 -------------RRIKPNIILYT----ILIRGMFIAGKLEVAKELFSKLSADGIRPDIW 517
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
N +I + GL +A K + G P+ ++ ++ G+LQN S ++
Sbjct: 518 TYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQ 572
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 117/279 (41%), Gaps = 13/279 (4%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y ++++ + +A + +M DRG+ + YN++++ + G + L
Sbjct: 234 PNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRL 293
Query: 210 MHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
EM + + D TF+IL+ C E + V+ ++G + Y GY
Sbjct: 294 FKEMVGRNVMPDTVTFNILVDGLCKEGMVSEA--RCVSETMTEKGAEPNAYTYNALMDGY 351
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFS---RAYDFVITQYAACGNKDDVLRVWKRY-KQNL 324
D+A+ VL +M+ + +Y+ +I Y ++ R+ ++NL
Sbjct: 352 CLHNQMDEAIKVLG----IMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNL 407
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
Y ++ L + A +F+E S L D+ + L+D +C+ G L +A
Sbjct: 408 TPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALK 467
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
L+ + R +PN+ + ++ G + E E K
Sbjct: 468 LLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSK 506
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 120/299 (40%), Gaps = 19/299 (6%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
I++A FN + P+V Y ++N + A + ++M + YN+
Sbjct: 182 IKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNT 241
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEAD 251
+++ + + + EM ++GI D T++ +L C+ E M+
Sbjct: 242 IIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMV--G 299
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF--VITQYAACGN 309
R V+ D + G K G+ +A V SE + AY + ++ Y
Sbjct: 300 RNVMPDTVTFNILVDGLCKEGMVSEARCV---SETMTEKGAEPNAYTYNALMDGYCLHNQ 356
Query: 310 KDDVLRVW-----KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
D+ ++V K NL YN +I+ K M A+++ E +NL D
Sbjct: 357 MDEAIKVLGIMIGKGCAPNLSSYN----ILINGYCKSKRMNEAKRLLSEMSEKNLTPDTV 412
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ L+ C+ G +A L + G P++ + ++ G+ ++ ++ ++ +K+
Sbjct: 413 TYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKE 471
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 128/291 (43%), Gaps = 11/291 (3%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I ++ + K +E+ ++ + V EK P + Y L++AY+ E+A +M M +
Sbjct: 240 IMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGK 299
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILLSACAAASDGEG 240
G YN+++N + G Y++ + EM G+ D T+ S+L+ AC E
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE- 358
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR--KSEVLMMHNKFSRAYD 298
+K+ + M + R VV D +++ S + ++G DKAL K L+ N Y
Sbjct: 359 TEKVFSDMRS-RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI---YT 414
Query: 299 FVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
+I Y G + + +Q + Y ++ L K + A+K+F E R
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
L D LID +C+ G L A L K + + +V T+ + G+
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 135/334 (40%), Gaps = 49/334 (14%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+ L + +++A YFN V E +P +Y L+ Y A + +M +G
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ YN++++ + + D L +EM E+ + D YT +IL+ + + +
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV---LRKSEVLMMHNKFSRAYDFV 300
+ M+ R + LD Y T G+ K G D A + + E+L +Y +
Sbjct: 502 LFQKMKEKR-IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL----PTPISYSIL 556
Query: 301 ITQYAACGNKDDVLRVW-----KRYKQNLKVYN---RGYI-------------------- 332
+ + G+ + RVW K K + + N +GY
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 333 ---CV-----ISSLLKFDGMESAEKIFE--EWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
C+ I ++ + M A + + E E L D+ N ++ +CR+ + +A
Sbjct: 617 VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA 676
Query: 383 ETLIYKAQLRGTEPNVRTWYLMATGYL-QNNQSE 415
E ++ K RG P+ T+ M G++ Q+N +E
Sbjct: 677 EVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 120/271 (44%), Gaps = 16/271 (5%)
Query: 163 ACAKS-AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCD 221
AC K + E + MR R +V + ++SMM+++ ++GN K + ++E G+ D
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 222 KYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK---AGLSDKA 277
++IL+ C ++ M++ +G +D Y T G K G +DK
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQ--QGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 278 LAVLRKSEVLMMHNKFSRAYDFVITQYAAC--GNKDDVLRVWKRYKQN-LKVYNRGYICV 334
+ + + F +Y I C GN + + ++++ K+ +++ Y +
Sbjct: 468 FNEMTERAL------FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
+ K +++A++I+ + S+ + + L++A C +G L +A + + +
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
+P V M GY ++ + G ++K +
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 112/285 (39%), Gaps = 36/285 (12%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ Q++ G+ N M+N + G +K+ + + +++EKG+ D T++ L+SA +
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL------------ 281
+ E +++ M +G Y T +G K G ++A V
Sbjct: 282 SKGLMEEAFELMNAMPG-KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 282 -----------RKSEVLMMHNKFS--RAYDFV---------ITQYAACGNKDDVLRVWKR 319
+K +V+ FS R+ D V ++ + GN D L +
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 320 YKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
K+ L N Y +I + + A + E + D+ N ++ C+R +
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
L +A+ L + R P+ T ++ G+ + + +E +K
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 72/155 (46%), Gaps = 27/155 (17%)
Query: 302 TQYAACGNKDDVLRVWKR-YKQNLKVY----------NRGYI-------CVISSLLKFDG 343
+ ++ CG+ D V + R Y Q K+ ++G+ +I SL++
Sbjct: 156 STFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGW 215
Query: 344 MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYL 403
+E A +++E + ++ N +++A C+ G + K T + + Q +G P++ T+
Sbjct: 216 VELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNT 275
Query: 404 MATGYLQNNQSEKGVEAMKKALVLLEA--GTRWKP 436
+ + Y S KG+ M++A L+ A G + P
Sbjct: 276 LISAY-----SSKGL--MEEAFELMNAMPGKGFSP 303
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 152/340 (44%), Gaps = 16/340 (4%)
Query: 77 EGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIA--KVQG 134
EG + ++I++F AL+ + K + LTP+ + + K Q
Sbjct: 367 EGPSPNSVTFSVLIERFSKNGEMEKALE---FYKKMESLGLTPSVFHVHTIIQGWLKGQK 423
Query: 135 IEQAASYFNCVPEKLKLPSVYIA-LLNAYACAKSA-EKAEIIMQQMRDRGLVKKTIDYNS 192
E+A F+ E L +V+I + ++ C + +KA ++++M RG+ + YN+
Sbjct: 424 HEEALKLFDESFET-GLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNN 482
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+M + + N ++ M EKG+ + YT+SIL+ C D + + ++V M +
Sbjct: 483 VMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSN 542
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGN 309
+ ++ VY T +G K G + KA +L ++ +F +Y+ +I + G
Sbjct: 543 -IEVNGVVYQTIINGLCKVGQTSKARELLAN---MIEEKRFCVSCMSYNSIIDGFIKEGE 598
Query: 310 KDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
D + ++ N N Y ++ L K + M+ A ++ +E +++ + DI
Sbjct: 599 MDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGA 658
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
LI +C++ + A L + G P+ + + +G+
Sbjct: 659 LIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGF 698
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 100/267 (37%), Gaps = 37/267 (13%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
LLNAY+ + + A I+ QM + G++ N ++ Q + + L M G
Sbjct: 168 LLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIG 227
Query: 218 IDCDKYTFSILLSACA-AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
+D D T +L+ A E ++ +E RG D +Y+ A K
Sbjct: 228 VDGDNGTTQLLMRASLREEKPAEALEVFSRAIE--RGAEPDSLLYSLAVQACCKTLNLAM 285
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVIS 336
A ++LR+ + + Y VI GN +D +R WK
Sbjct: 286 ANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIR-WK------------------ 326
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
+E S + ++ LI +C+ L A L YK + G P
Sbjct: 327 ---------------DEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSP 371
Query: 397 NVRTWYLMATGYLQNNQSEKGVEAMKK 423
N T+ ++ + +N + EK +E KK
Sbjct: 372 NSVTFSVLIERFSKNGEMEKALEFYKK 398
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 7/171 (4%)
Query: 148 KLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLD 207
KL +P+ Y AL++ + + E A + ++ + GL YNS+++ + GN
Sbjct: 650 KLDIPA-YGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAAL 708
Query: 208 SLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
L +M + G+ CD T++ L+ + + M+A G+V D +Y +G
Sbjct: 709 DLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQA-VGLVPDEIMYTVIVNG 767
Query: 268 YVKAGLSDKALAVLRKSEVLMMHNKFSRA--YDFVITQYAACGNKDDVLRV 316
K G + + V++ E + +N Y+ VI + GN D+ R+
Sbjct: 768 LSKKG---QFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRL 815
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 23/179 (12%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKS----------- 113
+S L + +EEG +I FR AL + M K
Sbjct: 670 ESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 729
Query: 114 -NFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
+ +L ++ + DL ++Q + VP+++ +Y ++N + K
Sbjct: 730 IDGLLKEGNLILASDLYTEMQAV-------GLVPDEI----MYTVIVNGLSKKGQFVKVV 778
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
+ ++M+ + + YN+++ +Y+ GN + L EM +KGI D TF IL+S
Sbjct: 779 KMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 837
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 137/333 (41%), Gaps = 21/333 (6%)
Query: 132 VQG-IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
V+G E A + F + LP+ Y ++ + +KA I QM G I
Sbjct: 389 VEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVI 448
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMM 248
YN ++++Y++ G L+ M+ G+ D +T++ L+S + E + M
Sbjct: 449 TYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEM 508
Query: 249 EADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG 308
+ G+ + Y +GY+ D ALA+ K V + S Y+ +I+ ++
Sbjct: 509 -VEHGISPNVVTYNAIINGYLTVAKVDDALALFWKM-VESGNVPSSGTYNMMISGFSKTN 566
Query: 309 NKDDVLRVW-KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ K KQ L Y I L K A KIF E + R+ ++ +
Sbjct: 567 RISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYS 626
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN---QSEKGVEAMKKA 424
LID C+ G AE L+ G EPNV T+ + G ++++ VE+MKK
Sbjct: 627 SLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKK 682
Query: 425 LVLLEAGTRWKPSKECLAACLGYYKKERDIEGA 457
+PS+E A L K ++E A
Sbjct: 683 --------GLQPSEEIYRALLVGQCKNLEVESA 707
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 113/266 (42%), Gaps = 11/266 (4%)
Query: 164 CAKS-AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDK 222
C K ++AE+IM + G T Y S++ + + GN + M + G D +
Sbjct: 213 CNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNS 272
Query: 223 YTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL 281
T+S L++ C+ E +D + M+ D+G+ Y AG S +A+ +L
Sbjct: 273 VTYSALINGLCSEGRLEEAMDMLEEMI--DKGIEPTVHAYTIPIVSLCDAGRSCEAVKLL 330
Query: 282 RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-KRYKQNLKVYNRGYICVISSLLK 340
K + + Y +I+ + G + + V+ K L Y +I+ L
Sbjct: 331 GKMKKRGCGPNV-QTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYV 389
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR-GTEPNVR 399
E+A IFE S + + N +I +C G + KA T I+ L+ G PNV
Sbjct: 390 EGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKA-TAIFDQMLKAGPSPNVI 448
Query: 400 TWYLMATGYLQN---NQSEKGVEAMK 422
T+ ++ Y + N + + +E MK
Sbjct: 449 TYNIIIHIYFKQGYMNNAMRLLEMMK 474
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 106/263 (40%), Gaps = 15/263 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y AL+N E+A ++++M D+G+ Y + G + L+ +M
Sbjct: 274 TYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKM 333
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+++G + T++ L+S + E + M AD G+V Y+ + G
Sbjct: 334 KKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLAD-GLVPTAVTYSALINQLYVEGR 392
Query: 274 SDKALAVLRKSEVLMMHNKF--SRAYDFVITQYAACGNKDDVLRVWKRY-----KQNLKV 326
+ AL + E ++ H+ + Y+ +I + + G ++ + N+
Sbjct: 393 FETALTIF---EWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVIT 449
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
YN +I K M +A ++ E + L D +LI + R G L A +L
Sbjct: 450 YN----IIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLF 505
Query: 387 YKAQLRGTEPNVRTWYLMATGYL 409
+ G PNV T+ + GYL
Sbjct: 506 NEMVEHGISPNVVTYNAIINGYL 528
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 67/356 (18%), Positives = 142/356 (39%), Gaps = 12/356 (3%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+ DQ ++ G ++ III + ++A+++ + M K + L A +
Sbjct: 434 IFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRL-LEMMKGNGLKLDTWTYANLISGF 492
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
++ +E A S FN + E P+V Y A++N Y + A + +M + G V +
Sbjct: 493 SRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSS 552
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
YN M++ + +T + ++ +M ++G+ + T++ + KI
Sbjct: 553 GTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHE 612
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS--EVLMMHNKFSRAYDFVITQYA 305
M+ R + Y++ G + G ++ A +L + + R +
Sbjct: 613 MKK-RDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPNVDTYTTLVRG----LCGKG 667
Query: 306 ACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
C D ++ K K+ L+ Y ++ K +ESA KIF+ + +
Sbjct: 668 RCYEADQLVESMK--KKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSD 725
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
LI A C+ KA+ + + + W ++ G L+ +++ +E +
Sbjct: 726 YKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELL 781
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 123/291 (42%), Gaps = 10/291 (3%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K ++QA F + K +P+V Y L++ A + A ++M +M
Sbjct: 234 LCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPAD 293
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
T+ YN++++ Y + G ++ L EM K D+ T++ L+ AS E ++
Sbjct: 294 TVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLE 353
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA--YDFVITQY 304
M+ G+ D Y+ +GY +A +A +++ ++ N A Y +I
Sbjct: 354 NMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQE---MIARNVAPNAVTYSSLIDGL 410
Query: 305 AACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
G + + V K + V Y VI L D E A + EE ++ + +
Sbjct: 411 CKAGRVNHAMEVLKNVDKPDVVT---YTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVG 467
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
N +I A CR G + +A L+ G EP + T+ + G+ + + E
Sbjct: 468 TFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRME 518
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 144/353 (40%), Gaps = 51/353 (14%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDR-GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y ++N + ++A I+++M R G+ + Y S+++ + G + ++ EM
Sbjct: 48 YSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREM 107
Query: 214 EEKGIDCDKYTFS---------------------ILLSAC---AAASD------------ 237
+ KG++ DK+TFS IL S+C A +S
Sbjct: 108 KLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRI 167
Query: 238 GEGIDKIVAM-MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL-MMHNKFSR 295
GE + M M D D Y G+ K+G +KA+ +L E + N +
Sbjct: 168 GEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVT- 226
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEW 354
Y ++ G+ D L +++R V N Y +I L +++A + +E
Sbjct: 227 -YSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEM 285
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
+ D N L+D YCR G + +A+ L + + P+ T+ + G+ ++
Sbjct: 286 TATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRL 345
Query: 415 EKG---VEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
E+ +E MK A AG + GY + +R +E A++ +++
Sbjct: 346 EEARFLLENMKTA-----AGIDPDVVTYSIVV-AGYSRAKRFVEAAEFIQEMI 392
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 102/250 (40%), Gaps = 7/250 (2%)
Query: 177 QMRDRGLVKK-TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAA 234
+MR+ G K + Y ++++ + ++GN +K ++ ME + + T+S LL C A
Sbjct: 178 EMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKA 237
Query: 235 ASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
+ +D M +G V + Y T G A D A ++ + +
Sbjct: 238 GDLDQALDLFRRM--TSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPAD-T 294
Query: 295 RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEE 353
+Y+ ++ Y G ++ +++K + +R Y C++ +E A + E
Sbjct: 295 VSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLEN 354
Query: 354 WES-RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
++ + D+ + ++ Y R +A I + R PN T+ + G +
Sbjct: 355 MKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 414
Query: 413 QSEKGVEAMK 422
+ +E +K
Sbjct: 415 RVNHAMEVLK 424
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 86/220 (39%), Gaps = 39/220 (17%)
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-----------------SE 285
+++ M + V D Y+T +G+ K G D+A +LR+ +
Sbjct: 30 EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVD 89
Query: 286 VLMMHNKFSRAYDFV------------------ITQYAACGNKDDVLRVWKR-YKQNLKV 326
L K RA + V IT + D+ L+++K + ++
Sbjct: 90 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRL 149
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLC---HDIRIPNHLIDAYCRRGLLHKAE 383
+I+ L + + A ++F+E E R D+ LID +C+ G L KA
Sbjct: 150 DAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAM 209
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
++ + R PNV T+ + G + ++ ++ ++
Sbjct: 210 KMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 249
>gi|168052517|ref|XP_001778696.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669911|gb|EDQ56489.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 799
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 113/270 (41%), Gaps = 36/270 (13%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +LLNA+ A EKA+ + M+ R + +N +M+ Y G Y++ L+H+M
Sbjct: 338 YSSLLNAFGKAGYPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYERARELLHDMA 397
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
E I+ + T L +ACA A E + + + R + L+ + A + Y++AG
Sbjct: 398 EARIEPNVVTICSLFAACARARCPEKVRDVFHEAKV-RQIALNVPAFNAAITAYIEAGQF 456
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
D+A A+L E +QNL+ ++ +
Sbjct: 457 DEAKALLEVME-----------------------------------EQNLRPNGVTFLLL 481
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I++ A ++++ + + + LI+A+ + G+ ++A T+ + G
Sbjct: 482 INAAGSLGDYREARTLYDKMVDLGIPLTVEPCSALINAFAKHGMYNEARTIFDDMRKAGC 541
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
+ NV T+ + Y + ++ E M A
Sbjct: 542 KANVVTYTSLMIAYRMYDDAQLACEEMVAA 571
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 104/252 (41%), Gaps = 8/252 (3%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y L+NA + KA I ++M D G+ + YN +++ + G + +
Sbjct: 160 SSYNNLINACGSSGQWFKALEICKRMTDNGVGPDLMTYNIILSAFKSGGQPRHAVAYYDH 219
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ K + D+Y+ +I+L+ E + M G D + Y G
Sbjct: 220 LISKKVPLDRYSHNIILNCLTKLGRFEDAINLFKEMRKMNGCEPDVVTFNALLHVYALCG 279
Query: 273 LSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWK-RYKQNLKVYN 328
KA +++ +M+ + ++ ++ YA+ G + L+V K +
Sbjct: 280 QITKA----QETFDMMIGEGMAPTIVTFNTLLGAYASQGMYTEALQVVGLLVKAKFEPDV 335
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y ++++ K E A+++F+ + R+ ++ N L+DAY G +A L++
Sbjct: 336 VSYSSLLNAFGKAGYPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYERARELLHD 395
Query: 389 AQLRGTEPNVRT 400
EPNV T
Sbjct: 396 MAEARIEPNVVT 407
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 99/258 (38%), Gaps = 39/258 (15%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y ++ +A + A++A + +M+ YN++MNV+ + G ++ + +M
Sbjct: 89 IYNCMIWLHARHQRADQARGLFYEMKVWRCKPDVETYNALMNVHGRAGQWRWALQIFDDM 148
Query: 214 EE--KGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
+ K I + +++ L++AC ++ +I M D GV D Y S +
Sbjct: 149 LQAPKPIAPSRSSYNNLINACGSSGQWFKALEICKRM-TDNGVGPDLMTYNIILSAFKSG 207
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
G A+A YD +I++ RY N+
Sbjct: 208 GQPRHAVAY----------------YDHLISKKVPL----------DRYSHNI------- 234
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCH-DIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
+++ L K E A +F+E N C D+ N L+ Y G + KA+
Sbjct: 235 --ILNCLTKLGRFEDAINLFKEMRKMNGCEPDVVTFNALLHVYALCGQITKAQETFDMMI 292
Query: 391 LRGTEPNVRTWYLMATGY 408
G P + T+ + Y
Sbjct: 293 GEGMAPTIVTFNTLLGAY 310
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 133/308 (43%), Gaps = 13/308 (4%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
L+++ K + A F + + P+V + ++N Y A + KAE + Q MR
Sbjct: 178 LEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALC 237
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
Y +++N + + GN + + + E++ G D YT++ LL A + G +
Sbjct: 238 PPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKE 297
Query: 244 IV-AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
+ M+EA GV D Y + +AGL A A+ + + +++ +++
Sbjct: 298 VFETMLEA--GVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTM-KSHILLLS 354
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDG----MESAEKIFEEWESRN 358
+ G D +R +++ V ++ +SLL G M+ E ++E +
Sbjct: 355 AFVKAGRVTDAENFVRRL-ESMGVEPDTFM--FNSLLGAYGNSGRMDKMESLYESMQGSV 411
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
DI N LI+ Y + G + +AE + + +G P+V +W + Y + K V
Sbjct: 412 CKPDIITLNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRKCV 471
Query: 419 EAMKKALV 426
+K L+
Sbjct: 472 SVYQKMLI 479
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 140/312 (44%), Gaps = 22/312 (7%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+++ K +A F + + L PS+ Y AL+NA+A + +AE I +++ G
Sbjct: 213 INIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGF 272
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
V YN+++ Y + G+ + M E G+ D +++IL+ A A I
Sbjct: 273 VPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGL---ISD 329
Query: 244 IVAMMEADRGVVLDWTV--YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVI 301
A+ ++ + V T+ + S +VKAG A +R+ E + + + ++ ++
Sbjct: 330 AQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPD-TFMFNSLL 388
Query: 302 TQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDG----MESAEKIFEEWESR 357
Y G D + +++ + ++ + I +++L+ +E AE+IF ES+
Sbjct: 389 GAYGNSGRMDKMESLYESMQGSV---CKPDIITLNTLINVYAQGGYIERAEEIFNSLESK 445
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
D+ L+ AY +R L K ++ K + G P+ T ++ + S +G
Sbjct: 446 GFTPDVMSWTSLMGAYSKRKLYRKCVSVYQKMLIAGCIPDRATAKVLLS-------SCRG 498
Query: 418 VEAMKKALVLLE 429
E +K+ ++E
Sbjct: 499 PEQVKEVTDMIE 510
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 153/375 (40%), Gaps = 42/375 (11%)
Query: 84 EQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFN 143
E L + +FR +++ A+ I W+ + S F + +D + + +A + F+
Sbjct: 66 EDLMETVAEFRRQRKWRSAIVIYEWILQGSMFKPDVGCFNMLMDAYGRTKQWTEAENTFH 125
Query: 144 CVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
+ + LP+ + L+ AY+ E+AE ++ +M++ + YN+ + V ++G
Sbjct: 126 LMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLNKSG 185
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILL---------------------SAC-------- 232
+++ + + EM+ +G+ TF++++ + C
Sbjct: 186 SWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYT 245
Query: 233 ----AAASDGEGI--DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS-E 285
A A +G + ++I A +++ G V D Y Y + G A V E
Sbjct: 246 ALINAHAREGNCVRAEEIFAELQS-VGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLE 304
Query: 286 VLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGM 344
+ + S Y+ +I + G D ++ K+ K + +I ++S+ +K +
Sbjct: 305 AGVKADHVS--YNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRV 362
Query: 345 ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
AE ES + D + N L+ AY G + K E+L Q +P++ T +
Sbjct: 363 TDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTL 422
Query: 405 ATGYLQNNQSEKGVE 419
Y Q E+ E
Sbjct: 423 INVYAQGGYIERAEE 437
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 144 CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
C P+ + L + L+N YA E+AE I + +G + + S+M Y + Y
Sbjct: 412 CKPDIITLNT----LINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLY 467
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+K S+ +M G D+ T +LLS+C E + ++ M+E R
Sbjct: 468 RKCVSVYQKMLIAGCIPDRATAKVLLSSCRGP---EQVKEVTDMIETQR 513
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 130/293 (44%), Gaps = 10/293 (3%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+ L+ ++ + +A F+ + + LP VY L++ + A +M R +
Sbjct: 323 IGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGID 242
+ Y ++++ + Q G+ + L HEM KG++ D TF+ L++ C A +
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS-EVLMMHNKFSRAYDFVI 301
M++A G + Y T G K G D A +L + ++ + N F+ Y+ ++
Sbjct: 443 VHNHMIQA--GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT--YNSIV 498
Query: 302 TQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
GN ++ +++ ++ L Y ++ + K M+ A++I +E + L
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY-LQNN 412
I N L++ +C G+L E L+ +G PN T+ + Y ++NN
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/348 (20%), Positives = 135/348 (38%), Gaps = 64/348 (18%)
Query: 120 ADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQ 177
A I + + ++ I++A + K P V Y ++N Y +K +++
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 178 MRDRGL-----------------------------------VKKTIDYNSMMNVYYQTGN 202
M+ +GL + T+ Y ++++ + + G+
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
+ +EM + I D T++ ++S D K+ M +G+ D +
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC-KGLEPDSVTFT 425
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA--------YDFVITQYAACGNKDD-- 312
+GY KAG A V HN +A Y +I G+ D
Sbjct: 426 ELINGYCKAGHMKDAFRV---------HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 313 --VLRVWK-RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
+ +WK + N+ YN +++ L K +E A K+ E+E+ L D L
Sbjct: 477 ELLHEMWKIGLQPNIFTYNS----IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+DAYC+ G + KA+ ++ + +G +P + T+ ++ G+ + E G
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 133/324 (41%), Gaps = 52/324 (16%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ L+N Y A + A + M G + Y ++++ + G+ + L+HEM
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ G+ + +T++ +++ + + E K+V EA G+ D Y T Y K+G
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA-AGLNADTVTYTTLMDAYCKSGEM 542
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
DKA +L++ + K + + +N V
Sbjct: 543 DKAQEILKE-------------------------------MLGKGLQPTIVTFN-----V 566
Query: 335 ISSLLKFDGM-ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL-R 392
+ + GM E EK+ ++ + + N L+ YC R L KA T IYK R
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL-KAATAIYKDMCSR 625
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA--GTRWKPSKECLAACL-GYYK 449
G P+ +T+ + G+ + MK+A L + G + S + + G+ K
Sbjct: 626 GVGPDGKTYENLVKGHCKARN-------MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 450 KERDIEGADYFIKLLTGKEIISAD 473
+++ +E + F ++ +E ++AD
Sbjct: 679 RKKFLEAREVFDQM--RREGLAAD 700
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 111/260 (42%), Gaps = 19/260 (7%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFS-- 226
++A ++ M +G I Y++++N Y + G K+ L+ M+ KG+ + Y +
Sbjct: 263 KEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSI 322
Query: 227 --ILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS 284
+L C A E +++ +G++ D VY T G+ K G A +
Sbjct: 323 IGLLCRICKLAEAEEAFSEMIR-----QGILPDTVVYTTLIDGFCKRGDIRAASKFFYE- 376
Query: 285 EVLMMHNKFSR----AYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLL 339
MH++ Y +I+ + G+ + +++ + + L+ + + +I+
Sbjct: 377 ----MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 340 KFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVR 399
K M+ A ++ ++ LID C+ G L A L+++ G +PN+
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 400 TWYLMATGYLQNNQSEKGVE 419
T+ + G ++ E+ V+
Sbjct: 493 TYNSIVNGLCKSGNIEEAVK 512
>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 117/273 (42%), Gaps = 5/273 (1%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S + L++ +KA I+ M G V + YN++++ + G +K L+H
Sbjct: 176 SSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHH 235
Query: 213 MEEKGIDCDKYTFSILL-SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
ME KGI D T+++ + S C + +G +V ++ + + Y T +G+VK
Sbjct: 236 MECKGIQADVCTYNMFIDSLCRNSRSAQGY--LVLKKMRNKMITPNEVSYNTLINGFVKE 293
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
G A V + L + Y+ +I Y GN ++ LRV + N N
Sbjct: 294 GKIGVATRVFNEMIELNLSPNLI-TYNILINGYCINGNFEEALRVLDVMEANDVRPNEVT 352
Query: 332 I-CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
I +++ L K + A I E + + +ID CR GLL +A L+ +
Sbjct: 353 IGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMC 412
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G P++ T+ ++ G+ + K E M K
Sbjct: 413 KDGVHPDIITFSVLINGFCKVGNINKAKEVMSK 445
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 8/243 (3%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+AE + + GLV ++ ++ ++N Y G+ S+ M G +T+ LL
Sbjct: 508 EAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLL 567
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
+ K++ + + +D Y T K+G L +R E ++
Sbjct: 568 KVLCKGQNFWEARKLLKKLHCIP-LAVDTISYNTLIVEISKSG---NLLEAVRLFEEMIQ 623
Query: 290 HNKFSRAYDF--VITQYAACGNKDDVLRVWKRYKQN--LKVYNRGYICVISSLLKFDGME 345
+N +Y + +++ G R Q L + + Y C I L K +
Sbjct: 624 NNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSK 683
Query: 346 SAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
+A +F+E E + L D+ N + D Y R G + A +LI K + + PN+ T+ ++
Sbjct: 684 AALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILL 743
Query: 406 TGY 408
GY
Sbjct: 744 HGY 746
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 99/255 (38%), Gaps = 3/255 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N + A + +M + L I YN ++N Y GN+++ ++ ME
Sbjct: 283 YNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVME 342
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ ++ T LL+ ++ + I+ +R L+ + G + GL
Sbjct: 343 ANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINR-TSLNCISHTVMIDGLCRNGLL 401
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-KRYKQNLKVYNRGYIC 333
D+A +L + +H + +I + GN + V K Y++ N +
Sbjct: 402 DEAFQLLIEMCKDGVHPDII-TFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFST 460
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+I + K + A K + D N L+ + C G L +AE ++ G
Sbjct: 461 LIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIG 520
Query: 394 TEPNVRTWYLMATGY 408
PN T+ + GY
Sbjct: 521 LVPNSVTFDCIINGY 535
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P Y +LL ++ +A +++++ L TI YN+++ ++GN + L
Sbjct: 560 PFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFE 619
Query: 212 EMEEKGIDCDKYTFSILLSA--------CAAASDGEGIDKIVAMMEADRGVVLDWTVYAT 263
EM + I D YT++ +LS CA G + K + + L+ VY
Sbjct: 620 EMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEI--------LTLNSIVYTC 671
Query: 264 AASGYVKAGLSDKALAVLRKSE 285
G KAG S AL + ++ E
Sbjct: 672 FIDGLFKAGQSKAALYLFKEME 693
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
A++ A E+A I+Q+M + T + ++M+V+ + N+K+ +L ME
Sbjct: 916 AMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHY 975
Query: 217 GIDCDKYTFSILLSACAAASD 237
+ D +++L+SAC A D
Sbjct: 976 RVKLDIVAYNVLISACCANGD 996
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 172/414 (41%), Gaps = 55/414 (13%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
++M L+ + E G D+ ++K F KR AL++ + M S P +V
Sbjct: 147 EAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALEL-LHMMADSQGRSCPPNVVS 205
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLK---LPSV--YIALLNAYACAKSAEKAEIIMQQMR 179
+I Q +N E + P+V Y +++ A+ ++AE + QQM
Sbjct: 206 YATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMI 265
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS-ACAAASDG 238
D+G+ YN +++ Y G +K++ ++ EM G+ D YT+ LL+ C
Sbjct: 266 DKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCR 325
Query: 239 EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---R 295
E +M+ +G+ + +Y GY G AL+ + LM+ N S
Sbjct: 326 EARFFFDSMIR--KGIKPNVAIYGILIHGYATKG----ALSEMHDLLNLMVENGLSPDHH 379
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQ---NLKVYNRGYIC--------VISSLLKFDGM 344
++ + T YA D+ + ++ + KQ + V N G + V ++LKF+ M
Sbjct: 380 IFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQM 439
Query: 345 -------------------------ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
E A++ + E ++ + D+ N ++ C +G +
Sbjct: 440 MNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV 499
Query: 380 HKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTR 433
KA+ LI + GT P+V ++ + G+ + + EA K V+L G +
Sbjct: 500 MKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRID---EAAKSLDVMLSVGLK 550
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 118/308 (38%), Gaps = 20/308 (6%)
Query: 137 QAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
+A +F+ + K P+V Y L++ YA + + ++ M + GL +N +
Sbjct: 326 EARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIF 385
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRG 253
Y + + + ++M+++G+ D F L+ A C + + K MM + G
Sbjct: 386 TAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMM--NEG 443
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG--NKD 311
V + V+ + G +KA K M N+ R D V C K
Sbjct: 444 VAPNIFVFNSLVYGLCTVDKWEKA-----KEFYFEMLNQGIRP-DVVFFNTILCNLCTKG 497
Query: 312 DVLRVWKRYKQNLKVYNR----GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
V++ + +V R Y +I ++ A K + S L D N
Sbjct: 498 QVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYN 557
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVL 427
L+ YCR G + A + + G P V T+ + G + + EA + L +
Sbjct: 558 TLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLF---TTRRFSEAKELYLNM 614
Query: 428 LEAGTRWK 435
+ +G +W
Sbjct: 615 ITSGKQWN 622
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 153/359 (42%), Gaps = 46/359 (12%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKL--- 206
P+V+ ++NA KA +M+ M+ G + YN++++ Y + G K+
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKA 280
Query: 207 DSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAAS 266
D+++ EM E + + TF+IL+ + G K+ M D+ V+ + Y + +
Sbjct: 281 DAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEM-LDQDVIPNVITYNSLIN 339
Query: 267 GYVKA-------GLSDKALAVLRKSEVLMMH---NKF----------------------- 293
G G+ DK ++ + ++ H N F
Sbjct: 340 GLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRP 399
Query: 294 -SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIF 351
+R Y+ +I Y G DD + + ++ V + G Y C+I+ L + +E+A+K+F
Sbjct: 400 TTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF 459
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
++ ++ L D+ + L++ YC RG KA L+ + G +P T+ +M GY +
Sbjct: 460 DQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCK- 517
Query: 412 NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEII 470
E ++A +E R + + L Y ++ +E A+ + + K ++
Sbjct: 518 ---EGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
IE A F+ + K LP + + L+ Y + KA +++++M GL + + YN
Sbjct: 452 IEAAKKLFDQLTNK-GLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNI 510
Query: 193 MMNVYYQTGNYKKLDSLMHEME-EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
MM Y + GN K ++ +ME E+ + + ++++LL + E + ++ M +
Sbjct: 511 MMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEM-LE 569
Query: 252 RGVVLDWTVYATAASGYVKAGL 273
+G+V + Y V G
Sbjct: 570 KGLVPNRITYEIVKEEMVDKGF 591
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 143/324 (44%), Gaps = 7/324 (2%)
Query: 89 IIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEK 148
++ F YK + Q+ W+ + + F + +D K IE A FN + E
Sbjct: 74 VVVHFWNYKDWPRVTQMCEWVLQGTTFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEA 133
Query: 149 LKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKL 206
L +P+ + L+N Y A S EKAE + QM+ RG + N+ ++V Y++
Sbjct: 134 LCVPNEETFGVLINGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRA 193
Query: 207 DSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL-DWTVYATAA 265
++L ++E+ + + T++ ++ A + + + M R + + +
Sbjct: 194 EALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMR--RAMCPPNICTFTALM 251
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK 325
+ + + GL +A K + + AY+ ++ Y+ G+ L +++ ++N
Sbjct: 252 NAFARQGLYREAERYFDKLQEFD-YKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGC 310
Query: 326 VYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
+ + +I++ + E AEKIF+ +S +++ L+ AY R G + +AE
Sbjct: 311 FPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEE 370
Query: 385 LIYKAQLRGTEPNVRTWYLMATGY 408
L+ + GT+P+ + + Y
Sbjct: 371 LVSAMERDGTKPDTLIYNSLINAY 394
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 148/360 (41%), Gaps = 20/360 (5%)
Query: 84 EQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFN 143
E ++I +RL F A ++ + M K+ + P L ++ + +A + F
Sbjct: 140 ETFGVLINGYRLAGSFEKAEELFVQMQKRG-YSPGPLACNTFLHVLEDAKEYRRAEALFR 198
Query: 144 CVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
+ + P++ Y ++ Y A KAE++ + MR + ++MN + + G
Sbjct: 199 DLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQG 258
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVY 261
Y++ + +++E D Y ++ L+ A + G +I M+ + G D +
Sbjct: 259 LYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRN-GCFPDTVSH 317
Query: 262 ATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDFVITQYAACG---NKDDVLR 315
+ Y +AGL + A + + M FS ++ +++ YA G ++++
Sbjct: 318 NILINAYGRAGLYEDAEKIFKS----MQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVS 373
Query: 316 VWKR--YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAY 373
+R K + +YN I + + ME+ + S+ DI N LI Y
Sbjct: 374 AMERDGTKPDTLIYN-SLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVY 432
Query: 374 CRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTR 433
+ G + +AE L P+ TW + GY + K +KK +LE+G R
Sbjct: 433 AQAGFIPRAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKK---MLESGCR 489
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+ YA A +AE + Q + LV + ++M Y + Y+K S++ +M
Sbjct: 424 TYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKM 483
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
E G D T +L SAC + E ++++ +ME+ +G
Sbjct: 484 LESGCRADAVTARVLFSACRSP---EQVEQVTQLMESLQG 520
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 151/362 (41%), Gaps = 12/362 (3%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+L + ++ G P D L +IK L + AL + + F L A ++ +
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG-FQLNQVSYATLINGV 174
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
K+ A + + +L P V Y +++A + +A + +M +G+
Sbjct: 175 CKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADV 234
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVA 246
+ YN+++ + G K+ L++EM K I+ + YT++IL+ A C E +
Sbjct: 235 VTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
M++A V D Y+T GY KA V LM Y +I +
Sbjct: 295 MLKA--CVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMS-LMGVTPDVHTYTILINGF-- 349
Query: 307 CGNK--DDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
C NK D+ L ++K +++N+ Y +I L K + + +E R D+
Sbjct: 350 CKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADV 409
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ LID C+ G L +A L K + + PN+ T+ ++ G + + + E +
Sbjct: 410 ITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQD 469
Query: 424 AL 425
L
Sbjct: 470 LL 471
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 19/227 (8%)
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVA 246
I +N +++ + + +Y SL H +E KGI D T +IL++ C G +
Sbjct: 60 IQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAK 119
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQ 303
+++ RG D T G G KAL K ++ F +Y +I
Sbjct: 120 ILK--RGYPPDTVTLNTLIKGLCLKGQVKKALHFHDK----LLAQGFQLNQVSYATLING 173
Query: 304 YAACGNKDDVLRVWKRY-----KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
G+ ++ ++ K ++ +YN +I ++ K+ + A +F E +
Sbjct: 174 VCKIGDTRAAIKFLRKIDGRLTKPDVVMYNT----IIDAMCKYQLVSEAYGLFSEMAVKG 229
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
+ D+ N LI +C G L +A L+ + L+ PNV T+ ++
Sbjct: 230 ISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILV 276
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 71/142 (50%), Gaps = 6/142 (4%)
Query: 119 PADV---AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEI 173
PADV + +D + K +++A + FN + ++ P+++ LL+ + A+
Sbjct: 406 PADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQE 465
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ Q + +G YN M+N + + G ++ +++ +ME+ G + +TF ++ A
Sbjct: 466 VFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALF 525
Query: 234 AASDGEGIDKIVAMMEADRGVV 255
+ + +K++ M A RG++
Sbjct: 526 KKDENDKAEKLLRQMIA-RGLL 546
>gi|255562320|ref|XP_002522167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538605|gb|EEF40208.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 342
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 21/287 (7%)
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
M+D T N ++ + Y+ + KK+ ++ ME++ I +T+ +L+ ++D
Sbjct: 1 MKDLEFPVTTFACNQLL-LLYKRLDKKKIADVLLLMEKENIKPSLFTYKLLIDTKGQSND 59
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE--VLMMHNKFSR 295
G+D+IV M+AD G+ D + A A Y GL +KA A+L++ E L H R
Sbjct: 60 LTGMDQIVETMKAD-GIEPDINIRAILAKHYASGGLKEKAEAILKEMEGGNLEEHRWACR 118
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEE-- 353
++ YAA G D+V RVWK + + ++ + VI + K ++ AE++F
Sbjct: 119 ---LLLPLYAALGKADEVERVWKVCESSPQL--EECVAVIEAWGKLKKIDKAEEVFNRML 173
Query: 354 --WESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
W+ + H + L+ Y +L + LI K G TW + Y++
Sbjct: 174 TTWKKLSSRH----YSALLKVYASHKMLANGKDLIKKMADSGCRIGPLTWDSLVKLYVEA 229
Query: 412 NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
+ EK + KA KP + Y K D+ A+
Sbjct: 230 GEVEKADSVLHKA----AQQNHMKPMFSSYIVIMDQYAKRGDVHNAE 272
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 130/293 (44%), Gaps = 10/293 (3%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+ L+ ++ + +A F+ + + LP VY L++ + A +M R +
Sbjct: 766 IGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 825
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGID 242
+ Y ++++ + Q G+ + L HEM KG++ D TF+ L++ C A +
Sbjct: 826 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 885
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS-EVLMMHNKFSRAYDFVI 301
M++A G + Y T G K G D A +L + ++ + N F+ Y+ ++
Sbjct: 886 VHNHMIQA--GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT--YNSIV 941
Query: 302 TQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
GN ++ +++ ++ L Y ++ + K M+ A++I +E + L
Sbjct: 942 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 1001
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY-LQNN 412
I N L++ +C G+L E L+ +G PN T+ + Y ++NN
Sbjct: 1002 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 1054
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/348 (20%), Positives = 135/348 (38%), Gaps = 64/348 (18%)
Query: 120 ADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQ 177
A I + + ++ I++A + K P V Y ++N Y +K +++
Sbjct: 690 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 749
Query: 178 MRDRGL-----------------------------------VKKTIDYNSMMNVYYQTGN 202
M+ +GL + T+ Y ++++ + + G+
Sbjct: 750 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 809
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
+ +EM + I D T++ ++S D K+ M +G+ D +
Sbjct: 810 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC-KGLEPDSVTFT 868
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA--------YDFVITQYAACGNKDD-- 312
+GY KAG A V HN +A Y +I G+ D
Sbjct: 869 ELINGYCKAGHMKDAFRV---------HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 919
Query: 313 --VLRVWK-RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
+ +WK + N+ YN +++ L K +E A K+ E+E+ L D L
Sbjct: 920 ELLHEMWKIGLQPNIFTYNS----IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 975
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+DAYC+ G + KA+ ++ + +G +P + T+ ++ G+ + E G
Sbjct: 976 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 1023
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 133/324 (41%), Gaps = 52/324 (16%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ L+N Y A + A + M G + Y ++++ + G+ + L+HEM
Sbjct: 867 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ G+ + +T++ +++ + + E K+V EA G+ D Y T Y K+G
Sbjct: 927 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA-AGLNADTVTYTTLMDAYCKSGEM 985
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
DKA +L++ + K + + +N V
Sbjct: 986 DKAQEILKE-------------------------------MLGKGLQPTIVTFN-----V 1009
Query: 335 ISSLLKFDGM-ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL-R 392
+ + GM E EK+ ++ + + N L+ YC R L KA T IYK R
Sbjct: 1010 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL-KAATAIYKDMCSR 1068
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA--GTRWKPSKECLAACL-GYYK 449
G P+ +T+ + G+ + MK+A L + G + S + + G+ K
Sbjct: 1069 GVGPDGKTYENLVKGHCKARN-------MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 1121
Query: 450 KERDIEGADYFIKLLTGKEIISAD 473
+++ +E + F ++ +E ++AD
Sbjct: 1122 RKKFLEAREVFDQM--RREGLAAD 1143
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 111/260 (42%), Gaps = 19/260 (7%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFS-- 226
++A ++ M +G I Y++++N Y + G K+ L+ M+ KG+ + Y +
Sbjct: 706 KEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSI 765
Query: 227 --ILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS 284
+L C A E +++ +G++ D VY T G+ K G A +
Sbjct: 766 IGLLCRICKLAEAEEAFSEMIR-----QGILPDTVVYTTLIDGFCKRGDIRAASKFFYE- 819
Query: 285 EVLMMHNKFSRA----YDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLL 339
MH++ Y +I+ + G+ + +++ + + L+ + + +I+
Sbjct: 820 ----MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 875
Query: 340 KFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVR 399
K M+ A ++ ++ LID C+ G L A L+++ G +PN+
Sbjct: 876 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 935
Query: 400 TWYLMATGYLQNNQSEKGVE 419
T+ + G ++ E+ V+
Sbjct: 936 TYNSIVNGLCKSGNIEEAVK 955
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 5/247 (2%)
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+I +M D+GL + +N +++ + G + L+ M E GI D T++ L+
Sbjct: 246 MIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGF 305
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
D ++ M + +G D Y +GY K ++A+ + +E+L++ +
Sbjct: 306 CMVGDLNSARELFVSMPS-KGCEPDVISYNVLINGYSKTLKVEEAMKLY--NEMLLVGKR 362
Query: 293 FSR-AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKI 350
+ YD ++ G DD +++ K + N Y + L K D + A K+
Sbjct: 363 PNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKL 422
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
F E +S N +I N LID C+ G L A L K G EPNV T+ +M G+ +
Sbjct: 423 FTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCR 482
Query: 411 NNQSEKG 417
Q +K
Sbjct: 483 EGQVDKA 489
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 115/266 (43%), Gaps = 25/266 (9%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+A+ ++ M + G+V + YNS++ + G+ L M KG + D ++++L+
Sbjct: 278 EAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLI 337
Query: 230 SACAAASDGEGIDKIVAMMEADR--------GVVLDWTVYATAASGYVKAGLSDKALAVL 281
+ G K + + EA + G + Y + G AG D A +
Sbjct: 338 N---------GYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLF 388
Query: 282 RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ----NLKVYNRGYICVISS 337
V+ H +Y + I C N D + K + + N K+ C+I
Sbjct: 389 ---SVMKAHGIAENSYTYGIFLDGLCKN-DCLFEAMKLFTELKSSNFKLEIENLNCLIDG 444
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
L K +E+A ++FE+ + ++ +I +CR G + KA LI K + G P+
Sbjct: 445 LCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPD 504
Query: 398 VRTWYLMATGYLQNNQSEKGVEAMKK 423
+ T+ + G+ ++N+ E+ V+ + +
Sbjct: 505 IITYNTLMRGFYESNKLEEVVQLLHR 530
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Query: 111 KKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSA 168
K SNF L ++ +D + K +E A F + + P+V Y +++ +
Sbjct: 427 KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQV 486
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
+KA +++Q+M G I YN++M +Y++ +++ L+H M +K + D T SI+
Sbjct: 487 DKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIV 546
Query: 229 L 229
+
Sbjct: 547 V 547
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 123/321 (38%), Gaps = 34/321 (10%)
Query: 137 QAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
A +F+ + PS+ + LL+ A K + + QMR GL N ++
Sbjct: 52 HALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILL 111
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRG 253
N ++ + + +G + T++ L+ C E + M + G
Sbjct: 112 NCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKL--G 169
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----------AYDFVITQ 303
D Y T G G + AL + ++ M N SR Y+ ++
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQE-----MLNDISRYEINCKPNVITYNIIVDG 224
Query: 304 YAACGNKDDVLRVWKRYK-----------QNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
G +D+ ++++ K Q L+ + +I +L K + A+K+
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLG 284
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
+ D+ N LI+ +C G L+ A L +G EP+V ++ ++ GY +
Sbjct: 285 VMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGY---S 341
Query: 413 QSEKGVEAMKKALVLLEAGTR 433
++ K EAMK +L G R
Sbjct: 342 KTLKVEEAMKLYNEMLLVGKR 362
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 181/443 (40%), Gaps = 71/443 (16%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
+ V + +Q G D + I+ K + K HAL+ MTK V A A+
Sbjct: 226 ATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAV- 284
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMR-DRG 182
++ +V A + +P + P++ Y L+ Y K+ E+AE ++Q++R ++
Sbjct: 285 MNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQ 344
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
LV + +++N Y Q G + L++EM + + + + ++I+++ G
Sbjct: 345 LVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMIN---------GYC 395
Query: 243 KIVAMMEADR--------GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
K+ M+EA GV D Y + GY K GL +KA M+ N F+
Sbjct: 396 KLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNT----MLRNGFA 451
Query: 295 RA---YDFVITQYAACGNKDDVLRVW-------------------------KRYKQNLKV 326
Y+ ++ + + G+ DD LR+W + ++ L +
Sbjct: 452 ATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNL 511
Query: 327 YN----RG-------YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
+ RG + VI+ L K + M AE++ ++ + DI L YC+
Sbjct: 512 WKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCK 571
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTR-W 434
G + +A ++ + + G P + + + TG+ Q K + +L E R
Sbjct: 572 IGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVND------ILFEMSNRGL 625
Query: 435 KPSKECLAACLGYYKKERDIEGA 457
P+ A + + KE D+ A
Sbjct: 626 SPNTVAYGALIAGWCKEGDLHTA 648
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 115/274 (41%), Gaps = 12/274 (4%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
LL A A A + A + +MR G NS++N QTG+ ++ +M+ G
Sbjct: 179 LLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAG 238
Query: 218 IDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
DK+T +I+ A C ++ + M + GV ++ Y +GY + G ++
Sbjct: 239 ALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKM--GVEVNLVAYHAVMNGYCEVGQTND 296
Query: 277 ALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQN--LKVYNRGY 331
A +L + FS Y ++ Y N ++ V + ++N L V +
Sbjct: 297 ARRMLDS----LPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVF 352
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
VI+ + ME A ++ E L ++ + N +I+ YC+ G + +A ++++
Sbjct: 353 GAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTG 412
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
G P+ ++ + GY + K E L
Sbjct: 413 VGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTML 446
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 126/334 (37%), Gaps = 75/334 (22%)
Query: 127 DLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
DL A V EQ +P+K + + AY K A +++M G+
Sbjct: 223 DLGATVAVFEQMQRA-GALPDKFTV----AIMAKAYCKVKGVVHALEFVEEMTKMGVEVN 277
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ Y+++MN Y + G ++ + +G + T+++L+ + E + +V
Sbjct: 278 LVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQ 337
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
+ ++ +V+D V+ +GY + G + A +L +
Sbjct: 338 EIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNE----------------------- 374
Query: 307 CGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
V R + NL VYN +I+ K M A I E + D
Sbjct: 375 --------MVDSRLQVNLFVYN----IMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSY 422
Query: 367 NHLIDAYCRRGLLHK--------------AETLIYKAQLRG------TEPNVRTWYLMAT 406
N L+D YC++GL++K A TL Y A L+G + +R W+LM
Sbjct: 423 NSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLK 482
Query: 407 ---------------GYLQNNQSEKGVEAMKKAL 425
G+ ++ ++EK + K+ L
Sbjct: 483 KGIAPNEISCSTLLDGFFKSGKTEKALNLWKETL 516
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 5/130 (3%)
Query: 162 YACAKSAE--KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGID 219
Y KS E +A + +++ +G+ I YN++++ + + G + L M E+GI
Sbjct: 803 YGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIH 862
Query: 220 CDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKAL 278
+T+SIL++ C E I + M+E + V ++ Y T GYV+ D +
Sbjct: 863 PTVFTYSILINGLCTQGYMEEAIKLLDQMIENN--VDPNYVTYWTLIQGYVRCESVDVPI 920
Query: 279 AVLRKSEVLM 288
L +S +++
Sbjct: 921 MPLDQSTIVV 930
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 146/345 (42%), Gaps = 38/345 (11%)
Query: 114 NFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKA 171
NF +I +D + K + ++A F + + P+V Y +L++ + C E+A
Sbjct: 237 NFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEA 296
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
+ + +M ++G+ + +N +++V + G + L+ M ++GI + T++ L+
Sbjct: 297 KRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEG 356
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA-------LAVLRKS 284
D ++ M + +G D Y +GY K ++A L V ++
Sbjct: 357 FCLVGDLNSARELFVSMPS-KGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRP 415
Query: 285 EV---------LMMHNKFSRA----------------YDFVITQYAACGNKD--DVLRVW 317
+V L K A Y + I C N + + ++
Sbjct: 416 DVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELF 475
Query: 318 KRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRR 376
+ K N+K+ + C+I L K +E+A ++FE+ L D+ N +I +CR
Sbjct: 476 NKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRG 535
Query: 377 GLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
G + KA L K + G P+ T+ + G+ ++ + EK VE +
Sbjct: 536 GQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELL 580
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 13/212 (6%)
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTV 260
+Y ++ L ++M GI D T +ILL+ C GEG+ + ++ RG + D
Sbjct: 111 HYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILR--RGYIPDIVT 168
Query: 261 YATAASGY-VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR 319
Y T G ++ +S AL R ++ N + Y ++ GN L++ +
Sbjct: 169 YTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAIT--YGTLMKGLCRTGNISIALKLHQE 226
Query: 320 -------YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
Y N K Y +I +L K + A +FEE + + + + LI
Sbjct: 227 MLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHG 286
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
+C G +A+ L + +G +PNV T+ ++
Sbjct: 287 FCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVL 318
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K +E A F +P++ P V Y +++ + KA I+ Q+M G
Sbjct: 494 IDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGC 553
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCD 221
I Y +++ ++++ +K+ L+H M ++ + D
Sbjct: 554 TPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 591
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 124/296 (41%), Gaps = 47/296 (15%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y LLN EKAE ++ ++ + G+ I YN ++N Y Q G+ KK +ME
Sbjct: 328 YCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQME 387
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
E+G++ ++ TF+ ++S + + + V M ++GV Y + +GY + G
Sbjct: 388 ERGLEPNRITFNTVISKFCETGEVDHAETWVRRM-VEKGVSPTVETYNSLINGYGQKG-- 444
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFV-----------ITQYAA---CGNKDDVL------ 314
F R ++F+ + Y + C KD L
Sbjct: 445 -----------------HFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIV 487
Query: 315 ---RVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
+ + N ++YN +I + ++ A + F+E + + N LI+
Sbjct: 488 LADMIGRGVSPNAEIYNM----LIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLIN 543
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVL 427
R G + KAE L + +G P+V T+ + +GY ++ ++K +E K +L
Sbjct: 544 GLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKIL 599
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 107/264 (40%), Gaps = 45/264 (17%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PSV Y +L + + A + +M R +V T+ YN++++ Y + G ++
Sbjct: 190 PSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGF 249
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
M+E+ ++C+ T++ LL+ + + +++ ME SG++
Sbjct: 250 KERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEME---------------GSGFL 294
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
G FV ++ G DD L K +++ R
Sbjct: 295 PGGF-----------------------LSFVFDDHSN-GAGDDGLFDGKE----IRIDER 326
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +++ L + +E AE++ + + N L++AYC+ G + KA +
Sbjct: 327 TYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQM 386
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQ 413
+ RG EPN T+ + + + + +
Sbjct: 387 EERGLEPNRITFNTVISKFCETGE 410
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 162 YACAKSAE-KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
YAC K + + Q+M LV YN M+ Y + GN K SL +M ++G+DC
Sbjct: 613 YACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDC 672
Query: 221 DKYTFSILLSA 231
DK T++ L+ A
Sbjct: 673 DKVTYNSLILA 683
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 110/266 (41%), Gaps = 20/266 (7%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y +L+N + AEI++ M RG+ YN ++ K
Sbjct: 463 PNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRF 522
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
EM + GID T++ L++ + + + M A +G D Y + SGY
Sbjct: 523 FDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQM-AGKGCNPDVITYNSLISGYA 581
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK---- 325
K+ + K L + K ++L + + + AC K+ V+ + K +++ L+
Sbjct: 582 KSVNTQKCLELYDKMKILGIKPTVGTFHPLIY----AC-RKEGVVTMDKMFQEMLQMDLV 636
Query: 326 ----VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
VYN +I S + + A + ++ + + D N LI AY R + +
Sbjct: 637 PDQFVYNE----MIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSE 692
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATG 407
+ L+ + +G P V T+ ++ G
Sbjct: 693 IKHLVDDMKAKGLVPKVDTYNILIKG 718
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 119 PADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQM 178
P A R + + + + Q + VP++ VY ++ +YA + KA + QQM
Sbjct: 610 PLIYACRKEGVVTMDKMFQEMLQMDLVPDQF----VYNEMIYSYAEDGNVMKAMSLHQQM 665
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG 238
D+G+ + YNS++ Y + ++ L+ +M+ KG+ T++IL+ D
Sbjct: 666 VDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDF 725
Query: 239 EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV 280
G M +RG++L+ ++ SG + G+ +A V
Sbjct: 726 NGAYFWYREM-VERGLLLNVSMCYQLISGLREEGMLREAQIV 766
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 143/324 (44%), Gaps = 7/324 (2%)
Query: 89 IIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEK 148
++ F YK + Q+ W+ + + F + +D K IE A FN + E
Sbjct: 74 VVVHFWNYKDWPRVTQMCEWVLQGTAFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEA 133
Query: 149 LKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKL 206
L +P+ + L+N Y A S EKAE + QM+ RG + N+ ++V Y++
Sbjct: 134 LCVPNEETFGVLINGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRA 193
Query: 207 DSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL-DWTVYATAA 265
++L ++E+ + + T++ ++ A + + + M R + + +
Sbjct: 194 EALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMR--RAMCPPNICTFTALM 251
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK 325
+ + + GL +A K + + AY+ ++ Y+ G+ L +++ ++N
Sbjct: 252 NAFARQGLYREAERYFDKLQEFD-YKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGC 310
Query: 326 VYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
+ + +I++ + E AEKIF+ +S +++ L+ AY R G + +AE
Sbjct: 311 FPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEE 370
Query: 385 LIYKAQLRGTEPNVRTWYLMATGY 408
L+ + GT+P+ + + Y
Sbjct: 371 LVSAMERDGTKPDTLIYNALINAY 394
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 148/360 (41%), Gaps = 20/360 (5%)
Query: 84 EQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFN 143
E ++I +RL F A ++ + M K+ + P L ++ + +A + F
Sbjct: 140 ETFGVLINGYRLAGSFEKAEELFVQMQKRG-YSPGPLACNTFLHVLEDAKEYRRAEALFR 198
Query: 144 CVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
+ + P++ Y ++ Y A KAE++ + MR + ++MN + + G
Sbjct: 199 DLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQG 258
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVY 261
Y++ + +++E D Y ++ L+ A + G +I M+ + G D +
Sbjct: 259 LYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRN-GCFPDTVSH 317
Query: 262 ATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDFVITQYAACG---NKDDVLR 315
+ Y +AGL + A + + M FS ++ +++ YA G ++++
Sbjct: 318 NILINAYGRAGLYEDAEKIFKS----MQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVS 373
Query: 316 VWKR--YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAY 373
+R K + +YN I + + ME+ + S+ DI N LI Y
Sbjct: 374 AMERDGTKPDTLIYN-ALINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVY 432
Query: 374 CRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTR 433
+ G + KAE L P+ TW + GY + K +KK +LE+G R
Sbjct: 433 AQAGFIPKAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKK---MLESGCR 489
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+ YA A KAE + Q + LV + ++M Y + Y+K S++ +M
Sbjct: 424 TYNTLIQVYAQAGFIPKAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKM 483
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
E G D T +L SAC + E ++++ +ME+ +G
Sbjct: 484 LESGCRADAVTARVLFSACRSP---EQVEQVTQLMESLQG 520
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 134/347 (38%), Gaps = 53/347 (15%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
D +E G ++ +++ FR + AL + M K+ F + I LD +
Sbjct: 157 FFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEM-KRRGFQPSVVTYNILLDAL 215
Query: 130 AKVQGIEQAASYFN------CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+ A F+ C P+ Y L+N + E+A + ++M DRG+
Sbjct: 216 CSAGRVGAARKLFHKMTGDGCSPDSY----TYSTLVNGLGKSGRVEEAHKVFREMVDRGV 271
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
++YNS++ + GN ++ LM EM KG D ++F+ ++ A A+ + +
Sbjct: 272 AVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAARE 331
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFV 300
+ A M + G D Y Y + G + +A +L + M+ F ++ Y+ +
Sbjct: 332 VFARM-VESGCKPDLISYNILIDSYARFGDAAQARQMLEE----MVEAGFIPETKTYNSL 386
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
I A G D+ V EE E+
Sbjct: 387 IHWLATDGQVDEAFAV----------------------------------LEEMETAGCR 412
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
D+ N L+D +RG +A L + + +G EP+ ++ + G
Sbjct: 413 PDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDG 459
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 17/256 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+NA A ++A M +RGL YN +M+ + + G L EM
Sbjct: 137 TYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEM 196
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ +G T++ILL A +A K+ M D G D Y+T +G K+G
Sbjct: 197 KRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGD-GCSPDSYTYSTLVNGLGKSGR 255
Query: 274 SDKALAVLR----KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYN 328
++A V R + + + N Y+ ++ A GN D RVWK K+ + K ++
Sbjct: 256 VEEAHKVFREMVDRGVAVDLVN-----YNSLLATLAKAGNMD---RVWKLMKEMSRKGFH 307
Query: 329 R---GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+ ++ +L K + ++A ++F D+ N LID+Y R G +A +
Sbjct: 308 PDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQM 367
Query: 386 IYKAQLRGTEPNVRTW 401
+ + G P +T+
Sbjct: 368 LEEMVEAGFIPETKTY 383
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 77/380 (20%), Positives = 144/380 (37%), Gaps = 60/380 (15%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D + LL + V EGRPL L +I + + A +
Sbjct: 12 DPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDL------------------- 52
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
QA S F C P + L++ + E+AE++ +++ +G
Sbjct: 53 ----------FNQAES-FACSPTV----HAFTKLIDILVNSGEFERAELVYKKLVQKGCQ 97
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD-GEGIDK 243
YN ++ + ++G + EM+ KG + D+YT+ L++A A E
Sbjct: 98 LDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSF 157
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA---YDFV 300
AM+E RG+ + Y + K G D AL + + M F + Y+ +
Sbjct: 158 FDAMLE--RGLTPNIPTYNLLMDAFRKVGQLDMALGLFAE----MKRRGFQPSVVTYNIL 211
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNRG-------YICVISSLLKFDGMESAEKIFEE 353
+ + G RV K K+ G Y +++ L K +E A K+F E
Sbjct: 212 LDALCSAG------RVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFRE 265
Query: 354 WESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
R + D+ N L+ + G + + L+ + +G P+ ++ + + N+
Sbjct: 266 MVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANK 325
Query: 414 SEKGVEAMKKALVLLEAGTR 433
+ E + ++E+G +
Sbjct: 326 PDAAREVFAR---MVESGCK 342
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 14/189 (7%)
Query: 137 QAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
+A + FN + + P + Y +LLNAY + EKA + +M+ + YN+++
Sbjct: 241 EALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALI 300
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--DR 252
+ Y G K+ L+HEME+ GI D + S LL+AC I +I ++EA R
Sbjct: 301 DAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQ---ITRIETILEAARSR 357
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAV---LRKSEVLMMHNKFSRAYDFVITQYAACGN 309
G+ L+ Y + Y+ G +KAL + +R+S V + Y+ +I+ + G
Sbjct: 358 GIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNV----KPDAVTYNILISGSSKLGK 413
Query: 310 KDDVLRVWK 318
+ LR ++
Sbjct: 414 YTESLRFFE 422
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 135/337 (40%), Gaps = 56/337 (16%)
Query: 109 MTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYF------NCVPEKLKLPSVYIALLNAY 162
M + N+ + + L A+ ++QA F C P+ +Y +L++A+
Sbjct: 1 MKNQDNYCARNDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPD----ADIYNSLIHAH 56
Query: 163 ACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDK 222
+ A A IM+ M + YN+++N GN+KK L +M E G+ D
Sbjct: 57 SRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDL 116
Query: 223 YTFSILLSA-------------------CAAASD-----------------GEGIDKIVA 246
T +I+LSA SD GE I+ +
Sbjct: 117 VTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNS 176
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQ 303
M E D Y + Y G + A+ LM+ AY+ ++
Sbjct: 177 MRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFD----LMVAEGVKPNIVAYNSLLGA 232
Query: 304 YAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
YA+ G + L ++ K+N L+ Y ++++ + E A ++F + + +N C
Sbjct: 233 YASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMK-KNSCKP 291
Query: 363 IRIP-NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
++ N LIDAY G+L +A L+++ + G +P+V
Sbjct: 292 NKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDV 328
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 131/309 (42%), Gaps = 48/309 (15%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PS+ Y L+N +K E AE + + M + + + YN+M+ Y + G +K
Sbjct: 212 PSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEK 271
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+ ME + + DK T+ L+ AC A D + + M+ ++G+ + VY+ G
Sbjct: 272 LKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMD-EKGLEIPPHVYSLVIGGLC 330
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRA----YDFVITQYAACGNKDDVLRVWKRY-KQNL 324
K G + V M +K +A Y +I A CGN + + ++KR K+ L
Sbjct: 331 KDGKRVEGYTVFEN-----MISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGL 385
Query: 325 KVYNRGYICVISSLLK-----------------------------FDGM------ESAEK 349
+ Y +++SL K DG+ + AE+
Sbjct: 386 EPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAER 445
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
IF E + D N LIDA + G + +A L + ++ G + V T+ ++ TG
Sbjct: 446 IFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLF 505
Query: 410 QNNQSEKGV 418
+ +++E+ +
Sbjct: 506 REHRNEEAL 514
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 124/270 (45%), Gaps = 5/270 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y++L++ A + + + + ++ GL+ NS++ + G +++ + M+
Sbjct: 147 YVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMK 206
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
E GI+ ++++ L++ + E +++ +ME + + D Y T GY + G +
Sbjct: 207 ENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGK-IGPDVVTYNTMIKGYCEVGKT 265
Query: 275 DKALAVLRKSEVL-MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYI 332
KA L+ E+ + +K + Y +I A G+ D L ++ ++ L++ Y
Sbjct: 266 RKAFEKLKAMELRNVAPDKIT--YMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYS 323
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
VI L K +FE S+ ++ I LID+ + G + +A L + +
Sbjct: 324 LVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKE 383
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
G EP+ T+ ++ ++ + ++ +E M+
Sbjct: 384 GLEPDEVTYGVIVNSLCKSGRLDEALEYME 413
>gi|297792331|ref|XP_002864050.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
gi|297309885|gb|EFH40309.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
Length = 723
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 149/317 (47%), Gaps = 17/317 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ L+ ++ E+A +I +M +G+ TI YN++M+ Y ++ + ++++ L E+
Sbjct: 346 VFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFAEI 405
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA-G 272
+ KG+ T++IL+ A A + ++ ++ ME D G+ + + S Y +
Sbjct: 406 KAKGLKPTAATYNILMDAYARRMQPDIVETLLREME-DLGLEPNVKSFTCLISAYGRTKK 464
Query: 273 LSDKAL-AVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRG 330
+SD A A LR +V + + S +Y +I Y+ G + ++ + + +K
Sbjct: 465 MSDMAADAFLRMKKVGLKPS--SHSYTALIHAYSVSGWHEKAYASFEEMWMEGIKPSVET 522
Query: 331 YICVISSLLKFDGMESAEKIFEEWE--SRNLCHDIRIP-NHLIDAYCRRGLLHKAETLIY 387
Y ++ + F EK+ E W+ R RI N L+D + ++GL +A ++
Sbjct: 523 YTSLLDA---FRRSGDTEKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVS 579
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGY 447
+ G +P+V T+ ++ Y + Q K + +K+ A KP + +
Sbjct: 580 EFGKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEM-----AALNLKPDSITYSTMIYA 634
Query: 448 YKKERDIEGADYFIKLL 464
+ + RD + A ++ K++
Sbjct: 635 FVRVRDFKRAFFYHKMM 651
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 118/274 (43%), Gaps = 12/274 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y +L+ K KA ++ +M+ G++ I Y +++ ++ L M
Sbjct: 499 TYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMM 558
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
E+ G+ D++ +++L A C A E IV +GV L Y T G+ KAG
Sbjct: 559 EQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR-----KGVALTKVYYTTLIDGFSKAG 613
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK--DDVLRVWKRYK-QNLKVYNR 329
+D A ++ E ++ +Y + + +A C K ++ L + + + +K
Sbjct: 614 NTDFAATLI---ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIF 670
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +I +L+ + A++++ E S I++YC+ G L AE LI K
Sbjct: 671 AYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKM 730
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ G P+V T+ ++ G ++ +K+
Sbjct: 731 EREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKR 764
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 102/253 (40%), Gaps = 37/253 (14%)
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS 230
A ++ M G+V + YN+M+ Y + G + ME+ G D +T++ L+
Sbjct: 307 ARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIY 366
Query: 231 ACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH 290
E + + ++ G + +GY A D AL + K MM
Sbjct: 367 GLCDQKTEEAEELLNNAVK--EGFTPTVVTFTNLINGYCMAEKFDDALRMKNK----MMS 420
Query: 291 NKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKI 350
+K K +L+V+ + +I+SL+K D ++ A+++
Sbjct: 421 SKC---------------------------KLDLQVFGK----LINSLIKKDRLKEAKEL 449
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
E + L ++ +ID YC+ G + A ++ + G +PN T+ + G ++
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509
Query: 411 NNQSEKGVEAMKK 423
+ + K + + K
Sbjct: 510 DKKLHKAMALLTK 522
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 124/337 (36%), Gaps = 37/337 (10%)
Query: 102 ALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQ----AASYFNC--VPEKLKL---- 151
AL W+ ++ F T A L L+++ + Q S NC E +++
Sbjct: 73 ALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVSADA 132
Query: 152 ---------------PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNV 196
P Y L + A E + Q+ GL+ T+ YN+M+
Sbjct: 133 IQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKS 192
Query: 197 YYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL 256
Y + G+ + E G++ + +T + L+ + + MM G
Sbjct: 193 YCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPL-MGCQR 251
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDFVITQYAACGNKDDV 313
+ Y G A KAL + ++M + S RA+ F+I+ G D
Sbjct: 252 NEYSYTILIQGLCDAKCVRKALVLF----LMMKRDGCSPNVRAFTFLISGLCKSGRVGDA 307
Query: 314 LRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCH-DIRIPNHLID 371
++ QN V + Y +I K M A KI E E +N CH D N LI
Sbjct: 308 RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELME-KNGCHPDDWTYNTLIY 366
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
C + +AE L+ A G P V T+ + GY
Sbjct: 367 GLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGY 402
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 150/360 (41%), Gaps = 34/360 (9%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR 125
S + L D+ +EG + ++I+ FR AL+ + K LTP+ +
Sbjct: 357 SALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALE---FYKKMEVLGLTPSVFHVH 413
Query: 126 LDLIA--KVQGIEQAASYFNCVPEKLKLPSVYIALLNAYAC----------AKSAEKAEI 173
+ K Q E+A F+ S L N + C K+ E E+
Sbjct: 414 TIIQGWLKGQKHEEALKLFD--------ESFETGLANVFVCNTILSWLCKQGKTDEATEL 465
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ +M RG+ + YN++M + + N + + EKG+ + YT+SIL+ C
Sbjct: 466 -LSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCF 524
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK- 292
D + ++V M + + ++ VY T +G K G + KA +L M+ K
Sbjct: 525 RNHDEQNALEVVNHMTSS-NIEVNGVVYQTIINGLCKVGQTSKARELLAN----MIEEKR 579
Query: 293 ---FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAE 348
+Y+ +I + G D + ++ N N Y +++ L K + M+ A
Sbjct: 580 LCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQAL 639
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
++ +E +++ + DI LID +C+R + A L + G P+ + + +G+
Sbjct: 640 EMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 148 KLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLD 207
KL +P+ Y AL++ + + E A + ++ + GL YNS+++ + GN
Sbjct: 651 KLDIPA-YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAAL 709
Query: 208 SLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI--DKIVAMMEADRGVVLDWTVYATAA 265
L +M + G+ CD T++ L+ DG I ++ M+A G+V D +Y
Sbjct: 710 DLYKKMLKDGLRCDLGTYTTLIDGL--LKDGNLILASELYTEMQA-VGLVPDEIIYTVIV 766
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRA--YDFVITQYAACGNKDDVLRV 316
+G K G + + V++ E + +N Y+ VI + GN D+ R+
Sbjct: 767 NGLSKKG---QFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRL 816
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 100/271 (36%), Gaps = 37/271 (13%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
LLNAY+ + + A I+ QM + ++ N ++ Q + + L M G
Sbjct: 169 LLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIG 228
Query: 218 IDCDKYTFSILLSACA-AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
+D D T +L+ A E ++ + +E RG D +Y+ A K
Sbjct: 229 VDGDNVTTQLLMRASLREEKPAEALEVLSRAIE--RGAEPDSLLYSLAVQACCKTLDLAM 286
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVIS 336
A ++LR+ + + Y VI GN DD +R+
Sbjct: 287 ANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLK------------------- 327
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
+E S + ++ LI +C+ L A L K + G P
Sbjct: 328 ---------------DEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSP 372
Query: 397 NVRTWYLMATGYLQNNQSEKGVEAMKKALVL 427
N T+ ++ + +N + EK +E KK VL
Sbjct: 373 NSVTFSVLIEWFRKNGEMEKALEFYKKMEVL 403
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+++ +Y ++N + K + ++M+ + + YN+++ +Y+ GN
Sbjct: 756 VPDEI----IYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLD 811
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSA 231
+ L EM +KGI D TF IL+S
Sbjct: 812 EAFRLHDEMLDKGILPDGATFDILVSG 838
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 133/295 (45%), Gaps = 6/295 (2%)
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRD 180
I +D + K + +++A + F + +K P V Y AL++ + ++A + ++ R
Sbjct: 209 TIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARA 268
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM-EEKGIDCDKYTFSILLSACAAASDGE 239
+G + YN+M++ + G + +L +M E + D +T+S L++ ++ GE
Sbjct: 269 KGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGE 328
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
++ M D G D Y T G K+G DKA+ + RK V + + Y
Sbjct: 329 KAYELYEEM-LDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTV 387
Query: 300 VITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
+I ++ D +++ K + ++L + VI L K ++ A ++FE +
Sbjct: 388 LIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESI-GKT 446
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
D + N ++ YC+ + A+ L + G P + T+ + TG+ + +
Sbjct: 447 CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGR 501
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 116/301 (38%), Gaps = 36/301 (11%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
LL+ Y A+ E A + Q + YN++MN +++ G+ KK +L EM++ G
Sbjct: 108 LLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSG 167
Query: 218 IDCDKYTFSILLSACAAA---------SDGEGI---------------------DKIVAM 247
I + +L C+ D GI DK + +
Sbjct: 168 IAVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITL 227
Query: 248 ME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
+ D+ + D Y G K +A + ++ H Y+ +I
Sbjct: 228 FKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVV-TYNTMIDGLC 286
Query: 306 ACGNKDDVLRVWKRY--KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
CG ++ L ++ + +LK Y +I+ L + E A +++EE D+
Sbjct: 287 KCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDV 346
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGT-EPNVRTWYLMATGYLQNNQSEKGVEAMK 422
N L+D C+ G KA + K + +PNV T+ ++ + + ++ V+ K
Sbjct: 347 VTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAK 406
Query: 423 K 423
+
Sbjct: 407 E 407
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 118/274 (43%), Gaps = 12/274 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y +L+ K KA ++ +M+ G++ I Y +++ ++ L M
Sbjct: 499 TYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMM 558
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
E+ G+ D++ +++L A C A E IV +GV L Y T G+ KAG
Sbjct: 559 EQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR-----KGVALTKVYYTTLIDGFSKAG 613
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK--DDVLRVWKRYK-QNLKVYNR 329
+D A ++ E ++ +Y + + +A C K ++ L + + + +K
Sbjct: 614 NTDFAATLI---ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIF 670
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +I +L+ + A++++ E S I++YC+ G L AE LI K
Sbjct: 671 AYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKM 730
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ G P+V T+ ++ G ++ +K+
Sbjct: 731 EREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKR 764
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 121/304 (39%), Gaps = 53/304 (17%)
Query: 132 VQGIEQAASYFNCVPEKLKL----------PSV--YIALLNAYACAKSAEKAEIIMQQMR 179
+QG+ +A CV E L L P+V + L++ + A ++ M
Sbjct: 260 IQGLCEA----KCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMP 315
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
G+V + YN+M+ Y + G + ME+ G D +T++ L+ E
Sbjct: 316 QNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEE 375
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
+ + ++ G + +GY A D AL + K MM +K
Sbjct: 376 AEELLNNAVK--EGFTPTVVTFTNLINGYCMAEKFDDALRMKNK----MMSSKC------ 423
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
K +L+V+ + +I+SL+K D ++ A+++ E + L
Sbjct: 424 ---------------------KLDLQVFGK----LINSLIKKDRLKEAKELLNEISANGL 458
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
++ +ID YC+ G + A ++ + G +PN T+ + G +++ + K +
Sbjct: 459 VPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMA 518
Query: 420 AMKK 423
+ K
Sbjct: 519 LLTK 522
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 125/337 (37%), Gaps = 37/337 (10%)
Query: 102 ALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQ----AASYFNC--VPEKLKL---- 151
AL W+ ++ F T A L L+++ + Q S NC E +++
Sbjct: 73 ALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVSADA 132
Query: 152 ---------------PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNV 196
P Y L + A E + Q+ GL+ T+ YN+M+
Sbjct: 133 IQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKS 192
Query: 197 YYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL 256
Y + G+ + E G++ + +T + L+ + + MM G
Sbjct: 193 YCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPL-MGCQR 251
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDFVITQYAACGNKDDV 313
+ Y G +A +AL + ++M + S RA+ F+I+ G D
Sbjct: 252 NEYSYTILIQGLCEAKCVREALVLF----LMMKRDGCSPNVRAFTFLISGLCKSGRVGDA 307
Query: 314 LRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCH-DIRIPNHLID 371
++ QN V + Y +I K M A KI E E +N CH D N LI
Sbjct: 308 RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELME-KNGCHPDDWTYNTLIY 366
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
C + +AE L+ A G P V T+ + GY
Sbjct: 367 GLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGY 402
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 129/277 (46%), Gaps = 17/277 (6%)
Query: 144 CVPEKLK----LPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVY 197
C+ EK++ PS + ++ YA A + A + MR G V + YN++++
Sbjct: 530 CILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGL 589
Query: 198 YQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVL 256
+ ++ S++ +M GI +++T++I++ AA+ D G+ + + E+ G+ L
Sbjct: 590 VRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKES--GLKL 647
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDV 313
D +Y T K+G ALAV R+ M K R Y+ +I +A G+ +
Sbjct: 648 DVYIYETLLRACCKSGRMQSALAVTRE----MSFQKIPRNTFIYNILIDGWARRGDVWEA 703
Query: 314 LRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
+ K+ K++ N Y I++ K M+ AEK+ EE L +++ LI
Sbjct: 704 EDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKG 763
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
+ R L +A + +L G +P+ +++ + T L
Sbjct: 764 WARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLL 800
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 3/256 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ +L++AYA A+ A +++M+ GL + Y+ +++ + + + + D+L E
Sbjct: 301 VFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEA 360
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ K + +S ++ A + + E +++V ME D G+ VY + GY
Sbjct: 361 KTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEED-GIDAPIDVYHSMMHGYTIIQN 419
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYI 332
+K L V + + +Y ++ Y G L + K + +K N+ Y
Sbjct: 420 ENKCLVVFERLKECGFKPSII-SYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYS 478
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I+ + +A IFEE L D I N LI+A+C+ G + +A ++ K Q
Sbjct: 479 MLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKE 538
Query: 393 GTEPNVRTWYLMATGY 408
+P+ R + + GY
Sbjct: 539 RMQPSNRAFRPIIEGY 554
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 105/270 (38%), Gaps = 36/270 (13%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY ++++ Y ++ K ++ +++++ G I Y ++N+Y + G K S+ EM
Sbjct: 406 VYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEM 465
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E GI + T+S+L++ D I M G+ D +Y + K G
Sbjct: 466 ESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM-LRSGLQPDRAIYNLLIEAFCKMGN 524
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
D+A+ +L K + M +RA+ +I YA G+
Sbjct: 525 MDRAICILEKMQKERMQPS-NRAFRPIIEGYAVAGD------------------------ 559
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
M+SA + + N LI R+ + +A +++ K + G
Sbjct: 560 ----------MKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAG 609
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
PN T+ ++ GY + K E K
Sbjct: 610 ITPNEHTYTIIMRGYAASGDIGKAFEYFTK 639
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
Query: 135 IEQAASYFNCVPEK-LKLPSVYIALLNAYACAKSA--EKAEIIMQQMRDRGLVKKTIDYN 191
I +A YF + E LKL VYI AC KS + A + ++M + + + T YN
Sbjct: 630 IGKAFEYFTKIKESGLKL-DVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYN 688
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
+++ + + G+ + + LM +M+E G+ + +T++ ++AC A D + +K++ M D
Sbjct: 689 ILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEM-VD 747
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKAL 278
G+ + Y T G+ + L D+AL
Sbjct: 748 VGLKPNVKTYTTLIKGWARVSLPDRAL 774
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 117/269 (43%), Gaps = 9/269 (3%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+NAY +A +M M +GL YN+++N + G Y + + +EM
Sbjct: 223 YNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEML 282
Query: 215 EKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
G+ D T+ ++L+ +C + E D M+ RGV D +++ + G
Sbjct: 283 SIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLH--RGVSPDLISFSSLIGVSSRNGH 340
Query: 274 SDKALAVLR--KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-KRYKQNLKVYNRG 330
D+AL R K+ L+ N Y +I Y G + L + K +Q +
Sbjct: 341 LDQALMYFRDMKTSGLVPDNVI---YTILINGYCRNGMMSEALEIRDKMLEQGCALDVVA 397
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +++ L K + A +F+E R + D LI +C+ G + KA +L
Sbjct: 398 YNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMT 457
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+ +P++ T+ ++ G+ + + EK E
Sbjct: 458 QKNIKPDIVTYNILIDGFCKTTEMEKANE 486
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 121/268 (45%), Gaps = 14/268 (5%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +LN K A + +M +RG+V + ++++ + + GN K SL M
Sbjct: 398 YNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMT 457
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+K I D T++IL+ ++ E +++ M R + + YA +GY G
Sbjct: 458 QKNIKPDIVTYNILIDGFCKTTEMEKANELWNEM-ISRKIFPNHISYAILVNGYCNLGFV 516
Query: 275 DKAL----AVLRKS--EVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
+A ++RK L+ N + Y + D+ L K + + +
Sbjct: 517 SEAFRLWDEMIRKGIKPTLVTCNTVIKGY----CRSGDLSKADEFL--GKMISEGVGPDS 570
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y +I+ +K + M+ A + + E++ L D+ N +++ +CR+G + +AE ++ K
Sbjct: 571 ITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRK 630
Query: 389 AQLRGTEPNVRTWYLMATGYL-QNNQSE 415
RG +P+ T+ + GY+ Q+N E
Sbjct: 631 MIERGIDPDRSTYTTLINGYVSQDNLKE 658
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 75/385 (19%), Positives = 151/385 (39%), Gaps = 46/385 (11%)
Query: 50 MYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWM 109
++ L +P +P S P D ++ E L++ ++R KR S A + + M
Sbjct: 40 LHTLENCQNPNQEPTSSAPP--DSFLVEKILLNLRRVR--------SKRLSDAQTLILRM 89
Query: 110 TKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFN-CVPEKLKLPSVYIALLNAYACAKSA 168
++S +++V+ +E S + C + L V+ L+ +Y A+
Sbjct: 90 IRRSG--------------VSRVEIVESLISMSSTCGVDNL----VFDLLIRSYVQARKL 131
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
+ + +R +G + NS++ + G + +E+ GI+ + YT +I+
Sbjct: 132 NEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIM 191
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM 288
++A + + + ME +G+ D Y T + Y + GL +A V
Sbjct: 192 VNALCKDHKIDDVKPFLIDME-QKGIFADIVTYNTLINAYCREGLLGEAFEV-------- 242
Query: 289 MHNKFSRAYDFVITQYAACGN----KDDVLRVWKRYKQNLKVYNRGYICVISSLL----K 340
M++ + + Y A N K +R + + L + ++LL +
Sbjct: 243 MNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCR 302
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
+ A+ IF + R + D+ + LI R G L +A + G P+
Sbjct: 303 NNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVI 362
Query: 401 WYLMATGYLQNNQSEKGVEAMKKAL 425
+ ++ GY +N + +E K L
Sbjct: 363 YTILINGYCRNGMMSEALEIRDKML 387
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 129/277 (46%), Gaps = 17/277 (6%)
Query: 144 CVPEKLK----LPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVY 197
C+ EK++ PS + ++ YA A + A + MR G V + YN++++
Sbjct: 534 CILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGL 593
Query: 198 YQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVL 256
+ ++ S++ +M GI +++T++I++ AA+ D G+ + + E+ G+ L
Sbjct: 594 VRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKES--GLKL 651
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDV 313
D +Y T K+G ALAV R+ M K R Y+ +I +A G+ +
Sbjct: 652 DVYIYETLLRACCKSGRMQSALAVTRE----MSFQKIPRNTFIYNILIDGWARRGDVWEA 707
Query: 314 LRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
+ K+ K++ N Y I++ K M+ AEK+ EE L +++ LI
Sbjct: 708 EDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKG 767
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
+ R L +A + +L G +P+ +++ + T L
Sbjct: 768 WARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLL 804
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 9/254 (3%)
Query: 162 YACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCD 221
YA A + MR RG+ + S+++ Y + + S + EM+ +G++
Sbjct: 307 YAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELT 366
Query: 222 KYTFSILLSACAAASDG------EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
T+SIL+S A +D E +++V ME D G+ VY + GY +
Sbjct: 367 IVTYSILISGFAKINDSHQSGNMERAEELVREMEED-GIDAPIDVYHSMMHGYTIIQNEN 425
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICV 334
K L V + + +Y ++ Y G L + K + +K N+ Y +
Sbjct: 426 KCLVVFERLKECGFKPSII-SYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSML 484
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I+ + +A IFEE L D I N LI+A+C+ G + +A ++ K Q
Sbjct: 485 INGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERM 544
Query: 395 EPNVRTWYLMATGY 408
+P+ R + + GY
Sbjct: 545 QPSNRAFRPIIEGY 558
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 105/270 (38%), Gaps = 36/270 (13%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY ++++ Y ++ K ++ +++++ G I Y ++N+Y + G K S+ EM
Sbjct: 410 VYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEM 469
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E GI + T+S+L++ D I M G+ D +Y + K G
Sbjct: 470 ESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM-LRSGLQPDRAIYNLLIEAFCKMGN 528
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
D+A+ +L K + M +RA+ +I YA G+
Sbjct: 529 MDRAICILEKMQKERMQPS-NRAFRPIIEGYAVAGD------------------------ 563
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
M+SA + + N LI R+ + +A +++ K + G
Sbjct: 564 ----------MKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAG 613
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
PN T+ ++ GY + K E K
Sbjct: 614 ITPNEHTYTIIMRGYAASGDIGKAFEYFTK 643
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
Query: 135 IEQAASYFNCVPEK-LKLPSVYIALLNAYACAKSA--EKAEIIMQQMRDRGLVKKTIDYN 191
I +A YF + E LKL VYI AC KS + A + ++M + + + T YN
Sbjct: 634 IGKAFEYFTKIKESGLKL-DVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYN 692
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
+++ + + G+ + + LM +M+E G+ + +T++ ++AC A D + +K++ M D
Sbjct: 693 ILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEM-VD 751
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKAL 278
G+ + Y T G+ + L D+AL
Sbjct: 752 VGLKPNVKTYTTLIKGWARVSLPDRAL 778
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 3/256 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ +L++AYA A+ A +++M+ GL + Y+ +++ + + + + D+L E
Sbjct: 300 VFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEA 359
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ K + +S ++ A + + E +++V ME D G+ VY + GY
Sbjct: 360 KTKLSSLNGIIYSNIIHAHCQSGNMERAEELVCEMEED-GIDAPIDVYHSMMHGYTIIQN 418
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYI 332
+K L V + + +Y ++ Y G L + K + +K N+ Y
Sbjct: 419 ENKCLVVFERLKECGFKPSII-SYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYS 477
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I+ + +A IFEE L D I N LI+A+C+ G + +A ++ K Q
Sbjct: 478 MLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKE 537
Query: 393 GTEPNVRTWYLMATGY 408
+P+ R + + GY
Sbjct: 538 RMQPSNRAFRPIIEGY 553
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 129/277 (46%), Gaps = 17/277 (6%)
Query: 144 CVPEKLK----LPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVY 197
C+ EK++ PS + ++ YA A + A + MR G V + YN++++
Sbjct: 529 CILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGL 588
Query: 198 YQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVL 256
+ ++ S++ +M GI +++T++I++ AA+ D G+ + + E+ G+ L
Sbjct: 589 VRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKES--GLKL 646
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDV 313
D +Y T K+G ALAV R+ M K R Y+ +I +A G+ +
Sbjct: 647 DVYIYETLLRACCKSGRMQSALAVTRE----MSFQKIPRNTFIYNILIDGWARRGDVWEA 702
Query: 314 LRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
+ K+ K++ N Y I++ K M+ AEK+ EE L +++ LI
Sbjct: 703 EDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKG 762
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
+ R L +A + +L G +P+ +++ + T L
Sbjct: 763 WARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLL 799
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 105/270 (38%), Gaps = 36/270 (13%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY ++++ Y ++ K ++ +++++ G I Y ++N+Y + G K S+ EM
Sbjct: 405 VYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEM 464
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E GI + T+S+L++ D I M G+ D +Y + K G
Sbjct: 465 ESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM-LRSGLQPDRAIYNLLIEAFCKMGN 523
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
D+A+ +L K + M +RA+ +I YA G+
Sbjct: 524 MDRAICILEKMQKERMQPS-NRAFRPIIEGYAVAGD------------------------ 558
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
M+SA + + N LI R+ + +A +++ K + G
Sbjct: 559 ----------MKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAG 608
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
PN T+ ++ GY + K E K
Sbjct: 609 ITPNEHTYTIIMRGYAASGDIGKAFEYFTK 638
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
Query: 135 IEQAASYFNCVPEK-LKLPSVYIALLNAYACAKSA--EKAEIIMQQMRDRGLVKKTIDYN 191
I +A YF + E LKL VYI AC KS + A + ++M + + + T YN
Sbjct: 629 IGKAFEYFTKIKESGLKL-DVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYN 687
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
+++ + + G+ + + LM +M+E G+ + +T++ ++AC A D + +K++ M D
Sbjct: 688 ILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEM-VD 746
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKAL 278
G+ + Y T G+ + L D+AL
Sbjct: 747 VGLKPNVKTYTTLIKGWARVSLPDRAL 773
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 129/277 (46%), Gaps = 17/277 (6%)
Query: 144 CVPEKLK----LPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVY 197
C+ EK++ PS + ++ YA A + A + MR G V + YN++++
Sbjct: 508 CILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGL 567
Query: 198 YQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVL 256
+ ++ S++ +M GI +++T++I++ AA+ D G+ + + E+ G+ L
Sbjct: 568 VRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKES--GLKL 625
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDV 313
D +Y T K+G ALAV R+ M K R Y+ +I +A G+ +
Sbjct: 626 DVYIYETLLRACCKSGRMQSALAVTRE----MSFQKIPRNTFIYNILIDGWARRGDVWEA 681
Query: 314 LRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
+ K+ K++ N Y I++ K M+ AEK+ EE L +++ LI
Sbjct: 682 EDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKG 741
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
+ R L +A + +L G +P+ +++ + T L
Sbjct: 742 WARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLL 778
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 3/256 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ +L++AYA A+ A +++M+ GL + Y+ +++ + + + + D+L E
Sbjct: 279 VFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEA 338
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ K + +S ++ A + + E +++V ME D G+ VY + GY
Sbjct: 339 KTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEED-GIDAPIDVYHSMMHGYTIIQN 397
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYI 332
+K L V + + +Y ++ Y G L + K + +K N+ Y
Sbjct: 398 ENKCLVVFERLKECGFKPSII-SYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYS 456
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I+ + +A IFEE L D I N LI+A+C+ G + +A ++ K Q
Sbjct: 457 MLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKE 516
Query: 393 GTEPNVRTWYLMATGY 408
+P+ R + + GY
Sbjct: 517 RMQPSNRAFRPIIEGY 532
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 107/270 (39%), Gaps = 36/270 (13%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY ++++ Y ++ K ++ +++++ G I Y ++N+Y + G K S+ EM
Sbjct: 384 VYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEM 443
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E GI + T+S+L++ D I M G+ D +Y + K G
Sbjct: 444 ESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM-LRSGLQPDRAIYNLLIEAFCKMGN 502
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
D+A+ +L K + M +RA+ +I YA G+ L L + R C
Sbjct: 503 MDRAICILEKMQKERMQPS-NRAFRPIIEGYAVAGDMKSAL-------DTLDLMRRSG-C 553
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
V + + N LI R+ + +A +++ K + G
Sbjct: 554 VPTVMTY--------------------------NALIHGLVRKHKVQRAVSVLDKMSIAG 587
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
PN T+ ++ GY + K E K
Sbjct: 588 ITPNEHTYTIIMRGYAASGDIGKAFEYFTK 617
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
Query: 135 IEQAASYFNCVPEK-LKLPSVYIALLNAYACAKSA--EKAEIIMQQMRDRGLVKKTIDYN 191
I +A YF + E LKL VYI AC KS + A + ++M + + + T YN
Sbjct: 608 IGKAFEYFTKIKESGLKL-DVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYN 666
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
+++ + + G+ + + LM +M+E G+ + +T++ ++AC A D + +K++ M D
Sbjct: 667 ILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEM-VD 725
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKAL 278
G+ + Y T G+ + L D+AL
Sbjct: 726 VGLKPNVKTYTTLIKGWARVSLPDRAL 752
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 152/367 (41%), Gaps = 22/367 (5%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+L + ++ G P D L +IK L + AL + + F L ++ +
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG-FQLNQVSYGTLINGV 174
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
K+ A + +L P+V Y +++A + +A + +M +G+
Sbjct: 175 CKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 234
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVA 246
+ Y++++ + G K+ L++EM K I+ + YT++IL+ A C E +
Sbjct: 235 VTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
M++A V D Y+T GY KA V LM Y +I +
Sbjct: 295 MLKA--CVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMS-LMGVTPDVHTYTILINGF-- 349
Query: 307 CGNK--DDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
C NK D+ L ++K Q V I SSL+ DG+ + +I W+ + HD
Sbjct: 350 CKNKMVDEALNLFKEMHQKNMVPG---IVTYSSLI--DGLCKSGRIPYVWDLIDEMHDRG 404
Query: 365 IP------NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
P + LID C+ G L +A L K + +G PN T+ ++ G + + +
Sbjct: 405 QPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQ 464
Query: 419 EAMKKAL 425
E + L
Sbjct: 465 EVFQDLL 471
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 159/360 (44%), Gaps = 22/360 (6%)
Query: 89 IIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAK--VQG-IEQAASYFNCV 145
II Y+ S A + MT K ADV LI ++G +++A N +
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTVKG----ISADVVTYSTLIYGFCIEGKLKEAIGLLNEM 260
Query: 146 PEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
K P+VY L++A ++A+ ++ M + I Y+++M+ Y+
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEV 320
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
KK + + M G+ D +T++IL++ C E ++ M + + +V Y+
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQ--KNMVPGIVTYS 378
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA----YDFVITQYAACGNKDDVLRVWK 318
+ G K+G ++ + MH++ A Y +I G+ D + ++
Sbjct: 379 SLIDGLCKSGRIPYVWDLIDE-----MHDRGQPANVITYSSLIDGLCKNGHLDRAIALFN 433
Query: 319 RYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
+ K Q ++ + ++ L K ++ A+++F++ ++ ++ N +ID +C++G
Sbjct: 434 KMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQG 493
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPS 437
LL +A T++ K + G P+ T+ ++ + +++ V KK ++E PS
Sbjct: 494 LLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDENGGNVGFDKKVWEIVEHKKGETPS 553
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 15/211 (7%)
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTV 260
+Y SL H +E KGI D +T +IL++ C + +++ RG D
Sbjct: 941 HYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILK--RGYHPDTIT 998
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVITQYAACGNKDDVLRVWKR 319
+ T +G G +KAL K +L + ++ +Y +I G+ +++ ++
Sbjct: 999 FTTLINGLCLKGQVNKALHFHDK--LLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRK 1056
Query: 320 Y-----KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
K ++ +YN +I +L K + A +F E + + D+ N LI +C
Sbjct: 1057 IDGRLTKPDVVMYNT----IIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFC 1112
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
G L +A L+ K L+ PNVRT+ ++
Sbjct: 1113 IVGKLKEAIGLLNKMVLKTINPNVRTYNILV 1143
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 96/221 (43%), Gaps = 7/221 (3%)
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVA 246
I +N +++ + + +Y SL H +E KGI D T +IL++ C G +
Sbjct: 60 IQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAK 119
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVITQYA 305
+++ RG D T G G KAL K +L + ++ +Y +I
Sbjct: 120 ILK--RGYPPDTVTLNTLIKGLCLKGQVKKALHFHDK--LLAQGFQLNQVSYGTLINGVC 175
Query: 306 ACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
G+ +++ ++ L N Y +I +L K+ + A +F E + + D+
Sbjct: 176 KIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 235
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
+ LI +C G L +A L+ + L+ PNV T+ ++
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILV 276
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 108/258 (41%), Gaps = 43/258 (16%)
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGE 239
+G+ N ++N + G S++ ++ ++G D TF+ L++ C +
Sbjct: 955 KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014
Query: 240 GI---DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE----------- 285
+ DK++A +G L+ Y T +G K G + A+ +LRK +
Sbjct: 1015 ALHFHDKLLA-----QGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMY 1069
Query: 286 -----VLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLK 340
L H S+AY + G DV+ N +Y C++ L
Sbjct: 1070 NTIIDALCKHQLVSKAYGLFF-EMNVKGISADVVTY------NTLIYG---FCIVGKL-- 1117
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG--LLHKAETLIYKAQLRGTEPNV 398
+ A + + + + ++R N L+DA C+ G LL ++ +++ K + G + N
Sbjct: 1118 ----KEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANA 1173
Query: 399 RTWYLMATGYLQNNQSEK 416
T+ ++ + + ++++K
Sbjct: 1174 VTFEIIISALFEKDENDK 1191
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 133/299 (44%), Gaps = 11/299 (3%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+++A + + EK PSV + +++ AY+ A + A + M GLV + +S
Sbjct: 469 LDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSS 528
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
M+ + G ++ L+++M +KG+ +K F++LL D G + MEA R
Sbjct: 529 MLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEA-R 587
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKD 311
G+ D ++ G KAGL ++A + S+ + N F Y+ +I CG
Sbjct: 588 GICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNF--VYNSLIHGLCNCGKLH 645
Query: 312 DVLRVWKRYKQN---LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
+ L++ + +Q ++ I I+ K M+SA F E + D N
Sbjct: 646 EALKLEREMRQKGLLPDIFTTNII--INGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNT 703
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVL 427
LI YC+ + A+ + K G +P++ T+ + G+ + + + V + + + +
Sbjct: 704 LIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAV 762
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 162/411 (39%), Gaps = 69/411 (16%)
Query: 38 REVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEG-RPLDMEQLRIIIKKF--R 94
REV + S++ L+R+L +GD S+ LL + +G RP + I+I F +
Sbjct: 235 REVGVR-PSSSAISILFRLLLRVGD-YGSVWKLLRGMIRDGPRPCN-HNFNIMILCFCQK 291
Query: 95 LYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIA-KVQGIEQAASYF-------NCVP 146
Y R + +L M F P A + + A +++G A F C P
Sbjct: 292 GYLRVAESLLFVM-----PKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKP 346
Query: 147 EKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKL 206
+ ++ A N + +A I + +++ GL YN++M+ Y++ + +
Sbjct: 347 SLITFSTIITAFCNE----GNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQA 402
Query: 207 DSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME-ADRGVVLDWTVYATAA 265
+ L EM +KGI D TF+IL++ G+ D + + +V D ++Y +
Sbjct: 403 NMLYEEMRDKGIAPDGATFNILVA--GNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSV 460
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWK---- 318
+G AG D+A+ L M+ A++ VI Y+ G +D+ + +K
Sbjct: 461 AGLCWAGQLDEAMQFLED----MLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLM 516
Query: 319 -----------------------------RYK---QNLKVYNRGYICVISSLLKFDGMES 346
YK + L V + ++ K
Sbjct: 517 FGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAG 576
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
A ++ E E+R +C D + ID + GL+ +A + +G PN
Sbjct: 577 AHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPN 627
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 96/216 (44%), Gaps = 8/216 (3%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
LL + +++G P++ +++ + +K A S+W ++ + P +A +D
Sbjct: 545 LLYKMIDKGLPVNKVAFTVLLDGY--FKVGDTAGAHSLWYEMEARGI-CPDAIAFSAFID 601
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
++K +E+A F+ + +K +P+ VY +L++ +A + ++MR +GL+
Sbjct: 602 GLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLP 661
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
N ++N + + G K EM G+ D T++ L+ D D+ +
Sbjct: 662 DIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFL 721
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL 281
M A G D T Y G+ + +A+ +L
Sbjct: 722 NKMYAS-GWDPDITTYNIRIQGFCSSQKISRAVTML 756
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 130/298 (43%), Gaps = 11/298 (3%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I +D ++ GI +A + + E+ PSV + L+N + +A +++ +R +
Sbjct: 521 IMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLK 580
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
GLV + Y ++MN Y + GN +++ +HEME + T+++L+ +
Sbjct: 581 GLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHES 640
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN--KFSRAYDF 299
+++ M A +G++ D Y T + K KAL + ++++HN Y
Sbjct: 641 LQLLEYMYA-KGLLPDSVTYNTIIQCFCKGKEITKALQLY---NMMLLHNCDPTQVTYKV 696
Query: 300 VITQYAACGNKDDVLR-VWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
+I G+ DV R V +N+ + Y+ +I + + A F + ++
Sbjct: 697 LINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKG 756
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ--NNQS 414
IR + +I+ C+RGL+ +A+ G P+ + + Q NN S
Sbjct: 757 FVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSS 814
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 106/244 (43%), Gaps = 9/244 (3%)
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS 230
A ++Q+M +GL + Y +++ + Q GN ++ L E +G + +++LLS
Sbjct: 360 ARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLS 419
Query: 231 ACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL--M 288
E + ME R + D+ VY+ G K G +A + + +
Sbjct: 420 CLCKVGRIEEALTLFDEMETLR-LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKF 478
Query: 289 MHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK--QNLKVYNRGYICVISSLLKFDGMES 346
H+ RA + + + W R +++ +YN +I ++ DG+
Sbjct: 479 PHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYN----IMIDGYVRLDGIAE 534
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
A +++ + R + + N LI+ +CRRG L +A ++ +L+G P+V T+ +
Sbjct: 535 AMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMN 594
Query: 407 GYLQ 410
Y +
Sbjct: 595 AYCE 598
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 149/344 (43%), Gaps = 17/344 (4%)
Query: 64 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA 123
+D++ LL + E G D ++K R AL + M KKS +P V+
Sbjct: 171 DDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGC-SPNVVS 229
Query: 124 IR--LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMR 179
+ + + +A + F+ + ++ +P V Y + ++A A++ +KAE++++QM
Sbjct: 230 YNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMI 289
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILLSACAAASDG 238
G + YN M++ Y G +K+ + EM +G+ D +T S + S C
Sbjct: 290 SNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSK 349
Query: 239 EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE---VLMMHNKFSR 295
E + +M A +G D Y+ GY G L + E ++ H+
Sbjct: 350 EAAEFFDSM--AAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHS---- 403
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEW 354
Y+ +I Y G D+ + ++ + ++ + + Y VI++ + + A F +
Sbjct: 404 VYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQM 463
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG-TEPN 397
+ L D + N LI +C G L KA+ LI + RG PN
Sbjct: 464 IAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPN 507
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 138/339 (40%), Gaps = 24/339 (7%)
Query: 136 EQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
++AA +F+ + K P + Y LL+ YA + M G+V YN +
Sbjct: 349 KEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNIL 408
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADR 252
++ Y + G + + +M+E+G+ D +T+ +++A + + +DK M+
Sbjct: 409 IDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAM-- 466
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA----YDFVITQYAACG 308
G+ D VY + G+ G KA ++ + MM R ++ +I G
Sbjct: 467 GLKPDTIVYNSLIQGFCMHGNLVKAKELISE----MMSRGIPRPNTVFFNSIINSLCKEG 522
Query: 309 NKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDG----MESAEKIFEEWESRNLCHDIR 364
V+ + + + R + +SL+ G ME A + + S + D+
Sbjct: 523 R---VVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVV 579
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
+ L+D YCR G + L + +G +P T+ ++ G + ++ V A K
Sbjct: 580 TYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRT---VGAKKMC 636
Query: 425 LVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKL 463
++E+GT S C G + D E F KL
Sbjct: 637 HEMIESGTTMDIST-CGIILGGLCRNNCDDEAIALFKKL 674
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 96/237 (40%), Gaps = 35/237 (14%)
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
G + YN++++ +++ G K +L HEM ++G+ D T+S + A A +
Sbjct: 222 GCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKA 281
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS----------------E 285
+ ++ M ++ G D Y GY G + + R+
Sbjct: 282 ELVLRQMISN-GFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMS 340
Query: 286 VLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGM 344
L H K A +F AA G+K D++ Y L Y GY+ + +L
Sbjct: 341 SLCKHGKSKEAAEF-FDSMAAKGHKPDLVT----YSVLLHGYAAEGYVVDMLNL------ 389
Query: 345 ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
F E + D + N LIDAY +RG++ +A + + Q RG P+ T+
Sbjct: 390 ------FNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTY 440
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 96/249 (38%), Gaps = 46/249 (18%)
Query: 166 KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF 225
+S + +++ +M + G+ TI Y++++ + ++ L+H M +K C
Sbjct: 169 RSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVV 228
Query: 226 SILLSACAAASDGE---GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR 282
S +GE + MM+ +GVV D Y++ KA DKA VLR
Sbjct: 229 SYNTVIHGFFREGEVSKACNLFHEMMQ--QGVVPDVVTYSSYIDALCKARAMDKAELVLR 286
Query: 283 KSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLL 339
+ M+ N F Y+ +I Y+ G WK
Sbjct: 287 Q----MISNGFEPDKVTYNCMIHGYSILGQ-------WK--------------------- 314
Query: 340 KFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVR 399
E+A +F E R L DI N + + C+ G +A +G +P++
Sbjct: 315 -----ETA-GMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLV 368
Query: 400 TWYLMATGY 408
T+ ++ GY
Sbjct: 369 TYSVLLHGY 377
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 121/277 (43%), Gaps = 25/277 (9%)
Query: 153 SVYIALLNAYACAKS-AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
+VY +++ A C K A +++ M G+ + + ++++ + G+ L
Sbjct: 323 TVYTSVI-ALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFE 381
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
EM+++G+ D+ T + L++ A + + D+++ M D+G+ +D Y GY K
Sbjct: 382 EMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEM-VDKGLDVDVVTYTVLIDGYCKR 440
Query: 272 GLSDKALAVLRKSEVLMMHNKF--SRAYDFVITQYAA----CGNKD-----DVLRVWKRY 320
G E +HN+ R V+T A C D ++L
Sbjct: 441 G---------NMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNK 491
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
L VY Y +I+ L KF +E A +I E E+ D+ LID C+ G
Sbjct: 492 GLELNVYT--YNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFD 549
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+A ++ + +G +P++ T+ ++ G+ + + E G
Sbjct: 550 RAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGG 586
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 31/263 (11%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ +++ + A + ++M+ RGL + + +++N + G K+ D ++ EM
Sbjct: 359 VFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEM 418
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--------DRGVVLDWTVYATAA 265
+KG+D D T+++L+ +G K M+EA R V + Y +
Sbjct: 419 VDKGLDVDVVTYTVLI---------DGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALS 469
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYDFVITQYAACGNKDDVLRVWKRYK 321
G K G A +L + M NK Y+ +I GN + +R+ +
Sbjct: 470 DGLCKQGDVRAANELLHE-----MCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEME 524
Query: 322 ---QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
VY Y +I +L K + A + +E + + I N L++ +C G
Sbjct: 525 AAGHRTDVYT--YTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGR 582
Query: 379 LHKAETLIYKAQLRGTEPNVRTW 401
+ + L+ + PNV T+
Sbjct: 583 VEGGKKLLEWMLEKNVRPNVVTY 605
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 121/281 (43%), Gaps = 38/281 (13%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
++KV +E++ YF + E+ LP+ Y L++ Y E AE ++Q+M D GL
Sbjct: 407 LSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPN 466
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ Y ++ Y+++ + +K+ S M ++G+ D + IL+ +++ + E ++++
Sbjct: 467 DVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLS 526
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
+E + G V D VY++ SG K +KA +L ++ S+
Sbjct: 527 EIEKN-GSVPDVHVYSSLISGLCKTADREKAFGIL---------DEMSK----------- 565
Query: 307 CGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
K N+ YN +I L K + A +F ++ L +
Sbjct: 566 -----------KGVDPNIVCYN----ALIDGLCKSGDISYARNVFNSILAKGLVPNCVTY 610
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
LID C+ G + A L + G P+ + ++ TG
Sbjct: 611 TSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 651
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 123/280 (43%), Gaps = 15/280 (5%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P VY L+ AY + + A+ ++ +MR+RG T+ YN ++ ++G ++
Sbjct: 115 PDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 174
Query: 210 MHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ME+ G+ D +T+ L++ C + E + M A+ + + VYA G+
Sbjct: 175 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAE--LKPNVVVYANLIDGF 232
Query: 269 VKAGLSDKALAVLRKSEVLMMH-NKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
++ G +D+A ++++ + NK + YD ++ G D R KQ ++
Sbjct: 233 MREGNADEAFKMIKEMVAAGVQPNKIT--YDNLVRGLCKMGQMD---RASLLLKQMVRDS 287
Query: 328 NRG----YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
+R Y +I + + A ++ E E+ + ++ + +I C+ G KA
Sbjct: 288 HRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 347
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
L+ + +G +PN + + +GY + E K
Sbjct: 348 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDK 387
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 103/260 (39%), Gaps = 40/260 (15%)
Query: 151 LPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
LP +Y +L+ + E++ QM++RGL+ Y+ +++ Y + G+ + +
Sbjct: 394 LPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQ 453
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
L+ M + G+ + + LL + + D E + M D+GV+LD
Sbjct: 454 LVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM-LDQGVMLD----------- 501
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
+R Y +I ++ GN + RV ++N V +
Sbjct: 502 -------------------------NRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPD 536
Query: 329 -RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y +IS L K E A I +E + + +I N LID C+ G + A +
Sbjct: 537 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 596
Query: 388 KAQLRGTEPNVRTWYLMATG 407
+G PN T+ + G
Sbjct: 597 SILAKGLVPNCVTYTSLIDG 616
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 130/341 (38%), Gaps = 47/341 (13%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK------------------------- 186
P+V L++ Y + + A ++ MRDRGL
Sbjct: 47 PAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVRE 106
Query: 187 ----------TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
Y++++ Y + + ++ EM E+G + T+++L++ +
Sbjct: 107 FMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG 166
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA 296
E ME D G+V D Y +G K+ S++A A+L + +
Sbjct: 167 AVEEAFGFKKDME-DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVV-V 224
Query: 297 YDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
Y +I + GN D+ ++ K ++ Y ++ L K M+ A + ++
Sbjct: 225 YANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 284
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+ D N +I+ + R A L+ + + G PNV T+ +M G Q+ + E
Sbjct: 285 RDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPE 344
Query: 416 KGVEAMKKALVLLEAGTR--WKPSKECLAACLGYYKKERDI 454
K + LLE T KP+ A + Y +E ++
Sbjct: 345 KASD-------LLEEMTTKGLKPNAFVYAPLISGYCREGNV 378
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 141/302 (46%), Gaps = 23/302 (7%)
Query: 131 KVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
+V ++ A S N +PEK + + + L++ Y + E AE + QM VK I +
Sbjct: 954 QVLDMDSANSLANQMPEKNE--ATWNCLIDGYTRLGNLELAESLFNQMP----VKDIISW 1007
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA 250
+M+N Y + Y++ ++ ++M E+GI D+ T S ++SACA E I K V M
Sbjct: 1008 TTMINGYSRNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLE-IGKEVHMYTV 1066
Query: 251 DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK 310
G VLD + + Y K G ++AL V L N F ++ +I AA G
Sbjct: 1067 QNGFVLDVYIGSALVDMYSKCGSLERALLVFFN---LPKKNLF--CWNSIIEGLAAHGFA 1121
Query: 311 DDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
+ L+++ + + +++K ++ V ++ +E +I+ R++ D I +++
Sbjct: 1122 QEALKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEEGRRIY-----RSMIDDYSIVSNV 1176
Query: 370 IDAYCRRGLLHKAETLIYKA-QLRGT---EPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
C L KA LIY+A +L G+ EPN W + G + E A K +
Sbjct: 1177 EHYGCMVHLFSKA-GLIYEALELIGSMEFEPNAVIWGALLDGCRIHKNLEIAEIAFNKLM 1235
Query: 426 VL 427
+L
Sbjct: 1236 IL 1237
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 146/340 (42%), Gaps = 58/340 (17%)
Query: 136 EQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
++A FN + E+ P++ Y LL A K + ++ ++ GL ++ +N+M
Sbjct: 88 QEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFNAM 147
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
+N + ++GN K+ + +M+++G TF+ L+ A E K++ +M +
Sbjct: 148 INAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEEN 207
Query: 254 V----------VLDW-----------TVYATAASG--------------YVKAGLSDKAL 278
V + W VY AASG Y + G + +A
Sbjct: 208 VKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRAE 267
Query: 279 A-VLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYN---R 329
+L +M N+ R +I Y G D LR R + NL ++N +
Sbjct: 268 GMILEMQNNRVMPNE--RTCGIIINGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIK 325
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
G++ + + DG++ A + EE+ + D+ + +++A+ GL+ K + +
Sbjct: 326 GFLDITDT----DGVDEALTLMEEFGVK---PDVVTFSTIMNAWSSVGLMDKCQEIFDDM 378
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKG---VEAMKKALV 426
G EP++ + ++A GY++ + EK + AM K+ V
Sbjct: 379 VKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGV 418
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 131/311 (42%), Gaps = 52/311 (16%)
Query: 149 LKLPSVYI-ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLD 207
LK SV+ A++NA++ + + ++A I ++M+DRG T +N+++ Y G ++
Sbjct: 137 LKPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECL 196
Query: 208 SLMHEM-EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAA 265
L+ M +E+ + + TF+ L+ A C E + + M A G+ D Y T A
Sbjct: 197 KLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKM--AASGLQPDVVTYNTLA 254
Query: 266 SGYVKAGLSDKALA-VLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-- 322
Y + G + +A +L +M N+ R +I Y G D LR R +
Sbjct: 255 RAYAQNGETSRAEGMILEMQNNRVMPNE--RTCGIIINGYCKEGKMKDALRFLYRMRNYG 312
Query: 323 ---NLKVYN---RGYICVISSLLKFDGMESAEKIFEE----------------WESRNL- 359
NL ++N +G++ + + DG++ A + EE W S L
Sbjct: 313 VHPNLVIFNSLIKGFLDITDT----DGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVGLM 368
Query: 360 --CH-------------DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
C DI + L Y R G KAE+L+ G +PNV + +
Sbjct: 369 DKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTI 428
Query: 405 ATGYLQNNQSE 415
+G+ + E
Sbjct: 429 ISGWCSAGKME 439
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 103/256 (40%), Gaps = 3/256 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L AYA +AE ++ +M++ ++ ++N Y + G K ++ M
Sbjct: 249 TYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYRM 308
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
G+ + F+ L+ +D +G+D+ + +ME + GV D ++T + + GL
Sbjct: 309 RNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLME-EFGVKPDVVTFSTIMNAWSSVGL 367
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYI 332
DK + + A+ + Y G + + K ++ +
Sbjct: 368 MDKCQEIFDDMVKAGIEPDI-HAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFT 426
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+IS ME A +++E+ +C +++ LI Y KAE L+ + +
Sbjct: 427 TIISGWCSAGKMEYASRVYEKMCEMGICPNLKTFETLIWGYGEAKEPQKAEELLQIMEQK 486
Query: 393 GTEPNVRTWYLMATGY 408
G P T L+A +
Sbjct: 487 GVAPVKSTIQLVADAW 502
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 120/273 (43%), Gaps = 7/273 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++ L++ E A ++++M G V + NS+M Y G K+ + H M
Sbjct: 112 IFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLM 171
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKA 271
KG+ D Y++SI ++ E ID+ + + + + RGVV + Y T +A
Sbjct: 172 VSKGLKPDVYSYSIFINGYCKV---EKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQA 228
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRG 330
A + RK + AY ++ + GN D++L +++ ++ L K
Sbjct: 229 LRPRDAQVLFRKMCACGLSPDI-LAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVV 287
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I+ + + ++ A+++ L D+ L+D CR G + +A L K +
Sbjct: 288 YTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKME 347
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G P ++ ++ G LQ+N + V+ + +
Sbjct: 348 EDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHE 380
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 116/295 (39%), Gaps = 52/295 (17%)
Query: 175 MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CA 233
+M DR I++N +++ + Y+ + SL EME +GI + T SIL++ C
Sbjct: 28 FNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCF 87
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL------ 287
G ++ RG D ++ T G + G ++ A +L++ ++
Sbjct: 88 LHHVDYGFSVFGKTLK--RGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDV 145
Query: 288 MMHNKFSRAYDFVITQYAACGNKDDVLRVWK-RYKQNLKVYNRGYICVISSLLKFDGMES 346
+ N R Y + G D V +++ + LK Y I+ K + ++
Sbjct: 146 VTCNSLMRGY-------CSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDE 198
Query: 347 AEKIFEEWESRN--------------LCH---------------------DIRIPNHLID 371
A ++F+E R LC DI + L+D
Sbjct: 199 AMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLD 258
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
+C++G L + L + Q R +P++ + ++ G ++ + + E + + +V
Sbjct: 259 GFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIV 313
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 151/362 (41%), Gaps = 54/362 (14%)
Query: 99 FSHALQISMWMTKKSNFVLTPADVAIR--LDLIAKVQGIEQAASYFNCVPEKLKLPS--V 154
FS A +I M ++ + P V+ + + ++ + ++QA YF + + +P +
Sbjct: 239 FSEAKEIFGEMLRQG---VVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVI 295
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ Y + +A I +M ++G V I YN+++N + D L EM
Sbjct: 296 YTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMV 355
Query: 215 EKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E+G D YTF+ L+ C + + + M + R + D Y T G+ K G
Sbjct: 356 ERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQ--RNIKPDIVAYNTLIDGFCKVGE 413
Query: 274 SDKALAV---LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLK 325
+KA + + ++ H Y +I Y + G+ + R+W K K L
Sbjct: 414 MEKASELWDGMISRKIFPNH----ITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLV 469
Query: 326 VYN---RGYI----------------------------CVISSLLKFDGMESAEKIFEEW 354
N +GY +I+ ++ D M+ A +
Sbjct: 470 TCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKM 529
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL-QNNQ 413
E L DI N +++ +CR+G + +AE ++ K +G P+ T+ + G++ Q+N
Sbjct: 530 EKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNL 589
Query: 414 SE 415
+E
Sbjct: 590 NE 591
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 119/272 (43%), Gaps = 15/272 (5%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+ AY E+A IM M D+GL YN+++N + G Y + ++ EM
Sbjct: 156 YNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML 215
Query: 215 EKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
G+ D T+ ++L+ +C + E + M+ +GVV D +++ + + +
Sbjct: 216 NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLR--QGVVPDLVSFSSLIAVFSRNRH 273
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQ-----YAACGNKDDVLRVW-KRYKQNLKVY 327
D+AL R + KF D VI Y GN + L++ + +Q +
Sbjct: 274 LDQALVYFRDMK------KFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLD 327
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y +++ L K + A+K+F+E R D LI +C+ G + KA +L
Sbjct: 328 VIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFG 387
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
R +P++ + + G+ + + EK E
Sbjct: 388 TMTQRNIKPDIVAYNTLIDGFCKVGEMEKASE 419
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 133/325 (40%), Gaps = 40/325 (12%)
Query: 124 IRLDLIAKVQGIEQAASYF--NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDR 181
IR +++V+ +E S NC L V+ L+ Y A+ + + +R +
Sbjct: 22 IRRSGVSRVEVVEALVSSMCGNCGTNNL----VFDLLIRTYVQARKLREGTEAFRILRSK 77
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLD------SLMHEMEEKGIDCDKYTFSILLSACAAA 235
G + NS++ G K+D + E+ GI+ + YT +I+++A
Sbjct: 78 GYLVSINACNSLL------GGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKD 131
Query: 236 SDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFS 294
+ + ++ ME + G+ D Y T Y + GL ++A ++ ++ + + F+
Sbjct: 132 GKFDDVKSFLSEMEGN-GIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFT 190
Query: 295 RAYDFVITQYAACGNKDDVLRVWKRYKQNL-KVYNRG-------YICVISSLLKFDGMES 346
Y+ +I G + R K L ++ N G Y ++ + D
Sbjct: 191 --YNAIINGLCKKGR-------YARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSE 241
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
A++IF E + + D+ + LI + R L +A + G P+ + ++
Sbjct: 242 AKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMH 301
Query: 407 GYLQNNQSEKGVEAMKKALVLLEAG 431
GY +N +EA+K +LE G
Sbjct: 302 GYCRNGNM---LEALKIRDEMLEQG 323
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 117/263 (44%), Gaps = 17/263 (6%)
Query: 151 LPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
LP V Y +LLN Y A + ++A ++ +R GL + YN ++ Y + G+ ++
Sbjct: 342 LPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARI 401
Query: 209 LMHEMEEKGIDCDKYTFSIL----LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
L EM E+G + T++IL L+ C+ A E D++++ +G+ D Y T
Sbjct: 402 LKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLS-----KGLQPDCFAYNTR 456
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC--GNKDDVLRVWKRYKQ 322
+ G +AL + EVLM+ S + I + C GN D + +
Sbjct: 457 ICAELILGDIARALEL---REVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVS 513
Query: 323 N-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
N L+ Y C+I + + + A KIF S L +I AYCRRG L+
Sbjct: 514 NGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYS 573
Query: 382 AETLIYKAQLRGTEPNVRTWYLM 404
A K G EPN T+ ++
Sbjct: 574 AYGWFRKMLEEGVEPNEITYNVL 596
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 99/246 (40%), Gaps = 53/246 (21%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC--DKYTFSILLSA 231
+ ++M G+ + YN++++ + + G K+ L+ EME +G C + T++++++
Sbjct: 191 VHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITG 250
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
D E ++V M LS KA
Sbjct: 251 LTRKGDLEEAAELVEGMR-----------------------LSKKA-------------- 273
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-------YICVISSLLKFDGM 344
S Y+ +IT A G V K Y L++ N G Y +I LL+ +
Sbjct: 274 -SSFTYNPLITGLLARGC------VKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLV 326
Query: 345 ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
E+A+ F E + L D+ N L++ YC+ G L +A L + G P V T+ +
Sbjct: 327 EAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIR 386
Query: 405 ATGYLQ 410
GY +
Sbjct: 387 IDGYCR 392
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 110/290 (37%), Gaps = 9/290 (3%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
IR+D ++ +E+A + E+ LP+V Y L+ S A +M +
Sbjct: 385 IRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSK 444
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
GL YN+ + G+ + L + +GI D T++IL+ + +
Sbjct: 445 GLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDA 504
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVI 301
++ M ++ G+ D Y + + GL +A + ++ A F +
Sbjct: 505 KELQMKMVSN-GLQPDCITYTCLIHAHCERGLLREARKIFNN---MISDGLLPSAVTFTV 560
Query: 302 TQYAAC--GNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
+A C GN +++ ++ ++ Y +I +L + + A F E R
Sbjct: 561 IIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERG 620
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
L + LID C+ G A ++ G P+ T + G+
Sbjct: 621 LVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 22/277 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY L+ AYA E+A ++ M G+ YN++++ + G ++ + + E+
Sbjct: 475 VYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 534
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--------DRGVVLDWTVYATAA 265
+ +G+ D TF + G K M EA D G++ + +Y
Sbjct: 535 QGRGLKPDAVTFGAFIL---------GYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLI 585
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK 325
+G+ KAG +AL++ R+ L + F I G + L+V+ K+
Sbjct: 586 NGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAF-IHGLLKNGRVQEALKVFSELKEKGL 644
Query: 326 VYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
V + Y +IS K +E A ++ +E + + +I I N L+D C+ G + +A
Sbjct: 645 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARK 704
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
L +G EP+ T+ M GY +SE EA
Sbjct: 705 LFDGMPEKGLEPDSVTYSTMIDGYC---KSENVAEAF 738
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 121/292 (41%), Gaps = 24/292 (8%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
N VP + Y A++N K A ++++M GL + Y+ ++ Y G
Sbjct: 433 NLVPSAVS----YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGR 488
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
++ L+ M G+ D + ++ ++S + A E + ++ RG+ D +
Sbjct: 489 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG-RGLKPDAVTFG 547
Query: 263 TAASGYVKAGLSDKALAVLRK--SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
GY K G +A + LM +N Y +I + GN + L +++R
Sbjct: 548 AFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL---YTVLINGHFKAGNLMEALSIFRRL 604
Query: 321 KQNLKVYNRGYIC--VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
L V C I LLK ++ A K+F E + + L D+ + LI +C++G
Sbjct: 605 -HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 663
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGY-----------LQNNQSEKGVE 419
+ KA L + L+G PN+ + + G L + EKG+E
Sbjct: 664 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 715
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 128/294 (43%), Gaps = 15/294 (5%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+++A F+ + EK +P V Y +L++ + EKA + +M +G+ YN+
Sbjct: 629 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 688
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEAD 251
+++ ++G+ ++ L M EKG++ D T+S ++ C + + E M
Sbjct: 689 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM--PS 746
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF--VITQYA-ACG 308
+GV VY G K G +KA+ + R+ M+ F+ F +I Y +C
Sbjct: 747 KGVQPHSFVYNALVHGCCKEGDMEKAMNLFRE----MLQKGFATTLSFNTLIDGYCKSCK 802
Query: 309 NKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
++ + + + + Y VI K ME A +F+E + RNL D
Sbjct: 803 IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTS 862
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
L+ Y + G + L K +G +P+ T+ L+ + + + VEA K
Sbjct: 863 LMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNL---VEAFK 913
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 134/304 (44%), Gaps = 12/304 (3%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSA--EKAEIIMQQMRDRGL 183
+D K + + +A S F+ +P K P ++ + C K EKA + ++M +G
Sbjct: 725 IDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF 784
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
T+ +N++++ Y ++ ++ L EM K I D T++ ++ A E +
Sbjct: 785 A-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 843
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ 303
+ M+ +R +++D Y + GY K G S + A+ K V Y VI
Sbjct: 844 LFKEMQ-ERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKM-VAKGVKPDEVTYGLVI-- 899
Query: 304 YAACGNKDDVLRVWKRYKQNL--KVYNRGYI--CVISSLLKFDGMESAEKIFEEWESRNL 359
YA C +D+++ +K + + + +G I +I++L K + + A K+ +E L
Sbjct: 900 YAHC-KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGL 958
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+ N L+ ++ G + +A + + G P+ T + G L + SE
Sbjct: 959 KPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARN 1018
Query: 420 AMKK 423
+K+
Sbjct: 1019 LIKQ 1022
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 137/347 (39%), Gaps = 44/347 (12%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+ A A+ ++ +M ++GL Y+ ++ Q G+ + L M
Sbjct: 231 YTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMG 290
Query: 215 EKGIDCDKYTFSILLS----------------------------ACAAASDG---EG-ID 242
EKG+ + YT++I+ + AC+A DG EG ID
Sbjct: 291 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 350
Query: 243 KIVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
+++ + + G+ ++ Y G K G +KA +L K V + SR + +
Sbjct: 351 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEIL-KGMVTLGCKPNSRTFCLL 409
Query: 301 ITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
I Y N L + K+NL Y +I+ L + A K+ E+ L
Sbjct: 410 IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 469
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
++ + + LI AY G + +A L+ G P++ + + + + + E+
Sbjct: 470 KPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA-- 527
Query: 420 AMKKALVLLE-AGTRWKPSKECLAA-CLGYYKKERDIEGADYFIKLL 464
+ LLE G KP A LGY K + E A YF ++L
Sbjct: 528 ----STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 570
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 117/274 (42%), Gaps = 9/274 (3%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P V+ L+++Y ++A + ++ ++ I NS++ + G + + +
Sbjct: 158 PVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYN 217
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
M + + D YT++ L+ A D G +++ M+ ++G+ + +Y+ G +
Sbjct: 218 GMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMD-EKGLNPNEFIYSLVIEGMCQV 276
Query: 272 GLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNK---DDVLRVWKRYKQNLKVY 327
G D+A+ + R E ++ N Y + I C K + L + K LK
Sbjct: 277 GDIDEAVELKRSMGEKGLVPN----TYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPD 332
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
+I ++ ++ +I + S + ++ N LI C+ G + KA ++
Sbjct: 333 YNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILK 392
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
G +PN RT+ L+ GY + + + +E +
Sbjct: 393 GMVTLGCKPNSRTFCLLIEGYCREHNMGRALELL 426
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 135/343 (39%), Gaps = 77/343 (22%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY +L+N +A + +M +G+ I YNS+++ + G +K+ +M
Sbjct: 116 VYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQM 175
Query: 214 EEKGIDCDKYTFSILLSACAAAS--------------DGEG------------------I 241
+GI D TF+ L+ + GE +
Sbjct: 176 VGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQM 235
Query: 242 DKIVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV------------- 286
D V + E +RG+ +D Y T +GY +G +++A+ + RK +
Sbjct: 236 DHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTIL 295
Query: 287 --LMMHNKFSRAYDFVITQYAACGNKD----------------------DVLRVWK--RY 320
+ N R + CG DV R K +Y
Sbjct: 296 LKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKY 355
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
K ++++Y+ +I + + ESA +IF+E + L +I N +I+ C+ G L
Sbjct: 356 KPSIRIYS----ILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLL 411
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+AE L + + G E + ++ + G+LQ NQ +K +E +K+
Sbjct: 412 EAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKR 454
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 96/240 (40%), Gaps = 36/240 (15%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ ++M + G+ I Y+S++N + G ++ +L EM +GI + T++ L+ A
Sbjct: 101 MFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASC 160
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF 293
+ + + M + G++ D + T K G +A +
Sbjct: 161 RFGLWKEATRTFSQMVGE-GILPDVVTFTTLIDHLSKKGKVQEAYKI------------- 206
Query: 294 SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEE 353
++ +I Q A N+ YN +++ L M+ A ++FE
Sbjct: 207 ---FELMIKQGEA---------------PNIVTYNS----LLNGLCLHHQMDHAVRLFEV 244
Query: 354 WESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
R + D+ N LI+ YC G +A TL K Q P++ T+ ++ QN +
Sbjct: 245 MVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGR 304
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 118/274 (43%), Gaps = 12/274 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y +L+ K KA ++ +M+ G++ I Y +++ ++ L M
Sbjct: 384 TYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMM 443
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
E+ G+ D++ +++L A C A E IV +GV L Y T G+ KAG
Sbjct: 444 EQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR-----KGVALTKVYYTTLIDGFSKAG 498
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK--DDVLRVWKRYK-QNLKVYNR 329
+D A ++ E ++ +Y + + +A C K ++ L + + + +K
Sbjct: 499 NTDFAATLI---ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIF 555
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +I +L+ + A++++ E S I++YC+ G L AE LI K
Sbjct: 556 AYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKM 615
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ G P+V T+ ++ G ++ +K+
Sbjct: 616 EREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKR 649
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 102/253 (40%), Gaps = 37/253 (14%)
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS 230
A ++ M G+V + YN+M+ Y + G + ME+ G D +T++ L+
Sbjct: 192 ARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIY 251
Query: 231 ACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH 290
E + + ++ G + +GY A D AL + K MM
Sbjct: 252 GLCDQKTEEAEELLNNAVK--EGFTPTVVTFTNLINGYCMAEKFDDALRMKNK----MMS 305
Query: 291 NKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKI 350
+K K +L+V+ + +I+SL+K D ++ A+++
Sbjct: 306 SKC---------------------------KLDLQVFGK----LINSLIKKDRLKEAKEL 334
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
E + L ++ +ID YC+ G + A ++ + G +PN T+ + G ++
Sbjct: 335 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 394
Query: 411 NNQSEKGVEAMKK 423
+ + K + + K
Sbjct: 395 DKKLHKAMALLTK 407
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 101/262 (38%), Gaps = 12/262 (4%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P Y L + A E + Q+ GL+ T+ YN+M+ Y + G+
Sbjct: 33 PKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFR 92
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
+ E G++ + +T + L+ + + MM G + Y G A
Sbjct: 93 LLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPL-MGCQRNEYSYTILIQGLCDA 151
Query: 272 GLSDKALAVLRKSEVLMMHNKFS---RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
KAL + ++M + S RA+ F+I+ G D ++ QN V +
Sbjct: 152 KCVRKALVLF----LMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPS 207
Query: 329 -RGYICVISSLLKFDGMESAEKIFEEWESRNLCH-DIRIPNHLIDAYCRRGLLHKAETLI 386
Y +I K M A KI E E +N CH D N LI C + +AE L+
Sbjct: 208 VMTYNAMIVGYSKLGRMNDALKIKELME-KNGCHPDDWTYNTLIYGLCDQK-TEEAEELL 265
Query: 387 YKAQLRGTEPNVRTWYLMATGY 408
A G P V T+ + GY
Sbjct: 266 NNAVKEGFTPTVVTFTNLINGY 287
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 36/250 (14%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P VY +L+ + E I ++M RG N+ M+ ++ G+ +K ++
Sbjct: 496 PVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFE 555
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
+++ G D ++SIL+ A I M+ +G LD Y G+ K+
Sbjct: 556 DIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMK-QQGFALDARAYNAVVDGFCKS 614
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
G DKA VL + +V KR + Y
Sbjct: 615 GKLDKAYEVLEEMKV-------------------------------KRVPPTVATYGS-- 641
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I L K D ++ A +FEE +S+ + ++ + + LID + + G + +A ++ +
Sbjct: 642 --IIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMK 699
Query: 392 RGTEPNVRTW 401
+G PNV TW
Sbjct: 700 KGLTPNVYTW 709
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 141/348 (40%), Gaps = 22/348 (6%)
Query: 61 GDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPA 120
G PN + L+ V R D E++ +++ + FS + M + P
Sbjct: 144 GVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQ----PE 199
Query: 121 DVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRD 180
L+L+ ++Q + Y VP ++ L+ A A E A ++ +++
Sbjct: 200 RA---LELLRQMQEV----GYEVGVP-------LFTTLVRALAREGRVEGALALVDEVKG 245
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
L + YN ++ + + GN HE++ +G+ D +++ ++ A
Sbjct: 246 SCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSE 305
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDF 299
+++ ME +R V + Y T GY AG + A +L + E + + S ++
Sbjct: 306 AEELFGQMETERAVPCAYA-YNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVS--FNS 362
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
++T D+ L +++ K++ + + Y +I L +E A I +E E L
Sbjct: 363 ILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGL 422
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
++ N ++D C+ A + A RG PN T+ + G
Sbjct: 423 FPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDG 470
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 66/352 (18%), Positives = 139/352 (39%), Gaps = 53/352 (15%)
Query: 117 LTPADVAIR--LDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAE 172
L P DV+ + ++ K + +A F + + +P Y ++ Y A E A
Sbjct: 283 LKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAY 342
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS--LMHEMEEKGIDCDKYTFSILLS 230
++ Q+++RG + + +NS++ G +K+D + E +K + + T++I++
Sbjct: 343 KLLDQLKERGCIPSVVSFNSILTCL---GKKRKVDEALTLFEAMKKDAEPNSSTYNIIID 399
Query: 231 A-CAAASDGEG----------------------IDKIV---------AMME--ADRGVVL 256
C A E +D++ M E + RG
Sbjct: 400 MLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNP 459
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV 316
+ Y + G K G D A + ++ + HN Y +I + G K+D ++
Sbjct: 460 NSVTYCSLIDGLGKKGNVDDAYRLF-ENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKI 518
Query: 317 WKRY-----KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
+K + +L + N CV K +E IFE+ + D+R + LI
Sbjct: 519 FKEMNRRGCQPDLTLLNTYMDCV----FKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIH 574
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ G + ++ + + +G + R + + G+ ++ + +K E +++
Sbjct: 575 GLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEE 626
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/282 (17%), Positives = 112/282 (39%), Gaps = 12/282 (4%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKL-PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
L + K + +++A + F + + + S Y +++ A E+A +I +M GL
Sbjct: 364 LTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLF 423
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI 244
+ N M++ + ++ + ++G + + T+ L+ + + ++
Sbjct: 424 PNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRL 483
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
M D G + VY + + G + + ++ M+ + + ++ Y
Sbjct: 484 FENM-LDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKE-----MNRRGCQPDLTLLNTY 537
Query: 305 AACGNKDDVLRVWKRYKQNLKVYN-----RGYICVISSLLKFDGMESAEKIFEEWESRNL 359
C K + + +++K Y R Y +I L K IF + +
Sbjct: 538 MDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGF 597
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
D R N ++D +C+ G L KA ++ + +++ P V T+
Sbjct: 598 ALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATY 639
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 115/258 (44%), Gaps = 13/258 (5%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y ++++ A ++A ++ ++ + +G+ I Y+S+++ + + G + ++ E
Sbjct: 637 ATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEE 696
Query: 213 MEEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
M +KG+ + YT++ L+ A A + E + +M E + Y+ +G +
Sbjct: 697 MMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMK--CSPNTYTYSILINGLCRV 754
Query: 272 GLSDKALAVLRKSEVL-MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG 330
+KA ++ + ++ N + Y +I A GN D +++R+K N +
Sbjct: 755 QKYNKAFVFWQEMQKQGLVPNVVT--YTTMIAGLAKVGNITDACSLFERFKANGGTPDAA 812
Query: 331 -YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
+ +I + + A +FEE + +++ L+DA L+KAE L A
Sbjct: 813 SFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDA------LNKAECLEQAA 866
Query: 390 QLRGTEPNVRTWYLMATG 407
+ E VR ++ G
Sbjct: 867 VVGFGENTVRHFFQWTEG 884
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 132/276 (47%), Gaps = 28/276 (10%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y A++NA++ + + ++A I Q+M+D G T +N+++ Y G ++ ++H M
Sbjct: 130 LYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLM 189
Query: 214 EEKG-IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
G + + T++IL+ A + + E ++ M A G+ D Y A Y + G
Sbjct: 190 SLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVAS-GIQPDVVTYNILARAYAQKG 248
Query: 273 LSDKALAVLRKSEVL--MMHNKFS---RAYDFVITQYAACGNKDDVLRVWKRYKQ----- 322
LR +++ M + K + R ++ Y GN + LR R K+
Sbjct: 249 ------ETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHP 302
Query: 323 NLKVYN---RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
NL ++N +G++ + + DG++ A + EE+ + D+ + +++A+ GL+
Sbjct: 303 NLVIFNSLIKGFLDITDT----DGVDEALTLMEEYGVK---PDVITFSTIMNAWSSAGLM 355
Query: 380 HKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
K + + G EP++ + ++A GY++ ++E
Sbjct: 356 DKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETE 391
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 109/269 (40%), Gaps = 36/269 (13%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L AYA +AE ++ +M+ + ++N Y + GN + ++ M
Sbjct: 236 TYNILARAYAQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRM 295
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+E G+ + F+ L+ +D +G+D+ + +ME + GV D ++T + + AGL
Sbjct: 296 KELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLME-EYGVKPDVITFSTIMNAWSSAGL 354
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
DK + N ++A G + D+ + +GY+
Sbjct: 355 MDKCQEIF---------NDMAKA-----------GIEPDI--------HAFSILAKGYV- 385
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+ E+AE + + ++ I +I +C G + A+ + K G
Sbjct: 386 ------RAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEKMCEIG 439
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
PN++T+ + GY + Q K E ++
Sbjct: 440 ISPNLKTFETLIWGYAEARQPGKAEELLQ 468
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 127/302 (42%), Gaps = 18/302 (5%)
Query: 117 LTPADVAIR--LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAE 172
+ P DV +D K +A S F C+ + P V Y AL++ + A
Sbjct: 582 IAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAM 641
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
++ + ++GLV YNS+++ + + G K L M +KGI + T++ L++
Sbjct: 642 ELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGL 701
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
A + E ++ + +G+ + YAT GY K+G KA + + + +
Sbjct: 702 CKAGEIERARELFDGIPG-KGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPD 760
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
S Y +I GN + L ++ L+ +G+ S DG + K+ E
Sbjct: 761 -SFVYSALIDGCRKEGNTEKALSLF------LESVQKGFASTSSLNALMDGFCKSGKVIE 813
Query: 353 EWESRNLCHDIRI-PNH-----LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
+ D + P+H LID +C+ G L +AE Q R PN T+ + +
Sbjct: 814 ANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLS 873
Query: 407 GY 408
GY
Sbjct: 874 GY 875
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 149/363 (41%), Gaps = 50/363 (13%)
Query: 98 RFSHALQISMWMTKKS--NFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVY 155
RF A++I M KK VL V I L K + +E+A Y + E+ P+VY
Sbjct: 496 RFQEAVRILKVMDKKGVQPDVLCYNSVIIGL---CKSRKMEEAKDYLVEMIERGLKPNVY 552
Query: 156 I--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
AL++ Y + + A+ ++M G+ + ++++ Y + G+ + S+ M
Sbjct: 553 TYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCM 612
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ + D T+S L+ +G ++++ ++G+V D Y + SG+ K G
Sbjct: 613 LGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF-LEKGLVPDVFTYNSIISGFCKQGG 671
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
KA F + +Y K N+ YN
Sbjct: 672 IGKA---------------------FQLHEYMC----------QKGISPNIITYN----A 696
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+I+ L K +E A ++F+ + L H+ +ID YC+ G L KA L + L+G
Sbjct: 697 LINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKG 756
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACL-GYYKKER 452
P+ + + G + +EK + + LE+ + S L A + G+ K +
Sbjct: 757 VPPDSFVYSALIDGCRKEGNTEKALS------LFLESVQKGFASTSSLNALMDGFCKSGK 810
Query: 453 DIE 455
IE
Sbjct: 811 VIE 813
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 180/428 (42%), Gaps = 48/428 (11%)
Query: 86 LRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCV 145
++I ++ F A+ + K++ FV+ L + K +E ++N +
Sbjct: 169 FELLIDGYKKKGLFDEAVSFFLG-AKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGM 227
Query: 146 PEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
E L VY L+NA+ A +A++ + ++ +M ++G + YN ++ + G
Sbjct: 228 LEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEV 287
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSA------CAAA--------SDG--EGIDKIVAM 247
+ L M++KG+ D +T+SIL+ C A S G G A+
Sbjct: 288 DEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTAL 347
Query: 248 MEA------------------DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
++ RGV L+ Y G K G +KA A+L +E++M+
Sbjct: 348 IDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALL--NEMIMV 405
Query: 290 HNKF-SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC--VISSLLKFDGMES 346
K ++ Y+ +I Y N V + K++ + Y C +I+ L + +E
Sbjct: 406 GIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKS-NLVPTAYTCGMIINGLCRHGSIED 464
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
A ++FE S + + I LI + + G +A ++ +G +P+V + +
Sbjct: 465 ASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVII 524
Query: 407 GYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTG 466
G ++ + E EA + ++E G KP+ A + Y K +++ AD + K + G
Sbjct: 525 GLCKSRKME---EAKDYLVEMIERG--LKPNVYTYGALIHGYCKSGEMQVADRYFKEMLG 579
Query: 467 KEIISADL 474
I D+
Sbjct: 580 CGIAPNDV 587
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 138/325 (42%), Gaps = 26/325 (8%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ + K +A++++++M +GL + Y ++++ + + G+ + + EM
Sbjct: 309 YSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEML 368
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+G+ + +T++ L+ D E D ++ M G+ D Y GY+K +
Sbjct: 369 ARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIM-VGIKPDTQTYNNMIEGYLKEQNT 427
Query: 275 DKA---LAVLRKSEVLMMHNKFSRAY--DFVITQYAACGNKDDVLRVWK-----RYKQNL 324
+ L+ ++KS N AY +I G+ +D RV++ K N
Sbjct: 428 SRVKDLLSEMKKS------NLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNA 481
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
+Y +I ++ + A +I + + + + D+ N +I C+ + +A+
Sbjct: 482 VIYTT----LIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKD 537
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAAC 444
+ + RG +PNV T+ + GY ++ + + K+ L G P+ A
Sbjct: 538 YLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEML-----GCGIAPNDVVCTAL 592
Query: 445 LGYYKKERDIEGADYFIKLLTGKEI 469
+ Y KE A + + G+ +
Sbjct: 593 IDGYCKEGSTTEATSIFRCMLGRSV 617
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 145/373 (38%), Gaps = 57/373 (15%)
Query: 63 PNDSM-VPLLDQWVEEGRPLDMEQL------RIIIKKFRLYKRFSHAL----QISMWMTK 111
PND + L+D + +EG + + R + R Y H L ++ M
Sbjct: 584 PNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMEL 643
Query: 112 KSNFV---LTPADVAIRLDLIA---KVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYA 163
S F+ L P DV +I+ K GI +A + +K P++ Y AL+N
Sbjct: 644 LSEFLEKGLVP-DVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLC 702
Query: 164 CAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKY 223
A E+A + + +GL + Y ++++ Y ++GN K L EM KG+ D +
Sbjct: 703 KAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSF 762
Query: 224 TFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
+S L+ C + E + +E+ + + G+ K+G V+
Sbjct: 763 VYSALIDGCRKEGNTE--KALSLFLESVQKGFASTSSLNALMDGFCKSG------KVIEA 814
Query: 284 SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDG 343
+++L +D++ +++K + Y +I K
Sbjct: 815 NQLL-----------------------EDMV------DKHVKPDHVTYTILIDYHCKTGF 845
Query: 344 MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYL 403
++ AE+ F + + RNL + L+ Y G + L + + EP+ TW +
Sbjct: 846 LKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSV 905
Query: 404 MATGYLQNNQSEK 416
M +L+ K
Sbjct: 906 MIDAHLKEGDHVK 918
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 3/257 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++AY ++A + +M +RG + Y ++++ G ++ +M
Sbjct: 382 YTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKML 441
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
E+G+ D ++IL+S ++A M D+ V+ D VYAT G+++ G
Sbjct: 442 ERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEM-LDQSVLPDAFVYATLVDGFIRNGNL 500
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYIC 333
D+A + + M N Y+ +I Y G D + R K+ +L Y
Sbjct: 501 DEARKLFELTIEKGM-NPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYST 559
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
VI +K ++ A+K+F E ++ LI+ +CR+G LH++ + + Q G
Sbjct: 560 VIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACG 619
Query: 394 TEPNVRTWYLMATGYLQ 410
PNV T+ ++ + +
Sbjct: 620 LVPNVVTYSILIGSFCK 636
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 144/340 (42%), Gaps = 20/340 (5%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKA-EIIMQQMRDRG 182
+D K +E A F + K LP+V Y A++N + C K KA + ++ +M RG
Sbjct: 246 IDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGF-CKKGDFKAIDRLLMEMNSRG 304
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
L YN++++ Y+ G+ K + M E G D T++ L+S + DG+ +
Sbjct: 305 LTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLIS--GSCRDGKVSE 362
Query: 243 KIVAMMEA-DRGVVLDWTVYATAASGYVKAGLSDKALA-VLRKSEVLMMHNKFSRAYDFV 300
+ +A +G++ + Y Y K G D+A ++ +E H Y +
Sbjct: 363 ADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTE--RGHKPDLVTYGAL 420
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNL 359
+ G D L + ++ + + G Y ++S L K + +A+ + E +++
Sbjct: 421 VHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSV 480
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
D + L+D + R G L +A L +G P + + M GY +
Sbjct: 481 LPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCK-------FG 533
Query: 420 AMKKALVLLEAGTR--WKPSKECLAACLGYYKKERDIEGA 457
MK A+ + + P + + + Y K+ D++GA
Sbjct: 534 MMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGA 573
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 128/297 (43%), Gaps = 10/297 (3%)
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
K G ++A+++ + E+ P + Y AL++ A + A I ++M +RG+
Sbjct: 390 CKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDA 449
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
YN +M+ + L+ EM ++ + D + ++ L+ + + K+ +
Sbjct: 450 GIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFEL 509
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVL-RKSEVLMMHNKFSRAYDFVITQYAA 306
++G+ Y GY K G+ A+A + R + + ++F+ Y VI Y
Sbjct: 510 T-IEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFT--YSTVIDGYVK 566
Query: 307 CGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
+ D ++++ K K Y +I+ + + + KIF E ++ L ++
Sbjct: 567 QHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVT 626
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ---SEKGVE 419
+ LI ++C+ L A + + + PN T+ + G+ +N SEKG E
Sbjct: 627 YSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNE 683
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 153/376 (40%), Gaps = 52/376 (13%)
Query: 68 VPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLD 127
V L + VEE P E + I+I+ + AL++ ++ K + L+
Sbjct: 115 VVLENMRVEEMSP-TREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLN 173
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYA--------CAKSA-EKAEIIMQQM 178
++ K+ IE A ++ E L++ ++ Y+ C + E+ +++
Sbjct: 174 MLVKLGRIEIARKLYD---EMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDR 230
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG 238
+G + I YN++++ Y + G+ + + L E++ KG T+ +++ D
Sbjct: 231 WGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDF 290
Query: 239 EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYD 298
+ ID+++ M + RG+ ++ VY T K G KA+
Sbjct: 291 KAIDRLLMEMNS-RGLTVNVQVYNTIIDARYKHGHIVKAVE------------------- 330
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
I CG K D++ YN +IS + + A+++ E+ +
Sbjct: 331 -TIEGMIECGCKPDIV-----------TYNT----LISGSCRDGKVSEADQLLEQALGKG 374
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
L + LI AYC++G +A + + RG +P++ T+ + G + + + +
Sbjct: 375 LMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVAL 434
Query: 419 EAMKKAL---VLLEAG 431
+K L V +AG
Sbjct: 435 TIREKMLERGVFPDAG 450
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 141/357 (39%), Gaps = 41/357 (11%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+ V+EG P D+ I+ F R + A + M ++ N + I +D +
Sbjct: 102 FFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVER-NVIPNKVTFTILIDGL 160
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
K + I +A F + EK P VY AL++ Y ++A+ + M +G
Sbjct: 161 CKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNV 220
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVA 246
YN ++N + ++G + L+ EM K + D +T+S L+ C E + +
Sbjct: 221 RSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKE 280
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
M G++ + Y+ G K G D+A +L+ +
Sbjct: 281 M--CSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQ--------------------- 317
Query: 307 CGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
+ + N+ +Y +I + F +E+A ++F + + +
Sbjct: 318 ----------ESKIEPNIFIYT----ILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTY 363
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+I + GL ++A L + + G PN T+ ++ G+L+N + V +++
Sbjct: 364 TVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEE 420
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 112/255 (43%), Gaps = 11/255 (4%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILLSAC 232
+ +M G I Y++++N + GN L+ +MEEKG + + +I+ S C
Sbjct: 32 LFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLC 91
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
E +D M++ G+ D Y++ G+ G ++A ++ ++ ++ N
Sbjct: 92 KDRLVTEAMDFFSEMVK--EGIPPDVFTYSSILHGFCNLGRVNEATSLFKQ---MVERNV 146
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYK----QNLKVYNRGYICVISSLLKFDGMESAE 348
F I C K + W ++ + L+ Y ++ M+ A+
Sbjct: 147 IPNKVTFTILIDGLC-KKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQ 205
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
K+F + + ++R N LI+ +C+ G + +A+ L+ + + P++ T+ + G+
Sbjct: 206 KLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGF 265
Query: 409 LQNNQSEKGVEAMKK 423
Q + ++ E +K+
Sbjct: 266 CQVGRPQEAQELLKE 280
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/363 (19%), Positives = 144/363 (39%), Gaps = 43/363 (11%)
Query: 68 VPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR-- 125
V L D+ V+ G D+ II + ALQ+ M +K P VA
Sbjct: 30 VKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKG---CKPNVVAYNTI 86
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K + + +A +F+ + ++ P V Y ++L+ + +A + +QM +R +
Sbjct: 87 IDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNV 146
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ + + +++ + + + M EKG++ D YT++ L+ + S + K
Sbjct: 147 IPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQK 206
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ 303
+ +M+ +G + Y +G+ K+G D+A +L + M H +
Sbjct: 207 LFNIMDR-KGCAPNVRSYNILINGHCKSGRIDEAKGLLAE----MSHKSLT--------- 252
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
D+ Y ++ + + A+++ +E S L ++
Sbjct: 253 -------PDIFT---------------YSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNL 290
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ ++D C+ G L +A L+ Q EPN+ + ++ G + E E
Sbjct: 291 ITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSN 350
Query: 424 ALV 426
V
Sbjct: 351 LFV 353
>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g55840-like [Cucumis sativus]
Length = 1079
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 117/273 (42%), Gaps = 5/273 (1%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S + L++ +KA I+ M G V + YN++++ + G +K L+H
Sbjct: 176 SSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHH 235
Query: 213 MEEKGIDCDKYTFSILL-SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
ME KGI D T+++ + S C + +G +V ++ + + Y T +G+VK
Sbjct: 236 MECKGIQADVCTYNMFIDSLCRNSRSAQGY--LVLKKMRNKMITPNEVSYNTLINGFVKE 293
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
G A V + L + Y+ +I Y GN ++ LR+ + N N
Sbjct: 294 GKIGVATRVFNEMIELNLSPNLI-TYNILINGYCINGNFEEALRLLDVMEANDVRPNEVT 352
Query: 332 I-CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
I +++ L K + A I E + + +ID CR GLL +A L+ +
Sbjct: 353 IGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMC 412
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G P++ T+ ++ G+ + K E M K
Sbjct: 413 KDGVYPDIITFSVLINGFCKVGNLNKAKEVMSK 445
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 8/243 (3%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+AE + + GLV ++ ++ ++N Y G+ S+ +M G +T+ LL
Sbjct: 508 EAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLL 567
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
+ K++ + + +D Y T K+G L +R E ++
Sbjct: 568 KVLCKGQNFWEARKLLKKLHCIP-LAVDTISYNTLIVEISKSG---NLLEAVRLFEEMIQ 623
Query: 290 HNKFSRAYDF--VITQYAACGNKDDVLRVWKRYKQN--LKVYNRGYICVISSLLKFDGME 345
+N +Y + +++ G R Q L + + Y C I L K +
Sbjct: 624 NNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSK 683
Query: 346 SAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
+A +F+E E + L D+ N + D Y R G + A +LI K + + PN+ T+ ++
Sbjct: 684 AALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILL 743
Query: 406 TGY 408
GY
Sbjct: 744 HGY 746
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 98/258 (37%), Gaps = 9/258 (3%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N + A + +M + L I YN ++N Y GN+++ L+ ME
Sbjct: 283 YNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVME 342
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ ++ T LL+ ++ + I+ +R L+ + G + GL
Sbjct: 343 ANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINR-TSLNCISHTVMIDGLCRNGLL 401
Query: 275 DKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVW-KRYKQNLKVYNRG 330
D+A +L + M + + +I + GN + V K Y++ N
Sbjct: 402 DEAFQLL----IEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVI 457
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
+ +I + K + K + D N L+ + C G L +AE ++
Sbjct: 458 FSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHIS 517
Query: 391 LRGTEPNVRTWYLMATGY 408
G PN T+ + GY
Sbjct: 518 RIGLVPNSVTFDCIINGY 535
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P Y +LL ++ +A +++++ L TI YN+++ ++GN + L
Sbjct: 560 PFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFE 619
Query: 212 EMEEKGIDCDKYTFSILLSA--------CAAASDGEGIDKIVAMMEADRGVVLDWTVYAT 263
EM + I D YT++ +LS CA G + K + + L+ VY
Sbjct: 620 EMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEI--------LTLNSIVYTC 671
Query: 264 AASGYVKAGLSDKALAVLRKSE 285
G KAG S AL + ++ E
Sbjct: 672 FIDGLFKAGQSKAALYLFKEME 693
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
A++ A E+A I+Q+M + T + ++M+V+ + N+K+ +L ME
Sbjct: 916 AMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHY 975
Query: 217 GIDCDKYTFSILLSACAAASD 237
+ D +++L+SAC A D
Sbjct: 976 RVKLDIVAYNVLISACCANGD 996
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 120/264 (45%), Gaps = 17/264 (6%)
Query: 149 LKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
L+ +Y L+N Y E A I QQM+ R + I YN+++N + +
Sbjct: 360 LQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHD 419
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
L+ EME+ G++ TF+ L+ A A E I++ M+ ++G+ + Y + + +
Sbjct: 420 LVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQ-EKGLKPNVVSYGSIVNAF 478
Query: 269 VKAGLSDKALAVLRK---SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ--- 322
K G +A+A+L +VL ++ Y+ +I Y CG+ D + ++ K
Sbjct: 479 CKNGKILEAVAILDDMFIKDVL----PGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGV 534
Query: 323 --NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
++ YN +I L K + AE++ + + L D+ N LI A C R
Sbjct: 535 PPSIVTYN----LLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTD 590
Query: 381 KAETLIYKAQLRGTEPNVRTWYLM 404
+A L + G +P+ RT+ ++
Sbjct: 591 RALELEKEMWKCGIKPSPRTYRML 614
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 127/284 (44%), Gaps = 15/284 (5%)
Query: 138 AASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMN 195
A F+ +PEK +P+ Y +++ + E + QM GL I YN +++
Sbjct: 207 AVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLS 266
Query: 196 VYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRG 253
+ G + +++ EM + + D +T+SIL + D + ++++ E +G
Sbjct: 267 GLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ---TMLSLFEESVKKG 323
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLR---KSEVLMMHNKFSRAYDFVITQYAACGNK 310
V + + +G K G KA VL+ S +L + + Y+ +I Y G+
Sbjct: 324 VKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLL----QTTVIYNTLINGYCQIGDL 379
Query: 311 DDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
+ ++++ K L + + Y +I+ L K + + A + E E + + N L
Sbjct: 380 EGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTL 439
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
IDAY R G L K ++ Q +G +PNV ++ + + +N +
Sbjct: 440 IDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGK 483
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 75/371 (20%), Positives = 150/371 (40%), Gaps = 42/371 (11%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
L+ S GD + +M+ L ++ V++G + I++ + S A ++ +
Sbjct: 299 LFDGHSRTGD-SQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVN- 356
Query: 113 SNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEK 170
S + T ++ ++ +E A S F + +L P Y AL+N + +
Sbjct: 357 SGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITE 416
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS 230
A ++ +M G+ +N++++ Y + G +K ++ +M+EKG+ + ++ +++
Sbjct: 417 AHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVN 476
Query: 231 A-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK------ 283
A C E + + M D V+ VY Y++ G +D+A + K
Sbjct: 477 AFCKNGKILEAVAILDDMFIKD--VLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGV 534
Query: 284 -----------------------SEVLMMHNKFSRAYDFVI--TQYAAC---GNKDDVLR 315
E+L + A D + T +AC N D L
Sbjct: 535 PPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALE 594
Query: 316 VWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
+ K +K +K R Y + SSL + E ++++ +++ I N ++DAY
Sbjct: 595 LEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYA 654
Query: 375 RRGLLHKAETL 385
+ G K E L
Sbjct: 655 KCGEESKVEAL 665
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P Y L ++ A + E + QQM D+ +V + YN M++ Y + G K+++L
Sbjct: 608 PRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRK 667
Query: 212 EMEEKGIDCDKYT 224
EM +KGI YT
Sbjct: 668 EMSDKGIAVGDYT 680
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 119/293 (40%), Gaps = 18/293 (6%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
SVY AL+N + A +M++M ++G+ I Y++++NV +G + S + +
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTV--YATAASGYVK 270
M ++G + YT S L+ C G D + + RG L V Y T G+
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFL--RGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCS 364
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-----KQNLK 325
G KA++V E + R Y +I +A G+ D + +W + N+
Sbjct: 365 HGNIVKAVSVFSHMEEIGCSPNI-RTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVV 423
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
VY ++ +L + + AE + E N + N I C G L AE +
Sbjct: 424 VYTN----MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 479
Query: 386 IYK-AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPS 437
+ Q PN+ T+ + G + N+ E EA + G W S
Sbjct: 480 FRQMEQQHRCPPNIVTYNELLDGLAKANRIE---EAYGLTREIFMRGVEWSSS 529
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 57/306 (18%), Positives = 123/306 (40%), Gaps = 38/306 (12%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++I++++ Y AE+A + ++++ G YN +++ + + + +M
Sbjct: 113 LFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDM 172
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ G + + +T+++LL A + +G K++ M +++G D Y T S + GL
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEM-SNKGCCPDAVSYTTVISSMCEVGL 231
Query: 274 SDKALAVLRKSEVLM-----MHNKFSRAYDF------------------VI---TQYAAC 307
+ + + E ++ + N + +D+ VI T
Sbjct: 232 VKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVL 291
Query: 308 GNKDDVLRVWKRYKQNLKVYNRGYICVISSLLK--------FDGMESAEKIFEEWESRNL 359
N + + Q LK I +SSL+K FD ++ ++ + L
Sbjct: 292 CNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF---GL 348
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
++ N L+ +C G + KA ++ + G PN+RT+ + G+ + + V
Sbjct: 349 QPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVY 408
Query: 420 AMKKAL 425
K L
Sbjct: 409 IWNKML 414
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 129/291 (44%), Gaps = 21/291 (7%)
Query: 122 VAIRLDLIAKVQGIEQAASYFN------CVPEKLKLPSVYIALLNAYACAKSAEKAEIIM 175
V I +D + K Q +++A + F C P+++ + +L++ + A I
Sbjct: 415 VNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEI----TFCSLIDGLGKVGRVDDAYKIY 470
Query: 176 QQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAA 235
++M D +I Y S++ ++ G + + +M + D + + A
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKA 530
Query: 236 SDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKALAVL--RKSEVLMMHN 291
+ E K AM E R V D Y+ G +KAG +++ + K + ++
Sbjct: 531 GEPE---KGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLD- 586
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKI 350
+RAY+ VI + CG + ++ + K + + Y VI L K D ++ A +
Sbjct: 587 --TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 644
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
FEE +S+ + ++ I + LID + + G + +A ++ + +G PNV TW
Sbjct: 645 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTW 695
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 114/256 (44%), Gaps = 10/256 (3%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y L+ A++ ++ + QQM++ G + +++ + + G SL+ E
Sbjct: 169 SAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDE 228
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M+ +D D +++ + + + K +EA+ G+ D Y + KA
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN-GLKPDEVTYTSMIGVLCKAN 287
Query: 273 LSDKALAVLRKSEVLMMHNK---FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
D+A+ + E N+ + AY+ +I Y + G D+ + +R + + +
Sbjct: 288 RLDEAVEMFEHLE----KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV 343
Query: 330 -GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y C+++ L K ++ A ++FEE + ++ ++ N LID CR G L A L
Sbjct: 344 IAYNCILTCLRKMGKVDEALRVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDCAFELRDS 402
Query: 389 AQLRGTEPNVRTWYLM 404
Q G PNVRT +M
Sbjct: 403 MQKAGLFPNVRTVNIM 418
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 115/262 (43%), Gaps = 12/262 (4%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V++ L+ +A + A ++ +M+ L + YN ++ + + G
Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKF 260
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
HE+E G+ D+ T++ ++ A+ + ++ +E +R V + Y T GY
Sbjct: 261 FHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA-YNTMIMGYG 319
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ----NLK 325
AG D+A ++L + AY+ ++T G D+ LRV++ K+ NL
Sbjct: 320 SAGKFDEAYSLLERQRAKGSIPSVI-AYNCILTCLRKMGKVDEALRVFEEMKKDAAPNLS 378
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
YN +I L + ++ A ++ + + L ++R N ++D C+ L +A +
Sbjct: 379 TYN----ILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAI 434
Query: 386 IYKAQLRGTEPNVRTWYLMATG 407
+ + P+ T+ + G
Sbjct: 435 FEQMDYKVCTPDEITFCSLIDG 456
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 70/356 (19%), Positives = 139/356 (39%), Gaps = 26/356 (7%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D L D + G ++ + I++ + ++ A I M K V TP ++
Sbjct: 394 DCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYK---VCTPDEITF 450
Query: 125 --RLDLIAKVQGIEQAASYF------NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQ 176
+D + KV ++ A + +C + VY +L+ + E I +
Sbjct: 451 CSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSI----VYTSLIKNFFNHGRKEDGHKIYK 506
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
M ++ N+ M+ ++ G +K ++ E++ + D ++SIL+ A
Sbjct: 507 DMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAG 566
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA 296
++ M+ ++G VLD Y G+ K G +KA +L + +
Sbjct: 567 FANETYELFYSMK-EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV-T 624
Query: 297 YDFVITQYAACGNKDDVLRVW-----KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
Y VI A D+ ++ KR + N+ +Y+ +I K ++ A I
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS----LIDGFGKVGRIDEAYLIL 680
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
EE + L ++ N L+DA + +++A + PN T+ ++ G
Sbjct: 681 EELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILING 736
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 141/365 (38%), Gaps = 55/365 (15%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I +D + K + A + + + +K P+V Y L++ + E+A ++ M +
Sbjct: 377 IMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAK 436
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILLSACAAASDGEG 240
GL T+ YN ++ + G + + EM KG D YTF S++ C E
Sbjct: 437 GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEA 496
Query: 241 I----------------------------------DKIVAMMEADRGVVLDWTVYATAAS 266
+ DK+V M RG LD Y
Sbjct: 497 LGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRF-RGCPLDNITYNGLIK 555
Query: 267 GYVKAGLSDKALAVLRK---SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ- 322
K G ++K L ++ + E+ N + + +I + G +D L+ + Q
Sbjct: 556 ALCKTGATEKCLGLIEQMFGEEIFPSIN----SCNILINSFCRTGKVNDALQFLRDMIQR 611
Query: 323 ----NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
++ YN +I+ L K + A +F +++ + D N LI YC GL
Sbjct: 612 GLTPDIVTYNS----LINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL 667
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ-SEKGVEAMKKALVLLEAGTRWKPS 437
+ A L++K G PN TW ++ +++NN SE+ M L A R S
Sbjct: 668 FNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQFTILMGNWGFWLAAIIRHVSS 727
Query: 438 KECLA 442
C+A
Sbjct: 728 IGCIA 732
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 119/285 (41%), Gaps = 20/285 (7%)
Query: 150 KLPS----VYIALLNAYACAKSAEKA-EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
K+P+ +Y L+N Y + E+A +++ + M G +N M++ + G
Sbjct: 330 KIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLV 389
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
+ EM +KG + + T++IL+ E K+V M A +G+ L+ Y
Sbjct: 390 SALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSA-KGLSLNTVGYNCL 448
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA--YDFVITQYAACGNK--DDVLRVWKRY 320
K G AL + + M +K + Y F Y C N ++ L +++
Sbjct: 449 IGALCKDGKIQDALQMYGE-----MSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDM 503
Query: 321 KQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
+ N Y +I + L+ + ++ A+K+ E R D N LI A C+ G
Sbjct: 504 LLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGAT 563
Query: 380 HKAETLIYKAQLRGTE--PNVRTWYLMATGYLQNNQSEKGVEAMK 422
K LI Q+ G E P++ + ++ + + + ++ ++
Sbjct: 564 EKCLGLI--EQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLR 606
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 122/319 (38%), Gaps = 55/319 (17%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+VY ++ A+ + A +++ M G V +I Y +++ + + L
Sbjct: 198 PTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKL 257
Query: 210 MHEMEEKGIDCDKYTFS-ILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ EM G + D TF+ ++ C A E A DR ++ D+T A GY
Sbjct: 258 LEEMFLMGCEPDVQTFNDVIHGLCKAGRIHE------AAKLHDRMLLRDFTADA-LIQGY 310
Query: 269 VKAGLS-----DKALAVLRK----SEVL--------MMHNKFSRAYDFVITQYAACGNKD 311
+ GL D+A A+L K + VL ++ +F A D + G +
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEP 370
Query: 312 DVLR------------------------VWKRYKQNLKVYNRGYICVISSLLKFDGMESA 347
D V K ++ N+ Y +I K E A
Sbjct: 371 DAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYT----ILIDGFCKQGHFEEA 426
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
K+ ++ L + N LI A C+ G + A + + +G +P++ T+ + G
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486
Query: 408 YLQNNQSEKGVEAMKKALV 426
+N++ E+ + + L+
Sbjct: 487 LCKNDKMEEALGLYRDMLL 505
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 61/319 (19%), Positives = 129/319 (40%), Gaps = 34/319 (10%)
Query: 119 PADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQM 178
P DV +DL K G+++ Y + VY L++ + + +++QM
Sbjct: 71 PLDVPTSMDLFEKA-GLQRG--YIHSF-------HVYYLLIDKLGNVGEFKMIDKLLKQM 120
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF---SILLSACAAA 235
+D G V K + +M Y + G + L+ +M G+ C + TF +++L A
Sbjct: 121 KDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMW--GVYCFEPTFKSYNVVLEILVAG 178
Query: 236 SDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR 295
+ + + M + RG+ + + D A ++LR + H
Sbjct: 179 NCPKVAPNVFYDMLS-RGISPTVYTFGVVMKAFCMVNEVDSACSLLRD---MTKHGCVPN 234
Query: 296 A--YDFVITQYAACGNKDDVLRVWKRY-----KQNLKVYNRGYICVISSLLKFDGMESAE 348
+ Y +I + ++ +++ + + +++ +N VI L K + A
Sbjct: 235 SIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFND----VIHGLCKAGRIHEAA 290
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
K+ + R+ D I +L+ CR G + +A ++ K PN + + GY
Sbjct: 291 KLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----NPNTVLYNTLINGY 346
Query: 409 LQNNQSEKGVEAMKKALVL 427
+ + + E+ + + K +V+
Sbjct: 347 VVSGRFEEAKDLLYKNMVI 365
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 154/376 (40%), Gaps = 54/376 (14%)
Query: 111 KKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSA 168
KK F +T + + K+ +E+ + + E P++Y L+N A
Sbjct: 161 KKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFV 220
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
+ AE + + M + + YN+M+ Y + G +K + +ME +G + DK T+ +
Sbjct: 221 DSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTM 280
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM 288
+ AC A SD + M+ ++G+ + ++ G K G ++ V
Sbjct: 281 IQACYADSDFGSCVALYQEMD-EKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFEN----- 334
Query: 289 MHNKFSRA----YDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLK--- 340
M K S+ Y +I YA G+ +D +R+ R + K Y V++ L K
Sbjct: 335 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 394
Query: 341 ------------FDGM--------------------ESAEKIFEEWESRNLCHDIRIPNH 368
FDG+ + AE++FEE + D N
Sbjct: 395 VEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 454
Query: 369 LIDAYCRRGLLHKAETLIYK-AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVL 427
LIDA+ + + +A L + + G + V T+ ++ +G + +++E EA+K ++
Sbjct: 455 LIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNE---EALKLWDMM 511
Query: 428 LEAGTRWKPSKECLAA 443
++ G P+ C A
Sbjct: 512 IDKGI--TPTAACFRA 525
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 158/365 (43%), Gaps = 53/365 (14%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+E+A + F + ++ P+V Y +++ A+ ++A+ + QQM DRG+ YN
Sbjct: 177 VEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNC 236
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS-ACAAASDGEGIDKIVAMMEAD 251
+++ Y TG +K++ ++ EM G++ D T+++LL C E +M
Sbjct: 237 LIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFR-- 294
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDFVITQYAACG 308
+G+ D +YA GY G AL+ + LM+ N S R ++ + YA
Sbjct: 295 KGIKPDVAIYAILLHGYATKG----ALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKA 350
Query: 309 NKDDVLRVWKRYKQ---NLKVYNRG----YIC----VISSLLKFDGM------------- 344
++ + ++ + +Q + V + G +C V ++L+F+ M
Sbjct: 351 MIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFS 410
Query: 345 ------------ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
E AE++F E + +C D N L+ C G + +A+ LI
Sbjct: 411 SLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRV 470
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKER 452
G PNV ++ + G+ + + EA K V++ G KP++ L Y K R
Sbjct: 471 GVRPNVISYNTLVAGHCLTGRID---EAAKLLDVMVSNG--LKPNEFTYTILLRGYCKAR 525
Query: 453 DIEGA 457
++ A
Sbjct: 526 RVDDA 530
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 110/296 (37%), Gaps = 44/296 (14%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
E +I++ +M + G + YN+++N +++ G +K +L EM ++GI + T++ +
Sbjct: 143 EATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTV 202
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV-- 286
+ A + + M DRGV D Y GY+ G + + +L +
Sbjct: 203 IDGLCKAQVVDRAKGVFQQM-IDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHG 261
Query: 287 -------------------------LMMHNKFSRA-------YDFVITQYAACGNKDDV- 313
L + F + Y ++ YA G ++
Sbjct: 262 LEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMH 321
Query: 314 ----LRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
L V N +++N + + K +E A IF + + L D+ L
Sbjct: 322 SFLDLMVGNGVSPNRRIFN----IMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGAL 377
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
IDA C+ G + A + G PN+ + + G + EK E + L
Sbjct: 378 IDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVL 433
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y LL Y A+ + A + ++M +G+ YN++++ +QTG + + + L M
Sbjct: 514 YTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMI 573
Query: 215 EKGIDCDKYTFSILLSA 231
CD YT++I+L+
Sbjct: 574 NSRTKCDIYTYNIILNG 590
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 127/261 (48%), Gaps = 14/261 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y +++NA+ ++ +KA I +M D+GLV + +NS++ ++ ++K +E+
Sbjct: 95 LYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNEL 154
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+E+ + D Y+F I++ C + + +++ +++ D G+ + +Y T G K G
Sbjct: 155 KER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQ-DMGLSPNVVIYTTLIDGCCKNGD 212
Query: 274 SDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-----QNLKVY 327
++A K E+ ++ N+++ + +I G K D ++++ K NL Y
Sbjct: 213 IERARLFFDKMGEMGLVANQYT--FTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTY 270
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
N C+++ + A +F+E R + ++ N LI CR + +AE L+
Sbjct: 271 N----CLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVD 326
Query: 388 KAQLRGTEPNVRTWYLMATGY 408
+ + PN+ T+ + G+
Sbjct: 327 QMKKAAVSPNLITYNTLIGGF 347
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 107/255 (41%), Gaps = 11/255 (4%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ ++M+ GL YN +MN Y G + L EM E+G++ + T++ L+
Sbjct: 254 LFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMC 313
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF 293
+K+V M+ V + Y T G+ G DKA ++L + + N
Sbjct: 314 REERVWEAEKLVDQMKK-AAVSPNLITYNTLIGGFCDVGNLDKASSLLDQ----LKSNGL 368
Query: 294 SRA---YDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC--VISSLLKFDGMESAE 348
S + Y+ +I Y+ GN V + R + + C +I + ++ ME A
Sbjct: 369 SPSLVTYNILIEGYSKAGNWKGVADL-AREMEGRGISPSKVTCTVLIDAYVRLQEMEKAF 427
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+I+ E L D+ + LI C +G + ++ L EP+ + M GY
Sbjct: 428 QIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGY 487
Query: 409 LQNNQSEKGVEAMKK 423
+ + S + + +++
Sbjct: 488 CKEDNSYRALRLLRE 502
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 5/201 (2%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+ + + +KA ++ Q++ GL + YN ++ Y + GN+K + L EME
Sbjct: 340 YNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREME 399
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+GI K T ++L+ A + E +I + ME G+V D VY G G
Sbjct: 400 GRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEK-FGLVPDVYVYGVLIHGLCMKGNM 458
Query: 275 DKALAVLRKSEVLMMHNKFSRA-YDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYI 332
++ + R + MH + S Y+ +I Y N LR+ + + V N Y
Sbjct: 459 KESSKLFR--SMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYS 516
Query: 333 CVISSLLKFDGMESAEKIFEE 353
+I L K E AE + ++
Sbjct: 517 SIIGVLCKDGKWEEAEVLLDK 537
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 98/222 (44%), Gaps = 7/222 (3%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+AE ++ QM+ + I YN+++ + GN K SL+ +++ G+ T++IL+
Sbjct: 320 EAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILI 379
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
+ A + +G+ + ME RG+ YV+ +KA + E +
Sbjct: 380 EGYSKAGNWKGVADLAREMEG-RGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGL 438
Query: 290 HNKFSRAYDFVITQYAAC--GNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMES 346
Y + + + C GN + ++++ + +++ + Y +I K D
Sbjct: 439 ---VPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYR 495
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
A ++ E E++ L ++ + +I C+ G +AE L+ K
Sbjct: 496 ALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDK 537
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 121/281 (43%), Gaps = 38/281 (13%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
++KV +E++ YF + E+ LP+ Y L++ Y E AE ++Q+M D GL
Sbjct: 512 LSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPN 571
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ Y ++ Y+++ + +K+ S M ++G+ D + IL+ +++ + E ++++
Sbjct: 572 DVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLS 631
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
+E + G V D VY++ SG K +KA +L ++ S+
Sbjct: 632 GIEKN-GSVPDVHVYSSLISGLCKTADREKAFGIL---------DEMSK----------- 670
Query: 307 CGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
K N+ YN +I L K + A +F ++ L +
Sbjct: 671 -----------KGVDPNIVCYN----ALIDGLCKSGDISYARNVFNSILAKGLVPNCVTY 715
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
LID C+ G + A L + G P+ + ++ TG
Sbjct: 716 TSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 756
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 119/271 (43%), Gaps = 13/271 (4%)
Query: 159 LNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGI 218
L AY + + A+ ++ +MR+RG T+ YN ++ ++G ++ +ME+ G+
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288
Query: 219 DCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
D +T+ L++ C + E + M A+ + + VYA G+++ G +D+A
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAE--LKPNVVVYANLIDGFMREGNADEA 346
Query: 278 LAVLRKSEVL-MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG----YI 332
++++ + NK + YD ++ G D R KQ ++ +R Y
Sbjct: 347 FKMIKEMVAAGVQPNKIT--YDNLVRGLCKMGQMD---RASLLLKQMVRDSHRPDTITYN 401
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I + + A ++ E E+ + ++ + +I C+ G KA L+ + +
Sbjct: 402 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 461
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G +PN + + +GY + E K
Sbjct: 462 GLKPNAFVYAPLISGYCREGNVSLACEIFDK 492
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 103/260 (39%), Gaps = 40/260 (15%)
Query: 151 LPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
LP +Y +L+ + E++ QM++RGL+ Y+ +++ Y + G+ + +
Sbjct: 499 LPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQ 558
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
L+ M + G+ + + LL + + D E + M D+GV+LD
Sbjct: 559 LVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM-LDQGVMLD----------- 606
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
+R Y +I ++ GN + RV ++N V +
Sbjct: 607 -------------------------NRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPD 641
Query: 329 -RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y +IS L K E A I +E + + +I N LID C+ G + A +
Sbjct: 642 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 701
Query: 388 KAQLRGTEPNVRTWYLMATG 407
+G PN T+ + G
Sbjct: 702 SILAKGLVPNCVTYTSLIDG 721
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 128/340 (37%), Gaps = 47/340 (13%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+ + + E+A + M D GLV Y +++N ++ + +L+ EM
Sbjct: 259 TYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEM 318
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ + ++ L+ + + K++ M A GV + Y G K G
Sbjct: 319 SCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVA-AGVQPNKITYDNLVRGLCKMGQ 377
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ---NLKVYNRG 330
D+A ++L K V H + Y+ +I + +K D R+ + + VY
Sbjct: 378 MDRA-SLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYT-- 434
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA-------- 382
Y +I L + E A + EE ++ L + + LI YCR G + A
Sbjct: 435 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 494
Query: 383 -------------------------ETLIYKAQL--RGTEPNVRTWYLMATGYLQNNQSE 415
E+ Y AQ+ RG PN T+ + GYL+N E
Sbjct: 495 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 554
Query: 416 KGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIE 455
+ +++ L T KP+ L Y K DIE
Sbjct: 555 SAEQLVQRML-----DTGLKPNDVIYIDLLESYFKSDDIE 589
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 127/296 (42%), Gaps = 9/296 (3%)
Query: 135 IEQAASYFNCVPEKLKLPSVYI-ALLNAYACAKSAEKAEI-IMQQMRDRGLVKKTIDYNS 192
+ A +F+ + P+VY +L C + K + I++ MR G + YN+
Sbjct: 171 LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNT 230
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
++ +++ G + L+ M E G+ + TF+ +++ A E K+ M
Sbjct: 231 LVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM-VRE 289
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC--GNK 310
G+ D Y T GY KAG S +AL+V + + F + C GN
Sbjct: 290 GLAPDGVSYNTLVGGYCKAGCSHEALSVFAE---MTQKGIMPDVVTFTSLIHVMCKAGNL 346
Query: 311 DDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
+ + + ++ ++ L++ + +I K ++ A + + + N L
Sbjct: 347 ERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNAL 406
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
I+ YC G + +A L+++ + +G +P+V T+ + + Y +N + E ++ L
Sbjct: 407 INGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML 462
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 116/255 (45%), Gaps = 9/255 (3%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y L+ A+ A + AE ++ MR+ GL + +NSM+N + G + +
Sbjct: 223 PNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKV 282
Query: 210 MHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
EM +G+ D +++ L+ C A E + M + +G++ D + +
Sbjct: 283 FDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQ--KGIMPDVVTFTSLIHVM 340
Query: 269 VKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKV 326
KAG ++A+ ++R+ E + N+ + + +I + G DD L + KQ +K
Sbjct: 341 CKAGNLERAVTLVRQMRERGLQMNEVT--FTALIDGFCKKGFLDDALLAVRGMKQCRIKP 398
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
Y +I+ M+ A ++ E E++ L D+ + +I AYC+ H A L
Sbjct: 399 SVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELN 458
Query: 387 YKAQLRGTEPNVRTW 401
+ +G P+ T+
Sbjct: 459 QQMLEKGVLPDAITY 473
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 116/282 (41%), Gaps = 6/282 (2%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ +++N A E A + +M GL + YN+++ Y + G + S+ EM
Sbjct: 263 FNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMT 322
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+KGI D TF+ L+ A + E +V M +RG+ ++ + G+ K G
Sbjct: 323 QKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMR-ERGLQMNEVTFTALIDGFCKKGFL 381
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYIC 333
D AL +R + + Y+ +I Y G D+ + + + LK Y
Sbjct: 382 DDALLAVRGMKQCRIKPSVV-CYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYST 440
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+IS+ K SA ++ ++ + + D + LI C L A L G
Sbjct: 441 IISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLG 500
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGV---EAMKKALVLLEAGT 432
+P+ T+ + G+ + E + + M KA VL + T
Sbjct: 501 LQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVT 542
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 118/276 (42%), Gaps = 20/276 (7%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+ Y A + +A + +M +G++ + + S+++V + GN ++ +L+ +M
Sbjct: 298 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMR 357
Query: 215 EKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E+G+ ++ TF+ L+ C + + + M + + Y +GY G
Sbjct: 358 ERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCR--IKPSVVCYNALINGYCMVGR 415
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG--- 330
D+A +L + E + Y +I+ Y C N D ++ N ++ +G
Sbjct: 416 MDEARELLHEMEAKGLKPDVV-TYSTIISAY--CKNCD----THSAFELNQQMLEKGVLP 468
Query: 331 ----YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
Y +I L + A +F+ L D LID +C+ G + A +L
Sbjct: 469 DAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLH 528
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
K G P+V T+ ++ G ++S + +EA +
Sbjct: 529 DKMVKAGVLPDVVTYSVLINGL---SKSARAMEAQQ 561
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 34/285 (11%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PSV Y AL+N Y ++A ++ +M +GL + Y+++++ Y + + L
Sbjct: 398 PSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFEL 457
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAA---SDGEGIDKIVAMMEADRGVVLDWTVYATAAS 266
+M EKG+ D T+S L+ SD + K + + G+ D Y +
Sbjct: 458 NQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKL----GLQPDEFTYTSLID 513
Query: 267 GYVKAGLSDKALAV---LRKSEVL-------MMHNKFSR------AYDFVITQYAACGNK 310
G+ K G + AL++ + K+ VL ++ N S+ A + Y
Sbjct: 514 GHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLY-----H 568
Query: 311 DDVLRVWKRYKQNLKVYNRGYICVISSLLK---FDG-MESAEKIFEEWESRNLCHDIRIP 366
+D + +Y + + + + +LLK G M A+K+++ RN D +
Sbjct: 569 EDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVY 628
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
+ LI +CR G + KA + + G PN + + G +N
Sbjct: 629 SVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFEN 673
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 111/259 (42%), Gaps = 37/259 (14%)
Query: 151 LPSVYIA--LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
+P VY+ ++NA+ + A ++++M GL + YN ++N Y G+++ ++
Sbjct: 223 VPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVER 282
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
++ M E+G+ + T ++L+ + +K++ +E D +V+D VY GY
Sbjct: 283 VLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGY 342
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
+ G + A+ + +D++LRV K N+ + N
Sbjct: 343 CQMGRMEDAVRI-----------------------------RDEMLRVG--LKVNMVICN 371
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+I K + AE++F NL D N L+D YCR G + KA L +
Sbjct: 372 T----LIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEE 427
Query: 389 AQLRGTEPNVRTWYLMATG 407
G P V T+ + G
Sbjct: 428 MLGDGITPTVVTYNTVIKG 446
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 106/262 (40%), Gaps = 3/262 (1%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
