BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>011475
MGSRFPSHQLSNGLYVSGRPEQPKERTPTMSSVAMPYTGGDIKKSGELGKMFDIPVDGSK
SRKSGPINNAPSRTGSFGGAASHSGPIMPNAASRASYSTSGPVSSGVTSGSASLKKSNSG
PLNKHGEPLKKSSGPQSGGVTPSGRQNSGPLAPALPTTGLITSGPISSAPLNSSGAPRKV
SGPLDSMGSMKIPSSVPHNQAITVLSQDEDFDFKRNFPKPIFWSLILLFVMGFIAGGFIL
GAVHNAILLIVVVVLFSCVAALFGWNTFWGRKAIISYIARYPDAELRNAKNGQFVKISGV
VTCGNVPLESSFQKVPRCIYTSTSLYEYRGWGSKAANPTHRRFTWGLRSLERRAVDFYIS
DFQSGLRALVKTGYGARVTPYVDDSLAIDVNPGKEELSPEFIRWLAERNLSSDDRIMRLK
EGYIKEGSTVSVMGVVQRNDNVLMIVPPPEPITTGCQWAKCIVPASLDGIVLRCEDASKN
DVIPV

High Scoring Gene Products

Symbol, full name Information P value
AT1G16860 protein from Arabidopsis thaliana 2.2e-185
AT1G78880 protein from Arabidopsis thaliana 1.4e-151
AT4G22290 protein from Arabidopsis thaliana 2.7e-93

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  011475
        (485 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2015646 - symbol:AT1G16860 species:3702 "Arabi...  1798  2.2e-185  1
TAIR|locus:2037533 - symbol:AT1G78880 "AT1G78880" species...  1479  1.4e-151  1
TAIR|locus:2132075 - symbol:AT4G22290 "AT4G22290" species...   929  2.7e-93   1


>TAIR|locus:2015646 [details] [associations]
            symbol:AT1G16860 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=IDA] GO:GO:0016021
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 EMBL:AC051629
            EMBL:AY050887 EMBL:AY117261 EMBL:BT000665 IPI:IPI00537841
            PIR:H86303 RefSeq:NP_564009.1 UniGene:At.21790 PaxDb:Q9FZ45
            PRIDE:Q9FZ45 EnsemblPlants:AT1G16860.1 GeneID:838257
            KEGG:ath:AT1G16860 TAIR:At1g16860 eggNOG:NOG257904
            HOGENOM:HOG000242640 InParanoid:Q9FZ45 OMA:MIVPSSE PhylomeDB:Q9FZ45
            ProtClustDB:CLSN2679796 Genevestigator:Q9FZ45 Uniprot:Q9FZ45
        Length = 474

 Score = 1798 (638.0 bits), Expect = 2.2e-185, P = 2.2e-185
 Identities = 345/487 (70%), Positives = 394/487 (80%)

Query:     1 MGSRFPSHQLSNGLYVSGRPEQPKERTPTMSSVAMPYTGGDIKKSGELGKMFDIPVDGSK 60
             MGSR+PSHQLSNGL+VSGRPEQPKER PTMS+VAMPYTGGDIK+SGELGKMFDIP DG+K
Sbjct:     1 MGSRYPSHQLSNGLFVSGRPEQPKERAPTMSAVAMPYTGGDIKRSGELGKMFDIPADGTK 60

Query:    61 SRKSGPINNAPSRTGSFGGAASHSGPIMPNAASRXXXXXXXXXXXXXXXXXXXLKKSNSG 120
             SRKSGPI  APSR+GSF G A  SGP  P A  R                   +KK+NSG
Sbjct:    61 SRKSGPIPGAPSRSGSFAGTAQ-SGPGAPMATGRMSGSLASAGSVS-------MKKTNSG 112

Query:   121 PLNKHGEPLKKSSGPQSGGVTPSGRQNSGPLAPALPTTGLITSGPISSAPLNSSGAPRKV 180
             PL+KHGEPLKKSSGPQSGGVT   RQNSG + P LP TGLITSGPI+S PLNSSGAPRKV
Sbjct:   113 PLSKHGEPLKKSSGPQSGGVT---RQNSGSI-PILPATGLITSGPITSGPLNSSGAPRKV 168

Query:   181 SGPLDSMGSMK--IPSSVPHNQAITVLSQDEDFDFKRNFPKPIFWSLILLFVMGFIAGGF 238
             SGPLDS G MK  +P+ V HNQA+T L  ++DF   ++FPKP+ W ++L+F+MGF+AGGF
Sbjct:   169 SGPLDSSGLMKSHMPTVV-HNQAVTTLGPEDDFSCLKSFPKPVLWLVVLIFIMGFLAGGF 227

