Query 011474
Match_columns 485
No_of_seqs 116 out of 218
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 08:53:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011474.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011474hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3r9m_A BRO1 domain-containing 83.6 3.7 0.00013 41.7 9.2 57 417-473 237-293 (376)
2 3c3r_A Programmed cell death 6 82.4 4.8 0.00016 40.9 9.5 72 388-469 240-311 (380)
3 3rau_A Tyrosine-protein phosph 81.3 8.5 0.00029 38.8 10.8 54 417-470 236-289 (363)
4 1zb1_A BRO1 protein; AIP1, BRO 76.5 7.2 0.00025 39.7 8.6 77 388-469 217-293 (392)
5 2xs1_A Programmed cell death 6 75.4 9.6 0.00033 41.9 9.8 72 388-469 225-296 (704)
6 3n71_A Histone lysine methyltr 74.6 45 0.0015 34.7 14.4 62 384-466 365-426 (490)
7 3qww_A SET and MYND domain-con 73.5 49 0.0017 33.8 14.1 62 384-466 354-415 (433)
8 4g1t_A Interferon-induced prot 60.7 1.3E+02 0.0044 29.4 21.5 62 124-186 106-167 (472)
9 3ro3_A PINS homolog, G-protein 59.1 33 0.0011 27.3 7.8 60 126-190 23-82 (164)
10 3qwp_A SET and MYND domain-con 57.1 32 0.0011 35.1 8.9 32 435-466 373-404 (429)
11 3ro3_A PINS homolog, G-protein 54.3 24 0.00084 28.1 6.1 58 126-188 103-160 (164)
12 3ma5_A Tetratricopeptide repea 54.1 15 0.00052 28.4 4.6 28 437-464 45-72 (100)
13 2v5f_A Prolyl 4-hydroxylase su 53.9 15 0.00051 29.1 4.6 30 434-463 6-35 (104)
14 3gw4_A Uncharacterized protein 53.6 45 0.0015 28.2 8.1 64 124-192 119-182 (203)
15 4ga2_A E3 SUMO-protein ligase 51.1 16 0.00054 30.7 4.5 25 437-461 35-59 (150)
16 2v6y_A AAA family ATPase, P60 49.4 33 0.0011 26.8 5.8 37 432-468 10-46 (83)
17 3ma5_A Tetratricopeptide repea 48.6 17 0.00059 28.1 4.1 26 437-462 11-36 (100)
18 1na3_A Designed protein CTPR2; 48.0 20 0.00068 26.1 4.2 22 439-460 15-36 (91)
19 2w2u_A Hypothetical P60 katani 47.5 37 0.0013 26.6 5.8 34 436-469 22-55 (83)
20 2rpa_A Katanin P60 ATPase-cont 46.3 23 0.00077 27.7 4.2 32 438-469 17-48 (78)
21 2xcb_A PCRH, regulatory protei 45.9 1E+02 0.0035 24.9 8.9 27 437-463 90-116 (142)
22 2kc7_A BFR218_protein; tetratr 44.6 21 0.00071 26.9 3.9 26 437-462 39-64 (99)
23 3gyz_A Chaperone protein IPGC; 44.4 1E+02 0.0035 26.0 8.9 28 436-463 107-134 (151)
24 3k9i_A BH0479 protein; putativ 41.5 25 0.00085 27.7 4.1 23 439-461 33-55 (117)
25 3gw4_A Uncharacterized protein 40.8 90 0.0031 26.2 8.0 60 125-189 39-98 (203)
26 3qww_A SET and MYND domain-con 40.3 62 0.0021 33.0 7.8 62 384-466 312-373 (433)
27 3edt_B KLC 2, kinesin light ch 39.8 1.6E+02 0.0055 25.7 9.9 66 125-193 56-121 (283)
28 2l6j_A TPR repeat-containing p 39.6 37 0.0012 25.6 4.7 27 437-463 42-68 (111)
29 1na3_A Designed protein CTPR2; 39.6 30 0.001 25.1 4.1 26 437-462 47-72 (91)
30 4gcn_A Protein STI-1; structur 39.5 77 0.0026 25.4 6.9 54 125-183 55-109 (127)
31 3k9i_A BH0479 protein; putativ 39.2 27 0.00092 27.5 3.9 26 437-462 65-90 (117)
32 1zu2_A Mitochondrial import re 38.9 2E+02 0.0067 25.1 10.6 21 388-408 57-77 (158)
33 3qky_A Outer membrane assembly 38.0 1.3E+02 0.0046 26.8 9.1 28 435-462 150-177 (261)
34 2kat_A Uncharacterized protein 37.9 35 0.0012 26.5 4.4 28 437-464 57-84 (115)
35 2kat_A Uncharacterized protein 37.8 31 0.0011 26.8 4.1 26 437-462 23-48 (115)
36 2l6j_A TPR repeat-containing p 37.1 26 0.00088 26.6 3.4 14 385-398 19-32 (111)
37 2xev_A YBGF; tetratricopeptide 36.6 33 0.0011 26.8 4.1 26 437-462 43-68 (129)
38 2kck_A TPR repeat; tetratricop 36.5 35 0.0012 25.4 4.1 26 437-462 44-69 (112)
39 4gco_A Protein STI-1; structur 36.4 77 0.0026 25.5 6.5 26 437-462 85-110 (126)
40 3upv_A Heat shock protein STI1 36.4 57 0.002 25.5 5.6 27 437-463 76-102 (126)
41 4a5x_A MITD1, MIT domain-conta 35.6 72 0.0025 25.0 5.8 29 440-468 23-51 (86)
42 1hxi_A PEX5, peroxisome target 35.5 35 0.0012 27.4 4.1 26 437-462 55-80 (121)
43 3rkv_A Putative peptidylprolyl 35.1 1.7E+02 0.0057 24.0 8.6 27 437-463 101-127 (162)
44 1wfd_A Hypothetical protein 15 34.6 74 0.0025 25.3 5.8 32 437-468 19-50 (93)
45 2crb_A Nuclear receptor bindin 34.5 48 0.0016 26.8 4.4 31 439-469 21-51 (97)
46 2vgx_A Chaperone SYCD; alterna 34.4 35 0.0012 28.5 4.1 26 437-462 93-118 (148)
47 3vtx_A MAMA; tetratricopeptide 34.1 33 0.0011 29.0 3.9 26 437-462 145-170 (184)
48 2xcb_A PCRH, regulatory protei 33.9 37 0.0013 27.7 4.1 26 437-462 56-81 (142)
49 3upv_A Heat shock protein STI1 33.7 49 0.0017 25.9 4.7 27 436-462 41-67 (126)
50 2hr2_A Hypothetical protein; a 33.3 84 0.0029 27.6 6.4 65 382-464 69-133 (159)
51 4gco_A Protein STI-1; structur 33.3 39 0.0013 27.4 4.1 12 311-322 29-40 (126)
52 3edt_B KLC 2, kinesin light ch 33.2 1.6E+02 0.0055 25.7 8.7 63 126-191 99-161 (283)
53 3n71_A Histone lysine methyltr 32.6 86 0.003 32.5 7.5 61 384-465 323-383 (490)
54 2vgx_A Chaperone SYCD; alterna 32.5 39 0.0013 28.2 4.1 26 437-462 59-84 (148)
55 3gyz_A Chaperone protein IPGC; 32.4 39 0.0013 28.8 4.1 25 438-462 75-99 (151)
56 1na0_A Designed protein CTPR3; 31.9 48 0.0016 25.0 4.2 24 438-461 48-71 (125)
57 3vtx_A MAMA; tetratricopeptide 31.7 2.2E+02 0.0075 23.5 10.2 26 437-462 111-136 (184)
58 4gcn_A Protein STI-1; structur 31.4 53 0.0018 26.5 4.6 27 438-464 47-73 (127)
59 1elr_A TPR2A-domain of HOP; HO 30.9 57 0.002 24.9 4.6 28 437-464 42-69 (131)
60 1elr_A TPR2A-domain of HOP; HO 30.1 63 0.0022 24.6 4.7 27 436-462 7-33 (131)
61 4ga2_A E3 SUMO-protein ligase 29.9 75 0.0026 26.3 5.5 25 438-462 70-94 (150)
62 3u3w_A Transcriptional activat 29.5 1.2E+02 0.004 28.0 7.3 28 437-464 200-227 (293)
63 2xev_A YBGF; tetratricopeptide 29.1 52 0.0018 25.6 4.1 37 437-473 80-122 (129)
64 2v6x_A Vacuolar protein sortin 29.1 1.1E+02 0.0037 23.6 5.8 29 440-468 20-48 (85)
65 2kck_A TPR repeat; tetratricop 28.9 39 0.0013 25.1 3.1 26 437-462 10-35 (112)
66 2lni_A Stress-induced-phosphop 28.8 56 0.0019 25.2 4.2 26 437-462 88-113 (133)
67 2v5f_A Prolyl 4-hydroxylase su 28.8 54 0.0018 25.7 4.1 26 437-462 50-75 (104)
68 2vyi_A SGTA protein; chaperone 28.5 55 0.0019 24.9 4.1 26 437-462 84-109 (131)
69 3ulq_A Response regulator aspa 28.4 3.8E+02 0.013 25.3 20.4 194 156-465 103-296 (383)
70 2cpt_A SKD1 protein, vacuolar 28.3 96 0.0033 25.8 5.6 26 442-467 27-52 (117)
71 3rkv_A Putative peptidylprolyl 28.1 52 0.0018 27.3 4.1 21 309-329 25-45 (162)
72 1na0_A Designed protein CTPR3; 27.3 64 0.0022 24.3 4.2 26 437-462 81-106 (125)
73 2kc7_A BFR218_protein; tetratr 27.1 59 0.002 24.1 3.9 26 437-462 4-29 (99)
74 1elw_A TPR1-domain of HOP; HOP 27.0 59 0.002 24.3 3.9 25 438-462 43-67 (118)
75 2fo7_A Synthetic consensus TPR 26.7 62 0.0021 24.6 4.1 25 438-462 40-64 (136)
76 3sz7_A HSC70 cochaperone (SGT) 26.5 57 0.002 27.1 4.1 26 437-462 83-108 (164)
77 2lni_A Stress-induced-phosphop 26.3 55 0.0019 25.2 3.7 26 437-462 54-79 (133)
78 1elw_A TPR1-domain of HOP; HOP 26.2 84 0.0029 23.3 4.7 27 436-462 7-33 (118)
79 3q49_B STIP1 homology and U bo 26.1 75 0.0026 24.9 4.6 29 437-465 81-109 (137)
80 3sz7_A HSC70 cochaperone (SGT) 25.8 76 0.0026 26.3 4.7 26 437-462 49-74 (164)
81 2vyi_A SGTA protein; chaperone 25.5 71 0.0024 24.2 4.2 26 437-462 50-75 (131)
82 2dl1_A Spartin; SPG20, MIT, st 25.4 1.7E+02 0.0057 24.5 6.5 43 426-468 15-57 (116)
83 3q49_B STIP1 homology and U bo 25.3 66 0.0023 25.3 4.1 23 439-461 15-37 (137)
