Query 011476
Match_columns 485
No_of_seqs 393 out of 3548
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 08:56:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011476.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011476hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g6h_A Rotenone-insensitive NA 100.0 1.3E-49 4.5E-54 410.8 31.7 328 56-383 40-382 (502)
2 3klj_A NAD(FAD)-dependent dehy 100.0 1.3E-41 4.6E-46 340.1 22.4 277 56-393 7-288 (385)
3 4eqs_A Coenzyme A disulfide re 100.0 1.2E-40 3.9E-45 339.2 25.9 274 59-378 1-281 (437)
4 1xhc_A NADH oxidase /nitrite r 100.0 6.7E-40 2.3E-44 326.1 28.1 281 58-394 8-292 (367)
5 3ef6_A Toluene 1,2-dioxygenase 100.0 1E-39 3.4E-44 330.1 26.2 273 58-379 2-281 (410)
6 3lxd_A FAD-dependent pyridine 100.0 4.3E-39 1.5E-43 326.3 30.5 275 57-379 8-291 (415)
7 3fg2_P Putative rubredoxin red 100.0 5.8E-39 2E-43 324.1 29.3 273 58-379 1-281 (404)
8 3hyw_A Sulfide-quinone reducta 100.0 2E-39 7E-44 329.8 18.7 282 58-378 2-299 (430)
9 2gqw_A Ferredoxin reductase; f 100.0 1.9E-38 6.4E-43 320.5 24.3 267 57-378 6-278 (408)
10 1q1r_A Putidaredoxin reductase 100.0 3.5E-38 1.2E-42 320.7 25.8 273 58-378 4-289 (431)
11 2cdu_A NADPH oxidase; flavoenz 100.0 6.3E-38 2.1E-42 321.2 27.4 291 59-394 1-312 (452)
12 3ntd_A FAD-dependent pyridine 100.0 1.7E-37 5.9E-42 327.0 30.4 276 59-376 2-306 (565)
13 3oc4_A Oxidoreductase, pyridin 100.0 7.6E-38 2.6E-42 320.5 25.3 290 59-395 3-310 (452)
14 3ics_A Coenzyme A-disulfide re 100.0 5E-37 1.7E-41 324.7 30.1 280 55-376 33-321 (588)
15 2bc0_A NADH oxidase; flavoprot 100.0 2E-37 7E-42 320.3 25.4 276 57-377 34-330 (490)
16 3kd9_A Coenzyme A disulfide re 100.0 1.6E-37 5.5E-42 317.9 23.2 272 58-376 3-283 (449)
17 1nhp_A NADH peroxidase; oxidor 100.0 6.9E-37 2.4E-41 313.0 27.4 277 59-377 1-285 (447)
18 3cgb_A Pyridine nucleotide-dis 100.0 9.8E-37 3.3E-41 314.4 27.8 278 58-377 36-322 (480)
19 3iwa_A FAD-dependent pyridine 100.0 5.7E-37 1.9E-41 315.8 25.9 278 58-376 3-297 (472)
20 2v3a_A Rubredoxin reductase; a 100.0 2.2E-36 7.6E-41 303.2 28.7 269 58-377 4-281 (384)
21 3sx6_A Sulfide-quinone reducta 100.0 1E-36 3.4E-41 310.8 26.3 285 58-378 4-310 (437)
22 4gcm_A TRXR, thioredoxin reduc 100.0 6.3E-36 2.1E-40 291.4 24.6 283 57-394 5-299 (312)
23 3h8l_A NADH oxidase; membrane 100.0 1.4E-35 4.7E-40 300.0 25.9 282 59-380 2-314 (409)
24 4a5l_A Thioredoxin reductase; 100.0 6.2E-36 2.1E-40 291.5 20.1 286 57-394 3-305 (314)
25 3h28_A Sulfide-quinone reducta 100.0 4.5E-35 1.5E-39 298.0 23.5 283 58-378 2-299 (430)
26 3l8k_A Dihydrolipoyl dehydroge 100.0 7.5E-36 2.6E-40 306.8 17.8 270 58-379 4-314 (466)
27 2qae_A Lipoamide, dihydrolipoy 100.0 3.6E-35 1.2E-39 302.0 22.7 284 58-392 2-333 (468)
28 1mo9_A ORF3; nucleotide bindin 100.0 1.4E-34 4.9E-39 301.1 26.4 282 56-392 41-371 (523)
29 3f8d_A Thioredoxin reductase ( 100.0 1.1E-34 3.7E-39 283.5 24.0 281 57-394 14-310 (323)
30 3qfa_A Thioredoxin reductase 1 100.0 3E-35 1E-39 305.8 21.1 284 56-391 30-372 (519)
31 1zmd_A Dihydrolipoyl dehydroge 100.0 5.5E-35 1.9E-39 301.1 22.1 283 57-392 5-338 (474)
32 2a8x_A Dihydrolipoyl dehydroge 100.0 4.1E-35 1.4E-39 301.3 20.7 271 58-379 3-315 (464)
33 1ebd_A E3BD, dihydrolipoamide 100.0 3.4E-35 1.2E-39 301.1 19.9 282 58-392 3-326 (455)
34 2wpf_A Trypanothione reductase 100.0 5.9E-35 2E-39 301.8 21.3 286 58-391 7-347 (495)
35 2q7v_A Thioredoxin reductase; 100.0 2.5E-34 8.6E-39 281.7 24.5 281 57-394 7-305 (325)
36 3urh_A Dihydrolipoyl dehydroge 100.0 9.8E-35 3.3E-39 300.5 22.5 286 57-393 24-357 (491)
37 1fec_A Trypanothione reductase 100.0 8.6E-35 2.9E-39 300.4 21.8 285 58-391 3-343 (490)
38 1ges_A Glutathione reductase; 100.0 9.3E-35 3.2E-39 297.2 21.8 272 58-390 4-319 (450)
39 1zk7_A HGII, reductase, mercur 100.0 1.9E-34 6.4E-39 296.6 24.2 279 58-392 4-327 (467)
40 3dgz_A Thioredoxin reductase 2 100.0 1.1E-34 3.7E-39 299.9 22.4 284 57-391 5-344 (488)
41 1m6i_A Programmed cell death p 100.0 2.2E-34 7.4E-39 297.5 24.0 276 56-377 9-322 (493)
42 4b1b_A TRXR, thioredoxin reduc 100.0 1.4E-34 4.9E-39 299.4 22.7 269 58-378 42-363 (542)
43 2zbw_A Thioredoxin reductase; 100.0 2.6E-34 9E-39 282.7 23.5 282 58-393 5-309 (335)
44 3itj_A Thioredoxin reductase 1 100.0 6.5E-35 2.2E-39 287.0 19.0 292 53-394 17-328 (338)
45 1fl2_A Alkyl hydroperoxide red 100.0 3E-34 1E-38 279.1 23.1 279 59-394 2-298 (310)
46 3r9u_A Thioredoxin reductase; 100.0 1.1E-34 3.9E-39 282.4 20.1 280 57-394 3-305 (315)
47 1dxl_A Dihydrolipoamide dehydr 100.0 6.7E-35 2.3E-39 300.3 19.1 285 57-392 5-335 (470)
48 3vrd_B FCCB subunit, flavocyto 100.0 1.7E-34 5.7E-39 291.4 21.6 277 58-377 2-298 (401)
49 2eq6_A Pyruvate dehydrogenase 100.0 1.6E-34 5.4E-39 296.6 21.4 277 58-391 6-326 (464)
50 2q0l_A TRXR, thioredoxin reduc 100.0 2.4E-34 8.1E-39 280.0 21.5 275 59-393 2-301 (311)
51 2hqm_A GR, grase, glutathione 100.0 2.2E-34 7.6E-39 296.7 21.8 268 57-379 10-328 (479)
52 2r9z_A Glutathione amide reduc 100.0 5.2E-34 1.8E-38 292.6 23.9 273 58-390 4-318 (463)
53 3fbs_A Oxidoreductase; structu 100.0 3E-34 1E-38 277.1 20.4 271 58-394 2-285 (297)
54 1ojt_A Surface protein; redox- 100.0 3.5E-34 1.2E-38 295.6 21.8 286 58-392 6-342 (482)
55 1onf_A GR, grase, glutathione 100.0 7.2E-35 2.5E-39 301.9 16.6 269 58-375 2-314 (500)
56 3cty_A Thioredoxin reductase; 100.0 6.9E-34 2.4E-38 277.8 22.7 278 57-393 15-308 (319)
57 3dk9_A Grase, GR, glutathione 100.0 3.1E-34 1E-38 295.9 20.7 278 57-390 19-347 (478)
58 1xdi_A RV3303C-LPDA; reductase 100.0 1.8E-34 6.2E-39 299.0 18.8 281 58-391 2-334 (499)
59 3dgh_A TRXR-1, thioredoxin red 100.0 7.5E-34 2.6E-38 293.3 22.8 283 56-391 7-344 (483)
60 3lzw_A Ferredoxin--NADP reduct 100.0 5.8E-34 2E-38 279.5 20.1 277 58-393 7-307 (332)
61 1trb_A Thioredoxin reductase; 100.0 6.9E-34 2.3E-38 277.8 19.9 282 58-394 5-307 (320)
62 4fk1_A Putative thioredoxin re 100.0 4.7E-34 1.6E-38 277.1 18.5 278 57-394 5-293 (304)
63 1v59_A Dihydrolipoamide dehydr 100.0 6.4E-34 2.2E-38 293.5 20.0 283 58-390 5-341 (478)
64 3ab1_A Ferredoxin--NADP reduct 100.0 1.1E-33 3.8E-38 281.1 20.7 279 58-393 14-320 (360)
65 4dna_A Probable glutathione re 100.0 1.5E-33 5E-38 289.5 19.9 273 58-390 5-322 (463)
66 3lad_A Dihydrolipoamide dehydr 100.0 5.9E-33 2E-37 286.2 24.3 283 57-391 2-335 (476)
67 1lvl_A Dihydrolipoamide dehydr 100.0 3E-33 1E-37 286.6 21.7 273 58-390 5-321 (458)
68 2x8g_A Thioredoxin glutathione 100.0 2.9E-33 9.9E-38 296.3 21.2 286 56-392 105-452 (598)
69 2yqu_A 2-oxoglutarate dehydrog 100.0 1.2E-33 4E-38 289.7 17.6 265 59-379 2-308 (455)
70 2vdc_G Glutamate synthase [NAD 100.0 9.7E-34 3.3E-38 288.7 16.4 289 56-394 120-437 (456)
71 3ic9_A Dihydrolipoamide dehydr 100.0 2E-33 6.9E-38 290.3 19.1 276 58-390 8-329 (492)
72 1vdc_A NTR, NADPH dependent th 100.0 3.2E-33 1.1E-37 274.7 19.0 287 58-394 8-316 (333)
73 2a87_A TRXR, TR, thioredoxin r 100.0 3.8E-33 1.3E-37 274.5 19.4 282 56-394 12-309 (335)
74 1hyu_A AHPF, alkyl hydroperoxi 100.0 1.6E-32 5.5E-37 285.2 24.6 278 57-394 211-509 (521)
75 3o0h_A Glutathione reductase; 100.0 4.9E-33 1.7E-37 287.1 20.4 273 58-390 26-342 (484)
76 3d1c_A Flavin-containing putat 100.0 4.5E-31 1.5E-35 263.0 21.2 268 58-380 4-315 (369)
77 4a9w_A Monooxygenase; baeyer-v 100.0 3.1E-31 1E-35 262.5 19.6 279 58-393 3-344 (357)
78 1lqt_A FPRA; NADP+ derivative, 100.0 2.4E-31 8.1E-36 271.4 11.9 301 58-393 3-379 (456)
79 1cjc_A Protein (adrenodoxin re 100.0 1.1E-31 3.8E-36 274.1 9.1 303 57-394 5-388 (460)
80 1gte_A Dihydropyrimidine dehyd 100.0 7.7E-31 2.6E-35 292.0 16.1 283 57-393 186-500 (1025)
81 1o94_A Tmadh, trimethylamine d 100.0 1.1E-30 3.8E-35 281.4 14.8 281 54-396 385-695 (729)
82 3k30_A Histamine dehydrogenase 100.0 1.7E-30 5.7E-35 278.9 14.2 306 17-395 346-669 (690)
83 2xve_A Flavin-containing monoo 100.0 5.8E-29 2E-33 254.9 24.7 256 59-379 3-321 (464)
84 2gag_A Heterotetrameric sarcos 100.0 4.7E-30 1.6E-34 283.8 17.4 284 58-393 128-436 (965)
85 3s5w_A L-ornithine 5-monooxyge 100.0 2E-29 6.9E-34 259.0 19.0 281 57-376 29-420 (463)
86 1ps9_A 2,4-dienoyl-COA reducta 100.0 1.3E-29 4.4E-34 271.4 15.6 275 54-394 369-669 (671)
87 2gv8_A Monooxygenase; FMO, FAD 99.9 5.2E-27 1.8E-31 239.7 18.7 258 57-378 5-341 (447)
88 1y56_A Hypothetical protein PH 99.9 9.4E-28 3.2E-32 247.8 12.3 254 58-394 108-370 (493)
89 3gwf_A Cyclohexanone monooxyge 99.9 2.9E-27 9.8E-32 246.0 14.7 265 57-376 7-433 (540)
90 4ap3_A Steroid monooxygenase; 99.9 1.1E-25 3.9E-30 234.4 13.6 170 57-272 20-226 (549)
91 3uox_A Otemo; baeyer-villiger 99.9 4.9E-26 1.7E-30 237.0 8.2 176 57-272 8-220 (545)
92 1w4x_A Phenylacetone monooxyge 99.9 7.4E-23 2.5E-27 213.8 18.9 170 57-272 15-221 (542)
93 4b63_A L-ornithine N5 monooxyg 99.8 4.2E-19 1.4E-23 183.3 23.2 184 56-273 37-284 (501)
94 2ywl_A Thioredoxin reductase r 99.8 9.6E-19 3.3E-23 155.6 16.5 143 225-393 3-163 (180)
95 2e5v_A L-aspartate oxidase; ar 99.6 1.4E-17 5E-22 170.5 -1.5 257 60-376 1-340 (472)
96 3fpz_A Thiazole biosynthetic e 99.5 2.2E-17 7.6E-22 161.2 -11.0 227 58-376 65-294 (326)
97 2gqf_A Hypothetical protein HI 99.5 2.3E-14 7.9E-19 143.5 4.8 108 58-175 4-168 (401)
98 2cul_A Glucose-inhibited divis 99.4 4.2E-12 1.4E-16 117.3 15.4 92 225-333 5-123 (232)
99 3k7m_X 6-hydroxy-L-nicotine ox 99.2 4.1E-11 1.4E-15 121.2 11.0 93 279-376 205-307 (431)
100 3ces_A MNMG, tRNA uridine 5-ca 99.1 1.5E-10 5E-15 120.7 8.3 115 58-184 28-190 (651)
101 2ywl_A Thioredoxin reductase r 99.1 1.8E-10 6.2E-15 101.7 7.1 107 59-177 2-112 (180)
102 2cul_A Glucose-inhibited divis 99.0 6.7E-10 2.3E-14 102.4 7.6 114 58-183 3-133 (232)
103 1rp0_A ARA6, thiazole biosynth 99.0 3.3E-09 1.1E-13 100.9 11.8 136 225-376 41-244 (284)
104 2zxi_A TRNA uridine 5-carboxym 98.9 6.1E-10 2.1E-14 115.6 6.6 115 58-184 27-189 (637)
105 3cp8_A TRNA uridine 5-carboxym 98.9 8.4E-10 2.9E-14 114.9 4.8 115 57-183 20-182 (641)
106 1rp0_A ARA6, thiazole biosynth 98.9 9.2E-09 3.1E-13 97.8 10.6 119 58-177 39-193 (284)
107 3v76_A Flavoprotein; structura 98.9 2E-09 6.8E-14 108.0 6.2 109 57-175 26-187 (417)
108 4dgk_A Phytoene dehydrogenase; 98.8 3.1E-09 1.1E-13 109.5 7.8 53 278-332 221-275 (501)
109 3alj_A 2-methyl-3-hydroxypyrid 98.8 4.6E-09 1.6E-13 104.3 8.2 106 58-175 11-160 (379)
110 3nlc_A Uncharacterized protein 98.8 6.3E-09 2.1E-13 107.5 9.0 110 56-176 105-278 (549)
111 2bry_A NEDD9 interacting prote 98.8 4.4E-09 1.5E-13 108.2 7.3 120 56-181 90-236 (497)
112 2bry_A NEDD9 interacting prote 98.8 9.8E-10 3.3E-14 113.0 2.0 150 163-333 37-228 (497)
113 3dme_A Conserved exported prot 98.8 1.6E-07 5.3E-12 92.3 16.9 67 277-348 149-219 (369)
114 2gag_B Heterotetrameric sarcos 98.8 2.9E-07 9.9E-12 91.8 18.3 77 263-348 161-239 (405)
115 3ka7_A Oxidoreductase; structu 98.7 3.4E-07 1.2E-11 92.0 18.2 52 278-332 196-249 (425)
116 3nrn_A Uncharacterized protein 98.7 6.4E-09 2.2E-13 104.7 5.2 51 277-332 188-240 (421)
117 2i0z_A NAD(FAD)-utilizing dehy 98.7 1.1E-08 3.8E-13 103.8 6.6 111 56-175 24-191 (447)
118 3pl8_A Pyranose 2-oxidase; sub 98.7 1.8E-09 6.1E-14 113.9 0.7 39 57-95 45-83 (623)
119 2gf3_A MSOX, monomeric sarcosi 98.7 5.2E-07 1.8E-11 89.4 18.0 85 253-347 126-213 (389)
120 3oz2_A Digeranylgeranylglycero 98.6 3.1E-08 1.1E-12 98.3 6.1 37 58-94 4-40 (397)
121 1ryi_A Glycine oxidase; flavop 98.6 2.1E-08 7.3E-13 99.3 4.9 37 56-92 15-51 (382)
122 1y0p_A Fumarate reductase flav 98.6 8.2E-08 2.8E-12 100.5 9.4 38 58-95 126-163 (571)
123 2x3n_A Probable FAD-dependent 98.6 4.3E-08 1.5E-12 97.9 6.8 36 58-93 6-41 (399)
124 3nyc_A D-arginine dehydrogenas 98.6 3.1E-08 1.1E-12 98.0 5.6 38 56-94 7-44 (381)
125 3nix_A Flavoprotein/dehydrogen 98.6 7.6E-08 2.6E-12 96.7 7.6 111 58-175 5-166 (421)
126 3atr_A Conserved archaeal prot 98.6 1.6E-07 5.3E-12 95.5 9.9 113 58-176 6-163 (453)
127 3rp8_A Flavoprotein monooxygen 98.6 9.1E-08 3.1E-12 95.8 7.7 40 54-93 19-58 (407)
128 1yvv_A Amine oxidase, flavin-c 98.5 9.8E-08 3.4E-12 92.7 7.6 38 58-95 2-39 (336)
129 3ps9_A TRNA 5-methylaminomethy 98.5 1.4E-07 4.7E-12 100.9 9.4 37 57-93 271-307 (676)
130 3qj4_A Renalase; FAD/NAD(P)-bi 98.5 9.4E-08 3.2E-12 93.3 7.4 37 59-95 2-41 (342)
131 3dje_A Fructosyl amine: oxygen 98.5 1.1E-06 3.6E-11 88.8 15.4 54 278-333 161-219 (438)
132 1y56_B Sarcosine oxidase; dehy 98.5 1.2E-07 4.3E-12 93.8 8.1 35 57-91 4-38 (382)
133 1qo8_A Flavocytochrome C3 fuma 98.5 1.4E-07 4.8E-12 98.6 8.7 39 57-95 120-158 (566)
134 3cgv_A Geranylgeranyl reductas 98.5 9.6E-08 3.3E-12 95.0 6.6 112 58-175 4-162 (397)
135 3ihg_A RDME; flavoenzyme, anth 98.5 2.1E-07 7.1E-12 96.7 9.2 37 57-93 4-40 (535)
136 3pvc_A TRNA 5-methylaminomethy 98.5 2.3E-06 8E-11 91.5 17.4 54 277-333 411-467 (689)
137 2yqu_A 2-oxoglutarate dehydrog 98.5 1.4E-07 4.7E-12 96.0 7.3 103 57-179 166-268 (455)
138 3fmw_A Oxygenase; mithramycin, 98.5 1E-07 3.5E-12 99.4 6.4 113 57-175 48-207 (570)
139 2uzz_A N-methyl-L-tryptophan o 98.5 9.4E-08 3.2E-12 94.3 5.8 35 58-92 2-36 (372)
140 3e1t_A Halogenase; flavoprotei 98.5 2.2E-07 7.4E-12 96.0 8.5 112 58-176 7-173 (512)
141 2xdo_A TETX2 protein; tetracyc 98.5 2E-07 6.7E-12 93.0 7.9 37 57-93 25-61 (398)
142 1s3e_A Amine oxidase [flavin-c 98.5 6.6E-07 2.3E-11 92.5 11.8 70 58-127 4-79 (520)
143 2qa1_A PGAE, polyketide oxygen 98.5 3.1E-07 1E-11 94.4 9.1 115 55-175 8-165 (500)
144 2gqw_A Ferredoxin reductase; f 98.5 3.1E-07 1.1E-11 91.9 8.8 97 58-177 145-241 (408)
145 2oln_A NIKD protein; flavoprot 98.5 1.6E-07 5.4E-12 93.6 6.5 35 58-92 4-38 (397)
146 2v3a_A Rubredoxin reductase; a 98.5 2.9E-07 9.8E-12 91.4 8.2 99 58-177 145-245 (384)
147 3kkj_A Amine oxidase, flavin-c 98.4 7.5E-08 2.6E-12 90.0 3.7 40 58-97 2-41 (336)
148 2eq6_A Pyruvate dehydrogenase 98.4 3.2E-07 1.1E-11 93.5 8.4 108 57-179 168-275 (464)
149 3i3l_A Alkylhalidase CMLS; fla 98.4 2.5E-07 8.7E-12 96.7 7.7 35 58-92 23-57 (591)
150 1nhp_A NADH peroxidase; oxidor 98.4 3.2E-07 1.1E-11 93.1 8.0 102 57-180 148-251 (447)
151 1k0i_A P-hydroxybenzoate hydro 98.4 2E-07 6.8E-12 92.8 6.3 35 58-92 2-36 (394)
152 2qa2_A CABE, polyketide oxygen 98.4 4E-07 1.4E-11 93.5 8.5 112 56-175 10-166 (499)
153 1d4d_A Flavocytochrome C fumar 98.4 7.4E-07 2.5E-11 93.2 10.5 39 57-95 125-163 (572)
154 4a9w_A Monooxygenase; baeyer-v 98.4 1.3E-06 4.6E-11 85.1 11.7 96 225-337 5-134 (357)
155 1ebd_A E3BD, dihydrolipoamide 98.4 4.5E-07 1.5E-11 92.1 8.3 106 57-179 169-274 (455)
156 2vou_A 2,6-dihydroxypyridine h 98.4 5.7E-07 1.9E-11 89.7 8.8 36 57-92 4-39 (397)
157 1lvl_A Dihydrolipoamide dehydr 98.4 2.6E-07 8.7E-12 94.0 6.0 103 57-179 170-272 (458)
158 3da1_A Glycerol-3-phosphate de 98.4 7.7E-07 2.6E-11 92.7 9.3 36 57-92 17-52 (561)
159 3nlc_A Uncharacterized protein 98.4 2.2E-06 7.5E-11 88.5 12.3 108 224-348 108-289 (549)
160 3lzw_A Ferredoxin--NADP reduct 98.4 1.2E-06 4E-11 84.7 9.8 92 224-333 8-121 (332)
161 3lxd_A FAD-dependent pyridine 98.4 8.3E-07 2.8E-11 89.0 8.9 99 58-177 152-253 (415)
162 3alj_A 2-methyl-3-hydroxypyrid 98.3 4.4E-06 1.5E-10 82.6 13.9 98 224-341 12-164 (379)
163 2gmh_A Electron transfer flavo 98.3 3.6E-07 1.2E-11 95.7 6.2 39 57-95 34-78 (584)
164 3c4n_A Uncharacterized protein 98.3 1.7E-07 5.7E-12 93.8 3.2 35 58-92 36-72 (405)
165 4at0_A 3-ketosteroid-delta4-5a 98.3 1.1E-06 3.9E-11 90.5 9.5 39 57-95 40-78 (510)
166 3ef6_A Toluene 1,2-dioxygenase 98.3 5E-07 1.7E-11 90.5 6.6 99 58-177 143-243 (410)
167 3axb_A Putative oxidoreductase 98.3 1.5E-06 5.2E-11 88.0 10.2 78 262-348 167-263 (448)
168 2qcu_A Aerobic glycerol-3-phos 98.3 8.3E-07 2.8E-11 91.3 8.1 34 58-91 3-36 (501)
169 3hyw_A Sulfide-quinone reducta 98.3 3.6E-07 1.2E-11 92.2 5.2 94 224-333 3-107 (430)
170 1ges_A Glutathione reductase; 98.3 6.8E-07 2.3E-11 90.6 7.2 99 58-178 167-268 (450)
171 3sx6_A Sulfide-quinone reducta 98.3 9.7E-07 3.3E-11 89.2 8.2 99 224-339 5-114 (437)
172 2xve_A Flavin-containing monoo 98.3 4.6E-06 1.6E-10 84.8 13.2 105 224-339 3-170 (464)
173 3vrd_B FCCB subunit, flavocyto 98.3 8.2E-07 2.8E-11 88.6 7.4 99 223-339 2-110 (401)
174 1onf_A GR, grase, glutathione 98.3 1.6E-06 5.6E-11 89.1 9.6 99 58-178 176-278 (500)
175 1v59_A Dihydrolipoamide dehydr 98.3 1.4E-06 4.7E-11 89.1 9.0 104 58-178 183-290 (478)
176 3h8l_A NADH oxidase; membrane 98.3 9.9E-07 3.4E-11 88.3 7.8 101 224-339 2-115 (409)
177 4eqs_A Coenzyme A disulfide re 98.3 1.3E-06 4.6E-11 88.1 8.7 97 58-178 147-243 (437)
178 3itj_A Thioredoxin reductase 1 98.3 2.5E-06 8.7E-11 82.5 10.4 95 222-333 21-140 (338)
179 3f8d_A Thioredoxin reductase ( 98.3 3.7E-06 1.3E-10 80.7 11.5 96 224-339 16-127 (323)
180 3klj_A NAD(FAD)-dependent dehy 98.3 2.8E-06 9.5E-11 84.2 10.5 96 225-339 11-118 (385)
181 3fg2_P Putative rubredoxin red 98.3 1.1E-06 3.9E-11 87.7 7.7 99 58-177 142-243 (404)
182 1q1r_A Putidaredoxin reductase 98.3 1.2E-06 4E-11 88.4 7.8 100 57-177 148-252 (431)
183 3jsk_A Cypbp37 protein; octame 98.3 1.5E-06 5.2E-11 83.8 8.0 38 58-95 79-118 (344)
184 2zbw_A Thioredoxin reductase; 98.3 3.4E-06 1.2E-10 81.7 10.7 93 224-333 6-119 (335)
185 3c96_A Flavin-containing monoo 98.3 1.3E-06 4.5E-11 87.4 7.9 36 58-93 4-40 (410)
186 1pj5_A N,N-dimethylglycine oxi 98.3 1.5E-05 5.1E-10 87.1 16.8 65 277-348 150-216 (830)
187 3v76_A Flavoprotein; structura 98.3 4.5E-06 1.6E-10 83.5 11.7 106 225-348 29-206 (417)
188 1zmd_A Dihydrolipoyl dehydroge 98.3 1.3E-06 4.4E-11 89.3 7.8 105 58-178 178-285 (474)
189 2bc0_A NADH oxidase; flavoprot 98.2 2E-06 6.8E-11 88.2 8.8 100 57-178 193-294 (490)
190 1trb_A Thioredoxin reductase; 98.2 2.9E-06 1E-10 81.5 9.5 103 57-178 144-250 (320)
191 1xhc_A NADH oxidase /nitrite r 98.2 9E-07 3.1E-11 87.2 5.9 94 58-177 143-236 (367)
192 2a8x_A Dihydrolipoyl dehydroge 98.2 1.3E-06 4.3E-11 89.0 7.2 103 57-179 170-275 (464)
193 1ojt_A Surface protein; redox- 98.2 8.8E-07 3E-11 90.7 5.6 103 58-178 185-289 (482)
194 3ics_A Coenzyme A-disulfide re 98.2 1.6E-06 5.5E-11 91.0 7.8 98 58-177 187-284 (588)
195 3ab1_A Ferredoxin--NADP reduct 98.2 5.9E-06 2E-10 80.9 11.2 93 224-333 15-129 (360)
196 1dxl_A Dihydrolipoamide dehydr 98.2 1E-06 3.5E-11 89.9 5.9 106 57-179 176-283 (470)
197 2gqf_A Hypothetical protein HI 98.2 1.3E-05 4.5E-10 79.8 13.8 106 225-348 6-187 (401)
198 3d1c_A Flavin-containing putat 98.2 6.8E-06 2.3E-10 80.7 11.6 96 225-338 6-146 (369)
199 2hqm_A GR, grase, glutathione 98.2 1.5E-06 5.1E-11 88.9 6.9 100 57-177 184-287 (479)
200 2cdu_A NADPH oxidase; flavoenz 98.2 2.6E-06 8.7E-11 86.5 8.6 100 58-178 149-250 (452)
201 3oc4_A Oxidoreductase, pyridin 98.2 3.4E-06 1.2E-10 85.5 9.5 104 57-180 146-249 (452)
202 3fbs_A Oxidoreductase; structu 98.2 3.1E-06 1.1E-10 80.3 8.7 90 57-178 140-229 (297)
203 1fec_A Trypanothione reductase 98.2 1.7E-06 5.8E-11 88.7 7.2 100 57-178 186-291 (490)
204 2wpf_A Trypanothione reductase 98.2 2E-06 6.9E-11 88.3 7.7 100 57-178 190-295 (495)
205 4b1b_A TRXR, thioredoxin reduc 98.2 1.8E-06 6.2E-11 89.1 7.4 102 56-178 221-322 (542)
206 3cgb_A Pyridine nucleotide-dis 98.2 1.9E-06 6.6E-11 88.1 7.4 101 57-178 185-285 (480)
207 2qae_A Lipoamide, dihydrolipoy 98.2 2E-06 7E-11 87.6 7.5 104 57-178 173-279 (468)
208 3kd9_A Coenzyme A disulfide re 98.2 5E-06 1.7E-10 84.2 10.2 100 224-339 4-116 (449)
209 2dkh_A 3-hydroxybenzoate hydro 98.2 4E-06 1.4E-10 88.8 9.8 37 57-93 31-68 (639)
210 3cty_A Thioredoxin reductase; 98.2 7.9E-06 2.7E-10 78.5 11.0 98 58-178 155-255 (319)
211 2gv8_A Monooxygenase; FMO, FAD 98.2 8.3E-06 2.8E-10 82.5 11.4 102 224-339 7-181 (447)
212 1fl2_A Alkyl hydroperoxide red 98.2 1E-05 3.5E-10 77.3 11.5 92 225-333 3-113 (310)
213 2r9z_A Glutathione amide reduc 98.2 2.4E-06 8.3E-11 86.9 7.3 102 58-178 166-267 (463)
214 1qo8_A Flavocytochrome C3 fuma 98.2 3.1E-05 1E-09 80.8 15.8 54 280-333 252-310 (566)
215 3lad_A Dihydrolipoamide dehydr 98.1 4.5E-06 1.6E-10 85.2 9.1 103 57-178 179-283 (476)
216 3urh_A Dihydrolipoyl dehydroge 98.1 3.6E-06 1.2E-10 86.3 8.3 106 57-179 197-304 (491)
217 2q7v_A Thioredoxin reductase; 98.1 1E-05 3.5E-10 77.9 11.1 99 58-178 152-252 (325)
218 1vdc_A NTR, NADPH dependent th 98.1 1.1E-05 3.6E-10 78.1 11.1 99 57-178 158-262 (333)
219 1zk7_A HGII, reductase, mercur 98.1 3E-06 1E-10 86.3 7.4 99 58-178 176-274 (467)
220 3r9u_A Thioredoxin reductase; 98.1 1.3E-05 4.4E-10 76.7 11.4 95 224-339 5-120 (315)
221 2aqj_A Tryptophan halogenase, 98.1 3.5E-06 1.2E-10 87.5 7.9 34 58-91 5-41 (538)
222 3iwa_A FAD-dependent pyridine 98.1 3.2E-06 1.1E-10 86.2 7.5 99 58-177 159-260 (472)
223 1chu_A Protein (L-aspartate ox 98.1 9.2E-06 3.2E-10 84.1 10.9 37 57-94 7-43 (540)
224 3ntd_A FAD-dependent pyridine 98.1 5.8E-06 2E-10 86.3 9.5 102 224-339 2-119 (565)
225 4hb9_A Similarities with proba 98.1 4E-06 1.4E-10 83.5 7.7 35 59-93 2-36 (412)
226 1kf6_A Fumarate reductase flav 98.1 4.9E-06 1.7E-10 87.3 8.7 35 58-92 5-41 (602)
227 3ic9_A Dihydrolipoamide dehydr 98.1 3.8E-06 1.3E-10 86.1 7.6 106 57-179 173-278 (492)
228 2wdq_A Succinate dehydrogenase 98.1 2.6E-05 9.1E-10 81.5 14.0 56 278-333 143-204 (588)
229 2i0z_A NAD(FAD)-utilizing dehy 98.1 2.9E-05 9.9E-10 78.5 13.8 108 225-348 28-210 (447)
230 2a87_A TRXR, TR, thioredoxin r 98.1 1.3E-05 4.4E-10 77.7 10.8 100 57-179 154-256 (335)
231 3h28_A Sulfide-quinone reducta 98.1 2.3E-06 7.7E-11 86.3 5.3 98 224-339 3-111 (430)
232 2q0l_A TRXR, thioredoxin reduc 98.1 2.4E-05 8.1E-10 74.8 12.2 91 225-333 3-112 (311)
233 3dgh_A TRXR-1, thioredoxin red 98.1 7.1E-06 2.4E-10 83.9 8.9 104 57-178 186-292 (483)
234 1xdi_A RV3303C-LPDA; reductase 98.1 4E-06 1.4E-10 86.2 6.8 102 57-178 181-282 (499)
235 2gjc_A Thiazole biosynthetic e 98.1 5E-06 1.7E-10 79.6 7.0 37 59-95 66-104 (326)
236 2rgh_A Alpha-glycerophosphate 98.1 6.2E-06 2.1E-10 86.1 8.3 34 58-91 32-65 (571)
237 1m6i_A Programmed cell death p 98.1 4.2E-06 1.4E-10 85.8 6.8 100 58-178 180-285 (493)
238 3o0h_A Glutathione reductase; 98.1 4.7E-06 1.6E-10 85.3 7.1 101 57-179 190-292 (484)
239 3dk9_A Grase, GR, glutathione 98.1 7.3E-06 2.5E-10 83.7 8.5 107 57-178 186-296 (478)
240 3gwf_A Cyclohexanone monooxyge 98.0 2E-05 7E-10 81.5 11.6 99 224-339 9-151 (540)
241 2h88_A Succinate dehydrogenase 98.0 9E-06 3.1E-10 85.4 9.0 35 58-92 18-52 (621)
242 3dgz_A Thioredoxin reductase 2 98.0 1E-05 3.4E-10 82.9 9.0 104 57-178 184-290 (488)
243 2r0c_A REBC; flavin adenine di 98.0 7E-06 2.4E-10 85.3 7.9 36 58-93 26-61 (549)
244 4gde_A UDP-galactopyranose mut 98.0 1.3E-06 4.5E-11 90.0 2.3 42 56-97 8-50 (513)
245 3s5w_A L-ornithine 5-monooxyge 98.0 2E-05 6.9E-10 80.0 10.8 106 225-341 32-196 (463)
246 4ap3_A Steroid monooxygenase; 98.0 2.3E-05 7.9E-10 81.3 11.3 98 224-338 22-162 (549)
247 1mo9_A ORF3; nucleotide bindin 98.0 8.7E-06 3E-10 84.1 8.1 101 59-178 215-319 (523)
248 1y0p_A Fumarate reductase flav 98.0 5.2E-05 1.8E-09 79.2 14.0 54 279-333 256-315 (571)
249 2x3n_A Probable FAD-dependent 98.0 3.1E-05 1.1E-09 76.9 11.6 93 224-333 7-164 (399)
250 2weu_A Tryptophan 5-halogenase 98.0 5.7E-06 1.9E-10 85.3 6.3 34 58-91 2-38 (511)
251 2vdc_G Glutamate synthase [NAD 98.0 6.6E-06 2.3E-10 83.3 6.5 88 222-333 121-217 (456)
252 3qfa_A Thioredoxin reductase 1 98.0 1.4E-05 4.9E-10 82.4 9.1 105 57-179 209-319 (519)
253 3uox_A Otemo; baeyer-villiger 98.0 2.4E-05 8.2E-10 81.1 10.7 100 224-339 10-151 (545)
254 1hyu_A AHPF, alkyl hydroperoxi 98.0 4.4E-05 1.5E-09 78.7 12.4 93 224-333 213-324 (521)
255 1k0i_A P-hydroxybenzoate hydro 98.0 5.3E-05 1.8E-09 75.1 12.6 95 225-333 4-161 (394)
256 2e4g_A Tryptophan halogenase; 98.0 7.9E-06 2.7E-10 85.0 6.8 35 57-91 24-61 (550)
257 2bs2_A Quinol-fumarate reducta 97.9 2.5E-05 8.4E-10 82.6 10.2 36 58-93 5-40 (660)
258 1d4d_A Flavocytochrome C fumar 97.9 6.7E-05 2.3E-09 78.3 13.4 65 280-346 257-326 (572)
259 3nix_A Flavoprotein/dehydrogen 97.9 4.1E-05 1.4E-09 76.5 11.2 94 225-333 7-164 (421)
260 4dna_A Probable glutathione re 97.9 1.2E-05 4.1E-10 81.7 7.2 102 57-179 169-272 (463)
261 2vou_A 2,6-dihydroxypyridine h 97.9 4.5E-05 1.5E-09 75.8 11.1 100 224-342 6-158 (397)
262 2pyx_A Tryptophan halogenase; 97.9 1.7E-05 6E-10 81.9 8.3 34 58-91 7-52 (526)
263 4gcm_A TRXR, thioredoxin reduc 97.9 5.7E-05 1.9E-09 72.3 11.3 95 225-338 8-117 (312)
264 4a5l_A Thioredoxin reductase; 97.9 5.2E-05 1.8E-09 72.5 10.7 92 225-333 6-119 (314)
265 1yvv_A Amine oxidase, flavin-c 97.9 0.0001 3.4E-09 71.2 12.8 91 225-332 4-159 (336)
266 3nks_A Protoporphyrinogen oxid 97.9 6.9E-06 2.3E-10 83.8 4.5 40 58-97 2-43 (477)
267 3l8k_A Dihydrolipoyl dehydroge 97.9 3.4E-05 1.1E-09 78.5 9.5 97 225-339 6-146 (466)
268 2e1m_A L-glutamate oxidase; L- 97.9 8E-06 2.7E-10 80.1 4.6 42 56-97 42-84 (376)
269 3i3l_A Alkylhalidase CMLS; fla 97.9 0.00012 4.1E-09 76.4 13.4 96 224-333 24-186 (591)
270 3ces_A MNMG, tRNA uridine 5-ca 97.8 7.9E-05 2.7E-09 77.7 11.6 92 225-333 30-179 (651)
271 3atr_A Conserved archaeal prot 97.8 8.8E-05 3E-09 75.1 11.7 95 225-333 8-160 (453)
272 3k30_A Histamine dehydrogenase 97.8 4E-05 1.4E-09 81.9 9.5 103 57-177 522-626 (690)
273 1y56_B Sarcosine oxidase; dehy 97.8 0.00019 6.6E-09 70.6 13.8 50 281-333 152-203 (382)
274 4fk1_A Putative thioredoxin re 97.8 9.8E-05 3.4E-09 70.4 11.2 94 225-338 8-118 (304)
275 2b9w_A Putative aminooxidase; 97.8 9.1E-06 3.1E-10 81.5 4.0 41 57-97 5-46 (424)
276 3gyx_A Adenylylsulfate reducta 97.8 2.6E-05 9E-10 82.4 7.7 34 58-91 22-61 (662)
277 2bcg_G Secretory pathway GDP d 97.8 1E-05 3.5E-10 82.0 4.1 41 57-97 10-50 (453)
278 1ryi_A Glycine oxidase; flavop 97.8 0.00013 4.4E-09 71.9 11.9 61 279-347 165-227 (382)
279 3c96_A Flavin-containing monoo 97.8 0.00013 4.5E-09 72.7 11.9 101 225-341 6-173 (410)
280 4g6h_A Rotenone-insensitive NA 97.8 2.6E-05 9E-10 79.9 6.8 101 59-176 218-333 (502)
281 1rsg_A FMS1 protein; FAD bindi 97.8 8.3E-06 2.8E-10 84.2 3.0 40 58-97 8-48 (516)
282 2ivd_A PPO, PPOX, protoporphyr 97.8 1.4E-05 4.9E-10 81.4 4.3 42 56-97 14-55 (478)
283 2jae_A L-amino acid oxidase; o 97.8 1.7E-05 5.9E-10 81.1 4.9 41 56-96 9-49 (489)
284 3i6d_A Protoporphyrinogen oxid 97.7 7.2E-06 2.5E-10 83.3 1.5 39 58-96 5-49 (470)
285 3cgv_A Geranylgeranyl reductas 97.7 0.00026 8.9E-09 69.9 12.7 95 225-333 6-160 (397)
286 3qj4_A Renalase; FAD/NAD(P)-bi 97.7 0.00017 5.9E-09 69.9 11.1 94 225-332 3-162 (342)
287 2zxi_A TRNA uridine 5-carboxym 97.7 0.00028 9.5E-09 73.4 13.0 92 225-333 29-178 (637)
288 1w4x_A Phenylacetone monooxyge 97.7 0.00016 5.5E-09 74.9 11.3 99 224-339 17-158 (542)
289 3hdq_A UDP-galactopyranose mut 97.7 1.9E-05 6.4E-10 78.2 4.0 43 56-98 27-69 (397)
290 3ihg_A RDME; flavoenzyme, anth 97.7 0.00025 8.7E-09 73.3 12.6 55 279-333 121-181 (535)
291 3oz2_A Digeranylgeranylglycero 97.7 0.00019 6.5E-09 70.7 10.9 95 225-333 6-160 (397)
292 3e1t_A Halogenase; flavoprotei 97.7 0.00023 8E-09 73.1 11.9 96 224-333 8-170 (512)
293 2vvm_A Monoamine oxidase N; FA 97.7 2.2E-05 7.6E-10 80.4 4.2 40 58-97 39-78 (495)
294 1v0j_A UDP-galactopyranose mut 97.7 1.8E-05 6.2E-10 78.7 3.4 41 58-98 7-48 (399)
295 3ihm_A Styrene monooxygenase A 97.7 1.7E-05 5.7E-10 79.9 3.1 36 56-91 20-55 (430)
296 2x8g_A Thioredoxin glutathione 97.6 0.0001 3.4E-09 77.5 8.9 104 58-178 286-398 (598)
297 2yg5_A Putrescine oxidase; oxi 97.6 1.9E-05 6.4E-10 79.9 3.3 69 58-127 5-79 (453)
298 3rp8_A Flavoprotein monooxygen 97.6 0.00035 1.2E-08 69.5 12.3 92 223-333 23-179 (407)
299 1sez_A Protoporphyrinogen oxid 97.6 3E-05 1E-09 79.6 4.6 41 57-97 12-52 (504)
300 1pn0_A Phenol 2-monooxygenase; 97.6 5.1E-05 1.7E-09 80.6 6.4 35 58-92 8-47 (665)
301 1i8t_A UDP-galactopyranose mut 97.6 2.9E-05 9.8E-10 76.4 3.9 39 59-97 2-40 (367)
302 1cjc_A Protein (adrenodoxin re 97.6 4.3E-05 1.5E-09 77.5 5.1 89 223-333 6-104 (460)
303 1y56_A Hypothetical protein PH 97.6 7.4E-05 2.5E-09 76.5 6.7 93 224-332 109-216 (493)
304 2iid_A L-amino-acid oxidase; f 97.6 3.1E-05 1.1E-09 79.4 3.9 42 56-97 31-72 (498)
305 2uzz_A N-methyl-L-tryptophan o 97.6 0.00041 1.4E-08 67.9 11.6 51 279-333 150-202 (372)
306 3cp8_A TRNA uridine 5-carboxym 97.6 0.0005 1.7E-08 71.6 12.5 92 225-333 23-172 (641)
307 3nyc_A D-arginine dehydrogenas 97.5 0.00056 1.9E-08 67.0 12.0 60 280-347 156-217 (381)
308 2gmh_A Electron transfer flavo 97.5 0.00073 2.5E-08 70.5 13.4 68 279-348 145-229 (584)
309 3fmw_A Oxygenase; mithramycin, 97.5 0.00045 1.5E-08 71.9 11.7 94 225-333 51-205 (570)
310 3lov_A Protoporphyrinogen oxid 97.5 3.6E-05 1.2E-09 78.4 3.3 39 58-96 4-44 (475)
311 1ps9_A 2,4-dienoyl-COA reducta 97.5 0.00023 8E-09 75.7 9.6 109 57-177 493-630 (671)
312 2oln_A NIKD protein; flavoprot 97.5 0.0011 3.8E-08 65.5 14.1 59 281-347 156-216 (397)
313 2bi7_A UDP-galactopyranose mut 97.5 5.6E-05 1.9E-09 74.7 4.5 39 59-97 4-42 (384)
314 2qa1_A PGAE, polyketide oxygen 97.5 0.00083 2.8E-08 68.8 13.4 95 224-333 12-163 (500)
315 2qa2_A CABE, polyketide oxygen 97.5 0.00087 3E-08 68.6 13.3 95 224-333 13-164 (499)
316 1c0p_A D-amino acid oxidase; a 97.5 5.5E-05 1.9E-09 74.1 3.7 35 57-91 5-39 (363)
317 2qcu_A Aerobic glycerol-3-phos 97.5 0.0011 3.7E-08 68.0 13.5 62 280-345 151-216 (501)
318 2z3y_A Lysine-specific histone 97.5 7E-05 2.4E-09 79.6 4.6 42 55-96 104-145 (662)
319 1gte_A Dihydropyrimidine dehyd 97.5 7.4E-05 2.5E-09 83.3 5.0 90 222-333 186-285 (1025)
320 4at0_A 3-ketosteroid-delta4-5a 97.4 0.0014 4.7E-08 67.3 14.0 55 279-333 203-262 (510)
321 2gag_A Heterotetrameric sarcos 97.4 0.00015 5.2E-09 80.2 7.2 98 58-177 284-385 (965)
322 3ps9_A TRNA 5-methylaminomethy 97.4 0.00084 2.9E-08 71.5 12.7 49 282-333 421-471 (676)
323 4hb9_A Similarities with proba 97.4 0.00092 3.1E-08 66.1 12.2 92 225-333 3-164 (412)
324 2xdo_A TETX2 protein; tetracyc 97.4 0.00055 1.9E-08 67.8 10.5 93 224-333 27-180 (398)
325 1lqt_A FPRA; NADP+ derivative, 97.4 7.3E-05 2.5E-09 75.7 4.1 92 224-333 4-106 (456)
326 2xag_A Lysine-specific histone 97.4 8.1E-05 2.8E-09 80.7 4.6 41 56-96 276-316 (852)
327 4dsg_A UDP-galactopyranose mut 97.4 7E-05 2.4E-09 76.5 3.9 42 57-98 8-50 (484)
328 3c4a_A Probable tryptophan hyd 97.4 5.4E-05 1.8E-09 74.8 2.8 35 59-93 1-37 (381)
329 1o94_A Tmadh, trimethylamine d 97.4 0.00029 9.8E-09 75.7 8.6 109 57-177 527-648 (729)
330 3da1_A Glycerol-3-phosphate de 97.4 0.001 3.6E-08 69.0 12.3 65 280-348 172-241 (561)
331 1d5t_A Guanine nucleotide diss 97.3 0.00011 3.8E-09 73.8 4.1 41 57-97 5-45 (433)
332 3c4n_A Uncharacterized protein 97.3 0.0011 3.9E-08 65.7 11.1 61 280-348 174-246 (405)
333 3g5s_A Methylenetetrahydrofola 97.3 0.00011 3.9E-09 71.4 3.4 33 59-91 2-34 (443)
334 2dkh_A 3-hydroxybenzoate hydro 97.3 0.00084 2.9E-08 70.9 10.3 55 279-333 142-209 (639)
335 3p1w_A Rabgdi protein; GDI RAB 97.3 0.00012 4.2E-09 73.9 3.6 54 278-333 256-312 (475)
336 4gut_A Lysine-specific histone 97.2 0.00011 3.9E-09 78.9 3.3 41 56-96 334-374 (776)
337 3g3e_A D-amino-acid oxidase; F 97.2 8.5E-05 2.9E-09 72.3 2.1 34 59-92 1-40 (351)
338 3c4a_A Probable tryptophan hyd 97.2 0.00041 1.4E-08 68.4 7.0 85 225-333 2-141 (381)
339 1b37_A Protein (polyamine oxid 97.2 0.00016 5.6E-09 73.4 3.7 41 57-97 3-44 (472)
340 2gjc_A Thiazole biosynthetic e 97.2 0.0044 1.5E-07 59.2 13.0 69 225-305 67-174 (326)
341 2aqj_A Tryptophan halogenase, 97.1 0.0034 1.2E-07 64.9 12.7 49 282-333 169-220 (538)
342 3jsk_A Cypbp37 protein; octame 97.1 0.0047 1.6E-07 59.4 12.7 137 224-375 80-303 (344)
343 2r0c_A REBC; flavin adenine di 97.1 0.0028 9.6E-08 65.6 12.0 51 280-333 140-194 (549)
344 1kf6_A Fumarate reductase flav 97.1 0.0038 1.3E-07 65.3 12.5 51 282-332 138-194 (602)
345 4g65_A TRK system potassium up 97.0 0.0035 1.2E-07 63.2 11.3 33 58-90 3-35 (461)
346 4b63_A L-ornithine N5 monooxyg 97.0 0.0034 1.2E-07 64.2 10.8 115 225-341 41-218 (501)
347 2rgh_A Alpha-glycerophosphate 96.9 0.006 2.1E-07 63.4 12.7 61 282-346 192-257 (571)
348 2e5v_A L-aspartate oxidase; ar 96.9 0.0059 2E-07 61.9 12.2 50 281-333 122-174 (472)
349 3ayj_A Pro-enzyme of L-phenyla 96.9 0.00029 9.8E-09 74.5 2.1 36 58-93 56-100 (721)
350 1jnr_A Adenylylsulfate reducta 96.8 0.00055 1.9E-08 72.3 3.9 36 57-92 21-60 (643)
351 2e4g_A Tryptophan halogenase; 96.7 0.013 4.4E-07 60.6 12.9 51 280-333 196-250 (550)
352 1kdg_A CDH, cellobiose dehydro 96.6 0.00092 3.1E-08 69.3 3.3 36 57-92 6-41 (546)
353 2pyx_A Tryptophan halogenase; 96.6 0.013 4.5E-07 60.2 11.8 50 281-333 178-231 (526)
354 3dfz_A SIRC, precorrin-2 dehyd 96.5 0.0084 2.9E-07 53.8 8.8 107 222-374 30-140 (223)
355 3t37_A Probable dehydrogenase; 96.5 0.0014 4.9E-08 67.4 4.2 36 57-92 16-52 (526)
356 1pn0_A Phenol 2-monooxygenase; 96.5 0.015 5.1E-07 61.6 12.0 20 225-244 10-29 (665)
357 2weu_A Tryptophan 5-halogenase 96.4 0.016 5.5E-07 59.2 11.1 52 279-333 174-228 (511)
358 2h88_A Succinate dehydrogenase 96.4 0.028 9.5E-07 58.8 12.8 50 284-333 161-215 (621)
359 1ju2_A HydroxynitrIle lyase; f 96.3 0.002 6.8E-08 66.5 3.8 36 57-93 25-60 (536)
360 3q9t_A Choline dehydrogenase a 96.3 0.0029 9.9E-08 65.7 4.9 36 57-92 5-41 (577)
361 2bs2_A Quinol-fumarate reducta 96.2 0.034 1.2E-06 58.6 12.8 51 283-333 163-218 (660)
362 3kkj_A Amine oxidase, flavin-c 96.1 0.0043 1.5E-07 57.0 4.6 34 225-272 4-37 (336)
363 3qvp_A Glucose oxidase; oxidor 96.0 0.0043 1.5E-07 64.4 4.5 35 57-91 18-53 (583)
364 1chu_A Protein (L-aspartate ox 96.0 0.016 5.5E-07 59.7 8.7 46 287-332 147-205 (540)
365 1n4w_A CHOD, cholesterol oxida 95.9 0.0035 1.2E-07 64.2 3.2 37 58-94 5-41 (504)
366 3fwz_A Inner membrane protein 95.8 0.0064 2.2E-07 50.4 4.1 36 55-90 4-39 (140)
367 1coy_A Cholesterol oxidase; ox 95.8 0.0049 1.7E-07 63.1 4.0 38 56-93 9-46 (507)
368 3fim_B ARYL-alcohol oxidase; A 95.7 0.0041 1.4E-07 64.4 2.9 36 58-93 2-38 (566)
369 4gut_A Lysine-specific histone 95.7 0.082 2.8E-06 56.7 12.7 39 291-332 542-582 (776)
370 2jbv_A Choline oxidase; alcoho 95.6 0.0078 2.7E-07 62.2 4.3 37 57-93 12-49 (546)
371 1gpe_A Protein (glucose oxidas 95.5 0.0071 2.4E-07 63.0 3.8 37 57-93 23-60 (587)
372 3lk7_A UDP-N-acetylmuramoylala 95.4 0.027 9.1E-07 56.6 7.3 74 222-333 8-82 (451)
373 2g1u_A Hypothetical protein TM 95.3 0.0097 3.3E-07 50.2 3.4 36 56-91 17-52 (155)
374 1jnr_A Adenylylsulfate reducta 95.3 0.077 2.6E-06 55.9 11.0 48 286-333 159-216 (643)
375 4dgk_A Phytoene dehydrogenase; 94.9 0.014 4.9E-07 59.3 3.9 36 224-273 2-37 (501)
376 3fpz_A Thiazole biosynthetic e 94.8 0.017 5.7E-07 55.3 3.6 70 223-304 65-142 (326)
377 1vg0_A RAB proteins geranylger 94.8 0.019 6.5E-07 59.9 4.2 41 56-96 6-46 (650)
378 3llv_A Exopolyphosphatase-rela 94.7 0.018 6.1E-07 47.5 3.1 33 58-90 6-38 (141)
379 1lss_A TRK system potassium up 94.6 0.019 6.4E-07 47.1 3.2 33 58-90 4-36 (140)
380 3gyx_A Adenylylsulfate reducta 94.6 0.11 3.7E-06 54.8 9.6 50 284-333 172-231 (662)
381 3dfz_A SIRC, precorrin-2 dehyd 94.5 0.026 8.7E-07 50.7 3.8 34 57-90 30-63 (223)
382 3ic5_A Putative saccharopine d 94.5 0.02 6.7E-07 45.4 2.8 34 57-90 4-38 (118)
383 3eag_A UDP-N-acetylmuramate:L- 94.4 0.082 2.8E-06 50.5 7.5 72 223-333 4-76 (326)
384 1id1_A Putative potassium chan 94.4 0.026 8.8E-07 47.4 3.6 33 58-90 3-35 (153)
385 2x5o_A UDP-N-acetylmuramoylala 93.9 0.029 9.8E-07 56.2 3.3 35 58-92 5-39 (439)
386 3ihm_A Styrene monooxygenase A 93.8 0.047 1.6E-06 54.5 4.5 33 224-270 23-55 (430)
387 1kyq_A Met8P, siroheme biosynt 93.7 0.026 8.8E-07 52.3 2.3 34 57-90 12-45 (274)
388 2hmt_A YUAA protein; RCK, KTN, 93.4 0.036 1.2E-06 45.5 2.6 33 58-90 6-38 (144)
389 3c85_A Putative glutathione-re 93.4 0.043 1.5E-06 47.5 3.2 34 57-90 38-72 (183)
390 2iid_A L-amino-acid oxidase; f 93.3 0.069 2.4E-06 54.2 5.1 37 223-273 33-69 (498)
391 3oj0_A Glutr, glutamyl-tRNA re 93.3 0.075 2.6E-06 43.9 4.4 33 58-90 21-53 (144)
392 3nrn_A Uncharacterized protein 93.3 0.071 2.4E-06 52.8 4.9 34 225-272 2-35 (421)
393 1pjq_A CYSG, siroheme synthase 93.3 0.14 4.7E-06 51.4 7.0 71 222-332 11-81 (457)
394 4gde_A UDP-galactopyranose mut 93.2 0.074 2.5E-06 54.1 5.1 35 225-272 12-46 (513)
395 3fwz_A Inner membrane protein 93.1 0.16 5.6E-06 41.7 6.1 73 224-332 8-80 (140)
396 3lk7_A UDP-N-acetylmuramoylala 93.0 0.045 1.5E-06 54.9 3.0 35 57-91 8-42 (451)
397 3ka7_A Oxidoreductase; structu 92.9 0.084 2.9E-06 52.2 4.8 34 225-272 2-35 (425)
398 4dio_A NAD(P) transhydrogenase 92.7 0.067 2.3E-06 52.3 3.6 35 57-91 189-223 (405)
399 3dme_A Conserved exported prot 92.7 0.09 3.1E-06 50.6 4.6 33 225-271 6-38 (369)
400 2g1u_A Hypothetical protein TM 92.7 0.16 5.3E-06 42.6 5.5 36 222-271 18-53 (155)
401 3i6d_A Protoporphyrinogen oxid 92.6 0.079 2.7E-06 53.1 4.3 40 224-271 6-45 (470)
402 3g5s_A Methylenetetrahydrofola 92.6 0.099 3.4E-06 51.0 4.6 32 225-270 3-34 (443)
403 3k7m_X 6-hydroxy-L-nicotine ox 92.6 0.088 3E-06 52.2 4.5 34 225-272 3-36 (431)
404 1f0y_A HCDH, L-3-hydroxyacyl-C 92.4 0.083 2.8E-06 49.8 3.8 34 58-91 15-48 (302)
405 3nks_A Protoporphyrinogen oxid 92.3 0.096 3.3E-06 52.7 4.4 33 224-270 3-37 (477)
406 3llv_A Exopolyphosphatase-rela 92.2 0.25 8.5E-06 40.4 6.2 34 223-270 6-39 (141)
407 2b9w_A Putative aminooxidase; 92.2 0.11 3.9E-06 51.3 4.8 35 224-272 7-42 (424)
408 3l4b_C TRKA K+ channel protien 92.2 0.068 2.3E-06 47.7 2.8 32 59-90 1-32 (218)
409 2e1m_A L-glutamate oxidase; L- 92.1 0.13 4.4E-06 50.2 4.8 37 222-272 43-80 (376)
410 2gf3_A MSOX, monomeric sarcosi 92.0 0.12 4.1E-06 50.3 4.6 33 225-271 5-37 (389)
411 1c0p_A D-amino acid oxidase; a 91.8 0.15 5.3E-06 49.2 5.1 31 225-269 8-38 (363)
412 1rsg_A FMS1 protein; FAD bindi 91.8 0.12 4E-06 52.8 4.4 37 293-332 215-254 (516)
413 3p2y_A Alanine dehydrogenase/p 91.8 0.073 2.5E-06 51.7 2.6 35 57-91 183-217 (381)
414 3i83_A 2-dehydropantoate 2-red 91.8 0.095 3.3E-06 49.9 3.4 33 58-90 2-34 (320)
415 2gag_B Heterotetrameric sarcos 91.7 0.14 4.7E-06 50.2 4.6 32 225-270 23-56 (405)
416 3eag_A UDP-N-acetylmuramate:L- 91.5 0.1 3.5E-06 49.8 3.3 35 57-91 3-38 (326)
417 1s3e_A Amine oxidase [flavin-c 91.5 0.14 4.8E-06 52.2 4.6 34 224-271 5-38 (520)
418 3g3e_A D-amino-acid oxidase; F 91.4 0.16 5.4E-06 48.8 4.6 38 225-270 2-39 (351)
419 2jae_A L-amino acid oxidase; o 91.4 0.16 5.6E-06 51.3 4.9 35 224-272 12-46 (489)
420 4hv4_A UDP-N-acetylmuramate--L 91.3 0.31 1.1E-05 49.4 6.9 70 222-333 21-91 (494)
421 1pzg_A LDH, lactate dehydrogen 91.2 0.13 4.4E-06 49.2 3.7 34 58-91 9-43 (331)
422 2a9f_A Putative malic enzyme ( 91.1 0.1 3.5E-06 50.6 2.7 34 57-90 187-221 (398)
423 3ado_A Lambda-crystallin; L-gu 91.0 0.12 4.2E-06 48.9 3.3 34 58-91 6-39 (319)
424 2bcg_G Secretory pathway GDP d 90.9 0.18 6.1E-06 50.6 4.6 37 224-274 12-48 (453)
425 2yg5_A Putrescine oxidase; oxi 90.9 0.18 6.1E-06 50.4 4.6 34 224-271 6-39 (453)
426 2bi7_A UDP-galactopyranose mut 90.9 0.2 6.9E-06 49.0 4.8 35 225-273 5-39 (384)
427 1x13_A NAD(P) transhydrogenase 90.8 0.13 4.4E-06 50.7 3.4 34 58-91 172-205 (401)
428 3i83_A 2-dehydropantoate 2-red 90.8 0.58 2E-05 44.3 7.9 31 225-269 4-34 (320)
429 4e12_A Diketoreductase; oxidor 90.8 0.14 4.8E-06 47.8 3.4 34 58-91 4-37 (283)
430 4ffl_A PYLC; amino acid, biosy 90.8 0.14 4.8E-06 49.6 3.5 35 58-92 1-35 (363)
431 3dje_A Fructosyl amine: oxygen 90.7 0.21 7.1E-06 49.6 4.9 33 225-271 8-41 (438)
432 3ghy_A Ketopantoate reductase 90.7 0.54 1.9E-05 44.9 7.6 86 225-346 5-90 (335)
433 3hdq_A UDP-galactopyranose mut 90.6 0.21 7.1E-06 49.1 4.6 36 224-273 30-65 (397)
434 3hn2_A 2-dehydropantoate 2-red 90.6 0.11 3.8E-06 49.2 2.6 33 58-90 2-34 (312)
435 1lld_A L-lactate dehydrogenase 90.6 0.14 4.9E-06 48.5 3.3 33 58-90 7-41 (319)
436 3doj_A AT3G25530, dehydrogenas 90.5 0.16 5.5E-06 48.1 3.6 36 56-91 19-54 (310)
437 2ivd_A PPO, PPOX, protoporphyr 90.5 0.18 6.3E-06 50.6 4.3 34 224-271 17-50 (478)
438 1l7d_A Nicotinamide nucleotide 90.5 0.16 5.4E-06 49.7 3.6 35 57-91 171-205 (384)
439 2raf_A Putative dinucleotide-b 90.5 0.17 5.9E-06 44.8 3.5 36 57-92 18-53 (209)
440 1vl6_A Malate oxidoreductase; 90.4 0.12 4.2E-06 49.9 2.7 34 57-90 191-225 (388)
441 2vvm_A Monoamine oxidase N; FA 90.4 0.22 7.5E-06 50.4 4.7 35 224-272 40-74 (495)
442 1kyq_A Met8P, siroheme biosynt 90.4 0.19 6.6E-06 46.4 3.9 35 222-270 12-46 (274)
443 3lov_A Protoporphyrinogen oxid 90.3 0.24 8.1E-06 49.8 4.9 35 225-271 6-40 (475)
444 1sez_A Protoporphyrinogen oxid 90.3 0.22 7.5E-06 50.5 4.6 35 224-272 14-48 (504)
445 3k96_A Glycerol-3-phosphate de 90.1 0.23 7.8E-06 48.0 4.3 34 58-91 29-62 (356)
446 1id1_A Putative potassium chan 90.0 0.34 1.2E-05 40.3 4.9 33 224-270 4-36 (153)
447 2ew2_A 2-dehydropantoate 2-red 89.9 0.17 5.9E-06 47.7 3.3 33 58-90 3-35 (316)
448 3hwr_A 2-dehydropantoate 2-red 89.8 1.3 4.5E-05 41.8 9.4 87 224-346 20-106 (318)
449 1ks9_A KPA reductase;, 2-dehyd 89.7 0.2 6.9E-06 46.6 3.5 32 60-91 2-33 (291)
450 2z3y_A Lysine-specific histone 89.6 0.26 9E-06 52.0 4.7 36 222-271 106-141 (662)
451 3gg2_A Sugar dehydrogenase, UD 89.6 0.19 6.4E-06 50.3 3.4 33 59-91 3-35 (450)
452 1pjc_A Protein (L-alanine dehy 89.6 0.19 6.7E-06 48.6 3.4 33 58-90 167-199 (361)
453 3ego_A Probable 2-dehydropanto 89.5 0.84 2.9E-05 43.0 7.8 45 225-296 4-48 (307)
454 2xag_A Lysine-specific histone 89.5 0.28 9.5E-06 53.1 4.9 36 222-271 277-312 (852)
455 1pjq_A CYSG, siroheme synthase 89.5 0.16 5.6E-06 50.9 2.9 34 57-90 11-44 (457)
456 3vtf_A UDP-glucose 6-dehydroge 89.5 0.18 6.2E-06 50.0 3.1 39 53-91 16-54 (444)
457 3ego_A Probable 2-dehydropanto 89.4 0.24 8.3E-06 46.7 3.9 32 58-90 2-33 (307)
458 3axb_A Putative oxidoreductase 89.4 0.26 8.8E-06 49.1 4.3 30 225-268 25-55 (448)
459 2aef_A Calcium-gated potassium 89.4 0.22 7.4E-06 44.9 3.4 33 57-90 8-40 (234)
460 3qha_A Putative oxidoreductase 89.4 0.27 9.3E-06 46.1 4.2 34 58-91 15-48 (296)
461 3pvc_A TRNA 5-methylaminomethy 89.4 0.27 9.3E-06 52.1 4.6 34 224-271 265-298 (689)
462 3ic5_A Putative saccharopine d 89.3 0.4 1.4E-05 37.4 4.6 34 223-270 5-39 (118)
463 1lss_A TRK system potassium up 89.3 0.42 1.4E-05 38.7 4.8 33 224-270 5-37 (140)
464 2dpo_A L-gulonate 3-dehydrogen 89.2 0.21 7.2E-06 47.4 3.3 34 58-91 6-39 (319)
465 1i8t_A UDP-galactopyranose mut 89.2 0.27 9.4E-06 47.7 4.1 34 225-272 3-36 (367)
466 3k6j_A Protein F01G10.3, confi 89.2 0.29 9.9E-06 48.8 4.3 37 56-92 52-88 (460)
467 2hjr_A Malate dehydrogenase; m 89.0 0.26 8.8E-06 47.1 3.7 34 58-91 14-48 (328)
468 3hn2_A 2-dehydropantoate 2-red 89.0 0.71 2.4E-05 43.6 6.8 45 225-297 4-48 (312)
469 1zcj_A Peroxisomal bifunctiona 89.0 0.38 1.3E-05 48.3 5.1 35 57-91 36-70 (463)
470 1zej_A HBD-9, 3-hydroxyacyl-CO 88.9 0.28 9.5E-06 45.9 3.8 34 57-91 11-44 (293)
471 1v0j_A UDP-galactopyranose mut 88.9 0.35 1.2E-05 47.5 4.8 36 224-272 8-43 (399)
472 3ius_A Uncharacterized conserv 88.9 0.26 8.8E-06 45.7 3.6 34 57-90 4-37 (286)
473 4dll_A 2-hydroxy-3-oxopropiona 88.8 0.22 7.7E-06 47.3 3.2 34 57-90 30-63 (320)
474 1jw9_B Molybdopterin biosynthe 88.8 0.2 6.7E-06 45.8 2.6 34 58-91 31-65 (249)
475 3phh_A Shikimate dehydrogenase 88.7 0.28 9.5E-06 45.2 3.6 33 58-90 118-150 (269)
476 2y0c_A BCEC, UDP-glucose dehyd 88.7 0.24 8E-06 50.0 3.4 34 58-91 8-41 (478)
477 3ghy_A Ketopantoate reductase 88.6 0.25 8.6E-06 47.3 3.4 32 59-90 4-35 (335)
478 3g17_A Similar to 2-dehydropan 88.6 0.16 5.4E-06 47.7 1.9 34 58-91 2-35 (294)
479 3dtt_A NADP oxidoreductase; st 88.5 0.26 9E-06 44.8 3.3 36 56-91 17-52 (245)
480 3g79_A NDP-N-acetyl-D-galactos 88.4 1.5 5.1E-05 44.0 9.0 36 223-271 18-54 (478)
481 3ado_A Lambda-crystallin; L-gu 88.4 0.51 1.8E-05 44.6 5.3 37 223-273 6-42 (319)
482 2egg_A AROE, shikimate 5-dehyd 88.3 0.35 1.2E-05 45.4 4.2 34 57-90 140-174 (297)
483 1nyt_A Shikimate 5-dehydrogena 88.3 0.29 9.9E-06 45.3 3.5 34 57-90 118-151 (271)
484 3qha_A Putative oxidoreductase 88.2 0.59 2E-05 43.7 5.7 34 224-271 16-49 (296)
485 2eez_A Alanine dehydrogenase; 88.1 0.28 9.7E-06 47.6 3.4 33 58-90 166-198 (369)
486 2ewd_A Lactate dehydrogenase,; 88.1 0.26 8.7E-06 46.8 3.0 34 58-91 4-38 (317)
487 4dsg_A UDP-galactopyranose mut 88.0 0.44 1.5E-05 48.1 4.9 36 224-272 10-45 (484)
488 3g0o_A 3-hydroxyisobutyrate de 88.0 0.29 1E-05 46.0 3.4 34 57-90 6-39 (303)
489 1z82_A Glycerol-3-phosphate de 88.0 0.29 9.8E-06 46.9 3.3 35 56-90 12-46 (335)
490 2vns_A Metalloreductase steap3 87.9 0.28 9.7E-06 43.6 3.0 34 57-90 27-60 (215)
491 3pef_A 6-phosphogluconate dehy 87.8 0.29 9.9E-06 45.6 3.2 33 59-91 2-34 (287)
492 3g79_A NDP-N-acetyl-D-galactos 87.8 0.3 1E-05 49.1 3.4 35 58-92 18-54 (478)
493 3c85_A Putative glutathione-re 87.7 0.73 2.5E-05 39.5 5.5 35 223-270 39-73 (183)
494 2vhw_A Alanine dehydrogenase; 87.7 0.32 1.1E-05 47.4 3.4 34 57-90 167-200 (377)
495 2hmt_A YUAA protein; RCK, KTN, 87.5 0.47 1.6E-05 38.5 4.0 34 223-270 6-39 (144)
496 2v6b_A L-LDH, L-lactate dehydr 87.5 0.31 1.1E-05 45.9 3.2 32 59-90 1-34 (304)
497 3hwr_A 2-dehydropantoate 2-red 87.5 0.32 1.1E-05 46.2 3.3 33 57-90 18-50 (318)
498 1bg6_A N-(1-D-carboxylethyl)-L 87.4 0.32 1.1E-05 46.8 3.4 32 59-90 5-36 (359)
499 1evy_A Glycerol-3-phosphate de 87.4 0.38 1.3E-05 46.6 3.9 32 60-91 17-48 (366)
500 1dlj_A UDP-glucose dehydrogena 87.4 0.45 1.5E-05 46.8 4.4 31 60-91 2-32 (402)
No 1
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=1.3e-49 Score=410.83 Aligned_cols=328 Identities=40% Similarity=0.753 Sum_probs=283.8
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEE
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~ 135 (485)
..+++|||||||+||+++|..|++.+++|||||+++++.|+|+++.+..|.++++++..+++.++....-+++|+.++|+
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~~v~ 119 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAEAT 119 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEEEEE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEEEEE
Confidence 45679999999999999999999999999999999999999999999999999999999988887554444668999999
Q ss_pred EEecCCCEEEEecCCcc----------CCCCCceEEeecCEEEEccCCCCCCCCCCCCCCccccccChhHHHHHHHHHHH
Q 011476 136 KIDAENKKVYCRSSQNT----------NLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIE 205 (485)
Q Consensus 136 ~id~~~~~v~~~~~~~~----------~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 205 (485)
.||++.+.|.+++.... .....+..++.||+||||||+.|+.+++||++++++++++++++.++++.+..
T Consensus 120 ~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l~~ 199 (502)
T 4g6h_A 120 SINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAA 199 (502)
T ss_dssp EEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHHHH
T ss_pred EEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHHHHH
Confidence 99999999988653210 00112234899999999999999999999998899999999999999999999
Q ss_pred HHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHH
Q 011476 206 SFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAE 285 (485)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~ 285 (485)
+++.+.++...+++++..++++|||||++|+|+|.+|++++.+.+.+.+|.+....+|+++++.+++++.+++++++.++
T Consensus 200 ~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~~ 279 (502)
T 4g6h_A 200 NLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQ 279 (502)
T ss_dssp HHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHHH
T ss_pred HHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHHHH
Confidence 99998887777777788889999999999999999999999988888888877778999999999999999999999999
Q ss_pred HHHHhCCcEEEcCceEEEEeCCcEEEEE-cCCCe--EEEEecCeEEEccCCCCCcchHHHHHHhCC--CCCCceeeCCCc
Q 011476 286 EKFSRDGIDVKLGSMVVKVTDKEIFTKV-RGNGE--TSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWL 360 (485)
Q Consensus 286 ~~l~~~gV~v~~~~~v~~v~~~~v~~~~-~~~G~--~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~--~~~g~i~vd~~l 360 (485)
+.|++.||+++++++|++++++++.... ..+|+ ..+|++|+||||+|+.++|.+.++...+++ +.+|+|.||++|
T Consensus 280 ~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~~l 359 (502)
T 4g6h_A 280 SHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFL 359 (502)
T ss_dssp HHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCTTS
T ss_pred HHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECCcc
Confidence 9999999999999999999998866543 34554 246999999999997666666677777765 667899999999
Q ss_pred cccCCCCeEEeccccCCCCcchH
Q 011476 361 RVEGSDSIYALGDCATVNQRRVM 383 (485)
Q Consensus 361 ~t~~~~~Vya~GD~~~~~~~~~~ 383 (485)
|+++.|||||+|||+..+.++.+
T Consensus 360 q~~~~~~IfAiGD~a~~~~p~~a 382 (502)
T 4g6h_A 360 QVKGSNNIFAIGDNAFAGLPPTA 382 (502)
T ss_dssp BBTTCSSEEECGGGEESSSCCCH
T ss_pred ccCCCCCEEEEEcccCCCCCCch
Confidence 99889999999999987655443
No 2
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.3e-41 Score=340.07 Aligned_cols=277 Identities=23% Similarity=0.323 Sum_probs=237.3
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCccc-CCCccccccCcccccccccchHHHHhhCCCeEEEEEeEE
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF-TPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v 134 (485)
.++.||||||||+||++||..|...+++|+|||++++++| .|.++.+..+..+.+++.....+++++.++++ ..+++|
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~-~~~~~V 85 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKV-ITSEFA 85 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEE-ECSCCE
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEE-EeCCEE
Confidence 4567999999999999999999989999999999998877 47777777777777788888889999999886 356789
Q ss_pred EEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCCccccccChhHHHHHHHHHHHHHhhcCCCC
Q 011476 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPN 214 (485)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (485)
+.+|++.+.|.+.++. .+.||+||||||++|+.|++||.+ +++.+++.+++..++..+.
T Consensus 86 ~~id~~~~~v~~~~g~----------~~~yd~lvlAtG~~p~~p~i~G~~-~v~~~~~~~d~~~l~~~l~---------- 144 (385)
T 3klj_A 86 TSIDPNNKLVTLKSGE----------KIKYEKLIIASGSIANKIKVPHAD-EIFSLYSYDDALKIKDECK---------- 144 (385)
T ss_dssp EEEETTTTEEEETTSC----------EEECSEEEECCCEEECCCCCTTCS-CEECCSSHHHHHHHHHHHH----------
T ss_pred EEEECCCCEEEECCCC----------EEECCEEEEecCCCcCCCCCCCCC-CeEEeCCHHHHHHHHHHhh----------
Confidence 9999999999988765 899999999999999999999987 8888999999988877652
Q ss_pred CCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccccc-ccHHHHHHHHHHHHhCCc
Q 011476 215 LSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFSRDGI 293 (485)
Q Consensus 215 ~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~gV 293 (485)
.+++++|||||++|+|+|..|.+. |.+||++++.+++++. +++++.+.+.+.+++.||
T Consensus 145 -------~~~~vvVIGgG~~g~E~A~~l~~~--------------g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV 203 (385)
T 3klj_A 145 -------NKGKAFIIGGGILGIELAQAIIDS--------------GTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGI 203 (385)
T ss_dssp -------HHSCEEEECCSHHHHHHHHHHHHH--------------TCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTC
T ss_pred -------cCCeEEEECCCHHHHHHHHHHHhC--------------CCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCC
Confidence 457999999999999999999997 6899999999999886 899999999999999999
Q ss_pred EEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCCCCCCceeeCCCccccCCCCeEEecc
Q 011476 294 DVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGD 373 (485)
Q Consensus 294 ~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~~~~g~i~vd~~l~t~~~~~Vya~GD 373 (485)
++++++.++++ |++ ++||.||+|+| ..|++ .+++.+|+..+++|.||++++| +.|+|||+||
T Consensus 204 ~~~~~~~v~~i------------g~~--~~~D~vv~a~G--~~p~~-~~~~~~gl~~~~gi~vd~~~~t-~~~~IyA~GD 265 (385)
T 3klj_A 204 KIYTNSNFEEM------------GDL--IRSSCVITAVG--VKPNL-DFIKDTEIASKRGILVNDHMET-SIKDIYACGD 265 (385)
T ss_dssp EEECSCCGGGC------------HHH--HHHSEEEECCC--EEECC-GGGTTSCCCBSSSEEECTTCBC-SSTTEEECGG
T ss_pred EEEeCCEEEEc------------CeE--EecCeEEECcC--cccCh-hhhhhcCCCcCCCEEECCCccc-CCCCEEEEEe
Confidence 99999988776 443 89999999999 68888 6788889854556999999998 9999999999
Q ss_pred ccCCCC---cchHHHHHHHHhhc
Q 011476 374 CATVNQ---RRVMEDIAAIFSKA 393 (485)
Q Consensus 374 ~~~~~~---~~~~~~~~~~~~~a 393 (485)
|+..+. .....+..++..+|
T Consensus 266 ~a~~~~~~~~~~~~A~~qg~~aa 288 (385)
T 3klj_A 266 VAEFYGKNPGLINIANKQGEVAG 288 (385)
T ss_dssp GEEETTBCCCCHHHHHHHHHHHH
T ss_pred eEecCCCcccHHHHHHHHHHHHH
Confidence 997532 23444555554443
No 3
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=1.2e-40 Score=339.23 Aligned_cols=274 Identities=21% Similarity=0.345 Sum_probs=229.3
Q ss_pred CeEEEECCcHHHHHHHHhcCCCC--CcEEEEcCCCCcccC-CCccccccCccccc--ccccchHHHHhhCCCeEEEEEeE
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNPS--YDVQVISPRNYFAFT-PLLPSVTCGTVEAR--SIVEPVRNIVRKKNVDICFWEAE 133 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~g--~~V~lie~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~gv~v~~~~~~ 133 (485)
.|||||||||||++||.+|++.| .+|+|||+++++.|. ++++.+..+..... .+......++++.++++ ....+
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~ 79 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITV-KTYHE 79 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEE-EETEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEE-EeCCe
Confidence 37999999999999999998655 679999999887764 55665554443322 23334567778889886 36778
Q ss_pred EEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCCccccccChhHHHHHHHHHHHHHhhcCCC
Q 011476 134 CFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLP 213 (485)
Q Consensus 134 v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (485)
|+.+|+..+.+.+..+. .++..++.||+||||||++|+.|++|| ++.+.+++..++..++..+..
T Consensus 80 V~~id~~~~~~~~~~~~-----~~~~~~~~yd~lVIATGs~p~~p~i~g--~~~~~~~~~~~~~~l~~~~~~-------- 144 (437)
T 4eqs_A 80 VIAINDERQTVSVLNRK-----TNEQFEESYDKLILSPGASANSLGFES--DITFTLRNLEDTDAIDQFIKA-------- 144 (437)
T ss_dssp EEEEETTTTEEEEEETT-----TTEEEEEECSEEEECCCEEECCCCCCC--TTEECCSSHHHHHHHHHHHHH--------
T ss_pred EEEEEccCcEEEEEecc-----CCceEEEEcCEEEECCCCccccccccC--ceEEeeccHHHHHHHHHhhhc--------
Confidence 99999999998887654 334458999999999999999999998 456788899998888766532
Q ss_pred CCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCc
Q 011476 214 NLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGI 293 (485)
Q Consensus 214 ~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV 293 (485)
.++++++|||||++|+|+|..+.++ +.+||++++.+++++.+++++.+.+.+.+++.||
T Consensus 145 -------~~~~~vvViGgG~ig~E~A~~l~~~--------------g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV 203 (437)
T 4eqs_A 145 -------NQVDKVLVVGAGYVSLEVLENLYER--------------GLHPTLIHRSDKINKLMDADMNQPILDELDKREI 203 (437)
T ss_dssp -------HTCCEEEEECCSHHHHHHHHHHHHH--------------TCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTC
T ss_pred -------cCCcEEEEECCccchhhhHHHHHhc--------------CCcceeeeeeccccccccchhHHHHHHHhhccce
Confidence 3456999999999999999999998 6899999999999999999999999999999999
Q ss_pred EEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC--CCCCceeeCCCccccCCCCeEEe
Q 011476 294 DVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVEGSDSIYAL 371 (485)
Q Consensus 294 ~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~ 371 (485)
+++++++|++++++.+.+ ++|+. +++|.|++|+| ..||+ ++++..|+ +.+|+|.||+++|| +.|||||+
T Consensus 204 ~i~~~~~v~~~~~~~v~~---~~g~~--~~~D~vl~a~G--~~Pn~-~~~~~~gl~~~~~G~I~vd~~~~T-s~p~IyA~ 274 (437)
T 4eqs_A 204 PYRLNEEINAINGNEITF---KSGKV--EHYDMIIEGVG--THPNS-KFIESSNIKLDRKGFIPVNDKFET-NVPNIYAI 274 (437)
T ss_dssp CEEESCCEEEEETTEEEE---TTSCE--EECSEEEECCC--EEESC-GGGTTSSCCCCTTSCEECCTTCBC-SSTTEEEC
T ss_pred EEEeccEEEEecCCeeee---cCCeE--EeeeeEEEEec--eecCc-HHHHhhhhhhccCCcEecCCCccC-CCCCEEEE
Confidence 999999999999887654 46776 99999999999 78998 67888887 67889999999998 99999999
Q ss_pred ccccCCC
Q 011476 372 GDCATVN 378 (485)
Q Consensus 372 GD~~~~~ 378 (485)
|||+..+
T Consensus 275 GDva~~~ 281 (437)
T 4eqs_A 275 GDIATSH 281 (437)
T ss_dssp GGGEEEE
T ss_pred EEccCcc
Confidence 9998754
No 4
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=6.7e-40 Score=326.14 Aligned_cols=281 Identities=24% Similarity=0.397 Sum_probs=230.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccC-CCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT-PLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
..+|+|||||+||++||..|++.| +|+|||+++...|. ++++.+..+..+++++..+..+++++.++++ +...+|..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~-~~g~~v~~ 85 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEI-RLAEEAKL 85 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEE-ECSCCEEE
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEE-EECCEEEE
Confidence 469999999999999999999999 99999999887664 6666666666666777777788888888764 23457999
Q ss_pred EecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCC
Q 011476 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLS 216 (485)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (485)
+++..+.|. .++. ++.||+||||||++|+.|++|| .++++.+++..++.++++.+
T Consensus 86 id~~~~~V~-~~g~----------~~~~d~lViATGs~p~~p~i~G-~~~v~~~~~~~~~~~l~~~~------------- 140 (367)
T 1xhc_A 86 IDRGRKVVI-TEKG----------EVPYDTLVLATGARAREPQIKG-KEYLLTLRTIFDADRIKESI------------- 140 (367)
T ss_dssp EETTTTEEE-ESSC----------EEECSEEEECCCEEECCCCSBT-GGGEECCCSHHHHHHHHHHH-------------
T ss_pred EECCCCEEE-ECCc----------EEECCEEEECCCCCCCCCCCCC-cCCEEEEcCHHHHHHHHHHh-------------
Confidence 999888887 5543 8999999999999999999999 46677788888888776654
Q ss_pred HHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEE
Q 011476 217 DEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVK 296 (485)
Q Consensus 217 ~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~ 296 (485)
.++++++|||||++|+|+|..|.++ |.+||++++.+++++ +++++.+.+.+.+++.||+++
T Consensus 141 ----~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i~ 201 (367)
T 1xhc_A 141 ----ENSGEAIIIGGGFIGLELAGNLAEA--------------GYHVKLIHRGAMFLG-LDEELSNMIKDMLEETGVKFF 201 (367)
T ss_dssp ----HHHSEEEEEECSHHHHHHHHHHHHT--------------TCEEEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEEE
T ss_pred ----hcCCcEEEECCCHHHHHHHHHHHhC--------------CCEEEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEEE
Confidence 2346999999999999999999987 689999999999999 999999999999999999999
Q ss_pred cCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCCCCCCceeeCCCccccCCCCeEEeccccC
Q 011476 297 LGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGDCAT 376 (485)
Q Consensus 297 ~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~~~~g~i~vd~~l~t~~~~~Vya~GD~~~ 376 (485)
++++|++++.+.+.+ .+|+ +++|.|++|+| ..|++ .|++.+|+..+++|.||+++|| +.|+|||+|||+.
T Consensus 202 ~~~~v~~i~~~~v~~---~~g~---i~~D~vi~a~G--~~p~~-~ll~~~gl~~~~gi~Vd~~~~t-~~~~IyA~GD~a~ 271 (367)
T 1xhc_A 202 LNSELLEANEEGVLT---NSGF---IEGKVKICAIG--IVPNV-DLARRSGIHTGRGILIDDNFRT-SAKDVYAIGDCAE 271 (367)
T ss_dssp CSCCEEEECSSEEEE---TTEE---EECSCEEEECC--EEECC-HHHHHTTCCBSSSEECCTTSBC-SSTTEEECGGGEE
T ss_pred cCCEEEEEEeeEEEE---CCCE---EEcCEEEECcC--CCcCH-HHHHhCCCCCCCCEEECCCccc-CCCCEEEeEeeee
Confidence 999999998655433 4564 89999999999 78988 4888899844456999999998 9999999999986
Q ss_pred CCC---cchHHHHHHHHhhcc
Q 011476 377 VNQ---RRVMEDIAAIFSKAD 394 (485)
Q Consensus 377 ~~~---~~~~~~~~~~~~~a~ 394 (485)
... .....+..++..+|.
T Consensus 272 ~~~~~~~~~~~A~~qg~~aa~ 292 (367)
T 1xhc_A 272 YSGIIAGTAKAAMEQARVLAD 292 (367)
T ss_dssp BTTBCCCSHHHHHHHHHHHHH
T ss_pred cCCCCccHHHHHHHHHHHHHH
Confidence 422 234455555554443
No 5
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=1e-39 Score=330.12 Aligned_cols=273 Identities=22% Similarity=0.378 Sum_probs=230.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCc--EEEEcCCCCcccC--CCccccccCcccccccccchHHHHhhCCCeEEEEEeE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYD--VQVISPRNYFAFT--PLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAE 133 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~--V~lie~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~ 133 (485)
+++|||||||+||++||.+|++.|++ |+|||++++++|. ++...+..+......+ ....+++.+.++++ +..++
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~-~~~~~~~~~~~i~~-~~~~~ 79 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPI-LAEADWYGEARIDM-LTGPE 79 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCB-SSCTTHHHHTTCEE-EESCC
T ss_pred CCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHh-cCCHHHHHHCCCEE-EeCCE
Confidence 46999999999999999999988887 9999999988875 4445566666666666 56677788889876 34558
Q ss_pred EEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCC-CccccccChhHHHHHHHHHHHHHhhcCC
Q 011476 134 CFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASL 212 (485)
Q Consensus 134 v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (485)
|..+++..+.+.+.++. .+.||+||+|||++|+.|++||.+ ++++.+++.+++..++..+
T Consensus 80 v~~id~~~~~v~~~~g~----------~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~--------- 140 (410)
T 3ef6_A 80 VTALDVQTRTISLDDGT----------TLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSW--------- 140 (410)
T ss_dssp EEEEETTTTEEEETTSC----------EEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHC---------
T ss_pred EEEEECCCCEEEECCCC----------EEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHh---------
Confidence 99999999999987765 899999999999999999999986 6788888998888776543
Q ss_pred CCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccccc-ccHHHHHHHHHHHHhC
Q 011476 213 PNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFSRD 291 (485)
Q Consensus 213 ~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~ 291 (485)
..+++++|||+|++|+|+|..+.++ +.+|+++++.+++++. +++++.+.+.+.+++.
T Consensus 141 --------~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~ 198 (410)
T 3ef6_A 141 --------TSATRLLIVGGGLIGCEVATTARKL--------------GLSVTILEAGDELLVRVLGRRIGAWLRGLLTEL 198 (410)
T ss_dssp --------CTTCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHH
T ss_pred --------ccCCeEEEECCCHHHHHHHHHHHhC--------------CCeEEEEecCCccchhhcCHHHHHHHHHHHHHC
Confidence 2457999999999999999999986 6899999999998864 7899999999999999
Q ss_pred CcEEEcCceEEEEeCC-cEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCCCCCCceeeCCCccccCCCCeEE
Q 011476 292 GIDVKLGSMVVKVTDK-EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYA 370 (485)
Q Consensus 292 gV~v~~~~~v~~v~~~-~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~~~~g~i~vd~~l~t~~~~~Vya 370 (485)
||++++++.|++++.+ .+..+.+.+|++ ++||.||+|+| ..|++ .+++.+|+..+++|.||++++| +.|+|||
T Consensus 199 GV~i~~~~~v~~i~~~~~~~~v~~~dg~~--i~aD~Vv~a~G--~~p~~-~l~~~~gl~~~~gi~vd~~~~t-~~~~IyA 272 (410)
T 3ef6_A 199 GVQVELGTGVVGFSGEGQLEQVMASDGRS--FVADSALICVG--AEPAD-QLARQAGLACDRGVIVDHCGAT-LAKGVFA 272 (410)
T ss_dssp TCEEECSCCEEEEECSSSCCEEEETTSCE--EECSEEEECSC--EEECC-HHHHHTTCCBSSSEECCTTSBC-SSTTEEE
T ss_pred CCEEEeCCEEEEEeccCcEEEEEECCCCE--EEcCEEEEeeC--CeecH-HHHHhCCCccCCeEEEccCeeE-CCCCEEE
Confidence 9999999999999864 332333467875 99999999999 68888 6789999854466999999998 9999999
Q ss_pred eccccCCCC
Q 011476 371 LGDCATVNQ 379 (485)
Q Consensus 371 ~GD~~~~~~ 379 (485)
+|||+..+.
T Consensus 273 ~GD~a~~~~ 281 (410)
T 3ef6_A 273 VGDVASWPL 281 (410)
T ss_dssp CGGGEEEEB
T ss_pred EEcceeccC
Confidence 999998643
No 6
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=4.3e-39 Score=326.30 Aligned_cols=275 Identities=23% Similarity=0.390 Sum_probs=235.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCc--EEEEcCCCCcccC--CCccccccCcccccccccchHHHHhhCCCeEEEEEe
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYD--VQVISPRNYFAFT--PLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEA 132 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~--V~lie~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~ 132 (485)
++++|||||||+||++||.+|++.|++ |+|||+++.+.|. ++...+..+.....++.....+++.+.++++ +...
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~ 86 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEM-KLGA 86 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEE-EETC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEE-EeCC
Confidence 468999999999999999999998887 9999999988775 3444566666666677777788888999775 2445
Q ss_pred EEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCC-CccccccChhHHHHHHHHHHHHHhhcC
Q 011476 133 ECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKAS 211 (485)
Q Consensus 133 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (485)
++..+++..+.+.+.++. .+.||+||+|||+.|+.|++||.+ ++++.+++..++..+...+.
T Consensus 87 ~v~~id~~~~~v~~~~g~----------~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~------- 149 (415)
T 3lxd_A 87 EVVSLDPAAHTVKLGDGS----------AIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELD------- 149 (415)
T ss_dssp CEEEEETTTTEEEETTSC----------EEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHHH-------
T ss_pred EEEEEECCCCEEEECCCC----------EEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHhh-------
Confidence 899999999999987765 899999999999999999999986 67788889999888776542
Q ss_pred CCCCCHHHHhh-cccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccccc-ccHHHHHHHHHHHH
Q 011476 212 LPNLSDEERKR-ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFS 289 (485)
Q Consensus 212 ~~~~~~~~~~~-~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~ 289 (485)
. +++++|||+|++|+|+|..+.++ +.+|+++++.+++++. +++++.+.+.+.++
T Consensus 150 ----------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~ 205 (415)
T 3lxd_A 150 ----------AGAKNAVVIGGGYIGLEAAAVLTKF--------------GVNVTLLEALPRVLARVAGEALSEFYQAEHR 205 (415)
T ss_dssp ----------TTCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSTTTTTSCHHHHHHHHHHHH
T ss_pred ----------hcCCeEEEECCCHHHHHHHHHHHhc--------------CCeEEEEecCCchhhhhcCHHHHHHHHHHHH
Confidence 3 67999999999999999999987 6899999999999874 78999999999999
Q ss_pred hCCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCCCCCCceeeCCCccccCCCC
Q 011476 290 RDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDS 367 (485)
Q Consensus 290 ~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~~~~g~i~vd~~l~t~~~~~ 367 (485)
+.||++++++.|++++. +++..+.+.+|++ ++||.||+|+| ..|++ .+++.+|+..+++|.||++++| +.|+
T Consensus 206 ~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~--i~aD~Vv~a~G--~~p~~-~l~~~~gl~~~~gi~vd~~~~t-~~~~ 279 (415)
T 3lxd_A 206 AHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSV--IPADIVIVGIG--IVPCV-GALISAGASGGNGVDVDEFCRT-SLTD 279 (415)
T ss_dssp HTTCEEEETCCEEEEEESSSBEEEEEESSSCE--EECSEEEECSC--CEESC-HHHHHTTCCCSSSEECCTTCBC-SSTT
T ss_pred hCCCEEEECCEEEEEEecCCcEEEEEeCCCCE--EEcCEEEECCC--CccCh-HHHHhCCCCcCCCEEECCCCCc-CCCC
Confidence 99999999999999975 3565555577875 99999999999 68888 6788899854456999999998 9999
Q ss_pred eEEeccccCCCC
Q 011476 368 IYALGDCATVNQ 379 (485)
Q Consensus 368 Vya~GD~~~~~~ 379 (485)
|||+|||+..+.
T Consensus 280 iyA~GD~a~~~~ 291 (415)
T 3lxd_A 280 VYAIGDCAAHAN 291 (415)
T ss_dssp EEECGGGEEEEC
T ss_pred EEEEEeeeeecC
Confidence 999999998765
No 7
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=5.8e-39 Score=324.08 Aligned_cols=273 Identities=21% Similarity=0.423 Sum_probs=233.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCC--cEEEEcCCCCcccC--CCccccccCcccccccccchHHHHhhCCCeEEEEEeE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPRNYFAFT--PLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAE 133 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~--~V~lie~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~ 133 (485)
+++|||||||+||++||.+|++.|+ +|+|||+++.+.|. ++...+..+.....++.....+++.+.++++ ..++
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~--~~~~ 78 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIEL--ISDR 78 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEE--ECCC
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEE--EEEE
Confidence 3689999999999999999999998 89999999987774 3444566666666677777888888899775 3489
Q ss_pred EEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCC-CccccccChhHHHHHHHHHHHHHhhcCC
Q 011476 134 CFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASL 212 (485)
Q Consensus 134 v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (485)
+..+++..+.+.+.++. .+.||+||+|||+.|+.|++||.+ ++++.+++..++..+...+
T Consensus 79 v~~id~~~~~v~~~~g~----------~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~--------- 139 (404)
T 3fg2_P 79 MVSIDREGRKLLLASGT----------AIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRM--------- 139 (404)
T ss_dssp EEEEETTTTEEEESSSC----------EEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHG---------
T ss_pred EEEEECCCCEEEECCCC----------EEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHh---------
Confidence 99999999999987765 899999999999999999999986 6778888888887776654
Q ss_pred CCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccccc-ccHHHHHHHHHHHHhC
Q 011476 213 PNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFSRD 291 (485)
Q Consensus 213 ~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~ 291 (485)
..+++++|||+|++|+|+|..+.++ +.+|+++++.+++++. +++++.+.+.+.+++.
T Consensus 140 --------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~ 197 (404)
T 3fg2_P 140 --------PDKKHVVVIGAGFIGLEFAATARAK--------------GLEVDVVELAPRVMARVVTPEISSYFHDRHSGA 197 (404)
T ss_dssp --------GGCSEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHT
T ss_pred --------hcCCeEEEECCCHHHHHHHHHHHhC--------------CCEEEEEeCCCcchhhccCHHHHHHHHHHHHhC
Confidence 3567999999999999999999986 6899999999998874 7899999999999999
Q ss_pred CcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCCCCCCceeeCCCccccCCCCeE
Q 011476 292 GIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIY 369 (485)
Q Consensus 292 gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~~~~g~i~vd~~l~t~~~~~Vy 369 (485)
||++++++.|++++. +++..+.+.+|++ ++||.||+|+| ..|++ .|++.+|+..+++|.||++++| +.|+||
T Consensus 198 GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~--i~aD~Vv~a~G--~~p~~-~l~~~~gl~~~~Gi~vd~~~~t-~~~~iy 271 (404)
T 3fg2_P 198 GIRMHYGVRATEIAAEGDRVTGVVLSDGNT--LPCDLVVVGVG--VIPNV-EIAAAAGLPTAAGIIVDQQLLT-SDPHIS 271 (404)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEEETTSCE--EECSEEEECCC--EEECC-HHHHHTTCCBSSSEEECTTSBC-SSTTEE
T ss_pred CcEEEECCEEEEEEecCCcEEEEEeCCCCE--EEcCEEEECcC--CccCH-HHHHhCCCCCCCCEEECCCccc-CCCCEE
Confidence 999999999999975 3455555577875 99999999999 68888 6888899844455999999998 999999
Q ss_pred EeccccCCCC
Q 011476 370 ALGDCATVNQ 379 (485)
Q Consensus 370 a~GD~~~~~~ 379 (485)
|+|||+..+.
T Consensus 272 a~GD~a~~~~ 281 (404)
T 3fg2_P 272 AIGDCALFES 281 (404)
T ss_dssp ECGGGEEEEE
T ss_pred EeecceeecC
Confidence 9999998654
No 8
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=2e-39 Score=329.77 Aligned_cols=282 Identities=25% Similarity=0.392 Sum_probs=225.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCC--CCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNN--PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~--~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~ 135 (485)
.|+|||||||+||++||.+|++ .+++|||||+++++.|.|+++.+..+..+++++..++++++++.|++ |+.++|+
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~--~i~~~v~ 79 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIE--FINEKAE 79 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEE--EECSCEE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcE--EEEeEEE
Confidence 4689999999999999999984 45899999999999999999999999999999999999999988855 7889999
Q ss_pred EEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCC
Q 011476 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNL 215 (485)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (485)
.||++.++|+++++. ++.||+||||||+++. +++||.+++++.+++.+++.++++.+.+..
T Consensus 80 ~Id~~~~~V~~~~g~----------~i~YD~LViAtG~~~~-~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~-------- 140 (430)
T 3hyw_A 80 SIDPDANTVTTQSGK----------KIEYDYLVIATGPKLV-FGAEGQEENSTSICTAEHALETQKKLQELY-------- 140 (430)
T ss_dssp EEETTTTEEEETTCC----------EEECSEEEECCCCEEE-CCSBTHHHHSCCCSSHHHHHHHHHHHHHHH--------
T ss_pred EEECCCCEEEECCCC----------EEECCEEEEeCCCCcc-CCccCcccCcCCcccHHHHHHHHHHHHhhc--------
Confidence 999999999998775 8999999999999864 679998888899999999999998876542
Q ss_pred CHHHHhhcccEEEECCChhHH-------HHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc---ccccHHHHHHHH
Q 011476 216 SDEERKRILHFVIVGGGPTGV-------EFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL---NMFDKRITAFAE 285 (485)
Q Consensus 216 ~~~~~~~~~~vvVVGgG~~g~-------e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l---~~~~~~~~~~~~ 285 (485)
..+.++|+||++ |+ |+|..+..... +.. .+...+|++++..+.+. +...+...+.++
T Consensus 141 ------~~~~~vv~gg~~-gve~~~~~~e~a~~~~~~l~----~~g--~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~ 207 (430)
T 3hyw_A 141 ------ANPGPVVIGAIP-GVSCFGPAYEFALMLHYELK----KRG--IRYKVPMTFITSEPYLGHFGVGGIGASKRLVE 207 (430)
T ss_dssp ------HSCCCEEEEECT-TCCCCHHHHHHHHHHHHHHH----HTT--CGGGCCEEEECSSSSTTCTTTTCSTTHHHHHH
T ss_pred ------cCCceEEEeCCC-cEEEhHHHHHHHHHHHHHHH----Hhc--ccccceeeeecccchhhhccchhhHHHHHHHH
Confidence 223556666553 44 44444333221 111 12356899998877553 245667788899
Q ss_pred HHHHhCCcEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhC--C--CCCCceeeCCCcc
Q 011476 286 EKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVG--Q--TNRRALATDEWLR 361 (485)
Q Consensus 286 ~~l~~~gV~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g--~--~~~g~i~vd~~l~ 361 (485)
+.++++||++++++.|++++++++.+.. .+|+..++++|+++|++|+ .|+ .++...+ + +.+|.|.||++||
T Consensus 208 ~~l~~~GV~~~~~~~v~~v~~~~~~~~~-~~g~~~~i~~d~vi~~~G~--~~~--~~~~~~~~~l~~~~~g~i~vd~~lq 282 (430)
T 3hyw_A 208 DLFAERNIDWIANVAVKAIEPDKVIYED-LNGNTHEVPAKFTMFMPSF--QGP--EVVASAGDKVANPANKMVIVNRCFQ 282 (430)
T ss_dssp HHHHHTTCEEECSCEEEEECSSEEEEEC-TTSCEEEEECSEEEEECEE--ECC--HHHHTTCTTTBCTTTCCBCCCTTSB
T ss_pred HHHHhCCeEEEeCceEEEEeCCceEEEe-eCCCceEeecceEEEeccC--CCc--hHHHhcccccccCCceEEEeccccc
Confidence 9999999999999999999998887775 4566667999999999994 554 3444444 3 3456799999999
Q ss_pred ccCCCCeEEeccccCCC
Q 011476 362 VEGSDSIYALGDCATVN 378 (485)
Q Consensus 362 t~~~~~Vya~GD~~~~~ 378 (485)
++++|||||+|||+..+
T Consensus 283 ~t~~~~IfAiGD~a~~p 299 (430)
T 3hyw_A 283 NPTYKNIFGVGVVTAIP 299 (430)
T ss_dssp CSSSTTEEECSTTBCCC
T ss_pred CCCCCCEEEeccEEecC
Confidence 66999999999999865
No 9
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=1.9e-38 Score=320.49 Aligned_cols=267 Identities=24% Similarity=0.371 Sum_probs=214.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCC--cEEEEcCCCCcccC-C-CccccccCcccccccccchHHHHhhCCCeEEEEEe
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPRNYFAFT-P-LLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEA 132 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~--~V~lie~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~ 132 (485)
..++|+|||||+||+++|.+|++.|+ +|+|||+++.+.|. + +...+..+.. .+++.. + .+++.++++ +...