L+ Y +AE + M D L YN++++ Y + G K L EM
Sbjct: 372 TLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGD 431
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
GI T++ ++ + + +M +RGV + T + K G SD+
Sbjct: 432 GITPTVVTYNTVIKGLVDVGSYDDALHLWHLM-VERGVTPNEISCCTMLDCFFKMGDSDR 490
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVI 335
A+ +L K + K + A++ +I+ G + V+ R K+ L Y +
Sbjct: 491 AM-MLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLS 549
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
K ++ A +I E + + I + N LID + L+ L+ + Q RG
Sbjct: 550 DGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLS 609
Query: 396 PNVRTWYLMATGYLQNNQSEKG 417
PNV T+ + +G+ + +K
Sbjct: 610 PNVVTYGTLISGWCDEQKLDKA 631
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 123/327 (37%), Gaps = 40/327 (12%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K+ + +A + F+ + E P Y L + Y + ++A I M + +
Sbjct: 517 LCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSAS 576
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIV 245
YNS+++ ++ + L+ EM+ +G+ + T+ L+S C +
Sbjct: 577 IEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYF 636
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS---EVLMMHNKFSR------- 295
M+E RG + V + S + +A +L K ++L +HNK S
Sbjct: 637 EMIE--RGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDL 694
Query: 296 ------------------------AYDFVITQYAACGNKDDVLRVWK-RYKQNLKVYNRG 330
Y+ I G D+ V + N
Sbjct: 695 TLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFT 754
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I + ++ A K+ +E + L +I I N LI+ C+ G + +A+ L YK
Sbjct: 755 YCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLY 814
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKG 417
+G PN T+ ++ Y + +K
Sbjct: 815 QKGLVPNAVTYNILIGCYCRIGDLDKA 841
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDR 181
I +D + K +++A S + + + LP Y L++A + + + ++A + +M ++
Sbjct: 722 IAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEK 781
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
GL+ YN+++N + GN + L +++ +KG+ + T++IL+ D
Sbjct: 782 GLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGD 837
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 147 EKLKLP--SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
EK +P ++Y AL+N + ++A+ + ++ +GLV + YN ++ Y + G+
Sbjct: 780 EKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLD 839
Query: 205 KLDSLMHEMEEKGI 218
K L +M E+GI
Sbjct: 840 KASRLREKMTEEGI 853
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 128/290 (44%), Gaps = 15/290 (5%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K + + A +F + K P+V Y AL+N + A ++ M + +
Sbjct: 300 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 359
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
I Y+++++ + + G + L EM ID D T+S L++ + ++
Sbjct: 360 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 419
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVIT 302
+ +M +G + D Y T +G+ KA + + + R+ S+ ++ N + Y+ +I
Sbjct: 420 MFDLM-VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT--YNTLIQ 476
Query: 303 QYAACGNKDDVLRVWKRY-----KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
+ G+ D + + ++ YN ++ L +E A IFE+ + R
Sbjct: 477 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYN----ILLGGLCDNGELEKALVIFEDMQKR 532
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+ DI +I C+ G + +A +L L+G +P++ T+ M +G
Sbjct: 533 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 582
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 148/357 (41%), Gaps = 14/357 (3%)
Query: 68 VPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV--AIR 125
V L+DQ G + +I L+ + S A+ + M K P V +
Sbjct: 785 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG---CQPDLVTYGVV 841
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGL 183
++ + K + A + N + + P V I +++ K + A + ++M +G+
Sbjct: 842 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 901
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ Y+S+++ G + L+ +M E+ I+ D +TFS L+ A +K
Sbjct: 902 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 961
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR--AYDFVI 301
+ M R + Y++ +G+ D+A + E ++ + F Y+ +I
Sbjct: 962 LYDEM-VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF---EFMVSKHCFPDVVTYNTLI 1017
Query: 302 TQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLC 360
+ ++ + V++ Q V N Y +I L + + A++IF+E S +
Sbjct: 1018 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 1077
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+I N L+D C+ G L KA + Q EP + T+ +M G + + E G
Sbjct: 1078 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 1134
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 119/273 (43%), Gaps = 13/273 (4%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
+LLN Y +K +A ++ QM G T+ +N++++ + + +L+ M K
Sbjct: 770 SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 829
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR---GVVLDWTVYATAASGYVKAGL 273
G D T+ ++++ D + ++ ME + GV+ +Y T G K
Sbjct: 830 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL----IYNTIIDGLCKYKH 885
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK---RYKQNLKVYNRG 330
D AL + ++ E + Y +I+ G D R+ K N V+
Sbjct: 886 MDDALNLFKEMETKGIRPNVV-TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT-- 942
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
+ +I + +K + AEK+++E R++ I + LI+ +C L +A+ +
Sbjct: 943 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 1002
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ P+V T+ + G+ + + E+G+E ++
Sbjct: 1003 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 1035
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 167/405 (41%), Gaps = 29/405 (7%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
L+D+ V +G D+ +++ L KR L ++ + K L P + +D
Sbjct: 822 LIDRMVAKGCQPDLVTYGVVVNG--LCKRGDTDLAFNL-LNKMEQGKLEPGVLIYNTIID 878
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+ K + ++ A + F + K P+V Y +L++ A ++ M +R +
Sbjct: 879 GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 938
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
++++++ + + G + + L EM ++ ID T+S L++ + +D+
Sbjct: 939 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH---DRLDEAK 995
Query: 246 AMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVIT 302
M E + D Y T G+ K ++ + V R+ S+ ++ N + Y+ +I
Sbjct: 996 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT--YNILIQ 1053
Query: 303 QYAACGNKDDVLRVWKR-----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
G+ D ++K N+ YN ++ L K +E A +FE +
Sbjct: 1054 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT----LLDGLCKNGKLEKAMVVFEYLQRS 1109
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ I N +I+ C+ G + L L+G +P+V + M +G+ + E+
Sbjct: 1110 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 1169
Query: 418 VEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIK 462
K+ + E GT P+ C + ++ D E + IK
Sbjct: 1170 DALFKE---MKEDGTL--PNSGCYNTLIRARLRDGDREASAELIK 1209
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 114/277 (41%), Gaps = 44/277 (15%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PS+ Y +L+N + ++A+ + + M + + YN+++ + + YK+++
Sbjct: 973 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK---YKRVEEG 1029
Query: 210 MH---EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAAS 266
M EM ++G+ + T++IL+ A D + +I M +D GV + Y T
Sbjct: 1030 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLD 1088
Query: 267 GYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKV 326
G K G +KA+ V+ +Y +R K +
Sbjct: 1089 GLCKNGKLEKAM---------------------VVFEY------------LQRSKMEPTI 1115
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
Y Y +I + K +E +F + + D+ N +I +CR+G +A+ L
Sbjct: 1116 YT--YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 1173
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ + GT PN + + L++ E E +K+
Sbjct: 1174 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 1210
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 148/393 (37%), Gaps = 97/393 (24%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
I++A F+ + K L V Y L+N + AK E + ++M RGLV T+ YN+
Sbjct: 414 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 473
Query: 193 MMNVYYQTGNYKKLDS-----------------------------------LMHEMEEKG 217
++ ++Q G+ K + +M+++
Sbjct: 474 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 533
Query: 218 IDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL--S 274
+D D T++ ++ C E ++ + +G+ D Y T SG GL
Sbjct: 534 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL--SLKGLKPDIVTYTTMMSGLCTKGLLHE 591
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDF-----VITQYAACGNKDDVLR-----VWKR----- 319
+AL K E LM ++ D +I + +CG +L+ V K+
Sbjct: 592 VEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLL 651
Query: 320 ----------YKQNLK-------------------VYNRGYICVI------SSLLKFDGM 344
Y++ L V +R + +I S++ K +
Sbjct: 652 RAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKF 711
Query: 345 ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
+ + E+ ++ + H+ + LI+ +CRR L A ++ K G EPN+ T +
Sbjct: 712 DVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSL 771
Query: 405 ATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPS 437
GY + + + V + + V T ++P+
Sbjct: 772 LNGYCHSKRISEAVALVDQMFV-----TGYQPN 799
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 116/294 (39%), Gaps = 32/294 (10%)
Query: 146 PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
P+++ + S L+N + A ++ +M + G + YN++++ +T
Sbjct: 256 PDRVTIGS----LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVND 311
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAA 265
E+E KGI + T++ L++ +S ++++ M + + + Y+
Sbjct: 312 AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-IKKKITPNVITYSALL 370
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG----------NKDDVLR 315
+VK G VL E+ + S D V G N+ L
Sbjct: 371 DAFVKNG------KVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 424
Query: 316 VWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
V K ++ YN +I+ K +E K+F E R L + N LI + +
Sbjct: 425 VSKGCLADVVSYNT----LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 480
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE 429
G + KA+ + G P++ T+ ++ G N + ++KALV+ E
Sbjct: 481 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE-------LEKALVIFE 527
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 148/345 (42%), Gaps = 49/345 (14%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y L+ Y+ + E+AE I ++MR++ + Y+SM++ + GN K+ +L E
Sbjct: 288 ATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDE 347
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M ++ I + +T+ L+ A E + ++ M++ +GV L+ ++ T GY + G
Sbjct: 348 MSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQS-KGVDLNLVIFNTTMDGYCRRG 406
Query: 273 LSDKAL---AVLRKSEV-------------LMMHNKFSRA------------------YD 298
D+AL A++ K + L +++ A +
Sbjct: 407 KMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFT 466
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESR 357
I Y GN + R+++ ++ +V N Y +I + K + ++ A KI E ++
Sbjct: 467 MFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINK 526
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
L D+ + LI C G + +A L + +L+G NV T+ M +G + ++++
Sbjct: 527 GLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEA 586
Query: 418 V----EAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGAD 458
E MK L+ P + +G + K G D
Sbjct: 587 FKLYDEMMKIGLI---------PDDRVFTSLVGSFHKPLTHAGLD 622
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 145/335 (43%), Gaps = 34/335 (10%)
Query: 98 RFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFN-CVPEKLKLPSV-- 154
RF H M + + F + + + +D++ + +E+A + V + + P+V
Sbjct: 201 RFFHR------MVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFT 254
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y LLNAY K + + I++ M +V Y+ ++ Y +G+ ++ + + EM
Sbjct: 255 YNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMR 314
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAG 272
EK I+ D Y +S ++S + + + A+ + + R +V + Y G KAG
Sbjct: 315 EKNIEMDVYVYSSMISWSRRLGN---MKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAG 371
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYD-----FVITQYAAC--GNKDDVLR---VWKRYKQ 322
+ A E+L++ + S+ D F T C G D+ LR + ++
Sbjct: 372 QMEAA-------EILLLEMQ-SKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGI 423
Query: 323 NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
N V+ Y + + L K + A+ I + + ++ I+ YC+ G L +A
Sbjct: 424 NADVFT--YNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEA 481
Query: 383 ETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
E L + +G PN+ T+ + Y + + ++
Sbjct: 482 ERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQA 516
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 130/298 (43%), Gaps = 11/298 (3%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I +D ++ GI +A + + E+ PSV + L+N + +A +++ +R +
Sbjct: 521 IMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLK 580
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
GLV + Y ++MN Y + GN +++ +HEME + T+++L+ +
Sbjct: 581 GLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHES 640
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN--KFSRAYDF 299
+++ M A +G++ D Y T + K KAL + ++++HN Y
Sbjct: 641 LQLLEYMYA-KGLLPDSVTYNTIIQCFCKGKEITKALQLY---NMMLLHNCDPTQVTYKV 696
Query: 300 VITQYAACGNKDDVLR-VWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
+I G+ DV R V +N+ + Y+ +I + + A F + ++
Sbjct: 697 LINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKG 756
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ--NNQS 414
IR + +I+ C+RGL+ +A+ G P+ + + Q NN S
Sbjct: 757 FVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSS 814
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 106/244 (43%), Gaps = 9/244 (3%)
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS 230
A ++Q+M +GL + Y +++ + Q GN ++ L E +G + +++LLS
Sbjct: 360 ARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLS 419
Query: 231 ACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL--M 288
E + ME R + D+ VY+ G K G +A + + +
Sbjct: 420 CLCKVGRIEEALTLFDEMETLR-LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKF 478
Query: 289 MHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK--QNLKVYNRGYICVISSLLKFDGMES 346
H+ RA + + + W R +++ +YN +I ++ DG+
Sbjct: 479 PHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYN----IMIDGYVRLDGIAE 534
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
A +++ + R + + N LI+ +CRRG L +A ++ +L+G P+V T+ +
Sbjct: 535 AMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMN 594
Query: 407 GYLQ 410
Y +
Sbjct: 595 AYCE 598
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 123/296 (41%), Gaps = 7/296 (2%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
I G+ + CVP + Y LLN Y + + +M+
Sbjct: 334 IRHAMGVFRQMQEARCVPNAV----TYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVG 389
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMM 248
YN ++ V+ + G +K++ +L H+M E+ ++ + T+ L+ AC E KI+ M
Sbjct: 390 TYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHM 449
Query: 249 EADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG 308
+ ++G+V Y Y +A ++AL V+ + M Y+ +I +A G
Sbjct: 450 D-EKGIVPSTKAYTGVIEAYGQAASYEEAL-VMFNTMNEMGSKPTVETYNSLINMFARGG 507
Query: 309 -NKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
K+ +WK + + + VI + E A K + E E D R
Sbjct: 508 LYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFE 567
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
++ YC GL+ ++E + + G P+V + +M Y ++N+ + E + +
Sbjct: 568 AVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDE 623
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 112/262 (42%), Gaps = 18/262 (6%)
Query: 147 EKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
EK +PS Y ++ AY A S E+A ++ M + G YNS++N++ + G YK
Sbjct: 451 EKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYK 510
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
+ +++M +M E G+ D+ +F+ ++ E K +E R D +
Sbjct: 511 ESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKAR-FQPDERTFEAV 569
Query: 265 ASGYVKAGLSDKA---LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK 321
S Y AGL D++ +R S +L Y +I YA DD V
Sbjct: 570 LSVYCTAGLVDESEEQFREIRASGIL----PSVMCYCMMIAVYARSNRWDDAYEVLDEMV 625
Query: 322 QNLKVYNRGYICVISSLLKFD-----GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRR 376
N KV N V+ ++K D + E +F++ S +R N L++A
Sbjct: 626 TN-KVSN--IHQVVGKMMKGDYDDYSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEALWWL 682
Query: 377 GLLHKAETLIYKAQLRGTEPNV 398
G +A ++ +A RG P +
Sbjct: 683 GQKERAARVLSEAIKRGLFPEL 704
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 148/366 (40%), Gaps = 46/366 (12%)
Query: 75 VEEGR-PLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKS--NFVLTPADVAIRLDLIAK 131
VE+G+ D+E L I K L R S A + ++ K S +F L + A R D
Sbjct: 68 VEKGKYSYDVETL--INKLSSLPPRGSIARCLEIFKNKLSLNDFALVFKEFAQRGDWQRS 125
Query: 132 VQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYN 191
++ + C P + +Y +++ EK+ I ++M G+ + Y
Sbjct: 126 LRLFKYMQRQIWCKPNE----HIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYT 181
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS-DGEGIDKIVAMMEA 250
+++N Y + G Y+ L+ M+++ + T++ ++++CA + EG+ + A M
Sbjct: 182 ALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRH 241
Query: 251 DRGVVLDWTVYATAASGYVKAGLSDKALAVLRK----------------SEVLMMHNKFS 294
+ G+ D Y T + GL D+A V R E NK
Sbjct: 242 E-GIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLE 300
Query: 295 R------------------AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVIS 336
+ +Y+ ++ YA+ G+ + V+++ ++ V N ++
Sbjct: 301 KVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLL 360
Query: 337 SLLKFDG-MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
+L G + ++F E + N D+ N LI+ + G + TL + E
Sbjct: 361 NLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVE 420
Query: 396 PNVRTW 401
PN+ T+
Sbjct: 421 PNMGTY 426
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 126/331 (38%), Gaps = 43/331 (12%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y LLNA A ++AE++ + M + G+V Y +++ + + +K+ L+ EM
Sbjct: 250 TYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEM 309
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E G D ++++LL A A+ D + M+ R V + Y+ + Y G
Sbjct: 310 ESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEAR-CVPNAVTYSMLLNLYGGHGR 368
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVY- 327
D + + +V Y+ +I + G +V+ ++ + + N+ Y
Sbjct: 369 YDDVRELFLEMKVSNTEPDVG-TYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYE 427
Query: 328 ------------------------------NRGYICVISSLLKFDGMESAEKIFEEWESR 357
+ Y VI + + E A +F
Sbjct: 428 GLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEM 487
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ N LI+ + R GL ++E +++K G + ++ + GY Q Q E+
Sbjct: 488 GSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEA 547
Query: 418 VEAMKKALVLLEAGTRWKPSKECLAACLGYY 448
+ K V LE R++P + A L Y
Sbjct: 548 I----KTYVELEK-ARFQPDERTFEAVLSVY 573
>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 106/264 (40%), Gaps = 44/264 (16%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y L++ +AE + +QM+D G+ YN +M+ Y +T N K+ L M
Sbjct: 223 IYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGM 282
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ G+ + TF IL+ A + + M A GVV + V+ + GY KAG
Sbjct: 283 LDDGLQPNVVTFGILIDALCKVRELLAARRFFVQM-AKFGVVPNVVVFNSLIDGYSKAG- 340
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
C D+L +++K + V+ Y
Sbjct: 341 --------------------------------NCSEATDLLLEMEKFKISPDVFT--YSI 366
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA---- 389
+I + + +E A+ I + E + + + N LID YC+ G + KA I+KA
Sbjct: 367 LIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALE-IFKATKFF 425
Query: 390 ---QLRGTEPNVRTWYLMATGYLQ 410
+ G P+ + +M G+L
Sbjct: 426 SDMRRNGLRPDALAYAVMLQGHLN 449
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 3/164 (1%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
+ +D K ++QA + + + P+V + L++A + A QM
Sbjct: 261 VLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKF 320
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
G+V + +NS+++ Y + GN + L+ EME+ I D +T+SIL+ E
Sbjct: 321 GVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEA 380
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
D I+ ME + GV + VY + GY K G +KAL + + ++
Sbjct: 381 DDILKRMEKE-GVPANSVVYNSLIDGYCKEGNMEKALEIFKATK 423
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 108/271 (39%), Gaps = 11/271 (4%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
ALLN S + + M R L + YN +++ + G+ + SL+ EM +K
Sbjct: 156 ALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKK 215
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
GI+ ++ L+ + S + + M+ D GV + Y GY K +
Sbjct: 216 GIEPTVVIYTTLIHGLCSESKLMEAESMFRQMK-DSGVFPNLYTYNVLMDGYCKTANVKQ 274
Query: 277 ALAVLRKSEVLMMHNKF-SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVI 335
AL + + M+ + F I A C ++ +L + + Q K + V
Sbjct: 275 ALHLYQG----MLDDGLQPNVVTFGILIDALCKVRE-LLAARRFFVQMAKFGVVPNVVVF 329
Query: 336 SSLL----KFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+SL+ K A + E E + D+ + LI CR G + +A+ ++ + +
Sbjct: 330 NSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEK 389
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
G N + + GY + EK +E K
Sbjct: 390 EGVPANSVVYNSLIDGYCKEGNMEKALEIFK 420
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 277 ALAVLRKSEVLMMHNKFSRA-YDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVI 335
AL+ LR S KF+ + + +I ++ G D+ LRV+ + V + ++
Sbjct: 108 ALSQLRGS-------KFNPSVFGVLIIAFSEVGLVDEALRVYLKVGAFPAV--QACNALL 158
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
+ LLK + +++ SR L + N L+DA CR+G + +A++LI + +G E
Sbjct: 159 NGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIE 218
Query: 396 PNVRTWYLMATG 407
P V + + G
Sbjct: 219 PTVVIYTTLIHG 230
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 128/290 (44%), Gaps = 15/290 (5%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K + + A +F + K P+V Y AL+N + A ++ M + +
Sbjct: 197 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
I Y+++++ + + G + L EM ID D T+S L++ + ++
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVIT 302
+ +M +G + D Y T +G+ KA + + + R+ S+ ++ N + Y+ +I
Sbjct: 317 MFDLM-VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT--YNTLIQ 373
Query: 303 QYAACGNKDDVLRVWKR-----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
+ G+ D + + ++ YN ++ L +E A IFE+ + R
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYN----ILLGGLCDNGELEKALVIFEDMQKR 429
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+ DI +I C+ G + +A +L L+G +P++ T+ M +G
Sbjct: 430 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 115/294 (39%), Gaps = 32/294 (10%)
Query: 146 PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
P+++ + S L+N + A ++ +M + G + YN++++ +T
Sbjct: 153 PDRVTIGS----LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVND 208
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAA 265
E+E KGI + T++ L++ +S ++++ M + + + Y+
Sbjct: 209 AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-IKKKITPNVITYSALL 267
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG----------NKDDVLR 315
+VK G VL E+ + S D V G N+ L
Sbjct: 268 DAFVKNG------KVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 316 VWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
V K ++ YN +I+ K +E K+F E R L + N LI + +
Sbjct: 322 VSKGCLADVVSYNT----LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE 429
G + KA+ + G P++ T+ ++ G N + E KALV+ E
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE-------KALVIFE 424
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 134/312 (42%), Gaps = 32/312 (10%)
Query: 135 IEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+ A S FNC+ + P + +L + +K + Q+M RG+ +++N
Sbjct: 51 VVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNI 110
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI---DKIVAMM 248
++N + Q G S++ ++ + G + D T + + C + + DK+VA+
Sbjct: 111 LINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVAL- 169
Query: 249 EADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG 308
G LD Y T +G K G + AL +LR+ + ++ Y +I
Sbjct: 170 ----GFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVV-MYSTIIDSMCKDK 224
Query: 309 NKDDVLRVW-----KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
N +D ++ +R N+ Y+ +IS ++ A +F + S N+ D+
Sbjct: 225 NVNDAFDLYSEMVSRRISSNIVTYSA----LISGFCIVGKLKDAIGLFNKMTSENINPDV 280
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY-----------LQNN 412
N L+DA+C+ G + +A+ + +G +P++ T+ + GY + N
Sbjct: 281 YTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNT 340
Query: 413 QSEKGVEAMKKA 424
S +GV A ++
Sbjct: 341 MSHRGVTATVRS 352
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 126/282 (44%), Gaps = 19/282 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y ++++ K+ A + +M R + + Y+++++ + G K L ++M
Sbjct: 212 MYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKM 271
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ I+ D YTF+IL+ A C E + + MM+ +G+ D Y + GY
Sbjct: 272 TSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMK--QGIKPDIVTYNSLMDGYCLVN 329
Query: 273 LSDKALAVLRKSEVLMMHNKFS---RAYDFVITQYAACGNKDDVLRVWK--RYKQ---NL 324
+ A ++L M H + R+Y+ VI + D ++++K +KQ N+
Sbjct: 330 EVNMAKSILNT----MSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNV 385
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
YN +I L K + A ++ + R DI + ++DA C+ L+ KA
Sbjct: 386 ITYNS----LIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIA 441
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
L+ K + +G PN+ T+ ++ G + + E + LV
Sbjct: 442 LLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLV 483
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 130/293 (44%), Gaps = 25/293 (8%)
Query: 122 VAIRLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMR 179
V I +D + K Q ++ A S F + K P Y +L+ ++A + +QM
Sbjct: 447 VNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQML 506
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
D + + Y S++ +++ G + + +EM G D + + A +
Sbjct: 507 DANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGE-- 564
Query: 240 GIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKA--LAVLRKSEVLMMHNKFSR 295
I+K A+ + + G + D Y G VKAG + +A L K + ++ +R
Sbjct: 565 -IEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLD---TR 620
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-------YICVISSLLKFDGMESAE 348
AY+ VI + G +V K Y+ ++ +G Y VI L K D ++ A
Sbjct: 621 AYNTVIDGFCKSG------KVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAY 674
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+FEE +S+ + ++ I + LID + + G + +A ++ + +G PNV TW
Sbjct: 675 MLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 727
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 116/256 (45%), Gaps = 10/256 (3%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y L+ A + ++ ++ + QQM++ G + +++ V+ + G SL+ E
Sbjct: 201 SAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDE 260
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M+ ++ D +++ + A + K M+A+ G+VLD Y + KA
Sbjct: 261 MKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKAN-GLVLDDVTYTSMIGVLCKAD 319
Query: 273 LSDKALAVLRKSEVLMMHNK---FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN- 328
++A+ + M NK + AY+ +I Y G +D + +R ++ + +
Sbjct: 320 RLNEAVELFEH----MDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSV 375
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y C++S L + ++ A K FEE + ++ ++ N +ID C+ G L A +
Sbjct: 376 VSYNCILSCLGRKGQVDEALKKFEEMK-KDAIPNLSTYNIMIDMLCKAGKLETALVVRDA 434
Query: 389 AQLRGTEPNVRTWYLM 404
+ G PNV T +M
Sbjct: 435 MKDAGLFPNVITVNIM 450
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 13/260 (5%)
Query: 154 VYIALL-NAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
VY +L+ N + C + E I +M G + N+ M+ ++ G +K +L E
Sbjct: 516 VYTSLIRNFFKCGRK-EDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQE 574
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
++ G D +++IL+ A ++ M+ ++G VLD Y T G+ K+G
Sbjct: 575 IKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMK-EQGCVLDTRAYNTVIDGFCKSG 633
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVY 327
+KA +L + + H Y VI A D+ +++ K N+ +Y
Sbjct: 634 KVNKAYQLLEEMKT-KGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIY 692
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
+ +I K ++ A I EE + L ++ N L+DA + + +A
Sbjct: 693 SS----LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQ 748
Query: 388 KAQLRGTEPNVRTWYLMATG 407
+ PN T+ ++ G
Sbjct: 749 SMKDLKCTPNYITYSILIHG 768
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 102/258 (39%), Gaps = 19/258 (7%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y +++ A E A ++ M+D GL I N M++ + S+
Sbjct: 410 STYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEG 469
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
++ K D T+ L+ + K+ M D + + VY + + K G
Sbjct: 470 LDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQM-LDANQIPNAVVYTSLIRNFFKCG 528
Query: 273 LSDKALAVLRKSEVLMMHNKFSR---AYDFVI-TQYAACGNKDDVLRVWKRYKQNLKVYN 328
RK + ++N+ R + D ++ Y C K + + Q +K
Sbjct: 529 ---------RKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579
Query: 329 -----RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
R Y +I L+K A ++F + + D R N +ID +C+ G ++KA
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639
Query: 384 TLIYKAQLRGTEPNVRTW 401
L+ + + +G EP V T+
Sbjct: 640 QLLEEMKTKGHEPTVVTY 657
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 123/311 (39%), Gaps = 44/311 (14%)
Query: 99 FSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YI 156
F+H + K+ VL +D K + +A + K P+V Y
Sbjct: 599 FAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYG 658
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
++++ A ++A ++ ++ + +G+ + Y+S+++ + + G + +M E+ +K
Sbjct: 659 SVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQK 718
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAGLS 274
G+ + YT++ LL A A E I + + ++ D ++ Y+ G K
Sbjct: 719 GLTPNVYTWNCLLDALVKA---EEISEALVCFQSMKDLKCTPNYITYSILIHGLCKI--- 772
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYIC 333
KF++A+ F W+ KQ K Y
Sbjct: 773 ----------------RKFNKAFVF-----------------WQEMQKQGFKPNVFTYTT 799
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+IS L K + A+ +FE+++ + D I N +I+ A L +A+L+G
Sbjct: 800 MISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859
Query: 394 TEPNVRTWYLM 404
+T ++
Sbjct: 860 CSIYTKTCVVL 870
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 114/271 (42%), Gaps = 21/271 (7%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP ++ +Y L+N Y E A QM+ R + I YN+++N +
Sbjct: 187 VPTRV----IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERIT 242
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
L+ EM++ G++ TF+ L+ A E +++ M+ + G+ + Y +
Sbjct: 243 NAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ-ENGLKPNVVSYGSI 301
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYK 321
+ + K G +A+A+L M H ++ Y+ +I Y G D + ++ K
Sbjct: 302 VNAFCKNGKIPEAVAILDD----MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK 357
Query: 322 QN-----LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRR 376
N + YN +I L + AE+I + L D N LI A C R
Sbjct: 358 SNGISPSIVTYN----LLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYR 413
Query: 377 GLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
G + KA L + G + VRT++ + +G
Sbjct: 414 GNIDKALDLQQRMHKYGIKSTVRTYHQLISG 444
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 123/284 (43%), Gaps = 5/284 (1%)
Query: 138 AASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMN 195
A F+ + E+ LP+ Y +++ + E + QM GL I YN +++
Sbjct: 34 AVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLS 93
Query: 196 VYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVV 255
+ G + +L+ EM + + D +T+SIL + D + + + + +
Sbjct: 94 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTI 153
Query: 256 LDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLR 315
D+T + +G K G A VL +S V Y+ +I Y G +
Sbjct: 154 GDYTC-SILLNGLCKDGKVSIAEEVL-QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFS 211
Query: 316 VWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
+ + K +++K + Y +I+ L K + + +A+ + E + + + N LIDAY
Sbjct: 212 TFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYG 271
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
R G L K ++ + Q G +PNV ++ + + +N + + V
Sbjct: 272 RTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 315
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 119/272 (43%), Gaps = 15/272 (5%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+ AY E+A IM M D+GL YN+++N + G Y + ++ EM
Sbjct: 4 YNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML 63
Query: 215 EKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
G+ D T+ ++L+ +C + E + M+ +GVV D +++ + + +
Sbjct: 64 NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLR--QGVVPDLVSFSSLMAVFSRNRH 121
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQ-----YAACGNKDDVLRVW-KRYKQNLKVY 327
D+AL R + KF D VI Y GN + L++ + +Q +
Sbjct: 122 LDQALVYFRDMK------KFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLD 175
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y +++ L K + A+K+F+E R D LI +C+ G + KA +L
Sbjct: 176 VIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFG 235
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
R +P++ + + G+ + + EK E
Sbjct: 236 TMTQRNIKPDIVAYNTLIDGFCKVGEMEKASE 267
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 134/335 (40%), Gaps = 52/335 (15%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+E+A N + +K PS+ Y A++N +A+ I+ +M + GL T YN+
Sbjct: 17 LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNT 76
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
++ + N+ + + EM +G+ D +FS L+ A S +D+ + +
Sbjct: 77 LLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLM---AVFSRNRHLDQALVYFRDMK 133
Query: 253 --GVVLDWTVYATAASGYVKAGLSDKALAV----------------------LRKSEVLM 288
G+V D +Y GY + G +AL + L K ++L
Sbjct: 134 KFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLT 193
Query: 289 MHNKF----------SRAYDFVITQYAAC--GNKDDVLRVWKRYKQ-NLKVYNRGYICVI 335
+K Y F + C GN L ++ Q N+K Y +I
Sbjct: 194 DADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLI 253
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH-----LIDAYCRRGLLHKAETLIYKAQ 390
K ME A ++++ SR + PNH LI+AYC G + +A L
Sbjct: 254 DGFCKVGEMEKASELWDGMISRKI-----FPNHITYGILINAYCSVGHVSEAFRLWDVMI 308
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
+G +P + T + GY ++ S K E + + +
Sbjct: 309 EKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMI 343
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 105/254 (41%), Gaps = 7/254 (2%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP+ + S L+ ++ + ++A + + M+ GLV + Y +M+ Y + GN
Sbjct: 103 VPDLVSFSS----LMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNML 158
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
+ + EM E+G D ++ +L+ DK+ M +RG + D+ + T
Sbjct: 159 EALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM-VERGALPDFYTFTTL 217
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
G+ + G KAL++ + AY+ +I + G + +W
Sbjct: 218 IHGHCQDGNMTKALSLFGTMTQRNIKPDIV-AYNTLIDGFCKVGEMEKASELWDGMISRK 276
Query: 325 KVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
N Y +I++ + A ++++ + + + N +I YCR G KA+
Sbjct: 277 IFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKAD 336
Query: 384 TLIYKAQLRGTEPN 397
+ + +G P+
Sbjct: 337 EFLGRMIAKGVAPD 350
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 7/165 (4%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
L D+ VE G D +I + AL + MT+++ + P VA +D
Sbjct: 198 LFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN---IKPDIVAYNTLID 254
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
KV +E+A+ ++ + + P+ Y L+NAY +A + M ++G+
Sbjct: 255 GFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKP 314
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS 230
+ N+++ Y ++G+ K D + M KG+ D +++ L++
Sbjct: 315 TLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 130/293 (44%), Gaps = 25/293 (8%)
Query: 122 VAIRLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMR 179
V I +D + K Q ++ A S F + K P Y +L+ ++A + +QM
Sbjct: 447 VNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQML 506
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
D + + Y S++ +++ G + + +EM G D + + A +
Sbjct: 507 DANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGE-- 564
Query: 240 GIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKA--LAVLRKSEVLMMHNKFSR 295
I+K A+ + + G + D Y G VKAG + +A L K + ++ +R
Sbjct: 565 -IEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLD---TR 620
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-------YICVISSLLKFDGMESAE 348
AY+ VI + G +V K Y+ ++ +G Y VI L K D ++ A
Sbjct: 621 AYNTVIDGFCKSG------KVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAY 674
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+FEE +S+ + ++ I + LID + + G + +A ++ + +G PNV TW
Sbjct: 675 MLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 727
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 116/256 (45%), Gaps = 10/256 (3%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y L+ A + ++ ++ + QQM++ G + +++ V+ + G SL+ E
Sbjct: 201 SAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDE 260
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M+ ++ D +++ + A + K M+A+ G+VLD Y + KA
Sbjct: 261 MKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKAN-GLVLDDVTYTSMIGVLCKAD 319
Query: 273 LSDKALAVLRKSEVLMMHNK---FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN- 328
++A+ + M NK + AY+ +I Y G +D + +R ++ + +
Sbjct: 320 RLNEAVELFEH----MDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSV 375
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y C++S L + ++ A K FEE + ++ ++ N +ID C+ G L A +
Sbjct: 376 VSYNCILSCLGRKGQVDEALKKFEEMK-KDAIPNLSTYNIMIDMLCKAGKLETALVVRDA 434
Query: 389 AQLRGTEPNVRTWYLM 404
+ G PNV T +M
Sbjct: 435 MKDAGLFPNVITVNIM 450
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 108/256 (42%), Gaps = 5/256 (1%)
Query: 154 VYIALL-NAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
VY +L+ N + C + E I +M G + N+ M+ ++ G +K +L E
Sbjct: 516 VYTSLIRNFFKCGRK-EDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQE 574
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
++ G D +++IL+ A ++ M+ ++G VLD Y T G+ K+G
Sbjct: 575 IKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMK-EQGCVLDTRAYNTVIDGFCKSG 633
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGY 331
+KA +L + + H Y VI A D+ +++ K + +++ Y
Sbjct: 634 KVNKAYQLLEEMKT-KGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIY 692
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I K ++ A I EE + L ++ N L+DA + + +A +
Sbjct: 693 SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKD 752
Query: 392 RGTEPNVRTWYLMATG 407
PN T+ ++ G
Sbjct: 753 LKCTPNYITYSILIHG 768
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 102/258 (39%), Gaps = 19/258 (7%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y +++ A E A ++ M+D GL I N M++ + S+
Sbjct: 410 STYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEG 469
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
++ K D T+ L+ + K+ M D + + VY + + K G
Sbjct: 470 LDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQM-LDANQIPNAVVYTSLIRNFFKCG 528
Query: 273 LSDKALAVLRKSEVLMMHNKFSR---AYDFVI-TQYAACGNKDDVLRVWKRYKQNLKVYN 328
RK + ++N+ R + D ++ Y C K + + Q +K
Sbjct: 529 ---------RKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579
Query: 329 -----RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
R Y +I L+K A ++F + + D R N +ID +C+ G ++KA
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639
Query: 384 TLIYKAQLRGTEPNVRTW 401
L+ + + +G EP V T+
Sbjct: 640 QLLEEMKTKGHEPTVVTY 657
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 123/311 (39%), Gaps = 44/311 (14%)
Query: 99 FSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YI 156
F+H + K+ VL +D K + +A + K P+V Y
Sbjct: 599 FAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYG 658
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
++++ A ++A ++ ++ + +G+ + Y+S+++ + + G + +M E+ +K
Sbjct: 659 SVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQK 718
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAGLS 274
G+ + YT++ LL A A E I + + ++ D ++ Y+ G K
Sbjct: 719 GLTPNVYTWNCLLDALVKA---EEISEALVCFQSMKDLKCTPNYITYSILIHGLCKI--- 772
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYIC 333
KF++A+ F W+ KQ K Y
Sbjct: 773 ----------------RKFNKAFVF-----------------WQEMQKQGFKPNVFTYTT 799
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+IS L K + A+ +FE+++ + D I N +I+ A L +A+L+G
Sbjct: 800 MISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859
Query: 394 TEPNVRTWYLM 404
+T ++
Sbjct: 860 CSIYTKTCVVL 870
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 156/358 (43%), Gaps = 16/358 (4%)
Query: 68 VPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR-- 125
V L+DQ V+ G D+ ++ L KR L +S+ KK ADV I
Sbjct: 205 VALVDQMVQRGCQPDLVTYGAVVNG--LCKRGDIDLALSLL--KKMEKGKIEADVVIYNT 260
Query: 126 -LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRG 182
+D + K + I+ A + FN + K P V Y +L++ A ++ M +R
Sbjct: 261 IIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK 320
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI 241
+ + ++++++ + + G + + L EM ++ ID D +T+S L++ C E
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFV 300
M+ D + Y T G+ KA ++ + + R+ S+ ++ N + Y+ +
Sbjct: 381 HMFELMISKD--CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT--YNTL 436
Query: 301 ITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
I G+ D +++K+ + Y ++ L K+ +E A +FE + +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
DI N +I+ C+ G + L L+G +PNV + M +G+ + E+
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 149/365 (40%), Gaps = 30/365 (8%)
Query: 68 VPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKS------------NF 115
V L+DQ VE G D +I L+ + S A+ + M ++ N
Sbjct: 170 VALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNG 229
Query: 116 VLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIM 175
+ D+ + L L+ K++ + A +Y +++ K + A +
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVV-----------IYNTIIDGLCKYKHIDDAFALF 278
Query: 176 QQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAA 235
+M +G+ YNS+++ G + L+ M E+ I+ + TFS L+ A
Sbjct: 279 NKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKE 338
Query: 236 SDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR 295
+K+ M R + D Y++ +G+ D+A + E+++ + F
Sbjct: 339 GKLVEAEKLYDEM-IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF---ELMISKDCFPN 394
Query: 296 A--YDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFE 352
Y+ +I + ++ + +++ Q V N Y +I L + + A+KIF+
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
+ S + DI + L+D C+ G L KA + Q EP++ T+ +M G +
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Query: 413 QSEKG 417
+ E G
Sbjct: 515 KVEDG 519
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 120/276 (43%), Gaps = 19/276 (6%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
+LLN Y +K A ++ QM + G T+ +N++++ + + +L+ +M ++
Sbjct: 155 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQR 214
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
G D T+ +++ D + ++ ME + + D +Y T G K D
Sbjct: 215 GCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIYNTIIDGLCKYKHIDD 273
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAAC----GNKDDVLR-----VWKRYKQNLKVY 327
A A+ K M K R F +C G D R + ++ N+ +
Sbjct: 274 AFALFNK-----METKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTF 328
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
+ +I + +K + AEK+++E R++ DI + LI+ +C L +A+ +
Sbjct: 329 S----ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ PNV T+ + G+ + + E+G+E ++
Sbjct: 385 LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 111/275 (40%), Gaps = 49/275 (17%)
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVA 246
+++N +++ + + + SL M+ I D Y+++IL++ C + + +
Sbjct: 81 VEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGK 140
Query: 247 MMEADRGVVLDWTVYATAASGYVKAG-LSDKALAVLRKSEV---------------LMMH 290
MM+ G D ++ +GY + +SD V + E+ L +H
Sbjct: 141 MMKL--GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLH 198
Query: 291 NKFSRAYDFV-----------ITQYAAC-------GNKDDVLRVWKRYKQ-----NLKVY 327
NK S A V + Y A G+ D L + K+ ++ ++ +Y
Sbjct: 199 NKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
N +I L K+ ++ A +F + E++ + D+ N LI C G A L+
Sbjct: 259 NT----IIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLS 314
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
R PNV T+ + +++ K VEA K
Sbjct: 315 NMIERKINPNVVTFSALIDAFVKEG---KLVEAEK 346
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 154/376 (40%), Gaps = 54/376 (14%)
Query: 111 KKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSA 168
KK F +T + + K+ +E+ + + E P++Y L+N A
Sbjct: 179 KKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFV 238
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
+ AE + + M + + YN+M+ Y + G +K + +ME +G + DK T+ +
Sbjct: 239 DSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTM 298
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM 288
+ AC A SD + M+ ++G+ + ++ G K G ++ V
Sbjct: 299 IQACYADSDFGSCVALYQEMD-EKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFEN----- 352
Query: 289 MHNKFSRA----YDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLK--- 340
M K S+ Y +I YA G+ +D +R+ R + K Y V++ L K
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 412
Query: 341 ------------FDGM--------------------ESAEKIFEEWESRNLCHDIRIPNH 368
FDG+ + AE++FEE + D N
Sbjct: 413 VEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 472
Query: 369 LIDAYCRRGLLHKAETLIYK-AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVL 427
LIDA+ + + +A L + + G + V T+ ++ +G + +++E EA+K ++
Sbjct: 473 LIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNE---EALKLWDMM 529
Query: 428 LEAGTRWKPSKECLAA 443
++ G P+ C A
Sbjct: 530 IDKGI--TPTAACFRA 543
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 132/292 (45%), Gaps = 7/292 (2%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K +E A F+ + + P V Y LL+ Y ++ + +M RGLV
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ + S+++ + GN ++ +L+ +M E+G+ ++ TF+ L+ G D ++A
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID--GFCKKGFLDDALLA 350
Query: 247 MMEADR-GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
+ E + G+ Y +GY K G D A ++R+ E + Y +I+ Y
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV-TYSTIISGYC 409
Query: 306 ACGNKDDVLRV-WKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
GN D ++ K K+ + Y +I L + + A ++FE + D
Sbjct: 410 KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 469
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
LID +C+ G + KA +L + +G P+V T+ ++ G ++ ++++
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 117/269 (43%), Gaps = 11/269 (4%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ +++N A E A + +M GL + YN++++ Y + G + ++ EM
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT 285
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
++G+ D TF+ L+ A A + E +VA M +RG+ ++ + G+ K G
Sbjct: 286 QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR-ERGLRMNEVTFTALIDGFCKKGFL 344
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKD---DVLRVW--KRYKQNLKVYNR 329
D AL + + + Y+ +I Y G D +++R KR K ++ Y+
Sbjct: 345 DDALLAVEEMRKCGIQPSVV-CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
+IS K ++SA ++ ++ + + D + LI C L+ A L
Sbjct: 404 ----IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 459
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
G +P+ T+ + G+ + EK +
Sbjct: 460 LQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 118/280 (42%), Gaps = 10/280 (3%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+VY L+ A E+A ++ MR G + YN+++ + + G + +
Sbjct: 150 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 209
Query: 210 MHEMEEKG-IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ M E+G + TF+ +++ A EG K+ M G+ D Y T SGY
Sbjct: 210 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM-VREGLAPDVVSYNTLLSGY 268
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC--GNKDD-VLRVWKRYKQNLK 325
K G ++LAV + + F +A C GN + V V + ++ L+
Sbjct: 269 CKVGCLHESLAVFSE---MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLR 325
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+ + +I K ++ A EE + + N LI+ YC+ G + A L
Sbjct: 326 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 385
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
I + + + +P+V T+ + +GY + + + +K L
Sbjct: 386 IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKML 425
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 162/406 (39%), Gaps = 80/406 (19%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+ D+ V EG D+ ++ + +L + MT++ L P DV LI
Sbjct: 245 VFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG---LVP-DVVTFTSLI 300
Query: 130 ---AKVQGIEQAASYFNCVPEK-LKLPSV-YIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
K +EQA + + E+ L++ V + AL++ + + A + +++MR G+
Sbjct: 301 HATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQ 360
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAAS------- 236
+ YN+++N Y + G L+ EME K + D T+S ++S C +
Sbjct: 361 PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL 420
Query: 237 ------DGEGIDKIV------AMMEADR--------------GVVLDWTVYATAASGYVK 270
G D I + E R GV D Y T G+ K
Sbjct: 421 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCK 480
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSR--------AYDFVITQYAACGNKDDVLRV-WKRYK 321
G +KAL+ +H++ R Y +I + + R+ +K Y
Sbjct: 481 EGNVEKALS---------LHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYH 531
Query: 322 Q-----NLKVYNRGYICV-------ISSLLK---FDG-MESAEKIFEEWESRNLCHDIRI 365
+ N+K Y+ +C + +LLK G M+ A+K+++ RN D +
Sbjct: 532 EDPVPDNIK-YDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSV 590
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLR-GTEPNVRTWYLMATGYLQ 410
+ LI +CR G + KA + +K LR G PN + + G +
Sbjct: 591 YSILIHGHCRGGNVRKALSF-HKQMLRSGFSPNSTSTISLVRGLFE 635
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 128/290 (44%), Gaps = 15/290 (5%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K + + A +F + K P+V Y AL+N + A ++ M + +
Sbjct: 197 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
I Y+++++ + + G + L EM ID D T+S L++ + ++
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQ 316
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVIT 302
+ +M +G + D Y T +G+ KA + + + R+ S+ ++ N + Y+ +I
Sbjct: 317 MFDLM-VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT--YNTLIQ 373
Query: 303 QYAACGNKDDVLRVWKR-----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
+ G+ D + + ++ YN ++ L +E A IFE+ + R
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYN----ILLGGLCDNGELEKALVIFEDMQKR 429
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+ DI +I C+ G + +A +L L+G +P++ T+ M +G
Sbjct: 430 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 115/294 (39%), Gaps = 32/294 (10%)
Query: 146 PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
P+++ + S L+N + A ++ +M + G + YN++++ +T
Sbjct: 153 PDRVTIGS----LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVND 208
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAA 265
E+E KGI + T++ L++ +S ++++ M + + + Y+
Sbjct: 209 AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-IKKKITPNVITYSALL 267
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG----------NKDDVLR 315
+VK G VL E+ + S D V G N+ L
Sbjct: 268 DAFVKNG------KVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLM 321
Query: 316 VWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
V K ++ YN +I+ K +E K+F E R L + N LI + +
Sbjct: 322 VSKGCLADVVSYNT----LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE 429
G + KA+ + G P++ T+ ++ G N + E KALV+ E
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE-------KALVIFE 424
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 40/229 (17%), Positives = 96/229 (41%), Gaps = 19/229 (8%)
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVA 246
+D+N +++ + Y + SL +ME GI D YTF+I+++ C + +
Sbjct: 86 VDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGK 145
Query: 247 MMEADRGVVLDWTVYATAASGYVK-------AGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
M++ G D + +G+ + L DK + + K +++ AY+
Sbjct: 146 MLKL--GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV--------AYNA 195
Query: 300 VITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
+I +D +K ++ ++ Y +++ L A ++ + +
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+ ++ + L+DA+ + G + +A+ L + +P++ T+ + G
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 111/262 (42%), Gaps = 9/262 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y L+ + A ++++MR++G+ T YNS++ + + S + EM
Sbjct: 457 IYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEM 516
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E G D +T+ +S A + DK V M + GV+ + + + Y K G
Sbjct: 517 VENGFKPDAFTYGAFISGYIEAGEFASADKYVKEM-LECGVIPNKVLCTGLINEYCKKGK 575
Query: 274 SDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNR 329
+A + R M+ ++ Y ++ G +D ++ + + +
Sbjct: 576 VIEACSAFRS----MVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVF 631
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +I K M+ A IF+E L ++ I N L+ +CR G + KA+ L+ +
Sbjct: 632 SYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEM 691
Query: 390 QLRGTEPNVRTWYLMATGYLQN 411
+G PN T+ + GY ++
Sbjct: 692 SGKGFPPNAVTYCTIIDGYCKS 713
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 130/309 (42%), Gaps = 12/309 (3%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P Y + + + A I+++M G + Y +++ + Q + ++
Sbjct: 420 PYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLK 479
Query: 212 EMEEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
EM E+GI D + + S+++ A E ++ M+E G D Y SGY++
Sbjct: 480 EMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVE--NGFKPDAFTYGAFISGYIE 537
Query: 271 AGLSDKALAVLRKS-EVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYN 328
AG A +++ E ++ NK +I +Y G + ++ +Q +
Sbjct: 538 AGEFASADKYVKEMLECGVIPNKV--LCTGLINEYCKKGKVIEACSAFRSMVEQGILGDA 595
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+ Y +++ L+K + AE+IF E + + D+ LID + + G + KA ++ +
Sbjct: 596 KTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDE 655
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYY 448
G NV + ++ G+ ++ + EK E + + +G + P+ + Y
Sbjct: 656 MVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEM-----SGKGFPPNAVTYCTIIDGY 710
Query: 449 KKERDIEGA 457
K D+ A
Sbjct: 711 CKSGDLAEA 719
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 130/308 (42%), Gaps = 46/308 (14%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D +K+ +++A+S F+ + + +V I LL + + EKA+ ++ +M +G
Sbjct: 637 IDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGF 696
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ Y ++++ Y ++G+ + L EM+ KG+ D + ++ L+ C +D E
Sbjct: 697 PPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE---- 752
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALA--VLRKSEVLMMHNKFSRAYDFVI 301
R + T++ T G + AL V + + + + +R D
Sbjct: 753 --------RAI----TIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSF 800
Query: 302 TQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
++ G +DV Y +I L K +E+A+++F + NL
Sbjct: 801 DKF---GKPNDVT----------------YNIMIDYLCKEGNLEAAKELFHHMQKANLMP 841
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
+ L++ Y + G + ++ + G EP+ + ++ +L+ +
Sbjct: 842 TVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMT------- 894
Query: 422 KKALVLLE 429
KALVLL+
Sbjct: 895 TKALVLLD 902
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 121/281 (43%), Gaps = 38/281 (13%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
++KV +E++ YF + E+ LP+ Y L++ Y E AE ++Q+M D GL
Sbjct: 534 LSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPN 593
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ Y ++ Y+++ + +K+ S M ++G+ D + IL+ +++ + E ++++
Sbjct: 594 DVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLS 653
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
+E + G V D VY++ SG K +KA +L ++ S+
Sbjct: 654 GIEKN-GSVPDVHVYSSLISGLCKTADREKAFGIL---------DEMSK----------- 692
Query: 307 CGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
K N+ YN +I L K + A +F ++ L +
Sbjct: 693 -----------KGVDPNIVCYN----ALIDGLCKSGDISYARNVFNSILAKGLVPNCVTY 737
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
LID C+ G + A L + G P+ + ++ TG
Sbjct: 738 TSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 778
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 123/280 (43%), Gaps = 15/280 (5%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P VY L+ AY + + A+ ++ +MR+RG T+ YN ++ ++G ++
Sbjct: 242 PDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 301
Query: 210 MHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ME+ G+ D +T+ L++ C + E + M A+ + + VYA G+
Sbjct: 302 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAE--LKPNVVVYANLIDGF 359
Query: 269 VKAGLSDKALAVLRKSEVL-MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
++ G +D+A ++++ + NK + YD ++ G D R KQ ++
Sbjct: 360 MREGNADEAFKMIKEMVAAGVQPNKIT--YDNLVRGLCKMGQMD---RASLLLKQMVRDS 414
Query: 328 NRG----YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
+R Y +I + + A ++ E E+ + ++ + +I C+ G KA
Sbjct: 415 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 474
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
L+ + +G +PN + + +GY + E K
Sbjct: 475 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDK 514
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 103/260 (39%), Gaps = 40/260 (15%)
Query: 151 LPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
LP +Y +L+ + E++ QM++RGL+ Y+ +++ Y + G+ + +
Sbjct: 521 LPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQ 580
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
L+ M + G+ + + LL + + D E + M D+GV+LD
Sbjct: 581 LVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM-LDQGVMLD----------- 628
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
+R Y +I ++ GN + RV ++N V +
Sbjct: 629 -------------------------NRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPD 663
Query: 329 -RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y +IS L K E A I +E + + +I N LID C+ G + A +
Sbjct: 664 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 723
Query: 388 KAQLRGTEPNVRTWYLMATG 407
+G PN T+ + G
Sbjct: 724 SILAKGLVPNCVTYTSLIDG 743
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 130/340 (38%), Gaps = 45/340 (13%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P+V L++ Y + + A ++ MRDRG+ N+++ + L +
Sbjct: 174 PAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVRE 233
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
M GI D YT+S L+ A + + K++ M +RG L+ Y +G ++
Sbjct: 234 FMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMR-ERGCGLNTVTYNVLIAGLCRS 292
Query: 272 GLSDKALAV--------------------------LRKSEVLMMHNKFSRA--------Y 297
G ++A R +E + ++ S A Y
Sbjct: 293 GAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVY 352
Query: 298 DFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWES 356
+I + GN D+ ++ K ++ Y ++ L K M+ A + ++
Sbjct: 353 ANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVR 412
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ D N +I+ + R A L+ + + G PNV T+ +M G Q+ + EK
Sbjct: 413 DSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEK 472
Query: 417 GVEAMKKALVLLEAGTR--WKPSKECLAACLGYYKKERDI 454
+ LLE T KP+ A + Y +E ++
Sbjct: 473 ASD-------LLEEMTTKGLKPNAFVYAPLISGYCREGNV 505
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 131/287 (45%), Gaps = 31/287 (10%)
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
A+ + A F+ +P ++ + + A+++ Y+ ++ E AE++ QM +R + I
Sbjct: 87 ARTGDMSSARQLFDEMP--VRNTASWNAMIDGYSRLRNVESAELLFSQMPNRDI----IS 140
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA--AASDGEGIDKIVAM 247
+ +M+ Y Q +++ ++ +EM+ GID D+ T + ++SACA A D + K + +
Sbjct: 141 WTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAHLGALD---LGKEIHL 197
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC 307
+ G LD + + Y K G DK+L V K L N F ++ +I A
Sbjct: 198 YAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFK---LRKKNLF--CWNSIIEGLAVH 252
Query: 308 GNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
G ++ L ++ R ++ +K +I V+ + +E K F ++ D IP
Sbjct: 253 GYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRF-----LSMSRDFSIP 307
Query: 367 NH------LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
++D + GLL A L+ ++ EPN W + G
Sbjct: 308 PEIEHYGCMVDLLGKAGLLEDALELVRSMRM---EPNSVIWGALLGG 351
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 117/268 (43%), Gaps = 15/268 (5%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
AL+N Y +S + A + Q+ + I +NSM+ +Y Q + L M+++
Sbjct: 402 ALVNVYGRCESPDDARTVFDQLE----LPNLISWNSMIGIYVQCERHDDALQLFRTMQQQ 457
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
GI D+ F +L AC S G K+V + G+ V + + Y KAG D
Sbjct: 458 GIQPDRVNFMTILGACTIGSHGR-TRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDV 516
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVI 335
A +L++ M + A++ +I YA G + L +++ + + + V +I V+
Sbjct: 517 AEVILQE-----MDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVL 571
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
++ + + I L D+ + N L + Y + G + A + +R
Sbjct: 572 NACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIR--- 628
Query: 396 PNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ +W M Y Q+ +SE+ ++ ++K
Sbjct: 629 -SAVSWNGMLQAYAQHGESEEVLKLIRK 655
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 120/258 (46%), Gaps = 27/258 (10%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P V +L+N YA A + AE+I+Q+M ++ + +N ++N Y G ++
Sbjct: 498 PLVQTSLVNMYAKAGELDVAEVILQEMDEQQITA----WNVLINGYALHGRSREALEAYQ 553
Query: 212 EMEEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
+++ + I DK TF +L+AC +++ EG K++ + G+ D V + Y K
Sbjct: 554 KLQLEAIPVDKVTFISVLNACTSSTSLAEG--KMIHSNAVECGLDSDVIVKNALTNMYSK 611
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNR 329
G + A + M + + +++ ++ YA G ++VL++ ++ +Q +K+
Sbjct: 612 CGSMENARRIFDS-----MPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGI 666
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI---PNH---LIDAYCRRGLLHKAE 383
++ V+SS + + F +L HD I H L+D R G L +AE
Sbjct: 667 TFVSVLSSCSHAGLIAEGCQYF-----HSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAE 721
Query: 384 TLIYKAQLRGTEPNVRTW 401
I K L EP + TW
Sbjct: 722 KYISKMPL---EPGIVTW 736
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 114/283 (40%), Gaps = 17/283 (6%)
Query: 143 NCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQT 200
+CV E V++ AL+N Y S A + M R + +NSM++ Y +
Sbjct: 184 SCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGT----WNSMISAYSIS 239
Query: 201 GNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTV 260
+ + M+++G CD+ TF +L AC + K V ++ LD V
Sbjct: 240 ERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQH-GKHVRESISETSFELDLFV 298
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
+ Y + + A V + M + +IT +A G+ + LR ++
Sbjct: 299 GTALITMYARCRSPEDAAQVFGR-----MKQTNLITWSAIITAFADHGHCGEALRYFRMM 353
Query: 321 KQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
+Q + NR +I +++ G+E +I L + N L++ Y R
Sbjct: 354 QQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESP 413
Query: 380 HKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
A T+ + +L PN+ +W M Y+Q + + ++ +
Sbjct: 414 DDARTVFDQLEL----PNLISWNSMIGIYVQCERHDDALQLFR 452
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 127/282 (45%), Gaps = 28/282 (9%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
LLNA + EKAE ++++ + GL + +N+++N Y Q G+ K + + +ME G
Sbjct: 363 LLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVG 422
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
+ + T++ L+ + E +K + M ++GV+ + Y T GY ++ L D+
Sbjct: 423 LRPNHVTYNSLVKKFCEMKNMEEAEKCIKKM-VEKGVLPNVETYNTLIDGYGRSCLFDRC 481
Query: 278 LAVLRKSEVLMMHNKFSRAYDFVITQYAA---CGNKD-DVLR--------VWKRYKQNLK 325
+L + E + + Y C KD ++L V + N +
Sbjct: 482 FQILEEME--------KKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQ 533
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+YN +I ++ A + F+E +R + + N LI+ C++G + +AE L
Sbjct: 534 IYNM----LIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENL 589
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV---EAMKKA 424
+ +G +V T+ + +GY +K + E MKK+
Sbjct: 590 ASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKS 631
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 132/298 (44%), Gaps = 31/298 (10%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV------YIALLNAYACAKSAEKAEIIMQQMR 179
+D KV +E+A FN + E++K+ +V + +LLN A+ E+A+ ++++M
Sbjct: 259 IDGYCKVGQLEEA---FN-IRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEME 314
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
G V Y ++ + + + GN +L E KG+ YT SILL+A + E
Sbjct: 315 VYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNME 374
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
++++ + G+ + T +GY + G +KA + K E + + Y+
Sbjct: 375 KAEEVLKKF-LENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHV-TYNS 432
Query: 300 VITQYAACGNKDDVLRVWKRYKQ-----NLKVYNR-----GYICVISSLLKFDGMESAEK 349
++ ++ N ++ + K+ + N++ YN G C+ +
Sbjct: 433 LVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCF---------Q 483
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
I EE E + L ++ LI+ C+ + +AE ++ RG PN + + ++ G
Sbjct: 484 ILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDG 541
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 121/284 (42%), Gaps = 9/284 (3%)
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
K+ +++A C+ P V++ ++ K + AE + +M DR +
Sbjct: 193 VKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNR 252
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
I YN++++ Y + G ++ ++ M+ + ++ TF+ LL+ A E +++
Sbjct: 253 ITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEE 312
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC 307
ME G V D Y T G++K G D ++ + SE + Y I A C
Sbjct: 313 MEV-YGFVPDRFTYTTLFDGHLKCGNVDASITL---SEEAVRKGVQILDYTCSILLNALC 368
Query: 308 --GNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
GN + V K++ +N L + +++ + + A E+ E+ L +
Sbjct: 369 KEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHV 428
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
N L+ +C + +AE I K +G PNV T+ + GY
Sbjct: 429 TYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGY 472
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 142/351 (40%), Gaps = 58/351 (16%)
Query: 71 LDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA--IRLDL 128
+ + VE+G ++E +I + F QI M KK L P ++ ++
Sbjct: 450 IKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKG---LKPNVISYGCLINC 506
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K I +A + + +P+ +Y L++ A + A +M R +V
Sbjct: 507 LCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPT 566
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ YN ++N + G + ++L E+ KG+ D T++ L+
Sbjct: 567 LVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLI----------------- 609
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAV---LRKSEVLMMHNKFSRAYDFVITQ 303
SGY AG KAL + ++KS + N + R
Sbjct: 610 -------------------SGYSSAGNVQKALELYETMKKSGIKPTLNTYHRL------- 643
Query: 304 YAACGNKDDVLRVWKRYKQNLK---VYNRG-YICVISSLLKFDGMESAEKIFEEWESRNL 359
A CG K+ ++ V K Y++ L+ V +R Y +I ++ ++ A + E++ +
Sbjct: 644 IAGCG-KEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGI 702
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
D N LI + + G +HK + L+ ++RG P T+ ++ G+ +
Sbjct: 703 QPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCK 753
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS 230
E I Q+M LV + YN++++ Y + G+ +K SL ME +GI DK T++ L+
Sbjct: 655 VEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLIL 714
Query: 231 ACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH 290
+ +V M+ RG++ Y G+ K D A R+ M
Sbjct: 715 GHFKEGRMHKVKNLVNDMKI-RGLIPKTETYDILIVGHCKLKDFDGAYVWYRE----MFE 769
Query: 291 NKFS 294
N F+
Sbjct: 770 NGFT 773
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 106/267 (39%), Gaps = 12/267 (4%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
++ A +F+ + + +P++ Y L+N +AE + ++ +GL I YNS
Sbjct: 548 LKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNS 607
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG---IDKIVAMME 249
+++ Y GN +K L M++ GI T+ L++ C EG ++KI M
Sbjct: 608 LISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGK----EGLVLVEKIYQEM- 662
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN 309
+V D +Y YV+ G KA ++ E + Y+ +I + G
Sbjct: 663 LQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPD-KMTYNCLILGHFKEGR 721
Query: 310 KDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
V + K + L Y +I K + A + E + I ++
Sbjct: 722 MHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDN 781
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTE 395
LI G H A+ + + ++G +
Sbjct: 782 LITGLREEGRSHDADVICSEMNMKGKD 808
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 126/283 (44%), Gaps = 7/283 (2%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K +E A F+ + + P V Y LL+ Y ++ + +M RGLV
Sbjct: 91 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 150
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ + S+++ + GN ++ +L+ +M E+G+ ++ TF+ L+ G D ++A
Sbjct: 151 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID--GFCKKGFLDDALLA 208
Query: 247 MMEADR-GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
+ E + G+ Y +GY K G D A ++R+ E + Y +I+ Y
Sbjct: 209 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV-TYSTIISGYC 267
Query: 306 ACGNKDDVLRV-WKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
GN D ++ K K+ + Y +I L + + A ++FE + D
Sbjct: 268 KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 327
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
LID +C+ G + KA +L + +G P+V T+ ++ G
Sbjct: 328 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLING 370
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 117/269 (43%), Gaps = 11/269 (4%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ +++N A E A + +M GL + YN++++ Y + G + ++ EM
Sbjct: 84 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT 143
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
++G+ D TF+ L+ A A + E +VA M +RG+ ++ + G+ K G
Sbjct: 144 QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR-ERGLRMNEVTFTALIDGFCKKGFL 202
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKD---DVLRVW--KRYKQNLKVYNR 329
D AL + + + Y+ +I Y G D +++R KR K ++ Y+
Sbjct: 203 DDALLAVEEMRKCGIQPSVV-CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 261
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
+IS K ++SA ++ ++ + + D + LI C L+ A L
Sbjct: 262 ----IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 317
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
G +P+ T+ + G+ + EK +
Sbjct: 318 LQLGVQPDEFTYTTLIDGHCKEGNVEKAL 346
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 118/280 (42%), Gaps = 10/280 (3%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+VY L+ A E+A ++ MR G + YN+++ + + G + +
Sbjct: 8 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67
Query: 210 MHEMEEKG-IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ M E+G + TF+ +++ A EG K+ M G+ D Y T SGY
Sbjct: 68 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM-VREGLAPDVVSYNTLLSGY 126
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC--GNKDD-VLRVWKRYKQNLK 325
K G ++LAV + + F +A C GN + V V + ++ L+
Sbjct: 127 CKVGCLHESLAVFSE---MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLR 183
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+ + +I K ++ A EE + + N LI+ YC+ G + A L
Sbjct: 184 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 243
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
I + + + +P+V T+ + +GY + + + +K L
Sbjct: 244 IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKML 283
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 162/406 (39%), Gaps = 80/406 (19%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+ D+ V EG D+ ++ + +L + MT++ L P DV LI
Sbjct: 103 VFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG---LVP-DVVTFTSLI 158
Query: 130 ---AKVQGIEQAASYFNCVPEK-LKLPSV-YIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
K +EQA + + E+ L++ V + AL++ + + A + +++MR G+
Sbjct: 159 HATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQ 218
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAAS------- 236
+ YN+++N Y + G L+ EME K + D T+S ++S C +
Sbjct: 219 PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL 278
Query: 237 ------DGEGIDKIV------AMMEADR--------------GVVLDWTVYATAASGYVK 270
G D I + E R GV D Y T G+ K
Sbjct: 279 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCK 338
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSR--------AYDFVITQYAACGNKDDVLRV-WKRYK 321
G +KAL+ +H++ R Y +I + + R+ +K Y
Sbjct: 339 EGNVEKALS---------LHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYH 389
Query: 322 Q-----NLKVYNRGYICV-------ISSLLK---FDG-MESAEKIFEEWESRNLCHDIRI 365
+ N+K Y+ +C + +LLK G M+ A+K+++ RN D +
Sbjct: 390 EDPVPDNIK-YDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSV 448
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLR-GTEPNVRTWYLMATGYLQ 410
+ LI +CR G + KA + +K LR G PN + + G +
Sbjct: 449 YSILIHGHCRGGNVRKALSF-HKQMLRSGFSPNSTSTISLVRGLFE 493
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 134/290 (46%), Gaps = 19/290 (6%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P VYI L+NA + ++A+ ++ M G+ + Y+++M+ Y G + +
Sbjct: 218 PGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQI 277
Query: 210 MHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
H M + G++ + Y+++I+++ C E ++ + M+ + +V D Y + G
Sbjct: 278 FHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLH--KNMVPDTVTYNSLIDGL 335
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY--AACGNK--DDVLRVWKRYKQ-N 323
K+G AL ++ + MH++ A T A C N+ D ++ + K+
Sbjct: 336 CKSGRITSALNLMNE-----MHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG 390
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
++ Y +I L K +++A+++F+ + C D+ +I C+ G+ +A
Sbjct: 391 IQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEAL 450
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV----EAMKKALVLLE 429
+ K + G PN T+ ++ + ++++K E + K L++L+
Sbjct: 451 AIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLVLD 500
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 125/304 (41%), Gaps = 5/304 (1%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
L+ + K+ A + ++ P+V Y +++ K +A + +M RG+
Sbjct: 122 LNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGI 181
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
I Y +++ + G SL+ EM K I+ Y ++IL++A + +
Sbjct: 182 FPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKN 241
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ 303
++A+M + G+ Y+T GY G A + + V M N +Y+ +I
Sbjct: 242 LLAVMTKE-GIKPGVVTYSTLMDGYCLVGEVQNAKQIFH-AMVQMGVNPNVYSYNIMING 299
Query: 304 YAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
C D+ + + + +N+ Y +I L K + SA + E R D
Sbjct: 300 LCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPAD 359
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ L+DA C+ L KA L K + RG +P + T+ + G + + + E +
Sbjct: 360 VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQ 419
Query: 423 KALV 426
LV
Sbjct: 420 HLLV 423
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 103/235 (43%), Gaps = 13/235 (5%)
Query: 132 VQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
V ++ A F+ + + P+VY ++N K ++A ++++M + +V T+
Sbjct: 268 VGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVT 327
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA--M 247
YNS+++ ++G +LM+EM +G D T++ LL A + +DK A M
Sbjct: 328 YNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLD---ALCKNQNLDKATALFM 384
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC 307
+RG+ Y G K G A + + L++ + + + C
Sbjct: 385 KMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQH---LLVKGCCIDVWTYTVMISGLC 441
Query: 308 --GNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNL 359
G D+ L + + + N + N + +I SL + D + AEK+ E ++ L
Sbjct: 442 KEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 98 RFSHALQISMWMTKKSNFVLTPADVAI---RLDLIAKVQGIEQAASYFNCVPEKLKLPSV 154
R + AL + M + PADV LD + K Q +++A + F + E+ P++
Sbjct: 340 RITSALNLMNEMHHRGQ----PADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTM 395
Query: 155 YI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
Y AL++ + A+ + Q + +G Y M++ + G + + ++ +
Sbjct: 396 YTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSK 455
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTV 260
ME+ G + TF I++ + + + +K++ M A +VLD+ V
Sbjct: 456 MEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLVLDFKV 503
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 159/358 (44%), Gaps = 28/358 (7%)
Query: 82 DMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI---AKVQGIEQA 138
++E II Y+ S A + MT K ADV LI V +++A
Sbjct: 446 NVEMYSTIIDALCKYQLVSEAYGLFSEMTVKG----ISADVVTYSTLIYGFCIVGKLKEA 501
Query: 139 ASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNV 196
N + K P V Y L++A ++A+ ++ M + YN++MN
Sbjct: 502 IGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNG 561
Query: 197 YYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVV 255
Y KK + + M G+ D +T++IL++ C + E ++ M + + +V
Sbjct: 562 YLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQ--KNMV 619
Query: 256 LDWTVYATAASGYVKAG-------LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG 308
D Y++ G K+G L D+ + ++V+ Y+ +I G
Sbjct: 620 PDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVI--------TYNSLIDGLCKNG 671
Query: 309 NKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ D + ++ + K Q ++ + ++ L K ++ A+++F++ ++ D+ I N
Sbjct: 672 HLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYN 731
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
+I +C++GLL +A T++ K + G PN T+ ++ + ++++K + +++ +
Sbjct: 732 VMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMI 789
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 123/283 (43%), Gaps = 24/283 (8%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+++A FN + P V Y ++N + K +KA + ++M I +N
Sbjct: 254 VKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMI-LSRFPPIIQFNK 312
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEAD 251
+++ + + +Y SL H +E KGI D +T +IL++ C G + +++
Sbjct: 313 ILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILK-- 370
Query: 252 RG-----VVLDWTVYATAASGYVKAGL--SDKALAV-LRKSEVLMMHNKFSRAYDFVITQ 303
RG V L+ + G VK L DK LA + ++V +Y +I
Sbjct: 371 RGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQV---------SYATLING 421
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
G+ +++ ++ L N Y +I +L K+ + A +F E + + D
Sbjct: 422 VCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISAD 481
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
+ + LI +C G L +A L+ + L+ P+VRT+ ++
Sbjct: 482 VVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILV 524
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 130/279 (46%), Gaps = 13/279 (4%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V + L++++ +A+ ++++M RG+ TI YNS+++ + + ++ +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 210 MHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ M KG D D TF+IL++ C A +G++ M + RGV+ + Y T G+
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM--SLRGVIANTVTYNTLVQGF 448
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQNLK 325
++G L V +K M+ + +Y ++ G + L ++ + +++
Sbjct: 449 CQSG----KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Query: 326 VYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
+ G Y+ +I + ++ A +F + + D R N +I CR+ L KA+
Sbjct: 505 ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADI 564
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
L K G P+ T+ ++ +L ++ + E +++
Sbjct: 565 LFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEE 603
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 107/267 (40%), Gaps = 36/267 (13%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
L+N A +++ +M + G + Y ++NV ++G L+ +MEE+
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
I D +SI++ + + ME +G D Y T G+ AG D
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI-KGFKADIITYNTLIGGFCNAGRWDD 316
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVIS 336
+LR M+ K S V+T + +I
Sbjct: 317 GAKLLRD----MIKRKISPN---VVT----------------------------FSVLID 341
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
S +K + A+++ +E R + + N LID +C+ L +A ++ +G +P
Sbjct: 342 SFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP 401
Query: 397 NVRTWYLMATGYLQNNQSEKGVEAMKK 423
++ T+ ++ GY + N+ + G+E ++
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFRE 428
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 140/339 (41%), Gaps = 18/339 (5%)
Query: 136 EQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
+ A F + + LP+V + L +A A K E + +QM +G+ + M
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA----CAAASDGEGIDKIVAMME 249
+N + + S M ++ + G + D F+ LL+ C + E +D++V M
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN 309
+ L+ V +G V SD + + R E N+ + Y V+ G
Sbjct: 190 KPTLITLNTLVNGLCLNGKV----SDAVVLIDRMVETGFQPNEVT--YGPVLNVMCKSGQ 243
Query: 310 KDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
+ + ++ ++ N+K+ Y +I L K +++A +F E E + DI N
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLL 428
LI +C G L+ R PNV T+ ++ +++ + + + +K+ ++
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE---MM 360
Query: 429 EAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGK 467
+ G P+ + + + KE +E A + L+ K
Sbjct: 361 QRGI--APNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 66/154 (42%), Gaps = 3/154 (1%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D K +E+A + + K P + + L+N Y A + + ++M RG+
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ T+ YN+++ + Q+G + L EM + + D ++ ILL + E +
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALE 494
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
I +E + + LD +Y G A D A
Sbjct: 495 IFGKIEKSK-MELDIGIYMIIIHGMCNASKVDDA 527
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 127/283 (44%), Gaps = 5/283 (1%)
Query: 122 VAIRLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMR 179
V I +D + K Q +++A S F + K+ P + +L++ + A + ++M
Sbjct: 450 VNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKML 509
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
D + + Y S++ +++ G + + EM +G D + + A + E
Sbjct: 510 DSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVE 569
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
+ ++A +G+V D Y+ G VKAG S + + + + +H AY+
Sbjct: 570 KGRALFEEIKA-QGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDV-LAYNT 627
Query: 300 VITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
VI + G D ++ + K + L+ Y V+ L K D ++ A +FEE +S
Sbjct: 628 VIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIG 687
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+ ++ I + LID + + G + +A ++ + +G PN TW
Sbjct: 688 VDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTW 730
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 147/346 (42%), Gaps = 20/346 (5%)
Query: 72 DQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI--RLDLI 129
D E G ++ + I+I + ++ A I + + K V +P +D +
Sbjct: 436 DTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHK---VCSPDSRTFCSLIDGL 492
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSV--YIALL-NAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ ++ A S + + + ++P+V Y +L+ N + C + E I ++M RG
Sbjct: 493 GRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRK-EDGHKIYKEMVHRGCSPD 551
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ NS M+ ++ G +K +L E++ +G+ D ++SIL+ A K+
Sbjct: 552 LMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFY 611
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
M+ ++G+ LD Y T G+ K+G DKA +L + + + Y V+ A
Sbjct: 612 EMK-EQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVV-TYGSVVDGLAK 669
Query: 307 CGNKDDVLRVWKRYKQ-----NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
D+ +++ K N+ +Y+ +I K ++ A I EE + L
Sbjct: 670 IDRLDEAYMLFEEAKSIGVDLNVVIYSS----LIDGFGKVGRIDEAYLILEELMQKGLTP 725
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+ N L+DA + + +A+ + PN T+ +M G
Sbjct: 726 NSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMING 771
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 114/263 (43%), Gaps = 20/263 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++ L+ +A + A ++ +M+ + YN ++ + + G HEM
Sbjct: 240 LFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEM 299
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ +G+ D T++ L+ C A E ++ + ++ +R V + Y T GY AG
Sbjct: 300 KAQGLVPDDVTYTTLIGVLCKARRLDEAVE-LFEELDLNRSVPCVYA-YNTMIMGYGSAG 357
Query: 273 LSDKALAVL----RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ----NL 324
D+A ++L RK + + AY+ ++T G ++ LR+ +Q NL
Sbjct: 358 KFDEAYSLLERQKRKGCIPSV-----IAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNL 412
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
YN +I L K +E+A K+ + + L +I N +ID C+ L +A +
Sbjct: 413 TTYN----ILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACS 468
Query: 385 LIYKAQLRGTEPNVRTWYLMATG 407
+ + P+ RT+ + G
Sbjct: 469 IFLGLDHKVCSPDSRTFCSLIDG 491
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 108/253 (42%), Gaps = 4/253 (1%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y L+ A + A + + QM++ G + +++ V+ + G SL+ E
Sbjct: 204 SAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDE 263
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M+ D +++ + + K M+A +G+V D Y T KA
Sbjct: 264 MKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKA-QGLVPDDVTYTTLIGVLCKAR 322
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GY 331
D+A+ + + + L AY+ +I Y + G D+ + +R K+ + + Y
Sbjct: 323 RLDEAVELFEELD-LNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAY 381
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
C+++ L + +E A +I +E ++ ++ N LID C+ G L A + +
Sbjct: 382 NCILTCLGRKGKVEEALRIHDEMR-QDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKE 440
Query: 392 RGTEPNVRTWYLM 404
G PN+ T +M
Sbjct: 441 AGLFPNIMTVNIM 453
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 75/419 (17%), Positives = 151/419 (36%), Gaps = 83/419 (19%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D+ + LLD+ D+ + I F + A + M + L P DV
Sbjct: 255 DAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQG---LVPDDVTY 311
Query: 125 R--LDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRD 180
+ ++ K + +++A F + +P VY ++ Y A ++A ++++ +
Sbjct: 312 TTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKR 371
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
+G + I YN ++ + G ++ + EM + + T++IL+ A + E
Sbjct: 372 KGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAP-NLTTYNILIDMLCKAGELEA 430
Query: 241 -----------------------IDKIVAMMEADRGVVL-----------DWTVYATAAS 266
ID++ + D + D + +
Sbjct: 431 ALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLID 490
Query: 267 GYVKAGLSDKALAVLRKSEVLMMHNKFSRA--YDFVITQYAACGNKDDVLRVWKRY---- 320
G + G D A ++ K ++ ++ Y +I + CG K+D +++K
Sbjct: 491 GLGRRGRVDDAYSLYEK---MLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRG 547
Query: 321 --------------------------------KQNLKVYNRGYICVISSLLKFDGMESAE 348
Q L R Y +I L+K
Sbjct: 548 CSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETY 607
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
K+F E + + L D+ N +ID +C+ G + KA L+ + + +G +P V T+ + G
Sbjct: 608 KLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDG 666
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 77/408 (18%), Positives = 161/408 (39%), Gaps = 67/408 (16%)
Query: 22 VLDSSSSYSTATGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQW------- 74
+LDS + TS + + +K+Y+ + G D M LL+ +
Sbjct: 508 MLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLM--LLNSYMDCVFKA 565
Query: 75 --VEEGRPLDMEQLRI--IIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIA 130
VE+GR L E+++ ++ R Y H L + + + + + LD++A
Sbjct: 566 GEVEKGRAL-FEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLA 624
Query: 131 ---------KVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMR 179
K +++A + K P+V Y ++++ A ++A ++ ++ +
Sbjct: 625 YNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAK 684
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
G+ + Y+S+++ + + G + ++ E+ +KG+ + YT++ LL A A E
Sbjct: 685 SIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKA---E 741
Query: 240 GIDKIVAMMEADRGVVL--DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY 297
ID+ + + + + Y+ +G L M KF++A+
Sbjct: 742 EIDEAQVCFQNMKNLKCSPNAMTYSIMING-------------------LCMIRKFNKAF 782
Query: 298 DFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWES 356
F W+ KQ LK N Y +I+ L K + A +F+ +++
Sbjct: 783 VF-----------------WQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKA 825
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
D N +I+ A + + +L+G N +T ++
Sbjct: 826 SGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVL 873
>gi|110738160|dbj|BAF01011.1| DYW7 protein [Arabidopsis thaliana]
Length = 328
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 136/307 (44%), Gaps = 40/307 (13%)
Query: 134 GIEQAASYFNCVPEKLKLPS---VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
G +A + V KL + S V ++L YA + A ++MR+R I +
Sbjct: 24 GDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAW 79
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL------LSACAAASDGEGIDKI 244
NS++ Y Q G +++ L+ EME++GI T++IL L C AA D +
Sbjct: 80 NSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMD------L 133
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
+ ME G+ D + SG + G+ +AL + RK + + A +++
Sbjct: 134 MQKMET-FGITADVFTWTAMISGLIHNGMRYQALDMFRK---MFLAGVVPNAVT-IMSAV 188
Query: 305 AAC--------GNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWES 356
+AC G++ + V + ++ V N ++ K +E A K+F+ ++
Sbjct: 189 SACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS----LVDMYSKCGKLEDARKVFDSVKN 244
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ D+ N +I YC+ G KA L + Q PN+ TW M +GY++N +
Sbjct: 245 K----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGE 300
Query: 417 GVEAMKK 423
++ ++
Sbjct: 301 AMDLFQR 307
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 126/283 (44%), Gaps = 7/283 (2%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K +E A F+ + + P V Y LL+ Y ++ + +M RGLV
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ + S+++ + GN ++ +L+ +M E+G+ ++ TF+ L+ G D ++A
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID--GFCKKGFLDDALLA 350
Query: 247 MMEADR-GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
+ E + G+ Y +GY K G D A ++R+ E + Y +I+ Y
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV-TYSTIISGYC 409
Query: 306 ACGNKDDVLRV-WKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
GN D ++ K K+ + Y +I L + + A ++FE + D
Sbjct: 410 KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 469
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
LID +C+ G + KA +L + +G P+V T+ ++ G
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLING 512
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 117/269 (43%), Gaps = 11/269 (4%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ +++N A E A + +M GL + YN++++ Y + G + ++ EM
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT 285
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
++G+ D TF+ L+ A A + E +VA M +RG+ ++ + G+ K G
Sbjct: 286 QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR-ERGLRMNEVTFTALIDGFCKKGFL 344
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKD---DVLRVW--KRYKQNLKVYNR 329
D AL + + + Y+ +I Y G D +++R KR K ++ Y+
Sbjct: 345 DDALLAVEEMRKCGIQPSVV-CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
+IS K ++SA ++ ++ + + D + LI C L+ A L
Sbjct: 404 ----IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 459
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
G +P+ T+ + G+ + EK +
Sbjct: 460 LQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 118/280 (42%), Gaps = 10/280 (3%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+VY L+ A E+A ++ MR G + YN+++ + + G + +
Sbjct: 150 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 209
Query: 210 MHEMEEKG-IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ M E+G + TF+ +++ A EG K+ M G+ D Y T SGY
Sbjct: 210 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM-VREGLAPDVVSYNTLLSGY 268
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC--GNKDD-VLRVWKRYKQNLK 325
K G ++LAV + + F +A C GN + V V + ++ L+
Sbjct: 269 CKVGCLHESLAVFSE---MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLR 325
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+ + +I K ++ A EE + + N LI+ YC+ G + A L
Sbjct: 326 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 385
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
I + + + +P+V T+ + +GY + + + +K L
Sbjct: 386 IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKML 425
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 162/406 (39%), Gaps = 80/406 (19%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+ D+ V EG D+ ++ + +L + MT++ L P DV LI
Sbjct: 245 VFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG---LVP-DVVTFTSLI 300
Query: 130 ---AKVQGIEQAASYFNCVPEK-LKLPSV-YIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
K +EQA + + E+ L++ V + AL++ + + A + +++MR G+
Sbjct: 301 HATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQ 360
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAAS------- 236
+ YN+++N Y + G L+ EME K + D T+S ++S C +
Sbjct: 361 PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL 420
Query: 237 ------DGEGIDKIV------AMMEADR--------------GVVLDWTVYATAASGYVK 270
G D I + E R GV D Y T G+ K
Sbjct: 421 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCK 480
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSR--------AYDFVITQYAACGNKDDVLRV-WKRYK 321
G +KAL+ +H++ R Y +I + + R+ +K Y
Sbjct: 481 EGNVEKALS---------LHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYH 531
Query: 322 Q-----NLKVYNRGYICV-------ISSLLK---FDG-MESAEKIFEEWESRNLCHDIRI 365
+ N+K Y+ +C + +LLK G M+ A+K+++ RN D +
Sbjct: 532 EDPVPDNIK-YDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSV 590
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLR-GTEPNVRTWYLMATGYLQ 410
+ LI +CR G + KA + +K LR G PN + + G +
Sbjct: 591 YSILIHGHCRGGNVRKALSF-HKQMLRSGFSPNSTSTISLVRGLFE 635
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 159/367 (43%), Gaps = 11/367 (2%)
Query: 41 TISLRKGSSMYKLYRMLSPMG--DPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKR 98
++++ KG Y + +++ + P S+ LD + + L + ++ K+F
Sbjct: 57 SVTVEKGKYSYDVETLINRLTALPPRGSIARCLDPFKNK---LSLNDFALVFKEFAQRGD 113
Query: 99 FSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVY--I 156
+ +L++ +M ++ I + L+ + +++ F+ +P + +VY
Sbjct: 114 WQRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYT 173
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEE 215
A++NAY + ++ M+ + + YN+++N + G +++ L L EM
Sbjct: 174 AIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRH 233
Query: 216 KGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
+GI D T++ LL ACA G+ + + M + G+V D Y+ + K +
Sbjct: 234 EGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMN-ESGIVPDINTYSYLVQTFGKLNRLE 292
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVI 335
K +LR+ E + +Y+ ++ YA G+ + + V+++ + V N V+
Sbjct: 293 KVSELLREMECGGNLPDIT-SYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVL 351
Query: 336 SSLLKFDG-MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
+L G + +F E + N D N LI + G + TL +
Sbjct: 352 LNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENV 411
Query: 395 EPNVRTW 401
EPN++T+
Sbjct: 412 EPNMQTY 418
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 125/307 (40%), Gaps = 52/307 (16%)
Query: 151 LPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY----- 203
LP + Y LL AYA S ++A + +QM+ G V Y+ ++N+Y + G Y
Sbjct: 307 LPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRD 366
Query: 204 ------------------------------KKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
K++ +L H+M E+ ++ + T+ L+ AC
Sbjct: 367 LFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACG 426
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNK 292
E KI+ M ++GVV Y + +A L ++AL + +EV N
Sbjct: 427 KGGLYEDAKKILLHMN-EKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEV--GSNP 483
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIF 351
Y+ +I +A G + + R ++ LK + VI + + E A K +
Sbjct: 484 TVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSY 543
Query: 352 EEWESRNLCHDIRIPNHL-----IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
E E N C PN L + YC GL+ + E + + G P+V + +M
Sbjct: 544 VEMEKAN-CE----PNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYCMMLA 598
Query: 407 GYLQNNQ 413
Y +N++
Sbjct: 599 LYAKNDR 605
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 131/331 (39%), Gaps = 43/331 (12%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y LL A A ++AE++ + M + G+V Y+ ++ + + +K+ L+ EM
Sbjct: 242 TYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREM 301
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E G D ++++LL A A + + M+A G V + Y+ + Y K G
Sbjct: 302 ECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQA-AGCVANAATYSVLLNLYGKHGR 360
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVY- 327
D + + +V + + Y+ +I + G +V+ ++ + + N++ Y
Sbjct: 361 YDDVRDLFLEMKV-SNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYE 419
Query: 328 ------------------------------NRGYICVISSLLKFDGMESAEKIFEEWESR 357
++ Y VI + + E A +F
Sbjct: 420 GLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEV 479
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ N LI A+ R GL +AE ++ + G + +V ++ + + Q Q E+
Sbjct: 480 GSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEA 539
Query: 418 VEAMKKALVLLEAGTRWKPSKECLAACLGYY 448
V K+ V +E +P++ L A L Y
Sbjct: 540 V----KSYVEMEKAN-CEPNELTLEAVLSIY 565
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 154/353 (43%), Gaps = 16/353 (4%)
Query: 76 EEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA---IRLDLIAKV 132
E+G D+ II + + AL++ MT+K + P DVA I +D + +
Sbjct: 3 EKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKG---VNP-DVATYTIIVDRLCRA 58
Query: 133 QGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
+++A F+ + E+ + Y AL+N ++ E+A ++++M +G I Y
Sbjct: 59 GKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITY 118
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC---AAASDGEGIDKIVAM 247
N++++ + G + M +G D ++ LL A ++ G+ K + M
Sbjct: 119 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM 178
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC 307
ADR V D Y T G+ + +D+A+ L K + + + Y+ ++ A
Sbjct: 179 --ADRKVAPDLITYNTLIDGFCRVEKTDEAMK-LFKDVIAKGYMPDTVTYNSILLGLARK 235
Query: 308 GNKDDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
N D+ ++K+ + N Y V+S + M +++EE + D+ +
Sbjct: 236 SNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLC 295
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
N +ID C+ + A ++ + G P+V T+ ++ G + N +K E
Sbjct: 296 NAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHE 348
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 100/247 (40%), Gaps = 41/247 (16%)
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
M ++G + Y+++++ +TG + ++ EM EKG++ D T++I++ A
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY 297
+ D++ M +RG + Y +G K RAY
Sbjct: 61 VDEADELFHKM-IERGCSANTVAYNALINGLCK-------------------DENIERAY 100
Query: 298 DFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
+ + A+ G + D N Y ++S L + + A++ F+ SR
Sbjct: 101 KL-LEEMASKGYEPD---------------NITYNTILSGLCRMGKVSEAKQFFDSMPSR 144
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL--RGTEPNVRTWYLMATGYLQNNQSE 415
D+ N L+DA + G + +A L + R P++ T+ + G+ + E
Sbjct: 145 GYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFC---RVE 201
Query: 416 KGVEAMK 422
K EAMK
Sbjct: 202 KTDEAMK 208
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 13/135 (9%)
Query: 97 KRFSHALQISMWMTKKSNFVLTPADV---AIRLDLIAKVQGIEQAASYFNCV--PEKLKL 151
KR A+++ +M +K T ADV I L + + + QA +F + +
Sbjct: 446 KRTDEAVRLFQYMVEKG----TVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFS 501
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P V Y L+NA A ++A QQM G + YN++MN + G + + D L
Sbjct: 502 PDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRL 561
Query: 210 MHEMEEKGI--DCDK 222
M+EKG DC K
Sbjct: 562 TQAMKEKGFLSDCFK 576
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 128/292 (43%), Gaps = 11/292 (3%)
Query: 136 EQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
E+A FN + + P+V + L++ +A+ +++ M RG+V + YNS+
Sbjct: 286 EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSL 345
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADR 252
+ + G+ L M KG + D +++L++ C + E + M++
Sbjct: 346 IEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQV-- 403
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKD- 311
G D Y +G + G A + V+ ++ Y + I C N
Sbjct: 404 GKRPDVKTYGALLTGLFQGGKVGDAKKLFG---VMKVYGIPGDLYIYGIFLNGLCKNGCL 460
Query: 312 -DVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
+ + ++ + K N+K+ + C+I L K +E+A ++FE+ L D+ N +
Sbjct: 461 FEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIM 520
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
I +CR G + KA L K + G P+ T+ + G+ ++ + EK VE +
Sbjct: 521 IHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELL 572
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 51/275 (18%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +++A + ++A + ++M+ +G+ I Y S+M +++ L +EM
Sbjct: 245 YSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMV 296
Query: 215 EKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+G+ + TF++L+ C E D + M++ RG+V + Y + G+ G
Sbjct: 297 NQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQ--RGIVPNLLTYNSLIEGFCLVGD 354
Query: 274 SDKALAVLRKSEVLMMHNKFSR----AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN- 328
+ A + + M +K Y +I Y ++ ++++ Q K +
Sbjct: 355 LNSA-----RELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDV 409
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+ Y +++ L + + A+K+F + + D+ I ++ C+ G L +A L K
Sbjct: 410 KTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNK 469
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ + ++ + + G + + E E +K
Sbjct: 470 LKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEK 504
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K +E A F +P++ P V Y +++ + KA I+ Q+M G
Sbjct: 486 IDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGC 545
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCD 221
I Y +++ ++++ +K+ L+H M ++ + D
Sbjct: 546 TPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 583
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 124/295 (42%), Gaps = 36/295 (12%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y L+N Y A + A + +MR + + +++N + + G +K + + +
Sbjct: 204 ATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQ 263
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
++E G++ D Y ++ L+ A + A G +I ++M+ G D Y Y +AG
Sbjct: 264 LQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQ-HMGCEPDRASYNIMVDAYGRAG 322
Query: 273 LSDKALAVLR-----------KSEVLMMHNKFSRA-----YDFVITQYAACGNKDDVLRV 316
L + A AV KS +L++ + +SRA + ++ Q G K D +
Sbjct: 323 LHEDAQAVFEVMKRLGITPTMKSHMLLL-SAYSRAGKVAKCEEIVNQMHKSGIKPDTFVL 381
Query: 317 WKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRR 376
L +Y R L +F+ ME ++ E DI N LI+ Y R
Sbjct: 382 ----NSMLNLYGR--------LGQFEKME---EVLTAMEKGPYPADISTYNILINIYGRA 426
Query: 377 GLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAG 431
G + E L R P+V TW Y + Q + +E ++ +++AG
Sbjct: 427 GFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEE---MIDAG 478
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 110/270 (40%), Gaps = 21/270 (7%)
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
I YN +++ Y Q YKK +S E+ E + T+++LL A + E + + A
Sbjct: 98 VICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFA 157
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
M G VY G +K G + KA+ + + + + Y +I Y
Sbjct: 158 EMR-KYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPS-TATYTMLINLYGK 215
Query: 307 CGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKF---DGM-ESAEKIFEEWESRNLCHD 362
L+V+ + N IC ++L+ +G+ E AE+IFE+ + L D
Sbjct: 216 ASKSYMALKVFHEMRSQKCKPN---ICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPD 272
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG----- 417
+ N L++AY R G + A + Q G EP+ ++ +M Y + E
Sbjct: 273 VYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFE 332
Query: 418 -------VEAMKKALVLLEAGTRWKPSKEC 440
MK ++LL A +R +C
Sbjct: 333 VMKRLGITPTMKSHMLLLSAYSRAGKVAKC 362
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/347 (19%), Positives = 141/347 (40%), Gaps = 17/347 (4%)
Query: 92 KFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYF------NCV 145
+ RL K++ + I W+ +S+F + +D + ++A S + CV
Sbjct: 71 QLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCV 130
Query: 146 PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
P + Y LL AY + EKAE + +MR G + YN+ ++ + G+ +K
Sbjct: 131 PTE----DTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQK 186
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAA 265
+ M+ T+++L++ AS K+ M + + + +
Sbjct: 187 AVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQK-CKPNICTFTALV 245
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK 325
+ + + GL +KA + + + + AY+ ++ Y+ G ++ +
Sbjct: 246 NAFAREGLCEKAEEIFEQLQEAGLEPDV-YAYNALMEAYSRAGFPYGAAEIFSLMQHMGC 304
Query: 326 VYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
+R Y ++ + + E A+ +FE + + ++ L+ AY R G + K E
Sbjct: 305 EPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEE 364
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAG 431
++ + G +P+ M Y + Q EK M++ L +E G
Sbjct: 365 IVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEK----MEEVLTAMEKG 407
>gi|30686506|ref|NP_173402.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75263158|sp|Q9FXH1.1|PPR52_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g19720; AltName: Full=Protein DYW7
gi|10086495|gb|AAG12555.1|AC007797_15 Unknown Protein [Arabidopsis thaliana]
gi|332191770|gb|AEE29891.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 894
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 137/307 (44%), Gaps = 40/307 (13%)
Query: 134 GIEQAASYFNCVPEKLKLPS---VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
G +A + V KL + S V ++L YA + A ++MR+R + I +
Sbjct: 195 GDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDV----IAW 250
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL------LSACAAASDGEGIDKI 244
NS++ Y Q G +++ L+ EME++GI T++IL L C AA D +
Sbjct: 251 NSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMD------L 304
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
+ ME G+ D + SG + G+ +AL + RK + + A +++
Sbjct: 305 MQKMET-FGITADVFTWTAMISGLIHNGMRYQALDMFRK---MFLAGVVPNAVT-IMSAV 359
Query: 305 AAC--------GNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWES 356
+AC G++ + V + ++ V N ++ K +E A K+F+ ++
Sbjct: 360 SACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS----LVDMYSKCGKLEDARKVFDSVKN 415
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ D+ N +I YC+ G KA L + Q PN+ TW M +GY++N +
Sbjct: 416 K----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGE 471
Query: 417 GVEAMKK 423
++ ++
Sbjct: 472 AMDLFQR 478
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 129/313 (41%), Gaps = 26/313 (8%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
+L++ Y+ E A + +++ K +NSM+ Y Q G K L M++
Sbjct: 392 SLVDMYSKCGKLEDARKVFDSVKN----KDVYTWNSMITGYCQAGYCGKAYELFTRMQDA 447
Query: 217 GIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
+ + T++ ++S D GE +D + ME D V + + +GY++ G D
Sbjct: 448 NLRPNIITWNTMISGYIKNGDEGEAMD-LFQRMEKDGKVQRNTATWNLIIAGYIQNGKKD 506
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY----KQNLKVYNRGY 331
+AL + RK M ++F +++ AC N V + + ++NL +
Sbjct: 507 EALELFRK----MQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVK 562
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+ + K +E + IF E++ DI N LI Y G A L + +
Sbjct: 563 NALTDTYAKSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKT 618
Query: 392 RGTEPNVRTW--YLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYK 449
+G PN T ++A G + N V+ KK + P+ E +A + Y
Sbjct: 619 QGITPNRGTLSSIILAHGLMGN------VDEGKKVFYSIANDYHIIPALEHCSAMVYLYG 672
Query: 450 KERDIEGADYFIK 462
+ +E A FI+
Sbjct: 673 RANRLEEALQFIQ 685
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 109/258 (42%), Gaps = 9/258 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y L+N Y E A QM+ R + I YN+++N + L+ EM
Sbjct: 377 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 436
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
++ G++ TF+ L+ A E +++ M+ + G+ + Y + + + K G
Sbjct: 437 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ-ENGLKPNVVSYGSIVNAFCKNGK 495
Query: 274 SDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNR 329
+A+A+L M H ++ Y+ +I Y G D + ++ K N +
Sbjct: 496 IPEAVAILDD----MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIV 551
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +I L + AE+I + L D N LI A C RG + KA L +
Sbjct: 552 TYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM 611
Query: 390 QLRGTEPNVRTWYLMATG 407
G + VRT++ + +G
Sbjct: 612 HKYGIKSTVRTYHQLISG 629
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 123/284 (43%), Gaps = 5/284 (1%)
Query: 138 AASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMN 195
A F+ + E+ LP+ Y +++ + E + QM GL I YN +++
Sbjct: 219 AVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLS 278
Query: 196 VYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVV 255
+ G + +L+ EM + + D +T+SIL + D + + + + +
Sbjct: 279 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTI 338
Query: 256 LDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLR 315
D+T + +G K G A VL +S V Y+ +I Y G +
Sbjct: 339 GDYTC-SILLNGLCKDGKVSIAEEVL-QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFS 396
Query: 316 VWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
+ + K +++K + Y +I+ L K + + +A+ + E + + + N LIDAY
Sbjct: 397 TFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYG 456
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
R G L K ++ + Q G +PNV ++ + + +N + + V
Sbjct: 457 RTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 500
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 119/259 (45%), Gaps = 7/259 (2%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S + L+N +KA ++++M + G V + YN+++N Y + G YK L+ +
Sbjct: 169 STFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQ 228
Query: 213 MEEKGIDCDKYTFSILL-SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
M KGI+ D T+++L+ C +G + M + R + + Y + +G+VK
Sbjct: 229 MGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRK--RMISPNEITYNSIINGFVKE 286
Query: 272 GLSDKALAVLRKSEVL-MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR- 329
G A + ++ +L ++ N + Y+ +I + GN + L + + + N
Sbjct: 287 GKIGAATRIFQEMSMLNLLPNCVT--YNALIDGHCHDGNFEQALTILEMMEATGPKPNEV 344
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +++ L + E ++ I E + +ID CR GLL+++ L+ K
Sbjct: 345 SYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKM 404
Query: 390 QLRGTEPNVRTWYLMATGY 408
G P+V T+ ++ G+
Sbjct: 405 LKDGVVPDVVTFSVLINGF 423
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 119/281 (42%), Gaps = 12/281 (4%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +++N + A I Q+M L+ + YN++++ + GN+++ +++ ME
Sbjct: 276 YNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMME 335
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
G ++ ++S LL+ + E I+ M + G+++ Y G + GL
Sbjct: 336 ATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMN-GMIVGCIAYTAMIDGLCRNGLL 394
Query: 275 DKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRV-WKRYKQNLKVYNRG 330
++++ +L K M+ + + +I + G +V + K YK L +
Sbjct: 395 NESVKLLDK----MLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSII 450
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I + K + A K++ + I N L+ + C+ G + AE +
Sbjct: 451 YTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMS 510
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAG 431
G PN T+ + GY S G++A +++AG
Sbjct: 511 KIGNVPNSITFDCIINGY---GNSGNGLKAFSMFDEMIKAG 548
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 104/257 (40%), Gaps = 21/257 (8%)
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS 230
AE M G V +I ++ ++N Y +GN K S+ EM + G +T+ LL
Sbjct: 502 AEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLK 561
Query: 231 A-CAAASDGEG---IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV 286
A C A E +DK+ + A +D Y T K+G+ A+A+ +
Sbjct: 562 ALCRAGKFKEAKRLLDKLHYIPSA-----VDTVTYNTILVETFKSGMLTDAVALFDE--- 613
Query: 287 LMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-----KQNLKVYNRGYICVISSLLKF 341
++ N +Y + I +A + ++ Y K + Y + L +
Sbjct: 614 MVQRNVLPDSYTYAII-FAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRA 672
Query: 342 DGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG--TEPNVR 399
++A E+ E LC D+ N +++ Y R G + KA I+ G P++
Sbjct: 673 GQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGD-IFTMMWSGITISPSLA 731
Query: 400 TWYLMATGYLQNNQSEK 416
T+ ++ GY + K
Sbjct: 732 TYNILLHGYAKKKNLSK 748
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 98/267 (36%), Gaps = 40/267 (14%)
Query: 152 PSVYIA--LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PSVY LL + + ++M R + +N ++NV G KK L
Sbjct: 131 PSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYL 190
Query: 210 MHEMEEKGIDCDKYTFSILLS-ACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ +MEE G T++ +L+ C ++ I M +G+ D Y
Sbjct: 191 LKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQM--GSKGIEADACTYNMLVDDL 248
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
K S K +L+K M+ N YN
Sbjct: 249 CKNNRSAKGYLLLKKMRKRMI-------------------------------SPNEITYN 277
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+I+ +K + +A +IF+E NL + N LID +C G +A T++
Sbjct: 278 S----IINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEM 333
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSE 415
+ G +PN ++ + G ++ + E
Sbjct: 334 MEATGPKPNEVSYSALLNGLCRHAKFE 360
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 16/139 (11%)
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-YIC--VISSLLKFDGMESAEKIFE 352
+D +I Y G D L ++ ++ +N Y C ++ L+K + + F+
Sbjct: 100 VFDLLIRVYLREGMVGDALETFRL--MGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFK 157
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT------WYLMAT 406
E +R +C D+ N LI+ C G L KA L+ K + G P+V T WY
Sbjct: 158 EMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKG 217
Query: 407 GY-----LQNNQSEKGVEA 420
Y L + KG+EA
Sbjct: 218 RYKAALELIDQMGSKGIEA 236
>gi|359496222|ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g13150-like [Vitis vinifera]
Length = 379
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 127/304 (41%), Gaps = 11/304 (3%)
Query: 163 ACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDK 222
A AK E I++ + + + +M +Y + G ++ L E+ + ++C++
Sbjct: 68 AKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAHKLFDELPK--LNCER 125
Query: 223 --YTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV 280
+F+ LLS C + + ID + + GVV D Y + + + G D AL+V
Sbjct: 126 TVVSFNALLSVCVNSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDSALSV 185
Query: 281 LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLL 339
L + E + + ++ ++ + G+ D ++W K+N N R Y + ++
Sbjct: 186 LDEMEKVGLEPDLI-TFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVI 244
Query: 340 KFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVR 399
+ M A ++ +E ++ + D+ N L+ +C G L +A+ Y R P VR
Sbjct: 245 SENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRW-YSEIARNELPPVR 303
Query: 400 TWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADY 459
Y+ +L EKG M L RW L L KE IE A
Sbjct: 304 ATYMTLIPFL----VEKGDFDMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATE 359
Query: 460 FIKL 463
++L
Sbjct: 360 LVEL 363
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 114/261 (43%), Gaps = 22/261 (8%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-C 232
+ +QM D G+ I+YN +++ Y + G + + L EM G++ YT++ LL+A C
Sbjct: 30 LFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFC 89
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
E ++ M A++G D Y+T SG K G +AL +L H
Sbjct: 90 KETKMKEAMELFKTM--AEKGFEPDVVTYSTIISGLCKTGKVTEALEML-------FHKM 140
Query: 293 FSRAYDFVITQYAACGN---KDDVLRVWKRYKQNLKVYNRGYI-------CVISSLLKFD 342
R Y A N KD+ + + YK ++ ++GY+ ++S L +
Sbjct: 141 IERGCSANTVAYNALINGLCKDE--NIERAYKLLEEMASKGYVPDNITYNTILSGLCRMG 198
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
+ A++ F+ SR D+ N L+DA + G +A L +G P+ T+
Sbjct: 199 KVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYN 258
Query: 403 LMATGYLQNNQSEKGVEAMKK 423
+ G + + ++ E KK
Sbjct: 259 SILLGLARKSNMDEAEEMFKK 279
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 143/351 (40%), Gaps = 13/351 (3%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
L +Q ++ G D + I+I + R A ++ M L P+ L+
Sbjct: 30 LFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVG---LEPSIYTYNSLLN 86
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYA-CAKSAEKAEIIMQQMRDRGLV 184
K +++A F + EK P V Y +++ K E E++ +M +RG
Sbjct: 87 AFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCS 146
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDK 243
T+ YN+++N + N ++ L+ EM KG D T++ +LS C E
Sbjct: 147 ANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQF 206
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ 303
+M RG D Y K G +D+A+ + K + + + Y+ ++
Sbjct: 207 FDSM--PSRGYSPDVVAYNGLLDALYKEGKTDEAMKLF-KDVIAKGYMPDTVTYNSILLG 263
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
A N D+ ++K+ + N Y V+S + ++ A K+ EE D
Sbjct: 264 LARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPD 323
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
+ N L+D C+ L+ KA L G P++ ++ ++ G + N+
Sbjct: 324 VVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNK 374
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 123/284 (43%), Gaps = 30/284 (10%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK-LDS 208
PS+Y +LLNA+ ++A + + M ++G + Y+++++ +TG + L+
Sbjct: 76 PSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEM 135
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
L H+M E+G + ++ L++ + E K++ M A +G V D Y T SG
Sbjct: 136 LFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEM-ASKGYVPDNITYNTILSGL 194
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKF-SRAYDFVITQYAAC-------GNKDDVLRVWKR- 319
+ G + SE + SR Y + Y G D+ ++++K
Sbjct: 195 CRMG---------KVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245
Query: 320 ----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
Y + YN ++ L + M+ AE++F++ + + + ++ +CR
Sbjct: 246 IAKGYMPDTVTYNS----ILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+ A ++ + G P+V T+ ++ G + N +K E
Sbjct: 302 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHE 345
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRD 180
++ L+ + K + A F+ + E+ +P V + L++ A ++A+ ++ QM
Sbjct: 363 SVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTC 422
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGI--DCDK 222
G + YN++MN + G + + D L M+EKG DC K
Sbjct: 423 SGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCFK 466
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 121/272 (44%), Gaps = 15/272 (5%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+NAY +A ++ M +GL YN+++N + G+Y++ ++ EM
Sbjct: 262 YNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEML 321
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
G+ + TF+ +L D +++ M RGVV D +++ + + G
Sbjct: 322 GVGLCPNAATFNPMLVESCRKEDVWEAERVFNEM-LQRGVVPDLISFSSIVGVFSRNGEL 380
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG---- 330
+ALA K + + + + Y +I Y C N D V K ++ RG
Sbjct: 381 GRALAYFEKMKGVGLVPD-TVIYTILINGY--CRNDD----VSGALKMRNEMVERGCVMD 433
Query: 331 ---YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y +++ L + ++ A+++F+E R + D LI YC+ G + KA +L
Sbjct: 434 VVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFE 493
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
LR +P+V T+ + G+ + + EK E
Sbjct: 494 TMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKE 525
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 134/336 (39%), Gaps = 58/336 (17%)
Query: 137 QAASYFNCVPEKLK----LPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
+A +YF EK+K +P +Y L+N Y A + +M +RG V + Y
Sbjct: 382 RALAYF----EKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTY 437
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA 250
N+++N + D L EM E+G+ D YT + L+ DG + K +++ E
Sbjct: 438 NTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHG--YCKDGN-MTKALSLFET 494
Query: 251 D--RGVVLDWTVYATAASGYVKAGLSDKALAV---LRKSEVLMMHNKFSRAYDFVITQYA 305
R + D Y T G+ K G +KA + + E+ + FS +I +
Sbjct: 495 MTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFS----ILINGFC 550
Query: 306 ACGNKDDVLRVWKRYKQN------------LKVYNRG----------------------- 330
+ G + R+W K+ +K Y R
Sbjct: 551 SLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCI 610
Query: 331 -YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +I+S +K + + A + E R L ++ N ++ + R G + +AE +++K
Sbjct: 611 TYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKM 670
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
+G P+ T+ + GY+ + ++ + L
Sbjct: 671 IDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEML 706
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 112/244 (45%), Gaps = 7/244 (2%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+AE + +M RG+V I ++S++ V+ + G + + +M+ G+ D ++IL+
Sbjct: 347 EAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILI 406
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
+ D G K+ M +RG V+D Y T +G + + D A + ++ ++
Sbjct: 407 NGYCRNDDVSGALKMRNEM-VERGCVMDVVTYNTLLNGLCRGKMLDDADELFKE---MVE 462
Query: 290 HNKFSRAYDFVITQYAAC--GNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMES 346
F Y + C GN L +++ ++LK Y ++ K ME
Sbjct: 463 RGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEK 522
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
A++++ + SR + + LI+ +C GL+ +A L + + +G +P + T +
Sbjct: 523 AKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIK 582
Query: 407 GYLQ 410
GYL+
Sbjct: 583 GYLR 586
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 113/312 (36%), Gaps = 45/312 (14%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
ALL A + A + + G + N M+N + G + + EMEEK
Sbjct: 194 ALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEK 253
Query: 217 GIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
G+ D T++ L++A C E + M A +G+ Y +G K G +
Sbjct: 254 GVYADLVTYNTLVNAYCRRGLVSEAFGLVDCM--AGKGLKPGLFTYNALINGLCKEGSYE 311
Query: 276 KALAVL-----------------------RKSEVLMMHNKFSR-----------AYDFVI 301
+A VL RK +V F+ ++ ++
Sbjct: 312 RAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIV 371
Query: 302 TQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
++ G L +++ K L Y +I+ + D + A K+ E R
Sbjct: 372 GVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCV 431
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
D+ N L++ CR +L A+ L + RG P+ T + GY ++
Sbjct: 432 MDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGN------- 484
Query: 421 MKKALVLLEAGT 432
M KAL L E T
Sbjct: 485 MTKALSLFETMT 496
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
K + ++A N + E+ LP++ Y A+L ++ ++AE+++ +M D+G+
Sbjct: 619 FVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPD 678
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCD 221
Y S++N Y N K+ + EM ++G D
Sbjct: 679 KSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 113/267 (42%), Gaps = 13/267 (4%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP ++ +Y L+N Y E A QM+ R + I YN+++N +
Sbjct: 368 VPTRV----IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERIT 423
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
L+ EM++ G++ TF+ L+ A E +++ M+ + G+ + Y +
Sbjct: 424 NAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ-ENGLKPNVVSYGSI 482
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYK 321
+ + K G +A+A+L M H ++ Y+ +I Y G D + ++ K
Sbjct: 483 VNAFCKNGKIPEAVAILDD----MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK 538
Query: 322 QN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
N + Y +I L + AE+I + L D N LI A C RG +
Sbjct: 539 SNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNID 598
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATG 407
KA L + G + VRT++ + +G
Sbjct: 599 KALDLQQRMHKYGIKSTVRTYHQLISG 625
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 123/284 (43%), Gaps = 5/284 (1%)
Query: 138 AASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMN 195
A F+ + E+ LP+ Y +++ + E + QM GL I YN +++
Sbjct: 215 AVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLS 274
Query: 196 VYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVV 255
+ G + +L+ EM + + D +T+SIL + D + + + + +
Sbjct: 275 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTI 334
Query: 256 LDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLR 315
D+T + +G K G A VL +S V Y+ +I Y G +
Sbjct: 335 GDYTC-SILLNGLCKDGKVSIAEEVL-QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFS 392
Query: 316 VWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
+ + K +++K + Y +I+ L K + + +A+ + E + + + N LIDAY
Sbjct: 393 TFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYG 452
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
R G L K ++ + Q G +PNV ++ + + +N + + V
Sbjct: 453 RTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 496
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 144/323 (44%), Gaps = 19/323 (5%)
Query: 122 VAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIM--QQMR 179
VA+ + ++ K + AAS N + + VY AC + E +M ++M
Sbjct: 1 VAVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKME 60
Query: 180 DRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG 238
+ G I YN ++NVY + G + K+ L M+ G+ D+YT++ L++ C S
Sbjct: 61 EEGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLH 120
Query: 239 EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA-- 296
E + M++ G V D Y Y K+ + +A+ VLR+ EV N S +
Sbjct: 121 EEAAAVFKDMKS-MGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEV----NGCSPSIV 175
Query: 297 -YDFVITQYAACGNKDDVLRVWKRYKQ---NLKVYNRGYICVISSLLKFDGMESAEKIFE 352
Y+ +I+ YA G + + + + + NL V+ Y ++S ++ ESA ++F
Sbjct: 176 TYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFT--YTTLLSGFVRAGKDESAMRVFA 233
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
E + +I N LI + RG + + + + P++ TW + + QN
Sbjct: 234 EMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNG 293
Query: 413 QSEK--GV-EAMKKALVLLEAGT 432
+ GV + MK+A + E T
Sbjct: 294 MDSEVSGVFKEMKRAGFVPERDT 316
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 88/190 (46%), Gaps = 5/190 (2%)
Query: 104 QISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNA 161
+++ K+ F + + L + + Q + N + E PS+ Y +L+
Sbjct: 439 EVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYM 498
Query: 162 YACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCD 221
++ +++ E++E +++++ +G+ TI YN+++ Y + G K+ + EM E G+ D
Sbjct: 499 HSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPD 558
Query: 222 KYTFSILLSACAAASDGE-GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV 280
T++ +++ AA S E ID + M++ G + Y + GY K D A+
Sbjct: 559 VITYNTFVASYAADSMFEDAIDVVRYMIK--HGCKPNQNTYNSVVDGYCKHNHRDDAIMF 616
Query: 281 LRKSEVLMMH 290
+ L H
Sbjct: 617 ISSLHELDPH 626
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 153/346 (44%), Gaps = 32/346 (9%)
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
++V G+ + VPE+ Y L++AY+ S ++A I ++M + G+
Sbjct: 296 SEVSGVFKEMKRAGFVPER----DTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLST 351
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
YN+++ + G +++ + + EM++ ++ T+ LL A A +G+ I +++A+ E
Sbjct: 352 YNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYA---NGKEIGRMLALAE 408
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK---FSRAYDFVITQYAA 306
V++ +A V L + +L ++EV + K FS + +
Sbjct: 409 EICSGVIE--PHAVLLKTLV---LVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSI 463
Query: 307 CGNK------DDVLRVWKR--YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
G + +++L + +L YN ++ + + E +E++ +E ++
Sbjct: 464 YGRRQMFTKTNEILNFMNESGFTPSLATYNS----LMYMHSRSENFERSEEVLKEILAKG 519
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
+ D N +I AYCR G + +A + + + G P+V T+ Y ++ E +
Sbjct: 520 IKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAI 579
Query: 419 EAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 464
+ ++ +++ G KP++ + + Y K + A FI L
Sbjct: 580 DVVR---YMIKHGC--KPNQNTYNSVVDGYCKHNHRDDAIMFISSL 620
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 116/260 (44%), Gaps = 17/260 (6%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ +++++ V + +N+++ V+ Q G ++ + EM+ G ++ T++ L+SA +
Sbjct: 266 VFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYS 325
Query: 234 -AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL---SDKALAVLRKSEVLMM 289
S + +D M+EA G+ D + Y + + GL S+K A ++
Sbjct: 326 RCGSFDQAMDIYKRMLEA--GITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRC--K 381
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLL----KFDGME 345
N+ + Y ++ YA N ++ R+ ++ + ++ +L+ K D +
Sbjct: 382 PNELT--YCSLLHAYA---NGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLV 436
Query: 346 SAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
AE F E + + D+ N ++ Y RR + K ++ G P++ T+ +
Sbjct: 437 EAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLM 496
Query: 406 TGYLQNNQSEKGVEAMKKAL 425
+ ++ E+ E +K+ L
Sbjct: 497 YMHSRSENFERSEEVLKEIL 516
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 148/391 (37%), Gaps = 66/391 (16%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D +LD+ G ++ I+ + F R AL+I F P+ AI
Sbjct: 177 DKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEI---------FRNIPSPDAI 227
Query: 125 RLDLI----AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQM 178
+ I + + A + + E+ P V Y L++ A +KA ++ +M
Sbjct: 228 AYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEM 287
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG 238
DRG+ T+ +NS+M+ + G +++ SL+ M E+ T++ L+S
Sbjct: 288 VDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQ--- 344
Query: 239 EGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA 296
+ +D+ +++ G V D Y+ A G K G D+A ++++
Sbjct: 345 QNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMS----------- 393
Query: 297 YDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWES 356
K NL YN +I L K E A ++ E S
Sbjct: 394 --------------------GKGCTPNLVTYNT----LIDGLCKASKTEKAYELLESLVS 429
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
D+ ++D C+ G L KA ++ RG P+V T+ + G + + ++
Sbjct: 430 SGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDE 489
Query: 417 GVEAMKKALVLLEAGTRWKPSKECLAACLGY 447
K+ + SK+C A L Y
Sbjct: 490 AHHIFKEMV-----------SKDCTADALAY 509
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 143/363 (39%), Gaps = 64/363 (17%)
Query: 117 LTPADVAIR--LDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAE 172
+TP V +D + K E+A S + E+ PS Y L++ ++ ++A+
Sbjct: 292 VTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAK 351
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
++ + G V + Y+ + + + G + L+ EM KG + T++ L+
Sbjct: 352 DLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGL 411
Query: 233 AAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH 290
AS E K ++E+ G V D Y G K G DKAL M+
Sbjct: 412 CKASKTE---KAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALK--------MVE 460
Query: 291 NKFSRAYDFVITQYAA-------CGNKDDVLRVWK------------------------- 318
R + Y A G D+ ++K
Sbjct: 461 GMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSS 520
Query: 319 RYKQNLKVYN--RG--YICVISSLLKFDG------MESAEKIFEEWESRNLCHDIRIPNH 368
R K+ KV + RG YI V ++L+ DG ++ +FE+ R +I+ N
Sbjct: 521 RTKEAQKVVDGIRGTPYIDVYNALM--DGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNI 578
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLL 428
++D C+ G + +A + G P+V ++ ++ G + ++ ++ + + + ++
Sbjct: 579 VMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQ---MI 635
Query: 429 EAG 431
+AG
Sbjct: 636 QAG 638
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 130/309 (42%), Gaps = 26/309 (8%)
Query: 124 IRLDLIAKVQGIEQAASYF------NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQ 177
I +D + K +++A + CVP+ + Y +++ A ++A ++ Q
Sbjct: 578 IVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVS----YNIIIDGLFKASKPKEARQVLDQ 633
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
M G+ + YN++M + + + ++ M + G+D D T++ L+S + +
Sbjct: 634 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 693
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH------N 291
+++ M + VV T Y T K G L+++ +LM H
Sbjct: 694 LGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEG-------CLKQALLLMDHMTGHGVE 746
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
+ Y+ I + G D+ + + + Y VI L K + ++ A K+
Sbjct: 747 ANTVTYNIFIDRLCKEGRLDEASSLLS--EMDTLRDEVSYTTVIIGLCKAEQLDRASKLA 804
Query: 352 EEWES-RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
E + + LC N LIDA+ + L +A TL+ RG P+V T+ ++ T +
Sbjct: 805 REMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCK 864
Query: 411 NNQSEKGVE 419
++ +K E
Sbjct: 865 LDKVDKAWE 873
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 115/295 (38%), Gaps = 46/295 (15%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+LDQ ++ G P D ++ +F +RF A+ I M K + P +V
Sbjct: 630 VLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG---VDPDNVTYN---- 682
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
+ G+ Q L +AY E++ + +R+ +V
Sbjct: 683 TLISGLSQTNR-----------------LGDAY---------ELMHEMLRNGCVVSACTT 716
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
YN++++ + G K+ LM M G++ + T++I + + +++ M+
Sbjct: 717 YNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD 776
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN 309
R D Y T G KA D+A + R+ + S ++ +I +
Sbjct: 777 TLR----DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKR 832
Query: 310 KDDVLR-----VWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
D+ L V + ++ YN VI+ L K D ++ A ++F+E R +
Sbjct: 833 LDEALTLLGLMVQRGCSPSVITYNM----VITCLCKLDKVDKAWELFDEMAVRGI 883
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 94/235 (40%), Gaps = 4/235 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY AL++ Y ++ + + M RG V YN +M+ + G + + M
Sbjct: 540 VYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM 599
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
G D +++I++ AS + +++ M G+ D Y T + + K
Sbjct: 600 HSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQM-IQAGIPPDAVTYNTLMAQFCKEER 658
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN--RGY 331
D A+ +L K+ + + + Y+ +I+ + D + +N V + Y
Sbjct: 659 FDDAVGIL-KNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTY 717
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
+I L K ++ A + + + + N ID C+ G L +A +L+
Sbjct: 718 NTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLL 772
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 114/271 (42%), Gaps = 21/271 (7%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VP ++ +Y L+N Y E A QM+ R + I YN+++N +
Sbjct: 235 VPTRV----IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERIT 290
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
L+ EM++ G++ TF+ L+ A E +++ M+ + G+ + Y +
Sbjct: 291 NAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ-ENGLKPNVVSYGSI 349
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYK 321
+ + K G +A+A+L M H ++ Y+ +I Y G D + ++ K
Sbjct: 350 VNAFCKNGKIPEAVAILDD----MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK 405
Query: 322 QN-----LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRR 376
N + YN +I L + AE+I + L D N LI A C R
Sbjct: 406 SNGISPSIVTYN----LLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYR 461
Query: 377 GLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
G + KA L + G + VRT++ + +G
Sbjct: 462 GNIDKALDLQQRMHKYGIKSTVRTYHQLISG 492
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 123/284 (43%), Gaps = 5/284 (1%)
Query: 138 AASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMN 195
A F+ + E+ LP+ Y +++ + E + QM GL I YN +++
Sbjct: 82 AVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLS 141
Query: 196 VYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVV 255
+ G + +L+ EM + + D +T+SIL + D + + + + +
Sbjct: 142 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTI 201
Query: 256 LDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLR 315
D+T + +G K G A VL +S V Y+ +I Y G +
Sbjct: 202 GDYTC-SILLNGLCKDGKVSIAEEVL-QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFS 259
Query: 316 VWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
+ + K +++K + Y +I+ L K + + +A+ + E + + + N LIDAY
Sbjct: 260 TFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYG 319
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
R G L K ++ + Q G +PNV ++ + + +N + + V
Sbjct: 320 RTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 363
>gi|297825903|ref|XP_002880834.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326673|gb|EFH57093.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 797
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 121/277 (43%), Gaps = 41/277 (14%)
Query: 168 AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSI 227
E+A ++Q+M+D+G+V I+Y ++++ Y G L+ EM G D T+++
Sbjct: 403 VEEAIELLQEMKDKGIVPDVINYTTLIDGYCLKGKVVDALDLIDEMIGNGTSPDLITYNV 462
Query: 228 LLSACAAASDGEGIDKIVAMMEAD--------RGVVLDWTVYA----------------- 262
L+S A E + +I M+A+ V+++ +A
Sbjct: 463 LVSGLARNGHEEAVLEIYERMKAEGLKPNAVTDNVIIEGLCFARKVKEAEDFFMSLEQKC 522
Query: 263 -----TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC--GNKDDVLR 315
+ GY ++GLS KA + E + + + + + ++ C G D
Sbjct: 523 PENKASLVKGYCESGLSKKAFKLFVTLEYPLRKSVYIKLF------FSLCIEGCLDKAHT 576
Query: 316 VWKRYKQNLKVYNRGYIC--VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAY 373
V KR +V +C +I +L + + A+++F+ R L D+ +I Y
Sbjct: 577 VLKRM-WAYRVEPGRSMCGKMIGALCRLNNAIDAQQLFDTMVERGLIPDLFTYTIMIHTY 635
Query: 374 CRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
CR L KAE+L + RG +P+V T+ ++ YL+
Sbjct: 636 CRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLK 672
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 91/229 (39%), Gaps = 59/229 (25%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
++ A +A A+ + M +RGL+ Y M++ Y + +K +SL +M+++G
Sbjct: 596 MIGALCRLNNAIDAQQLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRG 655
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
I D T+++LL DR + LD + T G V+ +
Sbjct: 656 IKPDVVTYTVLL---------------------DRYLKLDPEHHET---GSVQGEVGK-- 689
Query: 278 LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISS 337
R SE+L +++A G DV+ Y +I
Sbjct: 690 ----RNSELL--------------REFSASGIGLDVV---------------SYTVLIDR 716
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
K D +E A ++F+ L DI LI +Y R+G + KA TL+
Sbjct: 717 QCKMDKLEQAAELFDRMIDSGLEPDIVAYTALISSYFRKGYIDKAVTLV 765
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 129/337 (38%), Gaps = 66/337 (19%)
Query: 149 LKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
L L V AL+ AY ++A ++ Q + V N +MN + G + +
Sbjct: 142 LVLIRVSGALVKAYVGLGMFDEAIDVLFQSKRLDCVPDIKACNFLMNRLIEFGKIGMVVA 201
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEG-----------------IDKIVAMMEAD 251
L ++++ G+ ++YT++I++ A D EG ID + E +
Sbjct: 202 LFKQLKQLGLCANEYTYAIVVKALCRKGDLEGAAMLLLESPSVFSYKTFIDGLCVNGETE 261
Query: 252 RGVVLDW--------------TVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS--- 294
+ VVL TV+ G+ + A +V+ + E + S
Sbjct: 262 KAVVLIEEMIDTNVLVGDDLRTVFCMVVRGFCNEMKMEAAESVILEMEKIGFGPDVSACS 321
Query: 295 -------------RAYDF--------------VITQYAACGNKDDV-LRVWKRYKQ---- 322
A F +++ C K D+ L +++K+
Sbjct: 322 AIIDRYCKNMNLPEALGFLDKMLGKGLKINCVIVSSILQCYCKMDMCLEALEKFKEFRDM 381
Query: 323 NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
N+ + Y +L K +E A ++ +E + + + D+ LID YC +G + A
Sbjct: 382 NIFLDRVCYNVAFDALSKLGRVEEAIELLQEMKDKGIVPDVINYTTLIDGYCLKGKVVDA 441
Query: 383 ETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
LI + GT P++ T+ ++ +G +N E +E
Sbjct: 442 LDLIDEMIGNGTSPDLITYNVLVSGLARNGHEEAVLE 478
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 121/276 (43%), Gaps = 7/276 (2%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PSV Y LL+A A +A +++ +MR +G + YN ++N G+ + ++
Sbjct: 195 PSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNI 254
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+ ++ G D T++ +L + + + ++++ A M +++ D + T +
Sbjct: 255 LSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNK-CAPDEVTFNTIVTSLC 313
Query: 270 KAGLSDKALAVL-RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVY 327
+ GL D+A+ V+ SE + + + Y ++ G DD + + R K K
Sbjct: 314 QQGLVDRAIKVVDHMSEHGCIPDIVT--YSSILDGLCDVGRVDDAVELLSRLKSYGCKPD 371
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y V+ L + E AE++ E + D N +I + C++GL+ +A ++
Sbjct: 372 TIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVE 431
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ G P++ T+ + G + +E +
Sbjct: 432 QMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSN 467
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 115/287 (40%), Gaps = 23/287 (8%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKS-AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
+C P+++ +V +L C K ++A +++QM + G + YNS+++
Sbjct: 402 DCPPDEVTFNTVIASL-----CQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNER 456
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI-VAMMEADRGVVLDWTV 260
L+ ++ G D TF+ LL + E +++ V MM +D D T
Sbjct: 457 CIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSD--CPPDATT 514
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVW 317
+ T + + GL +A+ L+ +M N Y+ V+ G + L++
Sbjct: 515 FNTVITSLCQKGLLLQAIETLK----IMAENGCIPNQSTYNIVVDALLKAGKTQEALKLL 570
Query: 318 KRYKQ---NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
+L YN VIS++ K ME A + S L D L C
Sbjct: 571 SGMTNGTPDLITYNT----VISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGIC 626
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
R +A ++ + Q G P+ + + G+ QN +++ ++
Sbjct: 627 REDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCF 673
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 126/303 (41%), Gaps = 32/303 (10%)
Query: 144 CVPEKLKLPSVYIALLNAYACAKS-AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
C P+++ ++ +L C + ++A ++ M + G + + Y+S+++ G
Sbjct: 298 CAPDEVTFNTIVTSL-----CQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGR 352
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
L+ ++ G D ++ +L + E ++++A M D +
Sbjct: 353 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVC-SDCPPDEVTFN 411
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKR 319
T + + GL D+A+ V+ + M N + Y+ +I DD + +
Sbjct: 412 TVIASLCQKGLVDRAIKVVEQ----MSENGCNPDIVTYNSIIDGLCNERCIDDAMELLS- 466
Query: 320 YKQNLKVYN-RGYICVISSLLK----FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
NL+ Y + I ++LLK D E AE++ + D N +I + C
Sbjct: 467 ---NLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLC 523
Query: 375 RRGLLHKA-ETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTR 433
++GLL +A ETL A+ G PN T+ ++ L+ +++ +AL LL T
Sbjct: 524 QKGLLLQAIETLKIMAE-NGCIPNQSTYNIVVDALLKAGKTQ-------EALKLLSGMTN 575
Query: 434 WKP 436
P
Sbjct: 576 GTP 578
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 113/300 (37%), Gaps = 16/300 (5%)
Query: 127 DLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKS-AEKAEIIMQQMRDRGLVK 185
D +A V I C+P LP V +L C+ AE + + G
Sbjct: 76 DALALVDSIASGGGSGKCLP----LPVVPCNILIKRLCSGGRVADAERVFATL---GASA 128
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKI 244
+ YN+M+N Y + G + L+ M D +TF+ L+ A C + +
Sbjct: 129 TVVTYNTMVNGYCRAGRIEDARRLISGMPFPP---DTFTFNPLIRALCVRGRVPDALAVF 185
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
M+ RG Y+ KA +A+ +L + Y+ +I
Sbjct: 186 DDMLH--RGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIV-TYNVLINAM 242
Query: 305 AACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
G+ D+ L + + K Y V+ SL + + E++F E S D
Sbjct: 243 CNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDE 302
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
N ++ + C++GL+ +A ++ G P++ T+ + G + + VE + +
Sbjct: 303 VTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSR 362
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 119/261 (45%), Gaps = 4/261 (1%)
Query: 149 LKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
L +Y ++NAY + S ++A + M G V + +N++M + ++ + K
Sbjct: 86 LTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWW 145
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ +E++ K + D Y+F I++ C A +++AM+E + G+ + +Y T G
Sbjct: 146 IFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLE-EFGLSPNVVIYTTLIDGC 203
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
K G A + K + L + Y ++ + G + + ++++ K++ V N
Sbjct: 204 CKYGNVMLAKNLFCKMDRLGLVPN-PHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPN 262
Query: 329 R-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y C+IS ++ A K+F E + + + N LI CR +A L++
Sbjct: 263 AYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVH 322
Query: 388 KAQLRGTEPNVRTWYLMATGY 408
K G PN+ T+ ++ G+
Sbjct: 323 KVNKVGLSPNIVTYNILINGF 343
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 127/317 (40%), Gaps = 13/317 (4%)
Query: 115 FVLTPADVAIRLDLI---AKVQGIEQAASYFNCVPEKLKL---PSVYIALLNAYACAKSA 168
F L+P +V I LI K + A + F C ++L L P Y L+N +
Sbjct: 187 FGLSP-NVVIYTTLIDGCCKYGNVMLAKNLF-CKMDRLGLVPNPHTYSVLMNGFFKQGLQ 244
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
+ + + M+ G+V YN +++ Y G K + EM EKGI C T++IL
Sbjct: 245 REGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNIL 304
Query: 229 LSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
+ C GE + + + + G+ + Y +G+ G D A+ + + +
Sbjct: 305 IGGLCRGKKFGEAVKLVHKVNKV--GLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSS 362
Query: 288 MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMES 346
+ Y+ +I Y+ N L + K ++ ++ Y +I + + + E
Sbjct: 363 GLSPTLV-TYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEK 421
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
A ++ E L D+ + LI C G + +A L +PN + M
Sbjct: 422 ACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIH 481
Query: 407 GYLQNNQSEKGVEAMKK 423
GY + S + + + +
Sbjct: 482 GYCKEGSSYRALRLLNE 498
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 2/188 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N + + A + Q++ GL + YN+++ Y + N L+ EME
Sbjct: 336 YNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEME 395
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
E+ I K T++IL+ A A + E ++ ++ME G+V D Y+ G G +
Sbjct: 396 ERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKS-GLVPDVYTYSVLIHGLCVHG-N 453
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
K + L KS M S Y+ +I Y G+ LR+ + V N C
Sbjct: 454 MKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCS 513
Query: 335 ISSLLKFD 342
LL D
Sbjct: 514 TIGLLCRD 521
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 180/436 (41%), Gaps = 29/436 (6%)
Query: 11 YNIKAQLGLGNVLDSSSSYSTATGTSTREVTISL---RKGSSMYKLYRMLSPMGDP---- 63
YN A+ G G V + +Y+ G R + L G+ + K +R+ + P
Sbjct: 72 YNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKG 131
Query: 64 -------NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFV 116
+D+M +L + E D+ I++K R AL++ M
Sbjct: 132 LCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGG 191
Query: 117 LTPADVAIR--LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAE 172
P V+ ++ K +A S ++ + ++ P V Y +++ A ++ +KA
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM-----EEKGIDCDKYTFSI 227
++ M G++ Y S+M+ Y +G K+ + ++ E G++ D T+
Sbjct: 252 EVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCT 311
Query: 228 LLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
LL A G+ ++ +M G+ D VY Y K G D+A+ V K
Sbjct: 312 LLQGYATKGALVGMHALLDLM-VRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQ 370
Query: 288 MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMES 346
+ N + Y VI G +D + +++ + L N Y +I L + E
Sbjct: 371 GL-NPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 429
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
AE++ E R +C + N +ID++C+ G + ++E L G +P++ T+ +
Sbjct: 430 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 489
Query: 407 GYLQNNQSEKGVEAMK 422
GY + + EAMK
Sbjct: 490 GYCLAGKMD---EAMK 502
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 149/352 (42%), Gaps = 24/352 (6%)
Query: 66 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV--A 123
M LLD V G D I+I + + A+ + M ++ L P V
Sbjct: 324 GMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQG---LNPDAVTYG 380
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDR 181
+ ++ K +E A YF + ++ P VY +L++ E+AE ++ +M DR
Sbjct: 381 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 440
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEG 240
G+ TI +NS+++ + + G + + L M G+ D T+S L+ C A E
Sbjct: 441 GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 500
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV------LMMHNKFS 294
+ + M+ G+ + Y T +GY K AL + ++ E ++ +N
Sbjct: 501 MKLLSGMVSV--GLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIIL 558
Query: 295 RAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEE 353
+ F + AA K+ +R+ + Q L YN ++ L K + A ++F+
Sbjct: 559 QGL-FQTRRTAAA--KELYVRITESGTQIELSTYN----IILHGLCKNKLTDDALRMFQN 611
Query: 354 WESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
+L + R N +IDA + G +A+ L G PN T+ LMA
Sbjct: 612 LCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMA 663
>gi|326509863|dbj|BAJ87147.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 757
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 116/294 (39%), Gaps = 13/294 (4%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y LLNA+ E A + +M + GL + +I YN M+ Y ++ L E
Sbjct: 288 TTYNTLLNAWVRKGDLESARKVFDEMPEAGLERNSISYNVMIKGYVDANKVEEALGLFTE 347
Query: 213 MEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
M EKG+ + TF++L+ C K VA M R D +V+ S KA
Sbjct: 348 MGEKGLRLTEKTFAVLMPGLCDDEGKAAEARKAVADMAERRLTPKDKSVFLRLVSTLCKA 407
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN--- 328
G D AL V +KS R Y ++ A G D ++V + + +
Sbjct: 408 GDFDGALEVHKKSGQFKHVLVDPRQYGVLMESLCAGGKCDGAVQVLDELLEKGTLLSPKS 467
Query: 329 -----RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
Y VI L + AE F + + + D N LI + + G L A+
Sbjct: 468 PVLEAPAYNPVIEYLCNNGNTDKAETFFRQLMKKGV-DDKSAFNSLIRGHAKEGALDAAK 526
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPS 437
++ RG + + L+ +L+ N+ A+ ++E G +P+
Sbjct: 527 EILAIMTRRGVPTDPHSHALLIDSFLKKNEPADAKTALDS---MMEHGHLPRPA 577
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 74/398 (18%), Positives = 154/398 (38%), Gaps = 27/398 (6%)
Query: 89 IIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQA-------ASY 141
+I R +LQ + +++ F PA A+ + ++A + A
Sbjct: 116 VISAAAAANRADLSLQFFRFAYRRAGFRPEPATFALLVPILASKGMLNHARCILLDTMPS 175
Query: 142 FNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
F+ P++ + AL+ AY A ++A + + M + G+ + + YN+++ G
Sbjct: 176 FSVCPDE----ATVAALVAAYGRAGIPQEAVKLFRLMPELGITRTALSYNAVLKAILCRG 231
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVY 261
+ + M G+ T++ L+ E ++ M+ GV D T Y
Sbjct: 232 REAMARRVYNAMIADGVAPTLSTYNTLIWGFGLCKKMESAVRVFGDMKG-HGVAPDVTTY 290
Query: 262 ATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
T + +V+ G + A V + E + N S Y+ +I Y ++ L ++
Sbjct: 291 NTLLNAWVRKGDLESARKVFDEMPEAGLERNSIS--YNVMIKGYVDANKVEEALGLFTEM 348
Query: 321 -KQNLKVYNRGYICVISSLLKFDG--MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
++ L++ + + ++ L +G E+ + + + E R D + L+ C+ G
Sbjct: 349 GEKGLRLTEKTFAVLMPGLCDDEGKAAEARKAVADMAERRLTPKDKSVFLRLVSTLCKAG 408
Query: 378 LLHKA-ETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKP 436
A E Q + + R + ++ + + V+ + + LLE GT P
Sbjct: 409 DFDGALEVHKKSGQFKHVLVDPRQYGVLMESLCAGGKCDGAVQVLDE---LLEKGTLLSP 465
Query: 437 SKECLAA-----CLGYYKKERDIEGADYFIKLLTGKEI 469
L A + Y + + A+ F + L K +
Sbjct: 466 KSPVLEAPAYNPVIEYLCNNGNTDKAETFFRQLMKKGV 503
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 132/298 (44%), Gaps = 19/298 (6%)
Query: 136 EQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
E A FN + ++ P+V + L++A A E+A +++ M RG T YN++
Sbjct: 290 EGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTL 349
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADR 252
++ + G L ME KGI+ D ++++L++ C + E MM +
Sbjct: 350 IDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKE- 408
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK-- 310
++ Y T +G + G A + + +V H+ + + I C N
Sbjct: 409 -IMPTVITYNTLLTGLFREGKVRDAWNLFGEMKV---HDLTPESCTYNILLDGLCKNNHL 464
Query: 311 DDVLRVWK-----RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
+ + ++ ++ +++++N C+I L K +E A ++F L ++
Sbjct: 465 SEAMELFHYLENHDFQPSIQIFN----CLIDGLCKARKIEIARELFNRLSHEGLEPNVIT 520
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+I C+ G L A+ L + +G PN+ T+ + G+ QN++ +K VE +++
Sbjct: 521 YTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQE 578
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 121/298 (40%), Gaps = 40/298 (13%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ++++ +K + + +M+ RG+ + Y+S+++ TG ++ L +EM
Sbjct: 241 YCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMV 300
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
++G+ + TF++L+ A A E + ++ +M RG D Y T G+ G
Sbjct: 301 DEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLM-IQRGESPDTFTYNTLIDGFCLEGRI 359
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG-------------------------- 308
D A + E + + +Y+ +I Y G
Sbjct: 360 DDARDLFVSMESKGIETD-AVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNT 418
Query: 309 ------NKDDVLRVWKRYKQNLKVYNR-----GYICVISSLLKFDGMESAEKIFEEWESR 357
+ V W + + +KV++ Y ++ L K + + A ++F E+
Sbjct: 419 LLTGLFREGKVRDAWNLFGE-MKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENH 477
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+ I+I N LID C+ + A L + G EPNV T+ +M G ++ Q E
Sbjct: 478 DFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLE 535
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 18/268 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y AL++ A + Q+ +RG++ + YNS+++ G ++++ L+ +M
Sbjct: 197 MYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM 256
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ +D D YTF+IL+ A ++AMM + RG D Y GY
Sbjct: 257 VRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM-SKRGEKPDIVTYNALMEGYCSREN 315
Query: 274 SDKALAVLRK-------SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLK 325
+A + + +VL Y+ +I Y D+ + ++K +NL
Sbjct: 316 VHEARELFNRMVKRGLEPDVL--------NYNVLIDGYCKTKMVDEAMVLFKELCNKNLV 367
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
Y +I L + +K+ +E D+ N LIDA C+ G + +A +
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV 427
Query: 386 IYKAQLRGTEPNVRTWYLMATGY-LQNN 412
+ +G +PN+ T+ M GY L+NN
Sbjct: 428 LVMMMKKGVKPNIVTYNAMMDGYCLRNN 455
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 121/294 (41%), Gaps = 40/294 (13%)
Query: 133 QGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
+ + +A FN + ++ P V Y L++ Y K ++A ++ +++ ++ LV Y
Sbjct: 314 ENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASY 373
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMME 249
NS+++ +G + L+ EM D T++IL+ A C E + +V MM+
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN 309
+GV + Y GY + N + A D + + G
Sbjct: 434 --KGVKPNIVTYNAMMDGYC-------------------LRNNVNVAKD-IFNRMVKSGL 471
Query: 310 KDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
+ D+L Y +I+ K + ++ A +F+E +NL DI N L
Sbjct: 472 EPDILN---------------YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSL 516
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
ID C G + + L+ + G P+V T+ ++ + + +K + ++
Sbjct: 517 IDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQ 570
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 122/298 (40%), Gaps = 17/298 (5%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
LLD+ +P D+ I+I R AL + + M KK + P V +D
Sbjct: 392 LLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG---VKPNIVTYNAMMD 448
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+ A FN + + P + Y L+N Y + ++A ++ ++MR + L+
Sbjct: 449 GYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIP 508
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
YNS+++ G + L+ EM + G D T++ILL A + DK +
Sbjct: 509 DIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKT---QPFDKAI 565
Query: 246 AMM-EADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
++ + G+ D+ K A L+ L+MH + I
Sbjct: 566 SLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKH---LLMHGCSPNVQTYTILIN 622
Query: 305 AAC--GNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNL 359
A C G+ + + + + + N + + + +I LL+ + + AEK+ EE +R L
Sbjct: 623 ALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 129/315 (40%), Gaps = 10/315 (3%)
Query: 116 VLTPADVAI---RLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEK 170
V P ++ L I ++ A S F + K PS+ + L+N Y
Sbjct: 49 VFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAF 108
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS 230
A ++ + G + +N+++N + G K + +G D++T+ L++
Sbjct: 109 AFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLIN 168
Query: 231 ACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMM 289
+ + ++ ME V + +Y+ G K G AL + + E ++
Sbjct: 169 GLSKNGQIKAALHLLQEMEKS-SVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGIL 227
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVW-KRYKQNLKVYNRGYICVISSLLKFDGMESAE 348
+ + Y+ +I + G +V ++ K ++N+ + + +I +L K + A+
Sbjct: 228 LDAVT--YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+ R DI N L++ YC R +H+A L + RG EP+V + ++ GY
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGY 345
Query: 409 LQNNQSEKGVEAMKK 423
+ ++ + K+
Sbjct: 346 CKTKMVDEAMVLFKE 360
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 151/366 (41%), Gaps = 31/366 (8%)
Query: 64 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPA-DV 122
+DS+ LLD V+ +Q R+ I F L I + S F+ A
Sbjct: 144 SDSLTLLLDHLVK------TKQFRVTINVF---------LNILESDFRPSKFMYGKAIQA 188
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRD 180
A++L + K G+E FN + PSV+I L++ K AE + +M
Sbjct: 189 AVKLSDVGK--GLE----LFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLA 242
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
R L+ I YN++++ Y + GN +K + M+ I+ TF+ LL A E
Sbjct: 243 RRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVED 302
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
+ ++ M+ D G V D ++ GY ++KA A L E + AY
Sbjct: 303 AENVLKEMK-DLGFVPDAFTFSILFDGYSS---NEKAEAALGVYETAVDSGVKMNAYTCS 358
Query: 301 ITQYAAC--GNKDDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESR 357
I A C G + + R V N Y +I + + A E E +
Sbjct: 359 ILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ 418
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ D N LI +C G + AE + K +L+G P+V T+ ++ GY + + +K
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 418 VEAMKK 423
+ +K+
Sbjct: 479 FDILKE 484
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 132/284 (46%), Gaps = 11/284 (3%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
+ +D + K + + A F+ + + LPS+ Y L++ Y A + EK+ + ++M+
Sbjct: 219 VLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKAD 278
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
+ I +N+++ ++ G + ++++ EM++ G D +TFSIL ++ E
Sbjct: 279 HIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAA 338
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL-RKSEVLMMHNKFSRAYDFV 300
+ D GV ++ + + K G +KA +L R+ ++ N+ Y+ +
Sbjct: 339 LGVYETA-VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEV--IYNTM 395
Query: 301 ITQYAACGNKDDV---LRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
I Y C D V +++ KQ +K + Y C+I + ME+AEK + + +
Sbjct: 396 IDGY--CRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK 453
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+ + N LI Y R+ K ++ + + GT PNV ++
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 113/254 (44%), Gaps = 7/254 (2%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
LLNA EKAE I+ + +GLV + YN+M++ Y + G+ + ME++G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
+ D ++ L+ + E +K V M+ +GV Y GY + DK
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL-KGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 278 LAVLRKSE-VLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN--RGYICV 334
+L++ E M N S Y +I G+K ++ KR ++ V R Y +
Sbjct: 479 FDILKEMEDNGTMPNVVS--YGTLINCLCK-GSKLLEAQIVKRDMEDRGVSPKVRIYNML 535
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I +E A + +E + + ++ N LID G L +AE L+ + +G
Sbjct: 536 IDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Query: 395 EPNVRTWYLMATGY 408
+P+V T+ + +GY
Sbjct: 596 KPDVFTYNSLISGY 609
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 108/242 (44%), Gaps = 19/242 (7%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PSV Y L+ Y +K I+++M D G + + Y +++N + + +
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 516
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+ME++G+ +++L+ C + E + M +G+ L+ Y T G
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM-LKKGIELNLVTYNTLIDGLS 575
Query: 270 KAG-LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN----- 323
G LS+ +L S + + F+ Y+ +I+ Y GN + +++ K++
Sbjct: 576 MTGKLSEAEDLLLEISRKGLKPDVFT--YNSLISGYGFAGNVQRCIALYEEMKRSGIKPT 633
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
LK Y+ ++ SL +G+E E++F E +L D+ + N ++ Y G + KA
Sbjct: 634 LKTYH-----LLISLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAF 685
Query: 384 TL 385
L
Sbjct: 686 NL 687
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 116/270 (42%), Gaps = 23/270 (8%)
Query: 151 LPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
+P+V Y L+N +A+I+ + M DRG+ K YN +++ G +
Sbjct: 491 MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550
Query: 209 LMHEMEEKGIDCDKYTFSIL---LSACAAASDGEGIDKIVAMMEADR-GVVLDWTVYATA 264
EM +KGI+ + T++ L LS S+ E + ++E R G+ D Y +
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDL-----LLEISRKGLKPDVFTYNSL 605
Query: 265 ASGYVKAGLSDKALAV---LRKSEVLMMHNKFSRAYDFVITQYAACGNK-DDVLRVWKRY 320
SGY AG + +A+ +++S + + Y +I+ G + + L
Sbjct: 606 ISGYGFAGNVQRCIALYEEMKRSGI----KPTLKTYHLLISLCTKEGIELTERLFGEMSL 661
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
K +L VYN V+ ME A + ++ +++ D N LI + G L
Sbjct: 662 KPDLLVYNG----VLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLC 717
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+ +LI + R EP T+ ++ G+ +
Sbjct: 718 EVRSLIDEMNAREMEPEADTYNIIVKGHCE 747
>gi|297850366|ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
lyrata]
gi|297338906|gb|EFH69323.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
lyrata]
Length = 1490
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 128/281 (45%), Gaps = 37/281 (13%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
++L YA + A ++M++R +V +NS++ Y Q G +++ L+ EME++
Sbjct: 221 SILAVYAKCGEWDFATKFFRRMKERDVVA----WNSVLLAYCQNGKHEEAVELVEEMEKE 276
Query: 217 GIDCDKYTFSIL------LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
GI T++IL L C AA D ++ ME + G+ D + SG +
Sbjct: 277 GISPGLVTWNILIGGYNQLGKCDAAMD------LMQKME-NFGITADVFTWTAMISGLIH 329
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC--------GNKDDVLRVWKRYKQ 322
G+ +AL + RK + + A +++ +AC G++ + V +
Sbjct: 330 NGMRYQALDMFRK---MFLAGVVPNAVT-IMSAVSACSYLKVINLGSEVHSIAVKMGFID 385
Query: 323 NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
++ V N ++ K +E A K+F+ +++ D+ N +I YC+ G KA
Sbjct: 386 DVLVGNS----LVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKA 437
Query: 383 ETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
L + Q PN+ TW M +GY++N + ++ ++
Sbjct: 438 YELFTRMQDANVRPNIITWNTMISGYIKNGDEGEAMDLFQR 478
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 114/287 (39%), Gaps = 50/287 (17%)
Query: 142 FNCVPEKLKLPSVYIA--LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQ 199
F PE P V++ LL+ YA A + MR+R L +++M+ Y +
Sbjct: 107 FGLFPE----PDVFVETKLLSMYAKCGCLVDARKVFDSMRERNLYT----WSAMIGAYSR 158
Query: 200 TGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWT 259
++++ L M E+G+ D + F +L CA D E I +++
Sbjct: 159 ENRWREVSKLFRLMMEEGVLPDDFLFPKILQGCANCGDVETGKLIHSVV----------- 207
Query: 260 VYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR 319
+K G+S + LR S + ++ YA CG D + ++R
Sbjct: 208 ---------IKLGMS----SCLRVS-------------NSILAVYAKCGEWDFATKFFRR 241
Query: 320 YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
K+ V + V+ + + E A ++ EE E + + N LI Y + G
Sbjct: 242 MKERDVV---AWNSVLLAYCQNGKHEEAVELVEEMEKEGISPGLVTWNILIGGYNQLGKC 298
Query: 380 HKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
A L+ K + G +V TW M +G + N + ++ +K +
Sbjct: 299 DAAMDLMQKMENFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL 345
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 129/313 (41%), Gaps = 26/313 (8%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
+L++ Y+ E A + +++ K +NSM+ Y Q G K L M++
Sbjct: 392 SLVDMYSKCGKLEDARKVFDSVKN----KDVYTWNSMITGYCQAGYCGKAYELFTRMQDA 447
Query: 217 GIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
+ + T++ ++S D GE +D + ME D V + + +GY++ G D
Sbjct: 448 NVRPNIITWNTMISGYIKNGDEGEAMD-LFQRMEKDGKVQRNTATWNLIIAGYIQNGKKD 506
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY----KQNLKVYNRGY 331
AL + RK M ++F +++ AC N V + + ++NL +
Sbjct: 507 DALEIFRK----MQFSRFMPNSVTILSLLPACANLLGTKMVREIHGCVLRRNLDAIHAVK 562
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+ + K + ++ IF E++ DI N LI Y G A L + +
Sbjct: 563 NALTDTYAKSGDIGYSKTIFMGMETK----DIITWNSLIGGYVLHGSYGPALELFNQMKT 618
Query: 392 RGTEPNVRTW--YLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYK 449
+G +PN T ++A G + N V+ KK + P+ E +A + Y
Sbjct: 619 QGIKPNRGTLSSIILAHGLMGN------VDEGKKVFYSIANDYHIIPALEHCSAMVSLYG 672
Query: 450 KERDIEGADYFIK 462
+ +E A FI+
Sbjct: 673 RSNRLEEALQFIQ 685
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 136/318 (42%), Gaps = 28/318 (8%)
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRD 180
I +D + KV ++A F + + +P+V Y +L++ + CA E+++ + +M D
Sbjct: 66 CIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVD 125
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
+G+ + +N ++++ + G + L+ ++GI D T++ L+ D
Sbjct: 126 QGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSS 185
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS------ 294
K+ M + +G + Y +GY K + + E + ++N+
Sbjct: 186 ARKLFLSMPS-KGCEHNEISYTILINGYCK---------IWKVEEAMNLYNEMPQVGKRP 235
Query: 295 --RAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIF 351
+ Y ++T G D +++ K + V + Y+ + L K + A ++F
Sbjct: 236 NVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELF 295
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
E +S N D + LID C+ G + A + G +PNV T +M G+ +
Sbjct: 296 NELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCR- 354
Query: 412 NQSEKGVEAMKKALVLLE 429
VE + KA +L E
Sbjct: 355 ------VEQVDKANILFE 366
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 156/368 (42%), Gaps = 28/368 (7%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA--IRLD 127
L + V G D+ L ++ RFS A + M K + P V +D
Sbjct: 281 LYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIG---VAPNHVTYCTFID 337
Query: 128 LIAKVQGIEQAASYFN-CVPEKLKLPSV-YIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+AKVQ + ++ V + + V Y +++ E+A+ +++ +
Sbjct: 338 SLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITP 397
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-----CAAASDGEG 240
+ Y +++ + + GN + ++ +MEEK + + TFS +L+ C A + G
Sbjct: 398 NCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGY- 456
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
+ K+ D G+ + Y T G+ K + AL V R M+H A +F+
Sbjct: 457 MRKM-----KDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRD----MLHEGV-EANNFI 506
Query: 301 ITQYAAC----GNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
+ GN ++ ++K ++ L + + Y ++ L K M +A K+ +E
Sbjct: 507 VDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELM 566
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
RNL D + N I+ CR G +A++ + + + G EP+ T+ M + + +
Sbjct: 567 ERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTS 626
Query: 416 KGVEAMKK 423
K ++ + +
Sbjct: 627 KALKLLNE 634
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 131/313 (41%), Gaps = 28/313 (8%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
NCV Y L++A+ A + + AE ++ QM ++ + + ++S++N + G
Sbjct: 398 NCV--------TYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGC 449
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG-IDKIVAMMEADRGVVLDWTVY 261
K M +M++ GI + T+ L+ E +D M+ GV + +
Sbjct: 450 IAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLH--EGVEANNFIV 507
Query: 262 ATAASGYVKAGLSDKALAVLR---KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK 318
+ +G K G ++A A+ + + +L+ H ++ D + GN L+V +
Sbjct: 508 DSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKT----GNMPAALKVGQ 563
Query: 319 RY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
++NL Y I+ L + A+ +E + L D N +I A CR G
Sbjct: 564 ELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREG 623
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPS 437
KA L+ + + +PN+ T+ + G L E GV K L+ A + P+
Sbjct: 624 NTSKALKLLNEMKWSSIKPNLITYTTLVVGLL-----EAGVVEKAKYLLNEMASAGFTPT 678
Query: 438 ----KECLAACLG 446
+ L AC G
Sbjct: 679 PLTYRRVLQACSG 691
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 118/279 (42%), Gaps = 25/279 (8%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
AL++ Y + A ++++M +GL + YN+++ ++ +G+ + M+
Sbjct: 194 ALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKAD 253
Query: 217 GIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
G++ T + L+ C E M+ + GV+ D + G + G
Sbjct: 254 GVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRS--GVLPDVVTLSALVDGLCRDGRFS 311
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL----KVYNRG- 330
+A A+ R+ +K A + V C D + +V +R ++L ++ +RG
Sbjct: 312 EAYALFRE------MDKIGVAPNHVTY----CTFIDSLAKV-QRVNESLGLLGEMVSRGV 360
Query: 331 ------YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
Y V+ L K +E A+ + S N+ + L+DA+CR G + AE
Sbjct: 361 AMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQ 420
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
++ + + + PNV T+ + G ++ K M+K
Sbjct: 421 MLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRK 459
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 13/216 (6%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P Y +L A + ++S + + M GL YN++++V G +K ++
Sbjct: 679 PLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLD 738
Query: 212 EMEEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
EM +GI D TF +++L C ++ M+ +G+ + + T G
Sbjct: 739 EMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLH--QGLSPNIATFNTLLGGLES 796
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLK 325
AG +A V+ + + + + + YD ++T YA NK + LR++ K +
Sbjct: 797 AGRIGEADTVICEMKKMGLEPN-NLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKAS 855
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
YN +IS K M A+++F E + R + H
Sbjct: 856 TYNS----LISDFAKAGMMNQAKELFSEMKRRGVLH 887
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 115/294 (39%), Gaps = 22/294 (7%)
Query: 119 PADVAIRLDLIAKVQGIEQAASYFNCVP-EKLKLPSVYIAL--LNAYACAKSAEKAEIIM 175
PA + RL G+ AAS F VP + L L S+ ++ L+A A S ++
Sbjct: 50 PARLLRRLIPALASSGLVAAASRFRPVPGDPLTLNSIILSYCSLHALRPALSLLRSSSGP 109
Query: 176 QQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAA 235
Q + T+ YN + + G+ + ++ EM ++G+ D T S L +
Sbjct: 110 QPQ----VAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRT 165
Query: 236 SDGEGIDKIVAMMEADRGV----VLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
+ M+ RG+ V+ W GY K ALAV+ + M
Sbjct: 166 GLVGEAAALAEMLVRGRGIDGLGVVGWNAL---IDGYCKVQDMAAALAVVER----MTTQ 218
Query: 292 KFSR---AYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESA 347
S Y+ ++ + G+ D V +R K + ++ + +I K +E A
Sbjct: 219 GLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEA 278
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
++E + D+ + L+D CR G +A L + G PN T+
Sbjct: 279 FTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTY 332
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 111/273 (40%), Gaps = 45/273 (16%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y +++A + KA ++ +M+ + I Y +++ + G +K L++E
Sbjct: 610 ATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNE 669
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M G T+ +L AC+ + I ++ +M G+ D TVY T G
Sbjct: 670 MASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMG-AGLHADITVYNTLVHVLCCHG 728
Query: 273 LSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
++ KA VL + M+ + ++ +I + + D+ + Y Q L
Sbjct: 729 MTRKATIVLDE----MLGRGIAPDTITFNALILGHCKSSHLDN---AFATYAQMLHQGLS 781
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
I ++LL G+ESA +I E A+T+I +
Sbjct: 782 PNIATFNTLL--GGLESAGRIGE-----------------------------ADTVICEM 810
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ G EPN T+ ++ TGY + + VEA++
Sbjct: 811 KKMGLEPNNLTYDILVTGYAKKSNK---VEALR 840
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 129/287 (44%), Gaps = 21/287 (7%)
Query: 147 EKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
E++K P+ + ++ YA +A + MR RG+ + Y S+++ Y + +
Sbjct: 295 ERIKKPARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDME 354
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG------IDKIVAMMEADRGVVLDW 258
+ S + +M+E+G++ T+SI++ A + + + +V ME + G+
Sbjct: 355 EALSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREME-EEGIDAPI 413
Query: 259 TVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW 317
+Y T +GY G +K L V ++ E + S Y +I Y G L V
Sbjct: 414 DIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVIS--YGCLINMYTKMGKVSKALEVS 471
Query: 318 KRY-----KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
K K N+K Y+ +I+ LK +A +FE+ L D+ + N++I A
Sbjct: 472 KMMESAGIKHNMKTYS----MLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKA 527
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+C G + +A ++ + Q + P RT+ + G+ + + + +E
Sbjct: 528 FCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALE 574
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 107/271 (39%), Gaps = 38/271 (14%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y ++N Y + EK I+ +++++ G I Y ++N+Y + G K + M
Sbjct: 415 IYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMM 474
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E GI + T+S+L++ G K+ DWT T +K GL
Sbjct: 475 ESAGIKHNMKTYSMLIN---------GFLKLK-----------DWTNAFTVFEDVIKDGL 514
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYI 332
K +V++ Y+ +I + GN D + + K K+ + +R ++
Sbjct: 515 ---------KPDVVL--------YNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFM 557
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I + M A +IF+ + N L+ + + KA ++ + L
Sbjct: 558 PIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALA 617
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G P+ T+ + GY + K E K
Sbjct: 618 GVSPDEHTYTTIMNGYAALGDTGKAFEYFTK 648
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 109/249 (43%), Gaps = 3/249 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+N + K A + + + GL + YN+++ + GN + ++ EM
Sbjct: 485 TYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEM 544
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
++K TF ++ A A + +I MM G + + G V+
Sbjct: 545 QKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRS-GCIPTVHTFNALVLGLVEKRQ 603
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYI 332
+KA+ +L + L + Y ++ YAA G+ + + + + L++ Y
Sbjct: 604 MEKAVEILDEM-ALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYE 662
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
++ + K M+SA + E ++N+ + + N LID + RRG + +A L+ + +
Sbjct: 663 ALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQE 722
Query: 393 GTEPNVRTW 401
G +P++ T+
Sbjct: 723 GVQPDIHTY 731
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 154 VYIALLNAYACAKSA--EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
Y ALL A C KS + A + ++M + + + T YN +++ + + G+ + LM
Sbjct: 660 TYEALLKA--CCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQ 717
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
+M+++G+ D +T++ ++AC A D K + MEA GV + Y T G+ A
Sbjct: 718 QMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEA-LGVKPNVKTYTTLIHGWACA 776
Query: 272 GLSDKAL 278
L +KAL
Sbjct: 777 SLPEKAL 783
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 114/276 (41%), Gaps = 43/276 (15%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++ +++ +A A +A I MR G + +N+++ + +K ++ EM
Sbjct: 555 TFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEM 614
Query: 214 EEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
G+ D++T++ +++ AA D G+ + + + G+ LD Y K+G
Sbjct: 615 ALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKL--RNEGLELDVFTYEALLKACCKSG 672
Query: 273 LSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
ALAV R+ S + N F Y+ +I +A G+ VW+
Sbjct: 673 RMQSALAVTREMSAQNIPRNTF--VYNILIDGWARRGD------VWE------------- 711
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
A + ++ + + DI I+A C+ G + +A I + +
Sbjct: 712 ---------------AADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEA 756
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGV---EAMKKA 424
G +PNV+T+ + G+ + EK + E MK A
Sbjct: 757 LGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLA 792
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY L++ +A +A +MQQM+ G+ Y S +N + G+ + + EM
Sbjct: 695 VYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEM 754
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVY----------AT 263
E G+ + T++ L+ A AS E + M+ G+ D VY AT
Sbjct: 755 EALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKL-AGLKPDKAVYHCLMTSLLSRAT 813
Query: 264 AASGYVKAGL 273
A Y+ +G+
Sbjct: 814 VAEAYIYSGI 823
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 122/299 (40%), Gaps = 44/299 (14%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y L+N Y A + A + +MR + + +++N + + G +K + + +
Sbjct: 274 ATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQ 333
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
++E G++ D Y ++ L+ A + A G +I ++M+ G D Y Y +AG
Sbjct: 334 LQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQ-HMGCEPDRASYNIMVDAYGRAG 392
Query: 273 LSDKALAVLR-----------KSEVLMMHNKFSRA-----YDFVITQYAACGNKDDVLRV 316
L + A AV KS +L++ + +SRA + ++ Q G K D
Sbjct: 393 LHEDAQAVFEVMKRLGITPTMKSHMLLL-SAYSRAGKVAKCEEIVNQMHKSGIKPDTF-- 449
Query: 317 WKRYKQNLKVYNRGYICVISSLLKFDG----MESAEKIFEEWESRNLCHDIRIPNHLIDA 372
V++S+L G E E++ E DI N LI+
Sbjct: 450 -----------------VLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINI 492
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAG 431
Y R G + E L R P+V TW Y + Q + +E ++ +++AG
Sbjct: 493 YGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEE---MIDAG 548
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 110/270 (40%), Gaps = 21/270 (7%)
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
I YN +++ Y Q YKK +S E+ E + T+++LL A + E + + A
Sbjct: 168 VICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFA 227
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
M G VY G +K G + KA+ + + + + Y +I Y
Sbjct: 228 EMR-KYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPS-TATYTMLINLYGK 285
Query: 307 CGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKF---DGM-ESAEKIFEEWESRNLCHD 362
L+V+ + N IC ++L+ +G+ E AE+IFE+ + L D
Sbjct: 286 ASKSYMALKVFHEMRSQKCKPN---ICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPD 342
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG----- 417
+ N L++AY R G + A + Q G EP+ ++ +M Y + E
Sbjct: 343 VYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFE 402
Query: 418 -------VEAMKKALVLLEAGTRWKPSKEC 440
MK ++LL A +R +C
Sbjct: 403 VMKRLGITPTMKSHMLLLSAYSRAGKVAKC 432
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/347 (19%), Positives = 141/347 (40%), Gaps = 17/347 (4%)
Query: 92 KFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYF------NCV 145
+ RL K++ + I W+ +S+F + +D + ++A S + CV
Sbjct: 141 QLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCV 200
Query: 146 PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
P + Y LL AY + EKAE + +MR G + YN+ ++ + G+ +K
Sbjct: 201 PTE----DTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQK 256
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAA 265
+ M+ T+++L++ AS K+ M + + + +
Sbjct: 257 AVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQK-CKPNICTFTALV 315
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK 325
+ + + GL +KA + + + + AY+ ++ Y+ G ++ +
Sbjct: 316 NAFAREGLCEKAEEIFEQLQEAGLEPDVY-AYNALMEAYSRAGFPYGAAEIFSLMQHMGC 374
Query: 326 VYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
+R Y ++ + + E A+ +FE + + ++ L+ AY R G + K E
Sbjct: 375 EPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEE 434
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAG 431
++ + G +P+ M Y + Q EK M++ L +E G
Sbjct: 435 IVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEK----MEEVLTAMEKG 477
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 78/166 (46%), Gaps = 3/166 (1%)
Query: 120 ADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQ 177
A I +D + E A + F + P++ ++ LL+AY+ A K E I+ Q
Sbjct: 379 ASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQ 438
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
M G+ T NSM+N+Y + G ++K++ ++ ME+ D T++IL++ A
Sbjct: 439 MHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGF 498
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
++++ + A R ++ D + + Y + ++ L V +
Sbjct: 499 FARMEELFRSLPA-RNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEE 543
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y L+N Y A + E + + + R L+ + + S + Y + Y + + E
Sbjct: 484 STYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEE 543
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
M + G D T +LLSAC+ + + ++ M D
Sbjct: 544 MIDAGCYPDGGTAKVLLSACSNGDQIQEVTTVIRTMHKD 582
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 115/264 (43%), Gaps = 38/264 (14%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y L++AY ++ E A + +M + LV + Y +MN ++G ++ S+
Sbjct: 85 PNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSV 144
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
EMEE G+ ++++++ L+ + + + M RG+ D VY G
Sbjct: 145 FREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVV-RGIGFDVVVYTALMDGLF 203
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
KAG+++ N +D+ +V +++L
Sbjct: 204 KAGMAN---------------------------------NAEDMFQVL--LEESLVPNCV 228
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +I K + E + +E E +++ ++ + + ++D Y ++GLL++A ++ K
Sbjct: 229 TYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKM 288
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQ 413
R PNV + + GY + +Q
Sbjct: 289 VQRNILPNVFVYGTLIDGYFKADQ 312
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 128/285 (44%), Gaps = 15/285 (5%)
Query: 146 PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
PE + + L++ Y +A +++ M+ G + YN++MN + + G+
Sbjct: 11 PEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFT 70
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAA 265
LM E+ ++ + T++ L+ A + E + M + +V D Y
Sbjct: 71 AKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTV-KSLVPDVVTYTCIM 129
Query: 266 SGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
+G K+G ++A +V R+ EV ++ N+FS Y +I GN + + R +
Sbjct: 130 NGLCKSGKVEEAKSVFREMEEVGVVPNRFS--YATLIDSLFKEGNVAEAFVLQGR----M 183
Query: 325 KVYNRGYICVISSLLKFDGM------ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
V G+ V+ + L DG+ +AE +F+ +L + + LID +C+ G
Sbjct: 184 VVRGIGFDVVVYTAL-MDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGD 242
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
++K E L+ + + + PNV + + GY + + ++ M+K
Sbjct: 243 VNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRK 287
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 94/238 (39%), Gaps = 36/238 (15%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
++E MR GL + +N+M+N Y + GN L++EM+ G+ + T +IL+
Sbjct: 419 ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILV 478
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
AA + I+K + ++ D V + + D + R +L M
Sbjct: 479 QRLCAAGE---IEKTMDLLN-------DMLVMGFHPTPTTHKAVLDASSKSRRADVILHM 528
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEK 349
H++ V K +L YN +IS+ + + A
Sbjct: 529 HDQL----------------------VGMGVKLDLSTYN----TLISTFCRLGMIRRATL 562
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+F++ + + DI N LI YC L KA + + G PNV T+ ++ G
Sbjct: 563 VFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGG 620
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 134/335 (40%), Gaps = 44/335 (13%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY AL++ A A AE + Q + + LV + Y+++++ + + G+ K + L+ EM
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA- 271
EEK I + +S ++ E +D + M++ R ++ + VY T GY KA
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQ--RNILPNVFVYGTLIDGYFKAD 311
Query: 272 ---------------GLSDKALAV------LRKSEVL-----MMHNKFSRA-------YD 298
GL + + L++S + + + SR Y
Sbjct: 312 QRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYT 371
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESR 357
++ + G + D + + + ++ Y +I+ L K ES E
Sbjct: 372 SMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES-ESFHTGMRQL 430
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
L D N +I+AYC+ G L A L+ + + G +PN T ++ + EK
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKT 490
Query: 418 VEAMKKALVLLEAGTRWKPSKECLAACLGYYKKER 452
++ + LV+ + P+ A L K R
Sbjct: 491 MDLLNDMLVM-----GFHPTPTTHKAVLDASSKSR 520
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y L++ + +A ++ + M +G++ I YN++++ Y + + KK ++ +
Sbjct: 542 STYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQ 601
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M +G+ + T++ILL +AA + +V M+ +RG+V + T Y SG+ K G
Sbjct: 602 MLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMK-ERGLVPNATTYDILVSGHGKIG 660
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y LL + A+ ++A ++ QM++RGLV Y+ +++ + + GN K+ L
Sbjct: 609 PNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKL 668
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
EM KG T+++L+S A +++ M+ RG+ + + Y G+
Sbjct: 669 YCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQV-RGIPPNSSTYDILICGWY 727
Query: 270 K 270
K
Sbjct: 728 K 728
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/274 (17%), Positives = 116/274 (42%), Gaps = 38/274 (13%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P+ + A+L+A + ++ A+ + Q+ G+ YN++++ + + G ++ +
Sbjct: 506 PTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFK 565
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
+M KGI D T++ L+ +S + + + M + GV + Y G A
Sbjct: 566 DMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTE-GVSPNVETYNILLGGLSAA 624
Query: 272 GLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG 330
L +A ++ + E ++ N + YD +++ + GN
Sbjct: 625 RLIKEAAGLVNQMKERGLVPN--ATTYDILVSGHGKIGN--------------------- 661
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
M+ K++ E ++ R N LI + + + +A+ L+ + Q
Sbjct: 662 -------------MKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQ 708
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
+RG PN T+ ++ G+ + ++ + +++K++
Sbjct: 709 VRGIPPNSSTYDILICGWYKLSKQPELNKSLKRS 742
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 117/277 (42%), Gaps = 22/277 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY L+ YA E+A ++ M G+ YN++++ + G ++ + + E+
Sbjct: 386 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 445
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--------DRGVVLDWTVYATAA 265
+ +G+ D TF + G K M EA D G++ + +Y
Sbjct: 446 QGRGLKPDAVTFGAFIL---------GYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLI 496
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK 325
+G+ KAG +AL++ R L + F I G + L+V+ K+
Sbjct: 497 NGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF-IHGLLKNGRVQEALKVFSELKEKGL 555
Query: 326 VYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
V + Y +IS K +E A ++ +E + + +I I N L+D C+ G + +A
Sbjct: 556 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARK 615
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
L +G EP+ T+ M GY +SE EA
Sbjct: 616 LFDGMPEKGLEPDSVTYSTMIDGYC---KSENVAEAF 649
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 122/292 (41%), Gaps = 24/292 (8%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
N VP + Y A++N K A ++++M GL + Y++++ Y G
Sbjct: 344 NLVPSAVS----YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGR 399
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
++ L+ M G+ D + ++ ++S + A E + ++ RG+ D +
Sbjct: 400 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG-RGLKPDAVTFG 458
Query: 263 TAASGYVKAGLSDKALAVLRK--SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
GY K G +A + LM +N Y +I + GN + L ++ R+
Sbjct: 459 AFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL---YTVLINGHFKAGNLMEALSIF-RH 514
Query: 321 KQNLKVYNRGYIC--VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
L V C I LLK ++ A K+F E + + L D+ + LI +C++G
Sbjct: 515 LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 574
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGY-----------LQNNQSEKGVE 419
+ KA L + L+G PN+ + + G L + EKG+E
Sbjct: 575 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 626
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 128/294 (43%), Gaps = 15/294 (5%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+++A F+ + EK +P V Y +L++ + EKA + +M +G+ YN+
Sbjct: 540 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 599
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEAD 251
+++ ++G+ ++ L M EKG++ D T+S ++ C + + E M
Sbjct: 600 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM--PS 657
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF--VITQYA-ACG 308
+GV VY G K G +KA+ + R+ M+ F+ F +I Y +C
Sbjct: 658 KGVQPHSFVYNALVHGCCKEGDMEKAMNLFRE----MLQKGFATTLSFNTLIDGYCKSCK 713
Query: 309 NKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
++ + + + + Y VI K ME A +F+E + RNL D
Sbjct: 714 IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTS 773
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
L+ Y + G + L K +G +P+ T+ L+ + + + VEA K
Sbjct: 774 LMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNL---VEAFK 824
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 134/304 (44%), Gaps = 12/304 (3%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSA--EKAEIIMQQMRDRGL 183
+D K + + +A S F+ +P K P ++ + C K EKA + ++M +G
Sbjct: 636 IDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF 695
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
T+ +N++++ Y ++ ++ L EM K I D T++ ++ A E +
Sbjct: 696 A-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 754
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ 303
+ M+ +R +++D Y + GY K G S + A+ K V Y VI
Sbjct: 755 LFKEMQ-ERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKM-VAKGVKPDEVTYGLVI-- 810
Query: 304 YAACGNKDDVLRVWKRYKQNL--KVYNRGYI--CVISSLLKFDGMESAEKIFEEWESRNL 359
YA C +D+++ +K + + + +G I +I++L K + + A K+ +E L
Sbjct: 811 YAHC-KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGL 869
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+ + L+ ++ G + +A + + G P+ T + G L + SE
Sbjct: 870 KPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARN 929
Query: 420 AMKK 423
+K+
Sbjct: 930 LIKQ 933
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/302 (18%), Positives = 122/302 (40%), Gaps = 38/302 (12%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+ ++K +E+A++Y + + P + A + Y+ +A +M D GL
Sbjct: 426 ISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGL 485
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ Y ++N +++ GN + S+ + G+ D T S + + K
Sbjct: 486 MPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALK 545
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ 303
+ + ++ ++G+V D Y++ SG+ K G +KA +H++
Sbjct: 546 VFSELK-EKGLVPDVFTYSSLISGFCKQGEVEKAFE---------LHDEM---------- 585
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
K N+ +YN ++ L K ++ A K+F+ + L D
Sbjct: 586 ------------CLKGIAPNIFIYN----ALVDGLCKSGDIQRARKLFDGMPEKGLEPDS 629
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ +ID YC+ + +A +L ++ +G +P+ + + G + EK + ++
Sbjct: 630 VTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFRE 689
Query: 424 AL 425
L
Sbjct: 690 ML 691
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 122/312 (39%), Gaps = 49/312 (15%)
Query: 195 NVYYQTGNYKKLDSL-----MHEMEEKGIDCDKYTFSILLS------------------- 230
NV++ N L SL + M EKG+ + YT++I+ +
Sbjct: 177 NVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQ 236
Query: 231 ---------ACAAASDG---EG-IDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSD 275
AC+A DG EG ID+++ + + G+ ++ Y G K G +
Sbjct: 237 KTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKME 296
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYICV 334
KA +L K + + SR + +I Y N L + K+NL Y +
Sbjct: 297 KAAEIL-KGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAM 355
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I+ L + A K+ E+ L ++ + + LI Y G + +A L+ G
Sbjct: 356 INGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGV 415
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE-AGTRWKPSKECLAA-CLGYYKKER 452
P++ + + + + + E+ + LLE G KP A LGY K +
Sbjct: 416 APDIFCYNAIISCLSKAGKMEEA------STYLLEIQGRGLKPDAVTFGAFILGYSKTGK 469
Query: 453 DIEGADYFIKLL 464
E A YF ++L
Sbjct: 470 MTEAAKYFDEML 481
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 115/264 (43%), Gaps = 38/264 (14%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y L++AY ++ E A + +M + LV + Y +MN ++G ++ S+
Sbjct: 85 PNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSV 144
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
EMEE G+ ++++++ L+ + + + M RG+ D VY G
Sbjct: 145 FREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVV-RGIGFDVVVYTALMDGLF 203
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
KAG+++ N +D+ +V +++L
Sbjct: 204 KAGMAN---------------------------------NAEDMFQVL--LEESLVPNCV 228
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +I K + E + +E E +++ ++ + + ++D Y ++GLL++A ++ K
Sbjct: 229 TYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKM 288
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQ 413
R PNV + + GY + +Q
Sbjct: 289 VQRNILPNVFVYGTLIDGYFKADQ 312
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 128/285 (44%), Gaps = 15/285 (5%)
Query: 146 PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
PE + + L++ Y +A +++ M+ G + YN++MN + + G+
Sbjct: 11 PEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFT 70
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAA 265
LM E+ ++ + T++ L+ A + E + M + +V D Y
Sbjct: 71 AKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTV-KSLVPDVVTYTCIM 129
Query: 266 SGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
+G K+G ++A +V R+ EV ++ N+FS Y +I GN + + R +
Sbjct: 130 NGLCKSGKVEEAKSVFREMEEVGVVPNRFS--YATLIDSLFKEGNVAEAFVLQGR----M 183
Query: 325 KVYNRGYICVISSLLKFDGM------ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
V G+ V+ + L DG+ +AE +F+ +L + + LID +C+ G
Sbjct: 184 VVRGIGFDVVVYTAL-MDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGD 242
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
++K E L+ + + + PNV + + GY + + ++ M+K
Sbjct: 243 VNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRK 287
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 94/238 (39%), Gaps = 36/238 (15%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
++E MR GL + +N+M+N Y + GN L++EM+ G+ + T +IL+
Sbjct: 419 ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILV 478
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
AA + I+K + ++ D V + + D + R +L M
Sbjct: 479 QRLCAAGE---IEKTMDLLN-------DMLVMGFHPTPTTHKAVLDASSKSRRADVILHM 528
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEK 349
H++ V K +L YN +IS+ + + A
Sbjct: 529 HDQL----------------------VGMGVKLDLSTYNT----LISTFCRLGMIRRATL 562
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+F++ + + DI N LI YC L KA + + G PNV T+ ++ G
Sbjct: 563 VFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGG 620
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 134/335 (40%), Gaps = 44/335 (13%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY AL++ A A AE + Q + + LV + Y+++++ + + G+ K + L+ EM
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253
Query: 214 EEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA- 271
EEK I + +S ++ E +D + M++ R ++ + VY T GY KA
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQ--RNILPNVFVYGTLIDGYFKAD 311
Query: 272 ---------------GLSDKALAV------LRKSEVL-----MMHNKFSRA-------YD 298
GL + + L++S + + + SR Y
Sbjct: 312 QRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYT 371
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESR 357
++ + G + D + + + ++ Y +I+ L K ES E
Sbjct: 372 SMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES-ESFHTGMRQL 430
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
L D N +I+AYC+ G L A L+ + + G +PN T ++ + EK
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKT 490
Query: 418 VEAMKKALVLLEAGTRWKPSKECLAACLGYYKKER 452
++ + LV+ + P+ A L K R
Sbjct: 491 MDLLNDMLVM-----GFHPTPTTHKAVLDASSKSR 520
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y L++ + +A ++ + M +G++ I YN++++ Y + + KK ++ +
Sbjct: 542 STYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQ 601
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M +G+ + T++ILL +AA + +V M+ +RG+V + T Y SG+ K G
Sbjct: 602 MLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMK-ERGLVPNATTYDILVSGHGKIG 660
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y LL + A+ ++A ++ QM++RGLV Y+ +++ + + GN K+ L
Sbjct: 609 PNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKL 668
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
EM KG T+++L+S A +++ M+ RG+ + + Y G+
