Query         011477
Match_columns 485
No_of_seqs    184 out of 1990
Neff          11.3
Searched_HMMs 46136
Date          Fri Mar 29 01:48:13 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011477.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011477hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 2.1E-86 4.7E-91  621.9  44.2  432   29-465    25-463 (489)
  2 PLN02971 tryptophan N-hydroxyl 100.0 9.5E-81 2.1E-85  608.0  46.8  451   26-477    53-535 (543)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0 1.1E-80 2.4E-85  573.6  39.7  427   31-464    32-470 (499)
  4 PLN02687 flavonoid 3'-monooxyg 100.0 1.2E-79 2.7E-84  598.5  45.3  439   23-465    27-479 (517)
  5 PLN03112 cytochrome P450 famil 100.0 3.5E-79 7.5E-84  596.7  48.1  461    4-465     6-478 (514)
  6 PLN00110 flavonoid 3',5'-hydro 100.0 7.7E-79 1.7E-83  589.1  46.4  436   27-466    28-471 (504)
  7 PLN03234 cytochrome P450 83B1; 100.0   6E-79 1.3E-83  593.3  45.3  435   27-466    25-470 (499)
  8 PLN02183 ferulate 5-hydroxylas 100.0 7.2E-79 1.6E-83  593.0  44.8  433   22-466    28-483 (516)
  9 PTZ00404 cytochrome P450; Prov 100.0   3E-78 6.5E-83  585.8  45.7  444   15-467    14-459 (482)
 10 PLN02394 trans-cinnamate 4-mon 100.0 1.6E-77 3.5E-82  583.9  45.7  432   29-466    29-474 (503)
 11 PLN02966 cytochrome P450 83A1  100.0 1.3E-77 2.7E-82  582.9  43.9  447   15-466    14-471 (502)
 12 PLN00168 Cytochrome P450; Prov 100.0 2.3E-76   5E-81  575.8  46.8  433   26-466    31-491 (519)
 13 PLN02290 cytokinin trans-hydro 100.0 4.8E-76   1E-80  574.9  37.8  421   30-465    42-490 (516)
 14 PLN02655 ent-kaurene oxidase   100.0 3.5E-75 7.5E-80  560.5  41.8  429   32-466     1-439 (466)
 15 PLN03018 homomethionine N-hydr 100.0 4.9E-74 1.1E-78  556.2  47.7  451   14-465    21-497 (534)
 16 PLN02500 cytochrome P450 90B1  100.0 2.9E-75 6.3E-80  565.1  38.8  415   23-467    31-469 (490)
 17 PLN02774 brassinosteroid-6-oxi 100.0 1.7E-74 3.6E-79  555.3  40.0  413   26-467    27-443 (463)
 18 KOG0157 Cytochrome P450 CYP4/C 100.0 1.4E-74 3.1E-79  554.3  34.2  422   28-466    33-472 (497)
 19 KOG0159 Cytochrome P450 CYP11/ 100.0 9.9E-74 2.2E-78  514.5  35.2  427   30-467    50-495 (519)
 20 PF00067 p450:  Cytochrome P450 100.0   4E-75 8.8E-80  567.0  27.4  430   32-468     1-443 (463)
 21 PLN02196 abscisic acid 8'-hydr 100.0 5.8E-73 1.3E-77  544.0  38.0  438    5-477    10-454 (463)
 22 PLN03195 fatty acid omega-hydr 100.0 5.4E-73 1.2E-77  552.8  38.1  424   32-467    32-493 (516)
 23 PLN02169 fatty acid (omega-1)- 100.0 1.2E-72 2.5E-77  544.9  39.0  417   32-466    33-476 (500)
 24 PLN02987 Cytochrome P450, fami 100.0 4.4E-71 9.4E-76  528.8  41.9  437    1-468     1-449 (472)
 25 PLN03141 3-epi-6-deoxocathaste 100.0 1.4E-71   3E-76  533.9  38.2  409   27-466     4-429 (452)
 26 PLN02738 carotene beta-ring hy 100.0 3.4E-71 7.3E-76  541.7  40.3  411   41-465   142-569 (633)
 27 KOG0684 Cytochrome P450 [Secon 100.0 1.6E-71 3.5E-76  487.4  33.5  417   30-466    32-460 (486)
 28 PLN02302 ent-kaurenoic acid ox 100.0 1.4E-70 3.1E-75  535.0  43.2  411   27-466    39-465 (490)
 29 PLN02936 epsilon-ring hydroxyl 100.0 3.8E-69 8.3E-74  520.7  37.7  420   31-466    13-458 (489)
 30 PLN02426 cytochrome P450, fami 100.0 1.1E-67 2.4E-72  509.3  38.7  413   37-465    48-473 (502)
 31 PLN02648 allene oxide synthase 100.0 8.6E-63 1.9E-67  467.6  27.5  409   28-466    15-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 4.3E-56 9.2E-61  417.4  31.2  359   52-465    25-387 (411)
 33 PHA02681 ORF089 virion membran  64.8      42 0.00092   22.9   5.9   21    4-24      7-27  (92)
 34 PF12554 MOZART1:  Mitotic-spin  63.1      31 0.00067   21.1   4.7   43  288-330     5-47  (48)
 35 PF08492 SRP72:  SRP72 RNA-bind  60.3     6.8 0.00015   25.2   1.7    9  411-419    44-52  (59)
 36 PHA03049 IMV membrane protein;  59.6      26 0.00057   22.8   4.1   23    3-25      5-27  (68)
 37 PF05952 ComX:  Bacillus compet  58.6      11 0.00023   24.0   2.3   24  311-334     4-27  (57)
 38 PF12508 DUF3714:  Protein of u  55.0     2.8 6.1E-05   34.9  -0.9   44  347-392    51-94  (200)
 39 PF05961 Chordopox_A13L:  Chord  54.6      35 0.00075   22.4   4.1   24    3-26      5-28  (68)
 40 PRK06789 flagellar motor switc  50.9      18 0.00039   24.6   2.6   40  354-393    21-62  (74)
 41 PF05393 Hum_adeno_E3A:  Human   44.3      47   0.001   23.1   3.7    6   37-42     66-71  (94)
 42 PHA02902 putative IMV membrane  44.3      62  0.0013   21.0   4.0   22    4-25      7-28  (70)
 43 KOG0114 Predicted RNA-binding   43.4 1.3E+02  0.0028   22.1   6.1   59   30-90     12-76  (124)
 44 PRK11875 psbT photosystem II r  43.1      55  0.0012   17.7   3.4   20    1-20      1-20  (31)
 45 PF07886 BA14K:  BA14K-like pro  42.9      22 0.00048   19.4   1.7   16  423-438    16-31  (31)
 46 CHL00031 psbT photosystem II p  41.8      58  0.0012   17.9   3.1   20    1-20      1-20  (33)
 47 PRK14740 kdbF potassium-transp  41.0      45 0.00097   17.6   2.5   12   10-21     13-24  (29)
 48 PF09201 SRX:  SRX;  InterPro:   39.4      25 0.00055   27.0   2.1   22  436-457    19-40  (148)
 49 PF01405 PsbT:  Photosystem II   39.3      63  0.0014   17.2   3.3   21    1-21      1-21  (29)
 50 PF14129 DUF4296:  Domain of un  38.4 1.3E+02  0.0028   21.2   5.5   49  286-334    30-78  (87)
 51 PF15206 FAM209:  FAM209 family  38.1      23  0.0005   27.1   1.7   30   12-41     48-77  (150)
 52 KOG3506 40S ribosomal protein   37.7      15 0.00032   22.9   0.6   11  428-438    12-22  (56)
 53 PF12444 Sox_N:  Sox developmen  37.4      24 0.00051   24.7   1.6   19  446-464    61-79  (84)
 54 PF12273 RCR:  Chitin synthesis  34.1      27 0.00058   27.0   1.7   19   12-30     11-29  (130)
 55 PF13893 RRM_5:  RNA recognitio  34.0 1.2E+02  0.0026   18.8   5.0   35   56-90      2-40  (56)
 56 TIGR03779 Bac_Flav_CT_M Bacter  33.7     8.2 0.00018   36.2  -1.4   44  347-392   254-297 (410)
 57 PF04798 Baculo_19:  Baculoviru  32.9      10 0.00022   29.4  -0.8   23  422-445    55-77  (146)
 58 COG0851 MinE Septum formation   30.3      85  0.0019   22.1   3.3   18  319-336    35-52  (88)
 59 PF13625 Helicase_C_3:  Helicas  29.1 1.2E+02  0.0026   23.3   4.6   39   52-92     77-115 (129)
 60 PRK05933 type III secretion sy  27.6      61  0.0013   29.2   2.8   43  351-393   317-362 (372)
 61 KOG3653 Transforming growth fa  27.4 2.4E+02  0.0053   27.3   6.7   24   52-75    212-236 (534)
 62 PF14483 Cut8_M:  Cut8 dimerisa  26.9 1.1E+02  0.0024   17.6   2.9   16  313-328    19-35  (38)
 63 PRK09919 anti-adapter protein   25.0      25 0.00055   26.1   0.1   38  380-417    35-76  (114)
 64 PHA03162 hypothetical protein;  24.6      56  0.0012   24.9   1.8   24  431-454     2-25  (135)
 65 PF05524 PEP-utilisers_N:  PEP-  24.3 3.2E+02  0.0069   20.7   7.9   69  240-316    39-107 (123)
 66 cd08318 Death_NMPP84 Death dom  24.0 2.6E+02  0.0057   19.6   5.4   42  119-163    17-61  (86)
 67 PF15300 INT_SG_DDX_CT_C:  INTS  24.0      45 0.00098   22.0   1.1   14  348-361    40-53  (65)
 68 PF11227 DUF3025:  Protein of u  22.8      48   0.001   27.9   1.3   19  396-414   193-211 (212)
 69 PRK14750 kdpF potassium-transp  22.6 1.4E+02   0.003   15.9   3.1    9   12-20     15-23  (29)
 70 COG4471 Uncharacterized protei  20.7 2.7E+02   0.006   19.7   4.3   36   55-90     18-53  (90)
 71 cd00652 TBP_TLF TATA box bindi  20.6 1.2E+02  0.0025   25.0   3.1   54  408-462    29-87  (174)
 72 COG1886 FliN Flagellar motor s  20.6   1E+02  0.0023   24.0   2.7   41  353-393    84-126 (136)
 73 PRK13467 F0F1 ATP synthase sub  20.3 1.6E+02  0.0034   19.6   3.0   24  306-329    20-43  (66)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.1e-86  Score=621.87  Aligned_cols=432  Identities=39%  Similarity=0.680  Sum_probs=385.1