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~-~~~~~~v~~-~~~~ 80 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGD-AEKIRL--D-CKRAPEVEW-LLGV 80 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCC-GGGSBC--C-CTTSCSCEE-EETC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCc-hhhhhH--H-HHHHCCCEE-EcCC
Confidence 45799999999999999999998887 49999999877664 2 2222332322 222211 1 456678775 2445
Q ss_pred EEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCC-CCCCCccccccChhHHHHHHHHHHHHHhhcC
Q 011476 133 ECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNT-PGVEENCNFLKEVEDAQRIRRNVIESFEKAS 211 (485)
Q Consensus 133 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (485)
+|..++++.+.|.+.++. .+.||+||+|||++|+.|++ ||.+++++.+++.+++..++..+
T Consensus 81 ~v~~i~~~~~~v~~~~g~----------~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~-------- 142 (408)
T 2gqw_A 81 TAQSFDPQAHTVALSDGR----------TLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGL-------- 142 (408)
T ss_dssp CEEEEETTTTEEEETTSC----------EEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTC--------
T ss_pred EEEEEECCCCEEEECCCC----------EEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHh--------
Confidence 699999988899887654 89999999999999999999 99876777788888877665432
Q ss_pred CCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccccc-ccHHHHHHHHHHHHh
Q 011476 212 LPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFSR 290 (485)
Q Consensus 212 ~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~ 290 (485)
..+++++|||||++|+|+|..|.++ |.+||++++.+++++. +++++.+.+.+.+++
T Consensus 143 ---------~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~ 199 (408)
T 2gqw_A 143 ---------RPQSRLLIVGGGVIGLELAATARTA--------------GVHVSLVETQPRLMSRAAPATLADFVARYHAA 199 (408)
T ss_dssp ---------CTTCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSSSTTTSCHHHHHHHHHHHHH
T ss_pred ---------hcCCeEEEECCCHHHHHHHHHHHhC--------------CCEEEEEEeCCcccccccCHHHHHHHHHHHHH
Confidence 2357999999999999999999987 6899999999999884 899999999999999
Q ss_pred CCcEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCCCCCCceeeCCCccccCCCCeEE
Q 011476 291 DGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYA 370 (485)
Q Consensus 291 ~gV~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~~~~g~i~vd~~l~t~~~~~Vya 370 (485)
.||+++++++|++++ ++ .+. +.+|++ ++||.||+|+| ..|++ .+++.+|+..+++|.||+++|| +.|+|||
T Consensus 200 ~GV~i~~~~~v~~i~-~~-~v~-~~~g~~--i~~D~vi~a~G--~~p~~-~l~~~~gl~~~~gi~Vd~~~~t-~~~~IyA 270 (408)
T 2gqw_A 200 QGVDLRFERSVTGSV-DG-VVL-LDDGTR--IAADMVVVGIG--VLAND-ALARAAGLACDDGIFVDAYGRT-TCPDVYA 270 (408)
T ss_dssp TTCEEEESCCEEEEE-TT-EEE-ETTSCE--EECSEEEECSC--EEECC-HHHHHHTCCBSSSEECCTTCBC-SSTTEEE
T ss_pred cCcEEEeCCEEEEEE-CC-EEE-ECCCCE--EEcCEEEECcC--CCccH-HHHHhCCCCCCCCEEECCCCcc-CCCCEEE
Confidence 999999999999998 43 333 256765 99999999999 68888 6788888843345999999998 9999999
Q ss_pred eccccCCC
Q 011476 371 LGDCATVN 378 (485)
Q Consensus 371 ~GD~~~~~ 378 (485)
+|||+..+
T Consensus 271 ~GD~~~~~ 278 (408)
T 2gqw_A 271 LGDVTRQR 278 (408)
T ss_dssp CGGGEEEE
T ss_pred EEEEEEec
Confidence 99999864
No 10
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=3.5e-38 Score=320.66 Aligned_cols=273 Identities=23% Similarity=0.419 Sum_probs=222.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCC--cEEEEcCCCCcccC--CCccccccCcccccccccchHHHHhhCCCeEEEEEeE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPRNYFAFT--PLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAE 133 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~--~V~lie~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~ 133 (485)
.++|||||||+||+++|..|++.|+ +|+|||+++.+.|. ++...+..+....+.+.....+.+++.++++ +....
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~-~~~~~ 82 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQL-LGGTQ 82 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEE-ECSCC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEE-EeCCE
Confidence 5799999999999999999998888 79999998876663 2333344444444455445567788888775 24567
Q ss_pred EEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCC-Cc---cccccChhHHHHHHHHHHHHHhh
Q 011476 134 CFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-EN---CNFLKEVEDAQRIRRNVIESFEK 209 (485)
Q Consensus 134 v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~-~~---~~~~~~~~~~~~~~~~~~~~~~~ 209 (485)
|..+++..+.|.+.++. .+.||+||+|||++|+.|++||.+ .+ ++.+++.+++..+...+
T Consensus 83 v~~i~~~~~~v~~~~g~----------~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l------ 146 (431)
T 1q1r_A 83 VTAINRDRQQVILSDGR----------ALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQL------ 146 (431)
T ss_dssp EEEEETTTTEEEETTSC----------EEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTC------
T ss_pred EEEEECCCCEEEECCCC----------EEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHHh------
Confidence 89999988888886654 899999999999999999999975 34 67778888877665432
Q ss_pred cCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccccc-ccHHHHHHHHHHH
Q 011476 210 ASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKF 288 (485)
Q Consensus 210 ~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l 288 (485)
..+++++|||||++|+|+|..|.++ |.+|+++++.+.+++. +++++.+.+.+.+
T Consensus 147 -----------~~~~~vvViGgG~~g~E~A~~l~~~--------------G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l 201 (431)
T 1q1r_A 147 -----------IADNRLVVIGGGYIGLEVAATAIKA--------------NMHVTLLDTAARVLERVTAPPVSAFYEHLH 201 (431)
T ss_dssp -----------CTTCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSTTTTTSCHHHHHHHHHHH
T ss_pred -----------hcCCeEEEECCCHHHHHHHHHHHhC--------------CCEEEEEEeCCccccchhhHHHHHHHHHHH
Confidence 2457999999999999999999987 6899999999998875 8899999999999
Q ss_pred HhCCcEEEcCceEEEEeC----CcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCCCCCCceeeCCCccccC
Q 011476 289 SRDGIDVKLGSMVVKVTD----KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEG 364 (485)
Q Consensus 289 ~~~gV~v~~~~~v~~v~~----~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~~~~g~i~vd~~l~t~~ 364 (485)
++.||++++++.|++++. +++..+.+.+|+. ++||.||+|+| ..|++ .|++.+|+..+++|.||+++|| +
T Consensus 202 ~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~--i~~D~Vv~a~G--~~p~~-~l~~~~gl~~~~gi~Vd~~~~t-s 275 (431)
T 1q1r_A 202 REAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTR--LPADLVIAGIG--LIPNC-ELASAAGLQVDNGIVINEHMQT-S 275 (431)
T ss_dssp HHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCE--EECSEEEECCC--EEECC-HHHHHTTCCBSSSEECCTTSBC-S
T ss_pred HhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCE--EEcCEEEECCC--CCcCc-chhhccCCCCCCCEEECCCccc-C
Confidence 999999999999999975 3454444467765 99999999999 68888 6888899844456999999998 9
Q ss_pred CCCeEEeccccCCC
Q 011476 365 SDSIYALGDCATVN 378 (485)
Q Consensus 365 ~~~Vya~GD~~~~~ 378 (485)
.|+|||+|||+..+
T Consensus 276 ~~~IyA~GD~~~~~ 289 (431)
T 1q1r_A 276 DPLIMAVGDCARFH 289 (431)
T ss_dssp STTEEECGGGEEEE
T ss_pred CCCEEEEEeEEEEc
Confidence 99999999999864
No 11
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=6.3e-38 Score=321.19 Aligned_cols=291 Identities=21% Similarity=0.341 Sum_probs=231.3
Q ss_pred CeEEEECCcHHHHHHHHhcCCC--CCcEEEEcCCCCcccCCC-ccccccCcc---cccccccchHHHHhhCCCeEEEEEe
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTPL-LPSVTCGTV---EARSIVEPVRNIVRKKNVDICFWEA 132 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~--g~~V~lie~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~gv~v~~~~~ 132 (485)
+||+|||||+||+++|..|++. |++|+|||+++.+++.+. ++.+..+.. .+.++...+.+.+++.++++ +...
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~-~~~~ 79 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANV-QMRH 79 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEE-EESE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEE-EeCC
Confidence 5899999999999999999976 999999999987766542 333333332 35556666777888889876 3577
Q ss_pred EEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCC-CccccccChhHHHHHHHHHHHHHhhcC
Q 011476 133 ECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKAS 211 (485)
Q Consensus 133 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (485)
.+..++++.+.+.+.+.. +++...+.||+||+|||++|+.|++||.+ ++++.++++.++..+....
T Consensus 80 ~v~~i~~~~~~v~v~~~~-----~g~~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~-------- 146 (452)
T 2cdu_A 80 QVTNVDPETKTIKVKDLI-----TNEEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEA-------- 146 (452)
T ss_dssp EEEEEEGGGTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHHHHG--------
T ss_pred EEEEEEcCCCEEEEEecC-----CCceEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHHHHh--------
Confidence 899999888888886521 11123799999999999999999999986 5677788888877765542
Q ss_pred CCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc-cccHHHHHHHHHHHHh
Q 011476 212 LPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-MFDKRITAFAEEKFSR 290 (485)
Q Consensus 212 ~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~-~~~~~~~~~~~~~l~~ 290 (485)
..+++++|||||++|+|+|..+.++ |.+|+++++.+++++ .+++++.+.+.+.+++
T Consensus 147 ---------~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~ 203 (452)
T 2cdu_A 147 ---------PKAKTITIIGSGYIGAELAEAYSNQ--------------NYNVNLIDGHERVLYKYFDKEFTDILAKDYEA 203 (452)
T ss_dssp ---------GGCSEEEEECCSHHHHHHHHHHHTT--------------TCEEEEEESSSSTTTTTSCHHHHHHHHHHHHH
T ss_pred ---------ccCCeEEEECcCHHHHHHHHHHHhc--------------CCEEEEEEcCCchhhhhhhhhHHHHHHHHHHH
Confidence 2457999999999999999999986 689999999999998 7899999999999999
Q ss_pred CCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC--CCCCceeeCCCccccCCC
Q 011476 291 DGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVEGSD 366 (485)
Q Consensus 291 ~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~--~~~g~i~vd~~l~t~~~~ 366 (485)
.||+++++++|++++. +++..+.. +|++ +++|.||+|+| ..|++ .+++.. + +.+|+|.||+++|| +.|
T Consensus 204 ~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~--i~~D~vv~a~G--~~p~~-~ll~~~-l~~~~~G~i~Vd~~~~t-~~~ 275 (452)
T 2cdu_A 204 HGVNLVLGSKVAAFEEVDDEIITKTL-DGKE--IKSDIAILCIG--FRPNT-ELLKGK-VAMLDNGAIITDEYMHS-SNR 275 (452)
T ss_dssp TTCEEEESSCEEEEEEETTEEEEEET-TSCE--EEESEEEECCC--EEECC-GGGTTT-SCBCTTSCBCCCTTSBC-SST
T ss_pred CCCEEEcCCeeEEEEcCCCeEEEEEe-CCCE--EECCEEEECcC--CCCCH-HHHHHh-hhcCCCCCEEECCCcCc-CCC
Confidence 9999999999999975 34554443 5654 99999999999 78888 466655 5 56889999999998 999
Q ss_pred CeEEeccccCCCC---------cchHHHHHHHHhhcc
Q 011476 367 SIYALGDCATVNQ---------RRVMEDIAAIFSKAD 394 (485)
Q Consensus 367 ~Vya~GD~~~~~~---------~~~~~~~~~~~~~a~ 394 (485)
+|||+|||+..+. .....+..++..+|.
T Consensus 276 ~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~ 312 (452)
T 2cdu_A 276 DIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGL 312 (452)
T ss_dssp TEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHH
T ss_pred CEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHH
Confidence 9999999998531 234455555554443
No 12
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=1.7e-37 Score=327.04 Aligned_cols=276 Identities=24% Similarity=0.424 Sum_probs=226.7
Q ss_pred CeEEEECCcHHHHHHHHhcCCC--CCcEEEEcCCCCcccCC-CccccccCccc-ccc-cccchHHHHhhCCCeEEEEEeE
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTP-LLPSVTCGTVE-ARS-IVEPVRNIVRKKNVDICFWEAE 133 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~--g~~V~lie~~~~~~~~~-~~~~~~~~~~~-~~~-~~~~~~~~~~~~gv~v~~~~~~ 133 (485)
++|+|||||+||++||.+|++. +++|+|||+++.++|.+ .++.+..+... ... +......+.++.+++++ .+++
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~ 80 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVR-VKHE 80 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEE-TTEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEE-ECCE
Confidence 6999999999999999999965 89999999999988764 35555444433 222 44455556666887763 6789
Q ss_pred EEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCC-CccccccChhHHHHHHHHHHHHHhhcCC
Q 011476 134 CFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASL 212 (485)
Q Consensus 134 v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (485)
|+.+++..+.+.+.+.. +++...+.||+||||||++|+.|++||.+ .+++.+++..++..+.+.+..
T Consensus 81 V~~id~~~~~v~~~~~~-----~g~~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~------- 148 (565)
T 3ntd_A 81 VVAIDRAAKLVTVRRLL-----DGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQM------- 148 (565)
T ss_dssp EEEEETTTTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHHHHHH-------
T ss_pred EEEEECCCCEEEEEecC-----CCCeEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhh-------
Confidence 99999999999887522 22234799999999999999999999985 667788888887777655421
Q ss_pred CCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCC
Q 011476 213 PNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDG 292 (485)
Q Consensus 213 ~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~g 292 (485)
..+++++|||||++|+|+|..+.++ |.+|+++++.+++++.+++++...+.+.+++.|
T Consensus 149 --------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~G 206 (565)
T 3ntd_A 149 --------NNVEHATVVGGGFIGLEMMESLHHL--------------GIKTTLLELADQVMTPVDREMAGFAHQAIRDQG 206 (565)
T ss_dssp --------TTCSEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTT
T ss_pred --------CCCCEEEEECCCHHHHHHHHHHHhc--------------CCcEEEEEcCCccchhcCHHHHHHHHHHHHHCC
Confidence 3457999999999999999999987 689999999999999999999999999999999
Q ss_pred cEEEcCceEEEEeC---------------------CcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC--C
Q 011476 293 IDVKLGSMVVKVTD---------------------KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--T 349 (485)
Q Consensus 293 V~v~~~~~v~~v~~---------------------~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~--~ 349 (485)
|++++++.|++++. +.+.+.. .+|++ ++||.||+|+| ..|++ .+++.+|+ +
T Consensus 207 V~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~g~~--i~~D~vi~a~G--~~p~~-~l~~~~g~~~~ 280 (565)
T 3ntd_A 207 VDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTL-SNGEL--LETDLLIMAIG--VRPET-QLARDAGLAIG 280 (565)
T ss_dssp CEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEE-TTSCE--EEESEEEECSC--EEECC-HHHHHHTCCBC
T ss_pred CEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEE-cCCCE--EEcCEEEECcC--Cccch-HHHHhCCcccC
Confidence 99999999999964 2345444 56764 99999999999 78888 57788887 5
Q ss_pred CCCceeeCCCccccCCCCeEEeccccC
Q 011476 350 NRRALATDEWLRVEGSDSIYALGDCAT 376 (485)
Q Consensus 350 ~~g~i~vd~~l~t~~~~~Vya~GD~~~ 376 (485)
.+|+|.||+++|| +.|+|||+|||+.
T Consensus 281 ~~g~i~vd~~~~t-~~~~IyA~GD~~~ 306 (565)
T 3ntd_A 281 ELGGIKVNAMMQT-SDPAIYAVGDAVE 306 (565)
T ss_dssp TTSSBCCCTTCBC-SSTTEEECGGGBC
T ss_pred CCCCEEECCCccc-CCCCEEEeeeeEe
Confidence 6899999999998 9999999999985
No 13
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=7.6e-38 Score=320.47 Aligned_cols=290 Identities=18% Similarity=0.312 Sum_probs=221.2
Q ss_pred CeEEEECCcHHHHHHHHhcCCC--CCcEEEEcCCCCcccCC-CccccccCcc-cccccccchHHHHhhCCCeEEEEEeEE
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTP-LLPSVTCGTV-EARSIVEPVRNIVRKKNVDICFWEAEC 134 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~--g~~V~lie~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~gv~v~~~~~~v 134 (485)
+||+|||||+||++||.+|++. |++|+|||+++.++|.+ .++.+..+.. ...++.....+.+.++++++ +.+.+|
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~-~~~~~V 81 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQL-LLNREV 81 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEE-ECSCEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEE-EECCEE
Confidence 6999999999999999999966 99999999999988765 3444444433 34455565777888899776 367899
Q ss_pred EEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCC-CccccccChhHHHHHHHHHHHHHhhcCCC
Q 011476 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASLP 213 (485)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (485)
..+++..+.+.+... + +...+.||+||||||++|+.|++||.+ ++++.+++..++..+....
T Consensus 82 ~~id~~~~~v~v~~~------~-~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~---------- 144 (452)
T 3oc4_A 82 VAMDVENQLIAWTRK------E-EQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLL---------- 144 (452)
T ss_dssp EEEETTTTEEEEEET------T-EEEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHH----------
T ss_pred EEEECCCCEEEEEec------C-ceEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHH----------
Confidence 999999998887511 1 124899999999999999999999986 5666666666655443332
Q ss_pred CCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccccc-ccHHHHHHHHHHHHhCC
Q 011476 214 NLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFSRDG 292 (485)
Q Consensus 214 ~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~g 292 (485)
..+++++|||+|++|+|+|..+.++ |.+|+++++.+++++. +++++.+.+.+.+++.|
T Consensus 145 -------~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~G 203 (452)
T 3oc4_A 145 -------ENSQTVAVIGAGPIGMEAIDFLVKM--------------KKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQA 203 (452)
T ss_dssp -------HTCSEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTT
T ss_pred -------hcCCEEEEECCCHHHHHHHHHHHhC--------------CCeEEEEEccCccccccCCHHHHHHHHHHHHHcC
Confidence 2457999999999999999999987 6899999999999986 89999999999999999
Q ss_pred cEEEcCceEEEEe--CCcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHH-hCCCCCCceeeCCCccccCCCCeE
Q 011476 293 IDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQ-VGQTNRRALATDEWLRVEGSDSIY 369 (485)
Q Consensus 293 V~v~~~~~v~~v~--~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~-~g~~~~g~i~vd~~l~t~~~~~Vy 369 (485)
|++++++.|++++ ++++.+.. ++| + ++||.||+|+| ..|++ .+++. +.++.+|+|.||+++|| +.|+||
T Consensus 204 V~i~~~~~v~~i~~~~~~v~v~~-~~g-~--i~aD~Vv~A~G--~~p~~-~~l~~~~~~~~~g~i~vd~~~~t-~~~~Iy 275 (452)
T 3oc4_A 204 VIFHFEETVLGIEETANGIVLET-SEQ-E--ISCDSGIFALN--LHPQL-AYLDKKIQRNLDQTIAVDAYLQT-SVPNVF 275 (452)
T ss_dssp EEEEETCCEEEEEECSSCEEEEE-SSC-E--EEESEEEECSC--CBCCC-SSCCTTSCBCTTSCBCCCTTCBC-SSTTEE
T ss_pred CEEEeCCEEEEEEccCCeEEEEE-CCC-E--EEeCEEEECcC--CCCCh-HHHHhhhccCCCCCEEECcCccC-CCCCEE
Confidence 9999999999997 34564443 455 3 99999999999 68888 44443 33467899999999998 999999
Q ss_pred EeccccCCCC---------cchHHHHHHHHhhccc
Q 011476 370 ALGDCATVNQ---------RRVMEDIAAIFSKADK 395 (485)
Q Consensus 370 a~GD~~~~~~---------~~~~~~~~~~~~~a~~ 395 (485)
|+|||+..+. .....+..++..++..
T Consensus 276 A~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~ 310 (452)
T 3oc4_A 276 AIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANN 310 (452)
T ss_dssp ECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTS
T ss_pred EEEeeEEeccccCCceeecchHHHHHHHHHHHHHH
Confidence 9999998642 2345566666655543
No 14
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=5e-37 Score=324.71 Aligned_cols=280 Identities=24% Similarity=0.416 Sum_probs=230.9
Q ss_pred CCCCCeEEEECCcHHHHHHHHhcCCC--CCcEEEEcCCCCcccCC-CccccccCcccc-c-ccccchHHHHhhCCCeEEE
Q 011476 55 GIKKKKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTP-LLPSVTCGTVEA-R-SIVEPVRNIVRKKNVDICF 129 (485)
Q Consensus 55 ~~~~~~vvIIG~G~aGl~aA~~L~~~--g~~V~lie~~~~~~~~~-~~~~~~~~~~~~-~-~~~~~~~~~~~~~gv~v~~ 129 (485)
..++++|||||||+||++||.+|++. |++|+|||+++.++|.+ .++.+..+.... . .+...+..+.++.+++++
T Consensus 33 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~- 111 (588)
T 3ics_A 33 RWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIR- 111 (588)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEE-
T ss_pred cccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEE-
Confidence 34568999999999999999999966 89999999999988864 455555554332 2 255667777788898863
Q ss_pred EEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCC-C-CccccccChhHHHHHHHHHHHHH
Q 011476 130 WEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGV-E-ENCNFLKEVEDAQRIRRNVIESF 207 (485)
Q Consensus 130 ~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~-~-~~~~~~~~~~~~~~~~~~~~~~~ 207 (485)
.+++|+.++++.+.+.+.+.. +++...+.||+||+|||++|+.|++||. + .+++...+..++..+...+..
T Consensus 112 ~~~~V~~id~~~~~v~v~~~~-----~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~-- 184 (588)
T 3ics_A 112 VLSEVVKINKEEKTITIKNVT-----TNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDE-- 184 (588)
T ss_dssp CSEEEEEEETTTTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHH--
T ss_pred ECCEEEEEECCCCEEEEeecC-----CCCEEEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhh--
Confidence 678999999999999886521 2234478999999999999999999998 4 567778888888777665532
Q ss_pred hhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHH
Q 011476 208 EKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEK 287 (485)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~ 287 (485)
..+++++|||||++|+|+|..+.++ |.+|+++++.+++++.+++++.+.+.+.
T Consensus 185 -------------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~l~~~ 237 (588)
T 3ics_A 185 -------------KKPRHATVIGGGFIGVEMVENLRER--------------GIEVTLVEMANQVMPPIDYEMAAYVHEH 237 (588)
T ss_dssp -------------HCCSEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSSCTTSCHHHHHHHHHH
T ss_pred -------------cCCCeEEEECCCHHHHHHHHHHHhC--------------CCeEEEEecCCcccccCCHHHHHHHHHH
Confidence 2457999999999999999999987 6899999999999999999999999999
Q ss_pred HHhCCcEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC--CCCCceeeCCCccccCC
Q 011476 288 FSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVEGS 365 (485)
Q Consensus 288 l~~~gV~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~--~~~g~i~vd~~l~t~~~ 365 (485)
+++.||++++++.|++++.+.-.+.. .+|++ +++|.||+|+| ..|++ .+++.+|+ +.+|+|.||+++|| +.
T Consensus 238 l~~~GV~i~~~~~v~~i~~~~~~v~~-~~g~~--i~~D~Vi~a~G--~~p~~-~~l~~~g~~~~~~g~i~vd~~~~t-~~ 310 (588)
T 3ics_A 238 MKNHDVELVFEDGVDALEENGAVVRL-KSGSV--IQTDMLILAIG--VQPES-SLAKGAGLALGVRGTIKVNEKFQT-SD 310 (588)
T ss_dssp HHHTTCEEECSCCEEEEEGGGTEEEE-TTSCE--EECSEEEECSC--EEECC-HHHHHTTCCBCGGGCBCCCTTSBC-SS
T ss_pred HHHcCCEEEECCeEEEEecCCCEEEE-CCCCE--EEcCEEEEccC--CCCCh-HHHHhcCceEcCCCCEEECCcccc-CC
Confidence 99999999999999999863212222 46765 99999999999 78888 57888887 56799999999998 99
Q ss_pred CCeEEeccccC
Q 011476 366 DSIYALGDCAT 376 (485)
Q Consensus 366 ~~Vya~GD~~~ 376 (485)
|+|||+|||+.
T Consensus 311 ~~IyA~GD~~~ 321 (588)
T 3ics_A 311 PHIYAIGDAIE 321 (588)
T ss_dssp TTEEECGGGBC
T ss_pred CCEEEeeeeee
Confidence 99999999995
No 15
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=2e-37 Score=320.31 Aligned_cols=276 Identities=20% Similarity=0.335 Sum_probs=220.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCC---CcEEEEcCCCCcccCCC-ccccccCc-ccccccccchHHHHhhCCCeEEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPS---YDVQVISPRNYFAFTPL-LPSVTCGT-VEARSIVEPVRNIVRKKNVDICFWE 131 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g---~~V~lie~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~gv~v~~~~ 131 (485)
+.++|+|||||+||+++|..|++.| ++|+|||+++.+++.+. ++.+..+. ..+.++.....+.+++.++++ +..
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v-~~~ 112 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKV-YME 112 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEE-ETT
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEE-EeC
Confidence 3589999999999999999999877 99999999987766542 33223333 234455556677788889875 357
Q ss_pred eEEEEEecCCCEEEEe-cCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCC------------CccccccChhHHHH
Q 011476 132 AECFKIDAENKKVYCR-SSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE------------ENCNFLKEVEDAQR 198 (485)
Q Consensus 132 ~~v~~id~~~~~v~~~-~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~------------~~~~~~~~~~~~~~ 198 (485)
.+|..++++.+.+.+. ++. ...+.||+||||||++|+.|++||.+ ++++.++++.++..
T Consensus 113 ~~v~~i~~~~~~v~v~~~g~--------~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~ 184 (490)
T 2bc0_A 113 SPVQSIDYDAKTVTALVDGK--------NHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSAD 184 (490)
T ss_dssp CCEEEEETTTTEEEEEETTE--------EEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHH
T ss_pred CEEEEEECCCCEEEEEeCCc--------EEEEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHHHHH
Confidence 7799999988888886 431 13799999999999999999999975 45677788877776
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc-ccc
Q 011476 199 IRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-MFD 277 (485)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~-~~~ 277 (485)
+.+.+.+ ..+++++|||||++|+|+|..|.++ |.+||++++.+++++ .++
T Consensus 185 ~~~~~~~---------------~~~~~vvVIGgG~ig~E~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~ 235 (490)
T 2bc0_A 185 VIAKLEN---------------KDIKRVAVVGAGYIGVELAEAFQRK--------------GKEVVLIDVVDTCLAGYYD 235 (490)
T ss_dssp HHHHTTS---------------TTCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSTTTTTSC
T ss_pred HHHHhhh---------------cCCceEEEECCCHHHHHHHHHHHHC--------------CCeEEEEEcccchhhhHHH
Confidence 6554210 2457999999999999999999987 689999999999998 689
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEeCCc-EEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHh-CCCCCCcee
Q 011476 278 KRITAFAEEKFSRDGIDVKLGSMVVKVTDKE-IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV-GQTNRRALA 355 (485)
Q Consensus 278 ~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~~-v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~-g~~~~g~i~ 355 (485)
+++.+.+.+.+++.||+++++++|++++.++ +..+.. +|++ ++||.||+|+| ..|++ .+++.. .++.+|+|.
T Consensus 236 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~--i~~D~Vi~a~G--~~p~~-~ll~~~l~~~~~G~I~ 309 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIIT-DKNE--YDVDMVILAVG--FRPNT-TLGNGKIDLFRNGAFL 309 (490)
T ss_dssp HHHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEE-SSCE--EECSEEEECCC--EEECC-GGGTTCSCBCTTSCBC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCcE--EECCEEEECCC--CCcCh-HHHHhhhccCCCCCEE
Confidence 9999999999999999999999999998643 332222 4654 99999999999 78888 466555 225688999
Q ss_pred eCCCccccCCCCeEEeccccCC
Q 011476 356 TDEWLRVEGSDSIYALGDCATV 377 (485)
Q Consensus 356 vd~~l~t~~~~~Vya~GD~~~~ 377 (485)
||+++|| +.|+|||+|||+..
T Consensus 310 Vd~~~~t-~~~~IyA~GD~~~~ 330 (490)
T 2bc0_A 310 VNKRQET-SIPGVYAIGDCATI 330 (490)
T ss_dssp CCTTCBC-SSTTEEECGGGBCE
T ss_pred ECCCccc-CCCCEEEeeeeEEe
Confidence 9999998 99999999999975
No 16
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.6e-37 Score=317.86 Aligned_cols=272 Identities=26% Similarity=0.435 Sum_probs=208.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC--CCcEEEEcCCCCcccCC-CccccccCcccccccccchHHHH-hhCCCeEEEEEeE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTP-LLPSVTCGTVEARSIVEPVRNIV-RKKNVDICFWEAE 133 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~--g~~V~lie~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~gv~v~~~~~~ 133 (485)
+++|+|||||+||+++|+.|++. +++|+|||+++++++.+ .++.+..+.....++.....+.+ ++.++++ +..++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v-~~~~~ 81 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDL-HLNAE 81 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEE-ETTCE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEE-EecCE
Confidence 47999999999999999999965 89999999999888765 45555555444445444433334 6788875 34568
Q ss_pred EEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCC-CccccccChhHHHHHHHHHHHHHhhcCC
Q 011476 134 CFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASL 212 (485)
Q Consensus 134 v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (485)
|..+++....+.+.++ ...+.||+||+|||++|+.|++||.+ ++++..++..++..+......
T Consensus 82 v~~i~~~~~~v~~~~g---------~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~------- 145 (449)
T 3kd9_A 82 VIEVDTGYVRVRENGG---------EKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYMEK------- 145 (449)
T ss_dssp EEEECSSEEEEECSSS---------EEEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHSS-------
T ss_pred EEEEecCCCEEEECCc---------eEEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHHh-------
Confidence 9999887666654322 23799999999999999999999986 567777788887776654310
Q ss_pred CCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccccc-ccHHHHHHHHHHHHhC
Q 011476 213 PNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFSRD 291 (485)
Q Consensus 213 ~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~ 291 (485)
..+++++|||||++|+|+|..+.++ |.+|+++++.+++++. +++++.+.+.+.+++.
T Consensus 146 --------~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~ 203 (449)
T 3kd9_A 146 --------YKVENVVIIGGGYIGIEMAEAFAAQ--------------GKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH 203 (449)
T ss_dssp --------SCCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT
T ss_pred --------cCCCeEEEECCCHHHHHHHHHHHhC--------------CCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC
Confidence 2457999999999999999999987 6899999999999987 9999999999999999
Q ss_pred CcEEEcCceEEEEeCCc-EEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC--CCCCceeeCCCccccCCCCe
Q 011476 292 GIDVKLGSMVVKVTDKE-IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVEGSDSI 368 (485)
Q Consensus 292 gV~v~~~~~v~~v~~~~-v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~--~~~g~i~vd~~l~t~~~~~V 368 (485)
|++++++.+.+++.+. +..+. .+|++ +++|.||+|+| ..|++ .+++.+|+ +.+|+|.||+++|| +.|+|
T Consensus 204 -v~i~~~~~v~~i~~~~~v~~v~-~~g~~--i~~D~Vv~a~G--~~p~~-~l~~~~gl~~~~~G~i~vd~~~~t-~~~~I 275 (449)
T 3kd9_A 204 -VNLRLQEITMKIEGEERVEKVV-TDAGE--YKAELVILATG--IKPNI-ELAKQLGVRIGETGAIWTNEKMQT-SVENV 275 (449)
T ss_dssp -SEEEESCCEEEEECSSSCCEEE-ETTEE--EECSEEEECSC--EEECC-HHHHHTTCCBCTTSSBCCCTTCBC-SSTTE
T ss_pred -cEEEeCCeEEEEeccCcEEEEE-eCCCE--EECCEEEEeeC--CccCH-HHHHhCCccCCCCCCEEECCCCcc-CCCCE
Confidence 9999999999998653 33333 35654 99999999999 78888 67888887 66789999999998 99999
Q ss_pred EEeccccC
Q 011476 369 YALGDCAT 376 (485)
Q Consensus 369 ya~GD~~~ 376 (485)
||+|||+.
T Consensus 276 yA~GD~~~ 283 (449)
T 3kd9_A 276 YAAGDVAE 283 (449)
T ss_dssp EECSTTBC
T ss_pred EEeeeeee
Confidence 99999985
No 17
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=6.9e-37 Score=312.98 Aligned_cols=277 Identities=21% Similarity=0.372 Sum_probs=220.6
Q ss_pred CeEEEECCcHHHHHHHHhcCCC--CCcEEEEcCCCCcccCCC-ccccccCcc-cccccccchHHHHhhCCCeEEEEEeEE
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTPL-LPSVTCGTV-EARSIVEPVRNIVRKKNVDICFWEAEC 134 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~--g~~V~lie~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~gv~v~~~~~~v 134 (485)
+||||||||+||+++|..|++. |++|+|||+++.++|.+. ++.+..+.. .++++.....+.+++.++++ +....+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~-~~~~~v 79 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNV-FSNTEI 79 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEE-EETEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEE-EECCEE
Confidence 4899999999999999999965 999999999988776542 333333332 34556666777888889876 367889
Q ss_pred EEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCC-CccccccChhHHHHHHHHHHHHHhhcCCC
Q 011476 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASLP 213 (485)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (485)
..++++.+.|.+.+.. +++...+.||+||||||++|+.|++||.+ ++++.+++..++..+.+.+.+
T Consensus 80 ~~i~~~~~~v~~~~~~-----~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~-------- 146 (447)
T 1nhp_A 80 TAIQPKEHQVTVKDLV-----SGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVD-------- 146 (447)
T ss_dssp EEEETTTTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHHTC--------
T ss_pred EEEeCCCCEEEEEecC-----CCceEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHhhh--------
Confidence 9999998999886511 12223589999999999999999999986 567777788887776654310
Q ss_pred CCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc-cccHHHHHHHHHHHHhCC
Q 011476 214 NLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-MFDKRITAFAEEKFSRDG 292 (485)
Q Consensus 214 ~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~-~~~~~~~~~~~~~l~~~g 292 (485)
..+++++|||||++|+|+|..+.++ |.+|+++++.+.+++ .+++++.+.+.+.+++.|
T Consensus 147 -------~~~~~vvIiG~G~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~g 205 (447)
T 1nhp_A 147 -------PEVNNVVVIGSGYIGIEAAEAFAKA--------------GKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANN 205 (447)
T ss_dssp -------TTCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTT
T ss_pred -------cCCCeEEEECCCHHHHHHHHHHHHC--------------CCeEEEEecCcccccccCCHHHHHHHHHHHHhCC
Confidence 1456999999999999999999986 689999999999888 589999999999999999
Q ss_pred cEEEcCceEEEEeCC-cEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHh-CCCCCCceeeCCCccccCCCCeEE
Q 011476 293 IDVKLGSMVVKVTDK-EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV-GQTNRRALATDEWLRVEGSDSIYA 370 (485)
Q Consensus 293 V~v~~~~~v~~v~~~-~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~-g~~~~g~i~vd~~l~t~~~~~Vya 370 (485)
|++++++.|++++.+ ++..+.. +|++ +++|.||+|+| ..|++ .+++.. .++.+|+|.||+++|| +.|+|||
T Consensus 206 v~i~~~~~v~~i~~~~~v~~v~~-~~~~--i~~d~vi~a~G--~~p~~-~~~~~~~~~~~~G~i~Vd~~~~t-~~~~Iya 278 (447)
T 1nhp_A 206 ITIATGETVERYEGDGRVQKVVT-DKNA--YDADLVVVAVG--VRPNT-AWLKGTLELHPNGLIKTDEYMRT-SEPDVFA 278 (447)
T ss_dssp EEEEESCCEEEEECSSBCCEEEE-SSCE--EECSEEEECSC--EEESC-GGGTTTSCBCTTSCBCCCTTCBC-SSTTEEE
T ss_pred CEEEcCCEEEEEEccCcEEEEEE-CCCE--EECCEEEECcC--CCCCh-HHHHhhhhhcCCCcEEECccccC-CCCCEEE
Confidence 999999999999764 3322222 4543 99999999999 68887 455555 2256789999999998 8999999
Q ss_pred eccccCC
Q 011476 371 LGDCATV 377 (485)
Q Consensus 371 ~GD~~~~ 377 (485)
+|||+..
T Consensus 279 ~GD~~~~ 285 (447)
T 1nhp_A 279 VGDATLI 285 (447)
T ss_dssp CGGGSCE
T ss_pred eeeEEEe
Confidence 9999974
No 18
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=9.8e-37 Score=314.40 Aligned_cols=278 Identities=23% Similarity=0.407 Sum_probs=221.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC--CCcEEEEcCCCCcccCC-CccccccCcc-cccccccchHHHH-hhCCCeEEEEEe
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTP-LLPSVTCGTV-EARSIVEPVRNIV-RKKNVDICFWEA 132 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~--g~~V~lie~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~-~~~gv~v~~~~~ 132 (485)
+++|+|||||+||+++|..|++. |.+|+|||+++.++|.+ .++.+..+.. ...++.....+.+ +..++++ +...
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~-~~~~ 114 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDA-KVRH 114 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEE-ESSE
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEE-EeCC
Confidence 47999999999999999999864 99999999998876654 2444333332 2445555555555 4558775 3457
Q ss_pred EEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCC-CccccccChhHHHHHHHHHHHHHhhcC
Q 011476 133 ECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKAS 211 (485)
Q Consensus 133 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (485)
.|..++.+.+.+.+.+.. +++...+.||+||+|||++|+.|++||.+ ++++.+++.+++.++.+.+..
T Consensus 115 ~v~~i~~~~~~v~v~~~~-----~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~------ 183 (480)
T 3cgb_A 115 EVTKVDTEKKIVYAEHTK-----TKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLET------ 183 (480)
T ss_dssp EEEEEETTTTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHS------
T ss_pred EEEEEECCCCEEEEEEcC-----CCceEEEEcCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhh------
Confidence 899999988888886511 12223699999999999999999999986 567778888888877665421
Q ss_pred CCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhC
Q 011476 212 LPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRD 291 (485)
Q Consensus 212 ~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~ 291 (485)
..+++++|||||++|+|+|..+.++ +.+|+++++.+.+++.+++++.+.+.+.+++.
T Consensus 184 ---------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~ 240 (480)
T 3cgb_A 184 ---------NKVEDVTIIGGGAIGLEMAETFVEL--------------GKKVRMIERNDHIGTIYDGDMAEYIYKEADKH 240 (480)
T ss_dssp ---------SCCCEEEEECCHHHHHHHHHHHHHT--------------TCEEEEECCGGGTTSSSCHHHHHHHHHHHHHT
T ss_pred ---------cCCCeEEEECCCHHHHHHHHHHHhc--------------CCeEEEEEeCCchhhcCCHHHHHHHHHHHHHc
Confidence 1456999999999999999999987 68999999999999989999999999999999
Q ss_pred CcEEEcCceEEEEeCC-cEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC--CCCCceeeCCCccccCCCCe
Q 011476 292 GIDVKLGSMVVKVTDK-EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVEGSDSI 368 (485)
Q Consensus 292 gV~v~~~~~v~~v~~~-~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~--~~~g~i~vd~~l~t~~~~~V 368 (485)
||++++++.|++++.+ ++..+.. ++. +++||.||+|+| ..|++ .+++.+|+ +.+|+|.||+++|| +.|+|
T Consensus 241 Gv~i~~~~~v~~i~~~~~v~~v~~-~~~--~i~~D~vi~a~G--~~p~~-~~l~~~g~~~~~~G~I~Vd~~~~t-s~p~I 313 (480)
T 3cgb_A 241 HIEILTNENVKAFKGNERVEAVET-DKG--TYKADLVLVSVG--VKPNT-DFLEGTNIRTNHKGAIEVNAYMQT-NVQDV 313 (480)
T ss_dssp TCEEECSCCEEEEEESSBEEEEEE-TTE--EEECSEEEECSC--EEESC-GGGTTSCCCBCTTSCBCCCTTSBC-SSTTE
T ss_pred CcEEEcCCEEEEEEcCCcEEEEEE-CCC--EEEcCEEEECcC--CCcCh-HHHHhCCcccCCCCCEEECCCccC-CCCCE
Confidence 9999999999999754 3543433 344 399999999999 68887 57777777 56789999999998 89999
Q ss_pred EEeccccCC
Q 011476 369 YALGDCATV 377 (485)
Q Consensus 369 ya~GD~~~~ 377 (485)
||+|||+..
T Consensus 314 yA~GD~~~~ 322 (480)
T 3cgb_A 314 YAAGDCATH 322 (480)
T ss_dssp EECGGGBCE
T ss_pred EEeeeEEEe
Confidence 999999964
No 19
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=5.7e-37 Score=315.81 Aligned_cols=278 Identities=23% Similarity=0.379 Sum_probs=206.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC--CCcEEEEcCCCCcccCC-CccccccCccc-cccc-------ccchHHHHhhCCCe
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTP-LLPSVTCGTVE-ARSI-------VEPVRNIVRKKNVD 126 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~--g~~V~lie~~~~~~~~~-~~~~~~~~~~~-~~~~-------~~~~~~~~~~~gv~ 126 (485)
+++|+|||||+||++||.+|++. |++|+|||+++.++|.+ .++.+..+... ..++ ......+.++.+++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 47999999999999999999966 99999999999988764 45555444432 2223 23333444457877
Q ss_pred EEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCC-CccccccChhHHHHHHHHHHH
Q 011476 127 ICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIE 205 (485)
Q Consensus 127 v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~-~~~~~~~~~~~~~~~~~~~~~ 205 (485)
+ +.+++|..+++..+.+.+.+.. .++...+.||+||+|||++|+.|++||.+ ++++.+.+..++..+...+..
T Consensus 83 ~-~~~~~V~~id~~~~~v~~~~~~-----~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~ 156 (472)
T 3iwa_A 83 A-LVETRAHAIDRAAHTVEIENLR-----TGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISA 156 (472)
T ss_dssp E-ECSEEEEEEETTTTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHHHHHHHHHHCCT
T ss_pred E-EECCEEEEEECCCCEEEEeecC-----CCCEEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhhc
Confidence 6 3678999999999999887621 12234799999999999999999999985 567778888887666544310
Q ss_pred HHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc-cccHHHHHHH
Q 011476 206 SFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-MFDKRITAFA 284 (485)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~-~~~~~~~~~~ 284 (485)
..+++++|||+|++|+|+|..+.++. +.+|+++++.+++++ .+++++.+.+
T Consensus 157 ---------------~~~~~vvViGgG~~g~e~A~~l~~~~-------------g~~Vtlv~~~~~~l~~~~~~~~~~~l 208 (472)
T 3iwa_A 157 ---------------GEVSKAVIVGGGFIGLEMAVSLADMW-------------GIDTTVVELADQIMPGFTSKSLSQML 208 (472)
T ss_dssp ---------------TSCSEEEEECCSHHHHHHHHHHHHHH-------------CCEEEEECSSSSSSTTTSCHHHHHHH
T ss_pred ---------------CCCCEEEEECCCHHHHHHHHHHHHhc-------------CCcEEEEEccCcccccccCHHHHHHH
Confidence 13569999999999999999999861 479999999999999 8999999999
Q ss_pred HHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC--CCCCceeeCCCc
Q 011476 285 EEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWL 360 (485)
Q Consensus 285 ~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~--~~~g~i~vd~~l 360 (485)
.+.+++.||++++++.|++++. +.+.+.. .+|++ ++||.||+|+| ..|++ .|++.+|+ +.+|+|.||+++
T Consensus 209 ~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~-~~g~~--i~aD~Vv~a~G--~~p~~-~l~~~~gl~~~~~g~i~vd~~~ 282 (472)
T 3iwa_A 209 RHDLEKNDVVVHTGEKVVRLEGENGKVARVI-TDKRT--LDADLVILAAG--VSPNT-QLARDAGLELDPRGAIIVDTRM 282 (472)
T ss_dssp HHHHHHTTCEEECSCCEEEEEESSSBEEEEE-ESSCE--EECSEEEECSC--EEECC-HHHHHHTCCBCTTCCEECCTTC
T ss_pred HHHHHhcCCEEEeCCEEEEEEccCCeEEEEE-eCCCE--EEcCEEEECCC--CCcCH-HHHHhCCccCCCCCCEEECCCc
Confidence 9999999999999999999975 3455443 56764 99999999999 68888 57788887 568999999999
Q ss_pred cccCCCCeEEeccccC
Q 011476 361 RVEGSDSIYALGDCAT 376 (485)
Q Consensus 361 ~t~~~~~Vya~GD~~~ 376 (485)
|| +.|+|||+|||+.
T Consensus 283 ~t-~~~~Iya~GD~~~ 297 (472)
T 3iwa_A 283 RT-SDPDIFAGGDCVT 297 (472)
T ss_dssp BC-SSTTEEECGGGEE
T ss_pred cc-CCCCEEEecccee
Confidence 98 9999999999984
No 20
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=2.2e-36 Score=303.16 Aligned_cols=269 Identities=21% Similarity=0.377 Sum_probs=216.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCC--CcEEEEcCCCCcccC-CCccccccCccccccccc-chHHHHhhCCCeEEEEEeE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPS--YDVQVISPRNYFAFT-PLLPSVTCGTVEARSIVE-PVRNIVRKKNVDICFWEAE 133 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g--~~V~lie~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~gv~v~~~~~~ 133 (485)
+++|+|||||+||++||..|++.| .+|+|+|+++...|. ++++..........++.. .+..++++.++++ +...+
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~ 82 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARI-LTHTR 82 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEE-ECSCC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEE-EeCCE
Confidence 479999999999999999999888 569999998755443 444443333333344443 4566778888775 24677
Q ss_pred EEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCC-CccccccChhHHHHHHHHHHHHHhhcCC
Q 011476 134 CFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASL 212 (485)
Q Consensus 134 v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (485)
+..+++..+.+.+.+ ..+.||+||+|||++|+.|++||.+ ++++..++..++..++..+
T Consensus 83 v~~i~~~~~~v~~~~-----------~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~--------- 142 (384)
T 2v3a_A 83 VTGIDPGHQRIWIGE-----------EEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAA--------- 142 (384)
T ss_dssp CCEEEGGGTEEEETT-----------EEEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHH---------
T ss_pred EEEEECCCCEEEECC-----------cEEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhh---------
Confidence 899998888887642 1799999999999999999999986 5678888888877665544
Q ss_pred CCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccccc-ccHHHHHHHHHHHHhC
Q 011476 213 PNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFSRD 291 (485)
Q Consensus 213 ~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~ 291 (485)
..+++++|||+|++|+|+|..+.++ |.+|+++++.+.+++. +++++.+.+.+.+++.
T Consensus 143 --------~~~~~v~ViGgG~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~ 200 (384)
T 2v3a_A 143 --------AGKRRVLLLGAGLIGCEFANDLSSG--------------GYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGL 200 (384)
T ss_dssp --------TTCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTT
T ss_pred --------ccCCeEEEECCCHHHHHHHHHHHhC--------------CCeEEEEecCcchhhcccCHHHHHHHHHHHHHc
Confidence 2357999999999999999999987 6899999999998886 4889999999999999
Q ss_pred CcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCCC-CCCceeeCCCccccCCCCe
Q 011476 292 GIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQT-NRRALATDEWLRVEGSDSI 368 (485)
Q Consensus 292 gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~~-~~g~i~vd~~l~t~~~~~V 368 (485)
||+++++++|++++. +.+.+.. .+|++ +++|.||+|+| ..|++ .+++.+|+. .+| |.||+++|| +.|+|
T Consensus 201 gv~i~~~~~v~~i~~~~~~~~v~~-~~g~~--i~~d~vv~a~G--~~p~~-~l~~~~g~~~~~g-i~vd~~~~t-~~~~I 272 (384)
T 2v3a_A 201 GVRFHLGPVLASLKKAGEGLEAHL-SDGEV--IPCDLVVSAVG--LRPRT-ELAFAAGLAVNRG-IVVDRSLRT-SHANI 272 (384)
T ss_dssp TCEEEESCCEEEEEEETTEEEEEE-TTSCE--EEESEEEECSC--EEECC-HHHHHTTCCBSSS-EEECTTCBC-SSTTE
T ss_pred CCEEEeCCEEEEEEecCCEEEEEE-CCCCE--EECCEEEECcC--CCcCH-HHHHHCCCCCCCC-EEECCCCCC-CCCCE
Confidence 999999999999964 3344443 56765 99999999999 78888 578888883 355 999999997 99999
Q ss_pred EEeccccCC
Q 011476 369 YALGDCATV 377 (485)
Q Consensus 369 ya~GD~~~~ 377 (485)
||+|||+..
T Consensus 273 yA~GD~~~~ 281 (384)
T 2v3a_A 273 YALGDCAEV 281 (384)
T ss_dssp EECGGGEEE
T ss_pred EEeeeeeeE
Confidence 999999864
No 21
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=1e-36 Score=310.82 Aligned_cols=285 Identities=22% Similarity=0.340 Sum_probs=229.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCC---CCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNN---PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~---~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v 134 (485)
+++|||||||+||+++|..|++ .|++|+|||+++++.|.|.++.+..+....+++...+.+++++.|++ ++.++|
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~--~~~~~v 81 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIH--FIAQSA 81 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCE--EECSCE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCE--EEEeEE
Confidence 5799999999999999999998 89999999999999998888888888877788888899999999977 567899
Q ss_pred EEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCC---ccccccChhHHHHHHHHHHHHHhhcC
Q 011476 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEE---NCNFLKEVEDAQRIRRNVIESFEKAS 211 (485)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (485)
+.++++.+.|.+.++. .+.||+||+|||++|+.+++||.++ +.+.+++.+++.++++.+....
T Consensus 82 ~~id~~~~~V~~~~g~----------~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~---- 147 (437)
T 3sx6_A 82 EQIDAEAQNITLADGN----------TVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALL---- 147 (437)
T ss_dssp EEEETTTTEEEETTSC----------EEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHH----
T ss_pred EEEEcCCCEEEECCCC----------EEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHH----
Confidence 9999999999887654 7999999999999999999999863 5667888999988887664432
Q ss_pred CCCCCHHHHhhcccEEEECCChhH------HHHHHHHHHhhHHHHHhhCcCCCCCce-EEEEecCcccc----ccccHHH
Q 011476 212 LPNLSDEERKRILHFVIVGGGPTG------VEFAAELHDFVDEDLFKLYPKVKDSVK-ITLLEAADHIL----NMFDKRI 280 (485)
Q Consensus 212 ~~~~~~~~~~~~~~vvVVGgG~~g------~e~A~~l~~~~~~~~~~~~p~~~~g~~-Vtlv~~~~~~l----~~~~~~~ 280 (485)
..++++|||+|+++ +|+|..++....+. .++...+ |+++++.+.++ +.++ +.
T Consensus 148 ----------~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~------g~~~~~~~Vtlv~~~~~~~~~~l~~~~-~~ 210 (437)
T 3sx6_A 148 ----------REPGPIVIGAMAGASCFGPAYEYAMIVASDLKKR------GMRDKIPSFTFITSEPYIGHLGIQGVG-DS 210 (437)
T ss_dssp ----------HSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHT------TCGGGCSCEEEEESSSSTTCTTTTCCT-TH
T ss_pred ----------hCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHc------CCcccCcEEEEEcCCccccccccCcch-HH
Confidence 23367899986654 99997777654331 0001223 99999998773 3333 47
Q ss_pred HHHHHHHHHhCCcEEEcCceEEEEeCCcEEEEEc-CCCe---EEEEecCeEEEccCCCCCcchHHHHHHhCC-CCCCcee
Q 011476 281 TAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVR-GNGE---TSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALA 355 (485)
Q Consensus 281 ~~~~~~~l~~~gV~v~~~~~v~~v~~~~v~~~~~-~~G~---~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~-~~~g~i~ 355 (485)
...+++.+++.||+++++++|++|+++++.+... .+|+ ..++++|.+++++|+ .++. .+.+..++ +.+|+|.
T Consensus 211 ~~~~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~--~~~~-~~~~~~gl~~~~G~i~ 287 (437)
T 3sx6_A 211 KGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAF--KGVP-AVAGVEGLCNPGGFVL 287 (437)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCE--ECCH-HHHTSTTTBCTTSCBC
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCC--cCch-hhhccccccCCCCcEE
Confidence 8889999999999999999999999988776642 3432 346999999999994 4443 34444566 6789999
Q ss_pred eCCCccccCCCCeEEeccccCCC
Q 011476 356 TDEWLRVEGSDSIYALGDCATVN 378 (485)
Q Consensus 356 vd~~l~t~~~~~Vya~GD~~~~~ 378 (485)
||+++|+++.|||||+|||+..+
T Consensus 288 Vd~~l~t~~~~~Ifa~GD~~~~~ 310 (437)
T 3sx6_A 288 VDEHQRSKKYANIFAAGIAIAIP 310 (437)
T ss_dssp BCTTSBBSSCTTEEECGGGBCCC
T ss_pred eChhccCCCCCCEEEEEEEeccC
Confidence 99999988899999999999865
No 22
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.3e-36 Score=291.39 Aligned_cols=283 Identities=16% Similarity=0.157 Sum_probs=200.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCc----cccccC-cccccccccchHHHHhhCCCeEEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PSVTCG-TVEARSIVEPVRNIVRKKNVDICFWE 131 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~gv~v~~~~ 131 (485)
..+||+||||||||++||.+|++.|++|+|||+. .++++... +.++.. .....++.........+.+..+. ..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 82 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQ-YG 82 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEE-EC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeecccccCCcCCccccchHHHHHHHHHHHhhcccccc-ce
Confidence 4689999999999999999999999999999975 45554322 222111 11222444445556666665542 33
Q ss_pred eEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCCcc-ccccChhHHHHHHHHHHHHHhhc
Q 011476 132 AECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIESFEKA 210 (485)
Q Consensus 132 ~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 210 (485)
..+...+.....+...++. ++.||+||||||++|+.|++||.++.. ..+.... ..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~----------~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~--------~~~----- 139 (312)
T 4gcm_A 83 DIKSVEDKGEYKVINFGNK----------ELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCA--------VCD----- 139 (312)
T ss_dssp CCCEEEECSSCEEEECSSC----------EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCH--------HHH-----
T ss_pred eeeeeeeeecceeeccCCe----------EEEeceeEEcccCccCcCCCCChhhhCCccEEeee--------ccC-----
Confidence 4444445544454444333 899999999999999999999986321 1111110 000
Q ss_pred CCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHh
Q 011476 211 SLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSR 290 (485)
Q Consensus 211 ~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~ 290 (485)
....++|+++|||||++|+|+|..|.++ +.+||++++++++++... ...+.+++
T Consensus 140 -------~~~~~~k~vvViGgG~ig~E~A~~l~~~--------------g~~Vtlv~~~~~~~~~~~-----~~~~~~~~ 193 (312)
T 4gcm_A 140 -------GAFFKNKRLFVIGGGDSAVEEGTFLTKF--------------ADKVTIVHRRDELRAQRI-----LQDRAFKN 193 (312)
T ss_dssp -------GGGGTTCEEEEECCSHHHHHHHHHHTTT--------------CSEEEEECSSSSCCSCHH-----HHHHHHHC
T ss_pred -------ccccCCCEEEEECCCHHHHHHHHHHHhc--------------CCEEEEEecccccCcchh-----HHHHHHHh
Confidence 0013457999999999999999999987 689999999998876422 22356778
Q ss_pred CCcEEEcCceEEEEeCC-----cEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC-CCCCceeeCCCccccC
Q 011476 291 DGIDVKLGSMVVKVTDK-----EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALATDEWLRVEG 364 (485)
Q Consensus 291 ~gV~v~~~~~v~~v~~~-----~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~-~~~g~i~vd~~l~t~~ 364 (485)
.++.+.....+..+... ........+++...+++|.|++++| ..|++ .+++.+++ +++|+|.||+++|| |
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g--~~~~~-~~~~~~g~~~~~G~I~vd~~~~T-s 269 (312)
T 4gcm_A 194 DKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIG--MKPLT-APFKDLGITNDVGYIVTKDDMTT-S 269 (312)
T ss_dssp TTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSC--EEESC-GGGGGGTCBCTTSCBCCCTTSBC-S
T ss_pred cCcceeeecceeeeeccccccccceeeeecCCceeEEeeeeEEeecC--CCcCc-hhHHhcceecCCCeEeeCCCCcc-C
Confidence 89999888877766431 1233333456666799999999999 78888 67788888 67889999999998 9
Q ss_pred CCCeEEeccccCCCCcchHHHHHHHHhhcc
Q 011476 365 SDSIYALGDCATVNQRRVMEDIAAIFSKAD 394 (485)
Q Consensus 365 ~~~Vya~GD~~~~~~~~~~~~~~~~~~~a~ 394 (485)
+|||||+|||+..+...+..++.++..+|.
T Consensus 270 ~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~ 299 (312)
T 4gcm_A 270 VPGIFAAGDVRDKGLRQIVTATGDGSIAAQ 299 (312)
T ss_dssp STTEEECSTTBSCSCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEeecCCCcchHHHHHHHHHHHHHH
Confidence 999999999998666667778877766554
No 23
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=1.4e-35 Score=300.04 Aligned_cols=282 Identities=22% Similarity=0.326 Sum_probs=232.6
Q ss_pred CeEEEECCcHHHHHHHHhcCC---CCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEE
Q 011476 59 KKVVVLGTGWAGTSFLKNLNN---PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~---~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~ 135 (485)
++|||||||+||+++|.+|++ .|++|+|||+++.+.+.|.++....+....+++...+.+.+++.+++ ++.++|+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~~~v~ 79 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQ--FQEGTVE 79 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCE--EEECEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeE--EEEeeEE
Confidence 689999999999999999998 89999999999999998888888888888888989999999999977 4567999
Q ss_pred EEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCC
Q 011476 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNL 215 (485)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (485)
.++++.+.|.+.++. ++..++.||+||+|||+.|+.+++||.++....+.+.+++.++++.+...
T Consensus 80 ~i~~~~~~V~~~~g~------~~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~~--------- 144 (409)
T 3h8l_A 80 KIDAKSSMVYYTKPD------GSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESF--------- 144 (409)
T ss_dssp EEETTTTEEEEECTT------SCEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHHC---------
T ss_pred EEeCCCCEEEEccCC------cccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHHh---------
Confidence 999999999887753 12346999999999999999999999876667778888888888776431
Q ss_pred CHHHHhhcccEEEECCCh-------------------------hHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCc
Q 011476 216 SDEERKRILHFVIVGGGP-------------------------TGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (485)
Q Consensus 216 ~~~~~~~~~~vvVVGgG~-------------------------~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~ 270 (485)
.++++|||+|. .++|+|..+..+..+. .+++..+|+++++.+
T Consensus 145 -------~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~------g~~~~~~v~~~~~~~ 211 (409)
T 3h8l_A 145 -------QGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKK------GMLDKVHVTVFSPGE 211 (409)
T ss_dssp -------CSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTT------TCTTTEEEEEECSSS
T ss_pred -------cCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHc------CCCCCeEEEEEeCCc
Confidence 13677999992 5889998777654320 111236999999988
Q ss_pred cccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHh--CC
Q 011476 271 HILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV--GQ 348 (485)
Q Consensus 271 ~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~--g~ 348 (485)
+++.+++.+.+.+.+.+++.||+++++++|++++++++++ .+|++ +++|.||+++| ..|+ .+++.+ ++
T Consensus 212 -~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~v~~---~~g~~--~~~D~vi~a~G--~~~~--~~l~~~~~~l 281 (409)
T 3h8l_A 212 -YLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVD---EKGNT--IPADITILLPP--YTGN--PALKNSTPDL 281 (409)
T ss_dssp -SSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEECSSEEEE---TTSCE--EECSEEEEECC--EECC--HHHHTSCGGG
T ss_pred -cccccCHHHHHHHHHHHHHCCCEEEcCCceEEECCCeEEE---CCCCE--EeeeEEEECCC--CCcc--HHHHhccccC
Confidence 7788899999999999999999999999999999887443 46765 99999999999 4565 345666 55
Q ss_pred -CCCCceeeCCCccccCCCCeEEeccccCCCCc
Q 011476 349 -TNRRALATDEWLRVEGSDSIYALGDCATVNQR 380 (485)
Q Consensus 349 -~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~ 380 (485)
+.+|+|.||+++|+.+.|||||+|||+..+..
T Consensus 282 ~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~ 314 (409)
T 3h8l_A 282 VDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVP 314 (409)
T ss_dssp SCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCS
T ss_pred cCCCCCEEeCcccccCCCCCEEEeehhccCCCC
Confidence 67889999999998789999999999985433
No 24
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=6.2e-36 Score=291.52 Aligned_cols=286 Identities=16% Similarity=0.167 Sum_probs=198.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCC--Ccc------ccc--cCcccccccccchHHHHhhCCCe
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP--LLP------SVT--CGTVEARSIVEPVRNIVRKKNVD 126 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~--~~~------~~~--~~~~~~~~~~~~~~~~~~~~gv~ 126 (485)
..+||+||||||||++||.+|++.|++|+|||+....+..+ +++ .++ .......++...+...+.+.+++
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~ 82 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTT 82 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcE
Confidence 35899999999999999999999999999999875322211 111 010 11122345666677778888866
Q ss_pred EEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCC-ccccccChhHHHHHHHHHHH
Q 011476 127 ICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEE-NCNFLKEVEDAQRIRRNVIE 205 (485)
Q Consensus 127 v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~-~~~~~~~~~~~~~~~~~~~~ 205 (485)
+....+..+....+........ ..++.||+||||||+.|+.|++||.+. ....+.........
T Consensus 83 --~~~~~v~~~~~~~~~~~~~~~~--------~~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~~------ 146 (314)
T 4a5l_A 83 --IITETIDHVDFSTQPFKLFTEE--------GKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGA------ 146 (314)
T ss_dssp --EECCCEEEEECSSSSEEEEETT--------CCEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTT------
T ss_pred --EEEeEEEEeecCCCceEEEECC--------CeEEEEeEEEEcccccccccCCCccccccccceeeehhhhhh------
Confidence 4455566665554433322211 128999999999999999999999752 11222221111000
Q ss_pred HHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHH
Q 011476 206 SFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAE 285 (485)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~ 285 (485)
....++++++|||||++|+|+|..|.++ |.+||++++.+..... .....
T Consensus 147 ------------~~~~~~~~vvViGgG~ig~e~A~~l~~~--------------G~~Vt~v~~~~~~~~~-----~~~~~ 195 (314)
T 4a5l_A 147 ------------VPIFRNKVLMVVGGGDAAMEEALHLTKY--------------GSKVIILHRRDAFRAS-----KTMQE 195 (314)
T ss_dssp ------------SGGGTTSEEEEECSSHHHHHHHHHHTTT--------------SSEEEEECSSSSCCSC-----HHHHH
T ss_pred ------------hhhcCCCeEEEECCChHHHHHHHHHHHh--------------CCeeeeeccccccccc-----chhhh
Confidence 0013567999999999999999999987 7899999998765432 12334
Q ss_pred HHHHhCCcEEEcCceEEEEeCC-----cEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC-CCCCceeeCCC
Q 011476 286 EKFSRDGIDVKLGSMVVKVTDK-----EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALATDEW 359 (485)
Q Consensus 286 ~~l~~~gV~v~~~~~v~~v~~~-----~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~-~~~g~i~vd~~ 359 (485)
+.+...+++.+..+.+.++... .+.+.....++..++++|.|++|+| ..||+ ++++.... +++|.| ||++
T Consensus 196 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G--~~pn~-~~l~~~~~~~~~G~i-v~~~ 271 (314)
T 4a5l_A 196 RVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIG--HSPNS-KFLGGQVKTADDGYI-LTEG 271 (314)
T ss_dssp HHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSC--EEESC-GGGTTSSCBCTTSCB-CCBT
T ss_pred hhhcccceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecc--cccCh-hHhcccceEcCCeeE-eCCC
Confidence 5666778999999998888642 2455544455556799999999999 79999 55443323 555554 8889
Q ss_pred ccccCCCCeEEeccccCCCCcchHHHHHHHHhhcc
Q 011476 360 LRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKAD 394 (485)
Q Consensus 360 l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~a~ 394 (485)
+|| |.|||||+|||+..+..++..++.++..+|.
T Consensus 272 ~~T-s~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~ 305 (314)
T 4a5l_A 272 PKT-SVDGVFACGDVCDRVYRQAIVAAGSGCMAAL 305 (314)
T ss_dssp TBC-SSTTEEECSTTTCSSCCCHHHHHHHHHHHHH
T ss_pred Ccc-CCCCEEEEEeccCCcchHHHHHHHHHHHHHH
Confidence 998 9999999999999877677778877766553
No 25
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=4.5e-35 Score=298.04 Aligned_cols=283 Identities=23% Similarity=0.333 Sum_probs=220.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCC--CCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNN--PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~--~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~ 135 (485)
+++|||||||+||+++|.+|++ .|++|+|||+++.++|.|.++.+..+.....++...+.+++++.+++ ++.+++.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~--~~~~~v~ 79 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIE--FINEKAE 79 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEE--EECSCEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCE--EEEEEEE
Confidence 4799999999999999999997 89999999999999999888888778777778888888888888866 5678999
Q ss_pred EEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCC
Q 011476 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNL 215 (485)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (485)
.++++.+.+.+.++. .+.||+||+|||+.++.+++.. ......+.+.+++.++.+.+....
T Consensus 80 ~id~~~~~v~~~~g~----------~i~~d~liiAtG~~~~~pg~~~-~g~~~~~~~~~~a~~~~~~~~~~~-------- 140 (430)
T 3h28_A 80 SIDPDANTVTTQSGK----------KIEYDYLVIATGPKLVFGAEGQ-EENSTSICTAEHALETQKKLQELY-------- 140 (430)
T ss_dssp EEETTTTEEEETTCC----------EEECSEEEECCCCEEECCSBTH-HHHSCCCSSHHHHHHHHHHHHHHH--------
T ss_pred EEECCCCEEEECCCc----------EEECCEEEEcCCcccccCCCCC-cCCccCcCCHHHHHHHHHHHHHHH--------
Confidence 999999988887654 7999999999999987653221 123456778888888877654332
Q ss_pred CHHHHhhcccEEEECCChhH------HHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc----ccccHHHHHHHH
Q 011476 216 SDEERKRILHFVIVGGGPTG------VEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL----NMFDKRITAFAE 285 (485)
Q Consensus 216 ~~~~~~~~~~vvVVGgG~~g------~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l----~~~~~~~~~~~~ 285 (485)
..++++|||+|+++ +|+|..++....+. .++...+|+++++.+.+. +.++ .....+.
T Consensus 141 ------~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~------g~~~~~~V~~v~~~~~~~~~~l~~~~-~~~~~l~ 207 (430)
T 3h28_A 141 ------ANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKR------GIRYKVPMTFITSEPYLGHFGVGGIG-ASKRLVE 207 (430)
T ss_dssp ------HSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHT------TCGGGCCEEEECSSSSTTCTTTTCST-THHHHHH
T ss_pred ------hcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHc------CCccceEEEEecCCccccccccCcch-HHHHHHH
Confidence 23467899998754 99987776654321 011236899999988762 3333 4788889
Q ss_pred HHHHhCCcEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHH-hCC-CCCC-ceeeCCCccc
Q 011476 286 EKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQ-VGQ-TNRR-ALATDEWLRV 362 (485)
Q Consensus 286 ~~l~~~gV~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~-~g~-~~~g-~i~vd~~l~t 362 (485)
+.+++.||++++++.|++|+++++++... +++..++++|.|++++| ..|+. .+.+. .++ +.+| +|.||+++|+
T Consensus 208 ~~l~~~GV~i~~~~~v~~v~~~~v~~~~~-~~~g~~i~~D~vv~a~G--~~~~~-~l~~~~~gl~~~~G~~i~Vd~~l~t 283 (430)
T 3h28_A 208 DLFAERNIDWIANVAVKAIEPDKVIYEDL-NGNTHEVPAKFTMFMPS--FQGPE-VVASAGDKVANPANKMVIVNRCFQN 283 (430)
T ss_dssp HHHHHTTCEEECSCEEEEECSSEEEEECT-TSCEEEEECSEEEEECE--EECCH-HHHTTCTTTBCTTTCCBCCCTTSBC
T ss_pred HHHHHCCCEEEeCCEEEEEeCCeEEEEec-CCCceEEeeeEEEECCC--Cccch-hHhhccccCcCCCCCEEecCccccC
Confidence 99999999999999999999888766542 23344599999999999 45543 33322 466 6788 8999999998
Q ss_pred cCCCCeEEeccccCCC
Q 011476 363 EGSDSIYALGDCATVN 378 (485)
Q Consensus 363 ~~~~~Vya~GD~~~~~ 378 (485)
++.|||||+|||+..+
T Consensus 284 ~~~~~Ifa~GD~~~~~ 299 (430)
T 3h28_A 284 PTYKNIFGVGVVTAIP 299 (430)
T ss_dssp SSSTTEEECSTTBCCC
T ss_pred CCCCCEEEEEeeeccC
Confidence 8899999999999864
No 26
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=7.5e-36 Score=306.76 Aligned_cols=270 Identities=23% Similarity=0.324 Sum_probs=203.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCcccccc---------------------Ccccccccc---
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTC---------------------GTVEARSIV--- 113 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~---------------------~~~~~~~~~--- 113 (485)
.+||+||||||||+++|..|++.|++|+|||+++.+|+++......+ ...+...+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRK 83 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHH
Confidence 47999999999999999999999999999999888887533211110 001111111
Q ss_pred ---------cchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCC
Q 011476 114 ---------EPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE 184 (485)
Q Consensus 114 ---------~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~ 184 (485)
..+..++++.+++ +..+++..+++....+...++. ...+.||+||+|||+.|+.|++||.+
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~v~--~~~g~v~~id~~~~~V~~~~g~--------~~~~~~d~lviAtG~~p~~p~i~G~~ 153 (466)
T 3l8k_A 84 DYVQELRFKQHKRNMSQYETLT--FYKGYVKIKDPTHVIVKTDEGK--------EIEAETRYMIIASGAETAKLRLPGVE 153 (466)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEE--EESEEEEEEETTEEEEEETTSC--------EEEEEEEEEEECCCEEECCCCCTTGG
T ss_pred HhheeccccchHHHHHHhCCCE--EEEeEEEEecCCeEEEEcCCCc--------EEEEecCEEEECCCCCccCCCCCCcc
Confidence 2334455566755 6777899998765455444332 12399999999999999999999975
Q ss_pred CccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEE
Q 011476 185 ENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKIT 264 (485)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vt 264 (485)
+ +.+..+...++. .+. ..+++++|||||++|+|+|..+.++ |.+|+
T Consensus 154 -~---~~t~~~~~~~~~---------~l~-------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vt 199 (466)
T 3l8k_A 154 -Y---CLTSDDIFGYKT---------SFR-------KLPQDMVIIGAGYIGLEIASIFRLM--------------GVQTH 199 (466)
T ss_dssp -G---SBCHHHHHSTTC---------SCC-------SCCSEEEEECCSHHHHHHHHHHHHT--------------TCEEE
T ss_pred -c---eEeHHHHHHHHH---------HHh-------hCCCeEEEECCCHHHHHHHHHHHHc--------------CCEEE
Confidence 2 333333221110 111 1346999999999999999999987 68999
Q ss_pred EEecCccccccc-cHHHHHHHHHHHHhCCcEEEcCceEEEEeC---CcEEEEEcC-CCeEEEEecCeEEEccCCCCCcch
Q 011476 265 LLEAADHILNMF-DKRITAFAEEKFSRDGIDVKLGSMVVKVTD---KEIFTKVRG-NGETSSMPYGMVVWSTGIAPHAII 339 (485)
Q Consensus 265 lv~~~~~~l~~~-~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~---~~v~~~~~~-~G~~~~i~~D~vi~a~G~~~~p~~ 339 (485)
++++.+++++.+ ++++.+.+.+.++ |+++++++|++++. +.+.+.... +|+..++++|.|++|+| ..|++
T Consensus 200 lv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G--~~p~~ 274 (466)
T 3l8k_A 200 IIEMLDRALITLEDQDIVNTLLSILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAG--RRPVI 274 (466)
T ss_dssp EECSSSSSCTTSCCHHHHHHHHHHHC---CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCC--EEECC
T ss_pred EEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcC--CCccc
Confidence 999999999988 9999999988887 99999999999975 455554422 57655699999999999 78888
Q ss_pred HHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCC
Q 011476 340 KDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQ 379 (485)
Q Consensus 340 ~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~ 379 (485)
. | ++.+|+ +.+| |.||+++|| +.|+|||+|||+..+.
T Consensus 275 ~-l~l~~~gl~~~~~G-i~vd~~~~t-~~~~Iya~GD~~~~~~ 314 (466)
T 3l8k_A 275 P-EGAREIGLSISKTG-IVVDETMKT-NIPNVFATGDANGLAP 314 (466)
T ss_dssp C-TTTGGGTCCBCSSS-BCCCTTCBC-SSTTEEECGGGTCSCC
T ss_pred c-cchhhcCceeCCCC-EeECCCccC-CCCCEEEEEecCCCCc
Confidence 5 6 788887 5678 999999998 9999999999998644
No 27
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=3.6e-35 Score=301.99 Aligned_cols=284 Identities=18% Similarity=0.236 Sum_probs=205.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCc----ccc-----------------ccC-------cccc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PSV-----------------TCG-------TVEA 109 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~----~~~-----------------~~~-------~~~~ 109 (485)
.++|+|||||+||+++|.+|++.|++|+|||+++.+++++.. |.. ..+ ..+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 479999999999999999999999999999999877764221 100 000 0011
Q ss_pred ccc-----------ccchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 110 RSI-----------VEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 110 ~~~-----------~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
..+ ...+..++++.++++ +..++..+++....+...++ +...+.||+||+|||+.|+.|
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~--~~g~~~~i~~~~~~v~~~~G--------~~~~~~~d~lviAtG~~p~~p 151 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTY--YKGEGSFETAHSIRVNGLDG--------KQEMLETKKTIIATGSEPTEL 151 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EEEEEEEEETTEEEEEETTS--------CEEEEEEEEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEEEeeCCEEEEEecCC--------ceEEEEcCEEEECCCCCcCCC
Confidence 111 112345566778764 55556667764333333222 123799999999999999999
Q ss_pred CCCCCCC-ccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCC
Q 011476 179 NTPGVEE-NCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKV 257 (485)
Q Consensus 179 ~i~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~ 257 (485)
+++|.+. ++ .+..++.. +. ..+++++|||||++|+|+|..+.++
T Consensus 152 ~~~g~~~~~v---~t~~~~~~-------------~~-------~~~~~vvViGgG~~g~E~A~~l~~~------------ 196 (468)
T 2qae_A 152 PFLPFDEKVV---LSSTGALA-------------LP-------RVPKTMVVIGGGVIGLELGSVWARL------------ 196 (468)
T ss_dssp TTBCCCSSSE---ECHHHHHT-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHT------------
T ss_pred CCCCCCcCce---echHHHhh-------------cc-------cCCceEEEECCCHHHHHHHHHHHHh------------
Confidence 9998753 32 23332211 11 1236999999999999999999987
Q ss_pred CCCceEEEEecCccccccccHHHHHHHHHHH-HhCCcEEEcCceEEEEeCC--cEEEEEc-CCCeEEEEecCeEEEccCC
Q 011476 258 KDSVKITLLEAADHILNMFDKRITAFAEEKF-SRDGIDVKLGSMVVKVTDK--EIFTKVR-GNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 258 ~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l-~~~gV~v~~~~~v~~v~~~--~v~~~~~-~~G~~~~i~~D~vi~a~G~ 333 (485)
|.+|+++++.+++++.+++++.+.+.+.+ ++.||+++++++|++++.+ .+.+... .+|+..++++|.||+|+|
T Consensus 197 --g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G- 273 (468)
T 2qae_A 197 --GAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVG- 273 (468)
T ss_dssp --TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSC-
T ss_pred --CCEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCC-
Confidence 68999999999999999999999999999 9999999999999999753 3444321 256434599999999999
Q ss_pred CCCcchHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccC-CCCcchHHHHHHHHhh
Q 011476 334 APHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT-VNQRRVMEDIAAIFSK 392 (485)
Q Consensus 334 ~~~p~~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~-~~~~~~~~~~~~~~~~ 392 (485)
..|++..| ++.+|+ +.+|+|.||+++|| +.|+|||+|||+. .+.. ...+..++..+
T Consensus 274 -~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~~~-~~~A~~~g~~a 333 (468)
T 2qae_A 274 -RRPFTGGLGLDKINVAKNERGFVKIGDHFET-SIPDVYAIGDVVDKGPML-AHKAEDEGVAC 333 (468)
T ss_dssp -EEECCTTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGBSSSCSC-HHHHHHHHHHH
T ss_pred -cccCCCCCCchhcCCccCCCCCEeECCCccc-CCCCEEEeeccCCCCCcc-HhHHHHHHHHH
Confidence 78888433 788887 55789999999998 9999999999998 4432 34444444433
No 28
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=1.4e-34 Score=301.09 Aligned_cols=282 Identities=18% Similarity=0.272 Sum_probs=209.6
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCC----cccc--------------------ccCccc---
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPSV--------------------TCGTVE--- 108 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~----~~~~--------------------~~~~~~--- 108 (485)
...+||+|||||+||+++|++|++.|++|+|||+++.+++.+. .|.. ......
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 120 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVV 120 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhh
Confidence 3468999999999999999999999999999999986665421 1110 000000
Q ss_pred -ccccccch----H---HHH-----hhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCC
Q 011476 109 -ARSIVEPV----R---NIV-----RKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARA 175 (485)
Q Consensus 109 -~~~~~~~~----~---~~~-----~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~ 175 (485)
.+++...+ . .++ ++.++++ +.++++..+++ +.+.+. +. .+.||+||+|||+.|
T Consensus 121 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~-~~~~~v~~i~~--~~v~~~-g~----------~~~~d~lViATGs~p 186 (523)
T 1mo9_A 121 GIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEY-ILNCPAKVIDN--HTVEAA-GK----------VFKAKNLILAVGAGP 186 (523)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCE-EESSCCEEEET--TEEEET-TE----------EEEBSCEEECCCEEC
T ss_pred hHHHHHHHHHhhhhhhhhhhhhcccccCCcEE-EEeeEEEEeeC--CEEEEC-CE----------EEEeCEEEECCCCCC
Confidence 11222222 2 455 6778774 23778888876 566654 22 799999999999999
Q ss_pred CCCCCCCCCC-ccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhC
Q 011476 176 NTFNTPGVEE-NCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLY 254 (485)
Q Consensus 176 ~~~~i~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~ 254 (485)
+.|++||.+. +++ +..+.. . . +... .+++++|||||++|+|+|..+.++
T Consensus 187 ~~p~i~G~~~~~v~---~~~~~~---~------~---l~~~------~g~~vvViGgG~~g~E~A~~l~~~--------- 236 (523)
T 1mo9_A 187 GTLDVPGVNAKGVF---DHATLV---E------E---LDYE------PGSTVVVVGGSKTAVEYGCFFNAT--------- 236 (523)
T ss_dssp CCCCSTTTTSBTEE---EHHHHH---H------H---CCSC------CCSEEEEECCSHHHHHHHHHHHHT---------
T ss_pred CCCCCCCcccCcEe---eHHHHH---H------H---HHhc------CCCeEEEECCCHHHHHHHHHHHHc---------
Confidence 9999999863 233 222211 0 1 1111 226999999999999999999987
Q ss_pred cCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--Cc----EEEEEcCCCeEEEEecCeEE
Q 011476 255 PKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KE----IFTKVRGNGETSSMPYGMVV 328 (485)
Q Consensus 255 p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~----v~~~~~~~G~~~~i~~D~vi 328 (485)
|.+|+++++.+++++.+++++...+.+.+++.||++++++.|++++. ++ +.+.. .+|+ .+++||.||
T Consensus 237 -----G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~-~~G~-~~i~aD~Vv 309 (523)
T 1mo9_A 237 -----GRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMT-PNGE-MRIETDFVF 309 (523)
T ss_dssp -----TCEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEE-TTEE-EEEECSCEE
T ss_pred -----CCeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEE-CCCc-EEEEcCEEE
Confidence 68999999999999999999999999999999999999999999975 44 44443 5675 249999999
Q ss_pred EccCCCCCcchHHHHHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHhh
Q 011476 329 WSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSK 392 (485)
Q Consensus 329 ~a~G~~~~p~~~~l~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~ 392 (485)
+|+| ..|++..+++.+|+ +.+|+|.||+++|| +.|+|||+|||+..+.. ...+..++..+
T Consensus 310 ~A~G--~~p~~~~~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~~~~-~~~A~~~g~~a 371 (523)
T 1mo9_A 310 LGLG--EQPRSAELAKILGLDLGPKGEVLVNEYLQT-SVPNVYAVGDLIGGPME-MFKARKSGCYA 371 (523)
T ss_dssp ECCC--CEECCHHHHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGCSSCS-HHHHHHHHHHH
T ss_pred ECcC--CccCCccCHHHcCCccCCCCCEEECCCCcc-CCCCEEEEeecCCCccc-HHHHHHHHHHH
Confidence 9999 68888326788888 56889999999998 99999999999986542 44444444433
No 29
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=1.1e-34 Score=283.50 Aligned_cols=281 Identities=19% Similarity=0.259 Sum_probs=206.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCc----ccccc-CcccccccccchHHHHhhCCCeEEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PSVTC-GTVEARSIVEPVRNIVRKKNVDICFWE 131 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~gv~v~~~~ 131 (485)
++++|+|||||+||+++|++|++.|++|+|||++ +++.... ..++. ......++...+.+.+.++++++.+
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-- 89 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-- 89 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE--
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE--
Confidence 3579999999999999999999999999999998 4443221 11111 1123346667778888889988643
Q ss_pred eEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCC---ccccccChhHHHHHHHHHHHHHh
Q 011476 132 AECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEE---NCNFLKEVEDAQRIRRNVIESFE 208 (485)
Q Consensus 132 ~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~---~~~~~~~~~~~~~~~~~~~~~~~ 208 (485)
++|..++.+.+.+.+.... + ..+.||+||+|||+.|+.|++||.+. .........+
T Consensus 90 ~~v~~i~~~~~~~~v~~~~-----g---~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~------------- 148 (323)
T 3f8d_A 90 DIVEKIENRGDEFVVKTKR-----K---GEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVAD------------- 148 (323)
T ss_dssp SCEEEEEEC--CEEEEESS-----S---CEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHH-------------
T ss_pred EEEEEEEecCCEEEEEECC-----C---CEEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCC-------------
Confidence 8899998876654443321 1 18999999999999999999999763 1111111110
Q ss_pred hcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHH
Q 011476 209 KASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKF 288 (485)
Q Consensus 209 ~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l 288 (485)
.....+++++|||+|++|+|+|..|.+. +.+|+++++.+.+++ ++ ..+.+.+
T Consensus 149 ---------~~~~~~~~v~vvG~G~~~~e~a~~l~~~--------------g~~v~~~~~~~~~~~--~~---~~~~~~~ 200 (323)
T 3f8d_A 149 ---------APLFKNRVVAVIGGGDSALEGAEILSSY--------------STKVYLIHRRDTFKA--QP---IYVETVK 200 (323)
T ss_dssp ---------GGGGTTCEEEEECCSHHHHHHHHHHHHH--------------SSEEEEECSSSSCCS--CH---HHHHHHH
T ss_pred ---------HhHcCCCEEEEECCCHHHHHHHHHHHHh--------------CCeEEEEEeCCCCCc--CH---HHHHHHH
Confidence 0113457999999999999999999987 689999999998766 22 2233444
Q ss_pred HhCCcEEEcCceEEEEeCCc----EEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC--CCCCceeeCCCccc
Q 011476 289 SRDGIDVKLGSMVVKVTDKE----IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRV 362 (485)
Q Consensus 289 ~~~gV~v~~~~~v~~v~~~~----v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~--~~~g~i~vd~~l~t 362 (485)
++.||++++++.+++++.++ +.+....+|+..++++|.||+|+| ..|++ .+++.+|+ +.+|+|.||++++|
T Consensus 201 ~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G--~~p~~-~~~~~~g~~~~~~g~i~vd~~~~t 277 (323)
T 3f8d_A 201 KKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIG--FDPPT-DFAKSNGIETDTNGYIKVDEWMRT 277 (323)
T ss_dssp TCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCC--EECCH-HHHHHTTCCBCTTSSBCCCTTCBC
T ss_pred hCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEEC--CCCCh-hHHhhcCeeecCCCcEecCCCcee
Confidence 45699999999999997642 444443457766699999999999 68887 67888887 67899999999998
Q ss_pred cCCCCeEEeccccCCC--CcchHHHHHHHHhhcc
Q 011476 363 EGSDSIYALGDCATVN--QRRVMEDIAAIFSKAD 394 (485)
Q Consensus 363 ~~~~~Vya~GD~~~~~--~~~~~~~~~~~~~~a~ 394 (485)
+.|+|||+|||+..+ ...+..++.++..+|.
T Consensus 278 -~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~ 310 (323)
T 3f8d_A 278 -SVPGVFAAGDCTSAWLGFRQVITAVAQGAVAAT 310 (323)
T ss_dssp -SSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHH
T ss_pred -cCCCEEEcceecCCCCcccceeehhhHHHHHHH
Confidence 999999999999863 4456666666665543
No 30
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=3e-35 Score=305.81 Aligned_cols=284 Identities=20% Similarity=0.237 Sum_probs=202.1
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC--------CcccCCCccccc--------------------cC--
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN--------YFAFTPLLPSVT--------------------CG-- 105 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~--------~~~~~~~~~~~~--------------------~~-- 105 (485)
...+||+||||||||++||..|++.|++|+|||+.+ .+|+++...... .+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~ 109 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWK 109 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcc
Confidence 346899999999999999999999999999999854 455542211000 00
Q ss_pred -----ccccccccc-----------chHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEE
Q 011476 106 -----TVEARSIVE-----------PVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVI 169 (485)
Q Consensus 106 -----~~~~~~~~~-----------~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lvi 169 (485)
..+...+.. .+...++..+++ ++.+.+..+++.. +.+.+. +++.+.+.||+|||
T Consensus 110 ~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~--~i~g~a~~~d~~~--v~v~~~------~g~~~~i~~d~lVi 179 (519)
T 3qfa_A 110 VEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVV--YENAYGQFIGPHR--IKATNN------KGKEKIYSAERFLI 179 (519)
T ss_dssp CCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EECSEEEEEETTE--EEEECT------TCCCCEEEEEEEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEEEeeCCE--EEEEcC------CCCEEEEECCEEEE
Confidence 111111111 122345667765 6788898888754 444331 11224799999999
Q ss_pred ccCCCCCCCCCCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHH
Q 011476 170 AMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDED 249 (485)
Q Consensus 170 AtG~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~ 249 (485)
|||++|+.|++||.++.+. +..+ .+ .++. ..++++|||||++|+|+|..|.++
T Consensus 180 ATGs~p~~p~i~G~~~~~~---t~~~----------~~---~l~~-------~~~~vvVIGgG~ig~E~A~~l~~~---- 232 (519)
T 3qfa_A 180 ATGERPRYLGIPGDKEYCI---SSDD----------LF---SLPY-------CPGKTLVVGASYVALECAGFLAGI---- 232 (519)
T ss_dssp CCCEEECCCCCTTHHHHCB---CHHH----------HT---TCSS-------CCCSEEEECCSHHHHHHHHHHHHT----
T ss_pred ECCCCcCCCCCCCccCceE---cHHH----------Hh---hhhh-------cCCeEEEECCcHHHHHHHHHHHHc----
Confidence 9999999999999643322 1111 11 1222 234899999999999999999997
Q ss_pred HHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeC------CcEEE--EEcCCC-eEE
Q 011476 250 LFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD------KEIFT--KVRGNG-ETS 320 (485)
Q Consensus 250 ~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~------~~v~~--~~~~~G-~~~ 320 (485)
|.+||++++. .+++.+++++.+.+.+.|++.||++++++.++++.. +.+.+ .. .+| +..
T Consensus 233 ----------G~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~-~~g~~~~ 300 (519)
T 3qfa_A 233 ----------GLDVTVMVRS-ILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQS-TNSEEII 300 (519)
T ss_dssp ----------TCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEE-SSSSCEE
T ss_pred ----------CCeEEEEecc-cccccCCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEE-CCCcEEE
Confidence 6899999984 788999999999999999999999999988777743 23333 33 344 334
Q ss_pred EEecCeEEEccCCCCCcchHHH-HHHhCC--C-CCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHh
Q 011476 321 SMPYGMVVWSTGIAPHAIIKDF-MKQVGQ--T-NRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFS 391 (485)
Q Consensus 321 ~i~~D~vi~a~G~~~~p~~~~l-~~~~g~--~-~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~ 391 (485)
++++|.|++|+| ..|++..| ++.+|+ + .+|+|.||+++|| +.|+|||+|||+.........+..++..
T Consensus 301 ~~~~D~vi~a~G--~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~T-s~~~IyA~GD~~~g~~~~~~~A~~~g~~ 372 (519)
T 3qfa_A 301 EGEYNTVMLAIG--RDACTRKIGLETVGVKINEKTGKIPVTDEEQT-NVPYIYAIGDILEDKVELTPVAIQAGRL 372 (519)
T ss_dssp EEEESEEEECSC--EEESCSSSCSTTTTCCCCTTTCCBCCCTTSBC-SSTTEEECGGGBSSSCCCHHHHHHHHHH
T ss_pred EEECCEEEEecC--CcccCCCCChhhcCcEEcCCCCeEeeCCCCcc-CCCCEEEEEeccCCCCccHHHHHHHHHH
Confidence 689999999999 78988544 677777 4 4789999999998 9999999999995433334444444443
No 31
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=5.5e-35 Score=301.13 Aligned_cols=283 Identities=17% Similarity=0.234 Sum_probs=205.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccc----------------------cCc------cc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT----------------------CGT------VE 108 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~----------------------~~~------~~ 108 (485)
..++|+|||||+||+++|..|++.|++|+|||+++.+++.+...... .+. .+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLN 84 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccC
Confidence 35799999999999999999999999999999998776642111000 000 01
Q ss_pred ccccc-----------cchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCC
Q 011476 109 ARSIV-----------EPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (485)
Q Consensus 109 ~~~~~-----------~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~ 177 (485)
...+. ..+.+.+++.+++ ++.+++..++. +.+.+... +++...+.||+||+|||++|+.
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~~~~--~~~~v~~~------~gg~~~~~~d~lViAtGs~p~~ 154 (474)
T 1zmd_A 85 LDKMMEQKSTAVKALTGGIAHLFKQNKVV--HVNGYGKITGK--NQVTATKA------DGGTQVIDTKNILIATGSEVTP 154 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESEEEEEET--TEEEEECT------TSCEEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEEEecC--CEEEEEec------CCCcEEEEeCEEEECCCCCCCC
Confidence 11111 1134566778876 45666767765 34444321 1012379999999999999999
Q ss_pred CCCCCCCC-ccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcC
Q 011476 178 FNTPGVEE-NCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPK 256 (485)
Q Consensus 178 ~~i~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~ 256 (485)
|++||.+. .++ +..++. . +.. .+++++|||||++|+|+|..|.++
T Consensus 155 p~i~g~~~~~v~---t~~~~~----------~---~~~-------~~~~vvViGgG~~g~E~A~~l~~~----------- 200 (474)
T 1zmd_A 155 FPGITIDEDTIV---SSTGAL----------S---LKK-------VPEKMVVIGAGVIGVELGSVWQRL----------- 200 (474)
T ss_dssp CTTCCCCSSSEE---CHHHHT----------T---CSS-------CCSEEEEECCSHHHHHHHHHHHHT-----------
T ss_pred CCCCCCCcCcEE---cHHHHh----------h---ccc-------cCceEEEECCCHHHHHHHHHHHHc-----------
Confidence 99999753 222 222211 1 111 235999999999999999999987
Q ss_pred CCCCceEEEEecCccccc-cccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--c-EEEEE----cCCCeEEEEecCeEE
Q 011476 257 VKDSVKITLLEAADHILN-MFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--E-IFTKV----RGNGETSSMPYGMVV 328 (485)
Q Consensus 257 ~~~g~~Vtlv~~~~~~l~-~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~--~-v~~~~----~~~G~~~~i~~D~vi 328 (485)
|.+|+++++.+++++ .+++++.+.+.+.+++.||+++++++|++++.+ + +.+.. ..+++ ++++|.||
T Consensus 201 ---g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~--~i~~D~vv 275 (474)
T 1zmd_A 201 ---GADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAE--VITCDVLL 275 (474)
T ss_dssp ---TCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCE--EEEESEEE
T ss_pred ---CCEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCce--EEEcCEEE
Confidence 689999999999999 899999999999999999999999999999753 3 55442 13344 49999999
Q ss_pred EccCCCCCcchHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHhh
Q 011476 329 WSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSK 392 (485)
Q Consensus 329 ~a~G~~~~p~~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~ 392 (485)
+|+| ..|++..| ++++|+ +.+|+|.||+++|| +.|+|||+|||+..+.. ...+..++..+
T Consensus 276 ~a~G--~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~~-~~~A~~~g~~a 338 (474)
T 1zmd_A 276 VCIG--RRPFTKNLGLEELGIELDPRGRIPVNTRFQT-KIPNIYAIGDVVAGPML-AHKAEDEGIIC 338 (474)
T ss_dssp ECSC--EEECCTTSSHHHHTCCCCTTSCCCCCTTCBC-SSTTEEECGGGSSSCCC-HHHHHHHHHHH
T ss_pred ECcC--CCcCCCcCCchhcCCccCCCCCEEECcCCcc-CCCCEEEeeecCCCCcc-HHHHHHHHHHH
Confidence 9999 78888433 678887 55789999999997 99999999999986542 33444444433
No 32
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=4.1e-35 Score=301.27 Aligned_cols=271 Identities=21% Similarity=0.329 Sum_probs=198.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCc----ccc----------------c-cCc-----ccccc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PSV----------------T-CGT-----VEARS 111 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~----~~~----------------~-~~~-----~~~~~ 111 (485)
.+||+|||||+||+++|..|++.|++|+|||++ .+++.+.. |.. . .+. .+...
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGI 81 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHH
Confidence 369999999999999999999999999999998 44432211 100 0 000 01111
Q ss_pred -----------cccchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCC
Q 011476 112 -----------IVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNT 180 (485)
Q Consensus 112 -----------~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i 180 (485)
+...+.+.+++.++++ +...+..++. +.+.+... +++...+.||+||+|||+.|+.|++
T Consensus 82 ~~~~~~~~~~~l~~~l~~~~~~~gv~~--~~g~~~~id~--~~v~V~~~------~G~~~~~~~d~lViAtG~~~~~~~~ 151 (464)
T 2a8x_A 82 AYDRSRKVAEGRVAGVHFLMKKNKITE--IHGYGTFADA--NTLLVDLN------DGGTESVTFDNAIIATGSSTRLVPG 151 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEE--ECEEEEESSS--SEEEEEET------TSCCEEEEEEEEEECCCEEECCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEEEecC--CeEEEEeC------CCceEEEEcCEEEECCCCCCCCCCC
Confidence 1112345666778775 4444444443 44554321 1111379999999999999999999
Q ss_pred CCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCC
Q 011476 181 PGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS 260 (485)
Q Consensus 181 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g 260 (485)
+|.+.. +.+..++.. +. ..+++++|||||++|+|+|..+.++ |
T Consensus 152 ~g~~~~---~~~~~~~~~-------------~~-------~~~~~vvViGgG~~g~E~A~~l~~~--------------g 194 (464)
T 2a8x_A 152 TSLSAN---VVTYEEQIL-------------SR-------ELPKSIIIAGAGAIGMEFGYVLKNY--------------G 194 (464)
T ss_dssp CCCBTT---EECHHHHHT-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHT--------------T
T ss_pred CCCCce---EEecHHHhh-------------cc-------ccCCeEEEECCcHHHHHHHHHHHHc--------------C
Confidence 987543 223332211 11 1236999999999999999999987 6
Q ss_pred ceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--cEEEEEcCCCeEEEEecCeEEEccCCCCCcc
Q 011476 261 VKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGIAPHAI 338 (485)
Q Consensus 261 ~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~--~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~ 338 (485)
.+||++++.+++++.+++++.+.+.+.+++.||+++++++|++++.+ .+.+....+|+..++++|.|++|+| ..|+
T Consensus 195 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G--~~p~ 272 (464)
T 2a8x_A 195 VDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIG--FAPN 272 (464)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSC--EEEC
T ss_pred CeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCC--CCcc
Confidence 89999999999999999999999999999999999999999999753 3544432256444599999999999 6888
Q ss_pred hHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCC
Q 011476 339 IKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQ 379 (485)
Q Consensus 339 ~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~ 379 (485)
+..+ ++.+|+ +.+|+|.||+++|| +.|+|||+|||+..+.
T Consensus 273 ~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~ 315 (464)
T 2a8x_A 273 VEGYGLDKAGVALTDRKAIGVDDYMRT-NVGHIYAIGDVNGLLQ 315 (464)
T ss_dssp CSSSCHHHHTCCBCTTSSBCCCTTSBC-SSTTEEECGGGGCSSC
T ss_pred CCCCCchhcCCccCCCCCEeECcCCcc-CCCCEEEeECcCCCcc
Confidence 8433 788887 55789999999997 9999999999998644
No 33
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.4e-35 Score=301.14 Aligned_cols=282 Identities=20% Similarity=0.345 Sum_probs=203.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCC----cccc---------------c-cCc------ccccc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPSV---------------T-CGT------VEARS 111 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~----~~~~---------------~-~~~------~~~~~ 111 (485)
.++|+|||||+||+++|..|++.|++|+|||++ .+++++. .|.. . .+. .+...
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 81 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAK 81 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHH
Confidence 479999999999999999999999999999998 5554321 1100 0 000 01111
Q ss_pred -----------cccchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCC
Q 011476 112 -----------IVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNT 180 (485)
Q Consensus 112 -----------~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i 180 (485)
+...+...+++.+++ ++.+++..++.. .+.+.... + ...+.||+||+|||++|+.|++
T Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~id~~--~v~V~~~~-----G--~~~i~~d~lViATGs~p~~~~~ 150 (455)
T 1ebd_A 82 VQEWKASVVKKLTGGVEGLLKGNKVE--IVKGEAYFVDAN--TVRVVNGD-----S--AQTYTFKNAIIATGSRPIELPN 150 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCE--EEESEEEEEETT--EEEEEETT-----E--EEEEECSEEEECCCEEECCBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEEEccCC--eEEEEeCC-----C--cEEEEeCEEEEecCCCCCCCCC
Confidence 111234566777876 455666667653 44443211 1 1379999999999999999999
Q ss_pred CCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCC
Q 011476 181 PGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS 260 (485)
Q Consensus 181 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g 260 (485)
+|.+.. +.+..++.. +. ..+++++|||||++|+|+|..|.++ |
T Consensus 151 ~g~~~~---v~~~~~~~~-------------~~-------~~~~~vvViGgG~~g~e~A~~l~~~--------------g 193 (455)
T 1ebd_A 151 FKFSNR---ILDSTGALN-------------LG-------EVPKSLVVIGGGYIGIELGTAYANF--------------G 193 (455)
T ss_dssp BCCCSS---EECHHHHHT-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHT--------------T
T ss_pred CCccce---EecHHHHhc-------------cc-------cCCCeEEEECCCHHHHHHHHHHHHc--------------C
Confidence 887543 223322211 11 1236999999999999999999987 6
Q ss_pred ceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--cEEEEEcCCCeEEEEecCeEEEccCCCCCcc
Q 011476 261 VKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGIAPHAI 338 (485)
Q Consensus 261 ~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~--~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~ 338 (485)
.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|++++.+ .+.+....+|+..++++|.||+|+| ..|+
T Consensus 194 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G--~~p~ 271 (455)
T 1ebd_A 194 TKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVG--RRPN 271 (455)
T ss_dssp CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSC--EEES
T ss_pred CcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcC--CCcc
Confidence 89999999999999999999999999999999999999999999743 3444321234444599999999999 6888
Q ss_pred hHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHhh
Q 011476 339 IKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSK 392 (485)
Q Consensus 339 ~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~ 392 (485)
+..+ ++.+|+ +.+|+|.||+++|| +.|+|||+|||+..+.. ...+..++..+
T Consensus 272 ~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~~-~~~A~~~g~~a 326 (455)
T 1ebd_A 272 TDELGLEQIGIKMTNRGLIEVDQQCRT-SVPNIFAIGDIVPGPAL-AHKASYEGKVA 326 (455)
T ss_dssp CSSSSTTTTTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSSSCCC-HHHHHHHHHHH
T ss_pred cCcCChhhcCCccCCCCCEeeCCCccc-CCCCEEEEeccCCCccc-HHHHHHHHHHH
Confidence 8433 677777 55789999999998 99999999999986442 33444444433
No 34
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=5.9e-35 Score=301.82 Aligned_cols=286 Identities=22% Similarity=0.300 Sum_probs=206.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCC-CCCcEEEEc--------CCCCcccCCCc----ccc----------------ccC---
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNN-PSYDVQVIS--------PRNYFAFTPLL----PSV----------------TCG--- 105 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~-~g~~V~lie--------~~~~~~~~~~~----~~~----------------~~~--- 105 (485)
.+||+|||||+||+++|++|++ .|++|+||| +++.+|+++.. |.. ..+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 5799999999999999999999 999999999 34556654221 100 000
Q ss_pred -----ccccccccc-----------chHHHHhhC-CCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEE
Q 011476 106 -----TVEARSIVE-----------PVRNIVRKK-NVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLV 168 (485)
Q Consensus 106 -----~~~~~~~~~-----------~~~~~~~~~-gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lv 168 (485)
..+...+.. .+...+++. +++ ++.+++..++. ++|.+.+..+ ........+.||+||
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~--~~~g~~~~i~~--~~v~v~~~~~--~~~~~~~~~~~d~lV 160 (495)
T 2wpf_A 87 DGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLD--FFLGWGSLESK--NVVVVRETAD--PKSAVKERLQADHIL 160 (495)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEE--EEESEEEEEET--TEEEEESSSS--TTSCEEEEEEEEEEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeE--EEEeEEEEeeC--CEEEEeecCC--ccCCCCeEEEcCEEE
Confidence 111111111 123345666 855 66777888865 6777752110 000001379999999
Q ss_pred EccCCCCCCCCCCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHH
Q 011476 169 IAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDE 248 (485)
Q Consensus 169 iAtG~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~ 248 (485)
||||++|+.|++||.+ .++ +..++ +. +. ..+++++|||||++|+|+|..|.++.
T Consensus 161 iATGs~p~~p~i~G~~-~~~---~~~~~----------~~---~~-------~~~~~vvViGgG~ig~E~A~~l~~~~-- 214 (495)
T 2wpf_A 161 LATGSWPQMPAIPGIE-HCI---SSNEA----------FY---LP-------EPPRRVLTVGGGFISVEFAGIFNAYK-- 214 (495)
T ss_dssp ECCCEEECCCCCTTGG-GCE---EHHHH----------TT---CS-------SCCSEEEEECSSHHHHHHHHHHHHHC--
T ss_pred EeCCCCcCCCCCCCcc-ccc---cHHHH----------Hh---hh-------hcCCeEEEECCCHHHHHHHHHHHhhC--
Confidence 9999999999999973 222 22111 11 11 12359999999999999999998861
Q ss_pred HHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--c-EEEEEcCCCeEEEEecC
Q 011476 249 DLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--E-IFTKVRGNGETSSMPYG 325 (485)
Q Consensus 249 ~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~--~-v~~~~~~~G~~~~i~~D 325 (485)
| +|.+||++++.+++++.+++++.+.+.+.+++.||++++++.|++++.+ + +.+.. .+|+. +++|
T Consensus 215 ------~---~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~-~~G~~--i~~D 282 (495)
T 2wpf_A 215 ------P---PGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTF-ESGKT--LDVD 282 (495)
T ss_dssp ------C---TTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEE-TTSCE--EEES
T ss_pred ------C---CCCeEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEE-CCCcE--EEcC
Confidence 1 2689999999999999999999999999999999999999999999753 2 44443 57764 9999
Q ss_pred eEEEccCCCCCcchHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHh
Q 011476 326 MVVWSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFS 391 (485)
Q Consensus 326 ~vi~a~G~~~~p~~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~ 391 (485)
.||+|+| ..|++..| ++.+|+ +.+|+|.||+++|| +.|+|||+|||+..+. ....+..++..