Sbjct: 669 YCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQV-RGIPPNSSTYDILICGWY 727
Query: 270 K 270
K
Sbjct: 728 K 728
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/258 (18%), Positives = 106/258 (41%), Gaps = 38/258 (14%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P+ + A+L+A + ++ A+ + Q+ G+ YN++++ + + G ++ +
Sbjct: 506 PTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFK 565
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
+M KGI D T++ L+ +S + + + M + GV + Y G A
Sbjct: 566 DMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTE-GVSPNVETYNILLGGLSAA 624
Query: 272 GLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG 330
L +A ++ + E ++ N + YD +++ + GN
Sbjct: 625 RLIKEAAGLVNQMKERGLVPN--ATTYDILVSGHGKIGN--------------------- 661
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
M+ K++ E ++ R N LI + + + +A+ L+ + Q
Sbjct: 662 -------------MKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQ 708
Query: 391 LRGTEPNVRTWYLMATGY 408
+RG PN T+ ++ G+
Sbjct: 709 VRGIPPNSSTYDILICGW 726
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 124/295 (42%), Gaps = 36/295 (12%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y L+N Y A + A + +MR + + +++N + + G +K + + +
Sbjct: 312 ATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQ 371
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
++E G++ D Y ++ L+ A + A G +I ++M+ G D Y Y +AG
Sbjct: 372 LQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQ-HMGCEPDRASYNIMVDAYGRAG 430
Query: 273 LSDKALAVLR-----------KSEVLMMHNKFSRA-----YDFVITQYAACGNKDDVLRV 316
L + A AV KS +L++ + +SRA + ++ Q G K D +
Sbjct: 431 LHEDAQAVFEVMKRLGITPTMKSHMLLL-SAYSRAGKVAKCEEIVNQMHKSGIKPDTFVL 489
Query: 317 WKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRR 376
L +Y R L +F+ ME ++ E DI N LI+ Y R
Sbjct: 490 ----NSMLNLYGR--------LGQFEKME---EVLTAMEKGPYPADISTYNILINIYGRA 534
Query: 377 GLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAG 431
G + E L R P+V TW Y + Q + +E ++ +++AG
Sbjct: 535 GFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEE---MIDAG 586
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 110/270 (40%), Gaps = 21/270 (7%)
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
I YN +++ Y Q YKK +S E+ E + T+++LL A + E + + A
Sbjct: 206 VICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFA 265
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
M G VY G +K G + KA+ + + + + Y +I Y
Sbjct: 266 EMR-KYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPS-TATYTMLINLYGK 323
Query: 307 CGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKF---DGM-ESAEKIFEEWESRNLCHD 362
L+V+ + N IC ++L+ +G+ E AE+IFE+ + L D
Sbjct: 324 ASKSYMALKVFHEMRSQKCKPN---ICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPD 380
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG----- 417
+ N L++AY R G + A + Q G EP+ ++ +M Y + E
Sbjct: 381 VYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFE 440
Query: 418 -------VEAMKKALVLLEAGTRWKPSKEC 440
MK ++LL A +R +C
Sbjct: 441 VMKRLGITPTMKSHMLLLSAYSRAGKVAKC 470
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/347 (19%), Positives = 141/347 (40%), Gaps = 17/347 (4%)
Query: 92 KFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYF------NCV 145
+ RL K++ + I W+ +S+F + +D + ++A S + CV
Sbjct: 179 QLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCV 238
Query: 146 PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
P + Y LL AY + EKAE + +MR G + YN+ ++ + G+ +K
Sbjct: 239 PTE----DTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQK 294
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAA 265
+ M+ T+++L++ AS K+ M + + + +
Sbjct: 295 AVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQK-CKPNICTFTALV 353
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK 325
+ + + GL +KA + + + + AY+ ++ Y+ G ++ +
Sbjct: 354 NAFAREGLCEKAEEIFEQLQEAGLEPDVY-AYNALMEAYSRAGFPYGAAEIFSLMQHMGC 412
Query: 326 VYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
+R Y ++ + + E A+ +FE + + ++ L+ AY R G + K E
Sbjct: 413 EPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEE 472
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAG 431
++ + G +P+ M Y + Q EK M++ L +E G
Sbjct: 473 IVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEK----MEEVLTAMEKG 515
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 78/166 (46%), Gaps = 3/166 (1%)
Query: 120 ADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQ 177
A I +D + E A + F + P++ ++ LL+AY+ A K E I+ Q
Sbjct: 417 ASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQ 476
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
M G+ T NSM+N+Y + G ++K++ ++ ME+ D T++IL++ A
Sbjct: 477 MHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGF 536
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
++++ + A R ++ D + + Y + ++ L V +
Sbjct: 537 FARMEELFRSLPA-RNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEE 581
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y L+N Y A + E + + + R L+ + + S + Y + Y + + E
Sbjct: 522 STYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEE 581
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
M + G D T +LLSAC+ + + ++ M D
Sbjct: 582 MIDAGCYPDGGTAKVLLSACSNGDQIQEVTTVIRTMHKD 620
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 115/264 (43%), Gaps = 38/264 (14%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y L++AY ++ E A + +M + LV + Y +MN ++G ++ S+
Sbjct: 85 PNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSV 144
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
EMEE G+ ++++++ L+ + + + M RG+ D VY G
Sbjct: 145 FREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVV-RGIGFDVVVYTALMDGLF 203
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
KAG+++ N +D+ +V +++L
Sbjct: 204 KAGMAN---------------------------------NAEDMFQVL--LEESLVPNCV 228
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +I K + E + +E E +++ ++ + + ++D Y ++GLL++A ++ K
Sbjct: 229 TYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKM 288
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQ 413
R PNV + + GY + +Q
Sbjct: 289 VQRNILPNVFVYGTLIDGYFKADQ 312
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 128/285 (44%), Gaps = 15/285 (5%)
Query: 146 PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
PE + + L++ Y +A +++ M+ G + YN++MN + + G+
Sbjct: 11 PEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFT 70
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAA 265
LM E+ ++ + T++ L+ A + E + M + +V D Y
Sbjct: 71 AKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTV-KSLVPDVVTYTCIM 129
Query: 266 SGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
+G K+G ++A +V R+ EV ++ N+FS Y +I GN + + R +
Sbjct: 130 NGLCKSGKVEEAKSVFREMEEVGVVPNRFS--YATLIDSLFKEGNVAEAFVLQGR----M 183
Query: 325 KVYNRGYICVISSLLKFDGM------ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
V G+ V+ + L DG+ +AE +F+ +L + + LID +C+ G
Sbjct: 184 VVRGIGFDVVVYTAL-MDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGD 242
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
++K E L+ + + + PNV + + GY + + ++ M+K
Sbjct: 243 VNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRK 287
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 134/335 (40%), Gaps = 44/335 (13%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY AL++ A A AE + Q + + LV + Y+++++ + + G+ K + L+ EM
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253
Query: 214 EEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA- 271
EEK I + +S ++ E +D + M++ R ++ + VY T GY KA
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQ--RNILPNVFVYGTLIDGYFKAD 311
Query: 272 ---------------GLSDKALAV------LRKSEVL-----MMHNKFSRA-------YD 298
GL + + L++S + + + SR Y
Sbjct: 312 QRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYT 371
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESR 357
++ + G + D + + + ++ Y +I+ L K ES E
Sbjct: 372 SMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES-ESFHTGMRQL 430
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
L D N +I+AYC+ G L A L+ + + G +PN T ++ + EK
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKT 490
Query: 418 VEAMKKALVLLEAGTRWKPSKECLAACLGYYKKER 452
++ + LV+ + P+ A L K R
Sbjct: 491 MDLLNDMLVM-----GFHPTPTTHKAVLDASSKSR 520
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 36/238 (15%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
++E MR GL + +N+M+N Y + GN L++EM+ G+ + T +IL+
Sbjct: 419 ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILV 478
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
AA + I+K + ++ D V + + D + R +L
Sbjct: 479 QRLCAAGE---IEKTMDLLN-------DMLVMGFHPTPTTHKAVLDASSKSRRADVILHX 528
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEK 349
H++ V K +L YN +IS+ + + A
Sbjct: 529 HDQL----------------------VGMGVKLDLSTYNT----LISTFCRLGMIRRATL 562
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+F++ + + DI N LI YC L KA + + G PNV T+ ++ G
Sbjct: 563 VFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGG 620
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y L++ + +A ++ + M +G++ I YN++++ Y + + KK ++ +
Sbjct: 542 STYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQ 601
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M +G+ + T++ILL +AA + +V M+ +RG+V + T Y SG+ K G
Sbjct: 602 MLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMK-ERGLVPNATTYDILVSGHGKIG 660
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y LL + A+ ++A ++ QM++RGLV Y+ +++ + + GN K+ L
Sbjct: 609 PNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKL 668
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
EM KG T+++L+S A +++ M+ RG+ + + Y G+
Sbjct: 669 YCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQV-RGIPPNSSTYDILICGWY 727
Query: 270 K 270
K
Sbjct: 728 K 728
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/277 (18%), Positives = 118/277 (42%), Gaps = 44/277 (15%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQ---QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
P+ + A+L+A + + +A++I+ Q+ G+ YN++++ + + G ++
Sbjct: 506 PTTHKAVLDA---SSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATL 562
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ +M KGI D T++ L+ +S + + + M + GV + Y G
Sbjct: 563 VFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTE-GVSPNVETYNILLGGL 621
Query: 269 VKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
A L +A ++ + E ++ N + YD +++ + GN
Sbjct: 622 SAARLIKEAAGLVNQMKERGLVPN--ATTYDILVSGHGKIGN------------------ 661
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
M+ K++ E ++ R N LI + + + +A+ L+
Sbjct: 662 ----------------MKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQ 705
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
+ Q+RG PN T+ ++ G+ + ++ + +++K++
Sbjct: 706 EMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRS 742
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 160/379 (42%), Gaps = 52/379 (13%)
Query: 72 DQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTP--ADVAIRLDLI 129
D E G ++ + I+I + ++ A I M K V +P A +D +
Sbjct: 294 DAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYK---VCSPDGATFCSLIDGL 350
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSV--YIALL-NAYACAKSAEKAEIIMQQMRDRGLVKK 186
K ++ A + + + ++P+V Y +L+ N + C + + ++ + MR G
Sbjct: 351 GKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRS-GCSPD 409
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ N+ M+ ++ G +K +L E++ +G D ++SIL+ + A ++
Sbjct: 410 LMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYY 469
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
M+ D+G VLD Y T G+ K+G +KA +L + + + H V+T
Sbjct: 470 AMK-DQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPT-------VVT---- 517
Query: 307 CGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
Y V+ L K D ++ A +FEE +S + + I
Sbjct: 518 ------------------------YGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIY 553
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
+ LID + + G + +A ++ + +G PNV TW + G ++ E + +ALV
Sbjct: 554 SSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVK-------AEEINEALV 606
Query: 427 LLEAGTRWKPSKECLAACL 445
++ K + + C+
Sbjct: 607 CFQSMKDLKCTPNQITYCI 625
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 102/238 (42%), Gaps = 10/238 (4%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
++ +M+ + YN ++ + + G HEM+ G+ D T++ ++
Sbjct: 118 LLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLC 177
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF 293
A+ + +I ME +R V + Y T GY AG D+A ++L +
Sbjct: 178 KANRLDEAVEIFEQMEQNRQVPCAYA-YNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSV 236
Query: 294 SRAYDFVITQYAACGNKDDVLRVWKRYKQ----NLKVYNRGYICVISSLLKFDGMESAEK 349
AY+ ++T G D LR+++ K+ NL YN +I L K +E+A K
Sbjct: 237 V-AYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYN----IIIGMLCKAGNVEAAFK 291
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+ + + L ++R N +ID C+ L +A ++ + P+ T+ + G
Sbjct: 292 VRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDG 349
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 155/397 (39%), Gaps = 47/397 (11%)
Query: 48 SSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISM 107
S+ L LS +G+ +D M+ L +Q E G +++ L +I+ F R AL S+
Sbjct: 62 SAYTTLIGALSEVGE-SDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAAL--SL 118
Query: 108 WMTKKSNFVLTPADVA---IRLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAY 162
KSN AD+ + +D KV ++ A +F+ + +P Y +++
Sbjct: 119 LDEMKSNTF--DADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVL 176
Query: 163 ACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDK 222
A ++A I +QM V YN+M+ Y G + + SL+ KG
Sbjct: 177 CKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSV 236
Query: 223 YTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV-- 280
++ +L+ + +I M+ R + + Y KAG + A V
Sbjct: 237 VAYNCILTCLGKKGKTDKALRIFEEMK--RDAMPNLPTYNIIIGMLCKAGNVEAAFKVRD 294
Query: 281 -LRKSEVL-------MMHNKFSRAYD-------FVITQYAAC-----------------G 308
++++ + +M ++ +A F Y C G
Sbjct: 295 AMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQG 354
Query: 309 NKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
DD R+++R ++ N Y +I + K D E K+++E D+ + N
Sbjct: 355 RVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLN 414
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
+D + G K L + + RG P+ R++ ++
Sbjct: 415 TYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSIL 451
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 126 LDLIAKVQGIEQAASYFN------CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMR 179
LD + K + I +A F C P ++ Y L+N + KA + Q+M+
Sbjct: 592 LDGLVKAEEINEALVCFQSMKDLKCTPNQI----TYCILINGLCKVRKFNKAFVFWQEMQ 647
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
+GL TI Y +M++ ++GN + SL G D +++ ++ + A+
Sbjct: 648 KQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIAN 704
>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Vitis vinifera]
Length = 1545
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 124/273 (45%), Gaps = 21/273 (7%)
Query: 157 ALLNAYACAKSAEKAEIIMQQM--RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
++L YA A + M RDR + +NS++ Y Q G +K L +M+
Sbjct: 225 SILAVYAKCGRLSCARRFFENMDYRDR------VSWNSIITGYCQKGELEKSHQLFEKMQ 278
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
E+GI+ T++IL+++ + + + +++ ME+ R +V D + + SG+ +
Sbjct: 279 EEGIEPGLVTWNILINSYSQSGKCDDAMELMKKMESFR-IVPDVFTWTSMISGFAQNNRR 337
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
+AL + R+ M+ V + +AC + + + + + +K+ + V
Sbjct: 338 SQALELFRE----MLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLV 393
Query: 335 ISSLL----KFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
+SL+ K +E A ++F+ L D+ N +I YC+ G KA L K
Sbjct: 394 GNSLIDMYSKSGELEDARRVFD----MILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMH 449
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
PNV TW M +GY+QN ++ ++ +
Sbjct: 450 ESDVPPNVVTWNAMISGYIQNGDEDQAMDLFHR 482
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 116/276 (42%), Gaps = 46/276 (16%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P V L++ YA S +A + +MR+R L +++M+ Y + ++++
Sbjct: 119 PFVETKLVSMYAKCGSLGEARKVFGEMRERNLYA----WSAMIGAYSREQMWREVVQHFF 174
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
M E GI D++ +L AC D E I +++ ++
Sbjct: 175 FMMEDGIVPDEFLLPKILQACGNCGDAETGKLIHSLV--------------------IRC 214
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-G 330
G+ N R + ++ YA CG L +R+ +N+ +R
Sbjct: 215 GM-----------------NFNIRVSNSILAVYAKCGR----LSCARRFFENMDYRDRVS 253
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
+ +I+ + +E + ++FE+ + + + N LI++Y + G A L+ K +
Sbjct: 254 WNSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQSGKCDDAMELMKKME 313
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
P+V TW M +G+ QNN+ + +E ++ L+
Sbjct: 314 SFRIVPDVFTWTSMISGFAQNNRRSQALELFREMLL 349
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 144/354 (40%), Gaps = 36/354 (10%)
Query: 83 MEQLRII---------IKKFRLYKRFSHALQISMWM---TKKSNFVLTPADVAIRLDLIA 130
ME RI+ I F R S AL++ M + N V + ++ L A
Sbjct: 312 MESFRIVPDVFTWTSMISGFAQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKA 371
Query: 131 KVQGIE--QAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
+G+E A CV + L V +L++ Y+ + E A +++ D L K
Sbjct: 372 LKKGMELHSVAVKIGCVEDLL----VGNSLIDMYSKSGELEDA----RRVFDMILKKDVY 423
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMM 248
+NSM+ Y Q G K L +M E + + T++ ++S D + + M
Sbjct: 424 TWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISGYIQNGDEDQAMDLFHRM 483
Query: 249 EADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH-NKFSRAYDFVITQYAAC 307
E D + D + + +GY++ G +KAL + R+ + + N + +++ AC
Sbjct: 484 EKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNSVT-----MLSILPAC 538
Query: 308 GNKDDVLRVWKRY----KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
N +V + + ++NL C+I + K + A+ IF+ S+ DI
Sbjct: 539 ANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQGISSK----DI 594
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
N LI Y G A L + G +P+ T+ + + + +KG
Sbjct: 595 ISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSGMVDKG 648
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 129/322 (40%), Gaps = 25/322 (7%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
L+N+Y+ + + A +M++M +V + SM++ + Q + L EM G
Sbjct: 292 LINSYSQSGKCDDAMELMKKMESFRIVPDVFTWTSMISGFAQNNRRSQALELFREMLLAG 351
Query: 218 IDCDKYTFSILLSACA---AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
I+ + T + +SACA A G + + + G V D V + Y K+G
Sbjct: 352 IEPNGVTVTSGISACASLKALKKGMELHSVAVKI----GCVEDLLVGNSLIDMYSKSGEL 407
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAA---CGNKDDVLRVWKRYKQNLKVYNRGY 331
+ A V M+ K ++ +I Y CG D+ K ++ ++ +
Sbjct: 408 EDARRVFD-----MILKKDVYTWNSMIGGYCQAGYCGKAYDLF--IKMHESDVPPNVVTW 460
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLC-HDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
+IS ++ + A +F E L D N LI Y + G +KA + + Q
Sbjct: 461 NAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQ 520
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACL-GYYK 449
PN T L N + K V+ + ++ G S+ +A CL Y
Sbjct: 521 SFCIRPNSVT-MLSILPACANLVAAKKVKEIHGCILRRNLG-----SELSVANCLIDTYA 574
Query: 450 KERDIEGADYFIKLLTGKEIIS 471
K +I A + ++ K+IIS
Sbjct: 575 KSGNIVYAQTIFQGISSKDIIS 596
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 108/249 (43%), Gaps = 3/249 (1%)
Query: 176 QQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAA 235
++M++ G+ YN +MN + G K + EM E+G+ C+ T++ L+
Sbjct: 257 EKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 236 SDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR 295
++++ M++D G+ + Y T G+ KAL++ R + +
Sbjct: 317 MKANEANEVMDQMKSD-GINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLV- 374
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
Y+ +++ + G+ +V K ++ +K Y +I + + D ME A ++
Sbjct: 375 TYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSM 434
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
E L D+ + LI +C +G +++A L + EPN + M GY + S
Sbjct: 435 EELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSS 494
Query: 415 EKGVEAMKK 423
+ + ++
Sbjct: 495 YRALRLFRE 503
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 129/281 (45%), Gaps = 23/281 (8%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y ++NAY ++S + + +M D+G V + +N+++ + ++ + +E
Sbjct: 96 LYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES 155
Query: 214 EEKGIDCDKYTFSILLSACAAASDGE-GIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ K + D Y+F I++ C A + E D +V + E G + +Y T G K G
Sbjct: 156 KIK-VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREF--GFSPNVVIYTTLIDGCCKKG 212
Query: 273 LSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKV 326
+KA + + + ++ N+++ Y +I G K ++++ ++ NL
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWT--YTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHT 270
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
YN CV++ L K + A K+F+E R + +I N LI CR ++A ++
Sbjct: 271 YN----CVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVM 326
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVL 427
+ + G PN+ T+ + G+ GV + KAL L
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFC-------GVRKLGKALSL 360
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 106/249 (42%), Gaps = 11/249 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+ A +A +M QM+ G+ I YN++++ + K SL ++
Sbjct: 305 TYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDL 364
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ +G+ T++IL+S D G K+V ME +RG+ Y + ++
Sbjct: 365 KSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME-ERGIKPSKVTYTILIDTFARSDN 423
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVYN 328
+KA+ + E L + Y +I + G ++ R++ K+++ N +YN
Sbjct: 424 MEKAIQLRSSMEELGLTPDV-HTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYN 482
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
++ K A ++F E E + L ++ ++I+ C+ +AE L+ K
Sbjct: 483 T----MVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEK 538
Query: 389 AQLRGTEPN 397
G P+
Sbjct: 539 MIDSGIGPS 547
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 133/310 (42%), Gaps = 15/310 (4%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I +D + K + +A S F+ + E LP V + +L++ Y ++ E ++++MR
Sbjct: 193 IVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRS 252
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEG 240
G + YN+++N + + G + M+ +G+ + TFS + A C E
Sbjct: 253 GCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREA 312
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
+ K+ A M RG+ L+ Y G KAG D A+ +L + ++ +
Sbjct: 313 M-KLFAQMRV-RGMALNEFTYTCLIDGTCKAGRLDDAIVLLDE---MVRQGVPLNVVTYT 367
Query: 301 ITQYAACGNK-----DDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
+ C + +DVLR+ + K ++ Y +I E A + E +
Sbjct: 368 VLVDGLCKERKVAEAEDVLRMME--KAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
++ L DI + LI C L +A++L+ K G EPN + M ++ +
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485
Query: 416 KGVEAMKKAL 425
+ + ++K L
Sbjct: 486 EAIAMLQKIL 495
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 137/340 (40%), Gaps = 38/340 (11%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTK------------- 111
D + LLD+ V +G PL++ +++ ++ + A + M K
Sbjct: 345 DDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTL 404
Query: 112 -KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEK 170
+F+ ++ A+ L K +G+E S +Y AL+ ++
Sbjct: 405 IHGHFMNKNSEKALGLLSEMKNKGLELDIS-------------LYGALIQGLCNVHKLDE 451
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS 230
A+ ++ +M + GL I Y +MM+ +++G + +++ ++ + G + T+ L+
Sbjct: 452 AKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALID 511
Query: 231 A-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
C A S E I M D G+ + Y G K G ++A+ + + M+
Sbjct: 512 GLCKAGSIDEAISHFNKM--RDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNE----MV 565
Query: 290 HNKFSR---AYDFVITQYAACGNKDDVLRV-WKRYKQNLKVYNRGYICVISSLLKFDGME 345
H S Y ++ Y GN D + K L++ Y C IS + M
Sbjct: 566 HKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMP 625
Query: 346 SAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
A ++F E + D + N LI Y + G L +A +L
Sbjct: 626 EAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISL 665
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 108/262 (41%), Gaps = 20/262 (7%)
Query: 172 EIIMQQMRDRG--LVKKTID---------YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
I+++ RDR LV++ + +N +++ + G + SL M+E G
Sbjct: 162 HILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLP 221
Query: 221 DKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA--- 277
D TF+ L+ + + ++++V M G D Y + + K G + A
Sbjct: 222 DVVTFNSLIDGYGKCGELDEVEQLVEEMRRS-GCKADVVTYNALINCFCKFGRMETAYGY 280
Query: 278 LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVIS 336
A +++ V+ FS D + G + ++++ + + + + + Y C+I
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKE----GLVREAMKLFAQMRVRGMALNEFTYTCLID 336
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
K ++ A + +E + + ++ L+D C+ + +AE ++ + G
Sbjct: 337 GTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRA 396
Query: 397 NVRTWYLMATGYLQNNQSEKGV 418
N + + G+ N SEK +
Sbjct: 397 NELLYTTLIHGHFMNKNSEKAL 418
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 18/268 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y AL++ A + Q+ +RG++ + YNS+++ G ++++ L+ +M
Sbjct: 197 MYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM 256
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ +D D YTF+IL+ A ++AMM + RG D Y GY
Sbjct: 257 VRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM-SKRGEKPDIVTYNALMEGYCSREN 315
Query: 274 SDKALAVLRK-------SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLK 325
+A + + +VL Y+ +I Y D+ + ++K +NL
Sbjct: 316 VHEARELFNRMVKRGLEPDVL--------NYNVLIDGYCKTKMVDEAMVLFKELCNKNLV 367
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
Y +I L + +K+ +E D+ N LIDA C+ G + +A +
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV 427
Query: 386 IYKAQLRGTEPNVRTWYLMATGY-LQNN 412
+ +G +PN+ T+ M GY L+NN
Sbjct: 428 LVMMMKKGVKPNIVTYNAMMDGYCLRNN 455
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 121/294 (41%), Gaps = 40/294 (13%)
Query: 133 QGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
+ + +A FN + ++ P V Y L++ Y K ++A ++ +++ ++ LV Y
Sbjct: 314 ENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASY 373
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMME 249
NS+++ +G + L+ EM D T++IL+ A C E + +V MM+
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN 309
+GV + Y GY + N + A D + + G
Sbjct: 434 --KGVKPNIVTYNAMMDGYC-------------------LRNNVNVAKD-IFNRMVKSGL 471
Query: 310 KDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
+ D+L N V GY K + ++ A +F+E +NL DI N L
Sbjct: 472 EPDIL--------NYNVLINGYC-------KTEMVDEAIVLFKEMRHKNLIPDIASYNSL 516
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
ID C G + + L+ + G P+V T+ ++ + + +K + ++
Sbjct: 517 IDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQ 570
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 122/298 (40%), Gaps = 17/298 (5%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
LLD+ +P D+ I+I R AL + + M KK + P V +D
Sbjct: 392 LLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG---VKPNIVTYNAMMD 448
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+ A FN + + P + Y L+N Y + ++A ++ ++MR + L+
Sbjct: 449 GYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIP 508
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
YNS+++ G + L+ EM + G D T++ILL A + DK +
Sbjct: 509 DIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKT---QPFDKAI 565
Query: 246 AMM-EADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
++ + G+ D+ K A L+ L+MH + I
Sbjct: 566 SLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKH---LLMHGCSPNVQTYTILIN 622
Query: 305 AAC--GNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNL 359
A C G+ + + + + + N + + + +I LL+ + + AEK+ EE +R L
Sbjct: 623 ALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 129/315 (40%), Gaps = 10/315 (3%)
Query: 116 VLTPADVAI---RLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEK 170
V P ++ L I ++ A S F + K PS+ + L+N Y
Sbjct: 49 VFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAF 108
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS 230
A ++ + G + +N+++N + G K + +G D++T+ L++
Sbjct: 109 AFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLIN 168
Query: 231 ACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMM 289
+ + ++ ME V + +Y+ G K G AL + + E ++
Sbjct: 169 GLSKNGQIKAALHLLQEMEKS-SVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGIL 227
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVW-KRYKQNLKVYNRGYICVISSLLKFDGMESAE 348
+ + Y+ +I + G +V ++ K ++N+ + + +I +L K + A+
Sbjct: 228 LDAVT--YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+ R DI N L++ YC R +H+A L + RG EP+V + ++ GY
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGY 345
Query: 409 LQNNQSEKGVEAMKK 423
+ ++ + K+
Sbjct: 346 CKTKMVDEAMVLFKE 360
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 133/310 (42%), Gaps = 15/310 (4%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I +D + K + +A S F+ + E LP V + +L++ Y ++ E ++++MR
Sbjct: 193 IVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRS 252
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEG 240
G + YN+++N + + G + M+ +G+ + TFS + A C E
Sbjct: 253 GCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREA 312
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
+ K+ A M RG+ L+ Y G KAG D A+ +L + ++ +
Sbjct: 313 M-KLFAQMRV-RGMALNEFTYTCLIDGTCKAGRLDDAIVLLDE---MVRQGVPLNVVTYT 367
Query: 301 ITQYAACGNK-----DDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
+ C + +DVLR+ + K ++ Y +I E A + E +
Sbjct: 368 VLVDGLCKERKVAEAEDVLRMME--KAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
++ L DI + LI C L +A++L+ K G EPN + M ++ +
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485
Query: 416 KGVEAMKKAL 425
+ + ++K L
Sbjct: 486 EAIAMLQKIL 495
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 137/340 (40%), Gaps = 38/340 (11%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTK------------- 111
D + LLD+ V +G PL++ +++ ++ + A + M K
Sbjct: 345 DDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTL 404
Query: 112 -KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEK 170
+F+ ++ A+ L K +G+E S +Y AL+ ++
Sbjct: 405 IHGHFMNKNSEKALGLLSEMKNKGLELDIS-------------LYGALIQGLCNVHKLDE 451
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS 230
A+ ++ +M + GL I Y +MM+ +++G + +++ ++ + G + T+ L+
Sbjct: 452 AKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALID 511
Query: 231 A-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
C A S E I M D G+ + Y G K G ++A+ + + M+
Sbjct: 512 GLCKAGSIDEAISHFNKM--RDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNE----MV 565
Query: 290 HNKFSR---AYDFVITQYAACGNKDDVLRV-WKRYKQNLKVYNRGYICVISSLLKFDGME 345
H S Y ++ Y GN D + K L++ Y C IS + M
Sbjct: 566 HKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMP 625
Query: 346 SAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
A ++F E + D + N LI Y + G L +A +L
Sbjct: 626 EAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISL 665
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/307 (18%), Positives = 130/307 (42%), Gaps = 14/307 (4%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ + +AE +++ M G+ + Y ++++ ++ N +K L+ EM+
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
KG++ D + L+ + ++ M+ + G+ ++ +Y T K+G
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD-ESGLEPNYIIYTTMMDACFKSGKV 484
Query: 275 DKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRG 330
+A+A+L+K ++ + F Y +I G+ D+ + + + + L +
Sbjct: 485 PEAIAMLQK----ILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQA 540
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y ++ L K + A ++F E + + D + L+D Y ++G LH A L K
Sbjct: 541 YTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMI 600
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKK 450
G + ++ + +G+ N + E + + G P + + Y+K
Sbjct: 601 DSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMI-----GHGIAPDRAVYNCLISKYQK 655
Query: 451 ERDIEGA 457
++E A
Sbjct: 656 LGNLEEA 662
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 108/262 (41%), Gaps = 20/262 (7%)
Query: 172 EIIMQQMRDRG--LVKKTID---------YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
I+++ RDR LV++ + +N +++ + G + SL M+E G
Sbjct: 162 HILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLP 221
Query: 221 DKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA--- 277
D TF+ L+ + + ++++V M G D Y + + K G + A
Sbjct: 222 DVVTFNSLIDGYGKCGELDEVEQLVEEMRRS-GCKADVVTYNALINCFCKFGRMETAYGY 280
Query: 278 LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVIS 336
A +++ V+ FS D + G + ++++ + + + + + Y C+I
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKE----GLVREAMKLFAQMRVRGMALNEFTYTCLID 336
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
K ++ A + +E + + ++ L+D C+ + +AE ++ + G
Sbjct: 337 GTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRA 396
Query: 397 NVRTWYLMATGYLQNNQSEKGV 418
N + + G+ N SEK +
Sbjct: 397 NELLYTTLIHGHFMNKNSEKAL 418
>gi|359496212|ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Vitis vinifera]
Length = 379
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 125/304 (41%), Gaps = 11/304 (3%)
Query: 163 ACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDK 222
A AK E I++ + + +M +Y G + L E+ + ++C++
Sbjct: 68 AKAKKLSFIEDILEHQEQYNEISTEVFAVRLMTLYGTAGMFDHAHKLFDELPK--LNCER 125
Query: 223 --YTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV 280
+F+ LLSAC + + ID + + G+V D Y + + + G D AL+V
Sbjct: 126 TVMSFNALLSACVNSKKFDKIDGFFQELPGNLGIVPDVVSYNILVNAFCEMGSLDSALSV 185
Query: 281 LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLL 339
L + E + + ++ ++ + G+ D ++W K+N N R Y + ++
Sbjct: 186 LDEMEKVGLEPDLI-TFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVI 244
Query: 340 KFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVR 399
+ M A ++ +E ++ + D+ N L+ +C G L +A+ Y R P VR
Sbjct: 245 SENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRW-YSEIARNELPPVR 303
Query: 400 TWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADY 459
Y+ +L EKG M L RW L L KE IE A
Sbjct: 304 ATYMTLIPFL----VEKGDFEMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATE 359
Query: 460 FIKL 463
++L
Sbjct: 360 LVEL 363
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 141 YFNCVPEKLKL-PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVY 197
+F +P L + P V Y L+NA+ S + A ++ +M GL I +N+++N +
Sbjct: 149 FFQELPGNLGIVPDVVSYNILVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAF 208
Query: 198 YQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVL 256
YQ G+Y + + M++ + + +++ L + + E ++ I M + G+
Sbjct: 209 YQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEMKTS--GIKP 266
Query: 257 DWTVYATAASGYVKAG 272
D + G+ AG
Sbjct: 267 DVFTLNSLMKGFCNAG 282
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 154/382 (40%), Gaps = 53/382 (13%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+ D V++G +D + + + +R L+I M S +T + I ++ +
Sbjct: 176 VFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD-SGVKITVYSLTIVVEGL 234
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
+ +E++ K P Y ++NAY + E +++ M+ G+V
Sbjct: 235 CRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNK 294
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS----------------- 230
+ Y +M + + G + L EM E+GI+ D + ++ L+S
Sbjct: 295 VTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDE 354
Query: 231 ------ACAAASDGEGIDKIVAMME-----------ADRGVVLDWTVYATAASGYVKAGL 273
+ ++ + G ID + + E +GV + V+ T GY + G+
Sbjct: 355 LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM 414
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ--------NLK 325
D+A + +M K +A F A+C N+ L+ + KQ +K
Sbjct: 415 VDEASMIYD-----VMEQKGFQADVFTCNTIASCFNR---LKRYDEAKQWLFRMMEGGVK 466
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+ Y +I K +E A+++F E S+ + + N +I AYC++G + +A L
Sbjct: 467 LSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL 526
Query: 386 IYKAQLRGTEPNVRTWYLMATG 407
+ G +P+ T+ + G
Sbjct: 527 RANMEANGMDPDSYTYTSLIHG 548
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Query: 142 FNCVPEKLKLPSV-YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQT 200
F + +KL +V Y L++ Y + E+A+ + +M +G+ I YN M+ Y +
Sbjct: 458 FRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQ 517
Query: 201 GNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWT 259
G K+ L ME G+D D YT++ L+ C A + E + M +G+ +
Sbjct: 518 GKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM--GLKGLDQNSV 575
Query: 260 VYATAASGYVKAGLSDKALAV 280
Y SG KAG SD+A +
Sbjct: 576 TYTVMISGLSKAGKSDEAFGL 596
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
+M + G+ T+ Y ++++VY + GN ++ L EM KG+ + T+++++ A
Sbjct: 459 RMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQG 518
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV-LMMHNKFSR 295
+ K+ A MEA+ G+ D Y + G A D+A+ + SE+ L ++ S
Sbjct: 519 KIKEARKLRANMEAN-GMDPDSYTYTSLIHGECIADNVDEAMRLF--SEMGLKGLDQNSV 575
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSL 338
Y +I+ + G D+ ++ K + + N+ Y +I S+
Sbjct: 576 TYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 92/238 (38%), Gaps = 42/238 (17%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
I ++M D G+ ++ + G +K L+ E KGI + YT++ +++A
Sbjct: 211 IFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYV 270
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG-LSD--KALAVLRKSEVLMMH 290
D G++ ++ +M+ D GVV + Y VK G +SD K +R+
Sbjct: 271 KQRDFSGVEGVLKVMKKD-GVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRE------- 322
Query: 291 NKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKI 350
R + + Y + L W K N+K R ++ +
Sbjct: 323 ----RGIESDVHVYTS-------LISWNCRKGNMK---RAFL-----------------L 351
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
F+E + L LID C+ G + AE L+ + Q +G + + GY
Sbjct: 352 FDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGY 409
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 122/275 (44%), Gaps = 8/275 (2%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N+ +A ++ +M +G + + Y ++++ Y G +K+ L+ EM+
Sbjct: 113 YNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQ 172
Query: 215 EKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
KG+ + YT+ SI+L C + EG + MM+ RGV D +Y T G+ K G
Sbjct: 173 LKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMK--RGVFPDHVIYTTLIDGFCKLGN 230
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYI 332
+ A + + E + S A+ +I + G + +++ K+ + Y
Sbjct: 231 TQAAYKLFSEMEAREIVPD-SIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYT 289
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I K M+ A + + L ++ L D C+ G L A L+++ +
Sbjct: 290 ALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRK 349
Query: 393 GTEPNVRTWYLMATGYLQNN---QSEKGVEAMKKA 424
G + N+ T+ + G + Q+ K +E MK+A
Sbjct: 350 GLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEA 384
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 107/262 (40%), Gaps = 19/262 (7%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+ E ++++M RG+ + Y ++++ + + GN + L EME + I D FS L+
Sbjct: 198 EGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALI 257
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
+ + DK+ M +G D Y GY K G KA +
Sbjct: 258 CGLSGSGKVVEADKLFNEM-IKKGFEPDEVTYTALIDGYCKLGEMKKAF---------FL 307
Query: 290 HNKFSR--------AYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLK 340
HN+ + Y + G D + ++ L++ Y +++ L K
Sbjct: 308 HNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCK 367
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
+ A K+ EE + L D L+DAY + G + KA L+ + RG +P V T
Sbjct: 368 AGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVT 427
Query: 401 WYLMATGYLQNNQSEKGVEAMK 422
+ ++ G + + E G +K
Sbjct: 428 FNVLMNGLCMSGKLEDGERLLK 449
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 95/224 (42%), Gaps = 11/224 (4%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y ++N A + +A +M++M++ GL TI Y ++M+ YY+TG K L+ E
Sbjct: 356 STYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLRE 415
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M ++G+ TF++L++ + E ++++ M ++G++ + Y + Y
Sbjct: 416 MLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWM-LEKGIMPNAATYNSIMKQYCIRN 474
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVL-----RVWKRYKQNLKVY 327
+ + R + S Y+ +I + N + V KR+ Y
Sbjct: 475 NMRISTEIYRGMCAQGVVPD-SNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSY 533
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
N +I K + A ++FEE L I N +D
Sbjct: 534 N----ALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVD 573
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Query: 117 LTPADVAIRLDLIAKVQG---IEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKA 171
+ P +A LI + G + +A FN + +K P Y AL++ Y +KA
Sbjct: 246 IVPDSIAFS-ALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKA 304
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
+ QM GL + Y ++ + ++G + L+HEM KG+ + T++ +++
Sbjct: 305 FFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNG 364
Query: 232 -CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
C A + + + + M EA G+ D Y T Y K G KA +LR+
Sbjct: 365 LCKAGNILQAVKLMEEMKEA--GLHPDTITYTTLMDAYYKTGEMVKARELLRE 415
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 313 VLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
VL+V+ + Q +N Y +++SL + + A + E + D+ +ID
Sbjct: 94 VLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIID 153
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
YC G L K L+ + QL+G +PN+ T+
Sbjct: 154 GYCHVGELQKVVQLVKEMQLKGLKPNLYTY 183
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y+ +SS K D + K+F E+ +C + N L+++ R G + +A L+ + +
Sbjct: 80 YLTCLSS--KRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRME 137
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+G P+V ++ + GY + +K V+ +K+
Sbjct: 138 FKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKE 170
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 160/396 (40%), Gaps = 18/396 (4%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
LL + E G D+ I++K F KR AL++ M + TP V +D
Sbjct: 151 LLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVID 210
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+ K Q +++A F + +K P+ Y L++ Y ++ ++Q+M GL
Sbjct: 211 GLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQP 270
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
Y +++ + G + ++ + KGI + + ILL A + +
Sbjct: 271 DCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFL 330
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVIT 302
+M + GV D ++ Y K + D+A+ + K M + S Y +I
Sbjct: 331 DLMVGN-GVSPDHHIFNIMFCAYAKKAMIDEAMHIFDK----MRQQRLSPNIVTYGALID 385
Query: 303 QYAACGNKDD-VLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
G DD VL+ + + + + ++ L D E AE++F E + +
Sbjct: 386 ALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRL 445
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
D N L+ CR G + +A+ LI G P+V ++ + G+ + + EA
Sbjct: 446 DTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRID---EAA 502
Query: 422 KKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGA 457
K V++ G KP K L Y K R I+ A
Sbjct: 503 KLLDVIVSIG--LKPDKVTYNTLLHGYCKARRIDDA 536
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 151/384 (39%), Gaps = 57/384 (14%)
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
AK I++A F+ + ++ P++ Y AL++A + A + QM D G+
Sbjct: 353 AKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDI 412
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID--KIV 245
++S++ ++K + L E+ ++GI D F+ L+ C +G ++ +++
Sbjct: 413 FVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLM--CNLCREGRVMEAQRLI 470
Query: 246 AMM--------------------------EADR--------GVVLDWTVYATAASGYVKA 271
+M EA + G+ D Y T GY KA
Sbjct: 471 DLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKA 530
Query: 272 GLSDKALAVLRKSEVLMMH-NKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLK 325
D A ++ R E+LM Y+ ++ G + ++ R + N+
Sbjct: 531 RRIDDAYSLFR--EMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIY 588
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
YN +I+ L K + ++ A K+F S++L DI N +I A + G A L
Sbjct: 589 TYN----IIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDL 644
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACL 445
G P+V T+ L+A ++ E+ E + E GT P+ L A +
Sbjct: 645 FATISAYGLVPDVETYCLIAENLIKEGSLEELDELFS---AMEENGT--APNSRMLNALV 699
Query: 446 GYYKKERDIEGADYFIKLLTGKEI 469
+ DI A ++ L K
Sbjct: 700 RWLLHRGDINRAGAYLSKLDEKNF 723
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 147/382 (38%), Gaps = 63/382 (16%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV--AI 124
M LD V G D I+ + A+ I M ++ L+P V
Sbjct: 326 MHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQR---LSPNIVTYGA 382
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRG 182
+D + K+ ++ A FN + ++ P +++ +L+ EKAE + ++ D+G
Sbjct: 383 LIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQG 442
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEG- 240
+ T+ +N++M + G + L+ M G+ D +++ L+ C E
Sbjct: 443 IRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAA 502
Query: 241 --IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH-NKFSRAY 297
+D IV++ G+ D Y T GY KA D A ++ R E+LM Y
Sbjct: 503 KLLDVIVSI-----GLKPDKVTYNTLLHGYCKARRIDDAYSLFR--EMLMKGLTPDVVTY 555
Query: 298 DFVITQYAACGNKDDVLRVW-----KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
+ ++ G + ++ R + N+ YN +I+ L K + ++ A K+F
Sbjct: 556 NTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYN----IIINGLCKNNFVDEAFKMFH 611
Query: 353 EWESRNLCHDIRIPNHLIDA----------------------------YC-------RRG 377
S++L DI N +I A YC + G
Sbjct: 612 SLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEG 671
Query: 378 LLHKAETLIYKAQLRGTEPNVR 399
L + + L + GT PN R
Sbjct: 672 SLEELDELFSAMEENGTAPNSR 693
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 89/253 (35%), Gaps = 42/253 (16%)
Query: 207 DSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMM--EADRGVVLDWTVYATA 264
D L+ M E G D +++SILL E ++++MM + D + Y T
Sbjct: 149 DILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTV 208
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
G KA + D+A V F D + +
Sbjct: 209 IDGLCKAQMVDRAKGV------------FQHMID-----------------------KGV 233
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
+ N Y C+I L + ++ +E + L D I L+D C+ G +A
Sbjct: 234 RPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARN 293
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAAC 444
+ +G +PNV + ++ GY +E + M L L+ G P
Sbjct: 294 IFDSVIRKGIKPNVTIYGILLHGY----ATEGSLSEMHSFLDLM-VGNGVSPDHHIFNIM 348
Query: 445 LGYYKKERDIEGA 457
Y K+ I+ A
Sbjct: 349 FCAYAKKAMIDEA 361
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 126/303 (41%), Gaps = 13/303 (4%)
Query: 130 AKVQGIEQAASYF------NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
AK+ I++A F CVP S Y LLN Y + + QM++
Sbjct: 335 AKLGSIKEAMDVFKQMQAAGCVPN----ASTYSILLNLYGKHGRYDDVRELFLQMKESSA 390
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
YN ++ V+ + G +K++ +L H++ ++ ID + T+ L+ AC E K
Sbjct: 391 EPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKK 450
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ 303
I+ M +G+V Y+ Y +A L D+AL + + Y+ +I
Sbjct: 451 ILFHMNG-KGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTID-TYNSLIHT 508
Query: 304 YAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
+A G + + R ++ + + + +I + E A K F E E D
Sbjct: 509 FARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELD 568
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ ++ YC GL+ +++ + + G P+V + +M Y +N + + E +
Sbjct: 569 EQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLD 628
Query: 423 KAL 425
+ +
Sbjct: 629 EMI 631
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 98/241 (40%), Gaps = 37/241 (15%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
EK I +M +G+++ Y +++N Y + G Y+ L+ M+ + + + T++ +
Sbjct: 165 EKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTV 224
Query: 229 LSACAAAS-DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
++ACA D EG+ + A M + GV D Y T S GL D+A V +
Sbjct: 225 INACARGDLDWEGLLGLFAEMRHE-GVQPDLVTYNTLLSACAARGLGDEAEMVFKT---- 279
Query: 288 MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESA 347
M+ IT Y+ ++ + K +E
Sbjct: 280 MIEGGIVPE----ITTYSY---------------------------IVETFGKLGKLEKV 308
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+ +E ES DI N LI+A+ + G + +A + + Q G PN T+ ++
Sbjct: 309 AMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNL 368
Query: 408 Y 408
Y
Sbjct: 369 Y 369
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 109/259 (42%), Gaps = 20/259 (7%)
Query: 151 LPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID-YNSMMNVYYQTGNYKKLD 207
+PS Y L+ AY A ++A + M + G K TID YNS+++ + + G YK+ +
Sbjct: 461 VPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVG-SKSTIDTYNSLIHTFARGGLYKEFE 519
Query: 208 SLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
+++ M E GI + +FS ++ + E K ME R LD
Sbjct: 520 AILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMR-CELDEQTLEGVLGV 578
Query: 268 YVKAGLSDKA---LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
Y AGL D++ ++ S +L Y ++ YA G DD + + +
Sbjct: 579 YCFAGLVDESKEQFIEIKASGIL----PSVLCYCMMLAVYAKNGRWDDASEL---LDEMI 631
Query: 325 KVYNRGYICVISSLLKFD-----GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
K VI ++K D + E +F++ + +R N L++A G
Sbjct: 632 KTRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLLEALWWLGQK 691
Query: 380 HKAETLIYKAQLRGTEPNV 398
+A ++ +A RG P +
Sbjct: 692 GRAARVLTEATKRGLFPEL 710
>gi|125579821|gb|EAZ20967.1| hypothetical protein OsJ_36620 [Oryza sativa Japonica Group]
Length = 408
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 140/331 (42%), Gaps = 26/331 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y ++++A +SA +A +I++QM G I +N+++ G+ +K + + E
Sbjct: 12 IYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA 71
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ ++ ++ +++ L+ C D +V MM RG D + G V AG
Sbjct: 72 IRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMM--GRGHTPDVVTFGALIHGLVVAG 129
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-----YKQNLKVY 327
+AL V K + F + + C K +L K ++N++
Sbjct: 130 KVSEALIVREK---MTERQVFPDVNIYNVLISGLC--KKRMLPAAKNILEEMLEKNVQPD 184
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y +I ++ + + A KIFE E + +C DI N +I YC+ G++ +A +
Sbjct: 185 EFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMS 244
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGY 447
+ G P+ T+ + +GY + E + + E L+ +G
Sbjct: 245 NMRKVGCIPDEFTYTTVISGYAKQEGDTDSAEGLFANM-----------QAEALSPNVGI 293
Query: 448 YKKERDIEGADYFIKLLTGKEIISADLQDRL 478
+ + + F++L+ +E + D ++R+
Sbjct: 294 QGIQHSMPSSLAFVELIFSREAL--DFKNRM 322
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 122/264 (46%), Gaps = 11/264 (4%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y LLNA+ AK K E + G+ YN ++ + + ++K ++ M
Sbjct: 117 YNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMW 176
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAG 272
++G D +++S +++ A +D + + + ++R V D T Y G++K
Sbjct: 177 KEGFKPDVFSYSTVINDLAKTGK---LDDALELFDEMSERRVAPDVTCYNILIDGFLKE- 232
Query: 273 LSDKALAVLRKSEVLMMHNKFS--RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-R 329
D +A+ ++L + + + ++ +I+ + CG DD L++W R KQN + +
Sbjct: 233 -KDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLY 291
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +I L ++ AE +F E R D+ N ++ +CR G + ++ L
Sbjct: 292 TYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQ 413
+ R + N+ ++ ++ G L+N +
Sbjct: 352 EQRNS-VNIVSYNILIKGLLENGK 374
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 136/342 (39%), Gaps = 12/342 (3%)
Query: 78 GRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQ 137
G +++ ++IK K F A WM K+ F + ++ +AK ++
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEG-FKPDVFSYSTVINDLAKTGKLDD 202
Query: 138 AASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKA-EIIMQQMRDRGLVKKTIDYNSMM 194
A F+ + E+ P V Y L++ + K + A ++ + + D + +N M+
Sbjct: 203 ALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMI 262
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADR 252
+ + G + M++ + D YT+S L+ D +DK ++ +R
Sbjct: 263 SGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLC---DEGNVDKAESVFNELVER 319
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD 312
+D Y T G+ + G ++L + R E N S Y+ +I G D+
Sbjct: 320 KAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIVS--YNILIKGLLENGKIDE 377
Query: 313 VLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
+W+ + N Y I L + A + +E ES+ D+ +ID
Sbjct: 378 ATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIID 437
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
C++ L +A L+ + G E N + G +++++
Sbjct: 438 CLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 126/303 (41%), Gaps = 13/303 (4%)
Query: 130 AKVQGIEQAASYF------NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
AK+ I++A F CVP S Y LLN Y + + QM++
Sbjct: 335 AKLGSIKEAMDVFKQMQAAGCVPN----ASTYSILLNLYGKHGRYDDVRELFLQMKESSA 390
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
YN ++ V+ + G +K++ +L H++ ++ ID + T+ L+ AC E K
Sbjct: 391 EPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKK 450
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ 303
I+ M +G+V Y+ Y +A L D+AL + + Y+ +I
Sbjct: 451 ILFHMNG-KGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTID-TYNSLIHT 508
Query: 304 YAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
+A G + + R ++ + + + +I + E A K F E E D
Sbjct: 509 FARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELD 568
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ ++ YC GL+ +++ + + G P+V + +M Y +N + + E +
Sbjct: 569 EQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLD 628
Query: 423 KAL 425
+ +
Sbjct: 629 EMI 631
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 98/241 (40%), Gaps = 37/241 (15%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
EK I +M +G+++ Y +++N Y + G Y+ L+ M+ + + + T++ +
Sbjct: 165 EKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTV 224
Query: 229 LSACAAAS-DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
++ACA D EG+ + A M + GV D Y T S GL D+A V +
Sbjct: 225 INACARGDLDWEGLLGLFAEMRHE-GVQPDLVTYNTLLSACAARGLGDEAEMVFKT---- 279
Query: 288 MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESA 347
M+ IT Y+ ++ + K +E
Sbjct: 280 MIEGGIVPE----ITTYSY---------------------------IVETFGKLGKLEKV 308
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+ +E ES DI N LI+A+ + G + +A + + Q G PN T+ ++
Sbjct: 309 AMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNL 368
Query: 408 Y 408
Y
Sbjct: 369 Y 369
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 109/259 (42%), Gaps = 20/259 (7%)
Query: 151 LPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID-YNSMMNVYYQTGNYKKLD 207
+PS Y L+ AY A ++A + M + G K TID YNS+++ + + G YK+ +
Sbjct: 461 VPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVG-SKSTIDTYNSLIHTFARGGLYKEFE 519
Query: 208 SLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
+++ M E GI + +FS ++ + E K ME R LD
Sbjct: 520 AILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMR-CELDEQTLEGVLGV 578
Query: 268 YVKAGLSDKA---LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
Y AGL D++ ++ S +L Y ++ YA G DD + + +
Sbjct: 579 YCFAGLVDESKEQFIEIKASGIL----PSVLCYCMMLAVYAKNGRWDDASEL---LDEMI 631
Query: 325 KVYNRGYICVISSLLKFD-----GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
K VI ++K D + E +F++ + +R N L++A G
Sbjct: 632 KTRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLLEALWWLGQK 691
Query: 380 HKAETLIYKAQLRGTEPNV 398
+A ++ +A RG P +
Sbjct: 692 GRAARVLTEATKRGLFPEL 710
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 116/273 (42%), Gaps = 19/273 (6%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQT----GNYKKLDSLM 210
Y L++ + A A ++Q+M + + + N+ + V Q+ L+
Sbjct: 152 YTKLVHGLSKAGRLRDAVQVLQEM----VSARHVPDNTTLTVVVQSLCLGDRVDDARELV 207
Query: 211 HEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD---RGVVLDWTVYATAASG 267
EM +G+ + T+S L+ E +D+ VA++ + RG D Y+T G
Sbjct: 208 EEMLHRGMAANAITYSALVDGLCKC---ERLDEAVALLLGEVTRRGFTPDIVTYSTVIDG 264
Query: 268 YVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-KRYKQNLKV 326
KAG A+ + + M + Y+ +I Y G+ D+ +R+ K N
Sbjct: 265 LCKAGRLRDAVDIFEE----MSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAP 320
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
Y ++S+ K ++ A ++F++ + L D+ L+D C G + A L+
Sbjct: 321 DVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELL 380
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+ RG P + T+ + GY ++NQ K E
Sbjct: 381 EEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEE 413
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 119/264 (45%), Gaps = 21/264 (7%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS----LMHEMEEKGIDCDKYT 224
+ A ++++M RG+ I Y+++++ + ++LD L+ E+ +G D T
Sbjct: 201 DDARELVEEMLHRGMAANAITYSALVDGLCKC---ERLDEAVALLLGEVTRRGFTPDIVT 257
Query: 225 FSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
+S ++ C A + +D M A + Y + GY +AG D+A+ +L K
Sbjct: 258 YSTVIDGLCKAGRLRDAVDIFEEMSCAPTAIT-----YNSLIGGYCRAGDMDEAIRLLGK 312
Query: 284 SEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLL 339
M+ + + Y +++ + G DD ++++ N L + ++ L
Sbjct: 313 ----MVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLC 368
Query: 340 KFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVR 399
ME A ++ EE R I N ++D YC+ + KAE L+ + RG PN
Sbjct: 369 GEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTV 428
Query: 400 TWYLMATGYLQNNQSEKGVEAMKK 423
T+ ++ G + ++++ ++ + +
Sbjct: 429 TYNILVAGCCRAGRTDQALQYLDQ 452
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
NC P+ + Y L++A+ + A + QQM L + + S+++ G
Sbjct: 317 NCAPDVI----TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGR 372
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
+ L+ E+ +G YT++ ++ ++ +++VA + RG V + Y
Sbjct: 373 MEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRS-RGFVPNTVTYN 431
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA-YDFVITQYAACGNKDDVLRVWKRYK 321
+G +AG +D+AL L + S A Y ++ G DD ++ ++
Sbjct: 432 ILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMI 491
Query: 322 QNLKVYNRGYI-------CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
Q RGY+ V+ +L K + A ++ EE + ++ AYC
Sbjct: 492 Q------RGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYC 545
Query: 375 RRGLLHKAETLIYKAQL 391
R G++ KA+ L + +L
Sbjct: 546 RAGMIQKADELASELRL 562
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 109/270 (40%), Gaps = 6/270 (2%)
Query: 156 IALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEE 215
+ L +A AK +++ ++RDRGL ++ N+++ + +L +M E
Sbjct: 15 VVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAE 74
Query: 216 KGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
G ++++ C A E + ++ M RG+ ++ G +AG
Sbjct: 75 LGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKS--RGMNPGTLLHNVVIGGLCRAGRLR 132
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY-NRGYICV 334
AL V R+ H Y ++ + G D ++V + V N V
Sbjct: 133 HALGVYRQMND--AHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVV 190
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY-KAQLRG 393
+ SL D ++ A ++ EE R + + + L+D C+ L +A L+ + RG
Sbjct: 191 VQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRG 250
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
P++ T+ + G + + V+ ++
Sbjct: 251 FTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 280
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 97/252 (38%), Gaps = 15/252 (5%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D + LL + V++ D+ ++ F R A ++ M L+P DV
Sbjct: 304 DEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANK---LSP-DVVT 359
Query: 125 RLDLIAKVQG---IEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMR 179
L+ + G +E A + + P++Y +++ Y + KAE ++ R
Sbjct: 360 FTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFR 419
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYT--FSILLSACAAASD 237
RG V T+ YN ++ + G + + ++ +G C ++I+L A D
Sbjct: 420 SRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILD--ALCRD 477
Query: 238 GEGIDKIVAMMEA-DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA 296
G D + E RG V +AT KA +A +L + + H
Sbjct: 478 GRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEM-IKYGHTPGPGT 536
Query: 297 YDFVITQYAACG 308
D V++ Y G
Sbjct: 537 CDAVVSAYCRAG 548
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 19/267 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY L+ YA E+A ++ M G+ YN++++ + G ++ + + E+
Sbjct: 187 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 246
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--------DRGVVLDWTVYATAA 265
+ +G+ D TF + G K M EA D G++ + +Y
Sbjct: 247 QGRGLKPDAVTFGAFIL---------GYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLI 297
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK 325
+G+ KAG +AL++ R L + F I G + L+V+ K+
Sbjct: 298 NGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF-IHGLLKNGRVQEALKVFSELKEKGL 356
Query: 326 VYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
V + Y +IS K +E A ++ +E + + +I I N L+D C+ G + +A
Sbjct: 357 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARK 416
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQN 411
L +G EP+ T+ M GY ++
Sbjct: 417 LFDGMPEKGLEPDSVTYSTMIDGYCKS 443
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 119/278 (42%), Gaps = 13/278 (4%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
N VP + Y A++N K A ++++M GL + Y++++ Y G
Sbjct: 145 NLVPSAVS----YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGR 200
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
++ L+ M G+ D + ++ ++S + A E + ++ RG+ D +
Sbjct: 201 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG-RGLKPDAVTFG 259
Query: 263 TAASGYVKAGLSDKALAVLRK--SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
GY K G +A + LM +N Y +I + GN + L ++ R+
Sbjct: 260 AFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL---YTVLINGHFKAGNLMEALSIF-RH 315
Query: 321 KQNLKVYNRGYIC--VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
L V C I LLK ++ A K+F E + + L D+ + LI +C++G
Sbjct: 316 LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 375
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ KA L + L+G PN+ + + G ++ ++
Sbjct: 376 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQR 413
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/302 (18%), Positives = 122/302 (40%), Gaps = 38/302 (12%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+ ++K +E+A++Y + + P + A + Y+ +A +M D GL
Sbjct: 227 ISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGL 286
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ Y ++N +++ GN + S+ + G+ D T S + + K
Sbjct: 287 MPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALK 346
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ 303
+ + ++ ++G+V D Y++ SG+ K G +KA +H++
Sbjct: 347 VFSELK-EKGLVPDVFTYSSLISGFCKQGEVEKAFE---------LHDEM---------- 386
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
K N+ +YN ++ L K ++ A K+F+ + L D
Sbjct: 387 ------------CLKGIAPNIFIYNA----LVDGLCKSGDIQRARKLFDGMPEKGLEPDS 430
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ +ID YC+ + +A +L ++ +G +P+ + + G + EK + ++
Sbjct: 431 VTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFRE 490
Query: 424 AL 425
L
Sbjct: 491 ML 492
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 120/271 (44%), Gaps = 31/271 (11%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+++I AL++ + ++A + M ++GL ++ Y++M++ Y ++ N + SL
Sbjct: 393 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 452
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGE-GIDKIVAMMEADRGVVLDWTVYATAASGY 268
HEM KG+ + ++ L+ C D E ++ M++ L + T GY
Sbjct: 453 FHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFN---TLIDGY 509
Query: 269 VKAGLSDKALAVLRK---SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NL 324
K+ +A + ++ +++ H Y VI + G ++ ++K ++ NL
Sbjct: 510 CKSCKIQEASQLFQEMIAKQIMPDH----VTYTTVIDWHCKAGKMEEANLLFKEMQERNL 565
Query: 325 ----------KVYNRG-------YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
K+ +G Y VI + K D + A K+ +E + + I +
Sbjct: 566 IVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHD 625
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
LI A C+R L +A L+ + G +P++
Sbjct: 626 LLITALCKREDLTEASKLLDEMGELGLKPSL 656
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 135/305 (44%), Gaps = 32/305 (10%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSA--EKAEIIMQQMRDRGL 183
+D K + + +A S F+ +P K P ++ + C K EKA + ++M +G
Sbjct: 437 IDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF 496
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
T+ +N++++ Y ++ ++ L EM K I D T++ ++ A E +
Sbjct: 497 A-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 555
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV-LRKSEVLMMHNKFSRAYDFVIT 302
+ M+ +R +++D TV+A L +K +A ++ EV Y VI
Sbjct: 556 LFKEMQ-ERNLIVD-TVFA----------LFEKMVAKGVKPDEV---------TYGLVI- 593
Query: 303 QYAACGNKDDVLRVWKRYKQNL--KVYNRGYI--CVISSLLKFDGMESAEKIFEEWESRN 358
YA C +D+++ +K + + + +G I +I++L K + + A K+ +E
Sbjct: 594 -YAHC-KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG 651
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
L + + L+ ++ G + +A + + G P+ T + G L + SE
Sbjct: 652 LKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDAR 711
Query: 419 EAMKK 423
+K+
Sbjct: 712 NLIKQ 716
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 119/296 (40%), Gaps = 23/296 (7%)
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
M ++GLV T Y + + + EM++ G+ D +AC+A D
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPD-------YNACSALID 53
Query: 238 G---EG-IDKIVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
G EG ID+++ + + G+ ++ Y G K G +KA +L K + +
Sbjct: 54 GFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEIL-KGMITLGCK 112
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKI 350
SR + +I Y N L + K+NL Y +I+ L + A K+
Sbjct: 113 PNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKL 172
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
E+ L ++ + + LI Y G + +A L+ G P++ + + + +
Sbjct: 173 LEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSK 232
Query: 411 NNQSEKGVEAMKKALVLLE-AGTRWKPSKECLAA-CLGYYKKERDIEGADYFIKLL 464
+ E+ + LLE G KP A LGY K + E A YF ++L
Sbjct: 233 AGKMEEA------STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 282
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 117/266 (43%), Gaps = 5/266 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ ++LNA+ + +AE+ + G+ YN ++ + + ++K L+ M
Sbjct: 117 FNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMF 176
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD-RGVVLDWTVYATAASGYVKAGL 273
E G++ D ++ L++A A + G +D + E RGV D Y G+++ G
Sbjct: 177 ENGLNPDILSYGTLINALAKS--GNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGD 234
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYI 332
KA + ++ Y+ +I G D+ + +W R K+N K + +
Sbjct: 235 FVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFS 294
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I L K +AEK+F+E L D+R N ++ R G L+K L + +
Sbjct: 295 SMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFEL-WNVMSK 353
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGV 418
N+ ++ ++ G L N + E+ +
Sbjct: 354 NNCCNIVSYNMLIQGLLDNKKVEQAI 379
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/354 (19%), Positives = 150/354 (42%), Gaps = 16/354 (4%)
Query: 78 GRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA--IRLDLIAKVQGI 135
G +++ I+IK ++F + WM + L P ++ ++ +AK +
Sbjct: 144 GMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENG---LNPDILSYGTLINALAKSGNL 200
Query: 136 EQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID-YNS 192
A F+ + + P V Y L++ + KA I +++ V +++ YN
Sbjct: 201 LDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNI 260
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
M+N + G + + + M++ D +TFS ++ + A + +K+ M +
Sbjct: 261 MINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEM-IES 319
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR--AYDFVITQYAACGNK 310
G+ D Y SG + G +K + +M N +Y+ +I
Sbjct: 320 GLSPDVRTYNAMLSGLFRTGKLNKCFELWN----VMSKNNCCNIVSYNMLIQGLLDNKKV 375
Query: 311 DDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
+ + W+ +++ LK + Y +I+ L K + A +I EE E+ D + +
Sbjct: 376 EQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSM 435
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ C++G+L +A LI++ + + N + + GY++ + E+ + +++
Sbjct: 436 VHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLRE 489
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 119/314 (37%), Gaps = 79/314 (25%)
Query: 166 KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF 225
K E+A Q + +RGL + Y ++N + G K ++ E E +G D D + +
Sbjct: 373 KKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAY 432
Query: 226 SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-- 283
S ++ E +++ M+ +R L+ V+ + +GYV+A ++A++VLR+
Sbjct: 433 SSMVHGLCKKGMLEQAVELIHQMKKNRRK-LNSHVFNSLINGYVRAFKLEEAISVLREMK 491
Query: 284 ----SEVLMMHN----------KFSRAY----------------DFVITQYAAC-GNKDD 312
+ ++ +N +FS AY + + C G K D
Sbjct: 492 SKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVD 551
Query: 313 V-LRVW-----KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
+ L +W KR K +L+++N +I L ++ A +IF + N D+
Sbjct: 552 MALNLWHQCINKRLKPDLQMHN----IIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTH 607
Query: 367 NHLIDAY-----------------------------------CRRGLLHKAETLIYKAQL 391
N +++ C + A +Y A
Sbjct: 608 NTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALD 667
Query: 392 RGTEPNVRTWYLMA 405
RG PN TW ++
Sbjct: 668 RGILPNAPTWNVLV 681
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 139/331 (41%), Gaps = 46/331 (13%)
Query: 106 SMWMTKKSNFVLTPADVAIRL--DLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNA 161
+M+ K +F +TP L + K IE A + +P +P++ Y +L
Sbjct: 174 AMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGG 233
Query: 162 YACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCD 221
Y E A+ ++++M DRG I Y +M+ Y + G + + ++M +ME+ I+ +
Sbjct: 234 YVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPN 293
Query: 222 KYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV 280
+ T+ +++ A C GE + M+ DR + D ++ + D+A +
Sbjct: 294 EVTYGVMIRALCKEKKSGEARNMFDEML--DRSFMPDSSLCCKVIDALCEDHKVDEACGL 351
Query: 281 LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLK 340
RK M+ N C + +L +I L K
Sbjct: 352 WRK----MLKNN--------------CMPDNALLST-----------------LIHWLCK 376
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
+ A K+F+E++ ++ + N LI C +G L +A L R +PN T
Sbjct: 377 EGRVSEARKLFDEFDKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFT 435
Query: 401 WYLMATGYLQNNQSEKGVEAMKKALVLLEAG 431
+ ++ G +N ++GV +++ +LE+G
Sbjct: 436 YNVLIEGLSKNGNVKEGVRVLEE---MLESG 463
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 39/291 (13%)
Query: 163 ACAKSA---EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGID 219
AC K +A I +M G+ I +NS++ V + G ++ +L EM +GI+
Sbjct: 264 ACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIE 323
Query: 220 CDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALA 279
D +T++ LL A + +I++ M + ++ + Y+T GY KAG D+AL
Sbjct: 324 QDIFTYNTLLDAVCKGGQMDLAFQIMSEM-PRKHIMPNVVTYSTVIDGYAKAGRLDEALN 382
Query: 280 VLRK-------------SEVLMMHNKFSR---------------------AYDFVITQYA 305
+ + + +L ++ K R Y+ ++ Y
Sbjct: 383 LFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYG 442
Query: 306 ACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
G ++V RV++ K N Y +I K + A ++F E++ L D+
Sbjct: 443 KQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVV 502
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+ + LIDA C+ GL+ A + + + G PNV T+ + + ++ +E
Sbjct: 503 LYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAE 553
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 132/303 (43%), Gaps = 8/303 (2%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGL 183
+ ++ ++ +E A + F + +VY AL++AY + ++A + + M+ GL
Sbjct: 192 ISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGL 251
Query: 184 VKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ YN++++ + G ++ + + EM G+ D+ TF+ LL+ C E
Sbjct: 252 KPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAAR 311
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVI 301
+ + M RG+ D Y T K G D A ++ + +M N + Y VI
Sbjct: 312 NLFSEM-LYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVT--YSTVI 368
Query: 302 TQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
YA G D+ L ++ K ++ + Y ++S K E A + +E ES +
Sbjct: 369 DGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIK 428
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
D N L+ Y ++G + + + + + PN+ T+ + Y + ++ +E
Sbjct: 429 KDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEV 488
Query: 421 MKK 423
++
Sbjct: 489 FRE 491
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 137/321 (42%), Gaps = 45/321 (14%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKL---DSLMHEME 214
++N KA I++ M+ RG+ I YN++++ Y + G K+ D+++ EM
Sbjct: 169 VINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMR 228
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
GI ++ TF+IL+ + K+ A M +GV + Y + +G G
Sbjct: 229 ADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNR-QGVKPNVVTYNSLINGLCNNGKV 287
Query: 275 DKALAVLRKSEV-------LMMHNKFSRAYDFVITQYAACGNK---------DDVLRVWK 318
++A A LR V ++ HN + C NK DD+ + +
Sbjct: 288 NEATA-LRDQMVNSCLKPNIITHNALLNGF---------CKNKMVKQAGELFDDMPK--Q 335
Query: 319 RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
N+ YN +I + K + ME A ++ + +C D+ N LI CR+G
Sbjct: 336 GITPNVTTYN----ILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGD 391
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTR--WKP 436
L A L+ + + + ++ T+ ++ N+ E MKKAL LL+ R KP
Sbjct: 392 LEAARNLVSEMDTKHLKADLITYNILIDSLC--NKGE-----MKKALRLLDEMCRKGLKP 444
Query: 437 SKECLAACLGYYKKERDIEGA 457
S+ + Y KE ++ A
Sbjct: 445 SQLTYNTMIDGYCKEGNLRAA 465
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 15/242 (6%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
ALLN + K ++A + M +G+ YN +++ Y + N + +L M K
Sbjct: 311 ALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGK 370
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
G+ D T++ L++ D E +V+ M+ + + D Y G K
Sbjct: 371 GVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDT-KHLKADLITYNILIDSLCNKGEMKK 429
Query: 277 ALAVLRKSEVLMMHNKFSR-AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-YICV 334
AL +L E+ K S+ Y+ +I Y GN L + + ++ ++ N Y +
Sbjct: 430 ALRLL--DEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVL 487
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL-----IDAYCRRGLLHKAETLIYKA 389
I K D +E A + E + L IPN + + +G + E +YK
Sbjct: 488 IKGFCKKDKLEDANGLLNEMLEKGL-----IPNRMTYEIVTEEMMEKGFVPDIEGHLYKV 542
Query: 390 QL 391
+
Sbjct: 543 AV 544
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 3/149 (2%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
L+ K + ++QA F+ +P++ P+V Y L++AY ++ E A + + M +G+
Sbjct: 313 LNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGV 372
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
YN ++ + G+ + +L+ EM+ K + D T++IL+ + + + +
Sbjct: 373 CPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALR 432
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAG 272
++ M +G+ Y T GY K G
Sbjct: 433 LLDEM-CRKGLKPSQLTYNTMIDGYCKEG 460
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 130/305 (42%), Gaps = 20/305 (6%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
LDL+ +V G L P+V Y +++ K A + +M +G+
Sbjct: 182 LDLLRRVDG-------------NLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGI 228
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGID 242
+ Y+++++ ++ G K L ++M + I D YTF+IL+ C EG
Sbjct: 229 SPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEG-- 286
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
K V M +G+ + Y + GY +KA ++L + N ++Y+ +I
Sbjct: 287 KTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGV-NPDIQSYNILID 345
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
+ D+ + ++K + + Y +I L K + A K+ +E R +
Sbjct: 346 GFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPP 405
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
DI + ++DA C+ + KA L+ K + +G PN+ T+ ++ G + + E
Sbjct: 406 DIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIF 465
Query: 422 KKALV 426
+ LV
Sbjct: 466 EDLLV 470
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 109/280 (38%), Gaps = 41/280 (14%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y +L++ Y K KA+ I+ M RG+ YN +++ + + + +L
Sbjct: 300 PNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNL 359
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
EM K I D T++ L+ K+V M DRGV D Y++
Sbjct: 360 FKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH-DRGVPPDIITYSSILDALC 418
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
K DKA+A+L K + Q ++
Sbjct: 419 KNHQVDKAIALLTKLK-----------------------------------DQGIRPNMY 443
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +I L K +E A IFE+ + + +I +C +GL +A L+ K
Sbjct: 444 TYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKM 503
Query: 390 QLRGTEPNVRTWYLMATGYL---QNNQSEKGVEAMKKALV 426
+ P+ T+ ++ +N+++EK E + + L+
Sbjct: 504 KDNSCIPDAVTYEIIIRSLFDKDENDKAEKLREMITRGLL 543
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 102/246 (41%), Gaps = 35/246 (14%)
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGID----------------CDKYTFSILLSA 231
I++N ++ ++ +Y + SL +ME +GI+ + TF+ L+
Sbjct: 77 IEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKG 136
Query: 232 -CAAASDGEGI---DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
C + + D +VAM G LD Y T G K G + AL +LR+ +
Sbjct: 137 LCLKGQIHQALLFHDNVVAM-----GFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGN 191
Query: 288 MMHNKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVYNRGYICVISSLLKFD 342
++ Y +I + +D ++ K N+ Y+ +IS
Sbjct: 192 LVQPNVV-MYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYS----ALISGFFTVG 246
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
++ A +F + N+ D+ N L+D +C+ G + + +T+ +G +PNV T+
Sbjct: 247 QLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYC 306
Query: 403 LMATGY 408
+ GY
Sbjct: 307 SLMDGY 312
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 148/376 (39%), Gaps = 51/376 (13%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+++A S F+ + ++ P V Y ++++A + ++ +KA + +M G++ I Y S
Sbjct: 224 LDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTS 283
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+++ Y +G K+ + +M G++ D T++ L+ KI + R
Sbjct: 284 LVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSL-VKR 342
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDFVITQYAACGN 309
G D T Y T GY G AL + LMM ++ ++ YA
Sbjct: 343 GHKPDSTTYGTLLHGYATEG----ALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNK 398
Query: 310 KDDVLRVWKRYKQ---NLKVYNRG---------------------------------YIC 333
D+ L V+ +Q N + N G +
Sbjct: 399 VDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTT 458
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+I L D + E++ E R +C D N ++ C++G + +A+ L G
Sbjct: 459 LIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIG 518
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERD 453
EPN T+ + GY + + + EAMK V++ G KPS + Y +
Sbjct: 519 IEPNTNTYNTLIDGYCLDGKMD---EAMKLLGVMVFNGV--KPSDVTYNTIINGYSQNGR 573
Query: 454 IEGADYFIKLLTGKEI 469
IE ++ + GK +
Sbjct: 574 IEDGLTLLREMDGKGV 589
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 97/252 (38%), Gaps = 41/252 (16%)
Query: 201 GNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWT 259
G ++D ++ M E G D ++++ILL C + + +D + M + LD
Sbjct: 150 GRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVV 209
Query: 260 VYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR 319
Y T +G ++ G DKA ++ +D ++ + G DV+
Sbjct: 210 AYTTVINGLLREGQLDKAYSL----------------FDAMLDR----GPSPDVVT---- 245
Query: 320 YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
Y +IS+L K M+ A ++F + D + L+ YC G
Sbjct: 246 -----------YSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKP 294
Query: 380 HKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKE 439
+A + K G EP+V T+ + +N +S EA K L++ G KP
Sbjct: 295 KEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKS---TEARKIFDSLVKRG--HKPDST 349
Query: 440 CLAACLGYYKKE 451
L Y E
Sbjct: 350 TYGTLLHGYATE 361
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 153/366 (41%), Gaps = 31/366 (8%)
Query: 64 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPA-DV 122
+DS+ LLD V+ +Q R+ I F L I + S F+ A
Sbjct: 517 SDSLTLLLDHLVK------TKQFRVTINVF---------LNILESDFRPSKFMYGKAIQA 561
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRD 180
A++L + K G+E FN + P+V+I L++ + + AE + +M
Sbjct: 562 AVKLSDVGK--GLE----LFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLA 615
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
R L+ I YN++++ Y + GN +K + M+ I+ TF+ LL A E
Sbjct: 616 RRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVED 675
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
+ ++ M+ D+G V D ++ GY +DKA A L E + AY
Sbjct: 676 AENVLTEMK-DQGFVPDAFTFSILFDGYSS---NDKADAALGVYETAVDSGLKMNAYTCS 731
Query: 301 ITQYAAC--GNKDDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESR 357
I A C G + + R V N Y +I + + A + E +
Sbjct: 732 ILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQ 791
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ D N LI +C G + AE + K +L+G P+V T+ ++ GY + + +K
Sbjct: 792 GMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 851
Query: 418 VEAMKK 423
+ +K+
Sbjct: 852 FDLLKE 857
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 145/333 (43%), Gaps = 62/333 (18%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
+ +D + KV+ ++ A F+ + + LPS+ Y L++ Y + EK+ + ++M+
Sbjct: 592 VLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKAD 651
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
+ I +N+++ ++ G + ++++ EM+++G D +TFSIL S +
Sbjct: 652 NIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDG---YSSNDKA 708
Query: 242 DKIVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKALAVLRK--------SEVL--MM 289
D + + E D G+ ++ + + K G +KA +L + +EVL M
Sbjct: 709 DAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTM 768
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEK 349
+ +SR D V + +++ KQ +K + Y C+I + + ME+AE+
Sbjct: 769 IDGYSRKGDLVGAR----------MKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQ 818
Query: 350 ---------IFEEWESRNL-------------CHDI--------RIPN-----HLIDAYC 374
+ E+ N+ C D+ +PN LI+ C
Sbjct: 819 EVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLC 878
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+ L +A+ + + RG PNVR + ++ G
Sbjct: 879 KGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDG 911
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 17/259 (6%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
LLNA EKAE I+ + +GLV + YN+M++ Y + G+ + ME++G
Sbjct: 733 LLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQG 792
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
+ D ++ L+ D E ++ V M+ +GV Y GY + DK
Sbjct: 793 MKPDHLAYNCLIRTFCELGDMENAEQEVNKMKL-KGVSPSVETYNILIGGYGRKYEFDKC 851
Query: 278 LAVLRKSE-VLMMHNKFSRAYDFVITQYAAC-GNKDDVLRVWKR------YKQNLKVYNR 329
+L++ E M N S Y +I C G+K ++ KR N+++YN
Sbjct: 852 FDLLKEMEDNGTMPNVVS--YGTLIN--CLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNM 907
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
+I +E A + EE + + ++ N LID G L +AE ++ +
Sbjct: 908 ----LIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEI 963
Query: 390 QLRGTEPNVRTWYLMATGY 408
+G +P+V T+ + +GY
Sbjct: 964 SRKGLKPDVFTYNSLISGY 982
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 19/242 (7%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PSV Y L+ Y +K ++++M D G + + Y +++N + + +
Sbjct: 830 PSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 889
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+ME++G+ + +++L+ C + E + M +G+ L+ Y T G
Sbjct: 890 KRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEM-FKKGIELNLVTYNTLIDGLS 948
Query: 270 KAG-LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN----- 323
G L++ +L S + + F+ Y+ +I+ Y GN + +++ K +
Sbjct: 949 MNGKLAEAEDMLLEISRKGLKPDVFT--YNSLISGYRFAGNVQRCIALYEEMKTSGIKPT 1006
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
LK Y+ ++ SL +G+E +KIF E +L D+ + N ++ Y G + KA
Sbjct: 1007 LKTYH-----LLISLCTKEGIELTKKIFGEM---SLQPDLLVYNGVLHCYAVHGDMDKAF 1058
Query: 384 TL 385
L
Sbjct: 1059 NL 1060
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++ + +AE ++ ++ +GL YNS+++ Y GN ++ +L EM
Sbjct: 939 TYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEM 998
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ GI T+ +L+S C EGI+ + + + + D VY Y G
Sbjct: 999 KTSGIKPTLKTYHLLISLCTK----EGIE-LTKKIFGEMSLQPDLLVYNGVLHCYAVHGD 1053
Query: 274 SDKALAVLRK 283
DKA + ++
Sbjct: 1054 MDKAFNLQKQ 1063
>gi|255538774|ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551153|gb|EEF52639.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1218
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 111/273 (40%), Gaps = 52/273 (19%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
AL++ Y E+A+ + MR+ G+ + +N ++ Y Q G + LM +ME
Sbjct: 245 ALISGYCQHGQIEEAQRLFDAMREEGIEPGLVSWNILIAGYNQLGYFDIAMELMKKMEVL 304
Query: 217 GIDCDKYTFSILLSACAAASDGEGI-----DKIVAMMEADRGVVLDWTVYATAASGYVKA 271
G D T++ ++S A D I+A +E + GV + V A A+ +
Sbjct: 305 GTSPDVVTWTSMISGLAQNDKASKALHLFNDMILARVEPN-GVTISSAVSACASLKVLNE 363
Query: 272 GLSDKALAV-LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG 330
GL ALAV L E +++ N +I Y+ CG
Sbjct: 364 GLEIHALAVKLGFVEDVLVGNS-------LIDMYSKCGK--------------------- 395
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
+E+A K+F+ + D+ N +I YC+ G KA L K Q
Sbjct: 396 -------------LENAWKVFDMMPEK----DVYTWNSMIGGYCQVGYCGKAHMLFMKMQ 438
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
T+PN TW M GY+ N ++ ++ ++
Sbjct: 439 KSETQPNAITWNNMIWGYIHNGDEDQAMDLFRR 471
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 8/126 (6%)
Query: 306 ACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLL----KFDGMESAEKIFEEWESRNLCH 361
ACGN D+ + +K GY V +S+L K + A K FE +
Sbjct: 183 ACGNSRDIKSGEMVHSLAIKCGVDGYPFVNNSILAVYAKCGKLSLASKCFEMMDKS---- 238
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
+ N LI YC+ G + +A+ L + G EP + +W ++ GY Q + +E M
Sbjct: 239 ETAAWNALISGYCQHGQIEEAQRLFDAMREEGIEPGLVSWNILIAGYNQLGYFDIAMELM 298
Query: 422 KKALVL 427
KK VL
Sbjct: 299 KKMEVL 304
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 114/294 (38%), Gaps = 56/294 (19%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
+L++ Y+ E A + M + K +NSM+ Y Q G K L +M++
Sbjct: 385 SLIDMYSKCGKLENAWKVFDMMPE----KDVYTWNSMIGGYCQVGYCGKAHMLFMKMQKS 440
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
+ T++ ++ D + + ME D + D + + SGY++ G DK
Sbjct: 441 ETQPNAITWNNMIWGYIHNGDEDQAMDLFRRMEEDGKIKRDTASWNSLISGYLQIGQKDK 500
Query: 277 ALAVLRKSEVLMMH-NKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVI 335
AL++ R+ + ++ N + +++ AC N LK+ + CVI
Sbjct: 501 ALSIFRQMQSFSININSVT-----ILSVLPACAN-----------LIALKMVKEIHGCVI 544
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
RNL + I N LID Y + G + + T+ +A +
Sbjct: 545 --------------------RRNLDSLLPITNSLIDTYAKSGNIGYSRTIFDRALFK--- 581
Query: 396 PNVRTWYLMATGYLQNNQSEKG---VEAMKKALVLLEAGTRWKPSKECLAACLG 446
+ TW + GY+ S+ V+ MKK + KP++ + G
Sbjct: 582 -DFITWNSLIAGYVLFGCSDAALGLVDQMKKLGI--------KPNRSTFSLAFG 626
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 120 ADVAIRLDLI---AKVQG------IEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSA 168
+DV ++ D+ A ++G +E A FN + + P+ V+ L++A+ +
Sbjct: 247 SDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNV 306
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
+ Q MR RG++ + YN+++N + N K +S++ EM+ G+ DK T++ L
Sbjct: 307 NAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTL 366
Query: 229 LSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV 286
+ C DG+ +D + + + A++ V LD Y SG KAG A VLR+
Sbjct: 367 IDGC--CKDGK-LDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLRE--- 420
Query: 287 LMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-------YICVIS 336
MM + Y VI + K DV +K K+ + N+G Y +++
Sbjct: 421 -MMEAALEPDNTTYTMVIDAFC---RKGDVKTGFKLLKE---MQNKGKKPGVVTYNVIMN 473
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
L K M++A+ + + + D N L+D C+ G + +E L
Sbjct: 474 GLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEEL 522
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 118/268 (44%), Gaps = 11/268 (4%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P VY AL+ + E A + +MRD G+ + + ++++ + + GN L
Sbjct: 253 PDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDL 312
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+M +G+ D ++ L++ A + + + IV M+ + G+ D Y T G
Sbjct: 313 YQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMK-NAGLKPDKVTYTTLIDGCC 371
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQ-NLK 325
K G D A+ + +K M + S Y +I+ + G D RV + + L+
Sbjct: 372 KDGKLDMAMDIKQK----MAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALE 427
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
N Y VI + + +++ K+ +E +++ + N +++ C+ G + A+ L
Sbjct: 428 PDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADML 487
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
++ G P+ T+ ++ G ++ +
Sbjct: 488 LHAMLNIGVSPDDITYNILLDGQCKHGK 515
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 120/287 (41%), Gaps = 22/287 (7%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V + L++ A+ + + + ++M D G+ Y +++ + +TG + +
Sbjct: 218 PTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKM 277
Query: 210 MHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+EM + G++ + F+ L+ A C + G+D M RGV+ D Y +G
Sbjct: 278 FNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRV--RGVMPDLVAYNALVNGL 335
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL---- 324
+A A +++ + M N + T KD L + KQ +
Sbjct: 336 CRARNLKAAESIVEE-----MKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKE 390
Query: 325 -KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
+ Y +IS L K AE++ E L D +IDA+CR+G +
Sbjct: 391 VSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGF 450
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA 430
L+ + Q +G +P V T+ ++ G + Q MK A +LL A
Sbjct: 451 KLLKEMQNKGKKPGVVTYNVIMNGLCKLGQ-------MKNADMLLHA 490
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 12/122 (9%)
Query: 153 SVYIALLNAYACAKSAEKAEI-IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
+ Y +++A+ C K K ++++M+++G + YN +MN + G K D L+H
Sbjct: 431 TTYTMVIDAF-CRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLH 489
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA---MMEADRGVVLDWTVYATAASGY 268
M G+ D T++ILL DG+ VA +E+ +G+V D+ VY + S
Sbjct: 490 AMLNIGVSPDDITYNILL-------DGQCKHGKVANSEELESSKGMVPDFAVYTSLISEL 542
Query: 269 VK 270
K
Sbjct: 543 AK 544
>gi|414880641|tpg|DAA57772.1| TPA: hypothetical protein ZEAMMB73_835994 [Zea mays]
Length = 728
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 146/338 (43%), Gaps = 22/338 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V AL+N + ++A II +M RG+ T Y ++M Y ++ ++ + L EM
Sbjct: 349 VGAALINIFCSDGLKKEALIIQSEMEKRGIASNTSIYETLMKAYCKSNQIEEAEGLFVEM 408
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK--- 270
+EK + T++IL+ A + E ++ ++ M+ D G+ Y S Y +
Sbjct: 409 KEKSLQATTTTYNILMDAYSRRLQTEVVESLLLEMQ-DLGIRPSARSYNCLISAYGRQKK 467
Query: 271 -AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYN 328
+G ++ A +++ + S +Y+ ++ YAA G + ++ K + LK
Sbjct: 468 MSGKAENAFLRMKRDGI----KPLSSSYNALLFAYAANGLHEKAHAIYMDMKREGLKPTL 523
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWES--RNLCHDIRIPNHL-IDAYCRRGLLHKAETL 385
Y ++ +L + EK+ E W++ R+ H+ ID + GL + +
Sbjct: 524 ETYTALLDTLRRAG---DTEKLMETWKTMVDEKFGGTRVIFHMVIDCLAKHGLYLQVRDV 580
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACL 445
IY+ G +P V T+ ++ Y + Q K + +K+ L KP +
Sbjct: 581 IYEFGKMGLKPTVMTYNILMNAYGRGGQHYKLPQLLKEMTAL-----ELKPDSITYCTMI 635
Query: 446 GYYKKERDIEGADYFIK-LLTGKEIISADLQDRLLNNI 482
Y + RD A Y+ K ++ +I +LLN +
Sbjct: 636 YAYARVRDFSRAFYYHKQMVRNGQIPDPRSYKKLLNTL 673
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 130/306 (42%), Gaps = 5/306 (1%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDR 181
+ L+ A++ IE A F + E +P+ Y LL Y ++ + +M+
Sbjct: 324 VLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVS 383
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
YN++++V+ + G +K++ +L H+M E+ ++ + T+ L+ AC +
Sbjct: 384 NTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDA 443
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVI 301
KI+ M +++G++ Y Y +A + ++AL L M Y+ +I
Sbjct: 444 KKILLHM-SEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNE-MGSKPTIETYNTLI 501
Query: 302 TQYAACG-NKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
+A G K+ + K + + VI + E A K + E E L
Sbjct: 502 YMFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLV 561
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
D R ++ YC GL+ ++ + + G PNV + +M Y ++++ + E
Sbjct: 562 PDERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAYEL 621
Query: 421 MKKALV 426
+ + L
Sbjct: 622 LDEMLT 627
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 153/401 (38%), Gaps = 59/401 (14%)
Query: 75 VEEGR-PLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKS--NFVLTPADVAIRLDLIAK 131
VE+G+ D+E L I K L R S A + ++ K S +F L + A R D
Sbjct: 69 VEKGKYSYDVETL--INKLSSLPPRGSIARCLDVFKNKLSLNDFALVFKEFAQRGDWQRS 126
Query: 132 VQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYN 191
++ + C P + +Y +++ EK I ++M G+ + Y
Sbjct: 127 LRLFKHMQRQIWCKPNE----HIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYT 182
Query: 192 SMMNVYYQTGNY------------------------------------KKLDSLMHEMEE 215
+++N Y + G Y + L L EM
Sbjct: 183 ALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAEMRH 242
Query: 216 KGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
+GI D T++ LL AC+ G+ + + M + GVV D T Y + K D
Sbjct: 243 EGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMN-EGGVVPDITTYTYLVDTFGKLNRLD 301
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVI 335
K +L++ + S +Y+ ++ YA GN +D V++ ++ V N ++
Sbjct: 302 KVSELLKEMASTGNVPEIS-SYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSIL 360
Query: 336 SSLLKFDG-MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
L G + ++F E + N D N LID + G + TL +
Sbjct: 361 LGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENV 420
Query: 395 EPNVRTW----YLMATGYLQNN-------QSEKGVEAMKKA 424
EPN+ T+ + G L ++ SEKG+ KA
Sbjct: 421 EPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKA 461
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 115/274 (41%), Gaps = 14/274 (5%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
L+N Y A + MR G+ Y ++++ Y + + + + EME +G
Sbjct: 198 LVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEG 257
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDW----TVYATAASGYVKAGL 273
+ + T+S+++S D E ++ R + +W +Y Y KAG
Sbjct: 258 VSPNAATYSVIISGYGRLGDVEAAERWF-----QRALSENWHHNDVIYNNIIHAYCKAGN 312
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK----QNLKVYNR 329
++A A++ E + Y+ ++ Y C D L V++R K L
Sbjct: 313 MERAEAIMTAMEEQGLEATLG-LYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVV 371
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y C+I+ K M+ A +I E E + + H+ + + +ID Y + G A ++
Sbjct: 372 SYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDM 431
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G +P+ T+ ++ + +N Q + +E + +
Sbjct: 432 SNAGIKPDGITYNILMNAFCKNGQMNRALELLAR 465
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 120/264 (45%), Gaps = 6/264 (2%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y L++AYA A+ A +++M G+ Y+ +++ Y + G+ + +
Sbjct: 225 PNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERW 284
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+ + ++ ++ A A + E + I+ ME ++G+ +Y GYV
Sbjct: 285 FQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAME-EQGLEATLGLYNMLMDGYV 343
Query: 270 KAGLSDKALAVLR--KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKV 326
DK L V R K+ + +Y +I Y+ G D L++ + Q +K
Sbjct: 344 HCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKH 403
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
+ Y +I ++ +A +FE+ + + D N L++A+C+ G +++A L+
Sbjct: 404 NRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELL 463
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQ 410
+ + P +RT+ ++ G+++
Sbjct: 464 ARMESGDCPPTLRTYTIIIDGFMK 487
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 116/287 (40%), Gaps = 38/287 (13%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y L+N Y+ +KA I +M D+G+ Y+ +++ Y Q G+ S+
Sbjct: 368 PTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSV 427
Query: 210 MHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEAD----------------- 251
+M GI D T++IL++A C ++ + M D
Sbjct: 428 FEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMK 487
Query: 252 ----------------RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR 295
G Y G +AG D+A +++ + V +H R
Sbjct: 488 IGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPN-ER 546
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
+Y +I YA G+ + + R K+ LK Y ++ + K M+S I E
Sbjct: 547 SYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEM 606
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+ + + I N L+D + +RG + +A ++ K + G P++ ++
Sbjct: 607 AAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSY 653
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%)
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +IS + +E+AE+ F+ S N H+ I N++I AYC+ G + +AE ++ +
Sbjct: 265 YSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAME 324
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAG 431
+G E + + ++ GY+ +K + ++ E G
Sbjct: 325 EQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETG 365
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y LL+ +A +A IMQ+MR GL Y S +N + G+ K + +M
Sbjct: 617 IYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQM 676
Query: 214 EEKGIDCDKYTFSILLSACAAAS 236
+++G+ + ++ L+ A+AS
Sbjct: 677 KQQGVQPNLQAYTTLIHGWASAS 699
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 121/274 (44%), Gaps = 17/274 (6%)
Query: 134 GIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
G AS +P L Y L+ AY +K + A ++ QM +RG + Y +
Sbjct: 366 GFLDEASKKGLIPNNLS----YAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGIL 421
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
++ +G+ ++ ++ ++G+ D +++L+S + + M DR
Sbjct: 422 IHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEM-LDRN 480
Query: 254 VVLDWTVYATAASGYVKAGLSDKA-----LAVLRKSEVLMMHNKFSRAYDFVITQYAACG 308
++ D VYAT G++++G D+A L+V + +V ++H ++ +I + G
Sbjct: 481 ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH------HNAMIKGFCRSG 534
Query: 309 NKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
D+ L R + V ++ Y +I +K M +A KIF E ++
Sbjct: 535 MLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYT 594
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
LI+ +C +G AE + QLR PNV T+
Sbjct: 595 SLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTY 628
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 63/327 (19%), Positives = 130/327 (39%), Gaps = 64/327 (19%)
Query: 144 CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
C+P + Y ++ Y E A ++ ++++ +G + + +M+N + + G++
Sbjct: 236 CIPNIV----FYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDF 291
Query: 204 KKLDSLMHEMEEKGI---------------------------------DC--DKYTFSIL 228
D L+ E++E+G+ DC D T++IL
Sbjct: 292 VASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNIL 351
Query: 229 LSACAAASDGEGIDKIVAMMEADR-GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
++ +G+ + + EA + G++ + YA Y K+ D A +L L
Sbjct: 352 INR--LCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL-----L 404
Query: 288 MMHNKFSR----AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-------YICVIS 336
M + + Y +I G+ DD + + +K+ +RG Y ++S
Sbjct: 405 QMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM------KVKLIDRGVSPDAAIYNMLMS 458
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
L K A+ +F E RN+ D + LID + R G +A + + +G +
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518
Query: 397 NVRTWYLMATGYLQNNQSEKGVEAMKK 423
+V M G+ ++ ++ + M +
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNR 545
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 9/268 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY LL Y A E + ++M RG+ + Y +++ + G KK +M +M
Sbjct: 185 VYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKM 244
Query: 214 EEKGIDCDKYTFSILL-SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
E+G++ + T+++L+ S C S E + M+E +GV LD Y T +G
Sbjct: 245 MERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLE--KGVALDAVTYNTLITGLSGVL 302
Query: 273 LSDKALAVLRK---SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
D+A+ +L + E ++ N + ++ VI G +V +N N
Sbjct: 303 EMDEAMGLLEEMIHGETMVEPNVVT--FNSVIHGLCKTGRMRQAFQVRDMMAENGCACNL 360
Query: 330 -GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+ +I LL+ ++ A ++ +E S L D + LI+ +C+ + +AE+L+ K
Sbjct: 361 VTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSK 420
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ G EP + + + + E+
Sbjct: 421 MRRDGIEPELVHYIPLLAALCEQGMMEQ 448
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 96/251 (38%), Gaps = 57/251 (22%)
Query: 184 VKKTIDYNSMMNVYYQTGNYKK-----LDSLMHEMEEKGIDCDKYTFSILLSACAAASDG 238
V+ + YN+++ + G L + HE + YT +++ + CA G
Sbjct: 75 VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAV---SYT-TLMRALCAERRTG 130
Query: 239 EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYD 298
+ + + M + GV D Y T G A DKA+ +LR+
Sbjct: 131 QAVGLLRDMQAS--GVRPDVVTYGTLIRGLCDAADVDKAVELLRE--------------- 173
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
+ N+ VY+ C++ K E K+FEE R
Sbjct: 174 ----------------MCESGIEPNVVVYS----CLLQGYCKAGRWECVSKVFEEMSGRG 213
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY---------- 408
+ D+ + LID+ CR G + KA ++ K RG EPNV T+ ++
Sbjct: 214 IEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAM 273
Query: 409 -LQNNQSEKGV 418
L+NN EKGV
Sbjct: 274 SLRNNMLEKGV 284
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 100/242 (41%), Gaps = 12/242 (4%)
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ +NS+++ +TG ++ + M E G C+ TF++L+ + K +
Sbjct: 325 VVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHK---VKKAME 381
Query: 247 MME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
+M+ A G+ D Y+ +G+ K D+A ++L K M + I
Sbjct: 382 LMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSK----MRRDGIEPELVHYIPLL 437
Query: 305 AA-C--GNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
AA C G + + +N K+ Y +I + +SAE+ + L
Sbjct: 438 AALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIP 497
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
D + LI+ + G L AE ++ + G P+V + + GY +EK +E +
Sbjct: 498 DSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELI 557
Query: 422 KK 423
++
Sbjct: 558 RE 559
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N +A + AE +++QM G V ++S++ Y G+ +K+ L+ EM
Sbjct: 502 YSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMT 561
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMM--EADRGVVL 256
K I D S + + A ++G+ + + V E +G V+
Sbjct: 562 AKDIALDSKIISTIYTCLVANNEGKALLQSVPGFDTEVSKGAVI 605
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 11/245 (4%)
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIV 245
+ ++S++ + G +K L +EM K I+ D YTF+IL+ A C E + I
Sbjct: 228 VVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIA 287
Query: 246 AMMEADRGVVLDWTVYATAASGYV---KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
MM+ GV Y T GY + G + L+++ + V SR+Y+ +I
Sbjct: 288 VMMK--EGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVA----PNSRSYNIMIN 341
Query: 303 QYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
+ D+ L ++ + + + Y +I L K + A ++ +E + +
Sbjct: 342 GFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPA 401
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
DI N LID +C+ + KA L+ K + G +PN+ T+ ++ G + Q + +
Sbjct: 402 DIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVF 461
Query: 422 KKALV 426
+ L+
Sbjct: 462 QDLLI 466
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 114/282 (40%), Gaps = 45/282 (15%)
Query: 168 AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN-YKKLDSLMHEMEEKGIDCDKYTFS 226
+ A + +MR +++N ++ +T N Y + SL +ME KG+ D +T S
Sbjct: 47 VDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLS 106
Query: 227 ILLSA----------------------CAAASDGEGI---DKIVAMMEADRGVVLDWTVY 261
IL++ C E + D ++A+ G L+ Y
Sbjct: 107 ILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLAL-----GFHLNHVTY 161
Query: 262 ATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK 321
+G K G + AL VLR+ E ++ N Y +I C +K V + Y
Sbjct: 162 GILINGLCKMGQTRAALQVLRQIEGKLV-NTNVVMYSTIID--GLCKDK-LVTDAYGLYS 217
Query: 322 QNLKVYNRGYICVISSLL-------KFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
+ + + SSL+ KF + A ++F E +N+ D N L+DA C
Sbjct: 218 EMIVKRIPPTVVTFSSLIYGFCIVGKF---KDAFRLFNEMVMKNINPDAYTFNILVDALC 274
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ G + +A+ +I G EP V T+ + GY N+ K
Sbjct: 275 KEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGK 316
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 70/161 (43%), Gaps = 5/161 (3%)
Query: 119 PADVAIR---LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEI 173
PAD+ +D+ K Q +++A + + E P++ Y L++ + A+
Sbjct: 400 PADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQD 459
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ Q + +G YN M+N + G + + + L+ +ME+ GI D T+ ++ A
Sbjct: 460 VFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALF 519
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ E K++ M VV + + T + G++
Sbjct: 520 HKDENEKAQKLLREMVIKGVVVYAFEIRRTLVGRTLNLGMN 560
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 143/339 (42%), Gaps = 45/339 (13%)
Query: 76 EEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI---AKV 132
E+G P D+ +II+ R + ++ ++ + + DV + D+I AK
Sbjct: 227 EDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDKL--EVDVQLWNDIIVGFAKA 284
Query: 133 QGIEQAASYFNCVPEK---LKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
+++A + V +K ++ + C ++ E+AE I ++MRD GL +T
Sbjct: 285 GDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRT-EEAEAIFEEMRDNGLQPRTRA 343
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
YN+++ Y + G + + ++ EME G+ ++ T+S+L+ A A E ++ ME
Sbjct: 344 YNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEME 403
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN 309
A V + V++ + Y G K VLR+ E G
Sbjct: 404 AS-NVQPNAYVFSRILASYRDKGEWQKTFQVLREME--------------------DSGV 442
Query: 310 KDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
+ D R++ Y +I + KF+ ++ A F+ S + D N L
Sbjct: 443 RPD--RIF-------------YNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTL 487
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+D +C+ G +AE L + +G P T+ +M +
Sbjct: 488 VDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSF 526
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 114/254 (44%), Gaps = 6/254 (2%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQT--GNYKKLDSL 209
P Y AL++A A EKA ++ +MR+ G ++Y+ ++ + N L +
Sbjct: 199 PLTYNALISACARNNDIEKALNLICRMREDGYPSDLVNYSLIIRSLMKNNRANSSILQKI 258
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
E++ ++ D ++ ++ A A D + + + +++ G+ + T G
Sbjct: 259 YREIDRDKLEVDVQLWNDIIVGFAKAGDLDKALEFLGVVQGS-GLSVKTATLVTVIWGLG 317
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN- 328
G +++A A+ + + + +RAY+ ++ Y G D V +++ + N
Sbjct: 318 NCGRTEEAEAIFEEMRDNGLQPR-TRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNE 376
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+ Y +I + + ESA + +E E+ N+ + + + ++ +Y +G K ++ +
Sbjct: 377 QTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLRE 436
Query: 389 AQLRGTEPNVRTWY 402
+ G P+ R +Y
Sbjct: 437 MEDSGVRPD-RIFY 449
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLP--SVYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D K ++A F + EK LP + + ++N++ + + + ++ MR +GL
Sbjct: 488 VDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGL 547
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ + Y +++++Y ++G + + +M+ G+ ++ LL+A A
Sbjct: 548 LPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYA 597
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 137/305 (44%), Gaps = 20/305 (6%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
LDL+ +V G L P+V Y ++++ K +A + +M +G+
Sbjct: 210 LDLLQRVDG-------------NLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGI 256
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGID 242
+ Y+++++ + G L ++M + I D YTF+IL++A C EG
Sbjct: 257 SPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG-- 314
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
K V M +G+ ++ Y + GY +KA ++ + N ++Y +I
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGV-NPDIQSYSIMIN 373
Query: 303 QYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
+ D+ + ++K +++N+ Y +I L K + A ++ ++ R +
Sbjct: 374 GFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPP 433
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
IR N ++DA C+ + KA L+ K + +G +PN+ T+ ++ G Q+ + E +
Sbjct: 434 TIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVF 493
Query: 422 KKALV 426
+ LV
Sbjct: 494 EGLLV 498
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 116/289 (40%), Gaps = 46/289 (15%)
Query: 135 IEQAASYFNCVPEKLKLPSVY--IALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
++ A S FN + + P + +L + +K + Q+M RG+ ++ N
Sbjct: 66 VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI---DKIVAMM 248
++N + Q G S+ ++ + G D TF+ L+ C + DK+VA+
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVAL- 184
Query: 249 EADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG 308
G D Y T G K G + AL +L++ + G
Sbjct: 185 ----GFHFDQISYGTLIHGLCKVGETRAALDLLQRVD----------------------G 218
Query: 309 NKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
N + N+ +YN +I S+ K + A +F E S+ + D+ +
Sbjct: 219 N---------LVQPNVVMYNT----IIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSA 265
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
LI +C G L+ A L K L +P+V T+ ++ + ++ + ++G
Sbjct: 266 LISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 96/217 (44%), Gaps = 6/217 (2%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+ + + G D++ I+I F K+F A+ + M +K N + + +D +
Sbjct: 352 IFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRK-NIIPDVVTYSSLIDGL 410
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
+K I A + + ++ P++ Y ++L+A +KA ++ +++D+G+
Sbjct: 411 SKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNM 470
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVA 246
Y+ ++ Q+G + + + KG + + T++I++ C E + +++
Sbjct: 471 YTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEAL-ALLS 529
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
ME D G + D Y K +D A +LR+
Sbjct: 530 KME-DNGCIPDAKTYEIIILSLFKKDENDMAEKLLRE 565
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 163/375 (43%), Gaps = 27/375 (7%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D + LL++ V+ G ++ ++ F R +AL W+ ++ P DV
Sbjct: 61 DDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENAL----WLLEQMVMRGCPPDVVS 116
Query: 125 RLDLI---AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMR 179
+I K+ +++A + + ++ P+V Y L++ + + A ++++M
Sbjct: 117 YTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMT 176
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDS---LMHEMEEKGIDC--DKYTFSILLSACAA 234
+RG I YN N+ + + +KLDS L EMEE G C D +T+S ++ +
Sbjct: 177 ERGYRPNAITYN---NIMHGLCSGRKLDSALQLFKEMEESG-SCPPDVFTYSTIVDSLVK 232
Query: 235 ASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
+ + ++V M +G + Y++ G KAG D+A A+L++ M + S
Sbjct: 233 SGKVDDACRLVEAM-VSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQR----MTRSGCS 287
Query: 295 R---AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKI 350
Y+ +I + G D+ + + N Y ++ + K E A +
Sbjct: 288 PNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGL 347
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
E + ++ N L+D +C++ + +A L+ +G PNV ++ + G +
Sbjct: 348 VEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCK 407
Query: 411 NNQSEKGVEAMKKAL 425
+ +GV +++ L
Sbjct: 408 ATKVHEGVLLLEQML 422
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/276 (18%), Positives = 121/276 (43%), Gaps = 22/276 (7%)
Query: 144 CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
C P+ + Y ++N + + + A ++++M D G YN++++ + +
Sbjct: 40 CPPDSV----TYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRV 95
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--DRGVVLDWTVY 261
+ L+ +M +G D +++ +++ + +D+ +M+ RG + Y
Sbjct: 96 ENALWLLEQMVMRGCPPDVVSYTTVINGLCKL---DQVDEACRVMDKMIQRGCQPNVITY 152
Query: 262 ATAASGYVKAGLSDKALAVLRKSEVLMMHNKF-SRAYDFVITQYAACGNK--DDVLRVWK 318
T G+ + G D A+ ++RK M + A + + C + D L+++K
Sbjct: 153 GTLVDGFCRVGDLDGAVELVRK----MTERGYRPNAITYNNIMHGLCSGRKLDSALQLFK 208
Query: 319 RYKQN----LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
+++ V+ Y ++ SL+K ++ A ++ E S+ ++ + L+ C
Sbjct: 209 EMEESGSCPPDVFT--YSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLC 266
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+ G L +A L+ + G PN+ T+ + G+ +
Sbjct: 267 KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCK 302
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 11/202 (5%)
Query: 226 SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
SIL C A G+ D ++ E + D Y T +G K+ D A+ +L +
Sbjct: 15 SILRGLCDA---GQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEE-- 69
Query: 286 VLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKF 341
M+ N F+ +Y+ V+ + ++ L + ++ + Y VI+ L K
Sbjct: 70 --MVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKL 127
Query: 342 DGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
D ++ A ++ ++ R ++ L+D +CR G L A L+ K RG PN T+
Sbjct: 128 DQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITY 187
Query: 402 YLMATGYLQNNQSEKGVEAMKK 423
+ G + + ++ K+
Sbjct: 188 NNIMHGLCSGRKLDSALQLFKE 209
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/342 (19%), Positives = 129/342 (37%), Gaps = 38/342 (11%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D LL++ V+ G ++ +++ F + A+ + M +K +V
Sbjct: 307 DEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG-YVPNLFTYNS 365
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRG 182
LD+ K +E+A + + +K +P+V Y ++ A + ++++QM
Sbjct: 366 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 425
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
V + +N++++ +T L + ++E G + T++ L+ + + +
Sbjct: 426 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAE 485
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
++ M +G D Y T G K+ + RAY +
Sbjct: 486 YLLREMTRKQGCSPDIITYNTVIDGLCKS-------------------KRVDRAYKLFLQ 526
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
+ DDV Y VISSL K+ M+ A + E
Sbjct: 527 MLSDGLAPDDVT----------------YSIVISSLCKWRFMDEANNVLELMLKNGFDPG 570
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
LID +C+ G L KA ++ +G+ P+V T+ +
Sbjct: 571 AITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIF 612
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 7/277 (2%)
Query: 136 EQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
E S F + +K P+V + L+N + +KA +++QM + G V + YN++
Sbjct: 215 ELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTL 274
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
+N Y + G YK L+ M KGI+ D T+++ + ++ M +
Sbjct: 275 LNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEM- 333
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDD 312
+ + Y T +G+VK G A V + S+ + N + Y+ +I + G+ ++
Sbjct: 334 ISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVT--YNALIGGHCHVGDFEE 391
Query: 313 VLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
LR+ + L++ Y +++ L K + E A+++ E ++ LID
Sbjct: 392 ALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLID 451
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
C+ G+L +A L+ G P+V T+ + G+
Sbjct: 452 GLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGF 488
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 8/243 (3%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+AE + M GLV +I Y+ ++N Y G+ S +M + G +T+ LL
Sbjct: 566 EAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLL 625
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
+ K + + G V D +Y T + K+G +A+A+ K ++
Sbjct: 626 KGLCKGGNLVEAKKFLNRLHYIPGAV-DSVMYNTLLAETCKSGNLHEAVALFDK---MVQ 681
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVW----KRYKQNLKVYNRGYICVISSLLKFDGME 345
+N +Y + C V V + L + Y C++ L K +
Sbjct: 682 NNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPK 741
Query: 346 SAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
+A FEE + C D N +ID+ RRG + KA + G PN+ T+ ++
Sbjct: 742 AAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILL 801
Query: 406 TGY 408
G+
Sbjct: 802 HGF 804
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 101/258 (39%), Gaps = 9/258 (3%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N + A + +M L + YN+++ + G++++ L+ ME
Sbjct: 341 YNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHME 400
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
G+ ++ T+ LL+ E +++ M + +V+ Y G K G+
Sbjct: 401 AAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVND-MVVGHIAYTVLIDGLCKNGML 459
Query: 275 DKALAV---LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRG 330
D+A+ + + K V N Y +I + GN + R Y+ L +
Sbjct: 460 DEAVQLVGNMYKDGV----NPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKII 515
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I + + + A K++ D N L+ + CR G L +AE +
Sbjct: 516 YSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMS 575
Query: 391 LRGTEPNVRTWYLMATGY 408
G PN T+ + GY
Sbjct: 576 RIGLVPNSITYDCIINGY 593
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 130/322 (40%), Gaps = 15/322 (4%)
Query: 91 KKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLK 150
+KF L KR ++++ + V+ + +D + K +++A + +
Sbjct: 422 EKFELAKRLLERMRVN-------DMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGV 474
Query: 151 LPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
P V Y +L+N + + + A+ I+ +M GLV I Y++++ + Q GN +
Sbjct: 475 NPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMK 534
Query: 209 LMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
+ M G D +T ++L+S+ C GE +K + M + G+V + Y +G
Sbjct: 535 VYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEA-EKFLCHM-SRIGLVPNSITYDCIING 592
Query: 268 YVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKV 326
Y G A + H F Y ++ GN + + R + V
Sbjct: 593 YGSIGDPLNAFSFFDDMIKCGQHPSFF-TYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAV 651
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
+ Y +++ K + A +F++ N+ D + L+ CR+G A L
Sbjct: 652 DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLF 711
Query: 387 YKAQLRGT-EPNVRTWYLMATG 407
A RGT PN + + G
Sbjct: 712 GTAMGRGTLFPNHVMYTCLVDG 733
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 113/305 (37%), Gaps = 42/305 (13%)
Query: 114 NFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIA--LLNAYACAKSAEKA 171
N + + D+ IR+ L K I+ A F V PSVY +L + K E
Sbjct: 160 NSIPSVFDLLIRVYL--KEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELV 217
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS- 230
+ ++M D+G+ +N ++N GN KK +L+ +MEE G T++ LL+
Sbjct: 218 WSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNW 277
Query: 231 ACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH 290
C I+ I M+ +G+ D Y S KA +L+K M+
Sbjct: 278 YCKKGRYKAAIELIDYMI--CKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMI- 334
Query: 291 NKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKI 350
N YN +I+ +K + A ++
Sbjct: 335 ------------------------------SPNEVTYNT----LINGFVKEGKIGVAAQV 360
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
F E +L + N LI +C G +A L+ + G N T+ + G +
Sbjct: 361 FNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCK 420
Query: 411 NNQSE 415
+ + E
Sbjct: 421 HEKFE 425
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 100/258 (38%), Gaps = 45/258 (17%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
L+N Y+ + KA ++ M G+ YN + N + +++ ++HEM E G
Sbjct: 870 LINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENG 929
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAAS----GYVKAGL 273
+ + L++ D +G K+ MEA L + + A S G + G
Sbjct: 930 VIPKHAQYITLINGMCRVGDIQGAFKLKDEMEA-----LGFGSHEVAESAMVRGLLHCGK 984
Query: 274 SDKALAVLRK-----------SEVLMMHNKFSRAYDFVITQ-------YAACGNKDDVLR 315
++ A+ VL + +MH +F R D I + CG K DV+
Sbjct: 985 TEDAMLVLDHMLRMRLLPTIATFTTLMH-RFCR--DAKIAEALKLKGVMELCGLKLDVV- 1040
Query: 316 VWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
Y +I + +A +++EE R+LC +I L+DA
Sbjct: 1041 --------------AYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISA 1086
Query: 376 RGLLHKAETLIYKAQLRG 393
L + E L+ Q RG
Sbjct: 1087 ANNLIQGEKLLTDLQERG 1104
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 72/180 (40%), Gaps = 24/180 (13%)
Query: 260 VYATAASGYVKAGLSDKALAVLRK---------------SEVLMMHNKFSRAYDFVITQY 304
+Y A VKA + D A ++LR + + N +D +I Y
Sbjct: 114 MYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVY 173
Query: 305 AACGNKDDVLRVWK-----RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
G D + ++ +K ++ N +++S++K E +F E + +
Sbjct: 174 LKEGMIDYAVETFELVGLVGFKPSVYTCNM----ILASMVKDKRTELVWSLFREMSDKGI 229
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
C ++ N LI+ C G L KA L+ + + G P + T+ + Y + + + +E
Sbjct: 230 CPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIE 289
>gi|147791423|emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]
Length = 340
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 126/304 (41%), Gaps = 11/304 (3%)
Query: 163 ACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDK 222
A AK E I++ + + + +M +Y + G ++ L E + ++C++
Sbjct: 29 AKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAHKLFDEXPK--LNCER 86
Query: 223 --YTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV 280
+F+ LLS C + + ID + + GVV D Y + + + G D AL+V
Sbjct: 87 TVVSFNALLSVCVXSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDSALSV 146
Query: 281 LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLL 339
L + E + + ++ ++ + G+ D ++W K+N N R Y + ++
Sbjct: 147 LDEMEKVGLEPDLI-TFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVI 205
Query: 340 KFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVR 399
+ M A ++ +E ++ + D+ N L+ +C G L +A+ Y R P VR
Sbjct: 206 SENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRW-YSEIARNELPPVR 264
Query: 400 TWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADY 459
Y+ +L EKG M L RW L L KE IE A
Sbjct: 265 ATYMTLIPFL----VEKGDFDMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATE 320
Query: 460 FIKL 463
++L
Sbjct: 321 LVEL 324
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 133/317 (41%), Gaps = 52/317 (16%)
Query: 138 AASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMN 195
A ++FN + E+ P+V + ++NA+ + +A + +++ G I YN++MN
Sbjct: 110 ALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMN 169
Query: 196 VYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC---AAASDGEGIDKIVAMMEADR 252
Y + + + L EM +KGI D TF+IL+S DG+ + K ++++
Sbjct: 170 GYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVL---- 225
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGN 309
G++ D +++ + SG AG D+A+ L M+ S A++ VI Y+ G
Sbjct: 226 GLLPDRSLFDISVSGLCWAGRLDEAMEFLMD----MLEKGLSPSIIAFNSVIAAYSQAGL 281
Query: 310 KDDVLRVWK------------------------------------RYKQNLKVYNRGYIC 333
+D +K ++ L V N +
Sbjct: 282 EDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTV 341
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
++ K + A+ ++ E E R + D+ + ID ++GL+ +A + + +G
Sbjct: 342 LLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKG 401
Query: 394 TEPNVRTWYLMATGYLQ 410
PN + + G+ +
Sbjct: 402 LIPNNFAYNSLICGFCK 418
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 113/282 (40%), Gaps = 46/282 (16%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+++A + + EK PS+ + +++ AY+ A +KA + M GL +S
Sbjct: 247 LDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSS 306
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
++ G ++ L+ +M EKG+ + F++LL D G + ME R
Sbjct: 307 LLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMER-R 365
Query: 253 GVVLDWTVYATAASGYVKAGLSDKA----LAVLRKSEVLMMHNKFSRAYDFVITQYAACG 308
G+ D ++ G K GL ++A L +LRK ++ N F AY+ +I + CG
Sbjct: 366 GIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKG---LIPNNF--AYNSLICGFCKCG 420
Query: 309 NKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
++ L++ K + R L DI N
Sbjct: 421 KLNEALKLEKVMRH----------------------------------RGLLPDIFTTNM 446
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+I C++G + A + G P++ T+ + GY +
Sbjct: 447 IIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCK 488
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 113/254 (44%), Gaps = 13/254 (5%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y +++ A+ ++AE + QQM D+G+ + Y +++ Y G +K++ +
Sbjct: 237 PNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRM 296
Query: 210 MHEMEEKGIDCDKYTFSILLS-ACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ EM G++ D +T+ +LL C E +M+ +G+ D ++Y GY
Sbjct: 297 LKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIR--KGIKPDVSIYGIILHGY 354
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYK-QNL 324
G AL+ + LM+ N S ++ V +A + + ++ + + Q L
Sbjct: 355 ATKG----ALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGL 410
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
Y +I +L K ++ AE F + + + +I + L+ C KA
Sbjct: 411 SPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGE 470
Query: 385 LIYKAQLRGTEPNV 398
L ++ +G PNV
Sbjct: 471 LFFEMVNQGIHPNV 484
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 118/322 (36%), Gaps = 51/322 (15%)
Query: 140 SYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRD---RGLVKKTIDYNSMMNV 196
S C P + Y LL + AE+A ++ M D R + YN+++N
Sbjct: 158 SELGCTPNVVS----YNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVING 213
Query: 197 YYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL 256
++ G K +L +M ++GI + T++I++ A + + + M D+GV
Sbjct: 214 FFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQM-IDKGVRP 272
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRK--------------------------SEVLMMH 290
+ Y GY+ G + + +L++ +E +
Sbjct: 273 NIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLF 332
Query: 291 NKFSR--------AYDFVITQYAACGNKDDV-----LRVWKRYKQNLKVYNRGYICVISS 337
+ R Y ++ YA G ++ L V N ++N V +
Sbjct: 333 DSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFN----IVFCA 388
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
K + A IF + + L ++ LIDA C+ G + AE + G PN
Sbjct: 389 FAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPN 448
Query: 398 VRTWYLMATGYLQNNQSEKGVE 419
+ + + G ++ EK E
Sbjct: 449 IVVFTSLVYGLCTIDKWEKAGE 470
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 96/240 (40%), Gaps = 14/240 (5%)
Query: 166 KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGI-DCDKYT 224
+ E +++++M + G + YN+++ + ++ L+H M + + C
Sbjct: 145 RVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNL 204
Query: 225 FSILLSACAAASDGEGIDKIVAMM--EADRGVVLDWTVYATAASGYVKAGLSDKALAVLR 282
S ++G+ +DK + D+G+ + Y G KA + D+A V +
Sbjct: 205 VSYNTVINGFFTEGQ-VDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQ 263
Query: 283 KSEVLMMHNKFSR----AYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISS 337
+ M +K R Y +I Y + G +V+R+ K L+ Y ++
Sbjct: 264 Q-----MIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDY 318
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
L K A K+F+ + + D+ I ++ Y +G L + + + G PN
Sbjct: 319 LCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPN 378
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 126/285 (44%), Gaps = 18/285 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+N Y + A+ I +MR + + +++N + G +K + + +M
Sbjct: 262 TYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQM 321
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+E G + D Y ++ L+ + + A G +I ++M+ G D Y Y +AGL
Sbjct: 322 QEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQ-HMGCEPDRASYNIMVDAYGRAGL 380
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK---DDVLRVWKRYKQNLKVYNRG 330
+ A AV + + + + +++ +++ Y++ GN +D+ + + +K LK
Sbjct: 381 HEDAQAVFEEMKRIGITPTM-KSHMLLLSAYSSAGNVAKCEDI--IGQMHKSGLKPDT-- 435
Query: 331 YICVISSLLKFDG----MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
V++S+L G E +F + DI N LI+ Y R G + + E L
Sbjct: 436 --FVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELF 493
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAG 431
+ EP+V TW Y + ++ +E +K +++AG
Sbjct: 494 QLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEK---MIDAG 535
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 124/314 (39%), Gaps = 13/314 (4%)
Query: 92 KFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYF------NCV 145
+ RL K++ + I W+ KS F + +D + + S + +C+
Sbjct: 128 QLRLNKKWGPIILICEWIMNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCI 187
Query: 146 PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
P + Y LL AY + EKAE + +MR GL I YN+ ++ + GN K
Sbjct: 188 PTE----DTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVK 243
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAA 265
+ H M+ G T+++L++ S I M R + +
Sbjct: 244 AVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQR-CKPNICTFTALV 302
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK 325
+ + GL +KA + + + + AY+ ++ Y+ G ++ +
Sbjct: 303 NALAREGLCEKAEEIFEQMQE-AGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGC 361
Query: 326 VYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
+R Y ++ + + E A+ +FEE + + ++ L+ AY G + K E
Sbjct: 362 EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCED 421
Query: 385 LIYKAQLRGTEPNV 398
+I + G +P+
Sbjct: 422 IIGQMHKSGLKPDT 435
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 21/232 (9%)
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
I YN +M+ Y Q YK ++S E+ E + T+++LL A + E + + A
Sbjct: 155 VIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFA 214
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK----------SEVLMMHNKFSRA 296
M G+ VY G VK G + KA+ + + M+ N + +
Sbjct: 215 EMR-KYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKE 273
Query: 297 YDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWES 356
+ Q N D +R +R K N+ + ++++L + E AE+IFE+ +
Sbjct: 274 SKSHMAQ-----NIFDEMRT-QRCKPNICTFT----ALVNALAREGLCEKAEEIFEQMQE 323
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
D+ N L+++Y R G + A + Q G EP+ ++ +M Y
Sbjct: 324 AGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAY 375
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y L+N Y A E+ E + Q + + L + + S + Y + YK+ L +
Sbjct: 471 STYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEK 530
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL 256
M + G D T +LLSAC++ E + +V M D +L
Sbjct: 531 MIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKDLKTLL 574
>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
Length = 319
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 117/263 (44%), Gaps = 24/263 (9%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+A+ I++ M ++G+ T+ Y+S+MN Y + + + M +G D +++IL+
Sbjct: 28 EAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKVFNAMITRGCIPDVLSYNILI 87
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
+ C A + +I M RG++ + Y T G+ K + L K M
Sbjct: 88 NGCCKAQRIDEAKQIFDEMSF-RGLIPNTATYNTLLGGFWKQKIQ------LFKD----M 136
Query: 290 HNKFSR----AYDFVITQYAACGNKDDVLRVWKRYKQN-----LKVYNRGYICVISSLLK 340
H + Y + + G D L +++ + N L +YN +I ++ K
Sbjct: 137 HAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYN----ILIDAMCK 192
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
+E A ++F + + L D+R +I CR GLL +A + + G P+ +
Sbjct: 193 SGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDCCS 252
Query: 401 WYLMATGYLQNNQSEKGVEAMKK 423
+ ++ G+LQNN + + + ++
Sbjct: 253 YNVIVRGFLQNNGASRAEQLFQE 275
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 131/311 (42%), Gaps = 34/311 (10%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+V+ ++++ YA A + E AE ++ + LV I YNS++ Y Q GN + +++L+ +
Sbjct: 202 AVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQ 261
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
MEE+G + ++ +L+ A D E ++ +AG
Sbjct: 262 MEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSP-----------------QAG 304
Query: 273 LSDKALAVLRKSEVL-MMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-----YKQNLKV 326
KAL +L + + + NK Y ++ YA G+ +VW+ K ++ +
Sbjct: 305 NMAKALDILEEMDKHGVSPNKM--IYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVI 362
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
YN ++ + K M+ A + E E+ L I ++D Y + G + KA +
Sbjct: 363 YN----ILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVF 418
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLG 446
+ + G P V ++ + +G + Q E + + L PS+ A
Sbjct: 419 DRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLA-----NGVVPSERIYTALTE 473
Query: 447 YYKKERDIEGA 457
Y + D+E A
Sbjct: 474 GYARTGDVEKA 484
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 118/320 (36%), Gaps = 61/320 (19%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMN------- 195
N VP + VY +++ AY A + E E ++ QM + G Y +++N
Sbjct: 231 NLVPGGI----VYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRD 286
Query: 196 ------------VYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
V Q GN K ++ EM++ G+ +K +++++ A D K
Sbjct: 287 EEKCLSFFHRLKVSPQAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFK 346
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ 303
+ M G+ D +Y + KAG DKAL VL E + Y ++
Sbjct: 347 VWEDM-VSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTI-ETYTSILDG 404
Query: 304 YAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESA--------------- 347
Y GN L V+ R K L+ Y ++S L K ME+A
Sbjct: 405 YVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPS 464
Query: 348 -----------------EK---IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
EK +F+ + NL DI L+ A C G +H A +
Sbjct: 465 ERIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQ 524
Query: 388 KAQLRGTEPNVRTWYLMATG 407
+ G + N T+ M G
Sbjct: 525 QITDAGLKHNQITYCTMLDG 544
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 133/339 (39%), Gaps = 27/339 (7%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ YA A + MR + Y S+++ Y + + + + EM
Sbjct: 134 YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML 193
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+GI ++ F ++S A+A + E + +A+ +V VY + Y +AG
Sbjct: 194 SQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAEN-LVPGGIVYNSIVQAYCQAGNM 252
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG---- 330
+ A+L + E Y V+ +A +++ L + R K + + N
Sbjct: 253 ETVEALLAQMEEEGFQGNLG-LYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAKALD 311
Query: 331 ----------------YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
Y ++ + +A K++E+ S L DI I N L+ A+C
Sbjct: 312 ILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFC 371
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRW 434
+ G + KA ++ + P + T+ + GY++ +K +E + + AG R
Sbjct: 372 KAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDR---IKTAGLR- 427
Query: 435 KPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISAD 473
P + L K R +E A + + ++ ++
Sbjct: 428 -PGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSE 465
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 118/287 (41%), Gaps = 37/287 (12%)
Query: 165 AKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYT 224
A + KA I+++M G+ + Y +M+ Y + G++ + +M G+ D
Sbjct: 303 AGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVI 362
Query: 225 FSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV---- 280
++IL+ A A + ++ +EA+R ++ Y + GYVK G KAL V
Sbjct: 363 YNILVHAFCKAGRMDKALGVLENIEANR-LLPTIETYTSILDGYVKGGNIQKALEVFDRI 421
Query: 281 ----LRKSEV-------------------LMMHNKFS-------RAYDFVITQYAACGNK 310
LR V LM++ + R Y + YA G+
Sbjct: 422 KTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYARTGDV 481
Query: 311 DDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD-IRIPNH 368
+ V++R K +NL + Y ++ + M A ++F++ L H+ I
Sbjct: 482 EKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTM 541
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
L AY R G + +AE L+ + GT+P+ + + Y + + E
Sbjct: 542 LDGAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHE 588
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 106/279 (37%), Gaps = 36/279 (12%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
LD K I++A F+ + P V Y +LL+ A A+ E A +++ +M G+
Sbjct: 402 LDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGV 461
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
V Y ++ Y +TG+ +K + M+++ + D + LL AC + G +
Sbjct: 462 VPSERIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAE 521
Query: 244 IVAMMEADRGVVLDWTVYATAASG-YVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
+ + D G+ + Y T G Y +AG ++A ++ E + Y+ +I
Sbjct: 522 VFQQI-TDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAMERDGTKPD-TLIYNSLIN 579
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
Y G +D ME+ + S+ D
Sbjct: 580 AYGVSGRHED-------------------------------MEALLAKMVKSSSKQTKPD 608
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
I N LI Y + G + +AE L P+ TW
Sbjct: 609 IGTYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTW 647
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 76/176 (43%), Gaps = 20/176 (11%)
Query: 322 QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
Q +++ + +IS E+AE FE++++ NL + N ++ AYC+ G +
Sbjct: 195 QGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMET 254
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWK------ 435
E L+ + + G + N+ + + G+ + EK + + V +AG K
Sbjct: 255 VEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAKALDILE 314
Query: 436 --------PSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLQ-DRLLNNI 482
P+K A + Y + G D+ ++++SA L+ D ++ NI
Sbjct: 315 EMDKHGVSPNKMIYAMIMDGYAR-----GGDFTAAFKVWEDMVSAGLKPDIVIYNI 365
>gi|356502612|ref|XP_003520112.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 697
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 144/313 (46%), Gaps = 18/313 (5%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
AL+N++ +A II +M +G+ I YN++M+ + ++ + + + L EM+ K
Sbjct: 325 ALINSFCVEGLRRQALIIQSEMEKKGVSSSAIVYNTLMDAFCKSNHIEAAEGLFVEMKAK 384
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA-GLSD 275
GI T++IL+ A + + ++K++ M+ D G+ + T Y Y K +SD
Sbjct: 385 GIKPIAATYNILMHAYSRRMQPKIVEKLLEEMQ-DVGLKPNATSYTCLIIAYGKQKNMSD 443
Query: 276 KAL--AVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYI 332
A A L+ +V + S++Y +I Y+ G + ++ + + +K Y
Sbjct: 444 MAAADAFLKMKKVGV--KPTSQSYTALIHAYSVSGLHEKAYAAFENMQNEGIKPSIETYT 501
Query: 333 CVISSLLKFDGMESAEKIFEEWE---SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
++++ F A+ + E W+ S + N L+D + ++GL +A +I +
Sbjct: 502 TLLNA---FRHAGDAQTLMEIWKLMISEKVEGTGATFNILVDGFAKQGLFMEAREVISEF 558
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYK 449
G +P V T+ ++ Y + Q K + +K+ VL + KP + + +
Sbjct: 559 GKVGLKPTVVTYNMLINAYARGGQHSKLPQLLKEMAVL-----KLKPDSVTYSTMIFAFV 613
Query: 450 KERDIEGADYFIK 462
+ RD A ++ K
Sbjct: 614 RVRDFRRAFFYHK 626
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 9/211 (4%)
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV 316
D VY SG + +G S+ A V E +H V + D +
Sbjct: 248 DVHVYNATISGLLSSGRSEDAWKVYESMETENIHPDHMTCSIMVTVMRELGHSAKDAWQF 307
Query: 317 WKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE-EWESRNLCHDIRIPNHLIDAYCR 375
+++ + ++ + + + +G+ I + E E + + + N L+DA+C+
Sbjct: 308 FEKMNRKGVRWSEEVLGALINSFCVEGLRRQALIIQSEMEKKGVSSSAIVYNTLMDAFCK 367
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY---LQNNQSEKGVEAMKKALVLLEAGT 432
+ AE L + + +G +P T+ ++ Y +Q EK +E M+ + A
Sbjct: 368 SNHIEAAEGLFVEMKAKGIKPIAATYNILMHAYSRRMQPKIVEKLLEEMQDVGLKPNAT- 426
Query: 433 RWKPSKECLAACLGYYKKERDIEGADYFIKL 463
S CL G K D+ AD F+K+
Sbjct: 427 ----SYTCLIIAYGKQKNMSDMAAADAFLKM 453
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 146/340 (42%), Gaps = 17/340 (5%)
Query: 102 ALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYF-NCVPEKLKLPSVYIALLN 160
AL++ W+ + + ++ L ++ K A F P VY A++
Sbjct: 203 ALEVYEWLNLRHWYSPNARMLSTILSVLGKANQEALAVEVFMRAEPSAGNTVQVYNAMMG 262
Query: 161 AYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK--LDSLMHEMEEKGI 218
YA K + ++ MR+RG + +N+++N + G L++E+ G+
Sbjct: 263 VYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGL 322
Query: 219 DCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKAL 278
D T++ L+SAC+ AS+ E K+ MEA WT Y S Y + GLS KA
Sbjct: 323 RPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWT-YNAMISVYGRCGLSGKAE 381
Query: 279 AVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-----YKQNLKVYNRGYIC 333
+ E + +Y+ ++ +A GN + V +W+ + ++ YN
Sbjct: 382 QLFNDLESRGFFPD-AVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYN----T 436
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+I K E A +++ + +S D LID+ + + +A ++ + G
Sbjct: 437 MIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTG 496
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTR 433
+P ++T+ + GY ++ K VEA + +L +G R
Sbjct: 497 VKPTLKTYSALICGYA---KAGKPVEAEETFDCMLRSGIR 533
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 122/315 (38%), Gaps = 41/315 (13%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ AL+ AYA + E+A I M G N ++ G +L ++ E+
Sbjct: 815 VWNALIEAYAASGCYERARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQEL 874
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
++ G K + ++L A A A + + KI M+A G +Y A +
Sbjct: 875 QDMGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKA-AGYFPTMHLYRVMARLLSRGKQ 933
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN---------- 323
A+L + E S ++ V+ Y A + ++V++R K++
Sbjct: 934 VRDVEAMLSEMEEAGFKPDLS-IWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYN 992
Query: 324 --LKVYNRG------------------------YICVISSLLKFDGMESAEKIFEEWESR 357
+ +Y R Y +++S K +E AE++FEE +S+
Sbjct: 993 TLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSK 1052
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
D + ++ Y G KAE L + G EP + T +L+ Y + Q +
Sbjct: 1053 GCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQ-- 1110
Query: 418 VEAMKKALVLLEAGT 432
EA K L E G+
Sbjct: 1111 -EAEKVLSNLKETGS 1124
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/119 (19%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y +L+ ++ + E+AE + ++++ +G Y++MM +Y +G++ K + L M
Sbjct: 1025 TYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMM 1084
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
++ G++ T +L+ + ++ + +K+++ ++ + G L Y++ Y++ G
Sbjct: 1085 KDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLK-ETGSNLSTLPYSSVIDAYLRNG 1142
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 10/145 (6%)
Query: 129 IAKVQGIEQAASYFNCVPEK-LKLP-SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
K Q +EQA F + K KL S Y ++ Y + S KAE + M+D G+
Sbjct: 1033 FGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPT 1092
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD-GEGIDKIV 245
+ +M Y +G ++ + ++ ++E G + +S ++ A D GI K++
Sbjct: 1093 IATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGIQKLI 1152
Query: 246 AM----MEADRGVVLDWTVYATAAS 266
M +E D + WT + AAS
Sbjct: 1153 QMKKEGLEPDHRI---WTCFIRAAS 1174
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 123/275 (44%), Gaps = 5/275 (1%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K Q +++A + + +P Y ++++ + + ++A + +++MR G+
Sbjct: 126 LCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPD 185
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ YNS+M+ + G + + M ++G+ D T+ LL A + ++
Sbjct: 186 VVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLD 245
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
+M G+ + V++ Y K ++A+ V K + N + Y VI
Sbjct: 246 LM-VRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGL-NPNAVTYGTVIDVLCK 303
Query: 307 CGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
G +D + +++ + L+ + Y +I SL FD E AE++F E R +C
Sbjct: 304 SGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIF 363
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
N +ID++C+ G + ++ L G +P++ T
Sbjct: 364 FNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 106/265 (40%), Gaps = 27/265 (10%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC--DKYTFS 226
E A + ++ RG + YN ++N ++ L+H M + G DC D ++S
Sbjct: 34 EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 227 ILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR---K 283
+++ D +DK++ D+ + + Y + + KA DKA+ VL K
Sbjct: 93 TVINGFFKEGD---LDKML-----DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 144
Query: 284 SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNRGYICVISSL 338
S V+ Y+ ++ + + G + + K+ + ++ YN ++ L
Sbjct: 145 SGVM----PDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNS----LMDYL 196
Query: 339 LKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
K A KIF+ R L DI L+ Y +G L + L+ G PN
Sbjct: 197 CKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 256
Query: 399 RTWYLMATGYLQNNQSEKGVEAMKK 423
+ ++ Y + + E+ + K
Sbjct: 257 YVFSILVCAYAKQEKVEEAMLVFSK 281
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 128/277 (46%), Gaps = 25/277 (9%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P VY L++ + ++A+ ++ M +G+ + YNS+M+ Y+ K S+
Sbjct: 175 PDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSI 234
Query: 210 MHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ M + G+ D ++SIL++ C E ++ + M + ++ + Y++ G
Sbjct: 235 FNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHH--KQIIPNVVTYSSLIDGL 292
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY-----AACGNK--DDVLRVWKRYK 321
K+G AL ++ + MH+ R I Y A C N D+ + + + K
Sbjct: 293 CKSGKISYALKLVDE-----MHD---RGQPPNIVTYSSILDALCKNHQVDNAIALLTQMK 344
Query: 322 -QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH--LIDAYCRRGL 378
Q ++ Y +I L + +E A K+FE+ + H++ + + +I +C +GL
Sbjct: 345 NQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKG--HNLNVYTYTVMIQGFCDKGL 402
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+A TL+ K + G PN +T+ ++ + +++E
Sbjct: 403 FDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENE 439
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 115/280 (41%), Gaps = 13/280 (4%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM----------NVYYQTGNYKKLD 207
L+N++ A ++ ++ G TI N+++ + + G K
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162
Query: 208 SLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
L ++M + I+ D YTF+IL+ + ++AMM +G+ Y + G
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMI-QGIKPGVVTYNSLMDG 221
Query: 268 YVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
Y +KA ++ L + ++Y +I + D+ + + K +
Sbjct: 222 YFLVKQVNKAKSIFNTMAQLGVSPDI-QSYSILINGFCKIKMMDEAMELLKEMHHKQIIP 280
Query: 328 NR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
N Y +I L K + A K+ +E R +I + ++DA C+ + A L+
Sbjct: 281 NVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALL 340
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
+ + +G +PN+ T+ ++ G Q+ + E + + LV
Sbjct: 341 TQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLV 380
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/369 (19%), Positives = 154/369 (41%), Gaps = 55/369 (14%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV-- 122
D+ + L+D G + ++K ++RF A ++ M + S DV
Sbjct: 209 DAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCS----VAPDVRS 264
Query: 123 -AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMR 179
I + +V +++A ++ + + P V + L+ ++ + A +++M+
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK 324
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
GLV + Y ++ + + G+ + + EM G D T++ LL+
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLL 384
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
+K++ ME +RGV D + T GY + G + AL +
Sbjct: 385 DAEKLLNEME-ERGVTPDLCTFTTLIHGYCRQGNFENALQLF------------------ 425
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
D +LR +R + ++ YN +I + + + A +++++ +R +
Sbjct: 426 -----------DTLLR--QRLRPDVVTYNS----LIDGMCRKGDLAKANELWDDMHAREI 468
Query: 360 CHDIRIPNH-----LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
+PNH LID++C +G + A + + +G PN+RT+ + GY ++
Sbjct: 469 -----LPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNV 523
Query: 415 EKGVEAMKK 423
+KG + ++K
Sbjct: 524 KKGQQFLQK 532
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 107/267 (40%), Gaps = 11/267 (4%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
L++A A + A ++ M +RGL + YNS++ + + K + M++
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCS 257
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
+ D +F+IL+ + + K M+ R V D ++ + + G D A
Sbjct: 258 VAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQ-HRYVTPDVVSFSCLIGLFSRRGEMDHA 316
Query: 278 LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-----QNLKVYNRGYI 332
A LR+ + L + Y VI + G+ + LRV ++ YN
Sbjct: 317 GAYLREMKGLGLVPD-GVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYN---- 371
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+++ L K + AEK+ E E R + D+ LI YCR+G A L +
Sbjct: 372 TLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQ 431
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVE 419
P+V T+ + G + K E
Sbjct: 432 RLRPDVVTYNSLIDGMCRKGDLAKANE 458
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 82/162 (50%), Gaps = 7/162 (4%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+E A + + + +K LP++ Y +++ Y + + +K + +Q+MR + I +N+
Sbjct: 488 VEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNT 547
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+++ Y + N ++ + ME++ + D T++++++ + + + ++ M D
Sbjct: 548 LIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGM-GDS 606
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
G+ D Y + +G+V AG S +A + + M+H F+
Sbjct: 607 GIEPDRYTYMSLINGHVTAGNSKQAFQLHDE----MIHRGFA 644
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 89/207 (42%), Gaps = 8/207 (3%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
LL++ E G D+ +I + F +ALQ+ + ++ L P V +D
Sbjct: 389 LLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQR---LRPDVVTYNSLID 445
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+ + + +A ++ + + LP+ Y L++++ E A + +M +G +
Sbjct: 446 GMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLP 505
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
YNS++ Y ++GN KK + +M + + D TF+ L+ + G +
Sbjct: 506 NIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVF 565
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAG 272
+ME + V D Y +G+ + G
Sbjct: 566 NIMEKEM-VRPDAVTYNMIINGFSEQG 591
>gi|357487731|ref|XP_003614153.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515488|gb|AES97111.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 691
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 141/309 (45%), Gaps = 11/309 (3%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
AL+ ++ +A II +M +G+ I YN++M+ Y ++ ++ + L EM+ K
Sbjct: 324 ALIKSFCVEGLLSEALIIQSEMEKKGISSNAIVYNTLMDAYCKSNRVEEAEGLFVEMKAK 383
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA-GLSD 275
GI TF+IL+ A + + ++ ++A M+ D G+ + Y S Y + +SD
Sbjct: 384 GIKPTAVTFNILMYAYSRRMQPKIVESLLAEMK-DFGLKPNANSYTCLISAYGRQKKMSD 442
Query: 276 KAL-AVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYIC 333
A A L+ +V + S +Y +I Y+ G + V++ ++ +K Y
Sbjct: 443 MAADAFLKMKKVGI--KPTSHSYTAMIHAYSVSGWHEKAYAVFENMIREGIKPSIETYTT 500
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
++ + + E+ KI++ S + N L+D + ++GL +A +I + G
Sbjct: 501 LLDAFRRVGDTETLMKIWKLMMSEKVKGTQVTFNILVDGFAKQGLFMEARDVISEFGKIG 560
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERD 453
+P V T+ ++ Y + G+++ L+ R +P + + + + RD
Sbjct: 561 LQPTVMTYNMLINAYARG-----GLDSNIPQLLKEMEALRLRPDSITYSTVIYAFVRVRD 615
Query: 454 IEGADYFIK 462
+ A ++ K
Sbjct: 616 FKRAFFYHK 624
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 83/196 (42%), Gaps = 26/196 (13%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y A+++AY+ + EKA + + M G+ Y ++++ + + G+ + L + M
Sbjct: 463 YTAMIHAYSVSGWHEKAYAVFENMIREGIKPSIETYTTLLDAFRRVGDTETLMKIWKLMM 522
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDW---------TVYATAA 265
+ + + TF+IL+ +G K MEA R V+ ++ Y
Sbjct: 523 SEKVKGTQVTFNILV---------DGFAKQGLFMEA-RDVISEFGKIGLQPTVMTYNMLI 572
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLK 325
+ Y + GL +L++ E L + S Y VI + D R + +K+ +K
Sbjct: 573 NAYARGGLDSNIPQLLKEMEALRLRPD-SITYSTVIYAFVRV---RDFKRAFFYHKEMVK 628
Query: 326 VYNRGYICVISSLLKF 341
GY+ ISS K
Sbjct: 629 ---SGYVMDISSYRKL 641
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 129/289 (44%), Gaps = 17/289 (5%)
Query: 122 VAIRLDLIAKVQGIEQAASYFN------CVPEKLKLPSVYIALLNAYACAKSAEKAEIIM 175
V I +D + K Q +++A + F C P+++ + +L++ + A +
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI----TFCSLIDGLGKVGRVDDAYKVY 470
Query: 176 QQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAA 235
++M D +I Y S++ ++ G + + +M + D + + A
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 530
Query: 236 SDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL--RKSEVLMMHNKF 293
+ E + ++A R V D Y+ G +KAG +++ + K + ++
Sbjct: 531 GEPEKGRAMFEEIKARR-FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLD--- 586
Query: 294 SRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
+RAY+ VI + CG + ++ + K + + Y VI L K D ++ A +FE
Sbjct: 587 TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE 646
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
E +S+ + ++ I + LID + + G + +A ++ + +G PN+ TW
Sbjct: 647 EAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTW 695
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 114/256 (44%), Gaps = 10/256 (3%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y L+ A++ ++ + QQM++ G + +++ + + G SL+ E
Sbjct: 169 SAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDE 228
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M+ +D D +++ + + + K +EA+ G+ D Y + KA
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN-GLKPDEVTYTSMIGVLCKAN 287
Query: 273 LSDKALAVLRKSEVLMMHNK---FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
D+A+ + E N+ + AY+ +I Y + G D+ + +R + + +
Sbjct: 288 RLDEAVEMFEHLE----KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV 343
Query: 330 -GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y C+++ L K ++ A K+FEE + ++ ++ N LID CR G L A L
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 389 AQLRGTEPNVRTWYLM 404
Q G PNVRT +M
Sbjct: 403 MQKAGLFPNVRTVNIM 418
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 69/356 (19%), Positives = 140/356 (39%), Gaps = 26/356 (7%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D+ L D + G ++ + I++ + ++ A + M K V TP ++
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK---VCTPDEITF 450
Query: 125 --RLDLIAKVQGIEQAASYF------NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQ 176
+D + KV ++ A + +C + VY +L+ + E I +
Sbjct: 451 CSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSI----VYTSLIKNFFNHGRKEDGHKIYK 506
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
M ++ N+ M+ ++ G +K ++ E++ + D ++SIL+ A
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA 296
++ M+ ++G VLD Y G+ K G +KA +L + +
Sbjct: 567 FANETYELFYSMK-EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV-T 624
Query: 297 YDFVITQYAACGNKDDVLRVW-----KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
Y VI A D+ ++ KR + N+ +Y+ +I K ++ A I
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS----LIDGFGKVGRIDEAYLIL 680
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
EE + L ++ N L+DA + +++A + PN T+ ++ G
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILING 736
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 81/416 (19%), Positives = 150/416 (36%), Gaps = 89/416 (21%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
DS + LLD+ D+ + I F + A + + L P +V
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG---LKPDEVTY 276
Query: 125 R--LDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRD 180
+ ++ K +++A F + + ++P Y ++ Y A ++A ++++ R
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC--DKYTFSILLSA-CAAA-- 235
+G + I YN ++ + G K+D + EE D + T++IL+ C A
Sbjct: 337 KGSIPSVIAYNCILTCLRKMG---KVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKL 393
Query: 236 -----------------------------SDGEGIDKIVAMMEA-DRGVVL-DWTVYATA 264
+ +D+ AM E D V D + +
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWK--- 318
G K G D A V K M+ + S Y +I + G K+D +++K
Sbjct: 454 IDGLGKVGRVDDAYKVYEK----MLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
Query: 319 --RYKQNLKVYN-------------------------------RGYICVISSLLKFDGME 345
+L++ N R Y +I L+K
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569
Query: 346 SAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
++F + + D R N +ID +C+ G ++KA L+ + + +G EP V T+
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 128/262 (48%), Gaps = 16/262 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++ A++NA+ ++ E+A QM RGLV + +N+++ + ++ ++K + +E
Sbjct: 97 IHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE- 155
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ + D Y+F I++ C + +++ ME + G+ + VY T G K G
Sbjct: 156 TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQME-EMGLSPNVVVYTTLIDGCCKNGD 214
Query: 274 SDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-----QNLKVY 327
++ + K E+ ++ N+++ Y +I + G K D + ++++ K N+ Y
Sbjct: 215 IERGKQLFYKMGELDVVANQYT--YTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 272
Query: 328 NRGYICVISSLLKFDG-MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
N IC + DG + +A ++F+E R + ++ N LI C+ + +AE L+
Sbjct: 273 NS-MICRCCN----DGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLM 327
Query: 387 YKAQLRGTEPNVRTWYLMATGY 408
+ + G PN+ ++ + GY
Sbjct: 328 CRMKRDGLSPNLISYNTLIDGY 349
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 111/270 (41%), Gaps = 3/270 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N + + + ++M+ G+V YNSM+ G L EM
Sbjct: 237 YTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMR 296
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
E+G+ C+ T++ L+ ++++ M+ D G+ + Y T GY G
Sbjct: 297 ERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD-GLSPNLISYNTLIDGYCSIGNL 355
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYIC 333
DKA ++ + + + Y+ +I ++ N V + + + + L Y
Sbjct: 356 DKASSLFNQMKSSGQSPSLA-TYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTI 414
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
++ +L++ D +E A +I+ E L DI I LI C G + +A L
Sbjct: 415 LMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMH 474
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+PN + M GY + S + + +K+
Sbjct: 475 LKPNDVIYNTMIYGYCKEGSSYRALRLLKE 504
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 99/247 (40%), Gaps = 36/247 (14%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+ + +AE +M +M+ GL I YN++++ Y GN K SL ++M+
Sbjct: 307 YNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMK 366
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
G T++IL++ + A + G+ +V MEA RG+ Y V++
Sbjct: 367 SSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEA-RGLSPSKVTYTILMDALVRSDNI 425
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
+KA + E K D I Y +
Sbjct: 426 EKAFQIYSSME------KAGLVADIYI-----------------------------YGVL 450
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I L M+ A K+F+ + +L + I N +I YC+ G ++A L+ + G
Sbjct: 451 IHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGM 510
Query: 395 EPNVRTW 401
PNV ++
Sbjct: 511 VPNVASY 517
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + +++A+S FN + + PS+ Y L+ ++ AK++ ++++M RGL
Sbjct: 346 IDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGL 405
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ Y +M+ ++ N +K + ME+ G+ D Y + +L+ D + K
Sbjct: 406 SPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASK 465
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
+ ++ + + + +Y T GY K G S +AL +L++
Sbjct: 466 LFKSLD-EMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKE 504
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 132/315 (41%), Gaps = 52/315 (16%)
Query: 138 AASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMN 195
A ++FN + E+ P+V + ++NA+ + +A + +++ G I YN++MN
Sbjct: 320 ALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMN 379
Query: 196 VYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC---AAASDGEGIDKIVAMMEADR 252
Y + + + L EM +KGI D TF+IL+S DG+ + K ++++
Sbjct: 380 GYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVL---- 435
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGN 309
G++ D +++ + SG AG D+A+ L M+ S A++ VI Y+ G
Sbjct: 436 GLLPDRSLFDISVSGLCWAGRLDEAMEFLMD----MLEKGLSPSIIAFNSVIAAYSQAGL 491
Query: 310 KDDVLRVWK------------------------------------RYKQNLKVYNRGYIC 333
+D +K ++ L V N +
Sbjct: 492 EDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTV 551
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
++ K + A+ ++ E E R + D+ + ID ++GL+ +A + + +G
Sbjct: 552 LLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKG 611
Query: 394 TEPNVRTWYLMATGY 408
PN + + G+
Sbjct: 612 LIPNNFAYNSLICGF 626
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 112/280 (40%), Gaps = 46/280 (16%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+++A + + EK PS+ + +++ AY+ A +KA + M GL +S
Sbjct: 457 LDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSS 516
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
++ G ++ L+ +M EKG+ + F++LL D G + ME R
Sbjct: 517 LLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMER-R 575
Query: 253 GVVLDWTVYATAASGYVKAGLSDKA----LAVLRKSEVLMMHNKFSRAYDFVITQYAACG 308
G+ D ++ G K GL ++A L +LRK ++ N F AY+ +I + CG
Sbjct: 576 GIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKG---LIPNNF--AYNSLICGFCKCG 630
Query: 309 NKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
++ L++ K + R L DI N
Sbjct: 631 KLNEALKLEKVMRH----------------------------------RGLLPDIFTTNM 656
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+I C++G + A + G P++ T+ + GY
Sbjct: 657 IIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGY 696
>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 627
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 123/275 (44%), Gaps = 5/275 (1%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K Q +++A + + +P Y ++++ + + ++A + +++MR G+
Sbjct: 126 LCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPD 185
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ YNS+M+ + G + + M ++G+ D T+ LL A + ++
Sbjct: 186 VVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLD 245
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
+M G+ + V++ Y K ++A+ V K + N + Y VI
Sbjct: 246 LM-VRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGL-NPNAVTYGTVIDVLCK 303
Query: 307 CGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
G +D + +++ + L+ + Y +I SL FD E AE++F E R +C
Sbjct: 304 SGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIF 363
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
N +ID++C+ G + ++ L G +P++ T
Sbjct: 364 FNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 115/274 (41%), Gaps = 24/274 (8%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ L+ AYA + E+A ++ +MR +GL + Y ++++V ++G + +M
Sbjct: 258 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 317
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG- 272
++G+ D ++ L+ + E +++ M DRG+ L + + + K G
Sbjct: 318 IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEM-LDRGICLSTIFFNSIIDSHCKEGR 376
Query: 273 ------LSDKALAVLRKSEVLMM----------HNKFSRAYDFVITQYAACGNKDDVLRV 316
L D + + K +++ + ++ F Y F+ T + G+K+ V
Sbjct: 377 VIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIY-FIFTNMSNTGDKEKETPV 435
Query: 317 WKRYKQNLKVYNRG-----YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
+ G Y ++ L K + A ++F+ +L + R N +ID
Sbjct: 436 NTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMID 495
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
A + G +A+ L G PN T+ LMA
Sbjct: 496 ALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMA 529
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 106/265 (40%), Gaps = 27/265 (10%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC--DKYTFS 226
E A + ++ RG + YN ++N ++ L+H M + G DC D ++S
Sbjct: 34 EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 227 ILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR---K 283
+++ D +DK++ D+ + + Y + + KA DKA+ VL K
Sbjct: 93 TVINGFFKEGD---LDKML-----DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 144
Query: 284 SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNRGYICVISSL 338
S V+ Y+ ++ + + G + + K+ + ++ YN ++ L
Sbjct: 145 SGVM----PDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNS----LMDYL 196
Query: 339 LKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
K A KIF+ R L DI L+ Y +G L + L+ G PN
Sbjct: 197 CKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 256
Query: 399 RTWYLMATGYLQNNQSEKGVEAMKK 423
+ ++ Y + + E+ + K
Sbjct: 257 YVFSILVCAYAKQEKVEEAMLVFSK 281
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 138/342 (40%), Gaps = 44/342 (12%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV--AI 124
M LLD V G + I++ + ++ A+ + M ++ L P V
Sbjct: 240 MHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG---LNPNAVTYGT 296
Query: 125 RLDLIAKVQGIEQAASYF-NCVPEKLKLPS-VYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+D++ K +E A YF + E L+ S VY +L+++ EKAE + +M DRG
Sbjct: 297 VIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRG 356
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ TI +NS+++ + + G + L M G+ D T L +
Sbjct: 357 ICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRFLGS----------- 405
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK---FSRAYDF 299
A R L +Y + G +K V ++ F Y+
Sbjct: 406 -------ARRDYSLFVNIYFI-FTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNI 457
Query: 300 VITQYAACGNK--DDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWES 356
++ + C NK DD LR+++ +LK+ R + +I +LLK + A+ +F + S
Sbjct: 458 IL--HGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSS 515
Query: 357 RNLCHDIRIPNH-----LIDAYCRRGLLHKAETLIYKAQLRG 393
L +PN+ + + +GLL + + L + G
Sbjct: 516 NGL-----VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 552
>gi|449436321|ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
gi|449514880|ref|XP_004164505.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
Length = 477
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 124/281 (44%), Gaps = 35/281 (12%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID-YNSMMNVYYQTGNYKKLDSLMHE 212
Y LL K E+A ++ + M GL K +ID Y ++++ Y Q+G K S + E
Sbjct: 129 TYTKLLMLLGKCKQPEQASLLFEIMFSEGL-KPSIDVYTALVSAYGQSGLLHKAISTVDE 187
Query: 213 MEEKGIDC--DKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
M+ DC D +T+SIL+ C + + KI+A M G+ + Y T +G+ K
Sbjct: 188 MKSIS-DCKPDVHTYSILIDCCTRLRRFDLLKKILADMSC-LGITCNTVTYNTIINGFGK 245
Query: 271 AGLSDKALAVLRK-------SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ- 322
A + ++ ++L + L+ N F RAY GN + + ++ K YK+
Sbjct: 246 AKMFEQMESLLLEMIESDSCPPDLITFNTFIRAY----------GNSEQIEKMEKWYKEF 295
Query: 323 -------NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
++ YN +ISS K + + + E R I N +ID++ R
Sbjct: 296 QLMGIEPDIWTYNS----MISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSFGR 351
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
G + + E + +G +PN T+ + Y ++ EK
Sbjct: 352 AGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEK 392
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 126 LDLIAKVQGIEQAASYF-NCVPEKLKLPSV-YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + IE+ YF N + +K SV Y +L+NAY + EK + I++Q+ + +
Sbjct: 346 IDSFGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDV 405
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAA 234
V T +N ++NVY Q GN +K+ L EM+E D TF+ ++ A A
Sbjct: 406 VPDTPLFNCLINVYGQAGNVRKMGELFLEMKENKCVPDGITFATMIRALKA 456
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/144 (19%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Query: 136 EQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
++ S N + ++ P++ +++++ A + E+ E + M+ +G+ ++ Y S+
Sbjct: 321 DKMKSVLNFMEKRFFSPTIVTMNTIIDSFGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSL 380
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
+N Y ++G+ +K+DS++ ++E + D F+ L++ A + + ++ M+ ++
Sbjct: 381 VNAYGKSGDLEKVDSILRQIENSDVVPDTPLFNCLINVYGQAGNVRKMGELFLEMKENK- 439
Query: 254 VVLDWTVYATAASGYVKAGLSDKA 277
V D +AT G+++ A
Sbjct: 440 CVPDGITFATMIRALKAQGMTEDA 463
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
+C P+ + + + AY ++ EK E ++ + G+ YNSM++ Y + G
Sbjct: 264 SCPPDLI----TFNTFIRAYGNSEQIEKMEKWYKEFQLMGIEPDIWTYNSMISSYGKAGM 319
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
Y K+ S+++ ME++ T + ++ + A + E +++ M+ +G+ + Y
Sbjct: 320 YDKMKSVLNFMEKRFFSPTIVTMNTIIDSFGRAGNIEEMEEYFKNMKF-QGMKPNSVTYC 378
Query: 263 TAASGYVKAGLSDKALAVLRK---SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR 319
+ + Y K+G +K ++LR+ S+V+ + ++ +I Y GN + ++
Sbjct: 379 SLVNAYGKSGDLEKVDSILRQIENSDVV----PDTPLFNCLINVYGQAGNVRKMGELFLE 434
Query: 320 YKQNLKVYNRGYICVISSLLKFDGM-ESAEKI 350
K+N V + + LK GM E A+++
Sbjct: 435 MKENKCVPDGITFATMIRALKAQGMTEDAQRL 466
>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 738
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 123/270 (45%), Gaps = 13/270 (4%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQT-GNYKKLDSLMHEM 213
Y L+N Y +A+ + ++M +RG + YN + +++ +++ +D L++ M
Sbjct: 438 YTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMD-LLNYM 496
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E +G++ + T I++ +A E ++ ++ + V + +Y +GY +A L
Sbjct: 497 ESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGE-SVEISVEIYTALVNGYCEAAL 555
Query: 274 SDK------ALAVLRKSEVLMMHNKFSRA-YDFVITQYAACGNKDDVLRVWKRY-KQNLK 325
+K A +LR +L M+ K S+ Y + T GN + ++ +
Sbjct: 556 IEKSHELKEAFILLRT--MLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFT 613
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
Y +I+ K + + A ++F++ + R + D +I+ YC+ L +A L
Sbjct: 614 PDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHEL 673
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+ RG +P+V + ++ G L + +E
Sbjct: 674 FKDMKERGIKPDVIAYTVIIKGLLNSGHTE 703
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/302 (19%), Positives = 127/302 (42%), Gaps = 46/302 (15%)
Query: 151 LPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
LP++ + L+N + A + + + GL+ Y ++ + G+++ +
Sbjct: 187 LPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVR 246
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGE--------------------------GID 242
+ EM+E G+D D Y ++ + + + G
Sbjct: 247 VFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFC 306
Query: 243 KIVAMMEAD--------RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
+ EA+ +G+V D VY GY + DKALAV + M ++
Sbjct: 307 NETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKS-----MISRGI 361
Query: 295 RAYDFVITQYAAC----GNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEK 349
+ + + C G +V+ +++ +K++ L + + Y + +L K ++ A
Sbjct: 362 KTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVG 421
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
+ +E +S L D++ LI+ Y +G +A++L + + RG +P+V + ++A G+
Sbjct: 422 MLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFF 481
Query: 410 QN 411
+N
Sbjct: 482 RN 483
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 120/261 (45%), Gaps = 19/261 (7%)
Query: 135 IEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+++A S F + ++ +P VY+ AL++ Y +++ +KA + + M RG+ + ++
Sbjct: 311 LDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSC 370
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+++ + G ++ + E +E G+ D+ ++IL A +D V M++ +
Sbjct: 371 ILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGK---VDDAVGMLDELK 427
Query: 253 GVVLDWTV--YATAASGYVKAGLSDKALAVLRKSEV------LMMHNKFSRAYDFVITQY 304
+ LD + Y T +GY G +A ++ ++ E ++ +N + + T +
Sbjct: 428 SMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDF 487
Query: 305 AACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
A D+L + Q ++ + + +I L +E AE+ F + ++ +
Sbjct: 488 EAM----DLLNYME--SQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVE 541
Query: 365 IPNHLIDAYCRRGLLHKAETL 385
I L++ YC L+ K+ L
Sbjct: 542 IYTALVNGYCEAALIEKSHEL 562
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 120/293 (40%), Gaps = 18/293 (6%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y A++ + ++AE + +M +GLV Y ++++ Y + N+ K ++ M
Sbjct: 298 YTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMI 357
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAG 272
+GI + FS +L G ++ +V M E + G+ +D Y K G
Sbjct: 358 SRGIKTNCVIFSCILHCLDEM--GRALE-VVDMFEEFKESGLFIDRKAYNILFDALCKLG 414
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-----YKQNLKVY 327
D A+ +L + + + + + Y +I Y G + ++K +K ++ Y
Sbjct: 415 KVDDAVGMLDELKSMQLDVDM-KHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAY 473
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
N + F+ M+ + ES+ + + +I+ C G + +AE
Sbjct: 474 NVLAAGFFRNRTDFEAMD----LLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFN 529
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA--GTRWKPSK 438
+ E +V + + GY + EK E +K+A +LL KPSK
Sbjct: 530 WLKGESVEISVEIYTALVNGYCEAALIEKSHE-LKEAFILLRTMLEMNMKPSK 581
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 5/156 (3%)
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
LI K +++A + E PS +Y + A C + E A + G
Sbjct: 555 LIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTP 614
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKI 244
+ Y M+N Y +T + L +M+E+GI D T++I+++ C E +
Sbjct: 615 DAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELF 674
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV 280
M E RG+ D Y G + +G ++ A +
Sbjct: 675 KDMKE--RGIKPDVIAYTVIIKGLLNSGHTEIAFQL 708
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 160/369 (43%), Gaps = 17/369 (4%)
Query: 42 ISLRKGSSMYKLYRMLSPMGD--PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRF 99
I++ KG Y++ ++ + P S+ +D + + L M+ +I ++F +
Sbjct: 6 ITVEKGKYGYEIESCINSLSQLPPRGSVTRCMDLYRSK---LTMQDFSLIFREFAARSDW 62
Query: 100 SHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVY--IA 157
AL++ +M ++ T I + ++ + +E+ + F +PE +VY A
Sbjct: 63 HRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTA 122
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEEK 216
L+NAY E + ++ +M+ + I YN+++N + G +++ L +L +M +
Sbjct: 123 LINAYGRNGQYEASLHLLARMKKERVEPNLITYNTVLNACSKGGLDWEGLLNLFAQMRHE 182
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
GI D T++ LLSAC++ E + M + GVV D Y + + + +
Sbjct: 183 GIQPDLITYNTLLSACSSRGLVEQAAMVFKTMN-ESGVVADAVTYKSLVDTFAGSNQLGR 241
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVIS 336
+LR+ E + Y+ +I YA GN V+K+ ++ + + S
Sbjct: 242 VEELLREMEDEGNSPDIA-GYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPD---VETYS 297
Query: 337 SLLKFDG----MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+LL+ G E +F + + + + N LI + G ++ L +
Sbjct: 298 TLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDS 357
Query: 393 GTEPNVRTW 401
G +P+ T+
Sbjct: 358 GVKPDDATY 366
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 105/273 (38%), Gaps = 26/273 (9%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
C P+ Y LL Y E+ + M++ YNS++ V+ + G
Sbjct: 288 GCAPDV----ETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGY 343
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
+++ +L H+M + G+ D T+S LLS C KI M + ++ A
Sbjct: 344 FQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTP---SLEA 400
Query: 263 TAA--SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
+A S Y K + AL + + + S AYD +I YA G ++
Sbjct: 401 SAGLISSYGKMAMYKDALVSYYRIREAGLDPQVS-AYDALIQGYAKGG-------LYVEA 452
Query: 321 KQNLKVYNR-GYICVISSL-------LKFDGMESAEKIFEEWESRNLCH-DIRIPNHLID 371
L N+ G+ +SS+ K + A + F E + + D R L+
Sbjct: 453 GSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQKEGSEVDERTHETLLG 512
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
YC GLL +A+ + P R + L+
Sbjct: 513 VYCDMGLLEEAKEEFVIIKETSKVPGARVYCLL 545
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 113/275 (41%), Gaps = 6/275 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y LL+A + E+A ++ + M + G+V + Y S+++ + + +++ L+ EM
Sbjct: 190 TYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREM 249
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E++G D ++ L+ A A A + G + M+ G D Y+T Y G
Sbjct: 250 EDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRG-GCAPDVETYSTLLRIYGNQGC 308
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK-RYKQNLKVYNRGYI 332
++ ++ + L + Y+ +I + G + + ++ +K + Y
Sbjct: 309 FEQVRSLFSDMKELSTPPTVA-TYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYS 367
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
++S + A KI + + + LI +Y + + A Y+ +
Sbjct: 368 ALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREA 427
Query: 393 GTEPNVRTWYLMATGYLQNN---QSEKGVEAMKKA 424
G +P V + + GY + ++ + AM KA
Sbjct: 428 GLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKA 462
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 151/359 (42%), Gaps = 46/359 (12%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKL--- 206
P+V+ ++NA KA +M+ M+ G + YN++++ Y + G K+
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKA 280
Query: 207 DSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAAS 266
D+++ EM E + + TF+IL+ + G K+ M D+ V + Y + +
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM-LDQDVKPNVISYNSLIN 339
Query: 267 GYVKAGLSDKALAVLRK--------------------------SEVLMMHNKF------- 293
G G +A+++ K E L M
Sbjct: 340 GLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP 399
Query: 294 -SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIF 351
+R Y+ +I Y G DD + + ++ V + G Y C+I+ L + +E+A+K+F
Sbjct: 400 TTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF 459
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
++ S+ L D+ + L++ YCR+G KA L+ + G +P T+ ++ GY +
Sbjct: 460 DQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK- 517
Query: 412 NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEII 470
E ++A +E R + + L Y ++ +E A+ + + K ++
Sbjct: 518 ---EGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 160/369 (43%), Gaps = 17/369 (4%)
Query: 42 ISLRKGSSMYKLYRMLSPMGD--PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRF 99
I++ KG Y++ ++ + P S+ +D + + L M+ +I ++F +
Sbjct: 6 ITVEKGKYGYEIESCINSLSQLPPRGSVTRCMDLYRSK---LTMQDFSLIFREFAARSDW 62
Query: 100 SHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVY--IA 157
AL++ +M ++ T I + ++ + +E+ + F +PE +VY A
Sbjct: 63 HRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTA 122
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEEK 216
L+NAY E + ++ +M+ + I YN+++N + G +++ L +L +M +
Sbjct: 123 LINAYGRNGQYEASLHLLARMKKEQVEPNLITYNTVLNACSKGGLDWEGLLNLFAQMRHE 182
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
GI D T++ LLSAC++ E + M + GVV D Y + + + +
Sbjct: 183 GIQPDLITYNTLLSACSSRGLVEQAAMVFKTMN-ESGVVADAVTYKSLVDTFAGSNQLGR 241
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVIS 336
+LR+ E + Y+ +I YA GN V+K+ ++ + + S
Sbjct: 242 VEELLREMEDEGNPPDIA-GYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPD---VETYS 297
Query: 337 SLLKFDG----MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+LL+ G E +F + + + + N LI + G ++ L +
Sbjct: 298 TLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDS 357
Query: 393 GTEPNVRTW 401
G +P+ T+
Sbjct: 358 GVKPDDATY 366
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 116/302 (38%), Gaps = 27/302 (8%)
Query: 119 PADVAIRLDLI---AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEI 173
P D+A LI A + AA F + P V Y LL Y E+
Sbjct: 255 PPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRS 314
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ M+D YNS++ V+ + G +++ +L H+M + G+ D T+S LLS C
Sbjct: 315 LFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCG 374
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAA--SGYVKAGLSDKALAVLRKSEVLMMHN 291
KI M + ++ A+A S Y K + AL + +
Sbjct: 375 RGGLTREAAKIHQHMLTNESTP---SLEASAGLISSYGKMAMYKDALVSYYRIREAGLDP 431
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSL-------LKFDG 343
+ S AYD +I YA G ++ L N+ G+ +SS+ K
Sbjct: 432 QVS-AYDALIQGYAKGG-------LYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGL 483
Query: 344 MESAEKIFEEWESRNLCH-DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
+ A + F E + + D R L+ YC GLL +A+ + P R +
Sbjct: 484 HDEALEFFSELQQKEGSEVDERTHETLLGVYCDMGLLEEAKEEFVIIKETSKVPGARVYC 543
Query: 403 LM 404
L+
Sbjct: 544 LL 545
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 113/275 (41%), Gaps = 6/275 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y LL+A + E+A ++ + M + G+V + Y S+++ + + +++ L+ EM
Sbjct: 190 TYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREM 249
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E++G D ++ L+ A A A + G + M+ G D Y+T Y G
Sbjct: 250 EDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRG-GCAPDVETYSTLLRIYGNQGC 308
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK-RYKQNLKVYNRGYI 332
++ ++ + L + Y+ +I + G + + ++ +K + Y
Sbjct: 309 FEQVRSLFSDMKDLSTPPTVA-TYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYS 367
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
++S + A KI + + + LI +Y + + A Y+ +
Sbjct: 368 ALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREA 427
Query: 393 GTEPNVRTWYLMATGYLQNN---QSEKGVEAMKKA 424
G +P V + + GY + ++ + AM KA
Sbjct: 428 GLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKA 462
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 142/348 (40%), Gaps = 25/348 (7%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
++M LL + E G D I++K KR AL++ + M P +V
Sbjct: 147 EAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALEL-LHMMADDQVWSCPPNVVS 205
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLK--LPS---VYIALLNAYACAKSAEKAEIIMQQMR 179
+I Q +N E + +P Y +++ A+ ++AE + QQM
Sbjct: 206 YSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMI 265
Query: 180 DRGLVKKTID-YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS-ACAAASD 237
D G VK ID YN +++ Y G +K++ ++ EM G + T+ LL+ C
Sbjct: 266 DNG-VKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRC 324
Query: 238 GEG---IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
E D ++ +G+ T Y GY G AL+ + LM+ N S
Sbjct: 325 REARFFFDSMIG-----KGIKPSVTTYGIMLHGYATKG----ALSEMHDLLNLMVANGIS 375
Query: 295 ---RAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKI 350
++ + YA CG D + ++ + + Q L Y +I +L K ++ AE
Sbjct: 376 PNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVK 435
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
F + + + DI + + L+ C K E L ++ G PN+
Sbjct: 436 FNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNI 483
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 56/141 (39%), Gaps = 9/141 (6%)
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y VI+ ++ +F E R + D+ +ID C+ L +AE + +
Sbjct: 206 YSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMI 265
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECL--AACLGYY 448
G +PN+ T+ + GYL + K+ + +LE + P C + L Y
Sbjct: 266 DNGVKPNIDTYNCLIHGYLS-------IGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYL 318
Query: 449 KKERDIEGADYFIKLLTGKEI 469
K A +F + GK I
Sbjct: 319 CKNGRCREARFFFDSMIGKGI 339
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y LL+ Y A + A ++M G+ + YN++++ +QT + + L M
Sbjct: 556 YNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMI 615
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAG 272
G D YT++I+L+ ++ +D+ + M + +G+ L+ + +K G
Sbjct: 616 NSGTKWDIYTYNIILNGLCKSN---CVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGG 672
Query: 273 LSDKAL 278
+ A+
Sbjct: 673 RKEDAM 678
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 127/303 (41%), Gaps = 21/303 (6%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+E+A S N + E P V Y ++++ A + QM + G+ + Y S
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
++N +G ++ DSL+ M ++ I D TF+ L+ A +G+ +D E R
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID--AFVKEGKFLDAEELYNEMIR 275
Query: 253 -GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYDFVITQYAAC 307
+ + Y + +G+ G D+A + +M K AY +I + C
Sbjct: 276 MSIAPNIFTYTSLINGFCMEGCVDEA-----RQMFYLMETKGCFPDVVAYTSLINGFCKC 330
Query: 308 GNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
DD ++++ Q N Y +I + A+++F SR + +IR
Sbjct: 331 KKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTY 390
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLR---GTEPNVRTWYLMATGYLQNNQSEKGV---EA 420
N L+ C G + KA + Q R G PN+ T+ ++ G N + EK + E
Sbjct: 391 NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Query: 421 MKK 423
M+K
Sbjct: 451 MRK 453
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 132/320 (41%), Gaps = 22/320 (6%)
Query: 99 FSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YI 156
FS L +S W+ N+ I + + +Q +A F + E LPS+ +
Sbjct: 24 FSRLLDLSFWVRAFCNYR------EILRNGLHSLQ-FNEALDLFTHMVESRPLPSIIDFT 76
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
LLN A K + + ++ G+ N +MN + Q+ S + +M +
Sbjct: 77 KLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKL 136
Query: 217 GIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
G + D TF+ L++ C E + + M+E G+ D +Y T K G +
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM--GIKPDVVMYTTIIDSLCKNGHVN 194
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACG---NKDDVLR--VWKRYKQNLKVYNRG 330
AL++ + E + Y ++ G + D +LR ++ K ++ +N
Sbjct: 195 YALSLFDQMENYGIRPDVV-MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN-- 251
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
+I + +K AE+++ E ++ +I LI+ +C G + +A + Y +
Sbjct: 252 --ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 391 LRGTEPNVRTWYLMATGYLQ 410
+G P+V + + G+ +
Sbjct: 310 TKGCFPDVVAYTSLINGFCK 329
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 27/224 (12%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
L+D +V+EG+ LD E+L + R S A I + + + F +
Sbjct: 253 LIDAFVKEGKFLDAEEL------YNEMIRMSIAPNIFTYTSLINGFCMEGC--------- 297
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
+++A F + K P V Y +L+N + K + A I +M +GL T
Sbjct: 298 -----VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
I Y +++ + Q G + M +G+ + T+++LL + I
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 248 MEADR--GVVLDWTVYATAASGYVKAGLSDKALAV---LRKSEV 286
M+ GV + Y G G +KAL V +RK E+
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREM 456
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 98/246 (39%), Gaps = 10/246 (4%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLM---H 211
Y +L+N + ++A + M +G + Y S++N + + KK+D M +
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKC---KKVDDAMKIFY 341
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
EM +KG+ + T++ L+ ++ + M RGV + Y
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM-VSRGVPPNIRTYNVLLHCLCYN 400
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC--GNKDDVLRVWKRY-KQNLKVYN 328
G KAL + + M + + + + C G + L V++ K+ + +
Sbjct: 401 GKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGI 460
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y +I + K +++A +F S+ + ++ +I R GL H+A L K
Sbjct: 461 ITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRK 520
Query: 389 AQLRGT 394
+ G
Sbjct: 521 MKEDGV 526
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 132/307 (42%), Gaps = 20/307 (6%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFS-IL 228
+A ++ QM RG + I Y++++N Y Q G +++ L+ EM+ KG+ + YT++ ++
Sbjct: 271 EAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVI 330
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM 288
L C E ++++ M ++ G+ D +Y T G+ K G A + + M
Sbjct: 331 LLLCKTGKVAEA-ERVLREMISE-GIAPDGVIYTTLIDGFCKLGNVSSAYRLFDE----M 384
Query: 289 MHNKFSRAYDFVITQYAACG--NKDDVLRVWKRYKQ----NLKVYNRGYICVISSLLKFD 342
K S DF+ CG V+ K + + L+ Y +I K
Sbjct: 385 QKRKISP--DFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEG 442
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
M+ A + + L +I L D C+ G + A L+++ +G E N+ T+
Sbjct: 443 KMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYN 502
Query: 403 LMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIK 462
+ G + ++ V+ MK V AG + P + Y K R++ A ++
Sbjct: 503 SLVNGLCKAGNIDQAVKLMKDMEV---AG--FHPDAVTYTTLMDAYCKSREMVRAHELLR 557
Query: 463 LLTGKEI 469
+ +E+
Sbjct: 558 QMLDREL 564
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 110/269 (40%), Gaps = 24/269 (8%)
Query: 165 AKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYT 224
K AE AE ++++M G+ + Y ++++ + + GN L EM+++ I D T
Sbjct: 337 GKVAE-AERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFIT 395
Query: 225 FSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS 284
++ ++ DK+ M R + D Y GY K G +
Sbjct: 396 YTAVICGLCQTGRVMEADKLFHEMVCKR-LEPDEVTYTALIDGYCKEG---------KMK 445
Query: 285 EVLMMHNKFSR--------AYDFVITQYAACGNKD---DVLRVWKRYKQNLKVYNRGYIC 333
E +HN+ + Y + CG D ++L R L +Y Y
Sbjct: 446 EAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYT--YNS 503
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+++ L K ++ A K+ ++ E D L+DAYC+ + +A L+ + R
Sbjct: 504 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 563
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+P V T+ ++ G+ + E G + +K
Sbjct: 564 LQPTVVTFNVLMNGFCMSGMLEDGEKLLK 592
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 14/266 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y L++ + + A + +M+ R + I Y +++ QTG + D L HEM
Sbjct: 360 IYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM 419
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
K ++ D+ T++ L+ C E M++ G+ + Y A G K G
Sbjct: 420 VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQM--GLTPNIVTYTALADGLCKCG 477
Query: 273 LSDKALAVL----RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVY 327
D A +L RK L ++ Y+ ++ GN D +++ K +
Sbjct: 478 EVDTANELLHEMCRKGLELNIY-----TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPD 532
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y ++ + K M A ++ + R L + N L++ +C G+L E L+
Sbjct: 533 AVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLK 592
Query: 388 KAQLRGTEPNVRTWYLMATGY-LQNN 412
+G PN T+ + Y ++NN
Sbjct: 593 WMLEKGIMPNATTYNSLIKQYCIRNN 618
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 126/310 (40%), Gaps = 48/310 (15%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y AL++ Y ++A + QM GL + Y ++ + + G + L+HEM
Sbjct: 431 YTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMC 490
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
KG++ + YT++ L++ A + + K++ ME G D Y T Y K+
Sbjct: 491 RKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEV-AGFHPDAVTYTTLMDAYCKSREM 549
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
+A +LR+ M+ + V+T V G+
Sbjct: 550 VRAHELLRQ----MLDRELQPT---VVT---------------------FNVLMNGF--C 579
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL-RG 393
+S +L E EK+ + + + + N LI YC R + +A T IY+ +G
Sbjct: 580 MSGML-----EDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM-RATTEIYRGMCAKG 633
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE--AGTRWKPSKECLAACL-GYYKK 450
P+ T+ ++ G+ + MK+A L G + + A + G+YK+
Sbjct: 634 VVPDGNTYNILIKGHCK-------ARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKR 686
Query: 451 ERDIEGADYF 460
++ +E + F
Sbjct: 687 KKFLEARELF 696
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 106/253 (41%), Gaps = 7/253 (2%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ + + G+ T YN + + Q G + L+ +ME +G D ++S +++
Sbjct: 240 VFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYC 299
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK--SEVLMMHN 291
+ + + K++ M+ +G+ + Y K G +A VLR+ SE +
Sbjct: 300 QVGELQRVLKLIEEMQI-KGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDG 358
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKI 350
Y +I + GN R++ K+ + Y VI L + + A+K+
Sbjct: 359 VI---YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKL 415
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
F E + L D LID YC+ G + +A +L + G PN+ T+ +A G +
Sbjct: 416 FHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 475
Query: 411 NNQSEKGVEAMKK 423
+ + E + +
Sbjct: 476 CGEVDTANELLHE 488
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
DG++ A K+F E+ +C + N + + C+ G + +A L+ + +LRG P+V +
Sbjct: 231 LDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVIS 290
Query: 401 WYLMATGYLQNNQSEKGVEAMKKALVLLE 429
+ + GY Q V +++ L L+E
Sbjct: 291 YSTVINGYCQ-------VGELQRVLKLIE 312
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 133/307 (43%), Gaps = 47/307 (15%)
Query: 137 QAASYFNCVPEKLKLPSV--YIALLNAYACAKSA---EKAEIIMQQMRDRGLVKKTIDYN 191
+A F+ + +P++ Y A+++A C K +K I M G+ I +N
Sbjct: 243 EAIKVFDSMKSNGLMPNLVTYNAVIDA--CGKGGVEFKKVVEIFDGMLSNGVQPDRITFN 300
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
S++ V + G ++ L M +KGID D +T++ LL A + +I++ M
Sbjct: 301 SLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPT- 359
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVITQYAACGNK 310
+ ++ + Y+T GY K G D AL + + + L + R +Y+ +++ YA G
Sbjct: 360 KNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGV--GLDRVSYNTLLSVYAKLGRF 417
Query: 311 DDVLRVWK-------------------------RYKQNLKVYN---RG--------YICV 334
+ L V K RY + +V+ RG Y +
Sbjct: 418 EQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTL 477
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I K + A ++F E++ L D+ + + LIDA C+ GL+ + TL+ + G
Sbjct: 478 IDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGI 537
Query: 395 EPNVRTW 401
PNV T+
Sbjct: 538 RPNVVTY 544
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 133/303 (43%), Gaps = 8/303 (2%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGL 183
+ + ++ +E A + F+ ++ +VY AL++AY + +A + M+ GL
Sbjct: 197 ISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGL 256
Query: 184 VKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ + YN++++ + G +KK+ + M G+ D+ TF+ LL+ C+ E
Sbjct: 257 MPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAAR 316
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL-MMHNKFSRAYDFVI 301
++ + M D+G+ D Y T K G D A ++ + ++ N + Y +I
Sbjct: 317 RLFSAM-VDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVT--YSTMI 373
Query: 302 TQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
YA G DD L ++ K + + Y ++S K E A + +E E+ +
Sbjct: 374 DGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIR 433
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
D+ N L+ Y ++ + + + + PN+ T+ + Y + ++ +E
Sbjct: 434 KDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEV 493
Query: 421 MKK 423
++
Sbjct: 494 FRE 496
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 146/359 (40%), Gaps = 30/359 (8%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D + L DQ + G ++ I+ RF+ L++ M++ TP V
Sbjct: 366 DEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSG---CTPNRVT- 421
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSV------YIALLNAYACAKSAEKAEIIMQQM 178
+ + V G Y V E +K V Y L+ AY S A + +M
Sbjct: 422 -WNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEM 480
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG 238
G YN+++NV + G++ S++ +M KG + ++S+LL A +
Sbjct: 481 TSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNI 540
Query: 239 EGIDKIVAMMEADRGVVL-DWTVYATAASGYVKA---GLSDKALAVLRKSEVLMMHNKFS 294
GID I E G V W + T K G +KA ++ +N
Sbjct: 541 AGIDAIEK--EVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARG----YNPDL 594
Query: 295 RAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNRGYICVISSLLKFDGMESAEK 349
++ +++ YA G V ++ KQ +L YN ++ K AEK
Sbjct: 595 VIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNS----LMDMYAKCSESWEAEK 650
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
I + +S + D+ N +I+ +C++GL+ +A+ ++ + G P V T++ + GY
Sbjct: 651 ILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGY 709
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 134/313 (42%), Gaps = 47/313 (15%)
Query: 152 PSVYIALLNAYACAKSA--EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P + A AC + ++A + ++ RG + YN+++ V+ + GNY + +
Sbjct: 242 PDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRV 301
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+ EME+ G D T++ L A A E K + M + +G++ + Y T + Y
Sbjct: 302 LKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTS-KGLLPNAFTYNTVMTAYG 360
Query: 270 KAGLSDKALAV---LRKSEVLMMHNKFSRAYDFVI------------------------- 301
G D+ALA+ ++KS + N Y+F++
Sbjct: 361 NIGKVDEALALFDQMKKSGCVPNVN----TYNFILGMLGKKSRFTVMLEMLGEMSRSGCT 416
Query: 302 -------TQYAACGNK---DDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKI 350
T A CG + D V RV + K +++ Y +I++ + +A K+
Sbjct: 417 PNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKM 476
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
+ E S + N L++ R+G A++++ K + +G +PN +++ L+ Y +
Sbjct: 477 YNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAK 536
Query: 411 NNQSEKGVEAMKK 423
G++A++K
Sbjct: 537 GGNI-AGIDAIEK 548
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 138/352 (39%), Gaps = 63/352 (17%)
Query: 63 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
P ++ L +E P D+ L +K L + AL + W + A
Sbjct: 86 PLPTLPAFLASRRDELLPADIPSL---LKALELSGHWEWALALLRWAGAEG------AAD 136
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPS-------VYIALLNAYACAKSAEKAEIIM 175
A L+++ + G E + +++ LP Y +L+A + A E+A +
Sbjct: 137 ASALEMVVRALGREGQHDAVCALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERAVELF 196
Query: 176 QQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAA 234
++R +G+ + YN +++VY + G ++ ++ +L+ EM G++ D +T S +++AC
Sbjct: 197 AELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAAC-- 254
Query: 235 ASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
+ GL D+A+A + H
Sbjct: 255 ----------------------------------CRDGLVDEAVAFFEDLKA-RGHTPCV 279
Query: 295 RAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNRGYICVISSLLKFDGMESAEK 349
Y+ ++ + GN + LRV K +Q + YN + + + E A K
Sbjct: 280 VTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNE----LAGTYARAGFYEEAAK 335
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+ S+ L + N ++ AY G + +A L + + G PNV T+
Sbjct: 336 CLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTY 387