Q ss_pred             CCCCCCCCCCCeeecccCCCCC-chHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHhCCcccCCCCC-Cccccc
Q 011477           29 KNLPPSPPSLPIIGHFHLLKMP-MSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPL-LPSRGQ  106 (485)
Q Consensus        29 ~~~ppgp~~~p~~G~~~~~~~~-~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~~-~~~~~~  106 (485)
                      .+.||||+++|++||+.+++.. .++.+.++.++|||++++|+|+.++|||+|++.++|++.+++..|.+||. ......
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~  104 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY  104 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence            6899999999999999999665 89999999999999999999999999999999999999999999999997 223345


Q ss_pred             cccccccccccCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHH
Q 011477          107 EKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSFKDVQKVDVKSLLYKLDFNIVIRM  186 (485)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vd~~~~~~~~~~~~i~~~  186 (485)
                      ...+..+.+++.+|+.|+.+||.....+++...++.......++++.+++.+.+ ...+ ++||+...+..+++++|+++
T Consensus       105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~-~~vdl~~~l~~~~~nvI~~~  182 (489)
T KOG0156|consen  105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKG-EPVDLSELLDLLVGNVICRM  182 (489)
T ss_pred             hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCC-ceeeHHHHHHHHHHHHHHHH
Confidence            554545677787999999999999888999999999988889999999999987 3333 79999999999999999999


Q ss_pred             HhcCccCcccccchhHHHHHHHHHHhhhccccCCCcccccc-cccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHhhc-
Q 011477          187 VAGKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFP-FLRWFT-FYGAEQKIRKLRRKRDDFAQALLDEQRKAD-  263 (485)
Q Consensus       187 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-  263 (485)
                      +||.++...+   .+...++.+.+.+.....+...+.+++| ++.++. ..+..+.......++..+.++.++++++.. 
T Consensus       183 ~fG~rf~~~~---~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~~  259 (489)
T KOG0156|consen  183 LFGRRFEEED---EEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKIG  259 (489)
T ss_pred             HhCCccccCC---chHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            9999996642   4555667777888887777777888899 676665 224667777777779999999999987741 


Q ss_pred             CCCCCcHHHHHhcccccCCCC-CCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCCCCc
Q 011477          264 RKIVPTLIDSLLKLQESEPEF-YNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDKHVGLSRLIED  342 (485)
Q Consensus       264 ~~~~~dll~~ll~~~~~~~~~-l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~~~~~~~~~~~  342 (485)
                      .++..|+++.+++..+++... ++++++...+.++++||+|||++|+.|++.+|+.||++|+|+++||++++|.++.++.
T Consensus       260 ~~~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e  339 (489)
T KOG0156|consen  260 DEEGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSE  339 (489)
T ss_pred             cCCCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCh
Confidence            123389999999987654433 8999999999999999999999999999999999999999999999999998877999


Q ss_pred             ccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhhccCCCCCCCCCCCCCCCccCcc-cc
Q 011477          343 ADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSVHMDPELWEDPDKFKPERFLMCE-EE  421 (485)
Q Consensus       343 ~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~Rf~~~~-~~  421 (485)
                      +|+.+||||+|||+||+|+||++|...||.+++|+.++||.|||||.|+++.|++||||++|+||++|+||||++++ .+
T Consensus       340 ~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~d~~  419 (489)
T KOG0156|consen  340 SDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSNDGK  419 (489)
T ss_pred             hhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999984 44


Q ss_pred             cCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCC
Q 011477          422 QVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEE  465 (485)
Q Consensus       422 ~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~  465 (485)
                      .....++|||.|+|.|||..+|.+++.+++++|+++|+|+++++
T Consensus       420 ~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~  463 (489)
T KOG0156|consen  420 GLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG  463 (489)
T ss_pred             CCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC
Confidence            47899999999999999999999999999999999999999977


No 2  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=9.5e-81  Score=607.97  Aligned_cols=451  Identities=26%  Similarity=0.507  Sum_probs=358.0

Q ss_pred             CCCCCCCCCCCCCCeeecccCCC--CCchHHHHHHHhhhC-CeEEEEecCccEEEecchHHHHHHHHhCCcccCCCCCCc
Q 011477           26 IQPKNLPPSPPSLPIIGHFHLLK--MPMSQTLTNLCNKYG-PILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLP  102 (485)
Q Consensus        26 ~~~~~~ppgp~~~p~~G~~~~~~--~~~~~~~~~~~~kyG-~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~~~~  102 (485)
                      +++.+.||||+++|++||+.++.  ...+.++.+++++|| +++++++|+.++++|+||+.+++++.+++..|.+++...
T Consensus        53 ~r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~  132 (543)
T PLN02971         53 KKLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY  132 (543)
T ss_pred             CCCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence            34557899999999999998873  233678999999999 899999999999999999999999999888888887544


Q ss_pred             cccccccccccccccCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHH
Q 011477          103 SRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSFKDVQKVDVKSLLYKLDFNI  182 (485)
Q Consensus       103 ~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vd~~~~~~~~~~~~  182 (485)
                      .....+.+..++++..+|+.|+++|+.+..+++++...+.+.+.+.++++.+.+.+.+....+ +++|+.+.+.++++++
T Consensus       133 ~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~vd~~~~~~~~t~~v  211 (543)
T PLN02971        133 AQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNS-EPVDLRFVTRHYCGNA  211 (543)
T ss_pred             chhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CceehHHHHHHHHHHH
Confidence            433333332345778889999999999986778777777888888888888888776544333 5799999999999999


Q ss_pred             HHHHHhcCccCccccc-chhHHHHHHHHHHhhhccc---cCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 011477          183 VIRMVAGKRCFEEDEM-NTDIAKDKLDELNQTFTPL---MPTALGDYFPFLRWFTFYGAEQKIRKLRRKRDDFAQALLDE  258 (485)
Q Consensus       183 i~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  258 (485)
                      +++++||.++...... ..+...+..+.++..+...   ....+.+++|++++++..+..+...+..+.+.+++.+.+++
T Consensus       212 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  291 (543)
T PLN02971        212 IKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDE  291 (543)
T ss_pred             HHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999987322100 0001111222222222211   11123455676655432233344555667778888888877


Q ss_pred             HHhh---c-CCCCCcHHHHHhcccccCCC-CCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHh
Q 011477          259 QRKA---D-RKIVPTLIDSLLKLQESEPE-FYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDKH  333 (485)
Q Consensus       259 ~~~~---~-~~~~~dll~~ll~~~~~~~~-~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~~  333 (485)
                      +++.   + .....|+++.+++..+.++. .++++++.+++.++++||+|||+++++|++++|+.||++|+|+++||+++
T Consensus       292 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v  371 (543)
T PLN02971        292 RIKMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRV  371 (543)
T ss_pred             HHHHHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            6542   1 12346999999986543333 49999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhhccCCCCCCCCCCCCCC
Q 011477          334 VGLSRLIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSVHMDPELWEDPDKFKPE  413 (485)
Q Consensus       334 ~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~  413 (485)
                      ++.+..++.+++++|||++|||+|+||++|+++...+|.+.+|++++||.|||||.|+++.|++||||++|+||++|+||
T Consensus       372 ~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~Pe  451 (543)
T PLN02971        372 VGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPE  451 (543)
T ss_pred             hCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcc
Confidence            98777899999999999999999999999999987789999999999999999999999999999999999999999999


Q ss_pred             CccCcccc----cCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCC----------------CeeEEee
Q 011477          414 RFLMCEEE----QVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEER----------------PFKIIFR  473 (485)
Q Consensus       414 Rf~~~~~~----~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~----------------~~~~~~~  473 (485)
                      ||++++..    ..+..|+|||+|+|.|+|++||+.|+++++|+|+++|+|++.++.                ++++.+.
T Consensus       452 Rfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  531 (543)
T PLN02971        452 RHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSHDMFLSKPLVMVGE  531 (543)
T ss_pred             cCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcCcccccccceeeee
Confidence            99975421    245689999999999999999999999999999999999987654                4567777