84 2dba_A Smooth muscle cell asso 24.6 65 0.0022 25.4 3.9 26 437-462 103-128 (148)
85 1hxi_A PEX5, peroxisome target 24.4 70 0.0024 25.5 4.1 27 436-462 20-46 (121)
86 2yhc_A BAMD, UPF0169 lipoprote 24.3 2.6E+02 0.009 24.3 8.4 26 437-462 151-176 (225)
87 2dba_A Smooth muscle cell asso 24.2 75 0.0026 25.0 4.2 26 437-462 69-94 (148)
88 3bee_A Putative YFRE protein; 24.1 59 0.002 25.4 3.4 25 437-461 47-71 (93)
89 1qqe_A Vesicular transport pro 23.8 2.3E+02 0.0078 26.1 8.2 28 437-464 81-108 (292)
90 2hr2_A Hypothetical protein; a 23.7 86 0.0029 27.5 4.7 32 154-186 9-40 (159)
91 4b4t_Q 26S proteasome regulato 23.6 2.2E+02 0.0075 27.3 8.3 60 126-190 149-208 (434)
92 2qfc_A PLCR protein; TPR, HTH, 23.4 1.7E+02 0.006 26.8 7.3 61 383-465 168-228 (293)
93 2fbn_A 70 kDa peptidylprolyl i 23.4 1.4E+02 0.0048 25.5 6.2 26 437-462 126-151 (198)
94 1a17_A Serine/threonine protei 22.8 80 0.0027 25.4 4.2 26 437-462 85-110 (166)
95 3qwp_A SET and MYND domain-con 22.5 66 0.0023 32.7 4.3 27 439-465 335-361 (429)
96 2y4t_A DNAJ homolog subfamily 22.3 3.3E+02 0.011 26.0 9.3 26 437-462 181-206 (450)
97 1p5q_A FKBP52, FK506-binding p 22.1 1.5E+02 0.0051 28.3 6.6 26 437-462 234-259 (336)
98 1a17_A Serine/threonine protei 21.8 87 0.003 25.2 4.2 26 437-462 51-76 (166)
99 2e2e_A Formate-dependent nitri 21.5 85 0.0029 26.1 4.2 26 437-462 48-73 (177)
100 2vq2_A PILW, putative fimbrial 21.5 2.3E+02 0.0078 23.7 7.2 28 436-463 150-177 (225)
101 1pc2_A Mitochondria fission pr 21.4 82 0.0028 27.5 4.0 27 436-462 74-100 (152)
102 2fo7_A Synthetic consensus TPR 21.3 95 0.0033 23.4 4.2 25 438-462 74-98 (136)
103 2fbn_A 70 kDa peptidylprolyl i 21.0 2E+02 0.0068 24.4 6.7 59 127-186 53-117 (198)
104 3urz_A Uncharacterized protein 21.0 85 0.0029 27.5 4.2 26 437-462 92-117 (208)
105 4gyw_A UDP-N-acetylglucosamine 20.6 4.1E+02 0.014 28.8 10.4 29 438-466 150-178 (723)
No 1
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=83.62 E-value=3.7 Score=41.67 Aligned_cols=57 Identities=18% Similarity=0.067 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhc
Q 011474 417 EVKFAEECELKSLAFRAERCFYLARSYSLAGKRTEAYALYCRARSHAENALKDFQRM 473 (485)
Q Consensus 417 d~~l~~~l~a~~~~~~A~Rc~~lA~~y~~~~K~~EAlaL~~ra~~~~~~a~~~~~~~ 473 (485)
+..+..-+..+..+|+|.=|||.|......+|+.||++-++.|.+.+.++....+..
T Consensus 237 ~~~W~~~v~~K~~~~~A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~l~~a~~~~~~~ 293 (376)
T 3r9m_A 237 SAKWRKYLHLKMCFYTAYAYCYHGETLLASDKCGEAIRSLQEAEKLYAKAEALCKEY 293 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456888999999999999999999999999999999999999999999998876543
No 2
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=82.40 E-value=4.8 Score=40.88 Aligned_cols=72 Identities=8% Similarity=-0.053 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 011474 388 ELVRLYDLLLQNTADLSDLVSSGRERKPEEVKFAEECELKSLAFRAERCFYLARSYSLAGKRTEAYALYCRARSHAENAL 467 (485)
Q Consensus 388 eivRLyd~ilq~l~ei~eLpg~~~~~v~~d~~l~~~l~a~~~~~~A~Rc~~lA~~y~~~~K~~EAlaL~~ra~~~~~~a~ 467 (485)
++..+|+.....+. +.+ .-+..+..-+..+..+|+|.=|||.|...-..+|+.||++.+..|.+.+.++.
T Consensus 240 ~~~~~Y~~A~~~l~----~~~------~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~ 309 (380)
T 3c3r_A 240 QAADYFGDAFKQCQ----YKD------TLPKEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIARLQHAAELIKTVA 309 (380)
T ss_dssp HHHHHHHHHHHHHT----TCC------CSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc----ccc------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH
Confidence 35566666666655 222 12357888899999999999999999999999999999999999999999887
Q ss_pred HH
Q 011474 468 KD 469 (485)
Q Consensus 468 ~~ 469 (485)
..
T Consensus 310 ~~ 311 (380)
T 3c3r_A 310 SR 311 (380)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 3
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=81.26 E-value=8.5 Score=38.78 Aligned_cols=54 Identities=17% Similarity=0.129 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHH
Q 011474 417 EVKFAEECELKSLAFRAERCFYLARSYSLAGKRTEAYALYCRARSHAENALKDF 470 (485)
Q Consensus 417 d~~l~~~l~a~~~~~~A~Rc~~lA~~y~~~~K~~EAlaL~~ra~~~~~~a~~~~ 470 (485)
+.++..-+..+..+|+|.=|||.|......+|+.||++-++.|...+.+|...-
T Consensus 236 ~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~~~~ 289 (363)
T 3rau_A 236 QKDWKKLVQMKIYYFAAVAHLHMGKQAEEQQKFGERVAYFQSALDKLNEAIKLA 289 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 468888899999999999999999999999999999999999999999887653
No 4
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=76.49 E-value=7.2 Score=39.65 Aligned_cols=77 Identities=12% Similarity=0.051 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 011474 388 ELVRLYDLLLQNTADLSDLVSSGRERKPEEVKFAEECELKSLAFRAERCFYLARSYSLAGKRTEAYALYCRARSHAENAL 467 (485)
Q Consensus 388 eivRLyd~ilq~l~ei~eLpg~~~~~v~~d~~l~~~l~a~~~~~~A~Rc~~lA~~y~~~~K~~EAlaL~~ra~~~~~~a~ 467 (485)
++..+|+.....+... ++... ..-+..+..-+..+..+|+|.=|||.|...-..+|+.||++.+..|.+.+.++.
T Consensus 217 ~~~~~Y~~a~~~l~~~---~~~~~--~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~ 291 (392)
T 1zb1_A 217 ATCNLFQKCHDFMKEI---DDDVA--IYGEPKWKTTVTCKLHFYKSLSAYYHGLHLEEENRVGEAIAFLDFSMQQLISSL 291 (392)
T ss_dssp HHHHHHHHHHHHHHSC---CCTTT--SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHhhc---ccccc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 4556677766666532 21100 123578899999999999999999999999999999999999999999998877
Q ss_pred HH
Q 011474 468 KD 469 (485)
Q Consensus 468 ~~ 469 (485)
..
T Consensus 292 ~~ 293 (392)
T 1zb1_A 292 PF 293 (392)
T ss_dssp GG
T ss_pred Hh
Confidence 54
No 5
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=75.45 E-value=9.6 Score=41.89 Aligned_cols=72 Identities=7% Similarity=-0.091 Sum_probs=58.4
Q ss_pred hHHHHHHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 011474 388 ELVRLYDLLLQNTADLSDLVSSGRERKPEEVKFAEECELKSLAFRAERCFYLARSYSLAGKRTEAYALYCRARSHAENAL 467 (485)
Q Consensus 388 eivRLyd~ilq~l~ei~eLpg~~~~~v~~d~~l~~~l~a~~~~~~A~Rc~~lA~~y~~~~K~~EAlaL~~ra~~~~~~a~ 467 (485)
++..+|+.....+. +.+ .-+..+..-+..+..+|+|.=|||.|......+||.||++.+..|...+.++.
T Consensus 225 ~~~~~Y~~A~~~l~----~~~------~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~ 294 (704)
T 2xs1_A 225 QAADYFGDAFKQCQ----YKD------TLPKEVFPVLAAKHCIMQANAEYHQSILAKQQYYFGEEIARLQHAAELIKTVA 294 (704)
T ss_dssp HHHHHHHHHHHHHH----TCC------CSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc----ccc------cccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 35566776666665 211 12347888899999999999999999999999999999999999999999887
Q ss_pred HH
Q 011474 468 KD 469 (485)
Q Consensus 468 ~~ 469 (485)
..
T Consensus 295 ~~ 296 (704)
T 2xs1_A 295 SR 296 (704)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 6
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=74.56 E-value=45 Score=34.74 Aligned_cols=62 Identities=11% Similarity=0.066 Sum_probs=46.1
Q ss_pred CChhhHHHHHHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 011474 384 TKPEELVRLYDLLLQNTADLSDLVSSGRERKPEEVKFAEECELKSLAFRAERCFYLARSYSLAGKRTEAYALYCRARSHA 463 (485)
Q Consensus 384 ~k~~eivRLyd~ilq~l~ei~eLpg~~~~~v~~d~~l~~~l~a~~~~~~A~Rc~~lA~~y~~~~K~~EAlaL~~ra~~~~ 463 (485)
.++.+-..+|.-.+...+.+. | .+..+....+ .-||.+|...|+|.||..+|.+|+...