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 123/275 (44%), Gaps = 5/275 (1%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K Q +++A + + +P Y ++++ + + ++A + +++MR G+
Sbjct: 126 LCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPD 185
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ YNS+M+ + G + + M ++G+ D T+ LL A + ++
Sbjct: 186 VVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLD 245
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
+M G+ + V++ Y K ++A+ V K + N + Y VI
Sbjct: 246 LM-VRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGL-NPNAVTYGTVIDVLCK 303
Query: 307 CGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
G +D + +++ + L+ + Y +I SL FD E AE++F E R +C
Sbjct: 304 SGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIF 363
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
N +ID++C+ G + ++ L G +P++ T
Sbjct: 364 FNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 106/265 (40%), Gaps = 27/265 (10%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC--DKYTFS 226
E A + ++ RG + YN ++N ++ L+H M + G DC D ++S
Sbjct: 34 EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 227 ILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR---K 283
+++ D +DK++ D+ + + Y + + KA DKA+ VL K
Sbjct: 93 TVINGFFKEGD---LDKML-----DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 144
Query: 284 SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNRGYICVISSL 338
S V+ Y+ ++ + + G + + K+ + ++ YN ++ L
Sbjct: 145 SGVM----PDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNS----LMDYL 196
Query: 339 LKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
K A KIF+ R L DI L+ Y +G L + L+ G PN
Sbjct: 197 CKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 256
Query: 399 RTWYLMATGYLQNNQSEKGVEAMKK 423
+ ++ Y + + E+ + K
Sbjct: 257 YVFSILVCAYAKQEKVEEAMLVFSK 281
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 7/267 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y +++ K + A + ++M +G+ + Y+S+++ G + L+ +M
Sbjct: 258 IYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E+ I+ D +TFS L+ A +K+ M R + Y++ +G+
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM-VKRSIDPSIVTYSSLINGFCMHDR 376
Query: 274 SDKALAVLRKSEVLMMHNKFSR--AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-G 330
D+A + E ++ + F +Y +I + D+ + +++ Q V N
Sbjct: 377 LDEAKQMF---EFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I L + + A++IF+E S + +I N L+D C+ G L KA + Q
Sbjct: 434 YTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKG 417
EP + T+ +M G + + E G
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 84/407 (20%), Positives = 168/407 (41%), Gaps = 29/407 (7%)
Query: 68 VPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV--AIR 125
V L+D+ V +G D+ +++ L KR L + + K L P +
Sbjct: 206 VALIDRMVAKGCQPDLVTYGVVVNG--LCKRGDTDLAF-ILLNKMEQGKLEPGVLIYTTI 262
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K + ++ A + F + K P+V Y +L++ A ++ M +R +
Sbjct: 263 IDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
++++++ + + G + + L EM ++ ID T+S L++ + +D+
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH---DRLDE 379
Query: 244 IVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFV 300
M E + D Y+T G+ KA D+ + + R+ S+ ++ N + Y +
Sbjct: 380 AKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT--YTTL 437
Query: 301 ITQYAACGNKDDVLRVWKR-----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
I G+ D ++K N+ YN ++ L K +E A +FE +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT----LLDGLCKNGKLEKAMVVFEYLQ 493
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+ I N +I+ C+ G + L L+G +P+V + M +G+ + E
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553
Query: 416 KGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIK 462
+ K+ + E GT P+ C + ++ D E + IK
Sbjct: 554 EADALFKE---MKEDGTL--PNSGCYNTLIRARLRDGDREASAELIK 595
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 117/281 (41%), Gaps = 17/281 (6%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P V+ AL++A+ +AE + +M R + + Y+S++N + + +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 210 MHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
M K D ++S L+ C A EG++ M + RG+V + Y T G
Sbjct: 384 FEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREM--SQRGLVGNTVTYTTLIQGL 441
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVW---KRYKQ 322
+AG D A + ++ M+ + Y+ ++ G + + V+ +R K
Sbjct: 442 FQAGDCDMAQEIFKE----MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 323 NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
+Y Y +I + K +E +F + + D+ N +I +CR+G +A
Sbjct: 498 EPTIYT--YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 383 ETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ L + + GT PN + + L++ E E +K+
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 109/271 (40%), Gaps = 41/271 (15%)
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVA 246
I+++ +++ + + + SL +M+ G+ + YT+SIL++ C + + +
Sbjct: 82 IEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGK 141
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV----------------LMMH 290
MM+ G + ++ +GY + +A+A++ + V L +H
Sbjct: 142 MMKL--GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 199
Query: 291 NKFSRA------------------YDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGY 331
NK S A Y V+ G+ D + + +Q L+ Y
Sbjct: 200 NKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIY 259
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I L K M+ A +F+E E++ + ++ + LI C G A L+
Sbjct: 260 TTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
R P+V T+ + +++ K VEA K
Sbjct: 320 RKINPDVFTFSALIDAFVKEG---KLVEAEK 347
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 137/297 (46%), Gaps = 28/297 (9%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P V + AL++ + +AE + ++M RG+ T+ Y S+++ + + K + +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 210 MHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ M KG + TF+IL++ C A +G++ M + RGVV D Y T G+
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM--SLRGVVADTVTYNTLIQGF 432
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSR----AYDFVITQYAACGNKDDVLRVWKRYKQNL 324
+ G + A + ++ M ++ R +Y ++ G + L ++++ +++
Sbjct: 433 CELGKLEVAKELFQE-----MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWES------RNLCHDIRIPNHLIDAYCRRGL 378
+ G +I GM +A K+ + W+ + + D++ N +I C++G
Sbjct: 488 MELDIGIYNII-----IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN---NQSEKGVEAMKKALVLLEAGT 432
L +A+ L K + G PN T+ ++ +L +S K +E +K+ ++A T
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAST 599
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 13/260 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y L+ + A + +++ M R + + ++++++ + + G ++ + L EM
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
++GI D T++ L+ + + + ++ +M +G + + +GY KA L
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM-VSKGCGPNIRTFNILINGYCKANL 402
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
D L + RK + + + Y+ +I + G L V K Q + V R
Sbjct: 403 IDDGLELFRKMSLRGVVAD-TVTYNTLIQGFCELGK----LEVAKELFQEM-VSRRVRPD 456
Query: 334 VISSLLKFDGM------ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
++S + DG+ E A +IFE+ E + DI I N +I C + A L
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 516
Query: 388 KAQLRGTEPNVRTWYLMATG 407
L+G +P+V+T+ +M G
Sbjct: 517 SLPLKGVKPDVKTYNIMIGG 536
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 105/267 (39%), Gaps = 36/267 (13%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
AL+N A +++ +M + G + Y ++ V ++G L+ +MEE+
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
I D +SI++ + + ME +G D +Y T G+ AG D
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI-KGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVIS 336
+LR M+ K + DV+ + +I
Sbjct: 301 GAKLLRD----MIKRKIT----------------PDVV---------------AFSALID 325
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
+K + AE++ +E R + D LID +C+ L KA ++ +G P
Sbjct: 326 CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385
Query: 397 NVRTWYLMATGYLQNNQSEKGVEAMKK 423
N+RT+ ++ GY + N + G+E +K
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRK 412
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 106/254 (41%), Gaps = 11/254 (4%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ Q+M + ID++ + +V +T Y + L +ME KGI + YT SI+++ C
Sbjct: 59 LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC 118
Query: 234 AASD----GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
+ KI+ + G D ++T +G G +AL ++ + V M
Sbjct: 119 RCRKLSLAFSAMGKIIKL-----GYEPDTVTFSTLINGLCLEGRVSEALELVDRM-VEMG 172
Query: 290 HNKFSRAYDFVITQYAACGN-KDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAE 348
H + ++ G D VL + + + + Y V+ + K A
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
++ + E R + D + +ID C+ G L A L + +++G + ++ + + G+
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 409 LQNNQSEKGVEAMK 422
+ + G + ++
Sbjct: 293 CYAGRWDDGAKLLR 306
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 135/292 (46%), Gaps = 26/292 (8%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ AL++ + +AE + ++M RG+ T+ Y S+++ + + K + ++ M
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 215 EKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
KG + TF+IL++ C A +G++ M + RGVV D Y T G+ + G
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKM--SLRGVVADTVTYNTLIQGFCELGK 437
Query: 274 SDKALAVLRKSEVLMMHNKFSR----AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
+ A + ++ M ++ R +Y ++ G + L ++++ +++ +
Sbjct: 438 LEVAKELFQE-----MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492
Query: 330 GYICVISSLLKFDGMESAEKIFEEWES------RNLCHDIRIPNHLIDAYCRRGLLHKAE 383
G +I GM +A K+ + W+ + + D++ N +I C++G L +A+
Sbjct: 493 GIYNII-----IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQN---NQSEKGVEAMKKALVLLEAGT 432
L K + G PN T+ ++ +L +S K +E +K+ ++A T
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAST 599
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 13/260 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y L+ + A + +++ M R + + ++++++ + + G ++ + L EM
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
++GI D T++ L+ + + + ++ +M +G + + +GY KA L
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM-VSKGCGPNIRTFNILINGYCKANL 402
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
D L + RK + + + Y+ +I + G L V K Q + V R
Sbjct: 403 IDDGLELFRKMSLRGVVAD-TVTYNTLIQGFCELGK----LEVAKELFQEM-VSRRVRPD 456
Query: 334 VISSLLKFDGM------ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
++S + DG+ E A +IFE+ E + DI I N +I C + A L
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 516
Query: 388 KAQLRGTEPNVRTWYLMATG 407
L+G +P+V+T+ +M G
Sbjct: 517 SLPLKGVKPDVKTYNIMIGG 536
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 105/267 (39%), Gaps = 36/267 (13%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
AL+N A +++ +M + G + Y ++ V ++G L+ +MEE+
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
I D +SI++ + + ME +G D +Y T G+ AG D
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI-KGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVIS 336
+LR M+ K + DV+ + +I
Sbjct: 301 GAKLLRD----MIKRKIT----------------PDVV---------------AFSALID 325
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
+K + AE++ +E R + D LID +C+ L KA ++ +G P
Sbjct: 326 CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385
Query: 397 NVRTWYLMATGYLQNNQSEKGVEAMKK 423
N+RT+ ++ GY + N + G+E +K
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRK 412
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 106/254 (41%), Gaps = 11/254 (4%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ Q+M + ID++ + +V +T Y + L +ME KGI + YT SI+++ C
Sbjct: 59 LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC 118
Query: 234 AASD----GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
+ KI+ + G D ++T +G G +AL ++ + V M
Sbjct: 119 RCRKLSLAFSAMGKIIKL-----GYEPDTVTFSTLINGLCLEGRVSEALELVDRM-VEMG 172
Query: 290 HNKFSRAYDFVITQYAACGN-KDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAE 348
H + ++ G D VL + + + + Y V+ + K A
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
++ + E R + D + +ID C+ G L A L + +++G + ++ + + G+
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 409 LQNNQSEKGVEAMK 422
+ + G + ++
Sbjct: 293 CYAGRWDDGAKLLR 306
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 126/290 (43%), Gaps = 15/290 (5%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K + + A +F + K P+V Y AL+N + A +++ M R +
Sbjct: 197 IDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKI 256
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
I Y+++++ + + G + + EM ID D T+S L++ + ++
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVIT 302
+ +M +G D Y T +G+ KA + + + RK S+ +++N + Y+ +I
Sbjct: 317 MFDLM-VSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVT--YNTLIQ 373
Query: 303 QYAACGNKDDVLRVWKRYKQ-----NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
+ G+ D + + ++ YN ++ L +E A IFE+ +
Sbjct: 374 GFFQVGDVDKAQEFFSQMDSFGVSPDIWTYN----ILLGGLCDNGLLEKALVIFEDMQKS 429
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+ DI +I C+ G + A L L+G +P++ T+ M +G
Sbjct: 430 EMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSG 479
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/277 (18%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y A++++ + A +++ +G+ + Y +++N +G + L+ +M
Sbjct: 193 YNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMI 252
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR-GVVLDWTVYATAASGYVKAGL 273
++ I + T+S LL A +G+ ++ E R + D Y++ +G
Sbjct: 253 KRKITPNVITYSALLDA--FVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING------ 304
Query: 274 SDKALAVLRKSEVLMMHNKFSRA---YDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG 330
L +H++ A +D ++++ G DV+
Sbjct: 305 -------------LCLHDRIDEANQMFDLMVSK----GCFPDVV---------------S 332
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I+ K +E K+F + R L ++ N LI + + G + KA+ +
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMD 392
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGV---EAMKKA 424
G P++ T+ ++ G N EK + E M+K+
Sbjct: 393 SFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKS 429
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 111/272 (40%), Gaps = 38/272 (13%)
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVA 246
+D+N +++ + Y + SL +ME GI D YTF+I+++ C + +
Sbjct: 86 VDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGK 145
Query: 247 MMEADRGVVLDWTVYATAASGYVK-------AGLSDKALAVLRKSEV---------LMMH 290
M++ G D + +G+ + L DK + + + ++ L
Sbjct: 146 MLKL--GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKT 203
Query: 291 NKFSRAYDFV-----------ITQYAA-----C--GNKDDVLRVWK-RYKQNLKVYNRGY 331
+ + A DF + Y A C G +D R+ + K+ + Y
Sbjct: 204 RRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITY 263
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
++ + +K + A++IFEE ++ DI + LI+ C + +A +
Sbjct: 264 SALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 323
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+G P+V ++ + G+ + + E G++ +K
Sbjct: 324 KGCFPDVVSYNTLINGFCKAKRVEDGMKLFRK 355
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 117/256 (45%), Gaps = 3/256 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ +L++AYA A A +++M+ G+ + Y+ +++ Y +T + + D+L E
Sbjct: 288 VFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEA 347
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ K + + +S ++ A + + + +++V ME D G+ VY + GY
Sbjct: 348 KTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEED-GIDAPIDVYHSMMHGYTVVQD 406
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYI 332
K L V + + +Y +I Y G + + K + + +K N+ Y
Sbjct: 407 EKKCLIVFERLKECGFKPTII-SYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYS 465
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I+ + +A IFE+ L D I N L++A+C+ G + +A + + Q
Sbjct: 466 MLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKE 525
Query: 393 GTEPNVRTWYLMATGY 408
+P+ RT+ + G+
Sbjct: 526 RMQPSNRTFRPIIEGF 541
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 112/275 (40%), Gaps = 46/275 (16%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY ++++ Y + +K I+ +++++ G I Y ++N+Y + G K ++ EM
Sbjct: 393 VYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEM 452
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY---VK 270
E GI + T+S+L++ D +A A S + +K
Sbjct: 453 ESHGIKHNNKTYSMLINGFIHLHD-----------------------FANAFSIFEDMIK 489
Query: 271 AGL-SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYN 328
+GL D+A+ Y+ ++ + GN D +R+++R K+ ++ N
Sbjct: 490 SGLQPDRAI------------------YNLLVEAFCKMGNMDRAIRIFERMQKERMQPSN 531
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
R + +I M+ A + + N LI R+ + KA +++ K
Sbjct: 532 RTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDK 591
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ G PN T+ ++ GY + K E K
Sbjct: 592 MSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTK 626
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 104/249 (41%), Gaps = 3/249 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+N + A I + M GL YN ++ + + GN + + M
Sbjct: 463 TYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERM 522
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+++ + TF ++ A A D + + +M G Y G V+
Sbjct: 523 QKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRS-GCAPTVMTYNALIHGLVRKHQ 581
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYI 332
+KA++VL K + + Y ++ YAA G+ + + K++ LK+ Y
Sbjct: 582 VEKAVSVLDKMSIAGIAPN-EHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYE 640
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
++ + K M+SA + E + + + I N LID + RRG + +A L+ + +
Sbjct: 641 TLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKED 700
Query: 393 GTEPNVRTW 401
G PN+ T+
Sbjct: 701 GIPPNIHTF 709
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 5/147 (3%)
Query: 135 IEQAASYFNCVPEK-LKLPSVYIALLNAYACAKSA--EKAEIIMQQMRDRGLVKKTIDYN 191
I +A YF + E LKL VYI AC KS + A + ++M + + + T YN
Sbjct: 617 IGKAFEYFTKIKESGLKL-DVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYN 675
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
+++ + + G+ + L+ +M+E GI + +TF+ ++AC A D + + ++ M AD
Sbjct: 676 ILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEM-AD 734
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKAL 278
G+ + + T G+ + L D+AL
Sbjct: 735 VGLKPNVKTFTTLIKGWARVSLPDRAL 761
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 100/270 (37%), Gaps = 48/270 (17%)
Query: 144 CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
C P + Y AL++ EKA ++ +M G+ Y +M Y +G+
Sbjct: 562 CAPTVM----TYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDI 617
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYAT 263
K +++E G+ D Y + LL AC
Sbjct: 618 GKAFEYFTKIKESGLKLDVYIYETLLRAC------------------------------- 646
Query: 264 AASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRY 320
K+G ALAV R+ M K R Y+ +I +A G+ + + K+
Sbjct: 647 -----CKSGRMQSALAVTRE----MSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQM 697
Query: 321 KQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
K++ N + I++ K M+ AE + +E L +++ LI + R L
Sbjct: 698 KEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLP 757
Query: 380 HKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
+A + + G +P+ ++ + T L
Sbjct: 758 DRALKCFEEMKSAGLKPDEAAYHCLVTSLL 787
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 158/379 (41%), Gaps = 49/379 (12%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+L++ + G P++ ++I L RF AL M ++ L P D L
Sbjct: 418 VLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRN---LRPNDGL----LT 470
Query: 130 AKVQGIEQAASYFNCVPEKLKL------PSVYI--ALLNAYACAKSAEKAEIIMQQMRDR 181
V G+ +A V +L P++ AL++ A + ++ +++ M +R
Sbjct: 471 TLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLER 530
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
GLV I YN++++ + G K+ L EM +KGI D YTF++LL A
Sbjct: 531 GLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNA------ 584
Query: 242 DKIVAMMEADR--------GVVLDWTVYATAASGYVKAGLSDKALAVLRK--SEVLMMHN 291
DKI EA R G V + Y GY KA ++ +L + S+ L ++
Sbjct: 585 DKI---DEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELN- 640
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKI 350
S Y+ +I Y GN + R+ K + + + Y ++ L ++ A+ +
Sbjct: 641 --SVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHL 698
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY-- 408
+E L ++ +I Y + G ++K ++ + PN T+ +M G+
Sbjct: 699 LDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCK 758
Query: 409 ---------LQNNQSEKGV 418
L N +EKG+
Sbjct: 759 LGKTKEAAKLLNEMTEKGI 777
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 131/313 (41%), Gaps = 45/313 (14%)
Query: 145 VPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
V EK+ PS+ Y +N + ++A ++++M + G V + YN++++ Y + GN
Sbjct: 318 VKEKVS-PSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGN 376
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDG-------EGIDKIVAMMEADRGV 254
+ + +M KGI + T + L+ C + G E I + + + + +
Sbjct: 377 ISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSM 436
Query: 255 VLDWT--------------------------VYATAASGYVKAGLSDKALAVLRKSEVLM 288
V++W + T SG KAG +A+ + + +
Sbjct: 437 VINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCR----L 492
Query: 289 MHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGM 344
+ F + +I GN + L++ + + V++R Y +IS K +
Sbjct: 493 LGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKV 552
Query: 345 ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
+ ++ EE + + DI N L+ C + +A L ++ + G PNV T+ +M
Sbjct: 553 KEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVM 612
Query: 405 ATGYLQNNQSEKG 417
GY + N+ E+G
Sbjct: 613 IDGYCKANKVEEG 625
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 2/162 (1%)
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD 312
G++ D +++T + + K D A+ + K E L + Y+ +I G D+
Sbjct: 251 GIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVV-TYNNIIHGLCKSGRLDE 309
Query: 313 VLRV-WKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
R K K+ + Y I+ L+K + ++ A + +E + + N LID
Sbjct: 310 AYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLID 369
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
YC+ G + +A + +G PN T + G+ +++Q
Sbjct: 370 GYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQ 411
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 151 LPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
LP+V Y ++ Y+ K I++Q+M + Y M++ + + G K+
Sbjct: 708 LPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAK 767
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
L++EM EKGI D T++ + E K+ M + V LD Y T G
Sbjct: 768 LLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSG-AVCLDEITYTTLIDG 825
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 134/325 (41%), Gaps = 43/325 (13%)
Query: 106 SMWMTKKSNFVLTPADVAIRL--DLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNA 161
+M+ K +F +TP L + K IE A + +P +P++ Y +L
Sbjct: 176 AMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGG 235
Query: 162 YACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCD 221
Y E A+ ++++M DRG Y +M+ Y + G + + ++M +ME+ I+ +
Sbjct: 236 YVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPN 295
Query: 222 KYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV 280
+ T+ +++ A C GE + M+E R + D ++ + D+A +
Sbjct: 296 EVTYGVMIRALCKEKKSGEARNMFDEMLE--RSFMPDSSLCCKVIDALCEDHKVDEACGL 353
Query: 281 LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLK 340
RK M+ N C + +L +I L K
Sbjct: 354 WRK----MLKNN--------------CMPDNALLST-----------------LIHWLCK 378
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
+ A K+F+E+E ++ + N LI C +G L +A L R +PN T
Sbjct: 379 EGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFT 437
Query: 401 WYLMATGYLQNNQSEKGVEAMKKAL 425
+ ++ G +N ++GV +++ L
Sbjct: 438 YNVLIEGLSKNGNVKEGVRVLEEML 462
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 154/373 (41%), Gaps = 21/373 (5%)
Query: 100 SHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQG-IEQAASYFNCVPEKL--KLPSVYI 156
+ AL +++ N V TP L+ + +V G +E A F+ + +++ + P+ Y+
Sbjct: 103 NSALSYFKMVSQLPNIVHTPETCNYMLEFL-RVHGRVEDMAFVFDLMQKQVINRNPNTYL 161
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
+ A + +A + +MR G V YN ++ Q G K+ + M +
Sbjct: 162 TIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISE 221
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
G+ T+S L+ A D I ++ ME G+ + Y +AG D
Sbjct: 222 GLKPSMKTYSALMVALGRRRDTGTIMDLLEEMET-LGLRPNIYTYTICIRVLGRAGRIDD 280
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-----YKQNLKVYNRGY 331
A +L+ E Y +I A G D ++ + +K +L Y
Sbjct: 281 AYGILKTMEDEGCGPDVV-TYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTY---- 335
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
I ++S + +E+ ++ + E E+ D+ L++A C+ G + +A ++ ++
Sbjct: 336 ITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRV 395
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKE 451
RG PN+ T+ + +G L + ++ +E L A P+ + YY K
Sbjct: 396 RGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVA-----PTAYSYVLFIDYYGKL 450
Query: 452 RDIEGA-DYFIKL 463
D E A D F K+
Sbjct: 451 GDPEKALDTFEKM 463
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/329 (19%), Positives = 131/329 (39%), Gaps = 43/329 (13%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P Y L++ E A + +M++ G YN +++ + ++ +L L +
Sbjct: 788 PESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYN 847
Query: 212 EMEEKGIDCDKYTFSILLSACAAA-SDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
EM +G + T +I++SA + S + +D ++ D Y G +K
Sbjct: 848 EMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPT--PCTYGPLIGGLLK 905
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-----YKQNLK 325
AG S++A+ + + + Y+ +I + GN + ++KR + +LK
Sbjct: 906 AGRSEEAMKIFEEMPDYQCKPNCA-IYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLK 964
Query: 326 VY-------------------------------NRGYICVISSLLKFDGMESAEKIFEEW 354
Y Y +I+ L K +E A +F E
Sbjct: 965 SYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEM 1024
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
++R + ++ N LI + G++ +A + + Q G EPNV T+ + G+ ++
Sbjct: 1025 KNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNK 1084
Query: 415 EKGVEAMKKALVL---LEAGTRWKPSKEC 440
++ KK +++ AGT + +C
Sbjct: 1085 DRAFSVFKKMMIVGCSPNAGTFAQLPNKC 1113
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 312 DVLRVWKRYKQNLKVYN--RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
D +++ ++ ++L + Y C++ LL + E+A K+F E ++ C +I N L
Sbjct: 770 DAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLL 829
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+DA+ + + + L + RG +PN+ T ++ + +++N K ++
Sbjct: 830 LDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALD 879
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 66/345 (19%), Positives = 137/345 (39%), Gaps = 16/345 (4%)
Query: 135 IEQAASYFNCVPEKLKLPSVY--IALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+++A FN + P+ Y + ++ Y EKA ++M+ RG++ N+
Sbjct: 418 LDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNA 477
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+ + G ++ + +++ G+ D T+++++ + A + K++ M ++
Sbjct: 478 SLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSE- 536
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD 312
G D V + KAG D+A + + + L + Y+ +IT G
Sbjct: 537 GCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVV-TYNILITGLGKEGKLLK 595
Query: 313 VLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
L ++ K++ N + ++ L K D ++ A K+F N D+ N +I
Sbjct: 596 ALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIY 655
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL---VLL 428
+ G A Y + P+ T Y + G +++ + E ++ + + + L
Sbjct: 656 GLIKEGRAGYA-FWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQ 714
Query: 429 EAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISAD 473
+ W EC+ E +IE A F + L I D
Sbjct: 715 TSNQVWGELMECILI-------EAEIEEAISFAEGLVCNSICQDD 752
>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
Length = 410
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 134/335 (40%), Gaps = 9/335 (2%)
Query: 89 IIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEK 148
++++ + AL + TK + L A + + + + +A F+ +P
Sbjct: 8 VVRRLCVAAEVRSALAVLARGTKSGDAALDVAACTALVHVCCQSGDVAEARRVFDVMPRL 67
Query: 149 LKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKL 206
P+ Y AL+N Y E + +MR G+ YN ++ + +TG +K
Sbjct: 68 GVAPNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSA 127
Query: 207 DSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR--GVVLDWTVYATA 264
L EM KG+ + +++IL++ S + V + EA R G+ +
Sbjct: 128 RLLFDEMPVKGVVHNVVSYNILIAGLCRHSK---LKDAVQLFEAMRREGIRPSIVTFNLL 184
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-N 323
GY KAG AL + + + Y+ +I + + +R + K+
Sbjct: 185 IDGYGKAGKMANALHFFNQMKAAGLPPSVV-TYNELICGFCRVRDIARAVRAFLDMKERG 243
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
L Y +I++ K + M+ A + E E L D++ L+ A C G + A
Sbjct: 244 LAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHAR 303
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
L L+G +PN + +M GY + S K +
Sbjct: 304 KLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKAL 338
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 124/312 (39%), Gaps = 38/312 (12%)
Query: 151 LPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
+P+V Y L++ +AE A++ +MR +GL+ I YNS++N Y + GN K+
Sbjct: 332 VPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALC 391
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI-VAMMEAD---------------- 251
L +++ G+ T++IL+ D EG ++ M E D
Sbjct: 392 LFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSC 451
Query: 252 -----------------RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
+G+ D Y T S + G A LR+ +L + +
Sbjct: 452 MVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQ-LREEMMLRGISSDT 510
Query: 295 RAYDFVITQYAACGNKDDVLRVW-KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEE 353
Y+ +I G+ D +W K L++ Y C+I + + + A+ IF+
Sbjct: 511 VTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDG 570
Query: 354 WESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
+ L + I YCRRG L+ A K G EPN T+ ++ + +
Sbjct: 571 MVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGR 630
Query: 414 SEKGVEAMKKAL 425
+E + + L
Sbjct: 631 TESAYQHFHEML 642
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 106/243 (43%), Gaps = 18/243 (7%)
Query: 175 MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL-SACA 233
Q+M G+ + N ++ V + + ++ +M + G++ +T++ LL S C
Sbjct: 182 FQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCK 241
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF 293
A + + + M G + + Y +G + G +KA ++ +++ + K
Sbjct: 242 AGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLV---DIMRLSKKA 298
Query: 294 SR-AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-------YICVISSLLKFDGME 345
S Y+ +IT A +D V + L++ N G Y +I L K E
Sbjct: 299 SAFTYNPLITGLLA---RDFVEKAGALL---LEMENEGIVPTVVTYNTLIDGLFKTGNAE 352
Query: 346 SAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
+A+ F+E ++ L D+ N LI+ YC+ G L +A L + G P V T+ ++
Sbjct: 353 AAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILI 412
Query: 406 TGY 408
GY
Sbjct: 413 DGY 415
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 104/252 (41%), Gaps = 9/252 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+ EKA ++ +M + G+V + YN++++ ++TGN + EM
Sbjct: 302 TYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEM 361
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
KG+ D T++ L++ C A + + + + A G + Y GY + G
Sbjct: 362 RAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTV--LTYNILIDGYCRLG 419
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKD-DVLRVW--KRYKQNLKVYNR 329
+ A R E + + + I +C ++ ++R++ + + L+
Sbjct: 420 DLEGA---RRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCF 476
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y IS+ L + +A ++ EE R + D N LID C+ G L A L K
Sbjct: 477 AYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKM 536
Query: 390 QLRGTEPNVRTW 401
G + T+
Sbjct: 537 VTDGLRLDCVTY 548
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 102/272 (37%), Gaps = 17/272 (6%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
+C+P+ Y L+N ++ I +M +GL YN+ ++ G
Sbjct: 435 DCLPDV----CTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGA 490
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVY 261
L EM +GI D T+++L+ C S + ++ M G+ LD Y
Sbjct: 491 ITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAY--VLWMKMVTDGLRLDCVTY 548
Query: 262 ATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA---YDFVITQYAACGNKDDVLRVWK 318
+ + G +A + M+ + S + Y I Y GN + W
Sbjct: 549 TCLIHAHCERGRLIEAKNIFDG----MVASGLSPSVVTYTIFIHTYCRRGNLY-LAYGWF 603
Query: 319 R--YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRR 376
R ++ ++ Y ++ +L + ESA + F E R L + LID C+
Sbjct: 604 RKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKE 663
Query: 377 GLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
G A L + +G P+ T + G+
Sbjct: 664 GNWVHAIRLYCEMHQKGIHPDHCTHNALFKGF 695
>gi|326532582|dbj|BAK05220.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 144/329 (43%), Gaps = 23/329 (6%)
Query: 164 CAKSAEKAEIIMQ-QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDK 222
C + +K +I Q +M RG+ T YN++MNVY + ++ + L EM+EKG+ K
Sbjct: 354 CDEGMKKEALIFQSEMEKRGIPSNTSIYNTIMNVYCKCSQIEEAEGLFAEMKEKGLKPTK 413
Query: 223 YTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA-GLSDKAL-AV 280
T++IL+ A + E ++ ++ M D G + Y S Y + +S+KA A
Sbjct: 414 VTYNILMDAYSRRLQPEVVESLLLEMH-DLGFQPNARSYNCLISAYGRQKKMSEKAEDAF 472
Query: 281 LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLL 339
LR + + S +Y +I YA G + + K + LK Y ++
Sbjct: 473 LRMKKGGI--KATSSSYTSLICAYAVSGQYEKAHIAYLDMKREGLKPSLETYTALLDI-- 528
Query: 340 KFDGMESAEKIFEEWES----RNLCHDIRIPNHLI-DAYCRRGLLHKAETLIYKAQLRGT 394
F + EK+ E W+S + C R+ H++ D + GL +A +I + G
Sbjct: 529 -FRRAGNTEKLMETWKSMTDEKVGC--TRVTFHMVLDGLAKHGLFVQARDVICEFGKIGL 585
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDI 454
P T+ ++ Y + Q K + +K+ L KP + + Y + RD
Sbjct: 586 PPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTL-----ELKPDSVTYSTLIYAYARVRDF 640
Query: 455 EGADYFIK-LLTGKEIISADLQDRLLNNI 482
A Y+ K ++ ++ A +LLN +
Sbjct: 641 SRAFYYHKQMVRNGQVPDAKSYRKLLNTL 669
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 122/314 (38%), Gaps = 50/314 (15%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
+P L L + +AL+ + E EI+ +RG ++ + YN+ M+ G Y
Sbjct: 231 LPISLSLQTWLVALVVLGRARMADEILEILGSLPPERGF-REAVLYNAAMSGVAYCGRYD 289
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSAC----AAASDGEGIDKIVAMMEADRGVVLDWTV 260
+ ME+ + D T SI+L A+A D K M +GV V
Sbjct: 290 DAWKIFESMEKNNVQPDHVTSSIMLLVMKRRKASAKDSW---KFFQRMN-RKGVKWSLGV 345
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
A+ + G+ K E L+ ++ + +
Sbjct: 346 SASLIKIFCDEGM---------KKEALIFQSEMEK----------------------RGI 374
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
N +YN +++ K +E AE +F E + + L N L+DAY RR
Sbjct: 375 PSNTSIYN----TIMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSRRLQPE 430
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGY-LQNNQSEKGVEA---MKKALVLLEAGTRWKP 436
E+L+ + G +PN R++ + + Y Q SEK +A MKK + +A +
Sbjct: 431 VVESLLLEMHDLGFQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKKGGI--KATSSSYT 488
Query: 437 SKECLAACLGYYKK 450
S C A G Y+K
Sbjct: 489 SLICAYAVSGQYEK 502
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 138/305 (45%), Gaps = 20/305 (6%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
LDL+ +V G L P+V Y ++++ K +A + +M +G+
Sbjct: 210 LDLLQRVDG-------------NLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGI 256
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGID 242
+ Y+++++ + G K L ++M + I D YTF+IL++A C EG
Sbjct: 257 SPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG-- 314
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
K V M +G+ ++ Y + GY +KA ++ + N ++Y +I
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGV-NPDIQSYSIMIN 373
Query: 303 QYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
+ D+ + ++K +++N+ Y +I L K + A ++ ++ R +
Sbjct: 374 GFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPP 433
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
+I N ++DA C+ + KA L+ K + +G +P++ T+ ++ G Q+ + E +
Sbjct: 434 NICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVF 493
Query: 422 KKALV 426
+ LV
Sbjct: 494 EDLLV 498
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 132/299 (44%), Gaps = 20/299 (6%)
Query: 135 IEQAASYFN-CVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYN 191
++ A FN + E +K P VY L+NA+ ++ + + M +G+ + YN
Sbjct: 276 LKDAIDLFNKMILENIK-PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYN 334
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEA 250
S+M+ Y K S+ + M + G++ D ++SI+++ C E ++ M
Sbjct: 335 SLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHR- 393
Query: 251 DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYDFVITQYAA 306
+ ++ D Y++ G K+G AL ++ + MH++ Y+ ++
Sbjct: 394 -KNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ-----MHDRGVPPNICTYNSILDALCK 447
Query: 307 CGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
D + + ++K + + Y +I L + +E A K+FE+ + D+
Sbjct: 448 THQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYA 507
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL---QNNQSEKGVEAM 421
+I +C GL ++A L+ K + G P+ +T+ ++ +N+ +EK + M
Sbjct: 508 YTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 114/289 (39%), Gaps = 46/289 (15%)
Query: 135 IEQAASYFNCVPEKLKLPSVY--IALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
++ A S FN + + P + +L + +K + Q+M RG+ ++ N
Sbjct: 66 VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI---DKIVAMM 248
++N + Q G S+ ++ + G D TF+ L C + DK+VA+
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVAL- 184
Query: 249 EADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG 308
G D Y T G K G + AL +L++ + G
Sbjct: 185 ----GFHFDQISYGTLIHGLCKVGETRAALDLLQRVD----------------------G 218
Query: 309 NKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
N + N+ +YN +I S+ K + A +F E S+ + D+ +
Sbjct: 219 N---------LVQPNVVMYNT----IIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSA 265
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
LI +C G L A L K L +P+V T+ ++ + ++ + ++G
Sbjct: 266 LISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 5/269 (1%)
Query: 136 EQAASYFNCVPEKLKLPSVYIA--LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
+ A F+ + K +P V+ +L+ + + EKA ++ +M + + +N M
Sbjct: 138 DDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIM 197
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
+NV + G KK + ME GI + T++ ++ + EG I +M+ RG
Sbjct: 198 INVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKC-RG 256
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDV 313
V D Y + SG K G ++A +L K + + + + Y+ +I Y GN +
Sbjct: 257 VKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPT-AVTYNTLIDGYCNKGNLEMA 315
Query: 314 LRVW-KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
K ++ L Y +I +L M+ A+ I +E + L D N LI+
Sbjct: 316 FDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILING 375
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
YCR G + KA TL + +G +P T+
Sbjct: 376 YCRCGNVKKAFTLHDEMISKGIQPTRVTY 404
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 124/278 (44%), Gaps = 9/278 (3%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+E A Y + + + +P+V Y L++A ++A+ I+++M ++GLV ++ YN
Sbjct: 312 LEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNI 371
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
++N Y + GN KK +L EM KGI + T++ L+ + + D + + +
Sbjct: 372 LINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKI-VRK 430
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC--GNK 310
G+ D ++ G+ G D+A A+L++ + + + F C G
Sbjct: 431 GIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKV---VPDEVTFNTLMQGRCREGKV 487
Query: 311 DDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
+ + + K + +K + Y +IS K M+ A ++ +E S + N L
Sbjct: 488 EAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNAL 547
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
I C+ AE L+ + +G PN T+ + G
Sbjct: 548 IQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEG 585
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 117/279 (41%), Gaps = 15/279 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++ Y + E A +M GL+ YN +++ + + D ++ EM
Sbjct: 298 TYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEM 357
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGI---DKIVAMMEADRGVVLDWTVYATAASGYV 269
EKG+ D T++IL++ C + + D++++ V +Y + G +
Sbjct: 358 SEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRM 417
Query: 270 KAGLSDKALAVLRKSEV--LMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
K D ++RK L+M N +I + A GN D + K Q V
Sbjct: 418 KQA-DDLFEKIVRKGIFPDLIMFNA-------LIDGHCANGNMDRAFAMLKEMDQMKVVP 469
Query: 328 NR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
+ + ++ + +E+A ++ EE +SR + D N LI Y +RG + A +
Sbjct: 470 DEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVR 529
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
+ G P + T+ + G +N + + + +K+ +
Sbjct: 530 DEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMI 568
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 132/286 (46%), Gaps = 20/286 (6%)
Query: 151 LPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
+P V++ +L++ + EKA + +M G+ + YN+++N + G K
Sbjct: 658 VPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARE 717
Query: 209 LMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
L E+EEK + D T+S ++ C + + E M+ +G+ D +Y G
Sbjct: 718 LFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMIS--KGISPDGYIYCILIDG 775
Query: 268 YVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK-------DDVLRVWKRY 320
K G +KAL++ +++ + + A++ +I + G DD+ V K+
Sbjct: 776 CGKEGNLEKALSLFHEAQQKSVGSL--SAFNSLIDSFCKHGKVIEARELFDDM--VDKKL 831
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
N+ Y +I + K + ME AE++F + E+RN+ + L+ +Y + G
Sbjct: 832 TPNIVTYT----ILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRF 887
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
K +L + RG + + +MA+ Y + +S + ++ + K+LV
Sbjct: 888 KMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLV 933
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 112/272 (41%), Gaps = 9/272 (3%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P Y L++ + +KA ++ QM G+ Y +++ Y Q Y+ L+
Sbjct: 451 PFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLK 510
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
M G+ D + ++ L+ A E ++ M ++G+ + Y + Y K+
Sbjct: 511 IMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM-GEKGIKPNAHTYGAFINLYSKS 569
Query: 272 G---LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK-RYKQNLKVY 327
G ++++ + S ++ + Y +I + GN + L +K ++ L
Sbjct: 570 GEIQVAERYFKDMLSSGIV----PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPD 625
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
R Y +I SL K + A +F ++ + D+ + N LI +C+ G + KA L
Sbjct: 626 IRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYD 685
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+ G PN+ + + G + + K E
Sbjct: 686 EMLHNGINPNIVVYNTLINGLCKLGEVTKARE 717
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D K + +A F+ + +K P++ Y L++AY A+ E+AE + M R +
Sbjct: 807 IDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNI 866
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
+ T+ Y S++ Y Q GN K+ SL +ME +GI CD + ++ SA
Sbjct: 867 IPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASA 914
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 129/316 (40%), Gaps = 22/316 (6%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D K + ++A F +P P+ Y AL++ + + E+A I +M RGL
Sbjct: 318 VDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGL 377
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ YN+M+ + G K SL +EM G++ D +T+++L+ + D +
Sbjct: 378 KLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACE 437
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFV 300
++A M+A + +T Y+ SG + KA VL + M+ N Y +
Sbjct: 438 LLAEMKARKLTPSPFT-YSVLISGLCHSSDLQKANEVLDQ----MIRNGVKPNVFMYGTL 492
Query: 301 ITQYAACGNKDDVLRVWKRYKQN-----LKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
I Y + + + K N L YN C+I L + +E A+ + +
Sbjct: 493 IKAYVQESRYEMAIELLKIMIANGVLPDLFCYN----CLIIGLCRAKKVEEAKMLLVDMG 548
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+ + + I+ Y + G + AE G PN + ++ G+ +
Sbjct: 549 EKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNT- 607
Query: 416 KGVEAMKKALVLLEAG 431
VEA+ +LE G
Sbjct: 608 --VEALSTFKCMLEKG 621
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 142/341 (41%), Gaps = 13/341 (3%)
Query: 88 IIIKKFRLYKRFSHALQISMWMTKKSNF-VLTPADVAIRLDLIAKVQGIEQAASYFNCVP 146
I I KFR+ + A + + + F L + +R L A + G+ Y + V
Sbjct: 177 IFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKV-YGSMVE 235
Query: 147 EKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
K+ +P VY ++ A+ K ++++ +M ++ YN+ + QTG
Sbjct: 236 AKI-VPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVD 293
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYAT 263
+ + M EKG+ D +T+++L+ C E K++ G+ + Y
Sbjct: 294 EALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEA--KLIFESMPSSGLNPNRFTYTA 351
Query: 264 AASGYVKAGLSDKALAVLRKSEVLMMHNKFS-RAYDFVITQYAACGNKDDVLRVWKR-YK 321
G++K G ++AL + K E++ K + Y+ +I A G + ++
Sbjct: 352 LIDGFIKEGNIEEALRI--KDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409
Query: 322 QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
L+ Y +I LK M A ++ E ++R L + LI C L K
Sbjct: 410 AGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
A ++ + G +PNV + + Y+Q ++ E +E +K
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLK 510
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 123/309 (39%), Gaps = 45/309 (14%)
Query: 149 LKLPSV-YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLD 207
LKL V Y A++ A A KA + +M GL T YN +++ Y ++ + K
Sbjct: 377 LKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKAC 436
Query: 208 SLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
L+ EM+ + + +T+S+L+S +SD + ++++ M GV + +Y T
Sbjct: 437 ELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM-IRNGVKPNVFMYGTLIKA 495
Query: 268 YVKAGLSDKALAVLR----------------------------KSEVLMMH------NKF 293
YV+ + A+ +L+ ++++L++
Sbjct: 496 YVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPN 555
Query: 294 SRAYDFVITQYAACGNKDDVLRVWKRYKQNL-----KVYNRGYICVISSLLKFDGMESAE 348
+ Y I Y+ G ++V +RY +++ N Y +I A
Sbjct: 556 AHTYGAFINLYSKSGE----IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEAL 611
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
F+ + L DIR + +I + + G +A + K G P+V + + +G+
Sbjct: 612 STFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGF 671
Query: 409 LQNNQSEKG 417
+ EK
Sbjct: 672 CKEGDIEKA 680
>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 804
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 124/290 (42%), Gaps = 10/290 (3%)
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
K+ ++ A S+F V + +PSVY L+N S +A + M G+ +
Sbjct: 252 CKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDS 311
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVA 246
+ YN ++ ++ G ++ +M +KG+ D T++ILL C + G+ +
Sbjct: 312 VTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKD 371
Query: 247 MMEADRGVVLDWTV-YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
M+ RG L + Y+ SG K G D+AL++ E + AY VI
Sbjct: 372 MLS--RGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLV-AYSIVIHGLC 428
Query: 306 ACGNKDDVLRVWKR--YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
G D +RV+ YK+ L +R ++ L + + A + + S DI
Sbjct: 429 KLGKFDMAVRVYDEMCYKRILP-NSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDI 487
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
+ N +ID Y + G + +A L A G PNV T+ + GY +
Sbjct: 488 ILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQN 537
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 120/291 (41%), Gaps = 19/291 (6%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I +D AK IE+A F E P+V + +L+ Y ++ +A I+ ++
Sbjct: 492 IVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLY 551
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
GLV + Y ++M+ Y G+ K ++ L EM+ +GI T+S++ E
Sbjct: 552 GLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENC 611
Query: 242 DKIVAM------------MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
++++ ME++ G+ D Y T + +A + +K + +
Sbjct: 612 NQVLRERILEKFNHVLRDMESE-GITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNL 670
Query: 290 HNKFSRAYDFVITQYA--ACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESA 347
+ S Y+ +I C K D ++ K+N+ + Y VI + E A
Sbjct: 671 -DPTSATYNILIDSLCIYGCIRKADRF-LYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMA 728
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
+F + R IR + +I+ CRR L +++ RG P++
Sbjct: 729 VILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPDL 779
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 101/241 (41%), Gaps = 24/241 (9%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y +++ YA + E+A + + + G+ +NS++ Y +T N + ++ +
Sbjct: 489 LYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVI 548
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ G+ +++ L+ A A + I+++ M+A+ G+ Y+ G +
Sbjct: 549 KLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAE-GIPPTNVTYSVIFKGLCRGWK 607
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
+ VLR+ + ++ V+ + G D + YN
Sbjct: 608 LENCNQVLRE--------RILEKFNHVLRDMESEGITPDQI-----------TYNT---- 644
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+I L + + A ++F++ +S+NL N LID+ C G + KA+ +Y Q R
Sbjct: 645 IIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRN 704
Query: 394 T 394
Sbjct: 705 V 705
>gi|302142507|emb|CBI19710.3| unnamed protein product [Vitis vinifera]
Length = 747
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 163/395 (41%), Gaps = 31/395 (7%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHA-LQISMWMTKKSNFVLTPADVA 123
D PLLD+W E +P ++ + ++ RL + SH +++ + K +F D +
Sbjct: 333 DDPSPLLDEWAELLQPSRIDWITLLD---RLKENNSHLYFKVAELVLSKKSFQTNIRDYS 389
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIA--LLNAYACAKSAEKAEIIMQQMRDR 181
+D+ AK +E A + E LP + + L++ Y+ A + E+A+ + +R +
Sbjct: 390 KLIDVHAKENRVEDAERILKKMNENDILPDILTSTVLVHMYSKAGNLERAKEAFEGLRSQ 449
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
G T YNSM+ Y G K +SLM EME + I K + LL + A D G
Sbjct: 450 GFQPDTRVYNSMIMAYVNAGQPKLGESLMREMEARDIKPTKEIYMSLLQSFAQRGDIGGA 509
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM---HNKFSRAYD 298
+I M+ G Y +AG D+A R S M+ H R
Sbjct: 510 QRISTTMQF-AGFQPSLESCTLLVEAYGQAGDPDQA----RNSFDYMIKVGHRPDDRCTA 564
Query: 299 FVITQYAACGNKDDVLRVWKRY--KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWES 356
+I Y GN D K + Y+ ++ L K ++ AE++ +
Sbjct: 565 SMIAAYEK-GNLLDKALNLLLQLEKDGFEPGVATYVVLVDWLGKMQLVDEAEQLLGKIAE 623
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY-----LMATGYLQN 411
+ ++ L D Y R G+ KA + + + + N + L+A G++Q+
Sbjct: 624 QGEAPPLKFHVSLCDMYSRAGVEKKALQALGVVEAKKEQLNPEDFERIIKGLIAGGFVQD 683
Query: 412 NQSEKGV---------EAMKKALVLLEAGTRWKPS 437
+ GV E +K L+ +A R +P+
Sbjct: 684 ARRIHGVMETQGFTASEQLKIILMSSQAVGRERPT 718
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 126/282 (44%), Gaps = 7/282 (2%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
+P++L Y +LL+ A E A+ ++ +M R +V YN+ ++ + G
Sbjct: 316 MPDRL----TYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQID 371
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
+ EM K + + T+S ++ A A+ E + M+ R V LD Y T
Sbjct: 372 LARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKL-RSVCLDRVSYNTL 430
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QN 323
Y K G D+A+ ++ E + N+ Y+ +++ Y G D+V R+++ K +N
Sbjct: 431 VGIYEKLGNLDEAIEKCKEMERSGI-NRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARN 489
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
+ Y +I K + + A ++ E++ L D+ + +ID C+ GL+ +
Sbjct: 490 IYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAIIDTLCKNGLMESSI 549
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
L+ +G +PNV T+ + Q+ E GV A+
Sbjct: 550 MLLMAMMEKGIKPNVVTFNSIIDASQQSPTLEYGVNGSSDAI 591
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
LD + K I+ A F + K P+V Y A+++ YA A E A + ++M+ R +
Sbjct: 361 LDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSV 420
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ YN+++ +Y + GN + EME GI+ D T++ LLS + + +
Sbjct: 421 CLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRR 480
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
+ M+A R + + Y+T Y K + +A+ V R+
Sbjct: 481 LFEEMKA-RNIYPNTLTYSTMIDMYTKGEMFQEAMDVYRE 519
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 117/272 (43%), Gaps = 6/272 (2%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEM 213
+ A+++A+ A + + M G+V I YNS+++ + ++ + EM
Sbjct: 251 FSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSIIDAGAKGEVSFDVVVKFYDEM 310
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
G+ D+ T++ LLS CA+ E K+++ M+ R +V D Y T KAG
Sbjct: 311 IANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMD-HRCIVPDVFTYNTYLDTLCKAGQ 369
Query: 274 SDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GY 331
D A V + S + N + Y ++ YA +D L +++ K +R Y
Sbjct: 370 IDLARRVFEEMSSKRVWPNVVT--YSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSY 427
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
++ K ++ A + +E E + D+ N L+ Y + G+ + L + +
Sbjct: 428 NTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKA 487
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
R PN T+ M Y + ++ ++ ++
Sbjct: 488 RNIYPNTLTYSTMIDMYTKGEMFQEAMDVYRE 519
>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 376
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 121/258 (46%), Gaps = 20/258 (7%)
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS 230
AE + ++M + + + YN+M+N +++ G K L M +G + +F+ ++
Sbjct: 9 AERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSR-NVASFNTMMR 67
Query: 231 ACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLR--KSEV 286
++GE +D++ ++ E + G V D T Y G+ K G ++K+L VL K E
Sbjct: 68 --GLFNNGE-VDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQEG 124
Query: 287 LMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-----KQNLKVYNRGYICVISSLLKF 341
+ + AY +I+ G D + V K N +VYN +I+ LL
Sbjct: 125 GALD---AFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNA----LINGLLGA 177
Query: 342 DGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
E A ++F+E +R+ I N LI+ C+ +A L+ + +G P+V T+
Sbjct: 178 SKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITY 237
Query: 402 YLMATGYLQNNQSEKGVE 419
L+ G Q+++ E ++
Sbjct: 238 SLLIKGLCQDHKVEMALQ 255
>gi|225458257|ref|XP_002281331.1| PREDICTED: protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial-like
[Vitis vinifera]
Length = 720
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 163/395 (41%), Gaps = 31/395 (7%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHA-LQISMWMTKKSNFVLTPADVA 123
D PLLD+W E +P ++ + ++ RL + SH +++ + K +F D +
Sbjct: 333 DDPSPLLDEWAELLQPSRIDWITLLD---RLKENNSHLYFKVAELVLSKKSFQTNIRDYS 389
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIA--LLNAYACAKSAEKAEIIMQQMRDR 181
+D+ AK +E A + E LP + + L++ Y+ A + E+A+ + +R +
Sbjct: 390 KLIDVHAKENRVEDAERILKKMNENDILPDILTSTVLVHMYSKAGNLERAKEAFEGLRSQ 449
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
G T YNSM+ Y G K +SLM EME + I K + LL + A D G
Sbjct: 450 GFQPDTRVYNSMIMAYVNAGQPKLGESLMREMEARDIKPTKEIYMSLLQSFAQRGDIGGA 509
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM---HNKFSRAYD 298
+I M+ G Y +AG D+A R S M+ H R
Sbjct: 510 QRISTTMQF-AGFQPSLESCTLLVEAYGQAGDPDQA----RNSFDYMIKVGHRPDDRCTA 564
Query: 299 FVITQYAACGNKDDVLRVWKRY--KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWES 356
+I Y GN D K + Y+ ++ L K ++ AE++ +
Sbjct: 565 SMIAAYEK-GNLLDKALNLLLQLEKDGFEPGVATYVVLVDWLGKMQLVDEAEQLLGKIAE 623
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY-----LMATGYLQN 411
+ ++ L D Y R G+ KA + + + + N + L+A G++Q+
Sbjct: 624 QGEAPPLKFHVSLCDMYSRAGVEKKALQALGVVEAKKEQLNPEDFERIIKGLIAGGFVQD 683
Query: 412 NQSEKGV---------EAMKKALVLLEAGTRWKPS 437
+ GV E +K L+ +A R +P+
Sbjct: 684 ARRIHGVMETQGFTASEQLKIILMSSQAVGRERPT 718
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 128/262 (48%), Gaps = 16/262 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++ A++NA+ ++ E+A QM RGLV + +N+++ + ++ ++K + +E
Sbjct: 84 IHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE- 142
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ + D Y+F I++ C + +++ ME + G+ + VY T G K G
Sbjct: 143 TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQME-EMGLSPNVVVYTTLIDGCCKNGD 201
Query: 274 SDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-----QNLKVY 327
++ + K E+ ++ N+++ Y +I + G K D + ++++ K N+ Y
Sbjct: 202 IERGKQLFYKMGELDVVANQYT--YTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 259
Query: 328 NRGYICVISSLLKFDG-MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
N IC + DG + +A ++F+E R + ++ N LI C+ + +AE L+
Sbjct: 260 NS-MICRCCN----DGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLM 314
Query: 387 YKAQLRGTEPNVRTWYLMATGY 408
+ + G PN+ ++ + GY
Sbjct: 315 CRMKRDGLSPNLISYNTLIDGY 336
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 111/270 (41%), Gaps = 3/270 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N + + + ++M+ G+V YNSM+ G L EM
Sbjct: 224 YTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMR 283
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
E+G+ C+ T++ L+ ++++ M+ D G+ + Y T GY G
Sbjct: 284 ERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD-GLSPNLISYNTLIDGYCSIGNL 342
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYIC 333
DKA ++ + + + Y+ +I ++ N V + + + + L Y
Sbjct: 343 DKASSLFNQMKSSGQSPSLA-TYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTI 401
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
++ +L++ D +E A +I+ E L DI I LI C G + +A L
Sbjct: 402 LMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMH 461
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+PN + M GY + S + + +K+
Sbjct: 462 LKPNDVIYNTMIYGYCKEGSSYRALRLLKE 491
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 99/247 (40%), Gaps = 36/247 (14%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+ + +AE +M +M+ GL I YN++++ Y GN K SL ++M+
Sbjct: 294 YNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMK 353
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
G T++IL++ + A + G+ +V MEA RG+ Y V++
Sbjct: 354 SSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEA-RGLSPSKVTYTILMDALVRSDNI 412
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
+KA + E K D I Y +
Sbjct: 413 EKAFQIYSSME------KAGLVADIYI-----------------------------YGVL 437
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I L M+ A K+F+ + +L + I N +I YC+ G ++A L+ + G
Sbjct: 438 IHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGM 497
Query: 395 EPNVRTW 401
PNV ++
Sbjct: 498 VPNVASY 504
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + +++A+S FN + + PS+ Y L+ ++ AK++ ++++M RGL
Sbjct: 333 IDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGL 392
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ Y +M+ ++ N +K + ME+ G+ D Y + +L+ D + K
Sbjct: 393 SPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASK 452
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
+ ++ + + + +Y T GY K G S +AL +L++
Sbjct: 453 LFKSLD-EMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKE 491
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 123/275 (44%), Gaps = 5/275 (1%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K Q +++A + + +P Y ++++ + + ++A + +++MR G+
Sbjct: 57 LCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPD 116
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ YNS+M+ + G + + M ++G+ D T+ LL A + ++
Sbjct: 117 VVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLD 176
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
+M G+ + V++ Y K ++A+ V K + N + Y VI
Sbjct: 177 LM-VRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGL-NPNAVTYGTVIDVLCK 234
Query: 307 CGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
G +D + +++ + L+ + Y +I SL FD E AE++F E R +C
Sbjct: 235 SGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIF 294
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
N +ID++C+ G + ++ L G +P++ T
Sbjct: 295 FNSIIDSHCKEGRVIESVKLFDLMVRIGVKPDIIT 329
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 7/277 (2%)
Query: 136 EQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
E S F + +K P+V + L+N + +KA +++QM + G V + YN++
Sbjct: 966 ELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTL 1025
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
+N Y + G YK L+ M KGI+ D T+++ + ++ M +
Sbjct: 1026 LNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEM- 1084
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDD 312
+ + Y T +G+VK G A V + S+ + N + Y+ +I + G+ ++
Sbjct: 1085 ISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVT--YNALIGGHCHVGDFEE 1142
Query: 313 VLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
LR+ + L++ Y +++ L K + E A+++ E ++ LID
Sbjct: 1143 ALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLID 1202
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
C+ G+L +A L+ G P+V T+ + G+
Sbjct: 1203 GLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGF 1239
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 8/243 (3%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+AE + M GLV +I Y+ ++N Y G+ S +M + G +T+ LL
Sbjct: 1317 EAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLL 1376
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
+ K + + G V D +Y T + K+G +A+A+ K ++
Sbjct: 1377 KGLCKGGNLVEAKKFLNRLHYIPGAV-DSVMYNTLLAETCKSGNLHEAVALFDK---MVQ 1432
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVW----KRYKQNLKVYNRGYICVISSLLKFDGME 345
+N +Y + C V V + L + Y C++ L K +
Sbjct: 1433 NNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPK 1492
Query: 346 SAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
+A FEE + C D N +ID+ RRG + KA + G PN+ T+ ++
Sbjct: 1493 AAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILL 1552
Query: 406 TGY 408
G+
Sbjct: 1553 HGF 1555
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 100/258 (38%), Gaps = 9/258 (3%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N + A + +M L + YN+++ + G++++ L+ ME
Sbjct: 1092 YNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHME 1151
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
G+ ++ T+ LL+ E +++ M + VV Y G K G+
Sbjct: 1152 AAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVV-GHIAYTVLIDGLCKNGML 1210
Query: 275 DKALAV---LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRG 330
D+A+ + + K V N Y +I + GN + R Y+ L +
Sbjct: 1211 DEAVQLVGNMYKDGV----NPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKII 1266
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I + + + A K++ D N L+ + CR G L +AE +
Sbjct: 1267 YSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMS 1326
Query: 391 LRGTEPNVRTWYLMATGY 408
G PN T+ + GY
Sbjct: 1327 RIGLVPNSITYDCIINGY 1344
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 104/256 (40%), Gaps = 6/256 (2%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +L+N + + + A+ I+ +M GLV I Y++++ + Q GN + + M
Sbjct: 1232 YSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMN 1291
Query: 215 EKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
G D +T ++L+S+ C GE +K + M + G+V + Y +GY G
Sbjct: 1292 CNGHGADHFTCNVLVSSLCRDGKLGEA-EKFLCHM-SRIGLVPNSITYDCIINGYGSIGD 1349
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYI 332
A + H F Y ++ GN + + R + V + Y
Sbjct: 1350 PLNAFSFFDDMIKCGQHPSF-FTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYN 1408
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+++ K + A +F++ N+ D + L+ CR+G A L A R
Sbjct: 1409 TLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGR 1468
Query: 393 GT-EPNVRTWYLMATG 407
GT PN + + G
Sbjct: 1469 GTLFPNHVMYTCLVDG 1484
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 98/267 (36%), Gaps = 40/267 (14%)
Query: 152 PSVYIA--LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PSVY +L + K E + ++M D+G+ +N ++N GN KK +L
Sbjct: 947 PSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNL 1006
Query: 210 MHEMEEKGIDCDKYTFSILLS-ACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ +MEE G T++ LL+ C I+ I M+ +G+ D Y
Sbjct: 1007 LKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMI--CKGIEADVCTYNVFIDNL 1064
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
S KA +L+K M+ N YN
Sbjct: 1065 CTNHRSAKAYLLLKKMRKEMI-------------------------------SPNEVTYN 1093
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+I+ +K + A ++F E +L + N LI +C G +A L+
Sbjct: 1094 T----LINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDH 1149
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSE 415
+ G N T+ + G ++ + E
Sbjct: 1150 MEAAGLRLNEVTYGTLLNGLCKHEKFE 1176
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 100/258 (38%), Gaps = 45/258 (17%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
L+N Y+ + KA ++ M G+ YN + N + +++ ++HEM E G
Sbjct: 1621 LINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENG 1680
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAAS----GYVKAGL 273
+ + L++ D +G K+ MEA L + + A S G + G
Sbjct: 1681 VIPKHAQYITLINGMCRVGDIQGAFKLKDEMEA-----LGFGSHEVAESAMVRGLLHCGK 1735
Query: 274 SDKALAVLRK-----------SEVLMMHNKFSRAYDFVITQ-------YAACGNKDDVLR 315
++ A+ VL + +MH +F R D I + CG K DV+
Sbjct: 1736 TEDAMLVLDHMLRMRLLPTIATFTTLMH-RFCR--DAKIAEALKLKGVMELCGLKLDVV- 1791
Query: 316 VWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
Y +I + +A +++EE R+LC +I L+DA
Sbjct: 1792 --------------AYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISA 1837
Query: 376 RGLLHKAETLIYKAQLRG 393
L + E L+ Q RG
Sbjct: 1838 ANNLIQGEKLLTDLQERG 1855
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 72/180 (40%), Gaps = 24/180 (13%)
Query: 260 VYATAASGYVKAGLSDKALAVLRK---------------SEVLMMHNKFSRAYDFVITQY 304
+Y A VKA + D A ++LR + + N +D +I Y
Sbjct: 865 MYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVY 924
Query: 305 AACGNKDDVLRVWK-----RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
G D + ++ +K ++ N +++S++K E +F E + +
Sbjct: 925 LKEGMIDYAVETFELVGLVGFKPSVYTCNM----ILASMVKDKRTELVWSLFREMSDKGI 980
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
C ++ N LI+ C G L KA L+ + + G P + T+ + Y + + + +E
Sbjct: 981 CPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIE 1040
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 138/312 (44%), Gaps = 21/312 (6%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
AL+ ++ +A II+ ++ +G+ TI YN++M+ Y ++ ++ + L EM+ K
Sbjct: 336 ALIKSFCVEGLMSEALIILSELEKKGVSSNTIVYNTLMDAYCKSNRVEEAEGLFVEMKTK 395
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK----AG 272
GI + TF+IL+ A + E ++K++A M+ + G+ + Y S Y K +
Sbjct: 396 GIKPTEATFNILMYAYSRKMQPEIVEKLMAEMQ-ETGLKPNAKSYTCIISAYGKQKNMSD 454
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGY 331
++ A ++K + S +Y +I Y+ G + ++ ++ +K Y
Sbjct: 455 MAADAFLKMKKDGI----KPTSHSYTALIHAYSVSGWHEKAYAAFENMQREGIKPSIETY 510
Query: 332 ICVISSLLKFDGMESAEKIFEEWE--SRNLCHDIRIP-NHLIDAYCRRGLLHKAETLIYK 388
++ + + ++ KI W+ R R+ N L+D + + G +A +I K
Sbjct: 511 TALLDAFRRAGDTQTLMKI---WKLMRREKVEGTRVTFNTLVDGFAKHGYYKEARDVISK 567
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYY 448
G P V T+ ++ Y + + K E +++ A KP + + +
Sbjct: 568 FANVGLHPTVMTYNMLMNAYARGGRHSKLPELLEEM-----AAHNLKPDSVTYSTMIYAF 622
Query: 449 KKERDIEGADYF 460
+ RD A ++
Sbjct: 623 LRVRDFSQAFFY 634
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 112/256 (43%), Gaps = 12/256 (4%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
E A ++++QMRD G + + YN++++ +++ ++ L+ EM E G T++ L
Sbjct: 595 EDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTL 654
Query: 229 LSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK--- 283
C D+ V +++ A RG + Y++ G KAG +AL K
Sbjct: 655 ---CHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMAR 711
Query: 284 SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFD 342
EV+ H AY +I G D+ +R + ++ + + +I+ L
Sbjct: 712 DEVVAPH---VIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAG 768
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
+++ ++F R DI N +I+AYC +G A L+ + + G N T
Sbjct: 769 RIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHG 828
Query: 403 LMATGYLQNNQSEKGV 418
++ N++ ++ V
Sbjct: 829 IVIKALCGNDRIDEAV 844
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 125/276 (45%), Gaps = 28/276 (10%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y A++NAY A ++++M+ G+ K T+ + ++ + S H +
Sbjct: 792 YNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIP 851
Query: 215 EKGIDC-DKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E DC D+ +++ L+++ A+ E +++ M AD G D Y T G KAG
Sbjct: 852 E---DCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSP-DACNYMTVMDGLFKAGS 907
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYA-------ACGNKDDVLRVWKRYKQNLKV 326
+ A +L++ H+ R Y +I+ + AC +++LR K K + V
Sbjct: 908 PEVAAKLLQEMRS-RGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLR--KNLKPDAIV 964
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWE---SRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
Y SSL+ D A+K+ + W+ S + I + + ++D+ C+ KA
Sbjct: 965 Y--------SSLI--DAFCKADKVDDAWKLLRSSGIEPTITMYSTMVDSLCKNRGTDKAL 1014
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+I + + + EP + W +AT Y+ + ++ V+
Sbjct: 1015 EVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVK 1050
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 150/364 (41%), Gaps = 14/364 (3%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D V +LD G + I+ R + AL M + V+ P +A
Sbjct: 665 DEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDE--VVAPHVIAY 722
Query: 125 R--LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRD 180
+D + K I++A + + ++P V + L+N A + + M +
Sbjct: 723 SALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAE 782
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
RG YN+M+N Y G + +L+ EM+ GI + T I++ A +
Sbjct: 783 RGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCG---NDR 839
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
ID+ V+ + D Y T + V + S++AL +LR + V + + Y V
Sbjct: 840 IDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLR-AMVADGGSPDACNYMTV 898
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNL 359
+ G+ + ++ + + + R Y +IS L K + A FEE +NL
Sbjct: 899 MDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNL 958
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
D + + LIDA+C+ + A L+ + G EP + + M +N ++K +E
Sbjct: 959 KPDAIVYSSLIDAFCKADKVDDAWKLLRSS---GIEPTITMYSTMVDSLCKNRGTDKALE 1015
Query: 420 AMKK 423
+++
Sbjct: 1016 VIRE 1019
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 127/327 (38%), Gaps = 42/327 (12%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D+ + L E G D+ +I + L FS A + M K I
Sbjct: 771 DTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEM-KTHGIAKNTVTHGI 829
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
+ + I++A SYF+ +PE + Y L+ + ++ +E+A +++ M G
Sbjct: 830 VIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGS 889
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE-GIDK 243
+Y ++M+ ++ G+ + L+ EM +G D T++I++S + A D
Sbjct: 890 PDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDY 949
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ 303
M+ + + D VY++ + KA D A +LR S + + IT
Sbjct: 950 FEEMLR--KNLKPDAIVYSSLIDAFCKADKVDDAWKLLRSSGI-----------EPTITM 996
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
Y+ ++ SL K G + A ++ E +S+N I
Sbjct: 997 YST---------------------------MVDSLCKNRGTDKALEVIREMKSKNCEPGI 1029
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQ 390
I L AY G + +A L+ Q
Sbjct: 1030 HIWTSLATAYVAEGRVDEAVKLVNDLQ 1056
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/276 (18%), Positives = 112/276 (40%), Gaps = 12/276 (4%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y +++ +K ++++M RG + YN+++N G K+ SL
Sbjct: 34 PTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSL 93
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+ M G + TF +++ + E ++V M DRG V D ++
Sbjct: 94 LERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEM-VDRGFVPDVEIHTVLLHALC 152
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD---VLRVWKRYKQNLKV 326
+ G D+A ++ +L+ + Y+ ++ G + VL++ + V
Sbjct: 153 ELGRVDEAWFFFQQV-LLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTV 211
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
+ + + L K + A + F+ + + + LID C+ G L A L+
Sbjct: 212 FT--FTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLL 269
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ ++ + + + G Q ++ E+ ++ +K
Sbjct: 270 RD---KNSQAGMFAFSSLLHGLCQAHRLEEAIQLLK 302
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 113/293 (38%), Gaps = 35/293 (11%)
Query: 168 AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSI 227
A + E +Q ++ V + +NS+MN Q + L M+E G D T++I
Sbjct: 291 AHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNI 350
Query: 228 LLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
LL + V +M G + ++T G AG ++A V + +
Sbjct: 351 LLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAV 410
Query: 288 --MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG--------------- 330
+ N+F+ Y F++ G D R+ + ++Q L+ R
Sbjct: 411 EGISPNRFT--YAFLLEGLCKAG---DSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLM 465
Query: 331 ----------YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
Y +++ L K + A + E L D+ N ++D C+ +
Sbjct: 466 VQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRIL 525
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTR 433
A + +A RG PNV T+ + G + + ++ ++ + K ++E G R
Sbjct: 526 DAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAK---MVELGCR 575
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 108/299 (36%), Gaps = 56/299 (18%)
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEE-KGIDCDKYTFSILLSACAAASD 237
R G + +++++ G + + M +GI +++T++ LL A D
Sbjct: 373 RTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGD 432
Query: 238 GEGIDKIV-AMMEADRGVVLDWTV-------------------YATAASGYVKAGLSDKA 277
+++ M+E + W + Y T +G K+G+ A
Sbjct: 433 SRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDA 492
Query: 278 LAVL-----------------------RKSEVLMMHNKFSRA-----------YDFVITQ 303
L +L ++ +L HN F RA Y +I
Sbjct: 493 LGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDG 552
Query: 304 YAACGNKDDVLRVW-KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
+ D+ L++ K + + Y V+ LLK ME A + + D
Sbjct: 553 LSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPD 612
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
N LID + +R L +A L+ + G P+V T+ + G ++ + ++ VE +
Sbjct: 613 AVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEIL 671
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 102/259 (39%), Gaps = 16/259 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++ LL+A ++A QQ+ G + YN+M++ Y+ G + ++ +
Sbjct: 143 IHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLL 202
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E +TF+I + + A + G + M GV + Y G KAG
Sbjct: 203 AESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSM-PQTGVSPNTVTYDALIDGLCKAGK 261
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK--DDVLRVWKRYK--QNLKVYNR 329
D AL +LR N + + F + C ++ +++ K N+ +N
Sbjct: 262 LDIALGLLRD------KNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNS 315
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR-RGLLHKAETLIYK 388
+++ L + ++ A ++F+ + D+ N L+ C+ R + +
Sbjct: 316 ----LMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELM 371
Query: 389 AQLRGTEPNVRTWYLMATG 407
+ G PNV T+ + G
Sbjct: 372 RRTEGCSPNVVTFSTLIQG 390
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 167/398 (41%), Gaps = 55/398 (13%)
Query: 102 ALQISMWMTKKSNFVLTPADVAIRLDLIAKV------QGIEQAASYFNCVPEKLKLPSVY 155
AL++ W +K+ NF + L + KV + I Q +C ++ V
Sbjct: 70 ALRLLSWASKQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDR----GVL 125
Query: 156 IALLNAYACAKSAEKAEIIMQQMR-DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ +++YA + E+ I++ M + GL T+ YN ++NV K ++++ M
Sbjct: 126 LIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMV 185
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAG 272
KGI D TF+IL+ A A I + +ME + G+V D + T G+++ G
Sbjct: 186 SKGIKPDVSTFNILIKALCKAHQ---IRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEG 242
Query: 273 LSDKALAVLRKSEVL------------------MMHNKFSRAYDFVITQYAACGNKDDVL 314
D A V K ++L + A F I + + G +
Sbjct: 243 NMDGAFRV--KEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSF-IDEMSNEGKHTMAI 299
Query: 315 RVWKRYKQNLKVYNRG-------YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
++ K N+G Y +I SL ++ A + E E ++ N
Sbjct: 300 ELYNEMK------NKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYN 353
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVL 427
LID +C+ + +AE + + +++G N T+ + G ++ + ++ + M + ++
Sbjct: 354 TLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQ--MI 411
Query: 428 LEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLT 465
+E KP K + L Y+ +E DI+ A ++ +T
Sbjct: 412 MEG---LKPDKFTYNSMLTYFCREGDIQKAADIVQTMT 446
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 107/260 (41%), Gaps = 47/260 (18%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++ + K E+AE I QM +GL + ++ YN++++ ++ ++ LM +M
Sbjct: 351 TYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQM 410
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+G+ DK+T++ +L+ D + IV M ++ G D Y T G KAG
Sbjct: 411 IMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSN-GCEPDIVTYGTLIGGLCKAGR 469
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
+ A +LR ++ M V+T +A Y
Sbjct: 470 VEVASRLLRSIQLKGM----------VLTPHA-------------------------YNP 494
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL------LHKAETLIY 387
VI +L K + A ++F E E + P+ RGL + +A +
Sbjct: 495 VIQALFKRKRTKEAMRLFREMEEKG-----NTPDAFTYKIVFRGLSNSGGPIGEAVDFVI 549
Query: 388 KAQLRGTEPNVRTWYLMATG 407
+ +G P ++Y++A G
Sbjct: 550 EMIEKGFLPEFSSFYMLAEG 569
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 11/169 (6%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
I K I Q + C P+ + Y L+ A E A +++ ++ +G+V
Sbjct: 435 IQKAADIVQTMTSNGCEPDIV----TYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPH 490
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD--GEGIDKIVA 246
YN ++ ++ K+ L EMEEKG D +T+ I+ + + GE +D ++
Sbjct: 491 AYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIE 550
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR 295
M+E +G + +++ + A G + D +++ +++M FS+
Sbjct: 551 MIE--KGFLPEFSSFYMLAEGLCSLSMED---TLIKLVDLVMEKANFSQ 594
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 151/354 (42%), Gaps = 30/354 (8%)
Query: 64 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA 123
++++ LL + E G D +IK R AL + + MTK
Sbjct: 217 DEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYT 276
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
+ + + I +A + FN + +K +P+V Y ++++A A++ +KAE++++QM D
Sbjct: 277 MVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDN 336
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL-SACAAASDGEG 240
+ + Y +M++ Y G +K+ + EM +G+ D TF+ L+ S C E
Sbjct: 337 SIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEA 396
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF------- 293
+ ++ A +G D Y+ GY G + M+N F
Sbjct: 397 AEIFHSI--ATKGHKPDIISYSILLHGYATEG------------RFVDMNNLFHSMTDNG 442
Query: 294 ----SRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAE 348
S ++ +I +A G D+ L ++ + Q + Y VI++L + + A
Sbjct: 443 IVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAM 502
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG-TEPNVRTW 401
+ + S L + + + LI +C G L KA+ L+ + +G PN+ +
Sbjct: 503 EKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFF 556
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 130/324 (40%), Gaps = 52/324 (16%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y A+++ Y+C ++A + ++M GL+ + +NS+M+ + K+ + H +
Sbjct: 345 YTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIA 404
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
KG D ++SILL A ++ + M D G+V D + + + K G+
Sbjct: 405 TKGHKPDIISYSILLHGYATEGRFVDMNNLFHSM-TDNGIVADSHCFNILINAHAKRGMM 463
Query: 275 DKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKR-----YKQNLKV 326
D+AL + + M S Y VI G D + + K N V
Sbjct: 464 DEALLIFTE----MRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVV 519
Query: 327 YN---RGYICVISSLLKF---------DGMESAEKIFEEWESRNLCHDIRI--------- 365
Y+ +G+ C L+K G+ F +LC++ R+
Sbjct: 520 YHSLIQGF-CTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNL 578
Query: 366 -------P-----NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
P N LID YC G + KA ++ GTEP+V T+ + GY ++ +
Sbjct: 579 VIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGR 638
Query: 414 SEKGVEAMKKALVLLEAGTRWKPS 437
+ G+ ++ L R KP+
Sbjct: 639 IDDGLILFREMLC-----KRVKPT 657
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 109/264 (41%), Gaps = 9/264 (3%)
Query: 135 IEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+ A FN V P ++ +L++ Y +KA ++ M G + Y++
Sbjct: 569 VMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYST 628
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
++N Y+++G L EM K + T+S++L A K+ M +
Sbjct: 629 LINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEM-IES 687
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA-YDFVITQYAACGNKD 311
G + + Y G + +D+A+ + K + M+ KF A + +I ++
Sbjct: 688 GTAMSISTYTIILQGLCRNNCTDEAITLFHK--LGAMNLKFEIAILNTMIHALYKVKRRE 745
Query: 312 DVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+ ++ + V N Y +I +LLK +E A+ +F E R+ N +I
Sbjct: 746 EAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDII 805
Query: 371 DAYCRRGLLHKAETLIYKAQLRGT 394
++G + KA Y +++ GT
Sbjct: 806 RMLLQKGEIVKAG--YYMSKVDGT 827
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 119/262 (45%), Gaps = 16/262 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y ++NAY + S ++A + M G V + +N+++ + ++ + K + +E+
Sbjct: 91 LYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNEL 150
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ K + D Y+F I++ C A +++AM+E + G+ + +Y T G K G
Sbjct: 151 KSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLE-EFGLSPNVVIYTTLIDGCCKDG- 207
Query: 274 SDKALAVLRKSEVLMMHNKFS-----RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
V+ + N+ Y ++ + G + + ++++ K++ V N
Sbjct: 208 -----NVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPN 262
Query: 329 R-GYICVISSLLKFDGM-ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
Y C+IS DGM + A K+F E + + + N LI CR +A L+
Sbjct: 263 AYAYNCLISEYCN-DGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLV 321
Query: 387 YKAQLRGTEPNVRTWYLMATGY 408
+K G PN+ T+ ++ G+
Sbjct: 322 HKVNKVGLSPNIVTYNILINGF 343
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 107/274 (39%), Gaps = 5/274 (1%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P Y L+N + + + + M+ G+V YN +++ Y G K +
Sbjct: 228 PHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFA 287
Query: 212 EMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
EM EKGI C T++IL+ C GE + + + + G+ + Y +G+
Sbjct: 288 EMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKV--GLSPNIVTYNILINGFCD 345
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR- 329
D A+ + + + + Y+ +I Y+ N L + K ++ ++
Sbjct: 346 VRKMDSAVRLFNQLKSSGLSPTLV-TYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKV 404
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +I + + + E A ++ E L D+ + L+ C G + +A L
Sbjct: 405 TYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSL 464
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+PN + M GY + S + + + +
Sbjct: 465 GEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNE 498
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 2/188 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N + + + A + Q++ GL + YN+++ Y + N L+ EME
Sbjct: 336 YNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEME 395
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
E+ I K T++IL+ A A + E ++ ++ME G+V D Y+ G G +
Sbjct: 396 ERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKS-GLVPDVYTYSVLLHGLCVHG-N 453
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
K + L KS M S Y+ +I Y G+ LR+ Q+ V N C
Sbjct: 454 MKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCS 513
Query: 335 ISSLLKFD 342
LL D
Sbjct: 514 TIGLLCRD 521
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 116/283 (40%), Gaps = 10/283 (3%)
Query: 132 VQG-IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
V+G E A + F + LPS Y ++ + +KA +I +M G I
Sbjct: 389 VEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVI 448
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV-AM 247
YN+++ Y + GN L+ M+ G+ D +T++ L+S + E + M
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC 307
ME G+ + Y GY D ALA+ K V + S+ Y+ +I+ ++
Sbjct: 509 ME--HGISPNHVTYTAIIDGYFNLAKVDDALALFWKM-VESGNLPSSQTYNVMISGFSKT 565
Query: 308 GNKDDVLRVW-KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
+ + K KQ L Y I L + A KIF E E RN ++
Sbjct: 566 NSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTY 625
Query: 367 NHLIDAYCRRGLLHKAE--TLIYKAQLRGTEPNVRTWYLMATG 407
+ LI C+ G AE L+ + G EPNV T+ + G
Sbjct: 626 SSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKG 668
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 108/273 (39%), Gaps = 41/273 (15%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y +L+ + + + A + +M G ++ Y++++N G ++ ++ EM
Sbjct: 239 TYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEM 298
Query: 214 EEKGIDCDKYTFSI-LLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+KGI+ YT++I L+S C A E ++ + M + RG V + + SG + G
Sbjct: 299 VQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKK--RGCVPNIQTFTALISGLSRDG 356
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYI 332
+ A+ + H + Y A N+ L V R+
Sbjct: 357 KFEIAIG--------LYHKMLADGLVPTTVTYNALINQ---LCVEGRF------------ 393
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
E+A IF+ S + N +I +C G + KA + K
Sbjct: 394 ------------ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKA 441
Query: 393 GTEPNVRTWYLMATGYLQN---NQSEKGVEAMK 422
G+ PNV T+ + GY + N + + +E MK
Sbjct: 442 GSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK 474
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 132/329 (40%), Gaps = 22/329 (6%)
Query: 89 IIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LDLIAKVQGIEQAASYFNCVP 146
+I F + HA + M + ++P V +D + ++ A + F +
Sbjct: 488 LISGFSRGGKLEHATSLFYGMMEHG---ISPNHVTYTAIIDGYFNLAKVDDALALFWKMV 544
Query: 147 EKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
E LPS Y +++ ++ S +AE +M +GL+ I Y S ++ + G
Sbjct: 545 ESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTG 604
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAA---ASDGEGIDKIVAMMEADRGVVLDWTVY 261
+ HEME++ + YT+S L+ A D E + + + G + Y
Sbjct: 605 LAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARL--THYGCEPNVDTY 662
Query: 262 ATAASGYVKAGLSDKA--LAVLRKSEVLMMHNKFSRAYDFVITQYAACGN--KDDVLRVW 317
T G G +A L V + + L + RA +I + C N + L ++
Sbjct: 663 TTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRA--LLIGE---CKNLKVESALNIF 717
Query: 318 KRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRR 376
+++ Y +I +L K + +E A+ IF+ ++ D + L+D +
Sbjct: 718 YSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKE 777
Query: 377 GLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
G L++ + R N +T+ ++A
Sbjct: 778 GETDLCLKLLHVMESRNCTLNFQTYVMLA 806
>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 137/345 (39%), Gaps = 61/345 (17%)
Query: 136 EQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
++A S FN + P V Y +LLN+Y ++ +KA + + M+ L + YN+M
Sbjct: 364 KEALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAM 423
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
++ Y G + ++ EME+ GI + + LL+AC S ID ++ E R
Sbjct: 424 IDAYGSNGLLAEAVEVLREMEQDGIYPNAVSICTLLAACGRCSRKVNIDVVLQAAE-RRH 482
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAV---LRKSEVLMMHNKFSRAYDFVITQYAACGNK 310
+ L+ Y +A Y+ G +KA ++ +RKS+V+ A F + C
Sbjct: 483 IKLNTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKVI------PDAVTFTVLISGCC--- 533
Query: 311 DDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
K E E + D++IP
Sbjct: 534 -----------------------------------KMTKYCEALEFLSEMMDLKIP-MTK 557
Query: 371 DAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA 430
+AY G + +AE++ K ++ G P+V T+ +M Y E KKA LL+
Sbjct: 558 EAY-SSGKITEAESMFNKMKMAGCSPDVVTYTMMLHAY-------NAAEHWKKACALLQE 609
Query: 431 GTRW--KPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISAD 473
+ +P +A + + K D + + KEI +D
Sbjct: 610 MEEYNIQPDTIACSALMRAFNKGGDPSKVLILAEFMREKEIPLSD 654
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 155/379 (40%), Gaps = 55/379 (14%)
Query: 64 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA 123
+D + LL++WV GR + ++IK+ H++ + WM + N+
Sbjct: 83 SDDVEGLLNRWV--GR-FARKNFPLLIKEITQKGSIEHSILVFRWMKNQRNYCARTDIYN 139
Query: 124 IRLDLIAKVQGIEQAASYF------NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQ 177
+ + L A+ +QA F C P+ AL+NA+ + A IM+
Sbjct: 140 MMIRLHARHNWTDQARGLFFEMQKWRCKPD----AETCNALINAHGRSGQWRWAMNIMED 195
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
M + + YN+++N +GN+++ L +M E G+ D T +I+LS A
Sbjct: 196 MLQKAIPPSRSTYNNLINACGSSGNWREALKLCKKMTENGVGPDLVTHNIILS---AYKT 252
Query: 238 GEGIDKIVAMMEADRGVVL--DWTVYATAASGYVKAGLSDKALAVLRK------------ 283
G K ++ E +G + D T K G +KA+ + +
Sbjct: 253 GAQYAKALSYFELMKGTNIRPDTTTLNIIIYCLTKLGQYEKAIGIFKSMREKRAECHPDV 312
Query: 284 ---SEVLMMHN----------KFSR-----------AYDFVITQYAACGNKDDVLRVWKR 319
+ ++ +++ FS +Y+ ++ YA+ G + L V+
Sbjct: 313 VTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNA 372
Query: 320 YKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
K + L+ Y +++S + + A ++FE + L +I N +IDAY GL
Sbjct: 373 IKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGL 432
Query: 379 LHKAETLIYKAQLRGTEPN 397
L +A ++ + + G PN
Sbjct: 433 LAEAVEVLREMEQDGIYPN 451
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 10/127 (7%)
Query: 135 IEQAASYFN------CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
I +A S FN C P+ + Y +L+AY A+ +KA ++Q+M + + TI
Sbjct: 565 ITEAESMFNKMKMAGCSPDVV----TYTMMLHAYNAAEHWKKACALLQEMEEYNIQPDTI 620
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMM 248
+++M + + G+ K+ L M EK I F ++SAC+ D +++ +M
Sbjct: 621 ACSALMRAFNKGGDPSKVLILAEFMREKEIPLSDAIFFEMVSACSLLRDWRTTIELIKLM 680
Query: 249 EADRGVV 255
E+ VV
Sbjct: 681 ESSFSVV 687
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 116/283 (40%), Gaps = 10/283 (3%)
Query: 132 VQG-IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
V+G E A + F + LPS Y ++ + +KA +I +M G I
Sbjct: 389 VEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVI 448
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV-AM 247
YN+++ Y + GN L+ M+ G+ D +T++ L+S + E + M
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC 307
ME G+ + Y GY D ALA+ K V + S+ Y+ +I+ ++
Sbjct: 509 ME--HGISPNHVTYTAIIDGYFNLAKVDDALALFWKM-VESGNLPSSQTYNVMISGFSKT 565
Query: 308 GNKDDVLRVW-KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
+ + K KQ L Y I L + A KIF E E RN ++
Sbjct: 566 NSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTY 625
Query: 367 NHLIDAYCRRGLLHKAE--TLIYKAQLRGTEPNVRTWYLMATG 407
+ LI C+ G AE L+ + G EPNV T+ + G
Sbjct: 626 SSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKG 668
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 108/273 (39%), Gaps = 41/273 (15%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y +L+ + + + A + +M G ++ Y++++N G ++ ++ EM
Sbjct: 239 TYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEM 298
Query: 214 EEKGIDCDKYTFSI-LLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+KGI+ YT++I L+S C A E ++ + M + RG V + + SG + G
Sbjct: 299 VQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKK--RGCVPNIQTFTALISGLSRDG 356
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYI 332
+ A+ + H + Y A N+ L V R+
Sbjct: 357 KFEIAIG--------LYHKMLADGLVPTTVTYNALINQ---LCVEGRF------------ 393
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
E+A IF+ S + N +I +C G + KA + K
Sbjct: 394 ------------ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKA 441
Query: 393 GTEPNVRTWYLMATGYLQN---NQSEKGVEAMK 422
G+ PNV T+ + GY + N + + +E MK
Sbjct: 442 GSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK 474
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 132/296 (44%), Gaps = 24/296 (8%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+VY ++N+ + + A +A ++QM G V ++Y+++++ Y G + S+
Sbjct: 165 PNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSV 224
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD--RGVVLDWTVYATAASG 267
M KG + YT++ L++ E I++ V +++ +G+V D + T SG
Sbjct: 225 FDLMVSKGCTPNVYTYTSLMNGYCKI---ERIEEAVQLLDETLRKGLVPDIVTFTTIISG 281
Query: 268 YVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC--GNKDDVLRVWKR-----Y 320
+AG + LA + + H + + C GN ++ +++
Sbjct: 282 LCRAG---RPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTV 338
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
K NL +Y +I SL K ++ +++F L ++ L+ A C+ GL+
Sbjct: 339 KPNLVIYT----ILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLII 394
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQN---NQSEKGVEAMKKALVLLEAGTR 433
+A L K + G P+ + ++ G+LQ+ + + + VE M +A TR
Sbjct: 395 EAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATR 450
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 40/243 (16%)
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
++++ + + + G+Y+ + L E+E GI+ D ++ SIL I+ +
Sbjct: 63 VEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL------------INCFCHL 110
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC 307
D G+ + S +K GL + L M K D V+ Y
Sbjct: 111 HRVDFGL--------SVLSKILKLGLEPSIVTFTTLLNGLCMEGKM----DQVMMLY--- 155
Query: 308 GNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
DD+L + + N+ YN +I+SL K A ++ E ++ +
Sbjct: 156 ---DDML--VRGLQPNVYTYN----VIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYS 206
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV----EAMKK 423
LID YC RG + +A ++ +G PNV T+ + GY + + E+ V E ++K
Sbjct: 207 TLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRK 266
Query: 424 ALV 426
LV
Sbjct: 267 GLV 269
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 150/359 (41%), Gaps = 45/359 (12%)
Query: 109 MTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAK 166
+++K NFV+ LD + K+ ++ + + +VY+ L+N +
Sbjct: 195 LSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEG 254
Query: 167 SAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFS 226
+ A+ + ++ R L + +N+++N Y + GN L H ME+ D +T+S
Sbjct: 255 NICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYS 314
Query: 227 ILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD-------KALA 279
L++A + +G ++ M +RG++ + ++ T G+ + G D K L+
Sbjct: 315 ALINALCKENKMDGAHRLFYEM-CERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLS 373
Query: 280 VLRKSEVLMMH---NKFSRAYDFV------------------------ITQYAACGNKDD 312
+ ++++ + N F + D V I + G+ D
Sbjct: 374 KGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDT 433
Query: 313 VLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
L + K QN +++ G+ +I + K + AE+ E + D ++D
Sbjct: 434 ALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMD 493
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA 430
A+C++G L+ + Q G PNV T+ ++ G + Q MK A +LL+A
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQ-------MKNADMLLDA 545
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 130/319 (40%), Gaps = 45/319 (14%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PS+ Y LLN + E AE +++ M + + + YN+M+ Y Q G +K
Sbjct: 165 PSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEK 224
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+ME + + DK T+ L+ AC A D + + M+ + G+ + Y+ G
Sbjct: 225 FRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMD-ENGLEIPPHAYSLVIGGLC 283
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRA-YDFVITQYAACGNKDDVLRVWKRYKQ------ 322
K G + AV K ++ K + A Y +I A CGN + + +++R K+
Sbjct: 284 KEGKCVEGYAVFEK--MIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPD 341
Query: 323 ------------------------------NLKVYNRGYICVISSLLKFDGMESAEKIFE 352
+ V Y +I L K + AEK+FE
Sbjct: 342 VVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFE 401
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
E + D N LIDA + G +A + + G + V T+ +M G + +
Sbjct: 402 EMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREH 461
Query: 413 QSEKGVEAMKKALVLLEAG 431
++E EA+K ++++ G
Sbjct: 462 KNE---EALKMWDMMIDKG 477
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 151/346 (43%), Gaps = 29/346 (8%)
Query: 103 LQISMWMTKKSNFVLT-PADVAIRLDLIAKVQGIEQAASYFNCVPEKLKL---PSV---- 154
L+ S W+ + + +L P D+ RLDL I+ + ++ + V + ++L P +
Sbjct: 24 LKPSPWVHQIMSLLLDGPVDMESRLDLFCNKFLIKLSPNFVSFVLKSMELQKRPDLALKF 83
Query: 155 ----------------YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYY 198
Y++ ++ A + + + + R G + NS++ +
Sbjct: 84 FTWAGKQKKYTHNLQCYVSSIDVLAINGDLDNVKSVFCKFRGMGFLMNVSAANSLIKSFG 143
Query: 199 QTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDW 258
G ++L + M+E G++ +T++ LL+ + E ++++ +ME + + D
Sbjct: 144 SLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGK-IGPDV 202
Query: 259 TVYATAASGYVKAGLSDKALAVLRKSEVL-MMHNKFSRAYDFVITQYAACGNKDDVLRVW 317
Y T GY + G + KA R E+ + +K + Y +I A G+ D L ++
Sbjct: 203 VTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKIT--YMTLIQACYAEGDFDLCLSLY 260
Query: 318 KRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRR 376
+N L++ Y VI L K +FE+ + ++ I LID+ +
Sbjct: 261 HEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKC 320
Query: 377 GLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
G + +A L + + G EP+V T+ ++ ++ + ++ +E ++
Sbjct: 321 GNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLE 366
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y +L++ A +AE + ++M +G + YN++++ + G + + M
Sbjct: 379 LYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRM 438
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E++G D YT++I+++ E K+ MM D+G+ + + G +G
Sbjct: 439 EDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMM-IDKGITPTAAAFRALSIGLCLSGK 497
Query: 274 SDKALAVL 281
+A +L
Sbjct: 498 VARACKLL 505
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 117/295 (39%), Gaps = 51/295 (17%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ A +KA ++ +M DRG+ T+ +NS+M+ + G +++ SL+ M
Sbjct: 13 YNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMA 72
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAG 272
E+ T++ L+S + +D+ +++ G V D Y+ A G K G
Sbjct: 73 ERNCRPSCCTYNTLISGLCKQ---QNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRG 129
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYI 332
D+A ++++ M N + NL YN
Sbjct: 130 RIDEAFELVKE----MSGNGCT---------------------------PNLVTYNT--- 155
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I L K E A ++ E S D+ ++D C+ G L KA ++ R
Sbjct: 156 -LIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKR 214
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGY 447
G P+V T+ + G + + ++ K+ + SK+C A L Y
Sbjct: 215 GCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV-----------SKDCTADALAY 258
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 130/309 (42%), Gaps = 26/309 (8%)
Query: 124 IRLDLIAKVQGIEQAASYF------NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQ 177
I +D + K +++A + CVP+ + Y +++ A ++A ++ Q
Sbjct: 327 IVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVS----YNIIIDGLFKASKPKEARQVLDQ 382
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
M G+ + YN++M + + + ++ M + G+D D T++ L+S + +
Sbjct: 383 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 442
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH------N 291
+++ M + VV T Y T K G L+++ +LM H
Sbjct: 443 LGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEG-------CLKQALLLMDHMTGHGVE 495
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
+ Y+ I + G D+ + + + Y VI L K + ++ A K+
Sbjct: 496 ANTVTYNIFIDRLCKEGRLDEASSLLS--EMDTLRDEVSYTTVIIGLCKAEQLDRASKLA 553
Query: 352 EEWES-RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
E + + LC N LIDA+ + L +A TL+ RG P+V T+ ++ T +
Sbjct: 554 REMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCK 613
Query: 411 NNQSEKGVE 419
++ +K E
Sbjct: 614 LDKVDKAWE 622
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/361 (20%), Positives = 142/361 (39%), Gaps = 60/361 (16%)
Query: 117 LTPADVAIR--LDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAE 172
+TP V +D + K E+A S + E+ PS Y L++ ++ ++A+
Sbjct: 41 VTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAK 100
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
++ + G V + Y+ + + + G + L+ EM G + T++ L+
Sbjct: 101 TLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGL 160
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
AS E +++ + G V D Y G K G DKAL M+
Sbjct: 161 CKASKTEKAYELLETL-VSSGFVPDVVTYTIIVDGLCKEGRLDKALK--------MVEGM 211
Query: 293 FSRAYDFVITQYAA-----C--GNKDDVLRVWK-------------------------RY 320
R + Y A C G D+ ++K R
Sbjct: 212 LKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRT 271
Query: 321 KQNLKVYN--RG--YICVISSLLKFDG------MESAEKIFEEWESRNLCHDIRIPNHLI 370
K+ KV + RG YI V ++L+ DG ++ +FE+ R +I+ N ++
Sbjct: 272 KEAQKVVDGIRGTPYIDVYNALM--DGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVM 329
Query: 371 DAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA 430
D C+ G + +A + G P+V ++ ++ G + ++ ++ + + + +++A
Sbjct: 330 DGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQ---MIQA 386
Query: 431 G 431
G
Sbjct: 387 G 387
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 116/295 (39%), Gaps = 46/295 (15%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+LDQ ++ G P D ++ +F +RF A+ I M K + P +V
Sbjct: 379 VLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG---VDPDNVTYN---- 431
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
+ G+ Q L +AY E++ + +R+ +V
Sbjct: 432 TLISGLSQTNR-----------------LGDAY---------ELMHEMLRNGCVVSACTT 465
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
YN++++ + G K+ LM M G++ + T++I + + +++ M+
Sbjct: 466 YNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD 525
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN 309
R D Y T G KA D+A + R+ + S ++ +I +
Sbjct: 526 TLR----DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKR 581
Query: 310 KDDVLRVWKRYKQ-----NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
D+ L + + Q ++ YN VI+ L K D ++ A ++F+E R +
Sbjct: 582 LDEALTLLELMVQRGCSPSVITYNM----VITCLCKLDKVDKAWELFDEMAVRGI 632
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 115/261 (44%), Gaps = 13/261 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y ++++A +SA +A +I++QM G I +N+++ G+ +K + + E
Sbjct: 1085 IYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA 1144
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ ++ ++ +++ L+ C D +V MM RG D + G V AG
Sbjct: 1145 IRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMM--GRGHTPDVVTFGALIHGLVVAG 1202
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-----YKQNLKVY 327
+AL V K + F + + C K +L K ++N++
Sbjct: 1203 KVSEALIVREK---MTERQVFPDVNIYNVLISGLC--KKRMLPAAKNILEEMLEKNVQPD 1257
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y +I ++ + + A KIFE E + +C DI N +I YC+ G++ +A +
Sbjct: 1258 EFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMS 1317
Query: 388 KAQLRGTEPNVRTWYLMATGY 408
+ G P+ T+ + +GY
Sbjct: 1318 NMRKVGCIPDEFTYTTVISGY 1338
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 149/377 (39%), Gaps = 49/377 (12%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
LL + + G D+ +I + + S AL + MT++ F DV I LI
Sbjct: 1175 LLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVF----PDVNIYNVLI 1230
Query: 130 A---KVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
+ K + + A + + EK P VY L++ + +++ A I + M +G+
Sbjct: 1231 SGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVC 1290
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI 244
+ N+M+ Y Q G + M M + G D++T++ ++S A + G +
Sbjct: 1291 PDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRW 1350
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
+ M R + Y++ +GY K G +D A E L + + V+T
Sbjct: 1351 LCDM-IKRKCKPNVVTYSSLINGYCKTGDTDSA-------EGLFANMQAEALSPNVVTYT 1402
Query: 305 AACGN---KDDVLRVWKRYKQNLKVY---------------NRGYICVISSLL----KFD 342
G+ KD VLR ++ L + CVI+S+ +
Sbjct: 1403 ILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVH 1462
Query: 343 GMESAEKIFEEWESRNLCHDIRIP-----NHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
G ++ +F + L DI P N +I + CR +L +A + +G PN
Sbjct: 1463 GKDALLVVF-----KKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPN 1517
Query: 398 VRTWYLMATGYLQNNQS 414
T+ + G+ +S
Sbjct: 1518 PITFLSLLYGFCSVGKS 1534
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 115/260 (44%), Gaps = 5/260 (1%)
Query: 168 AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSI 227
++A + +M +G+ + Y+ +++ + G + L++EM + I+ D YT++I
Sbjct: 214 VDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTI 273
Query: 228 LLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV 286
L+ A C E + + M++A V LD VY+T GY + A V +
Sbjct: 274 LVDALCKEGKVKEAENVLAVMVKA--CVNLDVVVYSTLMDGYCLVNEVNNAKRVFY-TMT 330
Query: 287 LMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGME 345
M Y +I D+ L +++ +++N+ Y +I L K +
Sbjct: 331 QMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRIS 390
Query: 346 SAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
+F+E R D+ N+LIDA C+ G L +A L K + + PNV T+ ++
Sbjct: 391 YVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILL 450
Query: 406 TGYLQNNQSEKGVEAMKKAL 425
G + + + +E + L
Sbjct: 451 DGLCKVGRLKNALEFFQDLL 470
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/280 (18%), Positives = 122/280 (43%), Gaps = 24/280 (8%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++A ++AE ++ M + + Y+++M+ Y + + M
Sbjct: 271 YTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMT 330
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAG 272
+ G+ D + +SI+++ + +D+ + + E + +V D Y + K+G
Sbjct: 331 QMGVTPDVHCYSIMINGLCKI---KRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSG 387
Query: 273 -------LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNL 324
L D+ L + +V+ Y+ +I G+ D + ++ + K Q +
Sbjct: 388 RISYVWDLFDEMLDRGQPPDVI--------TYNNLIDALCKNGHLDRAIALFNKMKDQAI 439
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
+ + ++ L K +++A + F++ ++ C ++R +I+ C+ GLL +A
Sbjct: 440 RPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALA 499
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYL---QNNQSEKGVEAM 421
L + + G + T+ +M + +N+++EK V M
Sbjct: 500 LQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREM 539
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 152/392 (38%), Gaps = 58/392 (14%)
Query: 130 AKVQGIEQAASYFNCVPEK--LKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
K+ + A F +P++ L+ Y L++ + ++A + QM++ G
Sbjct: 236 CKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDV 295
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS-ACAAASDGEGIDKIVA 246
Y ++ + + G + EM E GI+ + YT+++L+ C EG++ +
Sbjct: 296 PTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLST 355
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQ 303
M+E +G+V + GY K G+ + A+ VL M NK SR Y+ +I
Sbjct: 356 MLE--KGLVSSVVPFNALIDGYCKRGMMEDAICVLDS----MKLNKVCPNSRTYNELICG 409
Query: 304 YAACGNKDDVLRVWKRYKQ-----NLKVYN------------------------------ 328
+ + D + + + + NL YN
Sbjct: 410 FCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPD 469
Query: 329 -RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
R + I L K +E A ++FE + ++ + + LID YC+ A L
Sbjct: 470 QRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFK 529
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGY 447
+ G PN T+ ++ G + + E + +LV + KP+ +
Sbjct: 530 RMLFEGCFPNSITFNVLLDGLRKEGKVEDAM-----SLVDVMGKFDAKPTVHTYTILIEE 584
Query: 448 YKKERDIEGADYFIKLLTGKEIISADLQDRLL 479
+E D + A+ F+ ++IS+ Q ++
Sbjct: 585 ILRESDFDRANMFL-----DQMISSGCQPNVV 611
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 110/256 (42%), Gaps = 13/256 (5%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILLSAC 232
+ + M + G+ I +N+M+N + + GN + + + G CD +T+ S++L C
Sbjct: 177 LFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYC 236
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
G+ K+ +M + G + + Y G+ + G D+AL + + +
Sbjct: 237 KIHELGDAY-KVFEIMPQE-GCLRNEVSYTNLIHGFCEVGKIDEALELFFQ---MKEDGC 291
Query: 293 FS--RAYDFVITQYAACGNKDDVLRVWKRYKQN---LKVYNRGYICVISSLLKFDGMESA 347
F Y ++ + G + + L+ ++ +N VY Y +I K M+
Sbjct: 292 FPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYT--YTVLIDYFCKVGKMDEG 349
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
++ + L + N LID YC+RG++ A ++ +L PN RT+ + G
Sbjct: 350 MEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICG 409
Query: 408 YLQNNQSEKGVEAMKK 423
+ + ++ + + K
Sbjct: 410 FCRKKSMDRAMALLNK 425
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 103/262 (39%), Gaps = 19/262 (7%)
Query: 144 CVPEKLKLPSV------YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVY 197
CV + +KL V Y L+ + KS ++A ++ +M + L + YN++++
Sbjct: 386 CVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGL 445
Query: 198 YQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLD 257
+ L H M + G D+ TF + E ++ ++ +
Sbjct: 446 CKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANE 505
Query: 258 WTVYATAASGYVKA-GLSDKALAVLRKSEVLMMHNKF--SRAYDFVITQYAACGNKDDVL 314
+ +Y GY KA SD L R ++ F S ++ ++ G +D +
Sbjct: 506 F-LYTALIDGYCKAEKFSDAHLLFKR----MLFEGCFPNSITFNVLLDGLRKEGKVEDAM 560
Query: 315 R---VWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
V ++ V+ Y +I +L+ + A ++ S ++ I
Sbjct: 561 SLVDVMGKFDAKPTVHT--YTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIK 618
Query: 372 AYCRRGLLHKAETLIYKAQLRG 393
AYCR+G L +AE ++ K + G
Sbjct: 619 AYCRQGRLLEAEEMVVKIKEEG 640
>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 632
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 131/307 (42%), Gaps = 40/307 (13%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
++N + ++A +I Q + + G Y +++N +K + S++ +EEK
Sbjct: 78 VMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQ 137
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
+ D F+ L++A A + + E K+V M+ + G+ Y T GY AG D++
Sbjct: 138 MKPDSIFFNALINAFAESGNMEDAKKVVQKMK-ESGLKPSACTYNTLIKGYGIAGKPDES 196
Query: 278 LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISS 337
+ +L D++ K NLK YN +I +
Sbjct: 197 MKLL------------------------------DLMSTEGNVKPNLKTYNM----LIRA 222
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
L K + + A + + + + D+ N + AY + G +AE +I + Q +PN
Sbjct: 223 LCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPN 282
Query: 398 VRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGA 457
RT ++ +GY + + + EA++ + + G +P+ L + + + D +G
Sbjct: 283 ERTCTIIISGYCREGKVQ---EALRFVYRMKDLG--MQPNLIVLNSLVNGFVDMMDRDGV 337
Query: 458 DYFIKLL 464
D +KL+
Sbjct: 338 DEVLKLM 344
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 13/178 (7%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
+++ Y ++A + +M+D G+ I NS++N + + +D ++ MEE
Sbjct: 289 IISGYCREGKVQEALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQ 348
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
I D T+S +++A + A E +I M GV D Y+ A GYV+A +KA
Sbjct: 349 IRPDVITYSTIMNAWSQAGFLEKCKEIYNNM-LKSGVKPDAHAYSILAKGYVRAQEMEKA 407
Query: 278 ---LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVY 327
L V+ KS V H + VI+ + + G D+ +RV+ + + NLK +
Sbjct: 408 EEMLTVMTKSGV---HPNVV-IFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTF 461
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V +L+N + + + +++ M + + I Y+++MN + Q G +K + + M
Sbjct: 320 VLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNNM 379
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ G+ D + +SIL A + E ++++ +M GV + ++ T SG+ G
Sbjct: 380 LKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVM-TKSGVHPNVVIFTTVISGWCSVGR 438
Query: 274 SDKALAVLRK 283
D A+ V K
Sbjct: 439 MDNAMRVFDK 448
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/265 (18%), Positives = 108/265 (40%), Gaps = 5/265 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+ A ++ +A ++ +M G+ + +N++ Y Q G + ++++ EM
Sbjct: 215 TYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEAMILEM 274
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ + ++ T +I++S C E + + M D G+ + V + +G+V
Sbjct: 275 QRNSLKPNERTCTIIISGYCREGKVQEALRFVYRM--KDLGMQPNLIVLNSLVNGFVDMM 332
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGY 331
D VL+ E + Y ++ ++ G + ++ K +K Y
Sbjct: 333 DRDGVDEVLKLMEEFQIRPDVI-TYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAHAY 391
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+ ++ ME AE++ + ++ I +I +C G + A + K
Sbjct: 392 SILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMGE 451
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEK 416
G PN++T+ + GY + Q K
Sbjct: 452 FGVSPNLKTFETLIWGYAEAKQPWK 476
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 151/343 (44%), Gaps = 21/343 (6%)
Query: 82 DMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPA--DVAIRLDLIAKVQGIEQAA 139
D + RI + F R A + M K + P + +D + K I++A
Sbjct: 286 DAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSG---IDPGVHTFTVLIDALVKSGNIDEAC 342
Query: 140 SYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVY 197
+FN + P+V Y L+N A A E+A + +M++ I YN++++
Sbjct: 343 KFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGL 402
Query: 198 YQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLD 257
+ G L EM+++G+ + T++I++S A ++ ++ ++G V D
Sbjct: 403 GKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLK-EQGAVPD 461
Query: 258 WTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW 317
Y T K G DK LA++++ + + +I++ + G++ +
Sbjct: 462 VFTYNTLIDVLGKGGQMDKVLAIIKE--------MVEKGGECIISRDSNAGHEGTIEGAD 513
Query: 318 KRYK-QNLKVYNRG---YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAY 373
+ + +L + G Y ++S+ + ++ A K+ E + + L+D
Sbjct: 514 RTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGL 573
Query: 374 CRRGLLHKAETLIYKAQLRGTEPNVRTW-YLMATGYLQNNQSE 415
+ G L +A +L+ + + +G EP+V T+ LMA+ Y ++ + E
Sbjct: 574 GKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEE 616
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 143/349 (40%), Gaps = 18/349 (5%)
Query: 62 DPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTP-- 119
D + + L D+ V +G D+ ++I AL + M ++ + P
Sbjct: 612 DQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEG---MEPLL 668
Query: 120 ADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQ 177
+ L + K + I+ A FN + E +P VY ++N + ++A ++
Sbjct: 669 GNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDS 728
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
M+++ ++ Y S+++ ++G ++ ++ +M E+G + D ++ L+
Sbjct: 729 MKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGK 788
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY 297
I M R V D Y++ K G ++A S + Y
Sbjct: 789 LSHALIIFRAMAKKR-CVPDVVTYSSLIDSLGKEGRVEEAYYFFENS-ISKGCTPNVGVY 846
Query: 298 DFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNRGYICVISSLLKFDGMESAEKIFE 352
+I + G D L +++ ++ N+ YN ++S L K + AEK+ E
Sbjct: 847 SSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNN----LLSGLAKAGRLNVAEKLLE 902
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
E E D+ N LID + G++ +AE+ + + +G P+V T+
Sbjct: 903 EMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITF 951
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 126/275 (45%), Gaps = 6/275 (2%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y ++N + ++A + +M++ G+ +Y ++++ + + +E
Sbjct: 634 STYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNE 693
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
++E + D + ++I+++ ++ + K+V M+ ++ ++ D Y + G K+G
Sbjct: 694 LQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMK-NQNILPDLFTYTSLLDGLGKSG 752
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GY 331
++A + K H AY ++ G L +++ + V + Y
Sbjct: 753 RLEEAFNMFTKM-TEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTY 811
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I SL K +E A FE S+ ++ + + LID++ ++G++ +A L + Q
Sbjct: 812 SSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQR 871
Query: 392 RGTEPNVRTWYLMATGYLQN---NQSEKGVEAMKK 423
R PN+ T+ + +G + N +EK +E M+K
Sbjct: 872 RQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEK 906
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 118/284 (41%), Gaps = 9/284 (3%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
LD + K +E+A + F + E+ P V Y +L++ A II + M +
Sbjct: 745 LDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRC 804
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
V + Y+S+++ + G ++ KG + +S L+ + +D+
Sbjct: 805 VPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGM---VDR 861
Query: 244 IVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVI 301
+ + E R + Y SG KAG + A +L + E + Y+ +I
Sbjct: 862 ALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLV-TYNILI 920
Query: 302 TQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLC 360
G D+ +KR K+ V + + +I SL K D + A ++F+ E
Sbjct: 921 DGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYN 980
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
+ N LID R G +H+A + ++ +++G P+ T +M
Sbjct: 981 PSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 138/324 (42%), Gaps = 20/324 (6%)
Query: 95 LYKRFSHALQISMW--MTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLP 152
YKR +S++ M +K V + ++ ++ + K ++QA F + E+ P
Sbjct: 608 FYKRDQEEESLSLFDEMVRKG-CVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEP 666
Query: 153 SV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLM 210
+ Y LL++ + + A I ++++ LV T YN M+N ++ + L+
Sbjct: 667 LLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLV 726
Query: 211 HEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
M+ + I D +T++ LL + E + M + G D Y + K
Sbjct: 727 DSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKM-TEEGHEPDVVAYTSLMDVLGK 785
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA---ACGNKDDVLRVWKRYKQNLKVY 327
G AL + R M K R V+T + + G + V + ++ ++
Sbjct: 786 GGKLSHALIIFRA-----MAKK--RCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKG 838
Query: 328 NRGYICVISSLLKFDG----MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
+ V SSL+ G ++ A ++FEE + R +I N+L+ + G L+ AE
Sbjct: 839 CTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAE 898
Query: 384 TLIYKAQLRGTEPNVRTWYLMATG 407
L+ + + G P++ T+ ++ G
Sbjct: 899 KLLEEMEKVGCVPDLVTYNILIDG 922
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 120/304 (39%), Gaps = 14/304 (4%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
+LL + + A I QM+ G T YN ++ + + G Y + ++ +
Sbjct: 222 SLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQF 281
Query: 217 GIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
I D TF I + + + + I M+++ G+ + VK+G D
Sbjct: 282 RIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKS--GIDPGVHTFTVLIDALVKSGNID 339
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICV 334
+A + L Y ++ A G ++ V+ K+N + Y +
Sbjct: 340 EACKFFNGMKNLRCSPNVV-TYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTL 398
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I L K + A +F+E + R L ++R N +I + G +A L + + +G
Sbjct: 399 IDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGA 458
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDI 454
P+V T+ + + Q +K + +K+ ++E G EC+ + E I
Sbjct: 459 VPDVFTYNTLIDVLGKGGQMDKVLAIIKE---MVEKG------GECIISRDSNAGHEGTI 509
Query: 455 EGAD 458
EGAD
Sbjct: 510 EGAD 513
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I +D + K+ +++A SYF + EK +P V + +L+ + +A + M +
Sbjct: 918 ILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEE 977
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
G + YN ++++ + G + + HEM+ KG D T I+
Sbjct: 978 GYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024
>gi|301111514|ref|XP_002904836.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095166|gb|EEY53218.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 633
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 91/170 (53%), Gaps = 10/170 (5%)
Query: 82 DMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASY 141
+ME +RI K R + ++ + + F+L PA +A + A V +++ +
Sbjct: 107 EMECVRIYQKA----GRNQEVVALAEKLMSQDVFLLNPA-LASAIQACAAVGDMDKGFHF 161
Query: 142 FNCVPEKLKLP--SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQ 199
F+ ++ +P SVY ALL ++ + ++ QM+D G+ I ++++M+ Y +
Sbjct: 162 FDVAVKRGSIPNLSVYSALLAVAGATGDPKRVQTVLTQMQDAGVEMNDITFHNLMSAYAR 221
Query: 200 TGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
G+ + +L +M+++GI D++T++IL+ A A + D EG + A+ME
Sbjct: 222 GGHVTEALALFDKMQKQGIPADEHTYAILMDAHAESGDFEGAN---ALME 268
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 133/307 (43%), Gaps = 7/307 (2%)
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRD 180
+I +D + KV E+A FN + ++ P+V + L++ KA+ +++ M
Sbjct: 241 SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQ 300
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGE 239
G+V Y S++ + G+ L M KG + D ++++L++ C E
Sbjct: 301 IGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEE 360
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
+ M+ G+ D AG D A + R + M F
Sbjct: 361 AMKLFNEMLHV--GMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIF 418
Query: 300 VITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
+ G + ++++ + N+K+ + C+I L K +E+A ++FE+
Sbjct: 419 -LDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEG 477
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
+ D + +I +C++G + KA L K + G P++ T+ ++ G+ ++N+ EK V
Sbjct: 478 IQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVV 537
Query: 419 EAMKKAL 425
+ + + +
Sbjct: 538 QLLHRMI 544
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 99/236 (41%), Gaps = 15/236 (6%)
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI 241
+++ +N ++ + +Y ++ SL +M G+ D T +IL++ C EG+
Sbjct: 87 MMRSIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGL 146
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGY-VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
+ +M RG + D + T G V+ + + +R ++ N + Y +
Sbjct: 147 AAMAGIMR--RGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVT--YGTL 202
Query: 301 ITQYAACGNKDDVLRVWKR--------YKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
I A GN + L+ W + Y N + Y +I L K E A +F
Sbjct: 203 IKGLCALGNINIALK-WHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFN 261
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
E + + ++ + LID C+ G + KA+ L+ G PN+ T+ + G+
Sbjct: 262 EMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGF 317
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K +E A F + E+ P Y ++++ + +KA I+ Q+M + G
Sbjct: 454 IDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGC 513
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
I Y+ +M +Y++ +K+ L+H M EK + D ++I+
Sbjct: 514 SPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIV 558
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 118/267 (44%), Gaps = 40/267 (14%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVK-KTIDYNSMMNVYYQTGNYKKLDSLMHEMEE 215
AL++A A +AE + + G +K +T YN+++ Y + G+ K + ++ EM +
Sbjct: 268 ALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQ 327
Query: 216 KGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
G+ D+ T+S+L+ A A E ++ MEAD GV V++ +G+ G
Sbjct: 328 CGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD-GVKPSSYVFSRILAGFRDRGDWQ 386
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-YICV 334
KA AVLR+ + A G + D R+ N+ + G Y C+
Sbjct: 387 KAFAVLREMQ--------------------ASGVRPD------RHFYNVMIDTFGKYNCL 420
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
++ FD M EE E D+ N LIDA+C+ G +A L + +
Sbjct: 421 GHAMDAFDRMRE-----EEIEP-----DVVTWNTLIDAHCKGGRHDRAMELFEEMRESNC 470
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAM 421
P T+ +M L + +GVEAM
Sbjct: 471 PPGTTTYNIM-INLLGEQERWEGVEAM 496
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 113/272 (41%), Gaps = 9/272 (3%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ALL Y S + AE ++ +M G+ Y+ +++ Y + G ++ L+ EME
Sbjct: 302 YNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEME 361
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK---A 271
G+ Y FS +L+ D + ++ M+A GV D Y + K
Sbjct: 362 ADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQAS-GVRPDRHFYNVMIDTFGKYNCL 420
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRG 330
G + A +R+ E+ ++ +I + G D + +++ ++ N
Sbjct: 421 GHAMDAFDRMREEEI----EPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTT 476
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I+ L + + E E + E + + L +I L+D Y R G +A I +
Sbjct: 477 YNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMK 536
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
G +P+ ++ + Y Q ++ + +K
Sbjct: 537 ADGLKPSPTMYHALVNAYAQRGLADHALNVVK 568
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
NC P + Y ++N + E E ++ +M+++GLV I Y ++++VY ++G
Sbjct: 469 NCPPGT----TTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGR 524
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
YK+ + M+ G+ + L++A A + +V M+AD
Sbjct: 525 YKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKAD 573
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/169 (18%), Positives = 75/169 (44%), Gaps = 3/169 (1%)
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV 316
D +++ S + +A L D AL +L ++ + + + S A +I+ + G + +
Sbjct: 227 DAPLFSDLISAFARAALPDAALELLASAQAIGLTPR-SNAVTALISALGSAGRVAEAEAL 285
Query: 317 WKRY--KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
+ + +K R Y ++ ++ +++AE++ +E + D + L+DAY
Sbjct: 286 FLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYT 345
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
R G A L+ + + G +P+ + + G+ +K +++
Sbjct: 346 RAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLRE 394
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P++Y AL+NAYA A+ A +++ M+ GL + NS++N + + + S++
Sbjct: 544 PTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQ 603
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
M+E G+ D T++ L+ A E DK+ + E
Sbjct: 604 FMKENGLRPDVITYTTLMKALIRV---EQFDKVPVIYE 638
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 115/261 (44%), Gaps = 13/261 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y ++++A +SA +A +I++QM G I +N+++ G+ +K + + E
Sbjct: 1254 IYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA 1313
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ ++ ++ +++ L+ C D +V MM RG D + G V AG
Sbjct: 1314 IRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMM--GRGHTPDVVTFGALIHGLVVAG 1371
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-----YKQNLKVY 327
+AL V K + F + + C K +L K ++N++
Sbjct: 1372 KVSEALIVREK---MTERQVFPDVNIYNVLISGLC--KKRMLPAAKNILEEMLEKNVQPD 1426
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y +I ++ + + A KIFE E + +C DI N +I YC+ G++ +A +
Sbjct: 1427 EFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMS 1486
Query: 388 KAQLRGTEPNVRTWYLMATGY 408
+ G P+ T+ + +GY
Sbjct: 1487 NMRKVGCIPDEFTYTTVISGY 1507
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 149/377 (39%), Gaps = 49/377 (12%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
LL + + G D+ +I + + S AL + MT++ F DV I LI
Sbjct: 1344 LLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVF----PDVNIYNVLI 1399
Query: 130 A---KVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
+ K + + A + + EK P VY L++ + +++ A I + M +G+
Sbjct: 1400 SGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGIC 1459
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI 244
+ N+M+ Y Q G + M M + G D++T++ ++S A + G +
Sbjct: 1460 PDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRW 1519
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
+ M R + Y++ +GY K G +D A E L + + V+T
Sbjct: 1520 LCDM-IKRKCKPNVVTYSSLINGYCKTGDTDFA-------EGLFANMQAEALSPNVVTYT 1571
Query: 305 AACGN---KDDVLRVWKRYKQNLKVY---------------NRGYICVISSLL----KFD 342
G+ KD VLR ++ L + CVI+S+ +
Sbjct: 1572 ILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVH 1631
Query: 343 GMESAEKIFEEWESRNLCHDIRIP-----NHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
G ++ +F + L DI P N +I + CR +L +A + +G PN
Sbjct: 1632 GKDALLVVF-----KKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPN 1686
Query: 398 VRTWYLMATGYLQNNQS 414
T+ + G+ +S
Sbjct: 1687 PITFLSLLYGFCSVGKS 1703
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 113/256 (44%), Gaps = 3/256 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ++ EKA ++ ++M G + + YN+++N Y GN L+ M+
Sbjct: 453 YNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK 512
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
E G + D++T++ L+S + E M + G+ + Y T G+ K G
Sbjct: 513 ENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM-VECGLNPNPVSYTTLIDGHSKDGKV 571
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-KRYKQNLKVYNRGYIC 333
D AL++L + E M N +Y+ VI + + ++ K +Q L Y
Sbjct: 572 DIALSLLERMEE-MGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTT 630
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+I L + + A KIF + E R ++ + LI C+ G +AE L+ + + +G
Sbjct: 631 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG 690
Query: 394 TEPNVRTWYLMATGYL 409
P+ T+ + G++
Sbjct: 691 LAPDEVTFTSLIDGFV 706
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 115/261 (44%), Gaps = 15/261 (5%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +L+ + ++ + A + +M G ++ Y++++N G + ++ EM
Sbjct: 278 YTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI 337
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
EKGI+ YT+++ ++A A E ++VA M+ RG + Y SG + G
Sbjct: 338 EKGIEPTVYTYTLPITALCAIEHEEEAIELVARMK-KRGCRPNVQTYTALISGLSRLGKL 396
Query: 275 DKALAVLRK--SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-----QNLKVY 327
+ A+ + K E L+ + + Y+ +I + G L+++ + N + Y
Sbjct: 397 EVAIGLYHKMLKEGLVPN---TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTY 453
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
N +I L +E A +FE+ + N LI+ Y +G ++ A L+
Sbjct: 454 NE----IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLD 509
Query: 388 KAQLRGTEPNVRTWYLMATGY 408
+ G EP+ T+ + +G+
Sbjct: 510 LMKENGCEPDEWTYNELVSGF 530
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 155/376 (41%), Gaps = 46/376 (12%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D + LL++ E G ++E +I RFS A +I M ++ L P +
Sbjct: 572 DIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQG---LLPNVITY 628
Query: 125 R--LDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRD 180
+D + + + A F+ + ++ LP++Y +L+ A++AEI++++M
Sbjct: 629 TTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMER 688
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL----------- 229
+GL + + S+++ + G L+ M + G + T+S+LL
Sbjct: 689 KGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLE 748
Query: 230 -------------SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
S + E + ++A M ++ G Y+T SG + G +
Sbjct: 749 EKVAVQHEAVYSFSPHEKDVNFEIVSNLLARM-SEIGCEPTLDTYSTLVSGLCRKGRFYE 807
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN--KDDVLRVW-----KRYKQNLKVYNR 329
A +++ + Y +I A C N D L+++ K ++ +L +Y R
Sbjct: 808 AEQLVKDMKERGFCPDREIYYSLLI---AHCKNLEVDHALKIFHSIEAKGFQLHLSIY-R 863
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
IC +L K +E A+ +F+ + D + L+D + G L L++
Sbjct: 864 ALIC---ALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM 920
Query: 390 QLRGTEPNVRTWYLMA 405
+ + PN++T+ ++
Sbjct: 921 ESKNFTPNIQTYVILG 936
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 123/303 (40%), Gaps = 12/303 (3%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+AK + +E A + + + PS+ + L+N + +AE+I+ Q+ L
Sbjct: 215 LAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPD 274
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIV 245
Y S++ + + N + M ++G D + T+S L++ C E +D +
Sbjct: 275 VFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLE 334
Query: 246 AMMEAD-RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
M+E V +T+ TA + + +A ++K + Y +I+
Sbjct: 335 EMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGC----RPNVQTYTALISGL 390
Query: 305 AACGNKDDVLRVW-KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
+ G + + ++ K K+ L Y +I+ L +A KIF E +
Sbjct: 391 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 450
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN---NQSEKGVEA 420
+ N +I C G + KA L K G P V T+ + GYL N + + ++
Sbjct: 451 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 510
Query: 421 MKK 423
MK+
Sbjct: 511 MKE 513
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 151/348 (43%), Gaps = 14/348 (4%)
Query: 78 GRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQ 137
G +++ I+IK K+F A ++ WM ++ F ++ +AK +
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQG-FSPDVFSYGTLINSLAKNGYMSD 202
Query: 138 AASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKA-EIIMQQMRDRGLVKKTIDYNSMM 194
A F+ +PE+ P V Y L++ + A EI + ++ + YN M+
Sbjct: 203 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 262
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGV 254
N + G + + + H M++ D YT+S L+ + + +G ++ M A+ GV
Sbjct: 263 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM-AENGV 321
Query: 255 VLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKD 311
D VY T +GY++AG ++ L + + +M + R +Y+ +I D
Sbjct: 322 SPDVVVYNTMLNGYLRAGRIEECLELWK-----VMEKEGCRTVVSYNILIRGLFENAKVD 376
Query: 312 DVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+ + +W+ +++ + Y ++ L K + A I EE E+ D + +I
Sbjct: 377 EAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMI 436
Query: 371 DAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
+ CR G L + ++ + G +PN + G+++ ++ E +
Sbjct: 437 NGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDAL 484
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 141/347 (40%), Gaps = 44/347 (12%)
Query: 119 PADVAIR-LDLIAKVQGIEQAASYFNCVPEKLKL-PSV--YIALLNAYACAKSAEKAEII 174
P DVA+ + AK +QA F + E P + Y +LLNA + ++AE
Sbjct: 77 PEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESF 136
Query: 175 MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAA 234
GL YN ++ + + + K L++ M E+G D +++ L++ +
Sbjct: 137 FLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLIN--SL 194
Query: 235 ASDGEGIDKIVAMME-ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF 293
A +G D + E +RGV D Y G+ K G +L SE+ K
Sbjct: 195 AKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKG------DILNASEIWERLLKG 248
Query: 294 SR------AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-----YICVISSLLKFD 342
+Y+ +I CG D+ +W R K+N RG Y +I L
Sbjct: 249 PSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKN----ERGQDLYTYSTLIHGLCGSG 304
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
++ A ++++E + D+ + N +++ Y R G + + L + G V ++
Sbjct: 305 NLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYN 363
Query: 403 LMATGYLQNNQSEKGVEAMKKALVLLEAGTRWK--PSKECLAACLGY 447
++ G +N + + EA + W+ P K+C A + Y
Sbjct: 364 ILIRGLFENAKVD-------------EAISIWELLPEKDCCADSMTY 397
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 107/292 (36%), Gaps = 53/292 (18%)
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
RLD +V G+ + C P P V A++N + A E A M +G
Sbjct: 444 RLD---EVAGVLDQMTKHGCKPN----PHVCNAVINGFVRASKLEDALRFFGNMVSKGCF 496
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI 244
+ YN+++N + + + +L+ EM KG + T+S+L++ G+ +D
Sbjct: 497 PTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLC---QGKKLDMA 553
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
+ + W +AL K +V MHN +I
Sbjct: 554 LNL----------WC----------------QALEKGFKPDV-KMHN-------IIIHGL 579
Query: 305 AACGNKDDVLRVWKRYKQ-----NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
+ G +D L+++ KQ NL +N ++ K E A KI++
Sbjct: 580 CSSGKVEDALQLYSEMKQRKCVPNLVTHNT----LMEGFYKVRDFERASKIWDHILQYGP 635
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
DI N + C + A + A RG P TW ++ L N
Sbjct: 636 QPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDN 687
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYN--RGYICVISSLLKFDGMESAEKIFEEWESR 357
VI YA D L +++R + R Y ++++L++ + + AE F +E+
Sbjct: 84 VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
L +++ N LI CR+ KA+ L+ +G P+V ++ G L N+ ++ G
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSY-----GTLINSLAKNG 198
Query: 418 V--EAMKKALVLLEAGTRWKPSKECLAACL-GYYKKERDIEGADYFIKLLTGKEI 469
+A+K + E G P C + G++KK + ++ + +LL G +
Sbjct: 199 YMSDALKLFDEMPERGV--TPDVACYNILIDGFFKKGDILNASEIWERLLKGPSV 251
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 157/368 (42%), Gaps = 24/368 (6%)
Query: 68 VPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR-- 125
V L+DQ V+ G D+ ++ L KR L +S+ KK ADV I
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNG--LCKRGDIDLALSLL--KKMEKGKIEADVVIYNT 263
Query: 126 -LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRG 182
+D + K + ++ A + F + K P V Y +L++ A ++ M +R
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI 241
+ + ++++++ + + G + + L EM ++ ID D +T+S L++ C E
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFV 300
M+ D + Y+T G+ KA ++ + + R+ S+ ++ N + Y +
Sbjct: 384 HMFELMISKD--CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT--YTTL 439
Query: 301 ITQYAACGNKDDVLRVWKR-----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
I + + D+ V+K+ N+ YN ++ L K + A +FE +
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN----ILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+ DI N +I+ C+ G + L L+G PNV + M +G+ + E
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 416 KGVEAMKK 423
+ +KK
Sbjct: 556 EADSLLKK 563
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 109/254 (42%), Gaps = 20/254 (7%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+++A F + K P+V Y L+ + AK E+ + ++M RGLV T+ Y +
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+++ ++Q + + +M G+ + T++ILL +G+ +V R
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD--GLCKNGKLAKAMVVFEYLQR 496
Query: 253 GVV-LDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKD 311
+ D Y G KAG + + + + AY+ +I+ + G+K+
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI-AYNTMISGFCRKGSKE 555
Query: 312 DVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWES-------------R 357
+ + K+ K++ + N G Y +I + L+ E++ ++ +E S
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 615
Query: 358 NLCHDIRIPNHLID 371
N+ HD R+ +D
Sbjct: 616 NMLHDGRLDKSFLD 629
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 112/275 (40%), Gaps = 49/275 (17%)
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVA 246
+++N +++ + ++ + SL +M+ GI D YT+SI ++ C + + +
Sbjct: 84 VEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAK 143
Query: 247 MMEADRGVVLDWTVYATAASGYVKAG-LSDKALAVLRKSEV---------------LMMH 290
MM+ G D ++ +GY + +SD V + E+ L +H
Sbjct: 144 MMKL--GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 291 NKFSRA------------------YDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVY 327
NK S A Y V+ G+ D L + K+ ++ ++ +Y
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
N +I L K+ M+ A +F E +++ + D+ + LI C G A L+
Sbjct: 262 NT----IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 317
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
R PNV T+ + +++ K VEA K
Sbjct: 318 DMIERKINPNVVTFSALIDAFVKEG---KLVEAEK 349
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 107/278 (38%), Gaps = 54/278 (19%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ L++ A +A ++ QM RG + Y +++N + G+ SL+ +ME
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME 250
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ I+ D +Y T G K
Sbjct: 251 KGKIEA------------------------------------DVVIYNTIIDGLCKYKHM 274
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC----GNKDDVLR-----VWKRYKQNLK 325
D AL + + M NK R F + +C G D R + ++ N+
Sbjct: 275 DDALNLFTE-----MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
++ +I + +K + AEK+++E R++ DI + LI+ +C L +A+ +
Sbjct: 330 TFS----ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ PNV T+ + G+ + + E+G+E ++
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 134/326 (41%), Gaps = 24/326 (7%)
Query: 93 FRLYKRFSHAL-QISMW---------MTKKSNFVLTPADVAIRLDLIAKV--QGIEQAAS 140
F LY F+H L ++ W M K+ P D+ +I + G Q A
Sbjct: 24 FHLYVAFAHCLMRVQKWVALEILVDEMIGKN----CPPDIKFYALVIKEAINTGRFQTAQ 79
Query: 141 YFNCVPEKLKLPS---VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVY 197
++ + L P +Y L+ Y + +A Q++D GL+ + Y ++++
Sbjct: 80 HWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSAC 139
Query: 198 YQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD-RGVVL 256
+ GN K + + EM E GI D+ +SIL+ A E D E G +
Sbjct: 140 RKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHE--DAAATFRELQMSGYLP 197
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV 316
D Y T + K G+ D+A V ++++ + Y +I YA D L V
Sbjct: 198 DSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYT-MIQVYAKARMADQALHV 256
Query: 317 WKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
K K+ L+ GY V+++ ++ + A K+FEE + N +++ Y +
Sbjct: 257 LKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSK 316
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTW 401
G AE L+ K + G NV +
Sbjct: 317 AGFHSAAEELLAKMRQLGFRRNVVAY 342
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 125/316 (39%), Gaps = 12/316 (3%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKL--PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
AKV ++QA F L P ++ ++ YA A+ A++A +++ M++ GL
Sbjct: 209 FAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPN 268
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ Y S++N + + L EM+E + T+ +L+ + A ++++A
Sbjct: 269 ELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLA 328
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
M G + Y+T Y K G +A + + Y+ ++ Y
Sbjct: 329 KMR-QLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQGCKGNLI-VYNTMLDMYGK 386
Query: 307 CGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
G +D R+ K + V + Y +I++ + E ++FE+ + L D +
Sbjct: 387 AGRINDAERLMAELKDSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRIL 446
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK-- 423
+I+ Y + K L+ G +P+ R + Y E E ++K
Sbjct: 447 VAIMINVYGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEIYEDGGMCENAAELLRKIN 506
Query: 424 ALVLLEAGT-----RW 434
L LE T RW
Sbjct: 507 ELGPLEGNTLHKQHRW 522
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 146/342 (42%), Gaps = 60/342 (17%)
Query: 120 ADVAIRLD-----LIAKVQGIEQ----AASYFNCVP-EKLKLP-SVYIALLNAYACAKSA 168
+D +RLD L+ ++ G E A+ F+ +P EK L Y +L+AYA +
Sbjct: 173 SDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKY 232
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEEKGIDCDKYTFSI 227
++A + +M GL + YN M++VY + G ++ ++ L+ EM KG++ D++T S
Sbjct: 233 KRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCST 292
Query: 228 LLSACAAASDGEGIDKIVAMME----------------------------------ADRG 253
++SAC + K +A ++ D
Sbjct: 293 VISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNN 352
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDD 312
D Y A+ YV+AG D+ +AV+ + +M N + Y VI Y G +DD
Sbjct: 353 CPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAIT--YTTVIDAYGKAGREDD 410
Query: 313 VLRVWKRYKQ-----NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
LR++ + K N+ YN V++ L K E K+ E + N C R
Sbjct: 411 ALRLFSKMKDLGCAPNVYTYNS----VLAMLGKKSRTEDVIKVLCEMK-LNGCAPNRATW 465
Query: 368 HLIDAYC-RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+ + A C G + ++ + + G EP+ T+ + + Y
Sbjct: 466 NTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSY 507
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 150/357 (42%), Gaps = 61/357 (17%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
NC E K + L+++YA S + + +M G YN+++N G+
Sbjct: 490 NCGFEPDK--DTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGD 547
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
+K +S++ +M+ KG ++ ++S+LL + A + GI+K+ + D V W +
Sbjct: 548 WKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEI-YDGQVFPSWILLR 606
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDV------LRV 316
T LS+ LR E RA+D Q G K D+ L +
Sbjct: 607 TLV-------LSNHKCRHLRGME---------RAFD----QLQKYGYKPDLVVINSMLSM 646
Query: 317 WKRYK------------------QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
+ R K NL YN C++ ++ D AE++ + ++
Sbjct: 647 FSRNKMFSKAREMLHFIHECGLQPNLFTYN----CLMDLYVREDECWKAEEVLKGIQNSV 702
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
D+ N +I +CR+GL+ +A ++ + +G +P + T+ +GY ++
Sbjct: 703 PEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEAN 762
Query: 419 EAMKKALVLLEAGTRWKPSKECLAACL-GYYKKERDIEGADYFIKLLTGKEI-ISAD 473
E ++ ++E R PS+ + GY K + E D+ K+ KEI IS D
Sbjct: 763 EVIR---FMIEHNCR--PSELTYKILVDGYCKAGKHEEAMDFVTKI---KEIDISFD 811
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 125/310 (40%), Gaps = 41/310 (13%)
Query: 163 ACAKSA--EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
AC + ++A + +++ G T+ YNSM+ V+ + G Y + S++ EME+
Sbjct: 296 ACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPP 355
Query: 221 DKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALA 279
D T++ L + A EG+ I M +GV+ + Y T Y KAG D AL
Sbjct: 356 DSITYNELAATYVRAGFLDEGMAVIDTM--TSKGVMPNAITYTTVIDAYGKAGREDDALR 413
Query: 280 VLRK-------------SEVLMMHNKFSRAYDFVI------------------TQYAAC- 307
+ K + VL M K SR D + T A C
Sbjct: 414 LFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCS 473
Query: 308 --GNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
G + V +V + K + + +ISS + + K++ E +
Sbjct: 474 EEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVT 533
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
N L++A RG AE++I Q +G +PN ++ L+ Y + +G+E ++K
Sbjct: 534 TYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNV-RGIEKVEKE 592
Query: 425 LVLLEAGTRW 434
+ + W
Sbjct: 593 IYDGQVFPSW 602
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 55/305 (18%), Positives = 122/305 (40%), Gaps = 38/305 (12%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y +++AY A + A + +M+D G YNS++ + + + + ++ EM
Sbjct: 394 TYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEM 453
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ G ++ T++ +L+ C+ ++K++ M+ + G D + T S Y + G
Sbjct: 454 KLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMK-NCGFEPDKDTFNTLISSYARCGS 512
Query: 274 ---SDKALAVLRKS---EVLMMHNKFSRA----------------------------YDF 299
S K + KS + +N A Y
Sbjct: 513 EVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSL 572
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYNRGYI--CVISSLLKFDGMESAEKIFEEWESR 357
++ Y+ GN + +V K +V+ + ++ S K + E+ F++ +
Sbjct: 573 LLHCYSKAGNVRGIEKVEKEIYDG-QVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKY 631
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
D+ + N ++ + R + KA +++ G +PN+ T+ + Y++ ++ K
Sbjct: 632 GYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKA 691
Query: 418 VEAMK 422
E +K
Sbjct: 692 EEVLK 696
>gi|8778536|gb|AAF79544.1|AC022464_2 F22G5.3 [Arabidopsis thaliana]
Length = 555
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 152/362 (41%), Gaps = 14/362 (3%)
Query: 79 RPLDMEQLRIIIKK--FRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIE 136
R L+M L +++ + F L K L + W+ ++ + L + + L+ K+ G+
Sbjct: 115 RALEMSNLGMLLDRNEFLLMKIL---LNLMEWIIRERPYRLGELEYSYLLEFTVKLHGVS 171
Query: 137 QAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNV 196
Q F VP++ + +Y L+ A A M++MR+ G + YN ++
Sbjct: 172 QGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYRTSHLVYNRLIIR 231
Query: 197 YYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL 256
G K + + M+ T+ IL+ A + +G+ K M+ GV
Sbjct: 232 NSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAFDGMK-KAGVEP 290
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV 316
+ Y A + A L A A + E + + +S D ++ Y G + ++ R
Sbjct: 291 NEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWS-TLDILMILYGRLGKEKELART 349
Query: 317 WKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRR 376
W + V ++ Y+ + + ++ AE+++ E ++ + N L+ YC+
Sbjct: 350 WNVIRGFHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKETEQFNSLLSVYCKD 409
Query: 377 GLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKP 436
GL+ KA + + G +PN T+ +A G + + MK+AL +E G K
Sbjct: 410 GLIEKAIGVFREMTGNGFKPNSITYRHLALGCAK-------AKLMKEALKNIEMGLNLKT 462
Query: 437 SK 438
SK
Sbjct: 463 SK 464
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 134/333 (40%), Gaps = 61/333 (18%)
Query: 136 EQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
++A S F + E PS+ Y LL A K + I+ Q+ + G+ +I +N++
Sbjct: 30 QEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPDSIFFNAV 89
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD-- 251
+N + ++GN + +M+E G+ T++ L+ A E K++ +M +
Sbjct: 90 INAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGN 149
Query: 252 ---------------------------------RGVVLDWTVYATAASGYVKAGLSDKAL 278
G+ D Y T A+ Y + G D+A
Sbjct: 150 VKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAE 209
Query: 279 AVLRKSEVLMMHNKF----SRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYN- 328
V +L M N R +++ Y G + LR R K+ NL ++N
Sbjct: 210 GV-----ILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNS 264
Query: 329 --RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
+G++ ++ DG++ + EE+ + D+ + +++A+ G + K +
Sbjct: 265 LIKGFVAIMDR----DGVDEVLNLMEEFGVK---PDVITFSTIMNAWSTAGFMEKCREIF 317
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
G EP+ + ++A GY++ + EK E
Sbjct: 318 DDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEE 350
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 108/269 (40%), Gaps = 36/269 (13%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y + AYA + ++AE ++ +M++ G+ +M+ Y + G ++ + M
Sbjct: 191 TYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRM 250
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+E GI + F+ L+ A D +G+D+++ +ME + GV D ++T + + AG
Sbjct: 251 KELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLME-EFGVKPDVITFSTIMNAWSTAGF 309
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
+K + DD++ K ++ Y
Sbjct: 310 MEKCREIF-----------------------------DDMV------KAGIEPDAHAYSI 334
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+ ++ E AE++ ++ I +I +C G + A + K RG
Sbjct: 335 LAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRG 394
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
PN++T+ + G+ + Q K E ++
Sbjct: 395 ISPNLKTFETLIWGFAEARQPWKAEEILQ 423
>gi|255569835|ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534795|gb|EEF36485.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 913
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 152/366 (41%), Gaps = 31/366 (8%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+ ++ E G +D+ +++ F + AL + +M + L P + + +
Sbjct: 465 VFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLDYMQTQK---LKPNSITYNVVVE 521
Query: 130 AKVQG--IEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
+ G +++A + FN + +K L + Y A++N Y A A + ++ +G VK++
Sbjct: 522 SLCMGGKVKEAEAVFNSIEDK-SLDN-YFAMINGYCKANHTAGAAKLFFRLSVKGHVKRS 579
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
YN + N+ + G+ + L+ M ++ K+ + L ++ A G+ K ++
Sbjct: 580 CCYNLLKNLC-EEGDNDGILMLLETMLNLNVEPSKFIYGKLFTSLCRAGGAAGMRKAQSV 638
Query: 248 MEA--DRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-------------SEVLMMHNK 292
+ RG D Y + Y + +A+ + + +L H+K
Sbjct: 639 FDMLLKRGWTPDLIAYTIMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHK 698
Query: 293 --FSRAYDFVITQYAACGNKD--DVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESA 347
+ Y A GN+D D L +W K +K Y +I K D + A
Sbjct: 699 AHIKKVYS---AANAKGGNEDIFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDA 755
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+F+E R L DI L+ C+RG + +A L+ + L+G P+ RT + G
Sbjct: 756 IGVFDEMIERGLEPDIITYTALLSGCCQRGDVDRAVNLLDQMSLKGISPDTRTMSALLHG 815
Query: 408 YLQNNQ 413
L+ Q
Sbjct: 816 ILKTRQ 821
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 109/248 (43%), Gaps = 9/248 (3%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF-SI 227
+KAE +++ M G+V Y +++ + + GN K + ++EM KG+ + SI
Sbjct: 320 DKAESVLRDMEKEGMVPDMHCYTALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSI 379
Query: 228 LLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
L C E +D+ G+ LD Y K G ++A+ +L + ++
Sbjct: 380 LHCLCELGMHSEVVDQFNQF--KSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMK 437
Query: 288 MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMES 346
+ N Y +I Y GN D +V++ ++N +++ Y ++S +
Sbjct: 438 QI-NMDVMHYTTLINGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATE 496
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
A + + +++ L + N ++++ C G + +AE + + + ++ ++ M
Sbjct: 497 ALNLLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFNSIE----DKSLDNYFAMIN 552
Query: 407 GYLQNNQS 414
GY + N +
Sbjct: 553 GYCKANHT 560
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 23/270 (8%)
Query: 151 LPSVYIA--LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
+P ++I L+N+ + A + +Q++ GL Y ++ G+ ++
Sbjct: 195 VPHIFICNFLMNSLIKNSKLDMALAVYKQLKRLGLSPNDYTYAIVIKALCINGSLEEAMY 254
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG--VVLDWTVYATAAS 266
++ EMEE GI + ++ + E D +++A +G + LD Y A
Sbjct: 255 VIKEMEESGITPTGFAYTAYIEGLCV---NEMSDLGYQVLQAWKGANIPLDMYAYTVAVR 311
Query: 267 GYVKAGLSDKALAVLRKSE----VLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ 322
G+ DKA +VLR E V MH Y +I ++ GN +L+ + +
Sbjct: 312 GFCNELKFDKAESVLRDMEKEGMVPDMH-----CYTALICRFCKAGN---LLKAYAFLNE 363
Query: 323 NLKVYNRGYICVISSLLKF---DGMES-AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
+ + ++ S+L GM S F +++S L D N+++DA C+ G
Sbjct: 364 MMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQFKSLGLFLDGVSYNNVVDALCKLGK 423
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
L +A TL+ + +++ +V + + GY
Sbjct: 424 LEEAITLLDEMKMKQINMDVMHYTTLINGY 453
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 114/275 (41%), Gaps = 38/275 (13%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
E+A ++ +M+ + + + Y +++N Y GN + EM E GI+ D T+ +L
Sbjct: 425 EEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDVL 484
Query: 229 LSA-CAAASDGEGIDKI---------------------------VAMMEADRGVVLDWTV 260
+S C E ++ + V EA + D ++
Sbjct: 485 VSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFNSIEDKSL 544
Query: 261 --YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK 318
Y +GY KA + A + + V H K S Y+ ++ G+ D +L + +
Sbjct: 545 DNYFAMINGYCKANHTAGAAKLFFRLSV-KGHVKRSCCYN-LLKNLCEEGDNDGILMLLE 602
Query: 319 RYKQNLKVYNRGYIC--VISSLLKFD---GMESAEKIFEEWESRNLCHDIRIPNHLIDAY 373
NL V +I + +SL + GM A+ +F+ R D+ +I +Y
Sbjct: 603 TM-LNLNVEPSKFIYGKLFTSLCRAGGAAGMRKAQSVFDMLLKRGWTPDLIAYTIMITSY 661
Query: 374 CRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
CR L +A L + + RG +P++ T+ ++ G+
Sbjct: 662 CRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGH 696
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 110/246 (44%), Gaps = 9/246 (3%)
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
G+ T+ YN ++NV + K L+++ EM E+GI D TF+ L+ A A +
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQ---V 201
Query: 242 DKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYD 298
V M+E + GV D T + T G+V+ G AL V K+ +L M ++ +
Sbjct: 202 RTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRV--KARMLEMGCSPTKVTVN 259
Query: 299 FVITQYAACGNKDDVLR-VWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
+I Y G +D L + + + Y ++ L + + A K+ +
Sbjct: 260 VLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQE 319
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
D+ N +++ C+ G L +A+ ++ + RG P++ T+ + N+ E+
Sbjct: 320 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEA 379
Query: 418 VEAMKK 423
++ ++
Sbjct: 380 LDLARQ 385
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 106/257 (41%), Gaps = 13/257 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY LLN + E + +M +RG+ + +N++M + + ++ EM
Sbjct: 152 VYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 211
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
G+ D+ TF+ L+ + ++ A M + G +GY K G
Sbjct: 212 SSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARM-LEMGCSPTKVTVNVLINGYCKLGR 270
Query: 274 SDKALAVLRKSEVLMMHNKFSR---AYD-FV--ITQYAACGNKDDVLRVWKRYKQNLKVY 327
+ AL +++ + N F Y+ FV + Q G+ V+ V + + V+
Sbjct: 271 VEDALGYIQQE----IANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVF 326
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y V++ L K +E A+ I + R DI N LI A C L +A L
Sbjct: 327 T--YNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLAR 384
Query: 388 KAQLRGTEPNVRTWYLM 404
+ L+G P+V T+ ++
Sbjct: 385 QVTLKGLSPDVYTFNIL 401
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 121/317 (38%), Gaps = 46/317 (14%)
Query: 144 CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
C P K+ + L+N Y E A +QQ G I YN+ +N Q G+
Sbjct: 251 CSPTKVTVN----VLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHV 306
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYAT 263
+M M ++G D D +T++I+++ E I+ M +RG + D T + T
Sbjct: 307 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM-VERGCLPDITTFNT 365
Query: 264 AASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC--GNKDDVLRVWKRYK 321
++AL + R+ + + Y F I A C G+ LR+++ K
Sbjct: 366 LIVALCSGNRLEEALDLARQ---VTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMK 422
Query: 322 Q-----NLKVYNR-------------------------------GYICVISSLLKFDGME 345
+ YN Y +I L K +E
Sbjct: 423 SSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIE 482
Query: 346 SAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
AE++F++ + + + + N LID C+ + A LI + G +PN T+ +
Sbjct: 483 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSIL 542
Query: 406 TGYLQNNQSEKGVEAMK 422
T Y + +K + ++
Sbjct: 543 THYCKQGDIKKAADILQ 559
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 135/334 (40%), Gaps = 20/334 (5%)
Query: 100 SHALQISMWMTKKSNFVLTPADV---AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV-- 154
HAL++ M ++ + DV I ++ + K +E+A N + E+ LP +
Sbjct: 307 GHALKVMDVMVQEGH----DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITT 362
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ L+ A E+A + +Q+ +GL +N ++N + G+ + L EM+
Sbjct: 363 FNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMK 422
Query: 215 EKGIDCDKYTFSILL-SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
G D+ T++ L+ + C+ G+ +D + M A G Y T G K
Sbjct: 423 SSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESA--GCPRSTVTYNTIIDGLCKKMR 480
Query: 274 SDKALAVLRKSEVLMMHNKFSR-AYDFVITQYAACGNK--DDVLR-VWKRYKQNLKVYNR 329
++A V + ++ SR A F C +K DD + + + + L+ N
Sbjct: 481 IEEAEEVFDQMDL----QGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNI 536
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +++ K ++ A I + + D+ LI+ C+ G A L+
Sbjct: 537 TYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGM 596
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+++G + + + + N + + ++
Sbjct: 597 RIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFRE 630
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N A + A +++ MR +G+ YN ++ ++ N + +L EM
Sbjct: 573 YGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMT 632
Query: 215 EKGIDCDKYTFSILLSA-C-AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
E G D +T+ I+ C S E D ++ M+ D+G + +++ + A G + G
Sbjct: 633 EVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMV--DKGFIPEFSSFRMLAEGLLNLG 690
Query: 273 LSD 275
+ D
Sbjct: 691 MDD 693
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 131/306 (42%), Gaps = 20/306 (6%)
Query: 117 LTPADVA-------IRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAE 169
+T +DVA I +D AK+ I +A + + EK P++ Y K +
Sbjct: 498 VTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGK 557
Query: 170 KAEII--MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSI 227
AE + + ++ GLV ++ Y ++MN Y + G+ + ++HEME K I + T+++
Sbjct: 558 LAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTV 617
Query: 228 LLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV 286
++ C E + +++ M A RG+ D Y T + KA KA + +
Sbjct: 618 VVKGLCKEGRLHESV-QLLKYMYA-RGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQ--- 672
Query: 287 LMMHNKFSRA---YDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFD 342
M+ + + Y+ +I GN D R+ + Q++++ Y +I +
Sbjct: 673 -MLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKG 731
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
+++A F + R IR + +I+ C+R L+ A+ G P+
Sbjct: 732 DVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICL 791
Query: 403 LMATGY 408
+M +
Sbjct: 792 VMLNAF 797
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 124/301 (41%), Gaps = 34/301 (11%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PSV + AL++ + S + A+ M GL+ YN +++ G+ ++
Sbjct: 268 PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEF 327
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
++ME G++ D T++IL + G K+V M + G+ D Y G+
Sbjct: 328 TNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLN-GLNPDLVTYTILICGHC 386
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFS-RAYDFVITQYAACGNKDDVLRVWKR-----YKQN 323
+ G +++ + K ++L K S Y +++ G D+ + + K +
Sbjct: 387 QMGNIEESFKL--KEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPD 444
Query: 324 LKVYNRG---------------------YIC--VISSLLKFDGMESAEKIFEEWESRNLC 360
L Y+RG ++C +IS L + + A+ F+ ++
Sbjct: 445 LLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVA 504
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
+I + N +ID Y + G + +A + +G P + T+ + G+ + + + V+
Sbjct: 505 EEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKL 564
Query: 421 M 421
+
Sbjct: 565 L 565
>gi|62321090|dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]
Length = 577
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 145/350 (41%), Gaps = 47/350 (13%)
Query: 89 IIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEK 148
++K RF +LQ +W K F +D + GI +A F+ +PE+
Sbjct: 132 LVKASSFASRFGESLQAHIW---KFGFGFHVKIQTTLIDFYSATGGIREARKVFDEMPER 188
Query: 149 -----LKLPSVY------------------------IALLNAYACAKSAEKAEIIMQQMR 179
+ S Y L+N Y + E+AE + QM
Sbjct: 189 DDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMP 248
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
VK I + +M+ Y Q Y++ ++ ++M E+GI D+ T S ++SACA E
Sbjct: 249 ----VKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLE 304
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
I K V M G VLD + + Y K G ++AL V L N F ++
Sbjct: 305 -IGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFN---LPKKNLF--CWNS 358
Query: 300 VITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEW-ESR 357
+I AA G + L+++ + + +++K ++ V ++ ++ +I+ +
Sbjct: 359 IIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDY 418
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
++ ++ ++ + + GL+++A LI + EPN W + G
Sbjct: 419 SIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEF---EPNAVIWGALLDG 465
>gi|224119538|ref|XP_002318099.1| predicted protein [Populus trichocarpa]
gi|222858772|gb|EEE96319.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 142/319 (44%), Gaps = 17/319 (5%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P V AL+ ++ ++A II +M RG+ I YN++M+ Y ++ ++ + L
Sbjct: 46 PEVLGALIKSFCDEGLKKEALIIQTEMERRGISSNAIIYNTLMDSYSKSNQIEEAEGLYS 105
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
EM+ KG+ TF+IL+ A + + I+K++ M+ D G+ + Y S Y +
Sbjct: 106 EMQAKGLKPTSATFNILMDAYSRRMQPDIIEKLLLEMQ-DAGLAPNAKSYTCLISAYGRQ 164
Query: 272 -GLSDKAL-AVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYN 328
+SD A A LR + + +S Y +I Y+ G + ++ ++ +K
Sbjct: 165 KKMSDMAADAFLRMKKAGIKPTSYS--YTALIHAYSVSGWHEKAYITFENMQREGIKPSI 222
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWE--SRNLCHDIRIP-NHLIDAYCRRGLLHKAETL 385
Y ++ + F + + + W+ R R+ N L+D + ++G +A +
Sbjct: 223 ETYTTLLDA---FRRAGDTKTLMDIWKLMMREKVEGTRVTFNILLDGFAKQGHYMEARDV 279
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACL 445
I + + G P V T+ ++ Y + Q K + +K+ L + +P +
Sbjct: 280 INEFKKFGLHPTVMTYNMLMNAYARGGQDSKLPQLLKEMATL-----KLEPDSITYTTMI 334
Query: 446 GYYKKERDIEGADYFIKLL 464
Y + RD A ++ K++
Sbjct: 335 YAYVRVRDFRRAFFYHKMM 353
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 121/266 (45%), Gaps = 7/266 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY L++ + +A I+++M G+ I Y++++ + G + L+ EM
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ G+ D +T++ L+ D +G +++ M + G++ + Y +G + G
Sbjct: 410 IKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMR-NSGILPNVYSYGIMINGLCQNGE 468
Query: 274 SDKALAVLRK--SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRG 330
S +A +L + SE L N F Y +I ++ GN ++ K N+
Sbjct: 469 SKEAGNLLEEMISEGLK-PNAF--MYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFC 525
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I L ME AE+ + + + R L D + LI YC+ G L KA+ L+ +
Sbjct: 526 YNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQML 585
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEK 416
G +PN T+ + GY ++N EK
Sbjct: 586 NSGLKPNADTYTDLLEGYFKSNDYEK 611
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 36/271 (13%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +L+ + E+AE Q++ RGLV Y+ +++ Y +TGN +K D L+ +M
Sbjct: 526 YNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQML 585
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
G+ + T++ LL ++D E + I+ M G D +Y G+
Sbjct: 586 NSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGS-GDKPDNHIY----------GIV 634
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
+ L+ EV M V+T+ G D L +Y+ +
Sbjct: 635 IRNLSRSENMEVAFM----------VLTEVEKNGLVPD-----------LHIYSS----L 669
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
IS L K ME A + +E L I N LID +CR G + +A + +G
Sbjct: 670 ISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGL 729
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
PN T+ + G +N + K+ L
Sbjct: 730 VPNCVTYTALIDGNCKNGDITDAFDLYKEML 760
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 141/313 (45%), Gaps = 47/313 (15%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
++ V +E+A Y+ V ++ +P Y L++ Y + EKA+ +++QM + GL
Sbjct: 533 LSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPN 592
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
Y ++ Y+++ +Y+K+ S++ M G D + + I++ + + + E ++
Sbjct: 593 ADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLT 652
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK------SEVLMMHNKF------- 293
+E + G+V D +Y++ SG K +KA+ +L + ++ +N
Sbjct: 653 EVEKN-GLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRS 711
Query: 294 ---SRA---YDFVITQ--------YAA-----CGNKDDVLRVWKRYKQNLKVYNRG---- 330
SRA +D ++ + Y A C N D + + YK+ L +RG
Sbjct: 712 GDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGD-ITDAFDLYKEML---DRGIAPD 767
Query: 331 ---YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y + + +E A + EE +R ++ + N L+ +C+RG L + E L++
Sbjct: 768 AFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLH 826
Query: 388 KAQLRGTEPNVRT 400
R PN +T
Sbjct: 827 VMMDREIVPNAQT 839
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 129/305 (42%), Gaps = 22/305 (7%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGL 183
++L+ K++G + A LP VY + A+ A+ + A+ + ++MR R
Sbjct: 224 MELLWKLKGFMEGAGI---------LPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDC 274
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ YN M++ ++G ++ EM + G+ D +T+ L++ S +
Sbjct: 275 AMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKA 334
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS-EVLMMHNKFSRAYDFVIT 302
++ M G+ + VY T G++K G + +A +L++ + NK YD +I
Sbjct: 335 LLDEMSCS-GLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKI--MYDNLIR 391
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRG----YICVISSLLKFDGMESAEKIFEEWESRN 358
G + R K K+ +KV R Y ++ + + A ++ E +
Sbjct: 392 GLCKIGQ---LGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSG 448
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
+ ++ +I+ C+ G +A L+ + G +PN + + G+ +
Sbjct: 449 ILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLAC 508
Query: 419 EAMKK 423
EA++K
Sbjct: 509 EALEK 513
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 109/226 (48%), Gaps = 19/226 (8%)
Query: 107 MWMTKKSNFVLTPADVAIRLDLIA---KVQGIEQAASYFNCVPEKLKLPSV--YIALLNA 161
M +T+ L P D+ I LI+ K+ +E+A + + ++ P + Y AL++
Sbjct: 649 MVLTEVEKNGLVP-DLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDG 707
Query: 162 YACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCD 221
+ + +A + + +GLV + Y ++++ + G+ L EM ++GI D
Sbjct: 708 FCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPD 767
Query: 222 KYTFSILLSACAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAGL---SDK 276
+ +++L + C+ A+D +++ + + E +RG + +++ T G+ K G ++K
Sbjct: 768 AFVYNVLATGCSDAAD---LEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEK 823
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ 322
L V+ E++ ++ + V++++ G + RV+ +Q
Sbjct: 824 LLHVMMDREIV----PNAQTVEKVVSEFGKAGKLGEAHRVFAELQQ 865
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 106/280 (37%), Gaps = 19/280 (6%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+V L++ Y S A ++ M D GL N ++ + + L L
Sbjct: 174 AVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGF 233
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
ME GI D YT+S + A A D + K+ M R ++ Y SG ++G
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRR-RDCAMNEVTYNVMISGLCRSG 292
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR---------YKQN 323
++A E ++ + A+ + C K L+ K K N
Sbjct: 293 AVEEAFGF---KEEMVDYGLSPDAFTYGALMNGLC--KGSRLKEAKALLDEMSCSGLKPN 347
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
+ VY ++ +K A I +E S + + + ++LI C+ G L +A
Sbjct: 348 IVVYGT----LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRAS 403
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
L+ + G P+ T+ + G+ Q + + E + +
Sbjct: 404 KLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNE 443
>gi|356544457|ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 711
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 137/312 (43%), Gaps = 21/312 (6%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
AL+ ++ +A II+ ++ +G+ I YN++M+ Y ++ ++ + L EM+ K
Sbjct: 344 ALIKSFCVEGLMSEALIILSELEKKGVSSNAIVYNTLMDAYCKSNRVEEAEGLFIEMKTK 403
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK----AG 272
GI + TF+IL+ A + E ++K++A M+ D G+ + Y S Y K +
Sbjct: 404 GIKHTEATFNILMYAYSRKMQPEIVEKLMAEMQ-DAGLKPNAKSYTCLISAYGKQKNMSD 462
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGY 331
++ A ++K + S +Y +I Y+ G + ++ ++ +K Y
Sbjct: 463 MAADAFLKMKKDGI----KPTSHSYTALIHAYSVSGWHEKAYAAFENMQREGIKPSIETY 518
Query: 332 ICVISSLLKFDGMESAEKIFEEWE--SRNLCHDIRIP-NHLIDAYCRRGLLHKAETLIYK 388
++ + + ++ KI W+ R R+ N L+D + + G +A +I K
Sbjct: 519 TALLDAFRRAGDTQTLMKI---WKLMRRYKVEGTRVTFNTLVDGFAKHGHYKEARDVISK 575
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYY 448
G P V T+ ++ Y + Q K E +++ A KP + + +
Sbjct: 576 FANVGLHPTVMTYNMLMNAYARGGQHSKLPELLEEM-----AAHNLKPDSVTYSTMIYAF 630
Query: 449 KKERDIEGADYF 460
+ RD A ++
Sbjct: 631 LRVRDFSQAFFY 642
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 113/284 (39%), Gaps = 50/284 (17%)
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILLSACAAA 235
+M + G + + YN+ ++ + G K ++ EM+ GI D TF SI+ C A
Sbjct: 177 EMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKAN 236
Query: 236 SDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL-------- 287
+ M+E RG V D Y+ +A D VL + +
Sbjct: 237 RIDDAFQVFKGMLE--RGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEV 294
Query: 288 MMHNKFSRA----------------------------YDFVITQYAACGNKDDVLRVWKR 319
HN F A Y+FVI GN DD ++ ++
Sbjct: 295 YTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRK 354
Query: 320 Y------KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC-HDIRIPNHLIDA 372
K ++ +N +IS K + A ++ E +++N+C D+ N LID
Sbjct: 355 MLDSGCCKPDVIFFNT----LISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDG 410
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ G L +A+ L+ + Q G +PNV T+ + GY ++ E+
Sbjct: 411 QSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEE 454
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 152/368 (41%), Gaps = 26/368 (7%)
Query: 72 DQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIA- 130
D+ +E GR D+ I + L++ M + P DV +I+
Sbjct: 176 DEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGG----IPPDVVTFCSIISG 231
Query: 131 --KVQGIEQAASYF------NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMR--D 180
K I+ A F CVP+ L Y +L+ + A + + +++ M+
Sbjct: 232 LCKANRIDDAFQVFKGMLERGCVPDSL----TYSIMLDNLSRANRLDTVDEVLEHMQAMK 287
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
G V + +N+ + ++G + +++ M E G + +++ ++ + + +
Sbjct: 288 AGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDD 347
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
K+ M D + T SG+ KAG +A +L + + + Y+ +
Sbjct: 348 AWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTL 407
Query: 301 ITQYAACGN-KDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
I + G+ K L + + K Y +I+ K E AE +F+E ++
Sbjct: 408 IDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGC 467
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG----TEPNVRTWYLMATGYLQNNQSE 415
DI N ++ A+ + G++ KAE +Y+ QL+ P+ T+ ++ GY + +E
Sbjct: 468 FPDIITYNTVLSAFSKAGMMSKAEG-VYQ-QLKNKTSYCSPDAITYRILIDGYCRAEDTE 525
Query: 416 KGVEAMKK 423
+G+ +++
Sbjct: 526 QGLTLLQE 533
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Query: 136 EQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRG--LVKKTIDYN 191
E+A S F+ + K P + Y +L+A++ A KAE + QQ++++ I Y
Sbjct: 453 EEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYR 512
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
+++ Y + + ++ +L+ EM +G CD YT+++L++ A + V D
Sbjct: 513 ILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLD 572
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
+ V +++ + +++ G + A +++++
Sbjct: 573 QDCVPSASIFNSLVRLFLRTGDVNSARSMVQE 604
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 124/295 (42%), Gaps = 25/295 (8%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y +L++ A + A +++Q++ G I Y++++ + + L+ EM
Sbjct: 82 TYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREM 141
Query: 214 EEKGIDCDKYTF-SILLSACAA--------ASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
+G C+ + + C A DG+ M+E+ R + D Y T
Sbjct: 142 ILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGD------EMIESGR--IPDVVTYNTF 193
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
SG KAG DK L +L + + + + +I+ DD +V+K +
Sbjct: 194 ISGLCKAGKLDKGLEMLEEMDRGGIPPDVV-TFCSIISGLCKANRIDDAFQVFKGMLERG 252
Query: 325 KVYNR-GYICVISSLLKFDGMESAEKIFEEWES--RNLCHDIRIPNHLIDAYCRRGLLHK 381
V + Y ++ +L + + +++ +++ E ++ ++ N I A CR G
Sbjct: 253 CVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPL 312
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKP 436
A+ ++ G+ PN+ ++ + G ++ + +A K + +L++G KP
Sbjct: 313 AKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVD---DAWKLSRKMLDSGC-CKP 363
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 143/359 (39%), Gaps = 32/359 (8%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKS--------NFV 116
D + +L++ G P D+ II R A Q+ M ++ + +
Sbjct: 204 DKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIM 263
Query: 117 LTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEII 174
L A RLD + +V QA CV E VY A + A + A+ I
Sbjct: 264 LDNLSRANRLDTVDEVLEHMQAMKA-GCVME------VYTHNAFIGALCRSGKFPLAKNI 316
Query: 175 MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC--DKYTFSILLSAC 232
+ M + G + + YN +++ ++GN L +M + G C D F+ L+S
Sbjct: 317 LLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGC-CKPDVIFFNTLISGF 375
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
A +++ M+A V D Y T G K G +A +L++ + +
Sbjct: 376 CKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPN 435
Query: 293 FSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVYNRGYICVISSLLKFDGMESA 347
Y +I YA G ++ ++ K ++ YN V+S+ K M A
Sbjct: 436 VV-TYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNT----VLSAFSKAGMMSKA 490
Query: 348 EKIFEEWESR-NLCHDIRIPNH-LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
E ++++ +++ + C I LID YCR + TL+ + RG + T+ ++
Sbjct: 491 EGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVL 549
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 113/259 (43%), Gaps = 38/259 (14%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
LD + K ++ A + +P K +P+V Y +++ YA A ++A + +M+ +
Sbjct: 219 LDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASI 278
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ YN+++++Y + G +++ ++ EME GI D T++ LL E + +
Sbjct: 279 GLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKR 338
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ 303
+ M+A+R + + Y+T Y K GL +A+ V R +
Sbjct: 339 VFEEMKAER-IFPNLLTYSTLIDVYSKGGLYQEAMEVFR--------------------E 377
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
+ G K DV+ Y +I +L K +ESA +E + ++
Sbjct: 378 FKKAGLKADVVL---------------YSALIDALCKNGLVESAVSFLDEMTKEGIRPNV 422
Query: 364 RIPNHLIDAYCRRGLLHKA 382
N +IDA+ R G++ A
Sbjct: 423 VTYNSIIDAFGRSGIVEDA 441
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 118/269 (43%), Gaps = 14/269 (5%)
Query: 163 ACAKSA----EKAEI-----IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
AC K AEI + +M RG+ + YN++++ + G +M EM
Sbjct: 179 ACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEM 238
Query: 214 EEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
K I + T+S ++ A A E ++ M A G LD Y T S Y K G
Sbjct: 239 PRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIG--LDRVSYNTLLSIYAKLG 296
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GY 331
++AL V ++ E + K + Y+ ++ Y G ++V RV++ K N Y
Sbjct: 297 RFEEALNVCKEMESSGI-KKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTY 355
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I K + A ++F E++ L D+ + + LIDA C+ GL+ A + + +
Sbjct: 356 STLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTK 415
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
G PNV T+ + + ++ E E+
Sbjct: 416 EGIRPNVVTYNSIIDAFGRSGIVEDATES 444
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 145/335 (43%), Gaps = 20/335 (5%)
Query: 99 FSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YI 156
FS A+Q + +K N + D + K+ A +++ + + P V +
Sbjct: 171 FSDAIQ-CFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFN 229
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
L++ +A+++ ++ RGL + +N+++N Y ++GN + L M E
Sbjct: 230 VLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMEN 289
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
+ D +T+S+L++ + +K+ M DRG+V + + T +G+ G +D
Sbjct: 290 RVFPDVFTYSVLINGLCKEGQLDDANKLFLEM-CDRGLVPNDVTFTTLINGHCVTGRADL 348
Query: 277 ALAVLR-------KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLR-VWKRYKQNLKVYN 328
+ + + K +V+ Y+ +I G+ + + V + ++ LK
Sbjct: 349 GMEIYQQMLRKGVKPDVI--------TYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDK 400
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y +I K +ESA +I +E + D LI +CR G + +AE + +
Sbjct: 401 FTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLRE 460
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G +P+ T+ ++ G+ + + G + +K+
Sbjct: 461 MLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKE 495
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 112/273 (41%), Gaps = 44/273 (16%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+ L+N + A+ I QQM +G+ I YN+++N + G+ ++ L+ EM
Sbjct: 332 TFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEM 391
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
++G+ DK+T+++L+ C D E +I M G+ LD + SG+ + G
Sbjct: 392 TQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEM-VKEGIELDNVAFTALISGFCREGQ 450
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
+A LR E+L + +K + Y
Sbjct: 451 VIEAERTLR--EML---------------------------------EAGIKPDDATYTM 475
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
VI K +++ K+ +E + + N L++ C++G + A L+ G
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535
Query: 394 TEPNVRTWYLMATGYLQNN--------QSEKGV 418
P+ T+ ++ G+ ++ QSEKG+
Sbjct: 536 VVPDDITYNILLEGHCKHGNREDFDKLQSEKGL 568
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y +++ + + ++++M+ G V + YN ++N + G K + L+
Sbjct: 471 ATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDA 530
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYAT 263
M G+ D T++ILL + E DK +++++G+V D+ Y +
Sbjct: 531 MLNLGVVPDDITYNILLEGHCKHGNREDFDK----LQSEKGLVQDYGSYTS 577
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 174/413 (42%), Gaps = 48/413 (11%)
Query: 64 NDSMVPLLDQW-VEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
+D + LLD+ + G LD+ ++ R+ ALQ+ + ++ V T
Sbjct: 160 HDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAEL-RRQGVVPTIVTY 218
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKL----PSVYIALLNAYACAKSA--EKAEIIMQ 176
+ LD+ + + ++ + E+++ P + A AC + ++A +
Sbjct: 219 NVVLDVYGR---MGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFE 275
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
++ RG V + YN+++ V+ + GNY + ++ EME+ G D T++ L A A
Sbjct: 276 DLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAG 335
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL--------------- 281
E K + M + +G++ + Y T + Y G D+ALA+
Sbjct: 336 FFEEAAKCLDTMTS-KGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTY 394
Query: 282 -----------RKSEVLMMHNKFSRA---YDFVI--TQYAACGNK---DDVLRVWKRYKQ 322
R + +L M + SR+ + V T A CG + D V RV K
Sbjct: 395 NLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKS 454
Query: 323 -NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
+++ Y +IS+ + A K+++E S + N L++ R+G
Sbjct: 455 CGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWST 514
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRW 434
A++++ K G +PN +++ L+ Y + + G+E+++K + + W
Sbjct: 515 AQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNA-AGIESIEKEVYVGTIFPSW 566
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 19/264 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++AY S A + +M G YN+++NV + G++ S++ +M
Sbjct: 463 TYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKM 522
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL-DWTVYATAASGYVKAG 272
+ G + ++S+LL A + GI+ I E G + W + T V A
Sbjct: 523 LKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEK--EVYVGTIFPSWVILRT----LVIAN 576
Query: 273 LSDKALAVLRKS--EVLMMHNKFSRA-YDFVITQYAACGNKDDVLRVWKRYKQ-----NL 324
+ L + K+ EV K ++ ++ YA G ++ KQ +L
Sbjct: 577 FKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDL 636
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
YN ++ K + AEKI ++ +S + D+ N +I+ +C++GL+ +A+
Sbjct: 637 ITYN----SLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQR 692
Query: 385 LIYKAQLRGTEPNVRTWYLMATGY 408
++ + G P V T++ + GY
Sbjct: 693 ILSEMIADGMAPCVVTYHTLVGGY 716
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 133/310 (42%), Gaps = 17/310 (5%)
Query: 111 KKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLK---LPSV--YIALLNAYACA 165
KK N V++P + + ++ A +N V E + P+V Y L+ +
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGA---YNIVKEMIASGCRPNVVIYTTLIKTFLQN 465
Query: 166 KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF 225
A ++++M+++G+ YNS++ + + S + EM E G+ + +T+
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Query: 226 SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
+S AS+ DK V M + GV+ + + + Y K G +A + R
Sbjct: 526 GAFISGYIEASEFASADKYVKEMR-ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRS-- 582
Query: 286 VLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKF 341
M+ ++ Y ++ DD +++ + + + Y +I+ K
Sbjct: 583 --MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 342 DGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
M+ A IF+E L ++ I N L+ +CR G + KA+ L+ + ++G PN T+
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Query: 402 YLMATGYLQN 411
+ GY ++
Sbjct: 701 CTIIDGYCKS 710
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 21/283 (7%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N ++ + +KA I +M + GL I YN ++ + ++G +K L+ EM
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
KG+ + T+ ++ + D ++ M+ +G+V D VY T G +
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL-KGLVPDSFVYTTLVDGCCRLNDV 748
Query: 275 DKALAVL--RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLR-----VWKRY-KQNLKV 326
++A+ + K F+ ++V ++ K +VL + R+ K N
Sbjct: 749 ERAITIFGTNKKGCASSTAPFNALINWVF-KFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
YN +I L K +E+A+++F + ++ NL + L++ Y + G + +
Sbjct: 808 YN----IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE 429
+A G EP+ + ++ +L+ + KALVL++
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMT-------TKALVLVD 899
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 113/257 (43%), Gaps = 5/257 (1%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
EKA+ + M GL+ + Y S++ Y + N ++ L+ EM+++ I YT+ +
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVL 287
+ ++ D +G IV M A G + +Y T +++ A+ VL++ E
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIAS-GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 288 MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMES 346
+ + F Y+ +I + D+ +N LK Y IS ++ S
Sbjct: 483 IAPDIF--CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
A+K +E + + + LI+ YC++G + +A + +G + +T+ ++
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 407 GYLQNNQSEKGVEAMKK 423
G +N++ + E ++
Sbjct: 601 GLFKNDKVDDAEEIFRE 617
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 123/295 (41%), Gaps = 30/295 (10%)
Query: 149 LKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
+ L Y L++ K E A+ ++ +M G+ Y+ +++ + N
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGI-DKIVAMMEA--DRGVVLDWTVYATAA 265
L+HEM GI+ Y + C EG+ +K A+ + G++ YA+
Sbjct: 334 LVHEMVSHGINIKPYMY----DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 266 SGY-----VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
GY V+ G + L ++K +++ Y V+ + G+ D + K
Sbjct: 390 EGYCREKNVRQGY--ELLVEMKKRNIVIS----PYTYGTVVKGMCSSGDLDGAYNIVKEM 443
Query: 321 -----KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
+ N+ +Y +I + L+ A ++ +E + + + DI N LI +
Sbjct: 444 IASGCRPNVVIYTT----LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ---SEKGVEAMKKALVL 427
+ +A + + + G +PN T+ +GY++ ++ ++K V+ M++ VL
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 602
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 114/251 (45%), Gaps = 15/251 (5%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
L+ A+ +A I++Q + GL +N +++ + + N+ ++ L+H M K
Sbjct: 233 LIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKN 292
Query: 218 IDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG-LSD 275
+ D +T+ +++ C + + A+ DRG D +Y T G+ K G L D
Sbjct: 293 RNPDIFTYQEIINGFCKNWMTLQAFEVFNAL--KDRGYAPDMVMYTTLIHGFCKMGQLED 350
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-----YKQNLKVYNRG 330
+ + + N++S Y+ +I + GN D+ ++++K+ YK+ N
Sbjct: 351 ASKLWFEMIDKGFLPNEYS--YNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNT- 407
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
+I L + A F E +N+ D+ N LI +CR G + ++ L+ + Q
Sbjct: 408 ---LILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQ 464
Query: 391 LRGTEPNVRTW 401
+G +P+ ++
Sbjct: 465 AKGLQPSTSSY 475
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 49/290 (16%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y ++N + +A + ++DRG + Y ++++ + + G + L EM
Sbjct: 299 TYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEM 358
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+KG ++Y+++ L+ C + E + M++ SGY +
Sbjct: 359 IDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLD----------------SGYKETT 402
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN-KDDVLRVWKRYKQNLKVYNRGY 331
LS L + L +H + AYDF + C N DV+ Y
Sbjct: 403 LSCNTLIL-----GLCLHGRTDEAYDFF--REMPCKNIVCDVIT---------------Y 440
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I + + + + +E +++ L HLI C+ G + +A+ +
Sbjct: 441 NTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHN 500
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKG--VEAMKKALVLLEAGTRWKPSKE 439
RG +P V T + +G E+G VE M+ + +L++ KP KE
Sbjct: 501 RGLQPMVCTRDHIISGL-----CEQGYVVEGMEWLITMLKSNL--KPQKE 543
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 151/348 (43%), Gaps = 14/348 (4%)
Query: 78 GRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQ 137
G +++ I+IK K+F A ++ WM ++ F ++ +AK +
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQG-FSPDVFSYGTLINSLAKNGYMSD 202
Query: 138 AASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKA-EIIMQQMRDRGLVKKTIDYNSMM 194
A F+ +PE+ P V Y L++ + A EI + ++ + YN M+
Sbjct: 203 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 262
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGV 254
N + G + + + H M++ D YT+S L+ + + +G ++ M A+ GV
Sbjct: 263 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM-AENGV 321
Query: 255 VLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKD 311
D VY T +GY++AG ++ L + + +M + R +Y+ +I D
Sbjct: 322 SPDVVVYNTMLNGYLRAGRIEECLELWK-----VMEKEGCRTVVSYNILIRGLFENAKVD 376
Query: 312 DVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+ + +W+ +++ + Y ++ L K + A I EE E+ D + +I
Sbjct: 377 EAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMI 436
Query: 371 DAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
+ CR G L + ++ + G +PN + G+++ ++ E +
Sbjct: 437 NGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDAL 484
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 141/347 (40%), Gaps = 44/347 (12%)
Query: 119 PADVAIR-LDLIAKVQGIEQAASYFNCVPEKLKL-PSV--YIALLNAYACAKSAEKAEII 174
P DVA+ + AK +QA F + E P + Y +LLNA + ++AE
Sbjct: 77 PEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESF 136
Query: 175 MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAA 234
GL YN ++ + + + K L++ M E+G D +++ L++ +
Sbjct: 137 FLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLIN--SL 194
Query: 235 ASDGEGIDKIVAMME-ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF 293
A +G D + E +RGV D Y G+ K G +L SE+ K
Sbjct: 195 AKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKG------DILNASEIWERLLKG 248
Query: 294 SR------AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-----YICVISSLLKFD 342
+Y+ +I CG D+ +W R K+N RG Y +I L
Sbjct: 249 PSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKN----ERGQDLYTYSTLIHGLCGSG 304
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
++ A ++++E + D+ + N +++ Y R G + + L + G V ++
Sbjct: 305 NLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYN 363
Query: 403 LMATGYLQNNQSEKGVEAMKKALVLLEAGTRWK--PSKECLAACLGY 447
++ G +N + + EA + W+ P K+C A + Y
Sbjct: 364 ILIRGLFENAKVD-------------EAISIWELLPEKDCCADSMTY 397
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYN--RGYICVISSLLKFDGMESAEKIFEEWESR 357
VI YA D L +++R + R Y ++++L++ + + AE F +E+
Sbjct: 84 VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
L +++ N LI CR+ KA+ L+ +G P+V ++ G L N+ ++ G
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSY-----GTLINSLAKNG 198
Query: 418 V--EAMKKALVLLEAGTRWKPSKECLAACL-GYYKKERDIEGADYFIKLLTGKEI 469
+A+K + E G P C + G++KK + ++ + +LL G +
Sbjct: 199 YMSDALKLFDEMPERGV--TPDVACYNILIDGFFKKGDILNASEIWERLLKGPSV 251
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 81/201 (40%), Gaps = 18/201 (8%)
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
RLD +A G+ + C P P V A++N + A E A M +G
Sbjct: 444 RLDEVA---GVLDQMTKHGCKPN----PHVCNAVINGFVRASKLEDALRFFGNMVSKGCF 496
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI 244
+ YN+++N + + + +L+ EM KG + T+S+L++ G+ +D
Sbjct: 497 PTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMN---GLCQGKKLDMA 553
Query: 245 VAM--MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV------LMMHNKFSRA 296
+ + ++G D ++ G +G + AL + + + L+ HN
Sbjct: 554 LNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEG 613
Query: 297 YDFVITQYAACGNKDDVLRVW 317
+ V A D +L+ W
Sbjct: 614 FYKVRDFERASKIWDHILQSW 634
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 174/413 (42%), Gaps = 48/413 (11%)
Query: 64 NDSMVPLLDQW-VEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
+D + LLD+ + G LD+ ++ R+ ALQ+ + ++ V T
Sbjct: 69 HDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAEL-RRQGVVPTIVTY 127
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKL----PSVYIALLNAYACAKSA--EKAEIIMQ 176
+ LD+ + + ++ + E+++ P + A AC + ++A +
Sbjct: 128 NVVLDVYGR---MGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFE 184
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
++ RG V + YN+++ V+ + GNY + ++ EME+ G D T++ L A A
Sbjct: 185 DLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAG 244
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL--------------- 281
E K + M + +G++ + Y T + Y G D+ALA+
Sbjct: 245 FFEEAAKCLDTMTS-KGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTY 303
Query: 282 -----------RKSEVLMMHNKFSRA---YDFVI--TQYAACGNK---DDVLRVWKRYKQ 322
R + +L M + SR+ + V T A CG + D V RV K
Sbjct: 304 NLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKS 363
Query: 323 -NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
+++ Y +IS+ + A K+++E S + N L++ R+G
Sbjct: 364 CGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWST 423
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRW 434
A++++ K G +PN +++ L+ Y + + G+E+++K + + W
Sbjct: 424 AQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNA-AGIESIEKEVYVGTIFPSW 475
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 19/264 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++AY S A + +M G YN+++NV + G++ S++ +M
Sbjct: 372 TYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKM 431
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL-DWTVYATAASGYVKAG 272
+ G + ++S+LL A + GI+ I E G + W + T V A
Sbjct: 432 LKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEK--EVYVGTIFPSWVILRT----LVIAN 485
Query: 273 LSDKALAVLRKS--EVLMMHNKFSRA-YDFVITQYAACGNKDDVLRVWKRYKQ-----NL 324
+ L + K+ EV K ++ ++ YA G ++ KQ +L
Sbjct: 486 FKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDL 545
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
YN ++ K + AEKI ++ +S + D+ N +I+ +C++GL+ +A+
Sbjct: 546 ITYN----SLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQR 601
Query: 385 LIYKAQLRGTEPNVRTWYLMATGY 408
++ + G P V T++ + GY
Sbjct: 602 ILSEMIADGMAPCVVTYHTLVGGY 625
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 133/310 (42%), Gaps = 17/310 (5%)
Query: 111 KKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLK---LPSV--YIALLNAYACA 165
KK N V++P + + ++ A +N V E + P+V Y L+ +
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGA---YNIVKEMIASGCRPNVVIYTTLIKTFLQN 465
Query: 166 KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF 225
A ++++M+++G+ YNS++ + + S + EM E G+ + +T+
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Query: 226 SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
+S AS+ DK V M + GV+ + + + Y K G +A + R
Sbjct: 526 GAFISGYIEASEFASADKYVKEMR-ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRS-- 582
Query: 286 VLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKF 341
M+ ++ Y ++ DD +++ + + + Y +I+ K
Sbjct: 583 --MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 342 DGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
M+ A IF+E L ++ I N L+ +CR G + KA+ L+ + ++G PN T+
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Query: 402 YLMATGYLQN 411
+ GY ++
Sbjct: 701 CTIIDGYCKS 710
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 21/283 (7%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N ++ + +KA I +M + GL I YN ++ + ++G +K L+ EM
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
KG+ + T+ ++ + D ++ M+ +G+V D VY T G +
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL-KGLVPDSFVYTTLVDGCCRLNDV 748
Query: 275 DKALAVL--RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLR-----VWKRY-KQNLKV 326
++A+ + K F+ ++V ++ K +VL + R+ K N
Sbjct: 749 ERAITIFGTNKKGCASSTAPFNALINWVF-KFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
YN +I L K +E+A+++F + ++ NL + L++ Y + G + +
Sbjct: 808 YN----IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE 429
+A G EP+ + ++ +L+ + KALVL++
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMT-------TKALVLVD 899
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 113/257 (43%), Gaps = 5/257 (1%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
EKA+ + M GL+ + Y S++ Y + N ++ L+ EM+++ I YT+ +
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVL 287
+ ++ D +G IV M A G + +Y T +++ A+ VL++ E
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIAS-GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 288 MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMES 346
+ + F Y+ +I + D+ +N LK Y IS ++ S
Sbjct: 483 IAPDIF--CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
A+K +E + + + LI+ YC++G + +A + +G + +T+ ++
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 407 GYLQNNQSEKGVEAMKK 423
G +N++ + E ++
Sbjct: 601 GLFKNDKVDDAEEIFRE 617
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 123/295 (41%), Gaps = 30/295 (10%)
Query: 149 LKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
+ L Y L++ K E A+ ++ +M G+ Y+ +++ + N
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGI-DKIVAMMEA--DRGVVLDWTVYATAA 265
L+HEM GI+ Y + C EG+ +K A+ + G++ YA+
Sbjct: 334 LVHEMVSHGINIKPYMY----DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 266 SGY-----VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
GY V+ G + L ++K +++ Y V+ + G+ D + K
Sbjct: 390 EGYCREKNVRQGY--ELLVEMKKRNIVIS----PYTYGTVVKGMCSSGDLDGAYNIVKEM 443
Query: 321 -----KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
+ N+ +Y +I + L+ A ++ +E + + + DI N LI +
Sbjct: 444 IASGCRPNVVIYTT----LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ---SEKGVEAMKKALVL 427
+ +A + + + G +PN T+ +GY++ ++ ++K V+ M++ VL
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 7/249 (2%)
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL-SACAAAS 236
M G V + YN+++N + G YK L+ ME KGI+ D T+++L+ C
Sbjct: 1 MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR- 295
+G + M + R + + Y T +G +K A V +E+LM++ +R
Sbjct: 61 SAKGYLLLKKMRK--RMIAPNEFTYNTLINGLMKERKIGGATRVF--NEMLMLNLSPNRV 116
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
Y+ +I + CGN + LR+ + + L+ Y ++S L K + A+ + E
Sbjct: 117 TYNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERI 176
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
+ R +ID C+ GLL ++ L+ G P++ T+ ++ G+ + +
Sbjct: 177 RMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKI 236
Query: 415 EKGVEAMKK 423
+ E + K
Sbjct: 237 KNAKEVICK 245
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 135/360 (37%), Gaps = 31/360 (8%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKS---NFVL---- 117