Q ss_pred             cCcc
Q 011477          474 PREK  477 (485)
Q Consensus       474 ~r~~  477 (485)
                      ||..
T Consensus       532 ~~~~  535 (543)
T PLN02971        532 LRLS  535 (543)
T ss_pred             ecCC
Confidence            7743


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.1e-80  Score=573.56  Aligned_cols=427  Identities=25%  Similarity=0.351  Sum_probs=341.1

Q ss_pred             CCCCCCCCCeeecccCCC--CCchHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHhCCcccCCCCCCccccccc
Q 011477           31 LPPSPPSLPIIGHFHLLK--MPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEK  108 (485)
Q Consensus        31 ~ppgp~~~p~~G~~~~~~--~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~  108 (485)
                      -+|+|+++|++||+..+.  +.......+...+||+++.++.+.++.++|+|||+|++|+.++.+.|.++. ........
T Consensus        32 Gi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~-~~~~~d~~  110 (499)
T KOG0158|consen   32 GIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRK-RPIYGDPE  110 (499)
T ss_pred             CCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCC-CCCcCCCC
Confidence            458899999999999882  222444455555559999999999999999999999999999988888844 22211111


Q ss_pred             -cccccccccCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHH
Q 011477          109 -EKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSFKDVQKVDVKSLLYKLDFNIVIRMV  187 (485)
Q Consensus       109 -~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vd~~~~~~~~~~~~i~~~~  187 (485)
                       ......++..+|+.||++|..++ |.|++.+++.+.+.+.+.++++++.+.++...+ ..+++.+.+..+|.|||++++
T Consensus       111 ~~l~~~~Lf~~~g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~-~~~~~~dl~~~yT~DVI~~~A  188 (499)
T KOG0158|consen  111 DPLSALNLFFLRGERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGG-QEGEIKDLCARYTTDVIGSCA  188 (499)
T ss_pred             CcccccCchhccCchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhccc-CCccHHHHHHHHHHHHHhHhh
Confidence             11124678889999999999999 899999999999999999999999999876544 578999999999999999999


Q ss_pred             hcCccCcccccchhHHHHHHHHHHhhhccccC-CCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 011477          188 AGKRCFEEDEMNTDIAKDKLDELNQTFTPLMP-TALGDYFPFLRWFTFYGAEQKIRKLRRKRDDFAQALLDEQRKADRKI  266 (485)
Q Consensus       188 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  266 (485)
                      ||.+.++..+............+......... ......+|.+....  .......+..+.+.+.+...++.|..+ ...
T Consensus       189 fG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l--~~~~~~~~~~~~~~~~v~~~v~~R~~~-~~~  265 (499)
T KOG0158|consen  189 FGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL--RVKLFPEDVTDFFRKLVNSRVEQREKE-NIE  265 (499)
T ss_pred             cccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh--hcccChHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence            99999776432222221111222110111000 11122233332110  011223345556666777777777333 467


Q ss_pred             CCcHHHHHhccccc--C---CC-CCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCCC
Q 011477          267 VPTLIDSLLKLQES--E---PE-FYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDKHVGLSRLI  340 (485)
Q Consensus       267 ~~dll~~ll~~~~~--~---~~-~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~~~~~~~~~  340 (485)
                      ++|+++.++++..+  .   .. .+|.+|++++++.+++||.||||++++.++|+||+||++|+|||+||+++......+
T Consensus       266 r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~l  345 (499)
T KOG0158|consen  266 RNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGL  345 (499)
T ss_pred             CchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCC
Confidence            88999999998753  1   11 499999999999999999999999999999999999999999999999997654449


Q ss_pred             CcccccCCchHHHHHHHHhccccCcccCCCCCCCCccccc-ceeeCCCCEEEeechhhccCCCCCCCCCCCCCCCccCcc
Q 011477          341 EDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVG-GYHVPGGTQLLINVWSVHMDPELWEDPDKFKPERFLMCE  419 (485)
Q Consensus       341 ~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~-g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~Rf~~~~  419 (485)
                      +++.+++|+||++||+||||+||+++.. .|.+++|++++ |+.||||+.|.++++++||||++||||++|+||||.+++
T Consensus       346 tyd~l~~L~YLd~Vi~ETLR~yP~~~~~-~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~  424 (499)
T KOG0158|consen  346 TYDSLSKLKYLDMVIKETLRLYPPAPFL-NRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEEN  424 (499)
T ss_pred             CHHHHhCCcHHHHHHHHHHhhCCCcccc-cceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCc
Confidence            9999999999999999999999999995 59999999999 999999999999999999999999999999999999877


Q ss_pred             c-ccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecC
Q 011477          420 E-EQVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAE  464 (485)
Q Consensus       420 ~-~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~  464 (485)
                      . ..++.+|+|||.|||+|+|++||.+|+|+.+++||++|+++..+
T Consensus       425 ~~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~  470 (499)
T KOG0158|consen  425 NKSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCP  470 (499)
T ss_pred             ccccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCC
Confidence            5 56789999999999999999999999999999999999999888


No 4  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.2e-79  Score=598.46  Aligned_cols=439  Identities=32%  Similarity=0.604  Sum_probs=361.6

Q ss_pred             hcCCCCCCCCCCCCCCCeeecccCCCCCchHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHhCCcccCCCCCCc
Q 011477           23 RNKIQPKNLPPSPPSLPIIGHFHLLKMPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLP  102 (485)
Q Consensus        23 ~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~~~~  102 (485)
                      +.+.+..+.||||.++|++||+..+..++..++.+|+++||++|++++|+.++++++||+++++++.++...|.+++...
T Consensus        27 ~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~  106 (517)
T PLN02687         27 GSGKHKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNS  106 (517)
T ss_pred             cCCCCCCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCcc
Confidence            33344556789999999999998887667899999999999999999999999999999999999998777787776543


Q ss_pred             cccccccccccccccCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHH
Q 011477          103 SRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSFKDVQKVDVKSLLYKLDFNI  182 (485)
Q Consensus       103 ~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vd~~~~~~~~~~~~  182 (485)
                      ..........+++++.+|+.|+++|+.++.++|+.++++.+.+.+.++++.+++.+.... ++ +++|+.+.+..+++|+
T Consensus       107 ~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~~-~~vd~~~~~~~~t~dv  184 (517)
T PLN02687        107 GAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH-GT-APVNLGQLVNVCTTNA  184 (517)
T ss_pred             chhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc-CC-CceeHHHHHHHHHHHH
Confidence            322222222345777789999999999985689999999999999999999999997643 22 6899999999999999


Q ss_pred             HHHHHhcCccCcccccchhHHHHHHHHHHhhhccccCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011477          183 VIRMVAGKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFPFLRWFTFYGAEQKIRKLRRKRDDFAQALLDEQRKA  262 (485)
Q Consensus       183 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  262 (485)
                      ++.++||.++...+.  ......+.+.+...+...........+|++.++......++..+..+.+.+++.+.++++++.
T Consensus       185 i~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~  262 (517)
T PLN02687        185 LGRAMVGRRVFAGDG--DEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAA  262 (517)
T ss_pred             HHHHHhCccccccCC--cchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999754221  223344555555544332222233456765554333333456667788888888888887765


Q ss_pred             c---CCCCCcHHHHHhccccc-----CCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhc
Q 011477          263 D---RKIVPTLIDSLLKLQES-----EPEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDKHV  334 (485)
Q Consensus       263 ~---~~~~~dll~~ll~~~~~-----~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~~~  334 (485)
                      .   .+...|+++.+++..+.     .+..++++++.+++..+++||+|||+++++|++|+|++||++|+|+++|++++.
T Consensus       263 ~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~  342 (517)
T PLN02687        263 GQTGSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVV  342 (517)
T ss_pred             ccccCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHc
Confidence            2   23457999999986543     234599999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhhccCCCCCCCCCCCCCCC
Q 011477          335 GLSRLIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSVHMDPELWEDPDKFKPER  414 (485)
Q Consensus       335 ~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R  414 (485)
                      +.+..++.+++++|||++|||+||||++|+++...+|++.+|++++||.||+||.|.++.+.+||||++|+||++|||||
T Consensus       343 ~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeR  422 (517)
T PLN02687        343 GRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDR  422 (517)
T ss_pred             CCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchh
Confidence            87677899999999999999999999999999876799999999999999999999999999999999999999999999


Q ss_pred             ccCccc------ccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCC
Q 011477          415 FLMCEE------EQVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEE  465 (485)
Q Consensus       415 f~~~~~------~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~  465 (485)
                      |++.+.      ...+..|+|||+|+|.|+|++||.+|+++++|+|+++|+|++.++
T Consensus       423 fl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~  479 (517)
T PLN02687        423 FLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADG  479 (517)
T ss_pred             cCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCC
Confidence            997532      123468999999999999999999999999999999999998755


No 5  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=3.5e-79  Score=596.66  Aligned_cols=461  Identities=30%  Similarity=0.588  Sum_probs=374.4