Query:   239 ILGAVHNAILLIVVVVLFSCVAALFGWNTFWGRKAIISYIARYPDAELRNAKNGQFVKIS 298
             ILGAVHN ILL+VV +LF+ VAALF WN  WGR+ I  +IARYPDA+LR AKNGQ VK++
Sbjct:   228 ILGAVHNPILLVVVAILFTVVAALFIWNICWGRRGITDFIARYPDADLRTAKNGQHVKVT 287

Query:   299 GVVTCGNVPLESSFQKVPRCIYTSTSLYEYRGWGSKAANPTHRRFTWGLRSLERRAVDFY 358
             GVVTCGNVPLESSF +VPRC+YTST LYEYRGWGSK AN +HR FTWGLRS ER  VDFY
Sbjct:   288 GVVTCGNVPLESSFHRVPRCVYTSTCLYEYRGWGSKPANSSHRHFTWGLRSSERHVVDFY 347

Query:   359 ISDFQSGLRALVKTGYGARVTPYVDDSLAIDVNPGKEELSPEFIRWLAERNLSSDDRIMR 418
             ISDFQSGLRALVKTG GA+VTP VDDS+ ID   G E++SP+F+RWL ++NL+SDDRIMR
Sbjct:   348 ISDFQSGLRALVKTGSGAKVTPLVDDSVVIDFKQGSEQVSPDFVRWLGKKNLTSDDRIMR 407

Query:   419 LKEGYIKEGSTVSVMGVVQRNDNVLMIVPPPEPITTGCQWAKCIVPASLDGIVLRCEDAS 478
             LKEGYIKEGSTVSV+GVVQRNDNVLMIVP  EP+  G QW +C  P SL+GIVLRCED+S
Sbjct:   408 LKEGYIKEGSTVSVIGVVQRNDNVLMIVPSSEPLAAGWQWRRCTFPTSLEGIVLRCEDSS 467

Query:   479 KNDVIPV 485
               D IPV
Sbjct:   468 NVDAIPV 474


>TAIR|locus:2037533 [details] [associations]
            symbol:AT1G78880 "AT1G78880" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
            GO:GO:0006508 GO:GO:0008233 EMBL:AC005679 HOGENOM:HOG000242640
            ProtClustDB:CLSN2679796 EMBL:AY072176 EMBL:AY096686 EMBL:AY120734
            EMBL:BT000364 IPI:IPI00537430 PIR:C96818 RefSeq:NP_178009.1
            UniGene:At.21193 PaxDb:Q9ZVA7 PRIDE:Q9ZVA7
            EnsemblPlants:AT1G78880.1 GeneID:844225 KEGG:ath:AT1G78880
            TAIR:At1g78880 eggNOG:NOG292696 InParanoid:Q9ZVA7 OMA:WNISCER
            PhylomeDB:Q9ZVA7 ArrayExpress:Q9ZVA7 Genevestigator:Q9ZVA7
            Uniprot:Q9ZVA7
        Length = 468

 Score = 1479 (525.7 bits), Expect = 1.4e-151, P = 1.4e-151
 Identities = 295/447 (65%), Positives = 342/447 (76%)

Query:    54 IPVDGSKSRKSG--------PINNAPSR-----TGSFGGAASHSGPIMPNAASRXXXXXX 100
             +P  G   +KSG        P +   SR     TG    + + SGP+ PNA  R      
Sbjct:    35 MPYTGGDIKKSGELGKMFDIPTDGTKSRKSGPITGGSSRSGAQSGPV-PNATGRMSGNLA 93

Query:   101 XXXXXXXXXXXXXLKKSNSGPLNKHGEPLKKSSGPQSGGVTPSGRQNSGPLAPALPTTGL 160
                          +KK+NSGPL+KHGEPLKKSSGPQSGGVT   RQNSGP+ P LPTTGL
Sbjct:    94 SAGSNS-------MKKTNSGPLSKHGEPLKKSSGPQSGGVT---RQNSGPI-PILPTTGL 142

Query:   161 ITSGPISSAPLNSSGAPRKVSGPLDSMGSMK--IPSSVPHNQAITVLSQDEDFDFKRNFP 218
             ITSGPI+S PLNSSGAPRK+SGPLD  GSMK  +PS V HNQA+T L+ ++DF   ++FP
Sbjct:   143 ITSGPITSGPLNSSGAPRKISGPLDYSGSMKTHMPSVV-HNQAVTTLAPEDDFSCMKSFP 201