T Consensus 283 ~vv~a~G--~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~~~-l~~~A~~~g~~ 347 (495)
T 2wpf_A 283 VVMMAIG--RIPRTNDLQLGNVGVKLTPKGGVQVDEFSRT-NVPNIYAIGDITDRLM-LTPVAINEGAA 347 (495)
T ss_dssp EEEECSC--EEECCGGGTGGGTTCCBCTTSSBCCCTTCBC-SSTTEEECGGGGCSCC-CHHHHHHHHHH
T ss_pred EEEECCC--CcccccccchhhcCccCCCCCCEEECCCCcc-CCCCEEEEeccCCCcc-CHHHHHHHHHH
Confidence 9999999 78998556 678887 55789999999998 9999999999997543 23444444443
No 35
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=2.5e-34 Score=281.67 Aligned_cols=281 Identities=14% Similarity=0.148 Sum_probs=201.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCcc----cccc--CcccccccccchHHHHhhCCCeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLP----SVTC--GTVEARSIVEPVRNIVRKKNVDICFW 130 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~gv~v~~~ 130 (485)
..++|+||||||||+++|..|++.|++|+|||+. .+++..... .+.. ......++...+.+.+++.++++ .
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~--~ 83 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKV--E 83 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEE--E
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEE--E
Confidence 3579999999999999999999999999999998 454432211 1110 11223355666777888889775 4
Q ss_pred EeEEEEEecC--CC---EEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCCcc-ccccChhHHHHHHHHHH
Q 011476 131 EAECFKIDAE--NK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVI 204 (485)
Q Consensus 131 ~~~v~~id~~--~~---~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~~-~~~~~~~~~~~~~~~~~ 204 (485)
.+++..++.. ++ .+.+.++. .+.||+||+|||++|+.|++||.+... ..+..... . ..
T Consensus 84 ~~~v~~i~~~~~~~~~~~v~~~~g~----------~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~---~-~~-- 147 (325)
T 2q7v_A 84 MDEVQGVQHDATSHPYPFTVRGYNG----------EYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCAT---C-DG-- 147 (325)
T ss_dssp ECCEEEEEECTTSSSCCEEEEESSC----------EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHH---H-HG--
T ss_pred eeeEEEEEeccCCCceEEEEECCCC----------EEEeCEEEECcCCCcCCCCCCChhhccCceEEEecc---C-CH--
Confidence 5789998876 43 55555443 899999999999999999999975311 01111100 0 00
Q ss_pred HHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHH
Q 011476 205 ESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFA 284 (485)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~ 284 (485)
....+++++|||+|++|+|+|..|.++ +.+|+++++.+.+.. ++. +
T Consensus 148 --------------~~~~~~~v~VvG~G~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~~~--~~~----~ 193 (325)
T 2q7v_A 148 --------------FFYKGKKVVVIGGGDAAVEEGMFLTKF--------------ADEVTVIHRRDTLRA--NKV----A 193 (325)
T ss_dssp --------------GGGTTCEEEEECCSHHHHHHHHHHTTT--------------CSEEEEECSSSSCCS--CHH----H
T ss_pred --------------HHcCCCEEEEECCCHHHHHHHHHHHhc--------------CCEEEEEeCCCcCCc--chH----H
Confidence 012457999999999999999999886 689999999887642 222 2
Q ss_pred HHHH-HhCCcEEEcCceEEEEeCC----cEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHh-CCCCCCceeeCC
Q 011476 285 EEKF-SRDGIDVKLGSMVVKVTDK----EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV-GQTNRRALATDE 358 (485)
Q Consensus 285 ~~~l-~~~gV~v~~~~~v~~v~~~----~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~-g~~~~g~i~vd~ 358 (485)
.+.+ ++.||+++++++++++..+ ++.+....+|+..+++||.||+|+| ..|++ .+++.+ .++.+|+|.||+
T Consensus 194 ~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G--~~p~~-~~l~~~~~~~~~g~i~vd~ 270 (325)
T 2q7v_A 194 QARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIG--HVPNT-AFVKDTVSLRDDGYVDVRD 270 (325)
T ss_dssp HHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSC--EEESC-GGGTTTSCBCTTSCBCCBT
T ss_pred HHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccC--CCCCh-HHHhhhcccCCCccEecCC
Confidence 3334 4569999999999999764 2444433467655699999999999 68887 555554 236689999999
Q ss_pred CccccCCCCeEEeccccCCCCcchHHHHHHHHhhcc
Q 011476 359 WLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKAD 394 (485)
Q Consensus 359 ~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~a~ 394 (485)
+++| +.|+|||+|||+..+......++.++..+|.
T Consensus 271 ~~~t-~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~ 305 (325)
T 2q7v_A 271 EIYT-NIPMLFAAGDVSDYIYRQLATSVGAGTRAAM 305 (325)
T ss_dssp TTBC-SSTTEEECSTTTCSSCCCHHHHHHHHHHHHH
T ss_pred CCcc-CCCCEEEeecccCccHHHHHHHHHHHHHHHH
Confidence 9997 9999999999998754556666666665543
No 36
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.8e-35 Score=300.51 Aligned_cols=286 Identities=21% Similarity=0.315 Sum_probs=205.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccc---------------------cCc------ccc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT---------------------CGT------VEA 109 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~---------------------~~~------~~~ 109 (485)
+.+||+||||||||++||..|++.|++|+|||+++.+|+++...... .+. .+.
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 103 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNL 103 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCH
Confidence 45899999999999999999999999999999988887753211000 000 000
Q ss_pred cc-----------cccchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 110 RS-----------IVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 110 ~~-----------~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
.. +...+...+++.+++ ++.+.+..+++ +.+.+... +++...+.||+||||||+.| +
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g~~~~~~~--~~~~v~~~------~g~~~~~~~d~lViATGs~p--~ 171 (491)
T 3urh_A 104 QKMMAHKDATVKSNVDGVSFLFKKNKID--GFQGTGKVLGQ--GKVSVTNE------KGEEQVLEAKNVVIATGSDV--A 171 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESEEEECSS--SEEEEECT------TSCEEEEECSEEEECCCEEC--C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEEEecC--CEEEEEeC------CCceEEEEeCEEEEccCCCC--C
Confidence 00 111234456667866 67777777765 44444432 22234899999999999986 4
Q ss_pred CCCCCC---CccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCc
Q 011476 179 NTPGVE---ENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYP 255 (485)
Q Consensus 179 ~i~G~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p 255 (485)
.+||.+ .... +.+..+ .+ .+. ..+++++|||||++|+|+|..|.++
T Consensus 172 ~ipg~~~~~~~~~-~~~~~~----------~~---~~~-------~~~~~vvViGgG~~g~E~A~~l~~~---------- 220 (491)
T 3urh_A 172 GIPGVEVAFDEKT-IVSSTG----------AL---ALE-------KVPASMIVVGGGVIGLELGSVWARL---------- 220 (491)
T ss_dssp CBTTBCCCCCSSS-EECHHH----------HT---SCS-------SCCSEEEEECCSHHHHHHHHHHHHH----------
T ss_pred CCCCcccccCCee-EEehhH----------hh---hhh-------hcCCeEEEECCCHHHHHHHHHHHHc----------
Confidence 567764 1211 222211 11 111 2346999999999999999999997
Q ss_pred CCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEE--EcCCCeEEEEecCeEEEcc
Q 011476 256 KVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTK--VRGNGETSSMPYGMVVWST 331 (485)
Q Consensus 256 ~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~--~~~~G~~~~i~~D~vi~a~ 331 (485)
|.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|++++. +.+.+. ...+|+..++++|.||+|+
T Consensus 221 ----g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~ 296 (491)
T 3urh_A 221 ----GAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIAT 296 (491)
T ss_dssp ----TCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECC
T ss_pred ----CCEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEee
Confidence 68999999999999999999999999999999999999999999974 333333 2223644469999999999
Q ss_pred CCCCCcchHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHhhc
Q 011476 332 GIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKA 393 (485)
Q Consensus 332 G~~~~p~~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~a 393 (485)
| ..|++..| ++.+|+ +.+|+|.||+++|| +.|+|||+|||+..+. ....+..++..+|
T Consensus 297 G--~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~-~~~~A~~~g~~aa 357 (491)
T 3urh_A 297 G--RKPSTDGLGLAKAGVVLDSRGRVEIDRHFQT-SIAGVYAIGDVVRGPM-LAHKAEDEGVAVA 357 (491)
T ss_dssp C--CEECCTTSCHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSSSCC-CHHHHHHHHHHHH
T ss_pred C--CccCCCccCchhcCceECCCCCEeECCCCCC-CCCCEEEEEecCCCcc-chhHHHHHHHHHH
Confidence 9 78988555 788887 56889999999998 9999999999997654 3445555554433
No 37
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=8.6e-35 Score=300.39 Aligned_cols=285 Identities=21% Similarity=0.291 Sum_probs=206.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCC-CCCcEEEEc--------CCCCcccCCCc----ccc----------------ccC---
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNN-PSYDVQVIS--------PRNYFAFTPLL----PSV----------------TCG--- 105 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~-~g~~V~lie--------~~~~~~~~~~~----~~~----------------~~~--- 105 (485)
.+||+|||||+||+++|++|++ .|++|+||| +.+.+|+++.. |.. ..+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 5799999999999999999999 999999999 35556664321 110 000
Q ss_pred -----cccccccc-----------cchHHHHhhC-CCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCc-eEEeecCEE
Q 011476 106 -----TVEARSIV-----------EPVRNIVRKK-NVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKE-EFCMDYDYL 167 (485)
Q Consensus 106 -----~~~~~~~~-----------~~~~~~~~~~-gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~-~~~~~yd~l 167 (485)
..+...+. ..+...+++. +++ ++.+++..+++ +.+.+.+.. ..+++ ...+.||+|
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~--~~~g~~~~i~~--~~v~v~~~~---~~~g~~~~~~~~d~l 155 (490)
T 1fec_A 83 DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLT--FHQGFGALQDN--HTVLVRESA---DPNSAVLETLDTEYI 155 (490)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE--EEESEEEEEET--TEEEEESSS---STTSCEEEEEEEEEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE--EEEeEEEEeeC--CEEEEEeec---cCCCCceEEEEcCEE
Confidence 11111111 1233445667 855 66777888875 567765200 00110 138999999
Q ss_pred EEccCCCCCCCCCCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhH
Q 011476 168 VIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVD 247 (485)
Q Consensus 168 viAtG~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~ 247 (485)
|||||++|+.|++||.+ .++ +..+. +. +. ..+++++|||||++|+|+|..+.++.
T Consensus 156 viAtGs~p~~p~i~g~~-~~~---~~~~~----------~~---~~-------~~~~~vvViGgG~ig~E~A~~l~~~~- 210 (490)
T 1fec_A 156 LLATGSWPQHLGIEGDD-LCI---TSNEA----------FY---LD-------EAPKRALCVGGGYISIEFAGIFNAYK- 210 (490)
T ss_dssp EECCCEEECCCCSBTGG-GCB---CHHHH----------TT---CS-------SCCSEEEEECSSHHHHHHHHHHHHHS-
T ss_pred EEeCCCCCCCCCCCCcc-cee---cHHHH----------hh---hh-------hcCCeEEEECCCHHHHHHHHHHHhhc-
Confidence 99999999999999873 222 22221 11 11 12359999999999999999998861
Q ss_pred HHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--c-EEEEEcCCCeEEEEec
Q 011476 248 EDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--E-IFTKVRGNGETSSMPY 324 (485)
Q Consensus 248 ~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~--~-v~~~~~~~G~~~~i~~ 324 (485)
++|.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|++++.+ + +.+.. .+|+. +++
T Consensus 211 ----------~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~-~~G~~--i~~ 277 (490)
T 1fec_A 211 ----------ARGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVF-ESGAE--ADY 277 (490)
T ss_dssp ----------CTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEE-TTSCE--EEE
T ss_pred ----------cCcCeEEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEE-CCCcE--EEc
Confidence 12689999999999999999999999999999999999999999999753 2 44443 57764 999
Q ss_pred CeEEEccCCCCCcchHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHh
Q 011476 325 GMVVWSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFS 391 (485)
Q Consensus 325 D~vi~a~G~~~~p~~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~ 391 (485)
|.||+|+| ..|++..| ++.+|+ +.+|+|.||+++|| +.|+|||+|||+..+. ....+..++..
T Consensus 278 D~vv~a~G--~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~~~~-l~~~A~~~g~~ 343 (490)
T 1fec_A 278 DVVMLAIG--RVPRSQTLQLEKAGVEVAKNGAIKVDAYSKT-NVDNIYAIGDVTDRVM-LTPVAINEGAA 343 (490)
T ss_dssp SEEEECSC--EEESCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGGCSCC-CHHHHHHHHHH
T ss_pred CEEEEccC--CCcCccccCchhcCccCCCCCCEEECCCCcc-CCCCEEEEeccCCCcc-CHHHHHHHHHH
Confidence 99999999 78888556 788887 56789999999998 9999999999997543 24444444443
No 38
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=9.3e-35 Score=297.18 Aligned_cols=272 Identities=20% Similarity=0.306 Sum_probs=203.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCC----cccc-----------c------cC------ccccc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPSV-----------T------CG------TVEAR 110 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~----~~~~-----------~------~~------~~~~~ 110 (485)
.+||+|||||+||+++|++|++.|++|+|||++ .+++++. .|.. . .+ ..+..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWE 82 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCHH
Confidence 579999999999999999999999999999997 4554321 1110 0 00 00111
Q ss_pred cc-----------ccchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCC
Q 011476 111 SI-----------VEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (485)
Q Consensus 111 ~~-----------~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~ 179 (485)
.+ ...+...+++.+++ ++.+++..++. +.+.+ ++. .+.||+||||||++|+.|+
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g~~~~i~~--~~v~~-~g~----------~~~~d~lviAtGs~p~~p~ 147 (450)
T 1ges_A 83 TLIASRTAYIDRIHTSYENVLGKNNVD--VIKGFARFVDA--KTLEV-NGE----------TITADHILIATGGRPSHPD 147 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESCCEEEET--TEEEE-TTE----------EEEEEEEEECCCEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEEecC--CEEEE-CCE----------EEEeCEEEECCCCCCCCCC
Confidence 11 11233445667866 56667777765 56766 332 7999999999999999999
Q ss_pred CCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCC
Q 011476 180 TPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKD 259 (485)
Q Consensus 180 i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~ 259 (485)
+||.+ .+ .+..+... . . ..+++++|||||++|+|+|..|.++
T Consensus 148 i~g~~-~~---~~~~~~~~----------~---~-------~~~~~vvViGgG~~g~e~A~~l~~~-------------- 189 (450)
T 1ges_A 148 IPGVE-YG---IDSDGFFA----------L---P-------ALPERVAVVGAGYIGVELGGVINGL-------------- 189 (450)
T ss_dssp STTGG-GS---BCHHHHHH----------C---S-------SCCSEEEEECCSHHHHHHHHHHHHT--------------
T ss_pred CCCcc-ce---ecHHHhhh----------h---h-------hcCCeEEEECCCHHHHHHHHHHHhc--------------
Confidence 99873 22 22222211 1 1 1235999999999999999999987
Q ss_pred CceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--c-EEEEEcCCCeEEEEecCeEEEccCCCCC
Q 011476 260 SVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--E-IFTKVRGNGETSSMPYGMVVWSTGIAPH 336 (485)
Q Consensus 260 g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~--~-v~~~~~~~G~~~~i~~D~vi~a~G~~~~ 336 (485)
|.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|++++.+ + +.+.. .+|+. +++|.||+|+| ..
T Consensus 190 g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~-~~g~~--i~~D~vv~a~G--~~ 264 (450)
T 1ges_A 190 GAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLEL-EDGRS--ETVDCLIWAIG--RE 264 (450)
T ss_dssp TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEE-TTSCE--EEESEEEECSC--EE
T ss_pred CCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEE-CCCcE--EEcCEEEECCC--CC
Confidence 689999999999999999999999999999999999999999999753 3 44444 56764 99999999999 68
Q ss_pred cchHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHH
Q 011476 337 AIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIF 390 (485)
Q Consensus 337 p~~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~ 390 (485)
|++..| ++.+|+ +.+|+|.||+++|| +.|+|||+|||+..+.. ...+..++.
T Consensus 265 p~~~~l~~~~~gl~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~-~~~A~~~g~ 319 (450)
T 1ges_A 265 PANDNINLEAAGVKTNEKGYIVVDKYQNT-NIEGIYAVGDNTGAVEL-TPVAVAAGR 319 (450)
T ss_dssp ESCTTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECSGGGTSCCC-HHHHHHHHH
T ss_pred cCCCCCCchhcCceECCCCCEeECCCCcc-CCCCEEEEeccCCCCcc-HHHHHHHHH
Confidence 988555 788887 56889999999997 99999999999875432 333444333
No 39
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=1.9e-34 Score=296.60 Aligned_cols=279 Identities=19% Similarity=0.226 Sum_probs=202.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCC----------------------cccc---cc--Cccccc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----------------------LPSV---TC--GTVEAR 110 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~----------------------~~~~---~~--~~~~~~ 110 (485)
.++|+|||||+||+++|.+|++.|++|+|||++ .+|+++. .+.. .. ...+..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRS 82 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCHH
Confidence 579999999999999999999999999999988 4444311 1111 00 001111
Q ss_pred cccc------------chHHHHhhC-CCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCC
Q 011476 111 SIVE------------PVRNIVRKK-NVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (485)
Q Consensus 111 ~~~~------------~~~~~~~~~-gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~ 177 (485)
.+.. .+.+++++. +++ ++.+++..++.....+.+.++ +...+.||+||||||++|+.
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~~~v~--~~~g~~~~~~~~~~~v~~~~g--------~~~~~~~d~lviAtGs~p~~ 152 (467)
T 1zk7_A 83 KLLAQQQARVDELRHAKYEGILGGNPAIT--VVHGEARFKDDQSLTVRLNEG--------GERVVMFDRCLVATGASPAV 152 (467)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHTTCTTEE--EEEEEEEEEETTEEEEEETTS--------SEEEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHhhhhHHHHHhccCCeE--EEEEEEEEccCCEEEEEeCCC--------ceEEEEeCEEEEeCCCCCCC
Confidence 1111 123455666 755 566778888865434443332 12379999999999999999
Q ss_pred CCCCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCC
Q 011476 178 FNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKV 257 (485)
Q Consensus 178 ~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~ 257 (485)
|++||.+... +.+..+... .. ..+++++|||||++|+|+|..+.++
T Consensus 153 p~i~G~~~~~--~~~~~~~~~----------~~----------~~~~~vvViGgG~~g~E~A~~l~~~------------ 198 (467)
T 1zk7_A 153 PPIPGLKESP--YWTSTEALA----------SD----------TIPERLAVIGSSVVALELAQAFARL------------ 198 (467)
T ss_dssp CCCTTTTTSC--CBCHHHHHH----------CS----------SCCSEEEEECCSHHHHHHHHHHHHT------------
T ss_pred CCCCCCCcCc--eecHHHHhc----------cc----------ccCCEEEEECCCHHHHHHHHHHHHc------------
Confidence 9999985321 123222211 11 1346999999999999999999987
Q ss_pred CCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC-c-EEEEEcCCCeEEEEecCeEEEccCCCC
Q 011476 258 KDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK-E-IFTKVRGNGETSSMPYGMVVWSTGIAP 335 (485)
Q Consensus 258 ~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~-~-v~~~~~~~G~~~~i~~D~vi~a~G~~~ 335 (485)
+.+|+++++.+++++ +++++.+.+.+.+++.||++++++.|++++.+ . +.+.. . +. ++++|.||+|+| .
T Consensus 199 --g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~-~-~~--~i~aD~Vv~a~G--~ 269 (467)
T 1zk7_A 199 --GSKVTVLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTT-T-HG--ELRADKLLVATG--R 269 (467)
T ss_dssp --TCEEEEECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEE-T-TE--EEEESEEEECSC--E
T ss_pred --CCEEEEEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEE-C-Cc--EEEcCEEEECCC--C
Confidence 689999999999999 99999999999999999999999999999743 2 33333 3 44 399999999999 6
Q ss_pred CcchHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHhh
Q 011476 336 HAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSK 392 (485)
Q Consensus 336 ~p~~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~ 392 (485)
.|++..+ ++.+|+ +.+|+|.||+++|| +.|+|||+|||+..+.. ...+..++..+
T Consensus 270 ~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~~~~-~~~A~~~g~~a 327 (467)
T 1zk7_A 270 TPNTRSLALDAAGVTVNAQGAIVIDQGMRT-SNPNIYAAGDCTDQPQF-VYVAAAAGTRA 327 (467)
T ss_dssp EESCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSTTBSSCCC-HHHHHHHHHHH
T ss_pred CcCCCcCCchhcCCcCCCCCCEEECCCccc-CCCCEEEEeccCCCccc-HHHHHHHHHHH
Confidence 8887444 577777 55788999999998 99999999999987543 44444444433
No 40
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=1.1e-34 Score=299.88 Aligned_cols=284 Identities=17% Similarity=0.227 Sum_probs=204.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcC--------CCCcccCCCcccc------------------------c-
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISP--------RNYFAFTPLLPSV------------------------T- 103 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~--------~~~~~~~~~~~~~------------------------~- 103 (485)
..+||+||||||||++||..|++.|++|+|||+ ...+|++++.... .
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 468999999999999999999999999999997 3445653221100 0
Q ss_pred --cCccccccccc-----------chHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEc
Q 011476 104 --CGTVEARSIVE-----------PVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIA 170 (485)
Q Consensus 104 --~~~~~~~~~~~-----------~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviA 170 (485)
....+...+.. .+...+++.+++ ++.+.+..+++. .+.+.+. +++...+.||+||||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~--~i~g~~~~~~~~--~v~v~~~------~g~~~~~~~d~lViA 154 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVK--YFNIKASFVDEH--TVRGVDK------GGKATLLSAEHIVIA 154 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EECCEEEESSSS--EEEEECT------TSCEEEEEEEEEEEC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEEEccCC--eEEEEeC------CCceEEEECCEEEEc
Confidence 00111111111 123345667765 678888887764 4444332 222348999999999
Q ss_pred cCCCCCCCC-CCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHH
Q 011476 171 MGARANTFN-TPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDED 249 (485)
Q Consensus 171 tG~~~~~~~-i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~ 249 (485)
||++|+.|+ +||.++.++ +.. +.+ .++. .+++++|||||++|+|+|..+.++
T Consensus 155 TGs~p~~p~~i~G~~~~~~---~~~----------~~~---~~~~-------~~~~vvViGgG~ig~E~A~~l~~~---- 207 (488)
T 3dgz_A 155 TGGRPRYPTQVKGALEYGI---TSD----------DIF---WLKE-------SPGKTLVVGASYVALECAGFLTGI---- 207 (488)
T ss_dssp CCEEECCCSSCBTHHHHCB---CHH----------HHT---TCSS-------CCCSEEEECCSHHHHHHHHHHHHT----
T ss_pred CCCCCCCCCCCCCcccccC---cHH----------HHH---hhhh-------cCCeEEEECCCHHHHHHHHHHHHc----
Confidence 999999998 999753322 111 111 1221 235899999999999999999997
Q ss_pred HHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeC---CcEE--EEEcCCCeEEEEec
Q 011476 250 LFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD---KEIF--TKVRGNGETSSMPY 324 (485)
Q Consensus 250 ~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~---~~v~--~~~~~~G~~~~i~~ 324 (485)
|.+||++++. .+++.+++++.+.+.+.+++.||++++++.+.+++. +.+. +....+|+..++++
T Consensus 208 ----------g~~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~ 276 (488)
T 3dgz_A 208 ----------GLDTTVMMRS-IPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTF 276 (488)
T ss_dssp ----------TCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEE
T ss_pred ----------CCceEEEEcC-cccccCCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEEC
Confidence 6899999986 478889999999999999999999999999999863 2333 33323466556899
Q ss_pred CeEEEccCCCCCcchHHH-HHHhCC--C-CCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHh
Q 011476 325 GMVVWSTGIAPHAIIKDF-MKQVGQ--T-NRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFS 391 (485)
Q Consensus 325 D~vi~a~G~~~~p~~~~l-~~~~g~--~-~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~ 391 (485)
|.|++|+| ..|++..| ++.+|+ + .+|+|.||+++|| +.|+|||+|||+.........+..++..
T Consensus 277 D~vi~a~G--~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~~~A~~~g~~ 344 (488)
T 3dgz_A 277 DTVLWAIG--RVPETRTLNLEKAGISTNPKNQKIIVDAQEAT-SVPHIYAIGDVAEGRPELTPTAIKAGKL 344 (488)
T ss_dssp SEEEECSC--EEESCGGGTGGGGTCCBCSSSCCBCCCTTSBC-SSTTEEECGGGBTTCCCCHHHHHHHHHH
T ss_pred CEEEEccc--CCcccCcCCccccCcEecCCCCeEeECCCCcc-CCCCEEEeEEecCCCCcchhHHHHHHHH
Confidence 99999999 78998555 677887 4 6799999999998 9999999999985433334444444443
No 41
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=2.2e-34 Score=297.46 Aligned_cols=276 Identities=16% Similarity=0.281 Sum_probs=207.5
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCC--CCCcEEEEcCCCCcccC-C-CccccccCcc---------------------ccc
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNN--PSYDVQVISPRNYFAFT-P-LLPSVTCGTV---------------------EAR 110 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~--~g~~V~lie~~~~~~~~-~-~~~~~~~~~~---------------------~~~ 110 (485)
...++|||||||+||++||..|+. .+++|+|||++++++|. | +...+..+.. .+.
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPP 88 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCG
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccch
Confidence 346899999999999999998874 48999999999887664 2 1111111100 000
Q ss_pred ccccchHHHH--hhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCC----
Q 011476 111 SIVEPVRNIV--RKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE---- 184 (485)
Q Consensus 111 ~~~~~~~~~~--~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~---- 184 (485)
+.......+. .+.++++ +...+|..+|+..++|.+.++. .+.||+||||||++|+.++++|..
T Consensus 89 ~~~~~~~~l~~~~~~gv~~-~~g~~v~~id~~~~~V~~~~g~----------~i~yd~lviATGs~p~~~~~~~~~~~~~ 157 (493)
T 1m6i_A 89 SFYVSAQDLPHIENGGVAV-LTGKKVVQLDVRDNMVKLNDGS----------QITYEKCLIATGGTPRSLSAIDRAGAEV 157 (493)
T ss_dssp GGSBCTTTTTTSTTCEEEE-EETCCEEEEEGGGTEEEETTSC----------EEEEEEEEECCCEEECCCHHHHTSCHHH
T ss_pred HhhcchhhhhhhhcCCeEE-EcCCEEEEEECCCCEEEECCCC----------EEECCEEEECCCCCCCCCCCcccccccc
Confidence 1111111111 2356554 2345899999988999887654 899999999999999888766531
Q ss_pred -CccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceE
Q 011476 185 -ENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKI 263 (485)
Q Consensus 185 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~V 263 (485)
++++.+++.+++..+...+ ..+++++|||||++|+|+|..|.+.+.+ .+.+|
T Consensus 158 ~~~v~~~~~~~d~~~l~~~~-----------------~~~~~vvViGgG~iG~E~A~~l~~~~~~----------~g~~V 210 (493)
T 1m6i_A 158 KSRTTLFRKIGDFRSLEKIS-----------------REVKSITIIGGGFLGSELACALGRKARA----------LGTEV 210 (493)
T ss_dssp HHTEEECCSHHHHHHHHHHH-----------------HHCSEEEEECCSHHHHHHHHHHHHHHHH----------HTCEE
T ss_pred cCceEEEcCHHHHHHHHHHh-----------------hcCCeEEEECCCHHHHHHHHHHHhhhhh----------cCCEE
Confidence 3566788888887776654 2467999999999999999999886432 16799
Q ss_pred EEEecCccccc-cccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCCCCCcchH
Q 011476 264 TLLEAADHILN-MFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIK 340 (485)
Q Consensus 264 tlv~~~~~~l~-~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~ 340 (485)
+++++.+.+++ .+++.+.+.+.+.+++.||++++++.|++++. +.+.+. +.+|++ ++||.||+|+| ..|++
T Consensus 211 ~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~-l~dG~~--i~aD~Vv~a~G--~~pn~- 284 (493)
T 1m6i_A 211 IQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIK-LKDGRK--VETDHIVAAVG--LEPNV- 284 (493)
T ss_dssp EEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEE-ETTSCE--EEESEEEECCC--EEECC-
T ss_pred EEEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEE-ECCCCE--EECCEEEECCC--CCccH-
Confidence 99999877654 46788999999999999999999999999964 334444 367765 99999999999 68888
Q ss_pred HHHHHhCC--CC-CCceeeCCCccccCCCCeEEeccccCC
Q 011476 341 DFMKQVGQ--TN-RRALATDEWLRVEGSDSIYALGDCATV 377 (485)
Q Consensus 341 ~l~~~~g~--~~-~g~i~vd~~l~t~~~~~Vya~GD~~~~ 377 (485)
.|++.+|+ +. +|+|.||+++|| .|+|||+|||+..
T Consensus 285 ~l~~~~gl~~~~~~ggi~Vd~~l~t--~~~IyA~GD~a~~ 322 (493)
T 1m6i_A 285 ELAKTGGLEIDSDFGGFRVNAELQA--RSNIWVAGDAACF 322 (493)
T ss_dssp TTHHHHTCCBCTTTCSEECCTTCEE--ETTEEECGGGEEE
T ss_pred HHHHHcCCccccCCCcEEECCCccc--CCCeeEeeeeEec
Confidence 67888887 32 589999999997 5999999999975
No 42
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=1.4e-34 Score=299.44 Aligned_cols=269 Identities=18% Similarity=0.199 Sum_probs=196.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC--------CcccCCCccccc---------------------cCc--
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN--------YFAFTPLLPSVT---------------------CGT-- 106 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~--------~~~~~~~~~~~~---------------------~~~-- 106 (485)
.|||+|||+||||++||..+++.|.+|+|||+.. .+|++++..+.. .|.
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 4899999999999999999999999999999643 366643211110 000
Q ss_pred ----cccccc-----------ccchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEcc
Q 011476 107 ----VEARSI-----------VEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAM 171 (485)
Q Consensus 107 ----~~~~~~-----------~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAt 171 (485)
.+...+ ...+...+++.+|+ ++++....+++..-.|..... .++...+.+|++||||
T Consensus 122 ~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~--~i~G~a~f~~~~~v~V~~~~~------~~~~~~i~a~~iiIAT 193 (542)
T 4b1b_A 122 DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVK--YINGLAKLKDKNTVSYYLKGD------LSKEETVTGKYILIAT 193 (542)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EECEEEEEEETTEEEEEEC--------CCCEEEEEEEEEEECC
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEeeeEEEcCCCcceEeeccc------CCceEEEeeeeEEecc
Confidence 011111 11233446677866 678888888774333333221 1224589999999999
Q ss_pred CCCCCCCCCCCCC-CccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHH
Q 011476 172 GARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDL 250 (485)
Q Consensus 172 G~~~~~~~i~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~ 250 (485)
|++|+.|+.++.+ +.++ +- .+.+ .++++| ++++|||||++|+|+|..++++
T Consensus 194 Gs~P~~P~~~~~~~~~~~---ts----------~~~l---~l~~lP-------~~lvIIGgG~IGlE~A~~~~~l----- 245 (542)
T 4b1b_A 194 GCRPHIPDDVEGAKELSI---TS----------DDIF---SLKKDP-------GKTLVVGASYVALECSGFLNSL----- 245 (542)
T ss_dssp CEEECCCSSSBTHHHHCB---CH----------HHHT---TCSSCC-------CSEEEECCSHHHHHHHHHHHHH-----
T ss_pred CCCCCCCCcccCCCcccc---Cc----------hhhh---ccccCC-------ceEEEECCCHHHHHHHHHHHhc-----
Confidence 9999988655433 2222 11 1223 334343 3999999999999999999998
Q ss_pred HhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEE
Q 011476 251 FKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVV 328 (485)
Q Consensus 251 ~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi 328 (485)
|.+||++++ +++|+.+|++++..+++.|++.||++++++.+.+++. +.+.+.. .++.. +.+|.|+
T Consensus 246 ---------G~~VTii~~-~~~L~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~-~~~~~--~~~D~vL 312 (542)
T 4b1b_A 246 ---------GYDVTVAVR-SIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEF-SDKTS--ELYDTVL 312 (542)
T ss_dssp ---------TCCEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEE-TTSCE--EEESEEE
T ss_pred ---------CCeEEEecc-cccccccchhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEE-cCCCe--EEEEEEE
Confidence 689999987 5688999999999999999999999999999999864 3455444 45554 7899999
Q ss_pred EccCCCCCcchHHH-HHHhCC--CCCC-ceeeCCCccccCCCCeEEeccccCCC
Q 011476 329 WSTGIAPHAIIKDF-MKQVGQ--TNRR-ALATDEWLRVEGSDSIYALGDCATVN 378 (485)
Q Consensus 329 ~a~G~~~~p~~~~l-~~~~g~--~~~g-~i~vd~~l~t~~~~~Vya~GD~~~~~ 378 (485)
+|+| ++||++.| ++.+|+ +.++ .|.+|+++|| +.|+|||+|||+...
T Consensus 313 vAvG--R~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~T-s~p~IyAiGDv~~~~ 363 (542)
T 4b1b_A 313 YAIG--RKGDIDGLNLESLNMNVNKSNNKIIADHLSCT-NIPSIFAVGDVAENV 363 (542)
T ss_dssp ECSC--EEESCGGGCGGGTTCCEETTTTEECCCTTSBC-SSTTEEECTTSBTTC
T ss_pred Eccc--ccCCccccCcccceeeecccCceEeccccccc-cCCCeEEeccccCCc
Confidence 9999 89999777 777777 4444 4678899998 999999999999763
No 43
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=2.6e-34 Score=282.66 Aligned_cols=282 Identities=17% Similarity=0.165 Sum_probs=207.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCC--cccc----cc--CcccccccccchHHHHhhCCCeEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL--LPSV----TC--GTVEARSIVEPVRNIVRKKNVDICF 129 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~--~~~~----~~--~~~~~~~~~~~~~~~~~~~gv~v~~ 129 (485)
.++|+|||||+||+++|++|++.|++|+|||+++.+++.+. .+.. .. ......++...+.+.+.++++++ +
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~ 83 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVY-S 83 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEE-E
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEE-E
Confidence 57999999999999999999999999999999988776421 1110 00 11123355556677777888776 3
Q ss_pred EEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCC---CCCCCCCCCCCCc----ccc-ccChhHHHHHHH
Q 011476 130 WEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGA---RANTFNTPGVEEN----CNF-LKEVEDAQRIRR 201 (485)
Q Consensus 130 ~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~---~~~~~~i~G~~~~----~~~-~~~~~~~~~~~~ 201 (485)
.+++|..++...+.+.+.... + ..+.||+||+|||+ .|+.+++||.+.. ++. +++.
T Consensus 84 ~~~~v~~i~~~~~~~~v~~~~-----g---~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~~~-------- 147 (335)
T 2zbw_A 84 LGERAETLEREGDLFKVTTSQ-----G---NAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSK-------- 147 (335)
T ss_dssp ESCCEEEEEEETTEEEEEETT-----S---CEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCSCG--------
T ss_pred eCCEEEEEEECCCEEEEEECC-----C---CEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecCch--------
Confidence 577899988766554444321 1 17999999999999 5777888886421 111 1111
Q ss_pred HHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHH
Q 011476 202 NVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRIT 281 (485)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~ 281 (485)
+...+++++|||+|++|+|+|..|.+. +.+|+++++++.+++. +...
T Consensus 148 -----------------~~~~~~~v~viG~G~~g~e~a~~l~~~--------------g~~V~~v~~~~~~~~~--~~~~ 194 (335)
T 2zbw_A 148 -----------------AEFQGKRVLIVGGGDSAVDWALNLLDT--------------ARRITLIHRRPQFRAH--EASV 194 (335)
T ss_dssp -----------------GGGTTCEEEEECSSHHHHHHHHHTTTT--------------SSEEEEECSSSSCCSC--HHHH
T ss_pred -----------------hhcCCCEEEEECCCHHHHHHHHHHHhh--------------CCEEEEEEcCCccCcc--HHHH
Confidence 012457999999999999999999876 6899999999887553 4667
Q ss_pred HHHHHHHHhCCcEEEcCceEEEEeCC----cEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC-CCCCceee
Q 011476 282 AFAEEKFSRDGIDVKLGSMVVKVTDK----EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALAT 356 (485)
Q Consensus 282 ~~~~~~l~~~gV~v~~~~~v~~v~~~----~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~-~~~g~i~v 356 (485)
+.+.+.+++.||++++++.|.+++.+ .+.+....+|+..++++|.||+|+| ..|++ .+++.+++ ..+|+|.|
T Consensus 195 ~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G--~~p~~-~~l~~~~~~~~~g~i~v 271 (335)
T 2zbw_A 195 KELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAG--YITKL-GPLANWGLALEKNKIKV 271 (335)
T ss_dssp HHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCC--EEEEC-GGGGGSCCCEETTEEEC
T ss_pred HHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeec--CCCCc-hHhhhcceeccCCeeee
Confidence 78888899999999999999999764 2444432367555699999999999 68887 57778887 24789999
Q ss_pred CCCccccCCCCeEEeccccCCCC--cchHHHHHHHHhhc
Q 011476 357 DEWLRVEGSDSIYALGDCATVNQ--RRVMEDIAAIFSKA 393 (485)
Q Consensus 357 d~~l~t~~~~~Vya~GD~~~~~~--~~~~~~~~~~~~~a 393 (485)
|+++|| +.|+|||+|||+..+. .....++.++..+|
T Consensus 272 d~~~~t-~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa 309 (335)
T 2zbw_A 272 DTTMAT-SIPGVYACGDIVTYPGKLPLIVLGFGEAAIAA 309 (335)
T ss_dssp CTTCBC-SSTTEEECSTTEECTTCCCCHHHHHHHHHHHH
T ss_pred CCCCCC-CCCCEEEeccccccCcchhhhhhhHHHHHHHH
Confidence 999997 9999999999997542 33444555544433
No 44
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=6.5e-35 Score=287.01 Aligned_cols=292 Identities=15% Similarity=0.183 Sum_probs=206.6
Q ss_pred CCCCCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC----CcccCCCcc----ccc--cCcccccccccchHHHHhh
Q 011476 53 EMGIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN----YFAFTPLLP----SVT--CGTVEARSIVEPVRNIVRK 122 (485)
Q Consensus 53 ~~~~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~----~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~ 122 (485)
+...++++|+|||||+||+++|+.|++.|++|+|||+.+ ..++..... .++ .......++...+.+.+.+
T Consensus 17 ~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (338)
T 3itj_A 17 RGSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTK 96 (338)
T ss_dssp ----CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHH
Confidence 344567899999999999999999999999999999954 344432111 110 1112234666778888888
Q ss_pred CCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCCcc-ccccChhHHHHHHH
Q 011476 123 KNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRR 201 (485)
Q Consensus 123 ~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~~-~~~~~~~~~~~~~~ 201 (485)
.++++ ...+|..++++.+.+.+.... ..+...+.||+||+|||+.|+.|++||.+... ..+.... ....
T Consensus 97 ~gv~i--~~~~v~~i~~~~~~~~v~~~~-----~~~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~~---~~~~ 166 (338)
T 3itj_A 97 FGTEI--ITETVSKVDLSSKPFKLWTEF-----NEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACA---VCDG 166 (338)
T ss_dssp TTCEE--ECSCEEEEECSSSSEEEEETT-----CSSSCCEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCH---HHHT
T ss_pred cCCEE--EEeEEEEEEEcCCEEEEEEEe-----cCCCcEEEeCEEEECcCCCcCCCCCCCchhccCccEEEch---hccc
Confidence 99875 445599999988877664321 00012789999999999999999999964210 0111110 0000
Q ss_pred HHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHH
Q 011476 202 NVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRIT 281 (485)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~ 281 (485)
. ++ ...+++++|||+|++|+|+|..|.++ +.+|+++++.+.+++ .
T Consensus 167 ~---------~~------~~~~~~v~vvG~G~~g~e~a~~l~~~--------------g~~v~~v~~~~~~~~------~ 211 (338)
T 3itj_A 167 A---------VP------IFRNKPLAVIGGGDSACEEAQFLTKY--------------GSKVFMLVRKDHLRA------S 211 (338)
T ss_dssp T---------SG------GGTTSEEEEECSSHHHHHHHHHHTTT--------------SSEEEEECSSSSCCS------C
T ss_pred c---------hh------hcCCCEEEEECCCHHHHHHHHHHHhc--------------CCEEEEEEcCCccCC------C
Confidence 0 00 13567999999999999999999986 689999999988755 2
Q ss_pred HHHHHHHHhC-CcEEEcCceEEEEeCCc-----EEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC--CCCCc
Q 011476 282 AFAEEKFSRD-GIDVKLGSMVVKVTDKE-----IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRA 353 (485)
Q Consensus 282 ~~~~~~l~~~-gV~v~~~~~v~~v~~~~-----v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~--~~~g~ 353 (485)
..+.+.+.+. ||++++++.|++++.+. +.+....+|+..+++||.||+|+| ..|+. .+++. ++ +.+|+
T Consensus 212 ~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G--~~p~~-~~~~~-~l~~~~~G~ 287 (338)
T 3itj_A 212 TIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIG--HTPAT-KIVAG-QVDTDEAGY 287 (338)
T ss_dssp HHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSC--EEECC-GGGBT-TBCBCTTSC
T ss_pred HHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeC--CCCCh-hHhhC-ceEecCCCc
Confidence 3445556555 99999999999997543 555544456656799999999999 67877 45444 55 67899
Q ss_pred eee-CCCccccCCCCeEEeccccCCCCcchHHHHHHHHhhcc
Q 011476 354 LAT-DEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKAD 394 (485)
Q Consensus 354 i~v-d~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~a~ 394 (485)
|.+ |++++| +.|+|||+|||+..+...+..++.++..+|.
T Consensus 288 i~v~~~~~~t-~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~ 328 (338)
T 3itj_A 288 IKTVPGSSLT-SVPGFFAAGDVQDSKYRQAITSAGSGCMAAL 328 (338)
T ss_dssp BCCCTTSSBC-SSTTEEECGGGGCSSCCCHHHHHHHHHHHHH
T ss_pred EEEcCccccc-CCCCEEEeeccCCCCccceeeehhhhHHHHH
Confidence 985 778887 9999999999998766667777777776554
No 45
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=3e-34 Score=279.08 Aligned_cols=279 Identities=18% Similarity=0.264 Sum_probs=199.8
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCC----cccccc-CcccccccccchHHHHhhCCCeEEEEEeE
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPSVTC-GTVEARSIVEPVRNIVRKKNVDICFWEAE 133 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~gv~v~~~~~~ 133 (485)
++|+||||||||+++|..|++.|++|+|||+. +++... ++.+.. ......++...+.+.+++.++++ +..++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~ 78 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGER--FGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDV-IDSQS 78 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSS--TTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEE-ECSCC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC--CCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeE-EccCE
Confidence 68999999999999999999999999999864 343321 111111 11122345566777788888765 23448
Q ss_pred EEEEecCC-----CEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCCcc-ccccChhHHHHHHHHHHHHH
Q 011476 134 CFKIDAEN-----KKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIESF 207 (485)
Q Consensus 134 v~~id~~~-----~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~~-~~~~~~~~~~~~~~~~~~~~ 207 (485)
|..++++. ..+.+.++. .+.||+||+|||++|+.|++||.++.. ..+..... +..
T Consensus 79 v~~i~~~~~~~~~~~v~~~~g~----------~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~---~~~------ 139 (310)
T 1fl2_A 79 ASKLIPAAVEGGLHQIETASGA----------VLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPH---CDG------ 139 (310)
T ss_dssp EEEEECCSSTTCCEEEEETTSC----------EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHH---HHG------
T ss_pred EEEEEecccCCceEEEEECCCC----------EEEeCEEEECcCCCcCCCCCCChhhcccceeEEecc---CcH------
Confidence 99997652 245554433 799999999999999989999975321 01111110 000
Q ss_pred hhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHH
Q 011476 208 EKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEK 287 (485)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~ 287 (485)
....+++++|||+|++|+|+|..|.+. +.+|+++++.+.+. ++ ..+.+.
T Consensus 140 -----------~~~~~~~v~VvG~G~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~~--~~----~~~~~~ 188 (310)
T 1fl2_A 140 -----------PLFKGKRVAVIGGGNSGVEAAIDLAGI--------------VEHVTLLEFAPEMK--AD----QVLQDK 188 (310)
T ss_dssp -----------GGGBTCEEEEECCSHHHHHHHHHHHTT--------------BSEEEEECSSSSCC--SC----HHHHHH
T ss_pred -----------hhcCCCEEEEECCCHHHHHHHHHHHHh--------------CCEEEEEEeCcccC--cc----HHHHHH
Confidence 013567999999999999999999886 68999999998763 33 334566
Q ss_pred HHh-CCcEEEcCceEEEEeCC--c---EEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHH-hCCCCCCceeeCCCc
Q 011476 288 FSR-DGIDVKLGSMVVKVTDK--E---IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQ-VGQTNRRALATDEWL 360 (485)
Q Consensus 288 l~~-~gV~v~~~~~v~~v~~~--~---v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~-~g~~~~g~i~vd~~l 360 (485)
+++ .||+++++++++++.++ + +.+....+|+..++++|.|++|+| ..|++ ++++. +.++.+|+|.||+++
T Consensus 189 l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G--~~p~~-~~l~~~l~~~~~g~i~vd~~~ 265 (310)
T 1fl2_A 189 LRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIG--LLPNT-NWLEGAVERNRMGEIIIDAKC 265 (310)
T ss_dssp HHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSC--EEESC-GGGTTTSCBCTTSCBCCCTTC
T ss_pred HhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeC--CccCc-hHHhccccccCCCcEEcCCCC
Confidence 676 69999999999999754 3 444433357656799999999999 68887 45544 233678999999999
Q ss_pred cccCCCCeEEeccccCCCCcchHHHHHHHHhhcc
Q 011476 361 RVEGSDSIYALGDCATVNQRRVMEDIAAIFSKAD 394 (485)
Q Consensus 361 ~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~a~ 394 (485)
|| +.|+|||+|||+..+...+..++.++..+|.
T Consensus 266 ~t-~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~ 298 (310)
T 1fl2_A 266 ET-NVKGVFAAGDCTTVPYKQIIIATGEGAKASL 298 (310)
T ss_dssp BC-SSTTEEECSTTBSCSSCCHHHHHHHHHHHHH
T ss_pred cc-CCCCEEEeecccCCcchhhhhhHhhHHHHHH
Confidence 97 9999999999999866566777777666554
No 46
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=1.1e-34 Score=282.43 Aligned_cols=280 Identities=14% Similarity=0.086 Sum_probs=204.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEE-EcCCCCcccCCCcc----cccc--CcccccccccchHHHHhhCCCeEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQV-ISPRNYFAFTPLLP----SVTC--GTVEARSIVEPVRNIVRKKNVDICF 129 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~l-ie~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~gv~v~~ 129 (485)
.++||+|||||+||+++|.+|++.|++|+| +|+ +.+++..... .++. ......++..++.+.+++.++++
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-- 79 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKH-- 79 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEE--
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEE--
Confidence 468999999999999999999999999999 998 5555532211 1111 11233467777888888899774
Q ss_pred EEeEEEEEecCC--CEEE--EecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCCcc-ccccChhHHHHHHHHHH
Q 011476 130 WEAECFKIDAEN--KKVY--CRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVI 204 (485)
Q Consensus 130 ~~~~v~~id~~~--~~v~--~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~~-~~~~~~~~~~~~~~~~~ 204 (485)
...+|..+ ++. +.+. +.++ . .+.||+||+|||+.|+.|++||.+... ..+..... ..
T Consensus 80 ~~~~v~~i-~~~~~~~~~v~~~~~---------~-~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~---~~---- 141 (315)
T 3r9u_A 80 EMVGVEQI-LKNSDGSFTIKLEGG---------K-TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCAT---CD---- 141 (315)
T ss_dssp ECCCEEEE-EECTTSCEEEEETTS---------C-EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHH---HH----
T ss_pred EEEEEEEE-ecCCCCcEEEEEecC---------C-EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeec---cc----
Confidence 45588888 544 4455 4332 1 789999999999999999999976311 11111110 00
Q ss_pred HHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHH
Q 011476 205 ESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFA 284 (485)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~ 284 (485)
.....+++++|||+|++|+|+|..|.+. +.+|+++++.+.+.. ++ ..+
T Consensus 142 -------------~~~~~~~~v~viG~g~~~~e~a~~l~~~--------------g~~v~~~~~~~~~~~--~~---~~~ 189 (315)
T 3r9u_A 142 -------------GFFYKNKEVAVLGGGDTALEEALYLANI--------------CSKIYLIHRRDEFRA--AP---STV 189 (315)
T ss_dssp -------------GGGGTTSEEEEECCBHHHHHHHHHHHTT--------------SSEEEEECSSSSCBS--CH---HHH
T ss_pred -------------ccccCcCEEEEECCCHHHHHHHHHHHhh--------------CCEEEEEEeCCCCCC--CH---HHH
Confidence 0013457999999999999999999986 689999999987632 22 334
Q ss_pred HHHHHhCCcEEEcCceEEEEeCCc-----EEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHH---hC-C--CCCCc
Q 011476 285 EEKFSRDGIDVKLGSMVVKVTDKE-----IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQ---VG-Q--TNRRA 353 (485)
Q Consensus 285 ~~~l~~~gV~v~~~~~v~~v~~~~-----v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~---~g-~--~~~g~ 353 (485)
.+.+++.||++++++.+.++..+. +.+. ..+|+..++++|.||+|+| ..|+. .+++. +| + +.+|+
T Consensus 190 ~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~-~~~g~~~~~~~D~vv~a~G--~~p~~-~~~~~~~~~g~l~~~~~g~ 265 (315)
T 3r9u_A 190 EKVKKNEKIELITSASVDEVYGDKMGVAGVKVK-LKDGSIRDLNVPGIFTFVG--LNVRN-EILKQDDSKFLCNMEEGGQ 265 (315)
T ss_dssp HHHHHCTTEEEECSCEEEEEEEETTEEEEEEEE-CTTSCEEEECCSCEEECSC--EEECC-GGGBCTTSCBSSCBCTTSC
T ss_pred HHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEE-cCCCCeEEeecCeEEEEEc--CCCCc-hhhhcccccceeeecCCCc
Confidence 456678899999999999997543 4444 3478766799999999999 67887 45444 44 5 67799
Q ss_pred eeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHhhcc
Q 011476 354 LATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKAD 394 (485)
Q Consensus 354 i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~a~ 394 (485)
|.||+++|| +.|+|||+|||+..+...+..++.++..+|.
T Consensus 266 i~vd~~~~t-~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~ 305 (315)
T 3r9u_A 266 VSVDLKMQT-SVAGLFAAGDLRKDAPKQVICAAGDGAVAAL 305 (315)
T ss_dssp BCCCTTCBC-SSTTEEECGGGBTTCCCCHHHHHHHHHHHHH
T ss_pred EEeCCCccc-CCCCEEEeecccCCchhhhhhHHhhHHHHHH
Confidence 999999998 9999999999997666667777777766554
No 47
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=6.7e-35 Score=300.32 Aligned_cols=285 Identities=17% Similarity=0.257 Sum_probs=205.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCcccccc---------------------Cc------ccc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTC---------------------GT------VEA 109 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~---------------------~~------~~~ 109 (485)
..+||+|||||+||+++|..|++.|++|+|||+++.+++.+......+ +. .+.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 468999999999999999999999999999999987776532110000 00 011
Q ss_pred ccc-----------ccchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 110 RSI-----------VEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 110 ~~~-----------~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
..+ ...+...+++.++++ ..+++..++. +.+.+... +++...+.||+||+|||++|+.|
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~~~~--~~~~v~~~------~G~~~~i~~d~lIiAtGs~p~~p 154 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFKKNKVTY--VKGYGKFVSP--SEISVDTI------EGENTVVKGKHIIIATGSDVKSL 154 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EESCEEEEET--TEEEECCS------SSCCEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEEEecC--CEEEEEeC------CCceEEEEcCEEEECCCCCCCCC
Confidence 111 111344566678764 4555555665 44555421 11123799999999999999999
Q ss_pred CCCCCCC-ccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCC
Q 011476 179 NTPGVEE-NCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKV 257 (485)
Q Consensus 179 ~i~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~ 257 (485)
+++|.+. +++ +..++ +. +. ..+++++|||||++|+|+|..|.++
T Consensus 155 ~~~g~~~~~v~---~~~~~----------~~---~~-------~~~~~vvViGgG~~g~e~A~~l~~~------------ 199 (470)
T 1dxl_A 155 PGVTIDEKKIV---SSTGA----------LA---LS-------EIPKKLVVIGAGYIGLEMGSVWGRI------------ 199 (470)
T ss_dssp TTBCCCSSSEE---CHHHH----------TT---CS-------SCCSEEEESCCSHHHHHHHHHHHHH------------
T ss_pred CCCCCCcccEE---eHHHh----------hh---hh-------hcCCeEEEECCCHHHHHHHHHHHHc------------
Confidence 9998753 322 22221 11 11 1246999999999999999999987
Q ss_pred CCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--cEEEEEc--CCCeEEEEecCeEEEccCC
Q 011476 258 KDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--EIFTKVR--GNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 258 ~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~--~v~~~~~--~~G~~~~i~~D~vi~a~G~ 333 (485)
|.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|.+++.+ .+.+... .+|+..++++|.||+|+|
T Consensus 200 --g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G- 276 (470)
T 1dxl_A 200 --GSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAG- 276 (470)
T ss_dssp --TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCC-
T ss_pred --CCcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCC-
Confidence 689999999999999999999999999999999999999999999864 3444321 145333599999999999
Q ss_pred CCCcchHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHhh
Q 011476 334 APHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSK 392 (485)
Q Consensus 334 ~~~p~~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~ 392 (485)
..|++..+ ++.+|+ +.+|+|.||+++|| +.|+|||+|||+..+.. ...+..++..+
T Consensus 277 -~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~~-~~~A~~~g~~a 335 (470)
T 1dxl_A 277 -RTPFTSGLNLDKIGVETDKLGRILVNERFST-NVSGVYAIGDVIPGPML-AHKAEEDGVAC 335 (470)
T ss_dssp -EEECCTTSCCTTTTCCBCSSSCBCCCTTCBC-SSTTEEECSTTSSSCCC-HHHHHHHHHHH
T ss_pred -CCcCCCCCCchhcCCccCCCCCEeECcCCcc-CCCCEEEEeccCCCCcc-HHHHHHHHHHH
Confidence 68888433 677787 45788999999997 99999999999986442 33444444433
No 48
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=1.7e-34 Score=291.35 Aligned_cols=277 Identities=19% Similarity=0.204 Sum_probs=217.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCC--CCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNN--PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~--~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~ 135 (485)
.|||||||||+||+++|.+|++ .+.+|+|||+++++.+.|+++.+..+..+.+++..+++.+. +.|++ +++++|+
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~-~~gv~--~i~~~v~ 78 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLR-AHGIQ--VVHDSAL 78 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHH-HTTCE--EECSCEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHH-HCCCE--EEEeEEE
Confidence 5799999999999999999974 45689999999999999999999888888888887777665 46755 7889999
Q ss_pred EEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCC-----ccccccChhHHHHHHHHHHHHHhhc
Q 011476 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEE-----NCNFLKEVEDAQRIRRNVIESFEKA 210 (485)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (485)
.||++.+.+.+.++. ++.||+||||||++++.+++||.++ .++.++..+++..+++.+...
T Consensus 79 ~id~~~~~v~~~~g~----------~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~---- 144 (401)
T 3vrd_B 79 GIDPDKKLVKTAGGA----------EFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESM---- 144 (401)
T ss_dssp EEETTTTEEEETTSC----------EEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHS----
T ss_pred EEEccCcEEEecccc----------eeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhc----
Confidence 999999999988765 8999999999999999999999863 335677888888888776432
Q ss_pred CCCCCCHHHHhhcccEEEECC-------ChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc--ccccHHHH
Q 011476 211 SLPNLSDEERKRILHFVIVGG-------GPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL--NMFDKRIT 281 (485)
Q Consensus 211 ~~~~~~~~~~~~~~~vvVVGg-------G~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l--~~~~~~~~ 281 (485)
..+ ..+|+++ +..+.|.+..++.+.+. . ..+.+|++++..+.+. +.+++.+.
T Consensus 145 ----------~~~-~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~----~----~~~~~v~i~~~~~~~~~~~~~~~~~~ 205 (401)
T 3vrd_B 145 ----------DDG-GVVIIAPPAPPFRCPPGPYERASQIAHYLKA----H----KSKSKVIILDNSQTFSKQAQFTKGWE 205 (401)
T ss_dssp ----------CTT-CEEEEECCSSSCBCTTHHHHHHHHHHHHHHH----H----CTTCEEEEECSSSSCTTHHHHHHHHH
T ss_pred ----------ccC-CcEEEecCCccEEeehHHHHHHHHHHHHHHh----c----CCCCEEEEEcccccccccccccHHHH
Confidence 122 3344433 33456666666554322 1 2357999999988763 45677787
Q ss_pred HHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC-CCCCceeeCC
Q 011476 282 AFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALATDE 358 (485)
Q Consensus 282 ~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~-~~~g~i~vd~ 358 (485)
+.+.+.+++.||++++++++..++. +...+.. .+|++ +++|+++|++| ..|+ .+++..++ +++|+|.||+
T Consensus 206 ~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~-~~g~~--i~~D~vi~~~g--~~~~--~~~~~~gl~~~~G~i~VD~ 278 (401)
T 3vrd_B 206 RLYGFGTENALIEWHPGPDAAVVKTDTEAMTVET-SFGET--FKAAVINLIPP--QRAG--KIAQSASLTNDSGWCPVDI 278 (401)
T ss_dssp HHSCTTSTTCSEEEECTTTTCEEEEETTTTEEEE-TTSCE--EECSEEEECCC--EEEC--HHHHHTTCCCTTSSBCBCT
T ss_pred HHHHHHHHhcCcEEEeCceEEEEEecccceEEEc-CCCcE--EEeeEEEEecC--cCCc--hhHhhccccccCCCEEECC
Confidence 8888888999999999999888764 3334443 67776 99999999999 5665 46788888 7789999998
Q ss_pred C-ccccCCCCeEEeccccCC
Q 011476 359 W-LRVEGSDSIYALGDCATV 377 (485)
Q Consensus 359 ~-l~t~~~~~Vya~GD~~~~ 377 (485)
+ ||++++|||||+|||+..
T Consensus 279 ~tl~~t~~p~VfAiGDva~~ 298 (401)
T 3vrd_B 279 RTFESSLQPGIHVIGDACNA 298 (401)
T ss_dssp TTCBBSSSTTEEECGGGBCC
T ss_pred CcceecCCCCEEEecccccC
Confidence 6 787799999999999864
No 49
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=1.6e-34 Score=296.64 Aligned_cols=277 Identities=17% Similarity=0.272 Sum_probs=201.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCC----cccc----------------ccC-----ccccccc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPSV----------------TCG-----TVEARSI 112 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~----~~~~----------------~~~-----~~~~~~~ 112 (485)
.+||+|||||+||+++|..|++.|++|+|||+++ +++++. .|.. ..+ ..+...+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 84 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKL 84 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHHH
Confidence 4799999999999999999999999999999987 554321 1110 000 0111111
Q ss_pred cc-----------chHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCC-C
Q 011476 113 VE-----------PVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN-T 180 (485)
Q Consensus 113 ~~-----------~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~-i 180 (485)
.. .+..++++.+++ ++.+++..++. +.+.+. +. .+.||+||||||++|+.|+ +
T Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~~~~--~~v~v~-g~----------~~~~d~lViATGs~p~~p~gi 149 (464)
T 2eq6_A 85 GGWRDQVVKKLTGGVGTLLKGNGVE--LLRGFARLVGP--KEVEVG-GE----------RYGAKSLILATGSEPLELKGF 149 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCE--EEESCEEEEET--TEEEET-TE----------EEEEEEEEECCCEEECCBTTB
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCE--EEeeeEEEccC--CEEEEc-cE----------EEEeCEEEEcCCCCCCCCCCC
Confidence 11 123456677877 45566666664 567664 32 7999999999999998875 7
Q ss_pred CCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCC
Q 011476 181 PGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS 260 (485)
Q Consensus 181 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g 260 (485)
||. ..+ .+..++..+ .. ..+++++|||||++|+|+|..|.++ |
T Consensus 150 ~~~-~~v---~~~~~~~~l----------~~---------~~~~~vvViGgG~~g~e~A~~l~~~--------------g 192 (464)
T 2eq6_A 150 PFG-EDV---WDSTRALKV----------EE---------GLPKRLLVIGGGAVGLELGQVYRRL--------------G 192 (464)
T ss_dssp CCS-SSE---ECHHHHTCG----------GG---------CCCSEEEEECCSHHHHHHHHHHHHT--------------T
T ss_pred CCC-CcE---EcHHHHHhh----------hh---------hcCCEEEEECCCHHHHHHHHHHHHC--------------C
Confidence 772 222 233332211 11 0235999999999999999999987 6
Q ss_pred ceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCC--CeEEEEecCeEEEccCCCCC
Q 011476 261 VKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGN--GETSSMPYGMVVWSTGIAPH 336 (485)
Q Consensus 261 ~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~--G~~~~i~~D~vi~a~G~~~~ 336 (485)
.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|++++. +.+.+....+ |+..++++|.|++|+| ..
T Consensus 193 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G--~~ 270 (464)
T 2eq6_A 193 AEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVG--RK 270 (464)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSC--EE
T ss_pred CeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCC--cc
Confidence 8999999999999999999999999999999999999999999974 3344433214 6644599999999999 68
Q ss_pred cchHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHh
Q 011476 337 AIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFS 391 (485)
Q Consensus 337 p~~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~ 391 (485)
|++..+ ++.+|+ +.+|+|.||+++|| +.|+|||+|||+..+.. ...+..++..
T Consensus 271 p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~l-~~~A~~~g~~ 326 (464)
T 2eq6_A 271 PRTEGLGLEKAGVKVDERGFIRVNARMET-SVPGVYAIGDAARPPLL-AHKAMREGLI 326 (464)
T ss_dssp ESCTTSSHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTCSSCC-HHHHHHHHHH
T ss_pred cCCCCCChhhcCceecCCCCEEECCCccc-CCCCEEEEeccCCCccc-HHHHHHHHHH
Confidence 888544 678887 46789999999998 99999999999986442 3344444443
No 50
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=2.4e-34 Score=279.99 Aligned_cols=275 Identities=14% Similarity=0.116 Sum_probs=199.8
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCC-cEEEEcCCCCcccCCCc----cccc--cCcccccccccchHHHHhhCCCeEEEEE
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRNYFAFTPLL----PSVT--CGTVEARSIVEPVRNIVRKKNVDICFWE 131 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~g~-~V~lie~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~gv~v~~~~ 131 (485)
++|+|||||+||+++|..|++.|+ +|+|||+. .+++.... ..++ .......++...+.+.+.+.++++ ..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~--~~ 78 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKH--EM 78 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEE--EC
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEE--EE
Confidence 689999999999999999999999 99999985 34433211 1111 111233455666777788888775 34
Q ss_pred eEEEEEecCCCEE--EEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCC----ccccccChhHHHHHHHHHHH
Q 011476 132 AECFKIDAENKKV--YCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEE----NCNFLKEVEDAQRIRRNVIE 205 (485)
Q Consensus 132 ~~v~~id~~~~~v--~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~----~~~~~~~~~~~~~~~~~~~~ 205 (485)
+++..++.+.+.+ .+.++. .+.||+||+|||+.|+.|++||.++ .++.+...+ .
T Consensus 79 ~~v~~i~~~~~~~~v~~~~g~----------~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~----------~ 138 (311)
T 2q0l_A 79 TAVQRVSKKDSHFVILAEDGK----------TFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCD----------G 138 (311)
T ss_dssp SCEEEEEEETTEEEEEETTSC----------EEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHHHH----------G
T ss_pred EEEEEEEEcCCEEEEEEcCCC----------EEECCEEEECCCCCCCCCCCCChhhccCCcEEEeecCC----------h
Confidence 7899998877744 333332 7999999999999999999998642 122211100 0
Q ss_pred HHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHH
Q 011476 206 SFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAE 285 (485)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~ 285 (485)
....+++++|||+|++|+|+|..|.+. +.+|+++++.+.+. .++. +.
T Consensus 139 -------------~~~~~~~v~VvG~G~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~~--~~~~----~~ 185 (311)
T 2q0l_A 139 -------------FFYKNKEVAVLGGGDTAVEEAIYLANI--------------CKKVYLIHRRDGFR--CAPI----TL 185 (311)
T ss_dssp -------------GGGTTSEEEEECCSHHHHHHHHHHHTT--------------SSEEEEECSSSSCC--SCHH----HH
T ss_pred -------------hhcCCCEEEEECCCHHHHHHHHHHHhc--------------CCEEEEEeeCCccC--CCHH----HH
Confidence 012457999999999999999999986 68999999988763 2333 33
Q ss_pred HHHH-hCCcEEEcCceEEEEeCC--c---EEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhC----C--CCCCc
Q 011476 286 EKFS-RDGIDVKLGSMVVKVTDK--E---IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVG----Q--TNRRA 353 (485)
Q Consensus 286 ~~l~-~~gV~v~~~~~v~~v~~~--~---v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g----~--~~~g~ 353 (485)
+.+. +.||++++++.++++..+ + +.+....+|+..+++||.||+|+| ..|++ .+++.++ + +.+|+
T Consensus 186 ~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G--~~p~~-~~l~~~g~~~~l~~~~~g~ 262 (311)
T 2q0l_A 186 EHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVG--YDVNN-AVLKQEDNSMLCKCDEYGS 262 (311)
T ss_dssp HHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSC--EEECC-GGGBCTTSCBSSCBCTTSC
T ss_pred HHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEec--CccCh-hhhhcccccceeEeccCCC
Confidence 4454 579999999999999753 3 333332367655699999999999 68887 5666654 5 56799
Q ss_pred eeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHhhc
Q 011476 354 LATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKA 393 (485)
Q Consensus 354 i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~a 393 (485)
|.||+++|| +.|+|||+|||+..+......++.++..+|
T Consensus 263 i~vd~~~~t-~~~~vya~GD~~~~~~~~~~~A~~~g~~aa 301 (311)
T 2q0l_A 263 IVVDFSMKT-NVQGLFAAGDIRIFAPKQVVCAASDGATAA 301 (311)
T ss_dssp BCCCTTCBC-SSTTEEECSTTBTTCCCCHHHHHHHHHHHH
T ss_pred EEeCCcccc-CCCCeEEcccccCcchHHHHHHHHhHHHHH
Confidence 999999998 999999999999875555666666666554
No 51
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-34 Score=296.70 Aligned_cols=268 Identities=20% Similarity=0.281 Sum_probs=199.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCC----cccc--------------------c--------c
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPSV--------------------T--------C 104 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~----~~~~--------------------~--------~ 104 (485)
..+||+|||||+||+++|..|++.|++|+|||++ .+++++. .|.. . .
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEH 88 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccccc
Confidence 3579999999999999999999999999999997 4554321 1100 0 0
Q ss_pred Ccccccccc-----------cchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCC
Q 011476 105 GTVEARSIV-----------EPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGA 173 (485)
Q Consensus 105 ~~~~~~~~~-----------~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~ 173 (485)
...+...+. ..+...+++.+++ ++..++..+++....+...++ +...+.||+||+|||+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~~~~i~~~~~~v~~~~g--------~~~~~~~d~lviAtGs 158 (479)
T 2hqm_A 89 LTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVD--VVFGWARFNKDGNVEVQKRDN--------TTEVYSANHILVATGG 158 (479)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEE--EEEEEEEECTTSCEEEEESSS--------CCEEEEEEEEEECCCE
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEEeeCCEEEEEeCCC--------cEEEEEeCEEEEcCCC
Confidence 001111111 1233455667865 566678777664433433222 1237899999999999
Q ss_pred CCCCC-CCCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHh
Q 011476 174 RANTF-NTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFK 252 (485)
Q Consensus 174 ~~~~~-~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~ 252 (485)
+|+.| ++||.+ .+. +..+.. .. . ..+++++|||||++|+|+|..|.++
T Consensus 159 ~p~~p~~i~g~~-~~~---~~~~~~----------~l---~-------~~~~~vvViGgG~ig~E~A~~l~~~------- 207 (479)
T 2hqm_A 159 KAIFPENIPGFE-LGT---DSDGFF----------RL---E-------EQPKKVVVVGAGYIGIELAGVFHGL------- 207 (479)
T ss_dssp EECCCTTSTTGG-GSB---CHHHHH----------HC---S-------SCCSEEEEECSSHHHHHHHHHHHHT-------
T ss_pred CCCCCCCCCCcc-ccc---chHHHh----------cc---c-------ccCCeEEEECCCHHHHHHHHHHHHc-------
Confidence 99999 899873 222 222211 11 1 1346999999999999999999987
Q ss_pred hCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--c--EEEEEcCCCeEEEEecCeEE
Q 011476 253 LYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--E--IFTKVRGNGETSSMPYGMVV 328 (485)
Q Consensus 253 ~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~--~--v~~~~~~~G~~~~i~~D~vi 328 (485)
|.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|++++.+ + +.+.. .+|+ .++++|.||
T Consensus 208 -------g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~-~~G~-~~i~~D~vv 278 (479)
T 2hqm_A 208 -------GSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHM-NDSK-SIDDVDELI 278 (479)
T ss_dssp -------TCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEE-TTSC-EEEEESEEE
T ss_pred -------CCceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEE-CCCc-EEEEcCEEE
Confidence 689999999999999999999999999999999999999999999752 3 44443 5773 249999999
Q ss_pred EccCCCCCcchHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCC
Q 011476 329 WSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQ 379 (485)
Q Consensus 329 ~a~G~~~~p~~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~ 379 (485)
+|+| ..|++ .| ++.+|+ +.+|+|.||++++| +.|+|||+|||+..+.
T Consensus 279 ~a~G--~~p~~-~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~ 328 (479)
T 2hqm_A 279 WTIG--RKSHL-GMGSENVGIKLNSHDQIIADEYQNT-NVPNIYSLGDVVGKVE 328 (479)
T ss_dssp ECSC--EEECC-CSSGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTTSSC
T ss_pred ECCC--CCCcc-ccChhhcCceECCCCCEeECCCCcc-CCCCEEEEEecCCCcc
Confidence 9999 78988 77 788887 56789999999998 9999999999987544
No 52
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=5.2e-34 Score=292.56 Aligned_cols=273 Identities=21% Similarity=0.298 Sum_probs=202.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCC----ccc--------------------cccC--cccccc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPS--------------------VTCG--TVEARS 111 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~----~~~--------------------~~~~--~~~~~~ 111 (485)
.+||+|||||+||+++|.+|++.|++|+|||++ .+++++. .|. +... ..+...
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWPR 82 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHHH
Confidence 579999999999999999999999999999997 4554321 110 0000 011111
Q ss_pred c-----------ccchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCC
Q 011476 112 I-----------VEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNT 180 (485)
Q Consensus 112 ~-----------~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i 180 (485)
+ ...+...+++.+++ ++.+++..++. +.|.+ ++. .+.||+||||||++|+.|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~~~~i~~--~~v~~-~g~----------~~~~d~lviAtGs~p~~p~i 147 (463)
T 2r9z_A 83 LVAGRDRYIGAINSFWDGYVERLGIT--RVDGHARFVDA--HTIEV-EGQ----------RLSADHIVIATGGRPIVPRL 147 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCE--EEESCEEEEET--TEEEE-TTE----------EEEEEEEEECCCEEECCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCE--EEEeEEEEccC--CEEEE-CCE----------EEEcCEEEECCCCCCCCCCC
Confidence 1 11233445677866 55666777764 56766 332 79999999999999999999
Q ss_pred CCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCC
Q 011476 181 PGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS 260 (485)
Q Consensus 181 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g 260 (485)
||.+ .+. +..+... . . ..+++++|||||++|+|+|..|.++ |
T Consensus 148 ~G~~-~~~---~~~~~~~----------~---~-------~~~~~vvVvGgG~~g~e~A~~l~~~--------------G 189 (463)
T 2r9z_A 148 PGAE-LGI---TSDGFFA----------L---Q-------QQPKRVAIIGAGYIGIELAGLLRSF--------------G 189 (463)
T ss_dssp TTGG-GSB---CHHHHHH----------C---S-------SCCSEEEEECCSHHHHHHHHHHHHT--------------T
T ss_pred CCcc-cee---cHHHHhh----------h---h-------ccCCEEEEECCCHHHHHHHHHHHhc--------------C
Confidence 9973 222 2222111 1 1 1235999999999999999999987 6
Q ss_pred ceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCCCCCcc
Q 011476 261 VKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAI 338 (485)
Q Consensus 261 ~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~ 338 (485)
.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|++++. +++.+.. .+|+. ++++|.|++|+| ..|+
T Consensus 190 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~-~~G~~-~i~~D~vv~a~G--~~p~ 265 (463)
T 2r9z_A 190 SEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVA-QDGTR-LEGFDSVIWAVG--RAPN 265 (463)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEE-TTCCE-EEEESEEEECSC--EEES
T ss_pred CEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEE-eCCcE-EEEcCEEEECCC--CCcC
Confidence 8999999999999999999999999999999999999999999974 3444443 57762 499999999999 6888
Q ss_pred hHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHH
Q 011476 339 IKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIF 390 (485)
Q Consensus 339 ~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~ 390 (485)
+..| ++.+|+ +.+|+|.||+++|| +.|+|||+|||+..+.. ...+..++.
T Consensus 266 ~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~~-~~~A~~~g~ 318 (463)
T 2r9z_A 266 TRDLGLEAAGIEVQSNGMVPTDAYQNT-NVPGVYALGDITGRDQL-TPVAIAAGR 318 (463)
T ss_dssp CTTSCHHHHTCCCCTTSCCCCCTTSBC-SSTTEEECGGGGTSCCC-HHHHHHHHH
T ss_pred CCCCCchhcCCccCCCCCEeECCCCcc-CCCCEEEEeecCCCccc-HHHHHHHHH
Confidence 8545 677787 56889999999997 99999999999875432 333444443
No 53
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3e-34 Score=277.06 Aligned_cols=271 Identities=13% Similarity=0.158 Sum_probs=201.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCC-Ccccccc-CcccccccccchHHHHhhC-CCeEEEEEeEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP-LLPSVTC-GTVEARSIVEPVRNIVRKK-NVDICFWEAEC 134 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~-gv~v~~~~~~v 134 (485)
+++|+|||||+||+++|.+|++.|++|+|||+++..+..+ ....+.. ......++...+.+.+.++ ++ +++.++|
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~v 79 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTI--HWVEGRV 79 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTE--EEEESCE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCe--EEEEeEE
Confidence 4799999999999999999999999999999886544332 1222221 2234456667777788776 54 4678899
Q ss_pred EEEecCCCEEEE--ecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCCc---cccccChhHHHHHHHHHHHHHhh
Q 011476 135 FKIDAENKKVYC--RSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEEN---CNFLKEVEDAQRIRRNVIESFEK 209 (485)
Q Consensus 135 ~~id~~~~~v~~--~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 209 (485)
..++++.+.+.+ .++. .+.||+||+|||+.|+.|++||.+.. ........+ .
T Consensus 80 ~~i~~~~~~~~v~~~~g~----------~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~------~------- 136 (297)
T 3fbs_A 80 TDAKGSFGEFIVEIDGGR----------RETAGRLILAMGVTDELPEIAGLRERWGSAVFHCPYCH------G------- 136 (297)
T ss_dssp EEEEEETTEEEEEETTSC----------EEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCHHHH------T-------
T ss_pred EEEEEcCCeEEEEECCCC----------EEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcccCc------c-------
Confidence 999987664444 3332 79999999999999999999997531 111111000 0
Q ss_pred cCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHH
Q 011476 210 ASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFS 289 (485)
Q Consensus 210 ~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~ 289 (485)
....+++++|||+|++|+|+|..|.++ + +|+++++.+.. + ...+.+.++
T Consensus 137 ---------~~~~~~~v~vvG~G~~~~e~a~~l~~~--------------g-~v~~v~~~~~~---~----~~~~~~~l~ 185 (297)
T 3fbs_A 137 ---------YELDQGKIGVIAASPMAIHHALMLPDW--------------G-ETTFFTNGIVE---P----DADQHALLA 185 (297)
T ss_dssp ---------GGGTTCEEEEECCSTTHHHHHHHGGGT--------------S-EEEEECTTTCC---C----CHHHHHHHH
T ss_pred ---------hhhcCCEEEEEecCccHHHHHHHhhhc--------------C-cEEEEECCCCC---C----CHHHHHHHH
Confidence 012457999999999999999999885 6 99999988752 2 344567889
Q ss_pred hCCcEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCCC----CCC-ceeeCCCccccC
Q 011476 290 RDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQT----NRR-ALATDEWLRVEG 364 (485)
Q Consensus 290 ~~gV~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~~----~~g-~i~vd~~l~t~~ 364 (485)
+.||+++. +.|++++.++ .+. +.+|++ +++|.|++|+| ..|+. .|++.+++. .+| +|.||++++| +
T Consensus 186 ~~gv~i~~-~~v~~i~~~~-~v~-~~~g~~--~~~D~vi~a~G--~~p~~-~~~~~~g~~~~~~~~G~~i~vd~~~~t-~ 256 (297)
T 3fbs_A 186 ARGVRVET-TRIREIAGHA-DVV-LADGRS--IALAGLFTQPK--LRITV-DWIEKLGCAVEEGPMGSTIVTDPMKQT-T 256 (297)
T ss_dssp HTTCEEEC-SCEEEEETTE-EEE-ETTSCE--EEESEEEECCE--EECCC-SCHHHHTCCEEEETTEEEECCCTTCBC-S
T ss_pred HCCcEEEc-ceeeeeecCC-eEE-eCCCCE--EEEEEEEEccC--cccCc-hhHHhcCCccccCCCCceEEeCCCCcc-C
Confidence 99999996 8999998875 333 356765 99999999999 67777 678888872 356 8999999997 9
Q ss_pred CCCeEEeccccCCCCcchHHHHHHHHhhcc
Q 011476 365 SDSIYALGDCATVNQRRVMEDIAAIFSKAD 394 (485)
Q Consensus 365 ~~~Vya~GD~~~~~~~~~~~~~~~~~~~a~ 394 (485)
.|+|||+|||+..+ .....++.++..+|.
T Consensus 257 ~~~vya~GD~~~~~-~~~~~A~~~g~~aa~ 285 (297)
T 3fbs_A 257 ARGIFACGDVARPA-GSVALAVGDGAMAGA 285 (297)
T ss_dssp STTEEECSGGGCTT-CCHHHHHHHHHHHHH
T ss_pred CCCEEEEeecCCch-HHHHHHHHhHHHHHH
Confidence 99999999999863 346666766665543
No 54
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=3.5e-34 Score=295.60 Aligned_cols=286 Identities=18% Similarity=0.264 Sum_probs=201.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCc----cc---------------c-ccC------cccccc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PS---------------V-TCG------TVEARS 111 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~----~~---------------~-~~~------~~~~~~ 111 (485)
.+||+|||||+||+++|..|++.|++|+|||+++.+++++.. |. . ..+ ..+...
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~~ 85 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDM 85 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 579999999999999999999999999999997777653211 10 0 000 011111
Q ss_pred ccc-----------chHHHHhhCCCeEEEEEeEEEEEecCCCEEEEe--cCCc--cCCCCCceEEeecCEEEEccCCCCC
Q 011476 112 IVE-----------PVRNIVRKKNVDICFWEAECFKIDAENKKVYCR--SSQN--TNLNGKEEFCMDYDYLVIAMGARAN 176 (485)
Q Consensus 112 ~~~-----------~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~--~~~~--~~~~~~~~~~~~yd~lviAtG~~~~ 176 (485)
+.. .+...+++.++++ +.+.+..++. +.+.+. ++.. ....+++...+.||+||+|||++|+
T Consensus 86 ~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~~~~--~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~ 161 (482)
T 1ojt_A 86 LRAYKDGVVSRLTGGLAGMAKSRKVDV--IQGDGQFLDP--HHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVT 161 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEE--EEEEEEEEET--TEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEE--EeeEEEEccC--CEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCC
Confidence 111 1334566778774 4454555554 455543 2200 0000011237999999999999998
Q ss_pred CCC-CCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCc
Q 011476 177 TFN-TPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYP 255 (485)
Q Consensus 177 ~~~-i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p 255 (485)
.|+ +| .+.. +.+..++.. +. ..+++++|||||++|+|+|..|.++
T Consensus 162 ~~~~i~-~~~~---v~~~~~~~~-------------~~-------~~~~~vvViGgG~ig~E~A~~l~~~---------- 207 (482)
T 1ojt_A 162 KLPFIP-EDPR---IIDSSGALA-------------LK-------EVPGKLLIIGGGIIGLEMGTVYSTL---------- 207 (482)
T ss_dssp CCSSCC-CCTT---EECHHHHTT-------------CC-------CCCSEEEEESCSHHHHHHHHHHHHH----------
T ss_pred CCCCCC-ccCc---EEcHHHHhc-------------cc-------ccCCeEEEECCCHHHHHHHHHHHHc----------
Confidence 876 66 3332 223332211 11 1246999999999999999999987
Q ss_pred CCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--cEEEEEcCC----CeEEEEecCeEEE
Q 011476 256 KVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--EIFTKVRGN----GETSSMPYGMVVW 329 (485)
Q Consensus 256 ~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~--~v~~~~~~~----G~~~~i~~D~vi~ 329 (485)
|.+||++++.+++++.+++++.+.+.+.+++.||+++++++|++++.+ .+.+.. .+ |++ +++|.|++
T Consensus 208 ----G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~-~~~~~~g~~--~~~D~vv~ 280 (482)
T 1ojt_A 208 ----GSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTF-EGANAPKEP--QRYDAVLV 280 (482)
T ss_dssp ----TCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEE-ESSSCCSSC--EEESCEEE
T ss_pred ----CCeEEEEEECCccccccCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEE-eccCCCceE--EEcCEEEE
Confidence 689999999999999999999999999999999999999999999743 343433 23 544 88999999
Q ss_pred ccCCCCCcchHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHhh
Q 011476 330 STGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSK 392 (485)
Q Consensus 330 a~G~~~~p~~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~ 392 (485)
|+| ..|++..| ++.+|+ +.+|+|.||+++|| +.|+|||+|||+..+.. ...+..++..+
T Consensus 281 a~G--~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~l-~~~A~~~g~~a 342 (482)
T 1ojt_A 281 AAG--RAPNGKLISAEKAGVAVTDRGFIEVDKQMRT-NVPHIYAIGDIVGQPML-AHKAVHEGHVA 342 (482)
T ss_dssp CCC--EEECGGGTTGGGTTCCCCTTSCCCCCTTSBC-SSTTEEECGGGTCSSCC-HHHHHHHHHHH
T ss_pred CcC--CCcCCCCCChhhcCceeCCCCCEeeCCCccc-CCCCEEEEEcccCCCcc-HHHHHHHHHHH
Confidence 999 78998544 688887 45688999999998 99999999999986442 34444444433
No 55
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=7.2e-35 Score=301.86 Aligned_cols=269 Identities=18% Similarity=0.345 Sum_probs=188.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCC----cccc----------------ccC-----ccccc--
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPSV----------------TCG-----TVEAR-- 110 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~----~~~~----------------~~~-----~~~~~-- 110 (485)
.+||+|||||+||+++|..|++.|++|+|||+++ +++++. .|.. ..+ ..+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 80 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLL 80 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHHH
Confidence 4799999999999999999999999999999985 444321 1110 000 01111
Q ss_pred ---------ccccchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCcc---CCCCCceEEeecCEEEEccCCCCCCC
Q 011476 111 ---------SIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNT---NLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 111 ---------~~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~---~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
.+...+...+++.+++ ++..++..++. +.+.+.+.... ...+++...+.||+||||||++|+.|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~~~~id~--~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~p 156 (500)
T 1onf_A 81 VERRDKYIQRLNNIYRQNLSKDKVD--LYEGTASFLSE--NRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFP 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCE--EEESCCCCC----------------------------CBSSEEECCCCCBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEEeeC--CEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCCC
Confidence 1112234556677876 45555555554 45555330000 00000012789999999999999999
Q ss_pred CCCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCC
Q 011476 179 NTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVK 258 (485)
Q Consensus 179 ~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~ 258 (485)
++||.+ .+. +..++ +. +. . +++++|||||++|+|+|..|.++
T Consensus 157 ~i~G~~-~~~---~~~~~----------~~---~~-------~-~~~vvViGgG~ig~E~A~~l~~~------------- 198 (500)
T 1onf_A 157 PVKGIE-NTI---SSDEF----------FN---IK-------E-SKKIGIVGSGYIAVELINVIKRL------------- 198 (500)
T ss_dssp SCTTGG-GCE---EHHHH----------TT---CC-------C-CSEEEEECCSHHHHHHHHHHHTT-------------
T ss_pred CCCCCC-ccc---CHHHH----------hc---cC-------C-CCeEEEECChHHHHHHHHHHHHc-------------
Confidence 999973 222 11111 11 11 1 46999999999999999999987
Q ss_pred CCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--c-EEEEEcCCCeEEEEecCeEEEccCCCC
Q 011476 259 DSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--E-IFTKVRGNGETSSMPYGMVVWSTGIAP 335 (485)
Q Consensus 259 ~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~--~-v~~~~~~~G~~~~i~~D~vi~a~G~~~ 335 (485)
|.+||++++.+++++.+++++.+.+.+.+++.||+++++++|++++.+ + +.+.. .+|++ ++++|.||+|+| .
T Consensus 199 -g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~-~~g~~-~~~~D~vi~a~G--~ 273 (500)
T 1onf_A 199 -GIDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHL-SDGRI-YEHFDHVIYCVG--R 273 (500)
T ss_dssp -TCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEE-TTSCE-EEEESEEEECCC--B
T ss_pred -CCeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEE-CCCcE-EEECCEEEECCC--C
Confidence 689999999999999999999999999999999999999999999743 3 45544 56764 489999999999 6
Q ss_pred CcchHHH-HHHhCC-CCCCceeeCCCccccCCCCeEEecccc
Q 011476 336 HAIIKDF-MKQVGQ-TNRRALATDEWLRVEGSDSIYALGDCA 375 (485)
Q Consensus 336 ~p~~~~l-~~~~g~-~~~g~i~vd~~l~t~~~~~Vya~GD~~ 375 (485)
.|+++.| ++.+|+ ..+|+|.||+++|| +.|+|||+|||+
T Consensus 274 ~p~~~~l~~~~~g~~~~~G~i~vd~~~~t-~~~~iya~GD~~ 314 (500)
T 1onf_A 274 SPDTENLKLEKLNVETNNNYIVVDENQRT-SVNNIYAVGDCC 314 (500)
T ss_dssp CCTTTTSSCTTTTCCBSSSCEEECTTCBC-SSSSEEECSTTE
T ss_pred CcCCCCCCchhcCccccCCEEEECCCccc-CCCCEEEEeccc
Confidence 8888556 677777 35788999999997 999999999999
No 56
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=6.9e-34 Score=277.80 Aligned_cols=278 Identities=16% Similarity=0.203 Sum_probs=202.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCc----ccccc-CcccccccccchHHHHhhCCCeEEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PSVTC-GTVEARSIVEPVRNIVRKKNVDICFWE 131 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~gv~v~~~~ 131 (485)
..++|+|||||+||+++|..|++.|++|+|||+. .+++.... ..++. ......++...+.+.+++.++++ ..
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~ 91 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIR--EG 91 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEE--ET
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEE--EE
Confidence 3579999999999999999999999999999985 34443211 11111 11222345556677777888664 44
Q ss_pred eEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCCc----cccccChhHHHHHHHHHHHHH
Q 011476 132 AECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEEN----CNFLKEVEDAQRIRRNVIESF 207 (485)
Q Consensus 132 ~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~----~~~~~~~~~~~~~~~~~~~~~ 207 (485)
.++..++...+.+.+... +. .+.||+||+|||+.|+.|++||.+.. ++.+... + .
T Consensus 92 ~~v~~i~~~~~~~~v~~~------~~---~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~-~---------~-- 150 (319)
T 3cty_A 92 VEVRSIKKTQGGFDIETN------DD---TYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTC-D---------G-- 150 (319)
T ss_dssp CCEEEEEEETTEEEEEES------SS---EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHH-H---------G--
T ss_pred eeEEEEEEeCCEEEEEEC------CC---EEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEec-c---------h--
Confidence 789999877675444321 11 78999999999999999999987531 1111110 0 0
Q ss_pred hhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHH
Q 011476 208 EKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEK 287 (485)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~ 287 (485)
....+++++|||+|++|+|+|..|.++ +.+|+++++.+.+.. + ..+.+.
T Consensus 151 -----------~~~~~~~v~viG~G~~g~e~a~~l~~~--------------g~~V~~i~~~~~~~~--~----~~l~~~ 199 (319)
T 3cty_A 151 -----------YLFKGKRVVTIGGGNSGAIAAISMSEY--------------VKNVTIIEYMPKYMC--E----NAYVQE 199 (319)
T ss_dssp -----------GGGBTSEEEEECCSHHHHHHHHHHTTT--------------BSEEEEECSSSSCCS--C----HHHHHH
T ss_pred -----------hhcCCCeEEEECCCHHHHHHHHHHHhh--------------CCcEEEEEcCCccCC--C----HHHHHH
Confidence 013457999999999999999999886 689999999887642 2 234566
Q ss_pred HHhCCcEEEcCceEEEEeCC-c----EEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC--CCCCceeeCCCc
Q 011476 288 FSRDGIDVKLGSMVVKVTDK-E----IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWL 360 (485)
Q Consensus 288 l~~~gV~v~~~~~v~~v~~~-~----v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~--~~~g~i~vd~~l 360 (485)
+++.||+++++++++++..+ + +.+....+|+..++++|.||+|+| ..|++ .+++.+|+ +.+|+|.||+++
T Consensus 200 l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G--~~p~~-~~l~~~gl~~~~~g~i~vd~~~ 276 (319)
T 3cty_A 200 IKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVG--LIPQT-SFLKDSGVKLDERGYIVVDSRQ 276 (319)
T ss_dssp HHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCC--EEECC-GGGTTSCCCBCTTSCBCCCTTC
T ss_pred HhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeC--CccCh-HHHhhccccccCCccEeCCCCC
Confidence 77899999999999999754 2 334332367655699999999999 68888 67777777 567999999999
Q ss_pred cccCCCCeEEeccccCCCCcchHHHHHHHHhhc
Q 011476 361 RVEGSDSIYALGDCATVNQRRVMEDIAAIFSKA 393 (485)
Q Consensus 361 ~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~a 393 (485)
+| +.|+|||+|||+..+......++.++..+|
T Consensus 277 ~t-~~~~vya~GD~~~~~~~~~~~A~~~g~~aa 308 (319)
T 3cty_A 277 RT-SVPGVYAAGDVTSGNFAQIASAVGDGCKAA 308 (319)
T ss_dssp BC-SSTTEEECSTTBTTCCCCHHHHHHHHHHHH
T ss_pred cc-CCCCEEEeecccCcchhhHHHHHHHHHHHH
Confidence 97 999999999999875555666666666554
No 57
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=3.1e-34 Score=295.90 Aligned_cols=278 Identities=20% Similarity=0.230 Sum_probs=204.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccc------------------------ccc--Cccccc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPS------------------------VTC--GTVEAR 110 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~------------------------~~~--~~~~~~ 110 (485)
..+||+||||||||+++|..|++.|++|+|||++ .+++++.... +.. ...+..
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 97 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWR 97 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCHH
Confidence 3589999999999999999999999999999976 4554321100 000 001111
Q ss_pred -----------ccccchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC-
Q 011476 111 -----------SIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF- 178 (485)
Q Consensus 111 -----------~~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~- 178 (485)
.+...+...++..+++ ++.+++..++.....+.. ++. .+.||+||||||+.|+.|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~~~~~~~~~~~v~~-~g~----------~~~~d~lviAtG~~p~~p~ 164 (478)
T 3dk9_A 98 VIKEKRDAYVSRLNAIYQNNLTKSHIE--IIRGHAAFTSDPKPTIEV-SGK----------KYTAPHILIATGGMPSTPH 164 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESCEEECSCSSCEEEE-TTE----------EEECSCEEECCCEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcE--EEEeEEEEeeCCeEEEEE-CCE----------EEEeeEEEEccCCCCCCCC
Confidence 1112234455667866 567778888776666652 222 799999999999999998
Q ss_pred --CCCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcC
Q 011476 179 --NTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPK 256 (485)
Q Consensus 179 --~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~ 256 (485)
++||.+ .+. +..+ .+. +.. .+++++|||||++|+|+|..+.++
T Consensus 165 ~~~i~G~~-~~~---~~~~----------~~~---~~~-------~~~~vvViGgG~~g~E~A~~l~~~----------- 209 (478)
T 3dk9_A 165 ESQIPGAS-LGI---TSDG----------FFQ---LEE-------LPGRSVIVGAGYIAVEMAGILSAL----------- 209 (478)
T ss_dssp TTTSTTGG-GSB---CHHH----------HTT---CCS-------CCSEEEEECCSHHHHHHHHHHHHT-----------
T ss_pred cCCCCCCc-eeE---chHH----------hhc---hhh-------cCccEEEECCCHHHHHHHHHHHHc-----------
Confidence 899974 211 1111 111 111 235999999999999999999987
Q ss_pred CCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--Cc--EEEEEcCC--CeE--EEEecCeEE
Q 011476 257 VKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KE--IFTKVRGN--GET--SSMPYGMVV 328 (485)
Q Consensus 257 ~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~--v~~~~~~~--G~~--~~i~~D~vi 328 (485)
|.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|++++. ++ +.+..... |+. .++++|.|+
T Consensus 210 ---g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi 286 (478)
T 3dk9_A 210 ---GSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLL 286 (478)
T ss_dssp ---TCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEE
T ss_pred ---CCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEE
Confidence 68999999999999999999999999999999999999999999974 33 44443221 322 459999999
Q ss_pred EccCCCCCcchHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHH
Q 011476 329 WSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIF 390 (485)
Q Consensus 329 ~a~G~~~~p~~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~ 390 (485)
+|+| ..|++..| ++.+|+ +.+|+|.||++++| +.|+|||+|||+..+.. ...+..++.
T Consensus 287 ~a~G--~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~~-~~~A~~~g~ 347 (478)
T 3dk9_A 287 WAIG--RVPNTKDLSLNKLGIQTDDKGHIIVDEFQNT-NVKGIYAVGDVCGKALL-TPVAIAAGR 347 (478)
T ss_dssp ECSC--EEESCTTSCGGGGTCCBCTTCCBCCCTTCBC-SSTTEEECGGGGCSSCC-HHHHHHHHH
T ss_pred Eeec--cccCCCCCCchhcCCeeCCCCCEeeCCCccc-CCCCEEEEEecCCCCcc-HhHHHHHHH
Confidence 9999 78888556 788887 57899999999998 99999999999965443 333444443
No 58
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.8e-34 Score=299.00 Aligned_cols=281 Identities=20% Similarity=0.281 Sum_probs=206.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC---CCcEEEEcCCCCcccCCCc----cc---------------c-ccCc--------
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNP---SYDVQVISPRNYFAFTPLL----PS---------------V-TCGT-------- 106 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~---g~~V~lie~~~~~~~~~~~----~~---------------~-~~~~-------- 106 (485)
.+||+|||||+||+++|++|++. |++|+|||+++ +|++... |. + ..+.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 47999999999999999999977 99999999987 5553211 10 0 0011
Q ss_pred cccccc-----------ccchHHHHhhCCCeEEEEEeEEEEEecC----CCEEEEecCCccCCCCCceEEeecCEEEEcc
Q 011476 107 VEARSI-----------VEPVRNIVRKKNVDICFWEAECFKIDAE----NKKVYCRSSQNTNLNGKEEFCMDYDYLVIAM 171 (485)
Q Consensus 107 ~~~~~~-----------~~~~~~~~~~~gv~v~~~~~~v~~id~~----~~~v~~~~~~~~~~~~~~~~~~~yd~lviAt 171 (485)
.+...+ ...+.+++++.+++ ++..++..+++. .+.+.+... +++...+.||+||+||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~~~~i~~~~~~~~~~~~V~~~------~g~~~~~~~d~lviAT 152 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGVQ--VIAGRGELIDSTPGLARHRIKATAA------DGSTSEHEADVVLVAT 152 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESEEEECCSSSCCSSEEEEEECT------TSCEEEEEESEEEECC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEEecCcccCCCCEEEEEeC------CCcEEEEEeCEEEEcC
Confidence 111111 12245667778877 456678888772 245555432 1112378999999999
Q ss_pred CCCCCCCCCCCCCC-ccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHH
Q 011476 172 GARANTFNTPGVEE-NCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDL 250 (485)
Q Consensus 172 G~~~~~~~i~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~ 250 (485)
|+.|+.|++||.+. +++...+. + .+. ..+++++|||||++|+|+|..+.++
T Consensus 153 Gs~p~~p~i~g~~~~~v~~~~~~-------------~---~~~-------~~~~~vvViGgG~ig~E~A~~l~~~----- 204 (499)
T 1xdi_A 153 GASPRILPSAQPDGERILTWRQL-------------Y---DLD-------ALPDHLIVVGSGVTGAEFVDAYTEL----- 204 (499)
T ss_dssp CEEECCCGGGCCCSSSEEEGGGG-------------G---GCS-------SCCSSEEEESCSHHHHHHHHHHHHT-----
T ss_pred CCCCCCCCCCCCCcCcEEehhHh-------------h---hhh-------ccCCeEEEECCCHHHHHHHHHHHHc-----
Confidence 99999999999753 23322211 1 111 1235999999999999999999987
Q ss_pred HhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--cEEEEEcCCCeEEEEecCeEE
Q 011476 251 FKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVV 328 (485)
Q Consensus 251 ~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~--~v~~~~~~~G~~~~i~~D~vi 328 (485)
+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|++++.+ ++.+.. .+|++ +++|.||
T Consensus 205 ---------g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~-~~g~~--i~aD~Vv 272 (499)
T 1xdi_A 205 ---------GVPVTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTM-TDGRT--VEGSHAL 272 (499)
T ss_dssp ---------TCCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEE-TTSCE--EEESEEE
T ss_pred ---------CCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEE-CCCcE--EEcCEEE
Confidence 689999999999999999999999999999999999999999999753 365554 56665 9999999
Q ss_pred EccCCCCCcchHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHh
Q 011476 329 WSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFS 391 (485)
Q Consensus 329 ~a~G~~~~p~~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~ 391 (485)
+|+| ..|++..| ++.+|+ +.+|+|.||+++|| +.|+|||+|||+..+.. ...+..++..
T Consensus 273 ~a~G--~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~~~l-~~~A~~~g~~ 334 (499)
T 1xdi_A 273 MTIG--SVPNTSGLGLERVGIQLGRGNYLTVDRVSRT-LATGIYAAGDCTGLLPL-ASVAAMQGRI 334 (499)
T ss_dssp ECCC--EEECCSSSCTTTTTCCCBTTTBCCCCSSSBC-SSTTEEECSGGGTSCSC-HHHHHHHHHH
T ss_pred ECCC--CCcCCCcCCchhcCceECCCCCEEECCCccc-CCCCEEEEeccCCCccc-HHHHHHHHHH
Confidence 9999 68888332 677777 56789999999998 99999999999986542 3334444443
No 59
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=7.5e-34 Score=293.27 Aligned_cols=283 Identities=20% Similarity=0.247 Sum_probs=200.9
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC---C------CcccCCCcccc------------------------
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR---N------YFAFTPLLPSV------------------------ 102 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~---~------~~~~~~~~~~~------------------------ 102 (485)
...+||+||||||||++||.+|++.|++|+|||+. + .+|++++....
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 86 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGW 86 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCc
Confidence 34689999999999999999999999999999942 1 24543221100
Q ss_pred cc---Cccccccccc-----------chHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEE
Q 011476 103 TC---GTVEARSIVE-----------PVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLV 168 (485)
Q Consensus 103 ~~---~~~~~~~~~~-----------~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lv 168 (485)
.. ...+...+.. .+...++..+++ ++.+.+..+++. .+.+.... + ...+.||+||
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g~a~~~~~~--~v~v~~~~------g-~~~~~~d~lv 155 (483)
T 3dgh_A 87 NVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVE--YINGLGSFVDSH--TLLAKLKS------G-ERTITAQTFV 155 (483)
T ss_dssp CCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EECSEEEEEETT--EEEEECTT------C-CEEEEEEEEE
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEEccCC--EEEEEeCC------C-eEEEEcCEEE
Confidence 00 0111111111 122345667765 678888888764 34443221 1 1479999999
Q ss_pred EccCCCCCCCCCCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHH
Q 011476 169 IAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDE 248 (485)
Q Consensus 169 iAtG~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~ 248 (485)
||||++|+.|++||.++..+ +..+ .+. ++. .+++++|||||++|+|+|..+.++
T Consensus 156 iATGs~p~~p~i~G~~~~~~---~~~~----------~~~---~~~-------~~~~vvViGgG~~g~E~A~~l~~~--- 209 (483)
T 3dgh_A 156 IAVGGRPRYPDIPGAVEYGI---TSDD----------LFS---LDR-------EPGKTLVVGAGYIGLECAGFLKGL--- 209 (483)
T ss_dssp ECCCEEECCCSSTTHHHHCB---CHHH----------HTT---CSS-------CCCEEEEECCSHHHHHHHHHHHHT---
T ss_pred EeCCCCcCCCCCCCcccccC---cHHH----------Hhh---hhh-------cCCcEEEECCCHHHHHHHHHHHHc---
Confidence 99999999999999753322 1111 111 221 235999999999999999999997
Q ss_pred HHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--C-cE--EEEEcCCCeEEEEe
Q 011476 249 DLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--K-EI--FTKVRGNGETSSMP 323 (485)
Q Consensus 249 ~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~-~v--~~~~~~~G~~~~i~ 323 (485)
|.+|+++++ +.+++.+++++.+.+.+.+++.||++++++.|.+++. + .+ .+....+|+..+++
T Consensus 210 -----------g~~Vtlv~~-~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~ 277 (483)
T 3dgh_A 210 -----------GYEPTVMVR-SIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDV 277 (483)
T ss_dssp -----------TCEEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEE
T ss_pred -----------CCEEEEEeC-CCCCcccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEE
Confidence 689999998 5678889999999999999999999999999999974 3 23 33332234455699
Q ss_pred cCeEEEccCCCCCcchHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHh
Q 011476 324 YGMVVWSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFS 391 (485)
Q Consensus 324 ~D~vi~a~G~~~~p~~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~ 391 (485)
+|.|++|+| ..|++..+ ++.+|+ +. |+|.||+++|| +.|+|||+|||+.........+..++..