Q ss_pred             hHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCeeecccCCCCCchHHHHHHHhhhCCeEEEEecCccEEEecchHH
Q 011477            4 LHYLGLLVSILLIVYQHIRRNKIQPKNLPPSPPSLPIIGHFHLLKMPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSA   83 (485)
Q Consensus         4 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~   83 (485)
                      +.+.+.++++.+++|.+.+++.++..+.||||+++|++||+.+++..+..++.+++++||++|++++++.+.++++||+.
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~   85 (514)
T PLN03112          6 LSLLFSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPEL   85 (514)
T ss_pred             HHHHHHHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHH
Confidence            44455555666677777777777777889999999999999988776789999999999999999999999999999999


Q ss_pred             HHHHHHhCCcccCCCCCCccccccccccccccccCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhcc
Q 011477           84 IEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSF  163 (485)
Q Consensus        84 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~  163 (485)
                      +++++.++...|.+++..........+...+++..+|+.|+.+|+.+..+.|+.++++.+.+.+.++++.+++.+.+...
T Consensus        86 ~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~  165 (514)
T PLN03112         86 IREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQ  165 (514)
T ss_pred             HHHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhc
Confidence            99999888778877665432222222223455677899999999997657899999999999999999999998765543


Q ss_pred             CCCCcccHHHHHHHHHHHHHHHHHhcCccCcccccchhHHHHHHHHHHhhhccccCCCccccccccccccccchHHHHHH
Q 011477          164 KDVQKVDVKSLLYKLDFNIVIRMVAGKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFPFLRWFTFYGAEQKIRK  243 (485)
Q Consensus       164 ~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~  243 (485)
                      ++ +.+|+.+.+.++++++++.++||.++...+....+...++.+.+...+..........++|++.++......++..+
T Consensus       166 ~~-~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  244 (514)
T PLN03112        166 TG-KPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMRE  244 (514)
T ss_pred             cC-CeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHH
Confidence            33 68999999999999999999999987433211123344566665555443322334445676554432233455667


Q ss_pred             HHHHHHHHHHHHHHHHHhhc-----CCCCCcHHHHHhcccccCCC-CCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHh
Q 011477          244 LRRKRDDFAQALLDEQRKAD-----RKIVPTLIDSLLKLQESEPE-FYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMI  317 (485)
Q Consensus       244 ~~~~~~~~~~~~i~~~~~~~-----~~~~~dll~~ll~~~~~~~~-~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~  317 (485)
                      ..+.+.+++...++++++..     .....|+++.++++.+.++. .++++++.+++..+++||+|||+++++|++|+|+
T Consensus       245 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~  324 (514)
T PLN03112        245 VEKRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVI  324 (514)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHH
Confidence            77788888888887766531     12346899999986543332 4899999999999999999999999999999999


Q ss_pred             hChHHHHHHHHHHHHhcCCCCCCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhh
Q 011477          318 THSEVFKTARDEIDKHVGLSRLIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSV  397 (485)
Q Consensus       318 ~~p~~~~klr~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~  397 (485)
                      +||++|+|+++|++++++.++.++.+++++|||++|||+||+|++|+++...+|.+.+|++++||.|||||.|.++++.+
T Consensus       325 ~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~  404 (514)
T PLN03112        325 KNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGL  404 (514)
T ss_pred             hChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHh
Confidence            99999999999999999877778999999999999999999999999998767999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCccCccc---c---cCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCC
Q 011477          398 HMDPELWEDPDKFKPERFLMCEE---E---QVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEE  465 (485)
Q Consensus       398 ~~d~~~~~~p~~F~P~Rf~~~~~---~---~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~  465 (485)
                      ||||++|+||++||||||...+.   .   ..+..|+|||+|+|+|+|++||++|+++++++|+++|+|++.++
T Consensus       405 h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~  478 (514)
T PLN03112        405 GRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDG  478 (514)
T ss_pred             hCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence            99999999999999999865321   1   23468999999999999999999999999999999999998754


No 6  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=7.7e-79  Score=589.14  Aligned_cols=436  Identities=28%  Similarity=0.556  Sum_probs=358.3

Q ss_pred             CCCCCCCCCCCCCeeecccCCCCCchHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHhCCcccCCCCCCccccc
Q 011477           27 QPKNLPPSPPSLPIIGHFHLLKMPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQ  106 (485)
Q Consensus        27 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~~~~~~~~  106 (485)
                      ...+.||||+++|++|++..++..++.++.+++++||++|++++|+.++|+++||+++++++.++...|.+++.......
T Consensus        28 ~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~  107 (504)
T PLN00110         28 PSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATH  107 (504)
T ss_pred             ccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhh
Confidence            34468999999999999988876668999999999999999999999999999999999999988777877765432222


Q ss_pred             cccccccccccCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHH
Q 011477          107 EKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSFKDVQKVDVKSLLYKLDFNIVIRM  186 (485)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vd~~~~~~~~~~~~i~~~  186 (485)
                      ...+...++++.+|+.|+++|+.++++.|+.++++.+.+.+.+++..+++.+.+...++ +.+|+.+.+..+++|+++.+
T Consensus       108 ~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g-~~~~~~~~~~~~~~~vi~~~  186 (504)
T PLN00110        108 LAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRG-EPVVVPEMLTFSMANMIGQV  186 (504)
T ss_pred             hccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCC-CcEeHHHHHHHHHHHHHHHH
Confidence            22222346777889999999999985689999999999999999999999987654444 68999999999999999999


Q ss_pred             HhcCccCcccccchhHHHHHHHHHHhhhccccCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhc--C
Q 011477          187 VAGKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFPFLRWFTFYGAEQKIRKLRRKRDDFAQALLDEQRKAD--R  264 (485)
Q Consensus       187 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~  264 (485)
                      +||.++....   .....++.+.+...+.......+...+|++.++......+...+..+.+.+++.+.++++++..  .
T Consensus       187 ~fg~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  263 (504)
T PLN00110        187 ILSRRVFETK---GSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHER  263 (504)
T ss_pred             HhCCcccccC---chhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            9999862211   1223445555554443322222334567665543223335566667778888888887766542  2


Q ss_pred             CCCCcHHHHHhccccc-CCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCCCCcc
Q 011477          265 KIVPTLIDSLLKLQES-EPEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDKHVGLSRLIEDA  343 (485)
Q Consensus       265 ~~~~dll~~ll~~~~~-~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~~~~~~~~~~~~  343 (485)
                      ....|+++.+++..+. .+..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++.+..++.+
T Consensus       264 ~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~  343 (504)
T PLN00110        264 KGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVES  343 (504)
T ss_pred             ccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHH
Confidence            2346899999976532 344699999999999999999999999999999999999999999999999999876778999


Q ss_pred             cccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhhccCCCCCCCCCCCCCCCccCccccc-
Q 011477          344 DLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSVHMDPELWEDPDKFKPERFLMCEEEQ-  422 (485)
Q Consensus       344 ~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~Rf~~~~~~~-  422 (485)
                      ++++|||++|||+||||++|+++...+|.+.+|++++||.|||||.|.++++.+|+||++|+||++|+||||++++... 
T Consensus       344 ~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~  423 (504)
T PLN00110        344 DLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKI  423 (504)
T ss_pred             HhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCccc
Confidence            9999999999999999999999987679999999999999999999999999999999999999999999999754311 


Q ss_pred             ----CCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCC
Q 011477          423 ----VGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEER  466 (485)
Q Consensus       423 ----~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~  466 (485)
                          ....|+|||+|+|.|+|++||++|+++++|+|+++|+|++.++.
T Consensus       424 ~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~  471 (504)
T PLN00110        424 DPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV  471 (504)
T ss_pred             ccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC
Confidence                13579999999999999999999999999999999999987764


No 7  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=6e-79  Score=593.32  Aligned_cols=435  Identities=29%  Similarity=0.543  Sum_probs=355.9

Q ss_pred             CCCCCCCCCCCCCeeecccCCCC-CchHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHhCCcccCCCCCCcccc
Q 011477           27 QPKNLPPSPPSLPIIGHFHLLKM-PMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRG  105 (485)
Q Consensus        27 ~~~~~ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~~~~~~~  105 (485)
                      +..+.||||+++|++||+..+.. ++..++.+++++||++|++++|+.++++++||+++++|+.++...|.+++......
T Consensus        25 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~  104 (499)
T PLN03234         25 KSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQ  104 (499)
T ss_pred             CCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhh
Confidence            34567899999999999988843 56889999999999999999999999999999999999998887888776543222


Q ss_pred             ccccccccccccCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHH
Q 011477          106 QEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSFKDVQKVDVKSLLYKLDFNIVIR  185 (485)
Q Consensus       106 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vd~~~~~~~~~~~~i~~  185 (485)
                      ..........+...++.|+++|+.+..++|+++++..+.+.+.++++.+++.+.+...++ +.+|+.+.+..+++|++++
T Consensus       105 ~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~-~~vd~~~~~~~~t~dvi~~  183 (499)
T PLN03234        105 TMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQS-GTVDLSELLLSFTNCVVCR  183 (499)
T ss_pred             hhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCC-CeEEHHHHHHHHHHHHHHH
Confidence            211111122344567899999998644799999999999999999999999997665444 6899999999999999999