T Consensus 365 g~~~eA~~~~~~aL~i~~~~l---G------~~Hp~~a~~l------------~nLa~~~~~~G~~~eA~~~~~~Al~i~ 423 (490)
T 3n71_A 365 QAYEEASHYARRMVDGYMKLY---H------HNNAQLGMAV------------MRAGLTNWHAGHIEVGHGMICKAYAIL 423 (490)
T ss_dssp TCHHHHHHHHHHHHHHHHHHS---C------TTCHHHHHHH------------HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHc---C------CCCHHHHHHH------------HHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 467788888888888777653 3 2444443332 349999999999999999999999877
Q ss_pred HHH
Q 011474 464 ENA 466 (485)
Q Consensus 464 ~~a 466 (485)
+.+
T Consensus 424 ~~~ 426 (490)
T 3n71_A 424 LVT 426 (490)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 7
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=73.51 E-value=49 Score=33.85 Aligned_cols=62 Identities=13% Similarity=0.035 Sum_probs=47.6
Q ss_pred CChhhHHHHHHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 011474 384 TKPEELVRLYDLLLQNTADLSDLVSSGRERKPEEVKFAEECELKSLAFRAERCFYLARSYSLAGKRTEAYALYCRARSHA 463 (485)
Q Consensus 384 ~k~~eivRLyd~ilq~l~ei~eLpg~~~~~v~~d~~l~~~l~a~~~~~~A~Rc~~lA~~y~~~~K~~EAlaL~~ra~~~~ 463 (485)
.++++=..+|.-.+...+.+. | .+..+....+ .-||.+|...|+|.||..+|.+|+...
T Consensus 354 g~~~eA~~~~~~aL~i~~~~l---G------~~Hp~~a~~l------------~nLa~~~~~qg~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 354 QDWEGALKYGQKIIKPYSKHY---P------VYSLNVASMW------------LKLGRLYMGLENKAAGEKALKKAIAIM 412 (433)
T ss_dssp TCHHHHHHHHHHHHHHHHHHS---C------SSCHHHHHHH------------HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHc---C------CCChHHHHHH------------HHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 467888889998888888763 3 2444443333 249999999999999999999999987
Q ss_pred HHH
Q 011474 464 ENA 466 (485)
Q Consensus 464 ~~a 466 (485)
..+
T Consensus 413 ~~~ 415 (433)
T 3qww_A 413 EVA 415 (433)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 8
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=60.65 E-value=1.3e+02 Score=29.42 Aligned_cols=62 Identities=18% Similarity=0.124 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Q 011474 124 LIGRLRKAVKWATLFSNLCAIKADPRTSLEAEAYASYMKGNLLFEQDQNWETALKNFKSARAV 186 (485)
Q Consensus 124 ~~~RLkKA~~~A~~L~~l~~~~~d~~t~lEa~aY~~~i~G~~~~E~~~~W~~Al~~~~~ar~i 186 (485)
.++++.+|..+-.+..+++....+.....-+.+|...-.+.+.+.++ +|++|+..|..|-.+
T Consensus 106 ~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~y~~A~~~~~kal~~ 167 (472)
T 4g1t_A 106 HMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGN-QNERAKVCFEKALEK 167 (472)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHH
T ss_pred HcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccc-cHHHHHHHHHHHHHh
Confidence 35677899999888888887554332211234455444445666676 999999999887443
No 9
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=59.13 E-value=33 Score=27.28 Aligned_cols=60 Identities=23% Similarity=0.159 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHH
Q 011474 126 GRLRKAVKWATLFSNLCAIKADPRTSLEAEAYASYMKGNLLFEQDQNWETALKNFKSARAVYEEL 190 (485)
Q Consensus 126 ~RLkKA~~~A~~L~~l~~~~~d~~t~lEa~aY~~~i~G~~~~E~~~~W~~Al~~~~~ar~iy~~L 190 (485)
.++.+|+.+..+.+.++....+... .+...+..|..++..+ +|++|+..|..+-.++...
T Consensus 23 ~~~~~A~~~~~~al~~~~~~~~~~~----~~~~~~~l~~~~~~~g-~~~~A~~~~~~a~~~~~~~ 82 (164)
T 3ro3_A 23 GNFRDAVIAHEQRLLIAKEFGDKAA----ERIAYSNLGNAYIFLG-EFETASEYYKKTLLLARQL 82 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHH----HHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHHHHhCCchH----HHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHh
Confidence 4566888888888887766555433 3455666788889897 9999999999998776654
No 10
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=57.14 E-value=32 Score=35.06 Aligned_cols=32 Identities=9% Similarity=-0.083 Sum_probs=27.9
Q ss_pred hHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Q 011474 435 RCFYLARSYSLAGKRTEAYALYCRARSHAENA 466 (485)
Q Consensus 435 Rc~~lA~~y~~~~K~~EAlaL~~ra~~~~~~a 466 (485)
-.+-||.+|...|+|.||+.+|.+|+.....+
T Consensus 373 ~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~ 404 (429)
T 3qwp_A 373 QVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVT 404 (429)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 34569999999999999999999999877765
No 11
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=54.27 E-value=24 Score=28.14 Aligned_cols=58 Identities=16% Similarity=0.122 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHH
Q 011474 126 GRLRKAVKWATLFSNLCAIKADPRTSLEAEAYASYMKGNLLFEQDQNWETALKNFKSARAVYE 188 (485)
Q Consensus 126 ~RLkKA~~~A~~L~~l~~~~~d~~t~lEa~aY~~~i~G~~~~E~~~~W~~Al~~~~~ar~iy~ 188 (485)
.++.+|..+....++++....+... .+......|..++..+ +|++|+..+..+..+..
T Consensus 103 ~~~~~A~~~~~~a~~~~~~~~~~~~----~~~~~~~la~~~~~~g-~~~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 103 QDYEKAIDYHLKHLAIAQELKDRIG----EGRACWSLGNAYTALG-NHDQAMHFAEKHLEISR 160 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHH----HHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHccchHh----HHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHHHH
Confidence 3455666666666666554433322 2334445566666666 77777777777766543
No 12
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=54.14 E-value=15 Score=28.44 Aligned_cols=28 Identities=18% Similarity=0.322 Sum_probs=24.8
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSHAE 464 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~~~ 464 (485)
+.+|.+|...|+|.+|+..|.++.....
T Consensus 45 ~~lg~~~~~~g~~~~A~~~~~~al~l~~ 72 (100)
T 3ma5_A 45 YHLGKLYERLDRTDDAIDTYAQGIEVAR 72 (100)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhhh
Confidence 4589999999999999999999987654
No 13
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=53.90 E-value=15 Score=29.11 Aligned_cols=30 Identities=17% Similarity=0.134 Sum_probs=27.2
Q ss_pred hhHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 011474 434 ERCFYLARSYSLAGKRTEAYALYCRARSHA 463 (485)
Q Consensus 434 ~Rc~~lA~~y~~~~K~~EAlaL~~ra~~~~ 463 (485)
.=||.||..+...|.|..|..-|..|....
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~ 35 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQL 35 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhh
Confidence 349999999999999999999999998875
No 14
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=53.63 E-value=45 Score=28.22 Aligned_cols=64 Identities=22% Similarity=0.139 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHhc
Q 011474 124 LIGRLRKAVKWATLFSNLCAIKADPRTSLEAEAYASYMKGNLLFEQDQNWETALKNFKSARAVYEELGK 192 (485)
Q Consensus 124 ~~~RLkKA~~~A~~L~~l~~~~~d~~t~lEa~aY~~~i~G~~~~E~~~~W~~Al~~~~~ar~iy~~La~ 192 (485)
...++.+|..+..+...++....+... .++.....|.+++..+ +|++|...|..+-.++..+..
T Consensus 119 ~~g~~~~A~~~~~~al~~~~~~~~~~~----~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~~~~~~ 182 (203)
T 3gw4_A 119 HFGDLAGARQEYEKSLVYAQQADDQVA----IACAFRGLGDLAQQEK-NLLEAQQHWLRARDIFAELED 182 (203)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHTTCHHH----HHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHTTC
T ss_pred HhCCHHHHHHHHHHHHHHHHhccchHH----HHHHHHHHHHHHHHCc-CHHHHHHHHHHHHHHHHHcCC
Confidence 345677888888888888766555443 2444566788889887 999999999999888776643
No 15
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=51.08 E-value=16 Score=30.73 Aligned_cols=25 Identities=28% Similarity=0.369 Sum_probs=12.0
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARS 461 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~ 461 (485)
|.||.+|...|+|.+|+..|.++.+
T Consensus 35 ~~la~~y~~~~~~~~A~~~~~~al~ 59 (150)
T 4ga2_A 35 FYFAKLYYEAKEYDLAKKYICTYIN 59 (150)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4444445445555554444444443
No 16
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=49.41 E-value=33 Score=26.78 Aligned_cols=37 Identities=22% Similarity=0.179 Sum_probs=28.7
Q ss_pred HHhhHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 011474 432 RAERCFYLARSYSLAGKRTEAYALYCRARSHAENALK 468 (485)
Q Consensus 432 ~A~Rc~~lA~~y~~~~K~~EAlaL~~ra~~~~~~a~~ 468 (485)
+|...+.-|--.-..|+|.||+.||..+.+.+..+..
T Consensus 10 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~lk 46 (83)
T 2v6y_A 10 MARKYAILAVKADKEGKVEDAITYYKKAIEVLSQIIV 46 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 4444555566668889999999999999999888764
No 17
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=48.63 E-value=17 Score=28.11 Aligned_cols=26 Identities=19% Similarity=0.181 Sum_probs=23.3
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|+++.+.
T Consensus 11 ~~lg~~~~~~g~~~~A~~~~~~al~~ 36 (100)
T 3ma5_A 11 YALAQEHLKHDNASRALALFEELVET 36 (100)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 55899999999999999999999874
No 18
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=48.00 E-value=20 Score=26.12 Aligned_cols=22 Identities=32% Similarity=0.431 Sum_probs=10.6
Q ss_pred HHHHHHhcCChHHHHHHHHHHH
Q 011474 439 LARSYSLAGKRTEAYALYCRAR 460 (485)
Q Consensus 439 lA~~y~~~~K~~EAlaL~~ra~ 460 (485)
+|.+|...|+|.+|+..|.++.
T Consensus 15 la~~~~~~~~~~~A~~~~~~a~ 36 (91)
T 1na3_A 15 LGNAYYKQGDYDEAIEYYQKAL 36 (91)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHH
Confidence 4444444444444444444444
No 19
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=47.47 E-value=37 Score=26.57 Aligned_cols=34 Identities=18% Similarity=0.021 Sum_probs=27.0
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Q 011474 436 CFYLARSYSLAGKRTEAYALYCRARSHAENALKD 469 (485)
Q Consensus 436 c~~lA~~y~~~~K~~EAlaL~~ra~~~~~~a~~~ 469 (485)
.+.-|--.-..|+|.||+.+|..+.+.+..+...