D + LLD ++G D+ ++I F + +A ++ M K N+V+
Sbjct: 202 DESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATL 261
Query: 118 -----TPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAE 172
D+ A + YF C L+++ A +AE
Sbjct: 262 IYNSCKKGDITEAFRNYATMTRTGHDVDYFICN-----------VLISSLCRAGRVAEAE 310
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
M+ M L +I ++ ++N Y G+ K S+ EM + G +T+ LL
Sbjct: 311 DFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGL 370
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
+ K++ + V D +Y T S K G A+A+ + ++ N
Sbjct: 371 CKGGNLREAKKLLYKLHHIPAAV-DTNIYNTILSETCKRGKLSDAVALFGE---MVQFNV 426
Query: 293 F--SRAYDFVITQYAACGNKDDVLRVWKRY--KQNLKVYNRGYICVISSLLKFDGMESAE 348
S Y ++ + G L +++ + L Y + L K +A
Sbjct: 427 LPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAAS 486
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
I+EE E + + D N ++D Y R G + K E L K Q P++ T+ ++ GY
Sbjct: 487 YIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGY 546
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 106/263 (40%), Gaps = 17/263 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+N + A + +M L + YN +++ + GN+++ L+ M
Sbjct: 82 TYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQALRLLDVM 141
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR--GVVLDWTVYATAASGYVKA 271
E KG+ D+ + LLS + + D ++ME R G+V+ + Y G K
Sbjct: 142 EAKGLRPDEVNYGALLSGLSKLAK---FDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKH 198
Query: 272 GLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACG---NKDDVLRVWKRYKQNLK 325
GL D++L +L +M + S + +I + G N +V + K +K L
Sbjct: 199 GLLDESLQLLD----MMFKDGASPDIITFSVLINGFCKAGKIKNAKEV--ICKMFKAGLA 252
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
Y +I + K + A + + D I N LI + CR G + +AE
Sbjct: 253 PNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDF 312
Query: 386 IYKAQLRGTEPNVRTWYLMATGY 408
+ PN T+ + GY
Sbjct: 313 MRHMSTIDLAPNSITFDCIINGY 335
>gi|168011113|ref|XP_001758248.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690704|gb|EDQ77070.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 658
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 16/285 (5%)
Query: 124 IRLDLIAKV-QGIEQAASYFNCVPEKLKLPS-VYIALLNAYACAKSAEKAEIIMQQMRDR 181
+ +D+I++V IEQ E L++ + +Y ++NAY A +KA M M+
Sbjct: 163 VGVDVISRVCANIEQ---------EGLEMDTKLYNDVINAYCRAGDPDKAFQYMGLMQAC 213
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
LV Y+S++ ++ EM+ K + T + LLSA S E +
Sbjct: 214 DLVPDVRSYSSLIETLVVVRRLDDAEAAYAEMKSKSYKINLRTLNALLSAYTRKSLLEQV 273
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL-MMHNKFSRAYDFV 300
+K++ E D G+ L Y Y +AG D+A A +V + N F Y +
Sbjct: 274 EKLMQDAE-DAGLKLSTFSYGLLIDAYSRAGRLDQAKAAFHNMKVENVPANAF--IYSRL 330
Query: 301 ITQYAACGNKDDVLRVWK-RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
+ Y D +R+ K Y N+K + +I + KF + A + F + +
Sbjct: 331 MVAYRNARQWDGTIRLLKDMYASNIKPNQFIFNILIDTYGKFGRLPQAMRTFAQMDKEGF 390
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
D+ N LI+A+CR GL+ +A L+ + Q R P++ T+ ++
Sbjct: 391 KPDVVTWNSLIEAHCRAGLITEALDLLKQMQERECVPSLHTYNII 435
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 110/260 (42%), Gaps = 12/260 (4%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
E+A ++ Q++ G+ + YN+++ + + LM++M G D ++++
Sbjct: 95 EEAMLLFDQLKQLGVSPGPMAYNAIVGTCAREDRLETALELMNQMRGSGFQPDNVNYTLV 154
Query: 229 LSACAAASDG-EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
ACA G + I ++ A +E + G+ +D +Y + Y +AG DKA + +
Sbjct: 155 FQACAKKRVGVDVISRVCANIEQE-GLEMDTKLYNDVINAYCRAGDPDKAFQYMGLMQAC 213
Query: 288 MMHNKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVYNRGYICVISSLLKFD 342
+ R+Y +I DD + K YK NL+ N ++S+ +
Sbjct: 214 DLVPDV-RSYSSLIETLVVVRRLDDAEAAYAEMKSKSYKINLRTLN----ALLSAYTRKS 268
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
+E EK+ ++ E L LIDAY R G L +A+ + ++ N +
Sbjct: 269 LLEQVEKLMQDAEDAGLKLSTFSYGLLIDAYSRAGRLDQAKAAFHNMKVENVPANAFIYS 328
Query: 403 LMATGYLQNNQSEKGVEAMK 422
+ Y Q + + +K
Sbjct: 329 RLMVAYRNARQWDGTIRLLK 348
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I +D K + QA F + ++ P V + +L+ A+ A +A +++QM++R
Sbjct: 364 ILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEAHCRAGLITEALDLLKQMQER 423
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
V YN ++N +K++ L+ EM KG+D + T++ L+ + +
Sbjct: 424 ECVPSLHTYNIILNALGWHNRWKEMALLLDEMRFKGLDPNVVTYTTLVDSYGTSKRYREA 483
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
+ + M++ +G+ +VY A+ Y K GL ++A+ V + E
Sbjct: 484 SEYLKQMKS-QGLQPSTSVYCALANSYAKRGLCEQAMEVFKSME 526
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 114/274 (41%), Gaps = 17/274 (6%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
ALL+AY E+ E +MQ D GL T Y +++ Y + G + + H M+ +
Sbjct: 259 ALLSAYTRKSLLEQVEKLMQDAEDAGLKLSTFSYGLLIDAYSRAGRLDQAKAAFHNMKVE 318
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
+ + + +S L+ A A +G +++ M A + + ++ Y K G +
Sbjct: 319 NVPANAFIYSRLMVAYRNARQWDGTIRLLKDMYAS-NIKPNQFIFNILIDTYGKFGRLPQ 377
Query: 277 ALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYN 328
A+ + M F ++ +I + G + L + K+ ++ +L YN
Sbjct: 378 AMRTFAQ----MDKEGFKPDVVTWNSLIEAHCRAGLITEALDLLKQMQERECVPSLHTYN 433
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
++++L + + + +E + L ++ L+D+Y +A + +
Sbjct: 434 ----IILNALGWHNRWKEMALLLDEMRFKGLDPNVVTYTTLVDSYGTSKRYREASEYLKQ 489
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ +G +P+ + +A Y + E+ +E K
Sbjct: 490 MKSQGLQPSTSVYCALANSYAKRGLCEQAMEVFK 523
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 26/177 (14%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y L+++Y +K +A ++QM+ +GL T Y ++ N Y + G ++ +
Sbjct: 462 PNVVTYTTLVDSYGTSKRYREASEYLKQMKSQGLQPSTSVYCALANSYAKRGLCEQAMEV 521
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
ME+ G++ + ++L++A A E ++E G+ D Y T
Sbjct: 522 FKSMEKDGVELNLSMLNLLINAFGVAGKYVEAFSVFDYILEV--GMSPDVVTYTTLMKAL 579
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKD---DVLRVWKRYKQ 322
+KA D+ V Y+ ++ A C D D+LR +R+KQ
Sbjct: 580 IKAEQLDQVPDV----------------YEQMVR--AGCTPDDMAKDMLRSAQRFKQ 618
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 125/303 (41%), Gaps = 43/303 (14%)
Query: 162 YACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCD 221
YA A + MR RG+ + S+++ Y + + + S + EM+ +GI+
Sbjct: 279 YAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELT 338
Query: 222 KYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL 281
T+SI+++ A +D + D + +A G L+ +Y+ + ++G D+A ++
Sbjct: 339 IVTYSIIIAGFAKINDAQSADNLFKEAKAKLGD-LNGIIYSNIIHAHCQSGNMDRAEELV 397
Query: 282 RKSEV-----------LMMHN------------KFSR-----------AYDFVITQYAAC 307
R+ E MMH F R +Y +I Y
Sbjct: 398 REMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKI 457
Query: 308 GNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
G + + K + +K N+ Y +IS + +A IFEE L D I
Sbjct: 458 GKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIY 517
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
N LI+A+C+ G + +A ++ K Q +P+ R + + G+ MK+AL
Sbjct: 518 NLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGD-------MKRALN 570
Query: 427 LLE 429
+L+
Sbjct: 571 ILD 573
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
Query: 135 IEQAASYFNCVPEK-LKLPSVYIALLNAYACAKSA--EKAEIIMQQMRDRGLVKKTIDYN 191
I +A YF + E LKL VYI AC KS + A + ++M + + + T YN
Sbjct: 635 IGKAFEYFTKIKEGGLKL-DVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYN 693
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
+++ + + G+ + LM +M+E G+ + +T++ ++AC A D + K++ M AD
Sbjct: 694 ILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEM-AD 752
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKAL 278
G+ + Y T G+ KA L D+AL
Sbjct: 753 VGLKPNLKTYTTLIKGWAKASLPDRAL 779
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 107/272 (39%), Gaps = 40/272 (14%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y ++++ Y + +K I+ +++++ I Y ++N+Y + G K ++ EM
Sbjct: 411 AYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKIGKVTKAIAISKEM 470
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E GI + T+S+L+S D I M +K+GL
Sbjct: 471 ESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEM--------------------LKSGL 510
Query: 274 -SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGY 331
D+A+ Y+ +I + GN D +R+ ++ K+ ++ NR +
Sbjct: 511 QPDRAI------------------YNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAF 552
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I M+ A I + + N LI ++ + +A +++ K +
Sbjct: 553 RPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSI 612
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G PN T+ ++ GY N K E K
Sbjct: 613 AGITPNEHTYTIIMRGYAANGDIGKAFEYFTK 644
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 107/249 (42%), Gaps = 3/249 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++ + A I ++M GL YN ++ + + GN + ++ +M
Sbjct: 481 TYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKM 540
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+++ + F ++ A A D + I+ +M G Y G +K
Sbjct: 541 QKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRS-GCAPTVMTYNALIHGLIKKNQ 599
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYI 332
++A++VL K + + Y ++ YAA G+ + + K+ LK+ Y
Sbjct: 600 VERAVSVLNKMSIAGI-TPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYE 658
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
++ + K M+SA + E ++ + + + N LID + RRG + +A L+ + +
Sbjct: 659 TLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKED 718
Query: 393 GTEPNVRTW 401
G PN+ T+
Sbjct: 719 GVPPNIHTY 727
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 137/346 (39%), Gaps = 47/346 (13%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
+ ++ ++ G D ++I+ F A++I M K+ + P++ A R ++
Sbjct: 501 IFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKER---MQPSNRAFRPIIE 557
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
A +++A + + + P+V Y AL++ E+A ++ +M G+
Sbjct: 558 GFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITP 617
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
Y +M Y G+ K +++E G+ D Y + LL AC
Sbjct: 618 NEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRAC------------- 664
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQY 304
K+G ALAV R+ S + N F Y+ +I +
Sbjct: 665 -----------------------CKSGRMQSALAVTREMSTQKIARNTF--VYNILIDGW 699
Query: 305 AACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
A G+ + + K+ K++ N Y I++ K M+ A+K+ EE L ++
Sbjct: 700 ARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNL 759
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
+ LI + + L +A + +L G +P+ ++ + T L
Sbjct: 760 KTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLVTSLL 805
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/419 (19%), Positives = 173/419 (41%), Gaps = 61/419 (14%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV-- 122
D+ + L+D +G + ++K ++RF A ++ M + S DV
Sbjct: 209 DAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCS----VAPDVRS 264
Query: 123 -AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMR 179
I + +V +E+A ++ + ++ P V + L+ ++ + A +++M+
Sbjct: 265 FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMK 324
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
GLV + Y ++ + + G+ + + EM G D T++ LL+
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLL 384
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
++++ M+ +RGV D + T GY + G +KAL + +D
Sbjct: 385 DAEELLNEMK-ERGVTPDLCTFTTLIHGYCRDGNFEKALQL----------------FDT 427
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
++ Q R + ++ YN +I + + + A +++++ +R +
Sbjct: 428 LLHQ---------------RLRPDVVAYNS----LIDGMCRKGDLAKANELWDDMHAREI 468
Query: 360 CHDIRIPNH-----LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
PNH LID++C +G + +A + + +G PN+ T+ + GY ++
Sbjct: 469 -----FPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNV 523
Query: 415 EKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISAD 473
+KG + ++K + P + Y KE ++ GA ++ KE++ D
Sbjct: 524 KKGQQFLQKMM-----QDNILPDLITFNTLIHGYIKEENMHGAFNVFNIME-KEMVQPD 576
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/265 (19%), Positives = 115/265 (43%), Gaps = 7/265 (2%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
++++Y + +KA+ ++ +M R + + +N +++ ++ G+ +L+ M KG
Sbjct: 163 MVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKG 222
Query: 218 IDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
+ TF S+L C + + AM + V D + G+ + G ++
Sbjct: 223 LKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCS--VAPDVRSFNILIGGFCRVGEVEE 280
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG--YICV 334
A+ ++ + + ++ +I ++ G D + R + L + G Y V
Sbjct: 281 AMKFYKEMQQRGVTPDVV-SFSCLIGLFSTRGKMDHAA-AYLREMKGLGLVPDGVIYTMV 338
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I + M A ++ +E D+ N L++ C++ L AE L+ + + RG
Sbjct: 339 IGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGV 398
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVE 419
P++ T+ + GY ++ EK ++
Sbjct: 399 TPDLCTFTTLIHGYCRDGNFEKALQ 423
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 82/162 (50%), Gaps = 7/162 (4%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+E+A + + + K LP++ Y +++ Y + + +K + +Q+M ++ I +N+
Sbjct: 488 VEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNT 547
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+++ Y + N ++ + ME++ + D T++++++ + + E ++ M A
Sbjct: 548 LIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGAS- 606
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
G+ D Y + +G+V AG S +A + + MMH F+
Sbjct: 607 GIEPDRYTYMSLINGHVTAGNSKEAFQLHDE----MMHRGFA 644
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 174/413 (42%), Gaps = 48/413 (11%)
Query: 64 NDSMVPLLDQW-VEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV 122
+D + LLD+ + G LD+ ++ R+ ALQ+ + ++ V T
Sbjct: 160 HDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAEL-RRQGVVPTIVTY 218
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKL----PSVYIALLNAYACAKSA--EKAEIIMQ 176
+ LD+ + + ++ + E+++ P + A AC + ++A +
Sbjct: 219 NVVLDVYGR---MGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFE 275
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
++ RG V + YN+++ V+ + GNY + ++ EME+ G D T++ L A A
Sbjct: 276 DLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAG 335
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL--------------- 281
E K + M + +G++ + Y T + Y G D+ALA+
Sbjct: 336 FFEEAAKCLDTMTS-KGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTY 394
Query: 282 -----------RKSEVLMMHNKFSRA---YDFVI--TQYAACGNK---DDVLRVWKRYKQ 322
R + +L M + SR+ + V T A CG + D V RV K
Sbjct: 395 NLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKS 454
Query: 323 -NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
+++ Y +IS+ + A K+++E S + N L++ R+G
Sbjct: 455 CGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWST 514
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRW 434
A++++ K G +PN +++ L+ Y + + G+E+++K + + W
Sbjct: 515 AQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNA-AGIESIEKEVYVGTIFPSW 566
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 19/264 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++AY S A + +M G YN+++NV + G++ S++ +M
Sbjct: 463 TYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKM 522
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL-DWTVYATAASGYVKAG 272
+ G + ++S+LL A + GI+ I E G + W + T V A
Sbjct: 523 LKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEK--EVYVGTIFPSWVILRT----LVIAN 576
Query: 273 LSDKALAVLRKS--EVLMMHNKFSRA-YDFVITQYAACGNKDDVLRVWKRYKQ-----NL 324
+ L + K+ EV K ++ ++ YA G ++ KQ +L
Sbjct: 577 FKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDL 636
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
YN ++ K + AEKI ++ +S + D+ N +I+ +C++GL+ +A+
Sbjct: 637 ITYN----SLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQR 692
Query: 385 LIYKAQLRGTEPNVRTWYLMATGY 408
++ + G P V T++ + GY
Sbjct: 693 ILSEMIADGMAPCVVTYHTLVGGY 716
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 151/369 (40%), Gaps = 48/369 (13%)
Query: 100 SHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIA 157
S A+Q + + SNF + LD + ++++ + E P V Y
Sbjct: 170 SDAIQ-CFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNI 228
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
L+N + S A++I ++R RGL T+ +N+++N ++ N + L MEE
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR 288
Query: 218 IDCDKYTFSILLSA-C---------------------------AAASDGEG----IDKIV 245
I D +T+S+L+ C A DG+ ID +
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAM 348
Query: 246 AMMEA--DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVIT 302
GV D +Y T +G K G +KA ++ E+ M+ K + Y +I
Sbjct: 349 NTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLV--DEMRMVGMKPDKITYTTLID 406
Query: 303 QYAACGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
Y G+ + + + K ++ + + N + +IS + + AE+ E +
Sbjct: 407 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKP 466
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
D +ID YC++G + L+ + Q+ G +P V T+ ++ G + Q M
Sbjct: 467 DDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQ-------M 519
Query: 422 KKALVLLEA 430
K A +LLEA
Sbjct: 520 KNANMLLEA 528
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y +++ Y + + ++++M+ G I YN +MN + G K + L+
Sbjct: 469 ATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEA 528
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
M G+ D T++ILL E + K + ++G+++D+ Y + S Y K+
Sbjct: 529 MLNLGVTPDDITYNILLEGHCKNGKAEDLLK----LRNEKGLIVDYAYYTSLVSEYNKS 583
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 3/256 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ++ EKA ++ ++M G + + YN+++N Y GN L+ M+
Sbjct: 411 YNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK 470
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
E G + D++T++ L+S + E M + G+ + Y G+ K G
Sbjct: 471 ENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM-VECGLNPNPVSYTALIDGHSKDGKV 529
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-KRYKQNLKVYNRGYIC 333
D AL++L++ E M N +Y+ VI + + ++ K +Q L Y
Sbjct: 530 DIALSLLKRMEE-MGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTT 588
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+I L + + A KIF + E R ++ + LI C+ G +AE L+ + + +G
Sbjct: 589 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG 648
Query: 394 TEPNVRTWYLMATGYL 409
P+ T+ + G++
Sbjct: 649 LAPDEVTFTSLIDGFV 664
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 115/261 (44%), Gaps = 15/261 (5%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +L+ + ++ + A + +M G ++ Y++++N G + ++ EM
Sbjct: 236 YTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI 295
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
EKGI+ YT+++ ++A A E ++VA M+ RG + Y SG + G
Sbjct: 296 EKGIEPTVYTYTLPITALCAIEHEEEAIELVARMK-KRGCRPNVQTYTALISGLSRLGKL 354
Query: 275 DKALAVLRK--SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-----QNLKVY 327
+ A+ + K E L+ + + Y+ +I + G L+++ + N + Y
Sbjct: 355 EVAIGLYHKMLKEGLVPN---TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTY 411
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
N +I L +E A +FE+ + N LI+ Y +G ++ A L+
Sbjct: 412 NE----IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLD 467
Query: 388 KAQLRGTEPNVRTWYLMATGY 408
+ G EP+ T+ + +G+
Sbjct: 468 LMKENGCEPDEWTYNELVSGF 488
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 123/303 (40%), Gaps = 12/303 (3%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+AK + +E A + + + PS+ + L+N + +AE+I+ Q+ L
Sbjct: 173 LAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPD 232
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIV 245
Y S++ + + N + M ++G D + T+S L++ C E +D +
Sbjct: 233 VFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLE 292
Query: 246 AMMEAD-RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
M+E V +T+ TA + + +A ++K + Y +I+
Sbjct: 293 EMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGC----RPNVQTYTALISGL 348
Query: 305 AACGNKDDVLRVW-KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
+ G + + ++ K K+ L Y +I+ L +A KIF E +
Sbjct: 349 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 408
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN---NQSEKGVEA 420
+ N +I C G + KA L K G P V T+ + GYL N + + ++
Sbjct: 409 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 468
Query: 421 MKK 423
MK+
Sbjct: 469 MKE 471
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 77/171 (45%), Gaps = 7/171 (4%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D + LL + E G ++E +I RFS A +I M ++ L P +
Sbjct: 530 DIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG---LLPNVITY 586
Query: 125 R--LDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRD 180
+D + + + A F+ + ++ LP++Y +L+ A++AEI++++M
Sbjct: 587 TTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMER 646
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
+GL + + S+++ + G L+ M + G + T+S+LL
Sbjct: 647 KGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKG 697
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 131/314 (41%), Gaps = 23/314 (7%)
Query: 124 IRLDLIAKVQGIEQAASYF------NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQ 177
I +D + K + +A + F C P+ + Y +L++ Y E+ E ++ +
Sbjct: 205 IVIDFLCKEGELVEARALFVRMKAMGCSPDVV----TYNSLIDGYGKCGDLEEVEQLVSE 260
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
MR G + YN+++N + + G +K S EM+ +G+ + TFS + A
Sbjct: 261 MRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGL 320
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF-SRA 296
+ K+ A M RG++ + Y + G KAG D A+ +L + M+H
Sbjct: 321 VQEAMKLFAQMRV-RGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDE----MVHQGLVPNV 375
Query: 297 YDFVITQYAAC-----GNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
+ + C D+VL + +R +K Y +I + E A +
Sbjct: 376 VTYTVMVDGLCKEGKVAEADNVLSLMER--GGVKANELLYTTLIHGHFMNNNSERALDLL 433
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
+ +++ + D+ + LI C+ + +A++L++K G PN + + +
Sbjct: 434 NQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKA 493
Query: 412 NQSEKGVEAMKKAL 425
+ + V + K L
Sbjct: 494 GKESEAVALLHKIL 507
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/343 (19%), Positives = 141/343 (41%), Gaps = 4/343 (1%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
L+ + + G D+ +I F + R A M K+ V + +D
Sbjct: 257 LVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEM-KRQGVVANVVTFSTFVDAF 315
Query: 130 AKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
K +++A F + + +P+ Y +L++ A + A +++ +M +GLV
Sbjct: 316 CKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNV 375
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
+ Y M++ + G + D+++ ME G+ ++ ++ L+ ++ E ++
Sbjct: 376 VTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQ 435
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC 307
M+ ++G+ LD ++Y T G K D+A ++L K + + + A
Sbjct: 436 MK-NKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAG 494
Query: 308 GNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
+ V + K + Y +I L K + A F + L +++
Sbjct: 495 KESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYT 554
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
LID +C+ G L+KA L+ + +G + + + GY++
Sbjct: 555 ALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMK 597
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 3/165 (1%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K I +A S+FN + E P+V Y AL++ + S KA +M +M D+G+
Sbjct: 522 IDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGM 581
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ Y S+++ Y + N + +L +M E G+ D Y ++ +S + +
Sbjct: 582 SLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARG 641
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM 288
+++ M G+ D TVY Y K G ++A ++ + E ++
Sbjct: 642 VLSEM-IGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMESVL 685
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 6/164 (3%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y AL++ A S +A +MR+ GL Y ++++ + + G+ K L
Sbjct: 513 PNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHL 572
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
M+EM +KG+ DK ++ L+ ++ + + M + G+ LD Y SG+
Sbjct: 573 MNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKM-IESGLQLDLYCYTCFISGFC 631
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVITQYAACGNKDD 312
+ +A VL SE++ + Y+ +I +Y GN ++
Sbjct: 632 NMNMMQEARGVL--SEMIGTGITPDKTVYNCLIRKYQKLGNMEE 673
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 147/360 (40%), Gaps = 47/360 (13%)
Query: 109 MTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAK 166
+ + SNF + LD + ++++ + E P V Y L+N +
Sbjct: 178 LVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEG 237
Query: 167 SAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFS 226
S A++I ++R RGL T+ +N+++N ++ N + L MEE I D +T+S
Sbjct: 238 SIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYS 297
Query: 227 ILLSACAAASDGEGIDKIVAMMEA----------------------------------DR 252
+L+ + +++ M+
Sbjct: 298 VLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTM 357
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL-MMHNKFSRAYDFVITQYAACGNKD 311
GV D +Y T +G K G +KA ++ + +++ M +K + Y +I Y G+ +
Sbjct: 358 GVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKIT--YTTLIDGYCKEGDLE 415
Query: 312 DVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+ + K ++ + + N + +IS + + AE+ E + D +I
Sbjct: 416 SAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVI 475
Query: 371 DAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA 430
D YC++G + L+ + Q+ G +P V T+ ++ G + Q MK A +LLEA
Sbjct: 476 DGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQ-------MKNANMLLEA 528
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y +++ Y + + ++++M+ G I YN +MN + G K + L+
Sbjct: 469 ATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEA 528
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
M G+ D T++ILL E + K + ++G+++D+ Y + S Y K+
Sbjct: 529 MLNLGVTPDDITYNILLEGHCKNGKAEDLLK----LRNEKGLIVDYAYYTSLVSEYNKS 583
>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 638
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 114/251 (45%), Gaps = 15/251 (5%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
L+ A+ +A I++Q + GL +N +++ + + N+ ++ L+H M K
Sbjct: 269 LIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKN 328
Query: 218 IDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG-LSD 275
+ D +T+ +++ C + + A+ DRG D +Y T G+ K G L D
Sbjct: 329 RNPDIFTYQEIINGFCKNWMTLQAFEVFNAL--KDRGYAPDMVMYTTLIHGFCKMGQLED 386
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-----YKQNLKVYNRG 330
+ + + N++S Y+ +I + GN D+ ++++K+ YK+ N
Sbjct: 387 ASKLWFEMIDKGFLPNEYS--YNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNT- 443
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
+I L + A F E +N+ D+ N LI +CR G + ++ L+ + Q
Sbjct: 444 ---LILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQ 500
Query: 391 LRGTEPNVRTW 401
+G +P+ ++
Sbjct: 501 AKGLQPSTSSY 511
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 116/290 (40%), Gaps = 49/290 (16%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y ++N + +A + ++DRG + Y ++++ + + G + L EM
Sbjct: 335 TYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEM 394
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+KG ++Y+++ L+ C + E + M++ SGY +
Sbjct: 395 IDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLD----------------SGYKETT 438
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN-KDDVLRVWKRYKQNLKVYNRGY 331
LS L + L +H + AYDF + C N DV+ YN
Sbjct: 439 LSCNTLIL-----GLCLHGRTDEAYDFF--REMPCKNIVCDVI-----------TYNT-- 478
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I + + + + +E +++ L HLI C+ G + +A+ +
Sbjct: 479 --LIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHN 536
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKG--VEAMKKALVLLEAGTRWKPSKE 439
RG +P V T + +G E+G VE M+ + +L++ KP KE
Sbjct: 537 RGLQPMVCTRDHIISGL-----CEQGYVVEGMEWLITMLKSNL--KPQKE 579
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 11/244 (4%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
I ++M +G+ + YN+M+ + Q G+ + + EM EKG+ + T+S+L+
Sbjct: 455 IWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYF 514
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF 293
D E + M + D+T +G KAG + ++ L+K ++ F
Sbjct: 515 KKGDTEYAFGLYDRMRGENIAPSDFTC-NIIINGLCKAGRTSESQDRLKK----LVQEGF 569
Query: 294 ---SRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEK 349
Y+ +I + G+ + L V+ K + Y +I+ K + M+ A K
Sbjct: 570 IPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALK 629
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY- 408
+ +E +++ + D+ + LID +CR+G + A L+ + Q G PN + M +G+
Sbjct: 630 VMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFR 689
Query: 409 -LQN 411
LQN
Sbjct: 690 KLQN 693
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 138/313 (44%), Gaps = 20/313 (6%)
Query: 120 ADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMR 179
D L +++G A S F C ++N A +++ ++++
Sbjct: 517 GDTEYAFGLYDRMRGENIAPSDFTCN-----------IIINGLCKAGRTSESQDRLKKLV 565
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
G + + YN +++ + + G+ ++ EM + G+ + +T++ L++ +++ +
Sbjct: 566 QEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMD 625
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYD 298
K++ M+ ++G+ LD TVY G+ + G A +L + EV + NK Y
Sbjct: 626 LALKVMDEMK-NKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKV--VYS 682
Query: 299 FVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
+I+ + N + L + KR + + + Y +IS LLK + A +++ E ++
Sbjct: 683 SMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAK 742
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ D+ + LI C +G L A+ ++ + P V + + TG+ + ++
Sbjct: 743 GIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEA 802
Query: 418 V----EAMKKALV 426
E + K LV
Sbjct: 803 FRLHNEMLDKGLV 815
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 153/400 (38%), Gaps = 58/400 (14%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIA--LLNAYACAKSAEKAEIIMQQMRDRGL 183
L+ K + I A FN + EK +P + + L+ +A + +M +G+
Sbjct: 161 LNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGV 220
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG--- 240
+ M+ + G ++ + E + KG++ D +SI++ A D
Sbjct: 221 KGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALG 280
Query: 241 ----------------IDKIVA-------MMEADR--------GVVLDWTVYATAASGYV 269
+++ M+EA + G ++ V T GY
Sbjct: 281 LLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYC 340
Query: 270 KAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ---NLK 325
K G D AL + K +E + N + Y +I GN D ++ + K +
Sbjct: 341 KQGDLDSALELFDKMNENGICPNNVT--YAVIIEWCCKNGNMDKAYEIYNQMKNKDISPT 398
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
V+N + I LK E A K+F+E + + ++ N L+ C+ G + +A ++
Sbjct: 399 VFNVNSL--IRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSI 455
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG----VEAMKKALVLLEAGTRWKPSKECL 441
K +G P+V ++ M G+ Q + VE ++K L KP+
Sbjct: 456 WEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGL---------KPNLITY 506
Query: 442 AACLGYYKKERDIEGADYFIKLLTGKEIISADLQDRLLNN 481
+ + Y K+ D E A + G+ I +D ++ N
Sbjct: 507 SVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIIN 546
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 117/278 (42%), Gaps = 13/278 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ LLN+Y K A + ++ +V N ++ + ++ + ++M
Sbjct: 156 VFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKM 215
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA-DRGVVLDWTVYATAASGYVKAG 272
KG+ D T S+++ A + +G+ + EA ++GV LD Y+ K
Sbjct: 216 ASKGVKGDCATISVMIRA--SMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKP 273
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQY-AACGNKDDVLRVWKRYKQNLKVYNRGY 331
S AL +LR+ M +K ++ + T+ C + +L K + L
Sbjct: 274 DSVAALGLLRE-----MRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMN 328
Query: 332 ICVISSLLKF----DGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
+ V ++L+K ++SA ++F++ +C + +I+ C+ G + KA +
Sbjct: 329 VVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYN 388
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
+ + + P V + GYL+ E+ + +A+
Sbjct: 389 QMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAV 426
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 150/341 (43%), Gaps = 32/341 (9%)
Query: 103 LQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIA----- 157
+Q W K+ NF D+ + LI + + + E ++ P+ I
Sbjct: 79 IQFFKWAGKRRNF---EHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLS 135
Query: 158 -LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
++ AK KA + Q++ R YNSM+ + Q G+++K+ L HEM +
Sbjct: 136 EVVKILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNE 195
Query: 217 GIDC--DKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
G DC D T+S+L+SA + ++ M+A+ G+ +Y T + Y K+G
Sbjct: 196 G-DCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKAN-GLHPTAKIYTTLLAIYFKSG-D 252
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQY-AACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
+KAL ++++ M +K F T+ G V + + LK + +
Sbjct: 253 EKALGLVQE-----MKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVV 307
Query: 334 VISSLLKFDG----MESAEKIFEEWESRNLCHDIRIPNHLIDA-YCRRGLLHKAETLIYK 388
+I++L+ G +E A K+F++ S ++ N +I A + + +A + K
Sbjct: 308 LINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEK 367
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE 429
+ G P+ T+ ++ G+ + N+ E KAL+LLE
Sbjct: 368 MKANGVTPSSFTYSILIDGFCKTNRVE-------KALLLLE 401
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 112/278 (40%), Gaps = 45/278 (16%)
Query: 126 LDLIAKVQGIEQAASYFN------CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMR 179
+++ K +E A F+ C P + +V AL + A A +A ++M+
Sbjct: 313 INIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKA---PASEAASWFEKMK 369
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
G+ + Y+ +++ + +T +K L+ EM+EKG + L++A A E
Sbjct: 370 ANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYE 429
Query: 240 GID---------------KIVAMMEADRG-----------------VVLDWTVYATAA-- 265
+ +I A+M + G + + VYA A
Sbjct: 430 AANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALM 489
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL- 324
SG V+AG+ ++A + LR E + +++ ++ A G + ++ + K +L
Sbjct: 490 SGLVRAGMIEEAFSALRTMEENGCTPDLN-SHNIILNGLARTGRPEQATEMFMKMKDSLI 548
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
K Y ++ SL + E A K+ E SR +D
Sbjct: 549 KPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYD 586
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
IE+A S + E P + + +LN A E+A + +M+D + + YN+
Sbjct: 498 IEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNT 557
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
++ ++G +++ LM EM +G + D T+S +L A
Sbjct: 558 ILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEA 596
>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
Length = 581
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 121/272 (44%), Gaps = 15/272 (5%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
ALL A A A+ A + +M GL T YN+M++V + G+ + ++++ M+
Sbjct: 148 ALLTALARARMTATARRVFDEMARAGLAATTHVYNAMLHVCLKAGDAAQAEAIVTRMDAA 207
Query: 217 GIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADR-GVVLDWTVYATAASGYVKAGLS 274
G+ D+++++ +++ C G G + + A D+ G+ D + ++ G K G
Sbjct: 208 GVTLDRFSYNTVIALYC---RKGMGYEAMCARDRMDKEGIRPDTVTWNSSIHGLCKEGRV 264
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-----QNLKVYNR 329
+A A L V + Y +I Y GN ++ +++ R + + YN
Sbjct: 265 KEA-AQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYN- 322
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
++ L + M+ ++ E + R + D N LI+AYC+RG + A + K
Sbjct: 323 ---AILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKM 379
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
G + N T+ + G+ + + + EA
Sbjct: 380 MESGLQLNHFTYKALIHGFCKARELDGAKEAF 411
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 112/250 (44%), Gaps = 13/250 (5%)
Query: 135 IEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+++AA F + P Y L++ Y A + E+A + +M G++ YN+
Sbjct: 264 VKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNA 323
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI-VAMMEAD 251
++ + GN K++ L+HEM+ + + D T + L++A D K+ MME+
Sbjct: 324 ILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMES- 382
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY---DFVITQYAACG 308
G+ L+ Y G+ KA D A +++ M+ FS Y +++ +
Sbjct: 383 -GLQLNHFTYKALIHGFCKARELDGA----KEAFFQMVDAGFSPNYSVFSWLVDGFCKKN 437
Query: 309 NKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
N D VL + K+ L Y +I L + ++ A+++F++ +S+ L D +
Sbjct: 438 NADAVLAIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSKGLVGDSLVYA 497
Query: 368 HLIDAYCRRG 377
L Y +G
Sbjct: 498 TLAYTYLTKG 507
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 115/279 (41%), Gaps = 11/279 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY A+L+ A A +AE I+ +M G+ YN+++ +Y + G + M
Sbjct: 180 VYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAMCARDRM 239
Query: 214 EEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+++GI D T+ S + C E M+ A D Y T GY +AG
Sbjct: 240 DKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQ--ATPDNVTYTTLIDGYCRAG 297
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYI 332
++A+ + + E M + Y+ ++ + GN +V R+ KV
Sbjct: 298 NVEEAVKLRGRMEAAGMLPGVA-TYNAILRKLCEDGNMKEVHRLLHEMDGR-KVQADHVT 355
Query: 333 C--VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
C +I++ K M SA K+ ++ L + LI +C+ L A+ ++
Sbjct: 356 CNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMV 415
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGV----EAMKKAL 425
G PN + + G+ + N ++ + E MK+ L
Sbjct: 416 DAGFSPNYSVFSWLVDGFCKKNNADAVLAIPDELMKRGL 454
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 131/306 (42%), Gaps = 20/306 (6%)
Query: 117 LTPADVA-------IRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAE 169
+T +DVA I +D AK+ I +A + + EK P++ Y K +
Sbjct: 506 VTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGK 565
Query: 170 KAEII--MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSI 227
AE + + ++ GLV ++ Y ++MN Y + G+ + ++HEME K I + T+++
Sbjct: 566 LAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTV 625
Query: 228 LLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV 286
++ C E + +++ M A RG+ D Y T + KA KA + +
Sbjct: 626 VVKGLCKEGRLHESV-QLLKYMYA-RGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQ--- 680
Query: 287 LMMHNKFSRA---YDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFD 342
M+ + + Y+ +I GN D R+ + Q++++ Y +I +
Sbjct: 681 -MLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKG 739
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
+++A F + R IR + +I+ C+R L+ A+ G P+
Sbjct: 740 DVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICL 799
Query: 403 LMATGY 408
+M +
Sbjct: 800 VMLNAF 805
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/308 (18%), Positives = 123/308 (39%), Gaps = 40/308 (12%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PSV + AL++ + S + A+ M GL+ YN +++ G+ ++
Sbjct: 268 PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEF 327
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD------------------ 251
++ME G++ D T++IL + G K+V M +
Sbjct: 328 TNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQ 387
Query: 252 ----------------RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR 295
+G+ L Y S K+G D+A+ +L + EV+ +
Sbjct: 388 MGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDL-L 446
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC--VISSLLKFDGMESAEKIFEE 353
Y +I G ++ + +++ ++Y ++C +IS L + + A+ F+
Sbjct: 447 TYSVLIHGLCKRGAVEEAIELYEEMCSK-RIYPNSFVCSAIISGLFEKGAISEAQMYFDS 505
Query: 354 WESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
++ +I + N +ID Y + G + +A + +G P + T+ + G+ + +
Sbjct: 506 VTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGK 565
Query: 414 SEKGVEAM 421
+ V+ +
Sbjct: 566 LAEAVKLL 573
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 119/276 (43%), Gaps = 17/276 (6%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+ + + E++ + ++M +GL + Y +++ ++G + L+HEME
Sbjct: 378 YTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEME 437
Query: 215 EKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
G+ D T+S+L+ C + E I+ M + + + V + SG + G
Sbjct: 438 VIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEM--CSKRIYPNSFVCSAIISGLFEKGA 495
Query: 274 SDKA---LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG 330
+A + KS+V + Y+ +I YA GN + +R YKQ ++
Sbjct: 496 ISEAQMYFDSVTKSDV----AEEIILYNIMIDGYAKLGNIGEAVR---SYKQIIEKGISP 548
Query: 331 YICVISSLL----KFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
I +SL+ K + A K+ + + L L++ YC G +H ++
Sbjct: 549 TIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDML 608
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
++ + + +P T+ ++ G + + + V+ +K
Sbjct: 609 HEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLK 644
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 145/343 (42%), Gaps = 25/343 (7%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
LL + E G D ++K R AL + M KKS +P V +
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGC-SPNVVTYNTVIH 235
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+ + + +A + F+ + ++ +P V Y ++++A A++ +KAE++++QM G
Sbjct: 236 GLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQP 295
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG-----IDCDKYTFSILLSACAAASDGEG 240
+ YN M++ Y +G +K+ + EM +G + C+ Y S+ C E
Sbjct: 296 NKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSL----CKHGKSKEA 351
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAY 297
+ +M A +G + Y+ GY G L + E N R +
Sbjct: 352 AEFFDSM--AAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSME----GNGIVADQRVF 405
Query: 298 DFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWES 356
+ VI Y G D+ + ++ + ++ + + Y VI++ + + A F + +
Sbjct: 406 NIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIA 465
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG-TEPNV 398
L + + + LI +C G L KA+ L+ + RG PN+
Sbjct: 466 MGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNI 508
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 139/339 (41%), Gaps = 24/339 (7%)
Query: 136 EQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
++AA +F+ + K P++ Y LL+ YA + M G+V +N +
Sbjct: 349 KEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIV 408
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADR 252
++ Y + G + + +M+E+G+ D T+ I+++A + + +DK M+
Sbjct: 409 IDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAM-- 466
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA----YDFVITQYAACG 308
G+ + VY + G+ G KA ++ + MM R ++ +I G
Sbjct: 467 GLKPEGIVYHSLIQGFCMHGNLVKAKELVSE----MMSRGIPRPNIVFFNSIINSLCKEG 522
Query: 309 NKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGM----ESAEKIFEEWESRNLCHDIR 364
V+ + + + R + +SL+ G+ E A + + S + D+
Sbjct: 523 R---VVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVV 579
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
N LID YCR G + L + +G +P T+ ++ G + ++ V A K
Sbjct: 580 SYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRT---VGAKKMC 636
Query: 425 LVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKL 463
++E+GT S C G + D E F KL
Sbjct: 637 HEMIESGTTMDIST-CGIILGGLCRNNCDDEAIAMFKKL 674
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 108/258 (41%), Gaps = 7/258 (2%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+ +A F+ V + P V + +L++ Y EKA ++ M G+ + YN+
Sbjct: 524 VVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNT 583
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+++ Y + G L EM KG+ T+ I+L G K+ M +
Sbjct: 584 LIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEM-IES 642
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA-YDFVITQYAACGNKD 311
G +D + G + D+A+A+ +K + M+ KF+ A + +I ++
Sbjct: 643 GTTMDISTCGIILGGLCRNNCDDEAIAMFKK--LGAMNVKFNIAIINTMIDAMYKVRKRE 700
Query: 312 DVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+ ++ V N Y +I +LLK +E A+ +F E R+ N++I
Sbjct: 701 EAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYII 760
Query: 371 DAYCRRGLLHKAETLIYK 388
+G + KA ++K
Sbjct: 761 RVLLEKGEIVKAGNYMFK 778
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 101/237 (42%), Gaps = 21/237 (8%)
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
G + YN++++ ++ G K +L HEM ++G+ D T++ ++ A A +
Sbjct: 222 GCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKA 281
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK--SEVLMMHNKFSRAYDF 299
+ ++ M ++ G + Y GY +G + + R+ S+ LM + +Y
Sbjct: 282 ELVLRQMISN-GFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMS 340
Query: 300 VITQYAACGNKDDVL--RVWKRYKQNLKVYN---RGYI---CVISSLLKFDGMESAEKIF 351
+ ++ + K +K NL Y+ GY C + L +F
Sbjct: 341 SLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDML----------NLF 390
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
E + D R+ N +IDAY +RG++ + + + Q +G P+ T+ ++ +
Sbjct: 391 NSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAF 447
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 93/262 (35%), Gaps = 44/262 (16%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
PS+ +AL N I ++ R R + YN +M+ +T +L
Sbjct: 95 PSLAVALFN-----------RICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFG 143
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
+ G+ D SILL A + + ++ + GV D Y T +
Sbjct: 144 RFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCED 203
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
S +AL +L ++ + C N+ YN
Sbjct: 204 SRSQRALDLLHT----------------MVKKSGGC-------------SPNVVTYNT-- 232
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
VI L + + A +F E + + D+ +IDA C+ + KAE ++ +
Sbjct: 233 --VIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMIS 290
Query: 392 RGTEPNVRTWYLMATGYLQNNQ 413
G +PN T+ M GY + Q
Sbjct: 291 NGFQPNKVTYNCMIHGYSISGQ 312
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 125/286 (43%), Gaps = 13/286 (4%)
Query: 148 KLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
KL P V Y +++ K A + + + + YN++++ + G K
Sbjct: 327 KLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKD 386
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAA 265
L ++M K I D YTFSIL+ + + ++AMM + + D Y++
Sbjct: 387 AIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMM-MKQSIKPDVVTYSSLM 445
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDFVITQYAACGNKDDVLRVWKRYKQ 322
GY +KA ++ M H + ++Y+ +I + D+ ++++K
Sbjct: 446 DGYCLVNEVNKAESIFNT----MSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHH 501
Query: 323 NLKVYNR--GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
+++ Y +I L K + A ++ +E R DI N ++DA C++ +
Sbjct: 502 K-QIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVD 560
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
KA TL+ K + +G P++ T+ ++ G Q+ + E + + LV
Sbjct: 561 KAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLV 606
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/303 (17%), Positives = 135/303 (44%), Gaps = 15/303 (4%)
Query: 132 VQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
V ++ A FN + K +P VY L++ + + ++A+ ++ M + + +
Sbjct: 381 VGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMM 248
Y+S+M+ Y K +S+ + M +G+ + +++I+++ C E + M
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMH 500
Query: 249 EADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYDFVITQY 304
+ + D Y++ G K+G AL ++ + MH + + Y+ ++
Sbjct: 501 H--KQIFPDVITYSSLIDGLCKSGRISYALELVDE-----MHYRGQQPDIITYNSILDAL 553
Query: 305 AACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
+ D + + + K Q ++ Y ++ L + +E A K+FE+ + D+
Sbjct: 554 CKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDV 613
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+I +C +GL +A L+ K + G P+ +T+ ++ + ++++ + +++
Sbjct: 614 YAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLRE 673
Query: 424 ALV 426
++
Sbjct: 674 MIM 676
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 150/362 (41%), Gaps = 18/362 (4%)
Query: 53 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112
L R L +D+M +L + E G D+ ++K K+ A ++ M +
Sbjct: 54 LLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAED 113
Query: 113 SNFVLTPADVAIRLDLIA---KVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKS 167
+ P DV +I K + +A + F + + P+V ++++ ++
Sbjct: 114 GDNC--PPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQA 171
Query: 168 AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSI 227
+KAE ++QQM D ++ YNS+++ Y +G + + ++ EM G + T+++
Sbjct: 172 MDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNM 231
Query: 228 LLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV 286
L+ C + E + +M+++ G D T Y + GY G L + +
Sbjct: 232 LIDCLCKSGFHAEAREIFNSMIQS--GPKPDATTYGSLLHGYATEG----NLVEMNNVKD 285
Query: 287 LMMHNKF-SRAYDFVITQYA--ACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFD 342
LM+ N S + F I YA CG D+ + + +Q Y VI L K
Sbjct: 286 LMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIG 345
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
++ A F + L +I LI + G KAE L Y+ RG P+V +
Sbjct: 346 RLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFT 405
Query: 403 LM 404
M
Sbjct: 406 AM 407
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 131/310 (42%), Gaps = 18/310 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y ++N Y A + + ++M+ G Y +++N + + G +K + + EM
Sbjct: 279 TYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEM 338
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
++ G + D Y ++ L+ A + A +G +I ++ME G D Y + +AGL
Sbjct: 339 QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLME-HMGCEPDRASYNILVDAFGRAGL 397
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYI 332
+A A ++ + M +++ +++ +A GN V + +K L+
Sbjct: 398 HQEAEAAFQELKQQGMRPTM-KSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALN 456
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCH----DIRIPNHLIDAYCRRGLLHKAETLIYK 388
++++ + ++ E++F E + D N L++AY R G L + E
Sbjct: 457 AMLNAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNVLVNAYGRAGYLDRMEAAFRS 516
Query: 389 AQLRGTEPNVRTWYLMATGYLQN---NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACL 445
RG +V TW Y + Q + E M A +AGT +K LAAC
Sbjct: 517 LAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGT----AKVLLAAC- 571
Query: 446 GYYKKERDIE 455
ER +E
Sbjct: 572 ---SDERQVE 578
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/393 (17%), Positives = 157/393 (39%), Gaps = 43/393 (10%)
Query: 92 KFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKL 151
+ RL +++ + + W+ ++S+F + +D + + + +A + + + E +
Sbjct: 145 QLRLNRQWEPIITVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCV 204
Query: 152 PS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+ Y LL AY + +AE ++ +M+ G+ YN+ ++ + +K +
Sbjct: 205 PTEDTYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEV 264
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
M+++ + T+ ++++ A+ ++ M++ G + Y + +
Sbjct: 265 YQRMKKERCRTNTZTYXLMINVYGKANQPMSSLRVFREMKS-VGCKPNICTYTALVNAFA 323
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
+ GL +KA + V + G++ DV Y ++ Y+R
Sbjct: 324 REGLCEKA--------------------EEVFEEMQQAGHEPDVY----AYNALMEAYSR 359
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
+ + A +IF E D N L+DA+ R GL +AE +
Sbjct: 360 AGL-----------PQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQEL 408
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYK 449
+ +G P +++ L+ + + ++ + E M + L ++G R P L A L Y
Sbjct: 409 KQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQ---LHKSGLR--PDTFALNAMLNAYG 463
Query: 450 KERDIEGADYFIKLLTGKEIISADLQDRLLNNI 482
+ ++ + + + SA D N+
Sbjct: 464 RAGRLDDMERLFAAMERGDGASAGAPDTSTYNV 496
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y L+NAY A ++ E + + RGL + + S + Y + Y + + E
Sbjct: 492 STYNVLVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEE 551
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
M + G D T +LL+AC+ E + IV M D
Sbjct: 552 MVDAGCYPDAGTAKVLLAACSDERQVEQVTAIVRSMHKD 590
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 135/289 (46%), Gaps = 14/289 (4%)
Query: 126 LDLIAKVQGIEQ----AASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMR 179
++L+ ++ G E A+ F+ +P + V Y +L+AY+ +A I ++M
Sbjct: 190 IELMVRILGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMN 249
Query: 180 DRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG 238
+ GL + YN M++VY + G ++ K+ L+ EM +G+D D++T S +LSAC
Sbjct: 250 ESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLI 309
Query: 239 EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA-- 296
+ + + ++++ G Y + KAG+ +AL+VL + E +N A
Sbjct: 310 DEAREFFSGLKSE-GYKPGTVTYNALLHVFGKAGIFSEALSVLSEME---ENNCPPDAVT 365
Query: 297 YDFVITQYAACG-NKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
Y+ V+ Y G +++ + + + + Y +I++ + ++ A ++F++
Sbjct: 366 YNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMM 425
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
++ N ++ ++ L + ++ +L G PN TW M
Sbjct: 426 ELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTM 474
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 131/303 (43%), Gaps = 24/303 (7%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
I++A +F+ + + P Y ALL+ + A +A ++ +M + + YN
Sbjct: 309 IDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNE 368
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA-- 250
++ Y + G +++ ++ M KGI + T++ +++A D IDK + M +
Sbjct: 369 VVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGD---IDKALEMFDQMM 425
Query: 251 DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK 310
+ G V + Y K LS++ + +L M N S + T A CG K
Sbjct: 426 ELGCVPNVATYNAVLGMLGKKSLSEEMMKILGH----MKLNGCSPNHITWNTMLAMCGKK 481
Query: 311 ------DDVLRVWKR--YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
+ V R K ++ + +N +IS+ + A K+ EE
Sbjct: 482 GMHKYVNQVFREMKNCGFEPDRDTFN----TLISAYGRCGSNNDAAKMHEEMIKAGFSPC 537
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
I N L++A RRG AE++I + +G P+ ++ LM Y + KG+E ++
Sbjct: 538 INTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNV-KGIEMIE 596
Query: 423 KAL 425
K++
Sbjct: 597 KSI 599
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 119/284 (41%), Gaps = 27/284 (9%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y ALLNA A + AE ++ MR++G Y+ M++ Y + GN K + E
Sbjct: 539 NTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGI-----E 593
Query: 213 MEEKGI-DCDKYTFSILLSACAAAS----DGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
M EK I D D + +LL A+ G+++ ++ G D + + S
Sbjct: 594 MIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQK-HGYKPDLVLCNSMLSI 652
Query: 268 YVKAGLSDKALAVLRK------SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY- 320
+ K + D+A +LR L+ HN Y + C ++VLR+ +
Sbjct: 653 FAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMY----ARGGDCWKAEEVLRMLQTSG 708
Query: 321 -KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
K +L YN VI + M+ +I E S + I N I Y +G+
Sbjct: 709 GKPDLVSYN----TVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMF 764
Query: 380 HKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ +I + PN T+ ++A GY + + ++ ++ + K
Sbjct: 765 TEINDVISYMIVHNCRPNELTYKIVADGYCKARRYDEAIDFVSK 808
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/349 (18%), Positives = 141/349 (40%), Gaps = 41/349 (11%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+ L++AY S A + ++M G YN+++N + G++K +S++ +M
Sbjct: 505 TFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDM 564
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK--- 270
KG + ++S+++ + A + +GI+ I + D + W + T K
Sbjct: 565 RNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSI-YDGDIFPSWMLLRTLVLANFKCRS 623
Query: 271 -AGLSDKALAVLRKS-------------EVLMMHNKFSRAYDFVITQYAACGNKDDVLRV 316
G+ ++A L+K + +N + RA++ + + A G + D++
Sbjct: 624 LTGM-ERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDA-GLQPDLVT- 680
Query: 317 WKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRR 376
+ + +Y RG C AE++ ++ D+ N +I +CR+
Sbjct: 681 ---HNSLMDMYARGGDCW-----------KAEEVLRMLQTSGGKPDLVSYNTVIKGFCRK 726
Query: 377 GLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKP 436
GL+ + ++ + G P + T+ +GY + + + +V +P
Sbjct: 727 GLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIV-----HNCRP 781
Query: 437 SKECLAACL-GYYKKERDIEGADYFIKLLTGKEIISADLQDRLLNNIRN 484
++ GY K R E D+ K+ + RL++ +RN
Sbjct: 782 NELTYKIVADGYCKARRYDEAIDFVSKIKDVDDTFGDQSVRRLVSRVRN 830
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 170/402 (42%), Gaps = 33/402 (8%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK-SNFVLTPADVAIRL-- 126
L + V EG LD+ ++IK L K +H L+ ++ M ++ +N L P ++
Sbjct: 145 LHSKMVNEGIVLDVSTFNVLIKA--LCK--AHQLRPAILMLEEMANHGLKPDEITFTTLM 200
Query: 127 -------DLIAKVQGIEQAASYFNCVPEKLKLPSVYI-ALLNAYACAKSAEKAEIIMQQM 178
DL ++ +Q Y C+ L +V + L+N + E+A + ++
Sbjct: 201 QGFIEEGDLNGALKMKKQMLGY-GCL-----LTNVSVKVLVNGFCKEGRVEEALRFVLEV 254
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG 238
+ G + +NS++N + + GN ++ M EKG D D YT++ L+S +
Sbjct: 255 SEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEF 314
Query: 239 EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYD 298
E +I+ M R + Y T S K + A + R +L+
Sbjct: 315 EKAIEILQQM-ILRECSPNTVTYNTLISALCKENEIEAATDLAR---ILVSKGLLPDVCT 370
Query: 299 F--VITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
F +I N+D + +++ K + K Y +I SL ++ A + +E E
Sbjct: 371 FNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEME 430
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
S + + N LID C+ + AE + + +L G + T+ + G +N + E
Sbjct: 431 SSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVE 490
Query: 416 KGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGA 457
+ + M + +++E KP K + L Y+ + DIE A
Sbjct: 491 EASQLMDQ--MIMEG---LKPDKFTYNSLLTYFCRVGDIEKA 527
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 20/178 (11%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY L++ ++ E AE I QM G+ + ++ YN++++ + ++ LM +M
Sbjct: 440 VYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQM 499
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+G+ DK+T++ LL+ D E IV M A G D Y T G +AG
Sbjct: 500 IMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTM-ASNGCEPDIFTYGTLIGGLCRAGR 558
Query: 274 SDKALAVLR----KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
D A +LR K VL H AY+ VI L + KR K+ ++++
Sbjct: 559 VDVASKLLRSVQMKGIVLTPH-----AYNPVI----------QALFMRKRTKEGMRLF 601
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 109/268 (40%), Gaps = 14/268 (5%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y LNA + E++ +M + G+V +N ++ + + ++ E
Sbjct: 124 NFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEE 183
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M G+ D+ TF+ L+ D G K+ M G +L +G+ K G
Sbjct: 184 MANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQM-LGYGCLLTNVSVKVLVNGFCKEG 242
Query: 273 LSDKALA-VLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLKV 326
++AL VL SE ++ + ++ ++ + GN +D L + K + ++
Sbjct: 243 RVEEALRFVLEVSEEGFSPDQVT--FNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYT 300
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
YN +IS + K E A +I ++ R + N LI A C+ + A L
Sbjct: 301 YNS----LISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLA 356
Query: 387 YKAQLRGTEPNVRTWYLMATGY-LQNNQ 413
+G P+V T+ + G L NQ
Sbjct: 357 RILVSKGLLPDVCTFNTLIQGLCLSKNQ 384
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 119/291 (40%), Gaps = 45/291 (15%)
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
G T YN +N + K ++ L +M +GI D TF++L+ A A +
Sbjct: 118 GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQ---L 174
Query: 242 DKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
+ M+E A+ G+ D + T G+++ G + AL + K ++L Y
Sbjct: 175 RPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKM--KKQML--------GYGC 224
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
++T + +KV G+ K +E A + E
Sbjct: 225 LLTNVS------------------VKVLVNGFC-------KEGRVEEALRFVLEVSEEGF 259
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
D N L++ +CR G ++ A ++ +G +P+V T+ + +G + + EK +E
Sbjct: 260 SPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIE 319
Query: 420 AMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEII 470
+++ ++L E P+ + KE +IE A ++L K ++
Sbjct: 320 ILQQ-MILREC----SPNTVTYNTLISALCKENEIEAATDLARILVSKGLL 365
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 113/295 (38%), Gaps = 45/295 (15%)
Query: 137 QAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
+A +FN + + P + Y +LLNAY ++ KA I +M+ L + YN+++
Sbjct: 381 EAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALI 440
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGV 254
+ Y G ++ EME++GI + + LL+AC S ID ++ E RG+
Sbjct: 441 DAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEM-RGI 499
Query: 255 VLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVL 314
L+ Y A + G DKA+ + +
Sbjct: 500 KLNTVAYNAAIGSCMNVGEYDKAIGLYKSMR----------------------------- 530
Query: 315 RVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
K+ +K + Y +IS K A EE L + + I AY
Sbjct: 531 ------KKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAYS 584
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE 429
++G + +AE+ + G P+V T+ M Y E +KA L E
Sbjct: 585 KQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAY-------NAAENWEKAYALFE 632
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 152/380 (40%), Gaps = 55/380 (14%)
Query: 64 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA 123
+D + LL++WV GR + +IK+ H ++ W+ + N+
Sbjct: 99 DDDVDGLLNRWV--GR-FARKNFPFLIKELTQRGSIEHCNRVFRWLKNQKNYRARNDIYN 155
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
+ + L A+ +QA F + E P V Y A++NA+ A A IM M
Sbjct: 156 MMIRLHARHNRTDQARGLFFEMQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMDDMLRA 215
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
+ YN+++N +GN+K+ ++ +M E G+ D T +I+LSA + G
Sbjct: 216 AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKS---GAQY 272
Query: 242 DKIVAMMEADRGVVL--DWTVYATAASGYVKAGLSDKALAVL-----RKSEVLMMHNKFS 294
K ++ E +G + D T VK DKA+ + +KSE F+
Sbjct: 273 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSECTPDVVTFT 332
Query: 295 RAYDFVITQYAACGNKDDV-----LRVWKRYKQNLKVYN--------------------- 328
+I Y+ CG ++ + + + K N+ YN
Sbjct: 333 S----IIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNE 388
Query: 329 ------RGYICVISSLLKFDGM----ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
R I +SLL G A +IF+ + L ++ N LIDAY GL
Sbjct: 389 IKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGL 448
Query: 379 LHKAETLIYKAQLRGTEPNV 398
L A ++ + + G +PNV
Sbjct: 449 LADAIKILREMEQEGIQPNV 468
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 7/148 (4%)
Query: 133 QG-IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
QG I +A S FN + P V Y A+L+AY A++ EKA + ++M + TI
Sbjct: 586 QGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIA 645
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
++M + + G ++ SL M EK I F ++SAC+ D ++ +E
Sbjct: 646 CAALMRSFNKGGQPGRVLSLAESMREKEIPFSDTIFFEMVSACSILQDWRTAVDMIKYIE 705
Query: 250 ADRGVV----LDWTVYATAASGYVKAGL 273
V+ L+ +++ SG ++ L
Sbjct: 706 PSLPVISSGCLNQFLHSLGKSGKIETML 733
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 126/322 (39%), Gaps = 45/322 (13%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
NC L Y L+N + E+AE +++Q RGL + Y +++ Y + G
Sbjct: 342 NCCEPDL---VTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGE 398
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD------------GEGI--------- 241
Y K + EM G++ D ++ L+ A + GI
Sbjct: 399 YTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNV 458
Query: 242 -------------DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM 288
K++ D+ + D VYAT G+++ G D+A + + L+
Sbjct: 459 LMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQ----LI 514
Query: 289 MHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGM 344
+ Y+ +I ++ G D+ + + ++ V + + +I +K M
Sbjct: 515 IEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNM 574
Query: 345 ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
+ KIF +N ++ LI+ YCR+G AE L + G +P+V T+ ++
Sbjct: 575 NAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSIL 634
Query: 405 ATGYLQNNQSEKGVEAMKKALV 426
+ + + K V + L+
Sbjct: 635 IGSFCKEAKLGKAVSYFELMLI 656
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 133/312 (42%), Gaps = 27/312 (8%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D K +E A F + K +P++ + +L+N + E ++++ +M+DRGL
Sbjct: 250 IDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGL 309
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
YN++++ Y+ G K + EM E + D T++ L++ + + E +K
Sbjct: 310 SVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEK 369
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS-----EVLMMHNKFSRAYD 298
++ RG+ + Y GY K G KA L + EV M+ +Y
Sbjct: 370 LLE-QTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMI------SYG 422
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-------YICVISSLLKFDGMESAEKIF 351
+I G D L + R + NRG Y +++ L K + A+ +
Sbjct: 423 ALIHGLVVAGEVDTALTIRDR------MMNRGILPDANIYNVLMNGLFKKGKLSMAKVML 476
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
E +N+ D + L+D + R G L +A+ L +G +P V + +M G+ ++
Sbjct: 477 TEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKS 536
Query: 412 NQSEKGVEAMKK 423
+ + + K
Sbjct: 537 GMMDNAILCIDK 548
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 108/255 (42%), Gaps = 3/255 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y AL++ A + A I +M +RG++ YN +MN ++ G ++ EM
Sbjct: 421 YGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEML 480
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
++ I D + ++ L+ + + K+ ++ ++G+ Y G+ K+G+
Sbjct: 481 DQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLI-IEKGLDPGVVGYNVMIKGFSKSGMM 539
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK-RYKQNLKVYNRGYIC 333
D A+ + K H + +I Y N + VL+++ KQN K Y
Sbjct: 540 DNAILCIDKMR-RAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTS 598
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+I+ + + AEK+F S L + + LI ++C+ L KA + +
Sbjct: 599 LINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINK 658
Query: 394 TEPNVRTWYLMATGY 408
PN ++ + G+
Sbjct: 659 CTPNDAAFHYLVNGF 673
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 25/158 (15%)
Query: 268 YVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
Y GL DKAL V V+ +HN Y AC + ++L +R + ++Y
Sbjct: 143 YADVGLVDKALEVYHG--VVKLHNSLPSTY--------ACNSLLNLLVKHRRIETAHQLY 192
Query: 328 -------NRGYICV--------ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
N ICV + L +E K+ E + +I N LID
Sbjct: 193 DEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDG 252
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
YC++G + A L K +++G P ++T+ + G+ +
Sbjct: 253 YCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCK 290
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 12/133 (9%)
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYNR---GYIC--VISSLLKFDGMESAEKIFEEW 354
V+ YA G D L V Y +K++N Y C +++ L+K +E+A ++++E
Sbjct: 139 VLCAYADVGLVDKALEV---YHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEM 195
Query: 355 ESRNLCHDIRIPNH----LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
R+ DI + N+ ++ C +G + LI +G PN+ + + GY +
Sbjct: 196 IDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCK 255
Query: 411 NNQSEKGVEAMKK 423
+ E + KK
Sbjct: 256 KGEVESAYKLFKK 268
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 87/227 (38%), Gaps = 36/227 (15%)
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
+G V + YN++++ Y + G + L +++ KG TF L++ E
Sbjct: 237 KGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEA 296
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
ID ++ M+ DRG+ ++ +Y K G KA L++ M N
Sbjct: 297 IDLLLLEMK-DRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKE----MSEN--------- 342
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
C D L YN +I+ +E AEK+ E+ R L
Sbjct: 343 ------CCEPD------------LVTYNT----LINHFCSRGEVEEAEKLLEQTIRRGLA 380
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+ L+ YC++G KA + + G E ++ ++ + G
Sbjct: 381 PNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHG 427
>gi|326511196|dbj|BAJ87612.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 725
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 144/329 (43%), Gaps = 23/329 (6%)
Query: 164 CAKSAEKAEIIMQ-QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDK 222
C + +K +I Q +M RG+ T YN++MNVY + ++ + L EM+EKG+ K
Sbjct: 354 CDEGMKKEALIFQSEMGKRGIPSNTSIYNTIMNVYCKCSQIEEAEGLFAEMKEKGLKPTK 413
Query: 223 YTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA-GLSDKAL-AV 280
T++IL+ A + E ++ ++ M D G + Y S Y + +S+KA A
Sbjct: 414 VTYNILMDAYSRRLQPEVVESLLLEMH-DLGFQPNARSYNCLISAYGRQKKMSEKAEDAF 472
Query: 281 LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLL 339
LR + + S +Y +I YA G + + K + LK Y ++
Sbjct: 473 LRMKKGGIKAT--SSSYTSLICAYAVSGQYEKAHIAYLDMKREGLKPSLETYTALLDI-- 528
Query: 340 KFDGMESAEKIFEEWES----RNLCHDIRIPNHLI-DAYCRRGLLHKAETLIYKAQLRGT 394
F + EK+ E W+S + C R+ H++ D + GL +A +I + G
Sbjct: 529 -FRRAGNTEKLMETWKSMTDEKVGC--TRVTFHMVLDGLAKHGLFVQARDVICEFGKIGL 585
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDI 454
P T+ ++ Y + Q K + +K+ L KP + + Y + RD
Sbjct: 586 PPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTL-----ELKPDSVTYSTLIYAYARVRDF 640
Query: 455 EGADYFIK-LLTGKEIISADLQDRLLNNI 482
A Y+ K ++ ++ A +LLN +
Sbjct: 641 SRAFYYHKQMVRNGQVPDAKSYRKLLNTL 669
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 122/314 (38%), Gaps = 50/314 (15%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
+P L L + +AL+ + E EI+ +RG ++ + YN+ M+ G Y
Sbjct: 231 LPISLSLQTWLVALVVLGRARMADEILEILGSLPPERGF-REAVLYNAAMSGVAYCGRYD 289
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSAC----AAASDGEGIDKIVAMMEADRGVVLDWTV 260
+ ME+ + D T SI+L A+A D K M +GV V
Sbjct: 290 DAWKIFESMEKNNVQPDHVTSSIMLLVMKRRKASAKDSW---KFFQRMN-RKGVKWSLGV 345
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
A+ + G+ K E L+ ++ + +
Sbjct: 346 SASLIKIFCDEGM---------KKEALIFQSEMGK----------------------RGI 374
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
N +YN +++ K +E AE +F E + + L N L+DAY RR
Sbjct: 375 PSNTSIYN----TIMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSRRLQPE 430
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGY-LQNNQSEKGVEA---MKKALVLLEAGTRWKP 436
E+L+ + G +PN R++ + + Y Q SEK +A MKK + +A +
Sbjct: 431 VVESLLLEMHDLGFQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKKGGI--KATSSSYT 488
Query: 437 SKECLAACLGYYKK 450
S C A G Y+K
Sbjct: 489 SLICAYAVSGQYEK 502
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 174/402 (43%), Gaps = 46/402 (11%)
Query: 64 NDSMVPLLDQWVE--EGRP-LDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPA 120
+D++ LLD+ + G P LD+ ++ R+ AL++ + K+ T
Sbjct: 165 HDAVCDLLDEMLPLPPGSPGLDVRAYTTVLHALSHEGRYERALELFAEL-KREGVAPTHV 223
Query: 121 DVAIRLDLIAKV-QGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSA--EKAEIIMQQ 177
+ LD+ ++ + Q + + P + A AC + ++A +
Sbjct: 224 MYNVMLDVYGRMGRSWPQIVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFED 283
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
++ RG V + YN+++ V+ + GNY + ++ EMEE G D T++ L + A A
Sbjct: 284 LKSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGF 343
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV---LRKSE--------- 285
E K + M +G++ + Y T + Y AG D+ALA+ ++K+
Sbjct: 344 YEEAAKCLDTM-VSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYN 402
Query: 286 -VLMMHNKFSRAYDFVI-------------------TQYAACGNKDD---VLRVWKRYKQ 322
+L M K SR ++ ++ T A CG + V RV +R K
Sbjct: 403 LILGMLGKKSR-FNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKS 461
Query: 323 -NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
+++ + +IS+ + +A K+++E + + N L+ R+G
Sbjct: 462 CGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTA 521
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
A+++I K + G +PN ++ L+ + + + G+EA++K
Sbjct: 522 AQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNA-AGIEAIEK 562
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 115/263 (43%), Gaps = 17/263 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+ L++AY S A + +M G YN++++V + G++ S++++M
Sbjct: 470 TFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKM 529
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL-DWTVYATAASGYVKAG 272
+ +G + ++S+LL A + GI+ I E G V W + T K
Sbjct: 530 KNEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEK--EVYEGTVFPSWVILRTLVISNFKC- 586
Query: 273 LSDKALAVLRKSEVLMM--HNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLK 325
+ + R + +M H ++ +++ YA G ++ KQ +L
Sbjct: 587 --RRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLI 644
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
YN ++ K + AEKI + ++ L D+ N +++ +C++GL+ +A+ +
Sbjct: 645 TYN----SMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRI 700
Query: 386 IYKAQLRGTEPNVRTWYLMATGY 408
+ + G P V T++ + GY
Sbjct: 701 LSEMIADGVRPCVVTYHTLVGGY 723
>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
Length = 969
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD---GEGIDKIVA 246
+ SM+ Y Q G Y+K L +M + ++ D+ TF +L+ACA SD G+ I V
Sbjct: 693 WTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAIHARV- 751
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
RG+ D V + Y K G D+A V K++ H S + +I YA
Sbjct: 752 ---MRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTK----HKDIS-LWTALIASYAR 803
Query: 307 CGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
G+ + L +++R +Q+ +++ N ++ ++S+ +E + F + ++
Sbjct: 804 HGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFASMAELGIEPNMEH 863
Query: 366 PNHLIDAYCRRGLLHKAETLIYK 388
+ L+D R G LH AE + +
Sbjct: 864 HSCLVDLLARAGHLHTAEEFLSR 886
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 114/272 (41%), Gaps = 21/272 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V AL N YA S +A + M + + + +N+M+ Y Q + + SL M
Sbjct: 554 VATALFNMYAKCGSLGEARGVFDSM----VFRDVVSWNNMIAAYVQGRDGEGAISLCWAM 609
Query: 214 EEKGIDCDKYTFSILLSACAAAS---DGEGIDKIVAMMEADRGVVLDW---TVYATAASG 267
+ +G+ DK TF+ LL+AC+ + DG I +A + +V+ T+YA S
Sbjct: 610 QLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSL 669
Query: 268 YVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKV 326
+ D + R+ H++ + +IT Y G L ++++ + + ++
Sbjct: 670 NNAREIFDNIFSNSRQ------HHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEA 723
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
+I V+++ + + I R L D+ + N ++ Y + G +A +
Sbjct: 724 DRVTFISVLNACAHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVF 783
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
K + ++ W + Y ++ E+ +
Sbjct: 784 EKTK----HKDISLWTALIASYARHGHGEQAL 811
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 114/269 (42%), Gaps = 14/269 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V I+L+N YA + +A + ++ +R I +NSM+ Y + ++ L L EM
Sbjct: 454 VGISLVNMYAKCGTVGEARKVFDRINNR----SRILWNSMITAYQEKDPHEALH-LFREM 508
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ +G+ D+ TF +L+AC A+D E + + D G D V + Y K G
Sbjct: 509 QPEGVSPDRITFMTVLNACVNAADLEN-GRTIHTRIVDSGFAADVRVATALFNMYAKCGS 567
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV-WKRYKQNLKVYNRGYI 332
+A V + ++ + S ++ +I Y + + + + W + ++ +
Sbjct: 568 LGEARGVF---DSMVFRDVVS--WNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFT 622
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK--AQ 390
++++ + + +I L +DI + LI Y G L+ A + +
Sbjct: 623 SLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNAREIFDNIFSN 682
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
R ++ W M T Y Q+ + K +E
Sbjct: 683 SRQHHRDLFLWTSMITAYEQHGEYRKALE 711
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 124/278 (44%), Gaps = 12/278 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ +L++AYA A+ A ++M+ G+ + Y+ +++ + + + + D+L E
Sbjct: 314 VFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEA 373
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ D + +S ++ A + + + +++V ME D G+ Y + GY
Sbjct: 374 KTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEED-GIDAPIDAYHSMMHGYTIIQD 432
Query: 274 SDKALAVL-RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGY 331
K L V R E + S Y +I Y G + + K + + +K N+ Y
Sbjct: 433 EKKCLIVFERLKECCFTPSIIS--YGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTY 490
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+IS + +A +IFEE L D I N LI+A+C+ G + +A ++ K Q
Sbjct: 491 SMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQK 550
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE 429
+P+ R + + G+ MK+AL +L+
Sbjct: 551 ERMQPSNRAFRPIIEGFAVAGD-------MKRALDILD 581
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 140/318 (44%), Gaps = 15/318 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++ + + A+ + ++ + I Y+++++ + Q+GN + + L+HEM
Sbjct: 349 TYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEM 408
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTV--YATAASGYVKA 271
EE GID + ++ D + K + + E + ++ Y + YVK
Sbjct: 409 EEDGIDAPIDAYHSMMHGYTIIQDEK---KCLIVFERLKECCFTPSIISYGCLINLYVKI 465
Query: 272 GLSDKALAVLRKSEVL-MMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNR 329
G KA+A+ ++ E + HN ++ Y +I+ + + + R+++ K L+
Sbjct: 466 GKVAKAIAISKEMESSGIKHN--NKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRA 523
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +I + K M+ A +I E+ + + R +I+ + G + +A ++
Sbjct: 524 IYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLM 583
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYK 449
+ G P V T+ + G ++ NQ E+ V + K + AG P++ + Y
Sbjct: 584 RRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSI---AGI--TPNEHTYTIIMRGYA 638
Query: 450 KERDIEGA-DYFIKLLTG 466
DI A +YF K+ G
Sbjct: 639 ATGDIAKAFEYFTKIKEG 656
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 107/249 (42%), Gaps = 3/249 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++ + A I ++M GL YN ++ + + GN + ++ +M
Sbjct: 489 TYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKM 548
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+++ + F ++ A A D + I+ +M G Y G ++
Sbjct: 549 QKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRS-GCAPTVMTYNALIHGLIRKNQ 607
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYI 332
++A++VL K + + Y ++ YAA G+ + + K+ LK+ Y
Sbjct: 608 VERAVSVLNKMSIAGI-TPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYE 666
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
++ + K M+SA + E S+ + + + N LID + RRG + +A L+ + +
Sbjct: 667 TLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKED 726
Query: 393 GTEPNVRTW 401
G PN+ T+
Sbjct: 727 GVPPNIHTY 735
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 5/152 (3%)
Query: 130 AKVQGIEQAASYFNCVPEK-LKLPSVYIALLNAYACAKSA--EKAEIIMQQMRDRGLVKK 186
A I +A YF + E LKL VYI AC KS + A + ++M + + +
Sbjct: 638 AATGDIAKAFEYFTKIKEGGLKL-DVYIYETLLRACCKSGRMQSALAVTREMSSQKIARN 696
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
T YN +++ + + G+ + LM +M+E G+ + +T++ ++AC A D + ++
Sbjct: 697 TFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVID 756
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKAL 278
M +D G+ + Y T G+ +A L D+AL
Sbjct: 757 EM-SDVGLKPNLKTYTTLIKGWARASLPDRAL 787
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 136/346 (39%), Gaps = 47/346 (13%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
+ ++ ++ G D ++I+ F A++I M K+ + P++ A R ++
Sbjct: 509 IFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKER---MQPSNRAFRPIIE 565
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
A +++A + + P+V Y AL++ E+A ++ +M G+
Sbjct: 566 GFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITP 625
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
Y +M Y TG+ K +++E G+ D Y + LL AC
Sbjct: 626 NEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACC------------ 673
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQY 304
K+G ALAV R+ S + N F Y+ +I +
Sbjct: 674 ------------------------KSGRMQSALAVTREMSSQKIARNTF--VYNILIDGW 707
Query: 305 AACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
A G+ + + K+ K++ N Y I++ K M+ A+ + +E L ++
Sbjct: 708 ARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNL 767
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
+ LI + R L +A + +L G +P+ ++ + T L
Sbjct: 768 KTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSLL 813
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 149/360 (41%), Gaps = 6/360 (1%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+L + ++ G ++ L +IK L + ALQ + F L ++ +
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALG-FHLNKVSYGTLINGL 187
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
KV A V KL P+V Y ++++ K +A + +M +G+
Sbjct: 188 CKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDV 247
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
+ YN++++ + G K L ++M + I+ + YTF+IL+ + ++AM
Sbjct: 248 VTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAM 307
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC 307
M +G+ D Y + Y +KA + + N +Y +I +
Sbjct: 308 M-MKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGV-NPNIHSYSIMIHGFCKI 365
Query: 308 GNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
D+ + ++K N + + Y +I L K + A K+ +E R + HD
Sbjct: 366 KKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITY 425
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
N ++DA C+ + KA L+ K + G +P++ T+ + G +N + E + LV
Sbjct: 426 NSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLV 485
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 127/281 (45%), Gaps = 13/281 (4%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+VY L++ + + ++A+ ++ M +G+ YNS+M+ Y K +
Sbjct: 280 PNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHI 339
Query: 210 MHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ + ++G++ + +++SI++ C E ++ M ++ D Y + G
Sbjct: 340 FNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEM--HCNNIIPDVVTYNSLIDGL 397
Query: 269 VKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNK--DDVLRVWKRYK-QNL 324
K G AL ++ + + + H+K + Y+ ++ A C N D + + + K + +
Sbjct: 398 CKLGKISYALKLVDEMHDRGVPHDKIT--YNSILD--ALCKNHQVDKAIALLTKMKDEGI 453
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
+ Y ++ L K +E A +FE+ + D+ I +I +C GL ++
Sbjct: 454 QPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLD 513
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
L+ K + G PN T+ ++ ++++K + +++ +
Sbjct: 514 LLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMI 554
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 86/216 (39%), Gaps = 13/216 (6%)
Query: 199 QTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDW 258
++ +Y + SL +ME GI D SIL++ + ++A + G +
Sbjct: 84 KSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKI-LKMGYEPNV 142
Query: 259 TVYATAASGYVKAGLSDKALAVLRKSEVLMMH-NKFSRAYDFVITQYAACGNKDDVLRVW 317
T G G +AL K L H NK S Y +I G L++
Sbjct: 143 ITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVS--YGTLINGLCKVGQTSAALQLL 200
Query: 318 KR-----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
+R + N+ +YN +I S+ K + A ++ E S+ + D+ N LI
Sbjct: 201 RRVDGKLVQPNVVMYNT----IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISG 256
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+C G + A L K PNV T+ ++ G+
Sbjct: 257 FCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGF 292
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 122/288 (42%), Gaps = 40/288 (13%)
Query: 135 IEQAASYFN-CVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYN 191
+ +A+ F+ CV ++ P+ Y AL+N + E AE+++ M+ RG+ I +N
Sbjct: 254 VRRASEVFDECVGNGIE-PNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFN 312
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
+M++ Y + G K + ME GI D YT++ L + E K++ +M +
Sbjct: 313 TMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIM-TE 371
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKD 311
GV ++ Y T S + K G +A + R M K SR V+T
Sbjct: 372 NGVESNYVSYTTLISIHSKEGDMVEARRLFRD-----MEGKGSRPS--VVT--------- 415
Query: 312 DVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
Y +I +K + AE+ +E E + L D+ L+
Sbjct: 416 -------------------YNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVH 456
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+C G + A L + + RG +PNV + + +G + +SE+ +
Sbjct: 457 GHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQ 504
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 113/258 (43%), Gaps = 36/258 (13%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
+++ + A + A ++ +M G+ YN +++ Y + N ++ ++ EME G
Sbjct: 139 VVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGG 198
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
++ T++IL+ + A D ++ + ++ + V D Y+ + Y +AG
Sbjct: 199 VEPTVGTYTILVDGLSTAGDISKVESVFDEIKR-KNVAGDVYFYSAVINAYCRAG----- 252
Query: 278 LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISS 337
V R SEV +D + GN ++ R Y +I+
Sbjct: 253 -NVRRASEV----------FDECV------GN-------------GIEPNERTYGALING 282
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
K +E+AE + + + R + H+ I N +ID YCR G++ KA + + G + +
Sbjct: 283 FCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLD 342
Query: 398 VRTWYLMATGYLQNNQSE 415
V T+ +A G + N+ E
Sbjct: 343 VYTYNTLACGLCRVNRME 360
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 125/283 (44%), Gaps = 5/283 (1%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K Q +++A + + +P Y ++++ + + ++A + +++MR G+
Sbjct: 133 LCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPD 192
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ YNS+M+ + G + + M ++G+ + T+ LL A + ++
Sbjct: 193 VVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 252
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
+M G+ + V++ Y K ++A+ V K + N + Y VI
Sbjct: 253 LM-VRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGL-NPNAVTYGAVIGILCK 310
Query: 307 CGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
G +D + +++ + L N Y +I L + E AE++ E R +C +
Sbjct: 311 SGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 370
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
N +ID++C+ G + ++E L G +P++ T+ + GY
Sbjct: 371 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 413
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 151/350 (43%), Gaps = 22/350 (6%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV--AI 124
M LLD V G + I++ + ++ A+ + M ++ L P V
Sbjct: 247 MHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG---LNPNAVTYGA 303
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRG 182
+ ++ K +E A YF + ++ P VY +L++ E+AE ++ +M DRG
Sbjct: 304 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 363
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ TI +NS+++ + + G + + L M G+ D T+S L+ A +
Sbjct: 364 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 423
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV------LMMHNKFSRA 296
K++A M G+ D Y+T +GY K AL + R+ E ++ +N +
Sbjct: 424 KLLASM-VSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQG 482
Query: 297 YDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
F + AA K+ + + K +Q L YN ++ L K + A ++F+
Sbjct: 483 L-FQTRRTAAA--KELYVGITKSGRQLELSTYN----IILHGLCKNKLTDDALRMFQNLC 535
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
+L + R N +IDA + G +A+ L G PN T+ LMA
Sbjct: 536 LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMA 585
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 114/280 (40%), Gaps = 33/280 (11%)
Query: 162 YACAKS-AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
Y C +A I M RGL + Y +++ Y G ++ L+ M GI
Sbjct: 202 YLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 261
Query: 221 DKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV 280
+ Y FSIL+ A A E + + M +G+ + Y K+G + A+
Sbjct: 262 NHYVFSILVCAYAKQEKVEEAMLVFSKMR-QQGLNPNAVTYGAVIGILCKSGRVEDAMLY 320
Query: 281 LRKSEVLMMHNKFSRA---YDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYIC--- 333
+ M+ S Y+ +I C NK W+R ++ L++ +RG IC
Sbjct: 321 FEQ----MIDEGLSPGNIVYNSLIHGLCTC-NK------WERAEELILEMLDRG-ICLNT 368
Query: 334 -----VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+I S K + +EK+F+ + DI + LID YC G + +A L+
Sbjct: 369 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLAS 428
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLL 428
G +P+ T+ + GY + + MK ALVL
Sbjct: 429 MVSVGMKPDCVTYSTLINGYCK-------ISRMKDALVLF 461
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 105/267 (39%), Gaps = 24/267 (8%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC--DKYTFS 226
E A + ++ RG + YN ++N ++ L+H M + G DC D ++S
Sbjct: 34 EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 227 ILLSACAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKALAVLR-- 282
+++ D +DK + D+ + + Y + + KA DKA+ VL
Sbjct: 93 TVINGFFKEGD---LDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM 149
Query: 283 -KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNRGYICVIS 336
KS V+ Y+ ++ + + G + + K+ + ++ YN ++
Sbjct: 150 VKSGVM----PDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNS----LMD 201
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
L K A KIF+ R L +I L+ Y +G L + L+ G P
Sbjct: 202 YLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 261
Query: 397 NVRTWYLMATGYLQNNQSEKGVEAMKK 423
N + ++ Y + + E+ + K
Sbjct: 262 NHYVFSILVCAYAKQEKVEEAMLVFSK 288
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 131/294 (44%), Gaps = 17/294 (5%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
++ AK+ + A F+ + K + Y L++AY+ + A + +MRDR +V
Sbjct: 138 INFYAKINDLGSAELIFDGILVKDTIA--YNCLISAYSRSGEVLAARELFDKMRDRSIVS 195
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
+N+M++ Y Q G+Y K + M+++ + ++ T + +LS CA D E + +
Sbjct: 196 ----WNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLE-MGLRI 250
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
+ ++ + + V YVK G D V M + + +I YA
Sbjct: 251 KKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDH-----MARRDVVTWSAMIAGYA 305
Query: 306 ACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
G ++ L +++ K +K + + V+S+ + +E+ E+I ESR L ++
Sbjct: 306 QNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVY 365
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
+ + L+ Y + G + KA + K R NV TW M G N +E +
Sbjct: 366 VASALLGMYSKCGNIIKARQIFDKLPQR---DNV-TWNSMIMGLAINGFAEDAI 415
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 107/248 (43%), Gaps = 3/248 (1%)
Query: 176 QQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAA 235
++M++ G+ YN +MN + G K + EM E+G+ C+ T++ L+
Sbjct: 257 EKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 236 SDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR 295
+K++ M++ + + Y T G+ G KAL++ R + +
Sbjct: 317 MKANEANKVMDQMKS-YVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLV- 374
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
Y+ +++ + G+ ++ K ++ +K Y +I + + D ME+A ++
Sbjct: 375 TYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSM 434
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
E L D+ + LI +C +G +++A L + EPN + M GY + S
Sbjct: 435 EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSS 494
Query: 415 EKGVEAMK 422
+ + +
Sbjct: 495 YRALRLFR 502
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 142/344 (41%), Gaps = 52/344 (15%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y ++NAY ++S + + +M D+G V + +N+++ + ++ + +E
Sbjct: 96 LYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES 155
Query: 214 EEKGIDCDKYTFSILLSACAAASDGE-GIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ K + D Y+F I++ C A + E D +V + E G + +Y T G K G
Sbjct: 156 KIK-VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREF--GFSPNVVIYTTLIDGCCKKG 212
Query: 273 LSDKA-----------LAVLRKSEVLMMHNKFSRA-----------------------YD 298
+KA L + +++H F Y+
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYN 272
Query: 299 FVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNRGYICVISSLLKFDGMESAEKIFEE 353
V+ Q G D +V+ ++ N+ YN +I L + A K+ ++
Sbjct: 273 CVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNT----LIGGLCREMKANEANKVMDQ 328
Query: 354 WESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
+S + ++ N LID +C G L KA +L + RG P++ T+ ++ +G+ +
Sbjct: 329 MKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGD 388
Query: 414 SEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGA 457
+ + +K+ + E G KPSK + + + ++E A
Sbjct: 389 TSGAAKMVKE---MEERGI--KPSKVTYTILIDTFARSDNMETA 427
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 36/243 (14%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ + KA + + ++ RGL + YN +++ + + G+ ++ EME
Sbjct: 341 YNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEME 400
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
E+GI K T++IL+ A + + E ++ + ME + G+V D Y+ G+ G
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMETAIQLRSSME-ELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
++A + L KS V M Y+ +I Y G+ LR
Sbjct: 460 NEA-SRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALR------------------- 499
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
+F + E + L ++ ++LI C+ L +AE L+ K G
Sbjct: 500 ---------------LFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGI 544
Query: 395 EPN 397
+P+
Sbjct: 545 DPS 547
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 123/288 (42%), Gaps = 48/288 (16%)
Query: 163 ACAKSA--EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
AC + ++A ++ G T YNSM+ V+ + G Y + +++ EME+ +
Sbjct: 317 ACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEP 376
Query: 221 DKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALA 279
D T++ L++A A EG I M A +GV+ + Y T + Y KAG +DKAL
Sbjct: 377 DAITYNELVAAYVRAGFHDEGAAVIDTM--ASKGVMPNAITYTTVINAYGKAGDADKALE 434
Query: 280 VLRK-------------SEVLMMHNKFSRAYDFVI------------------TQYAACG 308
V + + VL++ K SR+ D + T A CG
Sbjct: 435 VFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCG 494
Query: 309 NK------DDVLRVWKR--YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
K VLR K ++ + + +N +IS+ + K++ E +
Sbjct: 495 EKGKQKFVSQVLREMKNCGFEPDKETFNT----LISAYGRCGSEVDVAKMYGEMVAAGFT 550
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
I N L++A RRG AE+++ + +G +PN ++ L+ Y
Sbjct: 551 PCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCY 598
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 133/316 (42%), Gaps = 53/316 (16%)
Query: 138 AASYFNCVP-EKLKLP-SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMN 195
A+ F+ +P E+ L +L+AYA ++A I ++M++ GL + YN M++
Sbjct: 221 ASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLD 280
Query: 196 VYYQTGN-YKKLDSLMHEMEEKGIDCDKYTFSILLSACA--------------------- 233
VY + G + + L+ EM KG++ D++T + ++SAC
Sbjct: 281 VYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYK 340
Query: 234 ---------------AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKAL 278
A E ++ I+ ME D D Y + YV+AG D+
Sbjct: 341 PGTATYNSMLQVFGKAGVYTEALN-ILKEME-DNNCEPDAITYNELVAAYVRAGFHDEGA 398
Query: 279 AVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISS 337
AV+ + +M N + Y VI Y G+ D L V+ + K+ V N +C ++
Sbjct: 399 AVIDTMASKGVMPNAIT--YTTVINAYGKAGDADKALEVFGQMKELGCVPN---VCTYNN 453
Query: 338 LLKFDGMESAE----KIFEEWESRNLCHDIRIPNHLIDAYC-RRGLLHKAETLIYKAQLR 392
+L G S KI + + N C RI + + A C +G ++ + +
Sbjct: 454 VLVLLGKRSRSEDMIKILCDMK-LNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNC 512
Query: 393 GTEPNVRTWYLMATGY 408
G EP+ T+ + + Y
Sbjct: 513 GFEPDKETFNTLISAY 528
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 154/344 (44%), Gaps = 31/344 (9%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
NC E K + L++AY S + +M G YN+++N + GN
Sbjct: 511 NCGFEPDK--ETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGN 568
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
+K +S++ +M +KG ++ ++S+LL + A + G++K V M D V W +
Sbjct: 569 WKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEK-VEMEIYDGHVFPSWMLLR 627
Query: 263 TAASGYVKA----GLSDKALAVLR----KSEVLMMHNKFSRAYDFVITQYAACGNKD-DV 313
T K G+ ++A L+ K +++++++ S FV Q ++ DV
Sbjct: 628 TLVLTNYKCRQLKGM-ERAFHQLQNNGYKLDMVVINSMLSM---FVRNQKLEKAHEMLDV 683
Query: 314 LRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAY 373
+ V + NL YN +I + AE++ ++ ++ + D+ N +I +
Sbjct: 684 IHV-SGLQPNLVTYNS----LIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGF 738
Query: 374 CRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTR 433
C++GL+ +A ++ + G +P T+ + Y N + E ++ ++E G
Sbjct: 739 CKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEADEVIR---YMIEHGCM 795
Query: 434 WKPSKECLAACL-GYYKKERDIEGADYFIKLLTGKEI-ISADLQ 475
P++ + GY K ++ E D+ K+ KEI IS D Q
Sbjct: 796 --PNELTYKIVIDGYIKAKKHKEAMDFVSKI---KEIDISFDDQ 834
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 135/325 (41%), Gaps = 40/325 (12%)
Query: 136 EQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
++ A+ + + K +P+ Y ++NAY A A+KA + QM++ G V YN++
Sbjct: 395 DEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNV 454
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
+ + + + + ++ +M+ G D+ T++ +L+ C + + +++ M+ + G
Sbjct: 455 LVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMK-NCG 513
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN---- 309
D + T S Y + G S+ +A + V Y+ ++ A GN
Sbjct: 514 FEPDKETFNTLISAYGRCG-SEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAA 572
Query: 310 KDDVLRVWKR-YKQNLKVYNRGYICV-----ISSLLK-----FDG--------------- 343
+ VL + K+ +K N Y+ C + L K +DG
Sbjct: 573 ESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLT 632
Query: 344 ------MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
++ E+ F + ++ D+ + N ++ + R L KA ++ + G +PN
Sbjct: 633 NYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPN 692
Query: 398 VRTWYLMATGYLQNNQSEKGVEAMK 422
+ T+ + Y + K E +K
Sbjct: 693 LVTYNSLIDLYARVGDCWKAEEMLK 717
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 74/160 (46%), Gaps = 3/160 (1%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
L + + Q +E+A + + P++ Y +L++ YA KAE +++ +++ G+
Sbjct: 665 LSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGI 724
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ YN+++ + + G ++ ++ EM G+ TF+ +S A D+
Sbjct: 725 SPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEADE 784
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
++ M + G + + Y GY+KA +A+ + K
Sbjct: 785 VIRYM-IEHGCMPNELTYKIVIDGYIKAKKHKEAMDFVSK 823
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 91/236 (38%), Gaps = 47/236 (19%)
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
++++ Y +TG YK+ + +M+E G+D T++++L G I+ +++
Sbjct: 242 TVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKM--GRAWSMILELLDEM 299
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKD 311
R L++ + T +ACG ++
Sbjct: 300 RSKGLEFDEFTCT-------------------------------------TVISACG-RE 321
Query: 312 DVLRVWKRYKQNLKV--YNRGYICVISSLLKFDG----MESAEKIFEEWESRNLCHDIRI 365
+L +R+ +LK+ Y G +S+L+ G A I +E E N D
Sbjct: 322 GILDEARRFFDDLKLNGYKPG-TATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAIT 380
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
N L+ AY R G + +I +G PN T+ + Y + ++K +E
Sbjct: 381 YNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVF 436
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 131 KVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
+++G+E+A KL + V ++L+ + + EKA ++ + GL + Y
Sbjct: 638 QLKGMERAFHQLQNNGYKLDM-VVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTY 696
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMME 249
NS++++Y + G+ K + ++ +++ GI D +++ ++ C E I +I++ M
Sbjct: 697 NSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAI-RILSEMT 755
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKALAVLR 282
A+ GV + T S Y GL +A V+R
Sbjct: 756 AN-GVQPCPITFNTFMSCYAGNGLFAEADEVIR 787
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 145/335 (43%), Gaps = 20/335 (5%)
Query: 99 FSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YI 156
FS A+Q + +K N + D + K+ A +++ + + P V +
Sbjct: 171 FSDAIQ-CFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFN 229
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
L++ +A+++ ++ RGL + +N+++N Y ++GN + L M E
Sbjct: 230 VLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMEN 289
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
+ D +T+S+L++ + +K+ M DRG+V + + T +G+ G +D
Sbjct: 290 RVFPDVFTYSVLINGLCKEGQLDDANKLFLEM-CDRGLVPNDVTFTTLINGHCVTGRADL 348
Query: 277 ALAVLR-------KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLR-VWKRYKQNLKVYN 328
+ + + K +V+ Y+ +I G+ + + V + ++ LK
Sbjct: 349 GMEIYQQMLRKGVKPDVI--------TYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDK 400
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y +I K +ESA +I +E + D LI +CR G + +AE + +
Sbjct: 401 FTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLRE 460
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G +P+ T+ ++ G+ + + G + +K+
Sbjct: 461 MLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKE 495
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 104/277 (37%), Gaps = 43/277 (15%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+N + A + +M DRGLV + + +++N + TG + +M
Sbjct: 297 TYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQM 356
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
KG+ D T++ L++ D K+V M RG+ D Y G K G
Sbjct: 357 LRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEM-TQRGLKPDKFTYTMLIDGCCKEGD 415
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
+ AL + RK V K+ +++ N +
Sbjct: 416 LESALEI-RKEMV----------------------------------KEGIELDNVAFTA 440
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+IS + + AE+ E + D +I +C++G + L+ + Q G
Sbjct: 441 LISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDG 500
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA 430
P V T+ ++ G + Q MK A +LL+A
Sbjct: 501 HVPGVVTYNVLLNGLCKQGQ-------MKNANMLLDA 530
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 126/311 (40%), Gaps = 47/311 (15%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y +++ YA ++A + ++M+ RGL+ + NS + + G K+ M
Sbjct: 337 TYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSM 396
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
KG D +++ LL A+ + + M+++ G+ + V+ Y K G+
Sbjct: 397 TAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSN-GIAANCHVFTILIHAYAKRGM 455
Query: 274 SDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLR-----VWKRYKQNLK 325
D A+ + + M S Y VI+ ++ G D + V + + N
Sbjct: 456 VDDAMLIFTE----MQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTA 511
Query: 326 VYN---RGYICVISSLLKFD---------GMESAEKIFEEWESRNLCHDIRI-------- 365
VY+ +G+ C+ L+K G+ + +F +LC D R+
Sbjct: 512 VYSSIIQGF-CMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFD 570
Query: 366 --------P-----NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
P N LID YC G + KA ++ ++ G EP++ T+ + GY +N
Sbjct: 571 LATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNG 630
Query: 413 QSEKGVEAMKK 423
+ G+ ++
Sbjct: 631 RINDGLTLFRE 641
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 142/339 (41%), Gaps = 14/339 (4%)
Query: 57 LSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFV 116
S MG D+M +Q V G + II+ F ++ A ++ M K +
Sbjct: 485 FSRMGRLTDAMEKF-NQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKG--I 541
Query: 117 LTPADVAIR--LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAE 172
P V ++ + K + A F+ + + P V + +L++ Y +KA
Sbjct: 542 PRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAF 601
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
I+ M G+ + YN++++ Y++ G +L EM+ KG+ + T+ I+L+
Sbjct: 602 KILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGL 661
Query: 233 -AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
A K M+E+ G + ++Y G + +D+A+ + +K + M+
Sbjct: 662 FRAGRTVAARKKFHEMIES--GTTVTVSIYGIILGGLCRNNCADEAIILFQK--LGTMNV 717
Query: 292 KFS-RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEK 349
KFS + +I K++ ++ + + N Y +I +LLK G+E A
Sbjct: 718 KFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANN 777
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+F E + R+ N +I +G + KA + K
Sbjct: 778 MFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSK 816
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 109/277 (39%), Gaps = 7/277 (2%)
Query: 144 CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
C P+ + +V N K+ + +M +G+ + YN +++ +
Sbjct: 261 CSPDVVAYSTVIHGFFNEGETGKACS----LFHEMTRQGVKPDVVTYNLIIDALCKARAM 316
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYAT 263
K + ++ +M G D T+S ++ A + K+ M+ RG++ + +
Sbjct: 317 DKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMK-KRGLIPNIVTCNS 375
Query: 264 AASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN 323
+ K G S +A A S H +Y ++ YA+ G D++ ++ K N
Sbjct: 376 FLASLCKHGRSKEA-AEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSN 434
Query: 324 LKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
N + +I + K ++ A IF E + + + D+ + +I + R G L A
Sbjct: 435 GIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDA 494
Query: 383 ETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+ RG +PN + + G+ + K E
Sbjct: 495 MEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKE 531
>gi|302794911|ref|XP_002979219.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
gi|300152987|gb|EFJ19627.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
Length = 1143
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 122/291 (41%), Gaps = 53/291 (18%)
Query: 146 PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
PE + VY +++ A EKA ++++MR GL ++ + ++N Y + G +
Sbjct: 786 PELPRNNFVYSSMVGALINCNQLEKAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGLVED 845
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAA 265
D+L+H M G+ LD Y T
Sbjct: 846 ADALIH------------------------------------MARGDGIPLDIVAYNTII 869
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-----Y 320
++AG KA+ L + + YD +I+ +A G D +++K +
Sbjct: 870 KADLRAGRLKKAIDTYSSLTNLGLRPSL-QTYDTMISVFAKSGRTRDAEKMFKDLKSAGF 928
Query: 321 KQNLKVYNRGYICVISSLLKFDGM-ESAEKIFEEWESRNL-CHDIRIPNHLIDAYCRRGL 378
+ + KVY++ C S GM E A +FE + R L H++ N+LIDAY R G
Sbjct: 929 QPDEKVYSQMMNCYAKS-----GMYEHAADLFEAMKLRGLRPHEVSY-NNLIDAYARAGQ 982
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN---NQSEKGVEAMKKALV 426
KAE L+ + G P+ T+ L+ + Y N++E +E M+ A +
Sbjct: 983 FAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAENALERMQTAAI 1033
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 132/315 (41%), Gaps = 44/315 (13%)
Query: 143 NCVPEKLKL-PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
+ V E ++L P Y ++ Y E+A + + M G ++ YN ++++ + G
Sbjct: 371 DLVEESVELSPLAYALMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLG 430
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVY 261
Y + + M+ + + KY+++ +L C A E I + M+ R V D VY
Sbjct: 431 RYDEAVDVFTAMQRQELCTSKYSYATMLHICEKADKFELAASIFSDMQMKRCPV-DEVVY 489
Query: 262 ATAASGYVKAGLSDKALAVLRK----------------SEVLMMHNKFSRAYDFVITQYA 305
+ S Y KAGL D+A + ++ + V + K++ A + A
Sbjct: 490 TSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLA 549
Query: 306 ACGNKDD---------------VLRVWKRYKQ-------NLKVYNRGYICVISSLLKFDG 343
N DD V R K +K +L YN ++S +FD
Sbjct: 550 KGLNLDDTAWKTLLHCYVKAGNVERATKTFKTLVESGIADLMAYND----MLSLYAEFDM 605
Query: 344 MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYL 403
+E A+ +F++ +S ++ D ++ YC ++ AE ++ + + +G P+ T +
Sbjct: 606 LEDAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKGFTPDHITQGI 665
Query: 404 MATGYLQNNQSEKGV 418
+ Y + N+ E+
Sbjct: 666 LINAYGEANRIEEAA 680
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 22/286 (7%)
Query: 149 LKLPSVYIA-LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLD 207
LK SV ++ LLNAY+ A E A+ ++ R G+ + YN+++ + G KK
Sbjct: 823 LKCDSVLVSILLNAYSKAGLVEDADALIHMARGDGIPLDIVAYNTIIKADLRAGRLKKAI 882
Query: 208 SLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
+ G+ T+ ++S A + +K+ +++ G D VY+ +
Sbjct: 883 DTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKS-AGFQPDEKVYSQMMNC 941
Query: 268 YVKAGLSDKA--------LAVLRKSEVLMMHNKFSRAYDFVITQYAACGN--KDDVLRVW 317
Y K+G+ + A L LR EV +Y+ +I YA G K + L V
Sbjct: 942 YAKSGMYEHAADLFEAMKLRGLRPHEV---------SYNNLIDAYARAGQFAKAEQLLV- 991
Query: 318 KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
+ K + ++ +IS+ AE E ++ + +R N ++ A+ R
Sbjct: 992 EMAKAGCPPSSVTFLLLISAYAHRGKCNEAENALERMQTAAIRPTVRHYNEVMLAFSRAR 1051
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
L +A K + G +P+V + M L+ + E+G+ KK
Sbjct: 1052 LPSQAMESYLKMERSGIQPDVVSSRTMIRILLEGSMFEEGLSLYKK 1097
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 77 EGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPA----DVAIRLDLIAKV 132
+G PLD+ IIK R A+ +T N L P+ D I + AK
Sbjct: 856 DGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLT---NLGLRPSLQTYDTMI--SVFAKS 910
Query: 133 QGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
A F + P VY ++N YA + E A + + M+ RGL + Y
Sbjct: 911 GRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSY 970
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
N++++ Y + G + K + L+ EM + G TF +L+SA A
Sbjct: 971 NNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYA 1013
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 124/324 (38%), Gaps = 43/324 (13%)
Query: 131 KVQGIEQAASYFNCVPEK-LKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
K +E+A F + E + Y +L+ YA E A+++ QQ++ + +
Sbjct: 568 KAGNVERATKTFKTLVESGIADLMAYNDMLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVW 627
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
+ +M+ +Y + ++ +M EKG D T IL++A A+ I++ ++E
Sbjct: 628 FGTMVKLYCNANMVAAAEEVLRQMREKGFTPDHITQGILINAYGEANR---IEEAAGLLE 684
Query: 250 AD----------------------------------RGVVLDWTVYATAASGYVKAGLSD 275
A LD Y ++KAG
Sbjct: 685 ASAKEDESEAAAISRIYLCLKFRLFDKATLLLHRVLESFTLDSAAYNQLTINFLKAGQVP 744
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVI 335
A + + M +K D + A K V + K L N Y ++
Sbjct: 745 PAEMLHSR-----MQDKGFDVEDSTLGHLIAAYGKAGRYEVLTKLKPELPRNNFVYSSMV 799
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
+L+ + +E A + E+ L D + + L++AY + GL+ A+ LI+ A+ G
Sbjct: 800 GALINCNQLEKAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGLVEDADALIHMARGDGIP 859
Query: 396 PNVRTWYLMATGYLQNNQSEKGVE 419
++ + + L+ + +K ++
Sbjct: 860 LDIVAYNTIIKADLRAGRLKKAID 883
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 105/259 (40%), Gaps = 38/259 (14%)
Query: 166 KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF 225
K E+AE +++ RG V + Y ++M Y++ + L EM ++ + YT+
Sbjct: 470 KRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTY 529
Query: 226 SILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS 284
+ L+ C E IDK+ +M+ +G+V D T Y Y K G +KA
Sbjct: 530 NTLIKGLCTIGKLTEAIDKLNELMK--KGLVPDDTTYNIIIHAYCKEGDLEKAF------ 581
Query: 285 EVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGM 344
HNK Y +K ++ N +++ L +
Sbjct: 582 ---QFHNKMLENY----------------------FKPDVVTCN----TLMNGLCLHGKL 612
Query: 345 ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
E A K+FE W + D+ N LI A C+ G + A + RG +P+ T+ ++
Sbjct: 613 EKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVV 672
Query: 405 ATGYLQNNQSEKGVEAMKK 423
+ + +SE+ + K
Sbjct: 673 LSALSEAGRSEEAQNMLHK 691
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 10/217 (4%)
Query: 175 MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAA 234
+ M+ GL + YN+++ + + G + +L+ M+++GI + T++ L+SA A
Sbjct: 233 LSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYAR 292
Query: 235 ASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
+ +V M A G D Y A+G +AG D+A + + E L + +
Sbjct: 293 LGWIKQATNVVEAMTA-FGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDV 351
Query: 295 RAYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVYNRGYICVISSLLKFDGMESAEK 349
Y+ ++ D L + K K +L +N V+ L + +E A
Sbjct: 352 VTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHN----IVVKGLCREGQLEEALG 407
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
+ L D+ N LIDAYC+ + KA L+
Sbjct: 408 RLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLM 444
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Query: 117 LTPADVAIRLDLIA--KVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAE 172
L P D + + A K +E+A + N + E P V L+N EKA
Sbjct: 557 LVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAI 616
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+ + ++G I YN+++ + G+ +ME +G+ D +T++++LSA
Sbjct: 617 KLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSAL 676
Query: 233 AAASDGE 239
+ A E
Sbjct: 677 SEAGRSE 683
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 118/309 (38%), Gaps = 37/309 (11%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y L++AYA ++A +++ M G YN + Q G + L E
Sbjct: 281 ATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDE 340
Query: 213 MEEKGI-DCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
ME I D T++ L+ AC ++ M D+GV + G +
Sbjct: 341 MEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMR-DKGVKSSLVTHNIVVKGLCRE 399
Query: 272 GLSDKALAVLRK------SEVLMMHNKFSRAY--------DFVIT-QYAACGNKDDVLRV 316
G ++AL L+ + ++ +N AY FV+ + G K D +
Sbjct: 400 GQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTL 459
Query: 317 ---------WKRYKQNLKVY----NRGYI-------CVISSLLKFDGMESAEKIFEEWES 356
KRY++ ++ RG++ V+++ K + E A +++E
Sbjct: 460 NTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSK 519
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
R L I N LI C G L +A + + +G P+ T+ ++ Y + EK
Sbjct: 520 RKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEK 579
Query: 417 GVEAMKKAL 425
+ K L
Sbjct: 580 AFQFHNKML 588
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 123/276 (44%), Gaps = 13/276 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y AL++ E+A+ +++ + + + Y +++ + + GN + ++ +M
Sbjct: 364 MYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQM 423
Query: 214 EEKGIDCDKYTFSILLSACAA-ASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
EEK + + TFS +++ G+ D + M D G+ + Y T G+ K
Sbjct: 424 EEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKM--KDSGIAPNVVTYGTLIDGFFKFQ 481
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC----GNKDDVLRVWKRY-KQNLKVY 327
+ AL V R M+H A +FV+ GN + ++K ++ L +
Sbjct: 482 GQEAALDVYRD----MLHEGV-EANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLD 536
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
+ Y ++ L K M +A K+ +E +NL D + N I+ C G +A++ +
Sbjct: 537 HVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLK 596
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ + G EP+ T+ M + ++ K ++ +K+
Sbjct: 597 EMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKE 632
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 127/281 (45%), Gaps = 29/281 (10%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
AL++ Y + A ++++M +G+ + YNS++ ++ +G+ ++ M+
Sbjct: 192 ALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKAD 251
Query: 217 GIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAGL 273
G++ + T++ L+ C G+G+D+ ++ E GV+ D + G + G
Sbjct: 252 GVEPNVVTYTALIGEYC----KGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQ 307
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL----KVYNR 329
+A A+ R+ + K A + V C D + + +R ++L ++ +R
Sbjct: 308 FSEAYALFREMD------KIGVAPNHV----TYCTLIDSLAKA-RRGSESLGLLGEMVSR 356
Query: 330 G-------YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
G Y ++ L K +E A+ + +S N+ + L+DA+CR G + A
Sbjct: 357 GVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGA 416
Query: 383 ETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
E ++ + + + PNV T+ + G ++ K + M+K
Sbjct: 417 EQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRK 457
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 130/313 (41%), Gaps = 43/313 (13%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y AL+ Y K ++A + + M G++ + +++++ + G + + +L
Sbjct: 255 PNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYAL 314
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
EM++ G+ + T+ L+ + A A G ++ M RGVV+D +Y
Sbjct: 315 FREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEM-VSRGVVMDLVMYTALMDRLG 373
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
K G ++A VLR ++ + F Y ++ + GN D
Sbjct: 374 KEGKIEEAKDVLRHAQSDNITPNFV-TYTVLVDAHCRAGNID------------------ 414
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
AE++ + E +++ ++ + +I+ +RG L KA + K
Sbjct: 415 ----------------GAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKM 458
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYK 449
+ G PNV T+ + G+ + E ++ + +L G + + + + + +
Sbjct: 459 KDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRD---MLHEGV--EANNFVVDSLVNGLR 513
Query: 450 KERDIEGADYFIK 462
K +IEGA+ K
Sbjct: 514 KNGNIEGAEALFK 526
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 157/395 (39%), Gaps = 54/395 (13%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
LL + V G +D+ ++ + + A + + + N + +D
Sbjct: 349 LLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDV-LRHAQSDNITPNFVTYTVLVDAH 407
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
+ I+ A + EK +P+V + +++N KA M++M+D G+
Sbjct: 408 CRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNV 467
Query: 188 IDYNSMMNVYYQ-TGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ Y ++++ +++ G LD + +M +G++ + + L++ + EG + +
Sbjct: 468 VTYGTLIDGFFKFQGQEAALD-VYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFK 526
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
M+ +RG++LD Y T G K G A + + LM
Sbjct: 527 DMD-ERGLLLDHVNYTTLMDGLFKTG---NMPAAFKVGQELM------------------ 564
Query: 307 CGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
K + VYN +I + +L KF A+ +E + L D
Sbjct: 565 ----------EKNLSPDAVVYNV-FINCLCTLGKF---SEAKSFLKEMRNTGLEPDQATY 610
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
N +I A CR G KA L+ + + +PN+ T+ + G L E GV +KKA
Sbjct: 611 NTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLL-----EAGV--VKKAKF 663
Query: 427 LLE--AGTRWKPS----KECLAACLGYYKKERDIE 455
LL A + P+ + L AC G + + +E
Sbjct: 664 LLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILE 698
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 89/218 (40%), Gaps = 5/218 (2%)
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSI-LLSACAAASDGEGIDKIV 245
T+ YN + + G+ + ++ EM ++G+ D T S L+ C GE +
Sbjct: 115 TVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAA-ALA 173
Query: 246 AMMEADRGV-VLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
M+ RG+ LD + GY K ALAV+ + + Y+ ++ +
Sbjct: 174 EMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVV-GYNSLVAGF 232
Query: 305 AACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
G+ D L V +R K + N Y +I K GM+ A ++E + D+
Sbjct: 233 FHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDV 292
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+ L+D CR G +A L + G PN T+
Sbjct: 293 VTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTY 330
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 46/214 (21%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+VY L++ C A A +++ +M RG+ TI +N+++ + ++ + ++ +
Sbjct: 713 TVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQ 772
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M +G+ + TF+ LL G++ + EAD T S K G
Sbjct: 773 MLHQGLSPNIATFNTLLG---------GLESAGRIGEAD-----------TVLSDMKKVG 812
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVY 327
L L YD ++T YA NK + LR++ K + Y
Sbjct: 813 LEPNNL-----------------TYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTY 855
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
N ++S K M A+++F E + R + H
Sbjct: 856 NS----LMSDFAKAGMMNQAKELFSEMKRRGVLH 885
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
KA ++++M+ + I Y +++ + G KK L++EM G T +L
Sbjct: 625 KALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVL 684
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
AC+ + + I +I +M G+ D TVY T G++ A VL
Sbjct: 685 QACSGSRRPDVILEIHELMMG-AGLHADITVYNTLVHVLCCHGMARNATVVL-------- 735
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEK 349
D ++T+ G D + + +I K +++A
Sbjct: 736 --------DEMLTR----GIAPDTIT---------------FNALILGHCKSSHLDNAFA 768
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
I+ + + L +I N L+ G + +A+T++ + G EPN T+ ++ TGY
Sbjct: 769 IYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYA 828
Query: 410 QNNQSEKGVEAMK 422
+ + VEA++
Sbjct: 829 KKSNK---VEALR 838
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 126/296 (42%), Gaps = 9/296 (3%)
Query: 135 IEQAASYFNCVPEKLKLPSVYI-ALLNAYACAKSAEKAEI-IMQQMRDRGLVKKTIDYNS 192
+ A +F+ + P+VY +L C + K + I++ MR G + YN+
Sbjct: 131 LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNT 190
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
++ +++ G + L+ M + G+ + TF+ +++ A E K+ M +
Sbjct: 191 LVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMRE- 249
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC--GNK 310
G+ D Y T GY KAG S +AL+V + + F + C GN
Sbjct: 250 GLAPDGVSYNTLVGGYCKAGCSHEALSVFAE---MTQKGIMPDVVTFTSLIHVMCKAGNL 306
Query: 311 D-DVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
+ V V + ++ L++ + +I K ++ A + + N L
Sbjct: 307 EWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNAL 366
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
I+ YC G + +A L+++ + +G +P+V T+ + + Y +N + E ++ L
Sbjct: 367 INGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML 422
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 116/282 (41%), Gaps = 6/282 (2%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ +++N A E A + +M GL + YN+++ Y + G + S+ EM
Sbjct: 223 FNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMT 282
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+KGI D TF+ L+ A + E +V M +RG+ ++ + G+ K G
Sbjct: 283 QKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMR-ERGLQMNEVTFTALIDGFCKKGFL 341
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYIC 333
D AL +R + Y+ +I Y G D+ + + + LK Y
Sbjct: 342 DDALLAVRGMRQCRIKPSVV-CYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYST 400
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+IS+ K SA ++ ++ + + D + LI C L A L G
Sbjct: 401 IISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLG 460
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGV---EAMKKALVLLEAGT 432
+P+ T+ + G+ + E+ + + M KA VL + T
Sbjct: 461 LQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVT 502
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 117/262 (44%), Gaps = 23/262 (8%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y L+ A+ A + AE ++ M D GL + +NSM+N + G + +
Sbjct: 183 PNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKV 242
Query: 210 MHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
EM +G+ D +++ L+ C A E + M + +G++ D + +
Sbjct: 243 FDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQ--KGIMPDVVTFTSLIHVM 300
Query: 269 VKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK-----RYKQ 322
KAG + A+ ++R+ E + N+ + + +I + G DD L + R K
Sbjct: 301 CKAGNLEWAVTLVRQMRERGLQMNEVT--FTALIDGFCKKGFLDDALLAVRGMRQCRIKP 358
Query: 323 NLKVYN---RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
++ YN GY C++ M+ A ++ E E++ L D+ + +I AYC+
Sbjct: 359 SVVCYNALINGY-CMVGR------MDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 411
Query: 380 HKAETLIYKAQLRGTEPNVRTW 401
H A L + +G P+ T+
Sbjct: 412 HSAFELNQQMLEKGVLPDAITY 433
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 124/303 (40%), Gaps = 42/303 (13%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PSV Y AL+N Y ++A ++ +M +GL + Y+++++ Y + + L
Sbjct: 358 PSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFEL 417
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAA---SDGEGIDKIVAMMEADRGVVLDWTVYATAAS 266
+M EKG+ D T+S L+ SD + K + + G+ D Y +
Sbjct: 418 NQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKL----GLQPDEFTYTSLID 473
Query: 267 GYVKAGLSDKALAVLRKSEVLMMHNKFSRA--------YDFVITQYAACGNKDDVLRV-W 317
G+ K G ++AL+ +H+K +A Y +I + + ++ +
Sbjct: 474 GHCKEGNVERALS---------LHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLF 524
Query: 318 KRYKQNLKVYNRGYICVI---------SSLLKFDG------MESAEKIFEEWESRNLCHD 362
K Y + N Y ++ S L G M A+K+++ RN D
Sbjct: 525 KLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLD 584
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ + LI +CR G + KA + + RG PN + + G +N + + ++
Sbjct: 585 GSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQ 644
Query: 423 KAL 425
+ L
Sbjct: 645 QLL 647
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 153/369 (41%), Gaps = 52/369 (14%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+ D+ + EG D ++ + AL + MT+K + P DV LI
Sbjct: 242 VFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG---IMP-DVVTFTSLI 297
Query: 130 ---AKVQGIEQAASYFNCVPEK-LKLPSV-YIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
K +E A + + E+ L++ V + AL++ + + A + ++ MR +
Sbjct: 298 HVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIK 357
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI 244
+ YN+++N Y G + L+HEME KG+ D T+S ++SA D ++
Sbjct: 358 PSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFEL 417
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALA---VLRKSEVLMMHNKFSRAYDFVI 301
M ++GV+ D Y S ++ +K L+ VL K+ + + Y +I
Sbjct: 418 NQQM-LEKGVLPDAITY----SSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 472
Query: 302 TQYAACGNKDDVLRVW-KRYKQNLKVYNRGYICVISSLLK-FDGMESAEKIFEEWESRNL 359
+ GN + L + K K + Y +I+ L K ME+ + +F+ +
Sbjct: 473 DGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLY----- 527
Query: 360 CHDIRIPNH--------------------LIDAYCRRGLLHKAETLIYKAQLRGTEPNVR 399
H+ IP + L+ +C +GL+++A+ +Y++ L R
Sbjct: 528 -HEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADK-VYQSMLD------R 579
Query: 400 TWYLMATGY 408
W L + Y
Sbjct: 580 NWNLDGSVY 588
>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Glycine max]
Length = 587
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 122/290 (42%), Gaps = 47/290 (16%)
Query: 151 LPSVYIALLNAYACAKSA--EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
+P++YI +AC+KS E+AE ++ +M +G+++ YN+++++Y + G + + S
Sbjct: 193 VPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALS 252
Query: 209 LMHEMEEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
+ + ME +GI+ D ++ S++ C E + M + + Y T G
Sbjct: 253 IQNRMEREGINLDIVSYNSLIYGFCKEGRMREAM----RMFSEIKNATPNHVTYTTLIDG 308
Query: 268 YVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
Y K ++AL + + E Y V+T
Sbjct: 309 YCKTNELEEALKMCKLMEA-------KGLYPGVVT------------------------- 336
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y ++ L + + A K+ E R L D N LI+AYC+ G L A
Sbjct: 337 ---YNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKN 393
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPS 437
K G +P+ T+ + G+ + N+ E E M +L+AG + PS
Sbjct: 394 KMLEAGLKPDPFTYKALIHGFCKTNELESAKELM---FSMLDAG--FTPS 438
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 125/285 (43%), Gaps = 11/285 (3%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ KV A V KL P+V Y ++++ K +A + +M +G+
Sbjct: 171 LCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPD 230
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ Y+++++ + G L ++M + I+ D YTFSIL+ + ++A
Sbjct: 231 VVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLA 290
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDFVITQ 303
MM +G+ D Y + GY +KA ++ M + ++Y+ +I
Sbjct: 291 MM-MKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNT----MAQGGVTANVQSYNIMING 345
Query: 304 YAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
+ D+ + ++K + +N+ Y +I L K + A K+ +E R + HD
Sbjct: 346 FCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHD 405
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
N ++DA C+ + KA L+ K + G +P++ T+ ++ G
Sbjct: 406 KITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDG 450
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 134/310 (43%), Gaps = 21/310 (6%)
Query: 60 MGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTP 119
+G ND+ + L ++ + E D+ I++ F R A + M K+ + P
Sbjct: 244 LGKLNDA-IGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQG---IKP 299
Query: 120 ADVAIRLDLI---AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEII 174
DV L+ V+ + +A S FN + + +V Y ++N + K ++A +
Sbjct: 300 -DVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNL 358
Query: 175 MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAA 234
++M + ++ + YNS+++ ++G L+ EM ++G+ DK T++ +L A
Sbjct: 359 FKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCK 418
Query: 235 ASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
+DK +A++ D G+ D Y G K G A + E L++
Sbjct: 419 ---NHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIF---EDLLVKGY 472
Query: 293 FSRAYDFVITQYAACGNK--DDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEK 349
Y + + C N D L + + + N + N + Y +I SL + D + AEK
Sbjct: 473 NITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEK 532
Query: 350 IFEEWESRNL 359
+ E +R L
Sbjct: 533 LLREMIARGL 542
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 101/261 (38%), Gaps = 36/261 (13%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +L++ Y K KA+ I M G+ YN M+N + + + +L EM
Sbjct: 304 YCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMH 363
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
K I D T++ L+ + K+V M DRGV D Y + K
Sbjct: 364 CKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMH-DRGVPHDKITYNSILDALCKNHQV 422
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
DKA+A+L K KD+ ++ +Y Y +
Sbjct: 423 DKAIALLTKM-------------------------KDEGIQP--------DMYT--YTIL 447
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I L K ++ A+ IFE+ + + +I +C L KA L+ K + G
Sbjct: 448 IDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGC 507
Query: 395 EPNVRTWYLMATGYLQNNQSE 415
PN +T+ ++ + ++++
Sbjct: 508 IPNAKTYEIIILSLFEKDEND 528
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 91/227 (40%), Gaps = 15/227 (6%)
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
Y+ SL EME GI D TF+IL++ + + A + +G +
Sbjct: 72 YQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANI-LKKGYEPNAITLT 130
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMH-NKFSRAYDFVITQYAACGNKDDVLRVWKR-- 319
T G G +AL K L H NK Y +I G L++ +R
Sbjct: 131 TLIKGLCLKGQIHQALHFHDKVVALGFHLNKV--CYGTLINGLCKVGQTSAALQLLRRVD 188
Query: 320 ---YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRR 376
+ N+ +YN +I S+ K + A ++ E S+ + D+ + LI +C
Sbjct: 189 GKLVQPNVVMYNT----IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCIL 244
Query: 377 GLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN--QSEKGVEAM 421
G L+ A L K P+V T+ ++ G+ + + K V AM
Sbjct: 245 GKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAM 291
>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 823
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 123/271 (45%), Gaps = 14/271 (5%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+ AY +K + A ++ Q+ +RG + Y +++ +G+ ++ ++
Sbjct: 383 YAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLI 442
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
++G+ D +++L+S + + M DR ++ D VYAT G++++G
Sbjct: 443 DRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEM-LDRSILPDAYVYATLIDGFIRSGDF 501
Query: 275 DKA-----LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
D+A L+V + +V ++H ++ +I + G D+ L R + V ++
Sbjct: 502 DEARKVFTLSVEKGVKVDVVH------HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDK 555
Query: 330 -GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y +I +K M +A KIF + E ++ LI+ +C +G AE +
Sbjct: 556 FTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKE 615
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQS-EKGV 418
Q R PNV T+ + + + + + EK V
Sbjct: 616 MQSRDLVPNVVTYTTLIRSFAKESSTLEKAV 646
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 109/253 (43%), Gaps = 12/253 (4%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
E A ++++QMRD G + + YN++++ +++ ++ L+ EM E G T++ L
Sbjct: 295 EDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTL 354
Query: 229 LSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK--- 283
C D+ V +++ A RG + Y++ G KAG +AL K
Sbjct: 355 ---CHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMAR 411
Query: 284 SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFD 342
EV+ H AY +I G D+ +R + ++ + + +I+ L
Sbjct: 412 DEVVAPH---VIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAG 468
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
+++ ++F R D+ L+D CR + +A L + + G P+ T
Sbjct: 469 RIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRR 528
Query: 403 LMATGYLQNNQSE 415
M G L+ N+ E
Sbjct: 529 TMIHGLLEVNRDE 541
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 124/312 (39%), Gaps = 28/312 (8%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKL-PSV--YIALLNAYACAKSAEKAEIIMQQMRDRG 182
+D + K IE A + ++ + P+V Y L++ +K ++++M RG
Sbjct: 72 IDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRG 131
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ YN+++N G K+ SL+ +M G + TF +++ + E
Sbjct: 132 CAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAF 191
Query: 243 KIV-AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA----- 296
++V M + G+ D + + G K + +L HN F RA
Sbjct: 192 RVVDEMFMIESGLSPDVITFNSVLDGLCK------------EQRILDAHNVFKRALERGC 239
Query: 297 ------YDFVITQYAACGNKDDVLRVW-KRYKQNLKVYNRGYICVISSLLKFDGMESAEK 349
Y +I + D+ L++ K + + Y V+ LLK ME A
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVV 299
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
+ + D N LID + +R L +A L+ + G P+V T+ + G
Sbjct: 300 VLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLC 359
Query: 410 QNNQSEKGVEAM 421
++ + ++ VE +
Sbjct: 360 RSGRFDEAVEIL 371
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 142/368 (38%), Gaps = 62/368 (16%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQI--SMWMTKKSNFVLTPADVAIR-- 125
LL+Q G P ++ +IIK A ++ M+M + L+P +
Sbjct: 158 LLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESG---LSPDVITFNSV 214
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
LD + K Q I A + F E+ P+V Y L++ + ++A ++ +M + G
Sbjct: 215 LDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGC 274
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG----- 238
T+ Y+++++ + G + ++ +M + G D T++ L+ DG
Sbjct: 275 RANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLI-------DGFFKRQ 327
Query: 239 ---EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR 295
E + + M+EA G Y T G ++G D+A+ +L
Sbjct: 328 RLREAVGLLREMLEA--GFHPSVVTYTTLCHGLCRSGRFDEAVEIL-------------- 371
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
D++ + A N Y+ ++ L K + A FE+
Sbjct: 372 --DYMAARGCA---------------PNAITYSS----IVDGLCKAGRVTEALGYFEKMA 410
Query: 356 SRNLCHDIRIP-NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
+ I + LID C+ G + +A + + G P+V T+ ++ G +
Sbjct: 411 RDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRI 470
Query: 415 EKGVEAMK 422
+ G+E +
Sbjct: 471 DTGLELFR 478
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 7/219 (3%)
Query: 163 ACAKSA--EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
ACA+ +A+ +++ G T+ YN+++ V+ + G Y + S++ EMEE
Sbjct: 297 ACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPA 356
Query: 221 DKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV 280
D T++ L++A A A + ++ MM +GV+ + Y T Y KAG D+AL +
Sbjct: 357 DSVTYNELVAAYARAGFSKEAAVVIEMM-TQKGVMPNAITYTTVIDAYGKAGKEDEALKL 415
Query: 281 LRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLL 339
E + N + Y+ V++ ++++++ K N NR I +L
Sbjct: 416 FYSMKEAGCVPNTCT--YNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALC 473
Query: 340 KFDGMES-AEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
GM+ ++F E +S D N LI AY R G
Sbjct: 474 GNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCG 512
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 148/348 (42%), Gaps = 62/348 (17%)
Query: 115 FVLTPADVAIRLD-----LIAKVQGIEQ----AASYFNCVPEKLKLPSV--YIALLNAYA 163
VL+ A++LD ++ ++ G E AA + +P + + V Y +L+AY+
Sbjct: 169 LVLSSNSGALKLDHHVIEILVRILGRESQYSVAAKLLDKIPLQDYMLDVRAYTTILHAYS 228
Query: 164 CAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEEKGIDCDK 222
EKA + ++M++ G + YN +++V+ + G +++K+ ++ EM KG+ D+
Sbjct: 229 RTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDE 288
Query: 223 YTFSILLSACA------------------------------------AASDGEGIDKIVA 246
+T S +LSACA A E + +
Sbjct: 289 FTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 348
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR-KSEVLMMHNKFSRAYDFVITQYA 305
M E + D Y + Y +AG S +A V+ ++ +M N + Y VI Y
Sbjct: 349 MEENN--CPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAIT--YTTVIDAYG 404
Query: 306 ACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAE----KIFEEWESRNLCH 361
G +D+ L+++ K+ V N C +++L G +S K+ + +S N C
Sbjct: 405 KAGKEDEALKLFYSMKEAGCVPN---TCTYNAVLSMLGKKSRSNEMIKMLCDMKS-NGCF 460
Query: 362 DIRIPNHLIDAYC-RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
R + I A C +G+ + + + G EP+ T+ + + Y
Sbjct: 461 PNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAY 508
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 86/191 (45%), Gaps = 21/191 (10%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++ ++L+ + ++AE I+Q + + GL + YNS+M++Y + G K + ++ +
Sbjct: 640 IFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTL 699
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
E+ + D +++ ++ C E + + M E RG+ Y T SGY G
Sbjct: 700 EKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTE--RGIRPCIFTYNTFVSGYTAMG 757
Query: 273 LSDKALAVL--------RKSEVLM--------MHNKFSRAYDFV--ITQYAACGNKDDVL 314
+ + V+ R +E+ K+S A DFV I + C + +
Sbjct: 758 MYGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFDDQSIQ 817
Query: 315 RVWKRYKQNLK 325
R+ R ++NL+
Sbjct: 818 RLALRVRENLE 828
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 115/300 (38%), Gaps = 20/300 (6%)
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
+K+ G A + CV + Y ALLNA A E ++ M+ +G
Sbjct: 518 SKMYGEMTRAGFNACV-------TTYNALLNALARKGDWRSGENVISDMKSKGFKPTETS 570
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
Y+ M+ Y + GNY ++ + + E I LL A G ++ + +
Sbjct: 571 YSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFK 630
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK------SEVLMMHNKFSRAYDFVITQ 303
G D ++ + S + + + D+A +L+ + L+ +N Y +
Sbjct: 631 -KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMY----VR 685
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
C +++L+ + K LK Y VI + M+ A ++ E R + I
Sbjct: 686 RGECWKAEEILKTLE--KSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCI 743
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
N + Y G+ + E +I PN T+ ++ GY + + + ++ + K
Sbjct: 744 FTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSK 803
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 112/267 (41%), Gaps = 18/267 (6%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ ++M+ G +N++++ Y + G+ + EM G + T++ LL+A A
Sbjct: 485 VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALA 544
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF 293
D + +++ M++ +G T Y+ Y K G L + R E + F
Sbjct: 545 RKGDWRSGENVISDMKS-KGFKPTETSYSLMLQCYAKGG---NYLGIERIEEGINEGQIF 600
Query: 294 S-----RAYDFVITQYAACGNKDDVLRVWKR--YKQNLKVYNRGYICVISSLLKFDGMES 346
R + A + ++K+ YK ++ ++N ++S + + +
Sbjct: 601 PSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNS----MLSIFTRNNMYDQ 656
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
AE I + L D+ N L+D Y RRG KAE ++ + +P++ ++ +
Sbjct: 657 AEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIK 716
Query: 407 GYLQNNQSEKGVEAMKKALVLLEAGTR 433
G+ + ++ V + + + E G R
Sbjct: 717 GFCRKGLMQEAVRMLSE---MTERGIR 740
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 61/345 (17%), Positives = 139/345 (40%), Gaps = 43/345 (12%)
Query: 119 PADVAIRLDLIA---KVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEI 173
PAD +L+A + ++AA + +K +P+ Y +++AY A ++A
Sbjct: 355 PADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALK 414
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ M++ G V T YN+++++ + ++ ++ +M+ G ++ T++ +L+ C
Sbjct: 415 LFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCG 474
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKAL--------------- 278
+ ++++ M++ G D + T S Y + G A
Sbjct: 475 NKGMDKFVNRVFREMKS-CGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACV 533
Query: 279 --------AVLRKSEVLMMHNKFS-----------RAYDFVITQYAACGNKDDVLRVWKR 319
A+ RK + N S +Y ++ YA GN + R+ +
Sbjct: 534 TTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEG 593
Query: 320 YKQNLKVYNRGYICVISSLLKFD--GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
+ +++ + L F + +E+ F ++ D+ I N ++ + R
Sbjct: 594 INEG-QIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNN 652
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ +AE ++ G P++ T+ + Y++ + K E +K
Sbjct: 653 MYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILK 697
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 131/313 (41%), Gaps = 25/313 (7%)
Query: 124 IRLDLIAKVQGIEQAASYF------NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQ 177
I +D + K + +A + F C P+ + Y +L++ Y E+ E+++ +
Sbjct: 204 IVIDFLCKQGELVEARALFVRMKAMGCSPDVV----TYNSLIDGYGKCGELEEVELLVSE 259
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAAS 236
MR G + YN+++N + + G +K S EM+ G+ + T S + A C
Sbjct: 260 MRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGL 319
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF-SR 295
E + K+ A M RG++ + Y + G KAG D A+ +L + M+H
Sbjct: 320 VREAM-KLFAQMRV-RGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDE----MVHQGLVPN 373
Query: 296 AYDFVITQYAACGN-----KDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKI 350
+ + C DDVL + +R +K Y +I E A +
Sbjct: 374 VVTYTVMVDGLCKEGKVAVADDVLSLMER--AGVKANELLYTTLIHGHFMNKNSERALDL 431
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
E +++ + D+ + LI C+ L +A++L++K G PN + + + +
Sbjct: 432 LNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFK 491
Query: 411 NNQSEKGVEAMKK 423
+ + V + K
Sbjct: 492 AGKESEAVALLHK 504
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 10/192 (5%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D K +A + + +P+ P+V Y AL++ A S +A +MR+ GL
Sbjct: 486 MDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGL 545
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
Y ++++ + + G+ K LM+EM +KG+ DK ++ L+ D +G
Sbjct: 546 DPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFA 605
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDFV 300
+ A M + G+ LD Y SG+ + +A VL + M+ + AY+ +
Sbjct: 606 LKAKM-IETGLQLDLYCYTCFISGFCNMNMMQEARGVLSE----MIGTGITPDKTAYNCL 660
Query: 301 ITQYAACGNKDD 312
I +Y GN ++
Sbjct: 661 IRKYQKLGNMEE 672
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 143/336 (42%), Gaps = 12/336 (3%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIAL---LNAYACAKSAEKAEIIMQQMRDRG 182
++ +K IE+A SYF + ++L + + + L ++A+ +A + QMR RG
Sbjct: 276 INCFSKFGWIEKAYSYFGEM-KRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRG 334
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
++ Y S+++ + G L+ EM +G+ + T+++++ D
Sbjct: 335 MMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVAD 394
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
++++ME GV + +Y T G+ S++AL +L + + M S Y +I
Sbjct: 395 DVLSLMER-AGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVS-LYGTLIW 452
Query: 303 QYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
D+ + + L+ Y ++ + K A + + L
Sbjct: 453 GLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQP 512
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
++ LID C+ G +++A + K + G +PNV+ + + G+ + K V M
Sbjct: 513 NVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLM 572
Query: 422 KKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGA 457
+ +++ G K + + + K+ D++GA
Sbjct: 573 NE---MVDKGMSL--DKVVYTSLIDGHMKQGDLQGA 603
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 113/275 (41%), Gaps = 46/275 (16%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY ++++ Y A+ +K I+ +++++ G I Y ++N+Y + G K ++ EM
Sbjct: 395 VYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEM 454
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY---VK 270
E GI + T+S+L++ D +A A S + +K
Sbjct: 455 ESHGIKHNNKTYSMLINGFIHLHD-----------------------FANAFSIFEDMIK 491
Query: 271 AGL-SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYN 328
+GL D+A+ Y+ ++ + GN D +R+++R K+ ++ N
Sbjct: 492 SGLQPDRAI------------------YNLLVEAFCKMGNMDRAIRIFERMKKERMQPSN 533
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
R + +I M+ A + + N LI R+ + +A +++ K
Sbjct: 534 RTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDK 593
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ G PN T+ ++ GY + K E K
Sbjct: 594 MSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTK 628
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 134/313 (42%), Gaps = 11/313 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+ Y AE A+ + ++ + + I Y+++++ + Q+GN + + L+ EM
Sbjct: 325 TYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREM 384
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
EE GID + ++ A D E IV + G Y + YVK G
Sbjct: 385 EEDGIDAPIDVYHSMMHGYTVAQD-EKKCLIVFERLKECGFRPSIISYGCLINLYVKIGK 443
Query: 274 SDKALAVLRKSEVL-MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGY 331
KALAV ++ E + HN ++ Y +I + + + +++ K L+ Y
Sbjct: 444 VPKALAVSKEMESHGIKHN--NKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIY 501
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
++ + K M+ A +IFE + + R +I+ + G + +A + +
Sbjct: 502 NLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRR 561
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKE 451
G P V T+ + G ++ +Q E+ V + K + AG P++ + Y
Sbjct: 562 SGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSI---AGI--APNEHTYTIIMRGYAAS 616
Query: 452 RDIEGA-DYFIKL 463
DI A +YF K+
Sbjct: 617 GDIGKAFEYFTKI 629
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 117/284 (41%), Gaps = 40/284 (14%)
Query: 162 YACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCD 221
YA A + MR RG+ + S+++ Y + + S + EM+ +G++
Sbjct: 263 YAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMT 322
Query: 222 KYTFSILLSACAAASDGEGIDKIV--AMMEADRGVVLDWTVYATAASGYVKAGLSDKALA 279
T+SIL++ +D E DK+ A + D L+ +Y+ + ++G D+A
Sbjct: 323 VVTYSILIAGYGKTNDAESADKLFKEAKTKLDN---LNGIIYSNIIHAHCQSGNMDRAEE 379
Query: 280 VLRKSEV-----------LMMHN------------KFSR-----------AYDFVITQYA 305
++R+ E MMH F R +Y +I Y
Sbjct: 380 LVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYV 439
Query: 306 ACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
G L V K + + +K N+ Y +I+ + +A IFE+ L D
Sbjct: 440 KIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRA 499
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
I N L++A+C+ G + +A + + + +P+ RT+ + G+
Sbjct: 500 IYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGF 543
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 5/147 (3%)
Query: 135 IEQAASYFNCVPEK-LKLPSVYIALLNAYACAKSA--EKAEIIMQQMRDRGLVKKTIDYN 191
I +A YF + E LKL VYI AC KS + A + ++M + + + T YN
Sbjct: 619 IGKAFEYFTKIKESGLKL-DVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYN 677
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
+++ + + G+ + LM +M+E GI + +TF+ ++AC A D + + ++ M AD
Sbjct: 678 ILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEM-AD 736
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKAL 278
G+ + + T G+ K L D+AL
Sbjct: 737 VGLKPNVKTFTTLIKGWAKVSLPDRAL 763
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 105/250 (42%), Gaps = 5/250 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+N + A I + M GL YN ++ + + GN + + M
Sbjct: 465 TYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERM 524
Query: 214 EEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+++ + TF ++ A A D +D + M + G Y G ++
Sbjct: 525 KKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRS--GCAPTVMTYNALIHGLIRKH 582
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGY 331
++A++VL K + + Y ++ YAA G+ + + K++ LK+ Y
Sbjct: 583 QVERAVSVLDKMSIAGIAPN-EHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIY 641
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
++ + K M+SA + E + + + I N LID + RRG + +A L+ + +
Sbjct: 642 ETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKE 701
Query: 392 RGTEPNVRTW 401
G PN+ T+
Sbjct: 702 DGIPPNIHTF 711
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 100/271 (36%), Gaps = 48/271 (17%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
C P + Y AL++ E+A ++ +M G+ Y +M Y +G+
Sbjct: 563 GCAPTVM----TYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGD 618
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
K +++E G+ D Y + LL AC
Sbjct: 619 IGKAFEYFTKIKESGLKLDVYIYETLLRACC----------------------------- 649
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKR 319
K+G ALAV R+ M K R Y+ +I +A G+ + + K+
Sbjct: 650 -------KSGRMQSALAVTRE----MSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQ 698
Query: 320 YKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
K++ N + I++ K M+ AE + +E L +++ LI + + L
Sbjct: 699 MKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSL 758
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
+A + + G +P+ ++ + T L
Sbjct: 759 PDRALKCFEEMKSAGLKPDEAAYHCLVTSLL 789
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 100/250 (40%), Gaps = 36/250 (14%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P +Y +L+ + E I ++M RG N+ M+ ++ G +K ++
Sbjct: 490 PIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFE 549
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
+M+ G D ++SIL+ A I M + +G LD Y G K+
Sbjct: 550 DMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAM-SQQGFALDARAYNAVVDGLCKS 608
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
G DKA VL + +V +H + Y
Sbjct: 609 GKVDKAYEVLEEMKVKHVHPTVAT-----------------------------------Y 633
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
++ L K D ++ A +FEE +S+ + ++ + + LID + + G + +A ++ +
Sbjct: 634 GSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMK 693
Query: 392 RGTEPNVRTW 401
+G PNV TW
Sbjct: 694 KGLTPNVYTW 703
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 121/285 (42%), Gaps = 9/285 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++ L+ A A E A ++ +++ L + YN ++ + + G+ HE+
Sbjct: 213 LFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHEL 272
Query: 214 EEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ G+ D ++ S++ C A GE +++ MEA+R V + Y T GY A
Sbjct: 273 KAHGLRPDDVSYTSMVWVLCKAGRLGEA-EELFGQMEAERDVPCAYA-YNTMIMGYGSAE 330
Query: 273 LSDKALAVL-RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
D A +L R E + + S ++ ++T D+ L ++ K++ K Y
Sbjct: 331 RFDDAYKLLERLRERGCIPSVVS--FNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTY 388
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I L + A KI +E E L ++ N ++D C+ L +A + A
Sbjct: 389 NIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASE 448
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKP 436
RG PN T+ + G + + + +K +L+AG P
Sbjct: 449 RGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEK---MLDAGHDANP 490
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 118/314 (37%), Gaps = 42/314 (13%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K +E+ + F + LP V Y L++ A A + I Q M +G
Sbjct: 532 MDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGF 591
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
YN++++ ++G K ++ EM+ K + T+ ++ A + +D+
Sbjct: 592 ALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKI---DRLDE 648
Query: 244 IVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKALAVLR------------------- 282
+ E +G+ L+ +Y++ G+ K G D+A +L
Sbjct: 649 AYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMD 708
Query: 283 ---KSEVL------------MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKV 326
K+E + M + + Y +I + W+ KQ L
Sbjct: 709 ALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIP 768
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
Y +IS L K + A +FE +++ D N LI+ +A +
Sbjct: 769 NVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVF 828
Query: 387 YKAQLRGTEPNVRT 400
+ +LRG NV+T
Sbjct: 829 EETRLRGCRLNVKT 842
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 60/340 (17%), Positives = 128/340 (37%), Gaps = 53/340 (15%)
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
++ K + +A F + + +P Y ++ Y A+ + A +++++R+RG +
Sbjct: 290 VLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIP 349
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLM----------------------------------- 210
+ +NS++ G +K+D +
Sbjct: 350 SVVSFNSILTCL---GKKRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYK 406
Query: 211 --HEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
EME G+ + + +I++ A+ E +I ++RG + Y + G
Sbjct: 407 IRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFES-ASERGCNPNSVTYCSLIDGL 465
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-----KQN 323
K G D A + K + H+ Y +I + G K+D +++K + +
Sbjct: 466 GKKGKIDDAYRLFEKM-LDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPD 524
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
L + N CV K +E IFE+ +S D+R + LI + G +
Sbjct: 525 LTLLNTYMDCV----FKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETS 580
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ +G + R + + G ++ + +K E +++
Sbjct: 581 NIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEE 620
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 55/295 (18%), Positives = 114/295 (38%), Gaps = 26/295 (8%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLP--SVYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
L + K + +++A + F+ + + K P S Y +++ A +A I +M GL
Sbjct: 358 LTCLGKKRKVDEALTLFDVMKKDAK-PNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGL 416
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG--- 240
+ N M++ + ++ + E+G + + T+ L+ DG G
Sbjct: 417 FPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLI-------DGLGKKG 469
Query: 241 -IDKIVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY 297
ID + E D G + +Y + + G + + ++ M + R
Sbjct: 470 KIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKE-----MIRRGGRPD 524
Query: 298 DFVITQYAACGNKDDVLRVWKRYKQNLKVYN-----RGYICVISSLLKFDGMESAEKIFE 352
++ Y C K + + +++K + R Y +I L K IF+
Sbjct: 525 LTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQ 584
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+ D R N ++D C+ G + KA ++ + +++ P V T+ + G
Sbjct: 585 AMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDG 639
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 154/365 (42%), Gaps = 49/365 (13%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D V LL + G D+ ++K + KR+ ++ + M + V P +VA
Sbjct: 195 DEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR----VGCPPNVAT 250
Query: 125 RLDLIAKV--QGI-EQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMR 179
LIA + G+ EQ + +PE P + Y +++ E A I+ +M
Sbjct: 251 FNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMP 310
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
GL + YN+++ +++ + L+ EM ++ D TF+IL+ +G
Sbjct: 311 SYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVD--FFCQNGL 368
Query: 240 GIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY 297
+D+++ ++E + G + D Y T +G+ K GL D+A+ +L+
Sbjct: 369 -VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLK--------------- 412
Query: 298 DFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
+ACG K + + Y V+ L + + A+++ +
Sbjct: 413 -----NMSACGCKPNTI---------------SYTIVLKGLCRAERWVDAQELISHMIQQ 452
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ N LI+ C++GL+ +A L+ + + G P++ ++ + G + ++E+
Sbjct: 453 GCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 512
Query: 418 VEAMK 422
+E +
Sbjct: 513 LELLN 517
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 47/243 (19%), Positives = 103/243 (42%), Gaps = 19/243 (7%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+++QM + G + I Y +++N + + G + L+ M G + +++I+L
Sbjct: 375 LLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLC 434
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF 293
A ++++ M +G + + + T + K GL ++A+ +L++ M+ N
Sbjct: 435 RAERWVDAQELISHM-IQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQ----MLVNGC 489
Query: 294 SR---AYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVYNRGYICVISSLLKFDG-M 344
S +Y VI G ++ L + K N +Y+ ++S L +G
Sbjct: 490 SPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSS-----MASALSREGRT 544
Query: 345 ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
+ ++F+ + + D + N +I + C+R +A G PN T+ ++
Sbjct: 545 DKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTIL 604
Query: 405 ATG 407
G
Sbjct: 605 IRG 607
>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 855
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 156/379 (41%), Gaps = 55/379 (14%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D + LL++W+ GR + +I++ H + WM + N+ +
Sbjct: 99 DDIEGLLNRWI--GR-FARKNFPFLIRELTQRGSIEHCNLVFSWMKNQKNYCARTDIYNM 155
Query: 125 RLDLIAKVQGIEQAASYF------NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQM 178
+ L A+ +QA F C P+ Y AL+NA+ A A IM M
Sbjct: 156 MIRLHARHNRTDQARGLFFEMQKCRCKPD----AETYNALINAHGRAGQWRWAMNIMDDM 211
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG 238
+ YN+++N +GN+K+ ++ +M + G+ D T +I+L+A + G
Sbjct: 212 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKS---G 268
Query: 239 EGIDKIVAMMEADRGVVL--DWTVYATAASGYVKAGLSDKALAVL-----RKSE------ 285
K ++ E +G + D T + VK DKA+ + +KSE
Sbjct: 269 TQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVV 328
Query: 286 --VLMMH------------NKFSR-----------AYDFVITQYAACGNKDDVLRVWKRY 320
M+H F+ +Y+ ++ YAA G +++ L+V+
Sbjct: 329 TFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEI 388
Query: 321 KQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
KQN + Y ++++ + + A +IF+ + NL +I N LIDAY GLL
Sbjct: 389 KQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLL 448
Query: 380 HKAETLIYKAQLRGTEPNV 398
A ++ + + PNV
Sbjct: 449 EDAIEILREMEQDKIHPNV 467
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 133 QGIE-QAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
+G+E +A FN + + P V Y +LLNAY ++ +KA I + ++ L +
Sbjct: 375 RGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVS 434
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
YN++++ Y G + ++ EME+ I + + LL+AC ID +++ E
Sbjct: 435 YNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAE 494
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKAL 278
RG+ L+ Y +A Y+ G DKA+
Sbjct: 495 M-RGIKLNTVAYNSAIGSYINVGEYDKAI 522
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 163 ACAKSAEKAEI--IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
AC + +K +I ++ RG+ T+ YNS + Y G Y K L + M +K I
Sbjct: 476 ACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKS 535
Query: 221 DKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
D T+++L+S C S GE + + MM + + VY++ Y K
Sbjct: 536 DSVTYTVLISGCCKMSKFGEALSFMEEMMHLK--LPMSKEVYSSIICAYSK 584
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 142/350 (40%), Gaps = 22/350 (6%)
Query: 79 RPLDMEQLRIIIKKFRLYKRFSHALQISMWM-TKKSNFVLTPADVAIRLDLIAKVQGIEQ 137
RP D III K++ A+ I M KKS + L + IE
Sbjct: 287 RP-DTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIEN 345
Query: 138 AASYFNC-VPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
+ FN + E LK P++ Y ALL AYA +A + +++ G + Y S++
Sbjct: 346 CEAAFNMMLAEGLK-PNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLL 404
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR-- 252
N Y ++ +K + ++ + + +++ L+ A + E +I+ ME D+
Sbjct: 405 NAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIH 464
Query: 253 -GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKD 311
VV T+ A + G K VL +E+ + + AY+ I Y G D
Sbjct: 465 PNVVSICTLLAACG----RCGQKVKIDTVLSAAEMRGIKLN-TVAYNSAIGSYINVGEYD 519
Query: 312 DVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+ ++ K+ +K + Y +IS K A EE L + + +I
Sbjct: 520 KAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSII 579
Query: 371 DAYCRR----GLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
AY ++ G + +AE+ + G P+V T+ M Y N +EK
Sbjct: 580 CAYSKQASALGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAY---NAAEK 626
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 111/248 (44%), Gaps = 9/248 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y AL+N A + A+ + +QM + G + YN +++VY + +++ ++ +
Sbjct: 313 TYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTL 372
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E++ I + T++ ++SAC + E K+ M A GV T Y S Y K G
Sbjct: 373 EKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLA-AGVKPSATTYTALISAYGKKGQ 431
Query: 274 SDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVW-KRYKQNLKVYNR 329
+KAL + R M+ R Y +I+ G + L ++ K +K+N K
Sbjct: 432 VEKALEIFRD----MIRRGCERNVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVV 487
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
+ +I++ E A ++FE+ +++ D LI AY R G +A +
Sbjct: 488 TFNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQM 547
Query: 390 QLRGTEPN 397
Q +G P+
Sbjct: 548 QTQGCHPD 555
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y AL++AY EKA I + M RG + I Y+S+++ + G ++ L +
Sbjct: 417 TTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSK 476
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M ++ + TF+ L++AC+ E ++ M+ +G D Y + Y + G
Sbjct: 477 MHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQT-QGCKPDSITYCGLITAYERGG 535
Query: 273 LSDKALAVLRKSEVLMMH 290
+AL + + H
Sbjct: 536 QWRRALKAFEQMQTQGCH 553
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 141/313 (45%), Gaps = 34/313 (10%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
+ +V + A F+ +P++ + + L++ YA + + AE++ QM R + I
Sbjct: 156 LVRVGDMSSAGRLFDMMPDRNL--ATWNTLIDGYARLREVDVAELLFNQMPARDI----I 209
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA--AASDGEGIDKIVA 246
+ +M+N Y Q +++ + +EM + GI D+ T + ++SACA A D + K +
Sbjct: 210 SWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGALD---LGKEIH 266
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
G LD + + Y K G D++L + K L N F ++ VI A
Sbjct: 267 YYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFK---LREKNLF--CWNSVIEGLAV 321
Query: 307 CGNKDDVLRVW-KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
G ++ L ++ K ++ +K ++ V+S+ +E K F ++ D I
Sbjct: 322 HGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFA-----SMTRDHSI 376
Query: 366 P---NH---LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG-YLQNNQSEKGV 418
P H ++D + GLL +A LI +L EPN W + +G L N V
Sbjct: 377 PPGVEHYGCMVDLLSKAGLLEEALQLIRTMKL---EPNAVIWGALLSGCKLHRNLEIAQV 433
Query: 419 EAMKKALVLLEAG 431
A K L++LE G
Sbjct: 434 AANK--LMVLEPG 444
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 11/237 (4%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ++++A A++ +KAE ++QM ++G++ YN+++ Y TG +K+ + EM
Sbjct: 257 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 316
Query: 215 EKGIDCDKYTFSILL-SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ I D TF++L+ S C E D M A +G D Y +GY G
Sbjct: 317 RQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTM--AMKGQNPDVFSYNIMLNGYATKG- 373
Query: 274 SDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNR 329
L + LM+ + + ++ +I YA CG D + ++ + +K
Sbjct: 374 ---CLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVL 430
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
Y VI++L + M+ A + F + + + D + LI +C G L KA+ LI
Sbjct: 431 TYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELI 487
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 118/288 (40%), Gaps = 15/288 (5%)
Query: 133 QGIEQAASYFNCVPEKLKLPSVYIALLNAYA----CAKSAEKAEIIMQ---QMRDRGLVK 185
G A + FN + + P V + YA C A + E+ + Q+ GL
Sbjct: 85 SGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRV 144
Query: 186 KTIDYNSMMNVYYQTGNYKK-LDSLMHEMEEKGIDCDKYTFSILL-SACAAASDGEGIDK 243
I N ++ + + + LD L+H E G D +++SILL S C G+ D
Sbjct: 145 DIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL 204
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ 303
+ M E D Y T G+ K G +KA + ++ + F Y V+
Sbjct: 205 LRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFV-TYSSVV-- 261
Query: 304 YAACGNKD-DVLRVWKRYKQNLKVY--NRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
+A C + D + R N V N Y +I + A ++F+E +++
Sbjct: 262 HALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSIL 321
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
D+ N L+ + C+ G + +A + ++G P+V ++ +M GY
Sbjct: 322 PDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGY 369
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/342 (18%), Positives = 128/342 (37%), Gaps = 54/342 (15%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K + +++A ++ + K LP+ Y L+ Y+ ++A + ++MR + ++
Sbjct: 264 LCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 323
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ +N +M + G K+ + M KG + D ++++I+L+ A + +
Sbjct: 324 VVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR-------KSEVLMMHNKFSRAYDF 299
+M D G+ + Y G+ DKA+ + K VL Y
Sbjct: 384 LMLGD-GIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVL--------TYTT 434
Query: 300 VITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR- 357
VI G DD + + + Q + Y C+I + A+++ E +
Sbjct: 435 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 494
Query: 358 -------------NLCHDIRIPNH---------------------LIDAYCRRGLLHKAE 383
NLC R+ + L+D YC G + KA
Sbjct: 495 MHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKAL 554
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
+ G EPN + + GY + + ++G+ ++ L
Sbjct: 555 RVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREML 596
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/271 (19%), Positives = 112/271 (41%), Gaps = 5/271 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ L+ AYA +KA II +MRD G+ + Y +++ + G ++M
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMI 456
Query: 215 EKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
++G+ DKY + L+ C S + + I +M + G+ LD ++++ + K G
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIM--NNGMHLDIVLFSSIINNLCKLGR 514
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYI 332
A + + + +H + Y ++ Y G + LRV+ ++ + Y
Sbjct: 515 VMDAQNIFDLTVNVGLHPT-AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYG 573
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+++ K ++ +F E + + + N +ID G A+ ++
Sbjct: 574 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES 633
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G N T+ ++ G +N ++ + K+
Sbjct: 634 GIAMNKCTYSIVLRGLFKNRCFDEAIFLFKE 664
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 110/272 (40%), Gaps = 22/272 (8%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY L++ Y EKA + M G+ + Y +++N Y + G + SL EM
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM 595
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME-ADRGVVLDWTVYATAASGYVKAG 272
+KGI ++I++ A G + V E + G+ ++ Y+ G K
Sbjct: 596 LQKGIKPSTILYNIIIDGLFEA--GRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNR 653
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYI 332
D+A+ + + E+ M+ K +IT RV + + G +
Sbjct: 654 CFDEAIFLFK--ELRAMNVKID-----IITLNTMIAGMFQTRRVEEAKDLFASISRSGLV 706
Query: 333 -CV------ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
CV I++L+K +E AE +F ++ D R+ NH++ R LL K E +
Sbjct: 707 PCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV-----RELLKKNEIV 761
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
A L + + + T L + S KG
Sbjct: 762 RAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 12/208 (5%)
Query: 223 YTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL- 281
+T++IL+ C A E + G+ +D + G+ +A +D+AL +L
Sbjct: 112 HTYAILMDCCTRAHRPELALAFFGQL-LRTGLRVDIIIANHLLKGFCEAKRTDEALDILL 170
Query: 282 -RKSEVLMMHNKFSRAYDFVITQYAAC-----GNKDDVLRVWKRYKQNLKVYNRGYICVI 335
R E+ + + FS + I + C G DD+LR+ Y VI
Sbjct: 171 HRTPELGCVPDVFS----YSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVI 226
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
K + A +F+E R + D + ++ A C+ + KAE + + +G
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286
Query: 396 PNVRTWYLMATGYLQNNQSEKGVEAMKK 423
PN T+ + GY Q ++ V K+
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKE 314
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 7/164 (4%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV--AIRLD 127
L+ + + G LD+ II R A I N L P V ++ +D
Sbjct: 486 LISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNI---FDLTVNVGLHPTAVVYSMLMD 542
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
V +E+A F+ + P+ VY L+N Y ++ + ++M +G+
Sbjct: 543 GYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 602
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
TI YN +++ ++ G HEM E GI +K T+SI+L
Sbjct: 603 STILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 646
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 117/268 (43%), Gaps = 25/268 (9%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y A+++ K +A + +M R + I YN+++ + G SL
Sbjct: 148 PNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSL 207
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+HEM K I+ D YTFSIL+ A +G+ +I M GV + Y +G
Sbjct: 208 LHEMILKNINPDVYTFSILID--ALCKEGKNAKQIFHAM-VQMGVNPNVYSYNIMINGLC 264
Query: 270 KAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKV 326
K D+A+ +LR+ M+H + Y+ +I G L + ++
Sbjct: 265 KCKRVDEAMNLLRE----MLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMN------EM 314
Query: 327 YNRG-------YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
++RG Y ++ +L K ++ A +F + + R + + LID C+ G L
Sbjct: 315 HHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRL 374
Query: 380 HKAETLIYKAQLRGTEPNVRTWYLMATG 407
A+ L ++G +V T+ +M +G
Sbjct: 375 KNAQELFQHLLVKGCCIDVWTYTVMISG 402
>gi|218200516|gb|EEC82943.1| hypothetical protein OsI_27919 [Oryza sativa Indica Group]
Length = 500
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 139/320 (43%), Gaps = 2/320 (0%)
Query: 74 WVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQ 133
W+ +GR + + + + R + ALQ+ W+ ++ + L+ D + L+ AKV
Sbjct: 72 WMGDGRAVHRGHVFHAVNRLRRRRLHRAALQVMEWIMRERPYKLSELDYSYLLEFTAKVH 131
Query: 134 GIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
GI +A S F +P++ + +Y L+ A + A ++MR+ L YN +
Sbjct: 132 GISEAESLFLRIPQEYQNELLYNNLVMACLDLGLIKLAYGYKRKMRELSLPISPYVYNRL 191
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
+ ++ G K + ++ +M+ + T++ILL A + +G+ ++ M+ +
Sbjct: 192 IILHSSPGRQKTISKILAQMKGDRVTPHTSTYNILLKIKANEHNIDGVARVFNDMKRAK- 250
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDV 313
V + Y A + A L + + E M +S + ++ Y G ++
Sbjct: 251 VEPNEITYGILAIAHAVARLYTVSHTYVEAIENSMTGTNWS-TLEILLILYGYHGKAKEL 309
Query: 314 LRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAY 373
W + + + +I I + K ++ AE+I+ ++ES N ++ Y
Sbjct: 310 KMTWDLMQGLPHIRPKSFILAIEAFGKVGSIDQAEEIWGKFESTRKPKLTEQFNSILSVY 369
Query: 374 CRRGLLHKAETLIYKAQLRG 393
CR GL+ KA + + + G
Sbjct: 370 CRHGLVDKASAVFKEMRANG 389
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 111/266 (41%), Gaps = 25/266 (9%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y A+++ A+ + +M+D+G+ + Y+ M+N + +G + + L+ EM
Sbjct: 154 IYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEM 213
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ I D TFS L++A D ++ M GV + T G +G
Sbjct: 214 LVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM-ISSGVCPNVVTCNTLLDGLCDSGK 272
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
AL + + + MM + A++ V + +++ YN
Sbjct: 273 LKDALEMFKAMQKSMMDIDATHAFNGV--------------------EPDVQTYN----I 308
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+IS L+ AE+++EE R + D + +I+ C++ L +A + +
Sbjct: 309 LISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKS 368
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVE 419
PN+ T+ + TGY + + G+E
Sbjct: 369 FSPNIVTFNTLITGYCKAGMVDDGLE 394
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 13/255 (5%)
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEG 240
G + +N++++ + L H+M + + TF+ L++ C E
Sbjct: 45 GFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKPNV----VTFTTLMNGLCREGRVVEA 100
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
+ + M+E G+ + Y T G K G + AL +LRK E L Y +
Sbjct: 101 VALLDRMVE--DGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAI 158
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNR--GYICVISSLLKFDGMESAEKIFEEWESRN 358
I G D ++ Q+ ++ Y C+I+ A+++ +E R
Sbjct: 159 IDGLWKDGRHTDAQNLFIEM-QDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRK 217
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
+ D+ + LI+A + G L+ A+ L+ + G PNV T + G + + + +
Sbjct: 218 ISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDAL 277
Query: 419 E---AMKKALVLLEA 430
E AM+K+++ ++A
Sbjct: 278 EMFKAMQKSMMDIDA 292
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+AE + ++M RG+V T+ Y+SM+N + + + M K + TF+ L+
Sbjct: 321 EAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLI 380
Query: 230 SA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
+ C A +G++ M RG+V + Y T G+ K G + +L + ++
Sbjct: 381 TGYCKAGMVDDGLELFCEM--GRRGIVANAITYITLIRGFRKVGNINGSLDIFQE 433
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 133/303 (43%), Gaps = 23/303 (7%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D K ++A + + + + P Y L+NA+ AK + + ++M+++
Sbjct: 96 IDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNC 155
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
I Y+ +++ + G +K + +M+ +G + +T++ ++ + +DK
Sbjct: 156 SPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGH---VDK 212
Query: 244 IVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK--SEVLMM-HNKFSRAYD 298
+ E G+V VY + G ++G +D A + R+ S+ L H F+
Sbjct: 213 AFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTS--- 269
Query: 299 FVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNRGYICVISSLLKFDGMESAEKIFEE 353
++ G + R+++ + ++ +YN +I +L K ++ A +IF E
Sbjct: 270 -LVYGLGVAGRASEARRIFQEARDVGCALDVNLYN----VLIDTLCKSKRLDEAWEIFGE 324
Query: 354 WESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
E L D+ N L+D C+ G +H A L+ + G P+V + + G ++ +
Sbjct: 325 LEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGR 384
Query: 414 SEK 416
E+
Sbjct: 385 VEE 387
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 129/326 (39%), Gaps = 42/326 (12%)
Query: 79 RPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQA 138
RP D +++ F+ KR ++ M + N +I +D + K G+E+A
Sbjct: 121 RP-DTYTFNVLMNAFKKAKRVDSVWKLFEEM-QNQNCSPNVITYSILIDAVCKCGGVEKA 178
Query: 139 ASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNV 196
F + + P++ Y ++++ + +KA + ++M GLV + YNS+++
Sbjct: 179 LKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHG 238
Query: 197 YYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA-DRGVV 255
++G L EM KG+ D TF+ L+ A +I EA D G
Sbjct: 239 LGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRI--FQEARDVGCA 296
Query: 256 LDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLR 315
LD +Y K+ D+A + + E +D ++
Sbjct: 297 LDVNLYNVLIDTLCKSKRLDEAWEIFGELE------------------------EDGLV- 331
Query: 316 VWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
++ +N ++ L K + A + + + D+ + N LID +
Sbjct: 332 ------PDVYTFN----ALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRK 381
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTW 401
G + +A L+ + Q G EP+V T+
Sbjct: 382 SGRVEEAGQLLLEMQSLGYEPDVVTY 407
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
Query: 255 VLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVL 314
+L ++ A GY AGL +K++ L++ E S AY+ +I + G L
Sbjct: 51 ILQPRIFIELARGYASAGLLEKSVEALKRMEGHRCALTAS-AYNSLIDAFVKAGYTQKAL 109
Query: 315 RVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAY 373
V++ Q+ L+ + ++++ K ++S K+FEE +++N ++ + LIDA
Sbjct: 110 AVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAV 169
Query: 374 CRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
C+ G + KA + + RG PN+ T+ M G ++ +K
Sbjct: 170 CKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDK 212
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 117/299 (39%), Gaps = 40/299 (13%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P ++I L YA A EK+ +++M YNS+++ + + G +K ++
Sbjct: 54 PRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYR 113
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME---------------------- 249
M + G+ D YTF++L++A A + + K+ M+
Sbjct: 114 VMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCG 173
Query: 250 ------------ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK--SEVLMMHNKFSR 295
RG + Y + G K+G DKA + + SE L+
Sbjct: 174 GVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRV--- 230
Query: 296 AYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
Y+ +I G D ++++ + L+ + + ++ L A +IF+E
Sbjct: 231 VYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEA 290
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
D+ + N LID C+ L +A + + + G P+V T+ + G ++ +
Sbjct: 291 RDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGR 349
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 68/156 (43%), Gaps = 4/156 (2%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDR 181
+ +D + K + +++A F + E +P VY AL++ + A I++ M+
Sbjct: 304 VLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRA 363
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
G YN++++ ++G ++ L+ EM+ G + D T++ L+ + G
Sbjct: 364 GCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLID--ESCKGGRIE 421
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
D + E + Y T +G AG D+A
Sbjct: 422 DALRLFEEISAKGFANTVTYNTILNGLCMAGRVDEA 457
>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 447
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 151/364 (41%), Gaps = 44/364 (12%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+L + ++ G P L +IK L + AL + + F L ++ +
Sbjct: 115 VLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG-FQLNQVGYGTLINGV 173
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
K+ A + +L P V Y +++A + +A + +M +G+
Sbjct: 174 CKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 233
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVA 246
+ YN+++ + G K+ L++ M K I+ D YT++IL+ A C E +I
Sbjct: 234 VTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISY 293
Query: 247 MMEA-----DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVI 301
+ + DRG D Y++ G K G D+A+A+ K M ++ R F
Sbjct: 294 VWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNK-----MKDQGIRPNMFTF 348
Query: 302 TQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
T ++ L K ++ A+++F++ ++
Sbjct: 349 T------------------------------ILLDGLWKGGRLKDAQEVFQDLLTKGYHL 378
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
++ N +I+ +C++GLL +A T++ K + G PN T+ + + ++++K + +
Sbjct: 379 NVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLL 438
Query: 422 KKAL 425
++ +
Sbjct: 439 RQMI 442
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 22/228 (9%)
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVA 246
I +N +++ + + +Y + SL H +E KGI D +T +IL++ C G +
Sbjct: 60 IQFNKILDSFAKMKHYSTV-SLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAK 118
Query: 247 MMEADRG-----VVLDWTVYATAASGYVKAGL--SDKALAV-LRKSEVLMMHNKFSRAYD 298
+++ RG V L+ + G VK L DK LA + ++V Y
Sbjct: 119 ILK--RGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQV---------GYG 167
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
+I G+ +++ K+ L K Y +I +L K+ + A +F E +
Sbjct: 168 TLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVK 227
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
+ D+ N LI +C G L +A L+ L+ P+V T+ ++
Sbjct: 228 GISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILV 275
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 118/293 (40%), Gaps = 18/293 (6%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
SVY AL+N + + +M +M ++G+ I Y++++N +G + SL+ +
Sbjct: 246 SVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQ 305
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTV--YATAASGYVK 270
M ++G + +T S L+ C G D + + RG L V Y T G+
Sbjct: 306 MLKRGCHPNIHTLSSLVKGCFV--RGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCS 363
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-----KQNLK 325
G DKA++V E + R Y +I + G+ + + +W + N+
Sbjct: 364 HGNIDKAVSVFLHMEEIGCSPNI-RTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVV 422
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
VY ++ +L + + AE + E N + N I C G L AE +
Sbjct: 423 VYTS----MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 478
Query: 386 IYK-AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPS 437
+ Q PN+ T+ + G + N+ E EA + G W S
Sbjct: 479 FRQMEQQYRCPPNIVTYNELLDGLAKANRIE---EAYGLTREIFMRGVEWSTS 528
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 59/306 (19%), Positives = 123/306 (40%), Gaps = 38/306 (12%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++I++++ Y AE+A + ++++ G YN +++ + + + +M
Sbjct: 112 LFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDM 171
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAAS-----GY 268
+ G + + +T+++LL A + +G K++ M +++G + Y T S G
Sbjct: 172 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEM-SNKGCCPNAVSYTTVISSMCEVGM 230
Query: 269 VKAG--LSDKALAVLR---------------KSEVLMMHNKFSRAYDFVITQYAA----C 307
VK G L+++ V+ K V +M + + Y+
Sbjct: 231 VKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINEL 290
Query: 308 GNKDDVLRVWKRYKQNLKVYNRGYICVISSLLK--------FDGMESAEKIFEEWESRNL 359
N + + Q LK I +SSL+K FD ++ ++ + L
Sbjct: 291 SNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGF---GL 347
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
++ N L+ +C G + KA ++ + G PN+RT+ + G+ + E V
Sbjct: 348 QPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVY 407
Query: 420 AMKKAL 425
K L
Sbjct: 408 IWNKML 413
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 111/266 (41%), Gaps = 25/266 (9%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y A+++ A+ + +M+D+G+ + Y+ M+N + +G + + L+ EM
Sbjct: 154 IYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEM 213
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ I D TFS L++A D ++ M GV + T G +G
Sbjct: 214 LVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM-ISSGVCPNVVTCNTLLDGLCDSGK 272
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
AL + + + MM + A++ V + +++ YN
Sbjct: 273 LKDALEMFKAMQKSMMDIDATHAFNGV--------------------EPDVQTYN----I 308
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+IS L+ AE+++EE R + D + +I+ C++ L +A + +
Sbjct: 309 LISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKS 368
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVE 419
PN+ T+ + TGY + + G+E
Sbjct: 369 FSPNIVTFNTLITGYCKAGMVDDGLE 394
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 13/255 (5%)
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEG 240
G + +N++++ + L H+M + + TF+ L++ C E
Sbjct: 45 GFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKPNV----VTFTTLMNGLCREGRVVEA 100
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
+ + M+E G+ + Y T G K G + AL +LRK E L Y +
Sbjct: 101 VALLDRMVE--DGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAI 158
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNR--GYICVISSLLKFDGMESAEKIFEEWESRN 358
I G D ++ Q+ ++ Y C+I+ A+++ +E R
Sbjct: 159 IDGLWKDGRHTDAQNLFIEM-QDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRK 217
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
+ D+ + LI+A + G L+ A+ L+ + G PNV T + G + + + +
Sbjct: 218 ISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDAL 277
Query: 419 E---AMKKALVLLEA 430
E AM+K+++ ++A
Sbjct: 278 EMFKAMQKSMMDIDA 292
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+AE + ++M RG+V T+ Y+SM+N + + + M K + TF+ L+
Sbjct: 321 EAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLI 380
Query: 230 SA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
+ C A +G++ M RG+V + Y T G+ K G + +L + ++
Sbjct: 381 TGYCKAGMVDDGLELFCEM--GRRGIVANAITYITLIRGFRKVGNINGSLDIFQE 433
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 145/377 (38%), Gaps = 92/377 (24%)
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
AIRL ++ +EQ NC P+ + +Y +++++ + +A + QM +G
Sbjct: 180 AIRL-----LRSMEQG----NCQPDVV----IYTSIIDSLCKDRQVTEAFNLFSQMVGQG 226
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ Y S+++ +K + +L+++M I D FS ++ A
Sbjct: 227 ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAH 286
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDF 299
+IV MM RGV D Y T G+ D+A+ V +M+ F+ +Y
Sbjct: 287 EIVDMM-IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFD----MMVRKGFAPDVISYTT 341
Query: 300 VITQYAACGNKDDVLRVW-----KRYKQNLKVYN------------------------RG 330
+I Y D + ++ K + + K YN RG
Sbjct: 342 LINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARG 401
Query: 331 -------YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
Y ++ SL K +E A + + E+ NL DI++ N +ID CR G L A
Sbjct: 402 QMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAAR 461
Query: 384 TLIYKAQLRGTEPNVRTWYLM-----------------------------------ATGY 408
L +G P+V T+ +M A G+
Sbjct: 462 DLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGF 521
Query: 409 LQNNQSEKGVEAMKKAL 425
LQNN++ + ++ +++ L
Sbjct: 522 LQNNETLRAIQLLEEML 538
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 64/370 (17%), Positives = 138/370 (37%), Gaps = 53/370 (14%)
Query: 97 KRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKL----- 151
K +S L +S T+ +F + P + + LI + + F+ + + LKL
Sbjct: 70 KHYSTVLSLS---TQMDSFGVPPNVYTLNI-LINSFCHLNRVGFAFSVLAKILKLGHQPD 125
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P+ + L+ +A + +M D G + Y +++N + GN L+
Sbjct: 126 PTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLR 185
Query: 212 EMEE-----------------------------------KGIDCDKYTFSILLSACAAAS 236
ME+ +GI D +T++ L+ A
Sbjct: 186 SMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLC 245
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR- 295
+ + + ++ M + ++ D +++T K G +A ++ +M+
Sbjct: 246 EWKHVTTLLNQM-VNSKILPDVVIFSTVVDALCKEGKVTEAHEIVD----MMIQRGVEPD 300
Query: 296 --AYDFVITQYAACGNKDDVLRVWK-RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
Y ++ + D+ ++V+ ++ Y +I+ K ++ A +FE
Sbjct: 301 VVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFE 360
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
E + D + N L+ C G L A L ++ RG P++ T+ ++ +N
Sbjct: 361 EMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNC 420
Query: 413 QSEKGVEAMK 422
E+ + +K
Sbjct: 421 HLEEAMALLK 430
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 38/266 (14%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVK-KTIDYNSMMNVYYQTGNYKKLDSLMHEMEE 215
AL++A A +AE + + G +K +T YN+++ Y + G+ K + ++ EM +
Sbjct: 268 ALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQ 327
Query: 216 KGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
G+ D+ T+S+L+ A A E ++ MEAD GV V++ +G+ G
Sbjct: 328 CGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD-GVKPSSYVFSRILAGFRDRGDWQ 386
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVI 335
KA AVLR+ + A G + D Y +I
Sbjct: 387 KAFAVLREMQ--------------------ASGVRPD---------------RHFYNVMI 411
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
+ K++ + A F + + D+ N LIDA+C+ G +A L + +
Sbjct: 412 DTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCP 471
Query: 396 PNVRTWYLMATGYLQNNQSEKGVEAM 421
P T+ +M L + +GVEAM
Sbjct: 472 PGTTTYNIM-INLLGEQEHWEGVEAM 496
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 108/269 (40%), Gaps = 3/269 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ALL Y S + AE ++ +M G+ Y+ +++ Y + G ++ L+ EME
Sbjct: 302 YNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEME 361
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
G+ Y FS +L+ D + ++ M+A GV D Y + K
Sbjct: 362 ADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQAS-GVRPDRHFYNVMIDTFGKYNCL 420
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYIC 333
A+ K + ++ +I + G D +++ ++ N Y
Sbjct: 421 GHAMDAFNKMREEGIEPDVV-TWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNI 479
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+I+ L + + E E + E + + L +I L+D Y R G +A I + G
Sbjct: 480 MINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADG 539
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+P+ ++ + Y Q ++ + +K
Sbjct: 540 LKPSPTMYHALVNAYAQRGLADHALNVVK 568
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
NC P + Y ++N + E E ++ +M+++GLV I Y ++++VY ++G
Sbjct: 469 NCPPGT----TTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGR 524
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
YK+ + M+ G+ + L++A A + +V M+AD
Sbjct: 525 YKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKAD 573
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/169 (18%), Positives = 74/169 (43%), Gaps = 3/169 (1%)
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV 316
D +++ S + +A L D AL +L ++ + + + S A +I+ G + +
Sbjct: 227 DAPLFSDLISAFARAALPDAALELLASAQAIGLTPR-SNAVTALISALGTAGRVAEAEAL 285
Query: 317 WKRY--KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
+ + +K R Y ++ ++ +++AE++ +E + D + L+DAY
Sbjct: 286 FLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYT 345
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
R G A L+ + + G +P+ + + G+ +K +++
Sbjct: 346 RAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLRE 394
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P++Y AL+NAYA A+ A +++ M+ GL + NS++N + + + S++
Sbjct: 544 PTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQ 603
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
M E G+ D T++ L+ A E DK+ + E
Sbjct: 604 FMRENGLRPDVITYTTLMKALIRV---EQFDKVPVIYE 638
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 146/342 (42%), Gaps = 60/342 (17%)
Query: 120 ADVAIRLD-----LIAKVQGIEQ----AASYFNCVP-EKLKLP-SVYIALLNAYACAKSA 168
+D +RLD L+ ++ G E A+ F+ +P EK L Y +L++YA
Sbjct: 172 SDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKY 231
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEEKGIDCDKYTFSI 227
++A + +M++ GL + YN M++VY + G ++ ++ L+ EM KG++ D++T S
Sbjct: 232 KRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCST 291
Query: 228 LLSACAAASDGEGIDKIVAMME----------------------------------ADRG 253
++SAC + K +A ++ D
Sbjct: 292 VISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNN 351
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDD 312
D Y A+ YV+AG D+ +AV+ + +M N + Y VI Y G +DD
Sbjct: 352 CPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAIT--YTTVIDAYGKAGREDD 409
Query: 313 VLRVWKRYKQ-----NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
LR++ K N+ YN V++ L K E K+ E + N C R
Sbjct: 410 ALRLFSLMKDLGCAPNVYTYNS----VLAMLGKKSRTEDVIKVLCEMK-LNGCAPNRATW 464
Query: 368 HLIDAYC-RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+ + A C G + ++ + + G EP+ T+ + + Y
Sbjct: 465 NTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAY 506
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 123/301 (40%), Gaps = 41/301 (13%)
Query: 163 ACAKSA--EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
AC + ++A + +++ G T+ YNSM+ V+ + G Y + S++ EME+
Sbjct: 295 ACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPP 354
Query: 221 DKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKAL- 278
D T++ L + A EG+ I M +GV+ + Y T Y KAG D AL
Sbjct: 355 DSVTYNELAATYVRAGFLDEGMAVIDTM--TSKGVMPNAITYTTVIDAYGKAGREDDALR 412
Query: 279 ------------AVLRKSEVLMMHNKFSRAYDFVI------------------TQYAAC- 307
V + VL M K SR D + T A C
Sbjct: 413 LFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCS 472
Query: 308 --GNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
G + V +V + K + + +IS+ + + K++ E +
Sbjct: 473 EEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVT 532
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
N L++A RRG AE++I + +G +PN ++ L+ Y + KG+E ++K
Sbjct: 533 TYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNV-KGIEKVEKE 591
Query: 425 L 425
+
Sbjct: 592 I 592
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 122/290 (42%), Gaps = 51/290 (17%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
NC E K + L++AYA S + + +M G YN+++N + G+
Sbjct: 489 NCGFEPDK--DTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGD 546
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
+K +S++ +M KG ++ ++S+LL + A + +GI+K+ + D V W +
Sbjct: 547 WKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEI-YDGHVFPSWILLR 605
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDV------LRV 316
T L++ LR E RA+D Q G K D+ L +
Sbjct: 606 TLV-------LTNHKCRHLRGME---------RAFD----QLQKYGYKPDLVVINSMLSM 645
Query: 317 WKRYK------------------QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
+ R K NL YN C++ ++ AE++ + ++
Sbjct: 646 FARNKMFSKAREMLHFIHECGLQPNLFTYN----CLMDLYVREGECWKAEEVLKGIQNSG 701
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
D+ N +I +CR+GL+ +A ++ + +G +P + T+ +GY
Sbjct: 702 PEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGY 751
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 57/311 (18%), Positives = 123/311 (39%), Gaps = 50/311 (16%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y +++AY A + A + M+D G YNS++ + + + + ++ EM
Sbjct: 393 TYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEM 452
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ G ++ T++ +L+ C+ ++K++ M+ + G D + T S Y + G
Sbjct: 453 KLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMK-NCGFEPDKDTFNTLISAYARCGS 511
Query: 274 ---SDKALAVLRKSEVL-------MMHNKFSR------------------------AYDF 299
S K + KS + N +R +Y
Sbjct: 512 EVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSL 571
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLL--------KFDGMESAEKIF 351
++ Y+ GN + +V K ++Y+ G++ LL K + E+ F
Sbjct: 572 LLHCYSKAGNVKGIEKVEK------EIYD-GHVFPSWILLRTLVLTNHKCRHLRGMERAF 624
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
++ + D+ + N ++ + R + KA +++ G +PN+ T+ + Y++
Sbjct: 625 DQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVRE 684
Query: 412 NQSEKGVEAMK 422
+ K E +K
Sbjct: 685 GECWKAEEVLK 695
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++ Y KAE +++ +++ G + YN+++ + + G ++ ++ EM
Sbjct: 673 TYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEM 732
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
KGI T++ LS A + ++++ M + Y GY KAG
Sbjct: 733 TTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFM-IEHNCRPSELTYKILVDGYCKAGK 791
Query: 274 SDKALAVLRK 283
++A+ + K
Sbjct: 792 YEEAMDFVSK 801
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 155/357 (43%), Gaps = 14/357 (3%)
Query: 68 VPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR-- 125
V L+D+ V G D+ ++ L KR L +S+ KK A+V I
Sbjct: 206 VALIDRMVARGCQPDLFTYGTVVNG--LCKRGDIDLALSLL--KKMEKGKIEANVVIYNT 261
Query: 126 -LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRG 182
+D + K + ++ A FN + K P V Y +L++ A ++ M +R
Sbjct: 262 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ + +NS+++ + + G + + L EM ++ ID + T++ L++ +
Sbjct: 322 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 381
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVI 301
+I +M + + D Y T G+ KA ++ + + R+ S+ ++ N + Y+ +I
Sbjct: 382 QIFTLM-VSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT--YNTLI 438
Query: 302 TQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
G+ D +++K+ + Y ++ L K+ +E A +FE + +
Sbjct: 439 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 498
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+I N +I+ C+ G + L L+G +PNV + M +G+ + E+
Sbjct: 499 PNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 555
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 147/366 (40%), Gaps = 32/366 (8%)
Query: 68 VPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKS------------NF 115
V L+DQ VE G D +I L+ + S A+ + M + N
Sbjct: 171 VALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 230
Query: 116 VLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIM 175
+ D+ + L L+ K +E+ N V +Y +++ K + A +
Sbjct: 231 LCKRGDIDLALSLLKK---MEKGKIEANVV--------IYNTIIDGLCKYKHMDDAFDLF 279
Query: 176 QQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAA 235
+M +G+ YNS+++ G + L+ +M E+ I+ + TF+ L+ A A
Sbjct: 280 NKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKE 339
Query: 236 SDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF-- 293
+K+ M R + + Y + +G+ D+A + LM+
Sbjct: 340 GKLIEAEKLFDEM-IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF----TLMVSKDCLP 394
Query: 294 -SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIF 351
Y+ +I + ++ + +++ Q V N Y +I L + + A+KIF
Sbjct: 395 DVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 454
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
++ S + DI + L+D C+ G L KA + Q EPN+ T+ +M G +
Sbjct: 455 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKA 514
Query: 412 NQSEKG 417
+ E G
Sbjct: 515 GKVEDG 520
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 118/272 (43%), Gaps = 11/272 (4%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
+LLN Y K +A ++ QM + G T+ +N++++ + + +L+ M +
Sbjct: 156 SLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVAR 215
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
G D +T+ +++ D + ++ ME + + + +Y T G K D
Sbjct: 216 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK-IEANVVIYNTIIDGLCKYKHMDD 274
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLR-----VWKRYKQNLKVYNRGY 331
A + K E + Y+ +I+ G D R + ++ N+ +N
Sbjct: 275 AFDLFNKMETKGIKPDVF-TYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNS-- 331
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I + K + AEK+F+E R++ +I N LI+ +C L +A+ +
Sbjct: 332 --LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 389
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ P+V T+ + G+ + + E+G+E ++
Sbjct: 390 KDCLPDVVTYNTLIKGFCKAKRVEEGMELFRE 421
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 124/303 (40%), Gaps = 44/303 (14%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D AK + +A F+ + ++ P++ Y +L+N + ++A+ I M +
Sbjct: 333 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 392
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ + YN+++ + + ++ L EM ++G+ + T++ L+ A D + K
Sbjct: 393 LPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 452
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV---LRKSEVLMMHNKFSRAYDFV 300
I M +D GV D Y+ G K G +KAL V L+KS++
Sbjct: 453 IFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM-------------- 497
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
+ N+ YN +I + K +E +F + +
Sbjct: 498 --------------------EPNIYTYN----IMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
++ I +I +CR+GL +A+ L + + GT P+ + + L++ E
Sbjct: 534 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAEL 593
Query: 421 MKK 423
+K+
Sbjct: 594 IKE 596
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 102/254 (40%), Gaps = 46/254 (18%)
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVA 246
I+++ +++ + + + SL +M+ GI + YT+SILL+ C + + +
Sbjct: 82 IEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGK 141
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS----------------EVLMMH 290
MM+ G D ++ +GY +A+A++ + L +H
Sbjct: 142 MMKL--GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLH 199
Query: 291 NKFSRA------------------YDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVY 327