T Consensus 278 ~D~vi~a~G--~~p~~~~l~l~~~gl~~~~-G~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~~~A~~~g~~ 344 (483)
T 3dgh_A 278 YDTVLWAIG--RKGLVDDLNLPNAGVTVQK-DKIPVDSQEAT-NVANIYAVGDIIYGKPELTPVAVLAGRL 344 (483)
T ss_dssp ESEEEECSC--EEECCGGGTGGGTTCCCBT-TBBCCCTTCBC-SSTTEEECSTTBTTSCCCHHHHHHHHHH
T ss_pred cCEEEECcc--cccCcCcCCchhcCccccC-CEEEECcCCcc-CCCCEEEEEcccCCCCccHHHHHHHHHH
Confidence 999999999 78888544 477787 44 99999999998 9999999999985433334444444443
No 60
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=5.8e-34 Score=279.48 Aligned_cols=277 Identities=13% Similarity=0.205 Sum_probs=205.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCC--cccc----ccC--cccccccccchHHHHhhCCCeEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL--LPSV----TCG--TVEARSIVEPVRNIVRKKNVDICF 129 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~--~~~~----~~~--~~~~~~~~~~~~~~~~~~gv~v~~ 129 (485)
.++|+|||||+||+++|+.|++.|++|+|||+++.+++... .+.. ..+ .....++...+.+.+.+++++++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 85 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTIC- 85 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEE-
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEE-
Confidence 47999999999999999999999999999999988775321 1110 111 11234666778888888887763
Q ss_pred EEeEEEEEecCCC---EEEEecCCccCCCCCceEEeecCEEEEccCC---CCCCCCCCCCCC---ccccccChhHHHHHH
Q 011476 130 WEAECFKIDAENK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGA---RANTFNTPGVEE---NCNFLKEVEDAQRIR 200 (485)
Q Consensus 130 ~~~~v~~id~~~~---~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~---~~~~~~i~G~~~---~~~~~~~~~~~~~~~ 200 (485)
.+++|..++...+ .+.+.++ ++.||+||+|||+ .|+.|++||.+. ..... .+.+
T Consensus 86 ~~~~v~~i~~~~~~~~~v~~~~g-----------~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~-~~~~----- 148 (332)
T 3lzw_A 86 LEQAVESVEKQADGVFKLVTNEE-----------THYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY-FVDD----- 148 (332)
T ss_dssp CSCCEEEEEECTTSCEEEEESSE-----------EEEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES-SCSC-----
T ss_pred ccCEEEEEEECCCCcEEEEECCC-----------EEEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE-ecCC-----
Confidence 5788999998776 4444321 5899999999999 888899999753 11111 1111
Q ss_pred HHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHH
Q 011476 201 RNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRI 280 (485)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~ 280 (485)
....++++++|||+|++|+|+|..|.+. +.+|+++++.+.+.+. +.
T Consensus 149 -----------------~~~~~~~~v~vvG~g~~~~e~a~~l~~~--------------~~~v~~~~~~~~~~~~-~~-- 194 (332)
T 3lzw_A 149 -----------------LQKFAGRRVAILGGGDSAVDWALMLEPI--------------AKEVSIIHRRDKFRAH-EH-- 194 (332)
T ss_dssp -----------------GGGGBTCEEEEECSSHHHHHHHHHHTTT--------------BSEEEEECSSSSCSSC-HH--
T ss_pred -----------------HHHcCCCEEEEECCCHhHHHHHHHHHhh--------------CCeEEEEEecCcCCcc-HH--
Confidence 1112467999999999999999999886 6899999999887432 22
Q ss_pred HHHHHHHHHhCCcEEEcCceEEEEeCCc----EEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC-CCCCcee
Q 011476 281 TAFAEEKFSRDGIDVKLGSMVVKVTDKE----IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALA 355 (485)
Q Consensus 281 ~~~~~~~l~~~gV~v~~~~~v~~v~~~~----v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~-~~~g~i~ 355 (485)
..+.+++.||++++++.+.+++.+. +.+....+|+..++++|.||+|+| ..|+. .+++.+++ ..+|+|.
T Consensus 195 ---~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G--~~p~~-~~~~~~~~~~~~g~i~ 268 (332)
T 3lzw_A 195 ---SVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYG--FVSSL-GPIKNWGLDIEKNSIV 268 (332)
T ss_dssp ---HHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCC--EECCC-GGGGGSSCCEETTEEE
T ss_pred ---HHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeec--cCCCc-hHHhhcCccccCCeEE
Confidence 2355788999999999999998653 666654455556799999999999 67877 67788887 4678999
Q ss_pred eCCCccccCCCCeEEeccccCCC--CcchHHHHHHHHhhc
Q 011476 356 TDEWLRVEGSDSIYALGDCATVN--QRRVMEDIAAIFSKA 393 (485)
Q Consensus 356 vd~~l~t~~~~~Vya~GD~~~~~--~~~~~~~~~~~~~~a 393 (485)
||++++| +.|+|||+|||+..+ ......++.++..+|
T Consensus 269 vd~~~~t-~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa 307 (332)
T 3lzw_A 269 VKSTMET-NIEGFFAAGDICTYEGKVNLIASGFGEAPTAV 307 (332)
T ss_dssp CCTTSBC-SSTTEEECGGGEECTTCCCCHHHHHHHHHHHH
T ss_pred eCCCCce-ecCCEEEccceecCCCCcceEeeehhhHHHHH
Confidence 9999998 999999999998643 233555555554443
No 61
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=6.9e-34 Score=277.78 Aligned_cols=282 Identities=17% Similarity=0.161 Sum_probs=204.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCc-------cccccCcccccccccchHHHHhhCCCeEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL-------PSVTCGTVEARSIVEPVRNIVRKKNVDICFW 130 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 130 (485)
.++|+|||||+||+++|.+|++.|++|+|||+. ..++.... +.+. ......++...+.+.+.+.++++ .
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~ 80 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTEVENWPGDP-NDLTGPLLMERMHEHATKFETEI--I 80 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSBCCCSTTCC-SSCBHHHHHHHHHHHHHHTTCEE--E
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchhhhhCCCCC-CCCCHHHHHHHHHHHHHHCCCEE--E
Confidence 579999999999999999999999999999965 34432111 1111 11222355566777788888774 4
Q ss_pred EeEEEEEecCCCEEEE-ecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCCcc-ccccChhHHHHHHHHHHHHHh
Q 011476 131 EAECFKIDAENKKVYC-RSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIESFE 208 (485)
Q Consensus 131 ~~~v~~id~~~~~v~~-~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~~-~~~~~~~~~~~~~~~~~~~~~ 208 (485)
..++..++...+.+.+ .++. .+.||+||+|||+.|+.|++||.+... ..+..... ....
T Consensus 81 ~~~v~~i~~~~~~~~v~~~~~----------~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~---~~~~------ 141 (320)
T 1trb_A 81 FDHINKVDLQNRPFRLNGDNG----------EYTCDALIIATGASARYLGLPSEEAFKGRGVSACAT---SDGF------ 141 (320)
T ss_dssp CCCEEEEECSSSSEEEEESSC----------EEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHH---HHGG------
T ss_pred EeeeeEEEecCCEEEEEeCCC----------EEEcCEEEECCCCCcCCCCCCChHHhCCceeEeccc---CCcc------
Confidence 5568999887665553 3332 799999999999999988888864210 00111100 0000
Q ss_pred hcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHH
Q 011476 209 KASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKF 288 (485)
Q Consensus 209 ~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l 288 (485)
...+++++|||+|++|+|+|..|.++ +.+|+++++.+.+.. ++.+.+.+.+.+
T Consensus 142 -----------~~~~~~v~ViG~G~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~~~--~~~~~~~l~~~l 194 (320)
T 1trb_A 142 -----------FYRNQKVAVIGGGNTAVEEALYLSNI--------------ASEVHLIHRRDGFRA--EKILIKRLMDKV 194 (320)
T ss_dssp -----------GGTTSEEEEECSSHHHHHHHHHHTTT--------------SSEEEEECSSSSCCC--CHHHHHHHHHHH
T ss_pred -----------ccCCCeEEEECCCHHHHHHHHHHHhc--------------CCeEEEEEeCCcccc--CHHHHHHHHHhc
Confidence 02457999999999999999999886 689999999887643 567777888889
Q ss_pred HhCCcEEEcCceEEEEeCC--c---EEEEEcCC-CeEEEEecCeEEEccCCCCCcchHHHHH-HhCCCCCCceeeCCCc-
Q 011476 289 SRDGIDVKLGSMVVKVTDK--E---IFTKVRGN-GETSSMPYGMVVWSTGIAPHAIIKDFMK-QVGQTNRRALATDEWL- 360 (485)
Q Consensus 289 ~~~gV~v~~~~~v~~v~~~--~---v~~~~~~~-G~~~~i~~D~vi~a~G~~~~p~~~~l~~-~~g~~~~g~i~vd~~l- 360 (485)
++.||+++++++|+++..+ + +.+....+ |+..+++||.||+|+| ..|++ .+++ .+.++ +|+|.||+++
T Consensus 195 ~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G--~~p~~-~~~~~~l~~~-~G~i~vd~~~~ 270 (320)
T 1trb_A 195 ENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIG--HSPNT-AIFEGQLELE-NGYIKVQSGIH 270 (320)
T ss_dssp HTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSC--EEESC-GGGTTTSCEE-TTEECCCCSSS
T ss_pred ccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeC--CCCCh-HHhccccccc-CceEEECCCcc
Confidence 9999999999999999754 3 33332112 5445699999999999 67887 4544 22236 8999999987
Q ss_pred ----cccCCCCeEEeccccCCCCcchHHHHHHHHhhcc
Q 011476 361 ----RVEGSDSIYALGDCATVNQRRVMEDIAAIFSKAD 394 (485)
Q Consensus 361 ----~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~a~ 394 (485)
+| +.|+|||+|||+..+......++.++..+|.
T Consensus 271 ~~~~~t-~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~ 307 (320)
T 1trb_A 271 GNATQT-SIPGVFAAGDVMDHIYRQAITSAGTGCMAAL 307 (320)
T ss_dssp SCTTBC-SSTTEEECGGGGCSSSCCHHHHHHHHHHHHH
T ss_pred cccccC-CCCCEEEcccccCCcchhhhhhhccHHHHHH
Confidence 66 8999999999999766667777777766554
No 62
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=4.7e-34 Score=277.12 Aligned_cols=278 Identities=13% Similarity=0.120 Sum_probs=190.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccC-CCccccccC-cccccccccchHHHHhhCCCeEEEEEeEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT-PLLPSVTCG-TVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~gv~v~~~~~~v 134 (485)
..+||+||||||||++||.+|++.|++|+|||+...-+.. ...+.+... ...+.++.....+.+.+++. +.+....+
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 83 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPS-VHYYEKTV 83 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTT-EEEEECCE
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCC-EEEEeeEE
Confidence 3579999999999999999999999999999987533221 112222111 12233444445555555553 33566666
Q ss_pred EEEecCC-C--EEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCCcc-ccccChhHHHHHHHHHHHHHhhc
Q 011476 135 FKIDAEN-K--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIESFEKA 210 (485)
Q Consensus 135 ~~id~~~-~--~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 210 (485)
..++... . ++.+.++. .+.||+||||||++|+.|++||.++.. ..+..... . +.
T Consensus 84 ~~~~~~~~~~~~v~~~~g~----------~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~---~-----~~---- 141 (304)
T 4fk1_A 84 VMITKQSTGLFEIVTKDHT----------KYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPY---C-----DG---- 141 (304)
T ss_dssp EEEEECTTSCEEEEETTCC----------EEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHH---H-----HS----
T ss_pred EEeeecCCCcEEEEECCCC----------EEEeCEEEEccCCccccccccCccccccceeeeccc---c-----ch----
Confidence 6665432 2 44444443 899999999999999999999975210 01111100 0 00
Q ss_pred CCCCCCHHHHhhcccEEEECCChh-HHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHH
Q 011476 211 SLPNLSDEERKRILHFVIVGGGPT-GVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFS 289 (485)
Q Consensus 211 ~~~~~~~~~~~~~~~vvVVGgG~~-g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~ 289 (485)
...++++++|||||.. ++|+|..+.++ +.+|+++.+++.+. ..+.+.++
T Consensus 142 --------~~~~~~~~~VIggG~~~~~e~a~~~~~~--------------~~~v~i~~~~~~~~--------~~~~~~l~ 191 (304)
T 4fk1_A 142 --------WELKDQPLIIISENEDHTLHMTKLVYNW--------------STDLVIATNGNELS--------QTIMDELS 191 (304)
T ss_dssp --------GGGTTSCEEEECCSHHHHHHHHHHHTTT--------------CSCEEEECSSCCCC--------HHHHHHHH
T ss_pred --------hHhcCCceeeecCCCchhhhHHHHHHhC--------------CceEEEEeccccch--------hhhhhhhh
Confidence 0124568888888865 56777777665 68999998876542 34557788
Q ss_pred hCCcEEEcCceEEEEeCC--cEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC--CCCCceeeCCCccccCC
Q 011476 290 RDGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVEGS 365 (485)
Q Consensus 290 ~~gV~v~~~~~v~~v~~~--~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~--~~~g~i~vd~~l~t~~~ 365 (485)
+.|++++.++ +..+..+ .+..+.+.+|++ +++|.+++++| ..|+. .+++++|+ +++|+|.||+++|| |.
T Consensus 192 ~~g~~~~~~~-v~~~~~~~~~~~~v~~~~g~~--i~~~~~vi~~g--~~~~~-~~~~~~g~~~~~~G~I~vd~~~~T-s~ 264 (304)
T 4fk1_A 192 NKNIPVITES-IRTLQGEGGYLKKVEFHSGLR--IERAGGFIVPT--FFRPN-QFIEQLGCELQSNGTFVIDDFGRT-SE 264 (304)
T ss_dssp TTTCCEECSC-EEEEESGGGCCCEEEETTSCE--ECCCEEEECCE--EECSS-CHHHHTTCCCCTTSSSCSSTTCBC-SS
T ss_pred ccceeEeeee-EEEeecCCCeeeeeeccccce--eeecceeeeec--cccCC-hhhhhcCeEECCCCCEEECcCCcc-CC
Confidence 9999999875 6666543 344444567876 88988888877 34544 46788887 67889999999998 99
Q ss_pred CCeEEeccccCCCCcchHHHHHHHHhhcc
Q 011476 366 DSIYALGDCATVNQRRVMEDIAAIFSKAD 394 (485)
Q Consensus 366 ~~Vya~GD~~~~~~~~~~~~~~~~~~~a~ 394 (485)
|||||+|||+..+..++..++.++..+|.
T Consensus 265 p~IyA~GDv~~~~~~~~~~A~~~G~~AA~ 293 (304)
T 4fk1_A 265 KNIYLAGETTTQGPSSLIIAASQGNKAAI 293 (304)
T ss_dssp TTEEECSHHHHTSCCCHHHHHHHHHHHHH
T ss_pred CCEEEEeccCCCcchHHHHHHHHHHHHHH
Confidence 99999999998777778888888776664
No 63
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=6.4e-34 Score=293.54 Aligned_cols=283 Identities=18% Similarity=0.258 Sum_probs=197.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccc--------------------c-ccCc-------ccc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPS--------------------V-TCGT-------VEA 109 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~--------------------~-~~~~-------~~~ 109 (485)
.+||+||||||||+++|..|++.|++|+|||+++.+++++.... . ..+. .+.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 47999999999999999999999999999999877765421110 0 0000 000
Q ss_pred cccc-----------cchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEE------eecCEEEEccC
Q 011476 110 RSIV-----------EPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFC------MDYDYLVIAMG 172 (485)
Q Consensus 110 ~~~~-----------~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~------~~yd~lviAtG 172 (485)
..+. ..+.+.+++.++++ +......++ .+.+.+.... +. ... +.||+||+|||
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~~~--~~~v~V~~~~-----G~-~~~~~~~~~i~~d~lViAtG 154 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLFKKNKVTY--YKGNGSFED--ETKIRVTPVD-----GL-EGTVKEDHILDVKNIIVATG 154 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESEEEESS--SSEEEEECCT-----TC-TTCCSSCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEEEcc--CCeEEEEecC-----CC-cccccccceEEeCEEEECcC
Confidence 0111 11334566778774 444444443 3455554211 10 014 99999999999
Q ss_pred CCCCCCCCCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHh
Q 011476 173 ARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFK 252 (485)
Q Consensus 173 ~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~ 252 (485)
++|+ .+||.+.....+.+..++.. +.. .+++++|||||++|+|+|..|.++
T Consensus 155 s~p~--~~~g~~~~~~~v~~~~~~~~-------------~~~-------~~~~vvViGgG~~g~e~A~~l~~~------- 205 (478)
T 1v59_A 155 SEVT--PFPGIEIDEEKIVSSTGALS-------------LKE-------IPKRLTIIGGGIIGLEMGSVYSRL------- 205 (478)
T ss_dssp EEEC--CCTTCCCCSSSEECHHHHTT-------------CSS-------CCSEEEEECCSHHHHHHHHHHHHT-------
T ss_pred CCCC--CCCCCCCCCceEEcHHHHHh-------------hhc-------cCceEEEECCCHHHHHHHHHHHHc-------
Confidence 9884 45665311122333332211 111 235999999999999999999987
Q ss_pred hCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeC---Cc-EEEEEc--CCCeEEEEecCe
Q 011476 253 LYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD---KE-IFTKVR--GNGETSSMPYGM 326 (485)
Q Consensus 253 ~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~---~~-v~~~~~--~~G~~~~i~~D~ 326 (485)
|.+||++++.+++++.+++++.+.+.+.+++.||+++++++|++++. ++ +.+... .+|...++++|.
T Consensus 206 -------g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~ 278 (478)
T 1v59_A 206 -------GSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEV 278 (478)
T ss_dssp -------TCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESE
T ss_pred -------CCEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCE
Confidence 68999999999999999999999999999999999999999999975 33 333321 234444599999
Q ss_pred EEEccCCCCCcchHH-HHHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHH
Q 011476 327 VVWSTGIAPHAIIKD-FMKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIF 390 (485)
Q Consensus 327 vi~a~G~~~~p~~~~-l~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~ 390 (485)
||+|+| ..|++.. +++.+|+ +.+|+|.||+++|| +.|+|||+|||+..+.. ...+..++.
T Consensus 279 vv~a~G--~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~~-~~~A~~~g~ 341 (478)
T 1v59_A 279 LLVAVG--RRPYIAGLGAEKIGLEVDKRGRLVIDDQFNS-KFPHIKVVGDVTFGPML-AHKAEEEGI 341 (478)
T ss_dssp EEECSC--EEECCTTSCTTTTTCCBCTTSCBCCCTTSBC-SSTTEEECGGGSSSCCC-HHHHHHHHH
T ss_pred EEECCC--CCcCCCCCCchhcCceeCCCCCEeECcCCcc-CCCCEEEeeccCCCccc-HHHHHHHHH
Confidence 999999 7888843 4677887 55789999999997 99999999999986542 333444443
No 64
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=1.1e-33 Score=281.13 Aligned_cols=279 Identities=16% Similarity=0.234 Sum_probs=203.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCC--cccc----ccC--cccccccccchHHHHhhCCCeEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL--LPSV----TCG--TVEARSIVEPVRNIVRKKNVDICF 129 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~--~~~~----~~~--~~~~~~~~~~~~~~~~~~gv~v~~ 129 (485)
.++|+|||||+||+++|.+|++.|++|+|||+.+.+++.+. .+.. ..+ .....++...+.+.+.++++++ +
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~ 92 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDV-V 92 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEE-E
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEE-E
Confidence 57999999999999999999999999999999987765421 1110 011 1122455566777777888776 3
Q ss_pred EEeEEEEEecCCC---EEEEecCCccCCCCCceEEeecCEEEEccCC---CCCCCCCCC-CCCc----ccc-ccChhHHH
Q 011476 130 WEAECFKIDAENK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGA---RANTFNTPG-VEEN----CNF-LKEVEDAQ 197 (485)
Q Consensus 130 ~~~~v~~id~~~~---~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~---~~~~~~i~G-~~~~----~~~-~~~~~~~~ 197 (485)
.+.+|..++...+ .+.+.++. .+.||+||+|||+ .|..+++|| .+.. ++. +++..
T Consensus 93 ~~~~v~~i~~~~~~~~~v~~~~g~----------~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~~--- 159 (360)
T 3ab1_A 93 LNETVTKYTKLDDGTFETRTNTGN----------VYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVE--- 159 (360)
T ss_dssp CSCCEEEEEECTTSCEEEEETTSC----------EEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCGG---
T ss_pred cCCEEEEEEECCCceEEEEECCCc----------EEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCHH---
Confidence 5678999987654 34443332 7999999999999 567777888 5321 111 11110
Q ss_pred HHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccccccc
Q 011476 198 RIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFD 277 (485)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~ 277 (485)
...+++++|||+|++|+|+|..|.+. +.+|+++++.+.+++.
T Consensus 160 ----------------------~~~~~~vvVvG~G~~g~e~A~~l~~~--------------g~~V~lv~~~~~~~~~-- 201 (360)
T 3ab1_A 160 ----------------------DFKGKRVVIVGGGDSALDWTVGLIKN--------------AASVTLVHRGHEFQGH-- 201 (360)
T ss_dssp ----------------------GGTTCEEEEECSSHHHHHHHHHTTTT--------------SSEEEEECSSSSCSSC--
T ss_pred ----------------------HcCCCcEEEECCCHHHHHHHHHHHhc--------------CCEEEEEEcCCCCCCC--
Confidence 12457999999999999999999876 6899999999877553
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEeCC--c---EEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCCC-CC
Q 011476 278 KRITAFAEEKFSRDGIDVKLGSMVVKVTDK--E---IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQT-NR 351 (485)
Q Consensus 278 ~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~--~---v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~~-~~ 351 (485)
+...+.+.+.+++.||+++++++|++++.+ + +.+. ..+|+..++++|.||+|+| ..|++ .+++.+++. .+
T Consensus 202 ~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~-~~~g~~~~i~~D~vi~a~G--~~p~~-~~l~~~~~~~~~ 277 (360)
T 3ab1_A 202 GKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLR-SSDGSKWTVEADRLLILIG--FKSNL-GPLARWDLELYE 277 (360)
T ss_dssp SHHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEE-ETTCCEEEEECSEEEECCC--BCCSC-GGGGGSSCCEET
T ss_pred HHHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEE-ecCCCeEEEeCCEEEECCC--CCCCH-HHHHhhcccccc
Confidence 245667778888999999999999999753 2 3333 2467555699999999999 67777 577777772 37
Q ss_pred CceeeCCCccccCCCCeEEeccccCCCC--cchHHHHHHHHhhc
Q 011476 352 RALATDEWLRVEGSDSIYALGDCATVNQ--RRVMEDIAAIFSKA 393 (485)
Q Consensus 352 g~i~vd~~l~t~~~~~Vya~GD~~~~~~--~~~~~~~~~~~~~a 393 (485)
|+|.||+++|| +.|+|||+|||+..+. .....++.++..+|
T Consensus 278 g~i~vd~~~~t-~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa 320 (360)
T 3ab1_A 278 NALVVDSHMKT-SVDGLYAAGDIAYYPGKLKIIQTGLSEATMAV 320 (360)
T ss_dssp TEEECCTTSBC-SSTTEEECSTTEECTTCCCSHHHHHHHHHHHH
T ss_pred CeeeecCCCcC-CCCCEEEecCccCCCCccceeehhHHHHHHHH
Confidence 89999999998 9999999999997542 33444555544433
No 65
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.5e-33 Score=289.53 Aligned_cols=273 Identities=21% Similarity=0.287 Sum_probs=202.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCc----cc------------------c--c--cCccccc-
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PS------------------V--T--CGTVEAR- 110 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~----~~------------------~--~--~~~~~~~- 110 (485)
.+||+|||||++|+++|+.|++.|++|+|||+ +.+|+++.. |. + . ....+..
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAK 83 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHHH
Confidence 57999999999999999999999999999999 556653211 10 0 0 0001111
Q ss_pred ----------ccccchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEe-cCCccCCCCCceEEeecCEEEEccCCCCC-CC
Q 011476 111 ----------SIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCR-SSQNTNLNGKEEFCMDYDYLVIAMGARAN-TF 178 (485)
Q Consensus 111 ----------~~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~-~~~~~~~~~~~~~~~~yd~lviAtG~~~~-~~ 178 (485)
.+...+...+++.+++ ++..++..++. +.+.+. ++ ..+.||+||+|||+.|. .|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~~~~i~~--~~v~~~~~~----------~~~~~d~lviAtG~~p~~~p 149 (463)
T 4dna_A 84 LVAAKEQEIARLEGLYRKGLANAGAE--ILDTRAELAGP--NTVKLLASG----------KTVTAERIVIAVGGHPSPHD 149 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCE--EEESCEEESSS--SEEEETTTT----------EEEEEEEEEECCCEEECCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEEEeeC--CEEEEecCC----------eEEEeCEEEEecCCCcccCC
Confidence 1122234455666766 56777777754 567662 22 28999999999999999 99
Q ss_pred CCCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCC
Q 011476 179 NTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVK 258 (485)
Q Consensus 179 ~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~ 258 (485)
++||.+ .+ .+..+ .+. +. ..+++++|||+|++|+|+|..+.++
T Consensus 150 ~i~G~~-~~---~~~~~----------~~~---~~-------~~~~~v~ViGgG~~g~e~A~~l~~~------------- 192 (463)
T 4dna_A 150 ALPGHE-LC---ITSNE----------AFD---LP-------ALPESILIAGGGYIAVEFANIFHGL------------- 192 (463)
T ss_dssp TSTTGG-GC---BCHHH----------HTT---CS-------SCCSEEEEECCSHHHHHHHHHHHHT-------------
T ss_pred CCCCcc-cc---ccHHH----------Hhh---hh-------cCCCeEEEECCCHHHHHHHHHHHHc-------------
Confidence 999974 22 12111 111 11 1246999999999999999999987
Q ss_pred CCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--c-EEEEEcCCCeEEEEecCeEEEccCCCC
Q 011476 259 DSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--E-IFTKVRGNGETSSMPYGMVVWSTGIAP 335 (485)
Q Consensus 259 ~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~--~-v~~~~~~~G~~~~i~~D~vi~a~G~~~ 335 (485)
+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|++++.+ + +.+..+.+|+ +++|.||+|+| .
T Consensus 193 -g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~---i~aD~Vv~a~G--~ 266 (463)
T 4dna_A 193 -GVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE---IVADQVMLALG--R 266 (463)
T ss_dssp -TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE---EEESEEEECSC--E
T ss_pred -CCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe---EEeCEEEEeeC--c
Confidence 689999999999999999999999999999999999999999999753 3 3333146675 89999999999 6
Q ss_pred CcchHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHH
Q 011476 336 HAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIF 390 (485)
Q Consensus 336 ~p~~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~ 390 (485)
.|++..| ++.+|+ +.+|+|.||+++|| +.|+|||+|||+..+.. ...+..++.
T Consensus 267 ~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~~~~-~~~A~~~g~ 322 (463)
T 4dna_A 267 MPNTNGLGLEAAGVRTNELGAIIVDAFSRT-STPGIYALGDVTDRVQL-TPVAIHEAM 322 (463)
T ss_dssp EESCTTSSTGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSGGGSSCCC-HHHHHHHHH
T ss_pred ccCCCCCCccccCceECCCCCEeECcCCCC-CCCCEEEEEecCCCCCC-hHHHHHHHH
Confidence 8888544 678887 67899999999997 99999999999985442 333444443
No 66
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=5.9e-33 Score=286.22 Aligned_cols=283 Identities=17% Similarity=0.292 Sum_probs=201.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCC------cccCCC----ccc-----------------cccC----
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY------FAFTPL----LPS-----------------VTCG---- 105 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~------~~~~~~----~~~-----------------~~~~---- 105 (485)
..+||+|||||+||+++|+.|++.|++|+|||+++. +++++. .|. ...+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 358999999999999999999999999999999863 332211 010 0000
Q ss_pred --cccccc-----------cccchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccC
Q 011476 106 --TVEARS-----------IVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMG 172 (485)
Q Consensus 106 --~~~~~~-----------~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG 172 (485)
..+... +...+...+++.+++ ++.+.+..+++....+...++ +...+.||+||||||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g~~~~~~~~~~~v~~~~g--------~~~~~~~d~lvlAtG 151 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVT--LFEGHGKLLAGKKVEVTAADG--------SSQVLDTENVILASG 151 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCE--EEESEEEECSTTCEEEECTTS--------CEEEECCSCEEECCC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEEecCCEEEEEcCCC--------ceEEEEcCEEEEcCC
Confidence 000000 111123445566766 667777777665444433222 234899999999999
Q ss_pred CCCCCCCCCCCC-CccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHH
Q 011476 173 ARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLF 251 (485)
Q Consensus 173 ~~~~~~~i~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~ 251 (485)
++|..|+.++.+ ..++. .. +.+ .+. ..+++++|||+|++|+|+|..+.++
T Consensus 152 ~~p~~~~~~~~~~~~v~~---~~----------~~~---~~~-------~~~~~v~ViGgG~~g~e~A~~l~~~------ 202 (476)
T 3lad_A 152 SKPVEIPPAPVDQDVIVD---ST----------GAL---DFQ-------NVPGKLGVIGAGVIGLELGSVWARL------ 202 (476)
T ss_dssp EEECCCTTSCCCSSSEEE---HH----------HHT---SCS-------SCCSEEEEECCSHHHHHHHHHHHHT------
T ss_pred CCCCCCCCCCCCcccEEe---ch----------hhh---ccc-------cCCCeEEEECCCHHHHHHHHHHHHc------
Confidence 999877666543 22221 11 111 111 1346999999999999999999987
Q ss_pred hhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcC-CCeEEEEecCeEE
Q 011476 252 KLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRG-NGETSSMPYGMVV 328 (485)
Q Consensus 252 ~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~-~G~~~~i~~D~vi 328 (485)
|.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|++++. +.+.+.... +| ..++++|.||
T Consensus 203 --------g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g-~~~~~~D~vi 273 (476)
T 3lad_A 203 --------GAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEG-EKSQAFDKLI 273 (476)
T ss_dssp --------TCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSE-EEEEEESEEE
T ss_pred --------CCcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCC-cEEEECCEEE
Confidence 68999999999999999999999999999999999999999999974 344444322 23 3459999999
Q ss_pred EccCCCCCcchHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHh
Q 011476 329 WSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFS 391 (485)
Q Consensus 329 ~a~G~~~~p~~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~ 391 (485)
+|+| ..|++..| ++.+|+ +.+|+|.||+++|| +.|+|||+|||+..+.. ...+..++..
T Consensus 274 ~a~G--~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~~-~~~A~~~g~~ 335 (476)
T 3lad_A 274 VAVG--RRPVTTDLLAADSGVTLDERGFIYVDDYCAT-SVPGVYAIGDVVRGAML-AHKASEEGVV 335 (476)
T ss_dssp ECSC--EEECCTTCCSSCCSCCBCTTSCBCCCTTSBC-SSTTEEECGGGSSSCCC-HHHHHHHHHH
T ss_pred EeeC--CcccCCCCCccccCccccCCCCEeeCCCccc-CCCCEEEEEccCCCccc-HHHHHHHHHH
Confidence 9999 78888554 677777 56789999999998 99999999999976543 4444444443
No 67
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3e-33 Score=286.64 Aligned_cols=273 Identities=21% Similarity=0.305 Sum_probs=199.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCC----cccc---------------c----cCc------cc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPSV---------------T----CGT------VE 108 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~----~~~~---------------~----~~~------~~ 108 (485)
.+||+|||||+||++||.+|++.|++|+|||+ +.+++++. .|.. . .+. .+
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 83 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRLD 83 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCccC
Confidence 57999999999999999999999999999999 55654321 1110 0 111 11
Q ss_pred cccccc-----------chHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCC
Q 011476 109 ARSIVE-----------PVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (485)
Q Consensus 109 ~~~~~~-----------~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~ 177 (485)
...+.. .+..++++.+++ ++.+++..++. +++.+.+ . .+.||+||||||++|+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~~~~~~~--~~v~v~~-~----------~~~~d~lviATGs~p~~ 148 (458)
T 1lvl_A 84 IGQSVAWKDGIVDRLTTGVAALLKKHGVK--VVHGWAKVLDG--KQVEVDG-Q----------RIQCEHLLLATGSSSVE 148 (458)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EECSCEEEEET--TEEEETT-E----------EEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcE--EEEEEEEEccC--CEEEEee-E----------EEEeCEEEEeCCCCCCC
Confidence 111111 123566778877 45565655653 6676643 2 89999999999999987
Q ss_pred CC-CCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcC
Q 011476 178 FN-TPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPK 256 (485)
Q Consensus 178 ~~-i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~ 256 (485)
|+ +|. +.. +.+..++. .+. ..+++++|||||++|+|+|..|.++
T Consensus 149 ~~~~~~-~~~---v~~~~~~~-------------~~~-------~~~~~vvViGgG~~g~e~A~~l~~~----------- 193 (458)
T 1lvl_A 149 LPMLPL-GGP---VISSTEAL-------------APK-------ALPQHLVVVGGGYIGLELGIAYRKL----------- 193 (458)
T ss_dssp BTTBCC-BTT---EECHHHHT-------------CCS-------SCCSEEEEECCSHHHHHHHHHHHHH-----------
T ss_pred CCCCCc-cCc---EecHHHHh-------------hhh-------ccCCeEEEECcCHHHHHHHHHHHHC-----------
Confidence 75 552 222 22222211 111 1246999999999999999999987
Q ss_pred CCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCCCCC
Q 011476 257 VKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPH 336 (485)
Q Consensus 257 ~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~ 336 (485)
|.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|++++.+++.+. ..+|+..++++|.|++|+| ..
T Consensus 194 ---g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~v~v~-~~~G~~~~i~~D~vv~a~G--~~ 267 (458)
T 1lvl_A 194 ---GAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENGCLLAN-DGKGGQLRLEADRVLVAVG--RR 267 (458)
T ss_dssp ---TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEETTEEEEE-CSSSCCCEECCSCEEECCC--EE
T ss_pred ---CCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEeCCEEEE-ECCCceEEEECCEEEECcC--CC
Confidence 68999999999999999999999999999999999999999999987445444 3456433599999999999 68
Q ss_pred cchHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHH
Q 011476 337 AIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIF 390 (485)
Q Consensus 337 p~~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~ 390 (485)
|++..+ ++.+|+ +.+ +|.||+++|| +.|+|||+|||+..+.. ...+..++.
T Consensus 268 p~~~~l~~~~~g~~~~~~-~i~vd~~~~t-~~~~Iya~GD~~~~~~~-~~~A~~~g~ 321 (458)
T 1lvl_A 268 PRTKGFNLECLDLKMNGA-AIAIDERCQT-SMHNVWAIGDVAGEPML-AHRAMAQGE 321 (458)
T ss_dssp ECCSSSSGGGSCCCEETT-EECCCTTCBC-SSTTEEECGGGGCSSCC-HHHHHHHHH
T ss_pred cCCCCCCcHhcCCcccCC-EEeECCCCcC-CCCCEEEeeccCCCccc-HHHHHHHHH
Confidence 888443 677787 445 8999999997 89999999999986542 334444444
No 68
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=2.9e-33 Score=296.33 Aligned_cols=286 Identities=17% Similarity=0.214 Sum_probs=200.3
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC-C-------CcccCCC----ccccc----------------cC--
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR-N-------YFAFTPL----LPSVT----------------CG-- 105 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~-~-------~~~~~~~----~~~~~----------------~~-- 105 (485)
...+||+||||||||++||.+|++.|++|+|||+. + .++++++ .|... .+
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~ 184 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWS 184 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcc
Confidence 34689999999999999999999999999999973 2 1343211 11100 00
Q ss_pred ------cccccccccc-----------hHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEE
Q 011476 106 ------TVEARSIVEP-----------VRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLV 168 (485)
Q Consensus 106 ------~~~~~~~~~~-----------~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lv 168 (485)
..+..++..+ +...+...+++ ++.+.+..++.. .+.+.+. +++...+.||+||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~--~~~~~~~~~~~~--~v~v~~~------~g~~~~~~~d~lv 254 (598)
T 2x8g_A 185 LDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVT--YLNAKGRLISPH--EVQITDK------NQKVSTITGNKII 254 (598)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EECSEEEEEETT--EEEEECT------TCCEEEEEEEEEE
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcE--EEEEEEEEcCCC--EEEEEeC------CCCeEEEEeCEEE
Confidence 0011111111 12234556755 667777777764 4554432 1112479999999
Q ss_pred EccCCCCCCCCCCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHH
Q 011476 169 IAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDE 248 (485)
Q Consensus 169 iAtG~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~ 248 (485)
||||++|+.|++||.++.+. +..+ .+ .++ ..+++++|||||++|+|+|..|.++
T Consensus 255 iAtGs~p~~p~i~G~~~~~~---~~~~----------~~---~~~-------~~~~~vvViGgG~~g~E~A~~l~~~--- 308 (598)
T 2x8g_A 255 LATGERPKYPEIPGAVEYGI---TSDD----------LF---SLP-------YFPGKTLVIGASYVALECAGFLASL--- 308 (598)
T ss_dssp ECCCEEECCCSSTTHHHHCE---EHHH----------HT---TCS-------SCCCSEEEECCSHHHHHHHHHHHHT---
T ss_pred EeCCCCCCCCCCCCcccceE---cHHH----------Hh---hCc-------cCCCEEEEECCCHHHHHHHHHHHHc---
Confidence 99999999999999643222 1111 11 112 1335899999999999999999997
Q ss_pred HHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEe--------C---CcEEEE-EcCC
Q 011476 249 DLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVT--------D---KEIFTK-VRGN 316 (485)
Q Consensus 249 ~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~--------~---~~v~~~-~~~~ 316 (485)
|.+||++++. .+++.+++++.+.+.+.+++.||++++++.+.++. . +.+.+. ...+
T Consensus 309 -----------g~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~ 376 (598)
T 2x8g_A 309 -----------GGDVTVMVRS-ILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTD 376 (598)
T ss_dssp -----------TCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETT
T ss_pred -----------CCEEEEEECC-cCcCcCCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCC
Confidence 6899999998 77888999999999999999999999999887773 2 234332 2246
Q ss_pred CeEEEEecCeEEEccCCCCCcchHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHhh
Q 011476 317 GETSSMPYGMVVWSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSK 392 (485)
Q Consensus 317 G~~~~i~~D~vi~a~G~~~~p~~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~ 392 (485)
|++.++++|.|++|+| ..|++..| ++.+|+ +.+|+|.||+++|| +.|+|||+|||+.........++.++..+
T Consensus 377 g~~~~~~~D~vi~a~G--~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-s~~~VyA~GD~~~~~~~~~~~A~~~g~~a 452 (598)
T 2x8g_A 377 GKKFEEEFETVIFAVG--REPQLSKVLCETVGVKLDKNGRVVCTDDEQT-TVSNVYAIGDINAGKPQLTPVAIQAGRYL 452 (598)
T ss_dssp SCEEEEEESEEEECSC--EEECGGGTBCGGGCCCBCTTSCBCCCTTSBC-SSTTEEECGGGBTTSCCCHHHHHHHHHHH
T ss_pred CcEEeccCCEEEEEeC--CccccCccCchhcCceECCCCcEEeCCCCcC-CCCCEEEEeeecCCCCccHHHHHHhHHHH
Confidence 7765567999999999 68988444 577777 56789999999997 99999999999654333344555555433
No 69
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=1.2e-33 Score=289.71 Aligned_cols=265 Identities=23% Similarity=0.354 Sum_probs=197.7
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCc----ccc---------------ccCc------ccccccc
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PSV---------------TCGT------VEARSIV 113 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~----~~~---------------~~~~------~~~~~~~ 113 (485)
+||+||||||||+++|.+|++.|++|+|||+++.+++++.. |.. ..+. .+...+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 81 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPALM 81 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHHH
Confidence 68999999999999999999999999999999877664211 110 0000 1111111
Q ss_pred -----------cchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCC
Q 011476 114 -----------EPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPG 182 (485)
Q Consensus 114 -----------~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G 182 (485)
..+...+++.+++ ++.+++..+++ +.+.+.. . + ..+.||+||+|||++|+.|+++|
T Consensus 82 ~~~~~~~~~l~~~~~~~~~~~~v~--~~~g~~~~i~~--~~~~v~~-~-----g---~~~~~d~lviAtG~~p~~~~~~g 148 (455)
T 2yqu_A 82 AHKDKVVQANTQGVEFLFKKNGIA--RHQGTARFLSE--RKVLVEE-T-----G---EELEARYILIATGSAPLIPPWAQ 148 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCE--EEESCEEESSS--SEEEETT-T-----C---CEEEEEEEEECCCEEECCCTTBC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEEecC--CeEEEee-C-----C---EEEEecEEEECCCCCCCCCCCCC
Confidence 1124556667876 45555555543 5566542 1 1 18999999999999999999988
Q ss_pred CCC-ccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCc
Q 011476 183 VEE-NCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV 261 (485)
Q Consensus 183 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~ 261 (485)
.+. .++ +..++ + .+. ..+++++|||||++|+|+|..|.++ |.
T Consensus 149 ~~~~~v~---~~~~~----------~---~~~-------~~~~~vvIiGgG~~g~e~A~~l~~~--------------g~ 191 (455)
T 2yqu_A 149 VDYERVV---TSTEA----------L---SFP-------EVPKRLIVVGGGVIGLELGVVWHRL--------------GA 191 (455)
T ss_dssp CCSSSEE---CHHHH----------T---CCS-------SCCSEEEEECCSHHHHHHHHHHHHT--------------TC
T ss_pred CCcCcEe---chHHh----------h---ccc-------cCCCeEEEECCCHHHHHHHHHHHHc--------------CC
Confidence 653 222 22221 1 111 1236999999999999999999986 68
Q ss_pred eEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCCCCCcch
Q 011476 262 KITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAII 339 (485)
Q Consensus 262 ~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~ 339 (485)
+|+++++.+++++.+++++.+.+.+.+++.||+++++++|++++. +.+.+.. .+|+. +++|.||+|+| ..|++
T Consensus 192 ~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~-~~g~~--i~~D~vv~A~G--~~p~~ 266 (455)
T 2yqu_A 192 EVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVEL-EGGEV--LEADRVLVAVG--RRPYT 266 (455)
T ss_dssp EEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEE-TTSCE--EEESEEEECSC--EEECC
T ss_pred EEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEE-CCCeE--EEcCEEEECcC--CCcCC
Confidence 999999999999999999999999999999999999999999974 3355543 45665 99999999999 68887
Q ss_pred HHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCC
Q 011476 340 KDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQ 379 (485)
Q Consensus 340 ~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~ 379 (485)
..+ ++.+|+ +.+|+|.||++++| +.|+|||+|||+..+.
T Consensus 267 ~~l~~~~~g~~~~~~g~i~vd~~~~t-~~~~iya~GD~~~~~~ 308 (455)
T 2yqu_A 267 EGLSLENAGLSTDERGRIPVDEHLRT-RVPHIYAIGDVVRGPM 308 (455)
T ss_dssp TTCCGGGGTCCCCTTSCCCCCTTSBC-SSTTEEECGGGSSSCC
T ss_pred CCCChhhcCCccCCCCcEeECCCccc-CCCCEEEEecCCCCcc
Confidence 433 677777 45688999999997 8999999999998654
No 70
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=9.7e-34 Score=288.66 Aligned_cols=289 Identities=16% Similarity=0.130 Sum_probs=199.2
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEE
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~ 135 (485)
.+.++|+||||||||+++|.+|++.|++|+|||+.+.+++... ..+ +....++++.....+++++.|++++ .+..+
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~-~gi-p~~~~~~~~~~~~~~~l~~~gv~~~-~~~~v- 195 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV-YGI-PGFKLEKSVVERRVKLLADAGVIYH-PNFEV- 195 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH-HTS-CTTTSCHHHHHHHHHHHHHTTCEEE-TTCCB-
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee-ecC-CCccCCHHHHHHHHHHHHHCCcEEE-eCCEe-
Confidence 4678999999999999999999999999999999988876421 111 1111233566667788888997753 22222
Q ss_pred EEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCC-CCCCCCCCCC-CccccccChhHHHHHHHHHHH-HHhhcCC
Q 011476 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGAR-ANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIE-SFEKASL 212 (485)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~-~~~~~i~G~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 212 (485)
. +.+.+.+. .+.||+||||||+. |+.+++||.+ .+++. +..+...... .+.. ..
T Consensus 196 --~---~~v~~~~~-----------~~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~------a~~~l~~~~~~~~~~-~~ 252 (456)
T 2vdc_G 196 --G---RDASLPEL-----------RRKHVAVLVATGVYKARDIKAPGSGLGNIVA------ALDYLTTSNKVSLGD-TV 252 (456)
T ss_dssp --T---TTBCHHHH-----------HSSCSEEEECCCCCEECCTTCSCCTTTTEEE------HHHHHHHHHHHHCTT-TC
T ss_pred --c---cEEEhhHh-----------HhhCCEEEEecCCCCCCCCCCCCCcCCCcEE------HHHHHHHhhhhhccc-cc
Confidence 1 12222211 46799999999996 7888999975 33332 1222111111 1111 00
Q ss_pred CCCCH-HHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCc-eEEEEecCccc-cccccHHHHHHHHHHHH
Q 011476 213 PNLSD-EERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV-KITLLEAADHI-LNMFDKRITAFAEEKFS 289 (485)
Q Consensus 213 ~~~~~-~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~-~Vtlv~~~~~~-l~~~~~~~~~~~~~~l~ 289 (485)
+...+ .....+++|+|||||++|+|+|..+.++ |. +|++++|++.. ++..+.+ .+.++
T Consensus 253 ~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~--------------Ga~~Vtiv~r~~~~~~p~~~~e-----~~~~~ 313 (456)
T 2vdc_G 253 EAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQ--------------GATSVKCLYRRDRKNMPGSQRE-----VAHAE 313 (456)
T ss_dssp SSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHT--------------TCSEEEEECSSCSTTCSSCHHH-----HHHHH
T ss_pred ccccccccccCCCEEEEECCChhHHHHHHHHHHc--------------CCCEEEEEEeCCccCCCCCHHH-----HHHHH
Confidence 00000 0013578999999999999999999987 44 69999999876 6665543 25678
Q ss_pred hCCcEEEcCceEEEEeCCc----EEEEEc------C---------CCeEEEEecCeEEEccCCCCCcchHH-HHHHhCC-
Q 011476 290 RDGIDVKLGSMVVKVTDKE----IFTKVR------G---------NGETSSMPYGMVVWSTGIAPHAIIKD-FMKQVGQ- 348 (485)
Q Consensus 290 ~~gV~v~~~~~v~~v~~~~----v~~~~~------~---------~G~~~~i~~D~vi~a~G~~~~p~~~~-l~~~~g~- 348 (485)
+.||++++++.++++.+++ +.+... . +|+..++++|.||+|+| +.|+... +++.+++
T Consensus 314 ~~Gv~~~~~~~~~~i~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G--~~p~~~~~~l~~~gl~ 391 (456)
T 2vdc_G 314 EEGVEFIWQAAPEGFTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALG--FEPEDLPNAFDEPELK 391 (456)
T ss_dssp HTTCEEECCSSSCCEEEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSC--EECCCHHHHHHSTTSC
T ss_pred HCCCEEEeCCCceEEeCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCC--CCCCcchhhcccCCee
Confidence 8899999999998886532 222210 1 35556799999999999 5777644 6777777
Q ss_pred -CCCCceeeCCC-ccccCCCCeEEeccccCCCCcchHHHHHHHHhhcc
Q 011476 349 -TNRRALATDEW-LRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKAD 394 (485)
Q Consensus 349 -~~~g~i~vd~~-l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~a~ 394 (485)
+.+|+|.||++ ++| +.|+|||+|||+..+. .+..++.++..+|.
T Consensus 392 ~~~~G~i~vd~~~~~T-s~~~VfA~GD~~~g~~-~v~~A~~~G~~aA~ 437 (456)
T 2vdc_G 392 VTRWGTLLVDHRTKMT-NMDGVFAAGDIVRGAS-LVVWAIRDGRDAAE 437 (456)
T ss_dssp BCTTSSBCCCTTTCBC-SSTTEEECGGGGSSCC-SHHHHHHHHHHHHH
T ss_pred ECCCCCEEECCCCCcC-CCCCEEEeccccCCch-HHHHHHHHHHHHHH
Confidence 67899999997 997 9999999999998754 47778888776654
No 71
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=2e-33 Score=290.27 Aligned_cols=276 Identities=17% Similarity=0.239 Sum_probs=199.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCc----c------------------cc--ccC--cccccc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----P------------------SV--TCG--TVEARS 111 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~----~------------------~~--~~~--~~~~~~ 111 (485)
.+||+||||||||++||..|++.|++|+|||+++ +|++++. | .+ ..+ ..+..+
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 86 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNGKA 86 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCHHH
Confidence 4799999999999999999999999999999875 6654311 1 00 000 011111
Q ss_pred cccchHH-----------HHhhC-CCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCC
Q 011476 112 IVEPVRN-----------IVRKK-NVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (485)
Q Consensus 112 ~~~~~~~-----------~~~~~-gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~ 179 (485)
+..++.. .+... +++ ++.+.+..++. +++.+.++. .+.||+||||||++|+.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~g~a~~~~~--~~v~~~~~~----------~~~~d~lViATGs~p~~p~ 152 (492)
T 3ic9_A 87 VMKRIQTERDRFVGFVVESVESFDEQD--KIRGFAKFLDE--HTLQVDDHS----------QVIAKRIVIATGSRPNYPE 152 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCGGG--EEESCEEEEET--TEEEETTTE----------EEEEEEEEECCCEECCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCee--EEEEEEEEecC--CEEEEcCCc----------EEEeCEEEEccCCCCcCCC
Confidence 2222111 12222 333 45666666654 567765433 8999999999999999888
Q ss_pred CCCCC-CccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCC
Q 011476 180 TPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVK 258 (485)
Q Consensus 180 i~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~ 258 (485)
++|.. +.++ +.. +.+. +. ..+++++|||||++|+|+|..|.++
T Consensus 153 ~~~~~~~~v~---t~~----------~~~~---~~-------~~~k~vvViGgG~ig~E~A~~l~~~------------- 196 (492)
T 3ic9_A 153 FLAAAGSRLL---TND----------NLFE---LN-------DLPKSVAVFGPGVIGLELGQALSRL------------- 196 (492)
T ss_dssp HHHTTGGGEE---CHH----------HHTT---CS-------SCCSEEEEESSCHHHHHHHHHHHHT-------------
T ss_pred CCCccCCcEE---cHH----------HHhh---hh-------hcCCeEEEECCCHHHHHHHHHHHHc-------------
Confidence 66543 2222 111 1111 12 1246999999999999999999997
Q ss_pred CCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEc-CCCeEEEEecCeEEEccCCCC
Q 011476 259 DSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVR-GNGETSSMPYGMVVWSTGIAP 335 (485)
Q Consensus 259 ~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~-~~G~~~~i~~D~vi~a~G~~~ 335 (485)
|.+|+++++.+++++.+++++.+.+.+.|++. |++++++.|++++. +.+.+... .+|+..++++|.|++|+| .
T Consensus 197 -g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G--~ 272 (492)
T 3ic9_A 197 -GVIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATG--R 272 (492)
T ss_dssp -TCEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSC--C
T ss_pred -CCeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeC--C
Confidence 68999999999999999999999999999998 99999999999964 34555432 367545699999999999 7
Q ss_pred CcchHHH-HHHhCC--CCCCceeeC-CCccccCCCCeEEeccccCCCCcchHHHHHHHH
Q 011476 336 HAIIKDF-MKQVGQ--TNRRALATD-EWLRVEGSDSIYALGDCATVNQRRVMEDIAAIF 390 (485)
Q Consensus 336 ~p~~~~l-~~~~g~--~~~g~i~vd-~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~ 390 (485)
.|++..| ++.+|+ +.+|+|.|| +++|| +.|+|||+|||+..+.. ...+..++.
T Consensus 273 ~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t-~~~~IyA~GD~~~~~~~-~~~A~~~g~ 329 (492)
T 3ic9_A 273 KANVDKLGLENTSIELDKKNSPLFDELTLQT-SVDHIFVAGDANNTLTL-LHEAADDGK 329 (492)
T ss_dssp EESCSSSCGGGSCCCBCTTCCBCCCTTTCBC-SSTTEEECGGGGTSSCS-HHHHHHHHH
T ss_pred ccCCCCCChhhcCCEECCCCCEeECcccccC-CCCCEEEEEecCCCCcc-HHHHHHHHH
Confidence 8888443 678887 678999999 89998 99999999999986543 334444443
No 72
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=3.2e-33 Score=274.69 Aligned_cols=287 Identities=15% Similarity=0.164 Sum_probs=199.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcC----CCCcccCCCcc----ccc--cCcccccccccchHHHHhhCCCeE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISP----RNYFAFTPLLP----SVT--CGTVEARSIVEPVRNIVRKKNVDI 127 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~----~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~gv~v 127 (485)
.++|+|||||++|+++|+.|++.|++|+|||+ ....++..... .++ .......++...+.+.+.+.++++
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~ 87 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTI 87 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEE
Confidence 47999999999999999999999999999998 33344321111 000 011222355566777788888775
Q ss_pred EEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCCc--cccccChhHHHHHHHHHHH
Q 011476 128 CFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEEN--CNFLKEVEDAQRIRRNVIE 205 (485)
Q Consensus 128 ~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~--~~~~~~~~~~~~~~~~~~~ 205 (485)
...++..++...+.+.+... + ..+.||+||+|||++|..|++||.+.. .+....+.........
T Consensus 88 --~~~~v~~i~~~~~~~~v~~~------~---~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--- 153 (333)
T 1vdc_A 88 --FTETVTKVDFSSKPFKLFTD------S---KAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGA--- 153 (333)
T ss_dssp --ECCCCCEEECSSSSEEEECS------S---EEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHTT---
T ss_pred --EEeEEEEEEEcCCEEEEEEC------C---cEEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEeccCccc---
Confidence 34558889887664444321 1 279999999999999999999997541 1211111111111000
Q ss_pred HHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHH
Q 011476 206 SFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAE 285 (485)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~ 285 (485)
+ ....+++|+|||+|++|+|+|..|.++ +.+|+++++.+.+.. .+. ...
T Consensus 154 ------~------~~~~~~~v~VvG~G~~g~e~A~~l~~~--------------g~~V~lv~~~~~~~~--~~~---~~~ 202 (333)
T 1vdc_A 154 ------A------PIFRNKPLAVIGGGDSAMEEANFLTKY--------------GSKVYIIHRRDAFRA--SKI---MQQ 202 (333)
T ss_dssp ------S------GGGTTSEEEEECCSHHHHHHHHHHTTT--------------SSEEEEECSSSSCCS--CHH---HHH
T ss_pred ------h------hhcCCCeEEEECCChHHHHHHHHHHhc--------------CCeEEEEecCCcCCc--cHH---HHH
Confidence 0 002457999999999999999999876 689999999887643 111 123
Q ss_pred HHHHhCCcEEEcCceEEEEeCC----c---EEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC--CCCCceee
Q 011476 286 EKFSRDGIDVKLGSMVVKVTDK----E---IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALAT 356 (485)
Q Consensus 286 ~~l~~~gV~v~~~~~v~~v~~~----~---v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~--~~~g~i~v 356 (485)
+.+++.||+++++++++++..+ . +.+....+|+..+++||.||+|+| ..|++ .+++ .++ +.+|+|.|
T Consensus 203 ~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G--~~p~~-~~~~-~~l~~~~~G~i~v 278 (333)
T 1vdc_A 203 RALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIG--HEPAT-KFLD-GGVELDSDGYVVT 278 (333)
T ss_dssp HHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSC--EEESC-GGGT-TSSCBCTTSCBCC
T ss_pred HHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeC--Cccch-HHhh-ccccccCCCCEEe
Confidence 4567889999999999999753 2 444433356555699999999999 68887 5554 344 56799999
Q ss_pred CCC-ccccCCCCeEEeccccCCCCcchHHHHHHHHhhcc
Q 011476 357 DEW-LRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKAD 394 (485)
Q Consensus 357 d~~-l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~a~ 394 (485)
|++ ++| +.|+|||+|||+..+......++.++..+|.
T Consensus 279 d~~~~~t-~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~ 316 (333)
T 1vdc_A 279 KPGTTQT-SVPGVFAAGDVQDKKYRQAITAAGTGCMAAL 316 (333)
T ss_dssp CTTSCBC-SSTTEEECGGGGCSSCCCHHHHHHHHHHHHH
T ss_pred chhhccc-CCCCEEEeeeccCCCchhHHHHHHhHHHHHH
Confidence 997 576 9999999999998765566777777665553
No 73
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.8e-33 Score=274.47 Aligned_cols=282 Identities=17% Similarity=0.202 Sum_probs=197.9
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCc-------cccccCcccccccccchHHHHhhCCCeEE
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL-------PSVTCGTVEARSIVEPVRNIVRKKNVDIC 128 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 128 (485)
...++|+|||||+||+++|..|++.|++|+|||+. .+++.... +.+. ......++...+.+.+.+.++++
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~v~~- 88 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTDVENYPGFR-NGITGPELMDEMREQALRFGADL- 88 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSCBCCSTTCT-TCBCHHHHHHHHHHHHHHTTCEE-
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccchhhhcCCCC-CCCCHHHHHHHHHHHHHHcCCEE-
Confidence 34689999999999999999999999999999975 34432111 1111 11223355666777788888775
Q ss_pred EEEeEEEEEecCC-CEE-EEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCCcc-ccccChhHHHHHHHHHHH
Q 011476 129 FWEAECFKIDAEN-KKV-YCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIE 205 (485)
Q Consensus 129 ~~~~~v~~id~~~-~~v-~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~~-~~~~~~~~~~~~~~~~~~ 205 (485)
...++..++... ..+ .+.++. .+.||+||+|||+.|+.|++||.+... ..+..... ....
T Consensus 89 -~~~~v~~i~~~~~~~v~~~~~g~----------~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~---~~~~--- 151 (335)
T 2a87_A 89 -RMEDVESVSLHGPLKSVVTADGQ----------THRARAVILAMGAAARYLQVPGEQELLGRGVSSCAT---CDGF--- 151 (335)
T ss_dssp -ECCCEEEEECSSSSEEEEETTSC----------EEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHH---HHGG---
T ss_pred -EEeeEEEEEeCCcEEEEEeCCCC----------EEEeCEEEECCCCCccCCCCCchHhccCCceEEeec---cchh---
Confidence 445588888722 245 444333 799999999999999999999864210 01111110 0000
Q ss_pred HHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHH
Q 011476 206 SFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAE 285 (485)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~ 285 (485)
...+++++|||+|++|+|+|..|.++ +.+|+++++.+.+... ..+ ..
T Consensus 152 --------------~~~~~~v~ViG~G~~g~e~a~~l~~~--------------g~~V~l~~~~~~~~~~--~~~---~~ 198 (335)
T 2a87_A 152 --------------FFRDQDIAVIGGGDSAMEEATFLTRF--------------ARSVTLVHRRDEFRAS--KIM---LD 198 (335)
T ss_dssp --------------GGTTCEEEEECSSHHHHHHHHHHTTT--------------CSEEEEECSSSSCSSC--TTH---HH
T ss_pred --------------hcCCCEEEEECCCHHHHHHHHHHHHh--------------CCeEEEEEcCCcCCcc--HHH---HH
Confidence 02457999999999999999999876 6899999998876432 111 12
Q ss_pred HHHHhCCcEEEcCceEEEEeCCc----EEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHH-HhCCCCCCceeeCCC-
Q 011476 286 EKFSRDGIDVKLGSMVVKVTDKE----IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMK-QVGQTNRRALATDEW- 359 (485)
Q Consensus 286 ~~l~~~gV~v~~~~~v~~v~~~~----v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~-~~g~~~~g~i~vd~~- 359 (485)
+.+++.||++++++++++++.++ +.+....+|+..+++||.||+|+| ..|++ .+++ .+.++.+|+|.||++
T Consensus 199 ~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G--~~p~~-~~~~~~l~~~~~G~i~vd~~~ 275 (335)
T 2a87_A 199 RARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIG--HEPRS-GLVREAIDVDPDGYVLVQGRT 275 (335)
T ss_dssp HHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSC--EEECC-TTTBTTBCBCTTSCBCCSTTS
T ss_pred HHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccC--CccCh-hHhhcccccCCCccEEeCCCC
Confidence 44567899999999999998654 555543356545699999999999 68887 4544 222366899999996
Q ss_pred ccccCCCCeEEeccccCCCCcchHHHHHHHHhhcc
Q 011476 360 LRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKAD 394 (485)
Q Consensus 360 l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~a~ 394 (485)
++| +.|+|||+|||+..+......++.++..+|.
T Consensus 276 ~~t-~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~ 309 (335)
T 2a87_A 276 TST-SLPGVFAAGDLVDRTYRQAVTAAGSGCAAAI 309 (335)
T ss_dssp SBC-SSTTEEECGGGTCCSCCCHHHHHHHHHHHHH
T ss_pred Ccc-CCCCEEEeeecCCccHHHHHHHHHhHHHHHH
Confidence 566 9999999999998765556677777665543
No 74
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=1.6e-32 Score=285.20 Aligned_cols=278 Identities=18% Similarity=0.283 Sum_probs=204.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCC----cccccc-CcccccccccchHHHHhhCCCeEEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPSVTC-GTVEARSIVEPVRNIVRKKNVDICFWE 131 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~gv~v~~~~ 131 (485)
..++|+||||||||+++|.+|++.|++|+|||+. +++... .+.+.. ......++...+.+.++++|+++ +..
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~--~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v-~~~ 287 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER--FGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDV-IDS 287 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS--TTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEE-ECS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECC--CCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEE-EcC
Confidence 4679999999999999999999999999999864 444322 111111 11222345566777788888775 234
Q ss_pred eEEEEEecC-----CCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCCc----cccccChhHHHHHHHH
Q 011476 132 AECFKIDAE-----NKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEEN----CNFLKEVEDAQRIRRN 202 (485)
Q Consensus 132 ~~v~~id~~-----~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~----~~~~~~~~~~~~~~~~ 202 (485)
++|..++++ ...+.+.++. .+.||+||+|||++|+.+++||.++. ++.+..
T Consensus 288 ~~v~~i~~~~~~~~~~~V~~~~g~----------~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~---------- 347 (521)
T 1hyu_A 288 QSASKLVPAATEGGLHQIETASGA----------VLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPH---------- 347 (521)
T ss_dssp CCEEEEECCSSTTSCEEEEETTSC----------EEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTT----------
T ss_pred CEEEEEEeccCCCceEEEEECCCC----------EEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeec----------
Confidence 589999764 2345554443 89999999999999999999997531 111110
Q ss_pred HHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHH
Q 011476 203 VIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITA 282 (485)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~ 282 (485)
. +.....+++|+|||||++|+|+|..|++. +.+|+++++.+.++. + .
T Consensus 348 ------------~-~~~~~~~k~V~ViGgG~~g~E~A~~L~~~--------------g~~Vtlv~~~~~l~~--~----~ 394 (521)
T 1hyu_A 348 ------------C-DGPLFKGKRVAVIGGGNSGVEAAIDLAGI--------------VEHVTLLEFAPEMKA--D----Q 394 (521)
T ss_dssp ------------C-CGGGGBTSEEEEECCSHHHHHHHHHHHHH--------------BSEEEEECSSSSCCS--C----H
T ss_pred ------------C-chhhcCCCeEEEECCCHHHHHHHHHHHhh--------------CCEEEEEEeCcccCc--C----H
Confidence 0 00113568999999999999999999987 689999999987753 2 3
Q ss_pred HHHHHHHh-CCcEEEcCceEEEEeCC--c---EEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHH-hCCCCCCcee
Q 011476 283 FAEEKFSR-DGIDVKLGSMVVKVTDK--E---IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQ-VGQTNRRALA 355 (485)
Q Consensus 283 ~~~~~l~~-~gV~v~~~~~v~~v~~~--~---v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~-~g~~~~g~i~ 355 (485)
.+.+.+++ .||++++++.++++.++ + +.+....+|+..++++|.|++|+| ..|++ .+++. +.++.+|+|.
T Consensus 395 ~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G--~~pn~-~~l~~~l~~~~~G~I~ 471 (521)
T 1hyu_A 395 VLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIG--LLPNT-HWLEGALERNRMGEII 471 (521)
T ss_dssp HHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCC--EEESC-GGGTTTSCBCTTSCBC
T ss_pred HHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcC--CCCCc-hHHhhhhccCCCCcEE
Confidence 45667777 69999999999999753 3 344433457666799999999999 68888 45544 2236789999
Q ss_pred eCCCccccCCCCeEEeccccCCCCcchHHHHHHHHhhcc
Q 011476 356 TDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKAD 394 (485)
Q Consensus 356 vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~a~ 394 (485)
||++++| +.|+|||+|||+..+...+..++.++..+|.
T Consensus 472 Vd~~~~t-s~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~ 509 (521)
T 1hyu_A 472 IDAKCET-SVKGVFAAGDCTTVPYKQIIIATGEGAKASL 509 (521)
T ss_dssp CCTTCBC-SSTTEEECSTTBCCSSCCHHHHHHHHHHHHH
T ss_pred eCCCCCC-CCCCEEEeecccCCCcceeeehHHhHHHHHH
Confidence 9999998 9999999999999876667778877766553
No 75
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=4.9e-33 Score=287.15 Aligned_cols=273 Identities=23% Similarity=0.302 Sum_probs=203.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCcc----c------------------cc----cCccccc-
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLP----S------------------VT----CGTVEAR- 110 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~----~------------------~~----~~~~~~~- 110 (485)
.+||+|||||+||+++|++|++.|++|+|||+ +.+|+.+... . +. ....+..
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 104 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWEK 104 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 47999999999999999999999999999999 5566542211 0 00 0001111
Q ss_pred ----------ccccchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEe-cCCccCCCCCceEEeecCEEEEccCCCCC-CC
Q 011476 111 ----------SIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCR-SSQNTNLNGKEEFCMDYDYLVIAMGARAN-TF 178 (485)
Q Consensus 111 ----------~~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~-~~~~~~~~~~~~~~~~yd~lviAtG~~~~-~~ 178 (485)
.+...+...+++.+++ ++.+.+..++. +.+.+. ++. .+.||+||+|||+.|. .|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g~~~~i~~--~~v~v~~~~~----------~~~~d~lviAtG~~p~~~p 170 (484)
T 3o0h_A 105 LVAAKNKEISRLEGLYREGLQNSNVH--IYESRAVFVDE--HTLELSVTGE----------RISAEKILIATGAKIVSNS 170 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCE--EEESCEEEEET--TEEEETTTCC----------EEEEEEEEECCCEEECCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEEeeC--CEEEEecCCe----------EEEeCEEEEccCCCcccCC
Confidence 1222344556677866 56777888875 567664 332 8999999999999999 89
Q ss_pred CCCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCC
Q 011476 179 NTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVK 258 (485)
Q Consensus 179 ~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~ 258 (485)
++||.+ .+...... +. +. ..+++++|||+|++|+|+|..+.++
T Consensus 171 ~i~G~~-~~~~~~~~-------------~~---~~-------~~~~~v~ViGgG~~g~e~A~~l~~~------------- 213 (484)
T 3o0h_A 171 AIKGSD-LCLTSNEI-------------FD---LE-------KLPKSIVIVGGGYIGVEFANIFHGL------------- 213 (484)
T ss_dssp -CBTGG-GSBCTTTG-------------GG---CS-------SCCSEEEEECCSHHHHHHHHHHHHT-------------
T ss_pred CCCCcc-ccccHHHH-------------Hh---HH-------hcCCcEEEECcCHHHHHHHHHHHHc-------------
Confidence 999974 22221111 11 11 1346999999999999999999987
Q ss_pred CCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCCCCC
Q 011476 259 DSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPH 336 (485)
Q Consensus 259 ~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~ 336 (485)
|.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|++++. +++.+.. .+|+. +++|.||+|+| ..
T Consensus 214 -g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~-~~g~~--i~aD~Vi~A~G--~~ 287 (484)
T 3o0h_A 214 -GVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVL-TNGQT--ICADRVMLATG--RV 287 (484)
T ss_dssp -TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEE-TTSCE--EEESEEEECCC--EE
T ss_pred -CCeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEE-CCCcE--EEcCEEEEeeC--CC
Confidence 68999999999999999999999999999999999999999999975 3454444 56764 99999999999 68
Q ss_pred cchHHH-HHHhCC--CCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHH
Q 011476 337 AIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIF 390 (485)
Q Consensus 337 p~~~~l-~~~~g~--~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~ 390 (485)
|++..| ++.+|+ +.+|+|.||+++|| +.|+|||+|||+..+.. ...+..++.
T Consensus 288 p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~~-~~~A~~~g~ 342 (484)
T 3o0h_A 288 PNTTGLGLERAGVKVNEFGAVVVDEKMTT-NVSHIWAVGDVTGHIQL-TPVAIHDAM 342 (484)
T ss_dssp ECCTTCCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGTSCCC-HHHHHHHHH
T ss_pred cCCCCCChhhcCceECCCCCEeECCCCCC-CCCCEEEEEecCCCCcC-HHHHHHHHH
Confidence 888444 678887 66799999999997 99999999999985432 333444333
No 76
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.97 E-value=4.5e-31 Score=263.03 Aligned_cols=268 Identities=16% Similarity=0.225 Sum_probs=183.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCC-cEEEEcCCCCcccCC---------Ccccc---ccCc------------------
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRNYFAFTP---------LLPSV---TCGT------------------ 106 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~-~V~lie~~~~~~~~~---------~~~~~---~~~~------------------ 106 (485)
.++|+|||||++|+++|++|++.|+ +|+|||+++ +++.. ..+.. ..+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNE 82 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccccc
Confidence 4799999999999999999999999 999999986 33210 00000 0000
Q ss_pred --ccccccccchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCC
Q 011476 107 --VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE 184 (485)
Q Consensus 107 --~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~ 184 (485)
.....+...+..++++.++++ +.++.|..++++++.+.+.... + .+.||+||+|||+.+. |.+|+
T Consensus 83 ~~~~~~~~~~~l~~~~~~~gv~i-~~~~~v~~i~~~~~~~~v~~~~------g---~~~~d~vVlAtG~~~~-p~ip~-- 149 (369)
T 3d1c_A 83 EHISGETYAEYLQVVANHYELNI-FENTVVTNISADDAYYTIATTT------E---TYHADYIFVATGDYNF-PKKPF-- 149 (369)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCEE-ECSCCEEEEEECSSSEEEEESS------C---CEEEEEEEECCCSTTS-BCCCS--
T ss_pred cCCCHHHHHHHHHHHHHHcCCeE-EeCCEEEEEEECCCeEEEEeCC------C---EEEeCEEEECCCCCCc-cCCCC--
Confidence 011223344566677788876 3466788888765434343221 1 5889999999999865 56666
Q ss_pred CccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEE
Q 011476 185 ENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKIT 264 (485)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vt 264 (485)
........+.+ ....++++|+|||+|++|+|+|..|.+. +.+|+
T Consensus 150 ~~~~~~~~~~~----------------------~~~~~~~~vvVvG~G~~g~e~a~~l~~~--------------g~~V~ 193 (369)
T 3d1c_A 150 KYGIHYSEIED----------------------FDNFNKGQYVVIGGNESGFDAAYQLAKN--------------GSDIA 193 (369)
T ss_dssp SSCEEGGGCSC----------------------GGGSCSSEEEEECCSHHHHHHHHHHHHT--------------TCEEE
T ss_pred CceechhhcCC----------------------hhhcCCCEEEEECCCcCHHHHHHHHHhc--------------CCeEE
Confidence 22222211100 0012457999999999999999999986 68999
Q ss_pred EEecCccccc-------cccHHHHHHHHHHHHhCC-cEEEcCceEEEEe--CCcEEEEEcCCCeEEEEecCeEEEccCCC
Q 011476 265 LLEAADHILN-------MFDKRITAFAEEKFSRDG-IDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGIA 334 (485)
Q Consensus 265 lv~~~~~~l~-------~~~~~~~~~~~~~l~~~g-V~v~~~~~v~~v~--~~~v~~~~~~~G~~~~i~~D~vi~a~G~~ 334 (485)
++++.+.+++ .+++...+.+.+.+++.| |++++++.|.+++ ++.+.+.. .+|+. ...+|.||+|+|
T Consensus 194 lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~-~~g~~-~~~~d~vi~a~G-- 269 (369)
T 3d1c_A 194 LYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISF-DSGQS-VHTPHEPILATG-- 269 (369)
T ss_dssp EECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEE-SSSCC-EEESSCCEECCC--
T ss_pred EEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEe-cCCeE-eccCCceEEeec--
Confidence 9999988764 256777888999999997 9999999999994 44444443 56764 234699999999
Q ss_pred CCcchHHHHHHhCC-CCCCceeeCCCccccCCCCeEEeccccCCCCc
Q 011476 335 PHAIIKDFMKQVGQ-TNRRALATDEWLRVEGSDSIYALGDCATVNQR 380 (485)
Q Consensus 335 ~~p~~~~l~~~~g~-~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~ 380 (485)
..|++. ++.+.++ +.+|+|.||++++.++.|+|||+|||+..+..
T Consensus 270 ~~~~~~-~~~~~~~~~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~ 315 (369)
T 3d1c_A 270 FDATKN-PIVQQLFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNA 315 (369)
T ss_dssp BCGGGS-HHHHHHSCCTTSCCCBCTTSBBSSSTTEEECSTTCCCSSC
T ss_pred cCCccc-hhhhhhccCCCCCEEechhhcccCCCCeEEeccccccCCe
Confidence 678773 4444345 66788999987444499999999999986543
No 77
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=3.1e-31 Score=262.55 Aligned_cols=279 Identities=15% Similarity=0.171 Sum_probs=192.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCc---------cc---cccCc---------ccccccccch
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL---------PS---VTCGT---------VEARSIVEPV 116 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~---------~~---~~~~~---------~~~~~~~~~~ 116 (485)
.++|+|||||++|+++|..|++.|++|+|||+++.+++.... +. ...+. ....++...+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYL 82 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHH
Confidence 469999999999999999999999999999999876643110 00 00000 0113455567
Q ss_pred HHHHhhCCCeEEEEEeEEEEEecCCCEEE-EecCCccCCCCCceEEeecCEEEEccCC--CCCCCCCCCCCCc---cccc
Q 011476 117 RNIVRKKNVDICFWEAECFKIDAENKKVY-CRSSQNTNLNGKEEFCMDYDYLVIAMGA--RANTFNTPGVEEN---CNFL 190 (485)
Q Consensus 117 ~~~~~~~gv~v~~~~~~v~~id~~~~~v~-~~~~~~~~~~~~~~~~~~yd~lviAtG~--~~~~~~i~G~~~~---~~~~ 190 (485)
.+.+++.++++ ..+++|+.++..++.+. +.... + .+.||+||+|||+ .|+.|++||.+.. ....
T Consensus 83 ~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~v~~~~------g---~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~ 152 (357)
T 4a9w_A 83 AQYEQKYALPV-LRPIRVQRVSHFGERLRVVARDG------R---QWLARAVISATGTWGEAYTPEYQGLESFAGIQLHS 152 (357)
T ss_dssp HHHHHHTTCCE-ECSCCEEEEEEETTEEEEEETTS------C---EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEG
T ss_pred HHHHHHcCCEE-EcCCEEEEEEECCCcEEEEEeCC------C---EEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEe
Confidence 77778889886 36788999998888766 65432 1 8999999999995 6777899997531 1111
Q ss_pred cChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecC-
Q 011476 191 KEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAA- 269 (485)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~- 269 (485)
.... ......+++|+|||+|++|+|+|..|.+. + +|++++++
T Consensus 153 ~~~~----------------------~~~~~~~~~v~VvG~G~~g~e~a~~l~~~--------------~-~v~~v~~~~ 195 (357)
T 4a9w_A 153 AHYS----------------------TPAPFAGMRVAIIGGGNSGAQILAEVSTV--------------A-ETTWITQHE 195 (357)
T ss_dssp GGCC----------------------CSGGGTTSEEEEECCSHHHHHHHHHHTTT--------------S-EEEEECSSC
T ss_pred ccCC----------------------ChhhcCCCEEEEECCCcCHHHHHHHHHhh--------------C-CEEEEECCC
Confidence 1110 00113567999999999999999999986 4 69999988
Q ss_pred ccccccc--cHHHHHHHHHHHH----------------------------hCCcEEEcCceEEEEeCCcEEEEEcCCCeE
Q 011476 270 DHILNMF--DKRITAFAEEKFS----------------------------RDGIDVKLGSMVVKVTDKEIFTKVRGNGET 319 (485)
Q Consensus 270 ~~~l~~~--~~~~~~~~~~~l~----------------------------~~gV~v~~~~~v~~v~~~~v~~~~~~~G~~ 319 (485)
+.+++.. ...+...+.+.+. +.|+ +..+..+.+++.+++. +.+|++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~~~v~---~~~g~~ 271 (357)
T 4a9w_A 196 PAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSPTGMQ---WADGTE 271 (357)
T ss_dssp CCBCCTTCCTHHHHTC----------------------CBCCCHHHHHHHHTTC-CCEECCCSEEETTEEE---CTTSCE
T ss_pred CeecchhhcCccHHHHHHHHHhccccccCCCcccccccCcccChhHHHHHhcCc-eEEecCcceEeCCeeE---ECCCCE
Confidence 4555532 2333333333332 4454 5666777777776643 356765
Q ss_pred EEEecCeEEEccCCCCCcchHHHHHHhCC-CCCCceeeCCC--ccccCCCCeEEec--cccCCCCcchHHHHHHHHhhc
Q 011476 320 SSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALATDEW--LRVEGSDSIYALG--DCATVNQRRVMEDIAAIFSKA 393 (485)
Q Consensus 320 ~~i~~D~vi~a~G~~~~p~~~~l~~~~g~-~~~g~i~vd~~--l~t~~~~~Vya~G--D~~~~~~~~~~~~~~~~~~~a 393 (485)
++||.||+|+| ..|++ .+++.+++ +.+|+|.||++ ++| +.|+|||+| ||+......+..++.++..+|
T Consensus 272 --i~~D~vi~a~G--~~p~~-~~l~~~gl~~~~G~i~vd~~~l~~t-~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a 344 (357)
T 4a9w_A 272 --RAFDAVIWCTG--FRPAL-SHLKGLDLVTPQGQVEVDGSGLRAL-AVPSVWLLGYGDWNGMASATLIGVTRYAREAV 344 (357)
T ss_dssp --EECSEEEECCC--BCCCC-GGGTTTTCBCTTSCBCBCTTSCBBS-SCTTEEECSSCGGGSTTCSSTTTHHHHHHHHH
T ss_pred --ecCCEEEECCC--cCCCC-cccCcccccCCCCCccccCCcccCC-CCCCeEEeccccccccchhhhhhhHHHHHHHH
Confidence 99999999999 68887 67788888 67889999999 776 999999999 666643444555555554443
No 78
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.97 E-value=2.4e-31 Score=271.40 Aligned_cols=301 Identities=13% Similarity=0.115 Sum_probs=195.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCC-C------CCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNN-P------SYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFW 130 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~-~------g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 130 (485)
+++|+||||||||+++|.+|++ . +++|+|||+.+.+++.+ ...+.+......++...+.+++++.++++ +
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~-~~gv~p~~~~~~~~~~~~~~~~~~~~v~~--~ 79 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLV-RSGVAPDHPKIKSISKQFEKTAEDPRFRF--F 79 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHH-HHTSCTTCTGGGGGHHHHHHHHTSTTEEE--E
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCcc-ccccCCCCCCHHHHHHHHHHHHhcCCCEE--E
Confidence 5799999999999999999988 6 99999999998776543 22233333344567777888888888654 3
Q ss_pred EeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCC-CCCCCCCCCC-CccccccChhHHHHHHHHHHHHHh
Q 011476 131 EAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGAR-ANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFE 208 (485)
Q Consensus 131 ~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~-~~~~~i~G~~-~~~~~~~~~~~~~~~~~~~~~~~~ 208 (485)
.. +. + ++.|.+.++ .+.||+||+|||+. ++.+++||.+ .+++. ..+...+.+...++.
T Consensus 80 ~~-v~-v---~~~v~~~~~-----------~~~~d~lViAtG~~~~~~~~ipG~~~~gv~~---~~~~~~~~~~~~d~~- 139 (456)
T 1lqt_A 80 GN-VV-V---GEHVQPGEL-----------SERYDAVIYAVGAQSDRMLNIPGEDLPGSIA---AVDFVGWYNAHPHFE- 139 (456)
T ss_dssp ES-CC-B---TTTBCHHHH-----------HHHSSEEEECCCCCEECCCCCTTTTSTTEEE---HHHHHHHHTTCGGGT-
T ss_pred ee-EE-E---CCEEEECCC-----------eEeCCEEEEeeCCCCCCCCCCCCCCCCCcEE---HHHHHhhhhcCcccc-
Confidence 33 21 2 233433321 57899999999997 7888999975 33332 222222211111110
Q ss_pred hcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcC-----C-CCC-ceEEEEecCccccccccH---
Q 011476 209 KASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPK-----V-KDS-VKITLLEAADHILNMFDK--- 278 (485)
Q Consensus 209 ~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~-----~-~~g-~~Vtlv~~~~~~l~~~~~--- 278 (485)
..++. ..+++|+|||+|++|+|+|..|.+...+.....++. + ..+ .+|++++|++.+...+..
T Consensus 140 -~~~~~------~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~el 212 (456)
T 1lqt_A 140 -QVSPD------LSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLEL 212 (456)
T ss_dssp -TCCCC------CCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHH
T ss_pred -cchhh------cCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHH
Confidence 11111 145799999999999999999997532111000000 0 013 499999999876443221
Q ss_pred ----------------HH------------------HHHHHHHHHh------CCcEEEcCceEEEEeCC-c---EEEEEc
Q 011476 279 ----------------RI------------------TAFAEEKFSR------DGIDVKLGSMVVKVTDK-E---IFTKVR 314 (485)
Q Consensus 279 ----------------~~------------------~~~~~~~l~~------~gV~v~~~~~v~~v~~~-~---v~~~~~ 314 (485)
++ .+.+.+.+++ .||++++++.+++|.++ . +.+...
T Consensus 213 rel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~ 292 (456)
T 1lqt_A 213 RELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRN 292 (456)
T ss_dssp HHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEE
T ss_pred HHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEE
Confidence 11 2445555556 79999999999999764 2 444321
Q ss_pred -------------CCCeEEEEecCeEEEccCCCCCcchHHHHHHhCCCCCCceeeCCCccccCCCCeEEeccccCCCCcc
Q 011476 315 -------------GNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGDCATVNQRR 381 (485)
Q Consensus 315 -------------~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~ 381 (485)
.+|+..+++||.||+|+|+ .|+. + ..+.++.+|+|.+|+++|+++.|+|||+|||+..+...
T Consensus 293 ~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~--~p~~--l-~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~~~ 367 (456)
T 1lqt_A 293 ELVSDGSGRVAAKDTGEREELPAQLVVRSVGY--RGVP--T-PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGV 367 (456)
T ss_dssp EEEECSSSSEEEEEEEEEEEEECSEEEECSCE--ECCC--C-TTSCCBTTTTBCCEETTEETTCSSEEECTHHHHCSCSC
T ss_pred EecCCCcccccccCCCceEEEEcCEEEEcccc--ccCC--C-CCCcccCCCCeeECCCCcCCCCCCEEEEeccCCCCchh
Confidence 1355457999999999994 5554 2 23445777899999999955899999999999766544
Q ss_pred hHHHHHHHHhhc
Q 011476 382 VMEDIAAIFSKA 393 (485)
Q Consensus 382 ~~~~~~~~~~~a 393 (485)
+..++..+..++
T Consensus 368 i~~a~~~g~~~a 379 (456)
T 1lqt_A 368 IGTNKKDAQDTV 379 (456)
T ss_dssp TTHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 444555555443
No 79
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.97 E-value=1.1e-31 Score=274.13 Aligned_cols=303 Identities=15% Similarity=0.148 Sum_probs=191.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCC--CcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPS--YDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g--~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v 134 (485)
.+++|+||||||||+++|..|++.| ++|+|||+.+.+++.. .....+......++...+.+++++.++++. .+..+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~-~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~-~~~~v 82 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLV-RFGVAPDHPEVKNVINTFTQTARSDRCAFY-GNVEV 82 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHH-HHTSCTTCGGGGGHHHHHHHHHTSTTEEEE-BSCCB
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCcee-ecccCCCCccHHHHHHHHHHHHHhCCcEEE-eeeEE
Confidence 4579999999999999999999777 9999999998775432 112222222334566667788888886642 22222
Q ss_pred EEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCC-CCCCCCCCC-CccccccChhHHHHHHHHHHHHHhhcCC
Q 011476 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARA-NTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASL 212 (485)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~-~~~~i~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (485)
.+.|.+.+ ..+.||+||+|||+.+ +.|++||.+ ++++...+ ...+.+... +...+
T Consensus 83 ------~~~V~~~~-----------~~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~---~~~~~~~~~---d~~~~ 139 (460)
T 1cjc_A 83 ------GRDVTVQE-----------LQDAYHAVVLSYGAEDHQALDIPGEELPGVFSARA---FVGWYNGLP---ENREL 139 (460)
T ss_dssp ------TTTBCHHH-----------HHHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHH---HHHHHTTCG---GGTTC
T ss_pred ------eeEEEecc-----------ceEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHH---HHHHhhcCc---ccccc
Confidence 12233222 1578999999999995 788999985 34443221 111111000 00111
Q ss_pred CCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcC-----C-CCCc-eEEEEecCccc-------------
Q 011476 213 PNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPK-----V-KDSV-KITLLEAADHI------------- 272 (485)
Q Consensus 213 ~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~-----~-~~g~-~Vtlv~~~~~~------------- 272 (485)
+. . ..+++++|||+|++|+|+|..|.+...+-.....+. + ..+. +|++++|++.+
T Consensus 140 ~~--~---~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~ 214 (460)
T 1cjc_A 140 AP--D---LSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMI 214 (460)
T ss_dssp CC--C---TTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHH
T ss_pred cc--C---CCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhh
Confidence 10 0 145799999999999999999985211100000000 0 1245 79999998865
Q ss_pred -cccc-------------------cH---HHHHHHHHHHHh--------------CCcEEEcCceEEEEeCC----c---
Q 011476 273 -LNMF-------------------DK---RITAFAEEKFSR--------------DGIDVKLGSMVVKVTDK----E--- 308 (485)
Q Consensus 273 -l~~~-------------------~~---~~~~~~~~~l~~--------------~gV~v~~~~~v~~v~~~----~--- 308 (485)
++.. +. .+.+.+.+.+++ .||++++++.+++|.++ .
T Consensus 215 ~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~ 294 (460)
T 1cjc_A 215 QLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAG 294 (460)
T ss_dssp TCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEE
T ss_pred cCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEE
Confidence 2210 01 033444555555 89999999999999643 3
Q ss_pred EEEEEc------------CCCeEEEEecCeEEEccCCCCCcchHHHHHHh-CCCCCCceeeCCCccccCCCCeEEecccc
Q 011476 309 IFTKVR------------GNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV-GQTNRRALATDEWLRVEGSDSIYALGDCA 375 (485)
Q Consensus 309 v~~~~~------------~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~-g~~~~g~i~vd~~l~t~~~~~Vya~GD~~ 375 (485)
+.+... .+|+..+++||+||+|+| ..|+. + ..+ .++.+|+|.+|+++||.+.|+|||+|||+
T Consensus 295 v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G--~~p~~--l-~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~ 369 (460)
T 1cjc_A 295 IRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIG--YKSRP--I-DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVK 369 (460)
T ss_dssp EEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCC--EECCC--C-CTTSCCBTTTTBCCEETTEETTCTTEEECTHHH
T ss_pred EEEEEEEEccccCCCcccCCCceEEEEcCEEEECCC--CCCCC--C-CCCcccccCCCeeECCCCcCcCCCCEEEEEeCC
Confidence 333211 035545699999999999 46655 2 233 44667899999999983379999999999
Q ss_pred CCCCcchHHHHHHHHhhcc
Q 011476 376 TVNQRRVMEDIAAIFSKAD 394 (485)
Q Consensus 376 ~~~~~~~~~~~~~~~~~a~ 394 (485)
..+...+..++..++.+|.
T Consensus 370 ~g~~~~i~~a~~~g~~aa~ 388 (460)
T 1cjc_A 370 RGPTGVITTTMTDSFLTGQ 388 (460)
T ss_dssp HCTTCCHHHHHHHHHHHHH
T ss_pred cCCCccHHHHHHHHHHHHH
Confidence 7665545566666665544
No 80
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.97 E-value=7.7e-31 Score=291.97 Aligned_cols=283 Identities=14% Similarity=0.139 Sum_probs=191.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCC-cEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~-~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~ 135 (485)
+.++|+||||||||++||.+|++.|+ +|+|||+.+.+++.. ....+ ....+.++.....+++++.|++++ .....
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~-~~~ip-~~~~~~~~~~~~~~~~~~~gv~~~--~~~~v 261 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS-TSEIP-QFRLPYDVVNFEIELMKDLGVKII--CGKSL 261 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH-HHTSC-TTTSCHHHHHHHHHHHHTTTCEEE--ESCCB
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc-cccCC-cccCCHHHHHHHHHHHHHCCcEEE--cccEe
Confidence 46899999999999999999999999 799999998888742 11111 111122445555677888897753 33222
Q ss_pred EEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCC-CCCCCCC-CCCC--CccccccChhHHHHHHHHHHHHHh---
Q 011476 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGA-RANTFNT-PGVE--ENCNFLKEVEDAQRIRRNVIESFE--- 208 (485)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~-~~~~~~i-~G~~--~~~~~~~~~~~~~~~~~~~~~~~~--- 208 (485)
. .+.+.+.++. .+.||+||||||+ .|+.+++ +|.+ ++++. ..+ +...+.+...
T Consensus 262 ~----~~~v~~~~~~----------~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~---a~~---~L~~~~~~~~~~~ 321 (1025)
T 1gte_A 262 S----ENEITLNTLK----------EEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYT---SKD---FLPLVAKSSKAGM 321 (1025)
T ss_dssp S----TTSBCHHHHH----------HTTCCEEEECCCCCEECCCGGGTTCCTTTTEEE---HHH---HHHHHHHHHCBTT
T ss_pred c----cceEEhhhcC----------ccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEE---hHH---HHHHHHhhccccc
Confidence 1 1233333321 5789999999999 5887765 4653 23332 222 2222211100
Q ss_pred ---hcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCc-eEEEEecCc-cccccccHHHHHH
Q 011476 209 ---KASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV-KITLLEAAD-HILNMFDKRITAF 283 (485)
Q Consensus 209 ---~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~-~Vtlv~~~~-~~l~~~~~~~~~~ 283 (485)
...++. .+++|+|||||++|+|+|..+.++ |. +||++++++ .+++.+++++
T Consensus 322 ~~~~~~~~~-------~~~~VvVIGgG~~g~e~A~~~~~~--------------G~~~Vtvv~r~~~~~~~~~~~e~--- 377 (1025)
T 1gte_A 322 CACHSPLPS-------IRGAVIVLGAGDTAFDCATSALRC--------------GARRVFLVFRKGFVNIRAVPEEV--- 377 (1025)
T ss_dssp BSCCCCCCC-------CCSEEEEECSSHHHHHHHHHHHHT--------------TCSEEEEECSSCGGGCCSCHHHH---
T ss_pred ccccccccc-------cCCcEEEECCChHHHHHHHHHHHc--------------CCCEEEEEEecChhhCCCCHHHH---
Confidence 011221 245999999999999999999987 44 899999998 4667766654
Q ss_pred HHHHHHhCCcEEEcCceEEEEeC--CcEEEEEc------CC-------CeEEEEecCeEEEccCCCCCcchHHHHHHh-C
Q 011476 284 AEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVR------GN-------GETSSMPYGMVVWSTGIAPHAIIKDFMKQV-G 347 (485)
Q Consensus 284 ~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~------~~-------G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~-g 347 (485)
+.+++.||++++++.++++.. +.+..+.. .+ |++.++++|.||+|+| ..|+...|+.++ |
T Consensus 378 --~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G--~~~~~~~l~~~~~g 453 (1025)
T 1gte_A 378 --ELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFG--SVLRDPKVKEALSP 453 (1025)
T ss_dssp --HHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSC--EECCCHHHHHHTTT
T ss_pred --HHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCC--CCCCchhhhhcccC
Confidence 567889999999999999863 33321111 12 3345699999999999 555433676663 6
Q ss_pred C--CCCCceeeCC-CccccCCCCeEEeccccCCCCcchHHHHHHHHhhc
Q 011476 348 Q--TNRRALATDE-WLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKA 393 (485)
Q Consensus 348 ~--~~~g~i~vd~-~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~a 393 (485)
+ +.+|+|.||+ ++|| +.|+|||+|||+..+. .+..++.++..+|
T Consensus 454 l~~~~~G~I~vd~~~~~T-s~~~VfA~GD~~~~~~-~~~~A~~~G~~aA 500 (1025)
T 1gte_A 454 IKFNRWDLPEVDPETMQT-SEPWVFAGGDIVGMAN-TTVESVNDGKQAS 500 (1025)
T ss_dssp SCBCTTSSBCCCTTTCBC-SSTTEEECSGGGCSCC-CHHHHHHHHHHHH
T ss_pred ceECCCCCEEECCCCCcc-CCCCEEEeCCCCCCch-HHHHHHHHHHHHH
Confidence 6 6689999997 8998 9999999999998654 3555665555443
No 81
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.97 E-value=1.1e-30 Score=281.38 Aligned_cols=281 Identities=16% Similarity=0.140 Sum_probs=189.5
Q ss_pred CCCCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeE
Q 011476 54 MGIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAE 133 (485)
Q Consensus 54 ~~~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~ 133 (485)
+...+++|+||||||||++||++|++.|++|+|||+++.+++........++......+...+...++... . ....
T Consensus 385 ~~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~-~---~~~~ 460 (729)
T 1o94_A 385 QTKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLL-K---KNKE 460 (729)
T ss_dssp CCSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHH-H---HSTT
T ss_pred cccCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhh-c---ccCC
Confidence 44567899999999999999999999999999999998887753322222222222222222333333220 0 0000
Q ss_pred EEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCC--------CCCCCCCCCCCccccccChhHHHHHHHHHHH
Q 011476 134 CFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGAR--------ANTFNTPGVEENCNFLKEVEDAQRIRRNVIE 205 (485)
Q Consensus 134 v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~--------~~~~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 205 (485)
+..+.. ++.+.+.++. .+.||+||||||+. |+.|++||.++....+.+..+..
T Consensus 461 ~v~i~~-~~~v~~~~~~----------~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l-------- 521 (729)
T 1o94_A 461 SQLALG-QKPMTADDVL----------QYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVM-------- 521 (729)
T ss_dssp CEEECS-CCCCCHHHHH----------TSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHH--------
T ss_pred ceEEEe-CeEEehhhcc----------ccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHh--------
Confidence 111111 1233333221 57899999999998 46778999752111122222221
Q ss_pred HHhhcCCCCCCHHHHhhcccEEEEC--CChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccccc--ccHHHH
Q 011476 206 SFEKASLPNLSDEERKRILHFVIVG--GGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM--FDKRIT 281 (485)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~vvVVG--gG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~--~~~~~~ 281 (485)
.. .. ..+++|+||| ||++|+|+|..|.++ |.+||++++.+ +++. ++.. .
T Consensus 522 --~~-~~--------~~gk~VvVIG~GgG~~g~e~A~~l~~~--------------G~~Vtlv~~~~-l~~~~~~~~~-~ 574 (729)
T 1o94_A 522 --DG-KK--------KIGKRVVILNADTYFMAPSLAEKLATA--------------GHEVTIVSGVH-LANYMHFTLE-Y 574 (729)
T ss_dssp --HC-CS--------CCCSEEEEEECCCSSHHHHHHHHHHHT--------------TCEEEEEESSC-TTHHHHHTTC-H
T ss_pred --cC-CC--------CCCCeEEEEcCCCCchHHHHHHHHHHc--------------CCEEEEEeccc-cccccccccc-H
Confidence 10 11 2467999999 999999999999987 68999999998 6552 3333 4
Q ss_pred HHHHHHHHhCCcEEEcCceEEEEeCCcEEEEEc-CCC-----------------eEEEEecCeEEEccCCCCCcchHHHH
Q 011476 282 AFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVR-GNG-----------------ETSSMPYGMVVWSTGIAPHAIIKDFM 343 (485)
Q Consensus 282 ~~~~~~l~~~gV~v~~~~~v~~v~~~~v~~~~~-~~G-----------------~~~~i~~D~vi~a~G~~~~p~~~~l~ 343 (485)
..+.+.+++.||++++++.+++++++++.+... .++ ++.+++||.||+|+| ..|++ .|+
T Consensus 575 ~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G--~~p~~-~l~ 651 (729)
T 1o94_A 575 PNMMRRLHELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTG--RHSEC-TLW 651 (729)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESC--EEECC-HHH
T ss_pred HHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCC--CCCCh-HHH
Confidence 677888999999999999999999887665532 122 123489999999999 68888 566
Q ss_pred HHhCCCCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHhhcccC
Q 011476 344 KQVGQTNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKADKD 396 (485)
Q Consensus 344 ~~~g~~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~a~~~ 396 (485)
+.++. .+|++++| +.|+|||+|||+.. ..+..++.++..+|..+
T Consensus 652 ~~l~~------~vd~~~~t-~~~~VyAiGD~~~~--~~~~~A~~~G~~aA~~i 695 (729)
T 1o94_A 652 NELKA------RESEWAEN-DIKGIYLIGDAEAP--RLIADATFTGHRVAREI 695 (729)
T ss_dssp HHHHH------TGGGTGGG-TCCEEEECGGGTSC--CCHHHHHHHHHHHHHTT
T ss_pred HHHhh------hccccccc-CCCCeEEEeCccch--hhHHHHHHHHHHHHHHh
Confidence 65532 36889998 89999999999973 34677888887776654
No 82
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.97 E-value=1.7e-30 Score=278.94 Aligned_cols=306 Identities=15% Similarity=0.082 Sum_probs=214.5
Q ss_pred CCCCchhhhhhhhcccceeEeeccccCCCCCC-----CCCCCCCCCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 17 YSSLSKLIVISTVGGGSLIAYSEANASSDAYS-----VAPPEMGIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
++|..|..++.... ......|..+|...... +...++...+++|+|||||+||++||++|++.|++|+|||+++
T Consensus 346 ~~c~~c~~C~~~~~-~~~~~~C~vnp~~g~e~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~ 424 (690)
T 3k30_A 346 RECIGCNICVSGDL-TMSPIRCTQNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGR 424 (690)
T ss_dssp CCCCCCCHHHHHHH-TTSCCCCSSCTTTTTTTTTCCCSSCCCCCSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred ccccchhhhhhccc-CCCcccCCcCcccCcccccccCccccCcccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 46666665433221 22233455555543221 1223345567899999999999999999999999999999999
Q ss_pred CcccCCCccccccCcccccccccchHHHHhhC-CCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEc
Q 011476 92 YFAFTPLLPSVTCGTVEARSIVEPVRNIVRKK-NVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIA 170 (485)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviA 170 (485)
.+++.+......++.....++...+...+.+. ++++. .... +...+. ..+.||+||+|
T Consensus 425 ~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~-~~~~----------v~~~~~----------~~~~~d~lvlA 483 (690)
T 3k30_A 425 DLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIY-RESP----------MTGDDI----------VEFGFEHVITA 483 (690)
T ss_dssp SSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEE-SSCC----------CCHHHH----------HHTTCCEEEEC
T ss_pred CCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEE-ECCe----------ecHHHH----------hhcCCCEEEEc
Confidence 88886554444455555556667777778776 76542 1211 211221 16789999999
Q ss_pred cCCCC--------CCCCCCCCCC-ccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEEC--CChhHHHHH
Q 011476 171 MGARA--------NTFNTPGVEE-NCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVG--GGPTGVEFA 239 (485)
Q Consensus 171 tG~~~--------~~~~i~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVG--gG~~g~e~A 239 (485)
||+.| ..|++||.+. .++ +..+. +.. .. ..+++|+||| +|++|+|+|
T Consensus 484 tG~~~~~~~~~~~~~~~i~G~~~~~v~---~~~~~----------l~~-~~--------~~g~~VvViG~ggG~~g~e~A 541 (690)
T 3k30_A 484 TGATWRTDGVARFHTTALPIAEGMQVL---GPDDL----------FAG-RL--------PDGKKVVVYDDDHYYLGGVVA 541 (690)
T ss_dssp CCEEECSSCCSSSCSSCCCBCTTSEEE---CHHHH----------HTT-CC--------CSSSEEEEEECSCSSHHHHHH
T ss_pred CCCccccccccccCCCCCCCCCCCcEE---cHHHH----------hCC-CC--------CCCCEEEEEcCCCCccHHHHH
Confidence 99984 4678888752 222 22111 111 11 2457899999 999999999
Q ss_pred HHHHHhhHHHHHhhCcCCCCCceEEEEecCcccccccc-HHHHHHHHHHHHhCCcEEEcCceEEEEeCCcEEEEEcCCCe
Q 011476 240 AELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFD-KRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGE 318 (485)
Q Consensus 240 ~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~-~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~~v~~~~~~~G~ 318 (485)
..|.+. +.+|+++++.+.+++..+ ......+.+.+++.||+++++++|++++.+++.+....+++
T Consensus 542 ~~L~~~--------------g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~ 607 (690)
T 3k30_A 542 ELLAQK--------------GYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASI 607 (690)
T ss_dssp HHHHHT--------------TCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCC
T ss_pred HHHHhC--------------CCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCe
Confidence 999987 689999999998877543 55677888999999999999999999998887776544455
Q ss_pred EEEEecCeEEEccCCCCCcchHHHHHHhCCCCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHhhccc
Q 011476 319 TSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKADK 395 (485)
Q Consensus 319 ~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~a~~ 395 (485)
..++++|.||+|+| ..|+. .|++.++.. +. +| +.|+|||+|||+.. ..+..++.++..+|..
T Consensus 608 ~~~i~aD~VV~A~G--~~p~~-~l~~~l~~~--~~-------~t-~~~~VyaiGD~~~~--~~~~~A~~~g~~aa~~ 669 (690)
T 3k30_A 608 ERELECDAVVMVTA--RLPRE-ELYLDLVAR--RD-------AG-EIASVRGIGDAWAP--GTIAAAVWSGRRAAEE 669 (690)
T ss_dssp EEEEECSEEEEESC--EEECC-HHHHHHHHH--HH-------HT-SCSEEEECGGGTSC--BCHHHHHHHHHHHHHH
T ss_pred EEEEECCEEEECCC--CCCCh-HHHHHHhhh--hc-------cc-CCCCEEEEeCCCch--hhHHHHHHHHHHHHHH
Confidence 45699999999999 68887 566555321 11 55 89999999999975 3456677777766554
No 83
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.97 E-value=5.8e-29 Score=254.90 Aligned_cols=256 Identities=11% Similarity=0.147 Sum_probs=180.2
Q ss_pred CeEEEECCcHHHHHHHHhcCC---CCCc---EEEEcCCCCcccCCCcccc------------------c-----------
Q 011476 59 KKVVVLGTGWAGTSFLKNLNN---PSYD---VQVISPRNYFAFTPLLPSV------------------T----------- 103 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~---~g~~---V~lie~~~~~~~~~~~~~~------------------~----------- 103 (485)
++|+|||||+||+++|..|++ .|++ |+|||+++.+|+....... .
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 699999999999999999998 9999 9999999877754321100 0
Q ss_pred ------------cCcccccccccchHHHHhhCCCe--EEEEEeEEEEEecCCC----EEEEecCCccCCCCCceEEeecC
Q 011476 104 ------------CGTVEARSIVEPVRNIVRKKNVD--ICFWEAECFKIDAENK----KVYCRSSQNTNLNGKEEFCMDYD 165 (485)
Q Consensus 104 ------------~~~~~~~~~~~~~~~~~~~~gv~--v~~~~~~v~~id~~~~----~v~~~~~~~~~~~~~~~~~~~yd 165 (485)
........+...+.+++++.+++ ++ .+++|+.++...+ .|++.++. .++...+.||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~-~~~~V~~v~~~~~~~~~~V~~~~~~-----~g~~~~~~~d 156 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIR-FNTAVRHVEFNEDSQTFTVTVQDHT-----TDTIYSEEFD 156 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEE-CSEEEEEEEEETTTTEEEEEEEETT-----TTEEEEEEES
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEE-eCCEEEEEEEcCCCCcEEEEEEEcC-----CCceEEEEcC
Confidence 00011123444566666777876 53 5788999987655 56655431 1223478999
Q ss_pred EEEEccC--CCCCCCCCCCCCCc---cccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHH
Q 011476 166 YLVIAMG--ARANTFNTPGVEEN---CNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAA 240 (485)
Q Consensus 166 ~lviAtG--~~~~~~~i~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~ 240 (485)
+||+||| +.|+.|++||.+.. ++....+.+ .....+++|+|||+|++|+|+|.