T Consensus 22 lv~~Ave~D~~g~y~eAl~lY~~aie~l~~alk~ 55 (83)
T 2w2u_A 22 YAINAVKADKEGNAEEAITNYKKAIEVLAQLVSL 55 (83)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 3334555678899999999999999999887654
No 20
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=46.30 E-value=23 Score=27.67 Aligned_cols=32 Identities=28% Similarity=0.358 Sum_probs=27.7
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Q 011474 438 YLARSYSLAGKRTEAYALYCRARSHAENALKD 469 (485)
Q Consensus 438 ~lA~~y~~~~K~~EAlaL~~ra~~~~~~a~~~ 469 (485)
.+|+-|+..|.|..|+..|+.+.+.+..-...
T Consensus 17 k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~ 48 (78)
T 2rpa_A 17 KLAREYALLGNYDSAMVYYQGVLDQMNKYLYS 48 (78)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 38999999999999999999999988755443
No 21
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=45.88 E-value=1e+02 Score=24.86 Aligned_cols=27 Identities=26% Similarity=0.162 Sum_probs=23.7
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSHA 463 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~~ 463 (485)
+.+|.+|...|+|.+|+..|.++....
T Consensus 90 ~~lg~~~~~~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 90 FHAAECHLQLGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 569999999999999999999987654
No 22
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=44.63 E-value=21 Score=26.89 Aligned_cols=26 Identities=19% Similarity=0.302 Sum_probs=22.8
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++...
T Consensus 39 ~~lg~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 39 YLMGNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 44899999999999999999998764
No 23
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=44.45 E-value=1e+02 Score=26.01 Aligned_cols=28 Identities=11% Similarity=-0.002 Sum_probs=24.1
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 011474 436 CFYLARSYSLAGKRTEAYALYCRARSHA 463 (485)
Q Consensus 436 c~~lA~~y~~~~K~~EAlaL~~ra~~~~ 463 (485)
-|.+|.+|...|++.+|+..|.++....
T Consensus 107 ~~~lg~~~~~lg~~~eA~~~~~~al~l~ 134 (151)
T 3gyz_A 107 VFHTGQCQLRLKAPLKAKECFELVIQHS 134 (151)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 3668999999999999999999998753
No 24
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=41.50 E-value=25 Score=27.71 Aligned_cols=23 Identities=17% Similarity=0.270 Sum_probs=15.0
Q ss_pred HHHHHHhcCChHHHHHHHHHHHH
Q 011474 439 LARSYSLAGKRTEAYALYCRARS 461 (485)
Q Consensus 439 lA~~y~~~~K~~EAlaL~~ra~~ 461 (485)
+|.+|...|+|.+|+..|.++.+
T Consensus 33 lg~~~~~~~~~~~A~~~~~~al~ 55 (117)
T 3k9i_A 33 LGSTFRTLGEYRKAEAVLANGVK 55 (117)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHH
Confidence 66666666666666666666654
No 25
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=40.76 E-value=90 Score=26.21 Aligned_cols=60 Identities=18% Similarity=0.203 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Q 011474 125 IGRLRKAVKWATLFSNLCAIKADPRTSLEAEAYASYMKGNLLFEQDQNWETALKNFKSARAVYEE 189 (485)
Q Consensus 125 ~~RLkKA~~~A~~L~~l~~~~~d~~t~lEa~aY~~~i~G~~~~E~~~~W~~Al~~~~~ar~iy~~ 189 (485)
.+++.+|..+..+.+.++....+... .+...+..|..++..+ +|++|+..|..+..++..
T Consensus 39 ~g~~~~A~~~~~~al~~~~~~~~~~~----~~~~~~~l~~~~~~~g-~~~~A~~~~~~al~~~~~ 98 (203)
T 3gw4_A 39 MDRFDEARASFQALQQQAQKSGDHTA----EHRALHQVGMVERMAG-NWDAARRCFLEERELLAS 98 (203)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTCCHHH----HHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHH
T ss_pred hCcHHHHHHHHHHHHHHHHHcCCcHH----HHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHH
Confidence 34566888888888888876555443 3445566788888887 999999999999888764
No 26
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=40.33 E-value=62 Score=33.04 Aligned_cols=62 Identities=10% Similarity=0.019 Sum_probs=43.0
Q ss_pred CChhhHHHHHHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 011474 384 TKPEELVRLYDLLLQNTADLSDLVSSGRERKPEEVKFAEECELKSLAFRAERCFYLARSYSLAGKRTEAYALYCRARSHA 463 (485)
Q Consensus 384 ~k~~eivRLyd~ilq~l~ei~eLpg~~~~~v~~d~~l~~~l~a~~~~~~A~Rc~~lA~~y~~~~K~~EAlaL~~ra~~~~ 463 (485)
.++.|-+.+|.-.+...+.+. | .+.......+ -. ||.+|...|+|.||+.+|.+++...
T Consensus 312 g~~~eA~~~~~~~L~i~~~~l---g------~~Hp~~a~~~----------~n--La~~y~~~g~~~eA~~~~~~aL~i~ 370 (433)
T 3qww_A 312 KSPSELLEICELSQEKMSSVF---E------DSNVYMLHMM----------YQ--AMGVCLYMQDWEGALKYGQKIIKPY 370 (433)
T ss_dssp SCHHHHHHHHHHHHHHHTTTB---C------TTSHHHHHHH----------HH--HHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhhCcc---C------hhchHHHHHH----------HH--HHHHHHhhcCHHHHHHHHHHHHHHH
Confidence 467788888777766665432 3 2334333222 23 8999999999999999999998876
Q ss_pred HHH
Q 011474 464 ENA 466 (485)
Q Consensus 464 ~~a 466 (485)
...
T Consensus 371 ~~~ 373 (433)
T 3qww_A 371 SKH 373 (433)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 27
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=39.82 E-value=1.6e+02 Score=25.74 Aligned_cols=66 Identities=11% Similarity=-0.051 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHhcC
Q 011474 125 IGRLRKAVKWATLFSNLCAIKADPRTSLEAEAYASYMKGNLLFEQDQNWETALKNFKSARAVYEELGKY 193 (485)
Q Consensus 125 ~~RLkKA~~~A~~L~~l~~~~~d~~t~lEa~aY~~~i~G~~~~E~~~~W~~Al~~~~~ar~iy~~La~~ 193 (485)
.+++.+|..+....+++............+ ......|.+++..+ +|++|+..|..+-.++..+...
T Consensus 56 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~--~~~~~l~~~~~~~g-~~~~A~~~~~~al~~~~~~~~~ 121 (283)
T 3edt_B 56 QNKYKEAAHLLNDALAIREKTLGKDHPAVA--ATLNNLAVLYGKRG-KYKEAEPLCKRALEIREKVLGK 121 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCTTCHHHH--HHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHHHCT
T ss_pred cccHHHHHHHHHHHHHHHHHHcCCcchHHH--HHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHcCC
Confidence 455678888888888777554211122223 34455688888887 9999999999998888776543
No 28
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=39.61 E-value=37 Score=25.62 Aligned_cols=27 Identities=15% Similarity=0.003 Sum_probs=20.5
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSHA 463 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~~ 463 (485)
+.+|.+|...|+|.+|+..|.++...-
T Consensus 42 ~~lg~~~~~~g~~~~A~~~~~~al~~~ 68 (111)
T 2l6j_A 42 SNKAMALIKLGEYTQAIQMCQQGLRYT 68 (111)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 457888888888888888888877643
No 29
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=39.60 E-value=30 Score=25.05 Aligned_cols=26 Identities=27% Similarity=0.391 Sum_probs=23.2
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++...
T Consensus 47 ~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 47 YNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 45899999999999999999999875
No 30
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=39.47 E-value=77 Score=25.43 Aligned_cols=54 Identities=17% Similarity=0.166 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC-ChhhHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHH
Q 011474 125 IGRLRKAVKWATLFSNLCAIKA-DPRTSLEAEAYASYMKGNLLFEQDQNWETALKNFKSA 183 (485)
Q Consensus 125 ~~RLkKA~~~A~~L~~l~~~~~-d~~t~lEa~aY~~~i~G~~~~E~~~~W~~Al~~~~~a 183 (485)
++++.+|+.+....+++..+.. +.... +.+-+..|......+ +|++|+..|..|
T Consensus 55 ~~~~~~A~~~~~~al~~~~~~~~~~~~~----a~~~~~lg~~~~~~~-~~~~A~~~~~ka 109 (127)
T 4gcn_A 55 EKKFAECVQFCEKAVEVGRETRADYKLI----AKAMSRAGNAFQKQN-DLSLAVQWFHRS 109 (127)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCCHHHH----HHHHHHHHHHHHHTT-CHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhCcccchhhHHH----HHHHHHHHHHHHHcC-CHHHHHHHHHHH
Confidence 4567789998888888875443 33322 333455788888887 999999999877
No 31
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=39.15 E-value=27 Score=27.50 Aligned_cols=26 Identities=12% Similarity=0.140 Sum_probs=23.4
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++...
T Consensus 65 ~~l~~~~~~~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 65 VFYAMVLYNLGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 34899999999999999999999876
No 32
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=38.93 E-value=2e+02 Score=25.13 Aligned_cols=21 Identities=0% Similarity=-0.039 Sum_probs=15.3
Q ss_pred hHHHHHHHHHHHHHHHhcccC
Q 011474 388 ELVRLYDLLLQNTADLSDLVS 408 (485)
Q Consensus 388 eivRLyd~ilq~l~ei~eLpg 408 (485)
+...+++..+..+++..++-.
T Consensus 57 ~al~~~~eAi~~le~AL~ldP 77 (158)
T 1zu2_A 57 DAKQMIQEAITKFEEALLIDP 77 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT
T ss_pred hhHhHHHHHHHHHHHHHHhCc
Confidence 344578888888888887754
No 33
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=37.96 E-value=1.3e+02 Score=26.80 Aligned_cols=28 Identities=18% Similarity=0.082 Sum_probs=24.8
Q ss_pred hHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 435 RCFYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 435 Rc~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
..|.+|.+|...|+|.+|+..|.++...
T Consensus 150 ~~~~la~~~~~~g~~~~A~~~~~~~l~~ 177 (261)
T 3qky_A 150 KQYEAARLYERRELYEAAAVTYEAVFDA 177 (261)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 4588999999999999999999998764
No 34
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=37.89 E-value=35 Score=26.46 Aligned_cols=28 Identities=18% Similarity=0.234 Sum_probs=24.6
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSHAE 464 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~~~ 464 (485)
+.+|.+|...|++.+|...|.++.....