Q ss_pred             HHhcCccCcccccchhHHHHHHHHHHhhhccccCCCcccccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHhh--
Q 011477          186 MVAGKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFPFLRWFT-FYGAEQKIRKLRRKRDDFAQALLDEQRKA--  262 (485)
Q Consensus       186 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--  262 (485)
                      ++||.+++..    .....++.+.+...............+|++.++. ..+..++..++.+.+.+++.+.++++.+.  
T Consensus       184 ~~fG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  259 (499)
T PLN03234        184 QAFGKRYNEY----GTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNR  259 (499)
T ss_pred             HHhCCccccc----chhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            9999988543    2234445555444433222222334456543321 12234567788888899999998887553  


Q ss_pred             cCCCCCcHHHHHhcccccCC--CCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCCC
Q 011477          263 DRKIVPTLIDSLLKLQESEP--EFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDKHVGLSRLI  340 (485)
Q Consensus       263 ~~~~~~dll~~ll~~~~~~~--~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~~~~~~~~~  340 (485)
                      ......|+++.+++..+..+  ..++++++.+++.++++||+|||+++++|++|+|++||++|+|+++|++++.++...+
T Consensus       260 ~~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~  339 (499)
T PLN03234        260 PKQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYV  339 (499)
T ss_pred             cCCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCC
Confidence            12345689999987654322  3589999999999999999999999999999999999999999999999999876778


Q ss_pred             CcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhhccCCCCC-CCCCCCCCCCccCcc
Q 011477          341 EDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSVHMDPELW-EDPDKFKPERFLMCE  419 (485)
Q Consensus       341 ~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~Rf~~~~  419 (485)
                      +.+|+++|||++|||+|+||++|+++...+|.+.+|++++||.|||||.|.++++++||||++| +||++||||||++++
T Consensus       340 ~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~  419 (499)
T PLN03234        340 SEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEH  419 (499)
T ss_pred             CHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCC
Confidence            9999999999999999999999999997679999999999999999999999999999999999 899999999999764


Q ss_pred             cc----cCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCC
Q 011477          420 EE----QVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEER  466 (485)
Q Consensus       420 ~~----~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~  466 (485)
                      ..    ..+..|+|||+|+|+|+|+++|++|+++++|+|+++|+|++.++.
T Consensus       420 ~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~  470 (499)
T PLN03234        420 KGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGI  470 (499)
T ss_pred             CCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCC
Confidence            31    236689999999999999999999999999999999999998763


No 8  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=7.2e-79  Score=592.97  Aligned_cols=433  Identities=29%  Similarity=0.561  Sum_probs=348.0

Q ss_pred             hhcCCCCCCCCCCCCCCCeeecccCCCCCchHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHhCCcccCCCCCC
Q 011477           22 RRNKIQPKNLPPSPPSLPIIGHFHLLKMPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLL  101 (485)
Q Consensus        22 ~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~~~  101 (485)
                      +++.++..+.||||+++|++|++..+....+.++.+|+++||++|++++++.++++++||+++++++.++...|..++..
T Consensus        28 ~~~~~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~  107 (516)
T PLN02183         28 ISRLRRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPAN  107 (516)
T ss_pred             HhhccCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcc
Confidence            33333345789999999999999887665578899999999999999999999999999999999999877777776654


Q ss_pred             ccccccccccccccccCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHH
Q 011477          102 PSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSFKDVQKVDVKSLLYKLDFN  181 (485)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vd~~~~~~~~~~~  181 (485)
                      ........+...++++.+|+.|+++|+.+..++|+.++++.+.+. .++++.+++.+....  + +++|+.+.+..+++|
T Consensus       108 ~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~~--~-~~v~~~~~~~~~~~~  183 (516)
T PLN02183        108 IAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSNI--G-KPVNIGELIFTLTRN  183 (516)
T ss_pred             cchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhcC--C-CcEeHHHHHHHHHHH
Confidence            332222222235677889999999999954479999999988885 567899999986422  2 689999999999999


Q ss_pred             HHHHHHhcCccCcccccchhHHHHHHHHHHhhhccccCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q 011477          182 IVIRMVAGKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFPFLRWFTFYGAEQKIRKLRRKRDDFAQALLDEQRK  261 (485)
Q Consensus       182 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (485)
                      ++++++||.+.+..       ..++.+.+...............+|++.++......++..+..+.+.+++.+.++++.+
T Consensus       184 vi~~~~fG~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  256 (516)
T PLN02183        184 ITYRAAFGSSSNEG-------QDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQ  256 (516)
T ss_pred             HHHhHhhcCcccch-------HHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999876331       12344444433332222223445676654422223345666677777777777766543


Q ss_pred             h---c------CCCCCcHHHHHhcccccC-----------CCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChH
Q 011477          262 A---D------RKIVPTLIDSLLKLQESE-----------PEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSE  321 (485)
Q Consensus       262 ~---~------~~~~~dll~~ll~~~~~~-----------~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~  321 (485)
                      .   .      .+...|+++.+++..+..           +..++++++..++.++++||+|||+++++|++|+|++||+
T Consensus       257 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pe  336 (516)
T PLN02183        257 KRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPE  336 (516)
T ss_pred             hhcccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHH
Confidence            2   1      112458999999754321           2248999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhhccCC
Q 011477          322 VFKTARDEIDKHVGLSRLIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSVHMDP  401 (485)
Q Consensus       322 ~~~klr~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d~  401 (485)
                      +|+|+++|++++++.+..++.+++++|||++|||+||||++|+++... |.+.+|++++||.|||||.|.++.+++||||
T Consensus       337 vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~-r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~  415 (516)
T PLN02183        337 DLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLL-HETAEDAEVAGYFIPKRSRVMINAWAIGRDK  415 (516)
T ss_pred             HHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCcccee-eeccCceeECCEEECCCCEEEEehhhhcCCc
Confidence            999999999999986667899999999999999999999999999985 9999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCccCcccc---cCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCC
Q 011477          402 ELWEDPDKFKPERFLMCEEE---QVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEER  466 (485)
Q Consensus       402 ~~~~~p~~F~P~Rf~~~~~~---~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~  466 (485)
                      ++|+||++|+||||++++..   ..+..|+|||+|+|+|+|++||++|+++++|+|+++|++++.++.
T Consensus       416 ~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~  483 (516)
T PLN02183        416 NSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGM  483 (516)
T ss_pred             cccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCC
Confidence            99999999999999975431   245689999999999999999999999999999999999987764


No 9  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=3e-78  Score=585.84  Aligned_cols=444  Identities=23%  Similarity=0.352  Sum_probs=352.9

Q ss_pred             HHHHHHHhhcCCCCCCCCCCCCCCCeeecccCCCCCchHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHhCCcc
Q 011477           15 LIVYQHIRRNKIQPKNLPPSPPSLPIIGHFHLLKMPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDII   94 (485)
Q Consensus        15 ~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~   94 (485)
                      +++...+.+..+...+.+|||+++|++||+..+...++..+.+++++||++|++++|+.++++++||+++++++.++...
T Consensus        14 ~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~   93 (482)
T PTZ00404         14 YIIHNAYKKYKKIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDN   93 (482)
T ss_pred             HHHHHHHHHhhhccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchh
Confidence            33334444444455677899999999999988876778999999999999999999999999999999999999987666


Q ss_pred             cCCCCCCccccccccccccccccCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCcccHHHH
Q 011477           95 FANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSFKDVQKVDVKSL  174 (485)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vd~~~~  174 (485)
                      |.+++.........  ...++++.+|+.|+++|+.++ +.|+.++++.+.+.+.+.++.+++.+.+...++ +.+|+.++
T Consensus        94 ~~~r~~~~~~~~~~--~~~~l~~~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~-~~vd~~~~  169 (482)
T PTZ00404         94 FSDRPKIPSIKHGT--FYHGIVTSSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKIESSG-ETFEPRYY  169 (482)
T ss_pred             hcCCCCcceeeeec--cCCceeccChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHHHhcC-CccCHHHH
Confidence            76665443321111  124566779999999999999 899999999999999999999999997644333 57999999


Q ss_pred             HHHHHHHHHHHHHhcCccCcccccchhHHHHHHHHHHhhhccccCCCccccccccccccccchHHHHHHHHHHHHHHHHH
Q 011477          175 LYKLDFNIVIRMVAGKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFPFLRWFTFYGAEQKIRKLRRKRDDFAQA  254 (485)
Q Consensus       175 ~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~  254 (485)
                      +.++++|+++.++||.+++..+....+...++.+.+...+.......+...++++.... ........+..+.+.+++.+
T Consensus       170 ~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  248 (482)
T PTZ00404        170 LTKFTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY-YQYLEHTDKNFKKIKKFIKE  248 (482)
T ss_pred             HHHHHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhh-HHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998754321111223455555555544333222222333322111 11112334556677777777