T Consensus 157 ~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~----------------------~~~~~~k~VvVVG~G~sg~eiA~ 214 (464)
T 2xve_A 157 YVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRD----------------------ALEFKDKTVLLVGSSYSAEDIGS 214 (464)
T ss_dssp EEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCC----------------------GGGGTTSEEEEECCSTTHHHHHH
T ss_pred EEEECCCCCCCCccCCCCCcccCCceEEehhhhCC----------------------HhHcCCCEEEEEcCCCCHHHHHH
Confidence 9999999 88999999997631 222111111 01135689999999999999999
Q ss_pred HHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeCCcEEEEEcCCCeEE
Q 011476 241 ELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETS 320 (485)
Q Consensus 241 ~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~~v~~~~~~~G~~~ 320 (485)
.|.+. +.+|+++++++.+++..- ..||+++ ..|++++++++.+ .+|+.
T Consensus 215 ~l~~~--------------g~~V~li~~~~~~~~~~~------------~~~V~~~--~~V~~i~~~~V~~---~dG~~- 262 (464)
T 2xve_A 215 QCYKY--------------GAKKLISCYRTAPMGYKW------------PENWDER--PNLVRVDTENAYF---ADGSS- 262 (464)
T ss_dssp HHHHT--------------TCSEEEEECSSCCCCCCC------------CTTEEEC--SCEEEECSSEEEE---TTSCE-
T ss_pred HHHHh--------------CCeEEEEEECCCCCCCCC------------CCceEEc--CCeEEEeCCEEEE---CCCCE-
Confidence 99997 689999999988765311 2588887 7899998776543 46875
Q ss_pred EEecCeEEEccCCCCCcchHHHHHHhCCC--CCCceeeCCC---ccccCCCCeEEeccccCCCC
Q 011476 321 SMPYGMVVWSTGIAPHAIIKDFMKQVGQT--NRRALATDEW---LRVEGSDSIYALGDCATVNQ 379 (485)
Q Consensus 321 ~i~~D~vi~a~G~~~~p~~~~l~~~~g~~--~~g~i~vd~~---l~t~~~~~Vya~GD~~~~~~ 379 (485)
+++|.||+|+| ..|++..|.+.+++. .++.+ ++.+ +++ +.|+|||+|||+....
T Consensus 263 -i~~D~Vi~atG--~~p~~~~l~~~~gl~~~~~~~v-~~~~~~~~~t-~~p~i~aiGd~~~~~~ 321 (464)
T 2xve_A 263 -EKVDAIILCTG--YIHHFPFLNDDLRLVTNNRLWP-LNLYKGVVWE-DNPKFFYIGMQDQWYS 321 (464)
T ss_dssp -EECSEEEECCC--BCCCCTTBCTTTCCCCCSSSCC-SSEETTTEES-SSTTEEECSCSCCSSC
T ss_pred -EeCCEEEECCC--CCCCCCCcCcccccccCCCccc-ccccceEecC-CCCCEEEEeCcccccc
Confidence 89999999999 678874333346763 33344 3432 555 8999999999987543
No 84
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.97 E-value=4.7e-30 Score=283.76 Aligned_cols=284 Identities=14% Similarity=0.151 Sum_probs=195.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCcc--ccccCcccccccccchHHHHhhC-CCeEEEEEeEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLP--SVTCGTVEARSIVEPVRNIVRKK-NVDICFWEAEC 134 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-gv~v~~~~~~v 134 (485)
.+|||||||||||++||.+|++.|++|+|||+++.++++.... ....+. ...++...+.+.+.++ ++++ +.+.+|
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~-~~~~~~~~~~~~l~~~~~v~~-~~~~~V 205 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGM-DSSAWIEQVTSELAEAEETTH-LQRTTV 205 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTE-EHHHHHHHHHHHHHHSTTEEE-ESSEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCC-CHHHHHHHHHHHHhhcCCcEE-EeCCEE
Confidence 4789999999999999999999999999999998888764420 111111 1123333444445554 7665 346688
Q ss_pred EEEecCCCEEEEecC-CccCCC------CCceEEeecCEEEEccCCCCCCCCCCCCC-CccccccChhHHHHHHHHHHHH
Q 011476 135 FKIDAENKKVYCRSS-QNTNLN------GKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIES 206 (485)
Q Consensus 135 ~~id~~~~~v~~~~~-~~~~~~------~~~~~~~~yd~lviAtG~~~~~~~i~G~~-~~~~~~~~~~~~~~~~~~~~~~ 206 (485)
..++..+....+... ...... +++...+.||+||||||+.|+.+++||.+ ++++...+..+ .+
T Consensus 206 ~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~~gv~~~~~~~~------~l--- 276 (965)
T 2gag_A 206 FGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRPGIMLAGAVRS------YL--- 276 (965)
T ss_dssp EEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCSTTEEEHHHHHH------HH---
T ss_pred EeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCCCCEEEhHHHHH------HH---
Confidence 888876543333211 011111 11224789999999999999999999986 44443322211 11
Q ss_pred HhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHH
Q 011476 207 FEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEE 286 (485)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~ 286 (485)
.. .. ...+++++|||+|++|+|+|..|.++ |.+|+++++++.+++. .+
T Consensus 277 -~~--~~------~~~gk~vvViGgG~~g~E~A~~L~~~--------------G~~Vtvv~~~~~~~~~---------~~ 324 (965)
T 2gag_A 277 -NR--YG------VRAGARIAVATTNDSAYELVRELAAT--------------GGVVAVIDARSSISAA---------AA 324 (965)
T ss_dssp -HT--TC------EESCSSEEEEESSTTHHHHHHHHGGG--------------TCCSEEEESCSSCCHH---------HH
T ss_pred -Hh--cC------CCCCCeEEEEcCCHHHHHHHHHHHHc--------------CCcEEEEECCCccchh---------HH
Confidence 10 00 02457999999999999999999987 5789999999877531 46
Q ss_pred HHHhCCcEEEcCceEEEEeC--C-c---EEEEEc-C---CCeEEEEecCeEEEccCCCCCcchHHHHHHhCCCCCCceee
Q 011476 287 KFSRDGIDVKLGSMVVKVTD--K-E---IFTKVR-G---NGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALAT 356 (485)
Q Consensus 287 ~l~~~gV~v~~~~~v~~v~~--~-~---v~~~~~-~---~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~~~~g~i~v 356 (485)
.+++.||++++++.++++.+ + + +++... . +|+..+++||.|++|+| ..|++ .++... ++.|.+
T Consensus 325 ~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G--~~P~~-~l~~~~----~g~i~v 397 (965)
T 2gag_A 325 QAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGG--FNPVV-HLHSQR----QGKLDW 397 (965)
T ss_dssp HHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECC--EEECC-HHHHHT----TCCEEE
T ss_pred HHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCC--cCcCh-HHHHhC----CCcEEE
Confidence 78899999999999999975 3 2 333320 1 25445699999999999 78998 566554 368999
Q ss_pred CCCccc----cCCCCeEEeccccCCCCcchHHHHHHHHhhc
Q 011476 357 DEWLRV----EGSDSIYALGDCATVNQRRVMEDIAAIFSKA 393 (485)
Q Consensus 357 d~~l~t----~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~a 393 (485)
|++++. ++.|+|||+|||+..+. +..++.++..+|
T Consensus 398 d~~~~~~v~~ts~p~IyAaGD~a~~~~--l~~A~~~G~~aA 436 (965)
T 2gag_A 398 DTTIHAFVPADAVANQHLAGAMTGRLD--TASALSTGAATG 436 (965)
T ss_dssp ETTTTEEEECSCCTTEEECGGGGTCCS--HHHHHHHHHHHH
T ss_pred cCcccccccCCCCCCEEEEEecCCchh--HHHHHHHHHHHH
Confidence 998871 38999999999998754 345555555444
No 85
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.96 E-value=2e-29 Score=258.98 Aligned_cols=281 Identities=15% Similarity=0.184 Sum_probs=182.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCC-----CcEEEEcCCCCcccCCCc--cccccC------------------------
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPS-----YDVQVISPRNYFAFTPLL--PSVTCG------------------------ 105 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g-----~~V~lie~~~~~~~~~~~--~~~~~~------------------------ 105 (485)
..++|+|||||+||+++|..|++.| ++|+|||+++.++|.+.. +.....
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~ 108 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLH 108 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhh
Confidence 4579999999999999999999888 999999999988875421 110000
Q ss_pred ------------c--ccccccccchHHHHhhCCCeEEEEEeEEEEEecC---CC----EEEEecCCccCCCCCceEEeec
Q 011476 106 ------------T--VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAE---NK----KVYCRSSQNTNLNGKEEFCMDY 164 (485)
Q Consensus 106 ------------~--~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~id~~---~~----~v~~~~~~~~~~~~~~~~~~~y 164 (485)
. ....++...+..+.++++++++ .+++|+.+++. ++ .|.+.++. ++.+.+.|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~-~~~~V~~i~~~~~~~~~~~~~V~~~~g~------g~~~~~~~ 181 (463)
T 3s5w_A 109 KHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSR-YGEEVLRIEPMLSAGQVEALRVISRNAD------GEELVRTT 181 (463)
T ss_dssp HTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEE-ESEEEEEEEEEEETTEEEEEEEEEEETT------SCEEEEEE
T ss_pred hcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEE-eCCEEEEEEEecCCCceEEEEEEEecCC------CceEEEEe
Confidence 0 0011222334455566777774 57789998875 44 44444432 23347999
Q ss_pred CEEEEccCCCCCCCC-CCCCCC--ccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHH
Q 011476 165 DYLVIAMGARANTFN-TPGVEE--NCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAE 241 (485)
Q Consensus 165 d~lviAtG~~~~~~~-i~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~ 241 (485)
|+||+|||+.|+.|+ +++... .++......+.. ..+. .....+++|+|||||.+|+|+|..
T Consensus 182 d~lVlAtG~~p~~p~~~~~~~~~~~~~~~~~~~~~~------------~~~~----~~~~~~~~vvVvGgG~sg~e~a~~ 245 (463)
T 3s5w_A 182 RALVVSPGGTPRIPQVFRALKGDGRVFHHSQYLEHM------------AKQP----CSSGKPMKIAIIGGGQSAAEAFID 245 (463)
T ss_dssp SEEEECCCCEECCCGGGGGGTTCTTEEEGGGHHHHH------------CC-----------CEEEEEECCSHHHHHHHHH
T ss_pred CEEEECCCCCCCCcchhhhcCCCCcEEECHHHHhhH------------HHhh----hcccCCCeEEEECCCHhHHHHHHH
Confidence 999999999887765 333322 222222221110 0000 001246799999999999999999
Q ss_pred HHHhhHHHHHhhCcCCCCCceEEEEecCcccccc--------------------ccHHHHHHHHHHHHh-----------
Q 011476 242 LHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM--------------------FDKRITAFAEEKFSR----------- 290 (485)
Q Consensus 242 l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~--------------------~~~~~~~~~~~~l~~----------- 290 (485)
|.+.. ++.+|++++|++.+++. ++++....+.+.+..
T Consensus 246 l~~~~------------~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (463)
T 3s5w_A 246 LNDSY------------PSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLI 313 (463)
T ss_dssp HHHHC------------TTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHH
T ss_pred HHhcC------------CCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHH
Confidence 99862 35899999999977542 222322333333222
Q ss_pred ---------------CCcEEEcCceEEEEeC--Cc--EEEEEcCCCeEEEEecCeEEEccCCCCCcc--hHHHHHHhCCC
Q 011476 291 ---------------DGIDVKLGSMVVKVTD--KE--IFTKVRGNGETSSMPYGMVVWSTGIAPHAI--IKDFMKQVGQT 349 (485)
Q Consensus 291 ---------------~gV~v~~~~~v~~v~~--~~--v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~--~~~l~~~~g~~ 349 (485)
.||++++++.|++++. +. +.+....+|+..++++|.||+|+|+ .|+ . .+++.+...
T Consensus 314 ~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~--~p~~~~-~~l~~l~~~ 390 (463)
T 3s5w_A 314 ERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGY--ERQLHR-QLLEPLAEY 390 (463)
T ss_dssp HHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCE--ECCC-C-TTTGGGGGG
T ss_pred HHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCC--CCCCcc-chhHHHHHH
Confidence 6999999999999975 33 4444434677777999999999995 555 4 444444332
Q ss_pred CCCceeeCCCccccC----CCCeEEeccccC
Q 011476 350 NRRALATDEWLRVEG----SDSIYALGDCAT 376 (485)
Q Consensus 350 ~~g~i~vd~~l~t~~----~~~Vya~GD~~~ 376 (485)
. |+|.||+++++.. .|+|||+|||..
T Consensus 391 ~-g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~ 420 (463)
T 3s5w_A 391 L-GDHEIGRDYRLQTDERCKVAIYAQGFSQA 420 (463)
T ss_dssp B-C--CCCTTSBCCBCTTBCSEEEESSCCHH
T ss_pred h-CCcccCcccccccCCCCCCeEEEcCCCcc
Confidence 2 8899999998743 456999999975
No 86
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.96 E-value=1.3e-29 Score=271.37 Aligned_cols=275 Identities=17% Similarity=0.175 Sum_probs=197.4
Q ss_pred CCCCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeE
Q 011476 54 MGIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAE 133 (485)
Q Consensus 54 ~~~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~ 133 (485)
+...+++|+|||||+||++||..|++.|++|+|||+++.+++.+.+.....+.....++...+.+.+++.+++++ ....
T Consensus 369 ~~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~-~~~~ 447 (671)
T 1ps9_A 369 PAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLK-LNHT 447 (671)
T ss_dssp SCSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEE-ESCC
T ss_pred CCCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEE-eCcE
Confidence 345578999999999999999999999999999999998888654433333332223444556677778887753 2222
Q ss_pred EEEEecCCCEEEEecCCccCCCCCceEEe-ecCEEEEccCCCCCCCCCCCCCC-ccccccChhHHHHHHHHHHHHHhhcC
Q 011476 134 CFKIDAENKKVYCRSSQNTNLNGKEEFCM-DYDYLVIAMGARANTFNTPGVEE-NCNFLKEVEDAQRIRRNVIESFEKAS 211 (485)
Q Consensus 134 v~~id~~~~~v~~~~~~~~~~~~~~~~~~-~yd~lviAtG~~~~~~~i~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (485)
+. . . .+ .||+||||||+.|+.|++||.+. +++.. .+. +...
T Consensus 448 v~---~----------~----------~~~~~d~lviAtG~~p~~~~i~G~~~~~v~~~---~~~----------l~~~- 490 (671)
T 1ps9_A 448 VT---A----------D----------QLQAFDETILASGIVPRTPPIDGIDHPKVLSY---LDV----------LRDK- 490 (671)
T ss_dssp CC---S----------S----------SSCCSSEEEECCCEEECCCCCBTTTSTTEEEH---HHH----------HTSC-
T ss_pred ec---H----------H----------HhhcCCEEEEccCCCcCCCCCCCCCCCcEeeH---HHH----------hhCC-
Confidence 11 0 0 34 89999999999999999999863 33322 111 1110
Q ss_pred CCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHH------HHhh----------------CcCC-CCCceEEEEec
Q 011476 212 LPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDED------LFKL----------------YPKV-KDSVKITLLEA 268 (485)
Q Consensus 212 ~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~------~~~~----------------~p~~-~~g~~Vtlv~~ 268 (485)
...+++|+|||||++|+|+|..|.+++.+. +.+. .|.. ....+|+++++
T Consensus 491 --------~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 562 (671)
T 1ps9_A 491 --------APVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQR 562 (671)
T ss_dssp --------CCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECS
T ss_pred --------CCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEe
Confidence 024579999999999999999999876321 1111 1221 12368999998
Q ss_pred Cccccc-cccHHHHHHHHHHHHhCCcEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhC
Q 011476 269 ADHILN-MFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVG 347 (485)
Q Consensus 269 ~~~~l~-~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g 347 (485)
.+..+. .+++.....+.+.|++.||++++++++++++++++.+. .+|+..++++|.||+|+| ..|++ .|++.+
T Consensus 563 ~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~--~~G~~~~i~~D~Vi~a~G--~~p~~-~l~~~l- 636 (671)
T 1ps9_A 563 KASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVV--INGETQVLAVDNVVICAG--QEPNR-ALAQPL- 636 (671)
T ss_dssp SCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEE--ETTEEEEECCSEEEECCC--EEECC-TTHHHH-
T ss_pred cchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEe--cCCeEEEEeCCEEEECCC--ccccH-HHHHHH-
Confidence 876654 46667777888999999999999999999998876664 367655699999999999 68887 555543
Q ss_pred CCCCCceeeCCCccccCCCCeEEeccccCCCCcchHHHHHHHHhhcc
Q 011476 348 QTNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKAD 394 (485)
Q Consensus 348 ~~~~g~i~vd~~l~t~~~~~Vya~GD~~~~~~~~~~~~~~~~~~~a~ 394 (485)
+. ..++||++|||+.........++.+++.+|.
T Consensus 637 -------------~~-~g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~ 669 (671)
T 1ps9_A 637 -------------ID-SGKTVHLIGGCDVAMELDARRAIAQGTRLAL 669 (671)
T ss_dssp -------------HT-TTCCEEECGGGTCCSSCCHHHHHHHHHHHHH
T ss_pred -------------Hh-cCCCEEEECCcCccCchhHHHHHHHHHHHHH
Confidence 22 3468999999998765557778888776654
No 87
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.95 E-value=5.2e-27 Score=239.74 Aligned_cols=258 Identities=14% Similarity=0.092 Sum_probs=171.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCC--cEEEEcCCCCcccCCCccccc----------------------------cCc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPRNYFAFTPLLPSVT----------------------------CGT 106 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~--~V~lie~~~~~~~~~~~~~~~----------------------------~~~ 106 (485)
+.++|+|||||++|+++|..|++.|+ +|+|||+.+.+++........ ...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 35799999999999999999999999 999999987766532211100 000
Q ss_pred ---------------------------ccccccccchHHHHhhCCCeEEEEEeEEEEEecCCC--EEEEecCCccCCCCC
Q 011476 107 ---------------------------VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENK--KVYCRSSQNTNLNGK 157 (485)
Q Consensus 107 ---------------------------~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~--~v~~~~~~~~~~~~~ 157 (485)
.....+...+..+.++.+..++ .+++|+.++...+ .|++.+.. ++
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~-~~t~V~~v~~~~~~~~V~~~~~~-----~G 158 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIK-LATDVLDIEKKDGSWVVTYKGTK-----AG 158 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEE-CSEEEEEEEEETTEEEEEEEESS-----TT
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEE-eCCEEEEEEeCCCeEEEEEeecC-----CC
Confidence 0001222334555555566664 5788999987666 34444311 12
Q ss_pred c-eEEeecCEEEEccCC--CCCCCCCCCCCCc-------cccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEE
Q 011476 158 E-EFCMDYDYLVIAMGA--RANTFNTPGVEEN-------CNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFV 227 (485)
Q Consensus 158 ~-~~~~~yd~lviAtG~--~~~~~~i~G~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv 227 (485)
+ ...+.||+||+|||+ .|+.|++||.++. ++..+.+.+ .+...+++|+
T Consensus 159 ~~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~----------------------~~~~~~k~Vv 216 (447)
T 2gv8_A 159 SPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFRE----------------------PELFVGESVL 216 (447)
T ss_dssp CCEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCC----------------------GGGGTTCCEE
T ss_pred CeeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCC----------------------hhhcCCCEEE
Confidence 2 236899999999998 7888899996421 221111111 1113568999
Q ss_pred EECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCce-EEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeC
Q 011476 228 IVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVK-ITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD 306 (485)
Q Consensus 228 VVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~-Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~ 306 (485)
|||+|++|+|+|..|.+. +.+ |+++++++.+ ++..||.+ ...|+++..
T Consensus 217 VvG~G~sg~e~A~~l~~~--------------~~~~V~l~~r~~~~---------------l~~~~i~~--~~~v~~~~~ 265 (447)
T 2gv8_A 217 VVGGASSANDLVRHLTPV--------------AKHPIYQSLLGGGD---------------IQNESLQQ--VPEITKFDP 265 (447)
T ss_dssp EECSSHHHHHHHHHHTTT--------------SCSSEEEECTTCCS---------------CBCSSEEE--ECCEEEEET
T ss_pred EEccCcCHHHHHHHHHHH--------------hCCcEEEEeCCCCc---------------CCCCCeEE--ecCeEEEec
Confidence 999999999999999987 567 9999998765 34567774 577888854
Q ss_pred CcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHH-----HHHh--CCCCCCceeeCCCccc--cCCCCeEEeccccCC
Q 011476 307 KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDF-----MKQV--GQTNRRALATDEWLRV--EGSDSIYALGDCATV 377 (485)
Q Consensus 307 ~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l-----~~~~--g~~~~g~i~vd~~l~t--~~~~~Vya~GD~~~~ 377 (485)
++..+.. .+|+. ++++|.||+|+| ..|++ .+ ++.+ ++..++.+.++.+.++ ++.|+||++|||...
T Consensus 266 ~~~~v~~-~dG~~-~~~~D~vi~atG--~~~~~-~~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~ 340 (447)
T 2gv8_A 266 TTREIYL-KGGKV-LSNIDRVIYCTG--YLYSV-PFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHV 340 (447)
T ss_dssp TTTEEEE-TTTEE-ECCCSEEEECCC--BCCCC-CCHHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEESSCCBSS
T ss_pred CCCEEEE-CCCCE-eccCCEEEECCC--CCcCC-CCCcccccccccCceecCCCcccccccccccCCCCcEEEEeccccc
Confidence 3212222 56763 479999999999 67777 44 3333 2333444555544442 389999999999876
Q ss_pred C
Q 011476 378 N 378 (485)
Q Consensus 378 ~ 378 (485)
.
T Consensus 341 ~ 341 (447)
T 2gv8_A 341 V 341 (447)
T ss_dssp C
T ss_pred c
Confidence 4
No 88
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.95 E-value=9.4e-28 Score=247.79 Aligned_cols=254 Identities=18% Similarity=0.184 Sum_probs=175.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccc-cccCcc-cccccccchHHHHhhCCCeEEEEEeEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPS-VTCGTV-EARSIVEPVRNIVRKKNVDICFWEAECF 135 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~gv~v~~~~~~v~ 135 (485)
.+||+|||||+||+++|++|++. ++|+|||+++++++...... ...+.. ...++...+.+.+ ..++++ +.+..+.
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~-~~~~~v~ 184 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKI-YLETSAL 184 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEE-ETTEEEC
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEE-EcCCEEE
Confidence 46899999999999999999988 99999999998887532211 111110 1223333333333 457665 3567788
Q ss_pred EEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCC-CccccccChhHHHHHHHHHHHHHhhcCCCC
Q 011476 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASLPN 214 (485)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (485)
.++.+.+.+.+.... +++...+.||+||+|||+.|+.|++||.+ ++++.. .+...+.+. ...
T Consensus 185 ~i~~~~~~~~~~~~~-----~~~~~~~~~d~lvlAtGa~~~~~~~~g~~~~gv~~~---~~~~~~~~~-------~~~-- 247 (493)
T 1y56_A 185 GVFDKGEYFLVPVVR-----GDKLIEILAKRVVLATGAIDSTMLFENNDMPGVFRR---DFALEVMNV-------WEV-- 247 (493)
T ss_dssp CCEECSSSEEEEEEE-----TTEEEEEEESCEEECCCEEECCCCCTTTTSTTEEEH---HHHHHHHHT-------SCB--
T ss_pred EEEcCCcEEEEEEec-----CCeEEEEECCEEEECCCCCccCCCCCCCCCCCEEEc---HHHHHHHHh-------ccc--
Confidence 888776654432110 12234789999999999999999999986 444432 232222111 000
Q ss_pred CCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcE
Q 011476 215 LSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGID 294 (485)
Q Consensus 215 ~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~ 294 (485)
..+++++|||+|++|+| +.+++.||+
T Consensus 248 ------~~~~~vvViGgG~~gle------------------------------------------------~~l~~~GV~ 273 (493)
T 1y56_A 248 ------APGRKVAVTGSKADEVI------------------------------------------------QELERWGID 273 (493)
T ss_dssp ------CSCSEEEEESTTHHHHH------------------------------------------------HHHHHHTCE
T ss_pred ------CCCCEEEEECCCHHHHH------------------------------------------------HHHHhCCcE
Confidence 24579999999999987 335567999
Q ss_pred EEcCceEEEEeCCc-EEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC----CCCCcee-eCCCccccCCCCe
Q 011476 295 VKLGSMVVKVTDKE-IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ----TNRRALA-TDEWLRVEGSDSI 368 (485)
Q Consensus 295 v~~~~~v~~v~~~~-v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~----~~~g~i~-vd~~l~t~~~~~V 368 (485)
+++++.|+++..++ +..+...+|++ +++|.||+|+| ..|++ +|++.+|+ +.+|+|. ||++++ +.|+|
T Consensus 274 v~~~~~v~~i~~~~~v~~v~~~~g~~--i~aD~Vv~a~G--~~p~~-~l~~~~g~~~~~~~~g~i~~vd~~~~--s~~~v 346 (493)
T 1y56_A 274 YVHIPNVKRVEGNEKVERVIDMNNHE--YKVDALIFADG--RRPDI-NPITQAGGKLRFRRGYYSPVLDEYHR--IKDGI 346 (493)
T ss_dssp EEECSSEEEEECSSSCCEEEETTCCE--EECSEEEECCC--EEECC-HHHHHTTCCEEEETTEEEECCCTTSE--EETTE
T ss_pred EEeCCeeEEEecCCceEEEEeCCCeE--EEeCEEEECCC--cCcCc-hHHHhcCCCccccCCceeeccccccC--cCCCE
Confidence 99999999997643 33333456765 99999999999 68888 68888887 3577787 899998 78999
Q ss_pred EEeccccCCCCcchHHHHHHHHhhcc
Q 011476 369 YALGDCATVNQRRVMEDIAAIFSKAD 394 (485)
Q Consensus 369 ya~GD~~~~~~~~~~~~~~~~~~~a~ 394 (485)
||+|||+..+. +..+..++..+|.
T Consensus 347 ya~GD~~~~~~--~~~A~~~g~~aa~ 370 (493)
T 1y56_A 347 YVAGSAVSIKP--HYANYLEGKLVGA 370 (493)
T ss_dssp EECSTTTCCCC--HHHHHHHHHHHHH
T ss_pred EEEeccCCccC--HHHHHHHHHHHHH
Confidence 99999998643 4555555554443
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.94 E-value=2.9e-27 Score=245.97 Aligned_cols=265 Identities=15% Similarity=0.194 Sum_probs=180.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcC-CCCCcEEEEcCCCCcccCCCcc---cccc-----------------------Ccccc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLN-NPSYDVQVISPRNYFAFTPLLP---SVTC-----------------------GTVEA 109 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~-~~g~~V~lie~~~~~~~~~~~~---~~~~-----------------------~~~~~ 109 (485)
..++|+|||||++|+++|..|+ +.|++|+|||+++.++++.... ...+ .....
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~ 86 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQ 86 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCH
Confidence 3579999999999999999999 9999999999988776542111 1100 00112
Q ss_pred cccccchHHHHhhCCC--eEEEEEeEEEEEecCCC----EEEEecCCccCCCCCceEEeecCEEEEccC--CCCCCCCCC
Q 011476 110 RSIVEPVRNIVRKKNV--DICFWEAECFKIDAENK----KVYCRSSQNTNLNGKEEFCMDYDYLVIAMG--ARANTFNTP 181 (485)
Q Consensus 110 ~~~~~~~~~~~~~~gv--~v~~~~~~v~~id~~~~----~v~~~~~~~~~~~~~~~~~~~yd~lviAtG--~~~~~~~i~ 181 (485)
.++...+...++++++ .++ .+++|..++.+.+ .|.+.++. .+.||+||+||| +.|+.|++|
T Consensus 87 ~ei~~~l~~~~~~~g~~~~i~-~~~~V~~i~~~~~~~~~~V~~~~G~----------~i~ad~lV~AtG~~s~p~~p~ip 155 (540)
T 3gwf_A 87 PEILEYLEDVVDRFDLRRHFK-FGTEVTSALYLDDENLWEVTTDHGE----------VYRAKYVVNAVGLLSAINFPNLP 155 (540)
T ss_dssp HHHHHHHHHHHHHTTCGGGEE-ESCCEEEEEEETTTTEEEEEETTSC----------EEEEEEEEECCCSCCSBCCCCCT
T ss_pred HHHHHHHHHHHHHcCCcceeE-eccEEEEEEEeCCCCEEEEEEcCCC----------EEEeCEEEECCcccccCCCCCCC
Confidence 2445556777788887 664 5788888887665 45554443 799999999999 689999999
Q ss_pred CCCCc---cccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCC
Q 011476 182 GVEEN---CNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVK 258 (485)
Q Consensus 182 G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~ 258 (485)
|.+.. .+......+ .. ...+|+|+|||+|.+|+|+|..|++.
T Consensus 156 G~~~f~g~~~~~~~~~~---------------~~-------~~~~krV~VIG~G~sgve~a~~l~~~------------- 200 (540)
T 3gwf_A 156 GLDTFEGETIHTAAWPE---------------GK-------SLAGRRVGVIGTGSTGQQVITSLAPE------------- 200 (540)
T ss_dssp TGGGCCSEEEEGGGCCS---------------SC-------CCTTSEEEEECCSHHHHHHHHHHTTT-------------
T ss_pred CccccCCCEEEeecCCC---------------cc-------ccccceEEEECCCchHHHHHHHHHhh-------------
Confidence 97631 111111100 00 13568999999999999999999986
Q ss_pred CCceEEEEecCcc-cccccc----HHHHHHHH------------------------------------------------
Q 011476 259 DSVKITLLEAADH-ILNMFD----KRITAFAE------------------------------------------------ 285 (485)
Q Consensus 259 ~g~~Vtlv~~~~~-~l~~~~----~~~~~~~~------------------------------------------------ 285 (485)
+.+||+++|.+. +++.++ +...+.+.
T Consensus 201 -~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~ 279 (540)
T 3gwf_A 201 -VEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGF 279 (540)
T ss_dssp -CSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHH
T ss_pred -CCEEEEEECCCCccccCccCCCCHHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccch
Confidence 689999999998 344332 22211111
Q ss_pred -------------------------HH---------------------------------HHhCCcEEEc--CceEEEEe
Q 011476 286 -------------------------EK---------------------------------FSRDGIDVKL--GSMVVKVT 305 (485)
Q Consensus 286 -------------------------~~---------------------------------l~~~gV~v~~--~~~v~~v~ 305 (485)
+. +.+.+|+++. ...|.+|.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it 359 (540)
T 3gwf_A 280 RFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVT 359 (540)
T ss_dssp HHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEEC
T ss_pred hhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEe
Confidence 00 1145888886 78899999
Q ss_pred CCcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCCCCCCceeeCC----------CccccCCCCeEEe-ccc
Q 011476 306 DKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDE----------WLRVEGSDSIYAL-GDC 374 (485)
Q Consensus 306 ~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~~~~g~i~vd~----------~l~t~~~~~Vya~-GD~ 374 (485)
++++.. .+|++ +++|+||+|||+ .+++ .++..+++..++++.+++ .+.+.+.||+|.+ |..
T Consensus 360 ~~gv~~---~dG~~--~~~DvIV~ATGf--~~~~-~~~~~~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~ 431 (540)
T 3gwf_A 360 AKGVVT---EDGVL--HELDVLVFATGF--DAVD-GNYRRIEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPN 431 (540)
T ss_dssp SSEEEE---TTCCE--EECSEEEECCCB--SCSS-HHHHTSEEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSS
T ss_pred cCeEEc---CCCCE--EECCEEEECCcc--Cccc-cCcCcceEECCCCcCHHHhhccChhhccccccCCCCceEEEecCC
Confidence 887654 57876 999999999994 6655 344555553333333332 2455678999999 876
Q ss_pred cC
Q 011476 375 AT 376 (485)
Q Consensus 375 ~~ 376 (485)
+.
T Consensus 432 ~~ 433 (540)
T 3gwf_A 432 GP 433 (540)
T ss_dssp CB
T ss_pred CC
Confidence 55
No 90
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.93 E-value=1.1e-25 Score=234.39 Aligned_cols=170 Identities=14% Similarity=0.184 Sum_probs=122.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCcc---ccc-----------------------cCccccc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLP---SVT-----------------------CGTVEAR 110 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~---~~~-----------------------~~~~~~~ 110 (485)
..++|||||||++|+++|..|++.|++|+|||+++.++++.... ... .......
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ 99 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQP 99 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHH
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHH
Confidence 45799999999999999999999999999999988776532111 110 0011123
Q ss_pred ccccchHHHHhhCCC--eEEEEEeEEEEEecCCC----EEEEecCCccCCCCCceEEeecCEEEEccC--CCCCCCCCCC
Q 011476 111 SIVEPVRNIVRKKNV--DICFWEAECFKIDAENK----KVYCRSSQNTNLNGKEEFCMDYDYLVIAMG--ARANTFNTPG 182 (485)
Q Consensus 111 ~~~~~~~~~~~~~gv--~v~~~~~~v~~id~~~~----~v~~~~~~~~~~~~~~~~~~~yd~lviAtG--~~~~~~~i~G 182 (485)
++..++...++++++ +++ .+++|+.++.+.+ .|.+.++. .+.||+||+||| +.|+.|++||
T Consensus 100 ei~~yl~~~~~~~g~~~~i~-~~~~V~~i~~~~~~~~w~V~~~~G~----------~i~ad~lV~AtG~~s~p~~p~ipG 168 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIR-FDTRVTSAVLDEEGLRWTVRTDRGD----------EVSARFLVVAAGPLSNANTPAFDG 168 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEE-CSCCEEEEEEETTTTEEEEEETTCC----------EEEEEEEEECCCSEEECCCCCCTT
T ss_pred HHHHHHHHHHHHcCCCccEE-ECCEEEEEEEcCCCCEEEEEECCCC----------EEEeCEEEECcCCCCCCCCCCCCC
Confidence 455567777888887 564 5778888877665 55554443 799999999999 7899999999
Q ss_pred CCCc---cccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCC
Q 011476 183 VEEN---CNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKD 259 (485)
Q Consensus 183 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~ 259 (485)
.+.. .+......+ ..+ ...+|+|+|||+|.+|+|+|..|++.
T Consensus 169 ~~~f~g~~~~~~~~~~--------------~~~-------~~~~krV~VIG~G~sgve~a~~l~~~-------------- 213 (549)
T 4ap3_A 169 LDRFTGDIVHTARWPH--------------DGV-------DFTGKRVGVIGTGSSGIQSIPIIAEQ-------------- 213 (549)
T ss_dssp GGGCCSEEEEGGGCCT--------------TCC-------CCBTCEEEEECCSHHHHHHHHHHHHH--------------
T ss_pred cccCCCceEEeccccc--------------ccc-------ccCCCEEEEECCCchHHHHHHHHHhh--------------
Confidence 8631 111111000 000 02567999999999999999999987
Q ss_pred CceEEEEecCccc
Q 011476 260 SVKITLLEAADHI 272 (485)
Q Consensus 260 g~~Vtlv~~~~~~ 272 (485)
+.+||+++|.+.+
T Consensus 214 ~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 214 AEQLFVFQRSANY 226 (549)
T ss_dssp BSEEEEEESSCCC
T ss_pred CCEEEEEECCCCc
Confidence 6899999999974
No 91
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.92 E-value=4.9e-26 Score=236.98 Aligned_cols=176 Identities=12% Similarity=0.103 Sum_probs=118.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccc--------------------------cCccccc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT--------------------------CGTVEAR 110 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~--------------------------~~~~~~~ 110 (485)
..++|||||||++|+++|..|++.|++|+|||+++.++++.....++ .......
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ 87 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQP 87 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHH
Confidence 45799999999999999999999999999999998776642111111 0011123
Q ss_pred ccccchHHHHhhCCC--eEEEEEeEEEEEecCCC----EEEEecCCccCCCCCceEEeecCEEEEccC--CCCCCCCCCC
Q 011476 111 SIVEPVRNIVRKKNV--DICFWEAECFKIDAENK----KVYCRSSQNTNLNGKEEFCMDYDYLVIAMG--ARANTFNTPG 182 (485)
Q Consensus 111 ~~~~~~~~~~~~~gv--~v~~~~~~v~~id~~~~----~v~~~~~~~~~~~~~~~~~~~yd~lviAtG--~~~~~~~i~G 182 (485)
++..+++...+++++ .++ .+++|..++.+.. .|.+.++. .+.||+||+||| +.|+.|++||
T Consensus 88 ei~~yl~~~~~~~~l~~~i~-~~~~V~~~~~~~~~~~w~V~~~~G~----------~~~ad~lV~AtG~~s~p~~p~ipG 156 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYR-FNTRVTAARYVENDRLWEVTLDNEE----------VVTCRFLISATGPLSASRMPDIKG 156 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEE-CSCCEEEEEEEGGGTEEEEEETTTE----------EEEEEEEEECCCSCBC---CCCTT
T ss_pred HHHHHHHHHHHHcCCcCcEE-ECCEEEEEEEeCCCCEEEEEECCCC----------EEEeCEEEECcCCCCCCcCCCCCC
Confidence 455556677777776 554 5678888876544 55554432 799999999999 8899999999
Q ss_pred CCCc---cccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCC
Q 011476 183 VEEN---CNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKD 259 (485)
Q Consensus 183 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~ 259 (485)
.+.. .+...... ...+..+......+|+|+|||+|.+|+|+|..|++.
T Consensus 157 ~~~f~g~~~h~~~~~---------------~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~-------------- 207 (545)
T 3uox_A 157 IDSFKGESFHSSRWP---------------TDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAET-------------- 207 (545)
T ss_dssp GGGCCSEEEEGGGCC---------------BCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTT--------------
T ss_pred ccccCCCeEEccccc---------------ccccccccccccCCCeEEEECCCccHHHHHHHHHhh--------------
Confidence 7631 11110000 000000000013568999999999999999999986
Q ss_pred CceEEEEecCccc
Q 011476 260 SVKITLLEAADHI 272 (485)
Q Consensus 260 g~~Vtlv~~~~~~ 272 (485)
+.+||+++|.+++
T Consensus 208 ~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 208 AKELYVFQRTPNW 220 (545)
T ss_dssp BSEEEEEESSCCC
T ss_pred CCEEEEEEcCCCc
Confidence 6899999999974
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.90 E-value=7.4e-23 Score=213.75 Aligned_cols=170 Identities=16% Similarity=0.271 Sum_probs=114.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCC---cccccc-----------------------Cccccc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL---LPSVTC-----------------------GTVEAR 110 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~---~~~~~~-----------------------~~~~~~ 110 (485)
..++|+|||||++|+++|..|++.|++|+|||+++.++++.. .|.... ......
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 94 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQP 94 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHH
Confidence 357999999999999999999999999999999987765321 111000 000111
Q ss_pred ccccchHHHHhhCC--CeEEEEEeEEEEEecCC--CE--EEEecCCccCCCCCceEEeecCEEEEccC--CCCCCCCCCC
Q 011476 111 SIVEPVRNIVRKKN--VDICFWEAECFKIDAEN--KK--VYCRSSQNTNLNGKEEFCMDYDYLVIAMG--ARANTFNTPG 182 (485)
Q Consensus 111 ~~~~~~~~~~~~~g--v~v~~~~~~v~~id~~~--~~--v~~~~~~~~~~~~~~~~~~~yd~lviAtG--~~~~~~~i~G 182 (485)
++...+....++++ +.++ .+++|..++.+. +. |.+.++. .+.||+||+||| +.|+.|.+||
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~-~~~~V~~~~~~~~~~~w~V~~~~G~----------~~~ad~vV~AtG~~s~p~~p~i~G 163 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGIT-FHTTVTAAAFDEATNTWTVDTNHGD----------RIRARYLIMASGQLSVPQLPNFPG 163 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEE-CSCCEEEEEEETTTTEEEEEETTCC----------EEEEEEEEECCCSCCCCCCCCCTT
T ss_pred HHHHHHHHHHHHcCCCceEE-cCcEEEEEEEcCCCCeEEEEECCCC----------EEEeCEEEECcCCCCCCCCCCCCC
Confidence 23334455556665 3454 467788887643 23 4443332 789999999999 5688889999
Q ss_pred CCC--cc-ccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCC
Q 011476 183 VEE--NC-NFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKD 259 (485)
Q Consensus 183 ~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~ 259 (485)
.+. +. +....... ..+ ...+|+|+|||+|.+|+|+|..+++.
T Consensus 164 ~~~f~G~~~hs~~~~~--------------~~~-------~~~gk~V~VIG~G~sg~e~a~~l~~~-------------- 208 (542)
T 1w4x_A 164 LKDFAGNLYHTGNWPH--------------EPV-------DFSGQRVGVIGTGSSGIQVSPQIAKQ-------------- 208 (542)
T ss_dssp GGGCCSEEEEGGGCCS--------------SCC-------CCBTCEEEEECCSHHHHHHHHHHHHH--------------
T ss_pred cccCCCceEECCCCCC--------------chh-------ccCCCEEEEECCCccHHHHHHHHhhc--------------
Confidence 752 21 11100000 000 03568999999999999999999987
Q ss_pred CceEEEEecCccc
Q 011476 260 SVKITLLEAADHI 272 (485)
Q Consensus 260 g~~Vtlv~~~~~~ 272 (485)
+.+|+++.|.+.+
T Consensus 209 ~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 209 AAELFVFQRTPHF 221 (542)
T ss_dssp BSEEEEEESSCCC
T ss_pred CceEEEEEcCCcc
Confidence 5799999998766
No 93
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.83 E-value=4.2e-19 Score=183.28 Aligned_cols=184 Identities=13% Similarity=0.152 Sum_probs=121.5
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCC--------------CCCcEEEEcCCCCcccCC--CccccccCc-------------
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNN--------------PSYDVQVISPRNYFAFTP--LLPSVTCGT------------- 106 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~--------------~g~~V~lie~~~~~~~~~--~~~~~~~~~------------- 106 (485)
...+||||||+||+||++|..|.+ .+.....+|+.+.++|.+ +++......
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~ 116 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPR 116 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTT
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCC
Confidence 445899999999999999988752 234678999999888864 233221100
Q ss_pred -------------------------ccccccccchHHHHhhCCCeEEEEEeEEEEEecCC----------CEEEEecCCc
Q 011476 107 -------------------------VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAEN----------KKVYCRSSQN 151 (485)
Q Consensus 107 -------------------------~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~id~~~----------~~v~~~~~~~ 151 (485)
....++.++++...++.+..++ ++++|+.+.+.. -.|++.++.
T Consensus 117 s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vr-f~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~- 194 (501)
T 4b63_A 117 SSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVA-YGEEVVEVIPGKSDPSSSVVDFFTVRSRNVE- 194 (501)
T ss_dssp CTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEE-ESEEEEEEEEECSSTTSSCBCEEEEEEEETT-
T ss_pred CccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceE-cceEEEeeccccccccccccceEEEEEecCC-
Confidence 0112344556666666666675 577888886432 245555543
Q ss_pred cCCCCCceEEeecCEEEEccCCCCCCCCCCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEEEECC
Q 011476 152 TNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGG 231 (485)
Q Consensus 152 ~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGg 231 (485)
.++...+.+++||+|||..|..|..++....++....+.+ ..... . .....+|+|+|||+
T Consensus 195 ----~g~~~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~------~~~~~-~---------~~~~~gKrV~VVG~ 254 (501)
T 4b63_A 195 ----TGEISARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCT------TLPAL-L---------KDKSKPYNIAVLGS 254 (501)
T ss_dssp ----TCCEEEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHH------HHHHH-S---------CCTTSCCEEEEECC
T ss_pred ----CceEEEEEeCEEEECcCCCCCCCCCCCCCcceeecccccc------chhhc-c---------ccccCCcEEEEECC
Confidence 3445689999999999998888876655444443333222 11110 0 01146789999999
Q ss_pred ChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc
Q 011476 232 GPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL 273 (485)
Q Consensus 232 G~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l 273 (485)
|.+|+|++..|++.. ++.+|+++.|++.+.
T Consensus 255 G~SA~ei~~~L~~~~------------~~~~v~~~~R~~~~~ 284 (501)
T 4b63_A 255 GQSAAEIFHDLQKRY------------PNSRTTLIMRDSAMR 284 (501)
T ss_dssp SHHHHHHHHHHHHHS------------TTCEEEEECSSSSCC
T ss_pred cHHHHHHHHHHHhcC------------CCceEEEEeCCCccc
Confidence 999999999998752 357999999987654
No 94
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.80 E-value=9.6e-19 Score=155.58 Aligned_cols=143 Identities=20% Similarity=0.229 Sum_probs=115.7
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc---------cc-----cHHHHHHHHHHHHh
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN---------MF-----DKRITAFAEEKFSR 290 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~---------~~-----~~~~~~~~~~~l~~ 290 (485)
+++|||||++|+++|..|.+. +.+|+++++.+.+++ .+ +.++.+.+.+.+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~--------------g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 68 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARA--------------GLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARR 68 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHHC--------------CCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHH
Confidence 799999999999999999996 689999999886652 23 47888999999999
Q ss_pred CCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC--CCCCceeeCCCccccCCC
Q 011476 291 DGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVEGSD 366 (485)
Q Consensus 291 ~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~--~~~g~i~vd~~l~t~~~~ 366 (485)
.||+++++ +|++++. +.+.+.. .+| + +++|.||+|+| ..|+ +.+.+|+ + +|.|.||++++| +.|
T Consensus 69 ~gv~v~~~-~v~~i~~~~~~~~v~~-~~g-~--i~ad~vI~A~G--~~~~---~~~~~g~~~~-~g~i~vd~~~~t-~~~ 136 (180)
T 2ywl_A 69 YGAEVRPG-VVKGVRDMGGVFEVET-EEG-V--EKAERLLLCTH--KDPT---LPSLLGLTRR-GAYIDTDEGGRT-SYP 136 (180)
T ss_dssp TTCEEEEC-CCCEEEECSSSEEEEC-SSC-E--EEEEEEEECCT--TCCH---HHHHHTCCEE-TTEECCCTTCBC-SST
T ss_pred cCCEEEeC-EEEEEEEcCCEEEEEE-CCC-E--EEECEEEECCC--CCCC---ccccCCCCcc-CceEEeCCCCCc-CCC
Confidence 99999999 9999864 3444443 566 3 99999999999 5664 4566776 5 888999999998 999
Q ss_pred CeEEeccccCCCCcchHHHHHHHHhhc
Q 011476 367 SIYALGDCATVNQRRVMEDIAAIFSKA 393 (485)
Q Consensus 367 ~Vya~GD~~~~~~~~~~~~~~~~~~~a 393 (485)
+|||+|||+..+.+....++.++..+|
T Consensus 137 ~i~a~GD~~~~~~~~~~~A~~~g~~aa 163 (180)
T 2ywl_A 137 RVYAAGVARGKVPGHAIISAGDGAYVA 163 (180)
T ss_dssp TEEECGGGGTCCSCCHHHHHHHHHHHH
T ss_pred CEEEeecccCcchhhHHHHHHhHHHHH
Confidence 999999999986644566666655444
No 95
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.63 E-value=1.4e-17 Score=170.47 Aligned_cols=257 Identities=17% Similarity=0.183 Sum_probs=145.8
Q ss_pred eEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCC----------Ccc----c------------------------
Q 011476 60 KVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP----------LLP----S------------------------ 101 (485)
Q Consensus 60 ~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~----------~~~----~------------------------ 101 (485)
||+|||||+||+++|+.|++.|.+|+|||+. ..++.. +.+ .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 6999999999999999999999999999988 333321 000 0
Q ss_pred -------------cc--------cCcccc----------cccccchHHHHhhCCCeEEEEEeEEEEEecCCCEE---EEe
Q 011476 102 -------------VT--------CGTVEA----------RSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKV---YCR 147 (485)
Q Consensus 102 -------------~~--------~~~~~~----------~~~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v---~~~ 147 (485)
+. .+...+ ..+...+.+.+++.|+++ +.+..| ++..+++.+ .+.
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i-~~~~~v-~l~~~~~~v~Gv~v~ 157 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPI-IEDRLV-EIRVKDGKVTGFVTE 157 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCE-ECCCEE-EEEEETTEEEEEEET
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEE-EECcEE-EEEEeCCEEEEEEEE
Confidence 00 000000 012233444556678886 456678 886655544 332
Q ss_pred cCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCCccccccChhHHHHHHHHHHHHHhhcCCCCCCHHHHhhcccEE
Q 011476 148 SSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFV 227 (485)
Q Consensus 148 ~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv 227 (485)
+. + ..+.+|.||+|||+.+..++++.... .. ..+...+.... ......+... .....++
T Consensus 158 ~~------~---g~~~a~~VVlAtGg~~~~~~~~~~~~-~~----tGdgi~~a~~a--Ga~~~d~e~~-----q~~p~~~ 216 (472)
T 2e5v_A 158 KR------G---LVEDVDKLVLATGGYSYLYEYSSTQS-TN----IGDGMAIAFKA--GTILADMEFV-----QFHPTVT 216 (472)
T ss_dssp TT------E---EECCCSEEEECCCCCGGGSSSBSSCT-TC----SCHHHHHHHHT--TCCEECTTCE-----EEEEEEE
T ss_pred eC------C---CeEEeeeEEECCCCCcccCccccCCC-CC----chHHHHHHHHc--CCCEeCCcce-----EEEeEEE
Confidence 21 1 15779999999999886655432111 00 01111111000 0000111110 0011345
Q ss_pred EECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHH--------HHHHHHHHHhCCcEEEcCc
Q 011476 228 IVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRI--------TAFAEEKFSRDGIDVKLGS 299 (485)
Q Consensus 228 VVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~--------~~~~~~~l~~~gV~v~~~~ 299 (485)
++|+| +++++..+... |..+ +..+++++++.+++.. ...+.+.+++.|. ++++.
T Consensus 217 ~~ggg--~~~~ae~~~~~--------------G~~~-v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~ 278 (472)
T 2e5v_A 217 SLDGE--VFLLTETLRGE--------------GAQI-INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHK-VFIDL 278 (472)
T ss_dssp CGGGC--CEECCTHHHHT--------------TCEE-EETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCC-EEEEC
T ss_pred ccCCC--ceeeehhhcCC--------------ceEE-ECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCc-EEEec
Confidence 56766 77777777664 5566 7888889987655443 5566677776663 32221
Q ss_pred eEEEEeCCcEEEEEcCCCeEEEEe-cCeEEEccCCCCCcchHHHHHHh--CCCCCCceeeCCCccccCCCCeEEeccccC
Q 011476 300 MVVKVTDKEIFTKVRGNGETSSMP-YGMVVWSTGIAPHAIIKDFMKQV--GQTNRRALATDEWLRVEGSDSIYALGDCAT 376 (485)
Q Consensus 300 ~v~~v~~~~v~~~~~~~G~~~~i~-~D~vi~a~G~~~~p~~~~l~~~~--g~~~~g~i~vd~~l~t~~~~~Vya~GD~~~ 376 (485)
.. +. . + .+ .++ .+.++++.| ..|+ +++.-. .....|+|.||+++|| ++|||||+|||+.
T Consensus 279 ~~--~~--~--~-----~~--~~~~~~~~~~~~G--~dp~--~~i~v~p~~~~~~GGI~vd~~~~t-~ipgLyAaGd~a~ 340 (472)
T 2e5v_A 279 SK--IE--D--F-----ER--KFPVVAKYLARHG--HNYK--VKIPIFPAAHFVDGGIRVNIRGES-NIVNLYAIGEVSD 340 (472)
T ss_dssp TT--CT--T--H-----HH--HCHHHHHHHHHTT--CCTT--SCEECEEEEEEESCEEECCTTCBC-SSBTEEECGGGEE
T ss_pred cc--hH--H--H-----HH--HhHHHHHHHHHhC--cCcc--cceEeehhhceeCCCeEECCCCcc-ccCCEEecchhcc
Confidence 10 00 0 0 01 144 467777888 4555 222211 1134689999999998 9999999999987
No 96
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.52 E-value=2.2e-17 Score=161.19 Aligned_cols=227 Identities=13% Similarity=0.050 Sum_probs=135.0
Q ss_pred CCeEEEECCcHHHHHHHHhcC--CCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLN--NPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~--~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~ 135 (485)
.+||+||||||||++||++|+ +.|++|+|||+.+.+|+....... .++...+......++++.|+++.. .
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~---~~~~~~l~~~~~~~~~e~Gv~~~~-~---- 136 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQ---LFSAMVMRKPAHLFLQELEIPYED-E---- 136 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCST---TCCCEEEETTTHHHHHHTTCCCEE-C----
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCc---cCCHHHHHHHHHHHHHHcCCEEEE-C----
Confidence 469999999999999999996 679999999999998886543322 122223444566778888876421 1
Q ss_pred EEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCCCC-ccccccChhHHHHHHHHHHHHHhhcCCCC
Q 011476 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEE-NCNFLKEVEDAQRIRRNVIESFEKASLPN 214 (485)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (485)
.. .....+.++++++..++.+.++|... ...... ++..+....
T Consensus 137 -----~~-----------------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-------------~~~~~~~~~- 180 (326)
T 3fpz_A 137 -----GD-----------------YVVVKHAALFISTVLSKVLQLPNVKLFNATCVE-------------DLVTRPPTE- 180 (326)
T ss_dssp -----SS-----------------EEEESCHHHHHHHHHHHHHTSTTEEEETTEEEE-------------EEEEESSCS-
T ss_pred -----Cc-----------------ceecceeEEEEcchhhhccccccceeecccccc-------------eeeccCCcc-
Confidence 01 13344555666777777777777641 111000 001111111
Q ss_pred CCHHHHhhcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcE
Q 011476 215 LSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGID 294 (485)
Q Consensus 215 ~~~~~~~~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~ 294 (485)
..+++++|||+|.++++.|..+..+ +.+++++.+.......... .. ..
T Consensus 181 ------~~~~~v~viggg~~av~~a~~~~~~--------------~~~v~i~~~~~~~~~~~~~----------~~-~~- 228 (326)
T 3fpz_A 181 ------KGEVTVAGVVTNWTLVTQAHGTQCA--------------MDPNVIELAGYKNDGTRDL----------SQ-KH- 228 (326)
T ss_dssp ------SSSCEEEEEEEEEHHHHTCTTSSSC--------------CCCEEEEESCBCTTSSBCT----------TS-CC-
T ss_pred ------cCCCEEEEEccCceeeehhhhhhhc--------------cCcEEEEeecccccccccc----------ee-ec-
Confidence 3457999999999999999887765 5788888777654221100 00 00
Q ss_pred EEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCCCCCCceeeCCCccccCCCCeEEeccc
Q 011476 295 VKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGDC 374 (485)
Q Consensus 295 v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~~~~g~i~vd~~l~t~~~~~Vya~GD~ 374 (485)
..+....+...... ..+....+++|.++.+.|. .+....+.+ +.|.+|..++| +.|+|||+||+
T Consensus 229 ----~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~g~--~~~~~~~~e-------~~iv~~~~~~t-~vpGv~aaGDa 292 (326)
T 3fpz_A 229 ----GVILSTTGHDGPFG--AFCAKRIVDIDQNQKLGGM--KGLDMNHAE-------HDVVIHSGAYA-GVDNMYFAGME 292 (326)
T ss_dssp ----CEEEECCCSCSSSC--SHHHHHHHHHCTTCCCCCC--CCBCHHHHH-------HHHHHHCEECT-TSBTEEECTHH
T ss_pred ----ceEEEEecceeeEe--ecceeEEEecCceeeecce--ecccccccC-------CeEEECCCeEE-CCCCEEEEchH
Confidence 01111111110000 0011123567777777884 443323322 45777888887 99999999998
Q ss_pred cC
Q 011476 375 AT 376 (485)
Q Consensus 375 ~~ 376 (485)
+.
T Consensus 293 a~ 294 (326)
T 3fpz_A 293 VA 294 (326)
T ss_dssp HH
T ss_pred hc
Confidence 75
No 97
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.46 E-value=2.3e-14 Score=143.50 Aligned_cols=108 Identities=17% Similarity=0.207 Sum_probs=72.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCccc--------CCCccc-------ccc------------------
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF--------TPLLPS-------VTC------------------ 104 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~--------~~~~~~-------~~~------------------ 104 (485)
.+||+|||||++|+++|+.|++.|.+|+|+|+.+..+. ...+.. +..
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 47999999999999999999999999999999876532 110000 000
Q ss_pred ----------------Ccc----cccccccchHHHHhhCCCeEEEEEeEEEEEecC----CCEEEEecCCccCCCCCceE
Q 011476 105 ----------------GTV----EARSIVEPVRNIVRKKNVDICFWEAECFKIDAE----NKKVYCRSSQNTNLNGKEEF 160 (485)
Q Consensus 105 ----------------~~~----~~~~~~~~~~~~~~~~gv~v~~~~~~v~~id~~----~~~v~~~~~~~~~~~~~~~~ 160 (485)
+.. ...++...+.+.+++.|+++ +.++.|+.+..+ .+.+.+.... +
T Consensus 84 ~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i-~~~~~v~~i~~~~~g~~~~~~v~~~~------g--- 153 (401)
T 2gqf_A 84 ISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKI-LLRSEVSQVERIQNDEKVRFVLQVNS------T--- 153 (401)
T ss_dssp HHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEE-ECSCCEEEEEECCSCSSCCEEEEETT------E---
T ss_pred HHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEE-EeCCEEEEEEcccCcCCCeEEEEECC------C---
Confidence 000 11223334566667778887 357788888754 3435444321 1
Q ss_pred EeecCEEEEccCCCC
Q 011476 161 CMDYDYLVIAMGARA 175 (485)
Q Consensus 161 ~~~yd~lviAtG~~~ 175 (485)
.+.+|+||+|||+.+
T Consensus 154 ~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 154 QWQCKNLIVATGGLS 168 (401)
T ss_dssp EEEESEEEECCCCSS
T ss_pred EEECCEEEECCCCcc
Confidence 789999999999987
No 98
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.40 E-value=4.2e-12 Score=117.33 Aligned_cols=92 Identities=20% Similarity=0.143 Sum_probs=70.9
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcc-----------------ccccc-------cHHH
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH-----------------ILNMF-------DKRI 280 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~-----------------~l~~~-------~~~~ 280 (485)
+|+|||||++|+++|..|++. |.+|+++++... ++..+ ...+
T Consensus 5 dVvVVGgG~aGl~aA~~la~~--------------g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~ 70 (232)
T 2cul_A 5 QVLIVGAGFSGAETAFWLAQK--------------GVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAF 70 (232)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHH
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHH
Confidence 799999999999999999996 689999998731 11112 1366
Q ss_pred HHHHHHHHHhC-CcEEEcCceEEEEe--CCcEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 281 TAFAEEKFSRD-GIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 281 ~~~~~~~l~~~-gV~v~~~~~v~~v~--~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
...+.+.+++. ||+++ +++|+++. ++.+..+...+|++ +.+|.||+|+|.
T Consensus 71 ~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~--i~a~~VV~A~G~ 123 (232)
T 2cul_A 71 HARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPP--ARGEKVVLAVGS 123 (232)
T ss_dssp HHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCC--EECSEEEECCTT
T ss_pred HHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCE--EECCEEEECCCC
Confidence 67888888887 99999 56899886 34444444466764 999999999996
No 99
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.20 E-value=4.1e-11 Score=121.18 Aligned_cols=93 Identities=12% Similarity=0.138 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCCC------CCcchHHH-HHHhCC-
Q 011476 279 RITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIA------PHAIIKDF-MKQVGQ- 348 (485)
Q Consensus 279 ~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~------~~p~~~~l-~~~~g~- 348 (485)
.+...+...+++.| +|++++.|++|+. +++.+.. .+|+. +.+|.||+|+|.. ..|++..+ .+.++.
T Consensus 205 g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~-~~g~~--~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~ 280 (431)
T 3k7m_X 205 GSADLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTV-KDGHA--FQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEG 280 (431)
T ss_dssp CTHHHHHHHHTTCS-CEESSCCEEEEECSSSSEEEEE-TTSCC--EEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHC
T ss_pred cHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEE-CCCCE--EEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhC
Confidence 34556666677778 9999999999964 4566554 56764 8999999999921 13444333 233332
Q ss_pred CCCCceeeCCCccccCCCCeEEeccccC
Q 011476 349 TNRRALATDEWLRVEGSDSIYALGDCAT 376 (485)
Q Consensus 349 ~~~g~i~vd~~l~t~~~~~Vya~GD~~~ 376 (485)
.....++|+..+++ +.++||+.||+..
T Consensus 281 ~~~~~~kv~~~~~~-~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 281 HGGQGLKILIHVRG-AEAGIECVGDGIF 307 (431)
T ss_dssp CCCCEEEEEEEEES-CCTTEEEEBSSSS
T ss_pred CCcceEEEEEEECC-CCcCceEcCCCCE
Confidence 33456899999997 7899999999854
No 100
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.08 E-value=1.5e-10 Score=120.70 Aligned_cols=115 Identities=14% Similarity=0.191 Sum_probs=75.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC-CcccCCCccccc--------------cCc----------------
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN-YFAFTPLLPSVT--------------CGT---------------- 106 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~-~~~~~~~~~~~~--------------~~~---------------- 106 (485)
.+||+|||||+||++||..|++.|.+|+|||+.. .++..++.+... .+.
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~ 107 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILN 107 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhh
Confidence 5799999999999999999999999999999874 333222211100 000
Q ss_pred -------------ccccccccchHHHHhh-CCCeEEEEEeEEEEEecCCCE---EEEecCCccCCCCCceEEeecCEEEE
Q 011476 107 -------------VEARSIVEPVRNIVRK-KNVDICFWEAECFKIDAENKK---VYCRSSQNTNLNGKEEFCMDYDYLVI 169 (485)
Q Consensus 107 -------------~~~~~~~~~~~~~~~~-~gv~v~~~~~~v~~id~~~~~---v~~~~~~~~~~~~~~~~~~~yd~lvi 169 (485)
.+...+...+.+.+++ .|++ +++++|.++..+++. |.+.+| ..+.+|.||+
T Consensus 108 ~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~--I~~~~V~~L~~e~g~V~GV~t~dG----------~~I~Ad~VVL 175 (651)
T 3ces_A 108 ASKGPAVRATRAQADRVLYRQAVRTALENQPNLM--IFQQAVEDLIVENDRVVGAVTQMG----------LKFRAKAVVL 175 (651)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEE--EEECCEEEEEESSSBEEEEEETTS----------EEEEEEEEEE
T ss_pred cccCcccccchhhCCHHHHHHHHHHHHHhCCCCE--EEEEEEEEEEecCCEEEEEEECCC----------CEEECCEEEE
Confidence 0000122234555665 5766 467889998765543 333332 2799999999
Q ss_pred ccCCCCCCCCCCCCC
Q 011476 170 AMGARANTFNTPGVE 184 (485)
Q Consensus 170 AtG~~~~~~~i~G~~ 184 (485)
|||+.+..+.++|..
T Consensus 176 ATGt~s~~~~i~G~~ 190 (651)
T 3ces_A 176 TVGTFLDGKIHIGLD 190 (651)
T ss_dssp CCSTTTCCEEECC--
T ss_pred cCCCCccCccccCcc
Confidence 999998877777753
No 101
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.06 E-value=1.8e-10 Score=101.74 Aligned_cols=107 Identities=11% Similarity=0.082 Sum_probs=75.3
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccC-CCc---cccccCcccccccccchHHHHhhCCCeEEEEEeEE
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT-PLL---PSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v 134 (485)
++|+|||||++|+++|..|++.|.+|+|+|+.+..... ..+ +.++ ......++...+.+.+++.|+++. .. ++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~gv~v~-~~-~v 78 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLL-DEPSGEELLRRLEAHARRYGAEVR-PG-VV 78 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCT-TCCCHHHHHHHHHHHHHHTTCEEE-EC-CC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCc-CCCCHHHHHHHHHHHHHHcCCEEE-eC-EE
Confidence 68999999999999999999999999999988643211 001 1110 112234566677888888998863 44 88
Q ss_pred EEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCC
Q 011476 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (485)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~ 177 (485)
..++.+++.+.+... ++ .+.+|.||+|+|..|+.
T Consensus 79 ~~i~~~~~~~~v~~~------~g---~i~ad~vI~A~G~~~~~ 112 (180)
T 2ywl_A 79 KGVRDMGGVFEVETE------EG---VEKAERLLLCTHKDPTL 112 (180)
T ss_dssp CEEEECSSSEEEECS------SC---EEEEEEEEECCTTCCHH
T ss_pred EEEEEcCCEEEEEEC------CC---EEEECEEEECCCCCCCc
Confidence 888775544444332 11 78999999999999843
No 102
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.98 E-value=6.7e-10 Score=102.41 Aligned_cols=114 Identities=15% Similarity=0.212 Sum_probs=75.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCcccccc---Ccc----------cccccccchHHHHhhC-
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTC---GTV----------EARSIVEPVRNIVRKK- 123 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~---~~~----------~~~~~~~~~~~~~~~~- 123 (485)
.++|+|||||++|+++|..|++.|.+|+|||+.....+.++.+.... ..+ +...+...+.+.+++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~ 82 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLR 82 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCC
Confidence 47999999999999999999999999999998732222222221100 000 1113334456667776
Q ss_pred CCeEEEEEeEEEEEecCCCE---EEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCCCC
Q 011476 124 NVDICFWEAECFKIDAENKK---VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGV 183 (485)
Q Consensus 124 gv~v~~~~~~v~~id~~~~~---v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~G~ 183 (485)
++++ .+++|+++..+++. +.+.++. .+.+|.||+|+|...+....+|.
T Consensus 83 gv~i--~~~~v~~i~~~~~~v~~v~~~~g~----------~i~a~~VV~A~G~~s~~~~~~G~ 133 (232)
T 2cul_A 83 PLHL--FQATATGLLLEGNRVVGVRTWEGP----------PARGEKVVLAVGSFLGARLFLGG 133 (232)
T ss_dssp TEEE--EECCEEEEEEETTEEEEEEETTSC----------CEECSEEEECCTTCSSCEEEETT
T ss_pred CcEE--EEeEEEEEEEeCCEEEEEEECCCC----------EEECCEEEECCCCChhhceecCC
Confidence 8664 46789998766554 3333332 78999999999997765444554
No 103
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.96 E-value=3.3e-09 Score=100.95 Aligned_cols=136 Identities=17% Similarity=0.162 Sum_probs=89.7
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccccc-----------------------------
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM----------------------------- 275 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~----------------------------- 275 (485)
+|+|||||++|+.+|..|++. +|.+|+|+++.+.+...
T Consensus 41 dVvIIGgG~aGl~aA~~la~~-------------~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~ 107 (284)
T 1rp0_A 41 DVVVVGAGSAGLSAAYEISKN-------------PNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYD 107 (284)
T ss_dssp EEEEECCSHHHHHHHHHHHTS-------------TTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCE
T ss_pred CEEEECccHHHHHHHHHHHHc-------------CCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcc
Confidence 799999999999999999974 26899999998754210
Q ss_pred ---------ccHHHHHHHHHHHHh-CCcEEEcCceEEEEeC--CcEEEEEc-------C--C---CeEEEEecCeEEEcc
Q 011476 276 ---------FDKRITAFAEEKFSR-DGIDVKLGSMVVKVTD--KEIFTKVR-------G--N---GETSSMPYGMVVWST 331 (485)
Q Consensus 276 ---------~~~~~~~~~~~~l~~-~gV~v~~~~~v~~v~~--~~v~~~~~-------~--~---G~~~~i~~D~vi~a~ 331 (485)
...++...+.+.+.+ .||++++++.|+++.. +.+..+.. . + |+..++.+|.||+|+
T Consensus 108 ~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~At 187 (284)
T 1rp0_A 108 EQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSC 187 (284)
T ss_dssp ECSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECC
T ss_pred cCCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECC
Confidence 123444556666655 6999999999999963 43422221 1 2 333469999999999
Q ss_pred CCCCCcchH----HHHHHhC----CCCCCceeeCC-------CccccCCCCeEEeccccC
Q 011476 332 GIAPHAIIK----DFMKQVG----QTNRRALATDE-------WLRVEGSDSIYALGDCAT 376 (485)
Q Consensus 332 G~~~~p~~~----~l~~~~g----~~~~g~i~vd~-------~l~t~~~~~Vya~GD~~~ 376 (485)
| ..+++. .++..++ +....++.++. +.++ +.|++|++||++.
T Consensus 188 G--~~s~~~~~~~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~-~~p~i~a~G~~~~ 244 (284)
T 1rp0_A 188 G--HDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTRE-VVPGMIVTGMEVA 244 (284)
T ss_dssp C--SSSTTTTHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEE-EETTEEECTHHHH
T ss_pred C--CchHHHHHHHHHhhhccCCCCcCCcCCchhhhhhHHHhhcccc-ccCCEEEEeeehh
Confidence 9 444432 3333333 22233344432 3344 6799999999864
No 104
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.95 E-value=6.1e-10 Score=115.62 Aligned_cols=115 Identities=17% Similarity=0.169 Sum_probs=77.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC-CcccCCCccccc--------------cCc----------------
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN-YFAFTPLLPSVT--------------CGT---------------- 106 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~-~~~~~~~~~~~~--------------~~~---------------- 106 (485)
.+||+|||||+||++||..|++.|.+|+|||+.. .++..++.+... .+.
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~ 106 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLN 106 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeecc
Confidence 5899999999999999999999999999999874 333322211100 000
Q ss_pred -------------ccccccccchHHHHhh-CCCeEEEEEeEEEEEecCCCE---EEEecCCccCCCCCceEEeecCEEEE
Q 011476 107 -------------VEARSIVEPVRNIVRK-KNVDICFWEAECFKIDAENKK---VYCRSSQNTNLNGKEEFCMDYDYLVI 169 (485)
Q Consensus 107 -------------~~~~~~~~~~~~~~~~-~gv~v~~~~~~v~~id~~~~~---v~~~~~~~~~~~~~~~~~~~yd~lvi 169 (485)
.+...+...+.+.+++ .|++ ++++.|+++..+++. |.+.+|. .+.+|.||+
T Consensus 107 ~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVe--I~~~~Vt~L~~e~g~V~GV~t~dG~----------~i~AdaVVL 174 (637)
T 2zxi_A 107 TRKGKAVQSPRAQADKKRYREYMKKVCENQENLY--IKQEEVVDIIVKNNQVVGVRTNLGV----------EYKTKAVVV 174 (637)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEE--EEESCEEEEEESSSBEEEEEETTSC----------EEECSEEEE
T ss_pred cccCccccchhhhCCHHHHHHHHHHHHHhCCCCE--EEEeEEEEEEecCCEEEEEEECCCc----------EEEeCEEEE
Confidence 0001122334555665 4766 467889998765553 3443332 899999999
Q ss_pred ccCCCCCCCCCCCCC
Q 011476 170 AMGARANTFNTPGVE 184 (485)
Q Consensus 170 AtG~~~~~~~i~G~~ 184 (485)
|||+.++.+.++|..
T Consensus 175 ATG~~s~~~~~~G~~ 189 (637)
T 2zxi_A 175 TTGTFLNGVIYIGDK 189 (637)
T ss_dssp CCTTCBTCEEEETTE
T ss_pred ccCCCccCceeccce
Confidence 999998887777753
No 105
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.88 E-value=8.4e-10 Score=114.95 Aligned_cols=115 Identities=20% Similarity=0.276 Sum_probs=75.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC-CcccCCCcccc--------------ccCc---------------
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN-YFAFTPLLPSV--------------TCGT--------------- 106 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~-~~~~~~~~~~~--------------~~~~--------------- 106 (485)
..+||+|||||+||++||..|++.|.+|+|||+.. .++..++.+.. ..+.
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 45899999999999999999999999999999874 33332221110 0000
Q ss_pred --------------ccccccccchHHHHhhC-CCeEEEEEeEEEEEecCCCEEE---EecCCccCCCCCceEEeecCEEE
Q 011476 107 --------------VEARSIVEPVRNIVRKK-NVDICFWEAECFKIDAENKKVY---CRSSQNTNLNGKEEFCMDYDYLV 168 (485)
Q Consensus 107 --------------~~~~~~~~~~~~~~~~~-gv~v~~~~~~v~~id~~~~~v~---~~~~~~~~~~~~~~~~~~yd~lv 168 (485)
.+...+...+.+.+++. |++ ++++.|.++..+++.+. +.+|. .+.+|.||
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~--I~~~~V~~L~~d~g~V~GV~t~~G~----------~i~Ad~VV 167 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNID--LLQDTVIGVSANSGKFSSVTVRSGR----------AIQAKAAI 167 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEE--EEECCEEEEEEETTEEEEEEETTSC----------EEEEEEEE
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCCE--EEeeEEEEEEecCCEEEEEEECCCc----------EEEeCEEE
Confidence 00011223345556653 765 46778988876655543 33332 89999999
Q ss_pred EccCCCCCCCCCCCC
Q 011476 169 IAMGARANTFNTPGV 183 (485)
Q Consensus 169 iAtG~~~~~~~i~G~ 183 (485)
+|||+.++.+.++|.
T Consensus 168 LATG~~s~~~i~~G~ 182 (641)
T 3cp8_A 168 LACGTFLNGLIHIGM 182 (641)
T ss_dssp ECCTTCBTCEEEETT
T ss_pred ECcCCCCCccceeee
Confidence 999998875544443
No 106
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.85 E-value=9.2e-09 Score=97.82 Aligned_cols=119 Identities=17% Similarity=0.165 Sum_probs=71.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC-CCcEEEEcCCCCcccCCCcc-----cc---------------c---cCcc----cc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNP-SYDVQVISPRNYFAFTPLLP-----SV---------------T---CGTV----EA 109 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~-g~~V~lie~~~~~~~~~~~~-----~~---------------~---~~~~----~~ 109 (485)
.+||+|||||++|+++|..|++. |.+|+|||+.+..++..... .. . .+.. ..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 46999999999999999999986 99999999987765321100 00 0 0000 11
Q ss_pred cccccchHHHHhh-CCCeEEEEEeEEEEEecCCCEE---EEecC----CccCCCCCceEEeecCEEEEccCCCCCC
Q 011476 110 RSIVEPVRNIVRK-KNVDICFWEAECFKIDAENKKV---YCRSS----QNTNLNGKEEFCMDYDYLVIAMGARANT 177 (485)
Q Consensus 110 ~~~~~~~~~~~~~-~gv~v~~~~~~v~~id~~~~~v---~~~~~----~~~~~~~~~~~~~~yd~lviAtG~~~~~ 177 (485)
.++...+.+.+.+ .|+++ +.+++|.++..+++.+ .+.+. .......++...+.+|.||+|+|..+..
T Consensus 119 ~~~~~~l~~~~~~~~gv~i-~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~ 193 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKL-FNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPF 193 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEE-EETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTT
T ss_pred HHHHHHHHHHHHhcCCCEE-EcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHH
Confidence 1222233344433 68776 4567898887665543 33210 0000001123489999999999987653
No 107
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.85 E-value=2e-09 Score=107.98 Aligned_cols=109 Identities=19% Similarity=0.217 Sum_probs=73.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCC--------C-------cccccc-----------------
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP--------L-------LPSVTC----------------- 104 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~--------~-------~~~~~~----------------- 104 (485)
..+||+|||||+||+++|+.|++.|++|+|+|+.+..+... . ...+..
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQD 105 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHH
Confidence 45799999999999999999999999999999987654311 0 000000
Q ss_pred -----------------Cc----ccccccccchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEee
Q 011476 105 -----------------GT----VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMD 163 (485)
Q Consensus 105 -----------------~~----~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~ 163 (485)
+. ....++...+.+.+++.|++++ .+++|..+..++..+.+.... + .+.
T Consensus 106 ~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~-~~~~V~~i~~~~~~~~V~~~~------g---~i~ 175 (417)
T 3v76_A 106 FVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLR-LETSIGEVERTASGFRVTTSA------G---TVD 175 (417)
T ss_dssp HHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEE-CSCCEEEEEEETTEEEEEETT------E---EEE
T ss_pred HHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEE-ECCEEEEEEEeCCEEEEEECC------c---EEE
Confidence 00 0011233345566667788873 578898887766666655432 1 799
Q ss_pred cCEEEEccCCCC
Q 011476 164 YDYLVIAMGARA 175 (485)
Q Consensus 164 yd~lviAtG~~~ 175 (485)
+|+||+|+|..+
T Consensus 176 ad~VIlAtG~~S 187 (417)
T 3v76_A 176 AASLVVASGGKS 187 (417)
T ss_dssp ESEEEECCCCSS
T ss_pred eeEEEECCCCcc
Confidence 999999999875
No 108
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.85 E-value=3.1e-09 Score=109.52 Aligned_cols=53 Identities=15% Similarity=0.076 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEe--CCcEEEEEcCCCeEEEEecCeEEEccC
Q 011476 278 KRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTG 332 (485)
Q Consensus 278 ~~~~~~~~~~l~~~gV~v~~~~~v~~v~--~~~v~~~~~~~G~~~~i~~D~vi~a~G 332 (485)
..+.+.+.+.+++.|++|++++.|++|. +++++.+.+.+|++ +.+|.||++++
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~--~~ad~VV~~a~ 275 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRR--FLTQAVASNAD 275 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCE--EECSCEEECCC
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcE--EEcCEEEECCC
Confidence 4677888899999999999999999985 56677777788886 99999999987
No 109
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.83 E-value=4.6e-09 Score=104.26 Aligned_cols=106 Identities=19% Similarity=0.261 Sum_probs=72.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCC----cc-------------ccc-------------cC--
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LP-------------SVT-------------CG-- 105 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~----~~-------------~~~-------------~~-- 105 (485)
.++|+|||||++|+++|..|++.|++|+|||+.+....... .+ .+. .+
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 57999999999999999999999999999998876532110 00 000 00
Q ss_pred ------------cccccccccchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCC
Q 011476 106 ------------TVEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGA 173 (485)
Q Consensus 106 ------------~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~ 173 (485)
......+...+.+.+.+.|++++ .+.+|+.++.++ .+++.++. .+.+|.||.|+|.
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~-~~~~v~~i~~~~-~v~~~~g~----------~~~ad~vV~AdG~ 158 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDIS-VNSEAVAADPVG-RLTLQTGE----------VLEADLIVGADGV 158 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEE-SSCCEEEEETTT-EEEETTSC----------EEECSEEEECCCT
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEE-eCCEEEEEEeCC-EEEECCCC----------EEEcCEEEECCCc
Confidence 00011223335566667788773 567788888744 66665543 7999999999998
Q ss_pred CC
Q 011476 174 RA 175 (485)
Q Consensus 174 ~~ 175 (485)
..
T Consensus 159 ~s 160 (379)
T 3alj_A 159 GS 160 (379)
T ss_dssp TC
T ss_pred cH
Confidence 75
No 110
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.82 E-value=6.3e-09 Score=107.45 Aligned_cols=110 Identities=15% Similarity=0.185 Sum_probs=74.4
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcc--------------------------cCCCc------cccc
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA--------------------------FTPLL------PSVT 103 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~--------------------------~~~~~------~~~~ 103 (485)
...+||+|||||++|+++|+.|++.|++|+|||+.+..+ +...+ ....
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~ 184 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK 184 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEec
Confidence 445899999999999999999999999999999886431 00000 0000
Q ss_pred c---------------C--------------cccccccccchHHHHhhCCCeEEEEEeEEEEEecCCCE---EEEecCCc
Q 011476 104 C---------------G--------------TVEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKK---VYCRSSQN 151 (485)
Q Consensus 104 ~---------------~--------------~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~---v~~~~~~~ 151 (485)
. + ......+...+.+.+.+.|++++ .+++|+++..++.. |.+.++.
T Consensus 185 ~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~-~~t~V~~I~~~~~~v~gV~l~~G~- 262 (549)
T 3nlc_A 185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIR-FSTRVDDLHMEDGQITGVTLSNGE- 262 (549)
T ss_dssp CTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEE-SSCCEEEEEESSSBEEEEEETTSC-
T ss_pred cccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEE-eCCEEEEEEEeCCEEEEEEECCCC-
Confidence 0 0 00012233446666777898874 67789988776553 4444433
Q ss_pred cCCCCCceEEeecCEEEEccCCCCC
Q 011476 152 TNLNGKEEFCMDYDYLVIAMGARAN 176 (485)
Q Consensus 152 ~~~~~~~~~~~~yd~lviAtG~~~~ 176 (485)
.+.+|.||+|+|..++
T Consensus 263 ---------~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 263 ---------EIKSRHVVLAVGHSAR 278 (549)
T ss_dssp ---------EEECSCEEECCCTTCH
T ss_pred ---------EEECCEEEECCCCChh
Confidence 7999999999999874
No 111
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.81 E-value=4.4e-09 Score=108.16 Aligned_cols=120 Identities=16% Similarity=0.213 Sum_probs=78.2
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCC---ccc-------cc----cC--------cccccccc
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL---LPS-------VT----CG--------TVEARSIV 113 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~---~~~-------~~----~~--------~~~~~~~~ 113 (485)
...++|+|||||++|+++|..|++.|++|+|||+.+.++.... .+. .. .+ .....++.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~ 169 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQ 169 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHH
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHH
Confidence 4568999999999999999999999999999999877653211 110 00 00 01112334
Q ss_pred cchHHHHhhCCCeEEEEEeEEEEEecC---C--CEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCCC
Q 011476 114 EPVRNIVRKKNVDICFWEAECFKIDAE---N--KKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTP 181 (485)
Q Consensus 114 ~~~~~~~~~~gv~v~~~~~~v~~id~~---~--~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~ 181 (485)
..+.+.+++.|+++ +.+++|+++..+ + -.+.+.+.. +++...+.+|+||+|+|+.+......
T Consensus 170 ~~L~~~~~~~gv~v-~~~~~v~~i~~~~~~~~~~~v~~~~~~-----~g~~~~i~ad~VV~A~G~~S~~r~~~ 236 (497)
T 2bry_A 170 LLLLKVALLLGVEI-HWGVKFTGLQPPPRKGSGWRAQLQPNP-----PAQLASYEFDVLISAAGGKFVPEGFT 236 (497)
T ss_dssp HHHHHHHHHTTCEE-EESCEEEEEECCCSTTCCBEEEEESCC-----CHHHHTCCBSEEEECCCTTCCCTTCE
T ss_pred HHHHHHHHhCCCEE-EeCCEEEEEEEecCCCCEEEEEEEECC-----CCCEEEEEcCEEEECCCCCccccccc
Confidence 44566677788887 467889988763 1 245553210 11112689999999999987654443
No 112
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.80 E-value=9.8e-10 Score=113.03 Aligned_cols=150 Identities=11% Similarity=0.148 Sum_probs=98.9
Q ss_pred ecCEEEEccCCCCCCCCCCCCC-CccccccChhHHHHHH-HHHHHHHhhcCCCCCCHHHHhhcccEEEECCChhHHHHHH
Q 011476 163 DYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIR-RNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAA 240 (485)
Q Consensus 163 ~yd~lviAtG~~~~~~~i~G~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~g~e~A~ 240 (485)
.||++++++|++|+.+++++.+ +.+...+...+..++. ..+. ...+. ........+|+|||||++|+.+|.
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~dVvIVGgG~aGl~aA~ 109 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRAS----QPVYQ---QGQACTNTKCLVVGAGPCGLRAAV 109 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHT----SGGGG---GGTTTTTCEEEEECCSHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhc----ccccc---CccccCCCCEEEECccHHHHHHHH
Confidence 4788999999998777666643 3444444544443331 1110 00000 000123458999999999999999
Q ss_pred HHHHhhHHHHHhhCcCCCCCceEEEEecCcccccc-----cc----------------------------HHHHHHHHHH
Q 011476 241 ELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-----FD----------------------------KRITAFAEEK 287 (485)
Q Consensus 241 ~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~-----~~----------------------------~~~~~~~~~~ 287 (485)
.|++. |.+|+|+++.+.+... .+ .++...+.+.
T Consensus 110 ~La~~--------------G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 175 (497)
T 2bry_A 110 ELALL--------------GARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKV 175 (497)
T ss_dssp HHHHT--------------TCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHH
T ss_pred HHHHC--------------CCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHH
Confidence 99986 7899999988654210 01 4566677888
Q ss_pred HHhCCcEEEcCceEEEEeC-----CcEEEEEc-C-CCeEEEEecCeEEEccCC
Q 011476 288 FSRDGIDVKLGSMVVKVTD-----KEIFTKVR-G-NGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 288 l~~~gV~v~~~~~v~~v~~-----~~v~~~~~-~-~G~~~~i~~D~vi~a~G~ 333 (485)
+++.||++++++.|+++.. +.+.+... . +|+..++.+|.||.|+|.
T Consensus 176 ~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~ 228 (497)
T 2bry_A 176 ALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGG 228 (497)
T ss_dssp HHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCT
T ss_pred HHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCC
Confidence 8889999999999999974 22333321 2 553234899999999995
No 113
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.78 E-value=1.6e-07 Score=92.34 Aligned_cols=67 Identities=9% Similarity=0.180 Sum_probs=50.3
Q ss_pred cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--Cc-EEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHh-CC
Q 011476 277 DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KE-IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV-GQ 348 (485)
Q Consensus 277 ~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~-v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~-g~ 348 (485)
+..+...+.+.+++.|++++++++|+++.. ++ +.+. ..+|+..++.+|.||+|+|. ....|++.+ |+
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~-~~~g~~~~~~a~~VV~A~G~----~s~~l~~~~~g~ 219 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELD-FGGAEPMTLSCRVLINAAGL----HAPGLARRIEGI 219 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEE-ECTTSCEEEEEEEEEECCGG----GHHHHHHTEETS
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEE-ECCCceeEEEeCEEEECCCc----chHHHHHHhcCC
Confidence 356778888999999999999999999964 34 5544 35675445999999999993 344666666 54
No 114
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.75 E-value=2.9e-07 Score=91.82 Aligned_cols=77 Identities=14% Similarity=0.113 Sum_probs=51.9
Q ss_pred EEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCCCCCcchH
Q 011476 263 ITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIK 340 (485)
Q Consensus 263 Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~ 340 (485)
-.++......+. +..+...+.+.+++.|++++++++|+++.. +++..+...+| . +.+|.||+|+|. . ..
T Consensus 161 ~~~~~~~~~~~~--~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~--~~a~~vV~a~G~--~--s~ 231 (405)
T 2gag_B 161 GATWQPRAGIAK--HDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-T--IHAGKVALAGAG--H--SS 231 (405)
T ss_dssp EEEEETTCBBCC--HHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-C--EEEEEEEECCGG--G--HH
T ss_pred eEEEeCCCccCC--HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-e--EECCEEEECCch--h--HH
Confidence 344444443322 346778888889999999999999999963 44444444566 3 899999999993 2 22
Q ss_pred HHHHHhCC
Q 011476 341 DFMKQVGQ 348 (485)
Q Consensus 341 ~l~~~~g~ 348 (485)
.+.+.+++
T Consensus 232 ~l~~~~g~ 239 (405)
T 2gag_B 232 VLAEMAGF 239 (405)
T ss_dssp HHHHHHTC
T ss_pred HHHHHcCC
Confidence 45555554
No 115
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.73 E-value=3.4e-07 Score=92.00 Aligned_cols=52 Identities=19% Similarity=0.222 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEe--CCcEEEEEcCCCeEEEEecCeEEEccC
Q 011476 278 KRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTG 332 (485)
Q Consensus 278 ~~~~~~~~~~l~~~gV~v~~~~~v~~v~--~~~v~~~~~~~G~~~~i~~D~vi~a~G 332 (485)
..+.+.+.+.+++.|++|++++.|++|. +++++.+.. +|+. +.+|.||+|+|
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~--~~ad~VV~a~~ 249 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRI--HDADLVISNLG 249 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEE--EECSEEEECSC
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEE--EECCEEEECCC
Confidence 4678888899999999999999999996 345653443 4654 89999999998
No 116
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.73 E-value=6.4e-09 Score=104.72 Aligned_cols=51 Identities=14% Similarity=0.165 Sum_probs=42.2
Q ss_pred cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccC
Q 011476 277 DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTG 332 (485)
Q Consensus 277 ~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G 332 (485)
...+.+.+.+.+++.|++|++++.|++|.. +++ +. .+|+. +.+|.||+|+|
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v--V~-~~g~~--~~ad~Vv~a~~ 240 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEEKKV--YT-RDNEE--YSFDVAISNVG 240 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE--EE-TTCCE--EECSEEEECSC
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE--EE-eCCcE--EEeCEEEECCC
Confidence 357788889999999999999999999974 345 33 45654 89999999999
No 117
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.71 E-value=1.1e-08 Score=103.79 Aligned_cols=111 Identities=18% Similarity=0.194 Sum_probs=71.5
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccC--------CCcc------c----ccc-------------
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT--------PLLP------S----VTC------------- 104 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~--------~~~~------~----~~~------------- 104 (485)
.+.+||+|||||++|+++|+.|++.|.+|+|+|+.+..+.. ..+. . +..
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFN 103 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcC
Confidence 34579999999999999999999999999999988754321 0000 0 000
Q ss_pred --------------------Cccc-----ccccccchHHHHhhCCCeEEEEEeEEEEEecCCCE-EEEecCCccCCCCCc
Q 011476 105 --------------------GTVE-----ARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKK-VYCRSSQNTNLNGKE 158 (485)
Q Consensus 105 --------------------~~~~-----~~~~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~-v~~~~~~~~~~~~~~ 158 (485)
+... ...+...+.+.+++.|+++ +.+++|+++..+++. +.+... ++
T Consensus 104 ~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i-~~~~~V~~i~~~~~~v~~V~~~------~G- 175 (447)
T 2i0z_A 104 NEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKI-RTNTPVETIEYENGQTKAVILQ------TG- 175 (447)
T ss_dssp HHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEE-ECSCCEEEEEEETTEEEEEEET------TC-
T ss_pred HHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEE-EeCcEEEEEEecCCcEEEEEEC------CC-
Confidence 0000 0122334555566788887 467888888755554 333221 11
Q ss_pred eEEeecCEEEEccCCCC
Q 011476 159 EFCMDYDYLVIAMGARA 175 (485)
Q Consensus 159 ~~~~~yd~lviAtG~~~ 175 (485)
..+.+|.||+|+|...
T Consensus 176 -~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 176 -EVLETNHVVIAVGGKS 191 (447)
T ss_dssp -CEEECSCEEECCCCSS
T ss_pred -CEEECCEEEECCCCCc
Confidence 1699999999999876
No 118
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.71 E-value=1.8e-09 Score=113.88 Aligned_cols=39 Identities=23% Similarity=0.349 Sum_probs=35.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCccc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF 95 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~ 95 (485)
..++|+|||||+||+++|+.|++.|++|+|||+.+..++
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg 83 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSG 83 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCC
Confidence 357999999999999999999999999999999887664
No 119
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.69 E-value=5.2e-07 Score=89.42 Aligned_cols=85 Identities=13% Similarity=0.149 Sum_probs=59.0
Q ss_pred hCcCCC-CCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEE
Q 011476 253 LYPKVK-DSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVW 329 (485)
Q Consensus 253 ~~p~~~-~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~ 329 (485)
.+|.+. ++..+.++......+. +..+...+.+.+++.|+++++++.|++++. +++.+.. .+| . +.+|.||+
T Consensus 126 ~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~-~~g-~--~~a~~vV~ 199 (389)
T 2gf3_A 126 RWPGITVPENYNAIFEPNSGVLF--SENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIET-ANG-S--YTADKLIV 199 (389)
T ss_dssp HSTTCCCCTTEEEEEETTCEEEE--HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEE-TTE-E--EEEEEEEE
T ss_pred hCCCcccCCCceEEEeCCCcEEe--HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEe-CCC-E--EEeCEEEE
Confidence 355443 3466788877665543 357778888999999999999999999964 3455543 444 3 89999999
Q ss_pred ccCCCCCcchHHHHHHhC
Q 011476 330 STGIAPHAIIKDFMKQVG 347 (485)
Q Consensus 330 a~G~~~~p~~~~l~~~~g 347 (485)
|+|. ....++..++
T Consensus 200 A~G~----~~~~l~~~~g 213 (389)
T 2gf3_A 200 SMGA----WNSKLLSKLN 213 (389)
T ss_dssp CCGG----GHHHHGGGGT
T ss_pred ecCc----cHHHHhhhhc
Confidence 9993 2234555544
No 120
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.61 E-value=3.1e-08 Score=98.30 Aligned_cols=37 Identities=19% Similarity=0.247 Sum_probs=34.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA 94 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~ 94 (485)
.+||+||||||||+++|+.|++.|++|+|||+.+.++
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~ 40 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIG 40 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 4799999999999999999999999999999887654
No 121
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.61 E-value=2.1e-08 Score=99.32 Aligned_cols=37 Identities=16% Similarity=0.294 Sum_probs=33.6
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCC
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~ 92 (485)
...+||+|||||++|+++|++|++.|++|+|||+...
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~ 51 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTM 51 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 4568999999999999999999999999999998753
No 122
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.60 E-value=8.2e-08 Score=100.52 Aligned_cols=38 Identities=26% Similarity=0.248 Sum_probs=35.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCccc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF 95 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~ 95 (485)
.+||||||||+||+++|+.|++.|++|+|||+.+..++
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg 163 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGG 163 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 57999999999999999999999999999999887654
No 123
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.60 E-value=4.3e-08 Score=97.86 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=33.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~ 93 (485)
.++|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 479999999999999999999999999999987654
No 124
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.59 E-value=3.1e-08 Score=97.96 Aligned_cols=38 Identities=24% Similarity=0.162 Sum_probs=33.5
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcc
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA 94 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~ 94 (485)
...++|+|||||++|+++|++|+ +|++|+|+|+.+.++
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~g 44 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQPG 44 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSSTT
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCcc
Confidence 34689999999999999999999 699999999986443
No 125
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.57 E-value=7.6e-08 Score=96.68 Aligned_cols=111 Identities=20% Similarity=0.311 Sum_probs=70.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCccc---CCCcccc-------------c-cC-------------c-
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF---TPLLPSV-------------T-CG-------------T- 106 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~---~~~~~~~-------------~-~~-------------~- 106 (485)
.+||+|||||++|+++|+.|++.|++|+|+|+.+.... ..+.+.. . .+ .
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 84 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEI 84 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCee
Confidence 47999999999999999999999999999998863221 1111110 0 00 0
Q ss_pred ------------------ccccccccchHHHHhhCCCeEEEEEeEEEEEecCCCE--EEEecCCccCCCCCceEEeecCE
Q 011476 107 ------------------VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKK--VYCRSSQNTNLNGKEEFCMDYDY 166 (485)
Q Consensus 107 ------------------~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~--v~~~~~~~~~~~~~~~~~~~yd~ 166 (485)
++...+...+.+.+.+.|+++ +..++|+++..++.. +.+.+. +++..++.+|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i-~~~~~v~~i~~~~~~~~v~v~~~------~g~~~~~~a~~ 157 (421)
T 3nix_A 85 ADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDV-EYEVGVTDIKFFGTDSVTTIEDI------NGNKREIEARF 157 (421)
T ss_dssp EEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEE-ECSEEEEEEEEETTEEEEEEEET------TSCEEEEEEEE
T ss_pred EEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEE-EcCCEEEEEEEeCCEEEEEEEcC------CCCEEEEEcCE
Confidence 000011122445555668886 356788888765443 344332 22234699999
Q ss_pred EEEccCCCC
Q 011476 167 LVIAMGARA 175 (485)
Q Consensus 167 lviAtG~~~ 175 (485)
||.|+|...
T Consensus 158 vV~A~G~~s 166 (421)
T 3nix_A 158 IIDASGYGR 166 (421)
T ss_dssp EEECCGGGC
T ss_pred EEECCCCch
Confidence 999999865
No 126
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.56 E-value=1.6e-07 Score=95.52 Aligned_cols=113 Identities=18% Similarity=0.183 Sum_probs=70.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcc--cCCCc--------cccc---------------------cCc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA--FTPLL--------PSVT---------------------CGT 106 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~--~~~~~--------~~~~---------------------~~~ 106 (485)
.++|+|||||+||+++|..|++.|++|+|+|+.+... ..+.- .... .+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 85 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQ 85 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCc
Confidence 4799999999999999999999999999999886532 11100 0000 000
Q ss_pred -----------ccccccccchHHHHhhCCCeEEEEEeEEEEEecCCCE---EEEecCCccCCCCCceEEeecCEEEEccC
Q 011476 107 -----------VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKK---VYCRSSQNTNLNGKEEFCMDYDYLVIAMG 172 (485)
Q Consensus 107 -----------~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~---v~~~~~~~~~~~~~~~~~~~yd~lviAtG 172 (485)
++...+...+.+.+.+.|+++ +.+++|+++..++.. |.+.+.. +++...+.+|.||.|+|
T Consensus 86 ~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i-~~~~~v~~i~~~~~~v~gv~~~~~~-----~G~~~~~~ad~VV~AdG 159 (453)
T 3atr_A 86 TVWTVNGEGFELNAPLYNQRVLKEAQDRGVEI-WDLTTAMKPIFEDGYVKGAVLFNRR-----TNEELTVYSKVVVEATG 159 (453)
T ss_dssp CEEEEEEEEEEECHHHHHHHHHHHHHHTTCEE-ESSEEEEEEEEETTEEEEEEEEETT-----TTEEEEEECSEEEECCG
T ss_pred eEEeECCCcEEEcHHHHHHHHHHHHHHcCCEE-EeCcEEEEEEEECCEEEEEEEEEcC-----CCceEEEEcCEEEECcC
Confidence 000011122344455578877 357788888766655 3344210 12234789999999999
Q ss_pred CCCC
Q 011476 173 ARAN 176 (485)
Q Consensus 173 ~~~~ 176 (485)
....
T Consensus 160 ~~s~ 163 (453)
T 3atr_A 160 YSRS 163 (453)
T ss_dssp GGCT
T ss_pred Cchh
Confidence 8654
No 127
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.55 E-value=9.1e-08 Score=95.78 Aligned_cols=40 Identities=23% Similarity=0.247 Sum_probs=33.6
Q ss_pred CCCCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCc
Q 011476 54 MGIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (485)
Q Consensus 54 ~~~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~ 93 (485)
...++++|+|||||++|+++|+.|++.|++|+|||+.+..
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEI 58 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 3345689999999999999999999999999999988653
No 128
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.55 E-value=9.8e-08 Score=92.70 Aligned_cols=38 Identities=21% Similarity=0.246 Sum_probs=34.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCccc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF 95 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~ 95 (485)
+++|+|||||++|+++|+.|++.|++|+|||+.+..++
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg 39 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGG 39 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcc
Confidence 46999999999999999999999999999999876543
No 129
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.55 E-value=1.4e-07 Score=100.87 Aligned_cols=37 Identities=16% Similarity=0.251 Sum_probs=33.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~ 93 (485)
..+||+|||||++|+++|+.|++.|++|+|||+.+.+
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 307 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAP 307 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 3489999999999999999999999999999986544
No 130
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.54 E-value=9.4e-08 Score=93.29 Aligned_cols=37 Identities=16% Similarity=0.184 Sum_probs=34.0
Q ss_pred CeEEEECCcHHHHHHHHhcCC---CCCcEEEEcCCCCccc
Q 011476 59 KKVVVLGTGWAGTSFLKNLNN---PSYDVQVISPRNYFAF 95 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~---~g~~V~lie~~~~~~~ 95 (485)
+||+|||||++|+++|+.|++ .|++|+|||+++..++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg 41 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGG 41 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCG
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCcc
Confidence 589999999999999999998 9999999999876655
No 131
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.54 E-value=1.1e-06 Score=88.83 Aligned_cols=54 Identities=17% Similarity=0.252 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHhCCcEEEcCc---eEEEEe--CCcEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 278 KRITAFAEEKFSRDGIDVKLGS---MVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 278 ~~~~~~~~~~l~~~gV~v~~~~---~v~~v~--~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
..+...+.+.+++.|++|++++ .|+++. ++++..+.+.+|+. +.+|.||+|+|.
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~--i~Ad~VV~AtG~ 219 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKI--WRAERTFLCAGA 219 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEE--EECSEEEECCGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCE--EECCEEEECCCC
Confidence 4677788888999999999999 999985 45566455567764 999999999994
No 132
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.53 E-value=1.2e-07 Score=93.80 Aligned_cols=35 Identities=31% Similarity=0.517 Sum_probs=32.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
..+||+|||||++|+++|++|++.|++|+|||+..
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 35799999999999999999999999999999874
No 133
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.53 E-value=1.4e-07 Score=98.63 Aligned_cols=39 Identities=18% Similarity=0.243 Sum_probs=35.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCccc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF 95 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~ 95 (485)
..+||||||||++|+++|+.|++.|++|+|||+.+..++
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg 158 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGG 158 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 456999999999999999999999999999999876654
No 134
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.51 E-value=9.6e-08 Score=95.02 Aligned_cols=112 Identities=14% Similarity=0.172 Sum_probs=70.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCC-C-------------c-cc--c------------ccCcc-
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP-L-------------L-PS--V------------TCGTV- 107 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~-~-------------~-~~--~------------~~~~~- 107 (485)
.+||+|||||++|+++|+.|++.|++|+|+|+.+..+... . + +. . ..+..
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEE
Confidence 4799999999999999999999999999999987544310 0 0 00 0 00000
Q ss_pred -c--c-------------cccccchHHHHhhCCCeEEEEEeEEEEEecCCCEEE-EecCCccCCCCCceEEeecCEEEEc
Q 011476 108 -E--A-------------RSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVY-CRSSQNTNLNGKEEFCMDYDYLVIA 170 (485)
Q Consensus 108 -~--~-------------~~~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~-~~~~~~~~~~~~~~~~~~yd~lviA 170 (485)
. . ..+...+.+.+.+.|+++ +.+++|+++..++..+. +.... .++...+.+|.||.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i-~~~~~v~~i~~~~~~v~gv~~~~-----~~~~~~~~a~~vV~A 157 (397)
T 3cgv_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADV-WVKSPALGVIKENGKVAGAKIRH-----NNEIVDVRAKMVIAA 157 (397)
T ss_dssp EEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEE-ESSCCEEEEEEETTEEEEEEEEE-----TTEEEEEEEEEEEEC
T ss_pred EEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEE-EECCEEEEEEEeCCEEEEEEEEE-----CCeEEEEEcCEEEEC
Confidence 0 0 001122344455568776 35778888877666543 32110 112248999999999
Q ss_pred cCCCC
Q 011476 171 MGARA 175 (485)
Q Consensus 171 tG~~~ 175 (485)
+|...
T Consensus 158 ~G~~s 162 (397)
T 3cgv_A 158 DGFES 162 (397)
T ss_dssp CCTTC
T ss_pred CCcch
Confidence 99864
No 135
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.51 E-value=2.1e-07 Score=96.68 Aligned_cols=37 Identities=27% Similarity=0.329 Sum_probs=33.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~ 93 (485)
..++|+|||||++|+++|+.|++.|++|+|||+.+..
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~ 40 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGL 40 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 3579999999999999999999999999999988643
No 136
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.50 E-value=2.3e-06 Score=91.47 Aligned_cols=54 Identities=13% Similarity=0.169 Sum_probs=42.2
Q ss_pred cHHHHHHHHHHHHhCCcEEEcCceEEEEe--CCcEEEEEcCCCe-EEEEecCeEEEccCC
Q 011476 277 DKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGE-TSSMPYGMVVWSTGI 333 (485)
Q Consensus 277 ~~~~~~~~~~~l~~~gV~v~~~~~v~~v~--~~~v~~~~~~~G~-~~~i~~D~vi~a~G~ 333 (485)
+..+...+.+.+++.|++++++++|+++. ++++.+.. .+|. . +.+|.||+|+|.
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t-~~G~~~--i~Ad~VVlAtG~ 467 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTF-GQSQAA--KHHATVILATGH 467 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEE-C-CCCC--EEESEEEECCGG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEe-CCCcEE--EECCEEEECCCc
Confidence 35677888888999999999999999986 34565544 4554 4 899999999995
No 137
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.49 E-value=1.4e-07 Score=95.98 Aligned_cols=103 Identities=17% Similarity=0.228 Sum_probs=77.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++++|||||++|+.+|..|++.|.+|+|+++.+.+. +. ...++...+.+.+++.|+++ +.+.++..
T Consensus 166 ~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l-----~~------~~~~~~~~l~~~l~~~Gv~i-~~~~~V~~ 233 (455)
T 2yqu_A 166 VPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL-----PT------MDLEVSRAAERVFKKQGLTI-RTGVRVTA 233 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-----TT------SCHHHHHHHHHHHHHHTCEE-ECSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc-----cc------cCHHHHHHHHHHHHHCCCEE-EECCEEEE
Confidence 35799999999999999999999999999999886532 11 11244555677788889887 35678999
Q ss_pred EecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCC
Q 011476 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (485)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~ 179 (485)
++.+++.+.+.... + ..+.+|.||+|+|.+|+...