T Consensus 57 ~~la~~~~~~g~~~~A~~~~~~al~~~~ 84 (115)
T 2kat_A 57 KWLGKTLQGQGDRAGARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhcc
Confidence 5689999999999999999999987643
No 35
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=37.83 E-value=31 Score=26.82 Aligned_cols=26 Identities=19% Similarity=0.197 Sum_probs=22.9
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++...
T Consensus 23 ~~lg~~~~~~g~~~~A~~~~~~al~~ 48 (115)
T 2kat_A 23 FTLGKTYAEHEQFDAALPHLRAALDF 48 (115)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 45899999999999999999998864
No 36
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=37.07 E-value=26 Score=26.56 Aligned_cols=14 Identities=36% Similarity=0.425 Sum_probs=7.2
Q ss_pred ChhhHHHHHHHHHH
Q 011474 385 KPEELVRLYDLLLQ 398 (485)
Q Consensus 385 k~~eivRLyd~ilq 398 (485)
++.+-+..|+..++
T Consensus 19 ~~~~A~~~~~~al~ 32 (111)
T 2l6j_A 19 LYREAVHCYDQLIT 32 (111)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 45555555555443
No 37
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=36.59 E-value=33 Score=26.82 Aligned_cols=26 Identities=23% Similarity=0.234 Sum_probs=20.4
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++...
T Consensus 43 ~~lg~~~~~~~~~~~A~~~~~~~~~~ 68 (129)
T 2xev_A 43 YWLGESYYATRNFQLAEAQFRDLVSR 68 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 34788888888888888888887764
No 38
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=36.52 E-value=35 Score=25.43 Aligned_cols=26 Identities=12% Similarity=0.025 Sum_probs=22.8
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++...
T Consensus 44 ~~~a~~~~~~~~~~~A~~~~~~a~~~ 69 (112)
T 2kck_A 44 LMKGKALYNLERYEEAVDCYNYVINV 69 (112)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 45899999999999999999998865
No 39
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=36.42 E-value=77 Score=25.48 Aligned_cols=26 Identities=15% Similarity=-0.008 Sum_probs=21.9
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++++.
T Consensus 85 ~~lg~~~~~~~~~~~A~~~~~~al~l 110 (126)
T 4gco_A 85 IRKAACLVAMREWSKAQRAYEDALQV 110 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 45888899999999999999888874
No 40
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=36.39 E-value=57 Score=25.54 Aligned_cols=27 Identities=15% Similarity=0.016 Sum_probs=24.4
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSHA 463 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~~ 463 (485)
+.+|.+|...|+|.+|+..|.++...-
T Consensus 76 ~~lg~~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 76 IRKATAQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHhC
Confidence 448999999999999999999999876
No 41
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=35.64 E-value=72 Score=25.02 Aligned_cols=29 Identities=17% Similarity=0.112 Sum_probs=23.0
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 011474 440 ARSYSLAGKRTEAYALYCRARSHAENALK 468 (485)
Q Consensus 440 A~~y~~~~K~~EAlaL~~ra~~~~~~a~~ 468 (485)
|--.-..|+|.||+.+|..|.+.+-.+..
T Consensus 23 Ave~D~~g~y~eAl~lY~~Aie~ll~alk 51 (86)
T 4a5x_A 23 AVELDSESRYPQALVCYQEGIDLLLQVLK 51 (86)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHh
Confidence 33447789999999999999998877663
No 42
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=35.53 E-value=35 Score=27.43 Aligned_cols=26 Identities=19% Similarity=-0.055 Sum_probs=22.0
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|++.+|+..|.++...
T Consensus 55 ~~lg~~~~~~g~~~~A~~~~~~al~l 80 (121)
T 1hxi_A 55 RSLGLTQAENEKDGLAIIALNHARML 80 (121)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 44888899999999999999988764
No 43
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=35.06 E-value=1.7e+02 Score=23.95 Aligned_cols=27 Identities=22% Similarity=-0.060 Sum_probs=19.2
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSHA 463 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~~ 463 (485)
|.+|.+|...|+|.+|+..|.++...-
T Consensus 101 ~~~g~~~~~~g~~~~A~~~~~~al~l~ 127 (162)
T 3rkv_A 101 FRRAKARIAAWKLDEAEEDLKLLLRNH 127 (162)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcHHHHHHHHHHHHhcC
Confidence 447777777777777777777777653
No 44
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=34.61 E-value=74 Score=25.27 Aligned_cols=32 Identities=16% Similarity=0.093 Sum_probs=23.7
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSHAENALK 468 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~~~~a~~ 468 (485)
+.-|--.-..|+|.||+.+|..+.+.+..+..
T Consensus 19 v~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk 50 (93)
T 1wfd_A 19 LKRAVELDAESRYQQALVCYQEGIDMLLQVLK 50 (93)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 33445556778889999999888888877653
No 45
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=34.49 E-value=48 Score=26.76 Aligned_cols=31 Identities=29% Similarity=0.171 Sum_probs=27.4
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Q 011474 439 LARSYSLAGKRTEAYALYCRARSHAENALKD 469 (485)
Q Consensus 439 lA~~y~~~~K~~EAlaL~~ra~~~~~~a~~~ 469 (485)
-|+.+...|||.||+..+..|..++++|...
T Consensus 21 rAe~ll~~gkydeAIech~kAa~yL~eAmkl 51 (97)
T 2crb_A 21 RADRLLAAGKYEEAISCHRKATTYLSEAMKL 51 (97)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 4677788999999999999999999998754
No 46
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=34.43 E-value=35 Score=28.51 Aligned_cols=26 Identities=23% Similarity=0.100 Sum_probs=23.7
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|++.+|+..|.++...
T Consensus 93 ~~lg~~~~~~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 93 FHAAECLLQXGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 56899999999999999999999875
No 47
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=34.13 E-value=33 Score=28.97 Aligned_cols=26 Identities=23% Similarity=0.266 Sum_probs=23.3
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|++.+|+..|.+|.+.
T Consensus 145 ~~lg~~~~~~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 145 QSIGLAYEGKGLRDEAVKYFKKALEK 170 (184)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhC
Confidence 45899999999999999999999864
No 48
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=33.86 E-value=37 Score=27.71 Aligned_cols=26 Identities=15% Similarity=0.055 Sum_probs=22.8
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++...
T Consensus 56 ~~lg~~~~~~g~~~~A~~~~~~al~~ 81 (142)
T 2xcb_A 56 LGLGACRQSLGLYEQALQSYSYGALM 81 (142)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 34899999999999999999998764
No 49
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=33.70 E-value=49 Score=25.93 Aligned_cols=27 Identities=19% Similarity=-0.093 Sum_probs=22.0
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 436 CFYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 436 c~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
.+.+|.+|...|+|.+|+..|.++...
T Consensus 41 ~~~~a~~~~~~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 41 YSNRAAALAKLMSFPEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 356888888889999998888888764
No 50
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=33.35 E-value=84 Score=27.60 Aligned_cols=65 Identities=18% Similarity=0.127 Sum_probs=47.3
Q ss_pred CCCChhhHHHHHHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCChHHHHHHHHHHHH
Q 011474 382 KVTKPEELVRLYDLLLQNTADLSDLVSSGRERKPEEVKFAEECELKSLAFRAERCFYLARSYSLAGKRTEAYALYCRARS 461 (485)
Q Consensus 382 k~~k~~eivRLyd~ilq~l~ei~eLpg~~~~~v~~d~~l~~~l~a~~~~~~A~Rc~~lA~~y~~~~K~~EAlaL~~ra~~ 461 (485)
++.+++|-+.-|+-.|..+..--++.. ++. ..+++++ |..|.++...|+|.||+.-|++|.+
T Consensus 69 ~Lgr~~eAl~~~~kAL~l~n~~~e~~p-------d~~---------~A~~~~~--~~rG~aL~~lgr~eEAl~~y~kAle 130 (159)
T 2hr2_A 69 GLRSFDEALHSADKALHYFNRRGELNQ-------DEG---------KLWISAV--YSRALALDGLGRGAEAMPEFKKVVE 130 (159)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHCCTTS-------THH---------HHHHHHH--HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhhhccccCCC-------chH---------HHHHHHH--HhHHHHHHHCCCHHHHHHHHHHHHh
Confidence 356899999999999987666655533 111 1333333 3389999999999999999999998
Q ss_pred HHH
Q 011474 462 HAE 464 (485)
Q Consensus 462 ~~~ 464 (485)
...
T Consensus 131 l~p 133 (159)
T 2hr2_A 131 MIE 133 (159)
T ss_dssp HHH
T ss_pred cCC
Confidence 743
No 51
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=33.32 E-value=39 Score=27.38 Aligned_cols=12 Identities=25% Similarity=0.481 Sum_probs=5.3
Q ss_pred HHHHHHHHHHHH
Q 011474 311 FDKIFTAYHEAR 322 (485)
Q Consensus 311 yd~~l~~~~dA~ 322 (485)
|+..+..|+.|+
T Consensus 29 ~~~A~~~~~~al 40 (126)
T 4gco_A 29 YPTAMRHYNEAV 40 (126)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 444444444443
No 52
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=33.22 E-value=1.6e+02 Score=25.73 Aligned_cols=63 Identities=13% Similarity=-0.033 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHh
Q 011474 126 GRLRKAVKWATLFSNLCAIKADPRTSLEAEAYASYMKGNLLFEQDQNWETALKNFKSARAVYEELG 191 (485)
Q Consensus 126 ~RLkKA~~~A~~L~~l~~~~~d~~t~lEa~aY~~~i~G~~~~E~~~~W~~Al~~~~~ar~iy~~La 191 (485)
+++.+|..+-.+.+.++....+..... .+......|.+++..+ +|++|+..|..+-.++....
T Consensus 99 g~~~~A~~~~~~al~~~~~~~~~~~~~--~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~~~~~ 161 (283)
T 3edt_B 99 GKYKEAEPLCKRALEIREKVLGKFHPD--VAKQLNNLALLCQNQG-KAEEVEYYYRRALEIYATRL 161 (283)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHCTTCHH--HHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHHS
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCCChH--HHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHhc
Confidence 345677777777777765432221121 2334456788888887 99999999999887766543
No 53
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=32.62 E-value=86 Score=32.54 Aligned_cols=61 Identities=13% Similarity=-0.011 Sum_probs=42.8
Q ss_pred CChhhHHHHHHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 011474 384 TKPEELVRLYDLLLQNTADLSDLVSSGRERKPEEVKFAEECELKSLAFRAERCFYLARSYSLAGKRTEAYALYCRARSHA 463 (485)
Q Consensus 384 ~k~~eivRLyd~ilq~l~ei~eLpg~~~~~v~~d~~l~~~l~a~~~~~~A~Rc~~lA~~y~~~~K~~EAlaL~~ra~~~~ 463 (485)
.++.+-+.+|...+...+.+. | .+.......+ -. ||.+|...|+|.||..+|.+++...