Q ss_pred             HHHHHHhh-cCCCCCcHHHHHhcccccCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHh
Q 011477          255 LLDEQRKA-DRKIVPTLIDSLLKLQESEPEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDKH  333 (485)
Q Consensus       255 ~i~~~~~~-~~~~~~dll~~ll~~~~~~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~~  333 (485)
                      .++++++. +.+...|+++.++++.++.. ..+.+++++++..+++||+|||+++++|++|+|++||++|+||++|++++
T Consensus       249 ~i~~~~~~~~~~~~~dll~~ll~~~~~~~-~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v  327 (482)
T PTZ00404        249 KYHEHLKTIDPEVPRDLLDLLIKEYGTNT-DDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKST  327 (482)
T ss_pred             HHHHHHHccCCCCcccHHHHHHHHhccCC-cccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence            77766554 22345799999998753211 12334588999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccc-cceeeCCCCEEEeechhhccCCCCCCCCCCCCC
Q 011477          334 VGLSRLIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTV-GGYHVPGGTQLLINVWSVHMDPELWEDPDKFKP  412 (485)
Q Consensus       334 ~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~-~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~F~P  412 (485)
                      ++.+..++.+++++|||++|||+||||++|+++...+|.+.+|+++ +||.||||+.|.++.+++||||++||||++|||
T Consensus       328 ~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~P  407 (482)
T PTZ00404        328 VNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDP  407 (482)
T ss_pred             hcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCc
Confidence            9876678999999999999999999999999997667999999999 999999999999999999999999999999999


Q ss_pred             CCccCcccccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCCC
Q 011477          413 ERFLMCEEEQVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEERP  467 (485)
Q Consensus       413 ~Rf~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~  467 (485)
                      |||++.+   .+..|+|||+|+|+|+|++||++|++++++.|+++|+|+..++++
T Consensus       408 eRwl~~~---~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~  459 (482)
T PTZ00404        408 SRFLNPD---SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKK  459 (482)
T ss_pred             cccCCCC---CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCC
Confidence            9999753   467999999999999999999999999999999999999876653


No 10 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=1.6e-77  Score=583.86  Aligned_cols=432  Identities=29%  Similarity=0.518  Sum_probs=337.1

Q ss_pred             CCCCCCCCCCCeeecccCCCCC-chHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHhCCcccCCCCCCcccccc
Q 011477           29 KNLPPSPPSLPIIGHFHLLKMP-MSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQE  107 (485)
Q Consensus        29 ~~~ppgp~~~p~~G~~~~~~~~-~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~~~~~~~~~  107 (485)
                      .+.||||+++|++|++..+..+ .+..+.+|+++||++|++++|+.++|+++||+.+++++.++...|.+++........
T Consensus        29 ~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~~~  108 (503)
T PLN02394         29 LKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIF  108 (503)
T ss_pred             CCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHhHh
Confidence            3578999999999999888544 468999999999999999999999999999999999998877677766544332322


Q ss_pred             ccccccccccCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHH
Q 011477          108 KEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSFKDVQKVDVKSLLYKLDFNIVIRMV  187 (485)
Q Consensus       108 ~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vd~~~~~~~~~~~~i~~~~  187 (485)
                      .+...+++++.+|+.|+++|+.+..+.|++++++.+.+.+.++++.+++.+.+.....++.+|+.+.+..+++|++++++
T Consensus       109 ~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~~~  188 (503)
T PLN02394        109 TGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYRMM  188 (503)
T ss_pred             ccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHHHH
Confidence            22222456777899999999999768999999999999999999999999976543222469999999999999999999


Q ss_pred             hcCccCcccccchhHHHHHHHHHHhhhccccC--CCccccccccccccccchHHHHHHHHHHHHH-HHHHHHHHHHhh--
Q 011477          188 AGKRCFEEDEMNTDIAKDKLDELNQTFTPLMP--TALGDYFPFLRWFTFYGAEQKIRKLRRKRDD-FAQALLDEQRKA--  262 (485)
Q Consensus       188 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~--  262 (485)
                      ||.+++..+   ......+.............  ..+...+|++.+.. ....+......+.... +....++++++.  
T Consensus       189 fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  264 (503)
T PLN02394        189 FDRRFESED---DPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFL-RGYLKICQDVKERRLALFKDYFVDERKKLMS  264 (503)
T ss_pred             hCCCccccc---chhHHHHHHHHHHHHHHhcccccchhhhchHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999985432   22222222222211111100  11223345442211 1111122222222222 223344544332  


Q ss_pred             ----cCCCCCcHHHHHhcccccCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCC
Q 011477          263 ----DRKIVPTLIDSLLKLQESEPEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDKHVGLSR  338 (485)
Q Consensus       263 ----~~~~~~dll~~ll~~~~~~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~~~~~~~  338 (485)
                          ..+...|+++.++++...  +.++++++..++.++++||+|||+++++|++|+|++||++|+||++|++++++.+.
T Consensus       265 ~~~~~~~~~~d~l~~ll~~~~~--~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~  342 (503)
T PLN02394        265 AKGMDKEGLKCAIDHILEAQKK--GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGN  342 (503)
T ss_pred             hccCCcchhhhHHHHHHhcccc--CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC
Confidence                112346899999987543  23899999999999999999999999999999999999999999999999998666


Q ss_pred             CCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhhccCCCCCCCCCCCCCCCccCc
Q 011477          339 LIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSVHMDPELWEDPDKFKPERFLMC  418 (485)
Q Consensus       339 ~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~Rf~~~  418 (485)
                      .++.+++++||||+|||+||||++|+++...+|.+.+|++++||.||+||.|.+++|.+||||++|+||++||||||+++
T Consensus       343 ~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~  422 (503)
T PLN02394        343 QVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEE  422 (503)
T ss_pred             CCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCC
Confidence            78899999999999999999999999999988999999999999999999999999999999999999999999999975


Q ss_pred             cc----ccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCC
Q 011477          419 EE----EQVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEER  466 (485)
Q Consensus       419 ~~----~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~  466 (485)
                      ++    ......|+|||+|+|+|+|++||++|+++++|+|+++|+|++.+|.
T Consensus       423 ~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~  474 (503)
T PLN02394        423 EAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQ  474 (503)
T ss_pred             CCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCC
Confidence            42    1235689999999999999999999999999999999999987765


No 11 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.3e-77  Score=582.86  Aligned_cols=447  Identities=26%  Similarity=0.509  Sum_probs=351.7

Q ss_pred             HHHHHHHhhcCCCCCCCCCCCCCCCeeecccCC-CCCchHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHhCCc
Q 011477           15 LIVYQHIRRNKIQPKNLPPSPPSLPIIGHFHLL-KMPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDI   93 (485)
Q Consensus        15 ~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~   93 (485)
                      ++.+.++.+...+..+.||||+++|++||+..+ ..++..++.+|+++||++|++++++.++++++||+.+++++.++..
T Consensus        14 ~~~~~~~~~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~   93 (502)
T PLN02966         14 VLLFFLYQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDV   93 (502)
T ss_pred             HHHHHHHhccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcc
Confidence            333444444444455789999999999999888 4456889999999999999999999999999999999999998776


Q ss_pred             ccCCCCCCccccccccccccccccCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCcccHHH
Q 011477           94 IFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSFKDVQKVDVKS  173 (485)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vd~~~  173 (485)
                      .|.+++..........+.....+..+|+.|+.+|+.+..++|+++++..+.+.+.++++.+++.|.+...++ +.+|+.+
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~-~~vdl~~  172 (502)
T PLN02966         94 NFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKS-EVVDISE  172 (502)
T ss_pred             cccCCCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CceeHHH
Confidence            676555433222222222223345679999999999444899999999999999999999999997654433 5799999


Q ss_pred             HHHHHHHHHHHHHHhcCccCcccccchhHHHHHHHHHHhhhccccCCCcccccccccccc-ccchHHHHHHHHHHHHHHH
Q 011477          174 LLYKLDFNIVIRMVAGKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFPFLRWFT-FYGAEQKIRKLRRKRDDFA  252 (485)
Q Consensus       174 ~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~  252 (485)
                      .+..+++|+++.++||.+++..    .+...++.+.+...........+..++|++..+. .....+......+...+++
T Consensus       173 ~~~~~t~dvi~~~~fG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (502)
T PLN02966        173 LMLTFTNSVVCRQAFGKKYNED----GEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYI  248 (502)
T ss_pred             HHHHHHHHHHHHHHhCCccCcc----chHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHH
Confidence            9999999999999999998643    2233445555544443332223334455432221 1111222334445555666


Q ss_pred             HHHHHHHHhh--cCCCCCcHHHHHhcccccC--CCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHH
Q 011477          253 QALLDEQRKA--DRKIVPTLIDSLLKLQESE--PEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARD  328 (485)
Q Consensus       253 ~~~i~~~~~~--~~~~~~dll~~ll~~~~~~--~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~  328 (485)
                      .+.++++.+.  ......++++.+++..+..  +..++++++.+++.++++||+|||+++++|++|+|++||++|+|+++
T Consensus       249 ~~~i~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~  328 (502)
T PLN02966        249 QEVVNETLDPKRVKPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQA  328 (502)
T ss_pred             HHHHHHHHhccccccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHH
Confidence            6666554332  1223468999999765432  33589999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCC--CCCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhhccCCCCC-C
Q 011477          329 EIDKHVGLS--RLIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSVHMDPELW-E  405 (485)
Q Consensus       329 Ei~~~~~~~--~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d~~~~-~  405 (485)
                      |++++++.+  ..++.+|+++|||++|||+||||++|+++...+|.+.+|++++||.|||||.|.++++.+||||++| |
T Consensus       329 Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~  408 (502)
T PLN02966        329 EVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGP  408 (502)
T ss_pred             HHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccC
Confidence            999998642  3578999999999999999999999999987679999999999999999999999999999999999 9