NK S A Y V+ G+ D L + K+ ++ N+ +Y
Sbjct: 200 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIY 259
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
N +I L K+ M+ A +F + E++ + D+ N LI C G A L+
Sbjct: 260 NT----IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLS 315
Query: 388 KAQLRGTEPNVRTW 401
R PNV T+
Sbjct: 316 DMIERKINPNVVTF 329
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 135/314 (42%), Gaps = 19/314 (6%)
Query: 118 TPADVAIR---LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEII 174
+P D+ + +D+ +K + A F +P +K + ++L A S + A
Sbjct: 177 SPVDLILGGALVDMYSKCGDLCMARRCFEMMP--IKSVVSWTSMLCAQTKHGSVDAARCW 234
Query: 175 MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAA 234
M +R T+ +N+M++ Y Q G Y + L +M+ G D+ T +LSAC
Sbjct: 235 FDHMPER----NTVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGR 290
Query: 235 ASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
D + K+V + D D ++ + Y K G D A+ + R+ M N+
Sbjct: 291 IGD-LTVGKMVHLYIRDNIHNPDISLINSLLDMYAKCGQVDTAIRLFRE-----MCNRNV 344
Query: 295 RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
+++ +I A G D + ++ +N ++ ++SS +E+ + FE
Sbjct: 345 VSWNVIIGGLAMHGRALDAITFFRSMVRNTSPDGITFVALLSSCSHGGLLETGQHYFESM 404
Query: 355 ES-RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
N+ H++ ++D RRG L KA LI + ++ P+V W + +
Sbjct: 405 RHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMK---PDVVVWGALLGACRIHGN 461
Query: 414 SEKGVEAMKKALVL 427
+ G + +K+ L L
Sbjct: 462 VKIGKQVIKQLLEL 475
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
ALL++YA A S + +M R +V +NSM+ Y Q G+ ++ +L EM +
Sbjct: 85 ALLHSYASAGSLGDSRRFFDEMAGRNVVS----WNSMIGGYAQAGDTREACALFGEMRRQ 140
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
G D++T + LL AC+ + E ++V + G +D + Y K G
Sbjct: 141 GFLGDEFTLASLLLACSQEGNLE-FGRLVHCLMLVSGSPVDLILGGALVDMYSKCG 195
>gi|169844619|ref|XP_001829030.1| hypothetical protein CC1G_01710 [Coprinopsis cinerea okayama7#130]
gi|116509770|gb|EAU92665.1| hypothetical protein CC1G_01710 [Coprinopsis cinerea okayama7#130]
Length = 674
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
SVY +L+ + ++A+ I+++MR G + YN + +++ G++ ++ ++ +
Sbjct: 397 SVYNTVLDGLLMNRVVDQAKRILEEMRINGPAPDAVTYNIFLGYFHRRGDFAEIGKMLSQ 456
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M+++ + D YTFSILL+A A + +D +V M DRG+ + +Y T ++K
Sbjct: 457 MDKERVVGDVYTFSILLTALLRAGRPDAVDVVVQHMN-DRGIKANVAIYTTLIEEHLKMR 515
Query: 273 LSDKALAVLR 282
+AV++
Sbjct: 516 TESSLIAVMK 525
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 127/269 (47%), Gaps = 27/269 (10%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH--EMEEKGIDCDKYTFSI 227
+A+ I +M RG++ + ++S++ V + G+ + +LMH EME GI D ++I
Sbjct: 380 EAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQ--ALMHFREMERSGIVPDNVIYTI 437
Query: 228 LLSA-C--AAASDGEGI-DKIVAMMEADRGVVLDWTVYATAASGYVKAGL-SDKALAVLR 282
L+ C A SD + D+++A RG +D Y T +G K + +D +
Sbjct: 438 LIDGFCRNGALSDALKMRDEMLA-----RGCFMDVVTYNTFLNGLCKKKMFADADMLFNE 492
Query: 283 KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK-RYKQNLKVYNRGYICVISSLLKF 341
E M+ + ++ + +I Y GN D L +++ + NLK Y +I K
Sbjct: 493 MVERGMVPDFYT--FTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKA 550
Query: 342 DGMESAEKIFEEWESRNLCHDIRIPNHL-----IDAYCRRGLLHKAETLIYKAQLRGTEP 396
M A++++++ +++ IP+H+ ++ +C GLL +A L + +G P
Sbjct: 551 GEMGRAKELWDDMIRKDI-----IPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP 605
Query: 397 NVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
N+ T + GY ++ K E + K +
Sbjct: 606 NLVTCNTLIKGYCRSGDMPKAYEYLSKMI 634
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 134/312 (42%), Gaps = 23/312 (7%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+ ++A+ + QA +F + +P +Y L++ + + A + +M RG
Sbjct: 404 IGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGC 463
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ YN+ +N + + D L +EM E+G+ D YTF+ L+ DG +DK
Sbjct: 464 FMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIR--GYCKDGN-MDK 520
Query: 244 IVAMMEADRGVVL--DWTVYATAASGYVKAGLSDKALAV---LRKSEVLMMHNKFSRAYD 298
+ + EA L D Y T G+ KAG +A + + + +++ H +Y
Sbjct: 521 ALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDH----ISYG 576
Query: 299 FVITQYAACGNKDDVLRVW-----KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEE 353
V+ + + G + L + K + NL N +I + M A + +
Sbjct: 577 TVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCN----TLIKGYCRSGDMPKAYEYLSK 632
Query: 354 WESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
S + D N LID Y + L KA LI + + RG + N+ T+ L+ G+ +
Sbjct: 633 MISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGK 692
Query: 414 SEKGVEAMKKAL 425
++ + ++K +
Sbjct: 693 MQEAEQVLRKMI 704
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 107/263 (40%), Gaps = 11/263 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y L+ Y AK + Q +R +G+ N ++ +TG + E+
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
GI+ + YT +I+++A E + ++ ME +GV D Y T + Y + GL
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG-KGVFADIVTYNTLINAYCREGL 307
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYN 328
++A +L M Y+ ++ G D V Q N YN
Sbjct: 308 VEEAFQLLNSFSSRGMEPGL-LTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
++ + + D + A++IF+E R + D+ + LI R G L++A +
Sbjct: 367 ----TLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFRE 422
Query: 389 AQLRGTEPNVRTWYLMATGYLQN 411
+ G P+ + ++ G+ +N
Sbjct: 423 MERSGIVPDNVIYTILIDGFCRN 445
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 108/286 (37%), Gaps = 45/286 (15%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+NAY E+A ++ RG+ + YN+++ + G Y + ++ EM
Sbjct: 295 YNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEML 354
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ G+ + T++ LL + +I M + RGV+ D +++ + G
Sbjct: 355 QLGLTPNAATYNTLLVEICRRDNILEAQEIFDEM-SRRGVLPDLVSFSSLIGVLARNGHL 413
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
+AL R+ E + + N Y +
Sbjct: 414 YQALMHFREME-----------------------------------RSGIVPDNVIYTIL 438
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I + + A K+ +E +R D+ N ++ C++ + A+ L + RG
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTR--WKPSK 438
P+ T+ + GY ++ M KAL L EA R KP K
Sbjct: 499 VPDFYTFTTLIRGYCKDGN-------MDKALNLFEAMVRTNLKPDK 537
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
L+ Y + KA + +M G++ + YN++++ Y + N +K L++EME++
Sbjct: 612 TLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR 671
Query: 217 GIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
G+ + T++++L+ CA E + M+E G+ D Y++ +G+V
Sbjct: 672 GLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEI--GINPDGATYSSLINGHV 723
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ Y + EKA I++ +M RGL I YN ++N + G ++ + ++ +M
Sbjct: 645 YNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMI 704
Query: 215 EKGIDCDKYTFSILLSA 231
E GI+ D T+S L++
Sbjct: 705 EIGINPDGATYSSLING 721
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%)
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
++++L K E+ + E + + DI N LI+AYCR GL+ +A L+ RG
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVL 427
EP + T+ + G + + ++ + + + L L
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL 356
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 127/291 (43%), Gaps = 38/291 (13%)
Query: 135 IEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+E A +Y + + ++ +P+ Y L++ E AEI+++++R++G+V ++ YN
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
++N Y Q G+ KK +L EM GI ++T++ L+ + D++ + +
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKV-VGK 461
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD 312
G+ D + T G+ G D+A ++L++ +++ + N DD
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSI-------------------NPDD 502
Query: 313 VLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
V YN C++ L E A ++ E + R + D N LI
Sbjct: 503 V------------TYN----CLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISG 546
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
Y ++G A + + G P + T+ + G +N + E E +++
Sbjct: 547 YSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLRE 597
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 138/314 (43%), Gaps = 26/314 (8%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+A ++++M++ GLV ++ YN ++ G+ + + EM ++G+ YT++ L+
Sbjct: 310 RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLI 369
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
+ E + ++ + ++G+VLD Y +GY + G + KA A+ + +M
Sbjct: 370 HGLFMENKIEAAEILIREIR-EKGIVLDSVTYNILINGYCQHGDAKKAFAL---HDEMMT 425
Query: 290 HNKFSRAYDFVITQYAAC-GNK----DDVLR--VWKRYKQNLKVYNR---GYICVISSLL 339
+ + Y C NK D++ V K K +L + N G+ C I +
Sbjct: 426 DGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGH-CAIGN-- 482
Query: 340 KFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVR 399
M+ A + +E + ++ D N L+ C G +A L+ + + RG +P+
Sbjct: 483 ----MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 538
Query: 400 TWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADY 459
++ + +GY + ++ + L L + P+ A L K ++ E A+
Sbjct: 539 SYNTLISGYSKKGDTKHAFMVRDEMLSL-----GFNPTLLTYNALLKGLSKNQEGELAEE 593
Query: 460 FIKLLTGKEIISAD 473
++ + + I+ D
Sbjct: 594 LLREMKSEGIVPND 607
>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
Length = 871
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 116/286 (40%), Gaps = 32/286 (11%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y +LL+AY +A A I+ +M +G + YN ++ ++ G + + L+ M
Sbjct: 393 TYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERM 452
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL----------------- 256
EKG D + +I++ + + IV M + + L
Sbjct: 453 SEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSS 512
Query: 257 -----DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK----FSRAYDFVITQYAAC 307
D Y+T S K G D+A K ++L M K S YD I Y
Sbjct: 513 KRCLPDRITYSTLVSALCKEGRFDEA-----KKKLLEMIGKDISPDSVLYDTFIHGYCKH 567
Query: 308 GNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
G ++V + K+ K R Y +I + + K+ E + + +C ++
Sbjct: 568 GKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTY 627
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
N LI ++C RG+++KA L+ + PN+ ++ L+ + + +
Sbjct: 628 NSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTS 673
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 118/275 (42%), Gaps = 17/275 (6%)
Query: 151 LPSVYIALLN----AYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKL 206
+P++ + + N + ++AE ++++MRD GL + +N+ ++ + G
Sbjct: 207 MPTMNLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDA 266
Query: 207 DSLMHEMEEK---GID-CDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
+ ++M+EK G+ D+ TF ++LS A + +V +M G + Y
Sbjct: 267 YRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCG-GFLRRVESYN 325
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKR 319
SG V+ G+ +A +LR+ M H S Y+ ++ G DV +V
Sbjct: 326 RWLSGLVRNGMVGEAQELLRE----MAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDF 381
Query: 320 YKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
K + + Y ++ + +A +I +E + + N L+ + + G
Sbjct: 382 VKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGR 441
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
+ +AE L+ + +G + + ++ G +NN+
Sbjct: 442 ITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNK 476
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 99/241 (41%), Gaps = 27/241 (11%)
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ + Y S+++ Y GN + ++ EM +KG + +T+++LL + A +
Sbjct: 387 MTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAE 446
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
+++ M +++G LD TA+ + GL +NK A D V
Sbjct: 447 RLLERM-SEKGYSLD-----TASCNIIIDGLC--------------RNNKLDMAMDIVDG 486
Query: 303 QY-------AACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
+ G L + Y ++S+L K + A+K E
Sbjct: 487 MWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMI 546
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+++ D + + I YC+ G A ++ + +G +P+ RT+ L+ G+ + + S+
Sbjct: 547 GKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSD 606
Query: 416 K 416
+
Sbjct: 607 E 607
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 102/244 (41%), Gaps = 25/244 (10%)
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV-AMM 248
YN ++ Q + ++SL ++ G D +T +ILL A AA E ++ AM
Sbjct: 118 YNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMP 177
Query: 249 EADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG 308
E + + A GY +AG S AL VL + + + V+ + G
Sbjct: 178 ERNE------FSFGILARGYCRAGRSMDALGVLDSMPTMNL-----VVCNTVVAGFCREG 226
Query: 309 NKDDVLRVWKRYKQ-----NLKVYNRGYICVISSLLKFDGMESAEKIF----EEWESRNL 359
D+ R+ +R + N+ +N IS+L K + A +IF E+WE
Sbjct: 227 QVDEAERLVERMRDEGLAPNVVTFN----ARISALCKAGRVLDAYRIFNDMQEKWERGLP 282
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
D + ++ +C G++ +A L+ + G V ++ +G ++N + E
Sbjct: 283 RPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQE 342
Query: 420 AMKK 423
+++
Sbjct: 343 LLRE 346
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 99/269 (36%), Gaps = 44/269 (16%)
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLK--LPS----VYIALLNAYACAKSAEKAEIIMQQM 178
R+ + K + A FN + EK + LP + +L+ + A ++A +++ M
Sbjct: 253 RISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIM 312
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG 238
R G +++ YN ++ + G + L+ EM +G+ + YT++I++
Sbjct: 313 RCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKA 372
Query: 239 EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYD 298
+ K+ +VK+G+ + Y
Sbjct: 373 FDVRKV---------------------EDFVKSGVMTPDVVT----------------YT 395
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESR 357
++ Y + GN R+ Q N Y ++ SL K + AE++ E +
Sbjct: 396 SLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEK 455
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
D N +ID CR L A ++
Sbjct: 456 GYSLDTASCNIIIDGLCRNNKLDMAMDIV 484
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 107/272 (39%), Gaps = 30/272 (11%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
LLN + A ++ QMR G++ M Y + G + + EME G
Sbjct: 189 LLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMG 248
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
++ + + ++ E +I+ ++ +G+ + Y GY K G ++A
Sbjct: 249 LEVNLVAYHAVMDCYCGMGWTEDARRILESLQR-KGLSPNVVTYTLLVKGYCKDGRMEEA 307
Query: 278 LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNRGYI 332
V+++ + AY +I Y G DD RV + NL VYN
Sbjct: 308 ERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNT--- 364
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK----------- 381
+I+ L K ME +K+ +E E + D N LID YCR G + K
Sbjct: 365 -MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRN 423
Query: 382 ---AETLIYKAQLRG------TEPNVRTWYLM 404
A TL Y L+G + +R W+LM
Sbjct: 424 GLAATTLTYNTLLKGFCSLHAIDDALRLWFLM 455
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 109/271 (40%), Gaps = 19/271 (7%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ++N Y + A + +MRD G+ YN+M+N + G +++ ++ EME
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386
Query: 215 EKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ G+ DKY+++ L+ C S + + + M G+ Y T G+
Sbjct: 387 DVGMRPDKYSYNTLIDGYCREGSMRKAFE--MCRMMVRNGLAATTLTYNTLLKGFCSLHA 444
Query: 274 SDKALA---VLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-----YKQNLK 325
D AL ++ K V S D + G + L +WK +N+
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKA----GKTEQALNLWKETLARGLAKNVI 500
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+N VI+ L K M AE++ + + D L D YC+ G L A L
Sbjct: 501 TFNT----VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHL 556
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ K + G P+V + TG+ Q K
Sbjct: 557 MNKMEHLGFAPSVEMFNSFITGHFIAKQWHK 587
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 80/398 (20%), Positives = 148/398 (37%), Gaps = 87/398 (21%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRG-LVKKTIDYNSMMNVYYQTGNYKKLDS 208
P+V Y L+ Y E+AE ++++M++ G +V + Y M+N Y Q G
Sbjct: 286 PNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATR 345
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ +EM + GI + + ++ +++ E + K++ ME D G+ D Y T GY
Sbjct: 346 VRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME-DVGMRPDKYSYNTLIDGY 404
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRA---YDFVITQYAACGNKDDVLRVW-------- 317
+ G KA + R +M+ N + Y+ ++ + + DD LR+W
Sbjct: 405 CREGSMRKAFEMCR----MMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGV 460
Query: 318 -----------------KRYKQNLKVYN----RG-------YICVISSLLKFDGMESAEK 349
+ +Q L ++ RG + VI+ L K M AE+
Sbjct: 461 APNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEE 520
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLL------------------------------ 379
+ + + D L D YC+ G L
Sbjct: 521 LLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHF 580
Query: 380 -----HKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRW 434
HK + + RG PN+ T+ + G+ + EA ++ G
Sbjct: 581 IAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLH---EACNLYFEMVNNGM-- 635
Query: 435 KPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISA 472
P+ +A + + KE ++ A+ ++ L ++I
Sbjct: 636 NPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPG 673
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 12/195 (6%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K I A S F + K LP Y +L++ A + S ++A + M GL
Sbjct: 710 LCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPN 769
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIV 245
I YNS++ ++G + +L ++++ KGI + T++ L+ C E
Sbjct: 770 IITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQ 829
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVIT 302
M+E G+ Y+ G G ++A+ +L + M+ N Y +I
Sbjct: 830 KMVE--EGIQPTVITYSILIYGLCTQGYMEEAIKLLDQ----MIENNVDPNYITYCTLIH 883
Query: 303 QYAACGNKDDVLRVW 317
Y GN +++ +++
Sbjct: 884 GYIKSGNMEEISKLY 898
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 147/354 (41%), Gaps = 25/354 (7%)
Query: 89 IIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQ-----AASYFN 143
++ + RL K++ L I W+ +S+F +DV I +L+ G + +YF
Sbjct: 118 VVVQLRLNKKWDLILLICQWILYRSSF---QSDVMI-FNLVIDAYGRKSLYKMAETTYFE 173
Query: 144 -----CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYY 198
C+P + Y LL AY + EKAE I +MR GL I YN+ ++
Sbjct: 174 LIEARCIPTE----DTYALLLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLM 229
Query: 199 QTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDW 258
+ GN ++ + M+ T+++L++ AS K+ M + + +
Sbjct: 230 KAGNPQRAVEIFQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQK-CKPNI 288
Query: 259 TVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK 318
Y + + + GL +KA + + + H AY+ ++ Y+ G ++
Sbjct: 289 CTYTALVNAFAREGLCEKAEEIFEQLQE-DGHEPDVYAYNALMEAYSRAGFPYGAAEIFS 347
Query: 319 RYKQNLKVYNRGYICVISSLLKFDGM-ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
+ +R ++ G+ E A+ +FEE + + ++ L+ AY + G
Sbjct: 348 LMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAG 407
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAG 431
+ K E ++ + G EP+ M Y + Q K M++ L +E+G
Sbjct: 408 DVAKCEDIVNELHESGLEPDTFVLNSMLNLYGRLGQFGK----MEEVLTAMESG 457
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 139/339 (41%), Gaps = 40/339 (11%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K ++A F + PS Y L+N + A + A + +MR +
Sbjct: 225 IDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKC 284
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
Y +++N + + G +K + + +++E G + D Y ++ L+ A + A G +
Sbjct: 285 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAE 344
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR-----------KSEVLMMHNK 292
I ++M+ G D Y Y + GL + A AV KS +L++ +
Sbjct: 345 IFSLMQ-HMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLL-SA 402
Query: 293 FSRAYDF-----VITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESA 347
+S+A D ++ + G + D + L +Y R L +F M
Sbjct: 403 YSKAGDVAKCEDIVNELHESGLEPDTFVL----NSMLNLYGR--------LGQFGKM--- 447
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
E++ ES DI N LI+ Y R G K E L + +P+V TW
Sbjct: 448 EEVLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQSLAAKNLKPDVVTWTSRLGA 507
Query: 408 YLQNNQSEKGVEAMKKALVLLEAGTR--WKPSKECLAAC 444
Y + K +E ++ +++AG + +K L++C
Sbjct: 508 YSRKKLYTKCLEIFEE---MIDAGCHPDGRTAKVLLSSC 543
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 46/104 (44%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y L+N Y A EK E + Q + + L + + S + Y + Y K + E
Sbjct: 464 STYNILINIYGRAGFFEKMEGLFQSLAAKNLKPDVVTWTSRLGAYSRKKLYTKCLEIFEE 523
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL 256
M + G D T +LLS+C++ E + ++ M + VL
Sbjct: 524 MIDAGCHPDGRTAKVLLSSCSSEDQIEQVTTVIRTMHKNMETVL 567
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 141/313 (45%), Gaps = 47/313 (15%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
++ V IE+A Y+ V ++ +P Y L++ Y ++ EKA+ ++QQM + GL
Sbjct: 535 LSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPN 594
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
Y ++ Y+++ +++K+ S++ M G D + + I++ + + + E ++
Sbjct: 595 ADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLT 654
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK------SEVLMMHNKF------- 293
+E + G+V D +Y++ SG K +KA+ +L + ++ +N
Sbjct: 655 EVEKN-GLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRS 713
Query: 294 ---SRA---YDFVITQ--------YAA-----CGNKDDVLRVWKRYKQNLKVYNRG---- 330
SRA +D ++ + Y A C N D+ + YK L +RG
Sbjct: 714 GDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNG-DITDAFDLYKDML---DRGIAPD 769
Query: 331 ---YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y + + +E A + EE +R H + + + L+ +C+RG L + E L++
Sbjct: 770 AFVYNVLATGCSDAADLEQALFLTEEMFNRGYAH-VSLFSTLVRGFCKRGRLQETEKLLH 828
Query: 388 KAQLRGTEPNVRT 400
R PN +T
Sbjct: 829 VMMDREIVPNAQT 841
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 105/257 (40%), Gaps = 36/257 (14%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +L+ + E+AE Q++ RGLV Y+ +++ Y +T N +K D L+ +M
Sbjct: 528 YNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQML 587
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
G+ + T++ LL ++D E + I+ M G D +Y G+
Sbjct: 588 NSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGS-GDKPDNHIY----------GIV 636
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
+ L+ EV M V+T+ G D L +Y+ +
Sbjct: 637 IRNLSRSENMEVAFM----------VLTEVEKNGLVPD-----------LHIYSS----L 671
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
IS L K ME A + +E L I N LID +CR G + +A + +G
Sbjct: 672 ISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGL 731
Query: 395 EPNVRTWYLMATGYLQN 411
PN T+ + G +N
Sbjct: 732 LPNCVTYTALIDGNCKN 748
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 122/272 (44%), Gaps = 19/272 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY L++ + A +A I+ +M G+ I Y++++ + G + L++EM
Sbjct: 352 VYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEM 411
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ G D +T+ L+ D +G +++ M + G++ + Y +G + G
Sbjct: 412 IKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMR-NSGILPNAYTYGIMINGLCQNGE 470
Query: 274 SDKALAVLRK--SEVLMMHNKFSRAYDFVITQYA-------ACGNKDDVLRVWKRYKQNL 324
S +A +L + SE L N F Y +I ++ AC + +++ + +L
Sbjct: 471 SKEAGNLLEEMISEGLK-PNAF--MYAPLIIGHSKEGHISLACESLENMTKA--NVLPDL 525
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
YN +I L +E AE+ + + + R L D + LI YC+ L KA+
Sbjct: 526 FCYNS----LIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQ 581
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
L+ + G +PN T+ + GY ++N EK
Sbjct: 582 LLQQMLNSGLKPNADTYTDLLEGYFKSNDHEK 613
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 132/312 (42%), Gaps = 25/312 (8%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGL 183
++L+ K++G + A +P P VY L A+ A+ + A+ + ++MR R
Sbjct: 226 MELVWKLKGFMEGAG----IP-----PDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDC 276
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ YN M++ ++G ++ EM + G+ D +T+ L++ +
Sbjct: 277 AMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKA 336
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS-EVLMMHNKFSRAYDFVIT 302
++ M G+ + VYAT G++K G + +A +L + + NK YD +I
Sbjct: 337 LLDEMSCS-GLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKI--MYDNLIR 393
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRG----YICVISSLLKFDGMESAEKIFEEWESRN 358
G + R K + +KV +R Y ++ + + A ++ E +
Sbjct: 394 GLCKIGQ---LGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSG 450
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ---SE 415
+ + +I+ C+ G +A L+ + G +PN + + G+ + +
Sbjct: 451 ILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLAC 510
Query: 416 KGVEAMKKALVL 427
+ +E M KA VL
Sbjct: 511 ESLENMTKANVL 522
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 109/226 (48%), Gaps = 19/226 (8%)
Query: 107 MWMTKKSNFVLTPADVAIRLDLIA---KVQGIEQAASYFNCVPEKLKLPSV--YIALLNA 161
M +T+ L P D+ I LI+ K+ +E+A + + ++ P + Y AL++
Sbjct: 651 MVLTEVEKNGLVP-DLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDG 709
Query: 162 YACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCD 221
+ + +A + + +GL+ + Y ++++ + G+ L +M ++GI D
Sbjct: 710 FCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPD 769
Query: 222 KYTFSILLSACAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAGL---SDK 276
+ +++L + C+ A+D +++ + + E +RG ++++T G+ K G ++K
Sbjct: 770 AFVYNVLATGCSDAAD---LEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQETEK 825
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ 322
L V+ E++ ++ + VIT++ G + RV+ +Q
Sbjct: 826 LLHVMMDREIV----PNAQTVENVITEFGKAGKLCEAHRVFAELQQ 867
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 104/274 (37%), Gaps = 7/274 (2%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+V L++ Y S A ++ M D GL N ++ + + + L
Sbjct: 176 AVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGF 235
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
ME GI D YT+S L A A D + K+ M R ++ Y SG ++G
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRR-RDCAMNEVTYNVMISGLCRSG 294
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN---KDDVLRVWKRYKQNLKVYNR 329
++A E ++ + A+ + C K+ + + LK
Sbjct: 295 AVEEAFGF---KEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVV 351
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y ++ +K A I E S + + + ++LI C+ G L +A L+ +
Sbjct: 352 VYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEM 411
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G P+ T++ + G+ Q+ + E + +
Sbjct: 412 IKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNE 445
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 127/269 (47%), Gaps = 27/269 (10%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH--EMEEKGIDCDKYTFSI 227
+A+ I +M RG++ + ++S++ V + G+ + +LMH EME GI D ++I
Sbjct: 380 EAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQ--ALMHFREMERSGIVPDNVIYTI 437
Query: 228 LLSA-C--AAASDGEGI-DKIVAMMEADRGVVLDWTVYATAASGYVKAGL-SDKALAVLR 282
L+ C A SD + D+++A RG +D Y T +G K + +D +
Sbjct: 438 LIDGFCRNGALSDALKMRDEMLA-----RGCFMDVVTYNTFLNGLCKKKMFADADMLFNE 492
Query: 283 KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK-RYKQNLKVYNRGYICVISSLLKF 341
E M+ + ++ + +I Y GN D L +++ + NLK Y +I K
Sbjct: 493 MVERGMVPDFYT--FTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKA 550
Query: 342 DGMESAEKIFEEWESRNLCHDIRIPNHL-----IDAYCRRGLLHKAETLIYKAQLRGTEP 396
M A++++++ +++ IP+H+ ++ +C GLL +A L + +G P
Sbjct: 551 GEMGRAKELWDDMIRKDI-----IPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP 605
Query: 397 NVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
N+ T + GY ++ K E + K +
Sbjct: 606 NLVTCNTLIKGYCRSGDMPKAYEYLSKMI 634
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 134/312 (42%), Gaps = 23/312 (7%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+ ++A+ + QA +F + +P +Y L++ + + A + +M RG
Sbjct: 404 IGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGC 463
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ YN+ +N + + D L +EM E+G+ D YTF+ L+ DG +DK
Sbjct: 464 FMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIR--GYCKDGN-MDK 520
Query: 244 IVAMMEADRGVVL--DWTVYATAASGYVKAGLSDKALAV---LRKSEVLMMHNKFSRAYD 298
+ + EA L D Y T G+ KAG +A + + + +++ H +Y
Sbjct: 521 ALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDH----ISYG 576
Query: 299 FVITQYAACGNKDDVLRVW-----KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEE 353
V+ + + G + L + K + NL N +I + M A + +
Sbjct: 577 TVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCN----TLIKGYCRSGDMPKAYEYLSK 632
Query: 354 WESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
S + D N LID Y + L KA LI + + RG + N+ T+ L+ G+ +
Sbjct: 633 MISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGK 692
Query: 414 SEKGVEAMKKAL 425
++ + ++K +
Sbjct: 693 MQEAEQVLRKMI 704
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 107/263 (40%), Gaps = 11/263 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y L+ Y AK + Q +R +G+ N ++ +TG + E+
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
GI+ + YT +I+++A E + ++ ME +GV D Y T + Y + GL
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG-KGVFADIVTYNTLINAYCREGL 307
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYN 328
++A +L M Y+ ++ G D V Q N YN
Sbjct: 308 VEEAFQLLNSFSSRGMEPGL-LTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
++ + + D + A++IF+E R + D+ + LI R G L++A +
Sbjct: 367 ----TLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFRE 422
Query: 389 AQLRGTEPNVRTWYLMATGYLQN 411
+ G P+ + ++ G+ +N
Sbjct: 423 MERSGIVPDNVIYTILIDGFCRN 445
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 108/286 (37%), Gaps = 45/286 (15%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+NAY E+A ++ RG+ + YN+++ + G Y + ++ EM
Sbjct: 295 YNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEML 354
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ G+ + T++ LL + +I M + RGV+ D +++ + G
Sbjct: 355 QLGLTPNAATYNTLLVEICRRDNILEAQEIFDEM-SRRGVLPDLVSFSSLIGVLARNGHL 413
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
+AL R+ E + + N Y +
Sbjct: 414 YQALMHFREME-----------------------------------RSGIVPDNVIYTIL 438
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I + + A K+ +E +R D+ N ++ C++ + A+ L + RG
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTR--WKPSK 438
P+ T+ + GY ++ M KAL L EA R KP K
Sbjct: 499 VPDFYTFTTLIRGYCKDGN-------MDKALNLFEAMVRTNLKPDK 537
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
L+ Y + KA + +M G++ + YN++++ Y + N +K L++EME++
Sbjct: 612 TLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR 671
Query: 217 GIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
G+ + T++++L+ CA E + M+E G+ D Y++ +G+V
Sbjct: 672 GLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEI--GINPDGATYSSLINGHV 723
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ Y + EKA I++ +M RGL I YN ++N + G ++ + ++ +M
Sbjct: 645 YNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMI 704
Query: 215 EKGIDCDKYTFSILLSA 231
E GI+ D T+S L++
Sbjct: 705 EIGINPDGATYSSLING 721
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%)
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
++++L K E+ + E + + DI N LI+AYCR GL+ +A L+ RG
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVL 427
EP + T+ + G + + ++ + + + L L
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL 356
>gi|225454795|ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27270-like
[Vitis vinifera]
Length = 1071
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 149/343 (43%), Gaps = 24/343 (6%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEK-LKLPSVYIA-LLNAYACAKSAEKAEIIMQQMRDRGL 183
+D AK E+A + V K ++L V I+ +++A A ++AE ++++ + GL
Sbjct: 716 IDAYAKCGKAEEAYHLYEEVTGKGIELGVVSISKVVHALANYGKHQEAENVIRRSFEDGL 775
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
T+ YN+ +N G +S+ M G+ T++ ++S G +DK
Sbjct: 776 ELDTVAYNTFINAMLGAGRLHFANSIYDRMVSLGVAPSIQTYNTMISVYG---RGRKLDK 832
Query: 244 IVAMMEADR----GVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYD 298
V M R GV LD Y S Y KAG S +A + R+ E + K S Y+
Sbjct: 833 AVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVS--YN 890
Query: 299 FVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLK-FDGMESAEKIFEEWES 356
+I YA G + +++ + + Y+ +I + + F +E+ E I
Sbjct: 891 IMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAYTQSFKFLEAEETIMSMQNE 950
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
L + N L+ A+ + G +AE + + G P+V + M GYL EK
Sbjct: 951 GVLPSCVHF-NQLLSAFAKAGFTEEAERVYHTLLSAGLSPDVACYRTMLRGYLDYGCVEK 1009
Query: 417 GVEAMKKALVLLEAGTRWKPSKECLAACLGYYK---KERDIEG 456
G+ ++ +E P + +++ + +YK KE + EG
Sbjct: 1010 GITFFEQIRESVE------PDRFIMSSAVHFYKLAGKELEAEG 1046
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%), Gaps = 14/253 (5%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VPE++ Y L++ + + ++A + + MR R +V S++ +YY+ G+Y
Sbjct: 329 VPEEV----TYSLLISLSSKTGNRDEAIKLYEDMRYRRIVPSNYTCASLLTLYYKNGDYS 384
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
+ SL EME+ I D+ + +L+ E +K E G++ + Y
Sbjct: 385 RAVSLFSEMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKETE-QLGLLTNEKTYIAM 443
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNK-FSRAYDFVITQYAACGNKDDVLRVWKRYKQN 323
A ++ +G +KAL ++ E++ N FSR V+ Q K+D+ ++
Sbjct: 444 AQVHLNSGNFEKALTIM---ELMRSRNIWFSRFSYIVLLQCYVM--KEDLASAEATFQAL 498
Query: 324 LKV-YNRGYIC--VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
K C +++ +K D +E A+ + + D+ + ++ YC++G+L
Sbjct: 499 SKTGLPDAGSCNDMLNLYIKLDLLEKAKDFIFQIRKDPVEFDMELCKTVMKVYCKKGMLR 558
Query: 381 KAETLIYKAQLRG 393
A+ LI + G
Sbjct: 559 DAKQLIQEMGTNG 571
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 76/383 (19%), Positives = 158/383 (41%), Gaps = 64/383 (16%)
Query: 52 KLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTK 111
++ R L+ D + +M ++ +V + L ++ +++K+ R +++ A WM
Sbjct: 131 RIVRSLAARPDGSYNMREVMGSFVAK---LSFREMCVVLKEQRGWRQ---ARDFFGWMKL 184
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYF------NCVPEKLKLPSVYIALLNAYACA 165
+ ++ + I L + +V I+ A F C P+++ + +L YA
Sbjct: 185 QLSYQPSVIVYTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGT----MLCTYARW 240
Query: 166 KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF 225
+ +++RG++ +N M++ + + K+ L EM +KG+ + +T+
Sbjct: 241 GRHKAMLSFYSAVQERGIIPSIAVFNFMLSSLQKKSLHGKVIDLWREMVDKGVVPNSFTY 300
Query: 226 SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
++++S+ DG ++E T Y G+V ++
Sbjct: 301 TVVISSL--VKDG--------LVEESFK-----TFYEMKNLGFVPEEVT----------- 334
Query: 286 VLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK--RYKQNLKVYNRGYICVISSLL---- 339
Y +I+ + GN+D+ +++++ RY+ ++ Y C +SLL
Sbjct: 335 -----------YSLLISLSSKTGNRDEAIKLYEDMRYR---RIVPSNYTC--ASLLTLYY 378
Query: 340 KFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVR 399
K A +F E E + D I LI Y + GL AE + + G N +
Sbjct: 379 KNGDYSRAVSLFSEMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKETEQLGLLTNEK 438
Query: 400 TWYLMATGYLQNNQSEKGVEAMK 422
T+ MA +L + EK + M+
Sbjct: 439 TYIAMAQVHLNSGNFEKALTIME 461
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 136/300 (45%), Gaps = 27/300 (9%)
Query: 135 IEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
+ A F+ +PEK + + A+++ Y +AE AE + QM R + I + +MM
Sbjct: 158 MASAGRLFDEMPEKNV--ATWNAMIDGYGKLGNAESAEFLFNQMPARDI----ISWTTMM 211
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGV 254
N Y + YK++ +L H++ +KG+ D+ T + ++SACA + K V + +G
Sbjct: 212 NCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHLG-ALALGKEVHLYLVLQGF 270
Query: 255 VLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVL 314
LD + ++ Y K G D AL V K L N F ++ +I A G ++ L
Sbjct: 271 DLDVYIGSSLIDMYAKCGSIDMALLVFYK---LQTKNLF--CWNCIIDGLATHGYVEEAL 325
Query: 315 RVW-----KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH- 368
R++ KR + N +I ++++ +E + F ++ C ++ ++
Sbjct: 326 RMFGEMERKRIRPNAVT----FISILTACTHAGFIEEGRRWFMS-MVQDYCIAPQVEHYG 380
Query: 369 -LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVL 427
++D + GLL A +I + EPN W + G + E A++ +VL
Sbjct: 381 CMVDLLSKAGLLEDALEMIRNMTV---EPNSFIWGALLNGCKLHKNLEIAHIAVQNLMVL 437
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 183/460 (39%), Gaps = 66/460 (14%)
Query: 18 GLGNVLDSSSSYSTATGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEE 77
GL N D S S T T+ V L K +ML P+ V +Q V++
Sbjct: 417 GLKNFEDMSGSSCVPTRTTYTVVIDGLCKA-------QML-----PDACKV--FEQMVQK 462
Query: 78 GRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI----AKVQ 133
G D +I F + A ++ M K P A+ I K+
Sbjct: 463 GCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKG-----PEPTAVTYGSIVHGFCKLD 517
Query: 134 GIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYN 191
I +A + E+ P ++I +LL+ Y AE+A ++ +M RG I Y
Sbjct: 518 MINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYT 577
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
S++++ + TG + + M EKG D T+ ++ + + E +I+ +M A
Sbjct: 578 SLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELM-AK 636
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKALAV--------LRKSEV---LMMHNKFSRA-YDF 299
GV D Y + GYVK D+A V ++ + V ++MH F D
Sbjct: 637 SGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDR 696
Query: 300 VITQYAACGNKDDVL-----------------RVWKRYKQNLKVYNRG-------YICVI 335
+ + KD+V RV + + Q ++ +RG Y +I
Sbjct: 697 AFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLI 756
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
SL K + A+K+ E+ + D++ + LI ++ A + + RG
Sbjct: 757 YSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCA 816
Query: 396 PNVRTWYLMATGYLQNNQSEKGVEAMKKAL---VLLEAGT 432
PN T+ ++ G+ ++ +EA+K+ V +EAG+
Sbjct: 817 PNEVTYKVLRRGFRAAGRALD-LEAVKQHFSQGVAMEAGS 855
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 132/310 (42%), Gaps = 22/310 (7%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I L+ + K + I++A F +P P++ Y +++ A ++A M D
Sbjct: 25 IVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDN 84
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE-MEEKGIDCDKYTFSILLSACAAASDGEG 240
G I + ++++ + + G + L+++ ++ D YT S++ C A G
Sbjct: 85 GCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYT-SVIHGYCKAGDLDTG 143
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV---LRKSEVLMMHNKFSRAY 297
+ M+ A G + D Y K G D+A + +RKS L + F
Sbjct: 144 FKILEEMLAA--GCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMT-- 199
Query: 298 DFVITQYAACGNKDDVLRVWKR-----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
+I + G D+ +++ Y+ L+V + +I +L K ++ A +I++
Sbjct: 200 --LIEALSNHGKLDEACELYREMIERGYEPYLEVQDS----LIFALCKAGKVDEANEIYQ 253
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
++ + N L+D YC+ G + L+ + P+++T+ ++ G+ + N
Sbjct: 254 TVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRAN 313
Query: 413 QSEKGVEAMK 422
+ + +E K
Sbjct: 314 RLDDALELFK 323
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 112/287 (39%), Gaps = 38/287 (13%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
+L+ A A ++A I Q + + + + YNS+M+ Y + G L+ +M
Sbjct: 234 SLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQM--- 290
Query: 217 GIDCDKY----TFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA- 271
++CD + T++IL++ + A+ + ++ ++ + G + Y T G A
Sbjct: 291 -VECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSS-YGCKPNAATYTTIIQGLYDAQ 348
Query: 272 ------GLSDKALAVL-------------RKSEVLMMHNKFSRA--------YDFVITQY 304
D+AL V+ R E + K A Y VI
Sbjct: 349 RMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGL 408
Query: 305 AACGNKDDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
G +D L+ ++ + V R Y VI L K + A K+FE+ + D
Sbjct: 409 LKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDT 468
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
LID + + + +A L+ +G EP T+ + G+ +
Sbjct: 469 ITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCK 515
>gi|296090624|emb|CBI41008.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 112/266 (42%), Gaps = 7/266 (2%)
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
++++Y ++G + + EM ++ + +F+ LL AC + + ID + +
Sbjct: 108 LISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKIDGFFQELPGNL 167
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD 312
GVV D Y + + + G D AL+VL + E + + ++ ++ + G+ D
Sbjct: 168 GVVPDVVSYNIIVNAFCEMGSLDSALSVLDEMEKVGLEPDLI-TFNTLLNAFYQNGSYAD 226
Query: 313 VLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
++W K+N N R Y + ++ + M A ++ +E ++ + D+ N L+
Sbjct: 227 GEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMK 286
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAG 431
+C G L +A+ Y R P VR Y+ +L EKG M L
Sbjct: 287 GFCNAGNLEEAKRW-YSEIARNELPPVRATYMTLIPFL----VEKGDFDMATELCKEVCS 341
Query: 432 TRWKPSKECLAACLGYYKKERDIEGA 457
RW L L KE IE A
Sbjct: 342 RRWLIEPALLQQVLEGLVKESKIEEA 367
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 107/272 (39%), Gaps = 30/272 (11%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
LLN + A ++ QMR G++ M Y + G + + EME G
Sbjct: 189 LLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMG 248
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
++ + + ++ E +I+ ++ +G+ + Y GY K G ++A
Sbjct: 249 LEVNLVAYHAVMDCYCGMGWTEDARRILESLQR-KGLSPNVVTYTLLVKGYCKDGRMEEA 307
Query: 278 LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNRGYI 332
V+++ + AY +I Y G DD RV + NL VYN
Sbjct: 308 ERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNT--- 364
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK----------- 381
+I+ L K ME +K+ +E E + D N LID YCR G + K
Sbjct: 365 -MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRN 423
Query: 382 ---AETLIYKAQLRG------TEPNVRTWYLM 404
A TL Y L+G + +R W+LM
Sbjct: 424 GLAATTLTYNTLLKGFCSLHAIDDALRLWFLM 455
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 109/271 (40%), Gaps = 19/271 (7%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ++N Y + A + +MRD G+ YN+M+N + G +++ ++ EME
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386
Query: 215 EKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ G+ DKY+++ L+ C S + + + M G+ Y T G+
Sbjct: 387 DVGMRPDKYSYNTLIDGYCREGSMRKAFE--MCRMMVRNGLAATTLTYNTLLKGFCSLHA 444
Query: 274 SDKALA---VLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-----YKQNLK 325
D AL ++ K V S D + G + L +WK +N+
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKA----GKTEQALNLWKETLARGLAKNVI 500
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+N VI+ L K M AE++ + + D L D YC+ G L A L
Sbjct: 501 TFNT----VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHL 556
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ K + G P+V + TG+ Q K
Sbjct: 557 MNKMEHLGFAPSVEMFNSFITGHFIAKQWHK 587
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 80/398 (20%), Positives = 148/398 (37%), Gaps = 87/398 (21%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRG-LVKKTIDYNSMMNVYYQTGNYKKLDS 208
P+V Y L+ Y E+AE ++++M++ G +V + Y M+N Y Q G
Sbjct: 286 PNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATR 345
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ +EM + GI + + ++ +++ E + K++ ME D G+ D Y T GY
Sbjct: 346 VRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME-DVGMRPDKYSYNTLIDGY 404
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRA---YDFVITQYAACGNKDDVLRVW-------- 317
+ G KA + R +M+ N + Y+ ++ + + DD LR+W
Sbjct: 405 CREGSMRKAFEMCR----MMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGV 460
Query: 318 -----------------KRYKQNLKVYN----RG-------YICVISSLLKFDGMESAEK 349
+ +Q L ++ RG + VI+ L K M AE+
Sbjct: 461 APNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEE 520
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLL------------------------------ 379
+ + + D L D YC+ G L
Sbjct: 521 LLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHF 580
Query: 380 -----HKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRW 434
HK + + RG PN+ T+ + G+ + EA ++ G
Sbjct: 581 IAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLH---EACNLYFEMVNNGM-- 635
Query: 435 KPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISA 472
P+ +A + + KE ++ A+ ++ L ++I
Sbjct: 636 NPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPG 673
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 17/161 (10%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K I A S F + K LP Y +L++ A + S ++A + M GL
Sbjct: 710 LCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPN 769
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIV 245
I YNS++ ++G + +L ++++ KGI + T++ L+ C E
Sbjct: 770 IITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQ 829
Query: 246 AMMEA--------------DRGVVLDWTVYATAASGYVKAG 272
M+E + V ++ Y T GY+K+G
Sbjct: 830 KMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSG 870
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 120/281 (42%), Gaps = 22/281 (7%)
Query: 147 EKLKLPSV-YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
EK+ + V Y AL+N Y E A + +M D G+ YN+M+N Y + G +
Sbjct: 264 EKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGE 323
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
++ L+ E +G++ D+Y+++ L+ C + + M+ G Y T
Sbjct: 324 VEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVR--NGFTGTTLTYNTL 381
Query: 265 ASGYVKAGLSDKALAV----LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR- 319
+G+ G D AL + L++ V N+ S + ++ + G + L +WK
Sbjct: 382 LNGFCSRGAIDDALKLWFLMLKRGVV---PNEISCST--LLDGFFKAGKTEQALNLWKET 436
Query: 320 ----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
+N+ N VI+ L K M AE++F + + D LID YC+
Sbjct: 437 LARGLARNVVTINT----VINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCK 492
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
G L +A + + + G P+V + TG QS K
Sbjct: 493 LGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGK 533
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 108/275 (39%), Gaps = 36/275 (13%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
LLN A A + QQMR G + M Y + G + EMEE G
Sbjct: 135 LLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMG 194
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
+D + + ++ E K++ ++ +G+ + Y GY K G ++A
Sbjct: 195 LDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQV-KGLSPNVVTYTLLVKGYCKEGRMEEA 253
Query: 278 LAV---LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-----YKQNLKVYNR 329
V ++++E +++ AY +I Y G +D RV + N+ VYN
Sbjct: 254 EKVVKEIKENEKIVID---EVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNT 310
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA------- 382
+I+ K M EK+ + E R + D N L+D YCR+G + KA
Sbjct: 311 ----MINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMM 366
Query: 383 -------ETLIYKAQLRG------TEPNVRTWYLM 404
TL Y L G + ++ W+LM
Sbjct: 367 VRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLM 401
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 127/315 (40%), Gaps = 53/315 (16%)
Query: 151 LPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
+PSV + + + AK + K I +M +GL T+ Y +++ + + GN
Sbjct: 512 VPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACI 571
Query: 209 LMHEMEEKGIDCDKYTFSILLSA-------------------------CAAASDGEGIDK 243
L EM EKG+ + + S+L+S C+A++ I K
Sbjct: 572 LYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSAST--LNIGK 629
Query: 244 IVAMMEADRG-----VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL-MMHNKFSRAY 297
+ ++E+ G + W + G K G A + +V + + F+ Y
Sbjct: 630 VAHIIESLAGGNHQSAKIMWNIVIL---GLCKLGRVADARNLFEDLKVKGFIPDNFT--Y 684
Query: 298 DFVITQYAACGN-------KDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKI 350
+I +A G+ +D++L R N+ YN +I L K + A +
Sbjct: 685 SSLIHGCSASGSIDLAFGLRDEMLSA--RLTPNIVTYNS----LIYGLCKSCNVSRAVSL 738
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
F + +S+ + + N LID +C+ G +A L K G +P V T+ ++ G
Sbjct: 739 FNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCT 798
Query: 411 NNQSEKGVEAMKKAL 425
E+ ++ + + +
Sbjct: 799 QGYMEEAIKLLDQMI 813
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +L+ + + +A + +++ +G+ I YN++++ + + GN + L +M
Sbjct: 719 YNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMI 778
Query: 215 EKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
++GI +T++IL+ C E I + M+E + V ++ Y T GY + G
Sbjct: 779 KEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENN--VDPNFITYWTLIQGYARCG 835
>gi|297737325|emb|CBI26526.3| unnamed protein product [Vitis vinifera]
Length = 1005
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 149/343 (43%), Gaps = 24/343 (6%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEK-LKLPSVYIA-LLNAYACAKSAEKAEIIMQQMRDRGL 183
+D AK E+A + V K ++L V I+ +++A A ++AE ++++ + GL
Sbjct: 650 IDAYAKCGKAEEAYHLYEEVTGKGIELGVVSISKVVHALANYGKHQEAENVIRRSFEDGL 709
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
T+ YN+ +N G +S+ M G+ T++ ++S G +DK
Sbjct: 710 ELDTVAYNTFINAMLGAGRLHFANSIYDRMVSLGVAPSIQTYNTMISVYG---RGRKLDK 766
Query: 244 IVAMMEADR----GVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYD 298
V M R GV LD Y S Y KAG S +A + R+ E + K S Y+
Sbjct: 767 AVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVS--YN 824
Query: 299 FVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLK-FDGMESAEKIFEEWES 356
+I YA G + +++ + + Y+ +I + + F +E+ E I
Sbjct: 825 IMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAYTQSFKFLEAEETIMSMQNE 884
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
L + N L+ A+ + G +AE + + G P+V + M GYL EK
Sbjct: 885 GVLPSCVHF-NQLLSAFAKAGFTEEAERVYHTLLSAGLSPDVACYRTMLRGYLDYGCVEK 943
Query: 417 GVEAMKKALVLLEAGTRWKPSKECLAACLGYYK---KERDIEG 456
G+ ++ +E P + +++ + +YK KE + EG
Sbjct: 944 GITFFEQIRESVE------PDRFIMSSAVHFYKLAGKELEAEG 980
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%), Gaps = 14/253 (5%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
VPE++ Y L++ + + ++A + + MR R +V S++ +YY+ G+Y
Sbjct: 308 VPEEV----TYSLLISLSSKTGNRDEAIKLYEDMRYRRIVPSNYTCASLLTLYYKNGDYS 363
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
+ SL EME+ I D+ + +L+ E +K E G++ + Y
Sbjct: 364 RAVSLFSEMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKETE-QLGLLTNEKTYIAM 422
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNK-FSRAYDFVITQYAACGNKDDVLRVWKRYKQN 323
A ++ +G +KAL ++ E++ N FSR V+ Q K+D+ ++
Sbjct: 423 AQVHLNSGNFEKALTIM---ELMRSRNIWFSRFSYIVLLQCYVM--KEDLASAEATFQAL 477
Query: 324 LKV-YNRGYIC--VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
K C +++ +K D +E A+ + + D+ + ++ YC++G+L
Sbjct: 478 SKTGLPDAGSCNDMLNLYIKLDLLEKAKDFIFQIRKDPVEFDMELCKTVMKVYCKKGMLR 537
Query: 381 KAETLIYKAQLRG 393
A+ LI + G
Sbjct: 538 DAKQLIQEMGTNG 550
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 121/260 (46%), Gaps = 9/260 (3%)
Query: 133 QGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSA--EKAEIIMQQMRDRGLVKKTIDY 190
+GI + + FN + L+ S++ +++ ++ K E++ +M++ G V + + Y
Sbjct: 256 RGIIPSIAVFNFMLSSLQKKSLHGKVID-FSLVKDGLVEESFKTFYEMKNLGFVPEEVTY 314
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA 250
+ ++++ +TGN + L +M + I YT + LL+ D + + ME
Sbjct: 315 SLLISLSSKTGNRDEAIKLYEDMRYRRIVPSNYTCASLLTLYYKNGDYSRAVSLFSEMEK 374
Query: 251 DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL-MMHNKFSRAYDFVITQYAACGN 309
++ +V D +Y Y K GL + A +++E L ++ N+ + Y + + GN
Sbjct: 375 NK-IVADEVIYGLLIRIYGKLGLYEDAEKTFKETEQLGLLTNE--KTYIAMAQVHLNSGN 431
Query: 310 KDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
+ L + + + +N+ YI ++ + + + SAE F+ L D N
Sbjct: 432 FEKALTIMELMRSRNIWFSRFSYIVLLQCYVMKEDLASAEATFQALSKTGL-PDAGSCND 490
Query: 369 LIDAYCRRGLLHKAETLIYK 388
+++ Y + LL KA+ I++
Sbjct: 491 MLNLYIKLDLLEKAKDFIFQ 510
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 25/255 (9%)
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
I Y ++ VY Q G K + EM E G + D+ +L A + + +
Sbjct: 192 VIVYTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGTMLCTYARWGRHKAMLSFYS 251
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKAL--AVLRKSEVLMMHNKFSR--------- 295
++ +RG++ V+ S K L K + ++++ V F
Sbjct: 252 AVQ-ERGIIPSIAVFNFMLSSLQKKSLHGKVIDFSLVKDGLVEESFKTFYEMKNLGFVPE 310
Query: 296 --AYDFVITQYAACGNKDDVLRVWK--RYKQNLKVYNRGYICVISSLL----KFDGMESA 347
Y +I+ + GN+D+ +++++ RY+ ++ Y C +SLL K A
Sbjct: 311 EVTYSLLISLSSKTGNRDEAIKLYEDMRYR---RIVPSNYTC--ASLLTLYYKNGDYSRA 365
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+F E E + D I LI Y + GL AE + + G N +T+ MA
Sbjct: 366 VSLFSEMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKETEQLGLLTNEKTYIAMAQV 425
Query: 408 YLQNNQSEKGVEAMK 422
+L + EK + M+
Sbjct: 426 HLNSGNFEKALTIME 440
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 116/257 (45%), Gaps = 7/257 (2%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+ + K+ +A ++ +M + L + YNS+++ + G L++ M
Sbjct: 182 YNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMN 241
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
E G+ D++T+S+ + E + + ++ ++G+ + +Y GY KAG
Sbjct: 242 ENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLK-EKGIKANEVIYTALIDGYCKAGKM 300
Query: 275 DKALAVLRK---SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
D A ++L + + L + ++ D + + ++ +L + ++ LK Y
Sbjct: 301 DDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKV---QEALLLMESMIQKGLKCTVPTY 357
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I ++LK + A +I ++ S D+ I I A+C RG + +AE ++
Sbjct: 358 TILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFE 417
Query: 392 RGTEPNVRTWYLMATGY 408
RG P+ T+ L+ Y
Sbjct: 418 RGVMPDALTYTLVIDAY 434
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 123/298 (41%), Gaps = 31/298 (10%)
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEK-LKLPSV-YIALLNAYACAKSAEKAEIIMQQMRD 180
++ +D + K IE+A FN + EK +K V Y AL++ Y A + A ++ +M
Sbjct: 253 SVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLT 312
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
+ + YN++++ + ++ LM M +KG+ C T++IL+ A D +
Sbjct: 313 EDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDY 372
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA---- 296
+I+ M G D +Y + G ++++E MM F R
Sbjct: 373 AHRILDQM-VSSGYQPDVYIYTAFIHAFCTRG-------NIKEAED-MMSMMFERGVMPD 423
Query: 297 ---YDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
Y VI Y G + V KR + + Y C+I LLK E++ +
Sbjct: 424 ALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLK-------EELTK 476
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAET---LIYKAQLRGTEPNVRTWYLMATG 407
++++ LC IPN + K ET L K G PN+ T+ + G
Sbjct: 477 KYKNVALCDS--IPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIG 532
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 138/333 (41%), Gaps = 45/333 (13%)
Query: 135 IEQAASYFNCVPEK--LKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+ A S FN +P+K + Y L++ ++ I ++MR+ Y
Sbjct: 20 VNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTV 79
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+++ +++G + +L EM E+G + + +T++++++A + E +I+ M ++
Sbjct: 80 IVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEM-VEK 138
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVL-----------------------RKSEVL-- 287
G+V Y GY K G+ + A +L RK V
Sbjct: 139 GLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRA 198
Query: 288 ------MMHNKFSRA---YDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISS 337
M+ ++ + + Y+ +I G D R+ +N V ++ Y I +
Sbjct: 199 MALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDT 258
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
L K +E A +F + + + + I LID YC+ G + A +L+ + PN
Sbjct: 259 LCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPN 318
Query: 398 VRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA 430
T+ + G + + +++AL+L+E+
Sbjct: 319 SSTYNALIDGLCKERK-------VQEALLLMES 344
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 113/281 (40%), Gaps = 13/281 (4%)
Query: 137 QAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
+A + F+ + E+ P++ Y ++NA E+ I+ +M ++GLV YN+++
Sbjct: 92 EAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALI 151
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRG 253
+ Y + G + ++ M + ++ T++ L+ C + + + M+E+
Sbjct: 152 DGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESR-- 209
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNK 310
+ Y + G K G D A +L LM N Y I G
Sbjct: 210 LTPSVVTYNSLIHGQCKIGYLDSAYRLLN----LMNENGVVPDQWTYSVFIDTLCKKGRI 265
Query: 311 DDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
++ ++ K+ +K Y +I K M+ A + + + + + N L
Sbjct: 266 EEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNAL 325
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
ID C+ + +A L+ +G + V T+ ++ L+
Sbjct: 326 IDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLK 366
>gi|326504234|dbj|BAJ90949.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 200
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 7/128 (5%)
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
D E+ + EE + + +DIR+ N L+ AY G+L KA L +A++RG N +T
Sbjct: 22 LDVKETEDTGTEELDLKRPKYDIRVANALMKAYVTEGMLDKAIALKKRAKMRGGRLNAKT 81
Query: 401 WYLMATGYLQ----NNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEG 456
W + YL+ N A+KK +G W P + +GY++K++D++G
Sbjct: 82 WEIFMEHYLKVGDLKNAHWCADRAIKKG---HSSGRIWVPPHDVTETLMGYFEKKKDVDG 138
Query: 457 ADYFIKLL 464
A+ F+++L
Sbjct: 139 AESFVEVL 146
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 40/256 (15%)
Query: 155 YIALLNAYACAKSAEKAEI-IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+ L+N Y C S A + + ++M+ +G+ + YNS+++ G ++ LM EM
Sbjct: 267 FGVLINGY-CKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM 325
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
E+ G+ ++ TF +L C + D I M E R V D +Y GY + G
Sbjct: 326 EDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE--RNVEPDVVIYTILIDGYRRLG 383
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYI 332
+ A+AV K+ + + K N+ YN
Sbjct: 384 KMEDAMAV-----------------------------KEAMAK--KGISPNVTTYN---- 408
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
C+I+ + SA + +E + + + D+ N LI A C +G + KA L+ +
Sbjct: 409 CLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEV 468
Query: 393 GTEPNVRTWYLMATGY 408
G EPN T+ + G+
Sbjct: 469 GLEPNHLTYNTIIQGF 484
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y L++ Y E A + + M +G+ YN ++ + ++G+++ L+ EM
Sbjct: 371 IYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM 430
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKA 271
+EKGI+ D T+++L+ A + + K V +++ ++ G+ + Y T G+
Sbjct: 431 KEKGIEADVVTYNVLIGALCCKGE---VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDK 487
Query: 272 G 272
G
Sbjct: 488 G 488
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 145/351 (41%), Gaps = 39/351 (11%)
Query: 100 SHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--A 157
S A+Q +TKK N + L+ + K+ A ++ + + P+VY
Sbjct: 179 SDAIQ-CFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNV 237
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
L+N + A++I ++R GL + +N+++N Y ++GN ++ L MEE
Sbjct: 238 LMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFR 297
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
+ D +T+S L+ E + + M DRG+V + + T +G K G D A
Sbjct: 298 VFPDVFTYSALIDGLCKECQLEDANHLFKEM-CDRGLVPNDVTFTTLINGQCKNGRVDLA 356
Query: 278 LAVLRKSEV------LMMHNK----------FSRAYDFV--ITQY--------------A 305
L + ++ L+++N F A FV +T+
Sbjct: 357 LEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDG 416
Query: 306 ACGNKDDVLRVWKR---YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
+C D L + R K+ +++ N + +IS L + + AE+ E L D
Sbjct: 417 SCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPD 476
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
++D +C++G + L+ + Q G P V T+ ++ G + Q
Sbjct: 477 DGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQ 527
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y AL++ + ++A + M +G + Y++++N Y + +K L
Sbjct: 311 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 370
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME-ADRGVVLDWTVYATAASGY 268
EM K + + T+S L+ G D I E RG + D+ Y
Sbjct: 371 FEEMCRKELIPNTVTYSTLMHGLCHV--GRLQDAIALFHEMVTRGQIPDFVSYCILLDYL 428
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
K D+A+A+L+ E N D +++
Sbjct: 429 CKNRRLDEAIALLKAIE---------------------GSNMDPDIQI------------ 455
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y VI + + +E+A +F S+ L ++ +I+ C++GLL +A L +
Sbjct: 456 --YTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGE 513
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
+ +G PN T+ L+ G+L+NN++ +G++ +++ L
Sbjct: 514 MKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEML 550
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 122/322 (37%), Gaps = 51/322 (15%)
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL-SACAAASDGEGIDKIVAM 247
D+ ++ + +Y + SL H+M+ GI + YT +IL+ S C G + +
Sbjct: 70 DFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKI 129
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQY 304
++ G + + T G G + L + K M+ F Y +I
Sbjct: 130 LKL--GHQPNIATFNTLIRGLCVEGKIGEVLHLFDK----MIGEGFQPNVVTYGTLINGL 183
Query: 305 AACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR------ 357
G+ +R+ + +Q N + Y +I SL K + A +F E +
Sbjct: 184 CKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSI 243
Query: 358 -----------NLCH------------------DIRIPNHLIDAYCRRGLLHKAETLIYK 388
NLC ++ I + ++DA C+ G + +A ++
Sbjct: 244 FTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDM 303
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYY 448
RG EPNV T+ + G+ ++ ++ V+ + + P + + Y
Sbjct: 304 MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVC-----KGFAPDVVSYSTLINGY 358
Query: 449 KKERDIEGADYFIKLLTGKEII 470
K + IE A Y + + KE+I
Sbjct: 359 CKIQRIEKAMYLFEEMCRKELI 380
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 119/272 (43%), Gaps = 13/272 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY +L++AYA + E+A +++M++ G+ + Y+ ++ + + + + D E
Sbjct: 326 VYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEA 385
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+E+ + + ++ A A + + +V ME + G+ +Y T GY G
Sbjct: 386 KERHTTLNAIIYGNIIYAHCQACNMTQAEALVREME-EEGIDAPIDIYHTMMDGYTIIGN 444
Query: 274 SDKALAVL-RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-----KQNLKVY 327
+K L V R E + S Y +I Y G L V K K N+K Y
Sbjct: 445 EEKCLIVFDRLKECGFTPSVIS--YGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTY 502
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
+ +I+ ++ +A +FE+ L D+ + N++I A+C G + +A +
Sbjct: 503 S----MLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVK 558
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+ Q P RT+ + G+ ++ + +E
Sbjct: 559 EMQKERHRPTTRTFMPIIHGFARSGDMRRALE 590
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 5/132 (3%)
Query: 154 VYIALLNAYACAKSA--EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
Y ALL A C KS + A + ++M + + + T YN +++ + + G+ + LM
Sbjct: 676 TYEALLKA--CCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQ 733
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
+M+++G+ D +T++ ++AC A D + K + ME GV + Y T G+ +A
Sbjct: 734 QMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEV-VGVKPNIKTYTTLIHGWARA 792
Query: 272 GLSDKALAVLRK 283
L +KAL ++
Sbjct: 793 SLPEKALKCFQE 804
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 101/271 (37%), Gaps = 38/271 (14%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y +++ Y + EK I+ ++++ G I Y ++N+Y + G K + M
Sbjct: 431 IYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMM 490
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E GI + T+S+L++ + DW VK GL
Sbjct: 491 EVAGIKHNMKTYSMLINGFVR--------------------LKDWANAFAVFEDVVKDGL 530
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYI 332
K +V++ Y+ +I + GN D +R K K+ + R ++
Sbjct: 531 ---------KPDVVL--------YNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFM 573
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I + M A +IF+ + N LI + + KA ++ + L
Sbjct: 574 PIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLA 633
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G PN T+ + GY + K E K
Sbjct: 634 GISPNEHTYTTIMHGYASLGDTGKAFEYFTK 664
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 107/251 (42%), Gaps = 7/251 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+N + K A + + + GL + YN+++ + GN + + EM
Sbjct: 501 TYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEM 560
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+++ TF ++ A + D +I MM G + + G V+
Sbjct: 561 QKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWS-GCIPTVHTFNALILGLVEKCQ 619
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN---LKVYNRG 330
+KA+ +L + + + + Y ++ YA+ G+ + + K L VY
Sbjct: 620 MEKAVEILDEMSLAGI-SPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYT-- 676
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y ++ + K M+SA + E S+ + + + N LID + RRG + +A L+ + +
Sbjct: 677 YEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMK 736
Query: 391 LRGTEPNVRTW 401
G +P++ T+
Sbjct: 737 QEGVQPDIHTY 747
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 114/272 (41%), Gaps = 40/272 (14%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++ +++ +A + +A I MR G + +N+++ + +K ++ EM
Sbjct: 571 TFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEM 630
Query: 214 EEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
GI +++T++ ++ A+ D G+ + + G+ LD Y K+G
Sbjct: 631 SLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKL--KTEGLELDVYTYEALLKACCKSG 688
Query: 273 LSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
ALAV R+ S + N F Y+ +I +A G+ VW+
Sbjct: 689 RMQSALAVTREMSSQKIPRNTF--VYNILIDGWARRGD------VWE------------- 727
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
A ++ ++ + + DI I+A C+ G + +A I + ++
Sbjct: 728 ---------------AAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEV 772
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G +PN++T+ + G+ + + EK ++ ++
Sbjct: 773 VGVKPNIKTYTTLIHGWARASLPEKALKCFQE 804
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 104/268 (38%), Gaps = 44/268 (16%)
Query: 144 CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
C+P ++ + L+ K+ E I+ +M G+ Y ++M+ Y G+
Sbjct: 600 CIPTVHTFNALILGLVEKCQMEKAVE----ILDEMSLAGISPNEHTYTTIMHGYASLGDT 655
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYAT 263
K +++ +G++ D YT+ LL AC
Sbjct: 656 GKAFEYFTKLKTEGLELDVYTYEALLKACC------------------------------ 685
Query: 264 AASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ 322
K+G ALAV R+ S + N F Y+ +I +A G+ + + ++ KQ
Sbjct: 686 ------KSGRMQSALAVTREMSSQKIPRNTF--VYNILIDGWARRGDVWEAAELMQQMKQ 737
Query: 323 -NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
++ Y I++ K M+ A K +E E + +I+ LI + R L K
Sbjct: 738 EGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEK 797
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYL 409
A + + G +P+ ++ + T L
Sbjct: 798 ALKCFQEMKSAGLKPDKAVYHCLMTSLL 825
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 11/130 (8%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY L++ +A +A +MQQM+ G+ Y S +N + G+ ++ + EM
Sbjct: 711 VYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEM 770
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVY----------AT 263
E G+ + T++ L+ A AS E K M++ G+ D VY A+
Sbjct: 771 EVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKS-AGLKPDKAVYHCLMTSLLSRAS 829
Query: 264 AASGYVKAGL 273
A Y+ +G+
Sbjct: 830 VAEEYIYSGV 839
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 155/349 (44%), Gaps = 22/349 (6%)
Query: 89 IIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA---IRLDLIAKVQGIEQAASYFNCV 145
+I F K+ A+++ M ++ P ++ + +D + K+ + A +
Sbjct: 185 LIAAFARAKKLEEAMKLLEEMRERG----CPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 240
Query: 146 PEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
E P+V + +L++ + + + A ++ M +G+ + Y+++++ ++ +
Sbjct: 241 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF 300
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYAT 263
+ ++ EM+ +G+ D +T+S L+ A E ++++ M A G D VY++
Sbjct: 301 LEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM-AGSGCTPDVVVYSS 359
Query: 264 AASGYVKAGL---SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
+ K+G + K L +RK + Y+ VI G + + ++
Sbjct: 360 IIHAFCKSGKLLEAQKTLQEMRKQR----KSPDVVTYNTVIDGLCKLGKIAEAQVILEQM 415
Query: 321 KQNLKVYNR--GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
+++ V Y VI+ L K D + A+K+ + D+ +ID C+ G
Sbjct: 416 QESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGR 475
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN---NQSEKGVEAMKKA 424
L +AE L+ + G PNV T+ + +G + +++E+ +E M+ A
Sbjct: 476 LEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNA 524
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 111/278 (39%), Gaps = 46/278 (16%)
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
YN +++ + G+ L+ EM+ G D +T + +++A A A D +G + M
Sbjct: 115 YNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMG 174
Query: 250 ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN 309
D VV Y + + +A ++A+ +L +
Sbjct: 175 CDPNVV----TYTALIAAFARAKKLEEAMKLLEEMR------------------------ 206
Query: 310 KDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
+ NL YN ++ +L K + +A+ + ++ ++ N L
Sbjct: 207 -------ERGCPPNLVTYN----VLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL 255
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE 429
+D +C+RG + A L+ +G PNV T+ + G +S+K +EA + VL E
Sbjct: 256 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLC---KSQKFLEAKE---VLEE 309
Query: 430 AGTRW-KPSKECLAACLGYYKKERDIEGADYFIKLLTG 466
TR P +A + K IE A+ ++ + G
Sbjct: 310 MKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAG 347
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 132 VQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYN 191
+QG+++A N V Y L++ A+ ++AE +M++MR+ G + YN
Sbjct: 483 LQGMKRAGCAPNVV--------TYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYN 534
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDC--DKYTFSILLSA 231
+M+N +G K+ L+ M++ +C D T+ +++A
Sbjct: 535 TMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNA 576
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 106/261 (40%), Gaps = 53/261 (20%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ +M G+V T+ YN++MNV LM ME ID F+++
Sbjct: 387 LFHRMSRDGVVPNTVTYNALMNV------------LMENME---IDSALIVFNMM----- 426
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL------RKSEVL 287
G + + + Y GY G ++KA+++L R + L
Sbjct: 427 ----------------GKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTL 470
Query: 288 MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMES 346
+ Y+ +I Y G+ D +RV + K N + Y +IS K ME
Sbjct: 471 V-------TYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMEL 523
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
A +F E R LC + LI YC+ L A ++ + + G PNV+T+ ++
Sbjct: 524 ASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIH 583
Query: 407 GYL-QNNQSEKGVEAMKKALV 426
G QNN S G E + K ++
Sbjct: 584 GLTKQNNFS--GAEELCKVML 602
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/282 (17%), Positives = 110/282 (39%), Gaps = 39/282 (13%)
Query: 176 QQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAA 235
Q+ GL + YNS++N + GN + +S+++++ + G+ D +T++ ++
Sbjct: 217 HQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRN 276
Query: 236 SDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR 295
D + +I M+ + G + Y+T +G +G ++AL + + + H
Sbjct: 277 RDLDSAFEIFNRMD-EEGCEPNAATYSTLINGLCNSGRVNEALDFISE---MTRHGVLPT 332
Query: 296 AYDFVITQYAAC--GNKDDVLRVW-----KRYKQNLKVYNR------------------- 329
+ F A C G +D +++ K K N+ Y
Sbjct: 333 VHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMS 392
Query: 330 ---------GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
Y +++ L++ ++SA +F + N LI YC G
Sbjct: 393 RDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTE 452
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
KA +++ P + T+ ++ GY + ++ + ++
Sbjct: 453 KAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLE 494
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 131/310 (42%), Gaps = 18/310 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y ++N Y A + + ++M+ G Y +++N + + G +K + + EM
Sbjct: 279 TYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEM 338
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
++ G + D Y ++ L+ A + A +G +I ++ME G D Y + +AGL
Sbjct: 339 QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLME-HMGCEPDRASYNILVDAFGRAGL 397
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYI 332
+A A ++ + M +++ +++ +A GN V + +K L+
Sbjct: 398 HQEAEAAFQELKQQGMRPTM-KSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALN 456
Query: 333 CVISSLLKFDGMESAEKIFEEWESRN----LCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
++++ + ++ E++F E + D N +++AY R G L + E
Sbjct: 457 AMLNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAGYLDRMEAAFRS 516
Query: 389 AQLRGTEPNVRTWYLMATGYLQN---NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACL 445
RG +V TW Y + Q + E M A +AGT +K LAAC
Sbjct: 517 LAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGT----AKVLLAAC- 571
Query: 446 GYYKKERDIE 455
ER +E
Sbjct: 572 ---SDERQVE 578
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/361 (18%), Positives = 148/361 (40%), Gaps = 43/361 (11%)
Query: 92 KFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKL 151
+ RL +++ + + W+ ++S+F + +D + + + +A + + + E +
Sbjct: 145 QLRLNRQWEPIITVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCV 204
Query: 152 PS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+ Y LL AY + +AE ++ +M+ G+ YN+ ++ + +K +
Sbjct: 205 PTEDTYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEV 264
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
M+++ + T++++++ A+ ++ M++ G + Y + +
Sbjct: 265 YQRMKKERCRTNTETYTLMINVYGKANQPMSSLRVFREMKS-VGCKPNICTYTALVNAFA 323
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
+ GL +KA + V + G++ DV Y ++ Y+R
Sbjct: 324 REGLCEKA--------------------EEVFEEMQQAGHEPDVY----AYNALMEAYSR 359
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
+ + A +IF E D N L+DA+ R GL +AE +
Sbjct: 360 AGL-----------PQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQEL 408
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYK 449
+ +G P +++ L+ + + ++ + E M + L ++G R P L A L Y
Sbjct: 409 KQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQ---LHKSGLR--PDTFALNAMLNAYG 463
Query: 450 K 450
+
Sbjct: 464 R 464
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y ++NAY A ++ E + + RGL + + S + Y + Y + + E
Sbjct: 492 STYNVMVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEE 551
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
M + G D T +LL+AC+ E + IV M D
Sbjct: 552 MVDAGCYPDAGTAKVLLAACSDERQVEQVKAIVRSMHKD 590
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 114/264 (43%), Gaps = 16/264 (6%)
Query: 166 KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF 225
K KA ++ +M++ G+ I Y +++ + + L ME+ G+ D+ +
Sbjct: 507 KKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAY 566
Query: 226 SILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS 284
++L A C + E +V +GVVL Y + G+ KAG +D A ++ K
Sbjct: 567 NVLTDALCKSGRAEEAYSFLV-----RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEK- 620
Query: 285 EVLMMHNKFSRA--YDFVITQYAACGNK--DDVLRVWKRYK-QNLKVYNRGYICVISSLL 339
M N+ +A Y + + A C K ++ L + + +K Y +IS ++
Sbjct: 621 ----MVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMI 676
Query: 340 KFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVR 399
K + A+ +F E S I +YC+ G + +AE LI + + G P+V
Sbjct: 677 KEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVV 736
Query: 400 TWYLMATGYLQNNQSEKGVEAMKK 423
T+++ G ++ +K+
Sbjct: 737 TYHIFINGCGHMGYMDRAFSTLKR 760
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 105/256 (41%), Gaps = 43/256 (16%)
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILL 229
A ++ +M RG+V YN+M++ Y ++G K + ME+ G + D +T+ S++
Sbjct: 303 ARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIY 362
Query: 230 SACAAASDG--EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
C D E ++ +A RG + +GY KA D AL V KS ++
Sbjct: 363 GLCGGKLDEAEELLNGAIA-----RGFTPTVITFTNLINGYCKAERIDDALRV--KSNMI 415
Query: 288 MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESA 347
N K+ + Y +I+ L+K ++ A
Sbjct: 416 ---------------------------------SSNCKLDLQAYGVLINVLIKKCRLKEA 442
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
++ E + L ++ I +ID YC+ G++ A + + G PN T+ + G
Sbjct: 443 KETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYG 502
Query: 408 YLQNNQSEKGVEAMKK 423
+Q+ + K + + K
Sbjct: 503 LIQDKKLHKAMALITK 518
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 99/257 (38%), Gaps = 41/257 (15%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L +A + AE+A + + +G+V + Y S+++ + + GN L+ +M
Sbjct: 566 YNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMV 622
Query: 215 EKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+G D YT+S+LL A C E + + M + GV + Y S +K G
Sbjct: 623 NEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVS--GVKCNIVAYTIIISEMIKEGK 680
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
D A ++ + + G+K Y
Sbjct: 681 HDHAKSLF--------------------NEMISSGHKPSATT---------------YTV 705
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
ISS K +E AE + E E + D+ + I+ G + +A + + +
Sbjct: 706 FISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDAS 765
Query: 394 TEPNVRTWYLMATGYLQ 410
EPN T++L+ +L+
Sbjct: 766 CEPNCWTYWLLLKHFLK 782
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 131/313 (41%), Gaps = 14/313 (4%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
L++ Y E+ + +M + G +NS++N + G+ K ++ M ++
Sbjct: 286 VLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQE 345
Query: 217 GIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
G D D +T+ S++ C E ++ + M+ D + Y T S K +
Sbjct: 346 GFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSP--NTVTYNTLISTLCKENQVE 403
Query: 276 KALAVLRKSEVLMMHNKFSRAYDF--VITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYI 332
+A + R VL F +I N + +++ K + Y
Sbjct: 404 EATELAR---VLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYN 460
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I SL +E A + +E ES ++ N LID +C+ + +AE + + +L+
Sbjct: 461 MLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQ 520
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKER 452
G NV T+ + G +N + E+ + M + +L+E KP K + L Y+ +
Sbjct: 521 GISRNVVTYNTLIDGLCKNRRVEEAAQLMDQ--MLMEG---LKPDKFTYNSLLTYFCRAG 575
Query: 453 DIEGADYFIKLLT 465
DI+ A ++ +T
Sbjct: 576 DIKKAADIVQTMT 588
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 121/274 (44%), Gaps = 17/274 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+ L+ + + A I +QM G + N +++ Y + G +++ S + EM
Sbjct: 248 TFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEM 307
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+G D++TF+ L++ C ++ + M++ G D Y + G K G
Sbjct: 308 SNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQ--EGFDPDIFTYNSLIFGLCKLG 365
Query: 273 LSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
++A+ +L + M+ FS Y+ +I+ ++ + + + +
Sbjct: 366 EVEEAVEILNQ----MILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD- 420
Query: 330 GYICVISSLLK----FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+C +SL++ + A ++FEE +++ D N LID+ C RG L +A +L
Sbjct: 421 --VCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSL 478
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+ + + G NV T+ + G+ +N + E+ E
Sbjct: 479 LKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEE 512
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++ + K E+AE I +M +G+ + + YN++++ + ++ LM +M
Sbjct: 493 TYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQM 552
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+G+ DK+T++ LL+ A D + IV M ++ G D Y T G KAG
Sbjct: 553 LMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSN-GCEPDSVTYGTLILGLSKAGR 611
Query: 274 SDKALAVLRKSEV 286
+ A +LR ++
Sbjct: 612 VELASRLLRTVQL 624
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 138/374 (36%), Gaps = 60/374 (16%)
Query: 108 WMTKKSNFVLTPADVAIRLDL--------IAKVQGIEQAASYFNCVPEKLKLPSVYIALL 159
W +K+ NFV P+ V L ++ + Q + C + ++ L+
Sbjct: 94 WASKQPNFV--PSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRR----GTFLILI 147
Query: 160 NAYACAKSAEKAEIIMQQMRDR-GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGI 218
+YA + ++A ++ M + GL YN ++NV K ++ + M +GI
Sbjct: 148 ESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGI 207
Query: 219 DCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDK 276
D TF+IL+ A A I + MME G+ D + T G+++ G +
Sbjct: 208 KPDVTTFNILIKALCRAHQ---IRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNG 264
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVIS 336
AL + Q A G + V V GY
Sbjct: 265 ALRIRE--------------------QMVAAGCPSSNVTV--------NVLVHGYC---- 292
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
K +E +E + D N L++ CR G + A ++ G +P
Sbjct: 293 ---KEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDP 349
Query: 397 NVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEG 456
++ T+ + G + + E+ VE + + ++ + P+ + KE +E
Sbjct: 350 DIFTYNSLIFGLCKLGEVEEAVEILNQMIL-----RDFSPNTVTYNTLISTLCKENQVEE 404
Query: 457 ADYFIKLLTGKEII 470
A ++LT K I+
Sbjct: 405 ATELARVLTSKGIL 418
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 111/281 (39%), Gaps = 38/281 (13%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K+ +E+A N + + P+ Y L++ E+A + + + +G++
Sbjct: 361 LCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 420
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+NS++ T N++ L EM+ KG D++T+++L+ + + E ++
Sbjct: 421 VCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLK 480
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
ME+ G + Y T G+ K ++A + + E+
Sbjct: 481 EMESS-GCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMEL-------------------- 519
Query: 307 CGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
+ +N+ YN +I L K +E A ++ ++ L D
Sbjct: 520 -----------QGISRNVVTYNT----LIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTY 564
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
N L+ +CR G + KA ++ G EP+ T+ + G
Sbjct: 565 NSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILG 605
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
I K I Q + C P+ + Y L+ + A E A +++ ++ +G+V
Sbjct: 577 IKKAADIVQTMTSNGCEPDSV----TYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQ 632
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASD-GEGIDKIVA 246
YN ++ ++ + L EM EKG D T+ ++ C+ GE +D +V
Sbjct: 633 TYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVE 692
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
M D+G + D++ + A G + D + ++ +
Sbjct: 693 M--TDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNR 727
>gi|357155105|ref|XP_003577009.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13800-like [Brachypodium distachyon]
Length = 821
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 31/271 (11%)
Query: 158 LLNAYACAK---------SAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
L++ ++C+K +++ A + M ++ V I Y+ +++ Y QTG+ +
Sbjct: 572 LVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDLISYSKLISAYCQTGDMRNARL 631
Query: 209 LMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
H+M ++G+ D +++L++ C E + M G+ D Y G
Sbjct: 632 WFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQM--TSLGIKPDIIAYTVLLDG 689
Query: 268 YVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
++K L + + R L++ K +R +L K + V
Sbjct: 690 HLKEDLQRRWQGISRDKRSLLLRAKQNR-----------------LLSSMKEMEIEPDV- 731
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y +I K D +E A +F+E + L D LI+ YC +G + KAE L
Sbjct: 732 -PCYTVLIDGQCKSDYLEQARGLFDEMLQKGLTPDHYAYTALINGYCSQGEVAKAEDLFQ 790
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
+ +G +P+V T+ ++ L+N Q + V
Sbjct: 791 EMVDKGIKPDVLTFSVLNRRVLRNRQDQSYV 821
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 111/251 (44%), Gaps = 6/251 (2%)
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL- 229
A I+Q++ + + I +N +M+ + ++++ L+ +G+ D Y +S L+
Sbjct: 279 AYAILQEIIREKVQVEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIR 338
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
S C + + +D AM+ G+ + + + + K G++ + +K +
Sbjct: 339 SYCKVGNLLKVLDHYQAMVS--HGLEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGL 396
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVW-KRYKQNLKVYNRGYICVISSLLKFDGMESAE 348
H Y+ + Y GN D+ +++ + L Y C+I +++A
Sbjct: 397 HID-GVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNAR 455
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+ FEE N+ D+ N L +RGL+ + LI + RG +PN T+ ++ G+
Sbjct: 456 QAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGF 515
Query: 409 LQ-NNQSEKGV 418
+ +N SE V
Sbjct: 516 CRGDNLSEAEV 526
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 109/268 (40%), Gaps = 5/268 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y ++AY + ++A ++ +M GL I Y ++ Y G+ + EM
Sbjct: 402 LYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEM 461
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ + D T++IL S + + ++ ME DRG+ + Y G+ +
Sbjct: 462 LKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHME-DRGLQPNSLTYGVVIDGFCRGDN 520
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
+A + E + N Y ++ Y G D+ ++ R + K+ +R + C
Sbjct: 521 LSEAEVLFNIVEEKGIDN-IEVLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVDR-FSC 578
Query: 334 --VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+IS L + + A + +N D+ + LI AYC+ G + A +
Sbjct: 579 SKLISDLCRDGNSQGASTVCSTMLEKNDVPDLISYSKLISAYCQTGDMRNARLWFHDMVQ 638
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVE 419
RG +V + ++ GY + ++ E
Sbjct: 639 RGLPVDVIVYTVLMNGYCKIGLMQEACE 666
>gi|356551872|ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Glycine max]
Length = 945
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 120/266 (45%), Gaps = 17/266 (6%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
++L YA AE I ++M +R V +N ++ Y Q G ++ M+E+
Sbjct: 224 SILAVYAKCGEMSCAEKIFRRMDERNCVS----WNVIITGYCQRGEIEQAQKYFDAMQEE 279
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
G++ T++IL+++ + + ++ ME+ G+ D + + SG+ + G ++
Sbjct: 280 GMEPGLVTWNILIASYSQLGHCDIAMDLMRKMES-FGITPDVYTWTSMISGFTQKGRINE 338
Query: 277 ALAVLRKSEVLMMHNK----FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYI 332
A +LR ++ + S A + + G++ + V ++ + N
Sbjct: 339 AFDLLRDMLIVGVEPNSITIASAASACASVKSLSMGSEIHSIAVKTSMVDDILIGNS--- 395
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I K +E+A+ IF+ R D+ N +I YC+ G KA L K Q
Sbjct: 396 -LIDMYAKGGDLEAAQSIFDVMLER----DVYSWNSIIGGYCQAGFCGKAHELFMKMQES 450
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGV 418
+ PNV TW +M TG++QN ++ +
Sbjct: 451 DSPPNVVTWNVMITGFMQNGDEDEAL 476
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 110/276 (39%), Gaps = 44/276 (15%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P V L++ YA ++A + +MR+R L +++M+ + ++++ L +
Sbjct: 118 PFVETKLVSMYAKCGHLDEARKVFDEMRERNL----FTWSAMIGACSRDLKWEEVVELFY 173
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
+M + G+ D + +L AC D E +++ + G+ V + + Y K
Sbjct: 174 DMMQHGVLPDDFLLPKVLKACGKFRDIE-TGRLIHSLVIRGGMCSSLHVNNSILAVYAKC 232
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
G A + R+ M + +++ +IT Y RG
Sbjct: 233 GEMSCAEKIFRR-----MDERNCVSWNVIITGYC----------------------QRGE 265
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
I E A+K F+ + + + N LI +Y + G A L+ K +
Sbjct: 266 I------------EQAQKYFDAMQEEGMEPGLVTWNILIASYSQLGHCDIAMDLMRKMES 313
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVL 427
G P+V TW M +G+ Q + + + ++ L++
Sbjct: 314 FGITPDVYTWTSMISGFTQKGRINEAFDLLRDMLIV 349
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 105/264 (39%), Gaps = 45/264 (17%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
+L++ YA E A+ I M +R + +NS++ Y Q G K L +M+E
Sbjct: 395 SLIDMYAKGGDLEAAQSIFDVMLERDVYS----WNSIIGGYCQAGFCGKAHELFMKMQES 450
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
+ T++++++ D + + +E D + + + + SG+++ DK
Sbjct: 451 DSPPNVVTWNVMITGFMQNGDEDEALNLFLRIEKDGKIKPNVASWNSLISGFLQNRQKDK 510
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVIS 336
AL + R+ M + + V+T AC N L K+ K+ + C
Sbjct: 511 ALQIFRQ----MQFSNMAPNLVTVLTILPACTN----LVAAKKVKEI-------HCCAT- 554
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
RNL ++ + N ID+Y + G + + G P
Sbjct: 555 -------------------RRNLVSELSVSNTFIDSYAKSG-----NIMYSRKVFDGLSP 590
Query: 397 -NVRTWYLMATGYLQNNQSEKGVE 419
++ +W + +GY+ + SE ++
Sbjct: 591 KDIISWNSLLSGYVLHGCSESALD 614
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y AL++ + ++A + M +G + Y++++N Y + +K L
Sbjct: 302 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 361
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME-ADRGVVLDWTVYATAASGY 268
EM K + + T+S L+ G D I E RG + D+ Y
Sbjct: 362 FEEMCRKELIPNTVTYSTLMHGLCHV--GRLQDAIALFHEMVTRGQIPDFVSYCILLDYL 419
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
K D+A+A+L+ E N D +++
Sbjct: 420 CKNRRLDEAIALLKAIE---------------------GSNMDPDIQI------------ 446
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y VI + + +E+A +F S+ L ++ +I+ C++GLL +A L +
Sbjct: 447 --YTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGE 504
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
+ +G PN T+ L+ G+L+NN++ +G++ +++ L
Sbjct: 505 MKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEML 541
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 122/322 (37%), Gaps = 51/322 (15%)
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL-SACAAASDGEGIDKIVAM 247
D+ ++ + +Y + SL H+M+ GI + YT +IL+ S C G + +
Sbjct: 61 DFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKI 120
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQY 304
++ G + + T G G + L + K M+ F Y +I
Sbjct: 121 LKL--GHQPNIATFNTLIRGLCVEGKIGEVLHLFDK----MIGEGFQPNVVTYGTLINGL 174
Query: 305 AACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR------ 357
G+ +R+ + +Q N + Y +I SL K + A +F E +
Sbjct: 175 CKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSI 234
Query: 358 -----------NLCH------------------DIRIPNHLIDAYCRRGLLHKAETLIYK 388
NLC ++ I + ++DA C+ G + +A ++
Sbjct: 235 FTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDM 294
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYY 448
RG EPNV T+ + G+ ++ ++ V+ + + P + + Y
Sbjct: 295 MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVC-----KGFAPDVVSYSTLINGY 349
Query: 449 KKERDIEGADYFIKLLTGKEII 470
K + IE A Y + + KE+I
Sbjct: 350 CKIQRIEKAMYLFEEMCRKELI 371
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 112/259 (43%), Gaps = 15/259 (5%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
L+ Y+ + +A I + + K + +N+++ Y Q G+ K+ +L +M ++G
Sbjct: 98 LIKLYSICGNVTEARQIFDSVEN----KTVVTWNALIAGYAQVGHVKEAFALFRQMVDEG 153
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
++ TF +L AC++ + G K V G V D+ + S YVK G D A
Sbjct: 154 LEPSIITFLSVLDACSSPA-GLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDA 212
Query: 278 LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVIS 336
V +H + ++ ++ YA G+ + ++ R +Q LK ++ ++
Sbjct: 213 RQVFDG-----LHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILD 267
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
+ + + + + + L DIR+ LI Y G + A + ++R
Sbjct: 268 GCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVR---- 323
Query: 397 NVRTWYLMATGYLQNNQSE 415
+V +W +M GY +N E
Sbjct: 324 DVVSWTVMIEGYAENGNIE 342
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 130/319 (40%), Gaps = 21/319 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V +L+ Y S E A + M+ R +V T+ M+ Y + GN + L M
Sbjct: 296 VATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTV----MIEGYAENGNIEDAFGLFATM 351
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+E+GI D+ T+ +++ACA +++ +I + ++ G D V Y K G
Sbjct: 352 QEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDI-AGFGTDLLVSTALVHMYAKCGA 410
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYI 332
A V M + ++ +I Y G + + K+ N++ YI
Sbjct: 411 IKDARQVFDA-----MPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYI 465
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
++++ ++ +I+ + +L + + N LI + G + +A I+ +R
Sbjct: 466 NLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERAR-YIFDTMVR 524
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKER 452
+V TW M GY + + + + + L R++P+ L +
Sbjct: 525 ---RDVITWNAMIGGYSLHGNAREALYLFDRML-----KERFRPNSVTFVGVLSACSRAG 576
Query: 453 DI-EGADYFIKLLTGKEII 470
+ EG +F LL G+ I+
Sbjct: 577 FVDEGRRFFTYLLEGRGIV 595
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 119/272 (43%), Gaps = 13/272 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY +L++AYA + E+A +++M++ G+ + Y+ ++ + + + + D E
Sbjct: 305 VYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEA 364
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+E+ + + ++ A A + + +V ME + G+ +Y T GY G
Sbjct: 365 KERHTTLNAIIYGNIIYAHCQACNMTQAEALVREME-EEGIDAPIDIYHTMMDGYTIIGN 423
Query: 274 SDKALAVL-RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-----KQNLKVY 327
+K L V R E + S Y +I Y G L V K K N+K Y
Sbjct: 424 EEKCLIVFDRLKECGFTPSVIS--YGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTY 481
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
+ +I+ ++ +A +FE+ L D+ + N++I A+C G + +A +
Sbjct: 482 S----MLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVK 537
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+ Q P RT+ + G+ ++ + +E
Sbjct: 538 EMQKERHRPTTRTFMPIIHGFARSGDMRRALE 569
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 5/132 (3%)
Query: 154 VYIALLNAYACAKSA--EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
Y ALL A C KS + A + ++M + + + T YN +++ + + G+ + LM
Sbjct: 655 TYEALLKA--CCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQ 712
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
+M+++G+ D +T++ ++AC A D + K + ME GV + Y T G+ +A
Sbjct: 713 QMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEV-VGVKPNIKTYTTLIHGWARA 771
Query: 272 GLSDKALAVLRK 283
L +KAL ++
Sbjct: 772 SLPEKALKCFQE 783
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 101/271 (37%), Gaps = 38/271 (14%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y +++ Y + EK I+ ++++ G I Y ++N+Y + G K + M
Sbjct: 410 IYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMM 469
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E GI + T+S+L++ + DW VK GL
Sbjct: 470 EVAGIKHNMKTYSMLINGFVR--------------------LKDWANAFAVFEDVVKDGL 509
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYI 332
K +V++ Y+ +I + GN D +R K K+ + R ++
Sbjct: 510 ---------KPDVVL--------YNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFM 552
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I + M A +IF+ + N LI + + KA ++ + L
Sbjct: 553 PIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLA 612
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G PN T+ + GY + K E K
Sbjct: 613 GISPNEHTYTTIMHGYASLGDTGKAFEYFTK 643
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 107/251 (42%), Gaps = 7/251 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+N + K A + + + GL + YN+++ + GN + + EM
Sbjct: 480 TYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEM 539
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+++ TF ++ A + D +I MM G + + G V+
Sbjct: 540 QKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWS-GCIPTVHTFNALILGLVEKCQ 598
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN---LKVYNRG 330
+KA+ +L + + + + Y ++ YA+ G+ + + K L VY
Sbjct: 599 MEKAVEILDEMSLAGI-SPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYT-- 655
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y ++ + K M+SA + E S+ + + + N LID + RRG + +A L+ + +
Sbjct: 656 YEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMK 715
Query: 391 LRGTEPNVRTW 401
G +P++ T+
Sbjct: 716 QEGVQPDIHTY 726
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 114/272 (41%), Gaps = 40/272 (14%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++ +++ +A + +A I MR G + +N+++ + +K ++ EM
Sbjct: 550 TFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEM 609
Query: 214 EEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
GI +++T++ ++ A+ D G+ + + G+ LD Y K+G
Sbjct: 610 SLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKL--KTEGLELDVYTYEALLKACCKSG 667
Query: 273 LSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
ALAV R+ S + N F Y+ +I +A G+ VW+
Sbjct: 668 RMQSALAVTREMSSQKIPRNTF--VYNILIDGWARRGD------VWE------------- 706
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
A ++ ++ + + DI I+A C+ G + +A I + ++
Sbjct: 707 ---------------AAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEV 751
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G +PN++T+ + G+ + + EK ++ ++
Sbjct: 752 VGVKPNIKTYTTLIHGWARASLPEKALKCFQE 783
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 105/268 (39%), Gaps = 44/268 (16%)
Query: 144 CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
C+P ++ + L+ C EKA I+ +M G+ Y ++M+ Y G+
Sbjct: 579 CIPTVHTFNALILGLVEK--C--QMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDT 634
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYAT 263
K +++ +G++ D YT+ LL AC
Sbjct: 635 GKAFEYFTKLKTEGLELDVYTYEALLKACC------------------------------ 664
Query: 264 AASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ 322
K+G ALAV R+ S + N F Y+ +I +A G+ + + ++ KQ
Sbjct: 665 ------KSGRMQSALAVTREMSSQKIPRNTF--VYNILIDGWARRGDVWEAAELMQQMKQ 716
Query: 323 -NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
++ Y I++ K M+ A K +E E + +I+ LI + R L K
Sbjct: 717 EGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEK 776
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYL 409
A + + G +P+ ++ + T L
Sbjct: 777 ALKCFQEMKSAGLKPDKAVYHCLMTSLL 804
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 11/130 (8%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY L++ +A +A +MQQM+ G+ Y S +N + G+ ++ + EM
Sbjct: 690 VYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEM 749
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVY----------AT 263
E G+ + T++ L+ A AS E K M++ G+ D VY A+
Sbjct: 750 EVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKS-AGLKPDKAVYHCLMTSLLSRAS 808
Query: 264 AASGYVKAGL 273
A Y+ +G+
Sbjct: 809 VAEEYIYSGV 818
>gi|255551665|ref|XP_002516878.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543966|gb|EEF45492.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 714
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 139/316 (43%), Gaps = 11/316 (3%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P + AL+ ++ +A II +M +G I YN++M+ Y ++ ++++ +
Sbjct: 333 PEILGALVKSFCDEGLKNEALIIQVEMAKKGAFSNAIVYNTLMDAYNKSNQIEEVEGIFA 392
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
EM+ KG+ TF+IL+ A + E +++++ M+ D G+ D Y S Y +
Sbjct: 393 EMKAKGLKPTSATFNILMDAYSRRMQPEIVEELLLEMQ-DAGLQPDAKSYTCLISAYGRQ 451
Query: 272 G-LSDKAL-AVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYN 328
++D A A LR +V + S +Y +I Y+ G + ++ + + +K
Sbjct: 452 NKMTDMAANAFLRMKKVGI--KPTSHSYTALIHAYSVSGWHEKAYSTFENMQTEGIKPSI 509
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y ++ + + ++ +I++ S + N L+D + ++G +A +I +
Sbjct: 510 ETYTALLDAFRRSGDTQTLMRIWKMMMSEKVEGTRVTFNILLDGFAKQGHYVEARDVISE 569
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYY 448
G P V T+ ++ Y + Q K + +K+ L KP + Y
Sbjct: 570 FGKLGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMATL-----NLKPDSITYLTMIYAY 624
Query: 449 KKERDIEGADYFIKLL 464
+ RD A ++ K +
Sbjct: 625 IRVRDFRRAFFYHKTM 640
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/347 (19%), Positives = 155/347 (44%), Gaps = 20/347 (5%)
Query: 135 IEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
E A+ F + +K P Y + ++ + E+A ++ ++ + GLV + YN+
Sbjct: 268 FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNA 327
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+++ G+ K + EM +GI +T+++L+ A E + ++ M ++
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMR-EK 386
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD 312
GV D Y +GY + G + KAL++ + M+ + + G ++
Sbjct: 387 GVEPDVVTYNIQINGYCRCGNAKKALSLFDE----MVEKNIRPTVETYTSLIDVFGKRNR 442
Query: 313 VLRVWKRYKQNLKVYNRGYICVISSLLKFDG------MESAEKIFEEWESRNLCHDIRIP 366
+ +++K+++K I + ++L+ DG ++ A ++ +E ++ + D
Sbjct: 443 MSEAEEKFKKSIKEGMLPDIIMFNALI--DGHCVNGNIDRAFQLLKEMDNAKVVPDEVTF 500
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
N L+ YCR + +A+ L+ + + RG +P+ ++ + +GY + + +E + L
Sbjct: 501 NTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLS 560
Query: 427 LLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISAD 473
L + P+ A + Y K + + A+ ++ + K I D
Sbjct: 561 L-----GFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDD 602
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 118/251 (47%), Gaps = 7/251 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L++A K E+AE ++++MR++G+ + YN +N Y + GN KK SL EM
Sbjct: 359 TYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEM 418
Query: 214 EEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
EK I T++ L+ + E +K ++ G++ D ++ G+ G
Sbjct: 419 VEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIK--EGMLPDIIMFNALIDGHCVNG 476
Query: 273 LSDKALAVLRKSE-VLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRG 330
D+A +L++ + ++ ++ + ++ ++ Y ++ ++ K+ +K +
Sbjct: 477 NIDRAFQLLKEMDNAKVVPDEVT--FNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHIS 534
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +IS K M+ A ++F+E S + N LI Y + G AE L+ + Q
Sbjct: 535 YNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQ 594
Query: 391 LRGTEPNVRTW 401
+G P+ T+
Sbjct: 595 SKGITPDDSTY 605
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 114/261 (43%), Gaps = 17/261 (6%)
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+ ++M + + +N M+N+ + G +KK + ME G+ + T++ +++
Sbjct: 203 FVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGY 262
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS-EVLMMHN 291
E KI M+ D+ + D Y + S K ++A VL K E ++ N
Sbjct: 263 CLRGKFEAASKIFKTMK-DKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPN 321
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-------YICVISSLLKFDGM 344
+ Y+ +I C NK D+ + + Y+ + NRG Y +I +L +
Sbjct: 322 AVT--YNALID---GCCNKGDLDKAFA-YRDEM--MNRGIVASVFTYNLLIHALFLEKRI 373
Query: 345 ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
E AE + +E + + D+ N I+ YCR G KA +L + + P V T+ +
Sbjct: 374 EEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSL 433
Query: 405 ATGYLQNNQSEKGVEAMKKAL 425
+ + N+ + E KK++
Sbjct: 434 IDVFGKRNRMSEAEEKFKKSI 454
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 134/307 (43%), Gaps = 23/307 (7%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K + IE+A+ + E +P+ Y AL++ +KA +M +RG+V
Sbjct: 297 LCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVAS 356
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIV 245
YN +++ + ++ + ++ EM EKG++ D T++I ++ C + + +
Sbjct: 357 VFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFD 416
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKS-------EVLMMHNKFSRAYD 298
M+E + ++ Y + + K +A +KS +++M ++
Sbjct: 417 EMVEKNIRPTVE--TYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIM--------FN 466
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNLKVY--NRGYICVISSLLKFDGMESAEKIFEEWES 356
+I + GN D ++ K N KV + ++ + +E A+K+ +E +
Sbjct: 467 ALIDGHCVNGNIDRAFQLLKEM-DNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKE 525
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
R + D N LI Y +RG + A + + G +P + T+ + GY + +++
Sbjct: 526 RGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADH 585
Query: 417 GVEAMKK 423
E +++
Sbjct: 586 AEELLRE 592
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 128/285 (44%), Gaps = 9/285 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++ L+ A A A ++ +++ L + YN ++ + + GN HE+
Sbjct: 82 LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHEL 141
Query: 214 EEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ +G+ D ++ S++ C A GE +++ A MEA+R V + Y T GY AG
Sbjct: 142 KAQGLKPDDVSYTSMIWVLCKAGRLGEA-EELFAQMEAERSVPCAYA-YNTMIMGYGSAG 199
Query: 273 LSDKALAVL-RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
+ A +L R E + + S ++ ++T D+ L +++ K++ + + Y
Sbjct: 200 RFEDAYKLLERLRERGCIPSVVS--FNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTY 257
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I L +E A +I +E E +L ++ N ++D C+ L +A + A
Sbjct: 258 NIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQ 317
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKP 436
RG P+ T+ + G + Q ++ +K +L+AG P
Sbjct: 318 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEK---MLDAGHNANP 359
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 145/347 (41%), Gaps = 21/347 (6%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNF--VLTPADV 122
D + L + ++ P + III L R A +I M S F +LT V
Sbjct: 237 DEALSLFEVMKKDAEP-NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLT---V 292
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRD 180
I +D + K + +E+A F ++ P Y +L++ ++A + ++M D
Sbjct: 293 NIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLD 352
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
G + Y S++ ++ G + + E+ +G D + + A +
Sbjct: 353 AGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGE--- 409
Query: 241 IDKIVAMMEADR--GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---R 295
++K + E R G + D Y+ G KAG + + + M F+ R
Sbjct: 410 VEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHA----MKQQGFALDAR 465
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
AY+ V+ + G + + K+ ++ Y ++ L K D ++ A +FEE
Sbjct: 466 AYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEA 525
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+S+ + ++ + + LID + + G + +A ++ + +G PNV TW
Sbjct: 526 KSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTW 572
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/367 (19%), Positives = 134/367 (36%), Gaps = 80/367 (21%)
Query: 117 LTPADVAIR--LDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAE 172
L P DV+ + ++ K + +A F + + +P Y ++ Y A E A
Sbjct: 146 LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAY 205
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLM--HEMEEKGIDCDKYTFSILLS 230
+++++R+RG + + +NS++ G +K+D + E+ +K + + T++I++
Sbjct: 206 KLLERLRERGCIPSVVSFNSILTC---LGKKRKVDEALSLFEVMKKDAEPNSSTYNIIID 262
Query: 231 ACAAASDGEGIDKIVAMME----------------------------------ADRGVVL 256
E +I+ ME + RG
Sbjct: 263 MLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNP 322
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV 316
D Y + G K G D+A + K + HN Y +I + G K+D +V
Sbjct: 323 DCVTYCSLIDGLGKKGQVDEAYRLFEKM-LDAGHNANPVVYTSLIRNFFIHGRKEDGHKV 381
Query: 317 WKRY-----KQNLKVYN-------------------------------RGYICVISSLLK 340
+K K +L + N R Y +I L K
Sbjct: 382 FKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTK 441
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
IF + + D R N ++D +C+ G +HKA ++ + + + +P V T
Sbjct: 442 AGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVAT 501
Query: 401 WYLMATG 407
+ + G
Sbjct: 502 YGAIVDG 508
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/257 (19%), Positives = 102/257 (39%), Gaps = 3/257 (1%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P VY +L+ + E + +++ RG N+ M+ ++ G +K +
Sbjct: 359 PVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFE 418
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
++ G D ++SIL+ A I M+ +G LD Y G+ K+
Sbjct: 419 DIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK-QQGFALDARAYNAVVDGFCKS 477
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRG 330
G KA +L + + + + Y ++ A D+ +++ K + +++
Sbjct: 478 GKVHKAYEILEEMKEKCVQPTVA-TYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVL 536
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I K ++ A I EE + L ++ N L+DA + +++A +
Sbjct: 537 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK 596
Query: 391 LRGTEPNVRTWYLMATG 407
PN T+ ++ G
Sbjct: 597 EMKCPPNTYTYSILING 613
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 113/286 (39%), Gaps = 42/286 (14%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K +E+ F + LP V Y L++ A A + I M+ +G
Sbjct: 401 MDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGF 460
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
YN++++ + ++G K ++ EM+EK + T+ ++ A + +D+
Sbjct: 461 ALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKI---DRLDE 517
Query: 244 IVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVI 301
+ E +G+ L+ +Y++ G+ K G D+A +L + MM
Sbjct: 518 AYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE----MMK----------- 562
Query: 302 TQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
K N+ +N ++ +L+K + + A F+ +
Sbjct: 563 ----------------KGLTPNVYTWNS----LLDALVKAEEINEALVCFQSMKEMKCPP 602
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+ + LI+ CR +KA Q +G PNV T+ M +G
Sbjct: 603 NTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISG 648
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 110/250 (44%), Gaps = 13/250 (5%)
Query: 111 KKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSA 168
K+ F L +D K + +A + EK P+V Y A+++ A
Sbjct: 456 KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRL 515
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
++A ++ ++ + +G+ + Y+S+++ + + G + ++ EM +KG+ + YT++ L
Sbjct: 516 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 575
Query: 229 LSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
L A A + E + +M E + Y+ +G + +KA + +
Sbjct: 576 LDALVKAEEINEALVCFQSMKEMK--CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQ 633
Query: 288 -MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMES 346
++ N + Y +I+ A GN D +++R+K N + + + +GM +
Sbjct: 634 GLVPNVVT--YTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNAL-----IEGMSN 686
Query: 347 AEKIFEEWES 356
A + E +++
Sbjct: 687 ANRAMEAYQT 696
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 145/346 (41%), Gaps = 23/346 (6%)
Query: 86 LRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCV 145
+ ++IKK RL K L M+ + V+T + +D KV + A F +
Sbjct: 430 INVLIKKCRL-KEAKETLN-EMFANGLAPNVVTYTSI---IDGYCKVGMVGAALEVFKLM 484
Query: 146 PEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
+ P+ Y +L+ K KA ++ +M++ G+ I Y +++ + +
Sbjct: 485 EHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEF 544
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
L ME+ G+ D+ +++L A C + E +V +GVVL Y
Sbjct: 545 DNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV-----RKGVVLTKVTYT 599
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA--YDFVITQYAACGNK--DDVLRVWK 318
+ G+ KAG +D A ++ K M N+ +A Y + + A C K ++ L +
Sbjct: 600 SLVDGFSKAGNTDFAAVLIEK-----MVNEGCKADLYTYSVLLQALCKQKKLNEALSILD 654
Query: 319 RYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
+ +K Y +IS ++K + A+ +F E S I +YC+ G
Sbjct: 655 QMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIG 714
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ +AE LI + + G P+V T+ + G ++ +K+
Sbjct: 715 RIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKR 760
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 104/256 (40%), Gaps = 43/256 (16%)
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILL 229
A ++ +M RG+V YN+M++ Y ++G K + ME+ G + D +T+ S++
Sbjct: 303 ARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIY 362
Query: 230 SACAAASDG--EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
C D E ++ +A RG + +GY KA D AL V KS ++
Sbjct: 363 GLCGGKLDEAEELLNGAIA-----RGFTPTVITFTNLINGYCKAERIDDALRV--KSNMI 415
Query: 288 MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESA 347
N K+ + Y +I+ L+K ++ A
Sbjct: 416 ---------------------------------SSNCKLDLQAYGVLINVLIKKCRLKEA 442
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
++ E + L ++ +ID YC+ G++ A + + G PN T+ + G
Sbjct: 443 KETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYG 502
Query: 408 YLQNNQSEKGVEAMKK 423
+Q+ + K + + K
Sbjct: 503 LIQDKKLHKAMALITK 518
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 112/260 (43%), Gaps = 9/260 (3%)
Query: 144 CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
C P + Y LL+ + E+A ++ +M +G + YN ++ + G
Sbjct: 411 CTPNLI----TYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKV 466
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYAT 263
K ++ EM +KG D +TF+ L+ E + M D GV+ + Y T
Sbjct: 467 PKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLD-GVIANTVTYNT 525
Query: 264 AASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVITQYAACGNKDDVLRVW-KRYK 321
+++ G +AL ++ +++L Y+ +I + G + L ++ + +
Sbjct: 526 LIHAFLRGGAIQEALKLV--NDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVR 583
Query: 322 QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
++L N +I+ L + + +A ++ + R L D+ N LI+ C+ G + +
Sbjct: 584 KDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIRE 643
Query: 382 AETLIYKAQLRGTEPNVRTW 401
A L K Q G +P+ T+
Sbjct: 644 AFNLFNKLQAEGIQPDAITY 663
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 141/360 (39%), Gaps = 18/360 (5%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQIS-MWMTKKSNFVLTPA--DVAIRL 126
LL Q EEG E L I I K+ Y R + Q + M + K + P + L
Sbjct: 124 LLLQIKEEGIAFR-ESLFICIMKY--YGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVL 180
Query: 127 DLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLV 184
D++ AA+ F + K +P+VY ++ A + A +++ M G V
Sbjct: 181 DILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCV 240
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFS-ILLSACAAASDGEGIDK 243
++ Y ++++ + + L+ EM G D TF+ ++ C EG
Sbjct: 241 PNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKL 300
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ 303
+ M+ RG + Y +G + G D+A +L K + + +I
Sbjct: 301 VDRMLF--RGFTPNDITYGVLMNGLCRVGKVDEAQVLLNK-----VPTPNDVHFTILING 353
Query: 304 YAACGNKDDVLRVW--KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
Y G D+ K K + + +I L K M SA + + +
Sbjct: 354 YVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTP 413
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
++ L+D +C++ L +A ++ + +G E N+ + ++ +N + K ++ +
Sbjct: 414 NLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDML 473
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 117/264 (44%), Gaps = 21/264 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V L+N Y +S E+A + ++M +R +V + SM++ Q G++ K+ ++ EM
Sbjct: 158 VMSGLVNYYGAFRSVEEASKVFEEMYERDVVS----WTSMISACAQCGHWDKVLKMLSEM 213
Query: 214 EEKGIDCDKYTFSILLSACA---AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
+ +GI +K T LLSAC A +G + V G+ D + S Y K
Sbjct: 214 QAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKF----GIEADVDIRNALISMYTK 269
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNR 329
G AL + M +++++++ +I + + LR+++ +
Sbjct: 270 CGCLSDALEAFQA-----MPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGI 324
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
+ V+S+ + + + + +C D + N LI+ Y + G + AE +
Sbjct: 325 TLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTM 384
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQ 413
T+ +V +W +M GY++ +Q
Sbjct: 385 ----TKKDVVSWTVMVCGYVKGHQ 404
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 124/284 (43%), Gaps = 45/284 (15%)
Query: 151 LPSVYIALLNAYACAKS--AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
+P++Y+ +AC+KS E+AE I+ +M +G+V YN+++ +Y + G + + S
Sbjct: 197 VPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALS 256
Query: 209 LMHEMEEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
+ +ME +GI+ D ++ S++ C E + M + + + Y T G
Sbjct: 257 VQDKMEREGINLDIVSYNSLIYGFCKEGKMREAM----RMFGEIKDAIPNHVTYTTLIDG 312
Query: 268 YVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
Y KA ++A LR E+++ Y V+T + +LR K+
Sbjct: 313 YCKANEFEEA---LRLREMMVAKG----LYPGVVTY-------NSILR---------KLC 349
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
+ G I A K+ E R + D N LI+AYC+ G L+ A
Sbjct: 350 SDGRI------------RDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKT 397
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAG 431
K G PN T+ + G+ + ++ E E + +L+AG
Sbjct: 398 KMLEAGLTPNSFTYKALIHGFCKTSELESAKELL---FGMLDAG 438
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 102/248 (41%), Gaps = 11/248 (4%)
Query: 135 IEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
+ +A F + + + Y L++ Y A E+A + + M +GL + YNS++
Sbjct: 286 MREAMRMFGEIKDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSIL 345
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRG 253
G + + L+HEM E+ + D T + L++A C + M+EA G
Sbjct: 346 RKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEA--G 403
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDFVITQYAACGNK 310
+ + Y G+ K + A +L M+ FS R Y +++ Y N
Sbjct: 404 LTPNSFTYKALIHGFCKTSELESAKELLFG----MLDAGFSPNYRTYSWIVDSYCKKDNT 459
Query: 311 DDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
D VL + + N Y +I L K + +E AEK+ E + + D I L
Sbjct: 460 DAVLALPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYHMEGKGISGDSVIYTSL 519
Query: 370 IDAYCRRG 377
+Y + G
Sbjct: 520 AFSYWKSG 527
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 15/115 (13%)
Query: 316 VWKRYKQ--------NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
VWK YK+ N+ VYN C+I + K +E AE I E E + + DI N
Sbjct: 184 VWKVYKRMVQDGVVPNIYVYN----CLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYN 239
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
LI YC++GL ++A ++ K + G ++ ++ + G+ + K EAM+
Sbjct: 240 TLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEG---KMREAMR 291
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 120/270 (44%), Gaps = 21/270 (7%)
Query: 176 QQMRDRGLVKKTIDYNSMMNVYYQT---------GNYKKLDSLMHEMEEKGIDCDKYTFS 226
Q + G KK +++ + VY T G ++ LM EM KGI + T++
Sbjct: 195 QMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYN 254
Query: 227 ILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV 286
L++A D EG+++++ +ME D+ VV + Y Y +G +A V K
Sbjct: 255 TLVNAYIKIMDFEGVNEMLRLMEMDK-VVYNAATYTLLIEWYGSSGKIAEAEKVFEK--- 310
Query: 287 LMMHNKFS---RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFD 342
M+ + +I+ GN ++ + V N Y +I
Sbjct: 311 -MLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSG 369
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
+++AE + E +S+ L ++ I N LI+ YC++G++ +A + + +G E ++ T+
Sbjct: 370 QLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYN 429
Query: 403 LMATGYLQNNQSEKGVEAMKKALVLLEAGT 432
+A G + N+ E EA + ++E G
Sbjct: 430 TIAGGLCKLNRHE---EAKRWLFTMVEKGV 456
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 113/256 (44%), Gaps = 36/256 (14%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y L+ Y + +AE + ++M +RG+ + S+++ + GN K+ +L E
Sbjct: 286 ATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDE 345
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ E+G+ + +T+ L+ + + + +V M++ +G+ ++ ++ T +GY K G
Sbjct: 346 LNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQS-QGLDMNLVIFNTLINGYCKKG 404
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYI 332
+ D+AL + DV+ K ++ ++ YN
Sbjct: 405 MIDEALRM------------------------------QDVME-KKGFENDIFTYNT--- 430
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+ L K + E A++ + + + +ID +C+ G L +AE + + +
Sbjct: 431 -IAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKK 489
Query: 393 GTEPNVRTWYLMATGY 408
G +PNV T+ + GY
Sbjct: 490 GEKPNVVTYNTLIDGY 505
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 96/219 (43%), Gaps = 10/219 (4%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKS--NFVLTPADV 122
D+ L+++ +G +++ +I + AL++ M KK N + T +
Sbjct: 372 DAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTI 431
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRD 180
A L K+ E+A + + EK P+ + +++ + + +AE + Q M+
Sbjct: 432 AGGL---CKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKK 488
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGE 239
+G + YN++++ Y + G K+ L EME G+ D YT++ L+ C E
Sbjct: 489 KGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEE 548
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKAL 278
+ + + +G+ + Y SG K G S++A
Sbjct: 549 ALTLLNEV--CRKGLAISIVTYTAIISGLSKEGRSEEAF 585
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 117/282 (41%), Gaps = 9/282 (3%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
I + G+ + CVP + Y LLN Y + + +M+
Sbjct: 338 IKEAMGVFRQMQGAGCVPNA----ATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAA 393
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMM 248
YN ++NV+ + G +K++ +L H+M E+ ++ + T+ L+ AC E KI+ M
Sbjct: 394 TYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHM 453
Query: 249 EADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAAC 307
++GVV Y Y +A L ++AL +EV Y+ +I +A
Sbjct: 454 N-EKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEV--GSKPTVETYNSLIQMFAKG 510
Query: 308 GNKDDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
G + + + Q+ NR + VI + + E A K + E E D +
Sbjct: 511 GLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTL 570
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
++ YC GL+ ++E + + G P+V + +M Y
Sbjct: 571 EAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVY 612
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 137/338 (40%), Gaps = 46/338 (13%)
Query: 75 VEEGR-PLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKS--NFVLTPADVAIRLDLIAK 131
VE+G+ D+E L I K L R S A + ++ K S +F L + A R D
Sbjct: 72 VEKGKYSYDVETL--INKLSSLPPRGSIARCLDVFKNKLSLNDFALVFKEFAQRGDWQRS 129
Query: 132 VQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYN 191
++ + C P + +Y ++ EK + I +M G+ +
Sbjct: 130 LRLFKYMQRQIWCKPNE----HIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFT 185
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS-DGEGIDKIVAMMEA 250
+++N Y + G YK L+ M+++ + T++ ++++CA D E + + A M
Sbjct: 186 ALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRH 245
Query: 251 DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK 310
+ G+ D Y T S + GL D+A V R N+
Sbjct: 246 E-GIQADIVTYNTLLSACARRGLGDEAEMVFRTM------------------------NE 280
Query: 311 DDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+L ++ Y+ ++ + K + +E ++ +E ES DI N L+
Sbjct: 281 GGIL-------PDITTYSY----LVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLL 329
Query: 371 DAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+A+ + G + +A + + Q G PN T+ ++ Y
Sbjct: 330 EAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLY 367
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 148/343 (43%), Gaps = 36/343 (10%)
Query: 91 KKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLK 150
K F L+ + IS + + NF+ + + ++ A S FN + +
Sbjct: 10 KSFNLFNFLKIPISISFLILLQKNFIPYSS-----ISTTFHSNDVDGAVSLFNSLLHQN- 63
Query: 151 LPSV----YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKL 206
P++ + +L + +K + QQM G+ + +N ++N + Q G
Sbjct: 64 -PTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFA 122
Query: 207 DSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI---DKIVAMMEADRGVVLDWTVYA 262
S++ ++ + G + D T + + C + + DK+VA+ G LD Y
Sbjct: 123 FSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVAL-----GFHLDQVSYG 177
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW----- 317
T +G K G + AL +LR+ + ++ + Y+ VI + + +D ++
Sbjct: 178 TLINGLCKVGETRAALQLLRRVDGKLVQLN-AVMYNTVIDGMSKDKHVNDAFDLYSEMVA 236
Query: 318 KRYKQNLKVYN---RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
KR ++ Y+ RG+ V ++ A +F + N+ D+ N L+D +C
Sbjct: 237 KRISPDVVTYSALIRGFFIV-------GKLKDAIDLFNKMILENIKPDVYTFNILVDGFC 289
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ G L KA+ ++ ++ +PNV T+ + G+ ++ + ++G
Sbjct: 290 KEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEG 332
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 104/252 (41%), Gaps = 9/252 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y +++ + K A + +M + + + Y++++ ++ G K L ++M
Sbjct: 210 MYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKM 269
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ I D YTF+IL+ + ++ MM + + + + + T G+ K
Sbjct: 270 ILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMI-QDIKPNVSTFNTLVDGFCK--- 325
Query: 274 SDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-R 329
D+ + + +MM Y ++ Y + +++ Q N
Sbjct: 326 -DRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVH 384
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y +I+ K ++ A K+F E +++ D+ N LID C+ G + A L+ +
Sbjct: 385 SYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEM 444
Query: 390 QLRGTEPNVRTW 401
RG PN+ T+
Sbjct: 445 HDRGQPPNIITY 456
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 107/258 (41%), Gaps = 17/258 (6%)
Query: 2 KLVRLRTTLYNIKAQLGLGNVLDSSSSYSTATGTSTREVTISLRKGSSMYKLYRMLSPMG 61
KLV+L +YN G+ + ++ + + ++ + S++ + + ++ +
Sbjct: 202 KLVQLNAVMYNTVID-GMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLK 260
Query: 62 DPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKF----RLYKRFSHALQISMWMTKKSNFVL 117
D D L ++ + E D+ I++ F RL K+ + L + M K N
Sbjct: 261 DAID----LFNKMILENIKPDVYTFNILVDGFCKEGRL-KKAKNVLDMMMIQDIKPNV-- 313
Query: 118 TPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIM 175
+ +D K + +++ + F + ++ P+V Y +L++ Y K KA+ I
Sbjct: 314 --STFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIF 371
Query: 176 QQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAA 235
M RG+ YN M+N + + K L EM K I D T++ L+ +
Sbjct: 372 NTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKS 431
Query: 236 SDGEGIDKIVAMMEADRG 253
++V M DRG
Sbjct: 432 GKISYAFQLVNEMH-DRG 448
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 152/354 (42%), Gaps = 11/354 (3%)
Query: 68 VPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLD 127
V L D+ E+G D + I+I L K L I + K N + +D
Sbjct: 97 VQLFDEMTEKGLFGDAKTYGILING--LCKARKTGLAIKLHEKMKGNCKGDVFTYGMIID 154
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+ K +A F+ + LP V Y +L++ ++A ++M RG+
Sbjct: 155 SLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISA 214
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKI 244
YNS+++ + G +K++ ++ M ++G D +TF+IL+ C GE +I
Sbjct: 215 DVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEA-QQI 273
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQ 303
+ +M +G D Y T +G G + A + ++ + N FS Y+ +I
Sbjct: 274 LELMH-HKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFS--YNILING 330
Query: 304 YAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
Y D+ R+++ + + LK Y +I +L + + +A+K+F E ++
Sbjct: 331 YCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLK 390
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ L+D C+ G L +A L + +PN+ + ++ G + + E+
Sbjct: 391 LSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEE 444
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 122/305 (40%), Gaps = 42/305 (13%)
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRD 180
I +D + K + +A + K K P + Y L+N E A + + + D
Sbjct: 255 TILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLAD 314
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
RG+ YN ++N Y + + L EM KG+ T++ L+ A +
Sbjct: 315 RGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRT 374
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
K+ M+ G L + Y G K G ++A+
Sbjct: 375 AQKLFVEMQT-CGQFLKLSTYCVLLDGLCKNGHLEEAI---------------------- 411
Query: 301 ITQYAACGNKDDVLRVWKR--YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
D+ + K+ +K N++V++ ++ + + +E A K F+E
Sbjct: 412 -----------DLFQSIKKTEHKPNIEVFS----ILLDGMCRAGKLEEAWKQFDEISKNG 456
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
L D N LI+ C +G+L +A L+++ + +G P+ T+ ++ L+ N+ + +
Sbjct: 457 LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAI 516
Query: 419 EAMKK 423
+ +++
Sbjct: 517 QLLEE 521
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 131/307 (42%), Gaps = 12/307 (3%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNF--VLTPADVAIRLD 127
L+ V+ G D I+I + A QI M K +LT + L
Sbjct: 238 FLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLC 297
Query: 128 LIAKVQGIEQAASYFNCVPEK-LKLPSV-YIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
L+ + +E A F + ++ +KL Y L+N Y + ++A + ++MR +GL
Sbjct: 298 LVGQ---LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKP 354
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKI 244
T+ YN+++ Q+G + L EM+ G T+ +LL C E ID
Sbjct: 355 STVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLF 414
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
++ + + ++ V++ G +AG ++A + + + AY+ +I
Sbjct: 415 QSIKKTEHKPNIE--VFSILLDGMCRAGKLEEAWKQFDEISKNGLEPD-TIAYNILINGL 471
Query: 305 AACGNKDDVLR-VWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
G + ++ +W+ ++ + + +I +LLK + + A ++ EE +RN D
Sbjct: 472 CNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDE 531
Query: 364 RIPNHLI 370
+ + L+
Sbjct: 532 AVTSMLL 538
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 162/395 (41%), Gaps = 37/395 (9%)
Query: 42 ISLRKGSSMYKLYRMLSPM--GDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRF 99
+ L G S+ L +L+ G+ V L+DQ VE G D ++ + +
Sbjct: 137 MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 196
Query: 100 SHALQISMWMTKKSNFVLTPADVAIRLDLI---AKVQGI------EQAASYFNCVPEKLK 150
S A+ + M K + DL+ A + G+ + A + N + EK K
Sbjct: 197 SEAVALVERMVVK----------GCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGK 245
Query: 151 LPS---VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLD 207
+ + +Y +++ K + A + +M +G+ YN +++ G +
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Query: 208 SLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
L+ +M EK I+ D F+ L+ A +K+ M + D Y T G
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Query: 268 YVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-----YK 321
+ K ++ + V R+ S+ ++ N + Y +I + + D+ V+K+
Sbjct: 366 FCKYKRVEEGMEVFREMSQRGLVGNTVT--YTTLIHGFFQARDCDNAQMVFKQMVSDGVH 423
Query: 322 QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
++ YN ++ L +E+A +FE + R++ DI +I+A C+ G +
Sbjct: 424 PDIMTYN----ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED 479
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
L L+G +PNV T+ M +G+ + E+
Sbjct: 480 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 514
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 112/270 (41%), Gaps = 15/270 (5%)
Query: 162 YACAKSA-EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
Y C +S A I+ +M G + NS++N + + +L+ +M E G
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 221 DKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV 280
D TF+ L+ + +V M +G D Y +G K G D AL +
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVV-KGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 281 LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVYNRGYICVI 335
L K E + Y+ +I + DD ++ K K ++ YN +I
Sbjct: 238 LNKMEKGKIEADVV-IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP----LI 292
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
S L + A ++ + +N+ D+ N LIDA+ + G L +AE L Y ++
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL-YDEMVKSKH 351
Query: 396 --PNVRTWYLMATGYLQNNQSEKGVEAMKK 423
P+V + + G+ + + E+G+E ++
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 134/312 (42%), Gaps = 11/312 (3%)
Query: 120 ADVAIR---LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEII 174
ADV I +D + K + ++ A FN + K P V Y L++ A +
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRL 307
Query: 175 MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM-EEKGIDCDKYTFSILLSA-C 232
+ M ++ + + +N++++ + + G + + L EM + K D ++ L+ C
Sbjct: 308 LSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
EG++ M + RG+V + Y T G+ +A D A V ++ +H
Sbjct: 368 KYKRVEEGMEVFREM--SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWK-RYKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
Y+ ++ GN + L V++ K+++K+ Y +I +L K +E +F
Sbjct: 426 I-MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
+ + ++ ++ +CR+GL +A+ L + + G PN T+ + L++
Sbjct: 485 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRD 544
Query: 412 NQSEKGVEAMKK 423
E +K+
Sbjct: 545 GDEAASAELIKE 556
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 128/285 (44%), Gaps = 9/285 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++ L+ A A A ++ +++ L + YN ++ + + GN HE+
Sbjct: 216 LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHEL 275
Query: 214 EEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ +G+ D ++ S++ C A GE +++ A MEA+R V + Y T GY AG
Sbjct: 276 KAQGLKPDDVSYTSMIWVLCKAGRLGEA-EELFAQMEAERSVPCAYA-YNTMIMGYGSAG 333
Query: 273 LSDKALAVL-RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGY 331
+ A +L R E + + S ++ ++T D+ L +++ K++ + + Y
Sbjct: 334 RFEDAYKLLERLRERGCIPSVVS--FNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTY 391
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I L +E A +I +E E +L ++ N ++D C+ L +A + A
Sbjct: 392 NIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQ 451
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKP 436
RG P+ T+ + G + Q ++ +K +L+AG P
Sbjct: 452 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEK---MLDAGHNANP 493
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 137/324 (42%), Gaps = 20/324 (6%)
Query: 88 IIIKKFRLYKRFSHALQISMWMTKKSNF--VLTPADVAIRLDLIAKVQGIEQAASYFNCV 145
III L R A +I M S F +LT V I +D + K + +E+A F
Sbjct: 393 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLT---VNIMVDRLCKARKLEEAYKIFESA 449
Query: 146 PEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
++ P Y +L++ ++A + ++M D G + Y S++ ++ G
Sbjct: 450 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 509
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR--GVVLDWTVY 261
+ + E+ +G D + + A + ++K + E R G + D Y
Sbjct: 510 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGE---VEKGRMIFEDIRSYGFLPDVRSY 566
Query: 262 ATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDFVITQYAACGNKDDVLRVWK 318
+ G KAG + + + M F+ RAY+ V+ + G + +
Sbjct: 567 SILIHGLTKAGQARETSNIFHA----MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILE 622
Query: 319 RYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
K+ ++ Y ++ L K D ++ A +FEE +S+ + ++ + + LID + + G
Sbjct: 623 EMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVG 682
Query: 378 LLHKAETLIYKAQLRGTEPNVRTW 401
+ +A ++ + +G PNV TW
Sbjct: 683 RIDEAYLILEEMMKKGLTPNVYTW 706
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/367 (19%), Positives = 134/367 (36%), Gaps = 80/367 (21%)
Query: 117 LTPADVAIR--LDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAE 172
L P DV+ + ++ K + +A F + + +P Y ++ Y A E A
Sbjct: 280 LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAY 339
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLM--HEMEEKGIDCDKYTFSILLS 230
+++++R+RG + + +NS++ G +K+D + E+ +K + + T++I++
Sbjct: 340 KLLERLRERGCIPSVVSFNSILTCL---GKKRKVDEALSLFEVMKKDAEPNSSTYNIIID 396
Query: 231 ACAAASDGEGIDKIVAMME----------------------------------ADRGVVL 256
E +I+ ME + RG
Sbjct: 397 MLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNP 456
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV 316
D Y + G K G D+A + K + HN Y +I + G K+D ++
Sbjct: 457 DCVTYCSLIDGLGKKGQVDEAYRLFEKM-LDAGHNANPVVYTSLIRNFFIHGRKEDGHKI 515
Query: 317 WKRY-----KQNLKVYN-------------------------------RGYICVISSLLK 340
+K K +L + N R Y +I L K
Sbjct: 516 FKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTK 575
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
IF + + D R N ++D +C+ G +HKA ++ + + + +P V T
Sbjct: 576 AGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVAT 635
Query: 401 WYLMATG 407
+ + G
Sbjct: 636 YGAIVDG 642
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 102/257 (39%), Gaps = 3/257 (1%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P VY +L+ + E I +++ RG N+ M+ ++ G +K +
Sbjct: 493 PVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFE 552
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
++ G D ++SIL+ A I M+ +G LD Y G+ K+
Sbjct: 553 DIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK-QQGFALDARAYNAVVDGFCKS 611
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRG 330
G KA +L + + + + Y ++ A D+ +++ K + +++
Sbjct: 612 GKVHKAYEILEEMKEKCVQPTVA-TYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVL 670
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I K ++ A I EE + L ++ N L+DA + +++A +
Sbjct: 671 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK 730
Query: 391 LRGTEPNVRTWYLMATG 407
PN T+ ++ G
Sbjct: 731 EMKCPPNTYTYSILING 747
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 60/314 (19%), Positives = 118/314 (37%), Gaps = 42/314 (13%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K +E+ F + LP V Y L++ A A + I M+ +G
Sbjct: 535 MDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGF 594
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
YN++++ + ++G K ++ EM+EK + T+ ++ A + +D+
Sbjct: 595 ALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKI---DRLDE 651
Query: 244 IVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKALAVLRK------------------ 283
+ E +G+ L+ +Y++ G+ K G D+A +L +
Sbjct: 652 AYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLD 711
Query: 284 --------SEVLMMHNKF--------SRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKV 326
+E L+ + Y +I + W+ KQ L
Sbjct: 712 ALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVP 771
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
Y +IS L K + A +FE +++ D N LI+ +A +
Sbjct: 772 NVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVF 831
Query: 387 YKAQLRGTEPNVRT 400
+ +LRG N+++
Sbjct: 832 EETRLRGCRINIKS 845
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 122/277 (44%), Gaps = 9/277 (3%)
Query: 111 KKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSA 168
K+ F L +D K + +A + EK P+V Y A+++ A
Sbjct: 590 KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRL 649
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
++A ++ ++ + +G+ + Y+S+++ + + G + ++ EM +KG+ + YT++ L
Sbjct: 650 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 709
Query: 229 LSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
L A A + E + +M E + Y+ +G + +KA + +
Sbjct: 710 LDALVKAEEINEALVCFQSMKEMK--CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQ 767
Query: 288 -MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGME 345
++ N + Y +I+ A GN D +++R+K N + + + +I + +
Sbjct: 768 GLVPNVVT--YTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAM 825
Query: 346 SAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
A ++FEE R +I+ L+DA + L +A
Sbjct: 826 EAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQA 862
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 125/302 (41%), Gaps = 49/302 (16%)
Query: 165 AKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYT 224
++A EI +M G+ + YN+++N ++ L E+ ++G D T
Sbjct: 59 GETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVT 118
Query: 225 FSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL--- 281
++ L+ + A D E ++ M + RG V + Y+ +G K G D+A ++
Sbjct: 119 YNTLIDSLCKAGDLEEARRLHGGMSS-RGCVPNVVTYSVLINGLCKVGRIDEARELIQEM 177
Query: 282 -RKS-EVL---MMHNKF------------------------------SRAYDFVITQYAA 306
RKS +VL + +N F + + +I
Sbjct: 178 TRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCK 237
Query: 307 CGNKDDVLR---VWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
CG D+ + Y N+ YN +++ L K D ME A + E + + D+
Sbjct: 238 CGQTDEACNDDMIAGGYVPNVVTYNA----LVNGLCKADKMERAHAMIESMVDKGVTPDV 293
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ L+DA+C+ + +A L++ RG PNV T+ + G ++++S EA +
Sbjct: 294 ITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG---EAFQI 350
Query: 424 AL 425
AL
Sbjct: 351 AL 352
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 38/260 (14%)
Query: 165 AKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYT 224
K + E M G V + YN+++N + ++ +++ M +KG+ D T
Sbjct: 236 CKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVIT 295
Query: 225 FSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
+S+L+ A C A+ E ++ + M A RG + + + G K+ S +A +
Sbjct: 296 YSVLVDAFCKASRVDEALELLHGM--ASRGCTPNVVTFNSIIDGLCKSDRSGEAFQI--- 350
Query: 284 SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDG 343
L+V+ R KV + +I+ K
Sbjct: 351 -----------------------------ALQVYNRMLVPDKVT---FNILIAGACKAGN 378
Query: 344 MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYL 403
E A +FEE ++N+ D+ LID C+ G + A ++ G PNV T+ +
Sbjct: 379 FEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNV 438
Query: 404 MATGYLQNNQSEKGVEAMKK 423
+ G ++ + E+ E +++
Sbjct: 439 LVHGLCKSGRIEEPCEFLEE 458
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 117/262 (44%), Gaps = 16/262 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y ++NA +SA +A ++ QM + +N+M+ + + G+ ++ L+ E
Sbjct: 188 IYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREA 247
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+G++ ++ +++ L+ C D +V MM RG D G V +G
Sbjct: 248 IRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMM--GRGHTPDMITLGALIHGLVVSG 305
Query: 273 LSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-----YKQNLKV 326
+ AL V K +E +M + + Y+ +I+ K +L K +Q ++
Sbjct: 306 QVNDALIVREKMAERQVMPD--ANIYNVLISGLC----KKRMLSAAKNLLEEMLEQKVQP 359
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
Y +I ++ D + A KIFE E + C DI N +I YC+ G++ +A T +
Sbjct: 360 DKFIYTTLIDGFVRSDKLSDARKIFEFMEEKA-CPDIVAYNVMIKGYCKFGMMKEAVTCM 418
Query: 387 YKAQLRGTEPNVRTWYLMATGY 408
+ G P+ T+ + GY
Sbjct: 419 SSMRKAGCIPDEFTYTTLVDGY 440
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 24/168 (14%)
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC----G 308
G V Y GY + G + L +L + E ++ + Y A G
Sbjct: 111 GCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEME--------TKGIIPTVVTYGAIIHWLG 162
Query: 309 NKDDVLRV--------WKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
K D+ +V + N+++YN VI++L K A + +
Sbjct: 163 RKGDLTKVESLLGEMRARGLSPNVQIYNT----VINALCKCRSASQASDMLNQMVKSRFN 218
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
D+ N +I +CR G + +A L+ +A RG EPN ++ + G+
Sbjct: 219 PDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGF 266
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 95/256 (37%), Gaps = 53/256 (20%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
AL++ + A I+ ++M +R ++ YN +++ + +L+ EM E+
Sbjct: 296 ALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQ 355
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
+ DK+ ++ L+ + KI ME D Y GY K G+ +
Sbjct: 356 KVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEK--ACPDIVAYNVMIKGYCKFGMMKE 413
Query: 277 A---LAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVYN 328
A ++ +RK+ + ++F+ Y ++ YA G+ LR+ +R K N+ Y
Sbjct: 414 AVTCMSSMRKAGCI--PDEFT--YTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYA 469
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
LI YC G + AE L K
Sbjct: 470 ---------------------------------------SLICGYCNIGDTYSAEDLFAK 490
Query: 389 AQLRGTEPNVRTWYLM 404
Q G PNV + ++
Sbjct: 491 MQSEGLFPNVVHYTVL 506
>gi|148906116|gb|ABR16216.1| unknown [Picea sitchensis]
Length = 394
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 129/283 (45%), Gaps = 28/283 (9%)
Query: 149 LKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
L++PSV LLN Y S A + M +N M+ Y + G ++
Sbjct: 43 LRIPSVETKLLNLYVKCGSLPDARLAFDNMTK----GDVFPWNVMIGGYVKHGETREALE 98
Query: 209 LMHEMEE-KGIDCDKYTFSILLSAC---AAASDGEGI-DKIVAMMEADRGVVLDWTVYAT 263
L H+M++ + D YT+S +L+AC A+ S+G+ I D+I++ +G +D V
Sbjct: 99 LYHQMQKVSSTNPDNYTYSSVLNACARLASLSEGKLIYDEIIS-----KGCEMDVIVENA 153
Query: 264 AASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN 323
+ ++K G + A V K M + ++ +++ YA G D+ LR++ Y+
Sbjct: 154 LINMFMKCGSIEDARRVFDK-----MCERNLVSWTAMVSGYAQGGFADEALRMF--YEMQ 206
Query: 324 LKVYNRGYICVISSL---LKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
+ Y+ V S L + ++ ++I R L I + N LID Y + G +
Sbjct: 207 GEDVKANYVTVASVLPACAQLSDLQQGKEIHGYIIRRGLDLGIVVGNALIDMYAKCGSIG 266
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
A+ + K R +V +W + GY QN + ++ +E +K
Sbjct: 267 SAQKVFDKMLQR----DVVSWNVAIAGYAQNGRFDECMELFRK 305
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLP-SVYIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
+D+ AK I A F+ + ++ + +V IA YA ++ + ++M+ GL
Sbjct: 256 IDMYAKCGSIGSAQKVFDKMLQRDVVSWNVAIA---GYAQNGRFDECMELFRKMQCAGLK 312
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
I +N+++ Y Q G + L +M+ +G+ + T + +LSACAA S
Sbjct: 313 IDVITWNTLITAYAQNGYGDQTLELFQQMQLRGVKPNSITIASVLSACAAVS 364
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 105/243 (43%), Gaps = 15/243 (6%)
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILLSACAAASDGEGIDKI--VA 246
+N+M+N Y + GN + + ++ + G+ D +T+ S++L C +G+D V
Sbjct: 197 FNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCR----NKGVDNAYEVF 252
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDFVITQ 303
++ +G + Y G +AG ++AL + M + R Y +I
Sbjct: 253 LIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFAD----MTEDNCCPTVRTYTVLIYA 308
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
+ G K + L ++ K+ N Y +I L K + M+ A K+ E + L
Sbjct: 309 LSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPS 368
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ N LID YC+ G++ A ++ + PN RT+ + G + + K + +
Sbjct: 369 VVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLN 428
Query: 423 KAL 425
K L
Sbjct: 429 KML 431
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 112/261 (42%), Gaps = 9/261 (3%)
Query: 166 KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF 225
+ KA ++ +M +R L I YNS+++ + + + L+ M E G+ D++T+
Sbjct: 418 RKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTY 477
Query: 226 SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
S+ + E + ++A +GV + +Y GY K G D A ++L +
Sbjct: 478 SVFIDTLCKEGRVEEAGTLFDSVKA-KGVKANEVIYTALIDGYCKVGKIDVAYSLLER-- 534
Query: 286 VLMMHNK-FSRAYDFVITQYAACGNK---DDVLRVWKRYKQNLKVYNRGYICVISSLLKF 341
M+++ +Y + + C K + V K +K Y +I +LK
Sbjct: 535 --MLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKD 592
Query: 342 DGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+ A K+F S D+ + AY +G+L + + +I K G P++ T+
Sbjct: 593 GAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTY 652
Query: 402 YLMATGYLQNNQSEKGVEAMK 422
++ GY + + + + +K
Sbjct: 653 TVLIDGYARLGLTHRAFDFLK 673
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 139/334 (41%), Gaps = 42/334 (12%)
Query: 133 QGIEQAASYFNCVPEK--LKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
+G++ A F +P+K + Y L++ A +A + M + Y
Sbjct: 243 KGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTY 302
Query: 191 NSMMNVYYQTGNYKKLDSL--MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMM 248
+ +Y +G+ +K+++L +EM+EKG + + +T+++L+ + + K+++ M
Sbjct: 303 TVL--IYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEM 360
Query: 249 EADRGVVLDWTVYATAASGYVKAGLSDKALAVL--------------------------- 281
+++G++ Y GY K G+ D A +L
Sbjct: 361 -SEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419
Query: 282 -RKSEVL---MMHNKFSRA---YDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYIC 333
K+ L M+ K S + Y+ +I + + R+ +N V ++ Y
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
I +L K +E A +F+ +++ + + I LID YC+ G + A +L+ +
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVL 427
PN T+ ++ G + + ++ + K L +
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTM 573
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 58/303 (19%), Positives = 121/303 (39%), Gaps = 23/303 (7%)
Query: 137 QAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
+A + FN + EK P+V Y L++ ++A ++ +M ++GL+ + YN+++
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRG 253
+ Y + G ++ ME + T++ L+ C + + + M+E R
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLE--RK 434
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNK 310
+ Y + G K + A +L LM N Y I G
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLS----LMNENGLVPDQWTYSVFIDTLCKEGRV 490
Query: 311 DDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH- 368
++ ++ K + +K Y +I K ++ A + E + +D +PN
Sbjct: 491 EEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLER-----MLNDACLPNSY 545
Query: 369 ----LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
LI+ C+ + +A +L+ K G +P V T+ ++ L++ + ++
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605
Query: 425 LVL 427
+ L
Sbjct: 606 VSL 608
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 30/298 (10%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLD-- 207
P+V + AL+++ +A+ + +M RG+ TI YNS++ Y N K+LD
Sbjct: 333 PNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLI---YGLCNDKRLDEA 389
Query: 208 -SLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAA 265
+M M KG D D +T++IL++ C A +G+ M + RG++ D Y+T
Sbjct: 390 NQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKM--SLRGMIADTVTYSTLI 447
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRA---YDFVITQYAACGNKDDVLRVWKRYKQ 322
G+ ++ + L V +K M+ Y ++ G ++ L + + +
Sbjct: 448 QGFCQS----RKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHK 503
Query: 323 -----NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
++ +YN +I + + ++ A +F S+ + DI+ N ++ C+R
Sbjct: 504 CKMELDIGIYN----IIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRS 559
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ---SEKGVEAMKKALVLLEAGT 432
L +A+ L K + G EP+ T+ + +L+ N S + +E MK+ +A T
Sbjct: 560 SLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDAST 617
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 99/249 (39%), Gaps = 19/249 (7%)
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEG 240
G T+ +N+++N G + L+ M D T + +++ C E
Sbjct: 155 GYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEA 214
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AY 297
+D I MM G + Y + K+G + AL +LRK E H K Y
Sbjct: 215 VDLIARMMA--NGCQPNQFTYGPILNRMCKSGNTASALDLLRKME----HRKIKPHVVTY 268
Query: 298 DFVITQYAACGNKDDVLRVW-----KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
+I G DD L + K K N+ YN +I S F + ++
Sbjct: 269 TIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNS----LIGSFCSFGRWDDGAQLLR 324
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
+ +R + ++ + LID+ + G L +A+ L + RG EPN T+ + G +
Sbjct: 325 DMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDK 384
Query: 413 QSEKGVEAM 421
+ ++ + M
Sbjct: 385 RLDEANQMM 393
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 65/329 (19%), Positives = 133/329 (40%), Gaps = 47/329 (14%)
Query: 122 VAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDR 181
V+ +DLIA++ C P + Y +LN + + A ++++M R
Sbjct: 211 VSEAVDLIARMMA-------NGCQPNQF----TYGPILNRMCKSGNTASALDLLRKMEHR 259
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL-SACAAASDGEG 240
+ + Y +++ + G S EME KGI + +T++ L+ S C+ +G
Sbjct: 260 KIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDG 319
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF------- 293
+ M+ R + + ++ VK G + +E ++N+
Sbjct: 320 AQLLRDMIT--RKITPNVVTFSALIDSLVKEG---------KLTEAKDLYNEMITRGIEP 368
Query: 294 -SRAYDFVITQYAACGNK--DDV-----LRVWKRYKQNLKVYNRGYICVISSLLKFDGME 345
+ Y+ +I Y C +K D+ L V K ++ YN +I+ K ++
Sbjct: 369 NTITYNSLI--YGLCNDKRLDEANQMMDLMVSKGCDPDIWTYN----ILINGFCKAKQVD 422
Query: 346 SAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
++F + R + D + LI +C+ L A+ + + +G P + T+ ++
Sbjct: 423 DGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILL 482
Query: 406 TGYLQNNQSEKG---VEAMKKALVLLEAG 431
G N + E+ ++ M K + L+ G
Sbjct: 483 DGLCDNGELEEALGILDQMHKCKMELDIG 511
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 143/314 (45%), Gaps = 25/314 (7%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
E+A + QQM+ G + YN++++V+ ++ ++ ++ EME G T++ L
Sbjct: 281 EEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSL 340
Query: 229 LSACAAAS-DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
+SA A E +D M+ +G+ D Y T SG+ KAG D A+ V + +
Sbjct: 341 ISAYAKGGLLEEALDLKTQMVH--KGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAV 398
Query: 288 MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKF---DG 343
++ +I + G ++++V+ ++K+ N I ++LL +G
Sbjct: 399 GCKPNIC-TFNALIKMHGNRGKFAEMMKVF----DDIKLCNCSPDIVTWNTLLAVFGQNG 453
Query: 344 MES-AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR-GTEPNVRTW 401
M+S IF+E + + N LI AY R G +A +YK+ L G P++ T+
Sbjct: 454 MDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQA-MAVYKSMLEAGVVPDLSTY 512
Query: 402 YLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFI 461
+ + E+ +K L +E G R KP++ ++ L Y ++IE + F
Sbjct: 513 NAVLAALARGGLWEQS----EKVLAEMEDG-RCKPNELSYSSLLHAYANGKEIERMNAF- 566
Query: 462 KLLTGKEIISADLQ 475
+EI S ++
Sbjct: 567 ----AEEIYSGSVE 576
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 124/286 (43%), Gaps = 13/286 (4%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEM 213
Y L+NAY+ + A + +M+ G I YN ++NVY + G + + +L+ M
Sbjct: 196 YTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAM 255
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+G+ D YT++ L+S C S E + M+ + G D Y + K+
Sbjct: 256 RSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLE-GFTPDKVTYNALLDVFGKSRR 314
Query: 274 SDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRV-WKRYKQNLKVYNR 329
+A+ VL++ E N FS Y+ +I+ YA G ++ L + + + +K
Sbjct: 315 PQEAMKVLQEMEA----NGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVF 370
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y ++S K + A ++F E + +I N LI + RG + +
Sbjct: 371 TYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDI 430
Query: 390 QLRGTEPNVRTWYLMATGYLQN---NQSEKGVEAMKKALVLLEAGT 432
+L P++ TW + + QN +Q + MK+A + E T
Sbjct: 431 KLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDT 476
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
A+L+ Y + KA I+ M + YNS+M +Y ++ N++K + ++ E+ EK
Sbjct: 619 AMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEK 678
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
G+ D+ +++ ++ A + +I + M+ D +V D Y T + Y + +
Sbjct: 679 GMKPDRISYNTVIYAYCRNGRMKEASRIFSEMK-DSALVPDVVTYNTFIATYAADSMFAE 737
Query: 277 ALAVLR 282
A+ V+R
Sbjct: 738 AIDVVR 743
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
L + + Q + +A N + E PS+ Y +L+ Y+ +++ +K+E I++++ ++G+
Sbjct: 621 LSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGM 680
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS-DGEGID 242
I YN+++ Y + G K+ + EM++ + D T++ ++ AA S E ID
Sbjct: 681 KPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAID 740
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVK 270
+ M++ +G D Y + Y K
Sbjct: 741 VVRYMIK--QGCKPDQNTYNSIVDWYCK 766
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 135/323 (41%), Gaps = 21/323 (6%)
Query: 111 KKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLP--SVYIALLNAYACAKSA 168
K++ FV + ++ +QA + + + E +P S Y A+L A A
Sbjct: 466 KRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLW 525
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
E++E ++ +M D + Y+S+++ Y +++++ E+ ++ T ++L
Sbjct: 526 EQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVE----THAVL 581
Query: 229 LSACAAASDGEG--IDKIVAMMEA-DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
L + I+ A +E RG+ D T S Y + + KA +L
Sbjct: 582 LKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILN--- 638
Query: 286 VLMMHNKFSRA---YDFVITQYAACGN---KDDVLRVWKRYKQNLKVYNRGYICVISSLL 339
M +F+ + Y+ ++ Y+ N +++LR + ++ +K Y VI +
Sbjct: 639 -FMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILR--EVLEKGMKPDRISYNTVIYAYC 695
Query: 340 KFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVR 399
+ M+ A +IF E + L D+ N I Y + +A ++ +G +P+
Sbjct: 696 RNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQN 755
Query: 400 TWYLMATGYLQNNQSEKGVEAMK 422
T+ + Y + +Q + +K
Sbjct: 756 TYNSIVDWYCKLDQRHEANSFVK 778
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 122/290 (42%), Gaps = 17/290 (5%)
Query: 133 QGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
Q E + + V KL V A+L C +A MQ +R + + Y++
Sbjct: 95 QAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAA--MQMLRKTWVNADVVMYST 152
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+++ + L EM KGI + YTFSIL+ A G+ ++AMM +
Sbjct: 153 IIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMM-MKK 211
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK-- 310
GV + Y GY +KAL + V++ + + I C K
Sbjct: 212 GVKPNVVTYGAIMDGYCLVNQVNKALNIFN---VMVQEGVEPNVWCYNIIINGLCKKKRV 268
Query: 311 DDVLRV-----WKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
D+ + + WK+ ++ YN +I L K + ++ ++ +E S DI
Sbjct: 269 DEAMNLFKEMHWKKINPDVVTYN----ILIDGLCKLGKISTSLELVDEMRSIGKTVDIIT 324
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
N L+ A C+ L +A TL+ + + +G +PNV T+ + G ++ + E
Sbjct: 325 YNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLE 374
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 129/322 (40%), Gaps = 61/322 (18%)
Query: 146 PEKLKLPSVYIAL--LNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
P L+ + +L +N Y A S + +Q+ G+ + +MN Y TG
Sbjct: 8 PPILQFNHILASLVKINHYPTAIS------LFRQLEFNGIKPSIVTLTILMNCYCHTGGI 61
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI---DKIVAMMEADRGVVLDWT 259
L S++ ++ + G + + TF+ L+ C E + D +VA G LD
Sbjct: 62 TFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVA-----HGFKLDQV 116
Query: 260 VYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR 319
YA +G K G + A+ +LRK+ V N D V+
Sbjct: 117 SYAILMNGLCKMGETRAAMQMLRKTWV----------------------NADVVM----- 149
Query: 320 YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
Y +I SL K + A +++ E ++ + ++ + L+DA C+
Sbjct: 150 -----------YSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKG 198
Query: 380 HKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKE 439
+A L+ +G +PNV T+ + GY NQ K + V+++ G +P+
Sbjct: 199 KQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFN---VMVQEGV--EPNVW 253
Query: 440 CLAACL-GYYKKERDIEGADYF 460
C + G KK+R E + F
Sbjct: 254 CYNIIINGLCKKKRVDEAMNLF 275
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 139/367 (37%), Gaps = 45/367 (12%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P + +++ E A +++M R + +++ + G + L
Sbjct: 488 PGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWF 547
Query: 212 EMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
+ EKG + T + L+ C + E + + M+E RG VLD Y T SG K
Sbjct: 548 RLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLE--RGFVLDKITYNTLISGCCK 605
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-R 329
G ++ LR V + Y+ +I G D+ + +W K V N
Sbjct: 606 EGKVEEGFK-LRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVY 664
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG------------ 377
Y +I K D +E EK+F E ++NL + + N LI AYCR G
Sbjct: 665 TYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM 724
Query: 378 --------------LLH---------KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
L+H A+ LI + + G PNV + + GY + Q
Sbjct: 725 RSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQM 784
Query: 415 EKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADL 474
+K V +++ + P+K + Y K D++ A + + GK I+ +
Sbjct: 785 DKVVNVLQEM-----SSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTV 839
Query: 475 QDRLLNN 481
+L N
Sbjct: 840 TYNVLTN 846
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 131/325 (40%), Gaps = 33/325 (10%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N + +A ++++ ++G + YN++++ Y + GN + +M
Sbjct: 386 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMV 445
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
KGI+ + T + ++ E + I+ M RG ++ + T
Sbjct: 446 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM-LSRGFSINPGAFTTIIHWLCMNSRF 504
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAA--C--GNKDDVLRVWKR-----YKQNLK 325
+ AL LR+ +++ N R D ++T C G D + +W R + NL
Sbjct: 505 ESALRFLRE---MLLRNM--RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLV 559
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
N +I L K M+ A ++ ++ R D N LI C+ G + + L
Sbjct: 560 TTN----ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKL 615
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV----EAMKKALVLLEAGTRWKPSKECL 441
+ +G EP+ T+ L+ G + + ++ V E + LV P+
Sbjct: 616 RGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLV---------PNVYTY 666
Query: 442 AACL-GYYKKERDIEGADYFIKLLT 465
+ GY K ++ EG F +LLT
Sbjct: 667 GVMIDGYCKADKIEEGEKLFTELLT 691
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 106/260 (40%), Gaps = 40/260 (15%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ ++ +++A + +N + +P+VY +++ Y A E+ E + ++ + L
Sbjct: 638 MCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELN 697
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
++ YN+++ Y + GN + L +M KGI T+S L+ E ++
Sbjct: 698 SVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLID 757
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH-NKFSRAYDFVITQYA 305
M + G++ + Y GY K G DK + VL++ +H NK + Y +I Y+
Sbjct: 758 EMRKE-GLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKIT--YTVMIDGYS 814
Query: 306 ACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
G+ M++A K+ E + + D
Sbjct: 815 KSGD----------------------------------MKTAAKLLHEMVGKGIVPDTVT 840
Query: 366 PNHLIDAYCRRGLLHKAETL 385
N L + +C+ G + + + L
Sbjct: 841 YNVLTNGFCKEGKIEEGKLL 860
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 127/301 (42%), Gaps = 11/301 (3%)
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRD 180
++ ++ + K++ +A S EK P+ VY L++ Y + A I M
Sbjct: 387 SVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVS 446
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
+G+ ++ NS++ + + G ++ + ++ EM +G + F+ ++ S E
Sbjct: 447 KGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFES 506
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AY 297
+ + M R + + + T G K G A+ + + ++ F
Sbjct: 507 ALRFLREMLL-RNMRPNDGLLTTLVGGLCKEGKHSDAVELWFR----LLEKGFGANLVTT 561
Query: 298 DFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWES 356
+ +I GN + +R+ K+ + V ++ Y +IS K +E K+ E
Sbjct: 562 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 621
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ + D N LI CR G L +A L + + R PNV T+ +M GY + ++ E+
Sbjct: 622 QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 681
Query: 417 G 417
G
Sbjct: 682 G 682
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 131/338 (38%), Gaps = 23/338 (6%)
Query: 99 FSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI-- 156
F +A+ + ++ K F T L + K +E++ F + + + P VY+
Sbjct: 260 FRNAIGVFRFLANKGVFP-TVKTCTFLLSSLVKANELEKSYWVFETMRQGVS-PDVYLFS 317
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
+NA+ E A + M G+ + YN++++ + GN + +M +
Sbjct: 318 TAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKD 377
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--------DRGVVLDWTVYATAASGY 268
G++ T+S+L++ G+ K+ EA ++G + VY T GY
Sbjct: 378 GVNATLITYSVLIN---------GLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGY 428
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVY 327
K G AL + R V N S + +I + G + + + + +
Sbjct: 429 CKMGNLGDALRI-RGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSIN 487
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
+ +I L ESA + E RN+ + + L+ C+ G A L +
Sbjct: 488 PGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWF 547
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
+ +G N+ T + G + ++ V +KK L
Sbjct: 548 RLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKML 585
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 106/247 (42%), Gaps = 11/247 (4%)
Query: 175 MQQMRDRGLVKKTIDYNSMMNVY---YQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
+ ++ + G+ +D +++VY ++ ++ + + KG+ T + LLS+
Sbjct: 231 LNEVGESGVAVAAVDL--LIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSS 288
Query: 232 CAAASDGEGIDKIVAMMEADR-GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH 290
A++ ++K + E R GV D +++TA + + K G + A+ + E L +
Sbjct: 289 LVKANE---LEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVS 345
Query: 291 NKFSRAYDFVITQYAACGNKDDVLRV-WKRYKQNLKVYNRGYICVISSLLKFDGMESAEK 349
Y+ +I GN D+ R K K + Y +I+ L+K + A
Sbjct: 346 PNVV-TYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANS 404
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
+ +E + + + N LID YC+ G L A + +G PN T + G+
Sbjct: 405 VLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFC 464
Query: 410 QNNQSEK 416
+ Q E+
Sbjct: 465 KIGQMEQ 471
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 145/377 (38%), Gaps = 92/377 (24%)
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRG 182
AIRL ++ +EQ NC P+ + +Y +++++ + +A + QM +G
Sbjct: 189 AIRL-----LRSMEQG----NCQPDVV----IYTSIIDSLCKDRQVTEAFNLFSQMVGQG 235
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ Y S+++ +K + +L+++M I D FS ++ A
Sbjct: 236 ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAH 295
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDF 299
+IV MM RGV D Y T G+ D+A+ V +M+ F+ +Y
Sbjct: 296 EIVDMM-IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFD----MMVRKGFAPDVISYTT 350
Query: 300 VITQYAACGNKDDVLRVW-----KRYKQNLKVYN------------------------RG 330
+I Y D + ++ K + + K YN RG
Sbjct: 351 LINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARG 410
Query: 331 -------YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
Y ++ SL K +E A + + E+ NL DI++ N +ID CR G L A
Sbjct: 411 QMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAAR 470
Query: 384 TLIYKAQLRGTEPNVRTWYLM-----------------------------------ATGY 408
L +G P+V T+ +M A G+
Sbjct: 471 DLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGF 530
Query: 409 LQNNQSEKGVEAMKKAL 425
LQNN++ + ++ +++ L
Sbjct: 531 LQNNETLRAIQLLEEML 547
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 86/425 (20%), Positives = 146/425 (34%), Gaps = 123/425 (28%)
Query: 97 KRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKL----- 151
K +S L +S T+ +F + P + + LI + + F+ + + LKL
Sbjct: 79 KHYSTVLSLS---TQMDSFGVPPNVYTLNI-LINSFCHLNRVGFAFSVLAKILKLGHQPD 134
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P+ + L+ +A + +M D G + Y +++N + GN L+
Sbjct: 135 PTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLR 194
Query: 212 EMEE-----------------------------------KGIDCDKYTFSILLSAC---- 232
ME+ +GI D +T++ L+ A
Sbjct: 195 SMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLC 254
Query: 233 -----------------------------AAASDGEGID--KIVAMMEADRGVVLDWTVY 261
A +G+ + +IV MM RGV D Y
Sbjct: 255 EWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMM-IQRGVEPDVVTY 313
Query: 262 ATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVW- 317
T G+ D+A+ V +M+ F+ +Y +I Y D + ++
Sbjct: 314 TTLMDGHCLQSEMDEAVKVFD----MMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFE 369
Query: 318 ----KRYKQNLKVYN------------------------RG-------YICVISSLLKFD 342
K + + K YN RG Y ++ SL K
Sbjct: 370 EMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNR 429
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
+E A + + E+ NL DI++ N +ID CR G L A L +G P+V T+
Sbjct: 430 HLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYN 489
Query: 403 LMATG 407
+M G
Sbjct: 490 IMIHG 494
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 134/327 (40%), Gaps = 29/327 (8%)
Query: 101 HALQISMWMTKKSNFVL---TPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIA 157
HAL + W T + + TPA +++ + A QG+ +N
Sbjct: 165 HALDVIGWNTLIAGYCRVGDTPAALSVADRMTA--QGLPMDVVGYN-------------T 209
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
L+ + A + A ++ M++ G+ Y + Y +T ++ L M G
Sbjct: 210 LVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNG 269
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR-GVVLDWTVYATAASGYVKAGLSDK 276
+ D T S L++ DG + E D+ G V + Y T KAG +
Sbjct: 270 VLLDVVTLSALVAGLC--RDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKE 327
Query: 277 ALAVLRK---SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK-RYKQNLKVYNRGYI 332
L++L + V+M ++ D++ Q G D+V + NL + Y
Sbjct: 328 LLSLLGEMVSRGVVMDLVTYTALMDWLGKQ----GKTDEVKDTLRFALSDNLSLNGVTYT 383
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I +L K ++ AE++ E E +++ ++ + +I+ + +RGLL KA + R
Sbjct: 384 VLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKER 443
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVE 419
G PNV T+ + G+ + + +E
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALE 470
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/390 (20%), Positives = 157/390 (40%), Gaps = 59/390 (15%)
Query: 48 SSMYKLYRMLSPMGD-PND-SMVPLLDQWVEEGRPLDMEQL------RIIIKKFRLYKRF 99
S Y L+R + +G PN + L+D + GR ++ L R ++ Y
Sbjct: 291 SEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350
Query: 100 ---------SHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLK 150
+ ++ ++ N L + +D + K +++A + EK
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410
Query: 151 LPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
P+V + +++N + +KA + M++RG+ + Y ++++ +++
Sbjct: 411 SPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALE 470
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAAS 266
+ H+M +G++ +K+ L++ +G+ I++ +A+ + + G+ LD Y T
Sbjct: 471 VYHDMLCEGVEVNKFIVDSLVNGLR--QNGK-IEEAMALFKDASGSGLSLDHVNYTTLID 527
Query: 267 GYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKV 326
G KAG A + + LM N A V
Sbjct: 528 GLFKAGDMPTAF---KFGQELMDRNMLPDAV----------------------------V 556
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
YN +I + L KF + A+ I E + L D N +I ++CR+G KA L+
Sbjct: 557 YNV-FINCLCILGKF---KEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLL 612
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
++ ++ +PN+ T+ + G EK
Sbjct: 613 HEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 131/336 (38%), Gaps = 63/336 (18%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y ++ ++ KA ++ +M+ + I YN+++ + TG +K L++E
Sbjct: 590 STYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNE 649
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVK 270
M G T +L AC S +D I+ + E + G+ D TVY T
Sbjct: 650 MVSAGFSPSSLTHRRVLQAC---SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
G++ KA VL + M+ + + ++ +I + + D+ + Y Q L
Sbjct: 707 HGMTRKATVVLEE----MLGSGIAPDTITFNALILGHCKSSHLDN---AFATYAQMLHQN 759
Query: 328 NRGYICVISSLLKFDGMESAEKIFEE-----------WESRNLCHDIRIPNH-------- 368
I ++LL G+ES +I E E NL +DI + H
Sbjct: 760 ISPNIATFNTLL--GGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVE 817
Query: 369 ----------------------LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
LI + + G++ +A+ L Q RG P T+ ++ +
Sbjct: 818 AMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVS 877
Query: 407 GYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLA 442
G+ ++ G E K + E G + PSK L+
Sbjct: 878 GW---SRIRNGTEVKKCLKDMKEKG--FSPSKGTLS 908
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 123/279 (44%), Gaps = 43/279 (15%)
Query: 163 ACAKSAEKAEIIMQ---QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGID 219
AC K + + +++ +M G+ I +NS++ V + G ++ SL EM +GID
Sbjct: 156 ACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGID 215
Query: 220 CDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALA 279
D +T++ LL A + +I++ M A + ++ + Y+T GY KAG D A
Sbjct: 216 QDIFTYNTLLDAVCKGGQLDMAFEIMSEMPA-KNILPNVVTYSTMIDGYAKAGRLDDARN 274
Query: 280 VLRKSEVLMMHNKFSR-AYDFVITQYAACGNKDDVLRV---------------------- 316
+ + + L + R +Y+ +++ YA G ++ + V
Sbjct: 275 LFNEMKFLGI--SLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGG 332
Query: 317 -WKRYKQNL--KVYNR-----------GYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
K+YK ++ KV+ Y +I K A +F E++ L D
Sbjct: 333 YGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKAD 392
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+ + + LIDA C+ GL+ A +L+ + G PNV T+
Sbjct: 393 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 431
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 38/252 (15%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
LD + K ++ A + +P K LP+V Y +++ YA A + A + +M+ G+
Sbjct: 225 LDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGI 284
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ YN+++++Y + G +++ + EME GI D T++ LL + + K
Sbjct: 285 SLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRK 344
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ 303
+ M+A R V + Y+T Y K GL +A+ V R +
Sbjct: 345 VFEEMKA-RHVSPNLLTYSTLIDVYSKGGLYREAMDVFR--------------------E 383
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
+ G K DV+ Y +I +L K +ESA + +E + ++
Sbjct: 384 FKKAGLKADVVL---------------YSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 428
Query: 364 RIPNHLIDAYCR 375
N +IDA+ R
Sbjct: 429 VTYNSIIDAFGR 440
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 119/281 (42%), Gaps = 8/281 (2%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGL 183
+ + ++ +E A + F + +VY A+++AY + +A I M+D GL
Sbjct: 84 ISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGL 143
Query: 184 VKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ YN++++ + G +K++ + EM G+ D+ TF+ LL+ C+ E
Sbjct: 144 KPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAAR 203
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL-MMHNKFSRAYDFVI 301
+ M +RG+ D Y T K G D A ++ + ++ N + Y +I
Sbjct: 204 SLSCEM-VNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVT--YSTMI 260
Query: 302 TQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
YA G DD ++ K + + Y ++S K E A + E E+ +
Sbjct: 261 DGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIR 320
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
D+ N L+ Y ++ + + + R PN+ T+
Sbjct: 321 KDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTY 361
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 17/263 (6%)
Query: 151 LPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
LP V Y +LLN Y A + ++A ++ +R GL + YN +++ Y + G+ ++
Sbjct: 1257 LPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARI 1316
Query: 209 LMHEMEEKGIDCDKYTFSIL----LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
L EM E+G + T++IL L+ + A E D++++ +G+ D Y T
Sbjct: 1317 LKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLS-----KGLQPDCFAYNTR 1371
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC--GNKDDVLRVWKRYKQ 322
+ G +A + EVLM+ S + I + C GN D + +
Sbjct: 1372 ICAELILGDIARAFEL---REVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVS 1428
Query: 323 N-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
N L+ Y C+I + + + A KIF S L +I AYCRRG L+
Sbjct: 1429 NGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYS 1488
Query: 382 AETLIYKAQLRGTEPNVRTWYLM 404
A K G EPN T+ ++
Sbjct: 1489 AYGWFRKMLEEGVEPNEITYNVL 1511
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 16/242 (6%)
Query: 175 MQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAA 234
++M G+ D N ++ V + + ++ EM E GI+ T++ LL +
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131
Query: 235 ASDGEGIDKIVAMMEA-DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF 293
+ + ++ ME G + + Y +G + G ++A ++ + + F
Sbjct: 1132 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSF 1191
Query: 294 SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-------YICVISSLLKFDGMES 346
+ Y+ +IT A G V K Y L++ N G Y +I LL+ +E+
Sbjct: 1192 T--YNPLITGLLARGC------VKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEA 1243
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
A+ F E + L D+ N L++ YC+ G L +A L + G P V T+ ++
Sbjct: 1244 AQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILID 1303
Query: 407 GY 408
GY
Sbjct: 1304 GY 1305
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 60/136 (44%), Gaps = 3/136 (2%)
Query: 135 IEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+ +A FN + LPS + +++AY + A ++M + G+ I YN
Sbjct: 1451 LREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNV 1510
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+++ + G + HEM E+G+ +KYT+++L+ + E + M +
Sbjct: 1511 LIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQN- 1569
Query: 253 GVVLDWTVYATAASGY 268
G+ D+ + G+
Sbjct: 1570 GIHPDYLTHKALLKGF 1585
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 108/290 (37%), Gaps = 9/290 (3%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I +D ++ +E+A + E+ LP+V Y L+ +S A +M +
Sbjct: 1300 ILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSK 1359
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
GL YN+ + G+ + L + +GI D T++IL+ + +
Sbjct: 1360 GLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDA 1419
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVI 301
K + M G+ D Y + + GL +A + ++ A F +
Sbjct: 1420 -KELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNN---MISDGLLPSAVTFTV 1475
Query: 302 TQYAAC--GNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
+A C GN +++ ++ ++ Y +I +L + + A F E R
Sbjct: 1476 IIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERG 1535
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
L + LID C+ G A ++ G P+ T + G+
Sbjct: 1536 LVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 137/341 (40%), Gaps = 40/341 (11%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
++ AY AE+ +MR+ GL + S++ + +TGN+ + +S+ EM + G
Sbjct: 113 MIAAYGKLGQPGIAELSFTEMREVGLEPNVACFTSLLEAHARTGNFVRAESIYQEMLKTG 172
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
+ T+ + ++A A ++I ++ D +Y Y KAG +
Sbjct: 173 PAPTEVTYQVYINALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQ 232
Query: 278 LAVLRK-------------------------SEVLMMHNKFSR------AYDFVITQYAA 306
A+ R+ +E + H + ++ Y +I Y+
Sbjct: 233 QALFRQMKGAGVPMTVVTFNSLMAFQKTVADAEACLRHMQAAKIKPDVITYTGLINAYSK 292
Query: 307 CGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
++ V++ L+ Y ++ + K +E AE +F+ DIR
Sbjct: 293 ARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRS 352
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
L+ AY G + KAE L+ + + G EPNV T+ + GY S + AM +
Sbjct: 353 YTTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYT----SVHDINAMLQTF 408
Query: 426 V-LLEAGTRWKPSKECLAACLGYYKKERDIEGA-DYFIKLL 464
L +AG KP+ + + ++ D E A +F K+L
Sbjct: 409 EDLQKAGI--KPNSTIFTLLVRTFGQQEDFESALSWFKKML 447
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+NAY+ A+ E+A ++ ++M GL I YN++++ Y + + +SL M
Sbjct: 282 TYTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSM 341
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+ D +++ LL+A A + + ++++ M+ G+ + Y T GY
Sbjct: 342 GQDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMK-QAGLEPNVVTYGTLMQGYT 396
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 105/243 (43%), Gaps = 15/243 (6%)
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILLSACAAASDGEGIDKI--VA 246
+N+M+N Y + GN + + ++ + G+ D +T+ S++L C +G+D V
Sbjct: 197 FNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCR----NKGVDNAYEVF 252
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDFVITQ 303
++ +G + Y G +AG ++AL + M + R Y +I
Sbjct: 253 LIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFAD----MTEDNCCPTVRTYTVLIYA 308
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
+ G K + L ++ K+ N Y +I L K + M+ A K+ E + L
Sbjct: 309 LSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPS 368
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ N LID YC+ G++ A ++ + PN RT+ + G + + K + +
Sbjct: 369 VVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLN 428
Query: 423 KAL 425
K L
Sbjct: 429 KML 431
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 112/261 (42%), Gaps = 9/261 (3%)
Query: 166 KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF 225
+ KA ++ +M +R L I YNS+++ + + + L+ M E G+ D++T+
Sbjct: 418 RKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTY 477
Query: 226 SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
S+ + E + ++A +GV + +Y GY K G D A ++L +
Sbjct: 478 SVFIDTLCKEGRVEEAGTLFDSVKA-KGVKANEVIYTALIDGYCKVGKIDVAYSLLER-- 534
Query: 286 VLMMHNK-FSRAYDFVITQYAACGNK---DDVLRVWKRYKQNLKVYNRGYICVISSLLKF 341
M+++ +Y + + C K + V K +K Y +I +LK
Sbjct: 535 --MLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKD 592
Query: 342 DGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+ A K+F S D+ + AY +G+L + + +I K G P++ T+
Sbjct: 593 GAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTY 652
Query: 402 YLMATGYLQNNQSEKGVEAMK 422
++ GY + + + + +K
Sbjct: 653 TVLIDGYARLGLTHRAFDFLK 673
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 139/334 (41%), Gaps = 42/334 (12%)
Query: 133 QGIEQAASYFNCVPEK--LKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
+G++ A F +P+K + Y L++ A +A + M + Y
Sbjct: 243 KGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTY 302
Query: 191 NSMMNVYYQTGNYKKLDSL--MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMM 248
+ +Y +G+ +K+++L +EM+EKG + + +T+++L+ + + K+++ M
Sbjct: 303 TVL--IYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEM 360
Query: 249 EADRGVVLDWTVYATAASGYVKAGLSDKALAVL--------------------------- 281
+++G++ Y GY K G+ D A +L
Sbjct: 361 -SEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419
Query: 282 -RKSEVL---MMHNKFSRA---YDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYIC 333
K+ L M+ K S + Y+ +I + + R+ +N V ++ Y
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
I +L K +E A +F+ +++ + + I LID YC+ G + A +L+ +
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVL 427
PN T+ ++ G + + ++ + K L +
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTM 573
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 107/274 (39%), Gaps = 25/274 (9%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y A L+AY E+ + ++ +M + G++ + Y +++ Y + G + + M
Sbjct: 617 YTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMV 676
Query: 215 EKGIDCDKYTFSILLSACAAASDGE------GIDKIVAMME-----------ADRGVVLD 257
+ G Y SIL+ + + + GID + +E + G +D
Sbjct: 677 DTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTID 736
Query: 258 WTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC---GNKDDVL 314
++Y +G+ + ++A ++ M S + D + C G + +
Sbjct: 737 VSIYGALIAGFCQQERLEEAQGLVHH----MKERGMSPSEDIYNSLLDCCCKLGVYAEAV 792
Query: 315 RVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAY 373
R+ +N L Y ++ L E A+ +F S +D LID
Sbjct: 793 RLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGL 852
Query: 374 CRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+R L+ + LI + +G +PN T+ L+ G
Sbjct: 853 LKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEG 886
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 58/303 (19%), Positives = 121/303 (39%), Gaps = 23/303 (7%)
Query: 137 QAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
+A + FN + EK P+V Y L++ ++A ++ +M ++GL+ + YN+++
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRG 253
+ Y + G ++ ME + T++ L+ C + + + M+E R
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLE--RK 434
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNK 310
+ Y + G K + A +L LM N Y I G
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLS----LMNENGLVPDQWTYSVFIDTLCKEGRV 490
Query: 311 DDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH- 368
++ ++ K + +K Y +I K ++ A + E + +D +PN
Sbjct: 491 EEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLER-----MLNDACLPNSY 545
Query: 369 ----LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
LI+ C+ + +A +L+ K G +P V T+ ++ L++ + ++
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605
Query: 425 LVL 427
+ L
Sbjct: 606 VSL 608
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 11/297 (3%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K I++A F P+ Y L++A A + + AE ++ +M ++ +
Sbjct: 356 MDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSI 415
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ ++S++N + G K M EM+E+GID + T+ ++ E
Sbjct: 416 SPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALD 475
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE---VLMMHNKFSRAYDFV 300
+ M + GV ++ + + +G K G +KA A+ R+ VL+ H ++ D +
Sbjct: 476 VYHEMLCE-GVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGL 534
Query: 301 ITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
GN +V + ++NL Y I+ L + AE EE +S L
Sbjct: 535 FKT----GNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGL 590
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
D N +I A R G KA L+ + +PN+ T+ + G + EK
Sbjct: 591 KPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEK 647
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 153/378 (40%), Gaps = 25/378 (6%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA- 123
D L ++ V +G D+ L ++ RFS A + M K P V
Sbjct: 261 DDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIG---AAPNHVTY 317
Query: 124 -IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRD 180
+ +D +AK Q ++ S V + + + Y AL++ ++A+ + +
Sbjct: 318 CMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALS 377
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS-DGE 239
+ Y +++ + GN + ++ EMEEK I + TFS +++ G+
Sbjct: 378 DNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGK 437
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL---MMHNKFSRA 296
D + M E RG+ + Y T G K + AL V E+L + NKF
Sbjct: 438 ATDYMREMKE--RGIDPNVVTYGTVIDGSFKCLGQEAALDVYH--EMLCEGVEVNKF--I 491
Query: 297 YDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWE 355
D ++ G + +++ + + + Y +I L K + +A K+ +E
Sbjct: 492 VDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELT 551
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
+NL D + N I+ C G +AE+ + + Q G +P+ T+ M QS
Sbjct: 552 EKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAA-----QSR 606
Query: 416 KGVEAMKKALVLLEAGTR 433
+G A KAL LL R
Sbjct: 607 EGKTA--KALKLLNGMKR 622
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 132/331 (39%), Gaps = 61/331 (18%)
Query: 160 NAYACAKSAE----KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEE 215
N A+S E KA ++ M+ + I Y++++ ++ G +K L++EM
Sbjct: 598 NTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSS 657
Query: 216 KGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGL 273
G T +L AC S G D I+ + E + G+ D TVY T G+
Sbjct: 658 SGFSPTSLTHRRVLQAC---SQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGM 714
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
+ KA+ VL + + + ++ +I + G+ D+ + Y Q L +
Sbjct: 715 TRKAMVVLEEMSGRGIAPD-TITFNALILGHFKSGHLDN---AFSTYDQMLYHGISPNVA 770
Query: 334 VISSLLKFDGMESAEKIFEE-----------WESRNLCHDIRIP---------------- 366
++LL G+ESA +I E E NL +DI +
Sbjct: 771 TFNTLL--GGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYC 828
Query: 367 --------------NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
N LI + + G++ +A+ L + Q RG P T+ ++ +G+ +
Sbjct: 829 EMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGW---S 885
Query: 413 QSEKGVEAMKKALVLLEAGTRWKPSKECLAA 443
+ G E K + E G + PSK L++
Sbjct: 886 KLRNGTEVRKFLKDMKEKG--FSPSKGTLSS 914
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 119/285 (41%), Gaps = 37/285 (12%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
+L++ Y E A + ++M+ +G+ + YNS++ + G ++ M+
Sbjct: 179 SLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRD 238
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLS 274
G++ + T+++ + + +D ++ E +GV+ D + G K G
Sbjct: 239 GVEPNVVTYTMFIVEYCRRN---AVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRF 295
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL----KVYNRG 330
+A A+ R+ E K A + V D L +R ++L +V +RG
Sbjct: 296 SEAYALFREME------KIGAAPNHVTYCMLI-----DTLAKAQRGNESLSLLGEVVSRG 344
Query: 331 -------YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH-----LIDAYCRRGL 378
Y ++ L K ++ A+ +F R+ D PN LIDA C+ G
Sbjct: 345 VVMDLIMYTALMDWLCKEGKIDEAKDMF-----RHALSDNHTPNGVTYTVLIDALCKAGN 399
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ AE ++ + + + PNV T+ + G ++ K + M++
Sbjct: 400 VDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMRE 444
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 85/212 (40%), Gaps = 46/212 (21%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+VY L+ KA +++++M RG+ TI +N+++ ++++G+ S +
Sbjct: 700 TVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQ 759
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M GI + TF+ LL +A + G
Sbjct: 760 MLYHGISPNVATFNTLLGGLESAG---------------------------------RIG 786
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVY 327
SD L ++K + + YD ++T Y NK + +R++ K + + Y
Sbjct: 787 ESDMVLNEMKKRGI----EPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTY 842
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
N +IS K M A+++F E ++R +
Sbjct: 843 N----ALISDFSKVGMMSQAKELFNEMQNRGV 870
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 133/312 (42%), Gaps = 23/312 (7%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K Q ++ S+F + K P V + LLNA + A ++++M + G+
Sbjct: 150 LVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPT 209
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL-SACAAASDGEGIDKIV 245
+ YN+++N Y + G YK L+ M KGI D T+++ + + C + +G +
Sbjct: 210 AVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKG---YL 266
Query: 246 AMMEADRGVVL-DWTVYATAASGYVKAGLSDKALAVLRKSEVL-MMHNKFSRAYDFVITQ 303
+ R +V + Y T SG+V+ G + A V + + ++ N S Y+ +I
Sbjct: 267 LLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPN--SITYNTLIAG 324
Query: 304 YAACGNKDDVLRVWK-RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
+ GN + LR+ L+ Y +++ L K I E
Sbjct: 325 HCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGG---- 380
Query: 363 IRIPN----HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ----NNQS 414
+R+ + +ID C+ G+L +A L+ P+V T+ ++ G+ + NN
Sbjct: 381 VRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAK 440
Query: 415 EKGVEAMKKALV 426
E + K LV
Sbjct: 441 EIMCKMYKTGLV 452
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 117/282 (41%), Gaps = 31/282 (10%)
Query: 137 QAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNV 196
A +F C +V +A Y E+AE M M GL ++ ++ ++N
Sbjct: 486 HVADHFTC--------NVLVATFCRYG---KLEEAEYFMNHMSRMGLDPNSVTFDCIING 534
Query: 197 YYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI---DKIVAMMEADR 252
Y +G+ K S+ +M G +T+ LL C E + ++ + A
Sbjct: 535 YGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVD 594
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA--CGNK 310
V+ + + +T SG LSD A+A++ + M+ N F +F T A C
Sbjct: 595 NVIFNTKLTSTCRSG----NLSD-AIALINE----MVTNDFLPD-NFTYTNLIAGLCKKG 644
Query: 311 DDV---LRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
V L K ++ L N Y ++ LLK +A IFEE ++++ D
Sbjct: 645 KIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAF 704
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
N +ID Y R+G K ++ + + N+ T+ ++ GY
Sbjct: 705 NVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGY 746
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 8/267 (2%)
Query: 97 KRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV-- 154
K F A++I W+T + + V+ + + + +++A + + + +P+V
Sbjct: 785 KSFDVAIKILRWITLEGH-VIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDT 843
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y AL N KA ++Q + + G V Y +++N + GN K L EM+
Sbjct: 844 YNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMK 903
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
GI S ++ A + E ++ +M + ++ + T Y K
Sbjct: 904 TLGISSHNVAMSAIVRGLANSKKIENAIWVLDLM-LEMQIIPTVATFTTLMHVYCKEANV 962
Query: 275 DKALAVLRKSEVLMMHNKFS-RAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYI 332
KAL + +S + H K AY+ +I+ A G+ + ++++ KQ +L YI
Sbjct: 963 AKALEL--RSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYI 1020
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNL 359
+I S + +EK+ + + R L
Sbjct: 1021 VLIDSFCAGNYQIESEKLLRDIQDREL 1047
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 136/302 (45%), Gaps = 19/302 (6%)
Query: 135 IEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAE--KAEIIMQQMRDRGLVKKTIDYNS 192
+++A FN + K P VY + K E KA ++ M +G+ + YNS
Sbjct: 255 LKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNS 314
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEAD 251
+M+ Y+ K + + M +G+ D ++SI+++ C E ++ M
Sbjct: 315 LMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHS-- 372
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY----AAC 307
+ + + Y + G +K G A ++ + MHN+ A VIT A C
Sbjct: 373 KSMAPNTVTYNSLIDGLLKYGRISDAWDLVNE-----MHNRGQPAD--VITYSSLLDALC 425
Query: 308 GNK--DDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
N D + + + K Q ++ Y ++ L K ++ A+ ++++ + D++
Sbjct: 426 KNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVK 485
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
+ N +++ C+ GL +A +L+ K + G P+ T+ + +N++++K V+ +++
Sbjct: 486 MYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREM 545
Query: 425 LV 426
+V
Sbjct: 546 IV 547
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 117/273 (42%), Gaps = 21/273 (7%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y ++++ K A + +M + + + Y +++ G K+ L
Sbjct: 202 PNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGL 261
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
++M K I D YTF+IL+ + + ++A+M +GV + Y + GY
Sbjct: 262 FNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVM-IKQGVDSNIVTYNSLMDGYF 320
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSR--------AYDFVITQYAACGNKDDVLRVWKR-Y 320
+KA V N +R +Y +I D+ + ++K +
Sbjct: 321 LVKQENKATFVF---------NTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMH 371
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
+++ Y +I LLK+ + A + E +R D+ + L+DA C+ +
Sbjct: 372 SKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVD 431
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
KA TLI K + +G +PN+ T+ ++ G +N +
Sbjct: 432 KAITLITKIKDQGIQPNIYTYTILVDGLCKNGR 464
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 113/271 (41%), Gaps = 31/271 (11%)
Query: 159 LNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGI 218
LN + A S K QM + + +N ++N + G+ S++ ++ + G
Sbjct: 77 LNHFHTAISFSK------QMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGF 130
Query: 219 DCDKYTFSILLSA-CAAASDGEGI---DKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
D T + L+ C E + D ++A +G LD Y T +G K G +
Sbjct: 131 HPDTVTITTLIKGLCLNGKVREALHFHDDVIA-----KGFHLDQVSYGTLINGLCKTGET 185
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK-----DDVLR--VWKRYKQNLKVY 327
AL VLRK + L++ Y+ +I + C +K D+ + KR ++ Y
Sbjct: 186 RAALQVLRKIDGLLVQPNVV-MYNTIID--SLCKDKLVIHASDLCSEMIVKRIFPDVVTY 242
Query: 328 NR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
Y C+I LK A +F + +N+ D+ N L+D C+ G + KA ++
Sbjct: 243 TTLIYGCLIVGRLK-----EAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVL 297
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+G + N+ T+ + GY Q K
Sbjct: 298 AVMIKQGVDSNIVTYNSLMDGYFLVKQENKA 328
>gi|334182333|ref|NP_172105.4| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity to an unknown protein T5J8.5 gi|4263522 from
Arabidopsis thaliana BAC T5J8 gb|AC004044 and contains
multiple PPR PF|01535 repeats. ESTs gb|AV565358,
gb|AV558710, gb|AV524184 come from this gene [Arabidopsis
thaliana]
gi|332189826|gb|AEE27947.1| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
Length = 1322
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 17/279 (6%)
Query: 131 KVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
+V ++ A S N + EK + S L+N Y + E+AE + QM VK I +
Sbjct: 947 RVLDMDSANSLANQMSEKNEATSN--CLINGYMGLGNLEQAESLFNQMP----VKDIISW 1000
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA 250
+M+ Y Q Y++ ++ ++M E+GI D+ T S ++SACA E I K V M
Sbjct: 1001 TTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLE-IGKEVHMYTL 1059
Query: 251 DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK 310
G VLD + + Y K G ++AL V L N F ++ +I AA G
Sbjct: 1060 QNGFVLDVYIGSALVDMYSKCGSLERALLVFFN---LPKKNLF--CWNSIIEGLAAHGFA 1114
Query: 311 DDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEW-ESRNLCHDIRIPNH 368
+ L+++ + + +++K ++ V ++ ++ +I+ + ++ ++
Sbjct: 1115 QEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGG 1174
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
++ + + GL+++A LI + EPN W + G
Sbjct: 1175 MVHLFSKAGLIYEALELIGNMEF---EPNAVIWGALLDG 1210
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 132/275 (48%), Gaps = 15/275 (5%)
Query: 133 QG-IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
QG + +A + N + +K P V Y ++++A A++ +KAE++++QM D+G+ +
Sbjct: 277 QGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLT 336
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
Y ++++ Y +G++K+ + +M KG+ TF+ +S+ + ++I M
Sbjct: 337 YTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMT 396
Query: 250 ADRGVVLDWTVYATAASGYVKAG----LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
+G + D Y+ GY G +++ ++ K V H ++ +I+ +A
Sbjct: 397 T-KGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCH-----CFNILISAHA 450
Query: 306 ACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
G D+ + V+ + Q ++ Y +IS+ + + A + F + S L +
Sbjct: 451 KRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTV 510
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRG-TEPNV 398
+ + LI +C G L KA+ L+ + +G PN+
Sbjct: 511 VYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNI 545
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 109/264 (41%), Gaps = 9/264 (3%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+ A FN V P++ + +L++ Y EKA ++ M G+ + YN+
Sbjct: 561 VMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNT 620
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+++ Y ++G L EM K + T+SI+L A K+ M D
Sbjct: 621 LVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEM-IDS 679
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS-RAYDFVITQYAACGNKD 311
G +D Y G + L+D+A+ + K + M KF + VI ++
Sbjct: 680 GTAVDIDTYKILLKGLCRNDLTDEAITLFHK--LGAMDCKFDITILNTVINALYKVRRRE 737
Query: 312 DVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+ ++ + V N Y +I +LLK +E A+ +F E R+ N +I
Sbjct: 738 EANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDII 797
Query: 371 DAYCRRGLLHKAETLIYKAQLRGT 394
++G + KA Y +++ GT
Sbjct: 798 RMLLQKGDIVKAG--YYMSKVDGT 819
>gi|227202654|dbj|BAH56800.1| AT2G41720 [Arabidopsis thaliana]
Length = 815
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 133/321 (41%), Gaps = 43/321 (13%)
Query: 151 LPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
+P V Y LLN+Y ++ KA+ + MR + YN++++ Y G +
Sbjct: 387 IPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVE 446
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ +ME+ GI + + LL+AC+ + +D +++ ++ RG+ L+ Y +A Y
Sbjct: 447 IFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS-RGINLNTAAYNSAIGSY 505
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
+ A +KA+A+ + K+ +K +
Sbjct: 506 INAAELEKAIALYQSMR-----------------------------------KKKVKADS 530
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+ +IS + A +E E ++ + + ++ AY ++G + +AE++ +
Sbjct: 531 VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ 590
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYY 448
++ G EP+V + M Y N SEK +A + L + G +P +A + +
Sbjct: 591 MKMAGCEPDVIAYTSMLHAY---NASEKWGKACELLLEMEANGI--EPDSIACSALMRAF 645
Query: 449 KKERDIEGADYFIKLLTGKEI 469
K + L+ KEI
Sbjct: 646 NKGGQPSNVFVLMDLMREKEI 666
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 142/374 (37%), Gaps = 55/374 (14%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+L+ WV GR + ++I++ + + WM + N+ + + L
Sbjct: 97 VLNSWV--GR-FARKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLH 153
Query: 130 AKVQGIEQAASYF------NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
A+ ++QA F +C P+ Y AL+NA+ A A +M M +
Sbjct: 154 ARHNWVDQARGLFFEMQKWSCKPDA----ETYDALINAHGRAGQWRWAMNLMDDMLRAAI 209
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
YN+++N +GN+++ + +M + G+ D T +I+LS A G K
Sbjct: 210 APSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS---AYKSGRQYSK 266
Query: 244 IVAMMEADRG--VVLDWTVYATAASGYVKAGLSDKALAVLR------------------- 282
++ E +G V D T + K G S +AL +