T Consensus 323 g~~~eA~~l~~~aL~~~~~~l---g------~~Hp~~a~~~----------~n--La~~y~~~g~~~eA~~~~~~aL~i~ 381 (490)
T 3n71_A 323 GLYHEVVKLCRECLEKQEPVF---A------DTNLYVLRLL----------SI--ASEVLSYLQAYEEASHYARRMVDGY 381 (490)
T ss_dssp TCHHHHHHHHHHHHHHHTTTB---C------TTSHHHHHHH----------HH--HHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhc---C------CCCHHHHHHH----------HH--HHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 467888888877776655432 3 2334333222 23 8999999999999999999998875
Q ss_pred HH
Q 011474 464 EN 465 (485)
Q Consensus 464 ~~ 465 (485)
..
T Consensus 382 ~~ 383 (490)
T 3n71_A 382 MK 383 (490)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 54
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=32.50 E-value=39 Score=28.17 Aligned_cols=26 Identities=15% Similarity=0.060 Sum_probs=22.8
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++...
T Consensus 59 ~~lg~~~~~~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 59 LGLGACRQAMGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 35899999999999999999998764
No 55
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=32.38 E-value=39 Score=28.79 Aligned_cols=25 Identities=28% Similarity=0.244 Sum_probs=22.6
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 438 YLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 438 ~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
.+|.+|...|+|.+|+..|.+|...
T Consensus 75 ~lg~~~~~~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 75 GLAAIYQIKEQFQQAADLYAVAFAL 99 (151)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccHHHHHHHHHHHHhh
Confidence 4899999999999999999999764
No 56
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=31.88 E-value=48 Score=25.04 Aligned_cols=24 Identities=29% Similarity=0.379 Sum_probs=13.9
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHH
Q 011474 438 YLARSYSLAGKRTEAYALYCRARS 461 (485)
Q Consensus 438 ~lA~~y~~~~K~~EAlaL~~ra~~ 461 (485)
.+|.+|...|+|.+|+.+|.++..
T Consensus 48 ~la~~~~~~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 48 NLGNAYYKQGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHH
Confidence 355555556666666666655554
No 57
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=31.65 E-value=2.2e+02 Score=23.49 Aligned_cols=26 Identities=23% Similarity=0.330 Sum_probs=23.0
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|+++.+.
T Consensus 111 ~~lg~~~~~~g~~~~A~~~~~~~l~~ 136 (184)
T 3vtx_A 111 YKLGLVYDSMGEHDKAIEAYEKTISI 136 (184)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCchhHHHHHHHHHHh
Confidence 45899999999999999999998764
No 58
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=31.44 E-value=53 Score=26.48 Aligned_cols=27 Identities=19% Similarity=0.033 Sum_probs=23.4
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHHHH
Q 011474 438 YLARSYSLAGKRTEAYALYCRARSHAE 464 (485)
Q Consensus 438 ~lA~~y~~~~K~~EAlaL~~ra~~~~~ 464 (485)
.+|.+|...|+|.+|+..|.+|.+.-.
T Consensus 47 nlg~~~~~~~~~~~A~~~~~~al~~~~ 73 (127)
T 4gcn_A 47 NKAAVYFEEKKFAECVQFCEKAVEVGR 73 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhhhHHHHHHHHHHHHHhCc
Confidence 389999999999999999999987543
No 59
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=30.89 E-value=57 Score=24.89 Aligned_cols=28 Identities=18% Similarity=0.067 Sum_probs=24.2
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSHAE 464 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~~~ 464 (485)
+.+|.+|...|+|.+|+..|.++.....
T Consensus 42 ~~la~~~~~~~~~~~A~~~~~~~~~~~~ 69 (131)
T 1elr_A 42 TNQAAVYFEKGDYNKCRELCEKAIEVGR 69 (131)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhcc
Confidence 4589999999999999999999988654
No 60
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=30.11 E-value=63 Score=24.62 Aligned_cols=27 Identities=15% Similarity=-0.039 Sum_probs=23.3
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 436 CFYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 436 c~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
.+.+|..|...|+|.+|+.+|.++...
T Consensus 7 ~~~l~~~~~~~~~~~~A~~~~~~a~~~ 33 (131)
T 1elr_A 7 EKELGNDAYKKKDFDTALKHYDKAKEL 33 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 456899999999999999999998764
No 61
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=29.90 E-value=75 Score=26.30 Aligned_cols=25 Identities=24% Similarity=0.345 Sum_probs=19.1
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 438 YLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 438 ~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
.+|.+|...|+|.+|+..|.++.+.
T Consensus 70 ~lg~~~~~~~~~~~A~~~~~~al~~ 94 (150)
T 4ga2_A 70 FLGLLYELEENTDKAVECYRRSVEL 94 (150)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCchHHHHHHHHHHHHh
Confidence 3777788888888888888877764
No 62
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=29.52 E-value=1.2e+02 Score=28.01 Aligned_cols=28 Identities=14% Similarity=0.095 Sum_probs=21.4
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSHAE 464 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~~~ 464 (485)
+.+|.+|...|+|.+|+..|++|.+...
T Consensus 200 ~nlg~~y~~~~~y~~A~~~~~~al~~~~ 227 (293)
T 3u3w_A 200 YNHAKALYLDSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 4578888888888888888888877653
No 63
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=29.11 E-value=52 Score=25.59 Aligned_cols=37 Identities=27% Similarity=0.204 Sum_probs=27.9
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH------HHHHHHHHHhc
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH------AENALKDFQRM 473 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~------~~~a~~~~~~~ 473 (485)
+.+|.+|...|++.+|...|.++... +..+...+..+
T Consensus 80 ~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l 122 (129)
T 2xev_A 80 LKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSI 122 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHH
Confidence 45899999999999999999998863 34444444444
No 64
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=29.06 E-value=1.1e+02 Score=23.64 Aligned_cols=29 Identities=31% Similarity=0.248 Sum_probs=22.7
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 011474 440 ARSYSLAGKRTEAYALYCRARSHAENALK 468 (485)
Q Consensus 440 A~~y~~~~K~~EAlaL~~ra~~~~~~a~~ 468 (485)
|--.-..|+|.||+.+|..+.+++-.+..
T Consensus 20 Av~~D~~g~y~eAl~~Y~~aie~l~~a~k 48 (85)
T 2v6x_A 20 AIDLDTATQYEEAYTAYYNGLDYLMLALK 48 (85)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 33456679999999999999998887763
No 65
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=28.94 E-value=39 Score=25.14 Aligned_cols=26 Identities=23% Similarity=0.161 Sum_probs=22.1
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++...
T Consensus 10 ~~~~~~~~~~~~~~~A~~~~~~a~~~ 35 (112)
T 2kck_A 10 YLEGVLQYDAGNYTESIDLFEKAIQL 35 (112)
T ss_dssp GGHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 34888999999999999999988764
No 66
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=28.79 E-value=56 Score=25.16 Aligned_cols=26 Identities=19% Similarity=0.092 Sum_probs=23.1
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++...
T Consensus 88 ~~la~~~~~~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 88 TRKAAALEAMKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 45899999999999999999998875
No 67
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=28.76 E-value=54 Score=25.65 Aligned_cols=26 Identities=19% Similarity=0.093 Sum_probs=23.4
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
.++|.+|...|++.+|+.++.++...
T Consensus 50 ~~L~~~~~~~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 50 DYLSYAVYQQGDLDKALLLTKKLLEL 75 (104)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 56899999999999999999999865
No 68
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=28.50 E-value=55 Score=24.92 Aligned_cols=26 Identities=27% Similarity=0.153 Sum_probs=23.3
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++...
T Consensus 84 ~~~~~~~~~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 84 GRMGLALSSLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 45899999999999999999999875
No 69
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=28.39 E-value=3.8e+02 Score=25.27 Aligned_cols=194 Identities=12% Similarity=0.059 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHhhhhhHhhhhhhcCCCCCCchHHHhhhh
Q 011474 156 AYASYMKGNLLFEQDQNWETALKNFKSARAVYEELGKYGDVENQVLCRERVEELEPSIRYCLHKIGESNVKTSELLQIGE 235 (485)
Q Consensus 156 aY~~~i~G~~~~E~~~~W~~Al~~~~~ar~iy~~La~~~~~~~~~l~~~~v~~i~p~lRycay~l~~~~~~~~~l~~~~~ 235 (485)
.|..+..|.+++..+ +|++|+..|..|-.++..+ .+..... .+-..+-.|-+.+|
T Consensus 103 ~~~~~~~g~~~~~~g-~~~~A~~~~~~al~~~~~~---~~~~~~a-------~~~~~lg~~~~~~~-------------- 157 (383)
T 3ulq_A 103 YYFNFFRGMYELDQR-EYLSAIKFFKKAESKLIFV---KDRIEKA-------EFFFKMSESYYYMK-------------- 157 (383)
T ss_dssp HHHHHHHHHHHHHTT-CHHHHHHHHHHHHTTGGGC---CCHHHHH-------HHHHHHHHHHHHTT--------------
T ss_pred HHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHhhC---CCHHHHH-------HHHHHHHHHHHHcC--------------
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHhhccccEEEEcccccccCCHHHHHHHHHHHHHHHHHhHhhcCCCchhhhHHHHHHHH
Q 011474 236 MEGPALDLFKSKLEAVMAEARSQQAASLTEFHWLGHRFPISNAKTRVAILKAQELEKDLHVKAADSLPAEKKLVIFDKIF 315 (485)
Q Consensus 236 ~~~~~~~~L~~kl~~~~~e~~~~~~~~~~~I~Wrg~~~~i~~~~v~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~yd~~l 315 (485)
..+.-..-+...+.-....... .+.+..++...-.+-..+.+ |++.+
T Consensus 158 ----~~~~A~~~~~~al~~~~~~~~~---------------~~~~~~~~~~lg~~~~~~g~--------------~~~A~ 204 (383)
T 3ulq_A 158 ----QTYFSMDYARQAYEIYKEHEAY---------------NIRLLQCHSLFATNFLDLKQ--------------YEDAI 204 (383)
T ss_dssp ----CHHHHHHHHHHHHHHHHTCSTT---------------HHHHHHHHHHHHHHHHHTTC--------------HHHHH
T ss_pred ----CHHHHHHHHHHHHHHHHhCccc---------------hHHHHHHHHHHHHHHHHhcC--------------HHHHH
Q ss_pred HHHHHHHHHHHHHHHhcCCCcCchhhhhhHHHHHHHHHHHHHHHhhHHHHHHHHhhhccccccccCCCCChhhHHHHHHH
Q 011474 316 TAYHEARGCIRSDLASAGNAENVKDDLFGLDKAVSAVLGQRTIERNQLLVSIVKGKLTKQRDDKTGKVTKPEELVRLYDL 395 (485)
Q Consensus 316 ~~~~dA~~~~r~~l~~~~~~~~~~~~l~~l~~yl~~~~l~~tIeRnl~li~~l~~~~~~~~~~~~~k~~k~~eivRLyd~ 395 (485)
..+..|++..+..- +.......|..--.++. ...++.+-+..|..