T Consensus 234 i~~~~~~v~v~~~~-----g---~~i~~D~vv~A~G~~p~~~~ 268 (455)
T 2yqu_A 234 VVPEAKGARVELEG-----G---EVLEADRVLVAVGRRPYTEG 268 (455)
T ss_dssp EEEETTEEEEEETT-----S---CEEEESEEEECSCEEECCTT
T ss_pred EEEeCCEEEEEECC-----C---eEEEcCEEEECcCCCcCCCC
Confidence 98766655554211 1 17999999999999987653
No 138
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.49 E-value=1e-07 Score=99.43 Aligned_cols=113 Identities=16% Similarity=0.135 Sum_probs=69.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCC----Cc-------------c----------cc-ccC---
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP----LL-------------P----------SV-TCG--- 105 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~----~~-------------~----------~~-~~~--- 105 (485)
+.++|+|||||++|+++|+.|++.|++|+|||+.+...... +. . .. ..+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 127 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFT 127 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccc
Confidence 45799999999999999999999999999999875432100 00 0 00 000
Q ss_pred -ccc---------------ccccccchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEE
Q 011476 106 -TVE---------------ARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVI 169 (485)
Q Consensus 106 -~~~---------------~~~~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lvi 169 (485)
.++ ...+...+.+.+.+.|++++ ..++|+++..+...+.+.... .++ +..+.+|+||.
T Consensus 128 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~-~~~~v~~l~~~~~~v~v~~~~----~~G-~~~~~a~~vV~ 201 (570)
T 3fmw_A 128 QGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIP-RGHEVTRLRQDAEAVEVTVAG----PSG-PYPVRARYGVG 201 (570)
T ss_dssp TCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECC-BSCEEEECCBCSSCEEEEEEE----TTE-EEEEEESEEEE
T ss_pred ccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEE-eCCEEEEEEEcCCeEEEEEEe----CCC-cEEEEeCEEEE
Confidence 000 01112224455555687763 577899887766544443210 011 13899999999
Q ss_pred ccCCCC
Q 011476 170 AMGARA 175 (485)
Q Consensus 170 AtG~~~ 175 (485)
|.|.+.
T Consensus 202 ADG~~S 207 (570)
T 3fmw_A 202 CDGGRS 207 (570)
T ss_dssp CSCSSC
T ss_pred cCCCCc
Confidence 999864
No 139
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.49 E-value=9.4e-08 Score=94.27 Aligned_cols=35 Identities=14% Similarity=0.225 Sum_probs=32.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~ 92 (485)
.+||+|||||++|+++|++|++.|++|+|||+.+.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 46999999999999999999999999999998754
No 140
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.48 E-value=2.2e-07 Score=95.98 Aligned_cols=112 Identities=21% Similarity=0.285 Sum_probs=71.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccC---CCccc--------------c-------------ccCc-
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT---PLLPS--------------V-------------TCGT- 106 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~---~~~~~--------------~-------------~~~~- 106 (485)
.++|+|||||++|+++|+.|++.|++|+|||+.+..... .+.+. + ..+.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~ 86 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKE 86 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCC
Confidence 479999999999999999999999999999988632211 01110 0 0000
Q ss_pred ---------------------ccccccccchHHHHhhCCCeEEEEEeEEEEEecCCCE---EEEecCCccCCCCCceEEe
Q 011476 107 ---------------------VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKK---VYCRSSQNTNLNGKEEFCM 162 (485)
Q Consensus 107 ---------------------~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~---v~~~~~~~~~~~~~~~~~~ 162 (485)
++...+...+.+.+.+.|+++ +..++|+++..++.. +.+.+. +++...+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i-~~~~~V~~v~~~~~~v~gv~~~~~------dG~~~~i 159 (512)
T 3e1t_A 87 PEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDV-RERHEVIDVLFEGERAVGVRYRNT------EGVELMA 159 (512)
T ss_dssp SSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEE-ESSCEEEEEEEETTEEEEEEEECS------SSCEEEE
T ss_pred ccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEE-EcCCEEEEEEEECCEEEEEEEEeC------CCCEEEE
Confidence 000011122445556678876 356788888876664 444432 2223489
Q ss_pred ecCEEEEccCCCCC
Q 011476 163 DYDYLVIAMGARAN 176 (485)
Q Consensus 163 ~yd~lviAtG~~~~ 176 (485)
.+|.||.|+|....
T Consensus 160 ~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 160 HARFIVDASGNRTR 173 (512)
T ss_dssp EEEEEEECCCTTCS
T ss_pred EcCEEEECCCcchH
Confidence 99999999998753
No 141
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.48 E-value=2e-07 Score=93.04 Aligned_cols=37 Identities=30% Similarity=0.367 Sum_probs=33.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~ 93 (485)
..++|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 61 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDR 61 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSST
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCc
Confidence 3579999999999999999999999999999988643
No 142
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.47 E-value=6.6e-07 Score=92.52 Aligned_cols=70 Identities=19% Similarity=0.232 Sum_probs=49.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccC-ccc--cc---ccccchHHHHhhCCCeE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCG-TVE--AR---SIVEPVRNIVRKKNVDI 127 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~-~~~--~~---~~~~~~~~~~~~~gv~v 127 (485)
.++|+|||||++||+||+.|++.|++|+|+|+++..|+.........+ ..+ .. .....+.+++++.|++.
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~ 79 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLET 79 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCcc
Confidence 579999999999999999999999999999999999886432211101 111 00 11234567788888764
No 143
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.47 E-value=3.1e-07 Score=94.43 Aligned_cols=115 Identities=18% Similarity=0.200 Sum_probs=72.6
Q ss_pred CCCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCC-----------------Ccccccc----------Cc-
Q 011476 55 GIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP-----------------LLPSVTC----------GT- 106 (485)
Q Consensus 55 ~~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~-----------------~~~~~~~----------~~- 106 (485)
....++|+||||||+|+++|..|++.|++|+|||+.+.....+ +...+.. +.
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 87 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLP 87 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEE
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhcccccccccccee
Confidence 3557899999999999999999999999999999876532211 0000000 00
Q ss_pred cc--------c-------cccccchHHHHhhCCCeEEEEEeEEEEEecCCCEEEEecCCccCCCCCceEEeecCEEEEcc
Q 011476 107 VE--------A-------RSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAM 171 (485)
Q Consensus 107 ~~--------~-------~~~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAt 171 (485)
++ + ..+...+.+.+.+.|++++ ...+++++..+...+++.... +.+..++.+|+||.|.
T Consensus 88 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~-~~~~v~~i~~~~~~v~v~~~~-----~~g~~~~~a~~vVgAD 161 (500)
T 2qa1_A 88 IDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIR-RGHEVLSLTDDGAGVTVEVRG-----PEGKHTLRAAYLVGCD 161 (500)
T ss_dssp EEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEE-ETCEEEEEEEETTEEEEEEEE-----TTEEEEEEESEEEECC
T ss_pred cccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEE-CCcEEEEEEEcCCeEEEEEEc-----CCCCEEEEeCEEEECC
Confidence 00 0 0111123444556788874 578899887666655443211 1113479999999999
Q ss_pred CCCC
Q 011476 172 GARA 175 (485)
Q Consensus 172 G~~~ 175 (485)
|.+.
T Consensus 162 G~~S 165 (500)
T 2qa1_A 162 GGRS 165 (500)
T ss_dssp CTTC
T ss_pred Ccch
Confidence 9864
No 144
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.46 E-value=3.1e-07 Score=91.89 Aligned_cols=97 Identities=14% Similarity=0.251 Sum_probs=76.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~i 137 (485)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... ....++...+.+.+++.|+++ +.+..+..+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~GV~i-~~~~~v~~i 213 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR----------AAPATLADFVARYHAAQGVDL-RFERSVTGS 213 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------TSCHHHHHHHHHHHHHTTCEE-EESCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc----------ccCHHHHHHHHHHHHHcCcEE-EeCCEEEEE
Confidence 689999999999999999999999999999988653210 011244556777888899887 356788888
Q ss_pred ecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCC
Q 011476 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (485)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~ 177 (485)
+ ++ .+.+.++. .+.+|.||+|+|.+|+.
T Consensus 214 ~-~~-~v~~~~g~----------~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 214 V-DG-VVLLDDGT----------RIAADMVVVGIGVLAND 241 (408)
T ss_dssp E-TT-EEEETTSC----------EEECSEEEECSCEEECC
T ss_pred E-CC-EEEECCCC----------EEEcCEEEECcCCCccH
Confidence 8 43 77776554 89999999999998874
No 145
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.46 E-value=1.6e-07 Score=93.65 Aligned_cols=35 Identities=23% Similarity=0.295 Sum_probs=32.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~ 92 (485)
.+||+|||||++|+++|++|++.|++|+|+|+.+.
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 46999999999999999999999999999998754
No 146
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.45 E-value=2.9e-07 Score=91.42 Aligned_cols=99 Identities=19% Similarity=0.321 Sum_probs=75.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~i 137 (485)
+++++|||+|+.|+.+|..|...|.+|+++++.+.+... ....++...+.+.+++.|+++. .+..+..+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------~~~~~~~~~l~~~l~~~gv~i~-~~~~v~~i 213 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG----------LLHPAAAKAVQAGLEGLGVRFH-LGPVLASL 213 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------TSCHHHHHHHHHHHHTTTCEEE-ESCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc----------ccCHHHHHHHHHHHHHcCCEEE-eCCEEEEE
Confidence 689999999999999999999999999999987653221 1122455667788888998873 56778888
Q ss_pred ecCCCEE--EEecCCccCCCCCceEEeecCEEEEccCCCCCC
Q 011476 138 DAENKKV--YCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (485)
Q Consensus 138 d~~~~~v--~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~ 177 (485)
+.+++.+ .+.++. .+.+|.||+|+|.+|+.
T Consensus 214 ~~~~~~~~v~~~~g~----------~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 214 KKAGEGLEAHLSDGE----------VIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp EEETTEEEEEETTSC----------EEEESEEEECSCEEECC
T ss_pred EecCCEEEEEECCCC----------EEECCEEEECcCCCcCH
Confidence 7655543 333332 79999999999998875
No 147
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.45 E-value=7.5e-08 Score=89.98 Aligned_cols=40 Identities=20% Similarity=0.213 Sum_probs=36.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~ 97 (485)
..+|+|||||||||+||+.|++.|++|+|||+.+.+|+..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~ 41 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcc
Confidence 4689999999999999999999999999999999887753
No 148
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.44 E-value=3.2e-07 Score=93.47 Aligned_cols=108 Identities=15% Similarity=0.181 Sum_probs=77.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++++|||||+.|+.+|..|++.|.+|+|+++.+.+.. . ...++...+.+.+++.|+++. .+.++..
T Consensus 168 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----~------~~~~~~~~l~~~l~~~gV~i~-~~~~v~~ 235 (464)
T 2eq6_A 168 LPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP-----Q------GDPETAALLRRALEKEGIRVR-TKTKAVG 235 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----T------SCHHHHHHHHHHHHHTTCEEE-CSEEEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc-----c------cCHHHHHHHHHHHHhcCCEEE-cCCEEEE
Confidence 357999999999999999999999999999998865321 1 112455567788888998873 5678888
Q ss_pred EecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCC
Q 011476 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (485)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~ 179 (485)
++.+++.+.+....+ ..++...+.+|.||+|+|.+|+...
T Consensus 236 i~~~~~~~~v~~~~~---~~g~~~~i~~D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 236 YEKKKDGLHVRLEPA---EGGEGEEVVVDKVLVAVGRKPRTEG 275 (464)
T ss_dssp EEEETTEEEEEEEET---TCCSCEEEEESEEEECSCEEESCTT
T ss_pred EEEeCCEEEEEEeec---CCCceeEEEcCEEEECCCcccCCCC
Confidence 887655443321100 0022347899999999999987653
No 149
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.44 E-value=2.5e-07 Score=96.74 Aligned_cols=35 Identities=26% Similarity=0.382 Sum_probs=32.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~ 92 (485)
.++|+|||||+||+++|+.|++.|++|+|||+.+.
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~ 57 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAF 57 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCC
Confidence 47999999999999999999999999999998853
No 150
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.43 E-value=3.2e-07 Score=93.07 Aligned_cols=102 Identities=20% Similarity=0.263 Sum_probs=76.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++++|||+|++|+.+|..|++.|.+|+|+++.+.+... ....++...+.+.+++.|+++ +.+..+..
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~gv~i-~~~~~v~~ 216 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV----------YLDKEFTDVLTEEMEANNITI-ATGETVER 216 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------TCCHHHHHHHHHHHHTTTEEE-EESCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc----------cCCHHHHHHHHHHHHhCCCEE-EcCCEEEE
Confidence 4689999999999999999999999999999988653211 011245566778888899876 35678888
Q ss_pred EecCCCE--EEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCC
Q 011476 137 IDAENKK--VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNT 180 (485)
Q Consensus 137 id~~~~~--v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i 180 (485)
++.+++. +.+ ++. .+.+|.||+|+|.+|+...+
T Consensus 217 i~~~~~v~~v~~-~~~----------~i~~d~vi~a~G~~p~~~~~ 251 (447)
T 1nhp_A 217 YEGDGRVQKVVT-DKN----------AYDADLVVVAVGVRPNTAWL 251 (447)
T ss_dssp EECSSBCCEEEE-SSC----------EEECSEEEECSCEEESCGGG
T ss_pred EEccCcEEEEEE-CCC----------EEECCEEEECcCCCCChHHH
Confidence 8876432 333 222 79999999999999876533
No 151
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.42 E-value=2e-07 Score=92.79 Aligned_cols=35 Identities=20% Similarity=0.330 Sum_probs=32.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~ 92 (485)
.++|+|||||++|+++|..|++.|++|+|+|+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 46999999999999999999999999999998764
No 152
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.42 E-value=4e-07 Score=93.52 Aligned_cols=112 Identities=19% Similarity=0.237 Sum_probs=71.8
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCC-----------------Ccccccc----------Cc-c
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP-----------------LLPSVTC----------GT-V 107 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~-----------------~~~~~~~----------~~-~ 107 (485)
+..++|+||||||+|+++|..|++.|++|+|||+.+.....+ +...+.. +. +
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 89 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPV 89 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceec
Confidence 456899999999999999999999999999999875432211 0000000 00 0
Q ss_pred c---------------ccccccchHHHHhhCCCeEEEEEeEEEEEecCCCEEEE--ecCCccCCCCCceEEeecCEEEEc
Q 011476 108 E---------------ARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYC--RSSQNTNLNGKEEFCMDYDYLVIA 170 (485)
Q Consensus 108 ~---------------~~~~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~--~~~~~~~~~~~~~~~~~yd~lviA 170 (485)
+ ...+...+.+.+.+.|++++ ...+++++..+...+++ .++. + ..++.+|+||.|
T Consensus 90 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~-~~~~v~~i~~~~~~v~v~~~~~~-----g--~~~~~a~~vVgA 161 (499)
T 2qa2_A 90 DFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELL-RGHTVRALTDEGDHVVVEVEGPD-----G--PRSLTTRYVVGC 161 (499)
T ss_dssp EGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEE-ESCEEEEEEECSSCEEEEEECSS-----C--EEEEEEEEEEEC
T ss_pred ccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEE-cCCEEEEEEEeCCEEEEEEEcCC-----C--cEEEEeCEEEEc
Confidence 0 00111123444566788874 57889988766554443 3331 1 347999999999
Q ss_pred cCCCC
Q 011476 171 MGARA 175 (485)
Q Consensus 171 tG~~~ 175 (485)
.|.+.
T Consensus 162 DG~~S 166 (499)
T 2qa2_A 162 DGGRS 166 (499)
T ss_dssp CCTTC
T ss_pred cCccc
Confidence 99864
No 153
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.41 E-value=7.4e-07 Score=93.16 Aligned_cols=39 Identities=18% Similarity=0.225 Sum_probs=35.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCccc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF 95 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~ 95 (485)
..++|+|||+|++|+++|+.|++.|++|+|+|+.+..++
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~ 163 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGG 163 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCc
Confidence 357999999999999999999999999999999876654
No 154
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.41 E-value=1.3e-06 Score=85.10 Aligned_cols=96 Identities=18% Similarity=0.195 Sum_probs=74.9
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc---------------------ccc-------
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL---------------------NMF------- 276 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l---------------------~~~------- 276 (485)
+|+|||||+.|+.+|..|.+. +.+|+++++.+.+. +.+
T Consensus 5 ~vvIIG~G~aGl~~A~~l~~~--------------g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (357)
T 4a9w_A 5 DVVVIGGGQSGLSAGYFLRRS--------------GLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQG 70 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHS--------------SCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCcc
Confidence 899999999999999999986 68999999886531 111
Q ss_pred ----cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCCCCCc
Q 011476 277 ----DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHA 337 (485)
Q Consensus 277 ----~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p 337 (485)
..++...+.+.+++.|++++++++|++++. +.+..+...+| . +.+|.||+|+|....|
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~--~~~d~vV~AtG~~~~~ 134 (357)
T 4a9w_A 71 PYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-Q--WLARAVISATGTWGEA 134 (357)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-E--EEEEEEEECCCSGGGB
T ss_pred CCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-E--EEeCEEEECCCCCCCC
Confidence 057788888999999999999999999974 33441444555 3 9999999999953343
No 155
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.40 E-value=4.5e-07 Score=92.13 Aligned_cols=106 Identities=20% Similarity=0.296 Sum_probs=77.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++|+|||+|+.|+.+|..|++.|.+|+|+++.+.+. +. ...++...+.+.+++.|+++ +.+.++..
T Consensus 169 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-----~~------~~~~~~~~l~~~l~~~gv~i-~~~~~v~~ 236 (455)
T 1ebd_A 169 VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL-----SG------FEKQMAAIIKKRLKKKGVEV-VTNALAKG 236 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-----TT------SCHHHHHHHHHHHHHTTCEE-EESEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-----cc------cCHHHHHHHHHHHHHCCCEE-EeCCEEEE
Confidence 35899999999999999999999999999999886532 11 11245555777888899887 36778888
Q ss_pred EecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCC
Q 011476 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (485)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~ 179 (485)
++.+++.+.+.... +++...+.+|.||+|+|.+|+...
T Consensus 237 i~~~~~~~~v~~~~-----~g~~~~~~~D~vv~a~G~~p~~~~ 274 (455)
T 1ebd_A 237 AEEREDGVTVTYEA-----NGETKTIDADYVLVTVGRRPNTDE 274 (455)
T ss_dssp EEEETTEEEEEEEE-----TTEEEEEEESEEEECSCEEESCSS
T ss_pred EEEeCCeEEEEEEe-----CCceeEEEcCEEEECcCCCcccCc
Confidence 87665444332110 111237899999999999987643
No 156
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.39 E-value=5.7e-07 Score=89.65 Aligned_cols=36 Identities=19% Similarity=0.282 Sum_probs=33.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~ 92 (485)
.+++|+|||||++|+++|..|++.|++|+|+|+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 357999999999999999999999999999998865
No 157
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.38 E-value=2.6e-07 Score=94.04 Aligned_cols=103 Identities=17% Similarity=0.289 Sum_probs=76.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++++|||||++|+.+|..|++.|.+|+|+++.+.+. +. ...++...+.+.+++.|++++ .+..+..
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-----~~------~~~~~~~~l~~~l~~~gv~i~-~~~~v~~ 237 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL-----PT------YDSELTAPVAESLKKLGIALH-LGHSVEG 237 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS-----TT------SCHHHHHHHHHHHHHHTCEEE-TTCEEEE
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc-----cc------cCHHHHHHHHHHHHHCCCEEE-ECCEEEE
Confidence 35799999999999999999999999999999887542 11 112444556777888898873 5678999
Q ss_pred EecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCC
Q 011476 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (485)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~ 179 (485)
++. ++ +.+... +++...+.+|.||+|+|.+|+...
T Consensus 238 i~~-~~-v~v~~~------~G~~~~i~~D~vv~a~G~~p~~~~ 272 (458)
T 1lvl_A 238 YEN-GC-LLANDG------KGGQLRLEADRVLVAVGRRPRTKG 272 (458)
T ss_dssp EET-TE-EEEECS------SSCCCEECCSCEEECCCEEECCSS
T ss_pred EEe-CC-EEEEEC------CCceEEEECCEEEECcCCCcCCCC
Confidence 987 44 655521 111237999999999999998653
No 158
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.37 E-value=7.7e-07 Score=92.72 Aligned_cols=36 Identities=14% Similarity=0.350 Sum_probs=33.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~ 92 (485)
..+||+|||||++|+++|+.|+..|++|+|+|+.+.
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~ 52 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDF 52 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSST
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 358999999999999999999999999999998754
No 159
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.36 E-value=2.2e-06 Score=88.46 Aligned_cols=108 Identities=17% Similarity=0.242 Sum_probs=79.8
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccc-------------------------------
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI------------------------------- 272 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~------------------------------- 272 (485)
.+|+|||||+.|+.+|..|++. |.+|+|+++++.+
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~--------------G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~ 173 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQM--------------GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGT 173 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHT--------------TCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGT
T ss_pred CCEEEECcCHHHHHHHHHHHHC--------------CCeEEEEEccCcccccccchhcccccccccccccceeccCCccc
Confidence 4899999999999999999986 6899999987532
Q ss_pred -----c------ccc------------------------------cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcE
Q 011476 273 -----L------NMF------------------------------DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEI 309 (485)
Q Consensus 273 -----l------~~~------------------------------~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v 309 (485)
+ +.+ ...+...+.+.+++.|++++++++|+++.. +++
T Consensus 174 ~sdgkl~~~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v 253 (549)
T 3nlc_A 174 FSDGKLYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQI 253 (549)
T ss_dssp TSCCCCCCCSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBE
T ss_pred ccCCceEEEeccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEE
Confidence 0 000 134556677888889999999999999863 446
Q ss_pred EEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC
Q 011476 310 FTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ 348 (485)
Q Consensus 310 ~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~ 348 (485)
..+.+.+|++ +.||.||+|+|....... .++...|+
T Consensus 254 ~gV~l~~G~~--i~Ad~VVlA~G~~s~~~~-~~l~~~Gi 289 (549)
T 3nlc_A 254 TGVTLSNGEE--IKSRHVVLAVGHSARDTF-EMLHERGV 289 (549)
T ss_dssp EEEEETTSCE--EECSCEEECCCTTCHHHH-HHHHHTTC
T ss_pred EEEEECCCCE--EECCEEEECCCCChhhHH-HHHHHcCC
Confidence 6455567775 999999999995322222 45666665
No 160
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.36 E-value=1.2e-06 Score=84.69 Aligned_cols=92 Identities=15% Similarity=0.142 Sum_probs=73.2
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc---------------cc----ccHHHHHHH
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL---------------NM----FDKRITAFA 284 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l---------------~~----~~~~~~~~~ 284 (485)
.+|+|||||+.|+.+|..|.+. +.+|+++++.+.+. +. ...++...+
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~--------------g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMR--------------QASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNL 73 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHC--------------CCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHH
Confidence 4899999999999999999985 68999999976432 11 135677888
Q ss_pred HHHHHhCCcEEEcCceEEEEeCC---cEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 285 EEKFSRDGIDVKLGSMVVKVTDK---EIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 285 ~~~l~~~gV~v~~~~~v~~v~~~---~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
.+.+++.|+++++++.|++++.+ ...+.. .+|+ +.+|.||+|+|.
T Consensus 74 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~-~~g~---~~~d~vVlAtG~ 121 (332)
T 3lzw_A 74 KEQMAKFDQTICLEQAVESVEKQADGVFKLVT-NEET---HYSKTVIITAGN 121 (332)
T ss_dssp HHHHTTSCCEEECSCCEEEEEECTTSCEEEEE-SSEE---EEEEEEEECCTT
T ss_pred HHHHHHhCCcEEccCEEEEEEECCCCcEEEEE-CCCE---EEeCEEEECCCC
Confidence 88888899999999999999753 234443 4554 899999999994
No 161
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.36 E-value=8.3e-07 Score=89.04 Aligned_cols=99 Identities=18% Similarity=0.227 Sum_probs=77.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~i 137 (485)
.++++|||+|+.|+.+|..|...|.+|+++++.+.+... .....+...+.+.+++.|++++ .+..+..+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~----------~~~~~~~~~l~~~l~~~GV~i~-~~~~v~~i 220 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR----------VAGEALSEFYQAEHRAHGVDLR-TGAAMDCI 220 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------TSCHHHHHHHHHHHHHTTCEEE-ETCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh----------hcCHHHHHHHHHHHHhCCCEEE-ECCEEEEE
Confidence 679999999999999999999999999999988654211 1112455567788889998873 57788888
Q ss_pred ecCCC---EEEEecCCccCCCCCceEEeecCEEEEccCCCCCC
Q 011476 138 DAENK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (485)
Q Consensus 138 d~~~~---~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~ 177 (485)
..++. .+.+.++. .+.+|.||+|+|..|+.
T Consensus 221 ~~~~~~v~~v~l~dG~----------~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 221 EGDGTKVTGVRMQDGS----------VIPADIVIVGIGIVPCV 253 (415)
T ss_dssp EESSSBEEEEEESSSC----------EEECSEEEECSCCEESC
T ss_pred EecCCcEEEEEeCCCC----------EEEcCEEEECCCCccCh
Confidence 77543 35555544 89999999999999875
No 162
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.35 E-value=4.4e-06 Score=82.55 Aligned_cols=98 Identities=17% Similarity=0.232 Sum_probs=75.5
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc-----------------------------
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN----------------------------- 274 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~----------------------------- 274 (485)
.+|+|||||+.|+.+|..|.+. |.+|+|+++.+.+..
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~~--------------G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~ 77 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQN--------------GWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSH 77 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCB
T ss_pred CeEEEECCCHHHHHHHHHHHHC--------------CCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCC
Confidence 4899999999999999999986 689999998764321
Q ss_pred ---------------cc-----------cHHHHHHHHHHHHhCCcEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEE
Q 011476 275 ---------------MF-----------DKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVV 328 (485)
Q Consensus 275 ---------------~~-----------~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi 328 (485)
.+ ...+...+.+.+++.||+++++++|++++.++ .+.. .+|++ +.+|.||
T Consensus 78 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~~-~~g~~--~~ad~vV 153 (379)
T 3alj_A 78 TPPTYETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVG-RLTL-QTGEV--LEADLIV 153 (379)
T ss_dssp CCSCEEEEETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEEE-TTSCE--EECSEEE
T ss_pred CccceEEEeCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEEE-CCCCE--EEcCEEE
Confidence 00 03456677788888999999999999998655 4443 56764 9999999
Q ss_pred EccCCCCCcchHH
Q 011476 329 WSTGIAPHAIIKD 341 (485)
Q Consensus 329 ~a~G~~~~p~~~~ 341 (485)
.|+| ..+.+..
T Consensus 154 ~AdG--~~s~vr~ 164 (379)
T 3alj_A 154 GADG--VGSKVRD 164 (379)
T ss_dssp ECCC--TTCHHHH
T ss_pred ECCC--ccHHHHH
Confidence 9999 4554433
No 163
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.35 E-value=3.6e-07 Score=95.74 Aligned_cols=39 Identities=23% Similarity=0.299 Sum_probs=34.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCC------CCcEEEEcCCCCccc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNP------SYDVQVISPRNYFAF 95 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~------g~~V~lie~~~~~~~ 95 (485)
+.+||+|||||+||+++|+.|++. |++|+|||+.+..+.
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~ 78 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGA 78 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTT
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCC
Confidence 458999999999999999999987 999999999876543
No 164
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.33 E-value=1.7e-07 Score=93.83 Aligned_cols=35 Identities=17% Similarity=0.274 Sum_probs=32.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC--CCcEEEEcCCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNY 92 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~--g~~V~lie~~~~ 92 (485)
.+||+|||||++|+++|++|++. |++|+|||+...
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 47999999999999999999988 999999998753
No 165
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.33 E-value=1.1e-06 Score=90.46 Aligned_cols=39 Identities=26% Similarity=0.233 Sum_probs=35.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCccc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF 95 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~ 95 (485)
..+||||||+|+||+++|+.|++.|++|+|||+.+..++
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG 78 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGG 78 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 457999999999999999999999999999999877654
No 166
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.33 E-value=5e-07 Score=90.47 Aligned_cols=99 Identities=15% Similarity=0.268 Sum_probs=76.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~i 137 (485)
.++|+|||+|+.|+.+|..|...|.+|+++++.+.+.. . ....++...+.+.+++.|++++ .+..+..+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~-----~-----~~~~~~~~~l~~~l~~~GV~i~-~~~~v~~i 211 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV-----R-----VLGRRIGAWLRGLLTELGVQVE-LGTGVVGF 211 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH-----H-----HHCHHHHHHHHHHHHHHTCEEE-CSCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch-----h-----hcCHHHHHHHHHHHHHCCCEEE-eCCEEEEE
Confidence 67999999999999999999999999999998865321 0 0112455567778888898863 57788888
Q ss_pred ecCCC--EEEEecCCccCCCCCceEEeecCEEEEccCCCCCC
Q 011476 138 DAENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (485)
Q Consensus 138 d~~~~--~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~ 177 (485)
+.+++ .+.+.++. .+.+|.||+|+|.+|+.
T Consensus 212 ~~~~~~~~v~~~dg~----------~i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 212 SGEGQLEQVMASDGR----------SFVADSALICVGAEPAD 243 (410)
T ss_dssp ECSSSCCEEEETTSC----------EEECSEEEECSCEEECC
T ss_pred eccCcEEEEEECCCC----------EEEcCEEEEeeCCeecH
Confidence 77554 46666654 89999999999999875
No 167
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.33 E-value=1.5e-06 Score=88.00 Aligned_cols=78 Identities=17% Similarity=0.223 Sum_probs=52.4
Q ss_pred eEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEEeC----------------C-cEEEEEcCCCeEEEE--
Q 011476 262 KITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD----------------K-EIFTKVRGNGETSSM-- 322 (485)
Q Consensus 262 ~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~----------------~-~v~~~~~~~G~~~~i-- 322 (485)
...++......+ -+..+...+.+.+++.|++++++++|+++.. + ++..+...+|+ +
T Consensus 167 ~~~~~~~~~~~~--~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g~---i~~ 241 (448)
T 3axb_A 167 EGAVLIRSAGFL--DAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDGT---RVE 241 (448)
T ss_dssp CEEEEESSEEEC--CHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTSC---EEE
T ss_pred eEEEEeCCCeEE--cHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCCE---Eee
Confidence 334454443322 1347778888999999999999999999863 2 34334445663 8
Q ss_pred ecCeEEEccCCCCCcchHHHHHHhCC
Q 011476 323 PYGMVVWSTGIAPHAIIKDFMKQVGQ 348 (485)
Q Consensus 323 ~~D~vi~a~G~~~~p~~~~l~~~~g~ 348 (485)
.+|.||+|+|. ....|+..+|+
T Consensus 242 ~Ad~VV~AtG~----~s~~l~~~~g~ 263 (448)
T 3axb_A 242 VGEKLVVAAGV----WSNRLLNPLGI 263 (448)
T ss_dssp EEEEEEECCGG----GHHHHHGGGTC
T ss_pred cCCEEEECCCc----CHHHHHHHcCC
Confidence 99999999993 33356666553
No 168
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.32 E-value=8.3e-07 Score=91.31 Aligned_cols=34 Identities=18% Similarity=0.427 Sum_probs=32.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
.+||+|||||++|+++|+.|++.|++|+|+|+.+
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 4799999999999999999999999999999875
No 169
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.32 E-value=3.6e-07 Score=92.16 Aligned_cols=94 Identities=21% Similarity=0.319 Sum_probs=69.0
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc--cccc---------HHHHHHHHHHHHhCC
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL--NMFD---------KRITAFAEEKFSRDG 292 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l--~~~~---------~~~~~~~~~~l~~~g 292 (485)
|+|||||||+.|+.+|..|.+++ ++.+||||++.+.+. |.+. +++...+.+.+++.|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~------------~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~g 70 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLM------------PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN 70 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT
T ss_pred CcEEEECCCHHHHHHHHHHhccC------------cCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCC
Confidence 58999999999999999998864 357999999988642 2111 111112345567789
Q ss_pred cEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 293 V~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
|+++.+ +|++|+.+.-++.. ++|++ +++|.+|+|+|.
T Consensus 71 v~~i~~-~v~~Id~~~~~V~~-~~g~~--i~YD~LViAtG~ 107 (430)
T 3hyw_A 71 IEFINE-KAESIDPDANTVTT-QSGKK--IEYDYLVIATGP 107 (430)
T ss_dssp EEEECS-CEEEEETTTTEEEE-TTCCE--EECSEEEECCCC
T ss_pred cEEEEe-EEEEEECCCCEEEE-CCCCE--EECCEEEEeCCC
Confidence 999876 69999876544443 56775 999999999994
No 170
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.31 E-value=6.8e-07 Score=90.65 Aligned_cols=99 Identities=15% Similarity=0.186 Sum_probs=75.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~i 137 (485)
+++++|||||+.|+.+|..|++.|.+|+|+++.+.+. +. . ..++...+.+.+++.|+++ +.+.++..+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-----~~-----~-~~~~~~~l~~~l~~~Gv~i-~~~~~v~~i 234 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL-----PS-----F-DPMISETLVEVMNAEGPQL-HTNAIPKAV 234 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-----TT-----S-CHHHHHHHHHHHHHHSCEE-ECSCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh-----hh-----h-hHHHHHHHHHHHHHCCCEE-EeCCEEEEE
Confidence 5799999999999999999999999999999876532 11 1 1144555677788889887 356778888
Q ss_pred ecCC-C--EEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 138 DAEN-K--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 138 d~~~-~--~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
+.++ + .+.+.++. .+.+|.||+|+|.+|+..
T Consensus 235 ~~~~~~~~~v~~~~g~----------~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 235 VKNTDGSLTLELEDGR----------SETVDCLIWAIGREPAND 268 (450)
T ss_dssp EECTTSCEEEEETTSC----------EEEESEEEECSCEEESCT
T ss_pred EEeCCcEEEEEECCCc----------EEEcCEEEECCCCCcCCC
Confidence 7643 2 45554443 799999999999998764
No 171
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.31 E-value=9.7e-07 Score=89.18 Aligned_cols=99 Identities=22% Similarity=0.340 Sum_probs=72.8
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc--cc---------ccHHHHHHHHHHHHhCC
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL--NM---------FDKRITAFAEEKFSRDG 292 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l--~~---------~~~~~~~~~~~~l~~~g 292 (485)
++|+|||||+.|+.+|..|.+... .+.+|+|+++.+.+. +. ...++...+.+.+++.|
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~-----------~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g 73 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG-----------SGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKG 73 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG-----------GGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTT
T ss_pred CcEEEECCcHHHHHHHHHHhccCC-----------CcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCC
Confidence 489999999999999999998321 268999999988652 21 11233334567788899
Q ss_pred cEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcch
Q 011476 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAII 339 (485)
Q Consensus 293 V~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~ 339 (485)
|+++. .++++++.+...+.. .+|++ +.+|.||+|+| ..|+.
T Consensus 74 v~~~~-~~v~~id~~~~~V~~-~~g~~--i~~d~lviAtG--~~~~~ 114 (437)
T 3sx6_A 74 IHFIA-QSAEQIDAEAQNITL-ADGNT--VHYDYLMIATG--PKLAF 114 (437)
T ss_dssp CEEEC-SCEEEEETTTTEEEE-TTSCE--EECSEEEECCC--CEECG
T ss_pred CEEEE-eEEEEEEcCCCEEEE-CCCCE--EECCEEEECCC--CCcCc
Confidence 99985 689999875433433 46665 89999999999 56654
No 172
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.31 E-value=4.6e-06 Score=84.83 Aligned_cols=105 Identities=13% Similarity=0.265 Sum_probs=74.3
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCce---EEEEecCccccc--------------------------
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVK---ITLLEAADHILN-------------------------- 274 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~---Vtlv~~~~~~l~-------------------------- 274 (485)
++|+|||||+.|+.+|..|.+... .|.+ |+++++.+.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~-----------~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~ 71 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQE-----------KGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLW 71 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHH-----------TTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCB
T ss_pred CcEEEECccHHHHHHHHHHHhhhh-----------cCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchh
Confidence 389999999999999999998210 1567 999998764310
Q ss_pred -----------cc---------------cHHHHHHHHHHHHhCCcE--EEcCceEEEEeC--C--c--EEEEEcCCCeEE
Q 011476 275 -----------MF---------------DKRITAFAEEKFSRDGID--VKLGSMVVKVTD--K--E--IFTKVRGNGETS 320 (485)
Q Consensus 275 -----------~~---------------~~~~~~~~~~~l~~~gV~--v~~~~~v~~v~~--~--~--v~~~~~~~G~~~ 320 (485)
.+ ..++.+++.+.+++.|++ ++++++|++++. + . +++....+|+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~ 151 (464)
T 2xve_A 72 SNGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIY 151 (464)
T ss_dssp CSSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred hcCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceE
Confidence 00 134566777778888998 999999999963 3 2 333332246545
Q ss_pred EEecCeEEEccCCCCCcch
Q 011476 321 SMPYGMVVWSTGIAPHAII 339 (485)
Q Consensus 321 ~i~~D~vi~a~G~~~~p~~ 339 (485)
++.+|.||+|+|....|+.
T Consensus 152 ~~~~d~VVvAtG~~s~p~~ 170 (464)
T 2xve_A 152 SEEFDYVVCCTGHFSTPYV 170 (464)
T ss_dssp EEEESEEEECCCSSSSBCC
T ss_pred EEEcCEEEECCCCCCCCcc
Confidence 6899999999995445554
No 173
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.30 E-value=8.2e-07 Score=88.56 Aligned_cols=99 Identities=19% Similarity=0.266 Sum_probs=69.8
Q ss_pred cccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccccc----------ccHHHHHHHHHHHHhCC
Q 011476 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM----------FDKRITAFAEEKFSRDG 292 (485)
Q Consensus 223 ~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~~~~l~~~g 292 (485)
||||+|||||+.|+.+|..|.+.+ ++.+|+||++.+..... .+.+....-.+.+.+.|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~------------~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~g 69 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLAD------------PSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHG 69 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTT
T ss_pred cCEEEEECCcHHHHHHHHHHHhcC------------cCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCC
Confidence 689999999999999999998863 35799999988753211 11110001124456789
Q ss_pred cEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcch
Q 011476 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAII 339 (485)
Q Consensus 293 V~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~ 339 (485)
|+++.+ +|++|+.+...+.. .+|.+ +.+|.+|+|+| ..++.
T Consensus 70 v~~i~~-~v~~id~~~~~v~~-~~g~~--i~yd~LviAtG--~~~~~ 110 (401)
T 3vrd_B 70 IQVVHD-SALGIDPDKKLVKT-AGGAE--FAYDRCVVAPG--IDLLY 110 (401)
T ss_dssp CEEECS-CEEEEETTTTEEEE-TTSCE--EECSEEEECCC--EEECG
T ss_pred CEEEEe-EEEEEEccCcEEEe-cccce--eecceeeeccC--Ccccc
Confidence 999865 68899876544443 56765 99999999999 45544
No 174
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.29 E-value=1.6e-06 Score=89.08 Aligned_cols=99 Identities=17% Similarity=0.329 Sum_probs=75.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~i 137 (485)
+++++|||||+.|+.+|..|++.|.+|+++++.+.+. +. . ..++...+.+.+++.|+++ +.+..+..+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-----~~-----~-d~~~~~~l~~~l~~~gv~i-~~~~~v~~i 243 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL-----RK-----F-DESVINVLENDMKKNNINI-VTFADVVEI 243 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC-----TT-----S-CHHHHHHHHHHHHHTTCEE-ECSCCEEEE
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC-----cc-----c-chhhHHHHHHHHHhCCCEE-EECCEEEEE
Confidence 6799999999999999999999999999999876532 11 1 1244556778888999887 357778888
Q ss_pred ecCC-C--EEEEecCCccCCCCCceEE-eecCEEEEccCCCCCCC
Q 011476 138 DAEN-K--KVYCRSSQNTNLNGKEEFC-MDYDYLVIAMGARANTF 178 (485)
Q Consensus 138 d~~~-~--~v~~~~~~~~~~~~~~~~~-~~yd~lviAtG~~~~~~ 178 (485)
+.+. + .+.+.++. . +.+|.||+|+|.+|+..
T Consensus 244 ~~~~~~~~~v~~~~g~----------~~~~~D~vi~a~G~~p~~~ 278 (500)
T 1onf_A 244 KKVSDKNLSIHLSDGR----------IYEHFDHVIYCVGRSPDTE 278 (500)
T ss_dssp EESSTTCEEEEETTSC----------EEEEESEEEECCCBCCTTT
T ss_pred EEcCCceEEEEECCCc----------EEEECCEEEECCCCCcCCC
Confidence 7643 2 44444432 4 89999999999998863
No 175
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.29 E-value=1.4e-06 Score=89.15 Aligned_cols=104 Identities=12% Similarity=0.254 Sum_probs=76.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~i 137 (485)
+++++|||||+.|+.+|..|++.|.+|+|+++.+.+.. .+ ..++...+.+.+++.|+++. .+..+..+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--~~---------~~~~~~~l~~~l~~~gv~i~-~~~~v~~i 250 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA--SM---------DGEVAKATQKFLKKQGLDFK-LSTKVISA 250 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS--SS---------CHHHHHHHHHHHHHTTCEEE-CSEEEEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc--cc---------CHHHHHHHHHHHHHCCCEEE-eCCEEEEE
Confidence 58999999999999999999999999999998875321 11 12455567788888998873 56788888
Q ss_pred ec--CCCE--EEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 138 DA--ENKK--VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 138 d~--~~~~--v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
+. +++. +.+.+.. +++...+.+|.||+|+|.+|+..
T Consensus 251 ~~~~~~~~~~v~~~~~~-----~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 251 KRNDDKNVVEIVVEDTK-----TNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp EEETTTTEEEEEEEETT-----TTEEEEEEESEEEECSCEEECCT
T ss_pred EEecCCCeEEEEEEEcC-----CCCceEEECCEEEECCCCCcCCC
Confidence 76 4443 3333210 11123799999999999998765
No 176
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.29 E-value=9.9e-07 Score=88.25 Aligned_cols=101 Identities=17% Similarity=0.273 Sum_probs=72.6
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc--c---------ccHHHHHHHHHHHHhCC
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN--M---------FDKRITAFAEEKFSRDG 292 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~--~---------~~~~~~~~~~~~l~~~g 292 (485)
++|+|||||+.|+.+|..|.+... .+.+|+|+++.+.+.. . ...++...+.+.+++.|
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~-----------~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 70 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG-----------SKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKG 70 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG-----------GGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGT
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC-----------CCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCC
Confidence 389999999999999999998211 2689999999886521 1 11233344667778889
Q ss_pred cEEEcCceEEEEeCC--cEEEEEcCCCeEEEEecCeEEEccCCCCCcch
Q 011476 293 IDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGIAPHAII 339 (485)
Q Consensus 293 V~v~~~~~v~~v~~~--~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~ 339 (485)
|+++.+ ++++++.+ .+.+.. .+++..++.+|.||+|+| ..|+.
T Consensus 71 v~~~~~-~v~~i~~~~~~V~~~~-g~~~~~~~~~d~lViAtG--~~~~~ 115 (409)
T 3h8l_A 71 IQFQEG-TVEKIDAKSSMVYYTK-PDGSMAEEEYDYVIVGIG--AHLAT 115 (409)
T ss_dssp CEEEEC-EEEEEETTTTEEEEEC-TTSCEEEEECSEEEECCC--CEECG
T ss_pred eEEEEe-eEEEEeCCCCEEEEcc-CCcccceeeCCEEEECCC--CCcCc
Confidence 999988 89999765 344433 233345689999999999 45554
No 177
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.29 E-value=1.3e-06 Score=88.09 Aligned_cols=97 Identities=19% Similarity=0.334 Sum_probs=78.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~i 137 (485)
+++++|||||+.|+.+|..+++.|.+|+|+++.+.+.- . ...++...+.+.+++.|+++. .+.++..+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~-----~------~d~~~~~~~~~~l~~~gV~i~-~~~~v~~~ 214 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINK-----L------MDADMNQPILDELDKREIPYR-LNEEINAI 214 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCST-----T------SCGGGGHHHHHHHHHTTCCEE-ESCCEEEE
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccc-----c------ccchhHHHHHHHhhccceEEE-eccEEEEe
Confidence 56999999999999999999999999999998865321 1 112556667888999999984 67788888
Q ss_pred ecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
+. ..+.+++++ .+.+|.|++|+|.+|+..
T Consensus 215 ~~--~~v~~~~g~----------~~~~D~vl~a~G~~Pn~~ 243 (437)
T 4eqs_A 215 NG--NEITFKSGK----------VEHYDMIIEGVGTHPNSK 243 (437)
T ss_dssp ET--TEEEETTSC----------EEECSEEEECCCEEESCG
T ss_pred cC--CeeeecCCe----------EEeeeeEEEEeceecCcH
Confidence 64 567777665 899999999999998754
No 178
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.29 E-value=2.5e-06 Score=82.52 Aligned_cols=95 Identities=19% Similarity=0.200 Sum_probs=73.3
Q ss_pred hcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCc----cc------------cccc-----cHHH
Q 011476 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD----HI------------LNMF-----DKRI 280 (485)
Q Consensus 222 ~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~----~~------------l~~~-----~~~~ 280 (485)
..++|+|||||+.|+.+|..|++. |.+|+|+++.+ .+ .+.+ ..++
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~--------------g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~ 86 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARA--------------EIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSEL 86 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--------------TCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--------------CCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHH
Confidence 456999999999999999999996 68999999843 11 1122 3477
Q ss_pred HHHHHHHHHhCCcEEEcCceEEEEeCC--cEEEEEc--CCCeEEEEecCeEEEccCC
Q 011476 281 TAFAEEKFSRDGIDVKLGSMVVKVTDK--EIFTKVR--GNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 281 ~~~~~~~l~~~gV~v~~~~~v~~v~~~--~v~~~~~--~~G~~~~i~~D~vi~a~G~ 333 (485)
...+.+.+++.|++++.++ +++++.+ .+.+... .++.. +.+|.||+|+|.
T Consensus 87 ~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~--~~~d~vvlAtG~ 140 (338)
T 3itj_A 87 MDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEP--VTTDAIILATGA 140 (338)
T ss_dssp HHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCC--EEEEEEEECCCE
T ss_pred HHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcE--EEeCEEEECcCC
Confidence 7888899999999999998 8888753 4555442 23443 899999999994
No 179
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.29 E-value=3.7e-06 Score=80.75 Aligned_cols=96 Identities=16% Similarity=0.227 Sum_probs=73.5
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecC--cccc--------cc----ccHHHHHHHHHHHH
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAA--DHIL--------NM----FDKRITAFAEEKFS 289 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~--~~~l--------~~----~~~~~~~~~~~~l~ 289 (485)
.+|+|||||+.|+.+|..|.+. +.+|+|+++. ..+. +. ...++...+.+.++
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~--------------g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARY--------------MLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIE 81 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHH
T ss_pred cCEEEECccHHHHHHHHHHHHC--------------CCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 4899999999999999999986 6899999986 1111 11 13567778888889
Q ss_pred hCCcEEEcCceEEEEeCC--cEEEEEcCCCeEEEEecCeEEEccCCCCCcch
Q 011476 290 RDGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGIAPHAII 339 (485)
Q Consensus 290 ~~gV~v~~~~~v~~v~~~--~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~ 339 (485)
+.|++++. +.|++++.+ .+.+.. .+|.. +.+|.||+|+|. .|..
T Consensus 82 ~~~v~~~~-~~v~~i~~~~~~~~v~~-~~g~~--~~~d~lvlAtG~--~~~~ 127 (323)
T 3f8d_A 82 KYEVPVLL-DIVEKIENRGDEFVVKT-KRKGE--FKADSVILGIGV--KRRK 127 (323)
T ss_dssp TTTCCEEE-SCEEEEEEC--CEEEEE-SSSCE--EEEEEEEECCCC--EECC
T ss_pred HcCCEEEE-EEEEEEEecCCEEEEEE-CCCCE--EEcCEEEECcCC--CCcc
Confidence 99999999 889998754 344444 45554 899999999994 4543
No 180
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.28 E-value=2.8e-06 Score=84.20 Aligned_cols=96 Identities=17% Similarity=0.333 Sum_probs=71.6
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc---ccccH---------HHHHHHHHHHHhCC
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL---NMFDK---------RITAFAEEKFSRDG 292 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l---~~~~~---------~~~~~~~~~l~~~g 292 (485)
+|+|||||+.|+.+|..|.. .+.+|+|+++.+.+. +.++. ++.....+.+++.|
T Consensus 11 ~~vIvGgG~AGl~aA~~L~~--------------~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~ 76 (385)
T 3klj_A 11 KILILGAGPAGFSAAKAALG--------------KCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNN 76 (385)
T ss_dssp SEEEECCSHHHHHHHHHHTT--------------TCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTT
T ss_pred CEEEEcCcHHHHHHHHHHhC--------------CCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCC
Confidence 89999999999999999943 378999999987642 12211 11122456678899
Q ss_pred cEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcch
Q 011476 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAII 339 (485)
Q Consensus 293 V~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~ 339 (485)
|+++++++|++++.+.-.+.. .+|++ +.+|.+|+||| ..|..
T Consensus 77 i~~~~~~~V~~id~~~~~v~~-~~g~~--~~yd~lvlAtG--~~p~~ 118 (385)
T 3klj_A 77 IKVITSEFATSIDPNNKLVTL-KSGEK--IKYEKLIIASG--SIANK 118 (385)
T ss_dssp CEEECSCCEEEEETTTTEEEE-TTSCE--EECSEEEECCC--EEECC
T ss_pred CEEEeCCEEEEEECCCCEEEE-CCCCE--EECCEEEEecC--CCcCC
Confidence 999999999999875544443 56765 99999999999 56544
No 181
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.27 E-value=1.1e-06 Score=87.66 Aligned_cols=99 Identities=21% Similarity=0.318 Sum_probs=75.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~i 137 (485)
.++++|||+|+.|+.+|..|...|.+|+++++.+.+... ....++...+.+.+++.|++++ .+..+..+
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~----------~~~~~~~~~l~~~l~~~GV~i~-~~~~v~~i 210 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMAR----------VVTPEISSYFHDRHSGAGIRMH-YGVRATEI 210 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT----------TSCHHHHHHHHHHHHHTTCEEE-CSCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhh----------ccCHHHHHHHHHHHHhCCcEEE-ECCEEEEE
Confidence 578999999999999999999999999999988654211 0112455567788888998873 56678888
Q ss_pred ecCCC---EEEEecCCccCCCCCceEEeecCEEEEccCCCCCC
Q 011476 138 DAENK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (485)
Q Consensus 138 d~~~~---~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~ 177 (485)
..++. .+.+.++. .+.+|.||+|+|..|+.
T Consensus 211 ~~~~~~v~~V~~~dG~----------~i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 211 AAEGDRVTGVVLSDGN----------TLPCDLVVVGVGVIPNV 243 (404)
T ss_dssp EEETTEEEEEEETTSC----------EEECSEEEECCCEEECC
T ss_pred EecCCcEEEEEeCCCC----------EEEcCEEEECcCCccCH
Confidence 76544 34555543 89999999999998875
No 182
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.27 E-value=1.2e-06 Score=88.38 Aligned_cols=100 Identities=18% Similarity=0.308 Sum_probs=74.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... ....++...+.+.+++.|+++. .+..+..
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~GV~i~-~~~~v~~ 216 (431)
T 1q1r_A 148 ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER----------VTAPPVSAFYEHLHREAGVDIR-TGTQVCG 216 (431)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT----------TSCHHHHHHHHHHHHHHTCEEE-CSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc----------hhhHHHHHHHHHHHHhCCeEEE-eCCEEEE
Confidence 3679999999999999999999999999999987653210 0112444556777888898873 5667888
Q ss_pred Eec--CC-C--EEEEecCCccCCCCCceEEeecCEEEEccCCCCCC
Q 011476 137 IDA--EN-K--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (485)
Q Consensus 137 id~--~~-~--~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~ 177 (485)
++. ++ + .+.+.++. .+.+|.||+|+|.+|+.
T Consensus 217 i~~~~~~~~v~~v~~~~G~----------~i~~D~Vv~a~G~~p~~ 252 (431)
T 1q1r_A 217 FEMSTDQQKVTAVLCEDGT----------RLPADLVIAGIGLIPNC 252 (431)
T ss_dssp EEECTTTCCEEEEEETTSC----------EEECSEEEECCCEEECC
T ss_pred EEeccCCCcEEEEEeCCCC----------EEEcCEEEECCCCCcCc
Confidence 875 33 3 34554443 89999999999998864
No 183
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.27 E-value=1.5e-06 Score=83.77 Aligned_cols=38 Identities=16% Similarity=0.204 Sum_probs=34.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC--CCcEEEEcCCCCccc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAF 95 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~--g~~V~lie~~~~~~~ 95 (485)
.+||+|||||++|+++|++|++. |++|+|||+.+.+++
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GG 118 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGG 118 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCC
Confidence 57999999999999999999975 999999999876653
No 184
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.27 E-value=3.4e-06 Score=81.71 Aligned_cols=93 Identities=15% Similarity=0.161 Sum_probs=72.5
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc---------------cc----ccHHHHHHH
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL---------------NM----FDKRITAFA 284 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l---------------~~----~~~~~~~~~ 284 (485)
.+|+|||||+.|+.+|..|.+. +.+|+|+++.+.+. +. ...++...+
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~--------------g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 71 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMR--------------GLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGL 71 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHH
Confidence 4899999999999999999875 68999999876431 11 125666777
Q ss_pred HHHHHhCCcEEEcCceEEEEeCC--cEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 285 EEKFSRDGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 285 ~~~l~~~gV~v~~~~~v~~v~~~--~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
.+.+++.++++++++.|.+++.+ .+.+.. .+|+. +.+|.||+|+|.
T Consensus 72 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~-~~g~~--~~~~~lv~AtG~ 119 (335)
T 2zbw_A 72 VEQVAPFNPVYSLGERAETLEREGDLFKVTT-SQGNA--YTAKAVIIAAGV 119 (335)
T ss_dssp HHHHGGGCCEEEESCCEEEEEEETTEEEEEE-TTSCE--EEEEEEEECCTT
T ss_pred HHHHHHcCCEEEeCCEEEEEEECCCEEEEEE-CCCCE--EEeCEEEECCCC
Confidence 78888889999999999998643 344443 55654 899999999994
No 185
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.26 E-value=1.3e-06 Score=87.37 Aligned_cols=36 Identities=17% Similarity=0.314 Sum_probs=33.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCc-EEEEcCCCCc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYD-VQVISPRNYF 93 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~-V~lie~~~~~ 93 (485)
.++|+|||||++|+++|..|++.|++ |+|||+.+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEI 40 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCc
Confidence 47999999999999999999999999 9999988654
No 186
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.26 E-value=1.5e-05 Score=87.13 Aligned_cols=65 Identities=14% Similarity=0.221 Sum_probs=47.3
Q ss_pred cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC
Q 011476 277 DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ 348 (485)
Q Consensus 277 ~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~ 348 (485)
+..+...+.+.+++.|++++.++.|+++.. +++..+.+.+| . +.+|.||+|+|. ....+.+.+|+
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~--i~Ad~VV~AaG~----~s~~l~~~~g~ 216 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-V--IPADIVVSCAGF----WGAKIGAMIGM 216 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-E--EECSEEEECCGG----GHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-E--EECCEEEECCcc----chHHHHHHhCC
Confidence 346778888999999999999999999963 45544444555 3 999999999993 22345554443
No 187
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.26 E-value=4.5e-06 Score=83.49 Aligned_cols=106 Identities=17% Similarity=0.242 Sum_probs=78.9
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccccc-----------------------------
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM----------------------------- 275 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~----------------------------- 275 (485)
+|+|||||+.|+.+|..|++. |.+|+|+++.+.+...
T Consensus 29 dViIIGgG~AGl~aA~~La~~--------------G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~ 94 (417)
T 3v76_A 29 DVVIIGAGAAGMMCAIEAGKR--------------GRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFC 94 (417)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTT
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHH
Confidence 899999999999999999986 6899999987643100
Q ss_pred -----------------------------------ccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCe
Q 011476 276 -----------------------------------FDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGE 318 (485)
Q Consensus 276 -----------------------------------~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~ 318 (485)
....+.+.+.+.+++.||+++++++|+++.. +.+.+.. .+|
T Consensus 95 ~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~-~~g- 172 (417)
T 3v76_A 95 KSALARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTT-SAG- 172 (417)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEE-TTE-
T ss_pred HHHHHhcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEE-CCc-
Confidence 0124556777888889999999999999853 4455544 455
Q ss_pred EEEEecCeEEEccCCCCCcch------HHHHHHhCC
Q 011476 319 TSSMPYGMVVWSTGIAPHAII------KDFMKQVGQ 348 (485)
Q Consensus 319 ~~~i~~D~vi~a~G~~~~p~~------~~l~~~~g~ 348 (485)
++.+|.||+|+|..+.|.+ ..+++.+|.
T Consensus 173 --~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~ 206 (417)
T 3v76_A 173 --TVDAASLVVASGGKSIPKMGATGLAYRIAEQFGL 206 (417)
T ss_dssp --EEEESEEEECCCCSSCGGGTCCCHHHHHHHHTTC
T ss_pred --EEEeeEEEECCCCccCCCCCCCcHHHHHHHHCCC
Confidence 3999999999996544432 246677765
No 188
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.26 E-value=1.3e-06 Score=89.26 Aligned_cols=105 Identities=16% Similarity=0.206 Sum_probs=75.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~i 137 (485)
+++++|||+|+.|+.+|..|++.|.+|+++++.+.+... . ...++...+.+.+++.|+++. .+..+..+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----~------~~~~~~~~l~~~l~~~Gv~i~-~~~~v~~i 246 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV----G------IDMEISKNFQRILQKQGFKFK-LNTKVTGA 246 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS----S------CCHHHHHHHHHHHHHTTCEEE-CSEEEEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc----c------cCHHHHHHHHHHHHHCCCEEE-eCceEEEE
Confidence 579999999999999999999999999999988653210 0 112455567788888998873 57788888
Q ss_pred ecCCCE-EEEe--cCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 138 DAENKK-VYCR--SSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 138 d~~~~~-v~~~--~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
+.+++. +.+. +.. .++...+.+|.||+|+|.+|+..
T Consensus 247 ~~~~~~~~~v~~~~~~-----~~~~~~i~~D~vv~a~G~~p~~~ 285 (474)
T 1zmd_A 247 TKKSDGKIDVSIEAAS-----GGKAEVITCDVLLVCIGRRPFTK 285 (474)
T ss_dssp EECTTSCEEEEEEETT-----SCCCEEEEESEEEECSCEEECCT
T ss_pred EEcCCceEEEEEEecC-----CCCceEEEcCEEEECcCCCcCCC
Confidence 865532 3332 100 00113799999999999998764
No 189
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.24 E-value=2e-06 Score=88.22 Aligned_cols=100 Identities=18% Similarity=0.326 Sum_probs=75.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++|+|||+|+.|+.+|..|++.|.+|+|+++.+.+... . ...++...+.+.+++.|+++ +.+.++..
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---------~-~~~~~~~~l~~~l~~~GV~i-~~~~~v~~ 261 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG---------Y-YDRDLTDLMAKNMEEHGIQL-AFGETVKE 261 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT---------T-SCHHHHHHHHHHHHTTTCEE-EETCCEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh---------H-HHHHHHHHHHHHHHhCCeEE-EeCCEEEE
Confidence 4689999999999999999999999999999988653210 0 11245556778888899887 35678888
Q ss_pred EecCCC--EEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 137 IDAENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 137 id~~~~--~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
++.+++ .+.+ ++. .+.+|.||+|+|.+|+..
T Consensus 262 i~~~~~v~~v~~-~g~----------~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 262 VAGNGKVEKIIT-DKN----------EYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp EECSSSCCEEEE-SSC----------EEECSEEEECCCEEECCG
T ss_pred EEcCCcEEEEEE-CCc----------EEECCEEEECCCCCcChH
Confidence 876443 2433 332 899999999999998764
No 190
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.24 E-value=2.9e-06 Score=81.55 Aligned_cols=103 Identities=21% Similarity=0.280 Sum_probs=74.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
..++|+|||+|+.|+.+|..|...|.+|+++++.+.+.. ...+...+.+.+++.|+++ +.+..+..
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------~~~~~~~l~~~l~~~gv~i-~~~~~v~~ 209 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA-------------EKILIKRLMDKVENGNIIL-HTNRTLEE 209 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC-------------CHHHHHHHHHHHHTSSEEE-ECSCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc-------------CHHHHHHHHHhcccCCeEE-EcCceeEE
Confidence 357999999999999999999999999999998765321 1133344556677789776 35678888
Q ss_pred EecCCC---EEEEecCCccCCCC-CceEEeecCEEEEccCCCCCCC
Q 011476 137 IDAENK---KVYCRSSQNTNLNG-KEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 137 id~~~~---~v~~~~~~~~~~~~-~~~~~~~yd~lviAtG~~~~~~ 178 (485)
++.+.. .+.+.+.. + ++...+.+|.||+|+|..|+..
T Consensus 210 i~~~~~~v~~v~~~~~~-----~~g~~~~i~~D~vv~a~G~~p~~~ 250 (320)
T 1trb_A 210 VTGDQMGVTGVRLRDTQ-----NSDNIESLDVAGLFVAIGHSPNTA 250 (320)
T ss_dssp EEECSSSEEEEEEECCT-----TCCCCEEEECSEEEECSCEEESCG
T ss_pred EEcCCCceEEEEEEecc-----CCCceEEEEcCEEEEEeCCCCChH
Confidence 876652 25555421 1 2234799999999999988754
No 191
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.24 E-value=9e-07 Score=87.21 Aligned_cols=94 Identities=18% Similarity=0.390 Sum_probs=72.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~i 137 (485)
.++++|||+|+.|+.+|..|++.|.+|+++++.+.+. + ...++...+.+.+++.|+++ +.+.++..+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-----~-------~~~~~~~~l~~~l~~~gV~i-~~~~~v~~i 209 (367)
T 1xhc_A 143 SGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL-----G-------LDEELSNMIKDMLEETGVKF-FLNSELLEA 209 (367)
T ss_dssp HSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT-----T-------CCHHHHHHHHHHHHHTTEEE-ECSCCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec-----c-------CCHHHHHHHHHHHHHCCCEE-EcCCEEEEE
Confidence 3799999999999999999999999999999886532 1 11245556778888899876 356778888
Q ss_pred ecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCC
Q 011476 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (485)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~ 177 (485)
+. ..+.+.++ ++.+|.||+|+|..|+.
T Consensus 210 ~~--~~v~~~~g-----------~i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 210 NE--EGVLTNSG-----------FIEGKVKICAIGIVPNV 236 (367)
T ss_dssp CS--SEEEETTE-----------EEECSCEEEECCEEECC
T ss_pred Ee--eEEEECCC-----------EEEcCEEEECcCCCcCH
Confidence 73 45665432 38999999999998875
No 192
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.24 E-value=1.3e-06 Score=89.03 Aligned_cols=103 Identities=17% Similarity=0.200 Sum_probs=76.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++++|||||+.|+.+|..|+..|.+|+|+++.+.+. +. . ..++...+.+.+++.|+++ +.+..+..
T Consensus 170 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-----~~-----~-~~~~~~~l~~~l~~~gv~i-~~~~~v~~ 237 (464)
T 2a8x_A 170 LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL-----PN-----E-DADVSKEIEKQFKKLGVTI-LTATKVES 237 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-----TT-----S-CHHHHHHHHHHHHHHTCEE-ECSCEEEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc-----cc-----c-CHHHHHHHHHHHHHcCCEE-EeCcEEEE
Confidence 35799999999999999999999999999999886532 11 1 1244555777888889887 35778888
Q ss_pred EecCCCEE--EEe-cCCccCCCCCceEEeecCEEEEccCCCCCCCC
Q 011476 137 IDAENKKV--YCR-SSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (485)
Q Consensus 137 id~~~~~v--~~~-~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~ 179 (485)
++.+++.+ .+. ++ +...+.+|.||+|+|.+|+...
T Consensus 238 i~~~~~~~~v~~~~~g--------~~~~~~~D~vv~a~G~~p~~~~ 275 (464)
T 2a8x_A 238 IADGGSQVTVTVTKDG--------VAQELKAEKVLQAIGFAPNVEG 275 (464)
T ss_dssp EEECSSCEEEEEESSS--------CEEEEEESEEEECSCEEECCSS
T ss_pred EEEcCCeEEEEEEcCC--------ceEEEEcCEEEECCCCCccCCC
Confidence 87655433 333 22 1237999999999999987643
No 193
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.22 E-value=8.8e-07 Score=90.68 Aligned_cols=103 Identities=16% Similarity=0.210 Sum_probs=75.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~i 137 (485)
+++++|||||+.|+.+|..|++.|.+|+|+++.+.+.. . ...++...+.+.+++.|+++ +.+..+..+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~-----~------~~~~~~~~l~~~l~~~gV~i-~~~~~v~~i 252 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ-----G------ADRDLVKVWQKQNEYRFDNI-MVNTKTVAV 252 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST-----T------SCHHHHHHHHHHHGGGEEEE-ECSCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc-----c------cCHHHHHHHHHHHHhcCCEE-EECCEEEEE
Confidence 68999999999999999999999999999998865321 1 11244556777888889876 356788888
Q ss_pred ecCCCE--EEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 138 DAENKK--VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 138 d~~~~~--v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
+.+++. +.+.+.. ..++ .+.+|.||+|+|.+|+..
T Consensus 253 ~~~~~~~~v~~~~~~----~~g~--~~~~D~vv~a~G~~p~~~ 289 (482)
T 1ojt_A 253 EPKEDGVYVTFEGAN----APKE--PQRYDAVLVAAGRAPNGK 289 (482)
T ss_dssp EEETTEEEEEEESSS----CCSS--CEEESCEEECCCEEECGG
T ss_pred EEcCCeEEEEEeccC----CCce--EEEcCEEEECcCCCcCCC
Confidence 765543 4444300 0011 678999999999998763
No 194
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.22 E-value=1.6e-06 Score=91.03 Aligned_cols=98 Identities=17% Similarity=0.366 Sum_probs=78.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~i 137 (485)
+++++|||+|+.|+.+|..|+..|.+|+++++.+.+.. . ...++...+.+.+++.|+++ +.+..+..+
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----~------~~~~~~~~l~~~l~~~GV~i-~~~~~v~~i 254 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP-----P------IDYEMAAYVHEHMKNHDVEL-VFEDGVDAL 254 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-----T------SCHHHHHHHHHHHHHTTCEE-ECSCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc-----c------CCHHHHHHHHHHHHHcCCEE-EECCeEEEE
Confidence 57999999999999999999999999999998764321 1 11245556778888899887 356789999
Q ss_pred ecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCC
Q 011476 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (485)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~ 177 (485)
+.+.+.+.+.++. .+.+|.||+|+|.+|+.
T Consensus 255 ~~~~~~v~~~~g~----------~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 255 EENGAVVRLKSGS----------VIQTDMLILAIGVQPES 284 (588)
T ss_dssp EGGGTEEEETTSC----------EEECSEEEECSCEEECC
T ss_pred ecCCCEEEECCCC----------EEEcCEEEEccCCCCCh
Confidence 8776778776654 89999999999998875
No 195
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.21 E-value=5.9e-06 Score=80.95 Aligned_cols=93 Identities=23% Similarity=0.274 Sum_probs=73.2
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc---------------ccc----cHHHHHHH
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL---------------NMF----DKRITAFA 284 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l---------------~~~----~~~~~~~~ 284 (485)
.+|+|||||+.|+.+|..|.+. +.+|+|+++.+.+. +.+ ..++...+
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~--------------g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMN--------------NISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESL 80 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhC--------------CCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHH
Confidence 4899999999999999999885 68999999876431 111 25667778
Q ss_pred HHHHHhCCcEEEcCceEEEEeCC---cEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 285 EEKFSRDGIDVKLGSMVVKVTDK---EIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 285 ~~~l~~~gV~v~~~~~v~~v~~~---~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
.+.+++.|+++++++.|++++.+ .+.+.. .+|+. +.+|.||+|+|.
T Consensus 81 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~-~~g~~--~~~~~li~AtG~ 129 (360)
T 3ab1_A 81 WAQAERYNPDVVLNETVTKYTKLDDGTFETRT-NTGNV--YRSRAVLIAAGL 129 (360)
T ss_dssp HHHHHTTCCEEECSCCEEEEEECTTSCEEEEE-TTSCE--EEEEEEEECCTT
T ss_pred HHHHHHhCCEEEcCCEEEEEEECCCceEEEEE-CCCcE--EEeeEEEEccCC
Confidence 88888889999999999999742 344544 56654 899999999995
No 196
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.21 E-value=1e-06 Score=89.87 Aligned_cols=106 Identities=18% Similarity=0.261 Sum_probs=77.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.. . ...++...+.+.+++.|+++ +.+.++..
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~-----~------~~~~~~~~l~~~l~~~gv~i-~~~~~v~~ 243 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP-----T------MDAEIRKQFQRSLEKQGMKF-KLKTKVVG 243 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST-----T------SCHHHHHHHHHHHHHSSCCE-ECSEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-----c------ccHHHHHHHHHHHHHcCCEE-EeCCEEEE
Confidence 358999999999999999999999999999998865321 1 11245555778888899887 36778999
Q ss_pred EecCCC--EEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCC
Q 011476 137 IDAENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (485)
Q Consensus 137 id~~~~--~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~ 179 (485)
++.+++ .+.+.+.. +++...+.+|.||+|+|.+|+...
T Consensus 244 i~~~~~~~~v~~~~~~-----~g~~~~~~~D~vv~a~G~~p~~~~ 283 (470)
T 1dxl_A 244 VDTSGDGVKLTVEPSA-----GGEQTIIEADVVLVSAGRTPFTSG 283 (470)
T ss_dssp EECSSSSEEEEEEESS-----SCCCEEEEESEEECCCCEEECCTT
T ss_pred EEEcCCeEEEEEEecC-----CCcceEEECCEEEECCCCCcCCCC
Confidence 987654 33443210 111237999999999999987643
No 197
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.21 E-value=1.3e-05 Score=79.75 Aligned_cols=106 Identities=19% Similarity=0.248 Sum_probs=78.0
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc-----------------c------------
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-----------------M------------ 275 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~-----------------~------------ 275 (485)
+|+|||||+.|+.+|..+++. |.+|+|+++.+.+.. .
T Consensus 6 dViIIGgG~aGl~aA~~la~~--------------G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~ 71 (401)
T 2gqf_A 6 ENIIIGAGAAGLFCAAQLAKL--------------GKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFV 71 (401)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTST
T ss_pred CEEEECCcHHHHHHHHHHHhC--------------CCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHH
Confidence 799999999999999999986 689999988764310 0
Q ss_pred -----------------------------------ccHHHHHHHHHHHHhCCcEEEcCceEEEEe-C-----CcEEEEEc
Q 011476 276 -----------------------------------FDKRITAFAEEKFSRDGIDVKLGSMVVKVT-D-----KEIFTKVR 314 (485)
Q Consensus 276 -----------------------------------~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~-~-----~~v~~~~~ 314 (485)
...++...+.+.+++.||++++++.|+++. . +.+.+..
T Consensus 72 ~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~- 150 (401)
T 2gqf_A 72 KSALARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQV- 150 (401)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEE-
T ss_pred HHHHHhCCHHHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEE-
Confidence 123445667788888999999999999986 2 3455543
Q ss_pred CCCeEEEEecCeEEEccCCCCCcch------HHHHHHhCC
Q 011476 315 GNGETSSMPYGMVVWSTGIAPHAII------KDFMKQVGQ 348 (485)
Q Consensus 315 ~~G~~~~i~~D~vi~a~G~~~~p~~------~~l~~~~g~ 348 (485)
.+| ++.+|.||+|+|..+.|.+ ..+++.+|.
T Consensus 151 ~~g---~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~ 187 (401)
T 2gqf_A 151 NST---QWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGI 187 (401)
T ss_dssp TTE---EEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTC
T ss_pred CCC---EEECCEEEECCCCccCCCCCCChHHHHHHHHCCC
Confidence 444 3899999999996544432 256677775
No 198
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.21 E-value=6.8e-06 Score=80.66 Aligned_cols=96 Identities=14% Similarity=0.236 Sum_probs=71.6
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCc-eEEEEecCc---cc---------c-c-------c--------
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV-KITLLEAAD---HI---------L-N-------M-------- 275 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~-~Vtlv~~~~---~~---------l-~-------~-------- 275 (485)
+|+|||||+.|+.+|..|.+. |. +|+|+++.+ .+ + + .
T Consensus 6 ~vvIIGaG~aGl~aA~~l~~~--------------g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 71 (369)
T 3d1c_A 6 KVAIIGAGAAGIGMAITLKDF--------------GITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAIS 71 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSS
T ss_pred cEEEECcCHHHHHHHHHHHHc--------------CCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhcc
Confidence 799999999999999999986 57 899999875 00 0 0 0
Q ss_pred --------------ccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--cEEEEEcCCCeEEEEecCeEEEccCCCCCcc
Q 011476 276 --------------FDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGIAPHAI 338 (485)
Q Consensus 276 --------------~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~--~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~ 338 (485)
....+...+.+.+++.|+++++++.|++++.+ ...+.. .+|+ +.+|.||+|+|....|.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~-~~g~---~~~d~vVlAtG~~~~p~ 146 (369)
T 3d1c_A 72 MDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIAT-TTET---YHADYIFVATGDYNFPK 146 (369)
T ss_dssp TTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEE-SSCC---EEEEEEEECCCSTTSBC
T ss_pred ccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEe-CCCE---EEeCEEEECCCCCCccC
Confidence 01345566777888899999999999998743 455544 4453 88999999999544443
No 199
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.20 E-value=1.5e-06 Score=88.90 Aligned_cols=100 Identities=17% Similarity=0.286 Sum_probs=74.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++++|||||+.|+.+|..|++.|.+|+++++.+.+. +. . ..++...+.+.+++.|+++. .+.++..
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-----~~-----~-d~~~~~~l~~~l~~~Gv~i~-~~~~v~~ 251 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL-----RK-----F-DECIQNTITDHYVKEGINVH-KLSKIVK 251 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC-----TT-----S-CHHHHHHHHHHHHHHTCEEE-CSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc-----cc-----c-CHHHHHHHHHHHHhCCeEEE-eCCEEEE
Confidence 35799999999999999999999999999999886532 11 1 12445557778888898873 5678888
Q ss_pred EecCCC----EEEEecCCccCCCCCceEEeecCEEEEccCCCCCC
Q 011476 137 IDAENK----KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (485)
Q Consensus 137 id~~~~----~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~ 177 (485)
++.+++ .+.+.++ + ..+.+|.||+|+|.+|+.
T Consensus 252 i~~~~~~~~~~v~~~~G--------~-~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 252 VEKNVETDKLKIHMNDS--------K-SIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp EEECC-CCCEEEEETTS--------C-EEEEESEEEECSCEEECC
T ss_pred EEEcCCCcEEEEEECCC--------c-EEEEcCEEEECCCCCCcc
Confidence 876422 3444443 0 279999999999999876
No 200
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.20 E-value=2.6e-06 Score=86.46 Aligned_cols=100 Identities=14% Similarity=0.330 Sum_probs=75.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~i 137 (485)
+++++|||+|+.|+.+|..|+..|.+|+++++.+.+... . ...++...+.+.+++.|+++ +.++++..+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------~-~~~~~~~~l~~~l~~~Gv~i-~~~~~v~~i 217 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK---------Y-FDKEFTDILAKDYEAHGVNL-VLGSKVAAF 217 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT---------T-SCHHHHHHHHHHHHHTTCEE-EESSCEEEE
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh---------h-hhhhHHHHHHHHHHHCCCEE-EcCCeeEEE
Confidence 579999999999999999999999999999987653210 0 11245556778888999987 467788888
Q ss_pred ecCCCEEE-Ee-cCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 138 DAENKKVY-CR-SSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 138 d~~~~~v~-~~-~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
+.+++.+. +. ++. ++.+|.||+|+|.+|+..
T Consensus 218 ~~~~~~v~~v~~~g~----------~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 218 EEVDDEIITKTLDGK----------EIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp EEETTEEEEEETTSC----------EEEESEEEECCCEEECCG
T ss_pred EcCCCeEEEEEeCCC----------EEECCEEEECcCCCCCHH
Confidence 76444442 22 222 799999999999998754
No 201
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.20 E-value=3.4e-06 Score=85.53 Aligned_cols=104 Identities=16% Similarity=0.196 Sum_probs=77.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++++|||+|+.|+.+|..|.+.|.+|+++++.+.+... . ...++...+.+.+++.|+++ +.++.+..
T Consensus 146 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------~-~d~~~~~~l~~~l~~~GV~i-~~~~~v~~ 214 (452)
T 3oc4_A 146 NSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK---------Y-FDKEMVAEVQKSLEKQAVIF-HFEETVLG 214 (452)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT---------T-CCHHHHHHHHHHHHTTTEEE-EETCCEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc---------c-CCHHHHHHHHHHHHHcCCEE-EeCCEEEE
Confidence 3579999999999999999999999999999988653210 0 11245566778888899887 35678888
Q ss_pred EecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCCC
Q 011476 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNT 180 (485)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i 180 (485)
+...+..+.+... ++ .+.+|.||+|+|.+|+....
T Consensus 215 i~~~~~~v~v~~~------~g---~i~aD~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 215 IEETANGIVLETS------EQ---EISCDSGIFALNLHPQLAYL 249 (452)
T ss_dssp EEECSSCEEEEES------SC---EEEESEEEECSCCBCCCSSC
T ss_pred EEccCCeEEEEEC------CC---EEEeCEEEECcCCCCChHHH
Confidence 8754444444332 11 78999999999999876543
No 202
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.20 E-value=3.1e-06 Score=80.26 Aligned_cols=90 Identities=9% Similarity=0.015 Sum_probs=71.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
..++|+|||+|+.|+.+|..|...| +|+++++.+. .+...+.+.+++.|+++ ....+..
T Consensus 140 ~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~------------------~~~~~~~~~l~~~gv~i--~~~~v~~ 198 (297)
T 3fbs_A 140 DQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV------------------EPDADQHALLAARGVRV--ETTRIRE 198 (297)
T ss_dssp TTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC------------------CCCHHHHHHHHHTTCEE--ECSCEEE
T ss_pred cCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC------------------CCCHHHHHHHHHCCcEE--Ecceeee
Confidence 3579999999999999999999888 9999987643 12234567788889875 3578888
Q ss_pred EecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
++.++ .+.+.++. .+.+|.||+|+|..|+.+
T Consensus 199 i~~~~-~v~~~~g~----------~~~~D~vi~a~G~~p~~~ 229 (297)
T 3fbs_A 199 IAGHA-DVVLADGR----------SIALAGLFTQPKLRITVD 229 (297)
T ss_dssp EETTE-EEEETTSC----------EEEESEEEECCEEECCCS
T ss_pred eecCC-eEEeCCCC----------EEEEEEEEEccCcccCch
Confidence 88754 67776654 899999999999988653
No 203
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.20 E-value=1.7e-06 Score=88.69 Aligned_cols=100 Identities=15% Similarity=0.244 Sum_probs=75.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCC---CCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNP---SYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAE 133 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~---g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~ 133 (485)
.+++++|||+|+.|+.+|..|... |.+|+++++.+.+. +. . ..++...+.+.+++.|+++ +.+..
T Consensus 186 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-----~~-----~-d~~~~~~l~~~l~~~GV~i-~~~~~ 253 (490)
T 1fec_A 186 APKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL-----RG-----F-DSELRKQLTEQLRANGINV-RTHEN 253 (490)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS-----TT-----S-CHHHHHHHHHHHHHTTEEE-EETCC
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc-----cc-----c-CHHHHHHHHHHHHhCCCEE-EeCCE
Confidence 357999999999999999999877 99999999886532 11 1 1245556778888899887 35778
Q ss_pred EEEEecCC-C--EEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 134 CFKIDAEN-K--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 134 v~~id~~~-~--~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
+..++.++ + .+.+.++. .+.+|.||+|+|.+|+..
T Consensus 254 v~~i~~~~~~~~~v~~~~G~----------~i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 254 PAKVTKNADGTRHVVFESGA----------EADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp EEEEEECTTSCEEEEETTSC----------EEEESEEEECSCEEESCT
T ss_pred EEEEEEcCCCEEEEEECCCc----------EEEcCEEEEccCCCcCcc
Confidence 88887653 2 44444432 799999999999998764
No 204
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.20 E-value=2e-06 Score=88.26 Aligned_cols=100 Identities=19% Similarity=0.281 Sum_probs=75.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCC---CCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNP---SYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAE 133 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~---g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~ 133 (485)
.+++++|||+|+.|+.+|..|++. |.+|+|+++.+.+. +. + ..++...+.+.+++.|+++ +.+..
T Consensus 190 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-----~~-----~-d~~~~~~l~~~l~~~GV~i-~~~~~ 257 (495)
T 2wpf_A 190 PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL-----RG-----F-DETIREEVTKQLTANGIEI-MTNEN 257 (495)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC-----TT-----S-CHHHHHHHHHHHHHTTCEE-EESCC
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc-----cc-----c-CHHHHHHHHHHHHhCCCEE-EeCCE
Confidence 357999999999999999999877 99999999886532 11 1 1245556778888899887 36778
Q ss_pred EEEEecCC-C--EEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 134 CFKIDAEN-K--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 134 v~~id~~~-~--~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
+..++.++ + .+.+.++. .+.+|.||+|+|.+|+..
T Consensus 258 v~~i~~~~~~~~~v~~~~G~----------~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 258 PAKVSLNTDGSKHVTFESGK----------TLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp EEEEEECTTSCEEEEETTSC----------EEEESEEEECSCEEECCG
T ss_pred EEEEEEcCCceEEEEECCCc----------EEEcCEEEECCCCccccc
Confidence 88887653 2 45554433 799999999999998763
No 205
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.20 E-value=1.8e-06 Score=89.13 Aligned_cols=102 Identities=19% Similarity=0.173 Sum_probs=77.7
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEE
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~ 135 (485)
..+++++|||||+.|+.+|..+++.|.+|||+++... ++.. ..++...+.+.+++.|++++ ....+.
T Consensus 221 ~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~------L~~~------D~ei~~~l~~~l~~~gi~~~-~~~~v~ 287 (542)
T 4b1b_A 221 KDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIV------LRGF------DQQCAVKVKLYMEEQGVMFK-NGILPK 287 (542)
T ss_dssp SCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCS------STTS------CHHHHHHHHHHHHHTTCEEE-ETCCEE
T ss_pred cCCceEEEECCCHHHHHHHHHHHhcCCeEEEeccccc------cccc------chhHHHHHHHHHHhhcceee-cceEEE
Confidence 3468999999999999999999999999999986532 1111 12566678888999998873 567788
Q ss_pred EEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
.+...+..+.+.... + ..+.+|.|++|+|-+|+..
T Consensus 288 ~~~~~~~~~~v~~~~-----~---~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 288 KLTKMDDKILVEFSD-----K---TSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp EEEEETTEEEEEETT-----S---CEEEESEEEECSCEEESCG
T ss_pred EEEecCCeEEEEEcC-----C---CeEEEEEEEEcccccCCcc
Confidence 887776766654322 1 1778999999999999864
No 206
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.19 E-value=1.9e-06 Score=88.09 Aligned_cols=101 Identities=14% Similarity=0.209 Sum_probs=74.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. . ...++...+.+.+++.|+++ +.+..+..
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----~------~~~~~~~~l~~~l~~~Gv~i-~~~~~v~~ 252 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT-----I------YDGDMAEYIYKEADKHHIEI-LTNENVKA 252 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS-----S------SCHHHHHHHHHHHHHTTCEE-ECSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh-----c------CCHHHHHHHHHHHHHcCcEE-EcCCEEEE
Confidence 468999999999999999999999999999998764321 0 11245556778888899886 35678888
Q ss_pred EecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
++.+++...+... + ..+.+|.||+|+|..|+..
T Consensus 253 i~~~~~v~~v~~~------~---~~i~~D~vi~a~G~~p~~~ 285 (480)
T 3cgb_A 253 FKGNERVEAVETD------K---GTYKADLVLVSVGVKPNTD 285 (480)
T ss_dssp EEESSBEEEEEET------T---EEEECSEEEECSCEEESCG
T ss_pred EEcCCcEEEEEEC------C---CEEEcCEEEECcCCCcChH
Confidence 8766443222221 1 2799999999999988754
No 207
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.19 E-value=2e-06 Score=87.59 Aligned_cols=104 Identities=13% Similarity=0.183 Sum_probs=75.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHH-hhCCCeEEEEEeEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIV-RKKNVDICFWEAECF 135 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gv~v~~~~~~v~ 135 (485)
.+++++|||+|+.|+.+|..|++.|.+|+++++.+.+. +. ...++...+.+.+ ++.|+++ +.+.++.
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-----~~------~d~~~~~~l~~~l~~~~gv~i-~~~~~v~ 240 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA-----PT------LDEDVTNALVGALAKNEKMKF-MTSTKVV 240 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-----TT------SCHHHHHHHHHHHHHHTCCEE-ECSCEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc-----cc------CCHHHHHHHHHHHhhcCCcEE-EeCCEEE
Confidence 35799999999999999999999999999999886532 11 1124555677788 8899887 3567888
Q ss_pred EEecCCC--EEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 136 KIDAENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 136 ~id~~~~--~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
.++.+++ .+.+.+. +++...+.+|.||+|+|.+|+..
T Consensus 241 ~i~~~~~~~~v~~~~~------~g~~~~i~~D~vv~a~G~~p~~~ 279 (468)
T 2qae_A 241 GGTNNGDSVSLEVEGK------NGKRETVTCEALLVSVGRRPFTG 279 (468)
T ss_dssp EEEECSSSEEEEEECC---------EEEEEESEEEECSCEEECCT
T ss_pred EEEEcCCeEEEEEEcC------CCceEEEECCEEEECCCcccCCC
Confidence 8876553 3344310 11123799999999999998764
No 208
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.18 E-value=5e-06 Score=84.22 Aligned_cols=100 Identities=22% Similarity=0.462 Sum_probs=69.9
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc------ccc------cHHHHHHHHHHH-Hh
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL------NMF------DKRITAFAEEKF-SR 290 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l------~~~------~~~~~~~~~~~l-~~ 290 (485)
++|+|||||+.|+.+|..|.+.+ ++.+|+++++.+.+. +.+ ...+.....+.+ ++
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~------------~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 71 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLK------------PEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKK 71 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSSSCCC------------------------CTHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHHhC------------cCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHh
Confidence 48999999999999999999863 367999999987531 110 111112222333 67
Q ss_pred CCcEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcch
Q 011476 291 DGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAII 339 (485)
Q Consensus 291 ~gV~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~ 339 (485)
.||++++++++++++.+...+.. .+|+ .++.+|.+|+||| ..|..
T Consensus 72 ~gi~v~~~~~v~~i~~~~~~v~~-~~g~-~~~~~d~lviAtG--~~p~~ 116 (449)
T 3kd9_A 72 RGIDLHLNAEVIEVDTGYVRVRE-NGGE-KSYEWDYLVFANG--ASPQV 116 (449)
T ss_dssp TTCEEETTCEEEEECSSEEEEEC-SSSE-EEEECSEEEECCC--EEECC
T ss_pred cCcEEEecCEEEEEecCCCEEEE-CCce-EEEEcCEEEECCC--CCCCC
Confidence 89999999999999887765543 4453 2489999999999 55543
No 209
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.18 E-value=4e-06 Score=88.77 Aligned_cols=37 Identities=19% Similarity=0.349 Sum_probs=33.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCC-CCCcEEEEcCCCCc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNN-PSYDVQVISPRNYF 93 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~-~g~~V~lie~~~~~ 93 (485)
..++|+||||||+|+++|..|++ .|++|+|||+.+..
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~ 68 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGP 68 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 35799999999999999999999 99999999987643
No 210
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.17 E-value=7.9e-06 Score=78.54 Aligned_cols=98 Identities=20% Similarity=0.243 Sum_probs=71.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~i 137 (485)
.++|+|||+|+.|+.+|..|...+.+|+++++.+.+.. ...+.+.+.+.|+++ +.+.++..+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~-----------------~~~l~~~l~~~gv~i-~~~~~v~~i 216 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC-----------------ENAYVQEIKKRNIPY-IMNAQVTEI 216 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS-----------------CHHHHHHHHHTTCCE-ECSEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC-----------------CHHHHHHHhcCCcEE-EcCCeEEEE
Confidence 47999999999999999999999999999998765321 012344556789887 367788888
Q ss_pred ecCCC---EEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 138 DAENK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 138 d~~~~---~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
+.++. .+.+.+.. +++...+.+|.||+|+|..|+..
T Consensus 217 ~~~~~~v~~v~~~~~~-----~g~~~~i~~D~vi~a~G~~p~~~ 255 (319)
T 3cty_A 217 VGDGKKVTGVKYKDRT-----TGEEKLIETDGVFIYVGLIPQTS 255 (319)
T ss_dssp EESSSSEEEEEEEETT-----TCCEEEECCSEEEECCCEEECCG
T ss_pred ecCCceEEEEEEEEcC-----CCceEEEecCEEEEeeCCccChH
Confidence 77644 45554211 12234789999999999988753
No 211
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.16 E-value=8.3e-06 Score=82.53 Aligned_cols=102 Identities=19% Similarity=0.190 Sum_probs=72.7
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCc--eEEEEecCccccc-----c---------------------
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV--KITLLEAADHILN-----M--------------------- 275 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~--~Vtlv~~~~~~l~-----~--------------------- 275 (485)
++|+|||||+.|+.+|..|.+. |. +|+++++.+.+.. .
T Consensus 7 ~dV~IIGaG~aGl~aA~~L~~~--------------G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~ 72 (447)
T 2gv8_A 7 RKIAIIGAGPSGLVTAKALLAE--------------KAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIV 72 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--------------TCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBC
T ss_pred CEEEEECccHHHHHHHHHHHhc--------------CCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccc
Confidence 4899999999999999999986 56 9999998753210 0
Q ss_pred --------------------------c--------------cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEE
Q 011476 276 --------------------------F--------------DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKV 313 (485)
Q Consensus 276 --------------------------~--------------~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~ 313 (485)
+ ...+.+++.+.+++.++.++++++|++++. +...+..
T Consensus 73 ~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~ 152 (447)
T 2gv8_A 73 GPAALPVYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTY 152 (447)
T ss_dssp CSSSCCBCCCCCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEE
T ss_pred cccccCCccCchhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEE
Confidence 0 124556667777777888999999999964 3333332
Q ss_pred --cCCCe-EEEEecCeEEEccCCCCCcch
Q 011476 314 --RGNGE-TSSMPYGMVVWSTGIAPHAII 339 (485)
Q Consensus 314 --~~~G~-~~~i~~D~vi~a~G~~~~p~~ 339 (485)
..+|+ ..++.+|.||+|+|....|+.
T Consensus 153 ~~~~~G~~~~~~~~d~VVvAtG~~s~p~~ 181 (447)
T 2gv8_A 153 KGTKAGSPISKDIFDAVSICNGHYEVPYI 181 (447)
T ss_dssp EESSTTCCEEEEEESEEEECCCSSSSBCB
T ss_pred eecCCCCeeEEEEeCEEEECCCCCCCCCC
Confidence 12365 335899999999996445554
No 212
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.16 E-value=1e-05 Score=77.30 Aligned_cols=92 Identities=17% Similarity=0.205 Sum_probs=70.3
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCc--ccc--------cc----ccHHHHHHHHHHHHh
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD--HIL--------NM----FDKRITAFAEEKFSR 290 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~--~~l--------~~----~~~~~~~~~~~~l~~ 290 (485)
+|+|||||+.|+.+|..|.+. |.+|+++++.. .+. .. ...++...+.+.+++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~--------------g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARK--------------GIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDE 68 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTT--------------TCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHT
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHH
Confidence 799999999999999999986 68999997532 111 00 124677788888889
Q ss_pred CCcEEEcCceEEEEeCC-----cEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 291 DGIDVKLGSMVVKVTDK-----EIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 291 ~gV~v~~~~~v~~v~~~-----~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
.|++++.+++++.++.+ ...+.. .+|+. +.+|.+|+|+|.
T Consensus 69 ~~v~~~~~~~v~~i~~~~~~~~~~~v~~-~~g~~--~~~~~lv~AtG~ 113 (310)
T 1fl2_A 69 YDVDVIDSQSASKLIPAAVEGGLHQIET-ASGAV--LKARSIIVATGA 113 (310)
T ss_dssp SCEEEECSCCEEEEECCSSTTCCEEEEE-TTSCE--EEEEEEEECCCE
T ss_pred cCCeEEccCEEEEEEecccCCceEEEEE-CCCCE--EEeCEEEECcCC
Confidence 99999999999999642 344443 56754 899999999994
No 213
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.16 E-value=2.4e-06 Score=86.90 Aligned_cols=102 Identities=15% Similarity=0.272 Sum_probs=74.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~i 137 (485)
+++++|||||+.|+.+|..|++.|.+|+|+++.+.+.. . + ..++...+.+.+++.|+++ +.+..+..+
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~-----~-----~-~~~~~~~l~~~l~~~gv~i-~~~~~v~~i 233 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF-----Q-----F-DPLLSATLAENMHAQGIET-HLEFAVAAL 233 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----T-----S-CHHHHHHHHHHHHHTTCEE-ESSCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc-----c-----c-CHHHHHHHHHHHHHCCCEE-EeCCEEEEE
Confidence 57999999999999999999999999999998865321 1 1 1134455677788899887 356778888
Q ss_pred ecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
+.+++.+.+... +++. .+.+|.||+|+|.+|+..
T Consensus 234 ~~~~~~~~v~~~------~G~~-~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 234 ERDAQGTTLVAQ------DGTR-LEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp EEETTEEEEEET------TCCE-EEEESEEEECSCEEESCT
T ss_pred EEeCCeEEEEEe------CCcE-EEEcCEEEECCCCCcCCC
Confidence 765433333321 1111 689999999999998764
No 214
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.15 E-value=3.1e-05 Score=80.82 Aligned_cols=54 Identities=28% Similarity=0.275 Sum_probs=39.6
Q ss_pred HHHHHHHHHHhCCcEEEcCceEEEEe--C-CcEEEEEc--CCCeEEEEecCeEEEccCC
Q 011476 280 ITAFAEEKFSRDGIDVKLGSMVVKVT--D-KEIFTKVR--GNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 280 ~~~~~~~~l~~~gV~v~~~~~v~~v~--~-~~v~~~~~--~~G~~~~i~~D~vi~a~G~ 333 (485)
+...+.+.+++.||++++++.|+++. + +.+..+.. .+|+..++.+|.||+|+|-
T Consensus 252 l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg 310 (566)
T 1qo8_A 252 IIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGG 310 (566)
T ss_dssp HHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCC
Confidence 34556677788899999999999985 3 34432221 3677656999999999994
No 215
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.15 E-value=4.5e-06 Score=85.20 Aligned_cols=103 Identities=21% Similarity=0.293 Sum_probs=77.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++++|||+|+.|+.+|..|+..|.+|+++++.+.+.. . ...++...+.+.+++.|+++ +.+..+..
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----~------~~~~~~~~l~~~l~~~Gv~v-~~~~~v~~ 246 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP-----A------VDEQVAKEAQKILTKQGLKI-LLGARVTG 246 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-----T------SCHHHHHHHHHHHHHTTEEE-EETCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc-----c------cCHHHHHHHHHHHHhCCCEE-EECCEEEE
Confidence 467999999999999999999999999999998865321 1 11245566778888899887 35778888
Q ss_pred EecCCCE--EEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 137 IDAENKK--VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 137 id~~~~~--v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
++.+++. +.+.++. +...+.+|.||+|+|..|+..
T Consensus 247 i~~~~~~~~v~~~~~~-------g~~~~~~D~vi~a~G~~p~~~ 283 (476)
T 3lad_A 247 TEVKNKQVTVKFVDAE-------GEKSQAFDKLIVAVGRRPVTT 283 (476)
T ss_dssp EEECSSCEEEEEESSS-------EEEEEEESEEEECSCEEECCT
T ss_pred EEEcCCEEEEEEEeCC-------CcEEEECCEEEEeeCCcccCC
Confidence 8765543 4444321 124799999999999998764
No 216
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.14 E-value=3.6e-06 Score=86.33 Aligned_cols=106 Identities=15% Similarity=0.178 Sum_probs=78.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++|+|||||+.|+.+|..|+..|.+|+++++.+.+.. . ...++...+.+.+++.|+++ +.+.++..
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----~------~d~~~~~~l~~~l~~~gV~v-~~~~~v~~ 264 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG-----G------MDGEVAKQLQRMLTKQGIDF-KLGAKVTG 264 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS-----S------SCHHHHHHHHHHHHHTTCEE-ECSEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc-----c------CCHHHHHHHHHHHHhCCCEE-EECCeEEE
Confidence 367999999999999999999999999999998865421 0 11245556778888899887 35678888
Q ss_pred EecCCCEE--EEecCCccCCCCCceEEeecCEEEEccCCCCCCCC
Q 011476 137 IDAENKKV--YCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (485)
Q Consensus 137 id~~~~~v--~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~ 179 (485)
+..+++.+ .+.+.. +++...+.+|.||+|+|..|+...
T Consensus 265 i~~~~~~~~v~~~~~~-----~g~~~~i~~D~Vi~a~G~~p~~~~ 304 (491)
T 3urh_A 265 AVKSGDGAKVTFEPVK-----GGEATTLDAEVVLIATGRKPSTDG 304 (491)
T ss_dssp EEEETTEEEEEEEETT-----SCCCEEEEESEEEECCCCEECCTT
T ss_pred EEEeCCEEEEEEEecC-----CCceEEEEcCEEEEeeCCccCCCc
Confidence 87665543 343311 122348999999999999987643
No 217
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.14 E-value=1e-05 Score=77.95 Aligned_cols=99 Identities=23% Similarity=0.239 Sum_probs=70.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~i 137 (485)
.++|+|||+|+.|+.+|..|...|.+|+++++.+.+... ..+ .+++.++.|+++ +.+..+..+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-------------~~~---~~~l~~~~gv~i-~~~~~v~~i 214 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRAN-------------KVA---QARAFANPKMKF-IWDTAVEEI 214 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSC-------------HHH---HHHHHTCTTEEE-ECSEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCcc-------------hHH---HHHHHhcCCceE-ecCCceEEE
Confidence 479999999999999999999999999999987653210 011 223344468776 356788888
Q ss_pred ecCCC--EEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 138 DAENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 138 d~~~~--~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
+.+++ .+.+.+.. +++...+.+|.||+|+|..|+..
T Consensus 215 ~~~~~v~~v~~~~~~-----~g~~~~i~~D~vi~a~G~~p~~~ 252 (325)
T 2q7v_A 215 QGADSVSGVKLRNLK-----TGEVSELATDGVFIFIGHVPNTA 252 (325)
T ss_dssp EESSSEEEEEEEETT-----TCCEEEEECSEEEECSCEEESCG
T ss_pred ccCCcEEEEEEEECC-----CCcEEEEEcCEEEEccCCCCChH
Confidence 77544 45655311 22234789999999999988753
No 218
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.14 E-value=1.1e-05 Score=78.11 Aligned_cols=99 Identities=15% Similarity=0.236 Sum_probs=72.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccch-HHHHhhCCCeEEEEEeEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPV-RNIVRKKNVDICFWEAECF 135 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~gv~v~~~~~~v~ 135 (485)
..++|+|||+|+.|+.+|..|...|.+|+++++.+.+.. ...+ .+++++.|+++ +.+..+.
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~-----------------~~~~~~~~~~~~gv~i-~~~~~v~ 219 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA-----------------SKIMQQRALSNPKIDV-IWNSSVV 219 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS-----------------CHHHHHHHHTCTTEEE-ECSEEEE
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc-----------------cHHHHHHHHhCCCeeE-ecCCceE
Confidence 457999999999999999999999999999998865421 0112 24556778776 3567888
Q ss_pred EEecCC---C--EEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 136 KIDAEN---K--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 136 ~id~~~---~--~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
.++.+. + .+.+.+.. +++...+.+|.||+|+|..|+..
T Consensus 220 ~i~~~~~~~~v~~v~~~~~~-----~g~~~~i~~D~vi~a~G~~p~~~ 262 (333)
T 1vdc_A 220 EAYGDGERDVLGGLKVKNVV-----TGDVSDLKVSGLFFAIGHEPATK 262 (333)
T ss_dssp EEEESSSSSSEEEEEEEETT-----TCCEEEEECSEEEECSCEEESCG
T ss_pred EEeCCCCccceeeEEEEecC-----CCceEEEecCEEEEEeCCccchH
Confidence 887765 2 36665421 12234899999999999988754
No 219
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.13 E-value=3e-06 Score=86.35 Aligned_cols=99 Identities=15% Similarity=0.227 Sum_probs=75.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~i 137 (485)
+++++|||+|+.|+.+|..|++.|.+|+++++.+.+. + . ..++...+.+.+++.|+++ +.+..+..+
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-----~-~------~~~~~~~l~~~l~~~Gv~i-~~~~~v~~i 242 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF-----R-E------DPAIGEAVTAAFRAEGIEV-LEHTQASQV 242 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-----T-S------CHHHHHHHHHHHHHTTCEE-ETTCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC-----C-C------CHHHHHHHHHHHHhCCCEE-EcCCEEEEE
Confidence 5799999999999999999999999999999876432 1 0 1245566778888899886 356788888
Q ss_pred ecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
+.++..+.+... + ..+.+|.||+|+|.+|+..
T Consensus 243 ~~~~~~~~v~~~------~---~~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 243 AHMDGEFVLTTT------H---GELRADKLLVATGRTPNTR 274 (467)
T ss_dssp EEETTEEEEEET------T---EEEEESEEEECSCEEESCT
T ss_pred EEeCCEEEEEEC------C---cEEEcCEEEECCCCCcCCC
Confidence 766554443321 1 2799999999999998753
No 220
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.13 E-value=1.3e-05 Score=76.66 Aligned_cols=95 Identities=20% Similarity=0.204 Sum_probs=70.8
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEE-EecCccc------------ccccc-----HHHHHHHH
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITL-LEAADHI------------LNMFD-----KRITAFAE 285 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtl-v~~~~~~------------l~~~~-----~~~~~~~~ 285 (485)
++|+|||||+.|+.+|..|.+. +.+|++ +++. .+ .+.++ .++...+.
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~--------------g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRG--------------GLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWS 69 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH--------------TCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHC--------------CCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHH
Confidence 4899999999999999999986 689999 8873 21 12222 57778888
Q ss_pred HHHHhCCcEEEcCceEEEE-eC--CcEEEEEcCCCeEEEEecCeEEEccCCCCCcch
Q 011476 286 EKFSRDGIDVKLGSMVVKV-TD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAII 339 (485)
Q Consensus 286 ~~l~~~gV~v~~~~~v~~v-~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~ 339 (485)
+.+++.|++++.+ .+.++ ++ +.+.+....++ ++.+|.+|+|+| ..|+.
T Consensus 70 ~~~~~~~v~~~~~-~v~~i~~~~~~~~~v~~~~~~---~~~~d~lvlAtG--~~~~~ 120 (315)
T 3r9u_A 70 EQCMRFGLKHEMV-GVEQILKNSDGSFTIKLEGGK---TELAKAVIVCTG--SAPKK 120 (315)
T ss_dssp HHHTTTCCEEECC-CEEEEEECTTSCEEEEETTSC---EEEEEEEEECCC--EEECC
T ss_pred HHHHHcCcEEEEE-EEEEEecCCCCcEEEEEecCC---EEEeCEEEEeeC--CCCCC
Confidence 8999999999998 78888 43 34553122333 499999999999 45543
No 221
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.13 E-value=3.5e-06 Score=87.47 Aligned_cols=34 Identities=24% Similarity=0.314 Sum_probs=31.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCC---CCCcEEEEcCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNN---PSYDVQVISPRN 91 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~---~g~~V~lie~~~ 91 (485)
.++|+|||||++|+++|..|++ .|++|+|||+.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 5799999999999999999998 999999999864
No 222
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.13 E-value=3.2e-06 Score=86.24 Aligned_cols=99 Identities=21% Similarity=0.345 Sum_probs=75.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC-CCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNP-SYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~-g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
+++++|||+|+.|+.+|..|+.. |.+|+++++.+.+... . ...++...+.+.+++.|+++. .+..+..