Q ss_pred             CCCCCCCCCccCccc--ccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCC
Q 011477          406 DPDKFKPERFLMCEE--EQVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEER  466 (485)
Q Consensus       406 ~p~~F~P~Rf~~~~~--~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~  466 (485)
                      ||++|+||||++.+.  ...+..|+|||+|+|+|+|++||.+|+++++|.|+++|+|++.++.
T Consensus       409 dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~  471 (502)
T PLN02966        409 NPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGM  471 (502)
T ss_pred             ChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCC
Confidence            999999999997543  1245789999999999999999999999999999999999988775


No 12 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=2.3e-76  Score=575.78  Aligned_cols=433  Identities=27%  Similarity=0.472  Sum_probs=343.6

Q ss_pred             CCCCCCCCCCCCCCeeecccCCC---CCchHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHhCCcccCCCCCCc
Q 011477           26 IQPKNLPPSPPSLPIIGHFHLLK---MPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLP  102 (485)
Q Consensus        26 ~~~~~~ppgp~~~p~~G~~~~~~---~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~~~~  102 (485)
                      ++..++||||+++|++||+..+.   .++..++.+++++||++|++++|+.++++++||+++++++.++...|..++...
T Consensus        31 ~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~  110 (519)
T PLN00168         31 KKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVA  110 (519)
T ss_pred             CCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCccc
Confidence            34557899999999999987663   345788999999999999999999999999999999999998887887776544


Q ss_pred             cccccccccccccc-cCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHH
Q 011477          103 SRGQEKEKIFTSIG-APYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSFKDVQKVDVKSLLYKLDFN  181 (485)
Q Consensus       103 ~~~~~~~~~~~~~~-~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vd~~~~~~~~~~~  181 (485)
                      .....+.+. ..+. ..+|+.|+++||.+..++|+.++++.+.+.+.++++.+++.+.+...++ +.+|+.+.+..++.+
T Consensus       111 ~~~~~~~~~-~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-~~v~~~~~~~~~~~~  188 (519)
T PLN00168        111 SSRLLGESD-NTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDA-AAPRVVETFQYAMFC  188 (519)
T ss_pred             chhhhccCC-CceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCcCHHHHHHHHHHH
Confidence            322222211 1222 3689999999885444899999999999999999999999997654333 468999999999999


Q ss_pred             HHHHHHhcCccCcccccchhHHHHHHHHHHhhhccc-cCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 011477          182 IVIRMVAGKRCFEEDEMNTDIAKDKLDELNQTFTPL-MPTALGDYFPFLRWFTFYGAEQKIRKLRRKRDDFAQALLDEQR  260 (485)
Q Consensus       182 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  260 (485)
                      +++.++||.++...      ....+........... ....+...+|++.+.......++..+..+.+.+++.+.+++++
T Consensus       189 ii~~~~fG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  262 (519)
T PLN00168        189 LLVLMCFGERLDEP------AVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARR  262 (519)
T ss_pred             HHHHHHcCCCcChh------hHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999987421      1112222222211111 1122334456542221112234455677788888888887765


Q ss_pred             hhc----C---------CCCCcHHHHHhcccc--cCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHH
Q 011477          261 KAD----R---------KIVPTLIDSLLKLQE--SEPEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKT  325 (485)
Q Consensus       261 ~~~----~---------~~~~dll~~ll~~~~--~~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~k  325 (485)
                      +..    .         ....|+++.+++...  +.+..++++++.+++.++++||+|||+++++|++++|++||++|+|
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~k  342 (519)
T PLN00168        263 EYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSK  342 (519)
T ss_pred             HHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHH
Confidence            431    0         014589999997642  2234599999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCC-CCCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhhccCCCCC
Q 011477          326 ARDEIDKHVGLS-RLIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSVHMDPELW  404 (485)
Q Consensus       326 lr~Ei~~~~~~~-~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d~~~~  404 (485)
                      +++|++++.+.+ ..++.+++++|||++|||+||||++|+++...+|.+.+|++++||.|||||.|.++++.+||||++|
T Consensus       343 l~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~  422 (519)
T PLN00168        343 LHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREW  422 (519)
T ss_pred             HHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCcccc
Confidence            999999998753 5689999999999999999999999999988789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccCccc-------ccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCC
Q 011477          405 EDPDKFKPERFLMCEE-------EQVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEER  466 (485)
Q Consensus       405 ~~p~~F~P~Rf~~~~~-------~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~  466 (485)
                      +||++||||||++.+.       ...+..|+|||.|+|+|||++||.+|+++++++|+++|+|++.++.
T Consensus       423 ~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~  491 (519)
T PLN00168        423 ERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGD  491 (519)
T ss_pred             CCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCC
Confidence            9999999999997421       1224689999999999999999999999999999999999987654


No 13 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=4.8e-76  Score=574.86  Aligned_cols=421  Identities=23%  Similarity=0.334  Sum_probs=334.7

Q ss_pred             CCCCCCCCCCeeecccCCCC-------------------CchHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHh
Q 011477           30 NLPPSPPSLPIIGHFHLLKM-------------------PMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTK   90 (485)
Q Consensus        30 ~~ppgp~~~p~~G~~~~~~~-------------------~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~   90 (485)
                      +.||||+++|++||+.++..                   .....+.+|+++||++|++++|+.+.++++||+++++++.+
T Consensus        42 ~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~~  121 (516)
T PLN02290         42 QGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLTK  121 (516)
T ss_pred             cCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHhc
Confidence            45899999999999877631                   12335788999999999999999999999999999999988


Q ss_pred             CCcccCCCCCCccccccccccccccccCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCccc
Q 011477           91 NDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSFKDVQKVD  170 (485)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vd  170 (485)
                      +. .+..++....... ....+.+++..+|+.|+++|+.++ +.|+.++++.+.+.+.++++.+++.+.+....++..+|
T Consensus       122 ~~-~~~~r~~~~~~~~-~~~~g~~l~~~~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vd  198 (516)
T PLN02290        122 YN-TVTGKSWLQQQGT-KHFIGRGLLMANGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEVE  198 (516)
T ss_pred             CC-CCCCCcchhhhHH-HHHhcCCccccCchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEE
Confidence            64 3434432211111 011123566778999999999998 78999999999999999999999999765443325799


Q ss_pred             HHHHHHHHHHHHHHHHHhcCccCcccccchhHHHHHHHHHHhhhccccCCCccccccccccccccchHHHHHHHHHHHHH
Q 011477          171 VKSLLYKLDFNIVIRMVAGKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFPFLRWFTFYGAEQKIRKLRRKRDD  250 (485)
Q Consensus       171 ~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~  250 (485)
                      +.+.+..+++|++++++||.++...    .. .....+.+.......   .....+|++.+++ ....+...+..+.+.+
T Consensus       199 ~~~~~~~~~~~vi~~~~fG~~~~~~----~~-~~~~~~~~~~~~~~~---~~~~~~p~~~~~p-~~~~~~~~~~~~~~~~  269 (516)
T PLN02290        199 IGEYMTRLTADIISRTEFDSSYEKG----KQ-IFHLLTVLQRLCAQA---TRHLCFPGSRFFP-SKYNREIKSLKGEVER  269 (516)
T ss_pred             hHHHHHHHHHHHHHHHHcCCccccc----hH-HHHHHHHHHHHHHHh---hhhhcCchhhhCC-ChhHHHHHHHHHHHHH
Confidence            9999999999999999999987432    11 112222222111111   1111244443333 1223455666778888


Q ss_pred             HHHHHHHHHHhhc-----CCCCCcHHHHHhccccc---CCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHH
Q 011477          251 FAQALLDEQRKAD-----RKIVPTLIDSLLKLQES---EPEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEV  322 (485)
Q Consensus       251 ~~~~~i~~~~~~~-----~~~~~dll~~ll~~~~~---~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~  322 (485)
                      ++.+.++++++..     ++...|+++.++++..+   ++..++++++.+++.++++||+|||+++++|++|+|++||++
T Consensus       270 ~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~v  349 (516)
T PLN02290        270 LLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTW  349 (516)
T ss_pred             HHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHH
Confidence            8888888776531     12357999999976432   223488999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhhccCCC
Q 011477          323 FKTARDEIDKHVGLSRLIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSVHMDPE  402 (485)
Q Consensus       323 ~~klr~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d~~  402 (485)
                      |+|+++|++++++.+ .++.+++++||||+|||+||||++|+++.. +|.+.+|++++||.|||||.|.++.+++||||+
T Consensus       350 q~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~  427 (516)
T PLN02290        350 QDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLL-PRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEE  427 (516)
T ss_pred             HHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCcccc-ceeecCCeeECCEEECCCCEEEecHHHhcCChh
Confidence            999999999999864 789999999999999999999999999865 799999999999999999999999999999999


Q ss_pred             CC-CCCCCCCCCCccCcccccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCC
Q 011477          403 LW-EDPDKFKPERFLMCEEEQVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEE  465 (485)
Q Consensus       403 ~~-~~p~~F~P~Rf~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~  465 (485)
                      +| +||++||||||++.+. ..+..|+|||.|+|.|+|++||++|+++++++|+++|++++.++
T Consensus       428 ~~~~dP~~F~PeRfl~~~~-~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~  490 (516)
T PLN02290        428 LWGKDANEFNPDRFAGRPF-APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDN  490 (516)
T ss_pred             hhCCChhhcCccccCCCCC-CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCC
Confidence            99 8999999999996432 23467999999999999999999999999999999999998876