T Consensus 205 ~~~~~al~~~~~~~----------~~~~~~~~~~~lg~~y~-------------------------~~g~~~~A~~~~~~ 249 (383)
T 3ulq_A 205 SHFQKAYSMAEAEK----------QPQLMGRTLYNIGLCKN-------------------------SQSQYEDAIPYFKR 249 (383)
T ss_dssp HHHHHHHHHHHHTT----------CHHHHHHHHHHHHHHHH-------------------------HTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC----------ChHHHHHHHHHHHHHHH-------------------------HCCCHHHHHHHHHH
Q ss_pred HHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 011474 396 LLQNTADLSDLVSSGRERKPEEVKFAEECELKSLAFRAERCFYLARSYSLAGKRTEAYALYCRARSHAEN 465 (485)
Q Consensus 396 ilq~l~ei~eLpg~~~~~v~~d~~l~~~l~a~~~~~~A~Rc~~lA~~y~~~~K~~EAlaL~~ra~~~~~~ 465 (485)
.++......+.|+ ...++.. +|.+|...|++.+|+..|.++......
T Consensus 250 al~~~~~~~~~~~---------------------~~~~~~~--l~~~~~~~g~~~~A~~~~~~al~~~~~ 296 (383)
T 3ulq_A 250 AIAVFEESNILPS---------------------LPQAYFL--ITQIHYKLGKIDKAHEYHSKGMAYSQK 296 (383)
T ss_dssp HHHHHHHTTCGGG---------------------HHHHHHH--HHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccchh---------------------HHHHHHH--HHHHHHHCCCHHHHHHHHHHHHHHHHH
No 70
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=28.31 E-value=96 Score=25.82 Aligned_cols=26 Identities=27% Similarity=0.207 Sum_probs=16.9
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHHH
Q 011474 442 SYSLAGKRTEAYALYCRARSHAENAL 467 (485)
Q Consensus 442 ~y~~~~K~~EAlaL~~ra~~~~~~a~ 467 (485)
-.-..|+|.||+.||..|.+++-.+.
T Consensus 27 e~D~ag~y~eAl~lY~~Aie~l~~al 52 (117)
T 2cpt_A 27 QEDKAGNYEEALQLYQHAVQYFLHVV 52 (117)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 33455777777777777777666554
No 71
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=28.09 E-value=52 Score=27.30 Aligned_cols=21 Identities=14% Similarity=0.235 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 011474 309 VIFDKIFTAYHEARGCIRSDL 329 (485)
Q Consensus 309 ~~yd~~l~~~~dA~~~~r~~l 329 (485)
..|+..+..|..|+.......
T Consensus 25 ~~~~~A~~~y~~al~~~~~~~ 45 (162)
T 3rkv_A 25 KDYKEAIDAYRDALTRLDTLI 45 (162)
T ss_dssp TCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhc
Confidence 347777888888887766544
No 72
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=27.28 E-value=64 Score=24.26 Aligned_cols=26 Identities=27% Similarity=0.391 Sum_probs=22.7
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|++.+|+..|.++...
T Consensus 81 ~~la~~~~~~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 81 YNLGNAYYKQGDYDEAIEYYQKALEL 106 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 46889999999999999999988765
No 73
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=27.07 E-value=59 Score=24.14 Aligned_cols=26 Identities=8% Similarity=-0.061 Sum_probs=20.7
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+-.|..|...|+|.+|+..|.++.+.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~ 29 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQT 29 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 45778888888999998888887653
No 74
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=26.98 E-value=59 Score=24.25 Aligned_cols=25 Identities=20% Similarity=0.328 Sum_probs=17.0
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 438 YLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 438 ~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
.+|.+|...|+|.+|+..|.++...
T Consensus 43 ~~a~~~~~~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 43 NRSAAYAKKGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHh
Confidence 3666677777777777777776653
No 75
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=26.71 E-value=62 Score=24.56 Aligned_cols=25 Identities=28% Similarity=0.339 Sum_probs=17.1
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 438 YLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 438 ~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
.+|.+|...|++.+|+.+|.++...
T Consensus 40 ~~a~~~~~~~~~~~A~~~~~~~~~~ 64 (136)
T 2fo7_A 40 NLGNAYYKQGDYDEAIEYYQKALEL 64 (136)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 3566677777777777777776653
No 76
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=26.52 E-value=57 Score=27.08 Aligned_cols=26 Identities=12% Similarity=-0.098 Sum_probs=22.7
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++...
T Consensus 83 ~~lg~~~~~~g~~~~A~~~~~~al~~ 108 (164)
T 3sz7_A 83 SRLGLARFDMADYKGAKEAYEKGIEA 108 (164)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 45899999999999999999988764
No 77
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=26.33 E-value=55 Score=25.23 Aligned_cols=26 Identities=12% Similarity=-0.207 Sum_probs=22.5
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++...
T Consensus 54 ~~la~~~~~~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 54 SNRAACYTKLLEFQLALKDCEECIQL 79 (133)
T ss_dssp HHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 45889999999999999999988764
No 78
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=26.20 E-value=84 Score=23.30 Aligned_cols=27 Identities=15% Similarity=0.001 Sum_probs=22.4
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 436 CFYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 436 c~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
.+.+|..|...|+|.+|+.+|.++...
T Consensus 7 ~~~~~~~~~~~~~~~~A~~~~~~~~~~ 33 (118)
T 1elw_A 7 LKEKGNKALSVGNIDDALQCYSEAIKL 33 (118)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 455888888999999999999988764
No 79
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=26.07 E-value=75 Score=24.89 Aligned_cols=29 Identities=31% Similarity=0.241 Sum_probs=25.2
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSHAEN 465 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~~~~ 465 (485)
+.+|.+|...|+|.+|+..|.++......
T Consensus 81 ~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 81 FFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 44899999999999999999999887654
No 80
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=25.76 E-value=76 Score=26.27 Aligned_cols=26 Identities=23% Similarity=0.056 Sum_probs=22.0
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++...
T Consensus 49 ~~l~~~~~~~g~~~~A~~~~~~al~~ 74 (164)
T 3sz7_A 49 SNRAAAYSASGQHEKAAEDAELATVV 74 (164)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 56888888899999999998888775
No 81
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=25.48 E-value=71 Score=24.22 Aligned_cols=26 Identities=27% Similarity=0.089 Sum_probs=22.4
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++...
T Consensus 50 ~~~a~~~~~~~~~~~A~~~~~~~~~~ 75 (131)
T 2vyi_A 50 CNRAAAYSKLGNYAGAVQDCERAICI 75 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhchHHHHHHHHHHHhc
Confidence 45888999999999999999988764
No 82
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.42 E-value=1.7e+02 Score=24.47 Aligned_cols=43 Identities=14% Similarity=0.100 Sum_probs=32.4
Q ss_pred HHHHHHHHhhHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 011474 426 LKSLAFRAERCFYLARSYSLAGKRTEAYALYCRARSHAENALK 468 (485)
Q Consensus 426 a~~~~~~A~Rc~~lA~~y~~~~K~~EAlaL~~ra~~~~~~a~~ 468 (485)
.+..|=+||+|..-|...-..|+-.+|+.||.+...++..+..
T Consensus 15 ik~~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~ 57 (116)
T 2dl1_A 15 IREAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGIS 57 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhcc
Confidence 3456777888866677777778888888888888888877653
No 83
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=25.27 E-value=66 Score=25.26 Aligned_cols=23 Identities=30% Similarity=0.229 Sum_probs=12.1
Q ss_pred HHHHHHhcCChHHHHHHHHHHHH
Q 011474 439 LARSYSLAGKRTEAYALYCRARS 461 (485)
Q Consensus 439 lA~~y~~~~K~~EAlaL~~ra~~ 461 (485)
+|..|...|+|.+|+..|.++..
T Consensus 15 ~g~~~~~~~~~~~A~~~~~~al~ 37 (137)
T 3q49_B 15 QGNRLFVGRKYPEAAACYGRAIT 37 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCcHHHHHHHHHHHHh
Confidence 45555555555555555555544
No 84
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.60 E-value=65 Score=25.42 Aligned_cols=26 Identities=15% Similarity=0.101 Sum_probs=23.1
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++...
T Consensus 103 ~~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 103 YRRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 45888999999999999999999875
No 85
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=24.35 E-value=70 Score=25.48 Aligned_cols=27 Identities=11% Similarity=-0.130 Sum_probs=22.9
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 436 CFYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 436 c~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
.|.+|..+...|+|.+|+..|.++.+.
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~ 46 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQK 46 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 456888899999999999999998864
No 86
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=24.30 E-value=2.6e+02 Score=24.32 Aligned_cols=26 Identities=12% Similarity=0.068 Sum_probs=22.5
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|..|...|+|.+|+..|+++.+.
T Consensus 151 ~~~a~~~~~~~~~~~A~~~~~~~l~~ 176 (225)
T 2yhc_A 151 YSVAEYYTERGAWVAVVNRVEGMLRD 176 (225)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 67889999999999999999988765
No 87
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.17 E-value=75 Score=25.03 Aligned_cols=26 Identities=12% Similarity=-0.183 Sum_probs=22.5
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++...
T Consensus 69 ~~~a~~~~~~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 69 RNRAACHLKLEDYDKAETEASKAIEK 94 (148)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 45888999999999999999988764
No 88
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=24.07 E-value=59 Score=25.35 Aligned_cols=25 Identities=12% Similarity=-0.010 Sum_probs=22.5
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARS 461 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~ 461 (485)
+.+|..|...|+|.+|+..+.+++.
T Consensus 47 ~~lg~~~~~~g~y~~Ai~~w~~~l~ 71 (93)
T 3bee_A 47 SLIANDHFISFRFQEAIDTWVLLLD 71 (93)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 4589999999999999999999874
No 89
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=23.76 E-value=2.3e+02 Score=26.06 Aligned_cols=28 Identities=11% Similarity=0.006 Sum_probs=24.4
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSHAE 464 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~~~ 464 (485)
..+|.+|...|+|.+|+..|.+|.....