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~---------~-~~~~~~~~l~~~l~~~GV~i~-~~~~v~~ 227 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG---------F-TSKSLSQMLRHDLEKNDVVVH-TGEKVVR 227 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT---------T-SCHHHHHHHHHHHHHTTCEEE-CSCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc---------c-cCHHHHHHHHHHHHhcCCEEE-eCCEEEE
Confidence 57999999999999999999988 9999999987643210 0 112455667788888998873 5678888
Q ss_pred EecCCCE--EEEecCCccCCCCCceEEeecCEEEEccCCCCCC
Q 011476 137 IDAENKK--VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (485)
Q Consensus 137 id~~~~~--v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~ 177 (485)
++.++.. +.+.++. .+.+|.||+|+|.+|+.
T Consensus 228 i~~~~~~v~v~~~~g~----------~i~aD~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 228 LEGENGKVARVITDKR----------TLDADLVILAAGVSPNT 260 (472)
T ss_dssp EEESSSBEEEEEESSC----------EEECSEEEECSCEEECC
T ss_pred EEccCCeEEEEEeCCC----------EEEcCEEEECCCCCcCH
Confidence 8875443 4444443 89999999999998874
No 223
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.12 E-value=9.2e-06 Score=84.12 Aligned_cols=37 Identities=27% Similarity=0.347 Sum_probs=33.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA 94 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~ 94 (485)
..+||||||||+||++||+.|++ |.+|+|+|+.+..+
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~ 43 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTE 43 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCC
Confidence 35799999999999999999999 99999999987543
No 224
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.12 E-value=5.8e-06 Score=86.31 Aligned_cols=102 Identities=18% Similarity=0.262 Sum_probs=73.0
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc---ccc-----------HHHHHHHHHHHH
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN---MFD-----------KRITAFAEEKFS 289 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~---~~~-----------~~~~~~~~~~l~ 289 (485)
++|+|||||+.|+.+|..|.+.+ ++.+|+++++.+.+.- .++ ..+........+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~------------~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 69 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLS------------ETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKA 69 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------SSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhhC------------cCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHH
Confidence 38999999999999999999863 3689999999876410 010 011122334444
Q ss_pred hCCcEEEcCceEEEEeCC--cEEEEEcCCCeEEEEecCeEEEccCCCCCcch
Q 011476 290 RDGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGIAPHAII 339 (485)
Q Consensus 290 ~~gV~v~~~~~v~~v~~~--~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~ 339 (485)
+.||+++++++|++++.+ .+.+....+|+..++.+|.||+||| ..|..
T Consensus 70 ~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG--~~p~~ 119 (565)
T 3ntd_A 70 RFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPG--AAPIV 119 (565)
T ss_dssp HHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCC--EEECC
T ss_pred hcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCC--CCCCC
Confidence 579999999999999864 3555554456655699999999999 45543
No 225
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.11 E-value=4e-06 Score=83.51 Aligned_cols=35 Identities=20% Similarity=0.332 Sum_probs=32.3
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCc
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~ 93 (485)
.||+||||||+|+++|..|++.|++|+|+|+.+.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 58999999999999999999999999999987643
No 226
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.11 E-value=4.9e-06 Score=87.29 Aligned_cols=35 Identities=17% Similarity=0.214 Sum_probs=32.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCC--CcEEEEcCCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPS--YDVQVISPRNY 92 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g--~~V~lie~~~~ 92 (485)
.+||||||||+||+++|+.|++.| .+|+|||+.+.
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~ 41 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYP 41 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCC
Confidence 469999999999999999999888 99999998754
No 227
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.11 E-value=3.8e-06 Score=86.12 Aligned_cols=106 Identities=17% Similarity=0.170 Sum_probs=75.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. . ...++...+.+.+++. +++. .+..+..
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~--~---------~d~~~~~~l~~~l~~~-V~i~-~~~~v~~ 239 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN--L---------QDEEMKRYAEKTFNEE-FYFD-AKARVIS 239 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT--C---------CCHHHHHHHHHHHHTT-SEEE-TTCEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc--c---------CCHHHHHHHHHHHhhC-cEEE-ECCEEEE
Confidence 368999999999999999999999999999998876421 1 0124455566677766 7763 5778888
Q ss_pred EecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCC
Q 011476 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (485)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~ 179 (485)
+..+++.+.+.... .+++...+.+|.||+|+|..|+...
T Consensus 240 i~~~~~~v~v~~~~----~~G~~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 240 TIEKEDAVEVIYFD----KSGQKTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp EEECSSSEEEEEEC----TTCCEEEEEESEEEECSCCEESCSS
T ss_pred EEEcCCEEEEEEEe----CCCceEEEECCEEEEeeCCccCCCC
Confidence 87655444333210 0122348999999999999987654
No 228
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.10 E-value=2.6e-05 Score=81.51 Aligned_cols=56 Identities=9% Similarity=0.028 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEeC---CcEE---EEEcCCCeEEEEecCeEEEccCC
Q 011476 278 KRITAFAEEKFSRDGIDVKLGSMVVKVTD---KEIF---TKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 278 ~~~~~~~~~~l~~~gV~v~~~~~v~~v~~---~~v~---~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
..+...+.+.+++.||+|++++.++++.. +.+. +....+|+...+.++.||+|+|-
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg 204 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGG 204 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCC
Confidence 46667778888889999999999999852 3343 33335676666999999999993
No 229
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.10 E-value=2.9e-05 Score=78.53 Aligned_cols=108 Identities=16% Similarity=0.312 Sum_probs=77.8
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc-------------------c----------
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-------------------M---------- 275 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~-------------------~---------- 275 (485)
.|+|||||+.|+-+|..|++. |.+|+|+++.+.+.. .
T Consensus 28 dVvIIGgG~aGl~aA~~la~~--------------G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~ 93 (447)
T 2i0z_A 28 DVIVIGGGPSGLMAAIGAAEE--------------GANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGR 93 (447)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGG
T ss_pred CEEEECCcHHHHHHHHHHHHC--------------CCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChH
Confidence 799999999999999999986 688999987653210 0
Q ss_pred ---------------------------------c-----cHHHHHHHHHHHHhCCcEEEcCceEEEEe--CCcEEEEEcC
Q 011476 276 ---------------------------------F-----DKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRG 315 (485)
Q Consensus 276 ---------------------------------~-----~~~~~~~~~~~l~~~gV~v~~~~~v~~v~--~~~v~~~~~~ 315 (485)
+ ...+...+.+.+++.||+++++++|+++. ++.+..+...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~ 173 (447)
T 2i0z_A 94 FLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQ 173 (447)
T ss_dssp GGHHHHHHSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET
T ss_pred HHHHHHHhcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEEC
Confidence 0 12344566777788999999999999985 3443444446
Q ss_pred CCeEEEEecCeEEEccCCCCCcch------HHHHHHhCC
Q 011476 316 NGETSSMPYGMVVWSTGIAPHAII------KDFMKQVGQ 348 (485)
Q Consensus 316 ~G~~~~i~~D~vi~a~G~~~~p~~------~~l~~~~g~ 348 (485)
+|+. +.+|.||+|+|....|.. ..+++.+|+
T Consensus 174 ~G~~--i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~ 210 (447)
T 2i0z_A 174 TGEV--LETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGH 210 (447)
T ss_dssp TCCE--EECSCEEECCCCSSSGGGSCSSHHHHHHHHTTC
T ss_pred CCCE--EECCEEEECCCCCcCCCCCCCcHHHHHHHHCCC
Confidence 6764 899999999996443321 145667765
No 230
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.09 E-value=1.3e-05 Score=77.67 Aligned_cols=100 Identities=12% Similarity=0.186 Sum_probs=72.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccch-HHHHhhCCCeEEEEEeEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPV-RNIVRKKNVDICFWEAECF 135 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~gv~v~~~~~~v~ 135 (485)
..++|+|||+|+.|+.+|..|+..+.+|+++++.+.+.. ...+ .+++++.|+++ +.+..+.
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~-----------------~~~~~~~~~~~~gV~v-~~~~~v~ 215 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA-----------------SKIMLDRARNNDKIRF-LTNHTVV 215 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS-----------------CTTHHHHHHHCTTEEE-ECSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc-----------------cHHHHHHHhccCCcEE-EeCceeE
Confidence 357999999999999999999999999999998765421 0112 24456778776 3577888
Q ss_pred EEecCCC--EEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCC
Q 011476 136 KIDAENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (485)
Q Consensus 136 ~id~~~~--~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~ 179 (485)
.++.+++ .+.+.+.. +++...+.+|.||+|+|..|+..-
T Consensus 216 ~i~~~~~~~~v~~~~~~-----~g~~~~i~~D~vi~a~G~~p~~~~ 256 (335)
T 2a87_A 216 AVDGDTTVTGLRVRDTN-----TGAETTLPVTGVFVAIGHEPRSGL 256 (335)
T ss_dssp EEECSSSCCEEEEEEET-----TSCCEEECCSCEEECSCEEECCTT
T ss_pred EEecCCcEeEEEEEEcC-----CCceEEeecCEEEEccCCccChhH
Confidence 8887653 36665321 112247999999999999987643
No 231
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.08 E-value=2.3e-06 Score=86.27 Aligned_cols=98 Identities=21% Similarity=0.332 Sum_probs=70.7
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccccc--c---------cHHHHHHHHHHHHhCC
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM--F---------DKRITAFAEEKFSRDG 292 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~--~---------~~~~~~~~~~~l~~~g 292 (485)
++|+|||||+.|+.+|..|.+++ .+.+|+|+++.+.+... + ..++...+.+.+++.|
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~------------~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g 70 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLM------------PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN 70 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT
T ss_pred CCEEEECccHHHHHHHHHHHcCC------------CCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcC
Confidence 38999999999999999999842 36899999998865321 1 1112222345567789
Q ss_pred cEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcch
Q 011476 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAII 339 (485)
Q Consensus 293 V~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~ 339 (485)
|+++.+ .++.++.+...+.. .+|++ +.+|.+|+|+| ..|+.
T Consensus 71 v~~~~~-~v~~id~~~~~v~~-~~g~~--i~~d~liiAtG--~~~~~ 111 (430)
T 3h28_A 71 IEFINE-KAESIDPDANTVTT-QSGKK--IEYDYLVIATG--PKLVF 111 (430)
T ss_dssp EEEECS-CEEEEETTTTEEEE-TTCCE--EECSEEEECCC--CEEEC
T ss_pred CEEEEE-EEEEEECCCCEEEE-CCCcE--EECCEEEEcCC--ccccc
Confidence 999975 89999875434433 45664 89999999999 55554
No 232
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.08 E-value=2.4e-05 Score=74.81 Aligned_cols=91 Identities=22% Similarity=0.272 Sum_probs=69.2
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCc-eEEEEecCcc---c--------cccc-----cHHHHHHHHHH
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV-KITLLEAADH---I--------LNMF-----DKRITAFAEEK 287 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~-~Vtlv~~~~~---~--------l~~~-----~~~~~~~~~~~ 287 (485)
+|+|||||+.|+.+|..|.+. |. +|+++++... + .+.+ ..++...+.+.
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~--------------g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 68 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRG--------------GVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQ 68 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHH
T ss_pred eEEEECccHHHHHHHHHHHHC--------------CCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHH
Confidence 799999999999999999986 67 9999998531 0 1111 24667778888
Q ss_pred HHhCCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 288 FSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 288 l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
+++.|++++. .++.+++. +.+.+.. .+|+. +.+|.||+|+|.
T Consensus 69 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~g~~--~~~~~vv~AtG~ 112 (311)
T 2q0l_A 69 CFRFGLKHEM-TAVQRVSKKDSHFVILA-EDGKT--FEAKSVIIATGG 112 (311)
T ss_dssp HHTTSCEEEC-SCEEEEEEETTEEEEEE-TTSCE--EEEEEEEECCCE
T ss_pred HHHcCCEEEE-EEEEEEEEcCCEEEEEE-cCCCE--EECCEEEECCCC
Confidence 8889999998 78888863 3344443 45654 899999999993
No 233
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.08 E-value=7.1e-06 Score=83.91 Aligned_cols=104 Identities=17% Similarity=0.258 Sum_probs=76.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++++|||+|+.|+.+|..|++.|.+|+++++... ++.. ..++...+.+.+++.|+++ +.+..+..
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~------l~~~------d~~~~~~l~~~l~~~Gv~i-~~~~~v~~ 252 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIV------LRGF------DQQMAELVAASMEERGIPF-LRKTVPLS 252 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCS------STTS------CHHHHHHHHHHHHHTTCCE-EETEEEEE
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC------Cccc------CHHHHHHHHHHHHhCCCEE-EeCCEEEE
Confidence 357999999999999999999999999999987421 1111 1245566778888999987 46778888
Q ss_pred EecCC-C--EEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 137 IDAEN-K--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 137 id~~~-~--~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
+.... + .+.+.++. .++...+.+|.||+|+|..|+..
T Consensus 253 i~~~~~~~~~v~~~~~~-----~~~~~~~~~D~vi~a~G~~p~~~ 292 (483)
T 3dgh_A 253 VEKQDDGKLLVKYKNVE-----TGEESEDVYDTVLWAIGRKGLVD 292 (483)
T ss_dssp EEECTTSCEEEEEEETT-----TCCEEEEEESEEEECSCEEECCG
T ss_pred EEEcCCCcEEEEEecCC-----CCceeEEEcCEEEECcccccCcC
Confidence 87532 2 35555542 22345799999999999988754
No 234
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.07 E-value=4e-06 Score=86.17 Aligned_cols=102 Identities=15% Similarity=0.240 Sum_probs=76.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++++|||+|+.|+.+|..|...|.+|+++++.+.+.. . . ..++...+.+.+++.|+++ +.++.|..
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-----~-----~-d~~~~~~l~~~l~~~GV~i-~~~~~V~~ 248 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP-----Y-----E-DADAALVLEESFAERGVRL-FKNARAAS 248 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC-----C-----S-SHHHHHHHHHHHHHTTCEE-ETTCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc-----c-----c-CHHHHHHHHHHHHHCCCEE-EeCCEEEE
Confidence 357999999999999999999999999999998865321 1 1 1245566778888999887 35678888
Q ss_pred EecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
++.+++.+.+..++ + ..+.+|.||+|+|.+|+..
T Consensus 249 i~~~~~~v~v~~~~-----g---~~i~aD~Vv~a~G~~p~~~ 282 (499)
T 1xdi_A 249 VTRTGAGVLVTMTD-----G---RTVEGSHALMTIGSVPNTS 282 (499)
T ss_dssp EEECSSSEEEEETT-----S---CEEEESEEEECCCEEECCS
T ss_pred EEEeCCEEEEEECC-----C---cEEEcCEEEECCCCCcCCC
Confidence 87665434443321 1 1799999999999998764
No 235
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.07 E-value=5e-06 Score=79.63 Aligned_cols=37 Identities=19% Similarity=0.203 Sum_probs=33.6
Q ss_pred CeEEEECCcHHHHHHHHhcCCC--CCcEEEEcCCCCccc
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAF 95 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~--g~~V~lie~~~~~~~ 95 (485)
+||+|||||++|+++|+.|++. |++|+|+|+.+..++
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~gg 104 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCT
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccc
Confidence 4999999999999999999977 999999999887664
No 236
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.07 E-value=6.2e-06 Score=86.09 Aligned_cols=34 Identities=12% Similarity=0.302 Sum_probs=32.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
.+||+|||||.+|+++|+.|+..|++|+|+|+.+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4799999999999999999999999999999875
No 237
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.06 E-value=4.2e-06 Score=85.83 Aligned_cols=100 Identities=18% Similarity=0.239 Sum_probs=72.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCC----CCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNN----PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAE 133 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~----~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~ 133 (485)
.++|+|||||+.|+.+|..|+. .|.+|+++++.+.+... .+ +..+...+.+.+++.|++++ .+..
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~-~l---------~~~~~~~~~~~l~~~GV~v~-~~~~ 248 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGK-IL---------PEYLSNWTMEKVRREGVKVM-PNAI 248 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTT-TS---------CHHHHHHHHHHHHTTTCEEE-CSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccc-cC---------CHHHHHHHHHHHHhcCCEEE-eCCE
Confidence 5799999999999999999875 57899999987542211 11 12444556778888998873 5667
Q ss_pred EEEEecCCCE--EEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 134 CFKIDAENKK--VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 134 v~~id~~~~~--v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
+..++.+++. +.+.++. .+.+|.||+|+|.+|+..
T Consensus 249 V~~i~~~~~~~~v~l~dG~----------~i~aD~Vv~a~G~~pn~~ 285 (493)
T 1m6i_A 249 VQSVGVSSGKLLIKLKDGR----------KVETDHIVAAVGLEPNVE 285 (493)
T ss_dssp EEEEEEETTEEEEEETTSC----------EEEESEEEECCCEEECCT
T ss_pred EEEEEecCCeEEEEECCCC----------EEECCEEEECCCCCccHH
Confidence 8888765443 4444443 899999999999998753
No 238
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.06 E-value=4.7e-06 Score=85.32 Aligned_cols=101 Identities=17% Similarity=0.305 Sum_probs=76.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++++|||+|+.|+.+|..|+..|.+|+++++.+.+.. . . ..++...+.+.+++.|+++ +.++.+..
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~-----~-----~-~~~~~~~l~~~l~~~Gv~i-~~~~~V~~ 257 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR-----N-----F-DYDLRQLLNDAMVAKGISI-IYEATVSQ 257 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----T-----S-CHHHHHHHHHHHHHHTCEE-ESSCCEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc-----c-----c-CHHHHHHHHHHHHHCCCEE-EeCCEEEE
Confidence 367999999999999999999999999999998865321 1 0 1244555777788889886 35678888
Q ss_pred EecCCC--EEEEecCCccCCCCCceEEeecCEEEEccCCCCCCCC
Q 011476 137 IDAENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (485)
Q Consensus 137 id~~~~--~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~ 179 (485)
++.+++ .+.+.++. .+.+|.||+|+|.+|+...
T Consensus 258 i~~~~~~v~v~~~~g~----------~i~aD~Vi~A~G~~p~~~~ 292 (484)
T 3o0h_A 258 VQSTENCYNVVLTNGQ----------TICADRVMLATGRVPNTTG 292 (484)
T ss_dssp EEECSSSEEEEETTSC----------EEEESEEEECCCEEECCTT
T ss_pred EEeeCCEEEEEECCCc----------EEEcCEEEEeeCCCcCCCC
Confidence 877654 34444432 8999999999999887653
No 239
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.06 E-value=7.3e-06 Score=83.71 Aligned_cols=107 Identities=14% Similarity=0.134 Sum_probs=75.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++++|||+|+.|+.+|..|++.|.+|+++++.+.+. +. ...++...+.+.+++.|+++ +.+..+..
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-----~~------~d~~~~~~~~~~l~~~gv~i-~~~~~v~~ 253 (478)
T 3dk9_A 186 LPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL-----RS------FDSMISTNCTEELENAGVEV-LKFSQVKE 253 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-----TT------SCHHHHHHHHHHHHHTTCEE-ETTEEEEE
T ss_pred cCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc-----cc------cCHHHHHHHHHHHHHCCCEE-EeCCEEEE
Confidence 35899999999999999999999999999999876532 11 11244556778888899886 35677888
Q ss_pred EecCC-C-EEEEecCCccCCCCCce--EEeecCEEEEccCCCCCCC
Q 011476 137 IDAEN-K-KVYCRSSQNTNLNGKEE--FCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 137 id~~~-~-~v~~~~~~~~~~~~~~~--~~~~yd~lviAtG~~~~~~ 178 (485)
+.... . .+.+..... ..++. ..+.+|.||+|+|..|+..
T Consensus 254 i~~~~~~~~~~v~~~~~---~~g~~~g~~~~~D~vi~a~G~~p~~~ 296 (478)
T 3dk9_A 254 VKKTLSGLEVSMVTAVP---GRLPVMTMIPDVDCLLWAIGRVPNTK 296 (478)
T ss_dssp EEECSSSEEEEEEECCT---TSCCEEEEEEEESEEEECSCEEESCT
T ss_pred EEEcCCCcEEEEEEccC---CCCcccceEEEcCEEEEeeccccCCC
Confidence 87543 2 233322110 01111 4799999999999988765
No 240
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.04 E-value=2e-05 Score=81.48 Aligned_cols=99 Identities=19% Similarity=0.232 Sum_probs=74.8
Q ss_pred ccEEEECCChhHHHHHHHHH-HhhHHHHHhhCcCCCCCceEEEEecCccccc--------c-------------------
Q 011476 224 LHFVIVGGGPTGVEFAAELH-DFVDEDLFKLYPKVKDSVKITLLEAADHILN--------M------------------- 275 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~-~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~--------~------------------- 275 (485)
.+|+|||||+.|+.+|..|. +. |.+|+|+++.+.+.. .
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~--------------G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~ 74 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHEL--------------GLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLL 74 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcC--------------CCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccc
Confidence 38999999999999999999 64 789999999753310 0
Q ss_pred ----------ccHHHHHHHHHHHHhCCc--EEEcCceEEEEeC--C--cEEEEEcCCCeEEEEecCeEEEccCCCCCcch
Q 011476 276 ----------FDKRITAFAEEKFSRDGI--DVKLGSMVVKVTD--K--EIFTKVRGNGETSSMPYGMVVWSTGIAPHAII 339 (485)
Q Consensus 276 ----------~~~~~~~~~~~~l~~~gV--~v~~~~~v~~v~~--~--~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~ 339 (485)
...++...+.+.+++.|+ .++++++|++++. + ...+. ..+|++ +.+|.||+|+|....|..
T Consensus 75 ~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~-~~~G~~--i~ad~lV~AtG~~s~p~~ 151 (540)
T 3gwf_A 75 QESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVT-TDHGEV--YRAKYVVNAVGLLSAINF 151 (540)
T ss_dssp HHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEE-ETTSCE--EEEEEEEECCCSCCSBCC
T ss_pred cCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEE-EcCCCE--EEeCEEEECCcccccCCC
Confidence 024567778888888998 8999999999863 2 23444 367775 899999999995445543
No 241
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.04 E-value=9e-06 Score=85.35 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=32.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~ 92 (485)
.+||||||||+||++||+.|++.|.+|+|+|+...
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~ 52 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFP 52 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 46999999999999999999999999999998754
No 242
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.03 E-value=1e-05 Score=82.92 Aligned_cols=104 Identities=14% Similarity=0.132 Sum_probs=74.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++++|||+|+.|+.+|..|++.|.+|+++++... ++.. ..++...+.+.+++.|+++ +.+..+..
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~------l~~~------d~~~~~~l~~~l~~~gv~~-~~~~~v~~ 250 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIP------LRGF------DQQMSSLVTEHMESHGTQF-LKGCVPSH 250 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS------STTS------CHHHHHHHHHHHHHTTCEE-EETEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcc------cccC------CHHHHHHHHHHHHHCCCEE-EeCCEEEE
Confidence 356899999999999999999999999999997531 1111 1245566778888999887 35677888
Q ss_pred EecC-CC--EEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 137 IDAE-NK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 137 id~~-~~--~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
+... ++ .+.+.+.. +++...+.+|.||+|+|..|+..
T Consensus 251 i~~~~~~~~~v~~~~~~-----~g~~~~~~~D~vi~a~G~~p~~~ 290 (488)
T 3dgz_A 251 IKKLPTNQLQVTWEDHA-----SGKEDTGTFDTVLWAIGRVPETR 290 (488)
T ss_dssp EEECTTSCEEEEEEETT-----TTEEEEEEESEEEECSCEEESCG
T ss_pred EEEcCCCcEEEEEEeCC-----CCeeEEEECCEEEEcccCCcccC
Confidence 7642 22 34444421 23334689999999999988764
No 243
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.03 E-value=7e-06 Score=85.32 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=33.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~ 93 (485)
.++|+||||||+|+++|..|++.|++|+|||+.+..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 469999999999999999999999999999987654
No 244
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.03 E-value=1.3e-06 Score=89.99 Aligned_cols=42 Identities=19% Similarity=0.148 Sum_probs=37.9
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCC-CCCcEEEEcCCCCcccCC
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNN-PSYDVQVISPRNYFAFTP 97 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~-~g~~V~lie~~~~~~~~~ 97 (485)
.+.+||||||||++||+||++|++ .|++|+|+|+++++||..
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~ 50 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLA 50 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGG
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCe
Confidence 456899999999999999999986 699999999999999853
No 245
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.01 E-value=2e-05 Score=79.99 Aligned_cols=106 Identities=16% Similarity=0.220 Sum_probs=72.0
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc-------cc----------------------
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL-------NM---------------------- 275 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l-------~~---------------------- 275 (485)
+|+|||||+.|+.+|..|.+.+... .+ .+|+++++.+.+. +.
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~--------~~-~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~ 102 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQ--------GA-LEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYS 102 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHH--------CC-CCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTS
T ss_pred CEEEECCCHHHHHHHHHHHhccccc--------Cc-ccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCC
Confidence 7999999999999999999974210 00 6899999887321 00
Q ss_pred ----------------------ccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC----c---EEEEEc-CCCeEEEEecC
Q 011476 276 ----------------------FDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK----E---IFTKVR-GNGETSSMPYG 325 (485)
Q Consensus 276 ----------------------~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~----~---v~~~~~-~~G~~~~i~~D 325 (485)
...++..++....++.+++++++++|++++.+ + +.+... .+|+..++.+|
T Consensus 103 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d 182 (463)
T 3s5w_A 103 FVNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTR 182 (463)
T ss_dssp HHHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEES
T ss_pred hhHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeC
Confidence 01344455666666779999999999998642 2 233321 12444459999
Q ss_pred eEEEccCCCCCcchHH
Q 011476 326 MVVWSTGIAPHAIIKD 341 (485)
Q Consensus 326 ~vi~a~G~~~~p~~~~ 341 (485)
.||+|+| ..|....
T Consensus 183 ~lVlAtG--~~p~~p~ 196 (463)
T 3s5w_A 183 ALVVSPG--GTPRIPQ 196 (463)
T ss_dssp EEEECCC--CEECCCG
T ss_pred EEEECCC--CCCCCcc
Confidence 9999999 4665433
No 246
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.01 E-value=2.3e-05 Score=81.27 Aligned_cols=98 Identities=18% Similarity=0.258 Sum_probs=74.2
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc--------c--------------------
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN--------M-------------------- 275 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~--------~-------------------- 275 (485)
.+|+|||||+.|+.+|..|.+. |.+|+|+++.+.+.. .
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~--------------G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~ 87 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQ--------------GLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQ 87 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHH
T ss_pred CCEEEECchHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCccccCCCCCceeCCCchhccccccccccc
Confidence 4899999999999999999985 689999998653310 0
Q ss_pred ---------ccHHHHHHHHHHHHhCCc--EEEcCceEEEEeC--C--cEEEEEcCCCeEEEEecCeEEEccCCCCCcc
Q 011476 276 ---------FDKRITAFAEEKFSRDGI--DVKLGSMVVKVTD--K--EIFTKVRGNGETSSMPYGMVVWSTGIAPHAI 338 (485)
Q Consensus 276 ---------~~~~~~~~~~~~l~~~gV--~v~~~~~v~~v~~--~--~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~ 338 (485)
..+++..++.+.+++.|+ +++++++|++++. + ...+. +.+|++ +.+|.||+|+|....|.
T Consensus 88 ~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~-~~~G~~--i~ad~lV~AtG~~s~p~ 162 (549)
T 4ap3_A 88 EWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVR-TDRGDE--VSARFLVVAAGPLSNAN 162 (549)
T ss_dssp HCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEE-ETTCCE--EEEEEEEECCCSEEECC
T ss_pred CCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEE-ECCCCE--EEeCEEEECcCCCCCCC
Confidence 124667788888889998 8999999999852 2 23443 367775 89999999999433343
No 247
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.01 E-value=8.7e-06 Score=84.11 Aligned_cols=101 Identities=12% Similarity=0.232 Sum_probs=74.5
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEEe
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKID 138 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~id 138 (485)
++++|||+|+.|+.+|..|...|.+|+++++.+.+.. . ...++...+.+.+++.|+++ +.++.|..++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~-----~------~~~~~~~~l~~~l~~~GV~i-~~~~~V~~i~ 282 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKL-----I------KDNETRAYVLDRMKEQGMEI-ISGSNVTRIE 282 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-----C------CSHHHHHHHHHHHHHTTCEE-ESSCEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccc-----c------ccHHHHHHHHHHHHhCCcEE-EECCEEEEEE
Confidence 8999999999999999999999999999998865321 1 11245566778888899887 3577898887
Q ss_pred cCCCE----EEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 139 AENKK----VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 139 ~~~~~----v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
.++.. +.+... ++ +..+.+|.||+|+|.+|+..
T Consensus 283 ~~~~~~v~~~~v~~~------~G-~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 283 EDANGRVQAVVAMTP------NG-EMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp ECTTSBEEEEEEEET------TE-EEEEECSCEEECCCCEECCH
T ss_pred EcCCCceEEEEEEEC------CC-cEEEEcCEEEECcCCccCCc
Confidence 63221 333321 11 12689999999999998763
No 248
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.00 E-value=5.2e-05 Score=79.15 Aligned_cols=54 Identities=15% Similarity=0.132 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEe--C-CcEE---EEEcCCCeEEEEecCeEEEccCC
Q 011476 279 RITAFAEEKFSRDGIDVKLGSMVVKVT--D-KEIF---TKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 279 ~~~~~~~~~l~~~gV~v~~~~~v~~v~--~-~~v~---~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
.+...+.+.+++.||+++++++|+++. + +.+. +.. .+|+..++.+|.||+|+|.
T Consensus 256 ~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg 315 (571)
T 1y0p_A 256 HVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKG-MYKGYYWVKADAVILATGG 315 (571)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEE-TTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEe-CCCcEEEEECCeEEEeCCC
Confidence 344566677788999999999999985 3 3333 332 3677666999999999995
No 249
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.00 E-value=3.1e-05 Score=76.93 Aligned_cols=93 Identities=17% Similarity=0.250 Sum_probs=69.7
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc------------------------------
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL------------------------------ 273 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l------------------------------ 273 (485)
.+|+|||||+.|+.+|..|++. |.+|+|+++.+...
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~--------------G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~ 72 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQ--------------GHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGG 72 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTC
T ss_pred CCEEEECcCHHHHHHHHHHHhC--------------CCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCC
Confidence 3899999999999999999986 57788887654320
Q ss_pred ---------------cc---------------ccHHHHHHHHHHHHhC-CcEEEcCceEEEEeC--CcE--EEEEcCCCe
Q 011476 274 ---------------NM---------------FDKRITAFAEEKFSRD-GIDVKLGSMVVKVTD--KEI--FTKVRGNGE 318 (485)
Q Consensus 274 ---------------~~---------------~~~~~~~~~~~~l~~~-gV~v~~~~~v~~v~~--~~v--~~~~~~~G~ 318 (485)
.. ....+...+.+.+++. |++++++++|++++. +++ .+.. .+|+
T Consensus 73 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~-~~g~ 151 (399)
T 2x3n_A 73 RVRHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRL-NDGR 151 (399)
T ss_dssp EEECEEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEE-TTSC
T ss_pred CcceeEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEE-CCCC
Confidence 00 0124556677777777 999999999999964 445 4544 5676
Q ss_pred EEEEecCeEEEccCC
Q 011476 319 TSSMPYGMVVWSTGI 333 (485)
Q Consensus 319 ~~~i~~D~vi~a~G~ 333 (485)
. +.+|.||.|.|.
T Consensus 152 ~--~~ad~vV~AdG~ 164 (399)
T 2x3n_A 152 V--LRPRVVVGADGI 164 (399)
T ss_dssp E--EEEEEEEECCCT
T ss_pred E--EECCEEEECCCC
Confidence 4 899999999994
No 250
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.00 E-value=5.7e-06 Score=85.29 Aligned_cols=34 Identities=29% Similarity=0.391 Sum_probs=30.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCC---CCCcEEEEcCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNN---PSYDVQVISPRN 91 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~---~g~~V~lie~~~ 91 (485)
.++|||||||++|+++|..|++ .|++|+|||+.+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 4699999999999999999998 999999999764
No 251
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.98 E-value=6.6e-06 Score=83.30 Aligned_cols=88 Identities=17% Similarity=0.210 Sum_probs=68.2
Q ss_pred hcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccc-------ccc--ccHHHHHHHHHHHHhCC
Q 011476 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI-------LNM--FDKRITAFAEEKFSRDG 292 (485)
Q Consensus 222 ~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~-------l~~--~~~~~~~~~~~~l~~~g 292 (485)
.+++|+|||||+.|+.+|..|++. |.+|+|+++.+.+ ++. ++.++.....+.+++.|
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~--------------G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~g 186 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK--------------GYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAG 186 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH--------------TCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--------------CCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCC
Confidence 567999999999999999999987 6899999998765 222 35667777788899999
Q ss_pred cEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 293 V~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
|++++++.+. ..+.+ +++. +.+|.||+|+|.
T Consensus 187 v~~~~~~~v~----~~v~~---~~~~---~~~d~vvlAtG~ 217 (456)
T 2vdc_G 187 VIYHPNFEVG----RDASL---PELR---RKHVAVLVATGV 217 (456)
T ss_dssp CEEETTCCBT----TTBCH---HHHH---SSCSEEEECCCC
T ss_pred cEEEeCCEec----cEEEh---hHhH---hhCCEEEEecCC
Confidence 9999998752 11111 1222 679999999995
No 252
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.98 E-value=1.4e-05 Score=82.37 Aligned_cols=105 Identities=17% Similarity=0.252 Sum_probs=71.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++++|||+|+.|+.+|..|++.|.+|+++++.. +++.. ..++...+.+.+++.||++. ....+..
T Consensus 209 ~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~------~l~~~------d~~~~~~~~~~l~~~GV~v~-~~~~v~~ 275 (519)
T 3qfa_A 209 CPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSI------LLRGF------DQDMANKIGEHMEEHGIKFI-RQFVPIK 275 (519)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC------SSTTS------CHHHHHHHHHHHHHTTCEEE-ESEEEEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEeccc------ccccC------CHHHHHHHHHHHHHCCCEEE-eCCeEEE
Confidence 35689999999999999999999999999999742 11111 12455667788889998873 4555555
Q ss_pred EecCC----CE--EEEecCCccCCCCCceEEeecCEEEEccCCCCCCCC
Q 011476 137 IDAEN----KK--VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (485)
Q Consensus 137 id~~~----~~--v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~ 179 (485)
+.... .. +.+.... +++...+.+|.||+|+|..|+...
T Consensus 276 v~~~~~~~~~~~~v~~~~~~-----g~~~~~~~~D~vi~a~G~~p~~~~ 319 (519)
T 3qfa_A 276 VEQIEAGTPGRLRVVAQSTN-----SEEIIEGEYNTVMLAIGRDACTRK 319 (519)
T ss_dssp EEEEECCTTCEEEEEEEESS-----SSCEEEEEESEEEECSCEEESCSS
T ss_pred EEEccCCCCceEEEEEEECC-----CcEEEEEECCEEEEecCCcccCCC
Confidence 43311 22 3333221 222346789999999999987643
No 253
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.98 E-value=2.4e-05 Score=81.07 Aligned_cols=100 Identities=15% Similarity=0.231 Sum_probs=73.5
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc-----------------------------
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN----------------------------- 274 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~----------------------------- 274 (485)
.+|+|||||+.|+.+|..|.+. |.+|+|+++.+.+..
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~--------------g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~ 75 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQA--------------GMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIP 75 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSST
T ss_pred CCEEEECccHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCccccc
Confidence 3899999999999999999885 689999999764310
Q ss_pred --------cccHHHHHHHHHHHHhCCc--EEEcCceEEEEeCC---cEEEEEcCCCeEEEEecCeEEEccCCCCCcch
Q 011476 275 --------MFDKRITAFAEEKFSRDGI--DVKLGSMVVKVTDK---EIFTKVRGNGETSSMPYGMVVWSTGIAPHAII 339 (485)
Q Consensus 275 --------~~~~~~~~~~~~~l~~~gV--~v~~~~~v~~v~~~---~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~ 339 (485)
...+++...+.+.+++.|+ .++++++|++++.+ +...+.+.+|++ +.||.||+|+|....|..
T Consensus 76 ~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~--~~ad~lV~AtG~~s~p~~ 151 (545)
T 3uox_A 76 EWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEV--VTCRFLISATGPLSASRM 151 (545)
T ss_dssp TCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEE--EEEEEEEECCCSCBC---
T ss_pred CCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCE--EEeCEEEECcCCCCCCcC
Confidence 0125677788888888887 78999999998632 233333467765 899999999995444443
No 254
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.97 E-value=4.4e-05 Score=78.74 Aligned_cols=93 Identities=17% Similarity=0.221 Sum_probs=71.6
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCc--ccc--------c----cccHHHHHHHHHHHH
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD--HIL--------N----MFDKRITAFAEEKFS 289 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~--~~l--------~----~~~~~~~~~~~~~l~ 289 (485)
.+|+|||||+.|+.+|..+++. |.+|+++++.. .+. . ....++...+.+.++
T Consensus 213 ~dVvIIGgG~AGl~aA~~la~~--------------G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 278 (521)
T 1hyu_A 213 YDVLIVGSGPAGAAAAVYSARK--------------GIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVS 278 (521)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHH
T ss_pred ccEEEECCcHHHHHHHHHHHhC--------------CCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 4799999999999999999986 68999997632 111 0 123467778888889
Q ss_pred hCCcEEEcCceEEEEeCC-----cEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 290 RDGIDVKLGSMVVKVTDK-----EIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 290 ~~gV~v~~~~~v~~v~~~-----~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
+.||+++.++++++++.+ ...+.. .+|.. +.+|.||+|+|.
T Consensus 279 ~~gv~v~~~~~v~~i~~~~~~~~~~~V~~-~~g~~--~~~d~vVlAtG~ 324 (521)
T 1hyu_A 279 DYDVDVIDSQSASKLVPAATEGGLHQIET-ASGAV--LKARSIIIATGA 324 (521)
T ss_dssp TSCEEEECSCCEEEEECCSSTTSCEEEEE-TTSCE--EEEEEEEECCCE
T ss_pred HcCCEEEcCCEEEEEEeccCCCceEEEEE-CCCCE--EEcCEEEECCCC
Confidence 999999999999999642 344443 56764 899999999994
No 255
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.96 E-value=5.3e-05 Score=75.07 Aligned_cols=95 Identities=19% Similarity=0.295 Sum_probs=70.4
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccc----------c-c-------------------
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI----------L-N------------------- 274 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~----------l-~------------------- 274 (485)
+|+|||||+.|+.+|..|++. |.+|+|+++.+.. + +
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~--------------G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~ 69 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKA--------------GIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDG 69 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHH--------------TCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHC
T ss_pred cEEEECCCHHHHHHHHHHHHC--------------CCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcC
Confidence 799999999999999999987 6789999876531 0 0
Q ss_pred ------------------------c-----cc-HHHHHHHHHHHHhCCcEEEcCceEEEEeCC---cEEEEEcCCCeEEE
Q 011476 275 ------------------------M-----FD-KRITAFAEEKFSRDGIDVKLGSMVVKVTDK---EIFTKVRGNGETSS 321 (485)
Q Consensus 275 ------------------------~-----~~-~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~---~v~~~~~~~G~~~~ 321 (485)
. ++ ..+...+.+.+.+.|++++++++|++++.+ .+.+....+|+..+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~ 149 (394)
T 1k0i_A 70 LVHEGVEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLR 149 (394)
T ss_dssp EEESCEEEEETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEE
T ss_pred CccceEEEEECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEE
Confidence 0 01 234455666777789999999999999642 34443214687555
Q ss_pred EecCeEEEccCC
Q 011476 322 MPYGMVVWSTGI 333 (485)
Q Consensus 322 i~~D~vi~a~G~ 333 (485)
+.+|.||.|.|.
T Consensus 150 ~~a~~vV~AdG~ 161 (394)
T 1k0i_A 150 LDCDYIAGCDGF 161 (394)
T ss_dssp EECSEEEECCCT
T ss_pred EEeCEEEECCCC
Confidence 999999999995
No 256
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.96 E-value=7.9e-06 Score=85.00 Aligned_cols=35 Identities=23% Similarity=0.379 Sum_probs=32.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcCC---CCCcEEEEcCCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNN---PSYDVQVISPRN 91 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~---~g~~V~lie~~~ 91 (485)
..++|||||||+||+++|..|++ .|++|+|||+.+
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 35799999999999999999998 999999999864
No 257
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.94 E-value=2.5e-05 Score=82.62 Aligned_cols=36 Identities=19% Similarity=0.122 Sum_probs=32.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~ 93 (485)
.+||||||||.||++||+.|++.|.+|+|||+.+..
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 469999999999999999999999999999987643
No 258
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.94 E-value=6.7e-05 Score=78.30 Aligned_cols=65 Identities=15% Similarity=0.155 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhCCcEEEcCceEEEEe--C-CcEEEEEc--CCCeEEEEecCeEEEccCCCCCcchHHHHHHh
Q 011476 280 ITAFAEEKFSRDGIDVKLGSMVVKVT--D-KEIFTKVR--GNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV 346 (485)
Q Consensus 280 ~~~~~~~~l~~~gV~v~~~~~v~~v~--~-~~v~~~~~--~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~ 346 (485)
+...+.+.+++.||++++++.++++. + +.+..+.. .+|+..++.+|.||+|+|. .+...++++..
T Consensus 257 l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg--~~~~~~~~~~~ 326 (572)
T 1d4d_A 257 VAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGG--FAKNNERVSKY 326 (572)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCC--CTTCHHHHHHH
T ss_pred HHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCC--CccCHHHHHHh
Confidence 44566677788999999999999984 3 34332221 3677667999999999994 33333554443
No 259
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.93 E-value=4.1e-05 Score=76.54 Aligned_cols=94 Identities=17% Similarity=0.297 Sum_probs=70.3
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccc--------ccc---------------------
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI--------LNM--------------------- 275 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~--------l~~--------------------- 275 (485)
+|+|||||++|+-+|..|++. |.+|+|+++.+.. .+.
T Consensus 7 dVvIIGgG~aGl~~A~~La~~--------------G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~ 72 (421)
T 3nix_A 7 DVLVIGAGPAGTVAASLVNKS--------------GFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQ 72 (421)
T ss_dssp EEEEECCSHHHHHHHHHHHTT--------------TCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEE
T ss_pred cEEEECCCHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcc
Confidence 899999999999999999986 6889999886410 000
Q ss_pred ------------------------------c-cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--Cc--EEEEEcCCCeEE
Q 011476 276 ------------------------------F-DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KE--IFTKVRGNGETS 320 (485)
Q Consensus 276 ------------------------------~-~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~--v~~~~~~~G~~~ 320 (485)
+ ...+...+.+.+++.|++++.+++|++++. ++ +.+.. .+|+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~-~~g~~~ 151 (421)
T 3nix_A 73 KFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIED-INGNKR 151 (421)
T ss_dssp ECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEE-TTSCEE
T ss_pred cCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEc-CCCCEE
Confidence 0 123455667777788999999999999863 33 33333 678755
Q ss_pred EEecCeEEEccCC
Q 011476 321 SMPYGMVVWSTGI 333 (485)
Q Consensus 321 ~i~~D~vi~a~G~ 333 (485)
++.+|.||.|+|.
T Consensus 152 ~~~a~~vV~A~G~ 164 (421)
T 3nix_A 152 EIEARFIIDASGY 164 (421)
T ss_dssp EEEEEEEEECCGG
T ss_pred EEEcCEEEECCCC
Confidence 6999999999994
No 260
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.93 E-value=1.2e-05 Score=81.75 Aligned_cols=102 Identities=13% Similarity=0.201 Sum_probs=75.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEE
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~ 136 (485)
.+++++|||+|+.|+.+|..|+..|.+|+++++.+.+. +. . ..++...+.+.+++.|+++ +.++.+..
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l-----~~-----~-~~~~~~~l~~~l~~~Gv~i-~~~~~v~~ 236 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL-----SR-----F-DQDMRRGLHAAMEEKGIRI-LCEDIIQS 236 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-----TT-----S-CHHHHHHHHHHHHHTTCEE-ECSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-----cc-----c-CHHHHHHHHHHHHHCCCEE-ECCCEEEE
Confidence 36899999999999999999999999999999886532 11 1 1245566778888999887 35678888
Q ss_pred EecCC-CEEEEe-cCCccCCCCCceEEeecCEEEEccCCCCCCCC
Q 011476 137 IDAEN-KKVYCR-SSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (485)
Q Consensus 137 id~~~-~~v~~~-~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~~ 179 (485)
+..++ +.+.+. .. ++ ++.+|.||+|+|.+|+...
T Consensus 237 i~~~~~~~~~v~~~~------~g---~i~aD~Vv~a~G~~p~~~~ 272 (463)
T 4dna_A 237 VSADADGRRVATTMK------HG---EIVADQVMLALGRMPNTNG 272 (463)
T ss_dssp EEECTTSCEEEEESS------SC---EEEESEEEECSCEEESCTT
T ss_pred EEEcCCCEEEEEEcC------CC---eEEeCEEEEeeCcccCCCC
Confidence 87653 223333 21 12 3899999999999987653
No 261
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.92 E-value=4.5e-05 Score=75.75 Aligned_cols=100 Identities=14% Similarity=0.226 Sum_probs=69.6
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc------cccHHHHH---------------
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN------MFDKRITA--------------- 282 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~------~~~~~~~~--------------- 282 (485)
.+|+|||||+.|+.+|..|++. |.+|+|+++.+.... .+.+...+
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~~--------------G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~ 71 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRDA--------------GVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVP 71 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBC
T ss_pred CcEEEECCCHHHHHHHHHHHhC--------------CCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcccccccc
Confidence 3899999999999999999986 689999988765311 01222111
Q ss_pred ----------------------------HHHHHHHh--CCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEc
Q 011476 283 ----------------------------FAEEKFSR--DGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWS 330 (485)
Q Consensus 283 ----------------------------~~~~~l~~--~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a 330 (485)
.+.+.|.+ .|++++++++|++++. +++.+.. .+|++ +.+|.||.|
T Consensus 72 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~-~~g~~--~~ad~vV~A 148 (397)
T 2vou_A 72 SSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRF-SDGTK--AEANWVIGA 148 (397)
T ss_dssp CCEEEEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEE-TTSCE--EEESEEEEC
T ss_pred ccceEEEecCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEE-CCCCE--EECCEEEEC
Confidence 12222222 3899999999999953 4566554 56765 899999999
Q ss_pred cCCCCCcchHHH
Q 011476 331 TGIAPHAIIKDF 342 (485)
Q Consensus 331 ~G~~~~p~~~~l 342 (485)
.| ....+...
T Consensus 149 dG--~~S~vr~~ 158 (397)
T 2vou_A 149 DG--GASVVRKR 158 (397)
T ss_dssp CC--TTCHHHHH
T ss_pred CC--cchhHHHH
Confidence 99 45544443
No 262
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.91 E-value=1.7e-05 Score=81.92 Aligned_cols=34 Identities=21% Similarity=0.386 Sum_probs=31.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCC------------CCCcEEEEcCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNN------------PSYDVQVISPRN 91 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~------------~g~~V~lie~~~ 91 (485)
.++|||||||+||+++|..|++ .|++|+|||+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 5799999999999999999998 999999999764
No 263
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.91 E-value=5.7e-05 Score=72.27 Aligned_cols=95 Identities=16% Similarity=0.146 Sum_probs=69.5
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcc---cc--------cc----ccHHHHHHHHHHHH
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH---IL--------NM----FDKRITAFAEEKFS 289 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~---~l--------~~----~~~~~~~~~~~~l~ 289 (485)
.|+|||||+.|+.+|..+++. |.+|+|+++... .+ |. ...++.........
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~--------------g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~ 73 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRA--------------NLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAK 73 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHC--------------CCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHh
Confidence 699999999999999999987 689999987531 11 11 12456666777778
Q ss_pred hCCcEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcc
Q 011476 290 RDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAI 338 (485)
Q Consensus 290 ~~gV~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~ 338 (485)
+.++.+..+..+............ .++++ +.+|.+|+||| ..|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~d~liiAtG--s~~~ 117 (312)
T 4gcm_A 74 KFGAVYQYGDIKSVEDKGEYKVIN-FGNKE--LTAKAVIIATG--AEYK 117 (312)
T ss_dssp HTTCEEEECCCCEEEECSSCEEEE-CSSCE--EEEEEEEECCC--EEEC
T ss_pred hccccccceeeeeeeeeecceeec-cCCeE--EEeceeEEccc--CccC
Confidence 888888888777666554434443 34554 89999999999 4554
No 264
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.89 E-value=5.2e-05 Score=72.46 Aligned_cols=92 Identities=18% Similarity=0.152 Sum_probs=66.5
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccc-------c---------ccc-----cHHHHHH
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI-------L---------NMF-----DKRITAF 283 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~-------l---------~~~-----~~~~~~~ 283 (485)
.|+|||||+.|+.+|..+++. |.+|+++++...- + +.+ ..++...
T Consensus 6 DvvIIG~GpAGl~AA~~la~~--------------g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~ 71 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRS--------------SLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMN 71 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHH
T ss_pred cEEEECCCHHHHHHHHHHHHC--------------CCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHH
Confidence 799999999999999999987 6899999875420 0 111 2466777
Q ss_pred HHHHHHhCCcEEEcCceEEEEeC-CcEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 284 AEEKFSRDGIDVKLGSMVVKVTD-KEIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 284 ~~~~l~~~gV~v~~~~~v~~v~~-~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
+.+.+++.++++........... +...... .++.+ +.+|.+|+|||.
T Consensus 72 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~--~~~~~liiATG~ 119 (314)
T 4a5l_A 72 MRTQSEKYGTTIITETIDHVDFSTQPFKLFT-EEGKE--VLTKSVIIATGA 119 (314)
T ss_dssp HHHHHHHTTCEEECCCEEEEECSSSSEEEEE-TTCCE--EEEEEEEECCCE
T ss_pred HHHHHhhcCcEEEEeEEEEeecCCCceEEEE-CCCeE--EEEeEEEEcccc
Confidence 88888999999887664333333 2344443 45554 899999999994
No 265
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.89 E-value=0.0001 Score=71.20 Aligned_cols=91 Identities=16% Similarity=0.255 Sum_probs=64.4
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc--------------------cccHHHHHHH
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN--------------------MFDKRITAFA 284 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~--------------------~~~~~~~~~~ 284 (485)
+|+|||||++|+.+|..|++. |.+|+|+++.+.... .......+.+
T Consensus 4 dV~IIGaG~~Gl~~A~~L~~~--------------G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (336)
T 1yvv_A 4 PIAIIGTGIAGLSAAQALTAA--------------GHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAV 69 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHH
T ss_pred eEEEECCcHHHHHHHHHHHHC--------------CCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHH
Confidence 799999999999999999986 689999998763210 0112222222
Q ss_pred H-------------------------------------------HHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCeE
Q 011476 285 E-------------------------------------------EKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGET 319 (485)
Q Consensus 285 ~-------------------------------------------~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~ 319 (485)
. +.+. .|++++++++|++++. +++.+.. .+|+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~~~v~~-~~g~~ 147 (336)
T 1yvv_A 70 KQWQAQGHVAEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEHWNLLD-AEGQN 147 (336)
T ss_dssp HHHHHHTSEEEECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSCEEEEE-TTSCE
T ss_pred HHHHhCCCeeeccccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCEEEEEe-CCCcC
Confidence 1 1222 3899999999999963 4566554 66764
Q ss_pred EEEecCeEEEccC
Q 011476 320 SSMPYGMVVWSTG 332 (485)
Q Consensus 320 ~~i~~D~vi~a~G 332 (485)
...+|.||.|+|
T Consensus 148 -~~~a~~vV~a~g 159 (336)
T 1yvv_A 148 -HGPFSHVIIATP 159 (336)
T ss_dssp -EEEESEEEECSC
T ss_pred -ccccCEEEEcCC
Confidence 235999999999
No 266
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.88 E-value=6.9e-06 Score=83.77 Aligned_cols=40 Identities=23% Similarity=0.267 Sum_probs=37.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCC--cEEEEcCCCCcccCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPRNYFAFTP 97 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~--~V~lie~~~~~~~~~ 97 (485)
+++|+|||||++||+||++|++.|+ +|+|+|+++..|+..
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTC
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCce
Confidence 4799999999999999999999999 999999999988864
No 267
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.88 E-value=3.4e-05 Score=78.48 Aligned_cols=97 Identities=12% Similarity=0.199 Sum_probs=70.5
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccccc-----------------------------
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM----------------------------- 275 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~----------------------------- 275 (485)
+|+|||||+.|+.+|..|++. |.+|+|+++.+.+...
T Consensus 6 DVvVIGgG~aGl~aA~~l~~~--------------G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~ 71 (466)
T 3l8k_A 6 DVVVIGAGGAGYHGAFRLAKA--------------KYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVK 71 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred eEEEECCCHHHHHHHHHHHhC--------------CCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCC
Confidence 799999999999999999986 6899999976654211
Q ss_pred --cc-HH----------HH--HHHHHHHHhCCcEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcch
Q 011476 276 --FD-KR----------IT--AFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAII 339 (485)
Q Consensus 276 --~~-~~----------~~--~~~~~~l~~~gV~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~ 339 (485)
++ .. +. ..+.+.+++.||+++.+ .+..++.+.+.+.. .+|+..++.+|.+|+|+| ..|..
T Consensus 72 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~~~~~V~~-~~g~~~~~~~d~lviAtG--~~p~~ 146 (466)
T 3l8k_A 72 IPLDFSTVQDRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKDPTHVIVKT-DEGKEIEAETRYMIIASG--AETAK 146 (466)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEETTEEEEEE-TTSCEEEEEEEEEEECCC--EEECC
T ss_pred CCcCHHHHHHHHHhheeccccchHHHHHHhCCCEEEEe-EEEEecCCeEEEEc-CCCcEEEEecCEEEECCC--CCccC
Confidence 00 00 01 33445556779999888 67788877776665 566655589999999999 45543
No 268
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.87 E-value=8e-06 Score=80.15 Aligned_cols=42 Identities=21% Similarity=0.257 Sum_probs=38.2
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC-CCcccCC
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR-NYFAFTP 97 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~-~~~~~~~ 97 (485)
..+++|+|||||++||+||+.|.+.|++|+|+|++ +..|+..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~ 84 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRI 84 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCce
Confidence 45679999999999999999999999999999999 8888753
No 269
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.85 E-value=0.00012 Score=76.44 Aligned_cols=96 Identities=22% Similarity=0.347 Sum_probs=70.8
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc------------------------------
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL------------------------------ 273 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l------------------------------ 273 (485)
.+|+|||||+.|+-+|..|++. |.+|+|+++.+...
T Consensus 24 ~DVvIVGgG~AGl~aA~~Lar~--------------G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~ 89 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVAGLTLHKL--------------GHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYV 89 (591)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCE
T ss_pred CCEEEECcCHHHHHHHHHHHcC--------------CCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCc
Confidence 3899999999999999999986 67888888762100
Q ss_pred ------------------------------c---cc-cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--Cc-EEEEEcCC
Q 011476 274 ------------------------------N---MF-DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KE-IFTKVRGN 316 (485)
Q Consensus 274 ------------------------------~---~~-~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~-v~~~~~~~ 316 (485)
+ .+ ...+...+.+.+++.||+++.+++|+++.. +. +.+....+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~ 169 (591)
T 3i3l_A 90 KKPSATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRG 169 (591)
T ss_dssp EECEEEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEET
T ss_pred ccCCcEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecC
Confidence 0 01 134556677788889999999999999964 23 33333226
Q ss_pred CeEEEEecCeEEEccCC
Q 011476 317 GETSSMPYGMVVWSTGI 333 (485)
Q Consensus 317 G~~~~i~~D~vi~a~G~ 333 (485)
|+..++.+|.||.|+|.
T Consensus 170 G~~~~i~AdlVV~AdG~ 186 (591)
T 3i3l_A 170 GESVTVESDFVIDAGGS 186 (591)
T ss_dssp TEEEEEEESEEEECCGG
T ss_pred CceEEEEcCEEEECCCC
Confidence 75556999999999994
No 270
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.84 E-value=7.9e-05 Score=77.75 Aligned_cols=92 Identities=17% Similarity=0.196 Sum_probs=68.2
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcc-cc-----------------------cc-----
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH-IL-----------------------NM----- 275 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~-~l-----------------------~~----- 275 (485)
.|+|||||+.|+++|..+++. |.+|+|+++.+. +. ..
T Consensus 30 DVIVIGgG~AGl~AAlaLAr~--------------G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~ 95 (651)
T 3ces_A 30 DVIIIGGGHAGTEAAMAAARM--------------GQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKA 95 (651)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHH
T ss_pred CEEEECChHHHHHHHHHHHhC--------------CCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHH
Confidence 799999999999999999986 689999998631 10 00
Q ss_pred -------------------------cc-HHHHHHHHHHHHh-CCcEEEcCceEEEEe--CCcEEEEEcCCCeEEEEecCe
Q 011476 276 -------------------------FD-KRITAFAEEKFSR-DGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGM 326 (485)
Q Consensus 276 -------------------------~~-~~~~~~~~~~l~~-~gV~v~~~~~v~~v~--~~~v~~~~~~~G~~~~i~~D~ 326 (485)
.+ ..+...+.+.+++ .||+++ ++.|+++. ++.+..+...+|.. +.+|.
T Consensus 96 ~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~--I~Ad~ 172 (651)
T 3ces_A 96 IDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLK--FRAKA 172 (651)
T ss_dssp HHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEE--EEEEE
T ss_pred hhhcccchhhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCE--EECCE
Confidence 01 1345566777777 699994 67899884 45565555567754 99999
Q ss_pred EEEccCC
Q 011476 327 VVWSTGI 333 (485)
Q Consensus 327 vi~a~G~ 333 (485)
||+|+|.
T Consensus 173 VVLATGt 179 (651)
T 3ces_A 173 VVLTVGT 179 (651)
T ss_dssp EEECCST
T ss_pred EEEcCCC
Confidence 9999995
No 271
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.84 E-value=8.8e-05 Score=75.09 Aligned_cols=95 Identities=19% Similarity=0.136 Sum_probs=69.8
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc------------------------------
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN------------------------------ 274 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~------------------------------ 274 (485)
+|+|||||+.|+-+|..|++. |.+|+|+++.+....
T Consensus 8 dVvIVGaG~aGl~aA~~La~~--------------G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~ 73 (453)
T 3atr_A 8 DVLIIGGGFAGSSAAYQLSRR--------------GLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENK 73 (453)
T ss_dssp SEEEECCSHHHHHHHHHHSSS--------------SCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhh
Confidence 899999999999999999885 678888877643100
Q ss_pred ----------------------cc-cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEE---EEEcCCCeEEEEecCe
Q 011476 275 ----------------------MF-DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIF---TKVRGNGETSSMPYGM 326 (485)
Q Consensus 275 ----------------------~~-~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~---~~~~~~G~~~~i~~D~ 326 (485)
.+ ...+.+.+.+.+++.|++++++++|+++.. +.+. +....+|+..++.+|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~ 153 (453)
T 3atr_A 74 INGIKLYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKV 153 (453)
T ss_dssp EEEEEEECTTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSE
T ss_pred hcceEEECCCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCE
Confidence 00 124556677777889999999999999863 4443 2221167655699999
Q ss_pred EEEccCC
Q 011476 327 VVWSTGI 333 (485)
Q Consensus 327 vi~a~G~ 333 (485)
||.|+|.
T Consensus 154 VV~AdG~ 160 (453)
T 3atr_A 154 VVEATGY 160 (453)
T ss_dssp EEECCGG
T ss_pred EEECcCC
Confidence 9999994
No 272
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.83 E-value=4e-05 Score=81.89 Aligned_cols=103 Identities=17% Similarity=0.168 Sum_probs=74.6
Q ss_pred CCCeEEEEC--CcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEE
Q 011476 57 KKKKVVVLG--TGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (485)
Q Consensus 57 ~~~~vvIIG--~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v 134 (485)
..++|+||| +|+.|+.+|..|+..|.+|+++++.+.+... .........+.+.+++.|+++ +.++++
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~----------~~~~~~~~~l~~~l~~~GV~i-~~~~~V 590 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSW----------TNNTFEVNRIQRRLIENGVAR-VTDHAV 590 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGG----------GGGGTCHHHHHHHHHHTTCEE-EESEEE
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccc----------cccchhHHHHHHHHHHCCCEE-EcCcEE
Confidence 456899999 9999999999999999999999987653211 011123445677788899887 467889
Q ss_pred EEEecCCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCC
Q 011476 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (485)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~ 177 (485)
..++.++..+.... .++...+.+|.||+|+|..|+.
T Consensus 591 ~~i~~~~~~v~~~~-------~~~~~~i~aD~VV~A~G~~p~~ 626 (690)
T 3k30_A 591 VAVGAGGVTVRDTY-------ASIERELECDAVVMVTARLPRE 626 (690)
T ss_dssp EEEETTEEEEEETT-------TCCEEEEECSEEEEESCEEECC
T ss_pred EEEECCeEEEEEcc-------CCeEEEEECCEEEECCCCCCCh
Confidence 99987543333221 1123479999999999998863
No 273
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.83 E-value=0.00019 Score=70.60 Aligned_cols=50 Identities=22% Similarity=0.086 Sum_probs=37.4
Q ss_pred HHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 281 TAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 281 ~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
...+.+.+++.|++++.+++|+++.. +.+..+...+| . +.+|.||+|+|.
T Consensus 152 ~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~--i~a~~VV~A~G~ 203 (382)
T 1y56_B 152 TTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-I--IKTGIVVNATNA 203 (382)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-E--EECSEEEECCGG
T ss_pred HHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-E--EECCEEEECcch
Confidence 34466777888999999999999863 45552333455 3 999999999993
No 274
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.82 E-value=9.8e-05 Score=70.38 Aligned_cols=94 Identities=14% Similarity=0.170 Sum_probs=62.3
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcc---cc---c------c-ccHHHHHHHHHHHHhC
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH---IL---N------M-FDKRITAFAEEKFSRD 291 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~---~l---~------~-~~~~~~~~~~~~l~~~ 291 (485)
.|+|||||+.|+.+|..+++. |.+|+|+++... +. + . .++++.+...+.+.+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~--------------g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRA--------------RKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKY 73 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTS
T ss_pred CEEEECCCHHHHHHHHHHHHC--------------CCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhc
Confidence 699999999999999999886 689999997642 00 1 1 1244555555555555
Q ss_pred -CcEEEcCceEEEEe---CCcEEEEEcCCCeEEEEecCeEEEccCCCCCcc
Q 011476 292 -GIDVKLGSMVVKVT---DKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAI 338 (485)
Q Consensus 292 -gV~v~~~~~v~~v~---~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~ 338 (485)
++.++... +..+. .+..++.. .+|++ +.+|.||+||| ..|.
T Consensus 74 ~~~~~~~~~-~~~~~~~~~~~~~v~~-~~g~~--~~a~~liiATG--s~p~ 118 (304)
T 4fk1_A 74 PSVHYYEKT-VVMITKQSTGLFEIVT-KDHTK--YLAERVLLATG--MQEE 118 (304)
T ss_dssp TTEEEEECC-EEEEEECTTSCEEEEE-TTCCE--EEEEEEEECCC--CEEE
T ss_pred CCEEEEeeE-EEEeeecCCCcEEEEE-CCCCE--EEeCEEEEccC--Cccc
Confidence 45555544 44442 22344444 56765 89999999999 4543
No 275
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.82 E-value=9.1e-06 Score=81.52 Aligned_cols=41 Identities=17% Similarity=0.236 Sum_probs=37.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCC-CcEEEEcCCCCcccCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPS-YDVQVISPRNYFAFTP 97 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g-~~V~lie~~~~~~~~~ 97 (485)
.+++|+|||||++||+||++|++.| ++|+|+|+++.+|+..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~ 46 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKC 46 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcc
Confidence 4579999999999999999999999 9999999999998853
No 276
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.81 E-value=2.6e-05 Score=82.37 Aligned_cols=34 Identities=6% Similarity=0.090 Sum_probs=31.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC------CCcEEEEcCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNP------SYDVQVISPRN 91 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~------g~~V~lie~~~ 91 (485)
.+||||||||.||++||+.|++. |.+|+|||+..
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~ 61 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKAS 61 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSC
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecC
Confidence 47999999999999999999976 99999999864
No 277
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.80 E-value=1e-05 Score=81.98 Aligned_cols=41 Identities=22% Similarity=0.219 Sum_probs=38.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~ 97 (485)
..+||||||||++|++||..|++.|++|+|+|+++++|+..
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 50 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEA 50 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccc
Confidence 45799999999999999999999999999999999999864
No 278
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.79 E-value=0.00013 Score=71.85 Aligned_cols=61 Identities=21% Similarity=0.240 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhC
Q 011476 279 RITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVG 347 (485)
Q Consensus 279 ~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g 347 (485)
.+...+.+.+++.|+++++++.|+++.. +.+.+.. .+| ++.+|.||+|+|. . ...++..++
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~-~~g---~~~a~~vV~A~G~--~--s~~l~~~~~ 227 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKT-PSG---DVWANHVVVASGV--W--SGMFFKQLG 227 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEE-TTE---EEEEEEEEECCGG--G--THHHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEc-CCc---eEEcCEEEECCCh--h--HHHHHHhcC
Confidence 4556677888889999999999999964 3464433 445 3899999999993 2 224555554
No 279
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.79 E-value=0.00013 Score=72.73 Aligned_cols=101 Identities=20% Similarity=0.314 Sum_probs=70.1
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCce-EEEEecCcccccc-----c----------------------
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVK-ITLLEAADHILNM-----F---------------------- 276 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~-Vtlv~~~~~~l~~-----~---------------------- 276 (485)
+|+|||||+.|+-+|..|++. |.+ |+|+++.+.+.+. +
T Consensus 6 dVvIVGaG~aGl~~A~~L~~~--------------G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~ 71 (410)
T 3c96_A 6 DILIAGAGIGGLSCALALHQA--------------GIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAI 71 (410)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSE
T ss_pred eEEEECCCHHHHHHHHHHHhC--------------CCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCC
Confidence 899999999999999999986 678 8888876542100 0
Q ss_pred ----------------------------------cHHHHHHHHHHHHh-CC-cEEEcCceEEEEeC-CcEEEEEcC--CC
Q 011476 277 ----------------------------------DKRITAFAEEKFSR-DG-IDVKLGSMVVKVTD-KEIFTKVRG--NG 317 (485)
Q Consensus 277 ----------------------------------~~~~~~~~~~~l~~-~g-V~v~~~~~v~~v~~-~~v~~~~~~--~G 317 (485)
...+...+.+.+++ .| ++++++++|++++. +++.+...+ +|
T Consensus 72 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~~~~v~v~~~~~~~g 151 (410)
T 3c96_A 72 PTHELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEERDGRVLIGARDGHG 151 (410)
T ss_dssp EECEEEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEEETTEEEEEEEETTS
T ss_pred CcceEEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEecCCccEEEEecCCCC
Confidence 01334455566665 35 68999999999863 445544322 37
Q ss_pred eEEEEecCeEEEccCCCCCcchHH
Q 011476 318 ETSSMPYGMVVWSTGIAPHAIIKD 341 (485)
Q Consensus 318 ~~~~i~~D~vi~a~G~~~~p~~~~ 341 (485)
+..++.+|.||.|.| ....+..
T Consensus 152 ~~~~~~ad~vV~AdG--~~S~vR~ 173 (410)
T 3c96_A 152 KPQALGADVLVGADG--IHSAVRA 173 (410)
T ss_dssp CEEEEEESEEEECCC--TTCHHHH
T ss_pred CceEEecCEEEECCC--ccchhHH
Confidence 544599999999999 4544433
No 280
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.78 E-value=2.6e-05 Score=79.95 Aligned_cols=101 Identities=15% Similarity=0.273 Sum_probs=71.7
Q ss_pred CeEEEECCcHHHHHHHHhcCC--------------CCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCC
Q 011476 59 KKVVVLGTGWAGTSFLKNLNN--------------PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKN 124 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~--------------~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 124 (485)
.+++|||||+.|+.+|..|+. ...+|+|+|+.+.+. +.+ ..++.....+.+++.|
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il-----~~~------~~~~~~~~~~~L~~~G 286 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL-----NMF------EKKLSSYAQSHLENTS 286 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS-----TTS------CHHHHHHHHHHHHHTT
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc-----cCC------CHHHHHHHHHHHHhcc
Confidence 479999999999999988763 236799999887532 111 1255666788899999
Q ss_pred CeEEEEEeEEEEEecCCCEEEEecCCccCCCCC-ceEEeecCEEEEccCCCCC
Q 011476 125 VDICFWEAECFKIDAENKKVYCRSSQNTNLNGK-EEFCMDYDYLVIAMGARAN 176 (485)
Q Consensus 125 v~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~-~~~~~~yd~lviAtG~~~~ 176 (485)
|+++ .++.|..++.+...+.....+ +. .+.++.+|.||+|+|..|+
T Consensus 287 V~v~-~~~~v~~v~~~~~~~~~~~~d-----g~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 287 IKVH-LRTAVAKVEEKQLLAKTKHED-----GKITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp CEEE-TTEEEEEECSSEEEEEEECTT-----SCEEEEEEECSEEEECCCEECC
T ss_pred eeee-cCceEEEEeCCceEEEEEecC-----cccceeeeccCEEEEccCCcCC
Confidence 9984 688899998754433332211 11 1247999999999998775
No 281
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.77 E-value=8.3e-06 Score=84.16 Aligned_cols=40 Identities=30% Similarity=0.421 Sum_probs=37.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCC-CcEEEEcCCCCcccCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPS-YDVQVISPRNYFAFTP 97 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g-~~V~lie~~~~~~~~~ 97 (485)
.++|+|||||++||+||+.|.+.| ++|+|+|+++.+|+..
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 479999999999999999999999 9999999999999863
No 282
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.75 E-value=1.4e-05 Score=81.41 Aligned_cols=42 Identities=17% Similarity=0.241 Sum_probs=37.0
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCC
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~ 97 (485)
...++|+|||||++|++||+.|++.|++|+|+|+++.+|+..
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAV 55 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 446799999999999999999999999999999999998854
No 283
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.75 E-value=1.7e-05 Score=81.13 Aligned_cols=41 Identities=32% Similarity=0.323 Sum_probs=37.8
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccC
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT 96 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~ 96 (485)
...++|+|||||++||+||+.|++.|++|+|+|+++..|+.
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGR 49 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCc
Confidence 34679999999999999999999999999999999988885
No 284
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.72 E-value=7.2e-06 Score=83.28 Aligned_cols=39 Identities=18% Similarity=0.288 Sum_probs=36.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCC------CcEEEEcCCCCcccC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPS------YDVQVISPRNYFAFT 96 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g------~~V~lie~~~~~~~~ 96 (485)
+++|+|||||++||+||++|++.| ++|+|+|+++.+|+.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~ 49 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGK 49 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCce
Confidence 579999999999999999999988 999999999988875
No 285
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.71 E-value=0.00026 Score=69.91 Aligned_cols=95 Identities=23% Similarity=0.369 Sum_probs=67.1
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc------------------------------
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN------------------------------ 274 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~------------------------------ 274 (485)
+|+|||||+.|+-+|..|++. |.+|+|+++.+.+..
T Consensus 6 dVvIvG~G~aGl~~A~~La~~--------------G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~ 71 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKY--------------GLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVK 71 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEES
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcc
Confidence 799999999999999999986 567777766542100
Q ss_pred -------------cc--------------cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEE-EEEcCCCeEEEEec
Q 011476 275 -------------MF--------------DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIF-TKVRGNGETSSMPY 324 (485)
Q Consensus 275 -------------~~--------------~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~-~~~~~~G~~~~i~~ 324 (485)
.+ ...+...+.+.+++.|++++.+++|+++.. +.+. +.....+...++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a 151 (397)
T 3cgv_A 72 GARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRA 151 (397)
T ss_dssp EEEEECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred eEEEEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEc
Confidence 00 012446677777888999999999999863 4443 22212234445999
Q ss_pred CeEEEccCC
Q 011476 325 GMVVWSTGI 333 (485)
Q Consensus 325 D~vi~a~G~ 333 (485)
|.||.|.|.
T Consensus 152 ~~vV~A~G~ 160 (397)
T 3cgv_A 152 KMVIAADGF 160 (397)
T ss_dssp EEEEECCCT
T ss_pred CEEEECCCc
Confidence 999999994
No 286
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.71 E-value=0.00017 Score=69.88 Aligned_cols=94 Identities=17% Similarity=0.229 Sum_probs=63.9
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccccc-----------------------ccH---
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-----------------------FDK--- 278 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~-----------------------~~~--- 278 (485)
+|+|||||++|+-+|..|.+.. ..|.+|+|+++.+..... .+.
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~-----------~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~ 71 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQT-----------SGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAK 71 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC------------CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHH
T ss_pred cEEEECCcHHHHHHHHHHHhhc-----------cCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHH
Confidence 7999999999999999999810 027899999876432100 000
Q ss_pred HHH--------------------------------------HHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCe
Q 011476 279 RIT--------------------------------------AFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGE 318 (485)
Q Consensus 279 ~~~--------------------------------------~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~ 318 (485)
... ..+....++.|+++++++.|++|+. +++.+.. .+|+
T Consensus 72 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~-~~g~ 150 (342)
T 3qj4_A 72 KHQRFYDELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSK-QTGS 150 (342)
T ss_dssp HTHHHHHHHHHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEE-SSSC
T ss_pred HHHHHHHHHHhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEE-CCCC
Confidence 111 1122233334899999999999963 4566554 5676
Q ss_pred EEEEecCeEEEccC
Q 011476 319 TSSMPYGMVVWSTG 332 (485)
Q Consensus 319 ~~~i~~D~vi~a~G 332 (485)
. +.+|.||+|++
T Consensus 151 ~--~~ad~vV~A~p 162 (342)
T 3qj4_A 151 P--EQFDLIVLTMP 162 (342)
T ss_dssp C--EEESEEEECSC
T ss_pred E--EEcCEEEECCC
Confidence 5 78999999997
No 287
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.70 E-value=0.00028 Score=73.37 Aligned_cols=92 Identities=22% Similarity=0.320 Sum_probs=67.9
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcc-cc-----------------------cc-----
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH-IL-----------------------NM----- 275 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~-~l-----------------------~~----- 275 (485)
.|+|||||+.|+++|..+++. |.+|.|+++.+. +. ..
T Consensus 29 DVIVIGgG~AGl~AAlalAr~--------------G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~ 94 (637)
T 2zxi_A 29 DVVVIGGGHAGIEAALAAARM--------------GAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKA 94 (637)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHC--------------CCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHH
Confidence 799999999999999999996 689999988631 10 00
Q ss_pred -------------------------cc-HHHHHHHHHHHHh-CCcEEEcCceEEEEe--CCcEEEEEcCCCeEEEEecCe
Q 011476 276 -------------------------FD-KRITAFAEEKFSR-DGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGM 326 (485)
Q Consensus 276 -------------------------~~-~~~~~~~~~~l~~-~gV~v~~~~~v~~v~--~~~v~~~~~~~G~~~~i~~D~ 326 (485)
.+ ..+...+.+.+++ .||+++ ++.|+++. ++.+..+.+.+|.. +.+|.
T Consensus 95 ~d~~gi~f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~--i~Ada 171 (637)
T 2zxi_A 95 IDQTGIQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVE--YKTKA 171 (637)
T ss_dssp HHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCE--EECSE
T ss_pred hhhcccceeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcE--EEeCE
Confidence 00 1344556677777 599994 67898874 45565555567765 99999
Q ss_pred EEEccCC
Q 011476 327 VVWSTGI 333 (485)
Q Consensus 327 vi~a~G~ 333 (485)
||+|+|.
T Consensus 172 VVLATG~ 178 (637)
T 2zxi_A 172 VVVTTGT 178 (637)
T ss_dssp EEECCTT
T ss_pred EEEccCC
Confidence 9999994
No 288
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.70 E-value=0.00016 Score=74.89 Aligned_cols=99 Identities=12% Similarity=0.216 Sum_probs=71.2
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc--------c-------------cc------
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL--------N-------------MF------ 276 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l--------~-------------~~------ 276 (485)
.+|+|||||+.|+.+|..|.+. |.+|+|+++.+.+. | .+
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~--------------G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~ 82 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLREL--------------GRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQ 82 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhh
Confidence 3899999999999999999986 68999999875421 0 00
Q ss_pred ----------cHHHHHHHHHHHHhCC--cEEEcCceEEEEeC--C--cEEEEEcCCCeEEEEecCeEEEccCCCCCcch
Q 011476 277 ----------DKRITAFAEEKFSRDG--IDVKLGSMVVKVTD--K--EIFTKVRGNGETSSMPYGMVVWSTGIAPHAII 339 (485)
Q Consensus 277 ----------~~~~~~~~~~~l~~~g--V~v~~~~~v~~v~~--~--~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~ 339 (485)
..++.+++....++.+ +.++++++|++++. + ...+. ..+|++ +.+|.||+|+|....|..
T Consensus 83 ~~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~-~~~G~~--~~ad~vV~AtG~~s~p~~ 158 (542)
T 1w4x_A 83 EWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVD-TNHGDR--IRARYLIMASGQLSVPQL 158 (542)
T ss_dssp HCCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEE-ETTCCE--EEEEEEEECCCSCCCCCC
T ss_pred ccCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEE-ECCCCE--EEeCEEEECcCCCCCCCC
Confidence 1334556666666665 67899999999863 2 24444 356764 899999999996445543
No 289
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.70 E-value=1.9e-05 Score=78.15 Aligned_cols=43 Identities=19% Similarity=0.327 Sum_probs=38.6
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCC
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL 98 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~ 98 (485)
...++|+|||||++|+++|+.|++.|++|+|+|+++.+|+...
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGC
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccc
Confidence 3468999999999999999999999999999999998888543
No 290
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.69 E-value=0.00025 Score=73.29 Aligned_cols=55 Identities=13% Similarity=0.304 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEe--CC----cEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 279 RITAFAEEKFSRDGIDVKLGSMVVKVT--DK----EIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 279 ~~~~~~~~~l~~~gV~v~~~~~v~~v~--~~----~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
.+...+.+.+++.|++++++++|++++ ++ ++++.....+...++.+|.||.|.|.
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~ 181 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGN 181 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCC
Confidence 455667778888899999999999996 34 55554322222345999999999994
No 291
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.67 E-value=0.00019 Score=70.69 Aligned_cols=95 Identities=22% Similarity=0.347 Sum_probs=68.6
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc------------------------------
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN------------------------------ 274 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~------------------------------ 274 (485)
.|+|||||++|+-+|..|++. |.+|+|+++++.+..
T Consensus 6 DViIVGaGpaGl~~A~~La~~--------------G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~ 71 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKY--------------GLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVK 71 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEES
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccc
Confidence 699999999999999999997 678888876543200
Q ss_pred --------------------------cc-cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEE-EcCCCeEEEEec
Q 011476 275 --------------------------MF-DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTK-VRGNGETSSMPY 324 (485)
Q Consensus 275 --------------------------~~-~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~-~~~~G~~~~i~~ 324 (485)
.+ -..+...+.+.+++.|++++.+++++.+.. +.+..+ ...+|+..++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a 151 (397)
T 3oz2_A 72 GARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRA 151 (397)
T ss_dssp EEEEECTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred eEEEEeCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEE
Confidence 00 023445667777888999999999998753 343322 223566667999
Q ss_pred CeEEEccCC
Q 011476 325 GMVVWSTGI 333 (485)
Q Consensus 325 D~vi~a~G~ 333 (485)
|+||-|.|.
T Consensus 152 ~~vIgAdG~ 160 (397)
T 3oz2_A 152 KMVIAADGF 160 (397)
T ss_dssp EEEEECCCT
T ss_pred eEEEeCCcc
Confidence 999999994
No 292
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.66 E-value=0.00023 Score=73.13 Aligned_cols=96 Identities=21% Similarity=0.293 Sum_probs=69.5
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcc----------------ccc-------------
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH----------------ILN------------- 274 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~----------------~l~------------- 274 (485)
.+|+|||||+.|+-+|..|++. |.+|+|+++.+. ++.
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~--------------G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~ 73 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMR--------------GHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGF 73 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT--------------TCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTC
T ss_pred CCEEEECcCHHHHHHHHHHHhC--------------CCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCC
Confidence 3899999999999999999985 678888877641 000
Q ss_pred ---------------------------------cc-cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEE--EEEcCC
Q 011476 275 ---------------------------------MF-DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIF--TKVRGN 316 (485)
Q Consensus 275 ---------------------------------~~-~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~--~~~~~~ 316 (485)
.+ ...+...+.+.+++.||+++.+++|+++.. +.+. .....+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~d 153 (512)
T 3e1t_A 74 PIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTE 153 (512)
T ss_dssp CEECEEEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSS
T ss_pred ccccCceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCC
Confidence 00 123445667777889999999999999864 3332 222356
Q ss_pred CeEEEEecCeEEEccCC
Q 011476 317 GETSSMPYGMVVWSTGI 333 (485)
Q Consensus 317 G~~~~i~~D~vi~a~G~ 333 (485)
|+..++.+|.||.|+|.
T Consensus 154 G~~~~i~ad~VI~AdG~ 170 (512)
T 3e1t_A 154 GVELMAHARFIVDASGN 170 (512)
T ss_dssp SCEEEEEEEEEEECCCT
T ss_pred CCEEEEEcCEEEECCCc
Confidence 76556999999999995
No 293
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.66 E-value=2.2e-05 Score=80.42 Aligned_cols=40 Identities=18% Similarity=0.398 Sum_probs=37.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~ 97 (485)
.++|+|||||++||+||+.|++.|++|+|+|+++.+|+..
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~ 78 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRS 78 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcc
Confidence 3799999999999999999999999999999999998853
No 294
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.66 E-value=1.8e-05 Score=78.74 Aligned_cols=41 Identities=17% Similarity=0.302 Sum_probs=37.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC-CCcEEEEcCCCCcccCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNP-SYDVQVISPRNYFAFTPL 98 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~-g~~V~lie~~~~~~~~~~ 98 (485)
.++|+|||||++|++||+.|++. |++|+|+|+++.+|+...
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~ 48 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAY 48 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGC
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeee
Confidence 57999999999999999999988 999999999999988643
No 295
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.66 E-value=1.7e-05 Score=79.88 Aligned_cols=36 Identities=31% Similarity=0.379 Sum_probs=31.9
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
.++++|+||||||+|+++|..|++.|++|+|||+.+
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 356799999999999999999999999999999876
No 296
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.65 E-value=0.0001 Score=77.49 Aligned_cols=104 Identities=15% Similarity=0.219 Sum_probs=67.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~i 137 (485)
+++|+|||||+.|+.+|..|++.|.+|+++++.. +++.. ..++...+.+.+++.|+++. ....+..+
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~------~l~~~------d~~~~~~~~~~l~~~gv~i~-~~~~v~~v 352 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRSI------LLRGF------DQQMAEKVGDYMENHGVKFA-KLCVPDEI 352 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC------SSTTS------CHHHHHHHHHHHHHTTCEEE-ETEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCc------CcCcC------CHHHHHHHHHHHHhCCCEEE-ECCeEEEE
Confidence 5689999999999999999999999999999761 11111 11344556677888898863 45555555
Q ss_pred ec---------CCCEEEEecCCccCCCCCceEEeecCEEEEccCCCCCCC
Q 011476 138 DA---------ENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (485)
Q Consensus 138 d~---------~~~~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~~ 178 (485)
.. ....+.+... ..++++..+.+|.||+|+|.+|+..
T Consensus 353 ~~~~~~~~~~~~~~~~~v~~~----~~~g~~~~~~~D~vi~a~G~~p~~~ 398 (598)
T 2x8g_A 353 KQLKVVDTENNKPGLLLVKGH----YTDGKKFEEEFETVIFAVGREPQLS 398 (598)
T ss_dssp EEEECCBTTTTBCCEEEEEEE----ETTSCEEEEEESEEEECSCEEECGG
T ss_pred EeccccccccCCCceEEEEEE----eCCCcEEeccCCEEEEEeCCccccC
Confidence 31 1133332210 0022233456999999999998753
No 297
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.65 E-value=1.9e-05 Score=79.94 Aligned_cols=69 Identities=16% Similarity=0.281 Sum_probs=49.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCc-cc--cc---ccccchHHHHhhCCCeE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGT-VE--AR---SIVEPVRNIVRKKNVDI 127 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~-~~--~~---~~~~~~~~~~~~~gv~v 127 (485)
.++|+|||||++||+||++|++.|++|+|+|+++.+|+....... .+. .+ .. .....+.+++++.|+..
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~~g~~~ 79 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTI-DGAVLEIGGQWVSPDQTALISLLDELGLKT 79 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEE-TTEEEECSCCCBCTTCHHHHHHHHHTTCCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceecccc-CCceeccCCeEecCccHHHHHHHHHcCCcc
Confidence 479999999999999999999999999999999988886432211 111 00 00 11234667788888663
No 298
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.63 E-value=0.00035 Score=69.47 Aligned_cols=92 Identities=16% Similarity=0.298 Sum_probs=66.5
Q ss_pred cccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc----------------------------
Q 011476 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN---------------------------- 274 (485)
Q Consensus 223 ~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~---------------------------- 274 (485)
..+|+|||||++|+-+|..|++. |.+|+|+++.+.+.+
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~--------------G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~ 88 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQS--------------GIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFG 88 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhc
Confidence 35899999999999999999996 678888887653210
Q ss_pred ------------------cc-----------------cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCC
Q 011476 275 ------------------MF-----------------DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNG 317 (485)
Q Consensus 275 ------------------~~-----------------~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G 317 (485)
.+ ...+...+.+.+.+ ++++++++|++++. +++.+.. .+|
T Consensus 89 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~-~~g 165 (407)
T 3rp8_A 89 GPLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWF-TDG 165 (407)
T ss_dssp CCCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEE-TTS
T ss_pred CCCcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEE-cCC
Confidence 00 01233444455544 88999999999863 4566554 677
Q ss_pred eEEEEecCeEEEccCC
Q 011476 318 ETSSMPYGMVVWSTGI 333 (485)
Q Consensus 318 ~~~~i~~D~vi~a~G~ 333 (485)
++ +.+|+||.|.|.
T Consensus 166 ~~--~~a~~vV~AdG~ 179 (407)
T 3rp8_A 166 SS--ASGDLLIAADGS 179 (407)
T ss_dssp CE--EEESEEEECCCT
T ss_pred CE--EeeCEEEECCCc
Confidence 65 999999999994
No 299
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.63 E-value=3e-05 Score=79.58 Aligned_cols=41 Identities=22% Similarity=0.250 Sum_probs=37.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~ 97 (485)
..++|+|||||++||+||+.|++.|++|+|+|+++.+|+..
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCce
Confidence 35799999999999999999999999999999999988853
No 300
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.63 E-value=5.1e-05 Score=80.56 Aligned_cols=35 Identities=29% Similarity=0.456 Sum_probs=32.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCC-----CCCcEEEEcCCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNN-----PSYDVQVISPRNY 92 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~-----~g~~V~lie~~~~ 92 (485)
.++|+||||||+|+++|..|++ .|++|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 5799999999999999999999 9999999998753
No 301
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.61 E-value=2.9e-05 Score=76.37 Aligned_cols=39 Identities=23% Similarity=0.324 Sum_probs=36.3
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCC
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~ 97 (485)
++|+|||||++|+++|..|++.|++|+|+|+++.+|+..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 40 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNA 40 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcce
Confidence 589999999999999999999999999999999888853
No 302
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.60 E-value=4.3e-05 Score=77.46 Aligned_cols=89 Identities=18% Similarity=0.151 Sum_probs=66.2
Q ss_pred cccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc--------ccc--cHHHHHHHHHHHHhCC
Q 011476 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL--------NMF--DKRITAFAEEKFSRDG 292 (485)
Q Consensus 223 ~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l--------~~~--~~~~~~~~~~~l~~~g 292 (485)
.++|+|||||+.|+.+|..|.+.+ ++.+|+++++.+.+. +.+ ..++...+.+.+++.|
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g------------~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~g 73 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHH------------SRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDR 73 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC------------SSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTT
T ss_pred CceEEEECcCHHHHHHHHHHHhcC------------CCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCC
Confidence 358999999999999999999872 238999999987654 222 2356677778888999
Q ss_pred cEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 293 V~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
|+++.++.+. ..+.. .+. .+.+|.||+|||.
T Consensus 74 v~~~~~~~v~----~~V~~---~~~---~~~~d~lVlAtGs 104 (460)
T 1cjc_A 74 CAFYGNVEVG----RDVTV---QEL---QDAYHAVVLSYGA 104 (460)
T ss_dssp EEEEBSCCBT----TTBCH---HHH---HHHSSEEEECCCC
T ss_pred cEEEeeeEEe----eEEEe---ccc---eEEcCEEEEecCc
Confidence 9999987762 12211 122 2789999999995
No 303
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.59 E-value=7.4e-05 Score=76.51 Aligned_cols=93 Identities=24% Similarity=0.400 Sum_probs=66.1
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc----------cc---cHHHHHHHHHHHHh
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN----------MF---DKRITAFAEEKFSR 290 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~----------~~---~~~~~~~~~~~l~~ 290 (485)
.+|+|||||+.|+.+|..|.+. .+|+|+++.+.+.. .+ ..++...+.+.+ +
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~---------------~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~ 172 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY---------------LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-N 172 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT---------------CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-C
T ss_pred CCEEEECccHHHHHHHHHHHhc---------------CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-h
Confidence 4899999999999999999873 58999998875421 11 122333333444 5
Q ss_pred CCcEEEcCceEEEEeCC--cEEEEEcCCCeEEEEecCeEEEccC
Q 011476 291 DGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTG 332 (485)
Q Consensus 291 ~gV~v~~~~~v~~v~~~--~v~~~~~~~G~~~~i~~D~vi~a~G 332 (485)
.||++++++.+.++..+ .+.+....+++..++.+|.+|+|+|
T Consensus 173 ~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtG 216 (493)
T 1y56_A 173 ENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATG 216 (493)
T ss_dssp TTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCC
T ss_pred cCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCC
Confidence 69999999999888643 2433332356545699999999999
No 304
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.58 E-value=3.1e-05 Score=79.36 Aligned_cols=42 Identities=26% Similarity=0.246 Sum_probs=38.1
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCC
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~ 97 (485)
..+++|+|||||++|+++|+.|++.|++|+|+|+++..++..
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRV 72 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCce
Confidence 346799999999999999999999999999999999888853
No 305
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.56 E-value=0.00041 Score=67.89 Aligned_cols=51 Identities=10% Similarity=0.063 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 279 RITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 279 ~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
.+...+.+.+++.|++++.+++|++++. +.+.+.. .+|+ +.+|.||+|+|.
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~-~~g~---~~a~~vV~a~G~ 202 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIET-ADGE---YQAKKAIVCAGT 202 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEE-SSCE---EEEEEEEECCGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEE-CCCe---EEcCEEEEcCCc
Confidence 3445566777788999999999999963 4455543 4564 899999999994
No 306
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.56 E-value=0.0005 Score=71.65 Aligned_cols=92 Identities=15% Similarity=0.242 Sum_probs=67.0
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcc-cc-----------------------cc-----
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH-IL-----------------------NM----- 275 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~-~l-----------------------~~----- 275 (485)
.|+|||||+.|+++|..+++. |.+|+|+++.+. +. ..
T Consensus 23 DVIVIGgG~AGl~AAlaLAr~--------------G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~ 88 (641)
T 3cp8_A 23 DVIVVGAGHAGCEAALAVARG--------------GLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKA 88 (641)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHH
T ss_pred CEEEECccHHHHHHHHHHHHC--------------CCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHH
Confidence 899999999999999999996 689999988631 10 00
Q ss_pred -------------------------cc-HHHHHHHHHHHHh-CCcEEEcCceEEEEe--CCcEEEEEcCCCeEEEEecCe
Q 011476 276 -------------------------FD-KRITAFAEEKFSR-DGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGM 326 (485)
Q Consensus 276 -------------------------~~-~~~~~~~~~~l~~-~gV~v~~~~~v~~v~--~~~v~~~~~~~G~~~~i~~D~ 326 (485)
.+ ..+...+.+.+++ .||+++. ..|+.+. ++.+..+...+|.. +.+|.
T Consensus 89 ~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~~--i~Ad~ 165 (641)
T 3cp8_A 89 IDATGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGRA--IQAKA 165 (641)
T ss_dssp HHHHEEEEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCE--EEEEE
T ss_pred HHhcCCchhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCcE--EEeCE
Confidence 01 1345566677777 4999965 4788864 45566444467764 99999
Q ss_pred EEEccCC
Q 011476 327 VVWSTGI 333 (485)
Q Consensus 327 vi~a~G~ 333 (485)
||+|+|.
T Consensus 166 VVLATG~ 172 (641)
T 3cp8_A 166 AILACGT 172 (641)
T ss_dssp EEECCTT
T ss_pred EEECcCC
Confidence 9999995
No 307
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.53 E-value=0.00056 Score=67.02 Aligned_cols=60 Identities=10% Similarity=0.028 Sum_probs=41.9
Q ss_pred HHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhC
Q 011476 280 ITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVG 347 (485)
Q Consensus 280 ~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g 347 (485)
+...+.+.+++.|+++++++.|+++.. +.+.+ .+.+| . +.+|.||+|+|. ....|+..++
T Consensus 156 ~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V-~t~~g-~--i~a~~VV~A~G~----~s~~l~~~~g 217 (381)
T 3nyc_A 156 LHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEV-RCDAG-S--YRAAVLVNAAGA----WCDAIAGLAG 217 (381)
T ss_dssp HHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEE-ECSSE-E--EEESEEEECCGG----GHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEE-EeCCC-E--EEcCEEEECCCh----hHHHHHHHhC
Confidence 344556677788999999999999863 44443 33455 3 899999999993 3335555554
No 308
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.53 E-value=0.00073 Score=70.53 Aligned_cols=68 Identities=13% Similarity=0.255 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEeC---CcEEEEEcC------CCeE-------EEEecCeEEEccCCCCCcch-HH
Q 011476 279 RITAFAEEKFSRDGIDVKLGSMVVKVTD---KEIFTKVRG------NGET-------SSMPYGMVVWSTGIAPHAII-KD 341 (485)
Q Consensus 279 ~~~~~~~~~l~~~gV~v~~~~~v~~v~~---~~v~~~~~~------~G~~-------~~i~~D~vi~a~G~~~~p~~-~~ 341 (485)
.+...+.+.+++.||++++++.++++.. +.+..+... +|+. .++.+|.||.|.|. ...+ ..
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~--~S~vr~~ 222 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGC--HGHLAKQ 222 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCT--TCHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCC--CchHHHH
Confidence 4566777888889999999999999853 235423222 4432 34999999999994 4433 34
Q ss_pred HHHHhCC
Q 011476 342 FMKQVGQ 348 (485)
Q Consensus 342 l~~~~g~ 348 (485)
+...+++
T Consensus 223 l~~~~gl 229 (584)
T 2gmh_A 223 LYKKFDL 229 (584)
T ss_dssp HHHHTTT
T ss_pred HHHHhCC
Confidence 4555554
No 309
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.52 E-value=0.00045 Score=71.88 Aligned_cols=94 Identities=24% Similarity=0.313 Sum_probs=70.1
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc-------------------------------
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL------------------------------- 273 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l------------------------------- 273 (485)
.|+|||||++|+-+|..|++. |.+|+|+++.+...
T Consensus 51 DVvIVGaG~aGL~~A~~La~~--------------G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~ 116 (570)
T 3fmw_A 51 DVVVVGGGPVGLMLAGELRAG--------------GVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQV 116 (570)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--------------TCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCB
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcc
Confidence 799999999999999999986 68899998753210
Q ss_pred ------c-----c---------------c-cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEc-CCCeEEEEe
Q 011476 274 ------N-----M---------------F-DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVR-GNGETSSMP 323 (485)
Q Consensus 274 ------~-----~---------------~-~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~-~~G~~~~i~ 323 (485)
. . + ...+...+.+.+++.|++++++++|++++. +++++... .+|+ .++.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~-~~~~ 195 (570)
T 3fmw_A 117 AKGLPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGP-YPVR 195 (570)
T ss_dssp CSBCCBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEE-EEEE
T ss_pred cCCceeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCc-EEEE
Confidence 0 0 0 134556677777888999999999999964 34554431 4563 3499
Q ss_pred cCeEEEccCC
Q 011476 324 YGMVVWSTGI 333 (485)
Q Consensus 324 ~D~vi~a~G~ 333 (485)
+|.||.|.|.
T Consensus 196 a~~vV~ADG~ 205 (570)
T 3fmw_A 196 ARYGVGCDGG 205 (570)
T ss_dssp ESEEEECSCS
T ss_pred eCEEEEcCCC
Confidence 9999999994
No 310
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.52 E-value=3.6e-05 Score=78.36 Aligned_cols=39 Identities=13% Similarity=0.256 Sum_probs=36.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCC--CcEEEEcCCCCcccC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPS--YDVQVISPRNYFAFT 96 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g--~~V~lie~~~~~~~~ 96 (485)
+++|+|||||++|+++|++|++.| ++|+|+|+++.+++.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~ 44 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGK 44 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTT
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCce
Confidence 479999999999999999999988 999999999888874
No 311
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.52 E-value=0.00023 Score=75.71 Aligned_cols=109 Identities=18% Similarity=0.157 Sum_probs=66.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEE---------------cCCCCcccCCC----------c---cccccCccc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVI---------------SPRNYFAFTPL----------L---PSVTCGTVE 108 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~li---------------e~~~~~~~~~~----------~---~~~~~~~~~ 108 (485)
..++|+|||||+.|+.+|..|++.|.+|+++ ++.......|. + +......+.
T Consensus 493 ~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~ 572 (671)
T 1ps9_A 493 VGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLG 572 (671)
T ss_dssp CCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSC
T ss_pred CCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccc
Confidence 4689999999999999999999888765532 10000000000 0 000000001
Q ss_pred ccccccchHHHHhhCCCeEEEEEeEEEEEecCCCEEEE-ecCCccCCCCCceEEeecCEEEEccCCCCCC
Q 011476 109 ARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYC-RSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (485)
Q Consensus 109 ~~~~~~~~~~~~~~~gv~v~~~~~~v~~id~~~~~v~~-~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~ 177 (485)
......+.+.+++.||++ +.+..+..++.+ .+.+ .++ +...+.+|.||+|+|..|+.
T Consensus 573 -~~~~~~~~~~l~~~GV~v-~~~~~v~~i~~~--~v~~~~~G--------~~~~i~~D~Vi~a~G~~p~~ 630 (671)
T 1ps9_A 573 -KTTGWIHRTTLLSRGVKM-IPGVSYQKIDDD--GLHVVING--------ETQVLAVDNVVICAGQEPNR 630 (671)
T ss_dssp -TTTHHHHHHHHHHTTCEE-ECSCEEEEEETT--EEEEEETT--------EEEEECCSEEEECCCEEECC
T ss_pred -cccHHHHHHHHHhcCCEE-EeCcEEEEEeCC--eEEEecCC--------eEEEEeCCEEEECCCccccH
Confidence 112223466778889887 357788888753 3555 333 23489999999999998864
No 312
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.52 E-value=0.0011 Score=65.46 Aligned_cols=59 Identities=19% Similarity=0.270 Sum_probs=41.2
Q ss_pred HHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhC
Q 011476 281 TAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVG 347 (485)
Q Consensus 281 ~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g 347 (485)
...+.+.+++.|+++++++.|+++.. +.+.+.. .+|+ +.+|.||+|+|. ....+++.++
T Consensus 156 ~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t-~~g~---i~a~~VV~A~G~----~s~~l~~~~g 216 (397)
T 2oln_A 156 LAALFTLAQAAGATLRAGETVTELVPDADGVSVTT-DRGT---YRAGKVVLACGP----YTNDLLEPLG 216 (397)
T ss_dssp HHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEE-SSCE---EEEEEEEECCGG----GHHHHHGGGT
T ss_pred HHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEE-CCCE---EEcCEEEEcCCc----ChHHHhhhcC
Confidence 34455666788999999999999863 4465543 4443 899999999993 2234555555
No 313
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.51 E-value=5.6e-05 Score=74.73 Aligned_cols=39 Identities=23% Similarity=0.496 Sum_probs=36.5
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCC
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~ 97 (485)
++|+|||||++|+++|+.|++.|++|+|+|+++.+|+..
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 42 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNS 42 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcc
Confidence 699999999999999999999999999999999888754
No 314
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.51 E-value=0.00083 Score=68.75 Aligned_cols=95 Identities=23% Similarity=0.314 Sum_probs=68.1
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc------------------------------
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL------------------------------ 273 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l------------------------------ 273 (485)
.+|+|||||++|+-+|..|++. |.+|+|+++.+...
T Consensus 12 ~dVlIVGaGpaGl~~A~~La~~--------------G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~ 77 (500)
T 2qa1_A 12 AAVIVVGAGPAGMMLAGELRLA--------------GVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVET 77 (500)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCB
T ss_pred CCEEEECcCHHHHHHHHHHHHC--------------CCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccc
Confidence 4899999999999999999996 56777776543210
Q ss_pred --------------------c---cc-cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCe-EEEEecCe
Q 011476 274 --------------------N---MF-DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGE-TSSMPYGM 326 (485)
Q Consensus 274 --------------------~---~~-~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~-~~~i~~D~ 326 (485)
+ .+ ...+...+.+.+++.|++++++++|++++. +++++.. .+++ ..++.+|.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~-~~~~g~~~~~a~~ 156 (500)
T 2qa1_A 78 STQGHFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEV-RGPEGKHTLRAAY 156 (500)
T ss_dssp CCEEEETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEE-EETTEEEEEEESE
T ss_pred cccccccceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEE-EcCCCCEEEEeCE
Confidence 0 00 134556677778888999999999999963 4555443 2232 34589999
Q ss_pred EEEccCC
Q 011476 327 VVWSTGI 333 (485)
Q Consensus 327 vi~a~G~ 333 (485)
||.|.|.
T Consensus 157 vVgADG~ 163 (500)
T 2qa1_A 157 LVGCDGG 163 (500)
T ss_dssp EEECCCT
T ss_pred EEECCCc
Confidence 9999994
No 315
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.50 E-value=0.00087 Score=68.58 Aligned_cols=95 Identities=24% Similarity=0.304 Sum_probs=68.7
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc------------------------------
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL------------------------------ 273 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l------------------------------ 273 (485)
.+|+|||||++|+-+|..|++. |.+|+|+++.+...
T Consensus 13 ~dVlIVGaGpaGl~~A~~La~~--------------G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~ 78 (499)
T 2qa2_A 13 ASVIVVGAGPAGLMLAGELRLG--------------GVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVET 78 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCE
T ss_pred CCEEEECcCHHHHHHHHHHHHC--------------CCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccc
Confidence 4899999999999999999996 56777776543210
Q ss_pred --------------------c---cc-cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEcCCCe-EEEEecCe
Q 011476 274 --------------------N---MF-DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGE-TSSMPYGM 326 (485)
Q Consensus 274 --------------------~---~~-~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~~~G~-~~~i~~D~ 326 (485)
+ .+ ...+...+.+.+++.|+++++++++++++. +++++.. .+++ ..++.+|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~-~~~~g~~~~~a~~ 157 (499)
T 2qa2_A 79 STQGHFGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEV-EGPDGPRSLTTRY 157 (499)
T ss_dssp ESEEEETTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEE-ECSSCEEEEEEEE
T ss_pred cccceecceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEE-EcCCCcEEEEeCE
Confidence 0 00 134556677778888999999999999963 4565543 2332 34599999
Q ss_pred EEEccCC
Q 011476 327 VVWSTGI 333 (485)
Q Consensus 327 vi~a~G~ 333 (485)
||.|.|.
T Consensus 158 vVgADG~ 164 (499)
T 2qa2_A 158 VVGCDGG 164 (499)
T ss_dssp EEECCCT
T ss_pred EEEccCc
Confidence 9999994
No 316
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.47 E-value=5.5e-05 Score=74.08 Aligned_cols=35 Identities=34% Similarity=0.488 Sum_probs=32.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
..+||+|||||++|+++|++|++.|++|+|+|+..