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 326
Query: 283 ------KSEVLMMHNKFSR-----------AYDFVITQYAACGNKDDVLRVWKRYKQNLK 325
K E+ F +Y+ ++ YA G L V KQN
Sbjct: 327 MHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI 386
Query: 326 VYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
+ + Y C+++S + A+++F ++ N LIDAY G L +A
Sbjct: 387 IPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVE 446
Query: 385 LIYKAQLRGTEPNV 398
+ + + G +PNV
Sbjct: 447 IFRQMEQDGIKPNV 460
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 147 EKLKLP---SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
E L +P VY ++L AY+ +AE I QM+ G I Y SM++ Y + +
Sbjct: 557 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKW 616
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSA 231
K L+ EME GI+ D S L+ A
Sbjct: 617 GKACELLLEMEANGIEPDSIACSALMRA 644
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 148/357 (41%), Gaps = 14/357 (3%)
Query: 68 VPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV--AIR 125
V L+DQ G + +I L+ + S A+ + M K P V +
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG---CQPDLVTYGVV 227
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
++ + K + A + N + + P V Y +++ K + A + ++M +G+
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ Y+S+++ G + L+ +M E+ I+ D +TFS L+ A +K
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR--AYDFVI 301
+ M R + Y++ +G+ D+A + E ++ + F Y+ +I
Sbjct: 348 LYDEM-VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF---EFMVSKHCFPDVVTYNTLI 403
Query: 302 TQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLC 360
+ ++ + V++ Q V N Y +I L + + A++IF+E S +
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+I N L+D C+ G L KA + Q EP + T+ +M G + + E G
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 119/273 (43%), Gaps = 13/273 (4%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
+LLN Y +K +A ++ QM G T+ +N++++ + + +L+ M K
Sbjct: 156 SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 215
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR---GVVLDWTVYATAASGYVKAGL 273
G D T+ ++++ D + ++ ME + GV+ +Y T G K
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL----IYNTIIDGLCKYKH 271
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK---RYKQNLKVYNRG 330
D AL + ++ E + Y +I+ G D R+ K N V+
Sbjct: 272 MDDALNLFKEMETKGIRPNVV-TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT-- 328
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
+ +I + +K + AEK+++E R++ I + LI+ +C L +A+ +
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ P+V T+ + G+ + + E+G+E ++
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 167/405 (41%), Gaps = 29/405 (7%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
L+D+ V +G D+ +++ L KR L ++ + K L P + +D
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNG--LCKRGDTDLAFNL-LNKMEQGKLEPGVLIYNTIID 264
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+ K + ++ A + F + K P+V Y +L++ A ++ M +R +
Sbjct: 265 GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 324
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
++++++ + + G + + L EM ++ ID T+S L++ + +D+
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH---DRLDEAK 381
Query: 246 AMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVIT 302
M E + D Y T G+ K ++ + V R+ S+ ++ N + Y+ +I
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT--YNILIQ 439
Query: 303 QYAACGNKDDVLRVWKR-----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
G+ D ++K N+ YN ++ L K +E A +FE +
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT----LLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ I N +I+ C+ G + L L+G +P+V + M +G+ + E+
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 418 VEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIK 462
K+ + E GT P+ C + ++ D E + IK
Sbjct: 556 DALFKE---MKEDGTL--PNSGCYNTLIRARLRDGDREASAELIK 595
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 111/277 (40%), Gaps = 44/277 (15%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PS+ Y +L+N + ++A+ + + M + + YN+++ + + YK+++
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK---YKRVEEG 415
Query: 210 MH---EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAAS 266
M EM ++G+ + T++IL+ A D + +I M +D GV + Y T
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLD 474
Query: 267 GYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKV 326
G K G +KA+ V +R K +
Sbjct: 475 GLCKNGKLEKAMVVFE---------------------------------YLQRSKMEPTI 501
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
Y Y +I + K +E +F + + D+ N +I +CR+G +A+ L
Sbjct: 502 YT--YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ + GT PN + + L++ E E +K+
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 111/275 (40%), Gaps = 49/275 (17%)
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVA 246
I+++ +++ + + + SL +M+ GI + YT+SIL++ C + + +
Sbjct: 82 IEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGK 141
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV----------------LMMH 290
MM+ G + ++ +GY + +A+A++ + V L +H
Sbjct: 142 MMKL--GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 199
Query: 291 NKFSRA------------------YDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVY 327
NK S A Y V+ G+ D + + +Q + +Y
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
N +I L K+ M+ A +F+E E++ + ++ + LI C G A L+
Sbjct: 260 NT----IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
R P+V T+ + +++ K VEA K
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEG---KLVEAEK 347
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 119/277 (42%), Gaps = 14/277 (5%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ Y A + ++MR G+ YN+++ Y N + S + EME
Sbjct: 126 YALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEME 185
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWT----VYATAASGYVK 270
+GI + TFS ++S ++ + E +K R V +W +Y++ Y K
Sbjct: 186 IEGIFPNAATFSAIISGYGSSGNVEAAEKWF-----QRSVSENWNHNVAIYSSIIHAYCK 240
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK----QNLKV 326
AG ++A A++ E + Y+ ++ YA C + L V+ + K L
Sbjct: 241 AGNMERAEALVADMEEQGLEATLG-LYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSP 299
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
Y C+I+ K M A + +E +++ + + + L+D Y + G A ++
Sbjct: 300 TAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVF 359
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G EP+ T+ ++ + ++ Q + ++ + +
Sbjct: 360 EDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGR 396
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 124/305 (40%), Gaps = 36/305 (11%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+N Y KA ++M+ +G+ Y+ +++ Y Q G++ S+ +M
Sbjct: 303 TYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDM 362
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG- 272
E GI+ D T++ILL A + +++ M+ RG Y T G++K G
Sbjct: 363 SEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKT-RGCSPTIQTYITIIDGFMKTGD 421
Query: 273 -------LSDKALAVLRKSEV---LMMHNKFS-----------------------RAYDF 299
+S+ LA R + ++MHN R+Y
Sbjct: 422 VRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTT 481
Query: 300 VITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
++ +A+ G + KR + K Y ++ + K M++A + EE
Sbjct: 482 LMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAG 541
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
+ + I N L+D + +RG + +A ++ K + G P++ ++ + +K
Sbjct: 542 VPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKAT 601
Query: 419 EAMKK 423
E +++
Sbjct: 602 ETIEE 606
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/261 (18%), Positives = 104/261 (39%), Gaps = 39/261 (14%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ + A+++ Y + + E AE Q+ Y+S+++ Y + GN ++ ++L+ +
Sbjct: 194 ATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNMERAEALVAD 253
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
MEE+G++ ++IL+ GY +
Sbjct: 254 MEEQGLEATLGLYNILM------------------------------------DGYARCH 277
Query: 273 LSDKALAVLR--KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG 330
+ + L V K+ + + + Y +I Y G L K K NR
Sbjct: 278 IEAQCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRN 337
Query: 331 -YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
Y ++ ++ +A +FE+ + D N L+ A+C+ + +A L+ +
Sbjct: 338 TYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRM 397
Query: 390 QLRGTEPNVRTWYLMATGYLQ 410
+ RG P ++T+ + G+++
Sbjct: 398 KTRGCSPTIQTYITIIDGFMK 418
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++ LL+ +A +A IMQ+MR G Y S +N + G+ +K + EM
Sbjct: 548 IFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETIEEM 607
Query: 214 EEKGIDCDKYTFSILLSACAAASDGE 239
+++ + + T++IL+ + S E
Sbjct: 608 KQQDLQPNLQTYTILIHGWTSVSHPE 633
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 111/256 (43%), Gaps = 7/256 (2%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
KA ++++M D GL + YN +++ + G+ L+ M I+ D TF+ ++
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR---KSEV 286
+A + + +M +G+ LD T G K G + AL +L K +
Sbjct: 484 NAFCKQGKADVASAFLGLM-LRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542
Query: 287 LMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMES 346
L + + D + C K+++ + K K L Y ++ L++ +
Sbjct: 543 LTTPHSLNVILDML---SKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
+ +I E + ++ +I+ C+ G + +AE L+ Q G PN T+ +M
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659
Query: 407 GYLQNNQSEKGVEAMK 422
GY+ N + ++ +E ++
Sbjct: 660 GYVNNGKLDRALETVR 675
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 132/351 (37%), Gaps = 30/351 (8%)
Query: 102 ALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYF---------NCVPEKLKLP 152
++ MW+ K S++ P L LI G+ + A C E LKL
Sbjct: 86 CVRFFMWVCKHSSYCFDPTQKNQLLKLIVS-SGLYRVAHAVIVALIKECSRCEKEMLKLM 144
Query: 153 ----------------SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNV 196
Y +LL + A A + ++M G V IDY +++N
Sbjct: 145 YCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNA 204
Query: 197 YYQTGNYKKLDSLMHEMEEKGIDCDKYT-FSILLSACAAASDGEGIDKIVAMMEADRGVV 255
+ G + + M ++ + G D + S+LL C + + + K+ +M +
Sbjct: 205 LCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDAL-KVFDVMSKEVTCA 263
Query: 256 LDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLR 315
+ Y+ G + G ++A L+ +R Y +I G D
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFG-LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 316 VW-KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
++ + + K Y +I L + +E A + + + + N LI+ YC
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
+ G + A L+ + R +PNVRT+ + G + + K V +K+ L
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433
>gi|225456802|ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
gi|147821419|emb|CAN76897.1| hypothetical protein VITISV_010606 [Vitis vinifera]
Length = 692
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 139/309 (44%), Gaps = 11/309 (3%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
AL+ ++ +A II +M +G+ I YN++M+ Y ++ ++ + L EM+ K
Sbjct: 318 ALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAK 377
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA-GLSD 275
G+ T++IL+ A + E I+ ++ M+ D G+ + Y S Y + +SD
Sbjct: 378 GVMPTSATYNILMDAYSRRMQPEIIENLLLEMQ-DMGLEPNVKSYTCLISAYGRQKKMSD 436
Query: 276 KAL-AVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYIC 333
A A LR +V + S +Y +I Y+ G + ++ K + +K Y
Sbjct: 437 MAADAFLRMKKVGI--KPTSHSYTALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTA 494
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
++ + + ++ KI++ S + N L+D + ++G +A +I++ G
Sbjct: 495 LLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEFGKIG 554
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERD 453
+P V T+ ++ Y + Q + + +K+ L KP + + Y + RD
Sbjct: 555 FQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTSL-----NLKPDSITYSTMIYAYVRVRD 609
Query: 454 IEGADYFIK 462
+ A ++ K
Sbjct: 610 FKRAFFYHK 618
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFS--RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
+AG+ D + +LR L +F R Y+ I+ ++CG DD +V+ + N
Sbjct: 219 RAGMGDDLMVLLRN---LPKTRQFRDVRIYNSAISGLSSCGRYDDAWKVYDEMETNNIRP 275
Query: 328 NRGYICVISSLLKFDGMES--AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+ ++ ++++ DG + A + F+ + + + + LI ++C GL K E L
Sbjct: 276 DHVTCSIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEVLGALIKSFCDEGL--KNEAL 333
Query: 386 IYKAQL--RGTEPNVRTWYLMATGYLQNNQSEKG 417
I ++++ +G N + + Y ++N+ E+
Sbjct: 334 IIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEA 367
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 133/304 (43%), Gaps = 22/304 (7%)
Query: 117 LTPADVAIRLDLI---AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKA 171
+ P DV I DLI K +A + F C+ ++ LP V + L++ + ++A
Sbjct: 578 IAPNDV-ICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEA 636
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
+ ++ D+GLV Y S+++ + G+ K L +M +KGI+ + T++ L++
Sbjct: 637 MGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALING 696
Query: 232 CAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
+ I K + + ++G+ + Y+T +GY K+ +A + +++ +
Sbjct: 697 LCKLGE---IAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGV 753
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEK 349
S Y +I GN + L ++ + + +I K + A +
Sbjct: 754 PPD-SFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQ 812
Query: 350 IFEEWESRNLCHDIRIPNH-----LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
+ E+ ++ PNH LI+ +C G + +AE L + Q R PNV T+ +
Sbjct: 813 LVEDMVDNHI-----TPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSL 867
Query: 405 ATGY 408
GY
Sbjct: 868 LHGY 871
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 137/327 (41%), Gaps = 29/327 (8%)
Query: 151 LPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
+P VY L+NAY E+ + ++ M ++G + + Y+ ++ + G+ +
Sbjct: 229 VPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALE 288
Query: 209 LMHEMEEKGIDCDKYTFSILLSA-CAAASDGEG---IDKIVAMMEADRGVVLDWTVYATA 264
L M KG+ D Y ++ L+ C EG +D++ M G+ D Y
Sbjct: 289 LKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTM-----GLKPDHVAYTAL 343
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVITQYAACGNKDDVLRVWKR---- 319
+G+VK SD A K E+ K + Y +I G+ + ++
Sbjct: 344 INGFVKQ--SDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMM 401
Query: 320 -YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
K +++ YN C+I K ME A ++ E + NL + + +++ C G
Sbjct: 402 GIKPDIQTYN----CLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGD 457
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSK 438
L +A L + G +PN+ + + G ++ + E EA+K V+ + G P
Sbjct: 458 LTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFE---EAIKILGVMKDQG--LSPDV 512
Query: 439 ECL-AACLGYYKKERDIEGADYFIKLL 464
C +G+ K + EG Y ++++
Sbjct: 513 FCYNTVIIGFCKAGKMEEGKSYLVEMI 539
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 111/261 (42%), Gaps = 13/261 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y L++ + K + + + ++ +M GL + Y +++N + + + + EM
Sbjct: 304 IYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEM 363
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ I + +T+ L+ D E + + + M G+ D Y GY K
Sbjct: 364 FARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTM-MGIKPDIQTYNCLIEGYYKVQN 422
Query: 274 SDKALAVLRKSEVLMMHNKFSRAY--DFVITQYAACGNKDDVLRVWKRYKQ----NLKVY 327
+KA +L + + N + AY ++ CG D+ R + +++ LK
Sbjct: 423 MEKAYELLIE---IKKENLTANAYMCGAIVNGLCHCG---DLTRANELFQEMISWGLKPN 476
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y ++ L+K E A KI + + L D+ N +I +C+ G + + ++ +
Sbjct: 477 IVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLV 536
Query: 388 KAQLRGTEPNVRTWYLMATGY 408
+ +G +PNV T+ GY
Sbjct: 537 EMIAKGLKPNVYTYGAFIHGY 557
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 145/379 (38%), Gaps = 64/379 (16%)
Query: 89 IIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIA--KVQGIEQAASYFNCVP 146
I+K RF A++I M + L+P +I K +E+ SY +
Sbjct: 483 IVKGLVKEGRFEEAIKILGVMKDQG---LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMI 539
Query: 147 EKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
K P+VY A ++ Y A + AE +M D G+ + +++ Y + GN
Sbjct: 540 AKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTT 599
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--------DRGVVL 256
K + M ++G+ D T S+L+ G+ K + EA D+G+V
Sbjct: 600 KAFAKFRCMLDQGVLPDVQTHSVLI---------HGLSKNGKLQEAMGVFSELLDKGLVP 650
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV 316
D Y + S K G A++ DD+ +
Sbjct: 651 DVFTYTSLISNLCKEG-------------------DLKAAFEL----------HDDMCK- 680
Query: 317 WKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRR 376
K N+ YN +I+ L K + A ++F+ + L + + +I YC+
Sbjct: 681 -KGINPNIVTYNA----LINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKS 735
Query: 377 GLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKP 436
L +A L + +L G P+ + + G + +EK A+ L ++E G P
Sbjct: 736 ANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEK---ALSLFLGMVEEGIASTP 792
Query: 437 SKECLAACLGYYKKERDIE 455
+ L G++K + IE
Sbjct: 793 AFNALID--GFFKLGKLIE 809
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 100/257 (38%), Gaps = 39/257 (15%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y AL+N KA + + ++GL + ++ Y++++ Y ++ N + L H M+
Sbjct: 690 YNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMK 749
Query: 215 EKGIDCDKYTFSILLSACAAASDGE-GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
G+ D + + L+ C A + E + + M+E + + G+ K G
Sbjct: 750 LVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG---IASTPAFNALIDGFFKLG- 805
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
K AY V +D++ ++ + Y
Sbjct: 806 ------------------KLIEAYQLV----------EDMV------DNHITPNHVTYTI 831
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+I ++ AE++F E + RN+ ++ L+ Y R G + +L + RG
Sbjct: 832 LIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARG 891
Query: 394 TEPNVRTWYLMATGYLQ 410
+P+ W +M +L+
Sbjct: 892 IKPDDLAWSVMVDAHLK 908
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 122/285 (42%), Gaps = 15/285 (5%)
Query: 131 KVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
KVQ +E+A + ++ + Y+ A++N +A + Q+M GL +
Sbjct: 419 KVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIV 478
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAM 247
Y +++ + G +++ ++ M+++G+ D + + ++++ C A EG +V M
Sbjct: 479 IYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEM 538
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC 307
+ +G+ + Y GY +AG + +S + M+ + + D + T
Sbjct: 539 IA--KGLKPNVYTYGAFIHGYCRAG----EMQAAERSFIEMLDSGIA-PNDVICTDLIDG 591
Query: 308 GNKD-DVLRVWKRYK----QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
KD + + + +++ Q + + + +I L K ++ A +F E + L D
Sbjct: 592 YCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPD 651
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+ LI C+ G L A L +G PN+ T+ + G
Sbjct: 652 VFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALING 696
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 116/280 (41%), Gaps = 32/280 (11%)
Query: 25 SSSSYSTATGTSTREVTISLRKGSSMYKLYRMLSPMGDPNDSMV---------------- 68
+S +YST + ++ ++L+ + +G P DS V
Sbjct: 721 NSVTYSTIIAGYCKSANLT-----EAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEK 775
Query: 69 --PLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA--I 124
L VEEG +I F + A Q+ M +TP V I
Sbjct: 776 ALSLFLGMVEEGIA-STPAFNALIDGFFKLGKLIEAYQLVEDMVDNH---ITPNHVTYTI 831
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRG 182
++ V I++A F + ++ +P+V Y +LL+ Y + + +M RG
Sbjct: 832 LIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARG 891
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ + ++ M++ + + GN+ K L+ +M +G++ K ++IL+ A ++ +
Sbjct: 892 IKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVL 951
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR 282
K++ +E +G L T + +AG +D+AL VL
Sbjct: 952 KVLDEVE-KQGSKLSLATCGTLVCCFHRAGRTDEALRVLE 990
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 109/277 (39%), Gaps = 40/277 (14%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y AL++ + ++A + M G I YN+++N Y + K L
Sbjct: 310 PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYL 369
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME-ADRGVVLDWTVYATAASGY 268
EM +K + + T++ L+ G D I E G + D Y
Sbjct: 370 FEEMCQKELIPNTVTYNTLMHGLCHV--GRLQDAIALFHEMVAHGQIPDLATYRILLDYL 427
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
K D+A+A+L+ E N D +++
Sbjct: 428 CKKSHLDEAMALLKTIEG---------------------SNMDPDIQI------------ 454
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y VI + + +E+A IF S+ L ++R +I+ CRRGLL +A L +
Sbjct: 455 --YTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFME 512
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
G P+ T+ + G LQN ++ + ++ +++ L
Sbjct: 513 MDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEML 549
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 131/324 (40%), Gaps = 51/324 (15%)
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL-SACAAASDGEGIDKIV 245
T+D+N ++ +T Y + SL ++M+ GI D YT +IL+ S C G +
Sbjct: 67 TVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLA 126
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVIT 302
+++ G+ D + T G G AL + K M+ F Y +I
Sbjct: 127 KILKL--GLQPDTATFTTLIRGLCVEGKIGDALHLFDK----MIGEGFQPNVVTYGTLIN 180
Query: 303 QYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR---- 357
GN + +R+ + +Q N + Y +I SL K + A +F + +
Sbjct: 181 GLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISP 240
Query: 358 -------------NLCH------------------DIRIPNHLIDAYCRRGLLHKAETLI 386
NLC D+ I + ++DA C+ G + +A ++
Sbjct: 241 DIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVV 300
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLG 446
+RG EPNV T+ + G+ ++ + EA+K ++ G + P+ +
Sbjct: 301 DMMIIRGVEPNVVTYNALMDGHCLQSEMD---EAVKVFDTMVHNG--YAPNVISYNTLIN 355
Query: 447 YYKKERDIEGADYFIKLLTGKEII 470
Y K + ++ A Y + + KE+I
Sbjct: 356 GYCKIQRMDKATYLFEEMCQKELI 379
>gi|115463017|ref|NP_001055108.1| Os05g0294600 [Oryza sativa Japonica Group]
gi|113578659|dbj|BAF17022.1| Os05g0294600 [Oryza sativa Japonica Group]
gi|125551683|gb|EAY97392.1| hypothetical protein OsI_19323 [Oryza sativa Indica Group]
gi|215697097|dbj|BAG91091.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630985|gb|EEE63117.1| hypothetical protein OsJ_17925 [Oryza sativa Japonica Group]
Length = 757
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 147/341 (43%), Gaps = 28/341 (8%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+ I+L+ + +A II M +G+ T YN+++N Y + ++ + + EM
Sbjct: 376 ICISLIKIFCDNGLKTEALIIQSAMEKKGIASNTSMYNTLINAYCKANQIEEAEGVFVEM 435
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY-VKAG 272
+EKG+ T++IL+ A E ++ ++ M+ D G+ + Y Y +
Sbjct: 436 KEKGLSATAMTYNILMGAYCRRLQPEVVESLLLEMQ-DLGLRPNARSYNFLIRVYGQQKK 494
Query: 273 LSDKAL-AVLR-KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNR 329
+S+KA A LR K++ +M S Y ++ YA G + + K + LK
Sbjct: 495 MSEKAEDAFLRMKTDGIM---PTSSTYTSLLCAYAVNGLHEKAYLTYVDMKREGLKPSLE 551
Query: 330 GYICVISSLLKFDGMESAEKIFEEWES--RNLCHDIRIPNHLI-DAYCRRGLLHKAETLI 386
Y +I F EK+ E W S R+ H++ D + GL +A +I
Sbjct: 552 TYTALID---MFRRAGDTEKLMETWRSMINEKVPGTRVIFHMVLDGLAKHGLYVQATDVI 608
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLG 446
Y+ + G +P V T+ ++ + + Q K + +K+ A KP + +
Sbjct: 609 YEFRRAGLQPTVMTYNILMNAFARGGQHYKLPQLLKEM-----AAMELKPDSVTYSTMIY 663
Query: 447 YYKKERDIEGADYFIKLLTGKEIISADLQD-----RLLNNI 482
Y + RD A Y+ KL+ + S L D +LLN +
Sbjct: 664 AYARVRDFSRAFYYHKLM----VRSGQLPDVSSYKKLLNTL 700
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 102/263 (38%), Gaps = 38/263 (14%)
Query: 161 AYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC 220
A A+ A++ I++ + + + YN+ M+ G Y + ME+K I
Sbjct: 277 ALGRAQMADEVLEIVESLPPERRFSEAVLYNAAMSGLAYRGRYDDTWKVFKLMEKKNIQP 336
Query: 221 DKYTFSILLSAC-AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALA 279
D T I+L + + + + ME +GV + + + GL
Sbjct: 337 DHMTSLIMLDVMNKSKTSAKDAWEFFQRME-RKGVKWSLDICISLIKIFCDNGL------ 389
Query: 280 VLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLL 339
K+E L++ + + K N +YN +I++
Sbjct: 390 ---KTEALIIQSAMEK----------------------KGIASNTSMYN----TLINAYC 420
Query: 340 KFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVR 399
K + +E AE +F E + + L N L+ AYCRR E+L+ + Q G PN R
Sbjct: 421 KANQIEEAEGVFVEMKEKGLSATAMTYNILMGAYCRRLQPEVVESLLLEMQDLGLRPNAR 480
Query: 400 TWYLMATGYLQNNQ-SEKGVEAM 421
++ + Y Q + SEK +A
Sbjct: 481 SYNFLIRVYGQQKKMSEKAEDAF 503
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 29/272 (10%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQ-QMRDRGLVK 185
+ K I+ A F + E+ P+ V L++A+ C + A + ++ +M RG+
Sbjct: 194 LCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAH-CKEGDVTAGLELRWEMATRGVKA 252
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
+ YN+++N + + + K + ++ EM + G+ DK T++ L+ C +GE +D +
Sbjct: 253 DLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGC--CKEGE-LDTAM 309
Query: 246 AMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFV 300
M + +D GV LD Y SG KAG S A +L + MM + Y V
Sbjct: 310 EMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCE----MMEAGLQPDNTTYTMV 365
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNRG-------YICVISSLLKFDGMESAEKIFEE 353
I + C N D V +K ++ N+G Y V++ M++A+ +
Sbjct: 366 IDAF--CKNGD----VKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNA 419
Query: 354 WESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+ +C + N L+D +C+ G + E L
Sbjct: 420 MLNIGVCPNDITYNILLDGHCKHGKVRDTEEL 451
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 120/278 (43%), Gaps = 10/278 (3%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P VY A + + A + ++M +RGL T+ ++++ + + G+ L
Sbjct: 182 PDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLEL 241
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
EM +G+ D ++ L++ D + + IV M D G+ D Y T G
Sbjct: 242 RWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKD-GLKPDKVTYTTLIDGCC 300
Query: 270 KAGLSDKALAVLRK--SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-KRYKQNLKV 326
K G D A+ + ++ E + + + Y +I+ + G D R+ + + L+
Sbjct: 301 KEGELDTAMEMKQEMSDEGVALDDV---TYTALISGLSKAGRSVDAERILCEMMEAGLQP 357
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
N Y VI + K +++ K +E +++ I N +++ +C G + A+ L+
Sbjct: 358 DNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLL 417
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
G PN T+ ++ G+ ++ + + E +K A
Sbjct: 418 NAMLNIGVCPNDITYNILLDGHCKHGKV-RDTEELKSA 454
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 114/296 (38%), Gaps = 16/296 (5%)
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
+ D G+ + +N +M ++G ++ EM +G+ TF+ L+S AS
Sbjct: 104 HLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKAS 163
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA 296
D + + +M A G+ D Y G K G A+ + + M +
Sbjct: 164 DLNNANALRGLM-AKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEE-----MCERGLNP 217
Query: 297 YDFVITQY--AACGNKDDVLRV---WKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
V+T A C D + W+ + +K Y +++ + M++A I
Sbjct: 218 NTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIV 277
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
EE L D LID C+ G L A + + G + T+ + +G
Sbjct: 278 EEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGL--- 334
Query: 412 NQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGK 467
+++ + V+A + ++EAG +P + + K D++ +K + K
Sbjct: 335 SKAGRSVDAERILCEMMEAG--LQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNK 388
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 112/255 (43%), Gaps = 15/255 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+N Y A + A + +M Y +++N + + G +K + + +M
Sbjct: 262 TYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQM 321
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+E G++ D Y ++ L+ A + A G +I ++M+ G D Y Y KAG
Sbjct: 322 QEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQ-HMGCEPDRASYNILVDAYGKAGF 380
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG--NK-DDVLRVWKRYKQNLKVYNRG 330
D A AV + + + + +++ +++ Y+ G NK +++L + L Y
Sbjct: 381 QDDAEAVFKDMKRVGITPTM-KSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTY--- 436
Query: 331 YICVISSLLKFDG----MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
V++S+L G E++ E + DI N LI+ Y + G + + E L
Sbjct: 437 ---VLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERMEDLF 493
Query: 387 YKAQLRGTEPNVRTW 401
+G +P+V TW
Sbjct: 494 QLLPSKGLKPDVVTW 508
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 89/435 (20%), Positives = 167/435 (38%), Gaps = 72/435 (16%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D + P LD W + + + + R+ K++ + I W+ +S+F P +
Sbjct: 110 DMLPPTLDAW---------DDIFTVAVQLRMRKQWDSIISICRWILLRSSF--KPDVICY 158
Query: 125 RLDLIAKVQGI---EQAASYFN-----CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQ 176
L + A Q + E ++Y C+P + Y L+ AY + EKAE +
Sbjct: 159 NLLIEAFGQKLLYKEAESTYLQLLEARCIPTE----DTYALLIKAYCISGLLEKAEAVFA 214
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS---------------------------- 208
+MR+ GL + YN+ +N + GN K +
Sbjct: 215 EMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAG 274
Query: 209 -------LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVY 261
L HEM + T++ L++A A E +++ M+ + G+ D Y
Sbjct: 275 KSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQ-EAGLEPDVYAY 333
Query: 262 ATAASGYVKAGLSDKALAVLRKSEVLMMH---NKFSRAYDFVITQYAACGNKDDVLRVWK 318
Y +AG A + LM H +Y+ ++ Y G +DD V+K
Sbjct: 334 NALMEAYSRAGYPYGAAEIFS----LMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFK 389
Query: 319 RYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
K+ + + ++ ++S+ K + E+I + L D + N +++ Y R G
Sbjct: 390 DMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLG 449
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPS 437
K E ++ + ++ T+ ++ Y Q +E M+ LL + KP
Sbjct: 450 QFGKMEEVLRVMEKGSYVADISTYNILINRYGQAG----FIERMEDLFQLLPS-KGLKPD 504
Query: 438 KECLAACLGYYKKER 452
+ +G Y K++
Sbjct: 505 VVTWTSRIGAYSKKK 519
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 5/162 (3%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
++ LL+AY+ S K E I+ QM GL T NSM+N+Y + G + K++ ++ ME
Sbjct: 403 HMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVME 462
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ D T++IL++ A E ++ + ++ + +G+ D + + Y K L
Sbjct: 463 KGSYVADISTYNILINRYGQAGFIERMEDLFQLLPS-KGLKPDVVTWTSRIGAYSKKKLY 521
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV 316
K L + + M+ + AAC N+D +V
Sbjct: 522 LKCLEIFEE----MIDDGCYPDGGTAKVLLAACSNEDQTEQV 559
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y L+N Y A E+ E + Q + +GL + + S + Y + Y K + E
Sbjct: 471 STYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEE 530
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL 256
M + G D T +LL+AC+ E + ++ M D VL
Sbjct: 531 MIDDGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMHKDMKTVL 574
>gi|302801049|ref|XP_002982281.1| hypothetical protein SELMODRAFT_116350 [Selaginella moellendorffii]
gi|300149873|gb|EFJ16526.1| hypothetical protein SELMODRAFT_116350 [Selaginella moellendorffii]
Length = 515
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD---GEGIDKIVA 246
+ SM+ Y Q G Y+K L +M + ++ D+ TF +L+ACA SD G+ I V
Sbjct: 248 WTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAIHARV- 306
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
RG+ D V + Y K G D+A V K++ H S + +I YA
Sbjct: 307 ---MRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTK----HKDIS-LWTALIASYAR 358
Query: 307 CGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
G+ + L +++R +Q+ +++ N ++ ++S+ +E + F + ++
Sbjct: 359 HGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFASMAELGIEPNMEH 418
Query: 366 PNHLIDAYCRRGLLHKAETLIYK 388
+ L+D R G LH AE + +
Sbjct: 419 YSCLVDLLARAGHLHTAEEFLSR 441
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V I+L+N YA + +A + +++ +R I +NSM+ Y + ++ L L EM
Sbjct: 40 VGISLVNMYAKCGTVGEARKVFERINNR----SRILWNSMITAYQERDPHEALH-LFREM 94
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ +G+ D+ TF +L+AC A+D E + + D G D V + Y K G
Sbjct: 95 QPEGVSPDRITFMTVLNACVNAADLEN-GRTIHRRIVDSGFAADVRVATALFNMYAKCGS 153
Query: 274 SDKALAVL 281
+A V
Sbjct: 154 LGEARGVF 161
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 123/285 (43%), Gaps = 41/285 (14%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V AL N YA S +A + M + + + +N+M+ Y Q + + SL M
Sbjct: 140 VATALFNMYAKCGSLGEARGVFDSM----VFRDVVSWNNMIAAYVQGRDGEGAISLCWAM 195
Query: 214 EEKGIDCDKYTFSILLSACAAAS---DGEGI-----DKIVAMMEADRGVVLDWTVYATAA 265
+ +G+ DK TF+ LL+AC+ + DG I D I + + + WT TA
Sbjct: 196 QLEGMRPDKATFASLLNACSDPNRLVDGRQIHSEIFDNIFSNSQQHHRDLFLWTSMITA- 254
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV--ITQYAACGNKDDVLRVWKRYKQN 323
Y + G KAL + + MH++ A D V I+ AC + D+ R Q
Sbjct: 255 --YEQHGEYRKALELYEQ-----MHSRQVEA-DRVTFISVLNACAHLSDL-----RQGQA 301
Query: 324 L--KVYNRGY---ICVISSLL----KFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
+ +V RG + V +S++ K + A +FE+ + + DI + LI +Y
Sbjct: 302 IHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHK----DISLWTALIASYA 357
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
R G +A + + + G E + T+ M + E+G E
Sbjct: 358 RHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCE 402
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 124/328 (37%), Gaps = 40/328 (12%)
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
K+ +++AA+ + + LP V Y L+N E+A + +M + L+
Sbjct: 289 CKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDV 348
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS-ACAAASDGEGIDKIVA 246
+ YN+++N + + L+ EM EKG+ + T +I++ C + + I
Sbjct: 349 VSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITK 408
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL----RKS------------EVLMMH 290
M E+ G D Y T +GY KAG +A + RK+ L
Sbjct: 409 MEES--GFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCRE 466
Query: 291 NKFSRAYDF------------------VITQYAACGNKDDVLRVWKRYKQNLKVYNR-GY 331
K AY +I Y GN D L++W K+ + + Y
Sbjct: 467 KKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTY 526
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
C+I L + E A E L D N ++ YCR G + KA K
Sbjct: 527 NCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+P+V T ++ G EK ++
Sbjct: 587 NSFKPDVFTCNILLRGLCMEGMLEKALK 614
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 117/282 (41%), Gaps = 41/282 (14%)
Query: 147 EKLKLPSVYI-ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
+ +K+ SV + +L K E+A ++ R RG + Y +++ Y++ GN +
Sbjct: 447 KNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDR 506
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
L EM+EK I T++ ++ C + I K+ ++E+ G++ D T Y T
Sbjct: 507 ALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES--GLLPDETTYNTI 564
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
GY + G +KA K M+ N F K DV
Sbjct: 565 LHGYCREGDVEKAFQFHNK----MVENSF----------------KPDVFTC-------- 596
Query: 325 KVYNRGYICVISSLLKFDGM-ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
+ RG +C+ +GM E A K+F W S+ D N LI + C+ G L A
Sbjct: 597 NILLRG-LCM-------EGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAF 648
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
L+ + + + P+ T+ + T + + + E M K L
Sbjct: 649 NLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKML 690
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 104/261 (39%), Gaps = 16/261 (6%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDR---GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
LLN+ S+ + D G+V +N ++ Y +K ++ M
Sbjct: 175 TLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVM 234
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ D T++ +L A C G+ D ++ M RG++ + Y GY K G
Sbjct: 235 GKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDM--KSRGLLPNRNTYNILVYGYCKMG 292
Query: 273 LSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
+A V+ LM N Y+ +I G ++ ++ + +NLK+
Sbjct: 293 WLKEAANVIE----LMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKL-RDEMENLKLLPD 347
Query: 330 --GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y +I+ L++ + A K+ EE + + + N ++ YC+ G + A I
Sbjct: 348 VVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTIT 407
Query: 388 KAQLRGTEPNVRTWYLMATGY 408
K + G P+ T+ + GY
Sbjct: 408 KMEESGFSPDCVTYNTLINGY 428
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 137/357 (38%), Gaps = 51/357 (14%)
Query: 142 FNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
+NC P+ + Y +L+A A ++ M+ RGL+ YN ++ Y + G
Sbjct: 237 YNCSPDNV----TYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMG 292
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME------------ 249
K+ +++ M + + D +T+++L++ E K+ ME
Sbjct: 293 WLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYN 352
Query: 250 ----------------------ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
+++GV + + Y K G D A + K E
Sbjct: 353 TLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKME-- 410
Query: 288 MMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYICVISSLLKFDG 343
+ FS Y+ +I Y GN + R ++N+K+ + ++ +L +
Sbjct: 411 --ESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKK 468
Query: 344 MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYL 403
+E A K+ R D LI Y + G + +A L + + + P+ T+
Sbjct: 469 LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNC 528
Query: 404 MATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYF 460
+ G Q ++E+ + + + LLE+G P + L Y +E D+E A F
Sbjct: 529 IIGGLCQCGKTEQAISKLNE---LLESGLL--PDETTYNTILHGYCREGDVEKAFQF 580
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 135 IEQAASYFNCVPEKLKLPSVYIA--LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+E+A + N + E P V+ LL EKA + +G T+ YN+
Sbjct: 574 VEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNT 633
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
++ + G +L+ EMEEK + D YT++ +++A
Sbjct: 634 LITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 151/345 (43%), Gaps = 17/345 (4%)
Query: 64 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA 123
+D++ LL + E G D I++K+ R AL + M K+ V +P DV
Sbjct: 60 DDAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEG-VCSP-DVV 117
Query: 124 IRLDLIA---KVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQM 178
+I K I +A + ++ + ++ +P V + +++NA A++ + AE++++QM
Sbjct: 118 TYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQM 177
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILLSACAAASD 237
D G+ + Y SM++ Y G +++ + EM +G+ D ++ S + S C
Sbjct: 178 VDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRS 237
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR--KSEVLMMHNKFSR 295
E + +M A +G + Y GY G ++ K + ++ +
Sbjct: 238 KEAAEIFYSM--AAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVAN---CL 292
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
+ +I YA G D+ + + + Q L Y +IS+L + + A F +
Sbjct: 293 VFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQM 352
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG-TEPNV 398
+ + + + LI +C G L KA+ L+Y+ G PN+
Sbjct: 353 IGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNI 397
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 11/206 (5%)
Query: 209 LMHEMEEKGIDCDKYTFSILLS-ACAAASDGEGIDKIVAMMEADRGVV-LDWTVYATAAS 266
L+ M E G D ++++I+L C + +D ++ MM + GV D Y T
Sbjct: 66 LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALD-LLRMMAKEEGVCSPDVVTYNTVIH 124
Query: 267 GYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQN 323
G+ K G KA + + MM F ++ +I D+ + ++ N
Sbjct: 125 GFFKEGKIGKACNLYHE----MMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDN 180
Query: 324 LKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
N+ Y +I E A K+F E R L DI N +D+ C+ G +A
Sbjct: 181 GVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEA 240
Query: 383 ETLIYKAQLRGTEPNVRTWYLMATGY 408
+ Y +G PN+ T+ ++ GY
Sbjct: 241 AEIFYSMAAKGHRPNIVTYGILLHGY 266
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 98/237 (41%), Gaps = 5/237 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++ L++ Y KA ++ M G+ T YN+++N Y+++G +L EM
Sbjct: 434 MFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREM 493
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+K I T++I+L A K++ M G + Y G +
Sbjct: 494 SDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEM-IGCGTTVSLPTYNIILKGLCRNNC 552
Query: 274 SDKALAVLRKSEVLMMHNKFS-RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-Y 331
+D+A+ + +K + M+ KF+ + +I +++ ++ + V N Y
Sbjct: 553 TDEAIVMFQK--LCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTY 610
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+I +LLK +E A+ +F E R+ N I +G + KA + K
Sbjct: 611 GIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSK 667
>gi|115471209|ref|NP_001059203.1| Os07g0222700 [Oryza sativa Japonica Group]
gi|34394024|dbj|BAC84055.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113610739|dbj|BAF21117.1| Os07g0222700 [Oryza sativa Japonica Group]
gi|117380751|gb|ABK34463.1| DNA-binding protein [Oryza sativa Japonica Group]
Length = 411
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 127/275 (46%), Gaps = 6/275 (2%)
Query: 144 CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
C+ + +Y L+ A +KAE + ++++D L + T+ + M + Y+
Sbjct: 38 CIGRLCRNEVLYETLIVNCVLAGDIQKAEEVFKEIKDLCL-RLTVTLCNQMILLYKRIAP 96
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYAT 263
K+ S++ ME++ + +T+ +L+ ++D GI+ ++ M+A G+ +
Sbjct: 97 GKVASVLMLMEKENVKPSAFTYRLLIDLKGRSNDLAGIEVVLNEMKA-YGIEPSTSTQTM 155
Query: 264 AASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVITQYAACGNKDDVLRVWKRYKQ 322
A Y+ GL++KA AV+++ E + ++K R ++ YAA +DV R+W+ +
Sbjct: 156 VARFYIHGGLTEKAEAVVKEMEAQLSNSKDGRHVIKSLLHLYAALNKPNDVARIWEMCTE 215
Query: 323 NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
+ ++ I + + +E AE+ FE + + N +++ Y + LL K
Sbjct: 216 PML---EDFLSAIKAWGELGLIEKAEETFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKG 272
Query: 383 ETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ + + G TW + Y+ + + EK
Sbjct: 273 KQFVERMCRDGCPNGPLTWDALINLYVNSGEVEKA 307
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 7/142 (4%)
Query: 135 IEQAASYFNCV---PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYN 191
IE+A F + PEKL Y A+LN YA K K + +++M G + ++
Sbjct: 234 IEKAEETFEAMANAPEKLS-SKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCPNGPLTWD 292
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKY--TFSILLSACAAASDGEGIDKIVAMME 249
+++N+Y +G +K DS + + E+ D ++ L+ A D +KI ++
Sbjct: 293 ALINLYVNSGEVEKADSFLLNVAEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDRLK 352
Query: 250 ADRGVVLDWTVYATAASGYVKA 271
+ G YA YV A
Sbjct: 353 -NVGYAPRPLHYAVLLEAYVNA 373
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 18/268 (6%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMH 211
S Y AL++A++ A A + ++M G+ + YN +++VY + +K + +L+
Sbjct: 179 SAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVALVD 238
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
M+ GI D+YT++ L+S C + + K+ M A G D + + Y KA
Sbjct: 239 SMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRA-AGFEPDKVTFNSLLDVYGKA 297
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG- 330
+ D+A+ VL++ E+ Y+ +I+ Y KD +L+ K+ ++V +G
Sbjct: 298 RMHDEAIGVLKEMELGGCPPSVV-TYNSLISSYV----KDGLLKEAAELKEEMEV--KGI 350
Query: 331 ------YICVISSLLKFDGMESAEKIFEEWESRNLCH-DIRIPNHLIDAYCRRGLLHKAE 383
Y +IS L + +++A ++E RN C ++ N LI + RG +
Sbjct: 351 QPDVITYTTLISGLDRAGKIDAAIGTYDEM-LRNGCKPNLCTYNALIKLHGVRGKFPEMM 409
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQN 411
+ + G P+V TW + + QN
Sbjct: 410 AVFDDLRSAGFVPDVVTWNTLLAVFGQN 437
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 157/363 (43%), Gaps = 31/363 (8%)
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
L ++V G+ + VPE+ Y++L+++Y+ +++ I ++M + G+
Sbjct: 439 LDSEVSGVFKEMKKSGYVPER----DTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDI 494
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC--DKYTFSILLSACAAASDGEGIDKIV 245
YN++++ + G +++ + L EME +DC D+ ++S LL A A A + +DK+
Sbjct: 495 STYNAVLSALARGGRWEQAEKLFAEMEN--LDCRPDELSYSSLLHAYANA---KKLDKMK 549
Query: 246 AM--------MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY 297
A+ +E+ G+V + + + + ++KA L + + N + A
Sbjct: 550 ALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSE---TEKAFLELGRRRCSLDINVLN-AM 605
Query: 298 DFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
V + +++L + K NL Y ++ + E E I E +S
Sbjct: 606 VSVYGKNRMVKKVEEILSLMKGSSINLSTAT--YNSLMHMYSRLGDCEKCENILTEIKSS 663
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
D N +I AY R+G + +A L + + G P++ T+ + Y+ N+ E+
Sbjct: 664 GARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEA 723
Query: 418 VEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTG-KEIISADLQD 476
++ LV KP++ + L Y + I A F+ L IS Q
Sbjct: 724 ID-----LVRYMVTRGCKPNERTYNSILQEYCRHGKIADAKSFLSNLPQLHPGISKQEQQ 778
Query: 477 RLL 479
RLL
Sbjct: 779 RLL 781
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 110/268 (41%), Gaps = 24/268 (8%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
++ M++ G+ YN++++ + YK+ + EM G + DK TF+ LL
Sbjct: 236 LVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYG 295
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV------L 287
A + ++ ME G Y + S YVK GL +A + + EV +
Sbjct: 296 KARMHDEAIGVLKEMELG-GCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDV 354
Query: 288 MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESA 347
+ + D AA G D++LR K NL YN +L+K G+
Sbjct: 355 ITYTTLISGLDRAGKIDAAIGTYDEMLR--NGCKPNLCTYN--------ALIKLHGVRGK 404
Query: 348 EK----IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYL 403
+F++ S D+ N L+ + + GL + + + + G P T+
Sbjct: 405 FPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVS 464
Query: 404 MATGYLQNNQSEKGVEAMKKALVLLEAG 431
+ + Y + ++ +E K+ ++EAG
Sbjct: 465 LISSYSRCGLFDQSMEIYKR---MIEAG 489
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 107/251 (42%), Gaps = 11/251 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y AL+ + + + +R G V + +N+++ V+ Q G ++ + EM
Sbjct: 391 TYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEM 450
Query: 214 EEKGIDCDKYTFSILLSA---CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
++ G ++ T+ L+S+ C I K M+EA G+ D + Y S +
Sbjct: 451 KKSGYVPERDTYVSLISSYSRCGLFDQSMEIYK--RMIEA--GIYPDISTYNAVLSALAR 506
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNR 329
G ++A + + E L +Y ++ YA D + + + Y + ++ ++
Sbjct: 507 GGRWEQAEKLFAEMENLDCRPD-ELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHG 565
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
++ K + + EK F E R DI + N ++ Y + ++ K E ++ +
Sbjct: 566 LVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEIL--S 623
Query: 390 QLRGTEPNVRT 400
++G+ N+ T
Sbjct: 624 LMKGSSINLST 634
>gi|193806402|sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
Length = 577
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 17/279 (6%)
Query: 131 KVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDY 190
+V ++ A S N + EK + S L+N Y + E+AE + QM VK I +
Sbjct: 202 RVLDMDSANSLANQMSEKNEATSN--CLINGYMGLGNLEQAESLFNQMP----VKDIISW 255
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA 250
+M+ Y Q Y++ ++ ++M E+GI D+ T S ++SACA E I K V M
Sbjct: 256 TTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLE-IGKEVHMYTL 314
Query: 251 DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK 310
G VLD + + Y K G ++AL V L N F ++ +I AA G
Sbjct: 315 QNGFVLDVYIGSALVDMYSKCGSLERALLVFFN---LPKKNLF--CWNSIIEGLAAHGFA 369
Query: 311 DDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEW-ESRNLCHDIRIPNH 368
+ L+++ + + +++K ++ V ++ ++ +I+ + ++ ++
Sbjct: 370 QEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGG 429
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
++ + + GL+++A LI + EPN W + G
Sbjct: 430 MVHLFSKAGLIYEALELIGNMEF---EPNAVIWGALLDG 465
>gi|30688764|ref|NP_850356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75158748|sp|Q8RWS8.1|PP199_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g41720; AltName: Full=Protein EMBRYO DEFECTIVE 2654
gi|20268762|gb|AAM14084.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|21436141|gb|AAM51317.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330254931|gb|AEC10025.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 133/321 (41%), Gaps = 43/321 (13%)
Query: 151 LPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
+P V Y LLN+Y ++ KA+ + MR + YN++++ Y G +
Sbjct: 387 IPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVE 446
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ +ME+ GI + + LL+AC+ + +D +++ ++ RG+ L+ Y +A Y
Sbjct: 447 IFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS-RGINLNTAAYNSAIGSY 505
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
+ A +KA+A+ + K+ +K +
Sbjct: 506 INAAELEKAIALYQSMR-----------------------------------KKKVKADS 530
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+ +IS + A +E E ++ + + ++ AY ++G + +AE++ +
Sbjct: 531 VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ 590
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYY 448
++ G EP+V + M Y N SEK +A + L + G +P +A + +
Sbjct: 591 MKMAGCEPDVIAYTSMLHAY---NASEKWGKACELFLEMEANGI--EPDSIACSALMRAF 645
Query: 449 KKERDIEGADYFIKLLTGKEI 469
K + L+ KEI
Sbjct: 646 NKGGQPSNVFVLMDLMREKEI 666
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 143/374 (38%), Gaps = 55/374 (14%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+L+ WV GR + ++I++ + + WM + N+ + + L
Sbjct: 97 VLNSWV--GR-FARKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLH 153
Query: 130 AKVQGIEQAASYF------NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGL 183
A+ ++QA F +C P+ Y AL+NA+ A A +M M +
Sbjct: 154 ARHNWVDQARGLFFEMQKWSCKPDA----ETYDALINAHGRAGQWRWAMNLMDDMLRAAI 209
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
YN+++N +GN+++ + +M + G+ D T +I+LSA + G K
Sbjct: 210 APSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKS---GRQYSK 266
Query: 244 IVAMMEADRG--VVLDWTVYATAASGYVKAGLSDKALAVLR------------------- 282
++ E +G V D T + K G S +AL +
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 326
Query: 283 ------KSEVLMMHNKFSR-----------AYDFVITQYAACGNKDDVLRVWKRYKQNLK 325
K E+ F +Y+ ++ YA G L V KQN
Sbjct: 327 MHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI 386
Query: 326 VYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
+ + Y C+++S + A+++F ++ N LIDAY G L +A
Sbjct: 387 IPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVE 446
Query: 385 LIYKAQLRGTEPNV 398
+ + + G +PNV
Sbjct: 447 IFRQMEQDGIKPNV 460
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 147 EKLKLP---SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
E L +P VY ++L AY+ +AE I QM+ G I Y SM++ Y + +
Sbjct: 557 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKW 616
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSA 231
K L EME GI+ D S L+ A
Sbjct: 617 GKACELFLEMEANGIEPDSIACSALMRA 644
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 111/286 (38%), Gaps = 55/286 (19%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P VY AL+ E A + ++M RG+ + + +++ + + G+ + + L
Sbjct: 184 PDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLEL 243
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
EM E+G+ D T++ +++ A D + IV M + G+ D Y T GY
Sbjct: 244 HREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRS-AGLRPDTVTYTTLIDGYC 302
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
K D A+ + KQN+
Sbjct: 303 KEEELDMAMEI----------------------------------------KQNMVAEGV 322
Query: 330 G-----YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
G Y +IS L K AE++ E L D +IDA+CR+G +
Sbjct: 323 GLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLR 382
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA 430
L+ + Q +G +P V T+ ++ G+ + Q MK A +LL A
Sbjct: 383 LLKEMQNKGRKPGVVTYNVIMNGFCKLGQ-------MKNADMLLNA 421
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 153 SVYIALLNAYACAKSAEKAEI-IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
+ Y +++A+ C K K + ++++M+++G + YN +MN + + G K D L++
Sbjct: 362 TTYTMVIDAF-CRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLN 420
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
M G+ D T++ILL G+ D + +++ +G V D VY + VK
Sbjct: 421 AMINIGVSPDDITYNILLD--GHCKHGKVTD--IEELKSAKGTVPDLGVYTSIVGEIVK 475
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
++ L++ + SA+ +F+E +SR + + N +I CR G L AETL + G
Sbjct: 122 LMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAG 181
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERD 453
P+V T+ + G + + E +K G KP+ + + K+ D
Sbjct: 182 VTPDVYTYGALIQGLCRVGRIEDARGVFEKM-----CGRGMKPNAVVFTILIDAHCKKGD 236
Query: 454 IE 455
E
Sbjct: 237 AE 238
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 140/317 (44%), Gaps = 16/317 (5%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDR-GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y ++N + ++A I+++M R G+ + Y S+++ + G + ++ EM
Sbjct: 80 YSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREM 139
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ KG++ DK+TFS L++ C A E + K+ + D Y G+ K+G
Sbjct: 140 KLKGVEPDKFTFSALITGWCNARKVDEAL-KLYKEILTSSSWKPDVVTYTALIDGFCKSG 198
Query: 273 LSDKALAVLRKSEVL-MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RG 330
+KA+ +L E + N + Y ++ G+ D L +++R V N
Sbjct: 199 NLEKAMKMLGVMEGRKCVPNVVT--YSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVT 256
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I L +++A + +E + D N L+D YCR G + +A+ L +
Sbjct: 257 YTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMA 316
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKG---VEAMKKALVLLEAGTRWKPSKECLAACLGY 447
+ P+ T+ + G+ ++ E+ +E MK A AG + GY
Sbjct: 317 TKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTA-----AGIDPDVVTYSIVV-AGY 370
Query: 448 YKKERDIEGADYFIKLL 464
+ +R +E A++ +++
Sbjct: 371 SRAKRFVEAAEFIQEMI 387
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 116/293 (39%), Gaps = 37/293 (12%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K ++QA F + K +P+V Y L++ A + A ++M +M
Sbjct: 229 LCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPD 288
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
T+ YN++++ Y + G ++ L EM K D+ T++ L+ AS E ++
Sbjct: 289 TVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLE 348
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
M+ G+ D Y+ +GY +A +F A +F+ A
Sbjct: 349 NMKTAAGIDPDVVTYSIVVAGYSRA-------------------KRFVEAAEFIQEMIA- 388
Query: 307 CGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
+N+ Y +I L K ++ A ++ + ++ + +
Sbjct: 389 ---------------RNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTF 433
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
N +I A CR G + +A L+ G EP + T+ + G+ + + E E
Sbjct: 434 NSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYE 486
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 74/202 (36%), Gaps = 37/202 (18%)
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-----------------SE 285
+++ M + V D Y+T +G+ K G D+A +LR+ +
Sbjct: 62 EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121
Query: 286 VLMMHNKFSRAYDFV------------------ITQYAACGNKDDVLRVWKRY--KQNLK 325
L K RA + V IT + D+ L+++K + K
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
Y +I K +E A K+ E R ++ + L+ C+ G L +A L
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241
Query: 386 IYKAQLRGTEPNVRTWYLMATG 407
+ +G PNV T+ + G
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHG 263
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 127/300 (42%), Gaps = 21/300 (7%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
++ A S FNC+ + P + +L + +K + ++M RG+ ++ N
Sbjct: 68 VDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNI 127
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI---DKIVAMM 248
++N + Q G S+ ++ + G + + TF+ L+ C + + DK+VA+
Sbjct: 128 LINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVAL- 186
Query: 249 EADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG 308
G + Y T G K G + AL +LR+ + ++ Y +I
Sbjct: 187 ----GFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVV-MYSTIIDGMCKDK 241
Query: 309 NKDDVLRVW-----KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
+ +D ++ K N+ Y+ +IS ++ A +F + S N+ D+
Sbjct: 242 HVNDAFDLYSEMVSKGISPNVVTYSA----LISGFFTVGKLKDAVDLFNKMISENIKPDV 297
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
N L+D +C+ G + A L+ + RG PN+ T+ + + ++ +K V + K
Sbjct: 298 YTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTK 357
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 119/298 (39%), Gaps = 45/298 (15%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + KV A V KL P+V Y +++ K A + +M +G+
Sbjct: 199 IDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGI 258
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ Y+++++ ++ G K L ++M + I D YTF+IL+ + K
Sbjct: 259 SPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALK 318
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQ 303
+V M DRG + Y++ K DKA+A+L K +
Sbjct: 319 LVDEMH-DRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLK------------------ 359
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
Q ++ Y +I L +E A IFE+ + +DI
Sbjct: 360 -----------------DQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKG--YDI 400
Query: 364 RIPNHLIDAY--CRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL---QNNQSEK 416
+ +++ Y C++GL +A L+ K + G P+ +T+ L+ +N+ +EK
Sbjct: 401 TVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEK 458
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 120/275 (43%), Gaps = 21/275 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V AL++ Y+ S E A+ + QM + K T+ +NS++ Y G ++ S+ +EM
Sbjct: 269 VACALIDMYSKCGSIEDAQCVFDQMPE----KTTVGWNSIIAGYALHGYSEEALSMYYEM 324
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ G+ D +TFSI++ CA + E + A + G LD Y K G
Sbjct: 325 RDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGL-VRHGFGLDIVANTALVDLYSKWGR 383
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
+ A V MM +K +++ +I Y G + + +++R V N
Sbjct: 384 IEDAKHVFD-----MMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFL 438
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH-----LIDAYCRRGLLHKAETLIYK 388
+ S + G+ +++ +E +ES + H I+ P +I+ R GLL +A LI
Sbjct: 439 AVLSACSYSGL--SDRGWEIFESMSRDHKIK-PRAMHYACMIELLGREGLLDEAFALIKD 495
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
A + P V W + T + E G A +K
Sbjct: 496 APFK---PTVNMWAALLTACRVHKNFELGKFAAEK 527
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 132/326 (40%), Gaps = 57/326 (17%)
Query: 147 EKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
E++K PS Y +++ YA +A + MR RG+ + Y S+++ Y + +
Sbjct: 299 ERIKKPSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDME 358
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK--------------------- 243
+ S +M+E+G++ T+SI++ A + + D+
Sbjct: 359 EALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMI 418
Query: 244 --------------IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL-RKSEVLM 288
+V ME + G+ +Y T GY G +K L V R E
Sbjct: 419 YAYCQTCNMDQAEALVREMEGE-GIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGF 477
Query: 289 MHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-----KQNLKVYNRGYICVISSLLKFDG 343
+ S Y +I YA G L V K K N+K Y+ +I+ LK
Sbjct: 478 APSVVS--YGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYS----MLINGFLKLKD 531
Query: 344 MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYL 403
+A IFE+ L D+ + N++I A+C G + +A ++ + Q P RT+
Sbjct: 532 WANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMP 591
Query: 404 MATGYLQNNQSEKGVEAMKKALVLLE 429
+ G+ + + MK+AL + +
Sbjct: 592 IIHGFARAGE-------MKRALDVFD 610
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 154 VYIALLNAYACAKSA--EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
Y ALL A C KS + A + ++M + + + T YN +++ + + G+ + LM
Sbjct: 693 TYEALLKA--CCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQ 750
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
+M++ G+ D +T++ ++AC A D K++ ME GV + Y T G+ +A
Sbjct: 751 QMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETS-GVKPNVKTYTTLIHGWARA 809
Query: 272 GLSDKALAVLRK 283
L +KAL ++
Sbjct: 810 SLPEKALRCFQE 821
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 108/251 (43%), Gaps = 7/251 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+N + K A I + + GL + YN+++ + G + ++ EM
Sbjct: 518 TYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEM 577
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+++ TF ++ A A + + + MM G + + G V+
Sbjct: 578 QKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRS-GCIPTVHTFNALILGLVEKRQ 636
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ---NLKVYNRG 330
+KA+ +L + L + Y ++ YAA G+ + + + L VY
Sbjct: 637 MEKAIEILDEM-ALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYT-- 693
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y ++ + K M+SA + +E ++N+ + + N LID + RRG + +A L+ + +
Sbjct: 694 YEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMK 753
Query: 391 LRGTEPNVRTW 401
G +P++ T+
Sbjct: 754 QGGVKPDIHTY 764
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 103/271 (38%), Gaps = 38/271 (14%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y +++ Y + EK + +++++ G + Y ++N+Y + G K + M
Sbjct: 448 IYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMM 507
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E GI + T+S+L++ G K+ DW VK GL
Sbjct: 508 ESAGIKHNMKTYSMLIN---------GFLKLK-----------DWANAFAIFEDVVKDGL 547
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYI 332
K +V++ Y+ +I + G D + + K K+ + +R ++
Sbjct: 548 ---------KPDVVL--------YNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFM 590
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I + M+ A +F+ + N LI + + KA ++ + L
Sbjct: 591 PIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALA 650
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G PN T+ + GY + K E K
Sbjct: 651 GVSPNEHTYTTIMHGYAALGDTGKAFEYFTK 681
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY L++ +A +A +MQQM+ G+ Y S +N + G+ + +M EM
Sbjct: 728 VYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEM 787
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVY----------AT 263
E G+ + T++ L+ A AS E + M+ G+ D VY AT
Sbjct: 788 ETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKL-AGLKPDKAVYHCLMTALLSRAT 846
Query: 264 AASGYVKAGL 273
YV+ G+
Sbjct: 847 VTEAYVRPGI 856
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 120/275 (43%), Gaps = 21/275 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V AL++ Y+ S E A+ + QM + K T+ +NS++ Y G ++ S+ +EM
Sbjct: 269 VACALIDMYSKCGSIEDAQCVFDQMPE----KTTVGWNSIIAGYALHGYSEEALSMYYEM 324
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ G+ D +TFSI++ CA + E + A + G LD Y K G
Sbjct: 325 RDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGL-VRHGFGLDIVANTALVDLYSKWGR 383
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
+ A V MM +K +++ +I Y G + + +++R V N
Sbjct: 384 IEDAKHVFD-----MMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFL 438
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH-----LIDAYCRRGLLHKAETLIYK 388
+ S + G+ +++ +E +ES + H I+ P +I+ R GLL +A LI
Sbjct: 439 AVLSACSYSGL--SDRGWEIFESMSRDHKIK-PRAMHYACMIELLGREGLLDEAFALIKD 495
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
A + P V W + T + E G A +K
Sbjct: 496 APFK---PTVNMWAALLTACRVHKNFELGKFAAEK 527
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 114/257 (44%), Gaps = 7/257 (2%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
ALL+ + E+ +++QM ++GL+ I YN+++ + G ++ L EM ++
Sbjct: 506 ALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQ 565
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR--GVVLDWTVYATAASGYVKAGLS 274
D YT++ L+ A D ID + ++ + G V + YA GY KA
Sbjct: 566 EFQPDTYTYNFLMKGLA---DMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRI 622
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYIC 333
+ A+ + + + S Y+ +I Y GN + ++ K + + Y
Sbjct: 623 EDAVKFFKNLDYEKVELS-SVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSS 681
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+I + ++ A++IFEE + L ++ LI +C+ G + +++ + G
Sbjct: 682 LIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNG 741
Query: 394 TEPNVRTWYLMATGYLQ 410
PN T+ +M GY +
Sbjct: 742 IRPNKITYTIMIDGYCK 758
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 8/201 (3%)
Query: 224 TFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
T ++LLS+ A++ ++ + A +GV D + TA + + K G A+ + K
Sbjct: 223 TCNLLLSSLVKANELHKSYEVFDL--ACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCK 280
Query: 284 SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY---KQNLKVYNRGYICVISSLLK 340
E L + Y+ VI G ++ LR R K N V G + IS L+K
Sbjct: 281 MEGLGVFPNVV-TYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVL--ISGLMK 337
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
+ E A ++ E S + + N LID YCR+G + +A + + ++G +PN T
Sbjct: 338 LEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVT 397
Query: 401 WYLMATGYLQNNQSEKGVEAM 421
+ + G+ ++NQ E+ + +
Sbjct: 398 FNTLLQGFCRSNQMEQAEQVL 418
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 130/308 (42%), Gaps = 37/308 (12%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PSV Y L++ + E+A ++ +M G + +N++++ Y + G+ + +
Sbjct: 323 PSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRV 382
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI-VAMMEADRGVVLDWTVYAT----A 264
EM KG+ + TF+ LL ++ E +++ V ++ + V +D Y
Sbjct: 383 RDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLME 442
Query: 265 ASGYVKA------------GLSDKALAVL--------RKSEVLMMHNKFSR----AYDFV 300
SG+V A +SD L L SE + + K + A + V
Sbjct: 443 RSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTV 502
Query: 301 ITQ---YAAC--GNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEW 354
+ + C GN ++V V K+ + + +R Y +I K+ +E A K+ EE
Sbjct: 503 TSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEM 562
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
+ D N L+ G + L+++A+ G PNV T+ L+ GY + ++
Sbjct: 563 VQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRI 622
Query: 415 EKGVEAMK 422
E V+ K
Sbjct: 623 EDAVKFFK 630
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 151 LPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
LP+ Y +L++ C ++A+ I ++MR+ GL+ Y +++ + + G + S
Sbjct: 673 LPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGS 732
Query: 209 LMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
++ EM GI +K T++I++ C + E + + M+ G+ D Y G
Sbjct: 733 ILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIR--NGIAPDTVTYNALQKG 790
Query: 268 YVK 270
Y K
Sbjct: 791 YCK 793
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 3/164 (1%)
Query: 111 KKSNFVLTPADVAIRLDLIAKVQGIEQAASYF-NCVPEKLKLPSV-YIALLNAYACAKSA 168
K+ FV A+ L+ K IE A +F N EK++L SV Y L+ AY +
Sbjct: 598 KEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNV 657
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
+A + M+ RG++ Y+S+++ G + + EM +G+ + + ++ L
Sbjct: 658 TEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTAL 717
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ + + I+ M ++ G+ + Y GY K G
Sbjct: 718 IGGHCKLGQMDIVGSILLEMSSN-GIRPNKITYTIMIDGYCKLG 760
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 110/266 (41%), Gaps = 38/266 (14%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVK-KTIDYNSMMNVYYQTGNYKKLDSLMHEMEE 215
AL++A A +AE + + G +K +T YN+++ Y + G+ K + ++ EM E
Sbjct: 273 ALISALGIAGRVPEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSE 332
Query: 216 KGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
G+ D+ T+S+L+ A A E ++ MEAD GV V++ +G+ G
Sbjct: 333 CGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD-GVKPSSYVFSRILAGFRDRGDWQ 391
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVI 335
KA AVLR+ MH A G + D Y +I
Sbjct: 392 KAFAVLRE-----MH---------------ASGVQPD---------------RHFYNVMI 416
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
+ K++ + A +F + D+ N LIDA+C+ G H ++K
Sbjct: 417 DTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGG-RHDCAMELFKEMRESNC 475
Query: 396 PNVRTWYLMATGYLQNNQSEKGVEAM 421
P T Y + L + GVE M
Sbjct: 476 PPGTTTYNIMINLLGEQERWVGVETM 501
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 109/269 (40%), Gaps = 3/269 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ALL Y S + AE ++ +M + G+ Y+ +++ Y + G ++ L+ EME
Sbjct: 307 YNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKEME 366
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
G+ Y FS +L+ D + ++ M A GV D Y + K
Sbjct: 367 ADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHAS-GVQPDRHFYNVMIDTFGKYNCL 425
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYIC 333
A+ V + + ++ +I + G D + ++K ++ N Y
Sbjct: 426 GHAMDVFNRMRGEGIEPDVV-TWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNI 484
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+I+ L + + E + E + + L +I L+D Y R G +A I + G
Sbjct: 485 MINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADG 544
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+P+ ++ + Y Q ++ + +K
Sbjct: 545 LKPSPTMYHALVNAYAQRGLADHALNVVK 573
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 73/169 (43%), Gaps = 3/169 (1%)
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV 316
D +++ S + +A L D AL +L ++ + + + S A +I+ G + +
Sbjct: 232 DAPLFSDLISAFARAALPDAALELLASAQAIGLTPR-SNAVTALISALGIAGRVPEAEAL 290
Query: 317 WKRY--KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
+ + +K R Y ++ +K +++AE + +E + D + L+DAY
Sbjct: 291 FLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYT 350
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
R G A L+ + + G +P+ + + G+ +K +++
Sbjct: 351 RAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLRE 399
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P++Y AL+NAYA A+ A +++ MR GL T+ NS++N + + + S++
Sbjct: 549 PTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVVEAFSVLQ 608
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
M+E D T++ L+ A E DK+ + E
Sbjct: 609 FMKENDFRPDVITYTTLMKALIRV---EQFDKVPVIYE 643
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
NC P + Y ++N + E +M +M+++GLV I Y ++++VY ++G
Sbjct: 474 NCPPGT----TTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGR 529
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
YK+ + M+ G+ + L++A A + +V M AD
Sbjct: 530 YKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRAD 578
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 134/332 (40%), Gaps = 43/332 (12%)
Query: 88 IIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPE 147
I+I +F R A + M+ K L + + K + ++ A + F +
Sbjct: 54 ILIDRFCKEGRLEEARNVLDEMSGKG-LALNAVGYNCLISALCKDEKVQDALNMFGDMSS 112
Query: 148 KLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
K P ++ +L+ E+A + Q M G++ TI YN++++ + + G ++
Sbjct: 113 KGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQE 172
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYAT 263
L+++M +G D T++ L+ A A + I+K +A+ E +G+ +
Sbjct: 173 ALKLVNDMLFRGCPLDDITYNGLIKALCRAGN---IEKGLALFEDMMSKGLNPNNISCNI 229
Query: 264 AASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN 323
+G + G AL LR M+H + +
Sbjct: 230 LINGLCRTGNIQHALEFLRD----MIHRGLT---------------------------PD 258
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
+ YN +I+ L K + A +F++ + +C D N LI +C+ G+ A
Sbjct: 259 IVTYNS----LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAH 314
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
L+ + G PN TWY++ + +++ E
Sbjct: 315 LLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 109/278 (39%), Gaps = 40/278 (14%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y L++ + E+A ++ +M +GL + YN +++ + + ++
Sbjct: 47 PNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNM 106
Query: 210 MHEMEEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+M KG D +TF S++ C E + M+ GV+ + Y T +
Sbjct: 107 FGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLL--EGVIANTITYNTLIHAF 164
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
++ G +AL ++++ R DD+ YN
Sbjct: 165 LRRGAMQEALK--------LVNDMLFRGCPL-----------DDI------------TYN 193
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+I +L + +E +FE+ S+ L + N LI+ CR G + A +
Sbjct: 194 G----LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRD 249
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
RG P++ T+ + G + ++++ + K V
Sbjct: 250 MIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQV 287
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 117/282 (41%), Gaps = 9/282 (3%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
I + G+ + CVP + Y LLN Y + + +M+
Sbjct: 96 IKEAMGVFRQMQGAGCVPN----AATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAA 151
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMM 248
YN ++NV+ + G +K++ +L H+M E+ ++ + T+ L+ AC E KI+ M
Sbjct: 152 TYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHM 211
Query: 249 EADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAAC 307
++GVV Y Y +A L ++AL +EV Y+ +I +A
Sbjct: 212 N-EKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEV--GSKPTVETYNSLIQMFAKG 268
Query: 308 GNKDDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
G + + + Q+ NR + VI + + E A K + E E D +
Sbjct: 269 GLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTL 328
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
++ YC GL+ ++E + + G P+V + +M Y
Sbjct: 329 EAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVY 370
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 107/249 (42%), Gaps = 3/249 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y LL+A A ++AE++ + M + G++ Y+ ++ + + +K+ L+ EM
Sbjct: 12 TYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEM 71
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E G D ++++LL A A + + + M+ G V + Y+ + Y + G
Sbjct: 72 ESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQG-AGCVPNAATYSILLNLYGRHGR 130
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYI 332
D + + +V + Y+ +I + G +V+ ++ ++N++ Y
Sbjct: 131 YDDVRDLFLEMKVSNTEPN-AATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYE 189
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I + K E A+KI + + + +I+AY + L +A
Sbjct: 190 GLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEV 249
Query: 393 GTEPNVRTW 401
G++P V T+
Sbjct: 250 GSKPTVETY 258
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 114/275 (41%), Gaps = 10/275 (3%)
Query: 178 MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
MR G+ + YN++++ + G + + + M E GI D T+S L+ +
Sbjct: 1 MRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNR 60
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE-VLMMHNKFSRA 296
E + +++ ME+ G D T Y + ++G +A+ V R+ + + N +
Sbjct: 61 LEKVSELLKEMESG-GSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPN--AAT 117
Query: 297 YDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
Y ++ Y G DDV ++ K N + Y +I+ + + +F +
Sbjct: 118 YSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMV 177
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
N+ ++ LI A + GL A+ ++ +G P+ + + + Y Q E
Sbjct: 178 EENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYE 237
Query: 416 KGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKK 450
+ + A + E G+ KP+ E + + + K
Sbjct: 238 EALVAFN---TMNEVGS--KPTVETYNSLIQMFAK 267
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 112/266 (42%), Gaps = 27/266 (10%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+AE +++ M+++ + + Y ++++ + ++GN L EM+ K I D T++ ++
Sbjct: 340 EAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMI 399
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
A K+ + M +G+ D Y GY KAG +A + +
Sbjct: 400 HGLCQAGKVVEARKLFSEM-LSKGLKPDEVTYTALIDGYCKAGEMKEAFS---------L 449
Query: 290 HNKFSR--------AYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVYNRGYICVIS 336
HN+ Y ++ CG D + K + N+ YN +I+
Sbjct: 450 HNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYN----ALIN 505
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
L K +E A K+ EE + D ++DAYC+ G + KA L+ +G +P
Sbjct: 506 GLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQP 565
Query: 397 NVRTWYLMATGYLQNNQSEKGVEAMK 422
+ T+ ++ G+ + E G +K
Sbjct: 566 TIVTFNVLMNGFCMSGMLEDGERLIK 591
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 119/260 (45%), Gaps = 9/260 (3%)
Query: 168 AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSI 227
++A ++ QM RG V + Y+ +++ Y Q K+ LM E++ KG+ ++YT++
Sbjct: 268 VKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNS 327
Query: 228 LLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG---LSDKALAVLRKS 284
++S ++++ +M+ R + D VY T SG+ K+G + K +++
Sbjct: 328 IISFLCKTGRVVEAEQVLRVMKNQR-IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRK 386
Query: 285 EVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDG 343
+++ F Y +I G + +++ + LK Y +I K
Sbjct: 387 KIV---PDFV-TYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGE 442
Query: 344 MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYL 403
M+ A + + + L ++ L+D C+ G + A L+++ +G +PNV T+
Sbjct: 443 MKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNA 502
Query: 404 MATGYLQNNQSEKGVEAMKK 423
+ G + E+ V+ M++
Sbjct: 503 LINGLCKVGNIEQAVKLMEE 522
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 22/263 (8%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ ++ + G+ T+ YN ++++ Q G K+ SL+ +ME +G D ++S+++
Sbjct: 239 VFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYC 298
Query: 234 AASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLR--KSEVLMM 289
E + K++ +ME +G+ + Y + S K G +A VLR K++ +
Sbjct: 299 QV---EQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFP 355
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAE 348
N Y +I+ + GN +++ K+ V + Y +I L + + A
Sbjct: 356 DNV---VYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEAR 412
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
K+F E S+ L D LID YC+ G + +A +L + +G PNV T+ + G
Sbjct: 413 KLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGL 472
Query: 409 -----------LQNNQSEKGVEA 420
L + SEKG++
Sbjct: 473 CKCGEVDIANELLHEMSEKGLQP 495
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y AL++ Y A ++A + QM ++GL + Y ++++ + G + L+HEM
Sbjct: 430 YTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMS 489
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
EKG+ + T++ L++ + E K++ M+ G D Y T Y K G
Sbjct: 490 EKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDL-AGFFPDTITYTTIMDAYCKMGEM 548
Query: 275 DKALAVLR 282
KA +LR
Sbjct: 549 AKAHELLR 556
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
FDG+ +A ++F E+ +C + N ++ C+ G + +A +L+ + + RG P+V +
Sbjct: 230 FDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVS 289
Query: 401 WYLMATGYLQNNQSEKGVEAMKKALVLLEAGTR--WKPSKECLAACLGYYKKERDIEGAD 458
+ ++ GY Q VE + K L L+E R KP++ + + + K + A+
Sbjct: 290 YSVIVDGYCQ-------VEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAE 342
Query: 459 YFIKLLTGKEIISADL 474
++++ + I ++
Sbjct: 343 QVLRVMKNQRIFPDNV 358
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 139/367 (37%), Gaps = 45/367 (12%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P + +++ E A +++M R + +++ + G + L
Sbjct: 421 PGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWF 480
Query: 212 EMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
+ EKG + T + L+ C + E + + M+E RG VLD Y T SG K
Sbjct: 481 RLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLE--RGFVLDKITYNTLISGCCK 538
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-R 329
G ++ LR V + Y+ +I G D+ + +W K V N
Sbjct: 539 EGKVEEGFK-LRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVY 597
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG------------ 377
Y +I K D +E EK+F E ++NL + + N LI AYCR G
Sbjct: 598 TYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM 657
Query: 378 --------------LLH---------KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
L+H A+ LI + + G PNV + + GY + Q
Sbjct: 658 RSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQM 717
Query: 415 EKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADL 474
+K V +++ + P+K + Y K D++ A + + GK I+ +
Sbjct: 718 DKVVNVLQEM-----SSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTV 772
Query: 475 QDRLLNN 481
+L N
Sbjct: 773 TYNVLTN 779
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 131/325 (40%), Gaps = 33/325 (10%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N + +A ++++ ++G + YN++++ Y + GN + +M
Sbjct: 319 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMV 378
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
KGI+ + T + ++ E + I+ M RG ++ + T
Sbjct: 379 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM-LSRGFSINPGAFTTIIHWLCMNSRF 437
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAA--C--GNKDDVLRVWKR-----YKQNLK 325
+ AL LR+ +++ N R D ++T C G D + +W R + NL
Sbjct: 438 ESALRFLRE---MLLRNM--RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLV 492
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
N +I L K M+ A ++ ++ R D N LI C+ G + + L
Sbjct: 493 TTN----ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKL 548
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV----EAMKKALVLLEAGTRWKPSKECL 441
+ +G EP+ T+ L+ G + + ++ V E + LV P+
Sbjct: 549 RGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLV---------PNVYTY 599
Query: 442 AACL-GYYKKERDIEGADYFIKLLT 465
+ GY K ++ EG F +LLT
Sbjct: 600 GVMIDGYCKADKIEEGEKLFTELLT 624
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 102/252 (40%), Gaps = 40/252 (15%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ ++ +++A + +N + +P+VY +++ Y A E+ E + ++ + L
Sbjct: 571 MCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELN 630
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
++ YN+++ Y + GN + L +M KGI T+S L+ E ++
Sbjct: 631 SVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLID 690
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH-NKFSRAYDFVITQYA 305
M + G++ + Y GY K G DK + VL++ +H NK + Y +I Y+
Sbjct: 691 EMRKE-GLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKIT--YTVMIDGYS 747
Query: 306 ACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
G+ M++A K+ E + + D
Sbjct: 748 KSGD----------------------------------MKTAAKLLHEMVGKGIVPDTVT 773
Query: 366 PNHLIDAYCRRG 377
N L + +C+ G
Sbjct: 774 YNVLTNGFCKEG 785
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 127/301 (42%), Gaps = 11/301 (3%)
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRD 180
++ ++ + K++ +A S EK P+ VY L++ Y + A I M
Sbjct: 320 SVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVS 379
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
+G+ ++ NS++ + + G ++ + ++ EM +G + F+ ++ S E
Sbjct: 380 KGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFES 439
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AY 297
+ + M R + + + T G K G A+ + + ++ F
Sbjct: 440 ALRFLREMLL-RNMRPNDGLLTTLVGGLCKEGKHSDAVELWFR----LLEKGFGANLVTT 494
Query: 298 DFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWES 356
+ +I GN + +R+ K+ + V ++ Y +IS K +E K+ E
Sbjct: 495 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 554
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ + D N LI CR G L +A L + + R PNV T+ +M GY + ++ E+
Sbjct: 555 QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 614
Query: 417 G 417
G
Sbjct: 615 G 615
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 151 LPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
LP+V Y AL+ Y +K ++Q+M + I Y M++ Y ++G+ K
Sbjct: 698 LPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAK 757
Query: 209 LMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
L+HEM KGI D T+++L + C EG KI M + G+ LD Y T G
Sbjct: 758 LLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGF-KICDYM-SQEGLPLDEITYTTLVHG 815
Query: 268 Y 268
+
Sbjct: 816 W 816
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 131/338 (38%), Gaps = 23/338 (6%)
Query: 99 FSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI-- 156
F +A+ + ++ K F T L + K +E++ F + + + P VY+
Sbjct: 193 FRNAIGVFRFLANKGVFP-TVKTCTFLLSSLVKANELEKSYWVFETMRQGVS-PDVYLFS 250
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
+NA+ E A + M G+ + YN++++ + GN + +M +
Sbjct: 251 TAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKD 310
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--------DRGVVLDWTVYATAASGY 268
G++ T+S+L++ G+ K+ EA ++G + VY T GY
Sbjct: 311 GVNATLITYSVLIN---------GLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGY 361
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVY 327
K G AL + R V N S + +I + G + + + + +
Sbjct: 362 CKMGNLGDALRI-RGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSIN 420
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
+ +I L ESA + E RN+ + + L+ C+ G A L +
Sbjct: 421 PGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWF 480
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
+ +G N+ T + G + ++ V +KK L
Sbjct: 481 RLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKML 518
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y +L++ E A+ ++ +MR GL+ + Y +++ Y + G K+ +++ E
Sbjct: 667 ATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQE 726
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M I +K T+++++ + + D + K++ M +G+V D Y +G+ K G
Sbjct: 727 MSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM-VGKGIVPDTVTYNVLTNGFCKEG 785
Query: 273 LSDKALAV 280
++ +
Sbjct: 786 KIEEGFKI 793
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 106/247 (42%), Gaps = 11/247 (4%)
Query: 175 MQQMRDRGLVKKTIDYNSMMNVY---YQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
+ ++ + G+ +D +++VY ++ ++ + + KG+ T + LLS+
Sbjct: 164 LNEVGESGVAVAAVDL--LIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSS 221
Query: 232 CAAASDGEGIDKIVAMMEADR-GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH 290
A++ ++K + E R GV D +++TA + + K G + A+ + E L +
Sbjct: 222 LVKANE---LEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVS 278
Query: 291 NKFSRAYDFVITQYAACGNKDDVLRV-WKRYKQNLKVYNRGYICVISSLLKFDGMESAEK 349
Y+ +I GN D+ R K K + Y +I+ L+K + A
Sbjct: 279 PNVV-TYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANS 337
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
+ +E + + + N LID YC+ G L A + +G PN T + G+
Sbjct: 338 VLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFC 397
Query: 410 QNNQSEK 416
+ Q E+
Sbjct: 398 KIGQMEQ 404
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 151/395 (38%), Gaps = 53/395 (13%)
Query: 85 QLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNC 144
+LR I KF ++ RF Q KKS F I+ A + F
Sbjct: 27 RLRYAISKFSVFLRFFSDSQ-KQNAKKKSGF-----------------DAIDDAVALFTR 68
Query: 145 VPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
+ LPSV + +L + K A + +QM RG+ + + ++N Y G+
Sbjct: 69 LITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGH 128
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG----EGIDKIVAMMEADRGVVLDW 258
S++ + ++G + T + ++ + E D +VA +G +LD
Sbjct: 129 MGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVA-----QGFLLDE 183
Query: 259 TVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK 318
Y T +G K GL+ +A +L K M + R + VI G D L
Sbjct: 184 VTYGTLINGLCKIGLTREAFELLHK-----MEGQVVRP-NVVIYNMIVDGLCKDGLVTEA 237
Query: 319 RYKQNLKVYNRG-------YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
R + V RG Y C+I ++ + RN+ ++ N LID
Sbjct: 238 RDLYS-DVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILID 296
Query: 372 AYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAG 431
A C++G+L KA + RG P++ T+ + +GY N VEA K E G
Sbjct: 297 ALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDV---VEARKLFDTFAECG 353
Query: 432 TR---WKPSKECLAACLGYYKKERDIEGADYFIKL 463
W + +GY K R E F K+
Sbjct: 354 ITPDVWSYN----ILIIGYCKNNRIDEALSLFNKM 384
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 170/409 (41%), Gaps = 28/409 (6%)
Query: 29 YSTATGTS----TREVTISLRKGSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDME 84
Y TA S R +T S+ S + Y L MG +L ++ G L+
Sbjct: 94 YPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMG----FAFSVLGMVLKRGYQLNAI 149
Query: 85 QLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNC 144
L I+K + AL+ + + F+L ++ + K+ +A +
Sbjct: 150 TLTTIMKGLCINGEVRKALEFHDSVVAQG-FLLDEVTYGTLINGLCKIGLTREAFELLHK 208
Query: 145 VPEKLKLPSVYIALLNAYACAKSA--EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
+ ++ P+V I + K +A + + RG+ Y +++ + G
Sbjct: 209 MEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQ 268
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVY 261
++++ L+ +M ++ ++ + YT++IL+ A C G+ D M+E RG D +
Sbjct: 269 WREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIE--RGQRPDLVTF 326
Query: 262 ATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
T SGY +A + +E + + +S Y+ +I Y D+ L ++ +
Sbjct: 327 NTLMSGYCLYNDVVEARKLFDTFAECGITPDVWS--YNILIIGYCKNNRIDEALSLFNKM 384
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD------IRIPNHLIDAYC 374
N I SSL+ DG+ + +I WE + HD + N ++DA C
Sbjct: 385 NYKKLAPN---IVTYSSLI--DGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALC 439
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ L+ KA L RG PNV ++ ++ GY ++ + ++ + ++
Sbjct: 440 KIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEE 488
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I LD + K+Q +++A FN + E+ P+V Y L+N Y +K ++A + ++M R
Sbjct: 433 IMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRR 492
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
LV ++ YN +++ ++G L + M + G D T++IL A
Sbjct: 493 NLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDA 542
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 7/166 (4%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
L D + E G D+ I+I + R AL + M K L P V +D
Sbjct: 345 LFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKK---LAPNIVTYSSLID 401
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+ K I A F+ + + P+V Y +L+A + +KA + M +RGL
Sbjct: 402 GLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTP 461
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
YN ++N Y ++ + +L EM + + D T++ L+
Sbjct: 462 NVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDG 507
>gi|298714808|emb|CBJ25707.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1273
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 17/255 (6%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y A + A A ++ + A ++++M+D GL +NS+++V+ +TGN +LM EM
Sbjct: 964 TYGAAVGACAKGRNPDLARALLEEMKDLGLTPTRFCWNSIISVHSRTGNTTAAMTLMDEM 1023
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
++ + CD+ TFS ++ CA D + +++ M A G+ + Y T +AG
Sbjct: 1024 KQS-MPCDETTFSAMMHGCAQTRDWDAAGRLLEEMNA-AGLKPNDACYYTLLVAACRAG- 1080
Query: 274 SDKALAVLRKSEVLMMH-NKFSRAYDF--VITQYAACGNKDD---VLRVWKRYK-QNLKV 326
LR +E L+ K A D T AACG D LR+ + K +
Sbjct: 1081 ------ELRLAEGLIKGMRKDGAAPDLYSYTTLSAACGRFHDWRMALRLIESMKIDGIPA 1134
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
+ Y +++ + + E AE + E S+ + D +H + A+ R G KA L+
Sbjct: 1135 TKKIYAAALAACGRGEA-EIAEILLEMMRSQGVELDDVGRSHALVAFGRGGRPDKALVLM 1193
Query: 387 YKAQLRGTEPNVRTW 401
+ +G PN++ +
Sbjct: 1194 DDIREKGPPPNLQCF 1208
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 113/252 (44%), Gaps = 4/252 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ A L+A + E A ++++M+ +GL I Y S + G+ L+ +ME
Sbjct: 860 FNAALDACTKGSNPEAALALLKRMKSQGLEPDAISYQSAILACRAGGDGASAVMLLRDME 919
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
++G++ +++++ D G +++ M+A+ G+ D Y A K
Sbjct: 920 QQGLEPRDADYNLVIETVGREGDWAGALELLKSMKAE-GIAADAYTYGAAVGACAKGRNP 978
Query: 275 DKALAVLRKSEVL-MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
D A A+L + + L + +F ++ +I+ ++ GN + + KQ++ +
Sbjct: 979 DLARALLEEMKDLGLTPTRFC--WNSIISVHSRTGNTTAAMTLMDEMKQSMPCDETTFSA 1036
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
++ + ++A ++ EE + L + L+ A CR G L AE LI + G
Sbjct: 1037 MMHGCAQTRDWDAAGRLLEEMNAAGLKPNDACYYTLLVAACRAGELRLAEGLIKGMRKDG 1096
Query: 394 TEPNVRTWYLMA 405
P++ ++ ++
Sbjct: 1097 AAPDLYSYTTLS 1108
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 112/283 (39%), Gaps = 28/283 (9%)
Query: 148 KLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLD 207
+LK S A++ C K+ E + + +RG+V + +N+ M+ TG K
Sbjct: 457 RLKRQSYAWAVVAYKRCGKAKEALDSALS-FSERGIVMPVVGWNAAMHAASVTGEPGKAL 515
Query: 208 SLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
L+ E + KG+ + T++ + ACA A+ A + V+L + A
Sbjct: 516 ELLEEAKSKGVKPTEVTYATAIGACAKATTN-------VKANARKAVLLLEEMEAAGLEP 568
Query: 268 YVKAGLSDKALAVLRKSE---------VLMMHNK---FSRAYDFVITQYAACG---NKDD 312
Y A AL VL SE M N S +Y + A G N
Sbjct: 569 YPPA--HQAALTVLAASEGHRAAMDLLAKMRENGTRLTSASYSPALKSAAQVGDWRNAIA 626
Query: 313 VLRVWKRYKQNLKVYNRGYIC---VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
++ V R K +C +++ K E A ++ ++ L ++
Sbjct: 627 LIDVMTRASVTDKDAGPDVVCFNYAMTACAKAGECELAHRVLSRIQACGLAANLVSYGIC 686
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
+DAY + GL KA L+ +A+ +G PN+ T+ G N+
Sbjct: 687 MDAYAKAGLWEKALELLAEARSQGLSPNIVTFTTAVRGLACND 729
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 99/252 (39%), Gaps = 42/252 (16%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P + A L A ++ A ++ +MR+ G + Y+ + Q G+++ +L+
Sbjct: 570 PPAHQAALTVLAASEGHRAAMDLLAKMRENGTRLTSASYSPALKSAAQVGDWRNAIALID 629
Query: 212 EME-----EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAAS 266
M +K D F+ ++ACA A + E ++++ ++A G+ + Y
Sbjct: 630 VMTRASVTDKDAGPDVVCFNYAMTACAKAGECELAHRVLSRIQA-CGLAANLVSYGICMD 688
Query: 267 GYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKV 326
Y KAGL +KAL +L ++ S+ I +
Sbjct: 689 AYAKAGLWEKALELLAEAR--------SQGLSPNIVTF--------------------TT 720
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
RG C + + AE+I +SR + + LI R G +H+A +
Sbjct: 721 AVRGLAC--------NDWDKAEEILSMMKSRAIKPNEVTYTELISICGRSGDVHQALAQL 772
Query: 387 YKAQLRGTEPNV 398
+A+ G PN+
Sbjct: 773 ERARRNGLSPNL 784
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 164 CAKSAEKAEIIMQQMRDR--GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG---I 218
C +S + + + Q R R GL I+YN+ ++V +TG + +L+ +M+ G +
Sbjct: 759 CGRSGDVHQALAQLERARRNGLSPNLINYNACVDVCAKTGEVDRALALLEQMQTSGDPAL 818
Query: 219 DCDKYTFSILLSACAAASD 237
D TF+ +++ACA A D
Sbjct: 819 TPDLVTFNSVINACAKAGD 837
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 154 VYIALLNAYACAKS-AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+Y A L AC + AE AEI+++ MR +G+ + + + + + G K LM +
Sbjct: 1138 IYAAAL--AACGRGEAEIAEILLEMMRSQGVELDDVGRSHALVAFGRGGRPDKALVLMDD 1195
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMM 248
+ EKG + F+ + ACA A D +G ++A M
Sbjct: 1196 IREKGPPPNLQCFNGAIEACALADDIDGGISLLAEM 1231
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 110/253 (43%), Gaps = 11/253 (4%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
++++ ++ +KAE +++QM D+ ++ YNS+++ Y +G K+ ++ +M
Sbjct: 161 SIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRH 220
Query: 217 GIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
G + T+S+L+ C E + + +M+++ RG + Y GY G
Sbjct: 221 GQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQS-RGNP-NVATYGGLLHGYATKG--- 275
Query: 276 KALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGY 331
L + LM+ N ++ I Y CG D+ + + + + Q L Y
Sbjct: 276 -DLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISY 334
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+I L K +++A F + L DI + +LI + G KAE L Y+
Sbjct: 335 GTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMD 394
Query: 392 RGTEPNVRTWYLM 404
RG P V + M
Sbjct: 395 RGIRPTVVVFTTM 407
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 132/301 (43%), Gaps = 16/301 (5%)
Query: 119 PADVAIR---LDLIAKVQGIEQAASYFNCVPEKLKLP--SVYIALLNAYACAKSAEKAEI 173
P DV +D + KVQ +++A + +K +P + Y +L++ Y + ++A
Sbjct: 153 PPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVR 212
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
I++QM G + Y+ +++ + G + + +++ M + + + T+ LL A
Sbjct: 213 ILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYA 272
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNK 292
D ++ ++ +M GV D ++ YVK G D+A+ K + +M +
Sbjct: 273 TKGDLVEMNNLIDLM-VQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDI 331
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGM----ESAE 348
S Y +I G D + ++ Q + I V ++L+ M E AE
Sbjct: 332 IS--YGTMIDGLCKIGRLDAAM---SQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAE 386
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
++F E R + + + +ID + G + +A+TL + +PNV ++ + GY
Sbjct: 387 ELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGY 446
Query: 409 L 409
Sbjct: 447 F 447
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y VI K D + A +F E R + D+ N +ID C+ + KAE ++ +
Sbjct: 124 YTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMF 183
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ P+ T+ + GYL + Q ++ V +K+
Sbjct: 184 DKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQ 216
>gi|115443739|ref|NP_001045649.1| Os02g0110400 [Oryza sativa Japonica Group]
gi|41052925|dbj|BAD07836.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535180|dbj|BAF07563.1| Os02g0110400 [Oryza sativa Japonica Group]
gi|215706484|dbj|BAG93340.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622028|gb|EEE56160.1| hypothetical protein OsJ_05062 [Oryza sativa Japonica Group]
Length = 747
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 116/297 (39%), Gaps = 19/297 (6%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y LLNA+ A E A + +M G + ++ YN M+ Y + G ++ L E
Sbjct: 278 TTYNTLLNAWVRAGDLESARKVFDEMPGAGFAQNSVSYNVMIKGYVEAGKVEEAVGLFSE 337
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEG--IDKIVAM--MEADRGVVLDWTVYATAASGY 268
M EKG+ + TF+ L+ D EG ++ AM M R D +V+ +
Sbjct: 338 MGEKGLRLSEKTFAALMPGLC---DDEGRVVEARKAMDDMAERRLTPKDKSVFLRLVTTL 394
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-------- 320
+AG D AL V +KS R Y ++ A G D + V
Sbjct: 395 CRAGDLDGALDVHQKSGQFKHVLVDPRQYGVLMESLCAGGKCDGAVEVMDELLEKGTLLS 454
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
++ + Y VI L AE F + + + D N LI + + G+
Sbjct: 455 PKSPVLEGPAYNPVIEYLCSNGNTSKAETFFRQLMKKGV-DDKAAFNSLIRGHAKEGVPE 513
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPS 437
A+ ++ RG + + L+ +L+ N+ A+ ++E G PS
Sbjct: 514 AAQEILAIMTRRGVRTDPESHALLVDSFLKKNEPADAKTALDS---MMEQGHVPSPS 567
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 145/352 (41%), Gaps = 26/352 (7%)
Query: 104 QISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQA-------ASYFNCVPEKLKLPSVYI 156
Q + +++ F PA ++ + ++A + + A F+ PE+ +
Sbjct: 121 QFFRFAYRRAGFSPEPATFSLLIPILASHRMLNHARCILLDTMPSFSIAPEE----ATVA 176
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
AL+ AY A +++ + + M D G+ + + YN+++ G + + M
Sbjct: 177 ALIAAYGKANIPQESVKLFRLMPDLGIARTALSYNAVLKAILCRGREAMARRIYNAMIAD 236
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
+ D T++ L+ E ++ M+ D GV D T Y T + +V+AG +
Sbjct: 237 AVTPDLSTYNTLIWGFGLCKKMEAALRVFGDMK-DHGVTPDVTTYNTLLNAWVRAGDLES 295
Query: 277 ALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYI 332
A V + M F++ +Y+ +I Y G ++ + ++ ++ L++ + +
Sbjct: 296 ARKVFDE----MPGAGFAQNSVSYNVMIKGYVEAGKVEEAVGLFSEMGEKGLRLSEKTFA 351
Query: 333 CVISSLLKFDG-MESAEKIFEEWESRNLC-HDIRIPNHLIDAYCRRGLLHKAETLIYKA- 389
++ L +G + A K ++ R L D + L+ CR G L A + K+
Sbjct: 352 ALMPGLCDDEGRVVEARKAMDDMAERRLTPKDKSVFLRLVTTLCRAGDLDGALDVHQKSG 411
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECL 441
Q + + R + ++ + + VE M + LLE GT P L
Sbjct: 412 QFKHVLVDPRQYGVLMESLCAGGKCDGAVEVMDE---LLEKGTLLSPKSPVL 460
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 122/306 (39%), Gaps = 29/306 (9%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y L+ + K E A + M+D G+ YN+++N + + G+ + + E
Sbjct: 243 STYNTLIWGFGLCKKMEAALRVFGDMKDHGVTPDVTTYNTLLNAWVRAGDLESARKVFDE 302
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M G + ++++++ A E + + M ++G+ L +A + G
Sbjct: 303 MPGAGFAQNSVSYNVMIKGYVEAGKVEEAVGLFSEM-GEKGLRLSEKTFAA-----LMPG 356
Query: 273 LSDKALAVL--RKSEVLMMHNKFS----RAYDFVITQYAACGNKDDVLRVWKRYKQ--NL 324
L D V+ RK+ M + + + ++T G+ D L V ++ Q ++
Sbjct: 357 LCDDEGRVVEARKAMDDMAERRLTPKDKSVFLRLVTTLCRAGDLDGALDVHQKSGQFKHV 416
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP-------NHLIDAYCRRG 377
V R Y ++ SL + A ++ +E + + P N +I+ C G
Sbjct: 417 LVDPRQYGVLMESLCAGGKCDGAVEVMDELLEKGTLLSPKSPVLEGPAYNPVIEYLCSNG 476
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV-EAMKKAL-VLLEAGTRWK 435
KAET + +G + A L +++GV EA ++ L ++ G R
Sbjct: 477 NTSKAETFFRQLMKKGVDDKA------AFNSLIRGHAKEGVPEAAQEILAIMTRRGVRTD 530
Query: 436 PSKECL 441
P L
Sbjct: 531 PESHAL 536
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 131/300 (43%), Gaps = 17/300 (5%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-C 232
++M G + + YN+M++ Y + + + M KG++ + TF+++++ C
Sbjct: 5 FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
E + +V M + +G V D Y T +GY K G +AL + + M+ N
Sbjct: 65 RDGRLKETSEVLVEM--SRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAE----MVRNG 118
Query: 293 FSR---AYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAE 348
S Y +I GN + + + + + + L R Y +I+ + ++ A
Sbjct: 119 LSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAY 178
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
++ E I N LI+ +C G + +A L+ +G P+V ++ + +G+
Sbjct: 179 RVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGF 238
Query: 409 LQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACL-GYYKKERDIEGADYFIKLLTGK 467
+N + ++ + MK ++ G P ++ + G ++ R E D F ++LT K
Sbjct: 239 ARNQELDRAFQ-MKVEMI----GKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIK 293
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
Query: 99 FSHALQISMWMTKKSNFVLTPADVAIR--LDLIAKVQGIEQAASYFNCVPEKLKLPS--V 154
F AL + M + L+P V ++ + K + +A +F+ + + P+
Sbjct: 104 FHQALVLHAEMVRNG---LSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERT 160
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ++N +A ++A ++ +M G + + YN+++N + G ++ L+ +M
Sbjct: 161 YTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMV 220
Query: 215 EKGIDCDKYTFSILLSACA 233
KG+ D ++S ++S A
Sbjct: 221 GKGVLPDVVSYSTIISGFA 239
>gi|297733647|emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 139/309 (44%), Gaps = 11/309 (3%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
AL+ ++ +A II +M +G+ I YN++M+ Y ++ ++ + L EM+ K
Sbjct: 318 ALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAK 377
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA-GLSD 275
G+ T++IL+ A + E I+ ++ M+ D G+ + Y S Y + +SD
Sbjct: 378 GVMPTSATYNILMDAYSRRMQPEIIENLLLEMQ-DMGLEPNVKSYTCLISAYGRQKKMSD 436
Query: 276 KAL-AVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYIC 333
A A LR +V + S +Y +I Y+ G + ++ K + +K Y
Sbjct: 437 MAADAFLRMKKVGI--KPTSHSYTALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTA 494
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
++ + + ++ KI++ S + N L+D + ++G +A +I++ G
Sbjct: 495 LLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEFGKIG 554
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERD 453
+P V T+ ++ Y + Q + + +K+ L KP + + Y + RD
Sbjct: 555 FQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTSL-----NLKPDSITYSTMIYAYVRVRD 609
Query: 454 IEGADYFIK 462
+ A ++ K
Sbjct: 610 FKRAFFYHK 618
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFS--RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
+AG+ D + +LR L +F R Y+ I+ ++CG DD +V+ + N
Sbjct: 219 RAGMGDDLMVLLRN---LPKTRQFRDVRIYNSAISGLSSCGRYDDAWKVYDEMETNNIRP 275
Query: 328 NRGYICVISSLLKFDGMES--AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+ ++ ++++ DG + A + F+ + + + + LI ++C GL K E L
Sbjct: 276 DHVTCSIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEVLGALIKSFCDEGL--KNEAL 333
Query: 386 IYKAQL--RGTEPNVRTWYLMATGYLQNNQSEKG 417
I ++++ +G N + + Y ++N+ E+
Sbjct: 334 IIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEA 367
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 121/272 (44%), Gaps = 5/272 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+ L+N ++A + +M R + T+ + +++V + G + + M
Sbjct: 158 TFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETM 217
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
EKG++ + YT++ L++ + K+ +M +G Y+ +GY K+
Sbjct: 218 TEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIM-VGKGCAPSVHSYSILINGYCKSRR 276
Query: 274 SDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGY 331
D+A A+L + SE ++ N + Y+ ++ + + ++K+ + + N R Y
Sbjct: 277 IDEAKALLTQMSEKELIPNTVT--YNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTY 334
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
++ L K +E A K+ + R L DI + N LI G L A+ L K
Sbjct: 335 SILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFA 394
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G P+VRT+ +M G L+ S++ + +K
Sbjct: 395 NGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRK 426
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 123/300 (41%), Gaps = 40/300 (13%)
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRD 180
I +D++ K + +A F + EK P++Y AL+N Y A + + M
Sbjct: 195 TILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVG 254
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGE 239
+G Y+ ++N Y ++ + +L+ +M EK + + T++ L+ C A+S E
Sbjct: 255 KGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLE 314
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
+ M + G++ + Y+ G K G ++AL +L +
Sbjct: 315 AQELFKKMCSS--GMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQ-------------- 358
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
++ + ++ +YN +I + +E A+++F + + +
Sbjct: 359 -----------------ERKLEPDIVLYN----ILIQGMFIAGKLEVAKELFSKLFANGI 397
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+R N +I + GL +A L K + G P+ ++ ++ G+LQN ++
Sbjct: 398 RPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQ 457
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 318 KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
K +K ++ + + +I+ L ++ A ++F E R+ + L+D C++G
Sbjct: 146 KMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKG 205
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGY---LQNNQSEKGVEAMKKALVLLEAGTRW 434
++ +A + +G EPN+ T+ + GY L+ N + K E M G
Sbjct: 206 MVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIM--------VGKGC 257
Query: 435 KPSKECLAACLGYYKKERDIEGADYFIKLLTGKEII 470
PS + + Y K R I+ A + ++ KE+I
Sbjct: 258 APSVHSYSILINGYCKSRRIDEAKALLTQMSEKELI 293
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 137/306 (44%), Gaps = 15/306 (4%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+++ +K + ++ A F+ V E+ + + L++ YAC E + ++Q+M+ G
Sbjct: 319 VEMYSKCEDLKAAQLAFDGVTERDT--ATWNVLISGYACCNQLENIQNLIQKMKGDGFEP 376
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA-AASDGEGIDKI 244
+N +++ + + G+ + L EM+ + D YT I+L ACA A+ G K
Sbjct: 377 NVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARG--KQ 434
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
V +G LD + A Y K G A+ V + + N + + ++T Y
Sbjct: 435 VHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNR-----ISNPNLVSQNAMLTAY 489
Query: 305 AACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
A G+ D+ + +++ N + + ++ V+SS + +E+ + F+ N+ +
Sbjct: 490 AMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSL 549
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ ++D R G L +A L+ K + P+ W + G + E G E +
Sbjct: 550 KHYTCIVDLLSRAGRLDEAYELVKKIPRK---PDSVMWGALLGGCVIWGNVELG-EIAAE 605
Query: 424 ALVLLE 429
+L+ LE
Sbjct: 606 SLIELE 611
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 139/353 (39%), Gaps = 64/353 (18%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM- 213
Y ++ Y + EKA+ + QM G K TI +NSM++ Y + + S+ ++
Sbjct: 211 YNTMIVGYCENGNVEKAKELFDQMELVG--KDTISWNSMISGYADNLLFDEALSMFRDLL 268
Query: 214 EEKGIDCDKYTFSILLSACA-AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
E+GI+ D +T +L+ACA AS G K V RG L W + A + +
Sbjct: 269 MEEGIEADSFTLGSVLAACADMASLRRG--KEVHAQAVVRG--LHWNTFVGGALVEMYSK 324
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-----YKQNLKVY 327
D A L V + + ++ +I+ YA C +++ + ++ ++ N+ +
Sbjct: 325 CEDLKAAQLAFDGVT---ERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTW 381
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNL---------------------------C 360
N +IS ++ E A ++F E ++ +L
Sbjct: 382 NG----IISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHA 437
Query: 361 HDIR--------IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
H IR I L+D Y + G + K +Y R + PN+ + M T Y +
Sbjct: 438 HSIRQGYELDVHIGAALVDMYAKCGSI-KHAMQVYN---RISNPNLVSQNAMLTAYAMHG 493
Query: 413 QSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLT 465
++G+ + L G ++P + L +E F L+T
Sbjct: 494 HGDEGIALFRNML-----GNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMT 541
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 123/301 (40%), Gaps = 30/301 (9%)
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
+LD+I + + + C P ++ +LL+ Y AE+A ++ +M RG
Sbjct: 260 KLDMINEAKEVIAQMRERGCEPGLF----IFTSLLSYYLSKGRAEEAYQVLTEMTARGCA 315
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI 244
I Y S++++ + TG + + M EKG D T+ ++ + + E +I
Sbjct: 316 PDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEI 375
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV--------LRKSEV---LMMHNKF 293
+ +M A GV D Y + GYVK D+A V ++ + V ++MH F
Sbjct: 376 LELM-AKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLF 434
Query: 294 SRAYDFVITQYAACGNKDDVLRVWKRY--KQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
G D ++K K+ + Y +I L K + A F
Sbjct: 435 KD------------GKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQF 482
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
+E R + + LI + + G + +A+ L+ G P+V+ + + TG + +
Sbjct: 483 QEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDS 542
Query: 412 N 412
+
Sbjct: 543 S 543
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 99/258 (38%), Gaps = 9/258 (3%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE-M 213
Y +++ A ++A M D G I + ++++ + + G + L+++ +
Sbjct: 10 YNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQAL 69
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ D YT S++ C A G + V + LD Y T G +
Sbjct: 70 KRFRPDVFLYT-SVIHGYCKAGDLDTGYFRAVTPKAS-----LDVISYTTVIKGLADSKR 123
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-YI 332
D+A + + + AY VI G +D L+ ++ + V R Y
Sbjct: 124 IDEACELFEELKTAGCSPNVV-AYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYT 182
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
VI L K + A K+FE+ + D LID + + + +A L+ +
Sbjct: 183 VVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 242
Query: 393 GTEPNVRTWYLMATGYLQ 410
G EP T+ + G+ +
Sbjct: 243 GPEPTAVTYGSIVHGFCK 260
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 153/365 (41%), Gaps = 22/365 (6%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV---AIRL 126
+LD+ E+G D + I +++ A+++ M + TP DV + +
Sbjct: 173 VLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARG----TPPDVLTYSSAI 228
Query: 127 DLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSA--EKAEIIMQQMRDRGLV 184
AKV ++A + + P+V + AC K E A ++++M GL
Sbjct: 229 AACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLA 288
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI 244
I Y+++++ + G ++ L+ EM KG+ + T+SI++ ACA E +
Sbjct: 289 PDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVAL 348
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY 304
+ M+ + GV D Y++ S K G ++A+ +LR+ + M A + I
Sbjct: 349 LREMQ-ENGVAPDVITYSSTISACAKKGQWEEAVGLLRE---MPMEGVTPNAISYGIV-I 403
Query: 305 AACGNKD------DVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
+AC + D+L+ + + V N Y I + + E A + E +
Sbjct: 404 SACAKRGRWREAIDLLQEMQAHGVPPDVIN--YSAAIDACAQASRWEQALWLLREMPATG 461
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
L ++ N IDA + G A L+ + G P+V T+ + Q E+ +
Sbjct: 462 LTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEAL 521
Query: 419 EAMKK 423
+ ++
Sbjct: 522 DLFRE 526
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 121/280 (43%), Gaps = 13/280 (4%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSA--EKAEIIMQQMRDRGL 183
+D AK E A +P K + ++ + ACAK E+A ++++M++ G+
Sbjct: 298 IDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGV 357
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG-EGID 242
I Y+S ++ + G +++ L+ EM +G+ + ++ I++SACA E ID
Sbjct: 358 APDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAID 417
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL-MMHNKFSRAYDFVI 301
+ M GV D Y+ A +A ++AL +LR+ + N S Y+ I
Sbjct: 418 LLQEMQA--HGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVIS--YNSAI 473
Query: 302 TQYAACGNKD---DVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
A G ++LR + V Y VI+S E A +F E + +
Sbjct: 474 DACAKTGRSKIAVELLREMPAHGLAPDVIT--YSAVIASCAMGRQWEEALDLFREMQRQG 531
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
+ D+ N I+A + G +A ++ + G P+
Sbjct: 532 ITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDA 571
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 3/230 (1%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
KA ++ +M+++G+ + +Y+S + +++ L+ M +G D T+S +
Sbjct: 169 KALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAI 228
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
+ACA S + ++ M+ +GV + VY+ A S K G + A+ +L++ + +
Sbjct: 229 AACAKVSRWKEAVGLLRSMKG-QGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGL 287
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAE 348
Y VI A G + R+ V N Y VI + K+ E A
Sbjct: 288 APDVI-TYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAV 346
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
+ E + + D+ + I A ++G +A L+ + + G PN
Sbjct: 347 ALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNA 396
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 15/182 (8%)
Query: 136 EQAASYFNCVPEKLKLPSVYIALLNAYACAKSA--EKAEIIMQQMRDRGLVKKTIDYNSM 193
E+A F + + P V ACA+ E+A ++ +M GLV I Y +
Sbjct: 518 EEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTA 577
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA-DR 252
++ + +K++ L+ EM G+ D ++ +SAC+ DG + +V + +
Sbjct: 578 IDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSV--DGLWKEALVLLRDMLAV 635
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH---NKFSRAYDFVITQYAACGN 309
G+ D Y +A + K G +A +LR+ + N F+ A D ACGN
Sbjct: 636 GLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAID-------ACGN 688
Query: 310 KD 311
D
Sbjct: 689 GD 690
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 36/225 (16%)
Query: 199 QTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDW 258
Q G+++K ++ M+E+G+ D +S ++AC A E +++A M A RG D
Sbjct: 163 QYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAA-RGTPPDV 221
Query: 259 TVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK 318
Y++A + K +A+ +LR + +
Sbjct: 222 LTYSSAIAACAKVSRWKEAVGLLRSMKG-------------------------------Q 250
Query: 319 RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
K N+ VY+ IS+ K E+A + +E + L D+ + +IDA +RG
Sbjct: 251 GVKPNVIVYS----AAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQ 306
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
A L+ + +G N+ T+ ++ + Q E+ V +++
Sbjct: 307 WEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLRE 351
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 113/295 (38%), Gaps = 55/295 (18%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y A ++A A A E+A ++++M GL I YNS ++ +TG K L+ EM
Sbjct: 434 YSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMP 493
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
G+ D T+S ++++CA E + M+ +G+ D TA + + G
Sbjct: 494 AHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQ-RQGITPDVVSCNTAINACAQGGWW 552
Query: 275 DKALAVLRKSEVL-MMHNKFSRAYDFVITQYAACGNKD------DVLR------------ 315
++AL VL + + ++ + S Y I AC D D+LR
Sbjct: 553 EEALDVLGEMPTMGLVPDAIS--YRTAID---ACAKGDRWKEIIDLLREMSTVGLTPDAI 607
Query: 316 -------------VWKR------------YKQNLKVYNRGYICVISSLLKFDGMESAEKI 350
+WK ++ YN I++ K + A +
Sbjct: 608 SYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNS----AINACAKGGRWKEATVL 663
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
+ + L D+ N IDA A ++++ + G PN T YL A
Sbjct: 664 LRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEAT-YLTA 717
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 29/272 (10%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQ-QMRDRGLVK 185
+ K I+ A F + E+ P+ V L++A+ C + A + ++ +M RG+
Sbjct: 322 LCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAH-CKEGDVTAGLELRWEMATRGVKA 380
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
+ YN+++N + + + K + ++ EM + G+ DK T++ L+ C +GE +D +
Sbjct: 381 DLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGC--CKEGE-LDTAM 437
Query: 246 AMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFV 300
M + +D GV LD Y SG KAG S A +L + MM + Y V
Sbjct: 438 EMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCE----MMEAGLQPDNTTYTMV 493
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNRG-------YICVISSLLKFDGMESAEKIFEE 353
I + C N D V +K ++ N+G Y V++ M++A+ +
Sbjct: 494 IDAF--CKNGD----VKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNA 547
Query: 354 WESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+ +C + N L+D +C+ G + E L
Sbjct: 548 MLNIGVCPNDITYNILLDGHCKHGKVRDTEEL 579
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 120/278 (43%), Gaps = 10/278 (3%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P VY A + + A + ++M +RGL T+ ++++ + + G+ L
Sbjct: 310 PDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLEL 369
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
EM +G+ D ++ L++ D + + IV M D G+ D Y T G
Sbjct: 370 RWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKD-GLKPDKVTYTTLIDGCC 428
Query: 270 KAGLSDKALAVLRK--SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-KRYKQNLKV 326
K G D A+ + ++ E + + + Y +I+ + G D R+ + + L+
Sbjct: 429 KEGELDTAMEMKQEMSDEGVALDDV---TYTALISGLSKAGRSVDAERILCEMMEAGLQP 485
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
N Y VI + K +++ K +E +++ I N +++ +C G + A+ L+
Sbjct: 486 DNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLL 545
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
G PN T+ ++ G+ ++ + + E +K A
Sbjct: 546 NAMLNIGVCPNDITYNILLDGHCKHGKV-RDTEELKSA 582
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 113/295 (38%), Gaps = 16/295 (5%)
Query: 166 KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF 225
S +A + D G+ + +N +M ++G ++ EM +G+ TF
Sbjct: 221 PSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTF 280
Query: 226 SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
+ L+S ASD + + +M A G+ D Y G K G A+ + +
Sbjct: 281 NTLMSGMCKASDLNNANALRGLM-AKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEE-- 337
Query: 286 VLMMHNKFSRAYDFVITQY--AACGNKDDVLRV---WKRYKQNLKVYNRGYICVISSLLK 340
M + V+T A C D + W+ + +K Y +++ +
Sbjct: 338 ---MCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCR 394
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
M++A I EE L D LID C+ G L A + + G + T
Sbjct: 395 VRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVT 454
Query: 401 WYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIE 455
+ + +G +++ + V+A + ++EAG +P + + K D++
Sbjct: 455 YTALISGL---SKAGRSVDAERILCEMMEAG--LQPDNTTYTMVIDAFCKNGDVK 504
>gi|297734415|emb|CBI15662.3| unnamed protein product [Vitis vinifera]
Length = 657
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 120/275 (43%), Gaps = 21/275 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V AL++ Y+ S E A+ + QM + K T+ +NS++ Y G ++ S+ +EM
Sbjct: 269 VACALIDMYSKCGSIEDAQCVFDQMPE----KTTVGWNSIIAGYALHGYSEEALSMYYEM 324
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ G+ D +TFSI++ CA + E + A + G LD Y K G
Sbjct: 325 RDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGL-VRHGFGLDIVANTALVDLYSKWGR 383
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
+ A V MM +K +++ +I Y G + + +++R V N
Sbjct: 384 IEDAKHVFD-----MMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFL 438
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH-----LIDAYCRRGLLHKAETLIYK 388
+ S + G+ +++ +E +ES + H I+ P +I+ R GLL +A LI
Sbjct: 439 AVLSACSYSGL--SDRGWEIFESMSRDHKIK-PRAMHYACMIELLGREGLLDEAFALIKD 495
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
A + P V W + T + E G A +K
Sbjct: 496 APFK---PTVNMWAALLTACRVHKNFELGKFAAEK 527
>gi|242065966|ref|XP_002454272.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
gi|241934103|gb|EES07248.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
Length = 519
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 156/358 (43%), Gaps = 17/358 (4%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
+ +VP+LD+ V R + E ++ ++ + L++ WM K+ +V +
Sbjct: 72 ERLVPVLDRHV---RGVRTEHCFLLFEELGRRDAWLQCLEVFRWMQKQRWYVADNGIYSK 128
Query: 125 RLDLIAKVQGIEQAASYFN------CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQM 178
+ ++ + I A F+ C P+ S+ A L++ +K+ KA ++M
Sbjct: 129 LISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKSKALAKALGYFEKM 188
Query: 179 RDRGLVKKTI-DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
+ + TI YN ++ + Q G+ K++D L +++E + D YT++ +L A
Sbjct: 189 KCIARCQPTIVTYNILLRAFAQAGDTKQVDILFKDLDESVVSPDIYTYNGVLDAYGKNGM 248
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY 297
+ ++ ++ M++ + D + Y + + DK V KS + +
Sbjct: 249 IKEMESVLLRMKS-KQCRPDVITFNILIDSYGRKQIFDKMEQVF-KSLLRSKERPTHPTF 306
Query: 298 DFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYI---CVISSLLKFDGMESAEKIFEEW 354
+ +IT Y ++ V K+ ++ Y Y+ C+I D + A ++F+E
Sbjct: 307 NSMITNYGKARLREKAEYVVKKMEE--LGYKPNYVTQECLIMMYAHCDCVSKARQVFDEL 364
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
S + N ++DAYC GL +A+ L+ A + PN T+ L+ Y + N
Sbjct: 365 VSSQNKVQLSSLNSMLDAYCMNGLHTEADQLLDTALQKCVVPNGSTYKLLYKAYTRAN 422
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 134/318 (42%), Gaps = 15/318 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+ ++N Y AK + + +M+ G Y +++N + + G +K + + EM
Sbjct: 282 TFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEM 341
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
++ G + D Y ++ L+ A + A +G +I ++M+ G D Y Y +AGL
Sbjct: 342 QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQ-HMGCEPDRASYNILVDAYGRAGL 400
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYI 332
+ A AV + + M +++ ++ +A GN V + +K L
Sbjct: 401 HEDAEAVFEELKQRGMSPTM-KSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALN 459
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
++++ + ++ E++F E R D+ N ++AY R G + + E R
Sbjct: 460 AMLNAYARAGRLDDMERLFAAMERRGDA-DVGTYNVAVNAYGRAGYVGRMEAAFAAVAAR 518
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKG---VEAMKKALVLLEAGTRWKPSKECLAACLGYYK 449
G +V TW Y + + + VE M A +AGT ++ LAAC
Sbjct: 519 GLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAGCYPDAGT----ARVLLAAC----S 570
Query: 450 KERDIEGADYFIKLLTGK 467
ER +E ++ + K
Sbjct: 571 DERQVEQVTAIVRSMHKK 588
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 135/320 (42%), Gaps = 5/320 (1%)
Query: 92 KFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKL 151
+FR+ K++ + + W+ +S+F + ++ K + + +A S + + E +
Sbjct: 148 QFRMNKKWDLIIPVCEWILYRSSFRPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCV 207
Query: 152 PS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+ Y LL AY A S +AE ++ +MR+ G+ YN+ ++ + +K +
Sbjct: 208 PTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEV 267
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
M+ + + TF+++++ A K+ M++ G + Y + +
Sbjct: 268 YQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSI-GCKPNICTYTALVNAFA 326
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
+ GL +KA V + + H AY+ ++ Y+ G ++ + +R
Sbjct: 327 REGLCEKAEEVFEEMQ-QAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDR 385
Query: 330 G-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y ++ + + E AE +FEE + R + ++ L+ A+ R G + E ++ +
Sbjct: 386 ASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQ 445
Query: 389 AQLRGTEPNVRTWYLMATGY 408
G P+ M Y
Sbjct: 446 LHKSGLTPDTFALNAMLNAY 465
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
L+ AYC G LH+AE +I + + G PN + G L+ +EK VE ++
Sbjct: 216 LLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQR 270
>gi|255562460|ref|XP_002522236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538489|gb|EEF40094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 119/274 (43%), Gaps = 20/274 (7%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
LL+ Y+ A + Q+M +R +V T S++ Y + G + L HEME +
Sbjct: 341 TLLDMYSKCGDLNNAIRVFQKMGERSVVSWT----SLIAGYAREGLSGEGIRLFHEMERE 396
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
G+ D +T + +L ACA + E I K V + + D V + Y K G +
Sbjct: 397 GVRPDNFTVTAVLHACACSGSLE-IGKDVHDYVKENNMQKDRIVCNSLMDMYAKCGSMED 455
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVIS 336
A V L M NK +++ +I Y+ G ++ L ++ Q LK R C++
Sbjct: 456 ANLVF-----LEMPNKDIVSWNTMIGGYSKNGRPNETLHLFVAMVQELKPDGRTMACILP 510
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHD-IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
+ ++ +I + RN C D + + N LID Y + G L A ++
Sbjct: 511 ACASLAALDRGREI-HGYIQRNGCFDDLHVANALIDMYAKCGALALARLFFDMIPVK--- 566
Query: 396 PNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE 429
++ +W +M G + E+G+ + +AL E
Sbjct: 567 -DLISWTVMIAGDID----ERGICKIGRALFPWE 595
>gi|218189906|gb|EEC72333.1| hypothetical protein OsI_05540 [Oryza sativa Indica Group]
Length = 747
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 116/297 (39%), Gaps = 19/297 (6%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y LLNA+ A E A + +M G + ++ YN M+ Y + G ++ L E
Sbjct: 278 TTYNTLLNAWVRAGDLESARKVFDEMPGAGFAQNSVSYNVMIKGYVEAGKVEEAVGLFSE 337
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEG--IDKIVAM--MEADRGVVLDWTVYATAASGY 268
M EKG+ + TF+ L+ D EG ++ AM M R D +V+ +
Sbjct: 338 MGEKGLRLSEKTFAALMPGLC---DDEGRVVEARKAMDDMAERRLTPKDKSVFLRLVTTL 394
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-------- 320
+AG D AL V +KS R Y ++ A G D + V
Sbjct: 395 CRAGDLDGALDVHQKSGQFKHVLVDPRQYGVLMESLCAGGKCDGAVEVMDELLEKGTLLS 454
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
++ + Y VI L AE F + + + D N LI + + G+
Sbjct: 455 PKSPVLEGPAYNPVIEYLCSNGNTSKAETFFRQLMKKGV-DDKAAFNSLIRGHAKEGVPE 513
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPS 437
A+ ++ RG + + L+ +L+ N+ A+ ++E G PS
Sbjct: 514 AAQEILAIMTRRGVRTDPESHALLVDSFLKKNEPADAKTALDS---MMEQGHVPSPS 567
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 144/352 (40%), Gaps = 26/352 (7%)
Query: 104 QISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQA-------ASYFNCVPEKLKLPSVYI 156
Q + +++ F PA ++ + ++A + A F+ PE+ +
Sbjct: 121 QFFRFAYRRAGFSPEPATFSLLIPILASHSMLNHARCILLDTMPSFSIAPEE----ATVA 176
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
AL+ AY A +++ + + M D G+ + + YN+++ G + + M
Sbjct: 177 ALIAAYGKANIPQESVKLFRLMPDLGIARTALSYNAVLKAILCRGREAMARRIYNAMIAD 236
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
+ D T++ L+ E ++ M+ D GV D T Y T + +V+AG +
Sbjct: 237 AVTPDLSTYNTLIWGFGLCKKMEAALRVFGDMK-DHGVTPDVTTYNTLLNAWVRAGDLES 295
Query: 277 ALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYI 332
A V + M F++ +Y+ +I Y G ++ + ++ ++ L++ + +
Sbjct: 296 ARKVFDE----MPGAGFAQNSVSYNVMIKGYVEAGKVEEAVGLFSEMGEKGLRLSEKTFA 351
Query: 333 CVISSLLKFDG-MESAEKIFEEWESRNLC-HDIRIPNHLIDAYCRRGLLHKAETLIYKA- 389
++ L +G + A K ++ R L D + L+ CR G L A + K+
Sbjct: 352 ALMPGLCDDEGRVVEARKAMDDMAERRLTPKDKSVFLRLVTTLCRAGDLDGALDVHQKSG 411
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECL 441
Q + + R + ++ + + VE M + LLE GT P L
Sbjct: 412 QFKHVLVDPRQYGVLMESLCAGGKCDGAVEVMDE---LLEKGTLLSPKSPVL 460
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 122/306 (39%), Gaps = 29/306 (9%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S Y L+ + K E A + M+D G+ YN+++N + + G+ + + E
Sbjct: 243 STYNTLIWGFGLCKKMEAALRVFGDMKDHGVTPDVTTYNTLLNAWVRAGDLESARKVFDE 302
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M G + ++++++ A E + + M ++G+ L +A + G
Sbjct: 303 MPGAGFAQNSVSYNVMIKGYVEAGKVEEAVGLFSEM-GEKGLRLSEKTFAA-----LMPG 356
Query: 273 LSDKALAVL--RKSEVLMMHNKFS----RAYDFVITQYAACGNKDDVLRVWKRYKQ--NL 324
L D V+ RK+ M + + + ++T G+ D L V ++ Q ++
Sbjct: 357 LCDDEGRVVEARKAMDDMAERRLTPKDKSVFLRLVTTLCRAGDLDGALDVHQKSGQFKHV 416
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP-------NHLIDAYCRRG 377
V R Y ++ SL + A ++ +E + + P N +I+ C G
Sbjct: 417 LVDPRQYGVLMESLCAGGKCDGAVEVMDELLEKGTLLSPKSPVLEGPAYNPVIEYLCSNG 476
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV-EAMKKAL-VLLEAGTRWK 435
KAET + +G + A L +++GV EA ++ L ++ G R
Sbjct: 477 NTSKAETFFRQLMKKGVDDKA------AFNSLIRGHAKEGVPEAAQEILAIMTRRGVRTD 530
Query: 436 PSKECL 441
P L
Sbjct: 531 PESHAL 536
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 138/349 (39%), Gaps = 32/349 (9%)
Query: 98 RFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI- 156
+F A +I M K FV + + + + +E+A S F + +PSVY
Sbjct: 440 KFDQAFKIICEMMGKG-FVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTY 498
Query: 157 -ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEE 215
L++++ A ++A +M +G + Y ++++ Y + D L M
Sbjct: 499 TILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLL 558
Query: 216 KGIDCDKYTFSILLSACAAASDGEGIDKIVAMM-------EADRGVVLDWT--------V 260
+G + T++ L+ A E +I A M + D+ LD
Sbjct: 559 EGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVIT 618
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR--AYDFVITQYAACGNKDDVLRVWK 318
Y G KA +A +L + ++ H YD VI + G D V+
Sbjct: 619 YGALVDGLCKANRVKEAHELL---DTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFT 675
Query: 319 R-----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAY 373
+ Y NL Y+ I L K + ++ K+ + + ++ I ++D
Sbjct: 676 KMSERGYSPNLYTYSS----FIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGL 731
Query: 374 CRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
C+ G +A L+ K + +G PNV T+ M G+ ++ + E+ +E +
Sbjct: 732 CKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFR 780
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 136/340 (40%), Gaps = 32/340 (9%)
Query: 111 KKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSA 168
K++ V + I +D K I+QA +F+ + K P+V Y AL++AY AK
Sbjct: 487 KRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQM 546
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM--EEKGIDCDKY--- 223
A+ + + M G + Y ++++ + + G +K + M + + D DKY
Sbjct: 547 PVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKL 606
Query: 224 -----------TFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
T+ L+ A+ + +++ M A G + VY G+ K G
Sbjct: 607 DHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLA-HGCEPNQIVYDAVIDGFCKIG 665
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD----VLRVWKRYKQNLKVYN 328
A V K M + + + + C KD+ VL+V + +N N
Sbjct: 666 KLQDAQEVFTK-----MSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPN 720
Query: 329 RG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y ++ L K + A K+ + E + ++ +ID + + G + + L
Sbjct: 721 VVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFR 780
Query: 388 KAQLRGTEPNVRTWYLMATGYLQN---NQSEKGVEAMKKA 424
+G PN T+ ++ N +++ K ++ MK+
Sbjct: 781 DMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQT 820
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 124/331 (37%), Gaps = 61/331 (18%)
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
V T+ YN M++ + +++ ++H M + T+ ILLS C
Sbjct: 275 FVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCK 334
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK------------------- 283
+I++MM + G + ++ + Y K+ A + +K
Sbjct: 335 RILSMMITE-GCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGS 393
Query: 284 ---------SEVL-MMHNKFSRAYDF-VITQYAACGNKDDVLRVWKRYKQNLKVY----N 328
S++L ++ +S D V+ N L ++ Q K+
Sbjct: 394 VCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMG 453
Query: 329 RGYIC-------VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
+G++ VI L +E A +FEE + + + LID++C+ GL+ +
Sbjct: 454 KGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQ 513
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPS---- 437
A + +G PNV T+ + YL+ Q E + ++LLE KP+
Sbjct: 514 ARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFE--MMLLEG---CKPNVVTY 568
Query: 438 -----KECLA-----ACLGYYKKERDIEGAD 458
C A AC Y + DIE +D
Sbjct: 569 TALIDGHCKAGQIEKACQIYARMRGDIESSD 599
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 111/286 (38%), Gaps = 55/286 (19%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P VY AL+ E A + ++M RG+ + + +++ + + G+ + + L
Sbjct: 308 PDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLEL 367
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
EM E+G+ D T++ +++ A D + IV M + G+ D Y T GY
Sbjct: 368 HREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRS-AGLRPDTVTYTTLIDGYC 426
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
K D A+ + KQN+
Sbjct: 427 KEEELDMAMEI----------------------------------------KQNMVAEGV 446
Query: 330 G-----YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
G Y +IS L K AE++ E L D +IDA+CR+G +
Sbjct: 447 GLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLR 506
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA 430
L+ + Q +G +P V T+ ++ G+ + Q MK A +LL A
Sbjct: 507 LLKEMQNKGRKPGVVTYNVIMNGFCKLGQ-------MKNADMLLNA 545
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 153 SVYIALLNAYACAKSAEKAEI-IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
+ Y +++A+ C K K + ++++M+++G + YN +MN + + G K D L++
Sbjct: 486 TTYTMVIDAF-CRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLN 544
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
M G+ D T++ILL G+ D + +++ +G V D VY + VK
Sbjct: 545 AMINIGVSPDDITYNILLD--GHCKHGKVTD--IEELKSAKGTVPDLGVYTSIVGEIVK 599
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
++ L++ + SA+ +F+E +SR + + N +I CR G L AETL + G
Sbjct: 246 LMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAG 305
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERD 453
P+V T+ + G + + E +K G KP+ + + K+ D
Sbjct: 306 VTPDVYTYGALIQGLCRVGRIEDARGVFEKM-----CGRGMKPNAVVFTILIDAHCKKGD 360
Query: 454 IE 455
E
Sbjct: 361 AE 362
>gi|115529197|dbj|BAF34331.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 728
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 131/297 (44%), Gaps = 17/297 (5%)
Query: 135 IEQAASYFNCVPEK-LKLPSV-YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
IE+A + V E + L V Y +++ AY A +KA ++++MR+ LV +I Y+
Sbjct: 152 IEEAERIMDTVEESGMSLGLVGYNSMITAYGKACLYDKAARLVEKMREEDLVPDSITYSC 211
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
M+ + G K+ S EM+ I F+ L+S A D EGI +++ M+
Sbjct: 212 MIGACGRVGKLKEALSWFAEMKRLEIKPASSNFNTLISPYGKAKDVEGIVRVITEMK-KY 270
Query: 253 GVVLDWTVYATAASGYVKAGL---SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN 309
G DW A Y +AGL + L +LR + + + + +Y ++ Y C
Sbjct: 271 GCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAGWV----EETGSYGTLLHVYLKCNL 326
Query: 310 KDDVLRVW---KRYKQNLKVY-NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
+ LR++ ++ K Y R IC FDG A+ +F+E + + +
Sbjct: 327 PKEALRIFLAMRKAGMAPKEYMCRSLICTFRDAEMFDG---AKSVFKEMQVAGVTPSLES 383
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+I Y G + +AE L + + ++ + +M Y++ + E ++ K
Sbjct: 384 SCTMIYVYGMNGDVKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYK 440
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ++L+AY A EK ++ +M + G+ YN ++N Y + ++++L M+
Sbjct: 593 YNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRTMQ 652
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAG 272
E+G+ D++T++ ++ A + D+ V +A D G+ D Y S + +AG
Sbjct: 653 EEGVVPDRWTYNTIIRTYGFA---DYPDRAVYWFKAMQDAGISPDRVTYMILVSTFERAG 709
Query: 273 LSDKA 277
D+A
Sbjct: 710 NIDEA 714
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ L++AYA + E + +M++ G YNS+++ Y + G +K+ ++ ME
Sbjct: 558 FSTLVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARME 617
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA------DRGVVLDWTVYATAASGY 268
G+ D +++IL++ G + ++A ME + GVV D Y T Y
Sbjct: 618 NSGMRMDLASYNILINT-------YGKNYMIAEMETLFRTMQEEGVVPDRWTYNTIIRTY 670
Query: 269 VKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ 322
A D+A+ + + + ++ + Y +++ + GN D+ R R Q
Sbjct: 671 GFADYPDRAVYWFKAMQDAGISPDRVT--YMILVSTFERAGNIDEAARWCLRMSQ 723
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/365 (19%), Positives = 151/365 (41%), Gaps = 30/365 (8%)
Query: 68 VPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKS------------NF 115
V L+DQ VE G D +I L+ + S A+ + M ++ N
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 116 VLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIM 175
+ D+ + +L+ K++ + A+ +Y ++++ + + A +
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVV-----------IYSTVIDSLCKYRHEDDALNLF 283
Query: 176 QQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAA 235
+M ++G+ I Y+S+++ + L+ +M E+ I+ + TF+ L+ A
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343
Query: 236 SDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR 295
+K+ M R + D Y++ +G+ D+A + E+++ + F
Sbjct: 344 GKLVEAEKLYDEM-IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF---ELMISKDCFPN 399
Query: 296 --AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFE 352
Y+ +I + D+ + +++ Q V N Y +I + ++A+ +F+
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 459
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNN 412
+ S + +I N L+D C+ G L KA + Q EP + T+ +M G +
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 519
Query: 413 QSEKG 417
+ E G
Sbjct: 520 KVEDG 524
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 122/283 (43%), Gaps = 21/283 (7%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PS+ +LLN Y K A ++ QM + G TI + ++++ + + +L
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 212
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+ M ++G + T+ ++++ D + ++ MEA + + + +Y+T
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK-IEANVVIYSTVIDSLC 271
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK----DDVLR-----VWKRY 320
K D AL + + M NK R + +C D R + ++
Sbjct: 272 KYRHEDDALNLFTE-----MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
N+ +N +I + +K + AEK+++E R++ DI + LI+ +C L
Sbjct: 327 NPNVVTFN----ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+A+ + + PNV T+ + G+ + + ++GVE ++
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425
>gi|356528278|ref|XP_003532731.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Glycine max]
Length = 1079
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 122/289 (42%), Gaps = 21/289 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY +L Y + AE I +M D G + +M+ Y + G +K + S +
Sbjct: 198 VYTIVLRLYGQVGKLKLAEEIFLEMLDVGCEPDEVACGTMLCSYARWGRHKAMLSFYSAI 257
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+E+GI F+ ++S+ S + + M +GV+ + Y A S +VK GL
Sbjct: 258 KERGIILSVAVFNFMMSSLQKKSLHREVVHVWKDM-LGKGVIPNNFTYTVAISSFVKEGL 316
Query: 274 SDKALAVLRKSEVLMMHN----KFSRAYDFVITQYAACGNKDDVLRVWK--RYKQNLKVY 327
+ A + M N Y +I A GN+D+V R+++ R++ +
Sbjct: 317 HEDAFKTFDE-----MRNYGVVPEELTYSLLINLNAKSGNRDEVQRLYEDMRFR---GII 368
Query: 328 NRGYIC--VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
Y C ++S K++ A +F E + D I LI Y + GL A
Sbjct: 369 PSNYTCASLLSLYYKYEDYPRALSLFSEMVRNKISTDEVIYGLLIRIYGKLGLYEDAHKT 428
Query: 386 IYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRW 434
+ + RG + +T+ MA +L + +K +E ++ L+++ W
Sbjct: 429 FEETKNRGQLTSEKTYLAMAQVHLTSGNVDKALEVIE----LMKSSNLW 473
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 94/214 (43%), Gaps = 10/214 (4%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+ + + G +E +I + ++ A++ M +++ P D ++LI
Sbjct: 809 IFEHMISSGVAPSIETFNTMISVYGQDQKLDRAVE----MFNQASSCSVPLDEKTYMNLI 864
Query: 130 A---KVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
K + +A+ F+ + E P Y ++N YA A + E + M+ +G +
Sbjct: 865 GYYGKAGLMLEASQLFSKMQEGGIKPGKVSYNIMINVYANAGVLHETEKLFHTMQRQGYL 924
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI 244
+ Y S++ Y ++ NY K + +H M+ KGI F+ILL A A ++
Sbjct: 925 PDSFTYLSLVQAYTRSLNYSKAEETIHAMQSKGIPPSCVHFNILLHAFIKAGLIHEAKRV 984
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKAL 278
+ + G+V D + T +GY+K G ++ +
Sbjct: 985 YEDL-STFGLVPDLVCHRTMLNGYLKCGYVEEGI 1017
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 110/264 (41%), Gaps = 9/264 (3%)
Query: 159 LNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGI 218
+N+ ++AE I+Q+ + L T+ YN+ + + G S+ M G+
Sbjct: 759 VNSLTNGGKHQEAENIVQRSLEENLELDTVAYNTFIKAMLEAGKLHFASSIFEHMISSGV 818
Query: 219 DCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDK 276
TF+ ++S + +D+ V M + V LD Y Y KAGL +
Sbjct: 819 APSIETFNTMISVYG---QDQKLDRAVEMFNQASSCSVPLDEKTYMNLIGYYGKAGLMLE 875
Query: 277 ALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYICV 334
A + K E + K S Y+ +I YA G + +++ +Q + Y+ +
Sbjct: 876 ASQLFSKMQEGGIKPGKVS--YNIMINVYANAGVLHETEKLFHTMQRQGYLPDSFTYLSL 933
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
+ + + AE+ +S+ + N L+ A+ + GL+H+A+ + G
Sbjct: 934 VQAYTRSLNYSKAEETIHAMQSKGIPPSCVHFNILLHAFIKAGLIHEAKRVYEDLSTFGL 993
Query: 395 EPNVRTWYLMATGYLQNNQSEKGV 418
P++ M GYL+ E+G+
Sbjct: 994 VPDLVCHRTMLNGYLKCGYVEEGI 1017
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 22/252 (8%)
Query: 142 FNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
+ VPE+L Y L+N A + + ++ + + + MR RG++ S++++YY+
Sbjct: 330 YGVVPEEL----TYSLLINLNAKSGNRDEVQRLYEDMRFRGIIPSNYTCASLLSLYYKYE 385
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVY 261
+Y + SL EM I D+ + +L+ E K + +RG + Y
Sbjct: 386 DYPRALSLFSEMVRNKISTDEVIYGLLIRIYGKLGLYEDAHKTFEETK-NRGQLTSEKTY 444
Query: 262 ATAASGYVKAGLSDKALAVLRKSEVLMMHNK-FSR-AYDFVITQYAACGNKDDVLRVWKR 319
A ++ +G DKAL V+ E++ N FSR AY ++ Y K+DV
Sbjct: 445 LAMAQVHLTSGNVDKALEVI---ELMKSSNLWFSRFAYIVLLQCYVM---KEDVASAEGT 498
Query: 320 YKQNLKVYNRGYI----C--VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAY 373
+ L + G C ++S + + A++ + D + ++ Y
Sbjct: 499 F---LALSKTGPPDAGSCNDMLSLYMGLNLTNKAKEFIVQIRENETNFDKELYRTVMKVY 555
Query: 374 CRRGLLHKAETL 385
C+ G+L +AE L
Sbjct: 556 CKEGMLPEAEQL 567
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 101/245 (41%), Gaps = 6/245 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y ++++ E A +MR+ G+V + + Y+ ++N+ ++GN ++ L +M
Sbjct: 303 TYTVAISSFVKEGLHEDAFKTFDEMRNYGVVPEELTYSLLINLNAKSGNRDEVQRLYEDM 362
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+GI YT + LLS D + + M ++ + D +Y Y K GL
Sbjct: 363 RFRGIIPSNYTCASLLSLYYKYEDYPRALSLFSEMVRNK-ISTDEVIYGLLIRIYGKLGL 421
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYI 332
+ A +++ + Y + + GN D L V + K NL YI
Sbjct: 422 YEDAHKTFEETKNRGQLTS-EKTYLAMAQVHLTSGNVDKALEVIELMKSSNLWFSRFAYI 480
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
++ + + + SAE F S+ D N ++ Y L +KA+ I Q+R
Sbjct: 481 VLLQCYVMKEDVASAEGTFLAL-SKTGPPDAGSCNDMLSLYMGLNLTNKAKEFI--VQIR 537
Query: 393 GTEPN 397
E N
Sbjct: 538 ENETN 542
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 126/304 (41%), Gaps = 43/304 (14%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK--LDSLMH 211
VY A++ Y+ + KA+ ++ MR RG V I +N+++N ++G + L+
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLTPNLVVELLD 286
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
+ G+ D T++ LLSAC+ S+ EG K+ MEA R WT Y S Y +
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWT-YNAMISVYGRC 345
Query: 272 GLSDK-------------------------ALAVLRKSEVL---------MMHNKFSRAY 297
GL+ + A A R +E + M K Y
Sbjct: 346 GLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY 405
Query: 298 DFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG---YICVISSLLKFDGMESAEKIFEEW 354
+ +I Y G D L+++K K L N Y +I SL K + A + E
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDMK-GLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEM 464
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR-GTEPNVRTWYLMATGYLQNNQ 413
+ ++ + LI Y + G +AE + LR GT+P+ + +M L+ N+
Sbjct: 465 LDVGIKPTLQTYSALICGYAKAGKREEAED-TFSCMLRSGTKPDNLAYSVMLDVLLRGNE 523
Query: 414 SEKG 417
+ K
Sbjct: 524 TRKA 527
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 18/283 (6%)
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
YN+MM VY ++G + K L+ M ++G D +F+ L++A S G + +V +++
Sbjct: 228 YNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINA-RLKSGGLTPNLVVELLD 286
Query: 250 ADR--GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC 307
R G+ D Y T S + + A+ V E Y+ +I+ Y C
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDL-WTYNAMISVYGRC 345
Query: 308 GNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEK---IFEEWESRNLCHDIR 364
G + R++ + LK ++ + S L F + EK ++++ + D
Sbjct: 346 GLAAEAERLF--IELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEM 403
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQ--LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
N +I Y ++G L A L YK L G P+ T+ ++ + N+S VEA
Sbjct: 404 TYNTIIHMYGKQGQLDLALQL-YKDMKGLSGRNPDAITYTVLIDSLGKANRS---VEAAA 459
Query: 423 KALVLLEAGTRWKPSKECLAACL-GYYKKERDIEGADYFIKLL 464
+L+ G KP+ + +A + GY K + E D F +L
Sbjct: 460 LMSEMLDVGI--KPTLQTYSALICGYAKAGKREEAEDTFSCML 500
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 133/337 (39%), Gaps = 50/337 (14%)
Query: 132 VQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYN 191
V E +F C P +Y ++ AY K +KAE ++ +R G +N
Sbjct: 739 VNQAETKGFHFACSP-------MYTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWN 791
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
S+M+ Y + G Y++ ++ + M G + + LL A DG ++++ ++E
Sbjct: 792 SLMSAYAECGCYERARAIFNTMMRDGPSPTVESINKLLHALCV--DGR-LEELYVVVEE- 847
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKD 311
L D + KS +L+M + F+RA GN
Sbjct: 848 ---------------------LQDMGFKI-SKSSILLMLDAFARA-----------GNIF 874
Query: 312 DVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+V +++ K + R Y +I L K + AE + E E N ++ I N ++
Sbjct: 875 EVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 371 DAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA 430
Y K + + + G EP+ T+ + Y ++ + E+G M++ L
Sbjct: 935 KMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNL--- 991
Query: 431 GTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGK 467
P + + + + K++ +E A+ + L K
Sbjct: 992 --GLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSK 1026
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 102/268 (38%), Gaps = 12/268 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y LL+A + + E A + + M YN+M++VY + G + + L E+
Sbjct: 299 TYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIEL 358
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E KG D T++ LL A A + E + ++ M+ G D Y T Y K G
Sbjct: 359 ELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQ-KMGFGKDEMTYNTIIHMYGKQGQ 417
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYI 332
D AL + + + L N + Y +I + + +K + Y
Sbjct: 418 LDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYS 477
Query: 333 CVISSLLKFDGMESAEKIF-----EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
+I K E AE F + NL + + ++D R KA L
Sbjct: 478 ALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSV-----MLDVLLRGNETRKAWVLYR 532
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSE 415
G P+ + LM G ++ N+S+
Sbjct: 533 DMISDGHTPSHSLYELMILGLMKENRSD 560
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 84/187 (44%), Gaps = 9/187 (4%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y L+ Y + E+ +MQQMR+ GL K Y S+++ + + ++ + L E
Sbjct: 963 TTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEE 1022
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ KG+ D+ + ++ + +K++ MM+ + G+ Y +G
Sbjct: 1023 LLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMK-NAGIEPTLATMHLLMVSYSSSG 1081
Query: 273 ---LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN-KDDVLRVWKRYKQNLKVYN 328
++K L+ L+ +EV + + Y VI Y + K + R+ + K+ L+ +
Sbjct: 1082 NPQEAEKVLSNLKNTEVELT----TLPYSSVIDAYLRSKDYKSGIERLLEMKKEGLEPDH 1137
Query: 329 RGYICVI 335
R + C +
Sbjct: 1138 RIWTCFV 1144
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 122/296 (41%), Gaps = 17/296 (5%)
Query: 115 FVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAE 172
F ++ + + + LD A+ I + ++ + LP++ Y ++ K AE
Sbjct: 853 FKISKSSILLMLDAFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAE 912
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILLSA 231
I++ +M + + +NSM+ +Y +YKK + ++E G++ D+ T+ ++++
Sbjct: 913 IMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMY 972
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLD--WTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
C EG ++M+ R + LD Y + S + K ++A + E+L
Sbjct: 973 CRDRRPEEG----YSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFE--ELLSK 1026
Query: 290 HNKFSRAYDFVITQYAACGNKDD----VLRVWKRYKQNLKVYNRGYICVISSLLKFDGME 345
K R++ + + + D +L++ K + + V S +
Sbjct: 1027 GLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMV--SYSSSGNPQ 1084
Query: 346 SAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
AEK+ ++ + + +IDAY R + + + G EP+ R W
Sbjct: 1085 EAEKVLSNLKNTEVELTTLPYSSVIDAYLRSKDYKSGIERLLEMKKEGLEPDHRIW 1140
>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 132/304 (43%), Gaps = 14/304 (4%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+++A + + EK P+V + +++ AY+ A EKA + M GL ++ +S
Sbjct: 340 LDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSS 399
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
++ + ++ L++EM +G+ +K F++LL D G + ME R
Sbjct: 400 LIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEG-R 458
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAV-LRKSEVLMMHNKFSRAYDFVITQYAACGNKD 311
G+ D ++ +G GL D+A V L+ S+ M N F Y+ +I + G
Sbjct: 459 GIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNF--VYNSLIRGFCNSGRLQ 516
Query: 312 DVL---RVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
+ L R R ++ I I+ L K M+SA +F L DI N
Sbjct: 517 EALMLEREMARKGLLPDIFTTNII--INGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNT 574
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLL 428
LID YC+ + ++ K G +P++ T+ + G + + V +++ L+
Sbjct: 575 LIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEE---LI 631
Query: 429 EAGT 432
AG
Sbjct: 632 SAGV 635
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 114/261 (43%), Gaps = 19/261 (7%)
Query: 144 CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
C P + +V +NA+ + +A + M++ G + + YN++MN Y + +
Sbjct: 215 CTPSLVTFGTV----INAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDI 270
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYAT 263
+ + L EM+ K + D TF+IL++ E D+++ + + + ++Y
Sbjct: 271 GQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSIS-SLYNI 329
Query: 264 AASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRY 320
SG AG D+A+ L M+ + A++ +I Y+ G ++ + +K Y
Sbjct: 330 CVSGLCWAGWLDEAMKFLED----MLEKGITPTVVAFNSIIAAYSRAGLEE---KAYKAY 382
Query: 321 KQNLK--VYNRGYIC--VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRR 376
+ +K ++ C +I L K ++ A + E L + L+D Y R
Sbjct: 383 RMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRM 442
Query: 377 GLLHKAETLIYKAQLRGTEPN 397
G + A +L + + RG P+
Sbjct: 443 GDVAGAYSLWNEMEGRGIHPD 463
>gi|449446895|ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Cucumis sativus]
Length = 668
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 162/378 (42%), Gaps = 48/378 (12%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWM--TKKSNFVLTPADVAI 124
+ P L ++ G L + L +I++ F + R+ Q+ WM T K+N + +
Sbjct: 90 LAPALARY---GGLLKAQDLNVILRHFGMLSRWKDLSQLFEWMQETGKTNV----SSYSS 142
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRG 182
+ + + +A +N + E S++I ++LN + + + QM++ G
Sbjct: 143 YIKFMGRGLNPLKALEVYNNIEEVSIKNSIFICNSILNCLVRNGKFDTSVKLFHQMKNDG 202
Query: 183 LVKKTIDYNSMMNVYYQTGN-YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
L T+ Y++M+ + + Y K L+ E+++ G+ D ++ L++ CA+ + E
Sbjct: 203 LCPDTVTYSTMLTGCIRVKHGYAKAMELLKELQDNGLCMDCVSYGTLIAICASHNRLEDA 262
Query: 242 DKIVAMMEAD----------------------------------RGVVLDWTVYATAASG 267
++ M A+ G+V + + T
Sbjct: 263 ERFFNQMRAEGHSPNMFHYGSLLNAYSINGDYKKADELIEDMKLTGLVPNKVILTTLLKV 322
Query: 268 YVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKV 326
YV+ GL +K+ +L + E L + + Y ++ A G+ + V+ K +N+K
Sbjct: 323 YVRGGLFEKSRKLLSELESLG-YGENEMPYCLLMDGLAKAGSIREAKTVFDEMKAKNVKT 381
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
+ +IS+ + +E A+ + +++E+ +DI I N ++ AYCR G + ++
Sbjct: 382 DGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVILNTMLCAYCRAGEMESVMQML 441
Query: 387 YKAQLRGTEPNVRTWYLM 404
K P+ T++++
Sbjct: 442 RKMDDLAISPDYNTFHIL 459
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 9/235 (3%)
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
+M RG+ I Y++++ + G SL++EM K I+ D YT++IL+ A
Sbjct: 297 EMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEG 356
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR---KSEVLMMHNKF 293
+ ++ +M + GV + Y+T GY G A + ++EV N
Sbjct: 357 KLKEAKNLLGVMTKE-GVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEV----NPS 411
Query: 294 SRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
+Y+ +I + D+ + + + +N+ Y +I L K + SA + +
Sbjct: 412 VCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMK 471
Query: 353 EWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
E R D+ L+D C+ L KA L K + RG +PN T+ + G
Sbjct: 472 ELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDG 526
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 122/269 (45%), Gaps = 13/269 (4%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++A ++A+ ++ M G+ + Y+++M+ Y G + H M
Sbjct: 345 YTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMV 404
Query: 215 EKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ ++ +++I+++ C S E ++ + M+ + VV + Y + G K+G
Sbjct: 405 QTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLH--KNVVPNTVTYNSLIDGLCKSGR 462
Query: 274 SDKALAVLRKSEVLMMHNKFSRA----YDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYN 328
AL ++++ +H++ A Y ++ N D + ++ + K+ ++
Sbjct: 463 ITSALDLMKE-----LHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNK 517
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y +I L K +++A+K+F+ + C D+ N +I C+ G+L +A + K
Sbjct: 518 YTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSK 577
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ G P+ T+ ++ + ++++K
Sbjct: 578 MEDNGCIPDAVTFEIIIRSLFEKDENDKA 606
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 103/241 (42%), Gaps = 21/241 (8%)
Query: 132 VQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
V + A F+ + + PSV Y ++N KS ++A ++++M + +V T+
Sbjct: 390 VGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVT 449
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA--M 247
YNS+++ ++G LM E+ +G D T++ LL + +DK +A M
Sbjct: 450 YNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDG---LCKNQNLDKAIALFM 506
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRA------YDFVI 301
+RG+ + Y G K A L+ ++ L H Y+ +I
Sbjct: 507 KMKERGIQPNKYTYTALIDGLCKG-------ARLKNAQKLFQHILVKGCCIDVYTYNVMI 559
Query: 302 TQYAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLC 360
G D+ L + + + N + + + +I SL + D + AEK+ E ++ L
Sbjct: 560 GGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619
Query: 361 H 361
H
Sbjct: 620 H 620
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 103/267 (38%), Gaps = 58/267 (21%)
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA---------------- 231
I++ ++ + ++ SL +ME KGI+ D T SIL++
Sbjct: 133 IEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGK 192
Query: 232 --------------------CAAASDGEGI---DKIVAMMEADRGVVLDWTVYATAASGY 268
C + + DK+VA +G ++ Y T +G
Sbjct: 193 ILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVA-----QGFQMNQVSYGTLLNGL 247
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
K G + A+ +LR M+ ++ +R D V+ G D L V + Y ++ +
Sbjct: 248 CKIGETRCAIKLLR-----MIEDRSTRP-DVVMYNTIIDGLCKDKL-VNEAYDFYTEMNS 300
Query: 329 RG-------YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
RG Y +I + A + E +N+ D+ LIDA C+ G L +
Sbjct: 301 RGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKE 360
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGY 408
A+ L+ G +PNV T+ + GY
Sbjct: 361 AKNLLGVMTKEGVKPNVVTYSTLMDGY 387
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 129/290 (44%), Gaps = 9/290 (3%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I +D K+ +E+A + + +K PS+ + +L+ + + +A +++ ++
Sbjct: 436 IMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLH 495
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGI 241
GL + Y ++MN Y + GN KL L+ EM K I+ T+++++ E
Sbjct: 496 GLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEES 555
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN--KFSRAYDF 299
+++ M A +G+ D Y T + KA KA +L + +++HN Y+
Sbjct: 556 VQLLEDMRA-KGLAPDQITYNTIIQCFCKAKDMRKAFELL---DDMLIHNLEPTPATYNV 611
Query: 300 VITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
+I G+ +D RV + +N+ + Y +I + + A K+F + +
Sbjct: 612 LIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKG 671
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
I+ + +I+ C+R L+++A+ G P+ + +M +
Sbjct: 672 FEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAF 721
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 121/283 (42%), Gaps = 20/283 (7%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PSV + +++ Y A+ A+ M G++ T YN +++ G+ ++ L
Sbjct: 183 PSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALEL 242
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
++ME++G+ D T+ I+ G +I+ M D G+ D Y G+
Sbjct: 243 TNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHC 302
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLR-VWKRYKQNLK 325
+ G ++AL + R ++ + F Y +++ G D+ L+ +++ NL+
Sbjct: 303 QMGNIEEALRLRRD----LLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQ 358
Query: 326 VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH-----LIDAYCRRGLLH 380
Y +I L K ++ A ++++E +C + PN ++ C +G+L
Sbjct: 359 PDLVTYSILIHGLCKQGKVQQAIQLYKE-----MCFNRIFPNSFAHSGILKGLCEKGMLS 413
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
A + P+V + +M GY++ E+ V K+
Sbjct: 414 DARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKR 456
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/290 (18%), Positives = 117/290 (40%), Gaps = 44/290 (15%)
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
EII + + D GL + Y ++ + Q GN ++ L ++ G + +S+LLS+
Sbjct: 276 EIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSS 335
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV-LMMH 290
+ +++ MEA+ + D Y+ G K G +A+ + ++ +
Sbjct: 336 LCKRGQVDEALQLLYEMEAN-NLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFP 394
Query: 291 NKFSRA---------------------------------YDFVITQYAACGNKDDVLRVW 317
N F+ + Y+ +I Y G+ ++ +R++
Sbjct: 395 NSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLY 454
Query: 318 KRYKQ-----NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
KR + ++ +N +I K + A ++ E + L L++A
Sbjct: 455 KRLRDKAITPSIVTFNS----LIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNA 510
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
YC G ++K L+ + L+ EP V T+ ++ G + + E+ V+ ++
Sbjct: 511 YCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLE 560
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 111/260 (42%), Gaps = 21/260 (8%)
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
QM + + I YN++M G K+ L ++M K I D YTF+IL+
Sbjct: 144 QMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEG 203
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL----RKSEVLMMHNK 292
+ + ++A+M + V D Y + GY +KA V R+ +H
Sbjct: 204 EMKKARNVLAVM-IKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVH-- 260
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
+Y +I D+ + + K N SSL+ DG+ + +IF+
Sbjct: 261 ---SYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNT---VTYSSLI--DGLHKSGRIFD 312
Query: 353 EWESRNLCH------DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
W+ N H D+ N L+DA C+ + KA TL+ K + +G +P++ T+ ++
Sbjct: 313 AWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVD 372
Query: 407 GYLQNNQSEKGVEAMKKALV 426
G +N + + E + L+
Sbjct: 373 GLCKNGRLKDAQEVYQILLI 392
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 21/232 (9%)
Query: 199 QTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD-----RG 253
+ ++ + SL H+ME +GI D +IL++ DK+ + +G
Sbjct: 20 KINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKVKETLHFHDDVIAKG 79
Query: 254 VVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK--D 311
L+ Y T G KAG + A+ VLR + L++ Y +I Y+ C +K
Sbjct: 80 FQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVV-MYSTII--YSLCKDKLVI 136
Query: 312 DVLRVW-----KRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
D ++ KR ++ YN Y C+I LK A +F + +N+ DI
Sbjct: 137 DAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLK-----EAVGLFNQMLLKNIKPDIYT 191
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
N L+D C+ G + KA ++ + +P+V T+ + GY Q K
Sbjct: 192 FNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKA 243
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 15/289 (5%)
Query: 107 MWMTKKSNFVLTPADVAIR--LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAY 162
+ M + V +P VA +D K + +A F + ++ P + Y ++++A
Sbjct: 207 LRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHAL 266
Query: 163 ACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDK 222
A++ +KAE ++QM ++G++ YN+++ Y TG +K+ + EM + I D
Sbjct: 267 CKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDV 326
Query: 223 YTFSILL-SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL 281
+ L+ S C E D M A +G D Y +GY G L +
Sbjct: 327 VALNTLMGSLCKYGKIKEARDVFDTM--AMKGQNPDVFSYTIMLNGYATKG----CLVDM 380
Query: 282 RKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISS 337
LM+ + + ++ +I YA CG D + ++ + +K + Y+ VI++
Sbjct: 381 TDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAA 440
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
L + M+ A + F + + + D + LI +C G L KA+ LI
Sbjct: 441 LCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELI 489
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 135/337 (40%), Gaps = 44/337 (13%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ K + +++A ++ + K LP Y L+ Y+ ++A + ++MR + ++
Sbjct: 266 LCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 325
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ N++M + G K+ + M KG + D ++++I+L+ A + +
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD 385
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
+M D G+ D + Y G+ DKA+ + + + H ++ A
Sbjct: 386 LMLGD-GIAPDIYTFNVLIKAYANCGMLDKAMIIFNE---MRDHGVKPHVVTYMTVIAAL 441
Query: 307 C--GNKDDVLR----------VWKRYKQNL-------------------KVYNRG----- 330
C G DD + V +Y + ++ N G
Sbjct: 442 CRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDI 501
Query: 331 --YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+ +I++L K + A+ IF+ + L D + N L+D YC G + KA +
Sbjct: 502 VFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 561
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
G EPNV + + GY + + ++G+ ++ L
Sbjct: 562 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREML 598
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 125/305 (40%), Gaps = 53/305 (17%)
Query: 116 VLTPADV--AIRLDLIAKVQGIEQAASYFN-CVPEKLKLPSVYIA-LLNAYACAKSAEKA 171
VL+P AI +D + E A ++F + L++ ++ + LL + AK ++A
Sbjct: 108 VLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA 167
Query: 172 -EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC--DKYTFSIL 228
+I++ + + G V YN ++ G + D L+ M E G C D ++ +
Sbjct: 168 LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTV 227
Query: 229 LSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
+ D + D M++ RG+ D Y++ KA DKA A LR+
Sbjct: 228 IDGFFKEGDVNKACDLFKEMVQ--RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQ---- 281
Query: 288 MMHNKF----SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDG 343
M NK + Y+ +I Y++ G WK
Sbjct: 282 -MVNKGVLPDNWTYNNLIYGYSSTGQ-------WKE------------------------ 309
Query: 344 MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYL 403
A ++F+E +++ D+ N L+ + C+ G + +A + ++G P+V ++ +
Sbjct: 310 ---AVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTI 366
Query: 404 MATGY 408
M GY
Sbjct: 367 MLNGY 371
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 113/276 (40%), Gaps = 7/276 (2%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P +Y L+ AYA +KA II +MRD G+ + Y +++ + G
Sbjct: 394 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453
Query: 210 MHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
++M ++G+ DKY + L+ C S + + I +M + G+ LD + + +
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIM--NNGMRLDIVFFGSIINNL 511
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVY 327
K G A + + + +H + Y+ ++ Y G + LRV+ ++
Sbjct: 512 CKLGRVMDAQNIFDLTVNVGLHPD-AVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 570
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
GY +++ K ++ +F E + + + N +ID G A+ +
Sbjct: 571 VVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFH 630
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ G N T+ ++ G +N ++ + K+
Sbjct: 631 EMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKE 666
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 148/368 (40%), Gaps = 36/368 (9%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D L Q V +G D +I + ++ A+++ M ++S + P VA+
Sbjct: 273 DKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS---ILPDVVAL 329
Query: 125 R--LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRD 180
+ + K I++A F+ + K + P V Y +LN YA + M
Sbjct: 330 NTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLG 389
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGE 239
G+ +N ++ Y G K + +EM + G+ T+ +++A C +
Sbjct: 390 DGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDD 449
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL--MMHNKFSRAY 297
++K M+ D+GVV D Y G+ G ++L+ E++ +M+N
Sbjct: 450 AMEKFNQMI--DQGVVPDKYAYHCLIQGFCTHG------SLLKAKELISEIMNNGMRLDI 501
Query: 298 DF---VITQYAACGNKDDV-----LRVWKRYKQNLKVYNR---GYICVISSLLKFDGMES 346
F +I G D L V + VYN GY C++ ME
Sbjct: 502 VFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGY-CLVGK------MEK 554
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
A ++F+ S + ++ L++ YC+ G + + +L + +G +P+ + ++
Sbjct: 555 ALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIID 614
Query: 407 GYLQNNQS 414
G + ++
Sbjct: 615 GLFEAGRT 622
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 98/240 (40%), Gaps = 22/240 (9%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY L++ Y EKA + M G+ + Y +++N Y + G + SL EM
Sbjct: 538 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME-ADRGVVLDWTVYATAASGYVKAG 272
+KGI ++I++ A G + V E + G+ ++ Y+ G K
Sbjct: 598 LQKGIKPSTILYNIIIDGLFEA--GRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNR 655
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-- 330
D+A+ + + E+ M+ K +IT RV + + G
Sbjct: 656 CFDEAIFLFK--ELRAMNVKID-----IITLNTMIAGMFQTRRVEEAKDLFASISRSGLV 708
Query: 331 -----YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
Y +I++LLK +E AE +F ++ D R+ NH++ R LL K E +
Sbjct: 709 PCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV-----RELLKKNEIV 763
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 8/206 (3%)
Query: 223 YTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL- 281
YT++IL+ C A E + G+ +D + + G+ +A +D+AL +L
Sbjct: 114 YTYAILMDCCTRAHRPELALAFFGQL-LRTGLRVDAIIASHLLKGFCEAKRTDEALDILL 172
Query: 282 -RKSEVLMMHNKFSRAYDFVI---TQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISS 337
R E+ + + FS Y+ ++ G DD+LR+ Y VI
Sbjct: 173 HRTPELGCVPDVFS--YNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
K + A +F+E R + D+ + ++ A C+ + KAE + + +G P+
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290
Query: 398 VRTWYLMATGYLQNNQSEKGVEAMKK 423
T+ + GY Q ++ V K+
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKE 316
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 132 VQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
V +E+A F+ + P+V Y L+N Y ++ + ++M +G+ TI
Sbjct: 549 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 608
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
YN +++ ++ G HEM E GI +K T+SI+L
Sbjct: 609 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 648
>gi|30681109|ref|NP_179664.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|22655188|gb|AAM98184.1| unknown protein [Arabidopsis thaliana]
gi|30023806|gb|AAP13436.1| At2g20720 [Arabidopsis thaliana]
gi|330251967|gb|AEC07061.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 299
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 28/290 (9%)
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS--DGEGIDKIVAMMEA 250
M+ +Y+Q ++ + L+ EM+EK + F LL++ + AS D +G++K ++ E
Sbjct: 1 MLCLYHQAEDHDMVVKLLGEMDEKKMQPQGLCFVKLLTSYSMASVVDVQGVEKFLSKWEV 60
Query: 251 DRGVVLD-WTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN 309
++ D WT + Y++AG +K LA+LR+SE + Y ++T Y
Sbjct: 61 ---MIQDKWTTFYFPGLVYIRAGFMEKGLALLRRSETFVDDGCREIIYGCLMTVYCNENL 117
Query: 310 KDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHL 369
+DV R+W K ++ I G + + EEW N C ++ + +
Sbjct: 118 TEDVYRLWNLAKDYGISFDSSRCSDIVKAFTKKG--DLDGVMEEW---NECPNLDLMDFG 172
Query: 370 IDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA--TGYLQNNQSEKGVEAMKKALVL 427
+ C + K ++ K + + W +A L ++ K E K+
Sbjct: 173 LQHRCVKEEAEKVVDMLGKKESK--------WESLAHKVNTLVEDEDAKEEERRKRVAEA 224
Query: 428 LEA--GTRWKPSKECLA----ACLGYYKKERDIEGADYFIKLLTGKEIIS 471
+E RW P K +A AC+ Y + RD+E ++LL +E +S
Sbjct: 225 MEGRLHDRWNP-KNSMALSAFACVQYVEGRRDMESTADILRLLNKREQVS 273
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 115/269 (42%), Gaps = 44/269 (16%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVK-KTIDYNSMMNVYYQTGNYKKLDSLMHEMEE 215
AL+++ A+ +AE + + G +K +T YN+++ Y + G+ K + ++ EM +
Sbjct: 261 ALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQ 320
Query: 216 KGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
G+ D+ T+S+L+ A A E ++ MEAD GV V++ +G+ G
Sbjct: 321 CGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD-GVKPSSYVFSRILAGFRDRGEWQ 379
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-YICV 334
KA AVLR+ MH A G + D R+ N+ + G Y C+
Sbjct: 380 KAFAVLRE-----MH---------------ASGVRPD------RHFYNVMIDTFGKYNCL 413
Query: 335 ISSLLKFDGM--ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
++ FD M E E W N LIDA+C+ G H ++
Sbjct: 414 GHAMDAFDRMREEGIEPDVVTW------------NTLIDAHCKGG-RHDRAIELFDEMRE 460
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
P T Y + L Q +GVEAM
Sbjct: 461 SNCPLGTTTYNIMINLLGEEQRWEGVEAM 489
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 111/270 (41%), Gaps = 5/270 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ALL Y S + AE ++ +M G+ Y+ +++ Y + G ++ L+ EME
Sbjct: 295 YNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEME 354
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
G+ Y FS +L+ + + ++ M A GV D Y + K
Sbjct: 355 ADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHAS-GVRPDRHFYNVMIDTFGKYNCL 413
Query: 275 DKAL-AVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYI 332
A+ A R E + + + ++ +I + G D + ++ ++ N + Y
Sbjct: 414 GHAMDAFDRMREEGIEPDVVT--WNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYN 471
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I+ L + E E + E + + L +I L+D Y R G +A I +
Sbjct: 472 IMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKAD 531
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
G +P+ ++ + Y Q ++ + +K
Sbjct: 532 GLKPSPTMYHALVNAYAQRGLADHALNVVK 561
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P++Y AL+NAYA A+ A +++ MR GL T+ NS++N + + + S++
Sbjct: 537 PTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQ 596
Query: 212 EMEEKGIDCDKYTFSILLSA 231
M+E G+ D T++ L+ A
Sbjct: 597 FMKENGLRPDVITYTTLMKA 616
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 108/251 (43%), Gaps = 17/251 (6%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y L++AY A E A I++++M G+ + ++ ++ + G ++K +++ E
Sbjct: 328 ATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLRE 387
Query: 213 MEEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
M G+ D++ +++++ + G +D M E G+ D + T + K
Sbjct: 388 MHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMRE--EGIEPDVVTWNTLIDAHCKG 445
Query: 272 GLSDKALAV---LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
G D+A+ + +R+S + + Y+ +I + V + K+ V N
Sbjct: 446 GRHDRAIELFDEMRESNCPLG----TTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPN 501
Query: 329 RGYICVISSLLKFDG----MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
I ++L+ G + A E ++ L + + L++AY +RGL A
Sbjct: 502 ---IITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALN 558
Query: 385 LIYKAQLRGTE 395
++ + G E
Sbjct: 559 VVKAMRADGLE 569
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 31/169 (18%), Positives = 75/169 (44%), Gaps = 3/169 (1%)
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV 316
D +++ S + +A L D AL +L ++ + + + S A +I+ + + +
Sbjct: 220 DAPLFSDLISAFARARLPDAALELLASAQAIGLTPR-SNAVTALISSLGSARRVAEAEAL 278
Query: 317 WKRY--KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
+ + +K R Y ++ +K +++AE++ +E + D + L+DAY
Sbjct: 279 FLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYT 338
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
R G A L+ + + G +P+ + + G+ + +K +++
Sbjct: 339 RAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLRE 387
>gi|42570403|ref|NP_850357.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330254930|gb|AEC10024.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 683
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 133/321 (41%), Gaps = 43/321 (13%)
Query: 151 LPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
+P V Y LLN+Y ++ KA+ + MR + YN++++ Y G +
Sbjct: 255 IPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVE 314
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ +ME+ GI + + LL+AC+ + +D +++ ++ RG+ L+ Y +A Y
Sbjct: 315 IFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS-RGINLNTAAYNSAIGSY 373
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
+ A +KA+A+ + K+ +K +
Sbjct: 374 INAAELEKAIALYQSMR-----------------------------------KKKVKADS 398
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+ +IS + A +E E ++ + + ++ AY ++G + +AE++ +
Sbjct: 399 VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ 458
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYY 448
++ G EP+V + M Y N SEK +A + L + G +P +A + +
Sbjct: 459 MKMAGCEPDVIAYTSMLHAY---NASEKWGKACELFLEMEANGI--EPDSIACSALMRAF 513
Query: 449 KKERDIEGADYFIKLLTGKEI 469
K + L+ KEI
Sbjct: 514 NKGGQPSNVFVLMDLMREKEI 534
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 120/313 (38%), Gaps = 46/313 (14%)
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLV 184
R + + + +G+ ++C P+ Y AL+NA+ A A +M M +
Sbjct: 23 RHNWVDQARGLFFEMQKWSCKPDA----ETYDALINAHGRAGQWRWAMNLMDDMLRAAIA 78
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKI 244
YN+++N +GN+++ + +M + G+ D T +I+LS A G K
Sbjct: 79 PSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS---AYKSGRQYSKA 135
Query: 245 VAMMEADRG--VVLDWTVYATAASGYVKAGLSDKALAVLR-------------------- 282
++ E +G V D T + K G S +AL +
Sbjct: 136 LSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM 195
Query: 283 -----KSEVLMMHNKFSR-----------AYDFVITQYAACGNKDDVLRVWKRYKQNLKV 326
K E+ F +Y+ ++ YA G L V KQN +
Sbjct: 196 HLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGII 255
Query: 327 YN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
+ Y C+++S + A+++F ++ N LIDAY G L +A +
Sbjct: 256 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 315
Query: 386 IYKAQLRGTEPNV 398
+ + G +PNV
Sbjct: 316 FRQMEQDGIKPNV 328
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 147 EKLKLP---SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
E L +P VY ++L AY+ +AE I QM+ G I Y SM++ Y + +
Sbjct: 425 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKW 484
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSA 231
K L EME GI+ D S L+ A
Sbjct: 485 GKACELFLEMEANGIEPDSIACSALMRA 512
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 143/344 (41%), Gaps = 43/344 (12%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+ + K + +A SY +P+ P+V Y +++ Y A++ EKA +++M + G
Sbjct: 17 ISCLCKAGMLAEAESYLKRMPQHCA-PNVVSYNIIIDGYCKARNIEKALAFLREMEELGH 75
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
Y+S++ + +TGN K + EM KG + D F++LLS A +
Sbjct: 76 PPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARE 135
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE------------VLMMH- 290
+ M + RG D Y T +G K D+A+ +L + + L+ H
Sbjct: 136 LFRSMNS-RGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHL 194
Query: 291 NKFSR---------------------AYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYN 328
KF+R AY + + G + RV+ ++N+ + +
Sbjct: 195 CKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTD 254
Query: 329 RGYICVISSLLKFDGME-SAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y V+ L K DG A K+ E + + D + LI+ C+ +A+ +
Sbjct: 255 NTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQ 314
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAG 431
+ + RG P V T+ + G L + K +AM+ +L+ G
Sbjct: 315 EMRGRGISPTVVTYNTLLEGLL---STAKLQDAMELTYFMLDQG 355
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 135/316 (42%), Gaps = 22/316 (6%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N A+ +A+ + Q+MR RG+ + YN+++ T + L + M
Sbjct: 293 YSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFML 352
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
++G D ++++++ A D + M D G+VL+ Y G++K
Sbjct: 353 DQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKD-GIVLNTWTYNFMIVGFIKDEAW 411
Query: 275 DKALAVLR-----KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNL 324
A + + K++ + N F+ Y+ +I+ ++ ++ K + +L
Sbjct: 412 SSAWMLFKRMQSGKNDKVPAPNMFT--YEILISSLCKTDQVEEAFKLLSAMRDKGFVPSL 469
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
K++ ++S L + ++ A ++++E N + N L+D RRG + +A+
Sbjct: 470 KIWE----VLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKD 525
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAAC 444
+ + G P+ T+ + G +++ +A K L+ G R P + L
Sbjct: 526 FLKQMTDTGIVPDKFTYDKLVVGLCWQGKAD---QARKLVEELVRDGKR--PENQGLRQL 580
Query: 445 LGYYKKERDIEGADYF 460
LG + D +GA F
Sbjct: 581 LGALCAQGDFQGAYEF 596
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 66/162 (40%), Gaps = 5/162 (3%)
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
M+EA G+ + +Y S KAG+ +A + L++ N S Y+ +I Y
Sbjct: 1 MLEA--GLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVS--YNIIIDGYCK 56
Query: 307 CGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
N + L + ++ Y ++ S K + A +F E ++ DI
Sbjct: 57 ARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVN 116
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
N L+ R +H+A L RG +P+V T+ M G
Sbjct: 117 FNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAG 158
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 124/328 (37%), Gaps = 40/328 (12%)
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
K+ +++AA+ + + LP V Y L+N E+A + +M + L+
Sbjct: 289 CKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDV 348
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS-ACAAASDGEGIDKIVA 246
+ YN+++N + + L+ EM EKG+ + T +I++ C + + I
Sbjct: 349 VSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITK 408
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL----RKS------------EVLMMH 290
M E+ G D Y T +GY KAG +A + RK+ L
Sbjct: 409 MEES--GFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCRE 466
Query: 291 NKFSRAYDF------------------VITQYAACGNKDDVLRVWKRYKQNLKVYNR-GY 331
K AY +I Y GN D L++W K+ + + Y
Sbjct: 467 KKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTY 526
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
C+I L + E A E L D N ++ YCR G + KA K
Sbjct: 527 NCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+P+V T ++ G EK ++
Sbjct: 587 NSFKPDVFTCNILLRGLCMEGVLEKALK 614
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 115/281 (40%), Gaps = 39/281 (13%)
Query: 147 EKLKLPSVYI-ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
+ +K+ SV + +L K E+A ++ R RG + Y +++ Y++ GN +
Sbjct: 447 KNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDR 506
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATA 264
L EM+EK I T++ ++ C + I K+ ++E+ G++ D T Y T
Sbjct: 507 ALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES--GLLPDETTYNTI 564
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNL 324
GY + G +KA K M+ N F K DV
Sbjct: 565 LHGYCREGDVEKAFQFHNK----MVENSF----------------KPDVFTC-------- 596
Query: 325 KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
+ RG +C+ L E A K+F W S+ D N LI + C+ G L A
Sbjct: 597 NILLRG-LCMEGVL------EKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFN 649
Query: 385 LIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
L+ + + + P+ T+ + T + + + E M K L
Sbjct: 650 LLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKML 690
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 157/387 (40%), Gaps = 21/387 (5%)
Query: 82 DMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LDLIAKVQGIEQAA 139
++ I+I + L +F A++ M K + +P +V LD + K + A
Sbjct: 207 NVNTFNIVIYGYCLENKFKDAVEFLNVMGK---YNCSPDNVTYNTILDTLCKKGRLGDAR 263
Query: 140 SYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVY 197
+ + LP+ Y L+ Y ++A +++ M L+ YN ++N
Sbjct: 264 DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGL 323
Query: 198 YQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLD 257
G ++ L EME + D +++ L++ C S K++ M +++GV +
Sbjct: 324 CNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM-SEKGVKPN 382
Query: 258 WTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVL 314
+ Y K G D A + K E + FS Y+ +I Y GN +
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKME----ESGFSPDCVTYNTLINGYCKAGNMGEAF 438
Query: 315 RVWKRY-KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAY 373
R ++N+K+ + ++ +L + +E A K+ R D LI Y
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGY 498
Query: 374 CRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTR 433
+ G + +A L + + + P+ T+ + G Q ++E+ + + + LLE+G
Sbjct: 499 FKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNE---LLESGLL 555
Query: 434 WKPSKECLAACLGYYKKERDIEGADYF 460
P + L Y +E D+E A F
Sbjct: 556 --PDETTYNTILHGYCREGDVEKAFQF 580
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 105/263 (39%), Gaps = 16/263 (6%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDR---GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
LLN+ S+ + D G+V +N ++ Y +K ++ M
Sbjct: 175 TLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVM 234
Query: 214 EEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ D T+ +IL + C G+ D ++ M RG++ + Y GY K G
Sbjct: 235 GKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDM--KSRGLLPNRNTYNILVYGYCKMG 292
Query: 273 LSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
+A V+ LM N Y+ +I G ++ ++ + +NLK+
Sbjct: 293 WLKEAANVIE----LMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKL-RDEMENLKLLPD 347
Query: 330 --GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
Y +I+ L++ + A K+ EE + + + N ++ YC+ G + A I
Sbjct: 348 VVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTIT 407
Query: 388 KAQLRGTEPNVRTWYLMATGYLQ 410
K + G P+ T+ + GY +
Sbjct: 408 KMEESGFSPDCVTYNTLINGYCK 430
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 128/344 (37%), Gaps = 44/344 (12%)
Query: 99 FSHALQISMWMTKKSNFVLTPADVAIRL--DLIAKVQGIEQAASYFNCVPEKLKLPSV-- 154
FS + S + + ++ + P V L D+ K + +A + E P+V
Sbjct: 279 FSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVIT 338
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +L++ Y+ +A + M RG Y+ ++N Y + L +EM
Sbjct: 339 YNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMI 398
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+G+ + +++ L+ A ++ M + G + D Y+ G+ K G
Sbjct: 399 HQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTN-GYLPDLCTYSVLLEGFCKQGYL 457
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
KA + R + K NL +Y +
Sbjct: 458 GKAFRLFRAMQ-------------------------------GTYLKPNLVMYT----IL 482
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I S+ K + A K+F E L D++I +I+ C+ GLL +A K + G
Sbjct: 483 IDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGC 542
Query: 395 EPNVRTWYLMATGYLQNNQSEKGV----EAMKKALVLLEAGTRW 434
PN ++ ++ G+LQ+ + V E K V E T W
Sbjct: 543 PPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGTTAW 586
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 135/313 (43%), Gaps = 13/313 (4%)
Query: 127 DLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEI-IMQQMRDRGL 183
D + + I+ A + FN + + LP + + LL+A + A I + +QM GL
Sbjct: 63 DASSSFRNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGL 122
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGID 242
T N ++N + + S++ ++ + G+ TF+ L++ C A + ++
Sbjct: 123 SPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALE 182
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVI 301
M+ RG D Y T +G K G + A +++K EV + + Y +I
Sbjct: 183 LFDDMVA--RGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVT--YSTLI 238
Query: 302 TQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
++ L ++ K + + Y +I L F + A + E S N+
Sbjct: 239 DSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIM 298
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
DI + LID +C+ G + +A+ ++ G EPNV T+ + GY + + VEA
Sbjct: 299 PDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGY---SLQMEVVEA 355
Query: 421 MKKALVLLEAGTR 433
K V++ G +
Sbjct: 356 RKLFDVMITRGCK 368
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 116/277 (41%), Gaps = 17/277 (6%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PSV Y LL A + +A ++ +MR +G + YN ++N + G
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
++ + G D +++ +L AA E ++++ A M ++ + + + +
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM-MEKNCMPNEVTFDMLVRFFC 327
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAY--DFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
+ G+ ++A+ VL E + H + + VI G DD ++ N+ Y
Sbjct: 328 RGGMVERAIQVL---EQMSGHGCAANTTLCNIVINTICKQGRVDDAF----QFLNNMGSY 380
Query: 328 NR-----GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
Y V+ L + + E A+++ +E +N + N I C++GL+ +A
Sbjct: 381 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 440
Query: 383 ETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
LI + G E N+ T+ + G+ + + +E
Sbjct: 441 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 477
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/280 (18%), Positives = 119/280 (42%), Gaps = 10/280 (3%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
NC+P ++ + L+ + E+A +++QM G T N ++N + G
Sbjct: 311 NCMPNEV----TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR 366
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
++ M G D +++ +L A E +++ M + + +
Sbjct: 367 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEM-VRKNCPPNEVTFN 425
Query: 263 TAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK 321
T + GL ++A ++ + SE N + Y+ ++ + G D L ++ Y
Sbjct: 426 TFICILCQKGLIEQATMLIEQMSEHGCEVNIVT--YNALVNGFCVQGRVDSALELF--YS 481
Query: 322 QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
K Y +++ L + +++A ++ E ++ ++ N L+ +C++GL+ +
Sbjct: 482 MPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDE 541
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
A L+ + G PN+ T+ + G ++ SE+ +E +
Sbjct: 542 AIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELL 581
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 109/270 (40%), Gaps = 18/270 (6%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKS-AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
NC P ++ + +I +L C K E+A ++++QM + G + YN+++N + G
Sbjct: 416 NCPPNEVTF-NTFICIL----CQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG 470
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTV 260
L + M K + T++ LL+ C A + + M++ D +
Sbjct: 471 RVDSALELFYSMPCKP---NTITYTTLLTGLCNAERLDAAAELLAEMLQKD--CAPNVVT 525
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR--AYDFVITQYAACGNKDDVLRVWK 318
+ S + + GL D+A+ ++ E +M H Y+ ++ N ++ L +
Sbjct: 526 FNVLVSFFCQKGLMDEAIELV---EQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLH 582
Query: 319 RYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
N + Y +I L + D +E A K+F + + I N ++ A C+R
Sbjct: 583 GLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRC 642
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
A G PN T+ + G
Sbjct: 643 NTDGAIDFFAYMVSNGCMPNELTYITLIEG 672
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFV-----LTPADVAI 124
L++Q E G +++ ++ F + R AL++ M K N + LT A
Sbjct: 443 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAE 502
Query: 125 RLDLIAKV--QGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKS-AEKAEIIMQQMRDR 181
RLD A++ + +++ +C P V +L ++ C K ++A +++QM +
Sbjct: 503 RLDAAAELLAEMLQK-----DCAPN-----VVTFNVLVSFFCQKGLMDEAIELVEQMMEH 552
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
G I YN++++ + N ++ L+H + G+ D T+S ++
Sbjct: 553 GCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSII 600
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 15/289 (5%)
Query: 107 MWMTKKSNFVLTPADVAIR--LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAY 162
+ M + V +P VA +D K + +A F + ++ P + Y ++++A
Sbjct: 207 LRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHAL 266
Query: 163 ACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDK 222
A++ +KAE ++QM ++G++ YN+++ Y TG +K+ + EM + I D
Sbjct: 267 CKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDV 326
Query: 223 YTFSILL-SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL 281
+ L+ S C E D M A +G D Y +GY G L +
Sbjct: 327 VALNTLMGSLCKYGKIKEARDVFDTM--AMKGQNPDVFSYTIMLNGYATKG----CLVDM 380
Query: 282 RKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISS 337
LM+ + + ++ +I YA CG D + ++ + +K + Y+ VI++
Sbjct: 381 TDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAA 440
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
L + M+ A + F + + + D + LI +C G L KA+ LI
Sbjct: 441 LCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELI 489
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 146/363 (40%), Gaps = 49/363 (13%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
L Q V +G D +I + ++ A+++ M ++S + P VA+ +
Sbjct: 278 FLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS---ILPDVVALNTLMG 334
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+ K I++A F+ + K + P V Y +LN YA + M G+
Sbjct: 335 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAP 394
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKI 244
+N ++ Y G K + +EM + G+ T+ +++A C + ++K
Sbjct: 395 VICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKF 454
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL--MMHNKFSRAYDFVIT 302
M+ D+GVV D Y G+ G ++L+ E++ +M+N
Sbjct: 455 NQMI--DQGVVPDKYAYHCLIQGFCTHG------SLLKAKELISEIMNN----------- 495
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
G + D++ +I++L K + A+ IF+ + L D
Sbjct: 496 -----GMRLDIVFFGS---------------IINNLCKLGRVMDAQNIFDLTVNVGLHPD 535
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ N L+D YC G + KA + G EPNV + + GY + + ++G+ +
Sbjct: 536 AVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFR 595
Query: 423 KAL 425
+ L
Sbjct: 596 EML 598
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 125/305 (40%), Gaps = 53/305 (17%)
Query: 116 VLTPADV--AIRLDLIAKVQGIEQAASYFN-CVPEKLKLPSVYIA-LLNAYACAKSAEKA 171
VL+P AI +D + E A ++F + L++ ++ + LL + AK ++A
Sbjct: 108 VLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA 167
Query: 172 -EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDC--DKYTFSIL 228
+I++ + + G V YN ++ G + D L+ M E G C D ++ +
Sbjct: 168 LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTV 227
Query: 229 LSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
+ D + D M++ RG+ D Y++ KA DKA A LR+
Sbjct: 228 IDGFFKEGDVNKACDLFKEMVQ--RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQ---- 281
Query: 288 MMHNKF----SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDG 343
M NK + Y+ +I Y++ G WK
Sbjct: 282 -MVNKGVLPDNWTYNNLIYGYSSTGQ-------WKE------------------------ 309
Query: 344 MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYL 403
A ++F+E +++ D+ N L+ + C+ G + +A + ++G P+V ++ +
Sbjct: 310 ---AVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTI 366
Query: 404 MATGY 408
M GY
Sbjct: 367 MLNGY 371
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 111/271 (40%), Gaps = 5/271 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ L+ AYA +KA II +MRD G+ + Y +++ + G ++M
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458
Query: 215 EKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
++G+ DKY + L+ C S + + I +M + G+ LD + + + K G
Sbjct: 459 DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIM--NNGMRLDIVFFGSIINNLCKLGR 516
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYI 332
A + + + +H + Y+ ++ Y G + LRV+ ++ GY
Sbjct: 517 VMDAQNIFDLTVNVGLHPD-AVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYG 575
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+++ K ++ +F E + + + N +ID G A+ ++
Sbjct: 576 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES 635
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
G N T+ ++ G +N ++ + K+
Sbjct: 636 GIAMNKCTYSIVLRGLFKNRCFDEAIFLFKE 666
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 8/206 (3%)
Query: 223 YTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL- 281
YT++IL+ C A E + G+ +D + + G+ +A +D+AL +L
Sbjct: 114 YTYAILMDCCTRAHRPELALAFFGQL-LRTGLRVDAIIASHLLKGFCEAKRTDEALDILL 172
Query: 282 -RKSEVLMMHNKFSRAYDFVI---TQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISS 337
R E+ + + FS Y+ ++ G DD+LR+ Y VI
Sbjct: 173 HRTPELGCVPDVFS--YNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
K + A +F+E R + D+ + ++ A C+ + KAE + + +G P+
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290
Query: 398 VRTWYLMATGYLQNNQSEKGVEAMKK 423
T+ + GY Q ++ V K+
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKE 316
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 98/240 (40%), Gaps = 22/240 (9%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY L++ Y EKA + M G+ + Y +++N Y + G + SL EM
Sbjct: 538 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME-ADRGVVLDWTVYATAASGYVKAG 272
+KGI ++I++ A G + V E + G+ ++ Y+ G K
Sbjct: 598 LQKGIKPSTILYNIIIDGLFEA--GRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNR 655
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-- 330
D+A+ + + E+ M+ K +IT RV + + G
Sbjct: 656 CFDEAIFLFK--ELRAMNVKID-----IITLNTMIAGMFQTRRVEEAKDLFASISRSGLV 708
Query: 331 -----YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL 385
Y +I++L+K +E AE +F ++ D R+ NH++ R LL K E +
Sbjct: 709 PCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV-----RELLKKNEIV 763
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 132 VQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
V +E+A F+ + P+V Y L+N Y ++ + ++M +G+ TI
Sbjct: 549 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 608
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
YN +++ ++ G HEM E GI +K T+SI+L
Sbjct: 609 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 648
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 117/267 (43%), Gaps = 36/267 (13%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y L++ + + ++ E + ++M ++G+ Y ++N + GN K+ +L E
Sbjct: 2 ATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDE 61
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ EKG+ + +T+ L+ A + E + +V M+ RG+ ++ +Y T GY K G
Sbjct: 62 LTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQT-RGLDVNQLIYNTLIDGYCKRG 120
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYI 332
L D+A V +V+M F ++D+ Y N
Sbjct: 121 LIDEAFKV----QVIMEKKGF----------------ENDI------YTLN--------- 145
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+ L K + E A++ + + ++ LID YC+ G +A+ L + +
Sbjct: 146 TIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKA 205
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVE 419
G EPN T+ ++ G+ + + ++ E
Sbjct: 206 GGEPNAVTYNVLIDGHSKKGRMKEAYE 232
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 124/290 (42%), Gaps = 46/290 (15%)
Query: 131 KVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
K+ ++A + F+ + EK + +V Y AL++ A E AEI++ +M+ RGL +
Sbjct: 48 KIGNTKRAFALFDELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQL 107
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK-IVAM 247
YN++++ Y + G + + ME+KG + D YT + + + E + ++ M
Sbjct: 108 IYNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTM 167
Query: 248 MEADRGVVLDWTVYATAASGYVKAG---LSDKALAVLRKS---------EVLM-MHNK-- 292
+E +GVV + Y T Y K G + K ++K+ VL+ H+K
Sbjct: 168 IE--KGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKG 225
Query: 293 -----------------FSRAYDFVITQYAAC--GNKDDVLRVWKRYKQ-NLKVYNRGYI 332
F Y + + C G DD + ++ +Q L + Y
Sbjct: 226 RMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYT 285
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
+IS L K E A K+++E L D R+ L+ + LHKA
Sbjct: 286 AIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVSS------LHKA 329
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Query: 295 RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEE 353
Y VI GN ++ + V N Y +I + K ME+AE + E
Sbjct: 37 HVYTVVINWNCKIGNTKRAFALFDELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNE 96
Query: 354 WESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
++R L + I N LID YC+RGL+ +A + + +G E ++ T +A G + NQ
Sbjct: 97 MQTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQ 156
Query: 414 SEKGVEAMKKALVLLEAG 431
E EA + L ++E G
Sbjct: 157 PE---EAKRWLLTMIEKG 171
>gi|218186396|gb|EEC68823.1| hypothetical protein OsI_37392 [Oryza sativa Indica Group]
Length = 1370
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 13/235 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y ++++A +SA +A +I++QM G I +N++M G+ +K + + E
Sbjct: 1068 IYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLMTGLCHEGHVRKAEHFLREA 1127
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ ++ ++ +++ L+ C D +V MM RG D + G V AG
Sbjct: 1128 IRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMM--GRGHTPDVVTFGALIHGLVVAG 1185
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-----YKQNLKVY 327
+AL V K + F + + C K +L K ++N++
Sbjct: 1186 KVSEALIVREK---MTERQVFPDVNIYNVLISGLC--KKRMLPAAKNILEEMLEKNVQPD 1240
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
Y +I ++ + + A KIFE E + +C DI N +I YC+ G++ +A
Sbjct: 1241 EFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEA 1295
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 115/269 (42%), Gaps = 44/269 (16%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVK-KTIDYNSMMNVYYQTGNYKKLDSLMHEMEE 215
AL+++ A+ +AE + + G +K +T YN+++ Y + G+ K + ++ EM +
Sbjct: 261 ALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQ 320
Query: 216 KGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
G+ D+ T+S+L+ A A E ++ MEAD GV V++ +G+ G
Sbjct: 321 CGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD-GVKPSSYVFSRILAGFRDRGEWQ 379
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-YICV 334
KA AVLR+ MH A G + D R+ N+ + G Y C+
Sbjct: 380 KAFAVLRE-----MH---------------ASGVRPD------RHFYNVMIDTFGKYNCL 413
Query: 335 ISSLLKFDGM--ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
++ FD M E E W N LIDA+C+ G H ++
Sbjct: 414 GHAMDAFDRMREEGIEPDVVTW------------NTLIDAHCKGG-RHDRAIELFDEMRE 460
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
P T Y + L Q +GVEAM
Sbjct: 461 SNCPLGTTTYNIMINLLGEEQRWEGVEAM 489
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 111/270 (41%), Gaps = 5/270 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ALL Y S + AE ++ +M G+ Y+ +++ Y + G ++ L+ EME