T Consensus 81 ~~lg~~~~~~g~~~~A~~~~~~Al~l~~ 108 (292)
T 1qqe_A 81 VEAYKCFKSGGNSVNAVDSLENAIQIFT 108 (292)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 3489999999999999999999988754
No 90
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=23.73 E-value=86 Score=27.52 Aligned_cols=32 Identities=16% Similarity=0.248 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Q 011474 154 AEAYASYMKGNLLFEQDQNWETALKNFKSARAV 186 (485)
Q Consensus 154 a~aY~~~i~G~~~~E~~~~W~~Al~~~~~ar~i 186 (485)
++||...-.|..+|..+ +|++|+.+|..|-.+
T Consensus 9 ~~a~~~~~~G~~l~~~g-~~eeAi~~Y~kAL~l 40 (159)
T 2hr2_A 9 VGAYLALSDAQRQLVAG-EYDEAAANCRRAMEI 40 (159)
T ss_dssp HHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHhh
Confidence 47899999999999998 999999999988555
No 91
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=23.65 E-value=2.2e+02 Score=27.32 Aligned_cols=60 Identities=7% Similarity=0.121 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHH
Q 011474 126 GRLRKAVKWATLFSNLCAIKADPRTSLEAEAYASYMKGNLLFEQDQNWETALKNFKSARAVYEEL 190 (485)
Q Consensus 126 ~RLkKA~~~A~~L~~l~~~~~d~~t~lEa~aY~~~i~G~~~~E~~~~W~~Al~~~~~ar~iy~~L 190 (485)
++..+|...-..+...+....|....+|+ -...|.+++..+ +|++|...+..|..+...+
T Consensus 149 g~~~~A~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~A~~~~~~al~~~~~~ 208 (434)
T 4b4t_Q 149 KQYKDSLALINDLLREFKKLDDKPSLVDV----HLLESKVYHKLR-NLAKSKASLTAARTAANSI 208 (434)
T ss_dssp TCHHHHHHHHHHHHHHHTTSSCSTHHHHH----HHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHS
T ss_pred cChHHHHHHHHHHHHHHHhcccchhHHHH----HHHHHHHHHHhC-cHHHHHHHHHHHHHHhhcC
Confidence 45567888888888888776666665543 346778888887 9999999999998887654
No 92
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=23.44 E-value=1.7e+02 Score=26.76 Aligned_cols=61 Identities=13% Similarity=0.113 Sum_probs=0.0
Q ss_pred CCChhhHHHHHHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 383 VTKPEELVRLYDLLLQNTADLSDLVSSGRERKPEEVKFAEECELKSLAFRAERCFYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 383 ~~k~~eivRLyd~ilq~l~ei~eLpg~~~~~v~~d~~l~~~l~a~~~~~~A~Rc~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
..++.+-+..|+..++..+...+.+. ....++-. +|.+|...|+|.+|+..|++|...
T Consensus 168 ~~~~~~A~~~~~kal~~~~~~~~~~~--------------------~~~~~~~n--lg~~y~~~~~y~~Al~~~~kal~~ 225 (293)
T 2qfc_A 168 NGYLKKGIDLFEQILKQLEALHDNEE--------------------FDVKVRYN--HAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSCCCHH--------------------HHHHHHHH--HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhcCcccc--------------------chHHHHHh--HHHHHHHHhhHHHHHHHHHHHHHH
Q ss_pred HHH
Q 011474 463 AEN 465 (485)
Q Consensus 463 ~~~ 465 (485)
...
T Consensus 226 ~~~ 228 (293)
T 2qfc_A 226 SCR 228 (293)
T ss_dssp HHH
T ss_pred HHh
No 93
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=23.39 E-value=1.4e+02 Score=25.45 Aligned_cols=26 Identities=23% Similarity=0.101 Sum_probs=17.4
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++...
T Consensus 126 ~~lg~~~~~~~~~~~A~~~~~~al~~ 151 (198)
T 2fbn_A 126 YKLGVANMYFGFLEEAKENLYKAASL 151 (198)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 45666777777777777777766654
No 94
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=22.81 E-value=80 Score=25.44 Aligned_cols=26 Identities=23% Similarity=0.065 Sum_probs=19.6
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++...
T Consensus 85 ~~~a~~~~~~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 85 YRRAASNMALGKFRAALRDYETVVKV 110 (166)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 34777788888888888888877654
No 95
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=22.49 E-value=66 Score=32.70 Aligned_cols=27 Identities=15% Similarity=-0.097 Sum_probs=24.0
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHH
Q 011474 439 LARSYSLAGKRTEAYALYCRARSHAEN 465 (485)
Q Consensus 439 lA~~y~~~~K~~EAlaL~~ra~~~~~~ 465 (485)
||.+|...|+|.||+.+|.+++.....
T Consensus 335 L~~~y~~~g~~~eA~~~~~~~L~i~~~ 361 (429)
T 3qwp_A 335 AMDACINLGLLEEALFYGTRTMEPYRI 361 (429)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccHHHHHHHHHHHHHhHHH
Confidence 888999999999999999999887654
No 96
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=22.32 E-value=3.3e+02 Score=26.04 Aligned_cols=26 Identities=15% Similarity=0.024 Sum_probs=15.6
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|++.+|+..|.++...
T Consensus 181 ~~l~~~~~~~g~~~~A~~~~~~~~~~ 206 (450)
T 2y4t_A 181 ELRAECFIKEGEPRKAISDLKAASKL 206 (450)
T ss_dssp HHHHHHHHHTTCGGGGHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 34566666666666666666666543
No 97
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=22.08 E-value=1.5e+02 Score=28.34 Aligned_cols=26 Identities=8% Similarity=-0.187 Sum_probs=14.8
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++.+.
T Consensus 234 ~~lg~~~~~~g~~~~A~~~~~~al~l 259 (336)
T 1p5q_A 234 SRRGEAHLAVNDFELARADFQKVLQL 259 (336)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 34555566666666666666655543
No 98
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=21.76 E-value=87 Score=25.22 Aligned_cols=26 Identities=15% Similarity=-0.185 Sum_probs=22.4
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++...
T Consensus 51 ~~~a~~~~~~~~~~~A~~~~~~a~~~ 76 (166)
T 1a17_A 51 GNRSLAYLRTECYGYALGDATRAIEL 76 (166)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 45888999999999999999998864
No 99
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=21.54 E-value=85 Score=26.15 Aligned_cols=26 Identities=15% Similarity=0.147 Sum_probs=17.1
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++.+.
T Consensus 48 ~~lg~~~~~~~~~~~A~~~~~~al~~ 73 (177)
T 2e2e_A 48 ALLGEYYLWQNDYSNSLLAYRQALQL 73 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 33666677777777777777766653
No 100
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=21.51 E-value=2.3e+02 Score=23.72 Aligned_cols=28 Identities=29% Similarity=0.249 Sum_probs=23.7
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 011474 436 CFYLARSYSLAGKRTEAYALYCRARSHA 463 (485)
Q Consensus 436 c~~lA~~y~~~~K~~EAlaL~~ra~~~~ 463 (485)
.+.+|.+|...|+|.+|+..|.++....
T Consensus 150 ~~~la~~~~~~~~~~~A~~~~~~~~~~~ 177 (225)
T 2vq2_A 150 FKELARTKMLAGQLGDADYYFKKYQSRV 177 (225)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 3568999999999999999999988754
No 101
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=21.36 E-value=82 Score=27.53 Aligned_cols=27 Identities=19% Similarity=0.082 Sum_probs=24.6
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 436 CFYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 436 c~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
.|+||-.|...|.|.+|+..++++++.
T Consensus 74 lY~LAv~~~kl~~Y~~A~~y~~~lL~i 100 (152)
T 1pc2_A 74 VFYLAVGNYRLKEYEKALKYVRGLLQT 100 (152)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 488999999999999999999999874
No 102
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=21.31 E-value=95 Score=23.41 Aligned_cols=25 Identities=28% Similarity=0.339 Sum_probs=19.4
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 438 YLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 438 ~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
.+|.+|...|+|.+|+.+|.++...
T Consensus 74 ~l~~~~~~~~~~~~A~~~~~~~~~~ 98 (136)
T 2fo7_A 74 NLGNAYYKQGDYDEAIEYYQKALEL 98 (136)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 4677788888888888888877653
No 103
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=20.99 E-value=2e+02 Score=24.42 Aligned_cols=59 Identities=5% Similarity=0.001 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHhhcCChhh------HHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Q 011474 127 RLRKAVKWATLFSNLCAIKADPRT------SLEAEAYASYMKGNLLFEQDQNWETALKNFKSARAV 186 (485)
Q Consensus 127 RLkKA~~~A~~L~~l~~~~~d~~t------~lEa~aY~~~i~G~~~~E~~~~W~~Al~~~~~ar~i 186 (485)
++.+|+.+-.+.+.++....+... .-+..+...+..|.+++..+ +|++|+..|..+-.+
T Consensus 53 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~~~~A~~~~~~al~~ 117 (198)
T 2fbn_A 53 EINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNK-DYPKAIDHASKVLKI 117 (198)
T ss_dssp CHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHh
Confidence 344666666665555433221111 11122344556788888887 999999999887554
No 104
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=20.95 E-value=85 Score=27.47 Aligned_cols=26 Identities=15% Similarity=0.101 Sum_probs=17.9
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHH
Q 011474 437 FYLARSYSLAGKRTEAYALYCRARSH 462 (485)
Q Consensus 437 ~~lA~~y~~~~K~~EAlaL~~ra~~~ 462 (485)
+.+|.+|...|+|.+|+..|.++.+.
T Consensus 92 ~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (208)
T 3urz_A 92 EACAEMQVCRGQEKDALRMYEKILQL 117 (208)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 34667777777777777777777663
No 105
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=20.59 E-value=4.1e+02 Score=28.80 Aligned_cols=29 Identities=14% Similarity=0.029 Sum_probs=19.9
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHHHHHH
Q 011474 438 YLARSYSLAGKRTEAYALYCRARSHAENA 466 (485)
Q Consensus 438 ~lA~~y~~~~K~~EAlaL~~ra~~~~~~a 466 (485)
.+|.+|...|+|.+|...|.++.+.....
T Consensus 150 ~L~~~l~~~g~~~~A~~~~~kal~l~~~~ 178 (723)
T 4gyw_A 150 NLAHCLQIVCDWTDYDERMKKLVSIVADQ 178 (723)
T ss_dssp HHHHHHHHTTCCTTHHHHHHHHHHHHHHH
T ss_pred hhhhHHHhcccHHHHHHHHHHHHHhChhH
Confidence 46777777777777777777776665543
Done!