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 35799999999999999999999999999999875
No 317
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.46 E-value=0.0011 Score=67.96 Aligned_cols=62 Identities=16% Similarity=0.201 Sum_probs=43.0
Q ss_pred HHHHHHHHHHhCCcEEEcCceEEEEeC-CcEEEEEc---CCCeEEEEecCeEEEccCCCCCcchHHHHHH
Q 011476 280 ITAFAEEKFSRDGIDVKLGSMVVKVTD-KEIFTKVR---GNGETSSMPYGMVVWSTGIAPHAIIKDFMKQ 345 (485)
Q Consensus 280 ~~~~~~~~l~~~gV~v~~~~~v~~v~~-~~v~~~~~---~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~ 345 (485)
+...+.+.+++.|++++++++|+++.. +++..+.. .+|+..++.+|.||.|+| ++...+...
T Consensus 151 l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG----~~s~~l~~~ 216 (501)
T 2qcu_A 151 LVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATG----PWVKQFFDD 216 (501)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCG----GGHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCC----hhHHHHHHH
Confidence 455666777889999999999999863 23322222 357655699999999999 334455543
No 318
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.46 E-value=7e-05 Score=79.57 Aligned_cols=42 Identities=24% Similarity=0.395 Sum_probs=38.5
Q ss_pred CCCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccC
Q 011476 55 GIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT 96 (485)
Q Consensus 55 ~~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~ 96 (485)
....++|+|||||++|+++|++|.+.|++|+|+|+.+..|+.
T Consensus 104 ~~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~ 145 (662)
T 2z3y_A 104 TKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 145 (662)
T ss_dssp SSCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTT
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCc
Confidence 355789999999999999999999999999999999988875
No 319
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.45 E-value=7.4e-05 Score=83.30 Aligned_cols=90 Identities=18% Similarity=0.288 Sum_probs=67.8
Q ss_pred hcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCc-eEEEEecCccccc---------cccHHHHHHHHHHHHhC
Q 011476 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV-KITLLEAADHILN---------MFDKRITAFAEEKFSRD 291 (485)
Q Consensus 222 ~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~-~Vtlv~~~~~~l~---------~~~~~~~~~~~~~l~~~ 291 (485)
.+++|+|||||+.|+.+|..|++. |. +|+|+++.+.+.. .++.+...+..+.+++.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~--------------G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~ 251 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARL--------------GYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDL 251 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHT--------------TCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECccHHHHHHHHHHHhc--------------CCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHC
Confidence 567999999999999999999996 56 7999999875431 23455666667888999
Q ss_pred CcEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 292 GIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 292 gV~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
||++++++.+.. ..+.+ .++.. +.+|.||+|||.
T Consensus 252 gv~~~~~~~v~~---~~v~~---~~~~~--~~~d~vvlAtGa 285 (1025)
T 1gte_A 252 GVKIICGKSLSE---NEITL---NTLKE--EGYKAAFIGIGL 285 (1025)
T ss_dssp TCEEEESCCBST---TSBCH---HHHHH--TTCCEEEECCCC
T ss_pred CcEEEcccEecc---ceEEh---hhcCc--cCCCEEEEecCC
Confidence 999999987632 12221 22332 789999999994
No 320
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.44 E-value=0.0014 Score=67.31 Aligned_cols=55 Identities=16% Similarity=0.149 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEeC---CcEEEEE-cCCCeEEEEecC-eEEEccCC
Q 011476 279 RITAFAEEKFSRDGIDVKLGSMVVKVTD---KEIFTKV-RGNGETSSMPYG-MVVWSTGI 333 (485)
Q Consensus 279 ~~~~~~~~~l~~~gV~v~~~~~v~~v~~---~~v~~~~-~~~G~~~~i~~D-~vi~a~G~ 333 (485)
.+...+.+.+++.||+|++++.++++.. +.+..+. ..+|+..++.+| .||+|+|-
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG 262 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGS 262 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCC
Confidence 4455666777788999999999999853 3333221 135666679996 99999994
No 321
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.44 E-value=0.00015 Score=80.19 Aligned_cols=98 Identities=13% Similarity=0.117 Sum_probs=70.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEEEEE
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v~~i 137 (485)
.++|+|||+|+.|+.+|..|+..|.+|+|+++.+.+.. . .+.+++.||++ +....+..+
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~---------------~-----~~~l~~~GV~v-~~~~~v~~i 342 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA---------------A-----AAQAVADGVQV-ISGSVVVDT 342 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH---------------H-----HHHHHHTTCCE-EETEEEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch---------------h-----HHHHHhCCeEE-EeCCEeEEE
Confidence 47999999999999999999999999999998865320 0 34567889887 467778888
Q ss_pred ec--CCC--EEEEecCCccCCCCCceEEeecCEEEEccCCCCCC
Q 011476 138 DA--ENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (485)
Q Consensus 138 d~--~~~--~v~~~~~~~~~~~~~~~~~~~yd~lviAtG~~~~~ 177 (485)
.. +++ .+.+.+.... ..+++...+.+|.||+|+|..|+.
T Consensus 343 ~~~~~~~v~~v~~~~~~~~-~~~G~~~~i~~D~Vv~a~G~~P~~ 385 (965)
T 2gag_A 343 EADENGELSAIVVAELDEA-RELGGTQRFEADVLAVAGGFNPVV 385 (965)
T ss_dssp EECTTSCEEEEEEEEECTT-CCEEEEEEEECSEEEEECCEEECC
T ss_pred eccCCCCEEEEEEEecccc-CCCCceEEEEcCEEEECCCcCcCh
Confidence 76 333 4555530000 000112489999999999988864
No 322
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.43 E-value=0.00084 Score=71.46 Aligned_cols=49 Identities=12% Similarity=0.148 Sum_probs=37.0
Q ss_pred HHHHHHHHhCCcEEEcCceEEEEe--CCcEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 282 AFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 282 ~~~~~~l~~~gV~v~~~~~v~~v~--~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
..+.+.+++.|+++++++.|+++. ++++.+.. .+|.. +.+|.||+|+|.
T Consensus 421 ~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t-~~G~~--i~Ad~VVlAtG~ 471 (676)
T 3ps9_A 421 RNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNF-AGDQQ--ATHSVVVLANGH 471 (676)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEE-TTSCE--EEESEEEECCGG
T ss_pred HHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEE-CCCCE--EECCEEEECCCc
Confidence 344556677899999999999986 34554444 45654 899999999994
No 323
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.43 E-value=0.00092 Score=66.14 Aligned_cols=92 Identities=17% Similarity=0.215 Sum_probs=63.8
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc-------cccHHHH----------------
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-------MFDKRIT---------------- 281 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~-------~~~~~~~---------------- 281 (485)
||+|||||++|+-+|..|++. |.+|+|+++.+.+.. .+.+...
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~--------------G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~ 68 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKH--------------GIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFE 68 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHH
T ss_pred EEEEECcCHHHHHHHHHHHhC--------------CCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhh
Confidence 899999999999999999996 789999987654311 0111110
Q ss_pred -------------------------------------------HHHHHHHHh-CCcEEEcCceEEEEeC--C-cEEEEEc
Q 011476 282 -------------------------------------------AFAEEKFSR-DGIDVKLGSMVVKVTD--K-EIFTKVR 314 (485)
Q Consensus 282 -------------------------------------------~~~~~~l~~-~gV~v~~~~~v~~v~~--~-~v~~~~~ 314 (485)
..+.+.|.+ .+..+++++++++++. + .+++..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~- 147 (412)
T 4hb9_A 69 EASRYIGGQSRFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFF- 147 (412)
T ss_dssp HHCEEECCCCEEECTTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEE-
T ss_pred hhhcccCcceeEecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEE-
Confidence 112232322 3556888999998853 3 366554
Q ss_pred CCCeEEEEecCeEEEccCC
Q 011476 315 GNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 315 ~~G~~~~i~~D~vi~a~G~ 333 (485)
.||++ +.+|+||-|-|.
T Consensus 148 ~dG~~--~~adlvVgADG~ 164 (412)
T 4hb9_A 148 ADGSH--ENVDVLVGADGS 164 (412)
T ss_dssp TTSCE--EEESEEEECCCT
T ss_pred CCCCE--EEeeEEEECCCC
Confidence 68876 899999999994
No 324
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.43 E-value=0.00055 Score=67.84 Aligned_cols=93 Identities=16% Similarity=0.225 Sum_probs=63.8
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc-----c--c-c---H----------HH--
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-----M--F-D---K----------RI-- 280 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~-----~--~-~---~----------~~-- 280 (485)
.+|+|||||++|+.+|..|++. |.+|+|+++.+.... . + + . ++
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~~--------------G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~ 92 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQN--------------GIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYD 92 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--------------TCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHC--------------CCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHH
Confidence 3899999999999999999986 689999998754211 0 0 0 0 00
Q ss_pred ----------------------------------HHHHHHHHHhC--CcEEEcCceEEEEeC--CcEEEEEcCCCeEEEE
Q 011476 281 ----------------------------------TAFAEEKFSRD--GIDVKLGSMVVKVTD--KEIFTKVRGNGETSSM 322 (485)
Q Consensus 281 ----------------------------------~~~~~~~l~~~--gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i 322 (485)
...+.+.|.+. +++++++++|++++. +++.+.. .+|++ +
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~-~~g~~--~ 169 (398)
T 2xdo_A 93 LALPMGVNIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTF-ENKPS--E 169 (398)
T ss_dssp HCBCCCEEEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEE-TTSCC--E
T ss_pred hhcccceEEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEE-CCCcE--E
Confidence 01122222221 367889999999864 3466554 56764 8
Q ss_pred ecCeEEEccCC
Q 011476 323 PYGMVVWSTGI 333 (485)
Q Consensus 323 ~~D~vi~a~G~ 333 (485)
.+|.||.|.|.
T Consensus 170 ~ad~vV~AdG~ 180 (398)
T 2xdo_A 170 TADLVILANGG 180 (398)
T ss_dssp EESEEEECSCT
T ss_pred ecCEEEECCCc
Confidence 99999999995
No 325
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.43 E-value=7.3e-05 Score=75.65 Aligned_cols=92 Identities=20% Similarity=0.178 Sum_probs=65.6
Q ss_pred ccEEEECCChhHHHHHHHHHH-hhHHHHHhhCcCCCCCceEEEEecCccccc--------c--ccHHHHHHHHHHHHhCC
Q 011476 224 LHFVIVGGGPTGVEFAAELHD-FVDEDLFKLYPKVKDSVKITLLEAADHILN--------M--FDKRITAFAEEKFSRDG 292 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~-~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~--------~--~~~~~~~~~~~~l~~~g 292 (485)
++|+|||||+.|+.+|..|.+ ... ....+.+|+|+++.+.+.. . ...++...+.+.+++.|
T Consensus 4 ~~VvIIG~G~aGl~aA~~L~~~~~~--------~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~ 75 (456)
T 1lqt_A 4 YYIAIVGSGPSAFFAAASLLKAADT--------TEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPR 75 (456)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH--------STTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhhCcc--------ccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCC
Confidence 489999999999999999988 521 0001589999999876532 1 22356677778888899
Q ss_pred cEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 293 V~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
|+++.+..+ +..+.+ .+++ +.+|.||+|+|.
T Consensus 76 v~~~~~v~v----~~~v~~---~~~~---~~~d~lViAtG~ 106 (456)
T 1lqt_A 76 FRFFGNVVV----GEHVQP---GELS---ERYDAVIYAVGA 106 (456)
T ss_dssp EEEEESCCB----TTTBCH---HHHH---HHSSEEEECCCC
T ss_pred CEEEeeEEE----CCEEEE---CCCe---EeCCEEEEeeCC
Confidence 999988653 222222 2332 789999999995
No 326
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.42 E-value=8.1e-05 Score=80.70 Aligned_cols=41 Identities=24% Similarity=0.413 Sum_probs=38.1
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccC
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT 96 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~ 96 (485)
...++|+|||+|++||+||++|++.|++|+|+|+.+.+|+.
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 316 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCc
Confidence 45689999999999999999999999999999999988875
No 327
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.42 E-value=7e-05 Score=76.48 Aligned_cols=42 Identities=14% Similarity=0.102 Sum_probs=37.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCC-CcEEEEcCCCCcccCCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPS-YDVQVISPRNYFAFTPL 98 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g-~~V~lie~~~~~~~~~~ 98 (485)
..++|+|||||++|+++|++|++.| .+|+|+|+++.+|+...
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~ 50 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSR 50 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGC
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeee
Confidence 4579999999999999999999888 79999999998887543
No 328
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.41 E-value=5.4e-05 Score=74.75 Aligned_cols=35 Identities=23% Similarity=0.472 Sum_probs=32.1
Q ss_pred CeEEEECCcHHHHHHHHhcCCC--CCcEEEEcCCCCc
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYF 93 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~--g~~V~lie~~~~~ 93 (485)
++|+|||||++|+++|..|++. |++|+|+|+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999987 9999999998765
No 329
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.41 E-value=0.00029 Score=75.68 Aligned_cols=109 Identities=17% Similarity=0.264 Sum_probs=71.3
Q ss_pred CCCeEEEEC--CcHHHHHHHHhcCCCCCcEEEEcCCCCcccCCCccccccCcccccccccchHHHHhhCCCeEEEEEeEE
Q 011476 57 KKKKVVVLG--TGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (485)
Q Consensus 57 ~~~~vvIIG--~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~v 134 (485)
..++|+||| ||+.|+.+|..|++.|.+|+|+++.+ +... .. ... . ...+.+.+++.||++ +....+
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~-----~~---~~~-~-~~~~~~~l~~~GV~i-~~~~~v 594 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANY-----MH---FTL-E-YPNMMRRLHELHVEE-LGDHFC 594 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHH-----HH---HTT-C-HHHHHHHHHHTTCEE-ECSEEE
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccc-----cc---ccc-c-HHHHHHHHHhCCCEE-EcCcEE
Confidence 357999999 99999999999999999999999876 2210 00 000 1 234566778889887 356788
Q ss_pred EEEecCCCEEEEe--cCCcc---------CCCCCceEEeecCEEEEccCCCCCC
Q 011476 135 FKIDAENKKVYCR--SSQNT---------NLNGKEEFCMDYDYLVIAMGARANT 177 (485)
Q Consensus 135 ~~id~~~~~v~~~--~~~~~---------~~~~~~~~~~~yd~lviAtG~~~~~ 177 (485)
..++.+...+... ++... ...+++++.+.+|.||+|+|..|+.
T Consensus 595 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~ 648 (729)
T 1o94_A 595 SRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSEC 648 (729)
T ss_dssp EEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECC
T ss_pred EEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCCh
Confidence 8887643222221 11000 0011223459999999999998764
No 330
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.38 E-value=0.001 Score=69.01 Aligned_cols=65 Identities=14% Similarity=0.010 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhCCcEEEcCceEEEEeC--CcE---EEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCC
Q 011476 280 ITAFAEEKFSRDGIDVKLGSMVVKVTD--KEI---FTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ 348 (485)
Q Consensus 280 ~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v---~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~ 348 (485)
+...+.+.+++.|++++++++|+++.. +++ .+....+|+..++.+|.||.|+| ++...+.+.+|.
T Consensus 172 l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG----~~s~~l~~~~g~ 241 (561)
T 3da1_A 172 LTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAG----PWVDTLREKDRS 241 (561)
T ss_dssp HHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCG----GGHHHHHHTTTC
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCC----cchHHHHHhcCC
Confidence 344455667788999999999999863 443 33332356556699999999999 444455555543
No 331
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.33 E-value=0.00011 Score=73.84 Aligned_cols=41 Identities=20% Similarity=0.265 Sum_probs=37.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~~ 97 (485)
..++|+|||+|++|+++|..|++.|++|+|+|+++.+|+..
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~ 45 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGES 45 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccc
Confidence 35799999999999999999999999999999999988864
No 332
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.30 E-value=0.0011 Score=65.72 Aligned_cols=61 Identities=13% Similarity=0.229 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhCCcEEEcCceEE---------EEeC--CcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHH-HhC
Q 011476 280 ITAFAEEKFSRDGIDVKLGSMVV---------KVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMK-QVG 347 (485)
Q Consensus 280 ~~~~~~~~l~~~gV~v~~~~~v~---------~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~-~~g 347 (485)
+...+.+.+++.|++++++++|+ ++.. +.+. +...+| ++.+|.||.|+|. ....|.+ .++
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~-v~~~~g---~i~a~~VV~A~G~----~s~~l~~~~~g 245 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQI-VVHETR---QIRAGVIIVAAGA----AGPALVEQGLG 245 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC--------CBCCE---EEEEEEEEECCGG----GHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEE-EEECCc---EEECCEEEECCCc----cHHHHHHHhcC
Confidence 45566777788899999999999 8753 3342 332344 3899999999993 3334555 555
Q ss_pred C
Q 011476 348 Q 348 (485)
Q Consensus 348 ~ 348 (485)
+
T Consensus 246 ~ 246 (405)
T 3c4n_A 246 L 246 (405)
T ss_dssp C
T ss_pred C
Confidence 4
No 333
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.29 E-value=0.00011 Score=71.39 Aligned_cols=33 Identities=27% Similarity=0.350 Sum_probs=31.6
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
++|+|||||+||+.||..|++.|++|+|+|+++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 689999999999999999999999999999876
No 334
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.28 E-value=0.00084 Score=70.93 Aligned_cols=55 Identities=15% Similarity=0.191 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhCCc--EEEcCceEEEEeCC------cEEEEEc-----CCCeEEEEecCeEEEccCC
Q 011476 279 RITAFAEEKFSRDGI--DVKLGSMVVKVTDK------EIFTKVR-----GNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 279 ~~~~~~~~~l~~~gV--~v~~~~~v~~v~~~------~v~~~~~-----~~G~~~~i~~D~vi~a~G~ 333 (485)
.+...+.+.+++.|+ ++++++++++++.+ .+.+... .+|+..++.+|.||.|.|.
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~ 209 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGA 209 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCc
Confidence 456677788888877 99999999998632 3555432 2565556999999999994
No 335
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.27 E-value=0.00012 Score=73.88 Aligned_cols=54 Identities=15% Similarity=0.073 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEeC---CcEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 278 KRITAFAEEKFSRDGIDVKLGSMVVKVTD---KEIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 278 ~~~~~~~~~~l~~~gV~v~~~~~v~~v~~---~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
.++.+.+.+.+++.|+++++++.|++|.. +++..+.+.+|+. +.||.||.+.|.
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~--i~Ad~VI~a~~~ 312 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEI--AYCDKVICDPSY 312 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCE--EEEEEEEECGGG
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcE--EECCEEEECCCc
Confidence 46788888999999999999999999853 4566666567775 899999999985
No 336
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.25 E-value=0.00011 Score=78.89 Aligned_cols=41 Identities=24% Similarity=0.396 Sum_probs=37.2
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccC
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT 96 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~ 96 (485)
...++|+|||||++|+++|..|++.|++|+|+|+.+..++.
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggr 374 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGR 374 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceece
Confidence 44689999999999999999999999999999999888773
No 337
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.24 E-value=8.5e-05 Score=72.33 Aligned_cols=34 Identities=29% Similarity=0.385 Sum_probs=31.2
Q ss_pred CeEEEECCcHHHHHHHHhcCCCC------CcEEEEcCCCC
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNPS------YDVQVISPRNY 92 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~g------~~V~lie~~~~ 92 (485)
+||+|||||++|+++|++|++.| ++|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 48999999999999999999887 99999998864
No 338
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.24 E-value=0.00041 Score=68.35 Aligned_cols=85 Identities=21% Similarity=0.431 Sum_probs=63.3
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccc----------------------c-c-------
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI----------------------L-N------- 274 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~----------------------l-~------- 274 (485)
+|+|||||+.|+.+|..|++.. +|.+|+|+++.+.+ . .
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~------------~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQAR------------PLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNP 69 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCC
T ss_pred eEEEECCCHHHHHHHHHHHhcC------------CCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhh
Confidence 7999999999999999999861 25778888765432 0 0
Q ss_pred -------------------------cccHHHHHHHHHHHHhCCcEEEcCceEEEEeCCcEEEEEcCCCeEEEEecCeEEE
Q 011476 275 -------------------------MFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVW 329 (485)
Q Consensus 275 -------------------------~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~~~v~~~~~~~G~~~~i~~D~vi~ 329 (485)
.....+.+.+.+.+++.||+++++++|++++.. + ++.+|.||.
T Consensus 70 ~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~----------~--~~~ad~vV~ 137 (381)
T 3c4a_A 70 QFLEDFKLVHHNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL----------P--LADYDLVVL 137 (381)
T ss_dssp EEECCEEEEESSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC----------C--GGGCSEEEE
T ss_pred ccccceEEEeCCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc----------c--cccCCEEEE
Confidence 011456677778888889999999999888642 1 167899999
Q ss_pred ccCC
Q 011476 330 STGI 333 (485)
Q Consensus 330 a~G~ 333 (485)
|.|.
T Consensus 138 AdG~ 141 (381)
T 3c4a_A 138 ANGV 141 (381)
T ss_dssp CCGG
T ss_pred CCCC
Confidence 9985
No 339
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.20 E-value=0.00016 Score=73.44 Aligned_cols=41 Identities=22% Similarity=0.357 Sum_probs=36.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCC-cEEEEcCCCCcccCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRNYFAFTP 97 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~-~V~lie~~~~~~~~~ 97 (485)
..++|+|||||++|+++|+.|.+.|+ +|+|+|+++.+++..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~ 44 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRM 44 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCce
Confidence 35799999999999999999999998 899999999888854
No 340
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.17 E-value=0.0044 Score=59.21 Aligned_cols=69 Identities=14% Similarity=0.165 Sum_probs=51.0
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccccc-----------------------------
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM----------------------------- 275 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~----------------------------- 275 (485)
+|+|||||+.|+.+|..|++.. ++.+|+|+++.+.....
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~------------~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~ 134 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNR------------PDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYE 134 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHC------------TTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCE
T ss_pred CEEEECccHHHHHHHHHHHhcC------------CCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccc
Confidence 8999999999999999999851 25799999886543100
Q ss_pred ---------ccHHHHHHHHHHHHh-CCcEEEcCceEEEEe
Q 011476 276 ---------FDKRITAFAEEKFSR-DGIDVKLGSMVVKVT 305 (485)
Q Consensus 276 ---------~~~~~~~~~~~~l~~-~gV~v~~~~~v~~v~ 305 (485)
...++...+.+.+.+ .||+++.++.++++.
T Consensus 135 ~~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll 174 (326)
T 2gjc_A 135 DEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLV 174 (326)
T ss_dssp ECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEE
T ss_pred cCCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeee
Confidence 112334555666666 499999999999984
No 341
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.12 E-value=0.0034 Score=64.85 Aligned_cols=49 Identities=18% Similarity=0.268 Sum_probs=35.8
Q ss_pred HHHHHHHHhCCcEEEcCceEEEEeC--Cc-EEEEEcCCCeEEEEecCeEEEccCC
Q 011476 282 AFAEEKFSRDGIDVKLGSMVVKVTD--KE-IFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 282 ~~~~~~l~~~gV~v~~~~~v~~v~~--~~-v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
..+.+.+++.||+++.+ +|+++.. ++ +..+...+|+. +.+|.||.|+|.
T Consensus 169 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~--i~ad~vV~A~G~ 220 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRT--LEADLFIDCSGM 220 (538)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCE--ECCSEEEECCGG
T ss_pred HHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcE--EEeCEEEECCCC
Confidence 45556667789999999 8999863 22 33333456754 999999999995
No 342
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.12 E-value=0.0047 Score=59.40 Aligned_cols=137 Identities=16% Similarity=0.108 Sum_probs=84.0
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc-----------------------------
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN----------------------------- 274 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~----------------------------- 274 (485)
-.|+|||||+.|+.+|..|++.. +|.+|+|+++.+.+..
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~------------~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~ 147 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLR------------PDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPY 147 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHC------------TTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCC
T ss_pred CCEEEECccHHHHHHHHHHHhcC------------CCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcc
Confidence 37999999999999999999851 2679999988753210
Q ss_pred ---------cccHHHHHHHHHHHHh-CCcEEEcCceEEEEe--C-----------------C--cEEEEEc------CCC
Q 011476 275 ---------MFDKRITAFAEEKFSR-DGIDVKLGSMVVKVT--D-----------------K--EIFTKVR------GNG 317 (485)
Q Consensus 275 ---------~~~~~~~~~~~~~l~~-~gV~v~~~~~v~~v~--~-----------------~--~v~~~~~------~~G 317 (485)
....++...+.+.+.+ .||+++.++.++++. + + .+..+.. .+|
T Consensus 148 ~~~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g 227 (344)
T 3jsk_A 148 EDEGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHH 227 (344)
T ss_dssp EECSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTS
T ss_pred cccCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccC
Confidence 0013334556666666 599999999998874 2 1 2222211 122
Q ss_pred ------eEEEEecCeEEEccCCCCCcchHHH---HHHhCCC--CCCceeeC----------CCccccCCCCeEEecccc
Q 011476 318 ------ETSSMPYGMVVWSTGIAPHAIIKDF---MKQVGQT--NRRALATD----------EWLRVEGSDSIYALGDCA 375 (485)
Q Consensus 318 ------~~~~i~~D~vi~a~G~~~~p~~~~l---~~~~g~~--~~g~i~vd----------~~l~t~~~~~Vya~GD~~ 375 (485)
...++.++.||.|+|. ..+....+ +..+++. ..|.-..+ .+-+. +|++|++|=.+
T Consensus 228 ~~~~~~d~~~i~Ak~VV~ATG~-~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v--~~gl~~~gm~~ 303 (344)
T 3jsk_A 228 DDQSAMDPNTINAPVIISTTGH-DGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREI--VPGLIVGGMEL 303 (344)
T ss_dssp SSSSCCBCEEEECSEEEECCCS-SSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEE--ETTEEECGGGH
T ss_pred CcccccCceEEEcCEEEECCCC-CchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceE--cCCEEEechhh
Confidence 2346999999999995 23322223 3345552 12211111 22222 69999999654
No 343
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.11 E-value=0.0028 Score=65.60 Aligned_cols=51 Identities=12% Similarity=0.194 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhCCcEEEcCceEEEEeC--CcEEEEEc--CCCeEEEEecCeEEEccCC
Q 011476 280 ITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVR--GNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 280 ~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~v~~~~~--~~G~~~~i~~D~vi~a~G~ 333 (485)
+.+.+.+.+++. +++++++++++. +++++... .+|+..++.+|.||.|.|.
T Consensus 140 l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~ 194 (549)
T 2r0c_A 140 LAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGA 194 (549)
T ss_dssp HHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCC
Confidence 445555666655 889999999863 44554432 2365456999999999994
No 344
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.06 E-value=0.0038 Score=65.30 Aligned_cols=51 Identities=16% Similarity=0.050 Sum_probs=37.2
Q ss_pred HHHHHHHHhCC-cEEEcCceEEEEe--CCcE---EEEEcCCCeEEEEecCeEEEccC
Q 011476 282 AFAEEKFSRDG-IDVKLGSMVVKVT--DKEI---FTKVRGNGETSSMPYGMVVWSTG 332 (485)
Q Consensus 282 ~~~~~~l~~~g-V~v~~~~~v~~v~--~~~v---~~~~~~~G~~~~i~~D~vi~a~G 332 (485)
..+.+.+++.| |+++.++.++++. ++.+ ......+|+...+.++.||+|+|
T Consensus 138 ~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 194 (602)
T 1kf6_A 138 HTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATG 194 (602)
T ss_dssp HHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCC
T ss_pred HHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCC
Confidence 34445556678 9999999999985 3433 33334578766699999999999
No 345
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.02 E-value=0.0035 Score=63.24 Aligned_cols=33 Identities=24% Similarity=0.541 Sum_probs=31.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
.++|+|+|+|-.|.+.|..|...|++|+|||++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESC
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 468999999999999999999999999999977
No 346
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.96 E-value=0.0034 Score=64.16 Aligned_cols=115 Identities=23% Similarity=0.243 Sum_probs=73.0
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccc-------ccc----------------------
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI-------LNM---------------------- 275 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~-------l~~---------------------- 275 (485)
.|+|||+|+.|+-+|..|.+.+...+.........+....++++.+.+ ++.
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~s 120 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFT 120 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTTS
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCccc
Confidence 699999999999999999876532211111111223445566654421 000
Q ss_pred ----------------------ccHHHHHHHHHHHHhCCcEEEcCceEEEEeC---C---------cEEEEEcCCCeEEE
Q 011476 276 ----------------------FDKRITAFAEEKFSRDGIDVKLGSMVVKVTD---K---------EIFTKVRGNGETSS 321 (485)
Q Consensus 276 ----------------------~~~~~~~~~~~~l~~~gV~v~~~~~v~~v~~---~---------~v~~~~~~~G~~~~ 321 (485)
.-.++.++++...++.+..+.++++|++++. + .|+.....+|+..+
T Consensus 121 f~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~ 200 (501)
T 4b63_A 121 FLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISA 200 (501)
T ss_dssp HHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEE
T ss_pred hHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEE
Confidence 0135666777777777888999999999952 1 13344445566677
Q ss_pred EecCeEEEccCCCCCcchHH
Q 011476 322 MPYGMVVWSTGIAPHAIIKD 341 (485)
Q Consensus 322 i~~D~vi~a~G~~~~p~~~~ 341 (485)
+.|+.||+|+| ..|.+..
T Consensus 201 ~~ar~vVlatG--~~P~iP~ 218 (501)
T 4b63_A 201 RRTRKVVIAIG--GTAKMPS 218 (501)
T ss_dssp EEEEEEEECCC--CEECCCT
T ss_pred EEeCEEEECcC--CCCCCCC
Confidence 89999999999 5776643
No 347
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.94 E-value=0.006 Score=63.40 Aligned_cols=61 Identities=13% Similarity=0.040 Sum_probs=40.6
Q ss_pred HHHHHHHHhCCcEEEcCceEEEEe--CCcEEEE---EcCCCeEEEEecCeEEEccCCCCCcchHHHHHHh
Q 011476 282 AFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTK---VRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV 346 (485)
Q Consensus 282 ~~~~~~l~~~gV~v~~~~~v~~v~--~~~v~~~---~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~ 346 (485)
..+.+.+++.|++++.+++|+++. ++.+..+ ...+|+..++.+|.||.|+| ++...+.+..
T Consensus 192 ~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG----~ws~~l~~~~ 257 (571)
T 2rgh_A 192 IDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSG----PWVDKVRNLN 257 (571)
T ss_dssp HHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCG----GGHHHHHTTC
T ss_pred HHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCC----hhHHHHHHhh
Confidence 334556678899999999999985 3343322 22245544599999999999 4444554433
No 348
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=96.92 E-value=0.0059 Score=61.88 Aligned_cols=50 Identities=20% Similarity=0.205 Sum_probs=33.6
Q ss_pred HHHHHHHHHhCCcEEEcCceEEEEe--CCcEEEEEcC-CCeEEEEecCeEEEccCC
Q 011476 281 TAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRG-NGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 281 ~~~~~~~l~~~gV~v~~~~~v~~v~--~~~v~~~~~~-~G~~~~i~~D~vi~a~G~ 333 (485)
...+.+.+++.||+++.++.+ ++. ++.+..+... ++. ++.+|.||+|+|.
T Consensus 122 ~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g--~~~a~~VVlAtGg 174 (472)
T 2e5v_A 122 FNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGL--VEDVDKLVLATGG 174 (472)
T ss_dssp HHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEE--ECCCSEEEECCCC
T ss_pred HHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCC--eEEeeeEEECCCC
Confidence 445556667789999999999 884 3444332211 222 2779999999994
No 349
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.88 E-value=0.00029 Score=74.49 Aligned_cols=36 Identities=25% Similarity=0.432 Sum_probs=33.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCC--------CcEEEEcCCC-Cc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPS--------YDVQVISPRN-YF 93 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g--------~~V~lie~~~-~~ 93 (485)
+++|+|||||++||+||+.|.+.| ++|+|+|+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 579999999999999999999877 9999999998 88
No 350
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.85 E-value=0.00055 Score=72.32 Aligned_cols=36 Identities=11% Similarity=0.316 Sum_probs=32.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcC---C-CCCcEEEEcCCCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLN---N-PSYDVQVISPRNY 92 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~---~-~g~~V~lie~~~~ 92 (485)
..+||||||||+||++||+.|+ + .|.+|+|+|+.+.
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 3479999999999999999999 6 8999999998863
No 351
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.70 E-value=0.013 Score=60.65 Aligned_cols=51 Identities=16% Similarity=0.186 Sum_probs=37.5
Q ss_pred HHHHHHHHHHhC-CcEEEcCceEEEEeC--Cc-EEEEEcCCCeEEEEecCeEEEccCC
Q 011476 280 ITAFAEEKFSRD-GIDVKLGSMVVKVTD--KE-IFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 280 ~~~~~~~~l~~~-gV~v~~~~~v~~v~~--~~-v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
+...+.+.+++. ||+++++ +|+++.. ++ +..+...+|+. +.+|.||.|+|.
T Consensus 196 l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~--i~ad~vI~A~G~ 250 (550)
T 2e4g_A 196 VADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRV--FDADLFVDCSGF 250 (550)
T ss_dssp HHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCE--EECSEEEECCGG
T ss_pred HHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCE--EECCEEEECCCC
Confidence 455666777777 9999999 9999863 33 33333456754 899999999995
No 352
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.59 E-value=0.00092 Score=69.27 Aligned_cols=36 Identities=14% Similarity=0.210 Sum_probs=33.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~ 92 (485)
..+|++|||+|++|+.+|.+|++.|++|+|+|+.+.
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 458999999999999999999999999999998864
No 353
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.57 E-value=0.013 Score=60.20 Aligned_cols=50 Identities=12% Similarity=0.150 Sum_probs=35.5
Q ss_pred HHHHHHHHHh-CCcEEEcCceEEEEeC--Cc-EEEEEcCCCeEEEEecCeEEEccCC
Q 011476 281 TAFAEEKFSR-DGIDVKLGSMVVKVTD--KE-IFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 281 ~~~~~~~l~~-~gV~v~~~~~v~~v~~--~~-v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
...+.+.+++ .||+++.+ +|+++.. ++ +..+...+|.+ +.+|.||.|+|.
T Consensus 178 ~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~--i~ad~vV~AdG~ 231 (526)
T 2pyx_A 178 SQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGE--ISGQLFIDCTGA 231 (526)
T ss_dssp HHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCE--EECSEEEECSGG
T ss_pred HHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCE--EEcCEEEECCCc
Confidence 4455566677 89999999 5999863 23 33333356654 999999999995
No 354
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.54 E-value=0.0084 Score=53.84 Aligned_cols=107 Identities=15% Similarity=0.165 Sum_probs=64.6
Q ss_pred hcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceE
Q 011476 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMV 301 (485)
Q Consensus 222 ~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v 301 (485)
.+++|+|||||.+|...+..|.+. |.+|+++.+.. .++ +.+..++.+|+++...-
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~--------------GA~VtVvap~~------~~~----l~~l~~~~~i~~i~~~~- 84 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE--------------GAAITVVAPTV------SAE----INEWEAKGQLRVKRKKV- 84 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG--------------CCCEEEECSSC------CHH----HHHHHHTTSCEEECSCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--------------CCEEEEECCCC------CHH----HHHHHHcCCcEEEECCC-
Confidence 567999999999999999999986 68999997532 223 33444555677653321
Q ss_pred EEEeCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHhCCCCCCceeeC---C-CccccCCCCeEEeccc
Q 011476 302 VKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATD---E-WLRVEGSDSIYALGDC 374 (485)
Q Consensus 302 ~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~g~~~~g~i~vd---~-~l~t~~~~~Vya~GD~ 374 (485)
..+.. -.+|+||.||| .+.+...+... .. .+|.|| . .+-+...|.++--||.
T Consensus 85 -------------~~~dL--~~adLVIaAT~---d~~~N~~I~~~--ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l 140 (223)
T 3dfz_A 85 -------------GEEDL--LNVFFIVVATN---DQAVNKFVKQH--IK-NDQLVNMASSFSDGNIQIPAQFSRGRL 140 (223)
T ss_dssp -------------CGGGS--SSCSEEEECCC---CTHHHHHHHHH--SC-TTCEEEC-----CCSEECCEEEEETTE
T ss_pred -------------CHhHh--CCCCEEEECCC---CHHHHHHHHHH--Hh-CCCEEEEeCCcccCeEEEeeEEEeCCE
Confidence 01111 24899999999 34332333222 12 345544 1 1222245777777774
No 355
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.52 E-value=0.0014 Score=67.37 Aligned_cols=36 Identities=25% Similarity=0.410 Sum_probs=32.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCC-CCCcEEEEcCCCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNN-PSYDVQVISPRNY 92 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~-~g~~V~lie~~~~ 92 (485)
..+|+||||||+||..+|..|++ .+++|+|+|+.+.
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 36899999999999999999996 7899999998754
No 356
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.51 E-value=0.015 Score=61.58 Aligned_cols=20 Identities=40% Similarity=0.702 Sum_probs=19.4
Q ss_pred cEEEECCChhHHHHHHHHHH
Q 011476 225 HFVIVGGGPTGVEFAAELHD 244 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~ 244 (485)
.|+|||||++|+-+|..|++
T Consensus 10 dVlIVGaGpaGL~lA~~La~ 29 (665)
T 1pn0_A 10 DVLIVGAGPAGLMAARVLSE 29 (665)
T ss_dssp EEEEECCSHHHHHHHHHHHH
T ss_pred cEEEECcCHHHHHHHHHHhc
Confidence 79999999999999999999
No 357
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.38 E-value=0.016 Score=59.24 Aligned_cols=52 Identities=15% Similarity=0.131 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEeC--Cc-EEEEEcCCCeEEEEecCeEEEccCC
Q 011476 279 RITAFAEEKFSRDGIDVKLGSMVVKVTD--KE-IFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 279 ~~~~~~~~~l~~~gV~v~~~~~v~~v~~--~~-v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
.+...+.+.+++.||+++.+ +|+++.. ++ +..+...+|+. +.+|.||.|+|.
T Consensus 174 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~--~~ad~vV~A~G~ 228 (511)
T 2weu_A 174 EVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGE--ISGDLFVDCTGF 228 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCE--EECSEEEECCGG
T ss_pred HHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCE--EEcCEEEECCCc
Confidence 34556667777889999999 8999863 33 33333356754 999999999995
No 358
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.36 E-value=0.028 Score=58.83 Aligned_cols=50 Identities=12% Similarity=0.031 Sum_probs=35.4
Q ss_pred HHHHHHhCCcEEEcCceEEEEe--CCcE---EEEEcCCCeEEEEecCeEEEccCC
Q 011476 284 AEEKFSRDGIDVKLGSMVVKVT--DKEI---FTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 284 ~~~~l~~~gV~v~~~~~v~~v~--~~~v---~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
+.+.+.+.||+|+.++.++++. ++.+ .+....+|+...+.++.||+|+|-
T Consensus 161 L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 215 (621)
T 2h88_A 161 LYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGG 215 (621)
T ss_dssp HHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCc
Confidence 3444456789999999999884 3433 333335677667999999999983
No 359
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.32 E-value=0.002 Score=66.50 Aligned_cols=36 Identities=22% Similarity=0.365 Sum_probs=32.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~ 93 (485)
..+|+||||||+||+.+|..|++ |.+|+|+|+.+..
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 35899999999999999999999 9999999998654
No 360
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.29 E-value=0.0029 Score=65.68 Aligned_cols=36 Identities=19% Similarity=0.258 Sum_probs=32.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCC-CcEEEEcCCCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPS-YDVQVISPRNY 92 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g-~~V~lie~~~~ 92 (485)
..+|+||||||.||+.+|..|++.+ .+|+|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4589999999999999999999877 79999998865
No 361
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.23 E-value=0.034 Score=58.60 Aligned_cols=51 Identities=10% Similarity=0.077 Sum_probs=36.3
Q ss_pred HHHHHHHhCCcEEEcCceEEEEe--CCc---EEEEEcCCCeEEEEecCeEEEccCC
Q 011476 283 FAEEKFSRDGIDVKLGSMVVKVT--DKE---IFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 283 ~~~~~l~~~gV~v~~~~~v~~v~--~~~---v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
.+.+.+.+.||+|+.++.++++. ++. +......+|+...+.++.||+|+|-
T Consensus 163 ~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 163 AVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCC
T ss_pred HHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCc
Confidence 33445556789999999999984 343 3333335677667999999999983
No 362
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.11 E-value=0.0043 Score=56.95 Aligned_cols=34 Identities=21% Similarity=0.348 Sum_probs=31.1
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccc
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~ 272 (485)
.|+|||||++|+-+|..|++. |.+|+|+++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~--------------G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAA--------------GHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEECCCCC
Confidence 699999999999999999996 7999999988754
No 363
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.02 E-value=0.0043 Score=64.39 Aligned_cols=35 Identities=23% Similarity=0.422 Sum_probs=32.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCC-CCCcEEEEcCCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNN-PSYDVQVISPRN 91 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~-~g~~V~lie~~~ 91 (485)
..+|+||||||.||+.+|..|++ .+.+|+|+|+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 46899999999999999999995 689999999886
No 364
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=96.00 E-value=0.016 Score=59.72 Aligned_cols=46 Identities=20% Similarity=0.107 Sum_probs=33.3
Q ss_pred HHHh-CCcEEEcCceEEEEeC---C------cEE---EEEcCCCeEEEEecCeEEEccC
Q 011476 287 KFSR-DGIDVKLGSMVVKVTD---K------EIF---TKVRGNGETSSMPYGMVVWSTG 332 (485)
Q Consensus 287 ~l~~-~gV~v~~~~~v~~v~~---~------~v~---~~~~~~G~~~~i~~D~vi~a~G 332 (485)
.+++ .||++++++.++++.. + .+. +....+|+..++.++.||+|+|
T Consensus 147 ~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 205 (540)
T 1chu_A 147 KALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATG 205 (540)
T ss_dssp HHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCC
T ss_pred HHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCC
Confidence 3445 6999999999999852 3 443 2222367766799999999999
No 365
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.90 E-value=0.0035 Score=64.18 Aligned_cols=37 Identities=16% Similarity=0.266 Sum_probs=33.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA 94 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~ 94 (485)
.++++|||+|++|+.+|..|++.|.+|+|+|+.....
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 5799999999999999999999999999999887544
No 366
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.85 E-value=0.0064 Score=50.39 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=32.8
Q ss_pred CCCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 55 GIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 55 ~~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
...+.+|+|+|.|..|...|..|...|++|+++|++
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 345679999999999999999999999999999976
No 367
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.84 E-value=0.0049 Score=63.07 Aligned_cols=38 Identities=16% Similarity=0.325 Sum_probs=34.1
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCc
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~ 93 (485)
...++++|||+|++|+.+|..|++.|.+|+|+|+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 34689999999999999999999999999999988643
No 368
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=95.75 E-value=0.0041 Score=64.42 Aligned_cols=36 Identities=28% Similarity=0.321 Sum_probs=32.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCC-CCCcEEEEcCCCCc
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNN-PSYDVQVISPRNYF 93 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~-~g~~V~lie~~~~~ 93 (485)
.+|+||||||.||+.+|..|++ .+.+|+|+|+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 3799999999999999999997 89999999988654
No 369
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=95.66 E-value=0.082 Score=56.75 Aligned_cols=39 Identities=21% Similarity=0.282 Sum_probs=31.5
Q ss_pred CCcEEEcCceEEEEeC--CcEEEEEcCCCeEEEEecCeEEEccC
Q 011476 291 DGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTG 332 (485)
Q Consensus 291 ~gV~v~~~~~v~~v~~--~~v~~~~~~~G~~~~i~~D~vi~a~G 332 (485)
.|++|++++.|++|+. +++.+.. .+|+. +.+|.||+|+.
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~-~~G~~--i~Ad~VIvA~P 582 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTT-TDGTG--YSAQKVLVTVP 582 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEE-TTCCE--EEESEEEECCC
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEE-CCCcE--EEcCEEEECCC
Confidence 4789999999999974 4577665 56765 89999999997
No 370
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=95.58 E-value=0.0078 Score=62.17 Aligned_cols=37 Identities=19% Similarity=0.286 Sum_probs=33.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCC-CCcEEEEcCCCCc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNP-SYDVQVISPRNYF 93 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~-g~~V~lie~~~~~ 93 (485)
..++++|||+|++|+.+|..|++. +.+|+|+|+.+..
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 468999999999999999999986 8999999988643
No 371
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.53 E-value=0.0071 Score=63.04 Aligned_cols=37 Identities=27% Similarity=0.408 Sum_probs=33.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCC-CCCcEEEEcCCCCc
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNN-PSYDVQVISPRNYF 93 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~-~g~~V~lie~~~~~ 93 (485)
..++++|||+|++|+.+|..|++ .|.+|+|+|+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 45899999999999999999998 89999999988644
No 372
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.36 E-value=0.027 Score=56.63 Aligned_cols=74 Identities=16% Similarity=0.204 Sum_probs=54.1
Q ss_pred hcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceE
Q 011476 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMV 301 (485)
Q Consensus 222 ~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v 301 (485)
++++|.|||.|.+|+-+|..|.+. |.+|++.+..+... + ...+.|++.||+++.+...
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~--------------G~~V~~~D~~~~~~---~-----~~~~~L~~~gi~~~~g~~~ 65 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKL--------------GAIVTVNDGKPFDE---N-----PTAQSLLEEGIKVVCGSHP 65 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHT--------------TCEEEEEESSCGGG---C-----HHHHHHHHTTCEEEESCCC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC--------------CCEEEEEeCCcccC---C-----hHHHHHHhCCCEEEECCCh
Confidence 467999999999999999999886 79999999875311 1 1235678889999876541
Q ss_pred EEEeCCcEEEEEcCCCeEEEEe-cCeEEEccCC
Q 011476 302 VKVTDKEIFTKVRGNGETSSMP-YGMVVWSTGI 333 (485)
Q Consensus 302 ~~v~~~~v~~~~~~~G~~~~i~-~D~vi~a~G~ 333 (485)
.++ . -. +|.||++.|+
T Consensus 66 ~~~----------~------~~~~d~vv~spgi 82 (451)
T 3lk7_A 66 LEL----------L------DEDFCYMIKNPGI 82 (451)
T ss_dssp GGG----------G------GSCEEEEEECTTS
T ss_pred HHh----------h------cCCCCEEEECCcC
Confidence 100 0 12 7899999996
No 373
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.35 E-value=0.0097 Score=50.22 Aligned_cols=36 Identities=22% Similarity=0.342 Sum_probs=32.3
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
....+|+|||+|..|..+|..|...|++|+++++++
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 345799999999999999999999999999999763
No 374
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=95.34 E-value=0.077 Score=55.87 Aligned_cols=48 Identities=10% Similarity=0.052 Sum_probs=34.1
Q ss_pred HHHHhC-Cc-EEEcCceEEEEe--CC---cEEE---EEcCCCeEEEEecCeEEEccCC
Q 011476 286 EKFSRD-GI-DVKLGSMVVKVT--DK---EIFT---KVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 286 ~~l~~~-gV-~v~~~~~v~~v~--~~---~v~~---~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
+.+++. || +++.++.++++. ++ .+.. ....+|+...+.++.||+|+|-
T Consensus 159 ~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG 216 (643)
T 1jnr_A 159 EAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGG 216 (643)
T ss_dssp HHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCc
Confidence 334455 89 999999999884 34 5433 2335676556899999999994
No 375
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.94 E-value=0.014 Score=59.33 Aligned_cols=36 Identities=25% Similarity=0.357 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL 273 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l 273 (485)
|+|+|||+|..|+-+|..|++. |.+|+|+++++++.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~--------------G~~V~VlEa~~~~G 37 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA--------------GIPVLLLEQRDKPG 37 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT--------------TCCEEEECCC----
T ss_pred CCEEEECCcHHHHHHHHHHHHC--------------CCcEEEEccCCCCC
Confidence 5899999999999999999986 78999999988763
No 376
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=94.76 E-value=0.017 Score=55.32 Aligned_cols=70 Identities=19% Similarity=0.173 Sum_probs=47.9
Q ss_pred cccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccccc-------cc-HHHHHHHHHHHHhCCcE
Q 011476 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-------FD-KRITAFAEEKFSRDGID 294 (485)
Q Consensus 223 ~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~-------~~-~~~~~~~~~~l~~~gV~ 294 (485)
...|+||||||.|+-+|..|++. +.|.+|+|+++.+.+... ++ ..+...+.+.+++.||+
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~------------r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~ 132 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKN------------RPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIP 132 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHH------------CTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHh------------CCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCE
Confidence 35899999999999999999753 137899999998754221 11 01112334567788998
Q ss_pred EEcCceEEEE
Q 011476 295 VKLGSMVVKV 304 (485)
Q Consensus 295 v~~~~~v~~v 304 (485)
+..+......
T Consensus 133 ~~~~~~~~~~ 142 (326)
T 3fpz_A 133 YEDEGDYVVV 142 (326)
T ss_dssp CEECSSEEEE
T ss_pred EEECCcceec
Confidence 8877655443
No 377
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=94.76 E-value=0.019 Score=59.87 Aligned_cols=41 Identities=20% Similarity=0.309 Sum_probs=38.2
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCCcccC
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT 96 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~~~~~ 96 (485)
.+.+||+|||+|..|..+|..|++.|.+|.+||+++++|+.
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~ 46 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGN 46 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCc
Confidence 34789999999999999999999999999999999999885
No 378
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.67 E-value=0.018 Score=47.55 Aligned_cols=33 Identities=18% Similarity=0.390 Sum_probs=30.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
+++++|+|+|..|.+.|..|...|++|+++|++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 468999999999999999999999999999975
No 379
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.64 E-value=0.019 Score=47.08 Aligned_cols=33 Identities=21% Similarity=0.393 Sum_probs=29.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
.++|+|||+|..|...|..|...|++|+++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 368999999999999999999899999999975
No 380
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=94.60 E-value=0.11 Score=54.75 Aligned_cols=50 Identities=14% Similarity=0.017 Sum_probs=34.4
Q ss_pred HHHHHHhC--CcEEEcCceEEEEe--CC---cEE---EEEcCCCeEEEEecCeEEEccCC
Q 011476 284 AEEKFSRD--GIDVKLGSMVVKVT--DK---EIF---TKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 284 ~~~~l~~~--gV~v~~~~~v~~v~--~~---~v~---~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
+.+.+++. ||+++.++.++++. ++ .+. .....+|+...+.++.||+|||-
T Consensus 172 L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 172 VAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGG 231 (662)
T ss_dssp HHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCc
Confidence 34445555 89999998888763 33 443 33335677667899999999993
No 381
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.48 E-value=0.026 Score=50.67 Aligned_cols=34 Identities=26% Similarity=0.435 Sum_probs=31.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
..++|+|||||..|...+..|...|.+|+|++++
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4689999999999999999999999999999975
No 382
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.46 E-value=0.02 Score=45.36 Aligned_cols=34 Identities=26% Similarity=0.387 Sum_probs=30.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCC-CcEEEEcCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPS-YDVQVISPR 90 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g-~~V~lie~~ 90 (485)
++++|+|+|+|..|..++..|...| ++|++++++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 3568999999999999999999889 999999975
No 383
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.42 E-value=0.082 Score=50.55 Aligned_cols=72 Identities=19% Similarity=0.156 Sum_probs=51.3
Q ss_pred cccEEEECCChhHHH-HHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceE
Q 011476 223 ILHFVIVGGGPTGVE-FAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMV 301 (485)
Q Consensus 223 ~~~vvVVGgG~~g~e-~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v 301 (485)
.+++.|||.|.+|+. +|..|.+. |.+|++.+..+.. . ..+.|++.||+++.+...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~--------------G~~V~~~D~~~~~------~----~~~~L~~~gi~v~~g~~~ 59 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEA--------------GFEVSGCDAKMYP------P----MSTQLEALGIDVYEGFDA 59 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHT--------------TCEEEEEESSCCT------T----HHHHHHHTTCEEEESCCG
T ss_pred CcEEEEEEECHHHHHHHHHHHHhC--------------CCEEEEEcCCCCc------H----HHHHHHhCCCEEECCCCH
Confidence 359999999999997 77778776 7999999987531 1 235677889998765321
Q ss_pred EEEeCCcEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 302 VKVTDKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 302 ~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
..+. . ..+|+||++.|+
T Consensus 60 ~~l~----------~-----~~~d~vV~Spgi 76 (326)
T 3eag_A 60 AQLD----------E-----FKADVYVIGNVA 76 (326)
T ss_dssp GGGG----------S-----CCCSEEEECTTC
T ss_pred HHcC----------C-----CCCCEEEECCCc
Confidence 1000 0 148999999996
No 384
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.41 E-value=0.026 Score=47.39 Aligned_cols=33 Identities=27% Similarity=0.320 Sum_probs=30.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
..+++|+|+|..|...+..|...|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 468999999999999999999999999999975
No 385
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.93 E-value=0.029 Score=56.20 Aligned_cols=35 Identities=26% Similarity=0.356 Sum_probs=32.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~ 92 (485)
.++|+|||.|.+|+++|..|...|++|+++|.+..
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 47899999999999999999999999999998753
No 386
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.75 E-value=0.047 Score=54.45 Aligned_cols=33 Identities=24% Similarity=0.414 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCc
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~ 270 (485)
++|+|||||+.|+-+|..|++. |.+|+|+++.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~--------------G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH--------------DVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT--------------TCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHC--------------CCeEEEEcCCC
Confidence 4899999999999999999996 78999999876
No 387
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.68 E-value=0.026 Score=52.33 Aligned_cols=34 Identities=26% Similarity=0.500 Sum_probs=31.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
..++|+|||||..|...+..|...|++|+||+++
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 4689999999999999999999999999999975
No 388
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.42 E-value=0.036 Score=45.54 Aligned_cols=33 Identities=27% Similarity=0.422 Sum_probs=30.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
+++|+|+|+|..|...+..|...|++|+++|+.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999999999999999999999975
No 389
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.41 E-value=0.043 Score=47.51 Aligned_cols=34 Identities=26% Similarity=0.293 Sum_probs=31.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCC-CCcEEEEcCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNP-SYDVQVISPR 90 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~-g~~V~lie~~ 90 (485)
...+|+|||.|..|..+|..|... |++|+++|++
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 356899999999999999999988 9999999976
No 390
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=93.34 E-value=0.069 Score=54.20 Aligned_cols=37 Identities=35% Similarity=0.401 Sum_probs=32.5
Q ss_pred cccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc
Q 011476 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL 273 (485)
Q Consensus 223 ~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l 273 (485)
.++|+|||||.+|+.+|..|.+. |.+|+|+++++++.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~--------------g~~v~vlE~~~~~g 69 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGA--------------GHQVTVLEASERPG 69 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHH--------------TCEEEEECSSSSSB
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--------------CCeEEEEECCCCCC
Confidence 35899999999999999999987 68999999887654
No 391
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.34 E-value=0.075 Score=43.94 Aligned_cols=33 Identities=21% Similarity=0.469 Sum_probs=30.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
.++|+|||+|..|...+..|...|++|+++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 579999999999999999999999999999876
No 392
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=93.29 E-value=0.071 Score=52.81 Aligned_cols=34 Identities=32% Similarity=0.355 Sum_probs=30.8
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccc
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~ 272 (485)
+|+|||||..|+-+|..|++. |.+|+|+++.+.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~--------------G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN--------------GHEIIVLEKSAMI 35 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT--------------TCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHC--------------CCeEEEEeCCCCC
Confidence 799999999999999999986 6899999998654
No 393
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.26 E-value=0.14 Score=51.43 Aligned_cols=71 Identities=15% Similarity=0.070 Sum_probs=48.8
Q ss_pred hcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceE
Q 011476 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMV 301 (485)
Q Consensus 222 ~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v 301 (485)
++++|+|||||.+|...+..|.+. |.+|+++.... .++ +.+..++.+|+++.+.-
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~--------------ga~V~vi~~~~------~~~----~~~l~~~~~i~~~~~~~- 65 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEA--------------GARLTVNALTF------IPQ----FTVWANEGMLTLVEGPF- 65 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHT--------------TBEEEEEESSC------CHH----HHHHHTTTSCEEEESSC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--------------cCEEEEEcCCC------CHH----HHHHHhcCCEEEEECCC-
Confidence 467999999999999999999986 78999998642 222 23333445676654321
Q ss_pred EEEeCCcEEEEEcCCCeEEEEecCeEEEccC
Q 011476 302 VKVTDKEIFTKVRGNGETSSMPYGMVVWSTG 332 (485)
Q Consensus 302 ~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G 332 (485)
..+.. -.+|+||.|+|
T Consensus 66 -------------~~~~l--~~~~lVi~at~ 81 (457)
T 1pjq_A 66 -------------DETLL--DSCWLAIAATD 81 (457)
T ss_dssp -------------CGGGG--TTCSEEEECCS
T ss_pred -------------Ccccc--CCccEEEEcCC
Confidence 11111 24899999999
No 394
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=93.23 E-value=0.074 Score=54.07 Aligned_cols=35 Identities=23% Similarity=0.534 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccc
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~ 272 (485)
.|+|||||.+|+-+|..|++. .|.+|+|+++++++
T Consensus 12 DVvIIGaGisGLsaA~~L~k~-------------~G~~V~VlE~~~~~ 46 (513)
T 4gde_A 12 DVLVIGAGPTGLGAAKRLNQI-------------DGPSWMIVDSNETP 46 (513)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-------------CCSCEEEEESSSSC
T ss_pred CEEEECCcHHHHHHHHHHHhh-------------CCCCEEEEECCCCC
Confidence 799999999999999999875 36889999877654
No 395
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.08 E-value=0.16 Score=41.66 Aligned_cols=73 Identities=15% Similarity=0.251 Sum_probs=48.1
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEE
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVK 303 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~ 303 (485)
.+++|+|.|.+|..+|..|.+. |.+|+++++.+. .. +.+++.|+.++.+..-
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~--------------g~~v~vid~~~~--------~~----~~~~~~g~~~i~gd~~-- 59 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS--------------DIPLVVIETSRT--------RV----DELRERGVRAVLGNAA-- 59 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCHH--------HH----HHHHHTTCEEEESCTT--
T ss_pred CCEEEECcCHHHHHHHHHHHHC--------------CCCEEEEECCHH--------HH----HHHHHcCCCEEECCCC--
Confidence 4899999999999999999986 689999988652 11 3345568776543210
Q ss_pred EeCCcEEEEEcCCCeEEEEecCeEEEccC
Q 011476 304 VTDKEIFTKVRGNGETSSMPYGMVVWSTG 332 (485)
Q Consensus 304 v~~~~v~~~~~~~G~~~~i~~D~vi~a~G 332 (485)
+.-.+.. -+- -.+|.||.+++
T Consensus 60 ---~~~~l~~--a~i---~~ad~vi~~~~ 80 (140)
T 3fwz_A 60 ---NEEIMQL--AHL---ECAKWLILTIP 80 (140)
T ss_dssp ---SHHHHHH--TTG---GGCSEEEECCS
T ss_pred ---CHHHHHh--cCc---ccCCEEEEECC
Confidence 0000000 011 25899999998
No 396
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.97 E-value=0.045 Score=54.94 Aligned_cols=35 Identities=29% Similarity=0.301 Sum_probs=32.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
..++|.|||.|.+|+++|..|.+.|++|++.|.++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 36799999999999999999999999999999864
No 397
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=92.89 E-value=0.084 Score=52.21 Aligned_cols=34 Identities=24% Similarity=0.325 Sum_probs=31.0
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccc
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~ 272 (485)
+|+|||||.+|+-+|..|++. |.+|+|+++++.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~--------------G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA--------------GHEVEVFERLPIT 35 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT--------------TCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC--------------CCceEEEeCCCCC
Confidence 799999999999999999986 6899999998764
No 398
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=92.69 E-value=0.067 Score=52.33 Aligned_cols=35 Identities=23% Similarity=0.277 Sum_probs=32.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
.+.+|+|||+|.+|+.+|..|...|.+|+++|+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35799999999999999999999999999999874
No 399
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=92.68 E-value=0.09 Score=50.63 Aligned_cols=33 Identities=24% Similarity=0.419 Sum_probs=30.3
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcc
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~ 271 (485)
+|+|||||.+|+-+|..|++. |.+|+|+++.+.
T Consensus 6 dvvIIG~G~~Gl~~A~~La~~--------------G~~V~vlE~~~~ 38 (369)
T 3dme_A 6 DCIVIGAGVVGLAIARALAAG--------------GHEVLVAEAAEG 38 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSS
T ss_pred CEEEECCCHHHHHHHHHHHhC--------------CCeEEEEeCCCC
Confidence 799999999999999999986 789999999863
No 400
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.68 E-value=0.16 Score=42.57 Aligned_cols=36 Identities=17% Similarity=0.198 Sum_probs=31.4
Q ss_pred hcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcc
Q 011476 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (485)
Q Consensus 222 ~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~ 271 (485)
.+++++|+|+|.+|..+|..|... |.+|+++++.+.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~--------------g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSS--------------GHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC--------------CCeEEEEECCHH
Confidence 456999999999999999999886 679999988764
No 401
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=92.64 E-value=0.079 Score=53.10 Aligned_cols=40 Identities=35% Similarity=0.512 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcc
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~ 271 (485)
++|+|||||.+|+-+|..|.+.+.+ -.++.+|+|+++.++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~--------~~~~~~V~vlEa~~~ 45 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKE--------KNLPLELTLVEASPR 45 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTT--------TTCSEEEEEECSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccc--------cCCCCCEEEEECCCC
Confidence 4899999999999999999997310 001279999998754
No 402
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=92.62 E-value=0.099 Score=50.97 Aligned_cols=32 Identities=31% Similarity=0.419 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCc
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~ 270 (485)
+|+|||||+.|+++|..+++. |.+|+|+++++
T Consensus 3 dViVIGgG~AG~~AA~~la~~--------------G~~V~liE~~~ 34 (443)
T 3g5s_A 3 RVNVVGAGLAGSEAAWTLLRL--------------GVPVRLFEMRP 34 (443)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--------------TCCEEEECCTT
T ss_pred CEEEECchHHHHHHHHHHHHC--------------CCcEEEEeccC
Confidence 799999999999999999996 78999999765
No 403
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=92.60 E-value=0.088 Score=52.21 Aligned_cols=34 Identities=32% Similarity=0.618 Sum_probs=30.8
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccc
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~ 272 (485)
+|+|||||..|+-+|..|++. |.+|+|+++++++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~--------------G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA--------------GKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT--------------TCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc--------------CCeEEEEecCCCc
Confidence 799999999999999999996 6899999987654
No 404
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=92.42 E-value=0.083 Score=49.84 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=31.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
.++|.|||+|.-|.+.|..|+..|++|+++|+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999763
No 405
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=92.30 E-value=0.096 Score=52.71 Aligned_cols=33 Identities=27% Similarity=0.528 Sum_probs=28.7
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCc--eEEEEecCc
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV--KITLLEAAD 270 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~--~Vtlv~~~~ 270 (485)
++|+|||||.+|+-+|..|.+. |. +|+|+++++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~--------------G~~~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA--------------PCPPKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS--------------SSCCEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhC--------------CCCCcEEEEeCCC
Confidence 3899999999999999999986 56 899998754
No 406
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.24 E-value=0.25 Score=40.42 Aligned_cols=34 Identities=18% Similarity=0.424 Sum_probs=29.9
Q ss_pred cccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCc
Q 011476 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (485)
Q Consensus 223 ~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~ 270 (485)
.++++|+|+|.+|..+|..|.+. |.+|+++++.+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~--------------g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA--------------GKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--------------CCeEEEEECCH
Confidence 35899999999999999999986 68999998854
No 407
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=92.24 E-value=0.11 Score=51.27 Aligned_cols=35 Identities=31% Similarity=0.569 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCC-ceEEEEecCccc
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS-VKITLLEAADHI 272 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g-~~Vtlv~~~~~~ 272 (485)
.+|+|||||..|+-+|..|.+. | .+|+|+++.+++
T Consensus 7 ~~v~IIGaG~aGl~aA~~L~~~--------------g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 7 SRIAIIGAGPAGLAAGMYLEQA--------------GFHDYTILERTDHV 42 (424)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--------------TCCCEEEECSSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhC--------------CCCcEEEEECCCCC
Confidence 4899999999999999999985 6 799999988765
No 408
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.21 E-value=0.068 Score=47.73 Aligned_cols=32 Identities=19% Similarity=0.354 Sum_probs=29.9
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
++|+|+|+|..|...|..|...|++|+++|++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 37999999999999999999999999999976
No 409
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=92.14 E-value=0.13 Score=50.15 Aligned_cols=37 Identities=27% Similarity=0.384 Sum_probs=32.3
Q ss_pred hcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecC-ccc
Q 011476 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAA-DHI 272 (485)
Q Consensus 222 ~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~-~~~ 272 (485)
...+|+|||+|.+|+-+|..|.+. |.+|+|++++ +++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~--------------G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRA--------------GHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHT--------------SCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHC--------------CCcEEEEecccccc
Confidence 346999999999999999999986 6899999998 554
No 410
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=91.98 E-value=0.12 Score=50.30 Aligned_cols=33 Identities=30% Similarity=0.485 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcc
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~ 271 (485)
+|+|||||.+|+-+|..|++. |.+|+|+++.+.
T Consensus 5 dvvIIGaG~~Gl~~A~~La~~--------------G~~V~vie~~~~ 37 (389)
T 2gf3_A 5 DVIVVGAGSMGMAAGYQLAKQ--------------GVKTLLVDAFDP 37 (389)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSCS
T ss_pred CEEEECCCHHHHHHHHHHHhC--------------CCeEEEEeCCCC
Confidence 799999999999999999986 689999998753
No 411
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=91.84 E-value=0.15 Score=49.16 Aligned_cols=31 Identities=23% Similarity=0.348 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecC
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAA 269 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~ 269 (485)
+|+|||||.+|+-+|..|++. |.+|+|+++.
T Consensus 8 dVvVIG~Gi~Gls~A~~La~~--------------G~~V~vle~~ 38 (363)
T 1c0p_A 8 RVVVLGSGVIGLSSALILARK--------------GYSVHILARD 38 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHhC--------------CCEEEEEecc
Confidence 899999999999999999985 7899999975
No 412
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=91.83 E-value=0.12 Score=52.85 Aligned_cols=37 Identities=19% Similarity=0.196 Sum_probs=28.4
Q ss_pred cEEEcCceEEEEeC---CcEEEEEcCCCeEEEEecCeEEEccC
Q 011476 293 IDVKLGSMVVKVTD---KEIFTKVRGNGETSSMPYGMVVWSTG 332 (485)
Q Consensus 293 V~v~~~~~v~~v~~---~~v~~~~~~~G~~~~i~~D~vi~a~G 332 (485)
.+|++++.|++|.. +.+.+.. .+|+. +.+|.||++++
T Consensus 215 ~~i~~~~~V~~I~~~~~~~v~v~~-~~g~~--~~ad~VI~t~p 254 (516)
T 1rsg_A 215 NWLKLSCEVKSITREPSKNVTVNC-EDGTV--YNADYVIITVP 254 (516)
T ss_dssp GGEETTCCEEEEEECTTSCEEEEE-TTSCE--EEEEEEEECCC
T ss_pred CEEEECCEEEEEEEcCCCeEEEEE-CCCcE--EECCEEEECCC
Confidence 35899999999963 3465554 56765 89999999987
No 413
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.81 E-value=0.073 Score=51.65 Aligned_cols=35 Identities=26% Similarity=0.256 Sum_probs=31.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
.+.+|+|||+|..|+.+|..|...|.+|+++|+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35799999999999999999999999999999774
No 414
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.75 E-value=0.095 Score=49.90 Aligned_cols=33 Identities=27% Similarity=0.351 Sum_probs=30.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
+++|.|||+|.-|.+.|..|.+.|++|++++++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 368999999999999999999999999999975
No 415
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=91.73 E-value=0.14 Score=50.24 Aligned_cols=32 Identities=31% Similarity=0.437 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHHH-hhHHHHHhhCcCCCCC-ceEEEEecCc
Q 011476 225 HFVIVGGGPTGVEFAAELHD-FVDEDLFKLYPKVKDS-VKITLLEAAD 270 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~-~~~~~~~~~~p~~~~g-~~Vtlv~~~~ 270 (485)
+|+|||||.+|+-+|..|++ . | .+|+|+++.+
T Consensus 23 dVvIIG~G~~Gl~~A~~La~~~--------------G~~~V~vlE~~~ 56 (405)
T 2gag_B 23 DAIIVGGGGHGLATAYFLAKNH--------------GITNVAVLEKGW 56 (405)
T ss_dssp EEEEECCSHHHHHHHHHHHHHH--------------CCCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHhc--------------CCCcEEEEeCCC
Confidence 89999999999999999998 6 6 7999999876
No 416
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.49 E-value=0.1 Score=49.84 Aligned_cols=35 Identities=11% Similarity=0.191 Sum_probs=31.3
Q ss_pred CCCeEEEECCcHHHHH-HHHhcCCCCCcEEEEcCCC
Q 011476 57 KKKKVVVLGTGWAGTS-FLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~-aA~~L~~~g~~V~lie~~~ 91 (485)
.+++|.|||.|.+|++ +|..|.+.|++|++.|.++
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4579999999999997 7888999999999999764
No 417
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=91.47 E-value=0.14 Score=52.24 Aligned_cols=34 Identities=41% Similarity=0.659 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcc
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~ 271 (485)
.+|+|||||..|+-+|..|.+. |.+|+|++++++
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~--------------G~~V~vlE~~~~ 38 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDS--------------GLNVVVLEARDR 38 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHT--------------TCCEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC--------------CCCEEEEeCCCC
Confidence 3899999999999999999986 678999887654
No 418
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=91.43 E-value=0.16 Score=48.82 Aligned_cols=38 Identities=18% Similarity=0.292 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCc
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~ 270 (485)
+|+|||||.+|+-+|..|++.+... .++.+|+|+++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~--------~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSV--------LQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTT--------SSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhcccc--------CCCceEEEEECCC
Confidence 7999999999999999999863000 0127999999874
No 419
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=91.42 E-value=0.16 Score=51.27 Aligned_cols=35 Identities=40% Similarity=0.584 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccc
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~ 272 (485)
.+|+|||||..|+-+|..|.+. |.+|+|+++.+++
T Consensus 12 ~~v~IIGaG~aGl~aA~~L~~~--------------g~~v~v~E~~~~~ 46 (489)
T 2jae_A 12 HSVVVLGGGPAGLCSAFELQKA--------------GYKVTVLEARTRP 46 (489)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC--------------CCCEEEEeccCCC
Confidence 4899999999999999999986 6899999988764
No 420
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=91.35 E-value=0.31 Score=49.40 Aligned_cols=70 Identities=23% Similarity=0.275 Sum_probs=51.5
Q ss_pred hcccEEEECCChhHHH-HHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCce
Q 011476 222 RILHFVIVGGGPTGVE-FAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSM 300 (485)
Q Consensus 222 ~~~~vvVVGgG~~g~e-~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~ 300 (485)
..++|.|||-|-+|+- +|..|.+. |.+|+..+.... + ..+.|++.||+++.+..
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~--------------G~~V~~~D~~~~------~-----~~~~l~~~gi~~~~g~~ 75 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANE--------------GYQISGSDLAPN------S-----VTQHLTALGAQIYFHHR 75 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHT--------------TCEEEEECSSCC------H-----HHHHHHHTTCEEESSCC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhC--------------CCeEEEEECCCC------H-----HHHHHHHCCCEEECCCC
Confidence 4579999999999996 78888886 789999987642 1 12567888999987632
Q ss_pred EEEEeCCcEEEEEcCCCeEEEEecCeEEEccCC
Q 011476 301 VVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (485)
Q Consensus 301 v~~v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (485)
.. .. ..+|+||++.|+
T Consensus 76 ~~---------------~~--~~~d~vV~Spgi 91 (494)
T 4hv4_A 76 PE---------------NV--LDASVVVVSTAI 91 (494)
T ss_dssp GG---------------GG--TTCSEEEECTTS
T ss_pred HH---------------Hc--CCCCEEEECCCC
Confidence 11 00 248999999996
No 421
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=91.20 E-value=0.13 Score=49.22 Aligned_cols=34 Identities=24% Similarity=0.283 Sum_probs=30.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCC-cEEEEcCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~-~V~lie~~~ 91 (485)
+.+|+|||+|..|.+.|..|+..|+ +|+++|.++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4699999999999999999998888 999999764
No 422
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.06 E-value=0.1 Score=50.57 Aligned_cols=34 Identities=29% Similarity=0.346 Sum_probs=31.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCC-cEEEEcCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPR 90 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~-~V~lie~~ 90 (485)
...+|||+|+|.||+++|..|...|. +|+++|++
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 45799999999999999999988888 99999987
No 423
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=91.03 E-value=0.12 Score=48.91 Aligned_cols=34 Identities=18% Similarity=0.387 Sum_probs=31.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
..+|.|||+|.-|...|..++..|++|+|+|..+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999764
No 424
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=90.95 E-value=0.18 Score=50.56 Aligned_cols=37 Identities=19% Similarity=0.244 Sum_probs=33.0
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccc
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN 274 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~ 274 (485)
.+|+|||+|..|+-+|..|++. |.+|+++++.+++..
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~--------------G~~V~vlE~~~~~GG 48 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVD--------------GKKVLHIDKQDHYGG 48 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCG
T ss_pred CCEEEECcCHHHHHHHHHHHHC--------------CCeEEEEeCCCCCCc
Confidence 3899999999999999999986 789999999987643
No 425
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=90.91 E-value=0.18 Score=50.36 Aligned_cols=34 Identities=32% Similarity=0.606 Sum_probs=29.5
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcc
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~ 271 (485)
.+|+|||||..|+-+|..|.+. |.+|+|++++++
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~--------------g~~v~v~E~~~~ 39 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKA--------------GLSVAVIEARDR 39 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC--------------CCcEEEEECCCC
Confidence 4899999999999999999986 678999887653
No 426
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=90.89 E-value=0.2 Score=48.99 Aligned_cols=35 Identities=26% Similarity=0.503 Sum_probs=31.3
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL 273 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l 273 (485)
+|+|||+|.+|+-+|..|.+. |.+|+++++++++.
T Consensus 5 ~v~iiG~G~~Gl~~A~~l~~~--------------g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 5 KILIVGAGFSGAVIGRQLAEK--------------GHQVHIIDQRDHIG 39 (384)
T ss_dssp EEEEECCSHHHHHHHHHHHTT--------------TCEEEEEESSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCcEEEEEecCCcC
Confidence 899999999999999999985 68999999987653
No 427
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.85 E-value=0.13 Score=50.67 Aligned_cols=34 Identities=29% Similarity=0.379 Sum_probs=31.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
+.+|+|||+|.+|+.++..+...|.+|+++|+++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 5799999999999999999999999999999763
No 428
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=90.85 E-value=0.58 Score=44.33 Aligned_cols=31 Identities=16% Similarity=0.377 Sum_probs=28.3
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecC
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAA 269 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~ 269 (485)
+|+|||+|.+|.-+|..|.+. |.+|+++.|.
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~--------------g~~V~~~~r~ 34 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKT--------------GHCVSVVSRS 34 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHT--------------TCEEEEECST
T ss_pred EEEEECcCHHHHHHHHHHHhC--------------CCeEEEEeCC
Confidence 899999999999999999985 6899999875
No 429
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=90.77 E-value=0.14 Score=47.75 Aligned_cols=34 Identities=24% Similarity=0.275 Sum_probs=31.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
.++|.|||+|.-|.+.|..|+..|++|+++|+++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4689999999999999999999999999999764
No 430
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=90.76 E-value=0.14 Score=49.60 Aligned_cols=35 Identities=11% Similarity=0.126 Sum_probs=32.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~ 92 (485)
+++|+|||||..|..+++.+++.|++|+++|+++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 47999999999999999999999999999997754
No 431
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=90.73 E-value=0.21 Score=49.64 Aligned_cols=33 Identities=27% Similarity=0.373 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCc-eEEEEecCcc
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV-KITLLEAADH 271 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~-~Vtlv~~~~~ 271 (485)
+|+|||||..|+-+|..|++. |. +|+|+++.+.
T Consensus 8 dVvIIGgG~aGlsaA~~La~~--------------G~~~V~vlE~~~~ 41 (438)
T 3dje_A 8 SLLIVGAGTWGTSTALHLARR--------------GYTNVTVLDPYPV 41 (438)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--------------TCCCEEEEESSCS
T ss_pred CEEEECCCHHHHHHHHHHHHc--------------CCCcEEEEeCCCC
Confidence 799999999999999999996 67 8999998764
No 432
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.67 E-value=0.54 Score=44.89 Aligned_cols=86 Identities=13% Similarity=0.179 Sum_probs=53.7
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEEE
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKV 304 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~v 304 (485)
+|.|||+|.+|.-+|..|.+. |.+|+++.|.++ .+.+++.|+.+.....-..+
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~--------------g~~V~~~~r~~~-------------~~~~~~~g~~~~~~~~~~~~ 57 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALA--------------GEAINVLARGAT-------------LQALQTAGLRLTEDGATHTL 57 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHT--------------TCCEEEECCHHH-------------HHHHHHTCEEEEETTEEEEE
T ss_pred EEEEECcCHHHHHHHHHHHHC--------------CCEEEEEEChHH-------------HHHHHHCCCEEecCCCeEEE
Confidence 899999999999999999985 679999976321 14566778876532110000
Q ss_pred eCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHh
Q 011476 305 TDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV 346 (485)
Q Consensus 305 ~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~ 346 (485)
.+... .+-.. .-++|+||+|+. .+.+..+++.+
T Consensus 58 ---~~~~~--~~~~~-~~~~D~Vilavk---~~~~~~~~~~l 90 (335)
T 3ghy_A 58 ---PVRAT--HDAAA-LGEQDVVIVAVK---APALESVAAGI 90 (335)
T ss_dssp ---CCEEE--SCHHH-HCCCSEEEECCC---HHHHHHHHGGG
T ss_pred ---eeeEE--CCHHH-cCCCCEEEEeCC---chhHHHHHHHH
Confidence 11111 11111 135899999997 34555555555
No 433
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=90.61 E-value=0.21 Score=49.05 Aligned_cols=36 Identities=25% Similarity=0.473 Sum_probs=31.5
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL 273 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l 273 (485)
.+++|||||++|+-+|..|++. |.+|+|+++++++.
T Consensus 30 ~dv~IIGaG~aGl~aA~~l~~~--------------g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 30 FDYLIVGAGFAGSVLAERLASS--------------GQRVLIVDRRPHIG 65 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSS
T ss_pred CCEEEECccHHHHHHHHHHHHC--------------CCceEEEeccCCCC
Confidence 3899999999999999999885 68999999887653
No 434
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=90.57 E-value=0.11 Score=49.20 Aligned_cols=33 Identities=21% Similarity=0.360 Sum_probs=29.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
.++|.|||+|.-|.+.|..|.+.|++|++++++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 368999999999999999999999999999975
No 435
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.55 E-value=0.14 Score=48.55 Aligned_cols=33 Identities=15% Similarity=0.270 Sum_probs=30.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCC--cEEEEcCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPR 90 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~--~V~lie~~ 90 (485)
+.+|+|||+|..|.+.|..|...|+ +|+++|+.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4699999999999999999998898 99999976
No 436
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=90.51 E-value=0.16 Score=48.05 Aligned_cols=36 Identities=25% Similarity=0.272 Sum_probs=32.5
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
..+++|.|||.|.-|...|..|...|++|+++++.+
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 446799999999999999999999999999999763
No 437
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=90.47 E-value=0.18 Score=50.64 Aligned_cols=34 Identities=29% Similarity=0.550 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcc
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~ 271 (485)
.+|+|||||.+|+-+|..|.+. |.+|+|+++.++
T Consensus 17 ~~v~iiG~G~~Gl~aa~~l~~~--------------g~~v~v~E~~~~ 50 (478)
T 2ivd_A 17 MNVAVVGGGISGLAVAHHLRSR--------------GTDAVLLESSAR 50 (478)
T ss_dssp CCEEEECCBHHHHHHHHHHHTT--------------TCCEEEECSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHC--------------CCCEEEEEcCCC
Confidence 4899999999999999999985 689999988764
No 438
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=90.47 E-value=0.16 Score=49.73 Aligned_cols=35 Identities=23% Similarity=0.275 Sum_probs=31.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
.+.+|+|||+|.+|+.++..+...|.+|+++|+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46799999999999999999999999999999764
No 439
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=90.46 E-value=0.17 Score=44.81 Aligned_cols=36 Identities=14% Similarity=0.307 Sum_probs=31.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~ 92 (485)
..++|.|||+|..|.+.|..|...|++|+++++++.
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 356899999999999999999999999999998754
No 440
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=90.43 E-value=0.12 Score=49.90 Aligned_cols=34 Identities=32% Similarity=0.401 Sum_probs=31.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCC-cEEEEcCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPR 90 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~-~V~lie~~ 90 (485)
...+|||+|+|.+|..+|..|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45799999999999999999998888 79999987
No 441
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=90.36 E-value=0.22 Score=50.38 Aligned_cols=35 Identities=34% Similarity=0.544 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccc
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~ 272 (485)
.+|+|||+|..|+-+|..|.+. |.+|+|+++++++
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~--------------g~~v~v~E~~~~~ 74 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA--------------GFKTLLLEARDRI 74 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT--------------TCCEEEECSSSBS
T ss_pred CCEEEECCcHHHHHHHHHHHHC--------------CCCEEEEeCCCCC
Confidence 4899999999999999999986 6789999877643
No 442
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=90.35 E-value=0.19 Score=46.42 Aligned_cols=35 Identities=23% Similarity=0.373 Sum_probs=30.7
Q ss_pred hcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCc
Q 011476 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (485)
Q Consensus 222 ~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~ 270 (485)
++++|+|||||.+|...+..|.+. |.+|+++....
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~--------------Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPT--------------GCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGG--------------TCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhC--------------CCEEEEEcCCC
Confidence 457999999999999999999987 78999997643
No 443
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=90.28 E-value=0.24 Score=49.79 Aligned_cols=35 Identities=43% Similarity=0.573 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcc
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~ 271 (485)
+|+|||||.+|+-+|..|.+.+ ++.+|+|+++.+.
T Consensus 6 ~v~IiGaG~~Gl~~A~~L~~~g------------~~~~v~v~E~~~~ 40 (475)
T 3lov_A 6 RLVIVGGGITGLAAAYYAERAF------------PDLNITLLEAGER 40 (475)
T ss_dssp EEEEECCBHHHHHHHHHHHHHC------------TTSEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHhC------------CCCCEEEEECCCC
Confidence 8999999999999999999972 1289999988654
No 444
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=90.26 E-value=0.22 Score=50.48 Aligned_cols=35 Identities=23% Similarity=0.428 Sum_probs=31.6
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccc
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~ 272 (485)
.+|+|||||..|+-+|..|.+. |.+|+|+++.+++
T Consensus 14 ~~v~iiG~G~~Gl~aA~~l~~~--------------g~~v~v~E~~~~~ 48 (504)
T 1sez_A 14 KRVAVIGAGVSGLAAAYKLKIH--------------GLNVTVFEAEGKA 48 (504)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--------------SCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHC--------------CCcEEEEEeCCCC
Confidence 4899999999999999999985 7899999998765
No 445
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=90.08 E-value=0.23 Score=48.04 Aligned_cols=34 Identities=26% Similarity=0.344 Sum_probs=31.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
+.+|.|||+|.-|.+.|..|++.|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999863
No 446
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.02 E-value=0.34 Score=40.30 Aligned_cols=33 Identities=15% Similarity=0.302 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCc
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~ 270 (485)
++++|+|+|.+|..++..|.+. |.+|+++++.+
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~--------------g~~V~vid~~~ 36 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR--------------GQNVTVISNLP 36 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--------------TCCEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHHC--------------CCCEEEEECCC
Confidence 4899999999999999999885 68999998863
No 447
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=89.89 E-value=0.17 Score=47.67 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=30.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
+.+|.|||+|..|.+.|..|...|++|++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 358999999999999999999999999999875
No 448
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=89.81 E-value=1.3 Score=41.79 Aligned_cols=87 Identities=11% Similarity=0.208 Sum_probs=52.5
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEcCceEEE
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVK 303 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~ 303 (485)
.+|.|||+|..|.-+|..|.+. |.+|+++ +++. . .+.+++.|+.+..... .
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~--------------G~~V~l~-~~~~-------~-----~~~i~~~g~~~~~~~~-~- 70 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARA--------------GHEVILI-ARPQ-------H-----VQAIEATGLRLETQSF-D- 70 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--------------TCEEEEE-CCHH-------H-----HHHHHHHCEEEECSSC-E-
T ss_pred CcEEEECcCHHHHHHHHHHHHC--------------CCeEEEE-EcHh-------H-----HHHHHhCCeEEEcCCC-c-
Confidence 5999999999999999999985 6899999 6532 1 1444556766542111 0
Q ss_pred EeCCcEEEEEcCCCeEEEEecCeEEEccCCCCCcchHHHHHHh
Q 011476 304 VTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV 346 (485)
Q Consensus 304 v~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~ 346 (485)
.. ..+... .+-+. .-++|+||+|+. ...+..+++.+
T Consensus 71 ~~-~~~~~~--~~~~~-~~~~D~vilavk---~~~~~~~l~~l 106 (318)
T 3hwr_A 71 EQ-VKVSAS--SDPSA-VQGADLVLFCVK---STDTQSAALAM 106 (318)
T ss_dssp EE-ECCEEE--SCGGG-GTTCSEEEECCC---GGGHHHHHHHH
T ss_pred EE-Eeeeee--CCHHH-cCCCCEEEEEcc---cccHHHHHHHH
Confidence 00 011111 11111 125899999987 33455666655
No 449
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=89.66 E-value=0.2 Score=46.60 Aligned_cols=32 Identities=31% Similarity=0.338 Sum_probs=30.0
Q ss_pred eEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 60 KVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 60 ~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
+|.|||+|..|.+.|..|.+.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 79999999999999999999999999999764
No 450
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=89.65 E-value=0.26 Score=51.96 Aligned_cols=36 Identities=36% Similarity=0.658 Sum_probs=31.4
Q ss_pred hcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcc
Q 011476 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (485)
Q Consensus 222 ~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~ 271 (485)
..++|+|||+|+.|+.+|..|.+. |.+|+++++.++
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~--------------g~~v~~~e~~~~ 141 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSF--------------GMDVTLLEARDR 141 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHT--------------TCEEEEECSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHC--------------CCeEEEEecCCC
Confidence 457999999999999999999986 689999987654
No 451
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=89.64 E-value=0.19 Score=50.34 Aligned_cols=33 Identities=18% Similarity=0.329 Sum_probs=30.9
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
++|.|||.|..|+..|..|+..|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999764
No 452
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.63 E-value=0.19 Score=48.64 Aligned_cols=33 Identities=33% Similarity=0.345 Sum_probs=30.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
+++|+|+|+|.+|..++..|...|.+|++++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 479999999999999999999999999999976
No 453
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=89.54 E-value=0.84 Score=42.97 Aligned_cols=45 Identities=22% Similarity=0.403 Sum_probs=35.0
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEE
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVK 296 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~ 296 (485)
+|+|||+|.+|.-+|..|. . |.+|+++.|.+. . .+.+++.|+.+.
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~--------------g~~V~~~~r~~~-------~-----~~~l~~~G~~~~ 48 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-L--------------YHDVTVVTRRQE-------Q-----AAAIQSEGIRLY 48 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-T--------------TSEEEEECSCHH-------H-----HHHHHHHCEEEE
T ss_pred EEEEECCCHHHHHHHHHHh-c--------------CCceEEEECCHH-------H-----HHHHHhCCceEe
Confidence 8999999999999999998 5 679999988642 1 144556687775
No 454
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=89.51 E-value=0.28 Score=53.13 Aligned_cols=36 Identities=36% Similarity=0.658 Sum_probs=31.5
Q ss_pred hcccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcc
Q 011476 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (485)
Q Consensus 222 ~~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~ 271 (485)
..++|+|||+|+.|+.+|..|.+. |.+|+|+++.++
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~--------------g~~v~v~E~~~~ 312 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSF--------------GMDVTLLEARDR 312 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--------------CCcEEEEEecCc
Confidence 467999999999999999999986 689999987754
No 455
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=89.50 E-value=0.16 Score=50.89 Aligned_cols=34 Identities=12% Similarity=0.165 Sum_probs=31.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
..++|+|||+|..|...+..|...|.+|+|++++
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 3579999999999999999999999999999986
No 456
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=89.48 E-value=0.18 Score=49.97 Aligned_cols=39 Identities=18% Similarity=0.165 Sum_probs=34.2
Q ss_pred CCCCCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 53 EMGIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 53 ~~~~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
|....+.+|.|||.|+.|+..|..++..|++|+.+|-++
T Consensus 16 p~~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 16 PRGSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CTTCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 344567899999999999999999999999999999663
No 457
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=89.45 E-value=0.24 Score=46.73 Aligned_cols=32 Identities=28% Similarity=0.334 Sum_probs=29.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
+.+|.|||+|.-|.+.|..|. .|++|+++++.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECC
Confidence 468999999999999999999 99999999976
No 458
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=89.44 E-value=0.26 Score=49.12 Aligned_cols=30 Identities=30% Similarity=0.509 Sum_probs=28.2
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCC-ceEEEEec
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS-VKITLLEA 268 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g-~~Vtlv~~ 268 (485)
+|+|||||.+|+-+|..|++. | .+|+|+++
T Consensus 25 dVvIIGgGiaGls~A~~La~~--------------G~~~V~vlE~ 55 (448)
T 3axb_A 25 DYVVVGAGVVGLAAAYYLKVW--------------SGGSVLVVDA 55 (448)
T ss_dssp EEEEECCSHHHHHHHHHHHHH--------------HCSCEEEEES
T ss_pred CEEEECcCHHHHHHHHHHHhC--------------CCCcEEEEcc
Confidence 799999999999999999997 5 79999998
No 459
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=89.40 E-value=0.22 Score=44.88 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=29.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
..++++|+|+|..|...|..|...|+ |+++|++
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~ 40 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDE 40 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECC
Confidence 35689999999999999999999999 9999976
No 460
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=89.38 E-value=0.27 Score=46.11 Aligned_cols=34 Identities=21% Similarity=0.202 Sum_probs=31.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
+++|.|||.|.-|...|..|...|++|+++|+++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999774
No 461
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=89.35 E-value=0.27 Score=52.14 Aligned_cols=34 Identities=26% Similarity=0.282 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcc
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~ 271 (485)
.+|+|||||.+|+-+|..|++. |.+|+|+++.+.
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~~--------------G~~V~vlEk~~~ 298 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQRR--------------GAVVTLYCADAQ 298 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHTT--------------TCCEEEEESSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC--------------CCcEEEEeCCCc
Confidence 4899999999999999999986 789999998653
No 462
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=89.34 E-value=0.4 Score=37.41 Aligned_cols=34 Identities=26% Similarity=0.305 Sum_probs=29.3
Q ss_pred cccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCC-ceEEEEecCc
Q 011476 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS-VKITLLEAAD 270 (485)
Q Consensus 223 ~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g-~~Vtlv~~~~ 270 (485)
.++++|+|+|.+|..++..|.+. | .+|+++.+.+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~--------------g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTS--------------SNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC--------------SSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhC--------------CCceEEEEeCCH
Confidence 35899999999999999999885 5 7899998864
No 463
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.26 E-value=0.42 Score=38.66 Aligned_cols=33 Identities=24% Similarity=0.417 Sum_probs=28.9
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCc
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~ 270 (485)
.+++|+|+|.+|..+|..|.+. |.+|+++++.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~--------------g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK--------------GHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--------------CCeEEEEECCH
Confidence 4899999999999999999885 68999998754
No 464
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=89.24 E-value=0.21 Score=47.43 Aligned_cols=34 Identities=18% Similarity=0.387 Sum_probs=31.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
.++|.|||+|.-|.+.|..|+..|++|+++|+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999774
No 465
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=89.18 E-value=0.27 Score=47.68 Aligned_cols=34 Identities=35% Similarity=0.642 Sum_probs=30.3
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccc
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~ 272 (485)
+++|||||..|+-+|..|.+. |.+|+++++++++
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~--------------g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKL--------------NKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGG--------------TCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhC--------------CCcEEEEecCCCC
Confidence 799999999999999999885 6899999988754
No 466
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=89.17 E-value=0.29 Score=48.85 Aligned_cols=37 Identities=11% Similarity=0.206 Sum_probs=33.0
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCCC
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~~ 92 (485)
...++|.|||+|.-|.+.|..|+..|++|+++|.++.
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 3457999999999999999999999999999998754
No 467
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.02 E-value=0.26 Score=47.07 Aligned_cols=34 Identities=24% Similarity=0.414 Sum_probs=30.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCC-cEEEEcCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~-~V~lie~~~ 91 (485)
+.+|+|||+|..|.+.|..|+..|+ +|+++|.+.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 4699999999999999999998898 999999764
No 468
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=88.99 E-value=0.71 Score=43.56 Aligned_cols=45 Identities=27% Similarity=0.423 Sum_probs=36.0
Q ss_pred cEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccccccccHHHHHHHHHHHHhCCcEEEc
Q 011476 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKL 297 (485)
Q Consensus 225 ~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~ 297 (485)
+|.|||+|.+|.-+|..|.+. |.+|+++.|.+ . +.+++.|+.+..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~--------------g~~V~~~~r~~---------~-----~~i~~~g~~~~~ 48 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRS--------------GEDVHFLLRRD---------Y-----EAIAGNGLKVFS 48 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHT--------------SCCEEEECSTT---------H-----HHHHHTCEEEEE
T ss_pred EEEEECcCHHHHHHHHHHHHC--------------CCeEEEEEcCc---------H-----HHHHhCCCEEEc
Confidence 899999999999999999985 67999998743 0 445667877653
No 469
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=88.96 E-value=0.38 Score=48.27 Aligned_cols=35 Identities=20% Similarity=0.225 Sum_probs=31.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
..++|.|||+|.-|...|..|+..|++|+++|+++
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34689999999999999999999999999999764
No 470
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=88.91 E-value=0.28 Score=45.94 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=30.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
..++|.|||+|.-|-..|..|+ .|++|+++|+++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4689999999999999999999 999999999764
No 471
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=88.91 E-value=0.35 Score=47.48 Aligned_cols=36 Identities=25% Similarity=0.426 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccc
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~ 272 (485)
.+|+|||||.+|+-+|..|.+. .|.+|+|+++++++
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~-------------~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQ-------------LDKRVLVLERRPHI 43 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-------------SCCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHh-------------CCCCEEEEeCCCCC
Confidence 3899999999999999999985 15799999988765
No 472
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=88.87 E-value=0.26 Score=45.69 Aligned_cols=34 Identities=12% Similarity=0.268 Sum_probs=30.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
++++|+|+|+|..|...+..|...|++|+++.+.
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcC
Confidence 3579999999999999999999999999999875
No 473
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=88.82 E-value=0.22 Score=47.30 Aligned_cols=34 Identities=29% Similarity=0.477 Sum_probs=31.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
..++|.|||.|..|...|..|...|++|+++++.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCC
Confidence 4579999999999999999999999999999976
No 474
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=88.79 E-value=0.2 Score=45.83 Aligned_cols=34 Identities=15% Similarity=0.322 Sum_probs=30.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCC-cEEEEcCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~-~V~lie~~~ 91 (485)
.++|+|||+|-.|..+|.+|+..|. +++|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4699999999999999999999997 799999763
No 475
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=88.72 E-value=0.28 Score=45.24 Aligned_cols=33 Identities=18% Similarity=0.375 Sum_probs=30.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
.++++|||+|-+|-+++..|...|.+|+|+++.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 689999999999999999999889999999876
No 476
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=88.72 E-value=0.24 Score=50.01 Aligned_cols=34 Identities=18% Similarity=0.228 Sum_probs=31.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
..+|.|||.|..|+..|..|+..|++|+++|.++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4699999999999999999999999999999763
No 477
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=88.56 E-value=0.25 Score=47.27 Aligned_cols=32 Identities=16% Similarity=0.312 Sum_probs=29.8
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
++|.|||+|.-|.+.|..|++.|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 58999999999999999999999999999863
No 478
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=88.55 E-value=0.16 Score=47.70 Aligned_cols=34 Identities=21% Similarity=0.326 Sum_probs=30.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
+++|.|||+|.-|.+.|..|.+.|++|++++++.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 3689999999999999999999999999999863
No 479
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=88.49 E-value=0.26 Score=44.78 Aligned_cols=36 Identities=25% Similarity=0.362 Sum_probs=31.7
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
...++|.|||.|.-|.+.|..|...|++|+++++++
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 446899999999999999999999999999999764
No 480
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=88.43 E-value=1.5 Score=43.98 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=31.1
Q ss_pred cccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCc-eEEEEecCcc
Q 011476 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV-KITLLEAADH 271 (485)
Q Consensus 223 ~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~-~Vtlv~~~~~ 271 (485)
..+|.|||.|+.|.-+|..|++. +|. +|+++++.+.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~-------------~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADA-------------PCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHS-------------TTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHh-------------CCCCeEEEEECChh
Confidence 35899999999999999999984 157 9999998875
No 481
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=88.40 E-value=0.51 Score=44.64 Aligned_cols=37 Identities=19% Similarity=0.296 Sum_probs=31.9
Q ss_pred cccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcccc
Q 011476 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL 273 (485)
Q Consensus 223 ~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~l 273 (485)
..+|.|||+|..|..+|..++.. |.+|++++..+..+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~--------------G~~V~l~D~~~~~l 42 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG--------------GFRVKLYDIEPRQI 42 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSCHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhC--------------CCeEEEEECCHHHH
Confidence 35899999999999999999986 79999999877544
No 482
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=88.34 E-value=0.35 Score=45.37 Aligned_cols=34 Identities=15% Similarity=0.307 Sum_probs=30.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCC-cEEEEcCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPR 90 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~-~V~lie~~ 90 (485)
..++++|||+|.+|.++|..|...|. +|+|+++.
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 35799999999999999999999998 89999876
No 483
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=88.27 E-value=0.29 Score=45.30 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=30.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
..++++|+|+|-+|.++|..|...|.+|+++++.
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 3578999999999999999999999999999876
No 484
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=88.24 E-value=0.59 Score=43.75 Aligned_cols=34 Identities=18% Similarity=0.338 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCcc
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~ 271 (485)
++|.|||.|..|.-+|..|.+. |.+|+++++.+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~--------------G~~V~~~dr~~~ 49 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW--------------PGGVTVYDIRIE 49 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS--------------TTCEEEECSSTT
T ss_pred CeEEEECcCHHHHHHHHHHHHC--------------CCeEEEEeCCHH
Confidence 4899999999999999999885 689999988764
No 485
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.14 E-value=0.28 Score=47.63 Aligned_cols=33 Identities=27% Similarity=0.303 Sum_probs=30.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
+++|+|+|+|..|..+|..|...|++|+++|++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 479999999999999999999999999999975
No 486
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=88.09 E-value=0.26 Score=46.83 Aligned_cols=34 Identities=21% Similarity=0.406 Sum_probs=30.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCC-cEEEEcCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~g~-~V~lie~~~ 91 (485)
+.+|.|||+|..|.+.|..|+..|+ +|+++|..+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4689999999999999999998888 999999764
No 487
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=88.01 E-value=0.44 Score=48.14 Aligned_cols=36 Identities=33% Similarity=0.479 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCccc
Q 011476 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (485)
Q Consensus 224 ~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~~~ 272 (485)
.+|+|||||++|+-+|..|.+.+ +.+|+|+++++++
T Consensus 10 ~~v~iiG~G~~Gl~~A~~l~~~g-------------~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 10 PKIVIIGAGPTGLGAAVRLTELG-------------YKNWHLYECNDTP 45 (484)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-------------CCSEEEEESSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHcC-------------CCCEEEEeCCCCC
Confidence 48999999999999999999862 2689999988754
No 488
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=88.00 E-value=0.29 Score=46.02 Aligned_cols=34 Identities=12% Similarity=0.061 Sum_probs=30.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
++++|.|||.|.-|...|..|...|++|++++++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 3468999999999999999999999999999976
No 489
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=87.99 E-value=0.29 Score=46.85 Aligned_cols=35 Identities=29% Similarity=0.369 Sum_probs=31.0
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 56 ~~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
.++.+|.|||+|.-|.+.|..|.+.|++|+++++.
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 34679999999999999999999999999999975
No 490
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=87.87 E-value=0.28 Score=43.58 Aligned_cols=34 Identities=29% Similarity=0.320 Sum_probs=29.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
..++|.|||+|..|.+.|..|...|++|++++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3468999999999999999999889999999875
No 491
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=87.76 E-value=0.29 Score=45.64 Aligned_cols=33 Identities=24% Similarity=0.378 Sum_probs=30.6
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
++|.|||.|..|...|..|...|++|+++++++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 589999999999999999999999999999763
No 492
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=87.76 E-value=0.3 Score=49.08 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=32.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC-CC-cEEEEcCCCC
Q 011476 58 KKKVVVLGTGWAGTSFLKNLNNP-SY-DVQVISPRNY 92 (485)
Q Consensus 58 ~~~vvIIG~G~aGl~aA~~L~~~-g~-~V~lie~~~~ 92 (485)
.++|.|||+|.-|+..|..|+.. |+ +|+++|.++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 46899999999999999999999 99 9999998754
No 493
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.72 E-value=0.73 Score=39.48 Aligned_cols=35 Identities=20% Similarity=0.146 Sum_probs=29.4
Q ss_pred cccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCc
Q 011476 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (485)
Q Consensus 223 ~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~ 270 (485)
+.+++|+|.|.+|..+|..|.+.. |.+|+++++.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~-------------g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARY-------------GKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHH-------------CSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhcc-------------CCeEEEEECCH
Confidence 458999999999999999998751 47899998764
No 494
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.66 E-value=0.32 Score=47.45 Aligned_cols=34 Identities=29% Similarity=0.345 Sum_probs=31.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
.+++|+|||+|..|..+|..+...|.+|+++|+.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4679999999999999999999999999999976
No 495
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=87.53 E-value=0.47 Score=38.54 Aligned_cols=34 Identities=21% Similarity=0.400 Sum_probs=29.2
Q ss_pred cccEEEECCChhHHHHHHHHHHhhHHHHHhhCcCCCCCceEEEEecCc
Q 011476 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (485)
Q Consensus 223 ~~~vvVVGgG~~g~e~A~~l~~~~~~~~~~~~p~~~~g~~Vtlv~~~~ 270 (485)
.++++|+|+|.+|..++..|.+. |.+|+++++.+
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~--------------g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRM--------------GHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--------------TCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHC--------------CCEEEEEeCCH
Confidence 35899999999999999999886 67899998753
No 496
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=87.49 E-value=0.31 Score=45.90 Aligned_cols=32 Identities=25% Similarity=0.341 Sum_probs=29.4
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCC--cEEEEcCC
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPR 90 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~g~--~V~lie~~ 90 (485)
++|+|||+|..|.+.|..|+..|+ +|+++|.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 379999999999999999998888 99999976
No 497
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=87.46 E-value=0.32 Score=46.17 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=29.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 57 ~~~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
.+++|.|||+|.-|.+.|..|++.|++|+++ ++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 4579999999999999999999999999999 55
No 498
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=87.43 E-value=0.32 Score=46.78 Aligned_cols=32 Identities=28% Similarity=0.282 Sum_probs=29.9
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCcEEEEcCC
Q 011476 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (485)
Q Consensus 59 ~~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~ 90 (485)
.+|.|||+|..|...|..|...|++|+++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 58999999999999999999999999999875
No 499
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=87.42 E-value=0.38 Score=46.57 Aligned_cols=32 Identities=31% Similarity=0.372 Sum_probs=30.0
Q ss_pred eEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 60 KVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 60 ~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
+|.|||+|.-|.+.|..|...|++|+++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999999763
No 500
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=87.40 E-value=0.45 Score=46.82 Aligned_cols=31 Identities=26% Similarity=0.385 Sum_probs=28.9
Q ss_pred eEEEECCcHHHHHHHHhcCCCCCcEEEEcCCC
Q 011476 60 KVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (485)
Q Consensus 60 ~vvIIG~G~aGl~aA~~L~~~g~~V~lie~~~ 91 (485)
+|.|||.|..|+..|..|++ |++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 79999999999999999999 99999999763
Done!