Sbjct: 295 YNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEME 354
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
G+ Y FS +L+ + + ++ M A GV D Y + K
Sbjct: 355 ADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHAS-GVRPDRHFYNVMIDTFGKYNCL 413
Query: 275 DKAL-AVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYI 332
A+ A R E + + + ++ +I + G D + ++ ++ N + Y
Sbjct: 414 GHAMDAFDRMREEGIEPDVVT--WNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYN 471
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I+ L + E E + E + + L +I L+D Y R G +A I +
Sbjct: 472 IMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKAD 531
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
G +P+ ++ + Y Q ++ + +K
Sbjct: 532 GLKPSPTMYHALVNAYAQRGLADHALNVVK 561
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P++Y AL+NAYA A+ A +++ MR GL T+ NS++N + + + S++
Sbjct: 537 PTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQ 596
Query: 212 EMEEKGIDCDKYTFSILLSA 231
M+E G+ D T++ L+ A
Sbjct: 597 FMKENGLRPDVITYTTLMKA 616
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 108/251 (43%), Gaps = 17/251 (6%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y L++AY A E A I++++M G+ + ++ ++ + G ++K +++ E
Sbjct: 328 ATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLRE 387
Query: 213 MEEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
M G+ D++ +++++ + G +D M E G+ D + T + K
Sbjct: 388 MHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMRE--EGIEPDVVTWNTLIDAHCKG 445
Query: 272 GLSDKALAV---LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
G D+A+ + +R+S + + Y+ +I + V + K+ V N
Sbjct: 446 GRHDRAIELFDEMRESNCPLG----TTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPN 501
Query: 329 RGYICVISSLLKFDG----MESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
I ++L+ G + A E ++ L + + L++AY +RGL A
Sbjct: 502 ---IITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALN 558
Query: 385 LIYKAQLRGTE 395
++ + G E
Sbjct: 559 VVKAMRADGLE 569
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/169 (18%), Positives = 75/169 (44%), Gaps = 3/169 (1%)
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV 316
D +++ S + +A L D AL +L ++ + + + S A +I+ + + +
Sbjct: 220 DAPLFSDLISAFARARLPDAALELLASAQAIGLTPR-SNAVTALISSLGSARRVAEAEAL 278
Query: 317 WKRY--KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
+ + +K R Y ++ +K +++AE++ +E + D + L+DAY
Sbjct: 279 FLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYT 338
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
R G A L+ + + G +P+ + + G+ + +K +++
Sbjct: 339 RAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLRE 387
>gi|255660964|gb|ACU25651.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 376
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 118/262 (45%), Gaps = 24/262 (9%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
+ AE + +++ + + + YN+M+N Y++ K L M +G + +F+I+
Sbjct: 7 DGAERVFKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIM 65
Query: 229 LSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE- 285
+ D +D+++++ E + G V D Y G+ K G DK+L VL +E
Sbjct: 66 MRG---LFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQ 122
Query: 286 ---VLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-----KQNLKVYNRGYICVISS 337
VL + F AY +I N D L V K N+ VYN +I+
Sbjct: 123 KGGVL---DAF--AYSAMINGLCKEANLDRALYVLTGMIKSGCKPNIHVYNT----LING 173
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
L+ E A ++F E + + I N LI C++ + +A L+ + +G +P
Sbjct: 174 LVGASKFEDAIRVFREMGTMHCSPTIITYNTLISGLCKKEMFGEAYNLVKELLDKGLDPG 233
Query: 398 VRTWYLMATGYLQNNQSEKGVE 419
V T+ ++ G +++ E+ ++
Sbjct: 234 VITYSMLMKGLCLDHKVERALQ 255
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/379 (20%), Positives = 155/379 (40%), Gaps = 47/379 (12%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
+ D V++G +D + + + +R L+ M S +T + I ++ +
Sbjct: 157 VFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMVD-SGVKITVYSLTIVVEGL 215
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
+ +E++ K P Y ++NAY + E I++ M+ G+V
Sbjct: 216 CRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNK 275
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS-AC-------------- 232
+ Y ++ + + G ++ L EM E+GI+ D + ++ L+S C
Sbjct: 276 VTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDE 335
Query: 233 --------AAASDGEGIDKIVAMME-----------ADRGVVLDWTVYATAASGYVKAGL 273
++ + G ID + + E +GV + V+ T +GY + G+
Sbjct: 336 LTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGM 395
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGN---KDDVLRVW--KRYKQNLKVYN 328
D+A + +M K +A F A+C N + D + W + + +++
Sbjct: 396 IDEASMIYD-----VMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLST 450
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y +I K +E A+++F E S+ + + N +I AYC++G + +A L
Sbjct: 451 VSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWAN 510
Query: 389 AQLRGTEPNVRTWYLMATG 407
+ G +P+ T+ + G
Sbjct: 511 MKANGMDPDSYTYTSLIHG 529
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Query: 142 FNCVPEKLKLPSV-YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQT 200
F + ++L +V Y L++ Y + E+A+ + +M + + I YN M+ Y +
Sbjct: 439 FRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQ 498
Query: 201 GNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTV 260
G K+ L M+ G+D D YT++ L+ A + + ++ + M +G+ +
Sbjct: 499 GKVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM-GLKGLDQNSVT 557
Query: 261 YATAASGYVKAGLSDKALAV 280
Y SG KAG SD+A +
Sbjct: 558 YTVMISGLSKAGKSDEAFGL 577
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 83/209 (39%), Gaps = 38/209 (18%)
Query: 201 GNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTV 260
G +K L+ E KGI + YT++ +++A D G++KI+ +M+ D GVV +
Sbjct: 219 GEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKD-GVVYNKVT 277
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVLMMHNKF-SRAYDFVITQYAACGNKDDVLRVWKR 319
Y VK G + ++V + ++ R + I Y + L W
Sbjct: 278 YTLLIELSVKNG---------KMNDVEKLFDEMRERGIESDIHVYTS-------LISWNC 321
Query: 320 YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
K N+K R ++ +F+E + L LID C+ G +
Sbjct: 322 RKGNIK---RAFL-----------------LFDELTEKGLLPSSHTYGALIDGVCKVGEM 361
Query: 380 HKAETLIYKAQLRGTEPNVRTWYLMATGY 408
AE L+ + Q +G + + GY
Sbjct: 362 GAAEILMNEMQSKGVNITQVVFNTLINGY 390
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 100/208 (48%), Gaps = 7/208 (3%)
Query: 135 IEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
I++A+ ++ + +K V+ + + + K ++A+ + +M + G+ T+ Y +
Sbjct: 396 IDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTN 455
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+++VY + GN ++ L EM K + + T+++++ A + K+ A M+A+
Sbjct: 456 LIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKAN- 514
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV-LMMHNKFSRAYDFVITQYAACGNKD 311
G+ D Y + G A D+A+ + SE+ L ++ S Y +I+ + G D
Sbjct: 515 GMDPDSYTYTSLIHGECIADNVDEAMRLF--SEMGLKGLDQNSVTYTVMISGLSKAGKSD 572
Query: 312 DVLRVWKRYK-QNLKVYNRGYICVISSL 338
+ ++ K + + N+ Y +I S+
Sbjct: 573 EAFGLYDEIKRKGYTIDNKVYTALIGSM 600
>gi|224058965|ref|XP_002299667.1| predicted protein [Populus trichocarpa]
gi|222846925|gb|EEE84472.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 108/258 (41%), Gaps = 39/258 (15%)
Query: 149 LKLPSV-YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLD 207
L++ S+ Y LL A E+A+ QM+D G Y+S++N Y GNYKK +
Sbjct: 140 LQMDSIMYGTLLAVCASNNRCEEAQSYFNQMKDEGHSPNIFHYSSLLNAYSSDGNYKKAE 199
Query: 208 SLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
L+ +M+ G+ +K + LL
Sbjct: 200 ELVQDMKSSGLVPNKVILTTLLKV------------------------------------ 223
Query: 268 YVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN-LKV 326
YV+ GL +K+ +L + + L K Y ++ A G D+ V+ K+ +K
Sbjct: 224 YVRGGLFEKSRDLLVELDTLGF-AKNEMPYCLLMDGLAKNGLLDEARSVFNEMKEKRVKS 282
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
Y +ISS + E A+++ EE+E++ +D+ I N ++ AYCR G +
Sbjct: 283 GGYSYSIMISSFCRGGLFEEAKELAEEFEAKYDKYDVVILNTILCAYCRTGEKESVMRTM 342
Query: 387 YKAQLRGTEPNVRTWYLM 404
K P+ T++++
Sbjct: 343 RKMDELAISPDYNTFHIL 360
>gi|255661214|gb|ACU25776.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 426
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 137/296 (46%), Gaps = 25/296 (8%)
Query: 97 KRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV-- 154
KRF AL + M ++ +L I +D+ ++ ++A F + + P+V
Sbjct: 128 KRFREALSVFAEM-REIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKMGIEPNVVS 186
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y LL Y A+ +A + + M+ + +V+ + YN+MM +Y +T ++K ++L+ EM+
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKDIVQNVVTYNTMMMIYGKTLEHEKANNLIQEMQ 246
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR--GVVLDWTVYATAASGYVKAG 272
+GI+ + T+S ++S +D+ + + R G+ +D +Y T Y +AG
Sbjct: 247 NRGIEPNSITYSTIISIWGKVGK---LDRAAMLFQKLRVSGIEIDQVLYQTMIVAYERAG 303
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-----KQNLKVY 327
L A +L + L N R D I A G ++ V+++ +++ V+
Sbjct: 304 LVAHAKRLLHE---LKRPNNIPR--DTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVF 358
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
R +IS K+ + ++FE+ D + +++AY G LHK E
Sbjct: 359 ER----MISLFSKYKKYTNVVEVFEKMRGLGYFPDSNVIAVVLNAY---GKLHKFE 407
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 102/247 (41%), Gaps = 17/247 (6%)
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
KA I +++ G+ + YNSM+NV+ + +++ SL+ EM G+ + ++S LL
Sbjct: 62 KAISIFSKLKRSGITPDLVAYNSMINVFGKARLFREARSLISEMRVAGVMPNTVSYSTLL 121
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK---AGLSDKALAVLRKSEV 286
+ + A M + +LD T Y + A +DK +RK +
Sbjct: 122 TMYVENKRFREALSVFAEMREIK-CLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKMGI 180
Query: 287 ---LMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK--QNLKVYNRGYICVISSLLKF 341
++ +N R Y G + R+ +R QN+ YN + +L
Sbjct: 181 EPNVVSYNTLLRVYG----DAELFGEAIHLFRLMQRKDIVQNVVTYNTMMMIYGKTLEH- 235
Query: 342 DGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
E A + +E ++R + + + +I + + G L +A L K ++ G E + +
Sbjct: 236 ---EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRVSGIEIDQVLY 292
Query: 402 YLMATGY 408
M Y
Sbjct: 293 QTMIVAY 299
>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Cucumis sativus]
Length = 481
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 141/312 (45%), Gaps = 27/312 (8%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
+ KV ++A F + + +P+V Y +L++ + CA E+++ + +M D+G+
Sbjct: 173 LCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPN 232
Query: 187 TIDYNSMMNVYYQTGNYKKLDS---LMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGID 242
+ +N ++++ + G L S L M KG + ++ +++IL++ C E ++
Sbjct: 233 LVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMN 292
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYV---KAGLSDKALAVLRKSEVLMMHNKFSRAYDF 299
M + G + Y+T +G + K G ++K V++ S + + + +
Sbjct: 293 LYNEMPQV--GKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISV------DSCIY 344
Query: 300 VITQYAACGNKDDVLRVWKRYKQNLKVYN-----RGYICVISSLLKFDGMESAEKIFEEW 354
VI C K+ VL LK YN Y +I L K +E A + F++
Sbjct: 345 VIFLDGLC--KNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQL 402
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETL---IYKAQLRGTEPNVRTWYLMATGYLQN 411
L ++ N +I +CR + KA L + K + G P++ T+ + G+ ++
Sbjct: 403 SQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCES 462
Query: 412 NQSEKGVEAMKK 423
N+ E+ V + K
Sbjct: 463 NKLEEVVNLLHK 474
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 119/273 (43%), Gaps = 29/273 (10%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
++A+ I ++M+ +G++ I Y+S+++ + G ++ L +EM ++G+ + F++L
Sbjct: 180 DEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVL 239
Query: 229 LSA-CAAASDGE--GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
+ C G+ K+ M + +G + Y +GY K + + E
Sbjct: 240 IDILCKEGKIGDLSSARKLFLSMPS-KGCEHNEISYTILINGYCK---------IWKVEE 289
Query: 286 VLMMHNKFS--------RAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVIS 336
+ ++N+ + Y ++T G D +++ K + V + Y+ +
Sbjct: 290 AMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLD 349
Query: 337 SLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEP 396
L K + A ++F E +S N D + LID C+ G + A + G +P
Sbjct: 350 GLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQP 409
Query: 397 NVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE 429
NV T +M G+ + VE + KA +L E
Sbjct: 410 NVVTCNIMIHGFCR-------VEQVDKANILFE 435
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 118/276 (42%), Gaps = 9/276 (3%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PSV Y LL+A +A ++ +MR +G + YN ++N G+ + ++
Sbjct: 284 PSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNI 343
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
+ + G D T++ +L + + + +++++A M ++ D + T +
Sbjct: 344 LSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNN-CAPDEVTFNTIVTSLC 402
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSR--AYDFVITQYAACGNKDDVLRVWKRYKQ-NLKV 326
+ GL D+A+ V+ + + H + Y ++ G DD + + R K K
Sbjct: 403 QQGLVDRAIEVV---DHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKP 459
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
Y V+ L + E AE++ E + D N ++ + C++GL+ +A ++
Sbjct: 460 DTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVV 519
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ G P++ T+ + G + + +E +
Sbjct: 520 EQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLS 555
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 123/291 (42%), Gaps = 27/291 (9%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKS-AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
NC P+++ ++ +L C + ++A ++ M + G V + Y+S+++ G
Sbjct: 386 NCAPDEVTFNTIVTSL-----CQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVG 440
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA-MMEADRGVVLDWTV 260
L+ ++ G D ++ +L + E ++++A M+ +D D
Sbjct: 441 RVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSD--CPPDEVT 498
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVW 317
+ T + + GL D+A+ V+ + M N S Y+ +I DD + +
Sbjct: 499 FNTVVASLCQKGLVDRAIRVVEQ----MSENGCSPDIVTYNCIIDGLCNESCIDDAMELL 554
Query: 318 KRY-----KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
K ++ +N ++ L D E AE++ N D N +I +
Sbjct: 555 SDLQSCGCKPDIVTFNT----LLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITS 610
Query: 373 YCRRGLLHKA-ETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
C++GLL +A ETL A+ G PN T+ ++ L+ +++ +E +
Sbjct: 611 LCQKGLLTQAIETLKIMAE-NGCVPNSSTYSIVVDALLKAGKAQAALELLS 660
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 113/287 (39%), Gaps = 23/287 (8%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKS-AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
+C P+++ +V +L C K ++A +++QM + G + YN +++
Sbjct: 491 DCPPDEVTFNTVVASL-----CQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNES 545
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA-MMEADRGVVLDWTV 260
L+ +++ G D TF+ LL E ++++A MM ++ D
Sbjct: 546 CIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSN--CPPDELT 603
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAACGNKDDVLRVW 317
+ T + + GL +A+ L+ +M N S Y V+ G L +
Sbjct: 604 FNTVITSLCQKGLLTQAIETLK----IMAENGCVPNSSTYSIVVDALLKAGKAQAALELL 659
Query: 318 KRYKQ---NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
+L YN VIS+L K ME A + S LC D L C
Sbjct: 660 SGMTNGTPDLITYNT----VISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVC 715
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
R +A ++ + Q G P+ + + G+ ++ +++ ++
Sbjct: 716 REDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCF 762
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 105/283 (37%), Gaps = 24/283 (8%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y ++N Y A E A ++ M T +N ++ G ++ +M
Sbjct: 221 TYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDALAVFDDM 277
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR--GVVLDWTVYATAASGYVKA 271
+G T+SILL A S G + +A+++ R G D Y +
Sbjct: 278 LHRGCSPSVVTYSILLDATCKES---GYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNE 334
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ--------N 323
G D+AL +L L H A + + CG++ WK ++ N
Sbjct: 335 GDVDEALNILSN---LPSHGCKPDAVTYTPVLKSLCGSER-----WKEVEELLAEMTSNN 386
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
+ +++SL + ++ A ++ + DI + ++D C G + A
Sbjct: 387 CAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAV 446
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
L+ + + G +P+ + + G Q E+ E M + L
Sbjct: 447 ELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLC 489
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 94/244 (38%), Gaps = 8/244 (3%)
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEG 240
G + YN+M+N Y + G + L++ M D +TF+ L+ A C +
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLINGMPFPP---DTFTFNPLIRALCVRGRIPDA 270
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
+ M+ RG Y+ K +A+A+L + Y+ +
Sbjct: 271 LAVFDDMLH--RGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIV-TYNVL 327
Query: 301 ITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
I G+ D+ L + + K Y V+ SL + + E++ E S N
Sbjct: 328 INAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNC 387
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
D N ++ + C++GL+ +A ++ G ++ T+ + G + + VE
Sbjct: 388 APDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVE 447
Query: 420 AMKK 423
+ +
Sbjct: 448 LLSR 451
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 130/318 (40%), Gaps = 11/318 (3%)
Query: 115 FVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAE 172
F + I L+ + K+ A + ++ P V Y +++ K ++A
Sbjct: 111 FQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAY 170
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+ +M RG+ I Y +++ + G + L++EM K I+ + YT++ L+
Sbjct: 171 DLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTL 230
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA---LAVLRKSEVLMM 289
+ ++A+M +GV D +Y+ GY G KA V+ ++ V
Sbjct: 231 CKEGKVKESKNLLAVM-TKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGV--- 286
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAE 348
N +Y+ +I D+ + + + +N+ Y +I L K + +
Sbjct: 287 -NPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTIL 345
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+ +E R ++ N L+D C+ L KA L K + RG +PN T+ + G
Sbjct: 346 DLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGL 405
Query: 409 LQNNQSEKGVEAMKKALV 426
+ + +KG + LV
Sbjct: 406 CKGGRLKKGQALFQHLLV 423
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/273 (17%), Positives = 122/273 (44%), Gaps = 15/273 (5%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P++Y L++ ++++ ++ M +G+ + Y+ +M+ Y G +K +
Sbjct: 218 PNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQI 277
Query: 210 MHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
M + G++ D Y+++I+++ C E ++ + M+ + ++ D Y++ G
Sbjct: 278 FLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLH--KNMIPDTVTYSSLIDGL 335
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRA----YDFVITQYAACGNKDDVLRVWKRYKQ-N 323
K G L + ++ MH++ A Y+ ++ N D + ++ + K+
Sbjct: 336 CKLGRITTILDLTKE-----MHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERG 390
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
++ Y +I L K ++ + +F+ + C D+ +I C+ G+ +A
Sbjct: 391 IQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEAL 450
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ K + G PN T+ ++ L+ ++++K
Sbjct: 451 AMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDK 483
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 106/244 (43%), Gaps = 13/244 (5%)
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRD 180
+I +D V +++A F + + P VY ++N K ++A ++++M
Sbjct: 259 SILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLH 318
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
+ ++ T+ Y+S+++ + G + L EM +G + T++ LL +
Sbjct: 319 KNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDG---LCKNQN 375
Query: 241 IDKIVA--MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYD 298
+DK +A M +RG+ + Y G K G K A+ + L++ +
Sbjct: 376 LDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQH---LLVKGYCIDVWT 432
Query: 299 FVITQYAAC--GNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWE 355
+ + C G D+ L + + + N + N + +I SLL+ D + AEK+ E
Sbjct: 433 YTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMI 492
Query: 356 SRNL 359
++ L
Sbjct: 493 AKGL 496
>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
Length = 1161
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 150/347 (43%), Gaps = 30/347 (8%)
Query: 82 DMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LDLIAKVQGIEQAA 139
D+ I+I K KR + A + M K LTP + ++ + I A
Sbjct: 294 DVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDD---LTPDECTYNTLINGFFREGKINHAR 350
Query: 140 SYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVY 197
FN + + +PSV Y +++ Y + +KA I+ +M+ G++ + Y++++N Y
Sbjct: 351 YVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGY 410
Query: 198 YQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLD 257
+ LM +++ +GI +K +IL+ + +I+ M D G+ D
Sbjct: 411 CKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFED-GIDPD 469
Query: 258 WTVYATAASGYV---KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVL 314
Y+ +G K + + L+ ++KS +L Y +I Y G + L
Sbjct: 470 VITYSALINGMCRMAKMHETKEILSRMQKSGIL----PNDVLYTTLICYYCKAGYVKEAL 525
Query: 315 RVWKRYKQNLKVYNRGYIC--VISSLLKF----DGMESAEKIFEEWESR-NLCHDIRIPN 367
K + +Y RG + VI + L +GM + + F ++ SR N+ D N
Sbjct: 526 ------KHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFN 579
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLR-GTEPNVRTWYLMATGYLQNNQ 413
+ID+YC RG + A + +Y +R G PNV T+ + G Q
Sbjct: 580 RIIDSYCHRGNIVGAFS-VYDDMVRYGYSPNVCTYQNLLRGLCQGGH 625
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 167/427 (39%), Gaps = 54/427 (12%)
Query: 89 IIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEK 148
+I F + +HA + M ++ N V + A +D + + I++A S + +
Sbjct: 336 LINGFFREGKINHARYVFNHMLRQ-NLVPSVATYTTMIDGYCRNRRIDKALSILSEMQIT 394
Query: 149 LKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKL 206
+PS Y ALLN Y A +M+ ++ RG+ +++ + Q G K
Sbjct: 395 GVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKA 454
Query: 207 DSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAAS 266
++ M E GID D T+S L++ + +I++ M+ G++ + +Y T
Sbjct: 455 KQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKS-GILPNDVLYTTLIC 513
Query: 267 GYVKAGLSDKALA----VLRKSEVL--MMHNKF--------------------------- 293
Y KAG +AL + R+ V ++HN
Sbjct: 514 YYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISF 573
Query: 294 -SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFE 352
S +++ +I Y GN ++ + Y ++ +C +LL+ G+ + +
Sbjct: 574 DSVSFNRIIDSYCHRGN---IVGAFSVYDDMVRYGYSPNVCTYQNLLR--GLCQGGHLVQ 628
Query: 353 EWESRNLCHDIRIP------NHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
+ + DI N L+ CR G L +A L K P++ T+ ++ +
Sbjct: 629 ARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLS 688
Query: 407 GYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTG 466
G+ + K + A+ ++LE G P L E ++ A Y +
Sbjct: 689 GFCRKG---KILPALVILQMMLEKGV--VPDTVAYTCLLNGLINEGQVKAASYVFHEIIC 743
Query: 467 KEIISAD 473
KE + AD
Sbjct: 744 KEGLYAD 750
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 110/264 (41%), Gaps = 30/264 (11%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
LLN+ KAE ++Q+M+ + ++ YN++++ Y + G +K ++ +ME
Sbjct: 232 LLNSLCTNGEFRKAEDMLQKMKSCH-ISNSVTYNTILHWYVKKGRFKAALCVLEDMERDS 290
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVL-----------DWTVYATAAS 266
+ D YT++I+ IDK+ + + R +L D Y T +
Sbjct: 291 VQADVYTYNIM------------IDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLIN 338
Query: 267 GYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK--DDVLRVWKRYK-QN 323
G+ + G + A V ++ N + C N+ D L + +
Sbjct: 339 GFFREGKINHARYVFNH---MLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITG 395
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
+ Y +++ K + A + E+ +SR + + + LID +C+ G + KA+
Sbjct: 396 VMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAK 455
Query: 384 TLIYKAQLRGTEPNVRTWYLMATG 407
++ G +P+V T+ + G
Sbjct: 456 QILKSMFEDGIDPDVITYSALING 479
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 109/277 (39%), Gaps = 11/277 (3%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V+ L+ AY + A + + M D G + N+++N + G K + + E
Sbjct: 158 VFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWLFLRES 217
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ T +ILL++ + + ++ M++ + + Y T YVK G
Sbjct: 218 LARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCH--ISNSVTYNTILHWYVKKGR 275
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-KQNLKVYNRGYI 332
AL VL E + Y+ +I + + KR K +L Y
Sbjct: 276 FKAALCVLEDMERDSVQADVY-TYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYN 334
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I+ + + A +F +NL + +ID YCR + KA +++ + Q+
Sbjct: 335 TLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQIT 394
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE 429
G P+ T+ + GY + V + A+ L+E
Sbjct: 395 GVMPSELTYSALLNGYCK-------VSMLGPAIYLME 424
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 147/349 (42%), Gaps = 23/349 (6%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D + L ++ ++ D+ I++ F + AL I M +K + P VA
Sbjct: 662 DEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKG---VVPDTVAY 718
Query: 125 RLDLIAKV-QGIEQAASY-FNCVPEKLKLPS---VYIALLNAYACAKSAEKAEIIMQQMR 179
L + +G +AASY F+ + K L + Y +L+N Y +++ + +M M
Sbjct: 719 TCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMY 778
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL---LSACAAAS 236
+ + YN +M+ Y + G + K L M KGI D T+ +L LS C
Sbjct: 779 QNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGL-- 836
Query: 237 DGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
ID V +E G+ D V+ + + + AL V + L M + S
Sbjct: 837 ----IDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHM-SPSS 891
Query: 295 RAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEE 353
+ + +I G D +V Q L+ + YI ++++ + ++ A ++ EE
Sbjct: 892 KTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEE 951
Query: 354 WESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR-GTEPNVRTW 401
++ + + +I CR G L +A +++ + +R G P V T+
Sbjct: 952 MKAIGIVPAEVAESSIIRGLCRCGKLEEA-VIVFSSMMRSGMVPTVATF 999
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 127/288 (44%), Gaps = 19/288 (6%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
++K Q +++A V + +P+ Y ++++ Y + +EKA I ++M G+
Sbjct: 56 LSKAQAMDRAME----VLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPD 111
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVA 246
+ YNS+M+ + G + + M ++G+ D T+ LL A+ + ++A
Sbjct: 112 VVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLA 171
Query: 247 MMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYA 305
+M G+ LD V+ Y K D+ + V K + + N + Y VI
Sbjct: 172 LM-VQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVN--YRTVIDGLC 228
Query: 306 ACGNKDDVL-----RVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
G DD + + K N+ VY +I +L +D E AE++ E + +
Sbjct: 229 KLGRLDDAMLNFEQMIDKGLTPNVVVYTS----LIHALCTYDKWEKAEELIFEILDQGIN 284
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+I N ++D+ C+ G + +++ L G P+V T+ + GY
Sbjct: 285 PNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGY 332
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 8/223 (3%)
Query: 67 MVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR- 125
M LL V+ G LD I+I + ++ + + M ++ LTP V R
Sbjct: 166 MHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQG---LTPNAVNYRT 222
Query: 126 -LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRG 182
+D + K+ ++ A F + +K P+V Y +L++A EKAE ++ ++ D+G
Sbjct: 223 VIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQG 282
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGID 242
+ + +N++++ + G + L + G++ D T+S L+ A +G
Sbjct: 283 INPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAM 342
Query: 243 KIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
K++ M G+ D Y+T +GY K + ALA+ ++ E
Sbjct: 343 KLLTGM-VSVGLKPDSVTYSTLINGYCKINRMEDALALFKEME 384
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 92/236 (38%), Gaps = 40/236 (16%)
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
+ YN++++ ++ G+ K HEM ++ + D T++ S AA S + +D+ AM
Sbjct: 12 VSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYN---SIIAALSKAQAMDR--AM 66
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAAC 307
V+ + Y + GY +G S+KA+ + RK +
Sbjct: 67 EVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRK--------------------MCSD 106
Query: 308 GNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
G + DV+ YN ++ L K A KIF+ R L DI
Sbjct: 107 GIEPDVV-----------TYNS----LMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYG 151
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
L+ Y +G L + L+ G + + + ++ Y + + ++ V K
Sbjct: 152 TLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSK 207
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 134/332 (40%), Gaps = 43/332 (12%)
Query: 88 IIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPE 147
I+I +F R A + M+ K L + + K + ++ A + F +
Sbjct: 447 ILIDRFCKEGRLEEARNVLDEMSGKG-LALNAVGYNCLISALCKDEKVQDALNMFGDMSS 505
Query: 148 KLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
K P ++ +L+ E+A + Q M G++ TI YN++++ + + G ++
Sbjct: 506 KGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQE 565
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYAT 263
L+++M +G D T++ L+ A A + I+K +A+ E +G+ +
Sbjct: 566 ALKLVNDMLFRGCPLDDITYNGLIKALCRAGN---IEKGLALFEDMMSKGLNPNNISCNI 622
Query: 264 AASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN 323
+G + G AL LR M+H + +
Sbjct: 623 LINGLCRTGNIQHALEFLRD----MIHRGLT---------------------------PD 651
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
+ YN +I+ L K + A +F++ + +C D N LI +C+ G+ A
Sbjct: 652 IVTYNS----LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAH 707
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
L+ + G PN TWY++ + +++ E
Sbjct: 708 LLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 108/275 (39%), Gaps = 40/275 (14%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y L++ + E+A ++ +M +GL + YN +++ + + ++
Sbjct: 440 PNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNM 499
Query: 210 MHEMEEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+M KG D +TF S++ C E + M+ GV+ + Y T +
Sbjct: 500 FGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLL--EGVIANTITYNTLIHAF 557
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
++ G +AL ++++ R DD+ YN
Sbjct: 558 LRRGAMQEALK--------LVNDMLFRGCPL-----------DDI------------TYN 586
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+I +L + +E +FE+ S+ L + N LI+ CR G + A +
Sbjct: 587 G----LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRD 642
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
RG P++ T+ + G + ++++ + K
Sbjct: 643 MIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDK 677
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 124/305 (40%), Gaps = 50/305 (16%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI-DYNSMMNVYYQTGNYKKLDSLMH 211
S++I ++ Y A +A ++ MR + T YN +++V K + ++ +
Sbjct: 165 SLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFY 224
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYV 269
EM KGI YTF +++ A ++ +D A+++ G V + VY T
Sbjct: 225 EMLSKGISPTVYTFGVVMKALCLVNE---VDSACALLKDMTRHGCVPNAIVYQTLIHALS 281
Query: 270 KAGLSDKALA--------------------------VLRKSEV------LMMHNKFSRAY 297
K G ++ L +LR E +++ ++
Sbjct: 282 KVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSF 341
Query: 298 DFVITQYAAC--GNKDDV-LRVWKRYKQNLKVYN---RGYICVISSLLKFDGMESAEKIF 351
+ + + C G D+ + + K N+ ++N GY+ S + D E+ +
Sbjct: 342 TYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYV----SRGRLD--EAKAVMH 395
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
E S DI N LI C++G L A L+ + Q++G EPNV T+ ++ + +
Sbjct: 396 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 455
Query: 412 NQSEK 416
+ E+
Sbjct: 456 GRLEE 460
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 110/272 (40%), Gaps = 22/272 (8%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
E A + M+++G Y ++++ +G K L H M G+ + T++ L
Sbjct: 507 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 566
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM 288
++ + ++ +M G+ + Y GY G KA+ L+
Sbjct: 567 INILVENRRIKYAFVVLNLM-GRNGLFTNIVTYNEMIKGYCILGDPKKAM--------LV 617
Query: 289 MHNKFSRA-------YDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLK 340
M+N R Y+ +I Y GN LR+ + K Y +I K
Sbjct: 618 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 677
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
MESA +F E LC + LID YC+ L A +L+ + G PNV+T
Sbjct: 678 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 737
Query: 401 WYLMATGYL-QNNQSEKGVEAMKKALVLLEAG 431
+ ++ G QNN S G E + K V++E G
Sbjct: 738 YNVLIHGLTKQNNFS--GAEELCK--VMIEEG 765
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 108/269 (40%), Gaps = 13/269 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y AL+N + + A +++ M GL + YN M+ Y G+ KK +M+ M
Sbjct: 562 TYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNM 621
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
++G + T++ ++ + + +I+ +M D G D Y G+ K
Sbjct: 622 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR-DGGCKPDEWSYTELICGFCKISK 680
Query: 274 SDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVY 327
+ A + + + + N+ + Y +I Y D + + K+ N++ Y
Sbjct: 681 MESAFGLFNEMVDDGLCPNEVT--YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 738
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
N +I L K + AE++ + + ++ +ID C+ G A +
Sbjct: 739 N----VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 794
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
K +G PN+ T+ + Q + E+
Sbjct: 795 KMIEQGCLPNLLTYSSLIRALGQEGKVEE 823
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/238 (17%), Positives = 93/238 (39%), Gaps = 36/238 (15%)
Query: 176 QQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAA 235
+M G+ + YN+++N + GN +++M ++ E + D +T++ ++
Sbjct: 374 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 433
Query: 236 SDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR 295
D + ++ M A G + Y+T +G +G ++A ++R+ +++H
Sbjct: 434 HDLDSALQVFNQM-AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIRE---MILHGILPT 489
Query: 296 AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWE 355
A+ A C ++ Y E A ++F + +
Sbjct: 490 AHTCTGPIIALC---------------DMGCY-----------------EDAWRLFVDMK 517
Query: 356 SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
++ ++ LI C GLL A L ++ G PN T+ + ++N +
Sbjct: 518 NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 575
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 120/266 (45%), Gaps = 7/266 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY +L++ ++A ++M RG+ YNS+++ + G +K++ ++ M
Sbjct: 1122 VYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLM 1181
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
++G D +TF+IL+ C GE +I+ +M +G D Y T +G G
Sbjct: 1182 VDRGFSPDAFTFTILIDGLCKEGKVGEA-QQILELMR-HKGKEPDILTYNTLMNGLCLVG 1239
Query: 273 LSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRG 330
+ A + ++ + N FS Y+ +I Y D+ R ++ + + LK
Sbjct: 1240 QLEDATKLFESLADRGIKLNVFS--YNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVT 1297
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I +L + + +A+K+F E ++ + L+D C+ G L +A L +
Sbjct: 1298 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIK 1357
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEK 416
+PN+ + ++ G + + E+
Sbjct: 1358 KTEHKPNIEVFSILLDGMCRAGKLEE 1383
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/306 (19%), Positives = 122/306 (39%), Gaps = 44/306 (14%)
Query: 123 AIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRD 180
I +D + K + +A + K K P + Y L+N E A + + + D
Sbjct: 1194 TILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLAD 1253
Query: 181 RGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
RG+ YN ++N Y + + EM KG+ T++ L+ A +
Sbjct: 1254 RGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRT 1313
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAV---LRKSEVLMMHNKFSRAY 297
K+ M+ G L + Y G K G ++A+ + ++K+E
Sbjct: 1314 AQKLFVEMQT-CGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTE------------ 1360
Query: 298 DFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
+K N++V++ ++ + + +E A K F+E
Sbjct: 1361 ----------------------HKPNIEVFS----ILLDGMCRAGKLEEAWKQFDEISKN 1394
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
L D N LI+ C +G+L +A L+++ + +G P+ T+ ++ L+ N+ +
Sbjct: 1395 GLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEA 1454
Query: 418 VEAMKK 423
++ +++
Sbjct: 1455 IQLLEE 1460
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 97/218 (44%), Gaps = 5/218 (2%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N Y + ++A ++MR +GL T+ YN+++ Q+G + L EM+
Sbjct: 1263 YNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQ 1322
Query: 215 EKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
G T+ +LL C E +D ++ + + ++ V++ G +AG
Sbjct: 1323 TCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIE--VFSILLDGMCRAGK 1380
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLR-VWKRYKQNLKVYNRGYI 332
++A + + + AY+ +I G + ++ +W+ ++ + +
Sbjct: 1381 LEEAWKQFDEISKNGLEPD-TIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFN 1439
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+I +LLK + + A ++ EE +RN D + + L+
Sbjct: 1440 VIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 99/237 (41%), Gaps = 10/237 (4%)
Query: 177 QMRDRGLVKK----TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
++ DR L + T +N ++ + G Y + + ++ + GI D YT +IL+ C
Sbjct: 932 KLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCC 991
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG-YVKAGLSDKALAVLRKSEVLMMHN 291
+ G V RG D T G +++ G+ D ++ ++ +
Sbjct: 992 CSLR-AVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGD 1050
Query: 292 KFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMES-AEKI 350
++ Y +I +++ ++ K N K Y +I +L K DGM + A +
Sbjct: 1051 --AKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCK-DGMTTEALDM 1107
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
F E + D+ + + L+D CR G L +A + + RG +V T+ + G
Sbjct: 1108 FSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHG 1164
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 16/260 (6%)
Query: 165 AKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYT 224
KS E AE ++++M + ++ + Y ++++ +++ G+ + + EM K I D T
Sbjct: 342 GKSFE-AEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYIT 400
Query: 225 FSILLSACAAASDGEGIDKIVAMMEA-DRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
++ L+ G+ I+ E RG+ D Y T Y KAG A + L
Sbjct: 401 YTTLIQGFGQG--GKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFS-LHN 457
Query: 284 SEVLMMHNKFSRAYDFVITQYAACGNKD------DVLRVWKRYKQNLKVYNRGYICVISS 337
V M Y +I G D D +R K + N+ +YN +++
Sbjct: 458 EMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRK-KGLQLNVCIYNS----MVNG 512
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
+ K +E A K+ +E E + D +IDAYCR G + KA L+ + RG +P
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572
Query: 398 VRTWYLMATGYLQNNQSEKG 417
V T+ ++ G+ E G
Sbjct: 573 VVTFNVLMNGFCMLGMLEDG 592
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 12/296 (4%)
Query: 133 QGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+GIE A F S I + + K E ++MQ M R + Y++
Sbjct: 240 EGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQ-MDFRSSTPDVVSYST 298
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEAD 251
+++ Y G KK LM +M+ KG+ ++YT+ SI+L C E +K++ M +
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEA-EKVLREMMSQ 357
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKD 311
+ ++ D VY T G+ K G A + M+ K S Y T G
Sbjct: 358 K-IIPDNVVYTTLIHGFFKLGHVRTANKWFDE----MLSKKISPDYITYTTLIQGFGQGG 412
Query: 312 DVLRVWKRYKQ----NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
V+ + + LK Y +I K M +A + E + +I
Sbjct: 413 KVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYG 472
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
LID C+ G L A L+ + + +G + NV + M G + E+ ++ MK+
Sbjct: 473 ALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKE 528
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 111/273 (40%), Gaps = 38/273 (13%)
Query: 131 KVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
K+ + A +F+ + K P Y L+ + + + + +M RGL +
Sbjct: 375 KLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEV 434
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMM 248
Y ++++VY + G SL +EM + G+ + T+ L+ + + ++++ M
Sbjct: 435 TYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEM 494
Query: 249 EADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG 308
+G+ L+ +Y + +G KAG ++A+ ++++ EV G
Sbjct: 495 RK-KGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEV--------------------AG 533
Query: 309 NKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
D + Y VI + + ++ A K+ +E R L + N
Sbjct: 534 IDPDAIT---------------YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
L++ +C G+L + L+ +G P+ T+
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITY 611
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 118/287 (41%), Gaps = 46/287 (16%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D+ K + A S N + + P++ Y AL++ + A ++ +MR +GL
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL 499
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
YNSM+N + GN ++ LM EME GID D T++ ++ A D + K
Sbjct: 500 QLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHK 559
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGL---SDKALAVLRKSEVLMMHNKFSRAYDFV 300
++ M DRG+ + +G+ G+ D+ L + + ++ + Y+ +
Sbjct: 560 LLQEM-LDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV----PDAITYNTL 614
Query: 301 ITQYAACGNKDDVLRVWKRYK---------------------QNLK--------VYNRGY 331
+ Q+ + + +++KR + +NLK + +GY
Sbjct: 615 MKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGY 674
Query: 332 ICVISS-------LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
+ ++S K + A ++FEE L D I N +D
Sbjct: 675 VPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVD 721
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 7/267 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y +++ K + A + ++M +G+ + Y+S+++ G + L+ +M
Sbjct: 53 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 112
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E+ I+ D +TFS L+ A +K+ M R + Y++ +G+
Sbjct: 113 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM-VKRSIDPSIVTYSSLINGFCMHDR 171
Query: 274 SDKALAVLRKSEVLMMHNKFSR--AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-G 330
D+A + E ++ + F Y+ +I + ++ + V++ Q V N
Sbjct: 172 LDEAKQMF---EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 228
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I L + + A++IF+E S + +I N L+D C+ G L KA + Q
Sbjct: 229 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 288
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKG 417
EP + T+ +M G + + E G
Sbjct: 289 RSKMEPTIYTYNIMIEGMCKAGKVEDG 315
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 167/405 (41%), Gaps = 29/405 (7%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR--LD 127
L+D+ V +G D+ +++ L KR L ++ + K L P + +D
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNG--LCKRGDTDLAFNL-LNKMEQGKLEPGVLIYNTIID 59
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
+ K + ++ A + F + K P+V Y +L++ A ++ M +R +
Sbjct: 60 GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 119
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
++++++ + + G + + L EM ++ ID T+S L++ + +D+
Sbjct: 120 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH---DRLDEAK 176
Query: 246 AMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVIT 302
M E + D Y T G+ K ++ + V R+ S+ ++ N + Y+ +I
Sbjct: 177 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT--YNILIQ 234
Query: 303 QYAACGNKDDVLRVWKR-----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
G+ D ++K N+ YN ++ L K +E A +FE +
Sbjct: 235 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT----LLDGLCKNGKLEKAMVVFEYLQRS 290
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ I N +I+ C+ G + L L+G +P+V + M +G+ + E+
Sbjct: 291 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 350
Query: 418 VEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIK 462
K+ + E GT P+ C + ++ D E + IK
Sbjct: 351 DALFKE---MKEDGTL--PNSGCYNTLIRARLRDGDREASAELIK 390
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 111/277 (40%), Gaps = 44/277 (15%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PS+ Y +L+N + ++A+ + + M + + YN+++ + + YK+++
Sbjct: 154 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK---YKRVEEG 210
Query: 210 MH---EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAAS 266
M EM ++G+ + T++IL+ A D + +I M +D GV + Y T
Sbjct: 211 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLD 269
Query: 267 GYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKV 326
G K G +KA+ V +R K +
Sbjct: 270 GLCKNGKLEKAMVVFE---------------------------------YLQRSKMEPTI 296
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
Y Y +I + K +E +F + + D+ N +I +CR+G +A+ L
Sbjct: 297 YT--YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 354
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+ + GT PN + + L++ E E +K+
Sbjct: 355 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 391
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 95/222 (42%), Gaps = 13/222 (5%)
Query: 208 SLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR---GVVLDWTVYATA 264
+L+ M KG D T+ ++++ D + ++ ME + GV+ +Y T
Sbjct: 2 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL----IYNTI 57
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK---RYK 321
G K D AL + ++ E + Y +I+ G D R+ K
Sbjct: 58 IDGLCKYKHMDDALNLFKEMETKGIRPNVV-TYSSLISCLCNYGRWSDASRLLSDMIERK 116
Query: 322 QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
N V+ + +I + +K + AEK+++E R++ I + LI+ +C L +
Sbjct: 117 INPDVFT--FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 174
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
A+ + + P+V T+ + G+ + + E+G+E ++
Sbjct: 175 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 216
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 16/260 (6%)
Query: 165 AKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYT 224
KS E AE ++++M + ++ + Y ++++ +++ G+ + + EM K I D T
Sbjct: 342 GKSFE-AEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYIT 400
Query: 225 FSILLSACAAASDGEGIDKIVAMMEA-DRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
++ L+ G+ I+ E RG+ D Y T Y KAG A + L
Sbjct: 401 YTTLIQGFGQG--GKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFS-LHN 457
Query: 284 SEVLMMHNKFSRAYDFVITQYAACGNKD------DVLRVWKRYKQNLKVYNRGYICVISS 337
V M Y +I G D D +R K + N+ +YN +++
Sbjct: 458 EMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRK-KGLQLNVCIYNS----MVNG 512
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
+ K +E A K+ +E E + D +IDAYCR G + KA L+ + RG +P
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572
Query: 398 VRTWYLMATGYLQNNQSEKG 417
V T+ ++ G+ E G
Sbjct: 573 VVTFNVLMNGFCMLGMLEDG 592
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 12/296 (4%)
Query: 133 QGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+GIE A F S I + + K E ++MQ M R + Y++
Sbjct: 240 EGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQ-MDFRSSTPDVVSYST 298
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEAD 251
+++ Y G KK LM +M+ KG+ ++YT+ SI+L C E +K++ M +
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEA-EKVLREMMSQ 357
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKD 311
+ ++ D VY T G+ K G A + M+ K S Y T G
Sbjct: 358 K-IIPDNVVYTTLIHGFFKLGHVRTANKWFDE----MLSKKISPDYITYTTLIQGFGQGG 412
Query: 312 DVLRVWKRYKQ----NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
V+ + + LK Y +I K M +A + E + +I
Sbjct: 413 KVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYG 472
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
LID C+ G L A L+ + + +G + NV + M G + E+ ++ MK+
Sbjct: 473 ALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKE 528
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 117/287 (40%), Gaps = 46/287 (16%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D+ K + A S N + + P++ Y AL++ + A ++ +MR +GL
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL 499
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
YNSM+N + GN ++ LM EME GID D T++ ++ A D + K
Sbjct: 500 QLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHK 559
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGL---SDKALAVLRKSEVLMMHNKFSRAYDFV 300
++ M DRG+ + +G+ G+ D+ L + + ++ + Y+ +
Sbjct: 560 LLQEM-LDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV----PDAITYNTL 614
Query: 301 ITQYAACGNKDDVLRVWKRYK---------------------QNLK--------VYNRGY 331
+ Q+ + + +++KR + +NLK + +GY
Sbjct: 615 MKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGY 674
Query: 332 ICVISS-------LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLID 371
+ ++S K A ++FEE L D I N +D
Sbjct: 675 VPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVD 721
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 111/273 (40%), Gaps = 38/273 (13%)
Query: 131 KVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
K+ + A +F+ + K P Y L+ + + + + +M RGL +
Sbjct: 375 KLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEV 434
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMM 248
Y ++++VY + G SL +EM + G+ + T+ L+ + + ++++ M
Sbjct: 435 TYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEM 494
Query: 249 EADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG 308
+G+ L+ +Y + +G KAG ++A+ ++++ EV G
Sbjct: 495 RK-KGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEV--------------------AG 533
Query: 309 NKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
D + Y VI + + ++ A K+ +E R L + N
Sbjct: 534 IDPDAIT---------------YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
L++ +C G+L + L+ +G P+ T+
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITY 611
>gi|255660968|gb|ACU25653.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 376
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 118/262 (45%), Gaps = 24/262 (9%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
+ AE + +++ + + + YN+M+N Y++ K L M +G + +F+I+
Sbjct: 7 DGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIM 65
Query: 229 LSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE- 285
+ D +D+++++ E + G V D Y G+ K G DK+L VL +E
Sbjct: 66 MRG---LFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQ 122
Query: 286 ---VLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-----KQNLKVYNRGYICVISS 337
VL + AY +I N D + V K N+ VYN +I+
Sbjct: 123 KGGVLG-----AFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNT----LING 173
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
L+ E A ++F E + + I N LI+ +C+ + +A L+ + +G +P
Sbjct: 174 LVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLDPG 233
Query: 398 VRTWYLMATGYLQNNQSEKGVE 419
V T+ ++ G +++ E+ ++
Sbjct: 234 VITYSMLMEGLCFDHKVERALQ 255
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 76/169 (44%), Gaps = 3/169 (1%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D ++ + + E G D I++ F +L + + M ++ VL +
Sbjct: 76 DEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHV-LEMAEQKGGVLGAFAYSA 134
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRG 182
++ + K +++A S N + + P+V++ L+N A E A + ++M
Sbjct: 135 MINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMH 194
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
I YN+++N + + + + +L+ E+ +KG+D T+S+L+
Sbjct: 195 CSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMEG 243
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 106/268 (39%), Gaps = 40/268 (14%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY L+ E+AE + + MR+ G+ YN++M+ Y + N K+ L +M
Sbjct: 219 VYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDM 278
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+G+ D TF IL+ C + V M++ V + VY + Y K G
Sbjct: 279 LGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFS--VTPNIAVYNSLIDAYCKVG 336
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYI 332
+A+A+ + E R++ + V+ Y
Sbjct: 337 DVSEAMALFLELE---------------------------------RFEVSPDVFT--YS 361
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I L E A IFE+ + + N LID C+ G + KA + +
Sbjct: 362 ILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTEN 421
Query: 393 GTEPNVRTWYLMATGY--LQNNQSEKGV 418
G EPNV T+ + GY ++N Q+ G+
Sbjct: 422 GVEPNVITFSTLIDGYCKIRNLQAAMGI 449
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 108/247 (43%), Gaps = 8/247 (3%)
Query: 191 NSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA 250
N ++ V +TG ++ L + EM G+ TF L+ C D ++ M
Sbjct: 151 NVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRV 210
Query: 251 DRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGN 309
+G+V VY G ++A ++ R EV + N ++ Y+ ++ Y N
Sbjct: 211 -KGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYT--YNTLMDGYCKLAN 267
Query: 310 KDDVLRVWK-RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
LR+++ + L + +I L KF M++A +F ++ +I + N
Sbjct: 268 AKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNS 327
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG---VEAMKKAL 425
LIDAYC+ G + +A L + + P+V T+ ++ G +++E+ E M K
Sbjct: 328 LIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEG 387
Query: 426 VLLEAGT 432
+L + T
Sbjct: 388 ILANSVT 394
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 159/376 (42%), Gaps = 19/376 (5%)
Query: 68 VPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR-- 125
V L+D+ V G D+ ++ L KR L +S+ KK ADV I
Sbjct: 189 VALIDRMVARGCQPDLFTYGTVVNG--LCKRGDIDLALSLL--KKMEKGKIEADVVIYTT 244
Query: 126 -LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRG 182
+D + + + A + F + K P+V Y +L+ A ++ M +R
Sbjct: 245 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 304
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI 241
+ + ++++++ + + G + + L EM ++ ID D +T+S L++ C E
Sbjct: 305 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 364
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFV 300
M+ D + Y T G+ KA ++ + + R+ S+ ++ N + Y+ +
Sbjct: 365 HMFELMISKD--CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT--YNTL 420
Query: 301 ITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
I G+ D +++K+ + Y ++ L K+ +E A +FE + +
Sbjct: 421 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 480
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG-- 417
DI N +I+ C+ G + L L+G +PNV + M +G+ + E+
Sbjct: 481 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 540
Query: 418 -VEAMKKALVLLEAGT 432
MK+ L +GT
Sbjct: 541 LFREMKEDGTLPNSGT 556
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 108/269 (40%), Gaps = 36/269 (13%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +L+N + ++A+ + + M + + YN+++ + + ++ L EM
Sbjct: 347 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 406
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
++G+ + T++ L+ A D + KI M +D GV D Y+ G K G
Sbjct: 407 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKL 465
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
+KAL V+ +Y ++ K +Y Y +
Sbjct: 466 EKAL---------------------VVFEY------------LQKSKMEPDIYT--YNIM 490
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I + K +E +F + + ++ I +I +CR+GL +A+ L + + GT
Sbjct: 491 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 550
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
PN T+ + L++ E +K+
Sbjct: 551 LPNSGTYNTLIRARLRDGDKAASAELIKE 579
>gi|255584218|ref|XP_002532847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527384|gb|EEF29525.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 131/287 (45%), Gaps = 46/287 (16%)
Query: 146 PEKLKLPSV----YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
P + P + Y ++++ Y + S E A + QM D+GLV + +N++++ ++
Sbjct: 73 PISIPCPKISSLLYESIISVYIQSGSIELAVLYFNQMVDKGLVFEPNIFNTLLDSLVKSK 132
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVY 261
++KL + +E++ K I+ D YT+ I++ C A +++ +E G+ + +Y
Sbjct: 133 CFEKLWFVFNEVKGK-IELDVYTYGIMIKGCCEAGVFYKGFELLTDLE-KMGLSPNVVIY 190
Query: 262 ATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
T G K G +A + K EV ++ N+++ Y +I +
Sbjct: 191 TTLIDGCCKNGDVRRAKLLFNKMGEVNLVANQYT--YTVLINGF---------------- 232
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
+ +G L+ DG E +FE+ + + ++ N +I+ +C G LH
Sbjct: 233 ------FKKG--------LRKDGFE----LFEKMQLDGVFPNLYTYNCMINEFCNEGKLH 274
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNN---QSEKGVEAMKKA 424
KA L + RG NV T+ + +G + ++EK V+ MK+A
Sbjct: 275 KAYELFDEMCKRGVVSNVVTYNTLISGLCRKTRIWEAEKLVDQMKRA 321
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 109/287 (37%), Gaps = 65/287 (22%)
Query: 147 EKLKLPSV------YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNV---- 196
EK++L V Y ++N + KA + +M RG+V + YN++++
Sbjct: 246 EKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYELFDEMCKRGVVSNVVTYNTLISGLCRK 305
Query: 197 -----------------YYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
Y GN+ + L+ EMEE+GI K T++IL +A D E
Sbjct: 306 TRIWEAEKLVDQMKRAGYSNGGNWVDVTDLVREMEERGISPSKVTYTILTNAHVRLGDME 365
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYD 298
+ ME G+V D +Y G G +A + R +E+ + N+ Y+
Sbjct: 366 KAFHFYSSME-KVGLVPDVHIYGVLLHGLCVKGNMKEASKLFRSMAEMKLEPNEV--VYN 422
Query: 299 FVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRN 358
+I Y GN LR K E E +
Sbjct: 423 TMINGYCKAGNSFRALRFLK----------------------------------EMEDKR 448
Query: 359 LCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMA 405
L ++ + I C+ G +AE L+ K + G EP+V + +++
Sbjct: 449 LVPNVASYSSTIGILCKDGKWQEAEILLNKMRGSGLEPSVSIYNIIS 495
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 128/322 (39%), Gaps = 30/322 (9%)
Query: 115 FVLTPADVAIRLDLIA---KVQGIEQAASYFNCVP-----EKLKL-PSVYIALLNAYACA 165
FV I LD+ ++G +A ++ EK+ L P+V I C
Sbjct: 139 FVFNEVKGKIELDVYTYGIMIKGCCEAGVFYKGFELLTDLEKMGLSPNVVIYTTLIDGCC 198
Query: 166 KSAE--KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKY 223
K+ + +A+++ +M + LV Y ++N +++ G K L +M+ G+ + Y
Sbjct: 199 KNGDVRRAKLLFNKMGEVNLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDGVFPNLY 258
Query: 224 TFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLR 282
T++ +++ C + + M RGVV + Y T SG + R
Sbjct: 259 TYNCMINEFCNEGKLHKAYELFDEM--CKRGVVSNVVTYNTLISGLCRK---------TR 307
Query: 283 KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKF 341
E + ++ RA Y+ GN DV + + ++ + Y + ++ ++
Sbjct: 308 IWEAEKLVDQMKRA------GYSNGGNWVDVTDLVREMEERGISPSKVTYTILTNAHVRL 361
Query: 342 DGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
ME A + E L D+ I L+ C +G + +A L EPN +
Sbjct: 362 GDMEKAFHFYSSMEKVGLVPDVHIYGVLLHGLCVKGNMKEASKLFRSMAEMKLEPNEVVY 421
Query: 402 YLMATGYLQNNQSEKGVEAMKK 423
M GY + S + + +K+
Sbjct: 422 NTMINGYCKAGNSFRALRFLKE 443
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 134/316 (42%), Gaps = 23/316 (7%)
Query: 144 CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
C+P + Y L+N + A A ++ M +RG Y+ +++ ++ G
Sbjct: 323 CIPNDV----TYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA 378
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
++ SL +M EKG + +S+L+ C E + + M+ + G + + Y+
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS--GCLPNAYTYS 436
Query: 263 TAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW-KRY 320
+ G+ K GL ++A+ V ++ + NKF Y +I G + + VW K
Sbjct: 437 SLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKF--CYSVLIDGLCGVGRVKEAMMVWSKML 494
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH-------DIRIPNHLIDAY 373
+K Y +I L M++A K++ E LC D+ N L+D
Sbjct: 495 TIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM----LCQEEPKSQPDVVTYNILLDGL 550
Query: 374 CRRGLLHKAETLIYKAQLRGTEPNVRTW-YLMATGYLQNNQSEKGVEAMKKALVLLEAGT 432
C + + +A L+ RG +P+V T + T ++N +KG +++ +V L
Sbjct: 551 CMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQ 610
Query: 433 RWKPSKECLAACLGYY 448
R + + LG Y
Sbjct: 611 RVSGACTIVEVMLGKY 626
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/316 (18%), Positives = 132/316 (41%), Gaps = 44/316 (13%)
Query: 114 NFVLTPADVAIRLDL--IAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAE 169
N ++P ++ L + + K++ +++A F +PE+ LP Y L++ + +
Sbjct: 180 NMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERID 239
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
+A +++ +M+ G + YN +++ + G+ ++ L+ M KG ++ T++ L+
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI 299
Query: 230 SACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVL 287
+DK V+++E + + Y T +G VK + A+ +L E
Sbjct: 300 HGLCLKGK---LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSME-- 354
Query: 288 MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESA 347
+ Y N +Y+ +IS L K E A
Sbjct: 355 -----------------------------ERGYHLNQHIYS----VLISGLFKEGKAEEA 381
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
++ + + +I + + L+D CR G ++A+ ++ + G PN T+ + G
Sbjct: 382 MSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKG 441
Query: 408 YLQNNQSEKGVEAMKK 423
+ + E+ V+ K+
Sbjct: 442 FFKTGLCEEAVQVWKE 457
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 5/146 (3%)
Query: 136 EQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
E+A S + + EK P+ VY L++ +A+ I+ +M G + Y+S+
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADR 252
M +++TG ++ + EM++ G +K+ +S+L+ C E + M+
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTI-- 496
Query: 253 GVVLDWTVYATAASGYVKAGLSDKAL 278
G+ D Y++ G G D AL
Sbjct: 497 GIKPDTVAYSSIIKGLCGIGSMDAAL 522
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 135/305 (44%), Gaps = 15/305 (4%)
Query: 127 DLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKK 186
D + K + ++ A F+ V E+ + + L++ YAC E + ++Q+M+ G
Sbjct: 157 DNLLKCEDLKAAQLAFDGVTERDT--ATWNVLISGYACCNQLENIQNLIQKMKGDGFEPN 214
Query: 187 TIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA-AASDGEGIDKIV 245
+N +++ + + G+ + L EM+ + D YT I+L ACA A+ G K V
Sbjct: 215 VYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARG--KQV 272
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
+G LD + A Y K G A+ V + + N + + ++T YA
Sbjct: 273 HAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNR-----ISNPNLVSQNAMLTAYA 327
Query: 306 ACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
G+ D+ + +++ N + + ++ V+SS + +E+ + F+ N+ ++
Sbjct: 328 MHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSLK 387
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
++D R G L +A L+ K + P+ W + G + E G E ++
Sbjct: 388 HYTCIVDLLSRAGRLDEAYELVKKIPRK---PDSVMWGALLGGCVIWGNVELG-EIAAES 443
Query: 425 LVLLE 429
L+ LE
Sbjct: 444 LIELE 448
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 102/235 (43%), Gaps = 21/235 (8%)
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
+ +++++ + Q G K+ L+ M+ G + + T + +L ACA + + +
Sbjct: 12 VSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQN-------LNL 64
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS----RAYDFVITQ 303
+ G V T + ++ +V GL D L + + FS +Y+ +I
Sbjct: 65 GKEIHGYV---TRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVG 121
Query: 304 YAACGNKDDVLRVWKRYK---QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC 360
Y GN + ++ + + ++ +N +LLK + +++A+ F+ R
Sbjct: 122 YCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLKCEDLKAAQLAFDGVTER--- 178
Query: 361 HDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
D N LI Y L + LI K + G EPNV TW + +G+++N +E
Sbjct: 179 -DTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNE 232
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 130/309 (42%), Gaps = 15/309 (4%)
Query: 111 KKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLK---LPSV--YIALLNAYACA 165
KK N V++P + + ++ A +N V E + P+V Y L+ +
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGA---YNIVKEMIASGCRPNVVIYTTLIKTFLQN 465
Query: 166 KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTF 225
A ++++M+++G+ YNS++ + + S + EM E G+ + +T+
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Query: 226 SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
+S AS+ DK V M + GV+ + + + Y K +K +
Sbjct: 526 GAFISGYIEASEFASADKYVKEMR-ECGVLPNKVLCTGLINEYCK---KEKVIEACSAYR 581
Query: 286 VLMMHNKFSRAYDFVITQYAACGNK--DDVLRVWKRYK-QNLKVYNRGYICVISSLLKFD 342
++ A + + N DD +++ + + + Y +I+ K
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
M+ A IF+E L ++ I N L+ +CR G + KA+ L+ + ++G PN T+
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 403 LMATGYLQN 411
+ GY ++
Sbjct: 702 TIIDGYCKS 710
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 21/283 (7%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N ++ + +KA I +M + GL I YN ++ + ++G +K L+ EM
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
KG+ + T+ ++ + D ++ M+ +G+V D VY T G +
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL-KGLVPDSFVYTTLVDGCCRLNDV 748
Query: 275 DKALAVL--RKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLR-----VWKRY-KQNLKV 326
++A+ + K F+ ++V ++ K +VL + R+ K N
Sbjct: 749 ERAITIFGTNKKGCASSTAPFNALINWVF-KFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
YN +I L K +E+A+++F + ++ NL + L++ Y + G + +
Sbjct: 808 YN----IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLE 429
+A G EP+ + ++ +L+ + KALVL++
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMT-------TKALVLVD 899
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 135/329 (41%), Gaps = 39/329 (11%)
Query: 149 LKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
+ L Y L++ K E A+ ++ +M G+ Y+ +++ + N
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGI-DKIVAMMEA--DRGVVLDWTVYATAA 265
L+HEM GI+ Y + C EG+ +K A+ + G++ YA+
Sbjct: 334 LVHEMVSHGINIKPYMY----DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 266 SGY-----VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
GY V+ G + L ++K +++ Y V+ + G+ D + K
Sbjct: 390 EGYCREKNVRQGY--ELLVEMKKRNIVIS----PYTYGTVVKGMCSSGDLDGAYNIVKEM 443
Query: 321 -----KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
+ N+ +Y +I + L+ A ++ +E + + + DI N LI +
Sbjct: 444 IASGCRPNVVIYTT----LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ---SEKGVEAMKKALVLLEAGT 432
+ +A + + + G +PN T+ +GY++ ++ ++K V+ M++ VL
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL----- 554
Query: 433 RWKPSKE-CLAACLGYYKKERDIEGADYF 460
P+K C Y KKE+ IE +
Sbjct: 555 ---PNKVLCTGLINEYCKKEKVIEACSAY 580
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 112/257 (43%), Gaps = 5/257 (1%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
EKA+ + M GL+ + Y S++ Y + N ++ L+ EM+++ I YT+ +
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVL 287
+ ++ D +G IV M A G + +Y T +++ A+ VL++ E
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIAS-GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 288 MMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMES 346
+ + F Y+ +I + D+ +N LK Y IS ++ S
Sbjct: 483 IAPDIF--CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540
Query: 347 AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMAT 406
A+K +E + + + LI+ YC++ + +A + +G + +T+ ++
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 407 GYLQNNQSEKGVEAMKK 423
G +N++ + E ++
Sbjct: 601 GLFKNDKVDDAEEIFRE 617
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 116/277 (41%), Gaps = 17/277 (6%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PSV Y LL A + +A ++ +MR +G + YN ++N + G
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 237
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
++ + G D +++ +L AA E ++++ A M ++ + + + +
Sbjct: 238 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM-MEKNCMPNEVTFDMLVRFFC 296
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAY--DFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
+ G+ ++A+ VL E + H + + VI G DD ++ N+ Y
Sbjct: 297 RGGMVERAIQVL---EQMSGHGCAANTTLCNIVINTICKQGRVDDAF----QFLNNMGSY 349
Query: 328 NR-----GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
Y V+ L + + E A+++ +E +N + N I C++GL+ +A
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409
Query: 383 ETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
LI + G E N+ T+ + G+ + + +E
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 446
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/280 (18%), Positives = 119/280 (42%), Gaps = 10/280 (3%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
NC+P ++ + L+ + E+A +++QM G T N ++N + G
Sbjct: 280 NCMPNEV----TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR 335
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
++ M G D +++ +L A E +++ M + + +
Sbjct: 336 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEM-VRKNCPPNEVTFN 394
Query: 263 TAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK 321
T + GL ++A ++ + SE N + Y+ ++ + G D L ++ Y
Sbjct: 395 TFICILCQKGLIEQATMLIEQMSEHGCEVNIVT--YNALVNGFCVQGRVDSALELF--YS 450
Query: 322 QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
K Y +++ L + +++A ++ E ++ ++ N L+ +C++GL+ +
Sbjct: 451 MPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDE 510
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
A L+ + G PN+ T+ + G ++ SE+ +E +
Sbjct: 511 AIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELL 550
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 109/270 (40%), Gaps = 18/270 (6%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKS-AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
NC P ++ + +I +L C K E+A ++++QM + G + YN+++N + G
Sbjct: 385 NCPPNEVTF-NTFICIL----CQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG 439
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTV 260
L + M K + T++ LL+ C A + + M++ D +
Sbjct: 440 RVDSALELFYSMPCKP---NTITYTTLLTGLCNAERLDAAAELLAEMLQKD--CAPNVVT 494
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR--AYDFVITQYAACGNKDDVLRVWK 318
+ S + + GL D+A+ ++ E +M H Y+ ++ N ++ L +
Sbjct: 495 FNVLVSFFCQKGLMDEAIELV---EQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLH 551
Query: 319 RYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
N + Y +I L + D +E A K+F + + I N ++ A C+R
Sbjct: 552 GLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRC 611
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
A G PN T+ + G
Sbjct: 612 NTDGAIDFFAYMVSNGCMPNELTYITLIEG 641
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFV-----LTPADVAI 124
L++Q E G +++ ++ F + R AL++ M K N + LT A
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAE 471
Query: 125 RLDLIAKV--QGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKS-AEKAEIIMQQMRDR 181
RLD A++ + +++ +C P V +L ++ C K ++A +++QM +
Sbjct: 472 RLDAAAELLAEMLQK-----DCAPN-----VVTFNVLVSFFCQKGLMDEAIELVEQMMEH 521
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
G I YN++++ + N ++ L+H + G+ D T+S ++
Sbjct: 522 GCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSII 569
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 153/349 (43%), Gaps = 22/349 (6%)
Query: 89 IIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVA---IRLDLIAKVQGIEQAASYFNCV 145
+I F K+ A+++ M ++ P ++ + +D + K+ + A +
Sbjct: 63 LIAAFARAKKLEEAMKLLEEMRERG----CPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 118
Query: 146 PEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
E P+V + +L++ + + + A ++ M +G+ + Y+++++ ++ +
Sbjct: 119 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF 178
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYAT 263
+ ++ EM+ G+ D +T+S L+ A E ++++ M A G D VY++
Sbjct: 179 LEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM-AGSGCTPDVVVYSS 237
Query: 264 AASGYVKAGL---SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY 320
+ K+G + K L +RK + Y+ VI G + + +
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQR----KSPDVVTYNTVIDGLCKLGKIAEAQVILDQM 293
Query: 321 KQNLKVYNR--GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
+++ V Y VI+ L K D + A+K+ + D+ +ID C+ G
Sbjct: 294 QESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGR 353
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN---NQSEKGVEAMKKA 424
L +AE L+ + G PNV T+ + +G + +++E+ +E M+ A
Sbjct: 354 LEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNA 402
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 132 VQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYN 191
+QG+++A N V Y L++ A+ ++AE +M++MR+ G + YN
Sbjct: 361 LQGMKRAGCAPNVV--------TYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYN 412
Query: 192 SMMNVYYQTGNYKKLDSLMHEMEEKGIDC--DKYTFSILLSA 231
+M+N +G K+ L+ M++ +C D T+ +++A
Sbjct: 413 TMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNA 454
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 159/376 (42%), Gaps = 19/376 (5%)
Query: 68 VPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIR-- 125
V L+D+ V G D+ ++ L KR L +S+ KK ADV I
Sbjct: 205 VALIDRMVARGCQPDLFTYGTVVNG--LCKRGDIDLALSLL--KKMEKGKIEADVVIYTT 260
Query: 126 -LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRG 182
+D + + + A + F + K P+V Y +L+ A ++ M +R
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 183 LVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGI 241
+ + ++++++ + + G + + L EM ++ ID D +T+S L++ C E
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 242 DKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFV 300
M+ D + Y T G+ KA ++ + + R+ S+ ++ N + Y+ +
Sbjct: 381 HMFELMISKD--CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT--YNTL 436
Query: 301 ITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
I G+ D +++K+ + Y ++ L K+ +E A +FE + +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG-- 417
DI N +I+ C+ G + L L+G +PNV + M +G+ + E+
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Query: 418 -VEAMKKALVLLEAGT 432
MK+ L +GT
Sbjct: 557 LFREMKEDGTLPNSGT 572
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 108/269 (40%), Gaps = 36/269 (13%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +L+N + ++A+ + + M + + YN+++ + + ++ L EM
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
++G+ + T++ L+ A D + KI M +D GV D Y+ G K G
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKL 481
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICV 334
+KAL V+ +Y ++ K +Y Y +
Sbjct: 482 EKAL---------------------VVFEY------------LQKSKMEPDIYT--YNIM 506
Query: 335 ISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGT 394
I + K +E +F + + ++ I +I +CR+GL +A+ L + + GT
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 395 EPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
PN T+ + L++ E +K+
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKE 595
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 169/408 (41%), Gaps = 48/408 (11%)
Query: 48 SSMYKLYRMLSPMGDPNDSMVPLLDQW-VEEGRPLDMEQLRIIIKKFRLYKRFSHALQIS 106
S++ + R L G +D++ LLD+ + G LD+ ++ R+ AL++
Sbjct: 139 SALEMVVRALGREGQ-HDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELF 197
Query: 107 MWMTKKSNFVLTPADVAIRLDLIAKV-QGIEQAASYFNCVPEKLKLPSVYIALLNAYACA 165
+ ++ T + LD+ ++ + + + + + P + A AC
Sbjct: 198 AEL-RRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACC 256
Query: 166 KSA--EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKY 223
+ ++A + ++ RG + YN+++ V+ + GNY + ++ EME+ G D
Sbjct: 257 RDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAV 316
Query: 224 TFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK 283
T++ L A A E + + M A +G++ + Y T + Y G D+ALA+ +
Sbjct: 317 TYNELAGTYARAGFFEEAARCLDTM-ASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQ 375
Query: 284 SE-------------VLMMHNKFSRAYDFVI---------------------TQYAACGN 309
+ VL M K SR F + T A CG
Sbjct: 376 MKKTGFVPNVNTYNLVLGMLGKKSR---FTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGK 432
Query: 310 K---DDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRI 365
+ D V RV + + +++ Y +I++ + +A K++ E S I
Sbjct: 433 RGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITT 492
Query: 366 PNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
N L++ R+G A++++ K + +G +PN +++ L+ Y +
Sbjct: 493 YNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGN 540
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 143/356 (40%), Gaps = 22/356 (6%)
Query: 65 DSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAI 124
D + L DQ + G ++ +++ RF+ L++ M++ TP V
Sbjct: 367 DEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSG---CTPNRVT- 422
Query: 125 RLDLIAKVQGIEQAASYFNCVPEKLKLPSV------YIALLNAYACAKSAEKAEIIMQQM 178
+ + V G Y V E ++ V Y L+ AY S A + +M
Sbjct: 423 -WNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEM 481
Query: 179 RDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDG 238
G YN+++NV + G++ S++ +M KG ++ ++S+LL A +
Sbjct: 482 TSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNV 541
Query: 239 EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYD 298
GI I + V W + T K D ++ + +N ++
Sbjct: 542 AGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKA-RGYNPDLVIFN 600
Query: 299 FVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNRGYICVISSLLKFDGMESAEKIFEE 353
+++ YA G V+ K+ +L YN ++ K AEKI +
Sbjct: 601 SMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNS----LMDMYAKCSESWEAEKILNQ 656
Query: 354 WE-SRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+ S+ + D+ N +I+ +C++GL+ +A+ ++ + G P T++ + GY
Sbjct: 657 LKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGY 712
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 126/286 (44%), Gaps = 15/286 (5%)
Query: 145 VPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
+P++L + L++A KA ++ M L + YNS+M+ +
Sbjct: 261 MPDQL----TFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMG 316
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYA 262
K ++ M KG +++ L++ + +DK + + E + +G++ D Y
Sbjct: 317 KTVNVFDTMVRKGCVPSVISYTTLINGYCKI---QIMDKAMGLFEEMSQQGLIPDTVTYN 373
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK--DDVLRVWKRY 320
T G G A+A+ + ++++ + + I C N + + + K
Sbjct: 374 TLIHGLCHVGRLRDAIALFHE---MVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVI 430
Query: 321 K-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
+ NL Y V+ + + +E+A +F + S+ L D+R +I+ C++GLL
Sbjct: 431 EGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLL 490
Query: 380 HKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
+A L + G PN T+ L+ G+L+NN++ + ++ ++ L
Sbjct: 491 AEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEML 536
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 11/248 (4%)
Query: 137 QAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
+ + F+ + K +PSV Y L+N Y + +KA + ++M +GL+ T+ YN+++
Sbjct: 317 KTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLI 376
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS-ACAAASDGEGIDKIVAMMEADRG 253
+ G + +L HEM G D T+ IL C E + +++ G
Sbjct: 377 HGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAM----VLLKVIEG 432
Query: 254 VVL--DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKD 311
L D +Y+ G +AG + A + K +H R Y +I G
Sbjct: 433 TNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDV-RTYTIMINGLCQQGLLA 491
Query: 312 DVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+ +++ +N N Y + L+ + A ++F+E SR D+ L+
Sbjct: 492 EASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLV 551
Query: 371 DAYCRRGL 378
+ GL
Sbjct: 552 EMLSDDGL 559
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 110/298 (36%), Gaps = 15/298 (5%)
Query: 131 KVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI 188
V I+ A S FN + PS+ + LL + K + +QM G+ T
Sbjct: 31 NVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTY 90
Query: 189 DYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAM 247
N ++N + S++ ++ + G TF+ L+ C GE + M
Sbjct: 91 TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM 150
Query: 248 MEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYDFVITQ 303
G D Y T +G K G + A+ LR M + R Y +I
Sbjct: 151 --TGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRS-----MEQRNCRPTVVVYSTIIDS 203
Query: 304 YAACGNKDDVLRVWK-RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
+ L ++ + + N Y +I L + A ++F R + D
Sbjct: 204 LCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPD 263
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEA 420
N L+DA C+ G++ KA ++ +P+V T+ + G+ ++ K V
Sbjct: 264 QLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNV 321
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/368 (19%), Positives = 147/368 (39%), Gaps = 50/368 (13%)
Query: 63 PNDSMVPLL-DQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTK---KSNFVLT 118
P D V LL D G D+ +++ + +R+ H + M N V
Sbjct: 196 PVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTF 255
Query: 119 PADVA--IRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQ 176
+ R L +V + + C P+ +Y +++ + E A I+
Sbjct: 256 STLIGHLCRNGLFERVHEVHAQMAEHGCAPDV----RMYATIIDGVCKEERLEVARGILN 311
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
+M GL + YN+++ +++ + L+ EM +K D TF+IL+
Sbjct: 312 RMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVD--FLCQ 369
Query: 237 DGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFS 294
+G +D+++ ++E + G + D Y T +G+ K GL D+A+ +LR
Sbjct: 370 NGL-VDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRS----------- 417
Query: 295 RAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEW 354
AACG + + + Y V+ L + AE++ +
Sbjct: 418 ---------MAACGCRPNTVS---------------YTIVLKGLCSAERWVDAEELMSQM 453
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
+ + N LI+ C++GL+ +A L+ + + G P++ ++ + G + +
Sbjct: 454 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNT 513
Query: 415 EKGVEAMK 422
++ +E +
Sbjct: 514 DEALELLN 521
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 107/243 (44%), Gaps = 19/243 (7%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+++QM + G + I Y +++N + + G + L+ M G + +++I+L
Sbjct: 379 VLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLC 438
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF 293
+A +++++ M +G + + T + K GL ++A+ +L++ M+ N
Sbjct: 439 SAERWVDAEELMSQM-IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ----MLVNGC 493
Query: 294 SR---AYDFVITQYAACGNKDDVLR-----VWKRYKQNLKVYNRGYICVISSLLKFDG-M 344
S +Y VI GN D+ L V K N +Y+ I+S L +G +
Sbjct: 494 SPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSS-----IASALSGEGRI 548
Query: 345 ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
++FE + + D + N +I + C+RG +A + G PN T+ ++
Sbjct: 549 NKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTIL 608
Query: 405 ATG 407
G
Sbjct: 609 IRG 611
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 152 PSVYIALLNAYACAKS-AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLM 210
P + L+N + C K E+A +++QM G I Y+++++ + GN + L+
Sbjct: 462 PVTFNTLIN-FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELL 520
Query: 211 HEMEEKGIDCDKYTFSILLSACAAASDGEG-IDKIVAMME--ADRGVVLDWTVYATAASG 267
+ M +KG+ + +I+ S+ A+A GEG I+K++ M E D V D +Y S
Sbjct: 521 NVMVKKGMSPN----TIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISS 576
Query: 268 YVKAGLSDKALAVL 281
K G +D+A+ L
Sbjct: 577 LCKRGETDRAIEFL 590
>gi|356513957|ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Glycine max]
Length = 626
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 118/275 (42%), Gaps = 15/275 (5%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N+Y + E A + + M RG++ I + +MN + G K+ L H+M
Sbjct: 286 YNTLVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNGLCEEGKVKEAHQLFHQMV 345
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+GID D +++ L+S + ++ M + G+ D G+ + G
Sbjct: 346 HRGIDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGN-GICPDSVTCRLIVEGFARDG-- 402
Query: 275 DKALAVLRK-SEVLMMHNKFSR-AYDFVITQYAACGN----KDDVLRVWKR-YKQNLKVY 327
K L+ L E+ K YD++I G + +LR+ + Y + Y
Sbjct: 403 -KLLSALNTVVELKRFRIKIPEDLYDYLIVALCIEGRPFAARSFLLRISQDGYMPKINTY 461
Query: 328 NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIY 387
N+ ++ SL KF+ +E A + E R++ ++ +I CR +AE L+
Sbjct: 462 NK----LVESLCKFNNVEEALILKSEMVKRSMILNLVAYRAVISCLCRVNRTLEAEGLLE 517
Query: 388 KAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ G P+V + GY + N+ +K V +K
Sbjct: 518 EMVSSGILPDVEISRALINGYCEENKVDKAVSLLK 552
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 142/322 (44%), Gaps = 23/322 (7%)
Query: 122 VAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDR 181
AIR+ A+ + +A++ P S Y AL++A++ A A + Q+M D
Sbjct: 158 TAIRV--FARAGCLAEASAILEAAPAPDA--SAYTALVSAFSRAGRFRDAVAVFQRMVDG 213
Query: 182 GLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG 240
G+ + YN + + Y + +K++ +L+ M+E GI+ D+YT++ L+S C
Sbjct: 214 GVQPALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHRE 273
Query: 241 IDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFV 300
++ M+A G D + + Y KA ++A+ VL++ E Y+ +
Sbjct: 274 AAQVFDEMKAA-GFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVV-TYNSL 331
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNRG-------YICVISSLLKFDGMESAEKIFEE 353
I+ Y KD +L KQ ++ RG Y +IS L + +++A + E
Sbjct: 332 ISAYV----KDGLLEEALELKQEMEF--RGMKPDVVTYTTLISGLDRVGKIDAALATYSE 385
Query: 354 WESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN-- 411
++ N LI + RG + + + G P+V TW + + + QN
Sbjct: 386 MVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGL 445
Query: 412 NQSEKGV-EAMKKALVLLEAGT 432
+ GV + MKKA + E T
Sbjct: 446 DSEVSGVFKEMKKAGYIPERDT 467
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 114/262 (43%), Gaps = 12/262 (4%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
++ M++ G+ + YN++++ + G +++ + EM+ G + DK TF+ LL
Sbjct: 242 LVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYG 301
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF 293
A E ++ ME + G Y + S YVK GL ++AL + ++ E M
Sbjct: 302 KARKHEEAIGVLKRME-NAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 360
Query: 294 SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESA----EK 349
Y +I+ G D L + +N N +C ++L+K G+
Sbjct: 361 V-TYTTLISGLDRVGKIDAALATYSEMVRNGCSPN---LCTYNALIKLHGVRGKFTEMMA 416
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
+F++ S D+ N L+ + + GL + + + + G P T+ + + Y
Sbjct: 417 VFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYS 476
Query: 410 QNNQSEKGVEAMKKALVLLEAG 431
+ ++ +E K+ ++EAG
Sbjct: 477 RCGLFDQAMEIYKR---MIEAG 495
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 153/355 (43%), Gaps = 17/355 (4%)
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
L ++V G+ + +PE+ Y++L+++Y+ ++A I ++M + G+
Sbjct: 445 LDSEVSGVFKEMKKAGYIPER----DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDI 500
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
YN++++ + G +++ + L EM ++ D+ ++S LL A A A + + +
Sbjct: 501 STYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSED 560
Query: 248 MEADRGVVLDWTVYATAASGYVKAGL--SDKALAVLRKSEVLMMHNKFSRAYDFVITQYA 305
+ A+R +W V L ++KA LR+ + N + +++ Y
Sbjct: 561 IYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDIN----VLNAMVSIYG 616
Query: 306 ACGNKDDVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIR 364
V V +N ++ Y ++ + E E I E +S + D
Sbjct: 617 KNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRY 676
Query: 365 IPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKA 424
N +I AY R+G + +A L + + G +P++ T+ + Y+ N E+ ++ ++
Sbjct: 677 SYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVR-- 734
Query: 425 LVLLEAGTRWKPSKECLAACL-GYYKKERDIEGADYFIKLLTGKEIISADLQDRL 478
L+ G R P++ + L GY + R +E + L IS + RL
Sbjct: 735 -YLVTQGCR--PNERTFNSILQGYSRHGRMVEAKSFLSNLPKIYPGISKQEKQRL 786
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 116/277 (41%), Gaps = 17/277 (6%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
PSV Y LL A + +A ++ +MR +G + YN ++N + G
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 237
Query: 210 MHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYV 269
++ + G D +++ +L AA E ++++ A M ++ + + + +
Sbjct: 238 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM-MEKNCMPNEVTFDMLVRFFC 296
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAY--DFVITQYAACGNKDDVLRVWKRYKQNLKVY 327
+ G+ ++A+ VL E + H + + VI G DD ++ N+ Y
Sbjct: 297 RGGMVERAIQVL---EQMSGHGCAANTTLCNIVINTICKQGRVDDAF----QFLNNMGSY 349
Query: 328 NR-----GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
Y V+ L + + E A+++ +E +N + N I C++GL+ +A
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409
Query: 383 ETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
LI + G E N+ T+ + G+ + + +E
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 446
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/280 (18%), Positives = 118/280 (42%), Gaps = 10/280 (3%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
NC+P ++ + L+ + E+A +++QM G T N ++N + G
Sbjct: 280 NCMPNEV----TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR 335
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
++ M G D +++ +L A E +++ M + + +
Sbjct: 336 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEM-VRKNCPPNEVTFN 394
Query: 263 TAASGYVKAGLSDKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK 321
T + GL ++A ++ + SE N + Y+ ++ + G D L ++ Y
Sbjct: 395 TFICILCQKGLIEQATMLIEQMSEHGCEVNIVT--YNALVNGFCVQGRVDSALELF--YS 450
Query: 322 QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHK 381
K Y +++ L + +++A ++ E ++ ++ N L+ +C++GL+ +
Sbjct: 451 MPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDE 510
Query: 382 AETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAM 421
A L+ + G PN+ T+ + G + SE+ +E +
Sbjct: 511 AIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELL 550
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 109/270 (40%), Gaps = 18/270 (6%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKS-AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTG 201
NC P ++ + +I +L C K E+A ++++QM + G + YN+++N + G
Sbjct: 385 NCPPNEVTF-NTFICIL----CQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG 439
Query: 202 NYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTV 260
L + M K + T++ LL+ C A + + M++ D +
Sbjct: 440 RVDSALELFYSMPCKP---NTITYTTLLTGLCNAERLDAAAELLAEMLQKD--CAPNVVT 494
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR--AYDFVITQYAACGNKDDVLRVWK 318
+ S + + GL D+A+ ++ E +M H Y+ ++ N ++ L +
Sbjct: 495 FNVLVSFFCQKGLMDEAIELV---EQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLH 551
Query: 319 RYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
N + Y +I L + D +E A K+F + + I N ++ A C+R
Sbjct: 552 GLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRC 611
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
A G PN T+ + G
Sbjct: 612 NTDGAIDFFAYMVSNGCMPNELTYITLIEG 641
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFV-----LTPADVAI 124
L++Q E G +++ ++ F + R AL++ M K N + LT A
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAE 471
Query: 125 RLDLIAKV--QGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKS-AEKAEIIMQQMRDR 181
RLD A++ + +++ +C P V +L ++ C K ++A +++QM +
Sbjct: 472 RLDAAAELLAEMLQK-----DCAPN-----VVTFNVLVSFFCQKGLMDEAIELVEQMMEH 521
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
G I YN++++ N ++ L+H + G+ D T+S ++
Sbjct: 522 GCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSII 569
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 150/324 (46%), Gaps = 19/324 (5%)
Query: 119 PADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQM 178
P +A + ++A+ + +A++ + P Y AL++A++ A A + ++M
Sbjct: 141 PRVLATAIRVMARAGRLAEASALLDAAPGPDA--GAYTALVSAFSRAGRFRDAVAVFRRM 198
Query: 179 RDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
D G+ + YN +++VY + +K++ L+ M+E G+ D+YT++ L+S C +
Sbjct: 199 VDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRAL 258
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY 297
+ ++ M+A G D + + Y KA D+A+ V+++ E + Y
Sbjct: 259 YKEAAQVFDEMKAS-GFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVV-TY 316
Query: 298 DFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-----GYICVISSLLKFDGMESAEKIFE 352
+ +I+ Y KD +L KQ ++V Y +IS L + +++A ++
Sbjct: 317 NSLISSYV----KDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYD 372
Query: 353 EWESRNLCH-DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
E RN C ++ N LI + RG + + + + G P++ TW + + QN
Sbjct: 373 EM-VRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQN 431
Query: 412 --NQSEKGV-EAMKKALVLLEAGT 432
+ GV + MKKA + E T
Sbjct: 432 GLDSEVSGVFKEMKKAGYIPERDT 455
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 137/300 (45%), Gaps = 15/300 (5%)
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
L ++V G+ + +PE+ Y++L+++Y+ + A I ++M + G+
Sbjct: 433 LDSEVSGVFKEMKKAGYIPER----DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDV 488
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
YN++++ + G +++ + L EMEE+ D+Y++S LL A A A + +DK+ A+
Sbjct: 489 STYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANA---KRLDKMKAL 545
Query: 248 ME---ADRGVVLDWTV--YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
+ ++R +W V S ++KA LR+ + N + A +
Sbjct: 546 SDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLN-AMVSIYG 604
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
+ + +L + K NL Y ++ + E E I E +S + D
Sbjct: 605 KNRMVRKVEKILSLMKESAINLSAAT--YNSLMHMYSRLGDCEKCENILTEIKSSGVRPD 662
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
N +I AY R+G + +A L + + G +P+V T+ + Y+ N+ E+ +E ++
Sbjct: 663 RYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVR 722
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 165/391 (42%), Gaps = 68/391 (17%)
Query: 136 EQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMN 195
E AS F P+K+ S LL+ Y A+ ++A ++Q+M G + YNS+++
Sbjct: 268 EMKASGFE--PDKVTFNS----LLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLIS 321
Query: 196 VYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG--------------- 240
Y + G ++ +L EME KG+ D T++ L+S A +
Sbjct: 322 SYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKP 381
Query: 241 -----------------IDKIVAMMEADR--GVVLDWTVYATAASGYVKAGLSDKALAV- 280
+++A+ + R G V D + T + + + GL + V
Sbjct: 382 NLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVF 441
Query: 281 --LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNRGYIC 333
++K+ + + Y +I+ Y+ CG D ++++KR + ++ YN
Sbjct: 442 KEMKKAGYIPERD----TYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYN----A 493
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL---IYKAQ 390
V+S+L + E AEK+F E E R+ D + L+ AY L K + L IY +
Sbjct: 494 VLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSER 553
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKK 450
+ EP+ W L+ T L N++ EA K L L + R L A + Y K
Sbjct: 554 I---EPH--NW-LVKTLVLVNSKVNNLAEAEKAFLELRQ--KRCSLDINVLNAMVSIYGK 605
Query: 451 ERDIEGADYFIKLLTGKEI-ISADLQDRLLN 480
R + + + L+ I +SA + L++
Sbjct: 606 NRMVRKVEKILSLMKESAINLSAATYNSLMH 636
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 125/305 (40%), Gaps = 29/305 (9%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
++ M++ G+ YN++++ + YK+ + EM+ G + DK TF+ LL
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF 293
A + +++ ME G Y + S YVK GL ++A+A+ ++ EV M
Sbjct: 290 KARRHDEAIEVIQEME-RVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDV 348
Query: 294 SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEK---- 349
Y +I+ G D + Y + ++ + +C ++L+K G+
Sbjct: 349 V-TYTTLISGLDRAGKIDAAI---VEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMA 404
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY- 408
+F+E+ S DI N L+ + + GL + + + + G P T+ + + Y
Sbjct: 405 VFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYS 464
Query: 409 ----------LQNNQSEKG----VEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDI 454
+ E G V L L G RW+ +++ A +ERD
Sbjct: 465 RCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEM-----EERDC 519
Query: 455 EGADY 459
+ +Y
Sbjct: 520 KPDEY 524
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y +L++ Y+ EK E I+ +++ G+ YN+++ Y + G K+ L E
Sbjct: 629 ATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSE 688
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M+ G+ D T++I + + + S E ++V M +G + Y + GY + G
Sbjct: 689 MKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYM-VTQGCKPNERTYNSIVEGYCRNG 747
Query: 273 -LSDKALAVLRKSEVLMMHNKFSR 295
L+D + V S + +H +S+
Sbjct: 748 KLTDAKIFV---SNLPQLHPGYSK 768
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 122/286 (42%), Gaps = 42/286 (14%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
++A + +M+ G + +NS+++VY + + + ++ EME G T++ L
Sbjct: 260 KEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSL 319
Query: 229 LSACAAASDGEGIDKIVAM---MEADRGVVLDWTVYATAASGYVKAGLSDKALA----VL 281
+S + DG +++ VA+ ME +G+ D Y T SG +AG D A+ ++
Sbjct: 320 IS--SYVKDGL-LEQAVALKQEMEV-KGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMV 375
Query: 282 RK----------------------SEVLMMHNKFSRA--------YDFVITQYAACGNKD 311
R E++ + ++F A ++ ++ + G
Sbjct: 376 RNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDS 435
Query: 312 DVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+V V+K K+ + R Y+ +ISS + + A +I++ + D+ N ++
Sbjct: 436 EVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVL 495
Query: 371 DAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
A R G +AE L + + R +P+ ++ + Y + +K
Sbjct: 496 SALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDK 541
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 105/243 (43%), Gaps = 38/243 (15%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
E+AE + + + G+V I YN++++ + G+++ SL ++M G D +++ L
Sbjct: 465 EEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGL 524
Query: 229 LSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLM 288
+ A DG DR ++L LS+ A ++ + V
Sbjct: 525 IKA--LCRDGN----------VDRSIML----------------LSEMAEKGIKPNNV-- 554
Query: 289 MHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESA 347
+Y+ +I++ D L + K Q L Y +I+ L K M +A
Sbjct: 555 -------SYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAA 607
Query: 348 EKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATG 407
+ E+ + ++ DI N LI +C+ LLH A L+ +A G PN RTW +M
Sbjct: 608 LNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQN 667
Query: 408 YLQ 410
+++
Sbjct: 668 FVR 670
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 130/328 (39%), Gaps = 66/328 (20%)
Query: 144 CVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNY 203
CVP + Y LL A E+A ++ ++ + +V +N+++ G
Sbjct: 273 CVPNAI----TYGFLLKGLCLASQVEEARTMLGRVPELNVVL----FNTVIGRCLLDGKL 324
Query: 204 KKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYA 262
K+ L M KG D +T+SIL+ C G + K++ ME D+G Y
Sbjct: 325 KEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAM-KLLREME-DKGFAPSIVTYT 382
Query: 263 TAASGYVKAGLSDKALAVLRKSEVLMMHNKFS---RAYDFVITQYAACGNK--DDVLRVW 317
+ + G+ D A+L +M S Y+ +I A C ++ DD +R
Sbjct: 383 ILLHSFCRNGMWDNIRAMLE----VMSDKGLSMNLEGYNGMIC--AVCKDRRMDDAMRFM 436
Query: 318 KR-----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFE-------------------- 352
+ YK ++ YN +I L + ME AE +FE
Sbjct: 437 QEMKSQGYKPDICTYNT----IIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHA 492
Query: 353 -----EWE-SRNLCHDIRIP---------NHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
W+ + +L +D+ + N LI A CR G + ++ L+ + +G +PN
Sbjct: 493 LLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPN 552
Query: 398 VRTWYLMATGYLQNNQSEKGVEAMKKAL 425
++ L+ + + + +E K+ L
Sbjct: 553 NVSYNLLISELCKTRRVRDALELSKEML 580
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 9/162 (5%)
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVLMMHNK--FSRAYDFVITQYAAC--GNKDDVLRV 316
Y T + + +A L++ R+ M+H + F I A C G D+ L +
Sbjct: 139 YNTVLAAFARADCHTDVLSLYRR----MVHRDRVPPTTFTFSIAARALCRLGRADEALTM 194
Query: 317 WKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCR 375
+ ++ V + Y VI +L G+ A + +E D+ N ++ C
Sbjct: 195 LRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCT 254
Query: 376 RGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
G L +A L+ + +RG PN T+ + G +Q E+
Sbjct: 255 LGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEA 296
>gi|255660954|gb|ACU25646.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 375
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 119/262 (45%), Gaps = 24/262 (9%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
+ AE + +++ + + + YN+M+N Y++ K L M +G + +F+I+
Sbjct: 7 DGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIM 65
Query: 229 LSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE- 285
+ D +D+++++ E + G V D Y G+ K G DK+L VL +E
Sbjct: 66 MRG---LFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQ 122
Query: 286 ---VLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRY-----KQNLKVYNRGYICVISS 337
VL + F AY +I N D L V K N+ VYN +I+
Sbjct: 123 KGGVL---DAF--AYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNT----LING 173
Query: 338 LLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPN 397
L+ E A ++F E + + I N LI+ C++ + +A L+ + +G +P
Sbjct: 174 LVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKELLDKGLDPG 233
Query: 398 VRTWYLMATGYLQNNQSEKGVE 419
V T+ ++ G +++ E+ ++
Sbjct: 234 VITYSMLMKGLCLDHKVERALQ 255
>gi|449451283|ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
gi|449519310|ref|XP_004166678.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 565
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 118/267 (44%), Gaps = 28/267 (10%)
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
DR L T +NS+++ Y + + SL M+ + D+YTF LL C AS+G+
Sbjct: 85 DRVLSPSTFLWNSLVSGYCAKLQFVDIISLYVRMKREDGAPDRYTFPSLLKVC--ASEGK 142
Query: 240 GIDKIVAMMEADR-GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYD 298
++ + R GV D V + + Y K GL D A V M + ++
Sbjct: 143 MMEGMALHGSILRCGVDEDIYVTTSLVNLYGKGGLIDCARKVFDG-----MSERNVVSWT 197
Query: 299 FVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESR 357
+I Y++ GN + R++ + N+ +N +I +K ++SAEK F+E +
Sbjct: 198 AMIVGYSSIGNLVEAKRLFDLMPERNVASWN----AIIGGYMKMGDVKSAEKAFDEMPEK 253
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
N+ +ID Y + G + A L KA E ++ W + +GY QN Q +
Sbjct: 254 NVVSFTT----MIDGYAKAGDMLSARNLFQKAP----ERDIIAWSALISGYTQNGQPNEA 305
Query: 418 VEAMKKALVLLEAGTR-WKPSKECLAA 443
V+ LE +R KP K L +
Sbjct: 306 VK------TFLEMSSRNVKPDKFVLTS 326
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 122/295 (41%), Gaps = 18/295 (6%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
IE+A S N + E P V Y ++++ + A + QM + G+ + Y S
Sbjct: 157 IEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTS 216
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA-D 251
++N +G ++ D L+ M ++ I D TF+ L+ A +G+ +D E
Sbjct: 217 LVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALID--AFVKEGKLLDAKELYNEMIQ 274
Query: 252 RGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR----AYDFVITQYAAC 307
+ + Y + +G G D+A + +M K AY +I + C
Sbjct: 275 MSIAPNIFTYTSLINGLCMEGRLDEA-----RQMFYLMETKGCFPDVVAYTSLINGFCKC 329
Query: 308 GNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIP 366
+D ++++ Q N Y +I A+++F SR + +IR
Sbjct: 330 KKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTY 389
Query: 367 NHLIDAYCRRGLLHKAETLIYKAQLR---GTEPNVRTWYLMATGYLQNNQSEKGV 418
N L+ C G ++KA + Q R G PN+RT+ ++ G N + EK +
Sbjct: 390 NVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKAL 444
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 143/336 (42%), Gaps = 33/336 (9%)
Query: 99 FSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YI 156
FS L +S W+ N+ I + + +Q +A F+ + E LPS+ +
Sbjct: 23 FSRLLGLSFWVRAFCNYR------EILRNGLHSLQ-FNEALDLFSHMVESRPLPSIIDFT 75
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
LLN A K + + + ++ G+ N +MN + Q+ S + ++ +
Sbjct: 76 RLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKL 135
Query: 217 GIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
G + D +TF+ L++ C E + + M+E G+ D +Y T K G D
Sbjct: 136 GFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEM--GIKPDVVIYTTIIDSLCKNGHVD 193
Query: 276 KALAVLRKSEVLMMHNKFSRA----YDFVITQYAACG---NKDDVLR--VWKRYKQNLKV 326
AL++ + M N R Y ++ G + D +LR + ++ K ++
Sbjct: 194 NALSLFNQ-----MENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVIT 248
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
+N +I + +K + A++++ E ++ +I LI+ C G L +A +
Sbjct: 249 FNA----LIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMF 304
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
Y + +G P+V + + G+ + + E +AMK
Sbjct: 305 YLMETKGCFPDVVAYTSLINGFCKCKKVE---DAMK 337
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 30/219 (13%)
Query: 70 LLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLI 129
L+D +V+EG+ LD ++L ++ +Q+S+ + T + L +
Sbjct: 252 LIDAFVKEGKLLDAKEL------------YNEMIQMSIAPN-----IFTYTSLINGLCME 294
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
+ +++A F + K P V Y +L+N + K E A I +M +GL T
Sbjct: 295 GR---LDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNT 351
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
I Y +++ + G + M +G+ + T+++LL +G+ ++K + +
Sbjct: 352 ITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLH--CLCYNGK-VNKALMI 408
Query: 248 MEADR-----GVVLDWTVYATAASGYVKAGLSDKALAVL 281
E + GV + Y G G +KAL V
Sbjct: 409 FEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVF 447
>gi|218191262|gb|EEC73689.1| hypothetical protein OsI_08260 [Oryza sativa Indica Group]
Length = 595
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 109/258 (42%), Gaps = 39/258 (15%)
Query: 158 LLNAYACAK---------SAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
L++ ++C+K + + A + + M + +V I Y+ ++++Y Q G+ K
Sbjct: 277 LVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHL 336
Query: 209 LMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
H+M ++G+ D ++IL++ C A E V M + G+ D Y G
Sbjct: 337 WFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQM--TNLGIKPDVIAYTVLLDG 394
Query: 268 YVKAGLSD--KALAVLRKSEVLMM-HNK-FSRAYDFVITQYAACGNKDDVLRVWKRYKQN 323
++K L + +A R+S +L HNK S D I C
Sbjct: 395 HLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPC---------------- 438
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
Y +I K + + A ++F+E + L D LI+ YC +G + KAE
Sbjct: 439 -------YTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAE 491
Query: 384 TLIYKAQLRGTEPNVRTW 401
L+ + +G EP+ T+
Sbjct: 492 DLLQEMIDKGIEPDELTF 509
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 143/328 (43%), Gaps = 19/328 (5%)
Query: 111 KKSNFVLTPADVAIRLDLIAKVQGIEQAASYFN---C---VPEKLKLPSVYIALLNAYAC 164
K S L I +D K + +A N C P+K+ Y L+N Y
Sbjct: 97 KDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKCGGLTPDKIH----YTCLINGYCL 152
Query: 165 AKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYT 224
+ A+ + ++M + + YN + + + ++G ++ L+ M ++G++ + T
Sbjct: 153 KGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLT 212
Query: 225 FSI-LLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA-LAVLR 282
+ I ++ C + E +++ + ++G+ +Y++ GY+ +G +D A + +R
Sbjct: 213 YGIAIVGFCRGGNLSEA--EVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVR 270
Query: 283 KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK-RYKQNLKVYNRGYICVISSLLKF 341
+ + + FS + +I GN V K + N+ Y +IS +
Sbjct: 271 VARQGNLVDHFSCSK--LINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQN 328
Query: 342 DGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
M+ A F + R L D+ + L++ YC+ G L +A L + G +P+V +
Sbjct: 329 GDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAY 388
Query: 402 YLMATGYLQNN--QSEKGVEAMKKALVL 427
++ G+L+ Q +G+ +++ +L
Sbjct: 389 TVLLDGHLKETLQQGWEGIAKERRSFLL 416
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 6/232 (2%)
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL-SACAAASDGEGIDKIVAMM 248
YN +M+ + + + L+ +G + D Y +S L+ S C + + +D AM+
Sbjct: 3 YNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMV 62
Query: 249 EADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACG 308
G+ + + + + K G++ + +A K + +H Y+ + Y G
Sbjct: 63 S--HGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLD-KVIYNIAMDTYCKNG 119
Query: 309 NKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPN 367
N ++ +++ K L Y C+I+ M++A+++FEE N+ DI N
Sbjct: 120 NMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYN 179
Query: 368 HLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ-NNQSEKGV 418
L +C+ GL+ + L+ + +G EPN T+ + G+ + N SE V
Sbjct: 180 ILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEV 231
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 112/271 (41%), Gaps = 44/271 (16%)
Query: 177 QMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAAS 236
+ +D GL + YN M+ Y + GN + L++EM+ G+ DK ++ L++
Sbjct: 95 KFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKG 154
Query: 237 DGEGIDKIV-AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK------------ 283
+ + ++ M++A+ + D Y ASG+ K+GL + +L +
Sbjct: 155 EMQNAQQVFEEMLKAN--IEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLT 212
Query: 284 --------------SEVLMMHNKF-SRAYDFVITQYAA--CGNKDDVLRVW--KRYKQNL 324
SE ++ N + D + Y++ CG +L W Y +
Sbjct: 213 YGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGY---LLSGWTDHAYMLFV 269
Query: 325 KVYNRG-----YIC--VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRG 377
+V +G + C +I+ L + ++ A + + N+ D+ + LI YC+ G
Sbjct: 270 RVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNG 329
Query: 378 LLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
+ KA + RG +V + ++ GY
Sbjct: 330 DMDKAHLWFHDMVQRGLSIDVIVYTILMNGY 360
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P V Y L++ A+ +A + +M +GL Y +++N Y G K + L
Sbjct: 434 PDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDL 493
Query: 210 MHEMEEKGIDCDKYTFS 226
+ EM +KGI+ D+ TFS
Sbjct: 494 LQEMIDKGIEPDELTFS 510
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 123/260 (47%), Gaps = 12/260 (4%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y A++NAY + S ++A + M G + +N+++ + ++ + K + + +
Sbjct: 91 LYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVL 150
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ K + + Y+F I+++ C A + +++A++E + G+ + +Y T G K G
Sbjct: 151 KSK-VVLNAYSFGIMITGCCEAGYFVRVFRLLAVLE-EFGLSPNVVIYTTLIDGCCKNG- 207
Query: 274 SDKALA---VLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR- 329
D LA + + ++ N+ Y ++ + G + + ++++ ++ V N
Sbjct: 208 -DVMLAKNLFCKMDRLGLVPNQ--HTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAY 264
Query: 330 GYICVISSLLKFDGM-ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y C+IS DGM + A K+F E + + + N LI CR +A L++K
Sbjct: 265 AYNCLISEYCN-DGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK 323
Query: 389 AQLRGTEPNVRTWYLMATGY 408
G PN+ T+ ++ G+
Sbjct: 324 VNKVGLSPNIVTYNILINGF 343
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 101/274 (36%), Gaps = 48/274 (17%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N + + + + M G+V YN +++ Y G K + EM
Sbjct: 231 YSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMR 290
Query: 215 EKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
EKGI C T++IL+ C GE + K+V + K GL
Sbjct: 291 EKGIACGVMTYNILIGGLCRGKKFGEAV-KLVHKVN--------------------KVGL 329
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN-----LKVYN 328
S + Y+ +I + G D +R++ + K + L YN
Sbjct: 330 SPNIVT-----------------YNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYN 372
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+I+ K + + A + +E E R + LIDA+ R KA +
Sbjct: 373 T----LIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSL 428
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ G P+V T+ ++ G N ++ + K
Sbjct: 429 MEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFK 462
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 4/189 (2%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+N + + A + Q++ GL + YN+++ Y + N L+ EME
Sbjct: 336 YNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEME 395
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
E+ I K T++IL+ A A + + ++ ++ME G+V D Y+ G G
Sbjct: 396 ERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKS-GLVPDVYTYSVLIHGXCVNGNM 454
Query: 275 DKALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYIC 333
+A + E+ + N S Y+ +I Y G+ LR+ + V N C
Sbjct: 455 KEASKPFKSLGEMHLQPN--SVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFC 512
Query: 334 VISSLLKFD 342
LL D
Sbjct: 513 STMGLLCRD 521
>gi|222623336|gb|EEE57468.1| hypothetical protein OsJ_07708 [Oryza sativa Japonica Group]
Length = 335
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 39/268 (14%)
Query: 158 LLNAYACAK---------SAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
L++ ++C+K + + A + + M + +V I Y+ ++++Y Q G+ K
Sbjct: 86 LVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHL 145
Query: 209 LMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
H+M ++G+ D ++IL++ C A E V M + G+ D Y G
Sbjct: 146 WFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQM--TNLGIKPDVIAYTVLLDG 203
Query: 268 YVKAGLSD--KALAVLRKSEVLMM-HNK-FSRAYDFVITQYAACGNKDDVLRVWKRYKQN 323
++K L + +A R+S +L HNK S D I C
Sbjct: 204 HLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPC---------------- 247
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
Y +I K + + A ++F+E + L D LI+ YC +G + KAE
Sbjct: 248 -------YTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAE 300
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQN 411
L+ + +G EP+ T+ ++ L++
Sbjct: 301 DLLQEMIDKGIEPDELTFSVLNQSSLRS 328
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ A+ +A + +M +GL Y +++N Y G K + L+ EM
Sbjct: 248 YTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMI 307
Query: 215 EKGIDCDKYTFSIL 228
+KGI+ D+ TFS+L
Sbjct: 308 DKGIEPDELTFSVL 321
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 38/266 (14%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVK-KTIDYNSMMNVYYQTGNYKKLDSLMHEMEE 215
AL++A A +AE + + G +K +T YN+++ Y + + K + ++ EM +
Sbjct: 268 ALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQ 327
Query: 216 KGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
G+ D+ T+S+L+ A A E ++ MEAD GV V++ +G+ G
Sbjct: 328 CGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD-GVKPSSYVFSRILAGFRDRGDWQ 386
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVI 335
KA AVLR+ + A G + D Y +I
Sbjct: 387 KAFAVLREMQ--------------------ASGVRPD---------------RHFYNVMI 411
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
+ K++ + A F + + D+ N LIDA+C+ G +A L + +
Sbjct: 412 DTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCP 471
Query: 396 PNVRTWYLMATGYLQNNQSEKGVEAM 421
P T+ +M L + +GVEAM
Sbjct: 472 PGTTTYNIM-INLLGEQEHWEGVEAM 496
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 5/279 (1%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y ALL Y S + AE ++ +M G+ Y+ +++ Y + G ++ L+ EM
Sbjct: 301 AYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEM 360
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
E G+ Y FS +L+ D + ++ M+A GV D Y + K
Sbjct: 361 EADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQAS-GVRPDRHFYNVMIDTFGKYNC 419
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYI 332
A+ K + ++ +I + G D +++ ++ N Y
Sbjct: 420 LGHAMDAFNKMREEGIEPDVV-TWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYN 478
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I+ L + + E E + E + + L +I L+D Y R G +A I +
Sbjct: 479 IMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD 538
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKGV--EAMKKALVLLE 429
G +P+ ++ + Y Q + + KAL+ +E
Sbjct: 539 GLKPSPTMYHALVNAYAQRGLRPDVITYTTLMKALIRVE 577
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/169 (18%), Positives = 74/169 (43%), Gaps = 3/169 (1%)
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV 316
D +++ S + +A L D AL +L ++ + + + S A +I+ G + +
Sbjct: 227 DAPLFSDLISAFARAALPDAALELLASAQAIGLTPR-SNAVTALISALGTAGRVAEAEAL 285
Query: 317 WKRY--KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
+ + +K R Y ++ ++ +++AE++ +E + D + L+DAY
Sbjct: 286 FLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYT 345
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
R G A L+ + + G +P+ + + G+ +K +++
Sbjct: 346 RAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLRE 394
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
NC P + Y ++N + E E ++ +M+++GLV I Y ++++VY ++G
Sbjct: 469 NCPPGT----TTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGR 524
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
YK+ + M+ G+ + L++A A
Sbjct: 525 YKEAIDCIEAMKADGLKPSPTMYHALVNAYA 555
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 136/322 (42%), Gaps = 4/322 (1%)
Query: 81 LDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAAS 140
+++E II++K+ ++F A+ + + +K V A L + K + + +A
Sbjct: 135 VNVETFGIIMRKYARAQKFDEAVY-TFNIMEKYGVVPNLAAFNSLLGALCKSKNVRKAQE 193
Query: 141 YFNCVPEKLKLPS-VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQ 199
F+ + + + Y LL + A + K + +M D G + Y M++ +
Sbjct: 194 IFDKMNGRFNPDAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCK 253
Query: 200 TGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWT 259
TG ++ ++ +M +G + +S+L+ E ME D G+V D
Sbjct: 254 TGRVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEKD-GIVPDVV 312
Query: 260 VYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR 319
VY + + K + A V+ E + SR ++ ++ + + G D+ RV++R
Sbjct: 313 VYNALVTAFCKVKKFENAFRVMDDMEGHGIAPN-SRTWNIILNKLISLGKDDEAYRVFRR 371
Query: 320 YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
+ + + Y +I + D +E A K+++ + + + LI+ C +G +
Sbjct: 372 MIKRCQPDSDTYTMMIKMFCENDNVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEV 431
Query: 380 HKAETLIYKAQLRGTEPNVRTW 401
+A L+ +G P T+
Sbjct: 432 SQACVLLEDMIEKGIRPPGSTF 453
>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Glycine max]
Length = 618
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 149/377 (39%), Gaps = 40/377 (10%)
Query: 56 MLSPMGDPND-SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSN 114
+++ M DPND + L+ + +EG ++ L ++ K F +
Sbjct: 232 LMNEMEDPNDVTFNILISGYCKEGN--SVQALVLLEKSFSM------------------G 271
Query: 115 FVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAE 172
FV V L+++ +AA V L V Y L+ + A +
Sbjct: 272 FVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGL 331
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA- 231
++QM ++G + YN +++ + ++G L ++M+ GI + TF L+
Sbjct: 332 HFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGL 391
Query: 232 CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHN 291
C+ +G + M E+ G + Y + G +K D++ L K M N
Sbjct: 392 CSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTK-----MGN 446
Query: 292 KFSRAYD--FVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNRGYICVISSLLKFDGM 344
F RA D +I ++ G +D RV+ + ++ VYN C++ K +
Sbjct: 447 LFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYN----CLVHGFSKQGNV 502
Query: 345 ESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
A ++ E + N N +I +CR+G + A L+ RG PN T+ +
Sbjct: 503 REAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNTETYSPL 562
Query: 405 ATGYLQNNQSEKGVEAM 421
+N +K ++
Sbjct: 563 IDVLCRNGDLQKAMQVF 579
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 132/324 (40%), Gaps = 26/324 (8%)
Query: 97 KRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPS--- 153
K S AL+ W + NFV + + + + + + + +P L P
Sbjct: 47 KSASEALEYFRWASTVPNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDD 106
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++I ++ A+ ++ + +NS+++V + + M
Sbjct: 107 IFITIIRGLGRARMTRTVIKVLDLVYKFHGSPSLKIFNSILDVLVKEDIDMAREFYRKSM 166
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
G++ D YTF IL+ C GEG K++ ++++ RGV + VY T + G
Sbjct: 167 MASGVEGDDYTFGILMKGLCLTNRIGEGF-KLLQLIKS-RGVAPNTVVYNTLLHALCRNG 224
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYI 332
+A ++ + M + ++ +I+ Y GN L + + K ++ G++
Sbjct: 225 KVGRARNLMNE-----MEDPNDVTFNILISGYCKEGNSVQALVLLE------KSFSMGFV 273
Query: 333 CVISSLLKF--------DGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAET 384
+ S+ K ME+AE + E ES D+ N LI +C G +
Sbjct: 274 PDVVSVTKVLEILCNAGRTMEAAE-VLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLH 332
Query: 385 LIYKAQLRGTEPNVRTWYLMATGY 408
+ + + +G PNV T+ ++ +G+
Sbjct: 333 FLKQMENKGCLPNVDTYNVLISGF 356
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 56/321 (17%), Positives = 130/321 (40%), Gaps = 28/321 (8%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
L++ Y ++ +A +++++ G V + ++ + G + ++ +E G
Sbjct: 247 LISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMG 306
Query: 218 IDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
D ++ L+ C A G+ + M ++G + + Y SG+ ++G+ D
Sbjct: 307 GLLDVVAYNTLIKGFCGAGKVKVGLHFLKQM--ENKGCLPNVDTYNVLISGFSESGMLDL 364
Query: 277 ALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD---VLRVWKRYKQNLKVYNRGYIC 333
AL + + + F +D +I + +D +L + + K+ + + Y
Sbjct: 365 ALDLFNDMKTDGIKWNFV-TFDTLIRGLCSEERIEDGFSILELMEESKEGSRGHISPYNS 423
Query: 334 VISSLLKFDGM-ESAE------KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
+I LLK +G ESAE +F R+L +I +C++G + A+ +
Sbjct: 424 IIYGLLKKNGFDESAEFLTKMGNLFPRAVDRSL---------MILEHCKKGAIEDAKRVY 474
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLG 446
+ G P++ + + G+ + + VE M + + P A +
Sbjct: 475 DQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMI-----ANNCFPIPSTFNAVIT 529
Query: 447 YYKKERDIEGADYFIKLLTGK 467
+ ++ +E A ++ +T +
Sbjct: 530 GFCRQGKVESALKLVEDITAR 550
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 122/279 (43%), Gaps = 27/279 (9%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P Y +++ A +++ M G+V + ++M+ + + G+ +
Sbjct: 320 PVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFD 379
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
EM+++G+ D T++ L++ A + + ++++ ME D+G+ +D Y GY K
Sbjct: 380 EMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME-DKGLDVDAVTYTVLIDGYCKV 438
Query: 272 GLSDKALAVLRKSEVLMMHNKF--SRAYDFVITQYA----ACGNKD-----DVLR--VWK 318
G + +E ++HNK R V+T A C D ++L K
Sbjct: 439 G---------KMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489
Query: 319 RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
+ N+ YN +I+ L K +E A + + + L D+ +I A C+
Sbjct: 490 GLELNIFTYNS----LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
L +A +L+ + +G +P + T+ ++ G+ + + E G
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 584
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 130/294 (44%), Gaps = 20/294 (6%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
E+A + ++M+ G + YN++++VY ++ ++ ++ EME G T++ L
Sbjct: 308 EEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSL 367
Query: 229 LSACAAASDG---EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
+S A A DG E ++ M++ +G+ D Y T SG+ K G D A+ V +
Sbjct: 368 IS--AYARDGLLDEAMELKSQMVK--KGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMR 423
Query: 286 VLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGME 345
V ++ +I + GN ++++V++ K V + + ++ +GM+
Sbjct: 424 VAGCQPNIC-TFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMD 482
Query: 346 S-AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
S +F+E + + N LI AY R G +A + + G P++ T+ +
Sbjct: 483 SEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAV 542
Query: 405 ATGYLQNN---QSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIE 455
+ QSEK + MK R KP++ + L Y +++E
Sbjct: 543 LAALARGGLWEQSEKVLAEMKDG--------RCKPNELTYCSLLHAYANGKEVE 588
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 160/364 (43%), Gaps = 31/364 (8%)
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
++V G+ + VPE+ + L++AY+ ++A I ++M D G+
Sbjct: 483 SEVSGVFKEMKRAGFVPER----DTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLST 538
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
YN+++ + G +++ + ++ EM++ ++ T+ LL A A +G+ ++++ A+ E
Sbjct: 539 YNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYA---NGKEVERMSALAE 595
Query: 250 ADRGVVLD--WTVYATAASGYVKAGL---SDKALAVLRK---SEVLMMHNKFSRAYDFVI 301
+++ + T Y K+ L +++A LR+ S + N Y
Sbjct: 596 EIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYG--- 652
Query: 302 TQYAACGNKDDVLRVWKR--YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
+ +++L K + +L YN ++ + + E +E I E ++ +
Sbjct: 653 -RRRMVSKTNEILNFIKDSGFTPSLTTYN----SLMYMYSRTEHFEKSEDILREIIAKGM 707
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
DI N +I AYCR G + +A + + + G P+V T+ Y ++ +E
Sbjct: 708 KPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMF---IE 764
Query: 420 AMKKALVLLEAGTRWKPSKECLAACLGYY-KKERDIEGADYFIKLLTGKEIISADLQDRL 478
A+ +++ G KP++ + + ++ K R E + + L ++ D + RL
Sbjct: 765 AIDVVKYMIKNGC--KPNQNTYNSLIDWFCKLNRRDEASSFISNLRNLDPSVTKDEERRL 822
Query: 479 LNNI 482
L +
Sbjct: 823 LERL 826
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 111/276 (40%), Gaps = 39/276 (14%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
SV +++ A A ++ +R+ G+ Y S++ Y G Y++ + +
Sbjct: 186 SVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKK 245
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVK 270
+EE+G T++++L+ G KI ++++ GV D Y T S +
Sbjct: 246 LEEEGCRPTLITYNVILNVYGKM--GMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRR 303
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG 330
L ++A V + + AA + D V Y L VY +
Sbjct: 304 GSLYEEAAEVFEEMK-------------------AAGFSPDKVT-----YNALLDVYGK- 338
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
S + ME + +E E+ I N LI AY R GLL +A L +
Sbjct: 339 ------SRRPREAME----VLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMV 388
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
+G +P+V T+ + +G+ + + + ++ ++ V
Sbjct: 389 KKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRV 424
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 128/274 (46%), Gaps = 15/274 (5%)
Query: 152 PSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+VY L++A ++A+ ++ M G+ + YN++M+ Y G + +
Sbjct: 218 PNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQM 277
Query: 210 MHEMEEKGIDCDKYTFSILLS-ACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
H M +KG++ + Y+++I++ C + E ++ + ++ + +V + Y++ G+
Sbjct: 278 FHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLH--KNMVPNTVTYSSLIDGF 335
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQY--AACGNK--DDVLRVWKRYKQ-N 323
K G AL +L++ M+++ A T A C N+ D ++ + K+
Sbjct: 336 CKLGRITSALDLLKE-----MYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG 390
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
++ Y +I L K ++A+K+F+ + ++ N +I C+ G+L +A
Sbjct: 391 IQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEAL 450
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
+ K + G P+ T+ ++ + +Q++K
Sbjct: 451 AMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKA 484
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 129/315 (40%), Gaps = 5/315 (1%)
Query: 115 FVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAE 172
F + A L+ + K+ A + ++ P+V Y +++ K +A
Sbjct: 111 FQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAY 170
Query: 173 IIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAC 232
+ +M RG+ I Y++++ + G + L++EM K I+ + YT++IL+ A
Sbjct: 171 DLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDAL 230
Query: 233 AAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNK 292
+ ++A+M + GV + Y T GY G A + + V N
Sbjct: 231 CKEGKVKEAKNLLAVMTKE-GVKPNVVSYNTLMDGYCLIGEVQNAKQMFH-TMVQKGVNP 288
Query: 293 FSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIF 351
+Y+ +I + D+ + + + +N+ Y +I K + SA +
Sbjct: 289 NVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLL 348
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
+E R D+ L+DA C+ L KA L K + RG +PN T+ + G +
Sbjct: 349 KEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKG 408
Query: 412 NQSEKGVEAMKKALV 426
+ + + + LV
Sbjct: 409 GRHKNAQKLFQHLLV 423
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 98/256 (38%), Gaps = 79/256 (30%)
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA---------------- 231
+++N ++ + +Y SL +M+ KGI+ D +T +IL++
Sbjct: 11 MEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGK 70
Query: 232 --------------------CAAASDGEGI---DKIVAMMEADRGVVLDWTVYATAASGY 268
C + + DK+VA +G +D YAT +G
Sbjct: 71 ILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVA-----QGFQMDQVSYATLLNGL 125
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
K G + AL +LR M+ ++ +R N+ +YN
Sbjct: 126 CKIGETRSALKLLR-----MIEDRSTRP--------------------------NVVMYN 154
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+I L K + A ++ E ++R + ++ + LI +C G L +A L+ +
Sbjct: 155 T----IIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNE 210
Query: 389 AQLRGTEPNVRTWYLM 404
L+ PNV T+ ++
Sbjct: 211 MILKNINPNVYTYTIL 226
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 5/137 (3%)
Query: 119 PADVAI---RLDLIAKVQGIEQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEI 173
PADV LD + K Q +++A + F + E+ P+ Y AL++ + A+
Sbjct: 357 PADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQK 416
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ Q + +G YN M++ + G + ++ +MEE G D TF I++ +
Sbjct: 417 LFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLF 476
Query: 234 AASDGEGIDKIVAMMEA 250
+ +K++ M A
Sbjct: 477 EKDQNDKAEKLLHEMIA 493
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 150/324 (46%), Gaps = 19/324 (5%)
Query: 119 PADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQM 178
P +A + ++A+ + +A++ + P Y AL++A++ A A + ++M
Sbjct: 123 PRVLATAIRVMARAGRLAEASALLDAAPGPDA--GAYTALVSAFSRAGRFRDAVAVFRRM 180
Query: 179 RDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
D G+ + YN +++VY + +K++ L+ M+E G+ D+YT++ L+S C +
Sbjct: 181 VDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRAL 240
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY 297
+ ++ M+A G D + + Y KA D+A+ V+++ E + Y
Sbjct: 241 YKEAAQVFDEMKAS-GFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVV-TY 298
Query: 298 DFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-----GYICVISSLLKFDGMESAEKIFE 352
+ +I+ Y KD +L KQ ++V Y +IS L + +++A ++
Sbjct: 299 NSLISSYV----KDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYD 354
Query: 353 EWESRNLCH-DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
E RN C ++ N LI + RG + + + + G P++ TW + + QN
Sbjct: 355 EM-VRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQN 413
Query: 412 --NQSEKGV-EAMKKALVLLEAGT 432
+ GV + MKKA + E T
Sbjct: 414 GLDSEVSGVFKEMKKAGYIPERDT 437
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 137/300 (45%), Gaps = 15/300 (5%)
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
L ++V G+ + +PE+ Y++L+++Y+ + A I ++M + G+
Sbjct: 415 LDSEVSGVFKEMKKAGYIPER----DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDV 470
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
YN++++ + G +++ + L EMEE+ D+Y++S LL A A A + +DK+ A+
Sbjct: 471 STYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANA---KRLDKMKAL 527
Query: 248 ME---ADRGVVLDWTV--YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
+ ++R +W V S ++KA LR+ + N + A +
Sbjct: 528 SDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLN-AMVSIYG 586
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
+ + +L + K NL Y ++ + E E I E +S + D
Sbjct: 587 KNRMVRKVEKILSLMKESAINLSAAT--YNSLMHMYSRLGDCEKCENILTEIKSSGVRPD 644
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
N +I AY R+G + +A L + + G +P+V T+ + Y+ N+ E+ +E ++
Sbjct: 645 RYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVR 704
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 165/391 (42%), Gaps = 68/391 (17%)
Query: 136 EQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMN 195
E AS F P+K+ S LL+ Y A+ ++A ++Q+M G + YNS+++
Sbjct: 250 EMKASGFE--PDKVTFNS----LLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLIS 303
Query: 196 VYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEG--------------- 240
Y + G ++ +L EME KG+ D T++ L+S A +
Sbjct: 304 SYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKP 363
Query: 241 -----------------IDKIVAMMEADR--GVVLDWTVYATAASGYVKAGLSDKALAV- 280
+++A+ + R G V D + T + + + GL + V
Sbjct: 364 NLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVF 423
Query: 281 --LRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNRGYIC 333
++K+ + + Y +I+ Y+ CG D ++++KR + ++ YN
Sbjct: 424 KEMKKAGYIPERD----TYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYN----A 475
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETL---IYKAQ 390
V+S+L + E AEK+F E E R+ D + L+ AY L K + L IY +
Sbjct: 476 VLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSER 535
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKK 450
+ EP+ W L+ T L N++ EA K L L + R L A + Y K
Sbjct: 536 I---EPH--NW-LVKTLVLVNSKVNNLAEAEKAFLELRQ--KRCSLDINVLNAMVSIYGK 587
Query: 451 ERDIEGADYFIKLLTGKEI-ISADLQDRLLN 480
R + + + L+ I +SA + L++
Sbjct: 588 NRMVRKVEKILSLMKESAINLSAATYNSLMH 618
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 125/305 (40%), Gaps = 29/305 (9%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
++ M++ G+ YN++++ + YK+ + EM+ G + DK TF+ LL
Sbjct: 212 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 271
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF 293
A + +++ ME G Y + S YVK GL ++A+A+ ++ EV M
Sbjct: 272 KARRHDEAIEVIQEME-RVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDV 330
Query: 294 SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEK---- 349
Y +I+ G D + Y + ++ + +C ++L+K G+
Sbjct: 331 V-TYTTLISGLDRAGKIDAAI---VEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMA 386
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY- 408
+F+E+ S DI N L+ + + GL + + + + G P T+ + + Y
Sbjct: 387 VFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYS 446
Query: 409 ----------LQNNQSEKG----VEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDI 454
+ E G V L L G RW+ +++ A +ERD
Sbjct: 447 RCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEM-----EERDC 501
Query: 455 EGADY 459
+ +Y
Sbjct: 502 KPDEY 506
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y +L++ Y+ EK E I+ +++ G+ YN+++ Y + G K+ L E
Sbjct: 611 ATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSE 670
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M+ G+ D T++I + + + S E ++V M +G + Y + GY + G
Sbjct: 671 MKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYM-VTQGCKPNERTYNSIVEGYCRNG 729
Query: 273 -LSDKALAVLRKSEVLMMHNKFSR 295
L+D + V S + +H +S+
Sbjct: 730 KLTDAKIFV---SNLPQLHPGYSK 750
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 122/286 (42%), Gaps = 42/286 (14%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
++A + +M+ G + +NS+++VY + + + ++ EME G T++ L
Sbjct: 242 KEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSL 301
Query: 229 LSACAAASDGEGIDKIVAM---MEADRGVVLDWTVYATAASGYVKAGLSDKALA----VL 281
+S + DG +++ VA+ ME +G+ D Y T SG +AG D A+ ++
Sbjct: 302 IS--SYVKDGL-LEQAVALKQEMEV-KGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMV 357
Query: 282 RK----------------------SEVLMMHNKFSRA--------YDFVITQYAACGNKD 311
R E++ + ++F A ++ ++ + G
Sbjct: 358 RNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDS 417
Query: 312 DVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+V V+K K+ + R Y+ +ISS + + A +I++ + D+ N ++
Sbjct: 418 EVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVL 477
Query: 371 DAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
A R G +AE L + + R +P+ ++ + Y + +K
Sbjct: 478 SALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDK 523
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 125/287 (43%), Gaps = 17/287 (5%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKL----KLPSVYI--ALLNAYACAKSAEKAEIIMQQMR 179
D+I KV + + CV + + ++PS+ +LL+ A KA ++ +QM
Sbjct: 189 FDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMI 248
Query: 180 DRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGE 239
G++ Y M+N Y + G + + + EME + + T++ L+ + D
Sbjct: 249 ALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVC 308
Query: 240 GIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF--SRAY 297
G K++A+M +++G+ + Y GY K G ++A ++ +M N F Y
Sbjct: 309 GAKKVLALM-SEKGIPENSRTYTLLIKGYCKRGQMEQAEKLI---GCMMEKNLFVDEHVY 364
Query: 298 DFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYIC--VISSLLKFDGMESAEKIFEEW 354
+I Y G DD LR+ K LK+ IC +I+ K + A ++
Sbjct: 365 GVLIHAYCTAGRVDDALRIRDAMLKVGLKM--NTVICNSLINGYCKLGHVNKAAEVLVSM 422
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTW 401
+ NL D N L+D +C++ KA L + +G V T+
Sbjct: 423 KDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTY 469
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 119/293 (40%), Gaps = 21/293 (7%)
Query: 135 IEQAASYFNCVPEKLKL--PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
+EQA C+ EK VY L++AY A + A I M GL T+ NS
Sbjct: 342 MEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNS 401
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
++N Y + G+ K ++ M++ + D Y ++ LL D K+ M ++
Sbjct: 402 LINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMH-NK 460
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF----SRAYDFVITQYAACG 308
GV Y T G + AL + +MH + Y ++ + G
Sbjct: 461 GVNFTVVTYNTLLKNLFHVGHVEHALHIWN-----LMHKRGVAPNEVTYCTLLDAFFKVG 515
Query: 309 NKDDVLRVWKR-----YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDI 363
D + +WK + +++ +YN +I K + + A++IF + + D
Sbjct: 516 TFDRAMMIWKDALSKGFTKSITLYNT----MICGFCKMEKLVQAQEIFLKMKELGFPPDE 571
Query: 364 RIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
LID YC+ G L +A L ++ G + + + TG ++ + +K
Sbjct: 572 ITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQK 624
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 131/317 (41%), Gaps = 11/317 (3%)
Query: 151 LPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
LP + Y ++NAY ++A +++M + YNS+++ Y G+
Sbjct: 253 LPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKK 312
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
++ M EKGI + T+++L+ E +K++ M ++ + +D VY Y
Sbjct: 313 VLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCM-MEKNLFVDEHVYGVLIHAY 371
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAY-DFVITQYAACGNKDDVLRVWKRYKQ-NLKV 326
AG D AL + + +L + K + + +I Y G+ + V K NLK
Sbjct: 372 CTAGRVDDALRI--RDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKP 429
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
+ GY ++ K + A K+ +E ++ + + N L+ G + A +
Sbjct: 430 DSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIW 489
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLG 446
RG PN T+ + + + ++ + K A L G + C G
Sbjct: 490 NLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDA---LSKGFTKSITLYNTMIC-G 545
Query: 447 YYKKERDIEGADYFIKL 463
+ K E+ ++ + F+K+
Sbjct: 546 FCKMEKLVQAQEIFLKM 562
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 113/277 (40%), Gaps = 36/277 (12%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEK 216
+L+N Y KA ++ M+D L + YN++++ + + ++ K L EM K
Sbjct: 401 SLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNK 460
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
G++ T++ LL E I +M RGV + Y T + K G D+
Sbjct: 461 GVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHK-RGVAPNEVTYCTLLDAFFKVGTFDR 519
Query: 277 ALAVLRK------SEVLMMHN----------KFSRA------------------YDFVIT 302
A+ + + ++ + ++N K +A Y +I
Sbjct: 520 AMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLID 579
Query: 303 QYAACGNKDDVLRVWKRYKQN-LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCH 361
Y GN + L++ +++ + Y +I+ + + + ++ + E ++R L
Sbjct: 580 GYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSP 639
Query: 362 DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNV 398
++ LI +C +G++ KA +K +G PN+
Sbjct: 640 NVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNI 676
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 133/337 (39%), Gaps = 48/337 (14%)
Query: 129 IAKVQGIEQAASYFNCVPEKLKLPS---VYIALLNAYACAKSAEKAEIIMQQMRDR-GLV 184
K++ + QA F + E L P Y L++ Y C + ++ M +R G+
Sbjct: 546 FCKMEKLVQAQEIFLKMKE-LGFPPDEITYRTLIDGY-CKVGNLVEALKLKDMSERDGIS 603
Query: 185 KKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDK 243
T YNS++ +++ +KL+ L+ EM+ + + + T+ L++ C + +
Sbjct: 604 SSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNA 663
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVL---------------------- 281
M+ D+G+ + + + S + G D+A +L
Sbjct: 664 YFKMI--DKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSD 721
Query: 282 -RKSEVLMMHNKFSR-----------AYDFVITQYAACGNKDDVLRVWKRYKQNLKVY-- 327
R E + + F + Y+ IT N DDV R+ LK +
Sbjct: 722 LRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLL--LKGFCP 779
Query: 328 -NRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
N Y +I + + A + ++ + L +I + N LI+ C+ G L +A L
Sbjct: 780 DNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLF 839
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
K +G P V T+ + GY + ++ + +E K
Sbjct: 840 NKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDK 876
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +L++A + +A + M + GLV + YN+++N ++GN + L +++
Sbjct: 784 YCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLA 843
Query: 215 EKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
KG+ T++ L+ C E ++ M E G+ Y+T G G
Sbjct: 844 RKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMRE--EGICPSSITYSTLIHGLYMEGK 901
Query: 274 SDKALAVLRK 283
S++++ +L +
Sbjct: 902 SEQSVGLLNE 911
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 323 NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
N+ VYN +I+ L K ++ A ++F + + L + N LID YC+ G +A
Sbjct: 815 NIVVYN----ALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEA 870
Query: 383 ETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
L K + G P+ T+ + G +SE+ V
Sbjct: 871 LELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSV 906
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
VY AL+N + + ++A + ++ +GL + YN++++ Y + G + L +M
Sbjct: 818 VYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKM 877
Query: 214 EEKGIDCDKYTFSILLSACAAASDGE-GIDKIVAMMEADRG-VVLDWTVYATAASGYVK 270
E+GI T+S L+ E + + MM+A +G V+D V A YVK
Sbjct: 878 REEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGKGSSVMDPLV----ARAYVK 932
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 138/349 (39%), Gaps = 47/349 (13%)
Query: 83 MEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPA--DVAIRLDLIAKVQGIEQAAS 140
+ L ++ F KR+ L +M+ +S + + P I + + K +E A
Sbjct: 165 VRSLNTLLNAFVQNKRYD--LVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVK 222
Query: 141 YFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYY 198
+ +P +P+V Y +L Y+ A + ++ DRG + Y +MN Y
Sbjct: 223 VLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYC 282
Query: 199 QTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLD 257
+ G LM +M E G++ ++ T+ +++ A C GE + + M+E
Sbjct: 283 EQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQ------ 336
Query: 258 WTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVW 317
Y +++ K VI G ++ +W
Sbjct: 337 ---YVPSSALCCK-----------------------------VIDVLCEAGKIEEACELW 364
Query: 318 KR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRR 376
KR K+N N +I L K + A K+F E+E R + N LI C +
Sbjct: 365 KRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFE-RGAIPSLLTYNTLIAGMCEK 423
Query: 377 GLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
G L +A L +G +PN T+ ++ G+ + +++G+ +++ L
Sbjct: 424 GELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEML 472
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Query: 147 EKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK 204
E+ +PS+ Y L+ +A + M ++G YN ++ + + GN K
Sbjct: 403 ERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAK 462
Query: 205 KLDSLMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLD-WTVYA 262
+ ++ EM + +K T++IL+ C +GE +DK+V+M A GV D W ++
Sbjct: 463 EGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGE-VDKVVSMAMASGGVDSDSWDLFL 521
Query: 263 TAASGYVKAG 272
A G + G
Sbjct: 522 NKAVGNLDRG 531
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 134/332 (40%), Gaps = 43/332 (12%)
Query: 88 IIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPE 147
I+I +F R A + M+ K L + + K + ++ A + F +
Sbjct: 429 ILIDRFCKEGRLEEARNVLDEMSGKG-LALNAVGYNCLISALCKDEKVQDALNMFGDMSS 487
Query: 148 KLKLPSVYI--ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
K P ++ +L+ E+A + Q M G++ TI YN++++ + + G ++
Sbjct: 488 KGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQE 547
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYAT 263
L+++M +G D T++ L+ A A + I+K +A+ E +G+ +
Sbjct: 548 ALKLVNDMLFRGCPLDDITYNGLIKALCRAGN---IEKGLALFEDMMSKGLNPNNISCNI 604
Query: 264 AASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQN 323
+G + G AL LR M+H + +
Sbjct: 605 LINGLCRTGNIQHALEFLRD----MIHRGLT---------------------------PD 633
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
+ YN +I+ L K + A +F++ + +C D N LI +C+ G+ A
Sbjct: 634 IVTYNS----LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAH 689
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQSE 415
L+ + G PN TWY++ + +++ E
Sbjct: 690 LLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 124/305 (40%), Gaps = 50/305 (16%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTI-DYNSMMNVYYQTGNYKKLDSLMH 211
S++I ++ Y A +A ++ MR + T YN +++V K + ++ +
Sbjct: 147 SLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFY 206
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME--ADRGVVLDWTVYATAASGYV 269
EM KGI YTF +++ A ++ +D A+++ G V + VY T
Sbjct: 207 EMLSKGISPTVYTFGVVMKALCLVNE---VDSACALLKDMTRHGCVPNAIVYQTLIHALX 263
Query: 270 KAGLSDKALA--------------------------VLRKSEV------LMMHNKFSRAY 297
K G ++ L +LR E +++ ++
Sbjct: 264 KVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSF 323
Query: 298 DFVITQYAAC--GNKDDV-LRVWKRYKQNLKVYN---RGYICVISSLLKFDGMESAEKIF 351
+ + + C G D+ + + K N+ ++N GY+ S + D E+ +
Sbjct: 324 TYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYV----SRGRLD--EAKAVMH 377
Query: 352 EEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQN 411
E S DI N LI C++G L A L+ + Q++G EPNV T+ ++ + +
Sbjct: 378 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 437
Query: 412 NQSEK 416
+ E+
Sbjct: 438 GRLEE 442
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 107/275 (38%), Gaps = 40/275 (14%)
Query: 152 PSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSL 209
P+V Y L++ + E+A ++ +M +GL + YN +++ + + ++
Sbjct: 422 PNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNM 481
Query: 210 MHEMEEKGIDCDKYTF-SILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+M KG D +TF S++ C E + M+ GV+ + Y T +
Sbjct: 482 FGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLL--EGVIANTITYNTLIHAF 539
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
++ G +AL ++ + C DD+ YN
Sbjct: 540 LRRGAMQEALKLVND------------------MLFRGC-PLDDI------------TYN 568
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
+I +L + +E +FE+ S+ L + N LI+ CR G + A +
Sbjct: 569 G----LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRD 624
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
RG P++ T+ + G + ++++ + K
Sbjct: 625 MIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDK 659
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 130/294 (44%), Gaps = 20/294 (6%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
E+A + ++M+ G + YN++++VY ++ ++ ++ EME G T++ L
Sbjct: 308 EEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSL 367
Query: 229 LSACAAASDG---EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSE 285
+S A A DG E ++ M++ +G+ D Y T SG+ K G D A+ V +
Sbjct: 368 IS--AYARDGLLDEAMELKSQMVK--KGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMR 423
Query: 286 VLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGME 345
V ++ +I + GN ++++V++ K V + + ++ +GM+
Sbjct: 424 VAGCQPNIC-TFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMD 482
Query: 346 S-AEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLM 404
S +F+E + + N LI AY R G +A + + G P++ T+ +
Sbjct: 483 SEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAV 542
Query: 405 ATGYLQNN---QSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIE 455
+ QSEK + MK R KP++ + L Y +++E
Sbjct: 543 LAALARGGLWEQSEKVLAEMKDG--------RCKPNELTYCSLLHAYANGKEVE 588
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 160/364 (43%), Gaps = 31/364 (8%)
Query: 130 AKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
++V G+ + VPE+ + L++AY+ ++A I ++M D G+
Sbjct: 483 SEVSGVFKEMKRAGFVPER----DTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLST 538
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
YN+++ + G +++ + ++ EM++ ++ T+ LL A A +G+ ++++ A+ E
Sbjct: 539 YNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYA---NGKEVERMSALAE 595
Query: 250 ADRGVVLD--WTVYATAASGYVKAGL---SDKALAVLRK---SEVLMMHNKFSRAYDFVI 301
+++ + T Y K+ L +++A LR+ S + N Y
Sbjct: 596 EIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYG--- 652
Query: 302 TQYAACGNKDDVLRVWKR--YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNL 359
+ +++L K + +L YN ++ + + E +E I E ++ +
Sbjct: 653 -RRRMVSKTNEILNFIKDSGFTPSLTTYN----SLMYMYSRTEHFEKSEDILREIIAKGM 707
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
DI N +I AYCR G + +A + + + G P+V T+ Y ++ + ++
Sbjct: 708 KPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAID 767
Query: 420 AMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEI-ISADLQDRL 478
+K + KP++ + + ++ K + A+ FI L + ++ D + RL
Sbjct: 768 VVKYMI-----KNECKPNQNTYNSLIDWFCKLNRRDEANSFISNLRNLDPSVTKDEERRL 822
Query: 479 LNNI 482
L +
Sbjct: 823 LERL 826
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 111/276 (40%), Gaps = 39/276 (14%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
SV +++ A A ++ +R+ G+ Y S++ Y G Y++ + +
Sbjct: 186 SVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKK 245
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVK 270
+EE+G T++++L+ G KI ++++ GV D Y T S +
Sbjct: 246 LEEEGCRPTLITYNVILNVYGKM--GMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRR 303
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG 330
L ++A V + + AA + D V Y L VY +
Sbjct: 304 GSLYEEAAEVFEEMK-------------------AAGFSPDKVT-----YNALLDVYGK- 338
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
S + ME + +E E+ I N LI AY R GLL +A L +
Sbjct: 339 ------SRRPREAME----VLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMV 388
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV 426
+G +P+V T+ + +G+ + + + ++ ++ V
Sbjct: 389 KKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRV 424
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 117/264 (44%), Gaps = 21/264 (7%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
V L+N Y +S ++A + ++M +R +V + SM++ Q G++ K+ ++ EM
Sbjct: 158 VMSGLVNYYGAFRSVKEASKVFEEMYERDVVS----WTSMISACAQCGHWDKVLKMLSEM 213
Query: 214 EEKGIDCDKYTFSILLSACA---AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVK 270
+ +GI +K T LLSAC A +G + V G+ D + S Y K
Sbjct: 214 QAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKF----GIEADVDIRNALISMYTK 269
Query: 271 AGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNR 329
G AL + M +++++++ +I + + LR+++ +
Sbjct: 270 CGCLSDALEAFQA-----MPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGI 324
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
+ V+S+ + + + + +C D + N LI+ Y + G + AE +
Sbjct: 325 TLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTM 384
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQ 413
T+ +V +W +M GY++ +Q
Sbjct: 385 ----TKKDVVSWTVMVCGYVKGHQ 404
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 38/266 (14%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVK-KTIDYNSMMNVYYQTGNYKKLDSLMHEMEE 215
AL++A A +AE + + G +K +T YN+++ Y + + K + ++ EM +
Sbjct: 268 ALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQ 327
Query: 216 KGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
G+ D+ T+S+L+ A A E ++ MEAD GV V++ +G+ G
Sbjct: 328 CGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD-GVKPSSYVFSRILAGFRDRGDWQ 386
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVI 335
KA AVLR+ + A G + D Y +I
Sbjct: 387 KAFAVLREMQ--------------------ASGVRPD---------------RHFYNVMI 411
Query: 336 SSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTE 395
+ K++ + A F + + D+ N LIDA+C+ G +A L + +
Sbjct: 412 DTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCP 471
Query: 396 PNVRTWYLMATGYLQNNQSEKGVEAM 421
P T+ +M L + +GVEAM
Sbjct: 472 PGTTTYNIM-INLLGEQEHWEGVEAM 496
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 108/269 (40%), Gaps = 3/269 (1%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ALL Y S + AE ++ +M G+ Y+ +++ Y + G ++ L+ EME
Sbjct: 302 YNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEME 361
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
G+ Y FS +L+ D + ++ M+A GV D Y + K
Sbjct: 362 ADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQAS-GVRPDRHFYNVMIDTFGKYNCL 420
Query: 275 DKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-NLKVYNRGYIC 333
A+ K + ++ +I + G D +++ ++ N Y
Sbjct: 421 GHAMDAFNKMREEGIEPDVV-TWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNI 479
Query: 334 VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRG 393
+I+ L + + E E + E + + L +I L+D Y R G +A I + G
Sbjct: 480 MINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADG 539
Query: 394 TEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+P+ ++ + Y Q ++ + +K
Sbjct: 540 LKPSPTMYHALVNAYAQRGLADHALNVVK 568
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 143 NCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN 202
NC P + Y ++N + E E ++ +M+++GLV I Y ++++VY ++G
Sbjct: 469 NCPPGT----TTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGR 524
Query: 203 YKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEAD 251
YK+ + M+ G+ + L++A A + +V M+AD
Sbjct: 525 YKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKAD 573
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/169 (18%), Positives = 74/169 (43%), Gaps = 3/169 (1%)
Query: 257 DWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRV 316
D +++ S + +A L D AL +L ++ + + + S A +I+ G + +
Sbjct: 227 DAPLFSDLISAFARAALPDAALELLASAQAIGLTPR-SNAVTALISALGTAGRVAEAEAL 285
Query: 317 WKRY--KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYC 374
+ + +K R Y ++ ++ +++AE++ +E + D + L+DAY
Sbjct: 286 FLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYT 345
Query: 375 RRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
R G A L+ + + G +P+ + + G+ +K +++
Sbjct: 346 RAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLRE 394
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P++Y AL+NAYA A+ A +++ M+ GL + NS++N + + + S++
Sbjct: 544 PTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQ 603
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
M E G+ D T++ L+ A E DK+ + E
Sbjct: 604 FMRENGLRPDVITYTTLMKALIRV---EQFDKVPVIYE 638
>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
Length = 938
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 39/270 (14%)
Query: 158 LLNAYACAK---------SAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
L++ ++C+K + + A + + M + +V I Y+ ++++Y Q G+ K
Sbjct: 689 LVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHL 748
Query: 209 LMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
H+M ++G+ D ++IL++ C A E V M + G+ D Y G
Sbjct: 749 WFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQM--TNLGIKPDVIAYTVLLDG 806
Query: 268 YVKAGLSD--KALAVLRKSEVLMM-HNKF-SRAYDFVITQYAACGNKDDVLRVWKRYKQN 323
++K L + +A R+S +L HNK S D I C
Sbjct: 807 HLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPC---------------- 850
Query: 324 LKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
Y +I K + + A ++F+E + L D LI+ YC +G + KAE
Sbjct: 851 -------YTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAE 903
Query: 384 TLIYKAQLRGTEPNVRTWYLMATGYLQNNQ 413
L+ + +G EP+ T+ ++ L++ +
Sbjct: 904 DLLQEMIDKGIEPDELTFSVLNQSSLRSRK 933
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 114/251 (45%), Gaps = 6/251 (2%)
Query: 171 AEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL- 229
A +I+Q++ + + + YN +M+ + + + L+ +G + D Y +S L+
Sbjct: 396 AYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIR 455
Query: 230 SACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMM 289
S C + +D AM+ G+ + + + + K G++ +A+A K + +
Sbjct: 456 SYCKMGNLINAVDHYEAMVS--HGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGL 513
Query: 290 HNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNRGYICVISSLLKFDGMESAE 348
H Y+ + Y GN ++ +++ K L Y C+IS M++A+
Sbjct: 514 HLD-KVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQ 572
Query: 349 KIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
++FEE N+ DI N L +C+ GL+ + L+ + +G EPN T+ + G+
Sbjct: 573 QVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGF 632
Query: 409 LQ-NNQSEKGV 418
+ N SE V
Sbjct: 633 CRGGNLSEAEV 643
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 113/269 (42%), Gaps = 7/269 (2%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
+Y ++ Y + +A ++ +M+ GL I Y +++ Y G + + EM
Sbjct: 519 IYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEM 578
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ I+ D T++IL S C + E D + M AD+G+ + Y A G+ + G
Sbjct: 579 LKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRM--ADQGLEPNSLTYGIAIVGFCRGG 636
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYI 332
+A + E + + Y ++ Y G D ++ R + + + +
Sbjct: 637 NLSEAEVLFNVVEEKGI-DHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDH-FS 694
Query: 333 C--VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
C +I+ L + ++ A + + ++ D+ + LI YC+ G + KA +
Sbjct: 695 CSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMV 754
Query: 391 LRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
RG +V + ++ GY + + ++ +
Sbjct: 755 QRGLSVDVIVYTILMNGYCKAGRLQEACQ 783
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L++ A+ +A + +M +GL Y +++N Y G K + L+ EM
Sbjct: 851 YTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMI 910
Query: 215 EKGIDCDKYTFSIL 228
+KGI+ D+ TFS+L
Sbjct: 911 DKGIEPDELTFSVL 924
>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 107/225 (47%), Gaps = 5/225 (2%)
Query: 209 LMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGY 268
+ +M + G+ + + +++L+ AC+ + D E +K+++ ME ++GV D Y T S Y
Sbjct: 190 IFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEME-EKGVFPDIFTYNTLISVY 248
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYN 328
K + +AL+V + E + Y+ +I ++ G + R++++ K + +
Sbjct: 249 CKKSMHFEALSVQDRMERSGVAPDIV-TYNSLIHGFSREGRMREATRLFRKIKGVVMANH 307
Query: 329 RGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYK 388
Y +I + + ++ A ++ E ESR C + N ++ C G + +A L+ +
Sbjct: 308 VTYTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTE 367
Query: 389 AQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTR 433
++ EP+ T + Y + V+ KK ++E+G +
Sbjct: 368 MSVKKIEPDNITCNTLINAYCKIEDMVSAVKVKKK---MIESGLK 409
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 118/273 (43%), Gaps = 35/273 (12%)
Query: 161 AYACAKS--AEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGI 218
+AC+KS +EKAE ++ +M ++G+ YN++++VY + + + S+ ME G+
Sbjct: 210 VHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGV 269
Query: 219 DCDKYTFSILLSACAAASDGEGIDKIVAMMEADR------GVVL-DWTVYATAASGYVKA 271
D T++ L+ G + M EA R GVV+ + Y T GY +
Sbjct: 270 APDIVTYNSLI---------HGFSREGRMREATRLFRKIKGVVMANHVTYTTLIDGYCRM 320
Query: 272 GLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNK---DDVLRVWKRYKQNL---K 325
D+A LR EV+ SR + + Y + K D +R R + K
Sbjct: 321 NDIDEA---LRLREVME-----SRGFCPGVVTYNSILRKLCEDGRIREANRLLTEMSVKK 372
Query: 326 VYNRGYIC--VISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAE 383
+ C +I++ K + M SA K+ ++ L D+ LI +C+ L A+
Sbjct: 373 IEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELDNAK 432
Query: 384 TLIYKAQLRGTEPNVRTWYLMATG-YLQNNQSE 415
++ +G P + + G Y QN Q E
Sbjct: 433 EELFSMIEKGLSPGYSAYSWLVDGFYNQNKQDE 465
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 122/279 (43%), Gaps = 19/279 (6%)
Query: 151 LPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDS 208
+P++ + L+N + + +A +++ M + G+ + Y+S+MN Y +
Sbjct: 329 MPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARK 388
Query: 209 LMHEMEEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASG 267
L M KG D ++++IL++ C A GE M+ +G+ D Y T G
Sbjct: 389 LFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIH--QGLTPDIVSYNTLIDG 446
Query: 268 YVKAGLSDKALAVLRKSEVLMMHNKFSR--AYDFVITQYAACGNKDDVLRVWKR-----Y 320
+ G +A + + ++ + Y ++ + G R+++
Sbjct: 447 LCQLGRLREAHDLFKN---MLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYL 503
Query: 321 KQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLH 380
K N+ +YN +I ++ K ++ A K+F E + L +++I +I+ C+ GLL
Sbjct: 504 KPNMVMYN----ILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLD 559
Query: 381 KAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
+A + G PN ++ ++ G+LQ+ + V+
Sbjct: 560 EALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQ 598
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 137/308 (44%), Gaps = 21/308 (6%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGL 183
+D + K + + +A F+ + K P++ Y +L+ +A ++ +M +
Sbjct: 269 IDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNI 328
Query: 184 VKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDK 243
+ + ++ ++N++ + GN + ++ M E G++ + T+S L++ + ++ K
Sbjct: 329 MPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARK 388
Query: 244 IVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFV 300
+ +M +G D Y +GY KA +A + + M+H + +Y+ +
Sbjct: 389 LFDVM-ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNE----MIHQGLTPDIVSYNTL 443
Query: 301 ITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDG------MESAEKIFEEW 354
I G + ++K N N +C S LL DG + A ++F
Sbjct: 444 IDGLCQLGRLREAHDLFKNMLTN---GNLPDLCTYSILL--DGFCKQGYLAKAFRLFRAM 498
Query: 355 ESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQS 414
+S L ++ + N LIDA C+ L +A L + ++G +PNV+ + + G +
Sbjct: 499 QSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLL 558
Query: 415 EKGVEAMK 422
++ +EA +
Sbjct: 559 DEALEAFR 566
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 72/366 (19%), Positives = 149/366 (40%), Gaps = 18/366 (4%)
Query: 52 KLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTK 111
KL + M +D+++ L Q G D L ++I F +R + +
Sbjct: 126 KLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSV-LAKII 184
Query: 112 KSNFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAE 169
K LT ++ + KV QA F+ + + P V Y ++N
Sbjct: 185 KLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETV 244
Query: 170 KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILL 229
A + ++M + G + Y+++++ + + + M+ KGI + +T++ L+
Sbjct: 245 AAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLI 304
Query: 230 SA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK-SEVL 287
C + E + MM + ++ + ++ + + K G +A VL+ +E+
Sbjct: 305 QGLCNFSRWREASAMLNEMMSLN--IMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMG 362
Query: 288 MMHNKFSRAYDFVITQYAACGNKDDVLRVW-----KRYKQNLKVYNRGYICVISSLLKFD 342
+ N + Y ++ Y+ + +++ K K ++ YN +I+ K
Sbjct: 363 VEPNVVT--YSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYN----ILINGYCKAK 416
Query: 343 GMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWY 402
+ A+++F E + L DI N LID C+ G L +A L G P++ T+
Sbjct: 417 RIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYS 476
Query: 403 LMATGY 408
++ G+
Sbjct: 477 ILLDGF 482
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 132/326 (40%), Gaps = 53/326 (16%)
Query: 137 QAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMM 194
+A + FN + E+ P++ Y L+ A K + ++ ++ D G+ +I N+M+
Sbjct: 40 EAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMI 99
Query: 195 NVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR-- 252
N + ++G + + +M+E G T++ L+ A K++ MM D
Sbjct: 100 NAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENV 159
Query: 253 ---------------------------------GVVLDWTVYATAASGYVKAGLSDKALA 279
G+ D Y T A Y + G +++A
Sbjct: 160 KPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAER 219
Query: 280 VLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYN---RGY 331
++ K ++ R +I+ Y GN + LR R K+ N V+N +GY
Sbjct: 220 LILKMPYNIVKPN-ERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGY 278
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQL 391
+ + +G++ A + EE+ + D+ + +++A+ GL+ E +
Sbjct: 279 LDTTDT----NGVDEALTLMEEF---GIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVK 331
Query: 392 RGTEPNVRTWYLMATGYLQNNQSEKG 417
G EP++ + ++A GY++ Q K
Sbjct: 332 AGIEPDIHAYSILAKGYVRAGQPRKA 357
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 121/289 (41%), Gaps = 39/289 (13%)
Query: 157 ALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN-YKKLDSLMHEMEE 215
A++NA++ + ++A I Q+M++ G T YN+++ + G Y+ + L ++
Sbjct: 97 AMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQD 156
Query: 216 KGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSD 275
+ + + T++IL+ A E ++ M A G+ D Y T A Y + G ++
Sbjct: 157 ENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVAS-GIQPDVVTYNTMARAYAQNGETE 215
Query: 276 KALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYN-- 328
+A ++ K ++ R +I+ Y GN + LR R K+ N V+N
Sbjct: 216 RAERLILKMPYNIVKPN-ERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSL 274
Query: 329 -RGYI------------------CVISSLLKFDG----------MESAEKIFEEWESRNL 359
+GY+ + ++ F ME+ E+IF + +
Sbjct: 275 IKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGI 334
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
DI + L Y R G KAE L+ G +PNV + + +G+
Sbjct: 335 EPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGW 383
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 107/235 (45%), Gaps = 13/235 (5%)
Query: 158 LLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKG 217
+++ Y + +A + +M++ G+ + +NS++ Y T + +D + MEE G
Sbjct: 239 IISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFG 298
Query: 218 IDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 277
I D TFS +++A ++A E ++I M G+ D Y+ A GYV+AG KA
Sbjct: 299 IKPDVVTFSTIMNAWSSAGLMENCEEIFNDM-VKAGIEPDIHAYSILAKGYVRAGQPRKA 357
Query: 278 LAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ-----NLKVYNRGY 331
A+L S+ + N + +I+ + A G D R+ ++ + NLK Y
Sbjct: 358 EALLTSMSKYGVQPNVV--IFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYE--- 412
Query: 332 ICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
+I + AE++ E R + ++ + DA+ GL +A ++
Sbjct: 413 -TLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGLFKEANRIL 466
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 111/273 (40%), Gaps = 15/273 (5%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
Y L+ A+ K E+A ++ +M G+ + YN+M Y Q G ++ + L+ +M
Sbjct: 165 TYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKM 224
Query: 214 EEKGIDCDKYTFSILLSA-CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
+ ++ T I++S C + E + + M E GV + V+ + GY+
Sbjct: 225 PYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKEL--GVDPNPVVFNSLIKGYLDTT 282
Query: 273 LSDKALAVLRKSEVLMMHNKFSRAYDFV-----ITQYAACGNKDDVLRVWK-RYKQNLKV 326
++ E L + +F D V + +++ G ++ ++ K ++
Sbjct: 283 DTNGV------DEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEP 336
Query: 327 YNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 386
Y + ++ AE + + ++ I +I +C G + +A L
Sbjct: 337 DIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLC 396
Query: 387 YKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVE 419
K GT PN++T+ + GY + Q K E
Sbjct: 397 EKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEE 429
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P V+ +L+ Y + + M + G+ + ++++MN + G + + + +
Sbjct: 268 PVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFN 327
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
+M + GI+ D + +SIL A + ++ M + GV + ++ T SG+ A
Sbjct: 328 DMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSM-SKYGVQPNVVIFTTIISGWCAA 386
Query: 272 GLSDKALAVLRK 283
G D+A + K
Sbjct: 387 GKMDRAFRLCEK 398
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 110/271 (40%), Gaps = 44/271 (16%)
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
+MN G + ++ + + E+G T++ L++A + I +++ + AD
Sbjct: 28 LMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKV-ADN 86
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD 312
G+ D + + + ++G D+A+ + +K + S Y+ +I + G +
Sbjct: 87 GMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTS-TYNTLIKGFGIAGRPYE 145
Query: 313 VLRVWKRYKQ--NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+++ + Q N+K +R Y N LI
Sbjct: 146 SMKLLEMMGQDENVKPNDRTY-----------------------------------NILI 170
Query: 371 DAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA 430
A+C + L +A +++K G +P+V T+ MA Y QN ++E+ + L+L
Sbjct: 171 QAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERA-----ERLILKMP 225
Query: 431 GTRWKPSKECLAACLGYYKKERDIEGADYFI 461
KP++ + Y KE ++ A F+
Sbjct: 226 YNIVKPNERTCGIIISGYCKEGNMPEALRFL 256
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 122/279 (43%), Gaps = 27/279 (9%)
Query: 152 PSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMH 211
P Y +++ A +++ M G+V + ++M+ + + G+ +
Sbjct: 320 PVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFD 379
Query: 212 EMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKA 271
EM+++G+ D T++ L++ A + + ++++ ME D+G+ +D Y GY K
Sbjct: 380 EMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME-DKGLDVDAVTYTVLIDGYCKV 438
Query: 272 GLSDKALAVLRKSEVLMMHNKF--SRAYDFVITQYA----ACGNKD-----DVLR--VWK 318
G + +E ++HNK R V+T A C D ++L K
Sbjct: 439 G---------KMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489
Query: 319 RYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
+ N+ YN +I+ L K +E A + + + L D+ +I A C+
Sbjct: 490 GLELNIFTYNS----LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKG 417
L +A +L+ + +G +P + T+ ++ G+ + + E G
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 584
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 124/296 (41%), Gaps = 17/296 (5%)
Query: 126 LDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVK 185
LD +Q I F C P Y LLNA+ ++AE + +
Sbjct: 100 LDTFQNMQDI------FGCKPG----VRSYNTLLNAFVELNEWDRAESFSRYFESMDVSP 149
Query: 186 KTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIV 245
YN ++ + + +K SL+ M + + D +++ L++ D G K+
Sbjct: 150 NLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVF 209
Query: 246 AMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK--SEVLMMHNKFSRAYDFVITQ 303
M RGVV D T Y G+ K G DK + + + + N + Y+ +I
Sbjct: 210 DEMSV-RGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVT--YNIMING 266
Query: 304 YAACGNKDDVLRVWKRYKQNLKVYNR-GYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
CG D+ L +W+R +N + + Y +I L + ++ A ++++E +L D
Sbjct: 267 LCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVD 326
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGV 418
N +++ +CR G + ++ L + + V ++ ++ G +N + E+ +
Sbjct: 327 AVTHNAMLNGFCRAGKIKESFEL-WMVMGKENCQTVVSYNILIKGLFENGKVEEAI 381
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 141/341 (41%), Gaps = 46/341 (13%)
Query: 124 IRLDLIAKVQGIEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDR 181
I + + K Q IE+A S + + + P V Y L+N A + +M R
Sbjct: 156 ILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVR 215
Query: 182 GLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKY----TFSILLSA-CAAAS 236
G+V YN +++ +++ G+Y K + + + DC Y T++I+++ C
Sbjct: 216 GVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVK---DCSVYPNVVTYNIMINGLCKCGR 272
Query: 237 DGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRK---SEVLM----- 288
E ++ M + +R D Y++ G +AG D A+ V ++ S +++
Sbjct: 273 FDESLEIWERMTKNEREK--DMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTH 330
Query: 289 --MHNKFSRA-----------------------YDFVITQYAACGNKDDVLRVWKRY-KQ 322
M N F RA Y+ +I G ++ + +W+ K+
Sbjct: 331 NAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKK 390
Query: 323 NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKA 382
+ + Y +I L K + A KIF+E E D + ++D C+ G + +A
Sbjct: 391 GCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEA 450
Query: 383 ETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKK 423
+++ + RG + + + G+++ ++ E + ++
Sbjct: 451 ISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFRE 491
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 116/257 (45%), Gaps = 27/257 (10%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+++ M G+V + ++M+ + + G+ + EM+++G+ D T++ L++
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLC 401
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF 293
A + + ++++ ME D+G+ +D Y GY K G + +E ++HNK
Sbjct: 402 RAGELKEAERVLQEME-DKGLDVDAVTYTVLIDGYCKVG---------KMTEAFLVHNKM 451
Query: 294 --SRAYDFVITQYA----ACGNKD-----DVLR--VWKRYKQNLKVYNRGYICVISSLLK 340
R V+T A C D ++L K + N+ YN +I+ L K
Sbjct: 452 VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS----LINGLCK 507
Query: 341 FDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRT 400
+E A + + + L D+ +I A C+ L +A +L+ + +G +P + T
Sbjct: 508 AGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVT 567
Query: 401 WYLMATGYLQNNQSEKG 417
+ ++ G+ + + E G
Sbjct: 568 YNVLMNGFCMSGRVEGG 584
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 162 YACAKSA--EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGN--YKKLDSLMHEMEEKG 217
YA K ++A ++Q+M+ +G YN+M +Y+ N ++ + + + E+G
Sbjct: 426 YALCKDGKLDQATRLVQEMKSQGCKPDICTYNTM--IYHLCNNDLMEEAEHIFRNLIEEG 483
Query: 218 IDCDKYTFSILLSACAAASDG---EGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ + T++ L+ A +G EG+ M+ G LD Y K G
Sbjct: 484 VVANGITYNTLIHA--LLRNGRWQEGLRLASEMLL--HGCQLDVISYNGLIKALCKEGNV 539
Query: 275 DKALAVLRKSEVL-MMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYI 332
D+++A+L + + N FS Y+ +I + G D L + K Q L Y
Sbjct: 540 DRSMALLEEMVTKGIKPNNFS--YNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYN 597
Query: 333 CVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLR 392
+I+ L K +A + E+ + N+ DI N LI +C+ LL A L+ KA
Sbjct: 598 TLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISG 657
Query: 393 GTEPNVRTWYLMATGYLQNNQSEKG 417
G PN RTW +M +++ + +G
Sbjct: 658 GIVPNERTWGMMVQNFVRQTVNLEG 682
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 137/326 (42%), Gaps = 14/326 (4%)
Query: 86 LRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADV---AIRLDLIAKVQGIEQAASYF 142
L +I+ + + A ++ M K P DV +I + + K+ A
Sbjct: 316 LNTVIRGCLTEGKLARATELYEMMGSKG----CPPDVHTYSILMHGLCKLGRFGSAVRML 371
Query: 143 NCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQT 200
+ + EK P++ Y LL+++ + A ++ QM +G + YN ++ +
Sbjct: 372 DEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKD 431
Query: 201 GNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTV 260
G + L+ EM+ +G D T++ ++ E + I + + GVV +
Sbjct: 432 GKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNL-IEEGVVANGIT 490
Query: 261 YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVITQYAACGNKDDVLRVWKR 319
Y T ++ G + L + SE+L+ + +Y+ +I GN D + + +
Sbjct: 491 YNTLIHALLRNGRWQEGLRL--ASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEE 548
Query: 320 -YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGL 378
+ +K N Y +I+ L K + A ++ +E ++ L DI N LI+ C+ G
Sbjct: 549 MVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGW 608
Query: 379 LHKAETLIYKAQLRGTEPNVRTWYLM 404
H A L+ K P++ T+ ++
Sbjct: 609 THAALNLLEKLPNENVHPDIVTYNIL 634
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 99/262 (37%), Gaps = 52/262 (19%)
Query: 150 KLPSVYIALLNAY--ACAKSAE--KAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
+LP V + +LN C + +A + + M +G Y+ +M+ + G +
Sbjct: 307 RLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGS 366
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAA 265
++ EMEEKG + T+S LL +
Sbjct: 367 AVRMLDEMEEKGCAPNIVTYSTLLHS---------------------------------- 392
Query: 266 SGYVKAGLSDKALAVLRKSEVLMMHNKF---SRAYDFVITQYAAC--GNKDDVLRVWKRY 320
+ + G+ D A A+L + M+ F S+ Y+ +I YA C G D R+ +
Sbjct: 393 --FCRNGMWDDARAMLDQ----MLAKGFSMNSQGYNGII--YALCKDGKLDQATRLVQEM 444
Query: 321 K-QNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLL 379
K Q K Y +I L D ME AE IF + + N LI A R G
Sbjct: 445 KSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRW 504
Query: 380 HKAETLIYKAQLRGTEPNVRTW 401
+ L + L G + +V ++
Sbjct: 505 QEGLRLASEMLLHGCQLDVISY 526
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 21/276 (7%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
SV +L+ ++ ++AE++ +M + LV + +M++ Y + G +K
Sbjct: 332 SVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVS----WTAMISGYEKNGLPEKAVETYTI 387
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEG-IDKIVAMME-ADRGVVLDWTVYATA-ASGYV 269
ME +G+ D+ T + +LSACA G G +DK + + E ADR + + + A + Y
Sbjct: 388 MEHEGVVPDEITIASVLSACA----GLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYS 443
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
K DKAL V + + NK ++ +I + L +++ +LK +
Sbjct: 444 KCRCIDKALEVFHR-----IPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKPNSV 498
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
+ V+S+ + + ++I L D +PN L+D Y R G + A
Sbjct: 499 TLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWN----- 553
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
Q E +V +W ++ TGY Q + VE K +
Sbjct: 554 QFNSCEKDVASWNILLTGYAQQGKGGLAVELFHKMI 589
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 21/276 (7%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
SV +L+ ++ ++AE++ +M + LV + +M++ Y + G +K
Sbjct: 332 SVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVS----WTAMISGYEKNGLPEKAVETYTI 387
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEG-IDKIVAMME-ADRGVVLDWTVYATA-ASGYV 269
ME +G+ D+ T + +LSACA G G +DK + + E ADR + + + A + Y
Sbjct: 388 MEHEGVVPDEITIASVLSACA----GLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYS 443
Query: 270 KAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR 329
K DKAL V + + NK ++ +I + L +++ +LK +
Sbjct: 444 KCRCIDKALEVFHR-----IPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKPNSV 498
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKA 389
+ V+S+ + + ++I L D +PN L+D Y R G + A
Sbjct: 499 TLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWN----- 553
Query: 390 QLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKAL 425
Q E +V +W ++ TGY Q + VE K +
Sbjct: 554 QFNSCEKDVASWNILLTGYAQQGKGGLAVELFHKMI 589
>gi|168024876|ref|XP_001764961.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683770|gb|EDQ70177.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 133/300 (44%), Gaps = 18/300 (6%)
Query: 133 QG-IEQAASYFNCVPEK-LKLPSV-YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTID 189
QG IE+A + V E + L V Y +++ AY A +KA ++++MR+ LV +I
Sbjct: 164 QGKIEEAERIMDTVEESGMSLGLVGYNSMITAYGKACLYDKAARLVEKMREEDLVPDSIT 223
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMME 249
Y+ M+ + G K+ S EM+ I F+ L+S A D EGI +++ M+
Sbjct: 224 YSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSNFNTLISLYGKAKDVEGIVRVITEMK 283
Query: 250 ADRGVVLDWTVYATAASGYVKAGL---SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAA 306
G DW A Y +AGL + L +LR + + + + +Y ++ Y
Sbjct: 284 -KYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAGWV----EETGSYGTLLHVYLK 338
Query: 307 CGNKDDVLRVW---KRYKQNLKVYN-RGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
C + LR++ ++ K Y R IC FDG A+ +F+E + +
Sbjct: 339 CNLPKEALRIFLAMRKAGMAPKEYMCRSLICTFRDAEMFDG---AKSVFKEMQVAGVTPS 395
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
+ +I Y G + +AE L + + ++ + +M Y++ + E ++ K
Sbjct: 396 LESSCTMIYVYGMNGDVKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYK 455
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ++L+AY A EK ++ +M + G+ YN ++N Y + ++++L M+
Sbjct: 608 YNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRTMQ 667
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA--DRGVVLDWTVYATAASGYVKAG 272
E+G+ D++T++ ++ A + D+ V +A D G+ D Y S + +AG
Sbjct: 668 EEGVVPDRWTYNTIIRTYGFA---DYPDRAVYWFKAMQDAGISPDRVTYMILVSTFERAG 724
Query: 273 LSDKA 277
D+A
Sbjct: 725 NIDEA 729
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 14/174 (8%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
+ L++AYA + E + +M++ G YNS+++ Y + G +K+ ++ ME
Sbjct: 573 FSTLVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARME 632
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEA------DRGVVLDWTVYATAASGY 268
G+ D +++IL++ G + ++A ME + GVV D Y T Y
Sbjct: 633 NSGMRMDLASYNILINT-------YGKNYMIAEMETLFRTMQEEGVVPDRWTYNTIIRTY 685
Query: 269 VKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYKQ 322
A D+A+ + + + Y +++ + GN D+ R R Q
Sbjct: 686 GFADYPDRAVYWFKAMQDAGISPD-RVTYMILVSTFERAGNIDEAARWCLRMSQ 738
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 152/326 (46%), Gaps = 23/326 (7%)
Query: 119 PADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQM 178
P +A + ++A+ + +A++ + P Y AL++A++ A A + ++M
Sbjct: 141 PRVLATAIRVMARAGRLAEASALLDAAPGPDA--GAYTALVSAFSRAGRFRDAVAVFRRM 198
Query: 179 RDRGLVKKTIDYNSMMNVYYQTG-NYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASD 237
D G+ + YN +++VY + +K++ L+ M+E G+ D+YT++ L+S C +
Sbjct: 199 VDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRAL 258
Query: 238 GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY 297
+ ++ M+A G D + + Y KA D+A+ V+++ E + Y
Sbjct: 259 YKEAAQVFDEMKAS-GFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVV-TY 316
Query: 298 DFVITQYAACGNKDDVLRVWKRYKQNLKVYNRG-------YICVISSLLKFDGMESAEKI 350
+ +I+ Y KD +L KQ ++V +G Y +IS L + +++A
Sbjct: 317 NSLISSYV----KDGLLEQAVALKQEMEV--KGIKPDVVTYTTLISGLDRAGKIDAAIVE 370
Query: 351 FEEWESRNLCH-DIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
++E RN C ++ N LI + RG + + + + G P++ TW + +
Sbjct: 371 YDEM-VRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFG 429
Query: 410 QN--NQSEKGV-EAMKKALVLLEAGT 432
QN + GV + MKKA + E T
Sbjct: 430 QNGLDSEVSGVFKEMKKAGYIPERDT 455
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 137/300 (45%), Gaps = 15/300 (5%)
Query: 128 LIAKVQGIEQAASYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKT 187
L ++V G+ + +PE+ Y++L+++Y+ + A I ++M + G+
Sbjct: 433 LDSEVSGVFKEMKKAGYIPER----DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDV 488
Query: 188 IDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAM 247
YN++++ + G +++ + L EMEE+ D+Y++S LL A A A + +DK+ A+
Sbjct: 489 STYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANA---KRLDKMKAL 545
Query: 248 ME---ADRGVVLDWTV--YATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVIT 302
+ ++R +W V S ++KA LR+ + N + A +
Sbjct: 546 SDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLN-AMVSIYG 604
Query: 303 QYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHD 362
+ + +L + K NL Y ++ + E E I E +S + D
Sbjct: 605 KNRMVRKVEKILSLMKESAINLSAAT--YNSLMHMYSRLGDCEKCENILTEIKSSGVRPD 662
Query: 363 IRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
N +I AY R+G + +A L + + G +P+V T+ + Y+ N+ E+ +E ++
Sbjct: 663 RYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVR 722
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 124/305 (40%), Gaps = 29/305 (9%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
++ M++ G+ YN++++ + YK+ + EM+ G + DK TF+ LL
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289
Query: 234 AASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKF 293
A + +++ ME G Y + S YVK GL ++A+A+ ++ EV +
Sbjct: 290 KARRHDEAIEVIQEME-RVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDV 348
Query: 294 SRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEK---- 349
Y +I+ G D + Y + ++ + +C ++L+K G+
Sbjct: 349 V-TYTTLISGLDRAGKIDAAI---VEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMA 404
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY- 408
+F+E S DI N L+ + + GL + + + + G P T+ + + Y
Sbjct: 405 VFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYS 464
Query: 409 ----------LQNNQSEKG----VEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDI 454
+ E G V L L G RW+ +++ A +ERD
Sbjct: 465 RCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEM-----EERDC 519
Query: 455 EGADY 459
+ +Y
Sbjct: 520 KPDEY 524
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 122/286 (42%), Gaps = 42/286 (14%)
Query: 169 EKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSIL 228
++A + +M+ G + +NS+++VY + + + ++ EME G T++ L
Sbjct: 260 KEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSL 319
Query: 229 LSACAAASDGEGIDKIVAM---MEADRGVVLDWTVYATAASGYVKAGLSDKALA----VL 281
+S + DG +++ VA+ ME +G+ D Y T SG +AG D A+ ++
Sbjct: 320 IS--SYVKDGL-LEQAVALKQEMEV-KGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMV 375
Query: 282 RK---------SEVLMMH---NKFS---------RAYDFV---------ITQYAACGNKD 311
R + ++ MH KF R+ FV + + G
Sbjct: 376 RNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDS 435
Query: 312 DVLRVWKRYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLI 370
+V V+K K+ + R Y+ +ISS + + A +I++ + D+ N ++
Sbjct: 436 EVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVL 495
Query: 371 DAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
A R G +AE L + + R +P+ ++ + Y + +K
Sbjct: 496 SALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDK 541
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
+ Y +L++ Y+ EK E I+ +++ G+ YN+++ Y + G K+ L E
Sbjct: 629 ATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSE 688
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M+ G+ D T++I + + + S E ++V M +G + Y + GY + G
Sbjct: 689 MKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYM-VTQGCKPNERTYNSIVEGYCRNG 747
Query: 273 -LSDKALAVLRKSEVLMMHNKFSR 295
L+D + V S + +H +S+
Sbjct: 748 KLTDAKIFV---SNLPQLHPGYSK 768
>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 752
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 112/252 (44%), Gaps = 17/252 (6%)
Query: 174 IMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACA 233
+ Q++ DR + TI + S++ Y + +++ S+ +M + G + +++T +++L AC+
Sbjct: 120 LAQKVFDRMRTRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACS 179
Query: 234 AASD---GEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH 290
+ D GE I V D V + ++ A Y K+G D A V M
Sbjct: 180 SPDDRILGEQIHCFVIKSGFDENVFVGTSLIAM----YTKSGFFDVAEKVFDS-----MG 230
Query: 291 NKFSRAYDFVITQYAACGNKDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEK 349
K R +F+I +Y GN + V+K + + + +IS+ G+E ++
Sbjct: 231 FKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQ 290
Query: 350 IFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYL 409
+ + + N +I Y G+ +AE + +E N+ +W + +GY
Sbjct: 291 LQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSM----SEKNLISWTALISGYS 346
Query: 410 QNNQSEKGVEAM 421
++ +K V+A
Sbjct: 347 RSGYGKKAVDAF 358
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
SV ++++ YA S E A + M R +I +N++++ Y G +K L E
Sbjct: 509 SVANSVISMYAKCGSIEDAHQMFNIMNCR----DSISWNALISAYALHGQAQKSLFLFEE 564
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M+ KG D D++T +L AC + + + +ME G+ YA A +AG
Sbjct: 565 MKRKGFDPDEFTILAILQACTYSGLWKDGICLFNLMEPKYGIKPLLEHYACMADLLGRAG 624
Query: 273 LSDKALAVLRKS 284
+A+ ++++S
Sbjct: 625 YLSEAMDIIKRS 636
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 9/257 (3%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y L+ Y + +A ++ ++R RGLV + YN++++ + G+ L EM
Sbjct: 333 YNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMI 392
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLS 274
+ G D D +TF+IL+ + ++ M +RG+ D Y T G +K G
Sbjct: 393 KHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEM-LNRGLQPDRFAYITRIVGELKLGDP 451
Query: 275 DKALAVLRKSEVLMMHNKFSR---AYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNR-G 330
KA + + M+ F Y+ I GN + + K+ N V +
Sbjct: 452 SKAFGMQEE----MLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVT 507
Query: 331 YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQ 390
Y +I + L + A +F E S+ + + LI +Y RG L A ++
Sbjct: 508 YTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMH 567
Query: 391 LRGTEPNVRTWYLMATG 407
+G PNV T+ + G
Sbjct: 568 EKGVHPNVITYNALING 584
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 105/276 (38%), Gaps = 38/276 (13%)
Query: 135 IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNS 192
I+ A +N + E P+V Y +L+++ ++A ++ QM+ G + + YN
Sbjct: 171 IDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNV 230
Query: 193 MMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADR 252
++N +G ++ L+ EM G++ YT+ L+ + ++ M R
Sbjct: 231 LVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEM-LSR 289
Query: 253 GVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDD 312
G V Y T G K G A +L D
Sbjct: 290 GAVPTLVTYNTIMYGLCKWGRVSDARKLL------------------------------D 319
Query: 313 VLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDA 372
V+ V K +L YN +I + + A +F E R L + N LID
Sbjct: 320 VM-VNKNLMPDLVSYN----TLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDG 374
Query: 373 YCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY 408
CR G L A L + G +P+V T+ ++ G+
Sbjct: 375 LCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGF 410
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 8/175 (4%)
Query: 60 MGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTP 119
+GDP+ + + ++ + G P D+ + I A ++ M L P
Sbjct: 448 LGDPSKAF-GMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNG---LVP 503
Query: 120 ADVAIRLDLIAKVQG--IEQAASYFNCVPEKLKLPSV--YIALLNAYACAKSAEKAEIIM 175
V + A + + +A + F + K PSV Y L+++YA + A +
Sbjct: 504 DHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHF 563
Query: 176 QQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLS 230
+M ++G+ I YN+++N + + EM+ KGI +KYT++IL++
Sbjct: 564 FEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILIN 618
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 130/294 (44%), Gaps = 17/294 (5%)
Query: 136 EQAASYFNCVPEKLKLPS--VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSM 193
E+A F + EK +P Y +LL A+A + +K E +++ G K I YN+M
Sbjct: 345 EEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTM 404
Query: 194 MNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRG 253
+++Y + G L EM G D T+++++ + K++ M AD G
Sbjct: 405 IHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDM-ADAG 463
Query: 254 VVLDWTVYATAASGYVKAGL---SDKALAVLRKSEVLMMHNKFSR-AYDFVITQYAACGN 309
+ ++ Y K G ++K + S V K R AY ++ +A G
Sbjct: 464 LKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGV-----KPDRLAYLVMLDVFARSGE 518
Query: 310 KDDVLRVWKR-YKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNH 368
+ +LR+++ N + + Y ++ +L K D E E+I ++ E I
Sbjct: 519 TEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDMELLCQMSLGVISTI 578
Query: 369 LIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMK 422
LI A C + + L+ KA L+G +P+ ++ + + Y+ + E+G+ ++
Sbjct: 579 LIKARC----VSQGGKLLKKACLQGYKPDAKSLWSIMNAYVMTEKHEEGLSLLE 628
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 144/357 (40%), Gaps = 50/357 (14%)
Query: 102 ALQISMWMTKKSNFVLTPAD--VAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYIALL 159
AL W+ + + PA VA+ L ++ + + A F + V+ A++
Sbjct: 173 ALDAFEWLARST----APASRAVAVVLGVLGRARQDSIAEEVFLRFAGEGATVQVFNAMM 228
Query: 160 NAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYK---KLDSLMHEMEEK 216
YA + + A ++ M DRG+ + +N+++N ++G LD L+ E+ +
Sbjct: 229 GVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALD-LLFEVRQS 287
Query: 217 GIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDK 276
G+ D T++ L+SAC+ +S+ E + M A WT Y S + + G +++
Sbjct: 288 GLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWT-YNAMVSVHGRCGKAEE 346
Query: 277 ALAVLRK-SEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKR-----YKQNLKVYNR- 329
A + + E M + + Y+ ++ +A GN D V + +K+N YN
Sbjct: 347 AERLFGELVEKGFMPDAVT--YNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTM 404
Query: 330 ------------------------------GYICVISSLLKFDGMESAEKIFEEWESRNL 359
Y +I SL K D + A K+ E+ L
Sbjct: 405 IHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGL 464
Query: 360 CHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ + LI AY + G AE G +P+ + +M + ++ ++EK
Sbjct: 465 KPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEK 521
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y +LL A A A+ E+A+ + ++MR + Y+ MM +Y GN+ K ++L+ M+
Sbjct: 993 YKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMK 1052
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
E GI+ T IL+++ A + ++ +++ + + Y+T Y+K G
Sbjct: 1053 EDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSS-SLEVSTLPYSTVFDAYLKNG 1109
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 127/310 (40%), Gaps = 41/310 (13%)
Query: 154 VYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEM 213
++ AL++AYA + EKA + M G + N MM G +L ++ E+
Sbjct: 782 IWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGEL 841
Query: 214 EEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
++ K T ++L A A A D + KI M+A G + + +Y + S
Sbjct: 842 QDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKA-AGYLPNMHLYRSMTSLLCHHNR 900
Query: 274 SDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWK--------------- 318
++ + E S ++ ++ Y A GN D +V++
Sbjct: 901 FRDVELMIAEMEGAGFKPDLS-IFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYN 959
Query: 319 ----------RYKQNLKVYN----RG-------YICVISSLLKFDGMESAEKIFEEWESR 357
R ++ + N RG Y ++++ K + E A+++FEE S+
Sbjct: 960 TLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSK 1019
Query: 358 NLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGY---LQNNQS 414
+ + I + ++ Y G KAE L+ + G EP + T +++ T Y Q +++
Sbjct: 1020 SYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEA 1079
Query: 415 EKGVEAMKKA 424
E + ++K +
Sbjct: 1080 ENVLNSLKSS 1089
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 118/274 (43%), Gaps = 30/274 (10%)
Query: 190 YNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA-----CAAASDGEGIDKI 244
+N+MM VY ++G + L+ M ++GID D +F+ L++A C AA G +D +
Sbjct: 224 FNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAA--GVALDLL 281
Query: 245 VAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR---AYDFVI 301
+ ++ G+ D Y T S ++ + A+ V + M+ ++ Y+ ++
Sbjct: 282 FEVRQS--GLRPDVITYNTLISACSQSSNLEDAVTVFEE----MIASECRPDLWTYNAMV 335
Query: 302 TQYAACGNKDDVLRVW-----KRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWES 356
+ + CG ++ R++ K + + YN ++ + K ++ E EE
Sbjct: 336 SVHGRCGKAEEAERLFGELVEKGFMPDAVTYN----SLLYAFAKEGNVDKVEHTCEELVK 391
Query: 357 RNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEK 416
+ N +I Y + G L A L + + G P+ T+ +M + +K
Sbjct: 392 AGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSL---GKMDK 448
Query: 417 GVEAMKKALVLLEAGTRWKPSKECLAACLGYYKK 450
EA K + +AG KP+ +A + Y K
Sbjct: 449 IAEAGKVLEDMADAG--LKPTLVAFSALICAYAK 480
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 17/196 (8%)
Query: 153 SVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHE 212
S++ +LLN Y A + ++ + Q + + GL YN+++ +Y ++ ++ +L++E
Sbjct: 921 SIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNE 980
Query: 213 MEEKGIDCDKYTFSILLSACAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAG 272
M ++G+ ++ LL+A A A E D++ M + + L+ ++Y Y AG
Sbjct: 981 MGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRS-KSYQLNRSIYHMMMKIYRNAG 1039
Query: 273 LSDKA---LAVLR----KSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNL 324
KA LAV++ + + MH ++T Y G + V K +L
Sbjct: 1040 NHSKAENLLAVMKEDGIEPTIATMH--------ILMTSYGTAGQPHEAENVLNSLKSSSL 1091
Query: 325 KVYNRGYICVISSLLK 340
+V Y V + LK
Sbjct: 1092 EVSTLPYSTVFDAYLK 1107
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 57/311 (18%), Positives = 128/311 (41%), Gaps = 40/311 (12%)
Query: 114 NFVLTPADVAIRLDLIAKVQGIEQAASYFNCVPEKLKLPSVYI--ALLNAYACAKSAEKA 171
+F ++ + V + LD AK + + +N + LP++++ ++ +
Sbjct: 845 DFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDV 904
Query: 172 EIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSA 231
E+++ +M G +NS++N+Y GN+ + + + E G++ D+ T++ L+
Sbjct: 905 ELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVM 964
Query: 232 -CAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMH 290
C + EG + M RG+ Y K+ L+ A A LR+ +
Sbjct: 965 YCRSLRPEEGFTLLNEM--GKRGLTPKLQSY--------KSLLAASAKAELREQADQLFE 1014
Query: 291 NKFSRAYDFVITQYAACGNKDDVLRVWKRYKQNLKVYNRGYICVISSLLKFDGMESAEKI 350
S++Y + Y ++++++ + K N + +++K DG+E
Sbjct: 1015 EMRSKSYQLNRSIYHM------MMKIYRNAGNHSKAEN------LLAVMKEDGIEPT--- 1059
Query: 351 FEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQ 410
I + L+ +Y G H+AE ++ + E + + + YL+
Sbjct: 1060 ------------IATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVFDAYLK 1107
Query: 411 NNQSEKGVEAM 421
N + G++ +
Sbjct: 1108 NGDYDLGIKKL 1118
>gi|356528730|ref|XP_003532952.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Glycine max]
Length = 963
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 138/319 (43%), Gaps = 34/319 (10%)
Query: 146 PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKK 205
P+K +L + Y L++ Y A +A + +M G+ +N+M+ V G+ +
Sbjct: 265 PQKPRLSNTYNVLIDLYGKAGRLSEAAEVFAEMLKAGVAVDVWTFNTMIFVCGSQGDLAE 324
Query: 206 LDSLMHEMEEKGIDCDKYTFSILLSACAAASD-GEGIDKIVAMMEADRGVVLDWTVYATA 264
++L+ MEEKG+ D TF+I LS A A D G + + EA G+ D Y
Sbjct: 325 AEALLGMMEEKGVAPDTKTFNIFLSLYAEARDIGAAVLCYKRIREA--GLCPDEVTYRAL 382
Query: 265 ASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAY--------DFVITQYAACGNKDDVLRV 316
+ + +R+ E L+ ++ RA+ ++ Y G+ D +
Sbjct: 383 LGVLCRKNM-------VREVEDLI--DEMERAFVSVDEHCVPGIVEMYVGEGDVDKAFDL 433
Query: 317 WKRYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLC---HDIRIPNHLIDAY 373
K+++ N ++ + ++ + E AE +F + RNL D+ N +I AY
Sbjct: 434 LKKFQVNGEMSSNIRSAIMDVFAEKGLWEEAEDVF--YRGRNLAGRKRDVLECNVMIKAY 491
Query: 374 CRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTR 433
+ L KA +L + GT PN T+ + Q G + + +A+ L++
Sbjct: 492 GKAKLYDKAISLFKGMKNHGTWPNESTYNSLV-------QMLSGADLVDQAMDLVDEMQE 544
Query: 434 --WKPSKECLAACLGYYKK 450
+KP + +A +G Y +
Sbjct: 545 VGFKPPCQTFSAVIGCYAR 563
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 101/229 (44%), Gaps = 15/229 (6%)
Query: 155 YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEME 214
Y ++ Y ++A I ++M+ GL++ + YN ++ Y G + + L+HEM
Sbjct: 693 YATIMYLYKGVGLIDEAIEIAEEMKLSGLLRDCVSYNKVLVCYAANGQFYECGELIHEMI 752
Query: 215 EKGIDCDKYTFSILLSACAAASDGEGID-KIVAMMEADRGVVLDWTVYATAASGYVKAGL 273
+ + + TF +L + GI + VA +E+ + T + Y G+
Sbjct: 753 SQKLLPNDGTFKVLFTILKKG----GIPTEAVAQLESSYQEGKPYARQTTFTALYSLVGM 808
Query: 274 SDKAL---AVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKRYK-QNLKVYNR 329
+ AL +SEV + S A++ I Y + G+ + L ++ + + ++L
Sbjct: 809 HNLALESAQTFIESEV----DLDSSAFNVAIYAYGSAGDINKALNIYMKMRDEHLGPDLV 864
Query: 330 GYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAY--CRR 376
YI ++ K +E ++I+ + E + + + +IDAY C R
Sbjct: 865 TYIYLVGCYGKAGMVEGVKQIYSQLEYGEIESNESLFKAIIDAYKICNR 913
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,184,509,013
Number of Sequences: 23463169
Number of extensions: 289651147
Number of successful extensions: 859546
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3264
Number of HSP's successfully gapped in prelim test: 4312
Number of HSP's that attempted gapping in prelim test: 802966
Number of HSP's gapped (non-prelim): 36583
length of query: 485
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 338
effective length of database: 8,910,109,524
effective search space: 3011617019112
effective search space used: 3011617019112
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)