Query:   219 KPIFWSLILLFVMGFIAGGFILGAVHNAILLIVVVVLFSCVAALFGWNTFWGRKAIISYI 278
             KP+ W +IL+FVMGF+AGGFILGAVHNAILLIVV VLF+ VAALF WN    R+ I  +I
Sbjct:   202 KPVLWLVILIFVMGFLAGGFILGAVHNAILLIVVAVLFTVVAALFIWNISCERRGITDFI 261

Query:   279 ARYPDAELRNAKNGQFVKISGVVTCGNVPLESSFQKVPRCIYTSTSLYEYRGWGSKAANP 338
             ARYPDA+LR AKNGQ+VK++GVVTCGNVPLESSF +VPRC+YTST LYEYRGWGSK AN 
Sbjct:   262 ARYPDADLRTAKNGQYVKVTGVVTCGNVPLESSFHRVPRCVYTSTCLYEYRGWGSKPANA 321

Query:   339 THRRFTWGLRSLERRAVDFYISDFQSGLRALVKTGYGARVTPYVDDSLAIDVNPGKEELS 398
             +HRRFTWGLRS ER  VDFYISDFQSGLRALVKTG GA+VTP VDDS+ ID  PG E+ S
Sbjct:   322 SHRRFTWGLRSAERHVVDFYISDFQSGLRALVKTGNGAKVTPLVDDSVVIDFKPGNEQAS 381

Query:   399 PEFIRWLAERNLSSDDRIMRLKEGYIKEGSTVSVMGVVQRNDNVLMIVPPPEPITTGCQW 458
             P+F+RWL ++NL++DDRIMRLKEGYIKEGSTVSV+GVVQRNDNVLMIVP  EP+  G QW
Sbjct:   382 PDFVRWLGKKNLTNDDRIMRLKEGYIKEGSTVSVIGVVQRNDNVLMIVPTTEPLAAGWQW 441

Query:   459 AKCIVPASLDGIVLRCEDASKNDVIPV 485
             +KC  PASL+GIVLRCED+S  D IPV
Sbjct:   442 SKCTFPASLEGIVLRCEDSSNVDAIPV 468

 Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
 Identities = 129/268 (48%), Positives = 160/268 (59%)

Query:     1 MGSRFPSHQLSNGLYVSGRPEQPKERTPTMSSVAMPYTGGDIKKSGELGKMFDIPVDGSK 60
             MGSR+ SHQLSNGL+VSGRPEQPKE+ PTMSSVAMPYTGGDIKKSGELGKMFDIP DG+K
Sbjct:     1 MGSRYASHQLSNGLFVSGRPEQPKEKPPTMSSVAMPYTGGDIKKSGELGKMFDIPTDGTK 60

Query:    61 SRKSGPINNAPSRTGSFGGAASHSGPIMPNAASRXXXXXXXXXXXXXXXXXXXLKKSNSG 120
             SRKSGPI    SR+G+       SGP+ PNA  R                   +KK+NSG
Sbjct:    61 SRKSGPITGGSSRSGA------QSGPV-PNATGRMSGNLASAGSNS-------MKKTNSG 106

Query:   121 PLNKHGEPLKKSSGPQSGGVTPSGRQNSGPLAPA--LPTTGLITSGPISS--APLNSSGA 176
             PL+KHGEPLKKSSGPQSGGVT        P+ P   L T+G ITSGP++S  AP   SG 
Sbjct:   107 PLSKHGEPLKKSSGPQSGGVTRQN-SGPIPILPTTGLITSGPITSGPLNSSGAPRKISG- 164

Query:   177 PRKVSGPLDSMGSMKIPSSVPHNQAITVLSQDEDFDFKRNFPKPIFWSLILL-------- 228
             P   SG + +     +PS V +    T+  +D+    K      ++  +++         
Sbjct:   165 PLDYSGSMKT----HMPSVVHNQAVTTLAPEDDFSCMKSFPKPVLWLVILIFVMGFLAGG 220

Query:   229 FVMGFIAGGFILGAVHNAILLIVVVVLF 256
             F++G +    +L  V  A+L  VV  LF
Sbjct:   221 FILGAVHNAILLIVV--AVLFTVVAALF 246


>TAIR|locus:2132075 [details] [associations]
            symbol:AT4G22290 "AT4G22290" species:3702 "Arabidopsis
            thaliana" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=ISS] EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0006508 GO:GO:0008233 UniGene:At.47267 HOGENOM:HOG000242640
            ProtClustDB:CLSN2679796 EMBL:AY140104 EMBL:BT006592 IPI:IPI00534218
            RefSeq:NP_193960.2 UniGene:At.71029 PRIDE:Q8L6X7
            EnsemblPlants:AT4G22290.1 GeneID:828324 KEGG:ath:AT4G22290
            TAIR:At4g22290 InParanoid:Q8L6X7 OMA:AGRIQSH PhylomeDB:Q8L6X7
            Genevestigator:Q8L6X7 Uniprot:Q8L6X7
        Length = 445

 Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
 Identities = 183/356 (51%), Positives = 249/356 (69%)

Query:   133 SGPQSGGVTPSGRQNSGPLAPALPTTGLITSGPI-SSAPLNSSGAPRKVSGPLDSMGSMK 191
             SGP SG V    ++ SGPL+   PT GLITSG + SS P+  SG+ R  SG LD   S  
Sbjct:   101 SGPNSGSV----KKFSGPLSQLQPT-GLITSGSLGSSGPI-LSGSRR--SGQLDHQLS-N 151

Query:   192 IPSSVP-HNQAITVLSQDE-DFDFKRNFPKPIFWSLILLFVMGFIAGGFILGAVHNAILL 249
             + SS P +  ++T L+ D     FK   PK + W+++++  MG + G F+  AV   +++
Sbjct:   152 LASSKPKYGSSVTSLNVDPVRVGFK--VPKAMVWAVLIVAAMGLLVGAFLTVAVKKPVVI 209

Query:   250 IVVVVLFSCVAALFGWNTFWGRKAIISYIARYPDAELRNAKNGQFVKISGVVTCGNVPLE 309
               V+        +  WN  W RK ++S+I +YPDAELR A +GQFVK++GVVTCG++PLE
Sbjct:   210 AAVLAAVCPAIVVLVWNCVWRRKGLLSFIKKYPDAELRGAIDGQFVKVTGVVTCGSIPLE 269

Query:   310 SSFQKVPRCIYTSTSLYEYRGWGSKAANPTHRRFTWGLRSLERRAVDFYISDFQSGLRAL 369
             SSFQ+ PRC+Y ST LYEY+G+G K+ANP HR F+WG R  E+   DFYISDFQSGLRAL
Sbjct:   270 SSFQRTPRCVYVSTELYEYKGFGGKSANPKHRCFSWGSRHAEKYVSDFYISDFQSGLRAL 329

Query:   370 VKTGYGARVTPYVDDSLAIDVNPGKEELSPEFIRWLAERNLSSDDRIMRLKEGYIKEGST 429
             VK GYG++V+P+V  +   +V    ++LSP F++WL++RNLS+DDR+MRLKEGYIKEGST
Sbjct:   330 VKAGYGSKVSPFVKPATVANVTTQNKDLSPSFLKWLSDRNLSADDRVMRLKEGYIKEGST 389

Query:   430 VSVMGVVQRNDNVLMIVPPPEPITTGCQWAKCIVPASLDGIVLRCEDASKNDVIPV 485
             VSVMG+V+R+DNVLMIVPP E +++GC+W  C+ P   DG+++ C+D    DVIPV
Sbjct:   390 VSVMGMVRRHDNVLMIVPPAEAVSSGCRWWHCLFPTYADGLIITCDDNQNADVIPV 445

 Score = 236 (88.1 bits), Expect = 4.0e-17, P = 4.0e-17
 Identities = 72/169 (42%), Positives = 87/169 (51%)

Query:     1 MGSRFPSHQLSNGLYVSGRPEQPKERTPTMSSVAMPYTGGDIKKSGELGKMFDIPVDGSK 60
             M  R  SHQL NGLYVSG+ EQPKER PTM++ A+PYTGGDIKKSGELG+MFDI V  S 
Sbjct:     1 MAGRIQSHQLPNGLYVSGKLEQPKERPPTMAARAVPYTGGDIKKSGELGRMFDISVVDSA 60

Query:    61 SRKSGPINNAPSRTG--SFGGAASHSGPIMPNAASRXXXXXXXXXXXXXXXXXXXLKKSN 118
             S +  P    P   G  S GG +    P  P  +                     +KK  
Sbjct:    61 SFQGPP----PLIVGGNSSGGTSRLQAP--PRVSG--SSSNPNSGSVRSGPNSGSVKKF- 111

Query:   119 SGPLNKHGEP--LKKSSGPQSGGVTPSGRQNSGPLAPALPTTGLITSGP 165
             SGPL++  +P  L  S    S G   SG + SG L   L  + L +S P
Sbjct:   112 SGPLSQL-QPTGLITSGSLGSSGPILSGSRRSGQLDHQL--SNLASSKP 157


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.135   0.409    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      485       466   0.00097  118 3  11 22  0.42    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  271 KB (2143 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  43.29u 0.10s 43.39t   Elapsed:  00:00:02
  Total cpu time:  43.29u 0.10s 43.39t   Elapsed:  00:00:02
  Start:  Fri May 10 14:48:15 2013   End:  Fri May 10 14:48:17 2013

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