No 14 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=3.5e-75  Score=560.46  Aligned_cols=429  Identities=24%  Similarity=0.397  Sum_probs=344.3

Q ss_pred             CCCCCCCCeeecccCCC-CCchHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHhCCcccCCCCCCccccccccc
Q 011477           32 PPSPPSLPIIGHFHLLK-MPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEK  110 (485)
Q Consensus        32 ppgp~~~p~~G~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~  110 (485)
                      ||||+++|++||+.++. .+++.++.+|+++||++|++++|+.++++|+||+.+++++.++...|.+++.........++
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            68999999999998884 45789999999999999999999999999999999999999888788776543332222211


Q ss_pred             ccccccc-CCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhccC-CCCcccHHHHHHHHHHHHHHHHHh
Q 011477          111 IFTSIGA-PYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSFK-DVQKVDVKSLLYKLDFNIVIRMVA  188 (485)
Q Consensus       111 ~~~~~~~-~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~-~~~~vd~~~~~~~~~~~~i~~~~f  188 (485)
                       ...++. .+|+.|+.+|+.+.+++|+...++.+.+.+.+.++.+++.+.+...+ .++.+|+.+.++.+++|+++.++|
T Consensus        81 -~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~f  159 (466)
T PLN02655         81 -KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQAL  159 (466)
T ss_pred             -CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHh
Confidence             122333 45999999999887678998888889999999999988888655332 236799999999999999999999


Q ss_pred             cCccCcccccch--h--HHHHHHHHHHhhhccccCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhh--
Q 011477          189 GKRCFEEDEMNT--D--IAKDKLDELNQTFTPLMPTALGDYFPFLRWFTFYGAEQKIRKLRRKRDDFAQALLDEQRKA--  262 (485)
Q Consensus       189 G~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--  262 (485)
                      |.++......+.  .  ....+...+...+.......+.+.+|++++++.....+...+....+.+++.+.++++++.  
T Consensus       160 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  239 (466)
T PLN02655        160 GEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIA  239 (466)
T ss_pred             ccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            998754321000  0  0122233333333332222334567776665533333344444455567777777766654  


Q ss_pred             cCCCCCcHHHHHhcccccCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCCCCc
Q 011477          263 DRKIVPTLIDSLLKLQESEPEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDKHVGLSRLIED  342 (485)
Q Consensus       263 ~~~~~~dll~~ll~~~~~~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~~~~~~~~~~~  342 (485)
                      ..+...|+++.++....    .++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+.+. ++.
T Consensus       240 ~~~~~~d~l~~ll~~~~----~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~  314 (466)
T PLN02655        240 RGEERDCYLDFLLSEAT----HLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-VTE  314 (466)
T ss_pred             CCCCcccHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-CCH
Confidence            22334689999997642    3899999999999999999999999999999999999999999999999998644 899


Q ss_pred             ccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhhccCCCCCCCCCCCCCCCccCccc-c
Q 011477          343 ADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSVHMDPELWEDPDKFKPERFLMCEE-E  421 (485)
Q Consensus       343 ~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~Rf~~~~~-~  421 (485)
                      +++++|||++|||+||||++|+++...+|++.+|++++||.|||||.|+++.+++||||++|+||++||||||++.+. .
T Consensus       315 ~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~~  394 (466)
T PLN02655        315 EDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYES  394 (466)
T ss_pred             HHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCccc
Confidence            999999999999999999999999987899999999999999999999999999999999999999999999997643 2


Q ss_pred             cCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCC
Q 011477          422 QVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEER  466 (485)
Q Consensus       422 ~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~  466 (485)
                      .....|+|||+|+|.|||++||..|+++++++|+++|++++.++.
T Consensus       395 ~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~  439 (466)
T PLN02655        395 ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGD  439 (466)
T ss_pred             CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCC
Confidence            235789999999999999999999999999999999999987663


No 15 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=4.9e-74  Score=556.18  Aligned_cols=451  Identities=24%  Similarity=0.457  Sum_probs=340.4

Q ss_pred             HHHHHHHHhhcCC---CCCCCCCCCCCCCeeecccCCC--CCchHHHHHHHhhh-CCeEEEEecCccEEEecchHHHHHH
Q 011477           14 LLIVYQHIRRNKI---QPKNLPPSPPSLPIIGHFHLLK--MPMSQTLTNLCNKY-GPILLLQVGSRPTLVVSSRSAIEEC   87 (485)
Q Consensus        14 ~~~~~~~~~~~~~---~~~~~ppgp~~~p~~G~~~~~~--~~~~~~~~~~~~ky-G~v~~~~~~~~~~v~i~dp~~i~~i   87 (485)
                      +.++-+...++..   ...+.||||+++|++||+.++.  .....++.++.++| |+||++++|+.++|+|+||+.++++
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikev  100 (534)
T PLN03018         21 ITLLGRILSRPSKTKDRSRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREA  100 (534)
T ss_pred             HHHHHHHHhhhcccCCCCCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHH
Confidence            3444444444332   2335799999999999998873  23234566777776 7999999999999999999999999


Q ss_pred             HHhCCcccCCCCCCccccccccccccccccCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCC
Q 011477           88 LTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSFKDVQ  167 (485)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~  167 (485)
                      +.++...|.+++..........+..+..+..+|+.|+.+|+++++..++......+.+.+..+++.+++.+.+....+ +
T Consensus       101 l~~~~~~f~~rp~~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~  179 (534)
T PLN03018        101 FRERDADLADRPQLSIMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRS-E  179 (534)
T ss_pred             HHhCcHhhcCCCCchhhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccC-C
Confidence            998877788877544333232221234445569999999999994344555555566666677889999987654333 5


Q ss_pred             cccHHHHHHHHHHHHHHHHHhcCccCcccc---cchhH---HHHHHHHHHhhhccccCCCcccccc-ccccccccchHHH
Q 011477          168 KVDVKSLLYKLDFNIVIRMVAGKRCFEEDE---MNTDI---AKDKLDELNQTFTPLMPTALGDYFP-FLRWFTFYGAEQK  240 (485)
Q Consensus       168 ~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~  240 (485)
                      ++|+.+.+.++++|++++++||.++...+.   .....   .....................+.+| |++++.......+
T Consensus       180 ~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  259 (534)
T PLN03018        180 TVDVRELSRVYGYAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEER  259 (534)
T ss_pred             ceeHHHHHHHHHHHHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHH
Confidence            799999999999999999999998743210   00111   1111121111111111111223334 4432221222334


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhh---c-C-CCCCcHHHHHhcccccCCC-CCCHHHHHHHHHHHHHcCchhHHHHHHHHHH
Q 011477          241 IRKLRRKRDDFAQALLDEQRKA---D-R-KIVPTLIDSLLKLQESEPE-FYNDNVIKGIVQALLIAGPHTTVTTMELVVS  314 (485)
Q Consensus       241 ~~~~~~~~~~~~~~~i~~~~~~---~-~-~~~~dll~~ll~~~~~~~~-~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~  314 (485)
                      .....+.+.+++.+.++++++.   . . ....|+++.+++..+.+++ .++++++..++.++++||+|||+++++|+++
T Consensus       260 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~  339 (534)
T PLN03018        260 AKVNVNLVRSYNNPIIDERVELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLG  339 (534)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            4445566777778887776542   1 1 1246999999976554443 4899999999999999999999999999999


Q ss_pred             HHhhChHHHHHHHHHHHHhcCCCCCCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeec
Q 011477          315 RMITHSEVFKTARDEIDKHVGLSRLIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINV  394 (485)
Q Consensus       315 ~L~~~p~~~~klr~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~  394 (485)
                      +|+.||++|+|+++||+++++.+..++.+++++|||++|||+||||++|+++...+|++.+|++++||.||||+.|+++.
T Consensus       340 ~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~  419 (534)
T PLN03018        340 EMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCR  419 (534)
T ss_pred             HHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEECh
Confidence            99999999999999999999876778999999999999999999999999998877999999999999999999999999


Q ss_pred             hhhccCCCCCCCCCCCCCCCccCcccc-------cCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCC
Q 011477          395 WSVHMDPELWEDPDKFKPERFLMCEEE-------QVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEE  465 (485)
Q Consensus       395 ~~~~~d~~~~~~p~~F~P~Rf~~~~~~-------~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~  465 (485)
                      +++||||++|+||++|+||||++.+..       ..+..|+|||+|+|.|+|++||.+|+++++++|+++|++++.++
T Consensus       420 ~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~  497 (534)
T PLN03018        420 PGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQD  497 (534)
T ss_pred             HHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCC
Confidence            999999999999999999999975431       23568999999999999999999999999999999999987654


No 16 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2.9e-75  Score=565.12  Aligned_cols=415  Identities=23%  Similarity=0.311  Sum_probs=327.6

Q ss_pred             hcCCCCCCCCCCCCCCCeeecccCC-C----CCchHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHhCCcccCC
Q 011477           23 RNKIQPKNLPPSPPSLPIIGHFHLL-K----MPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFAN   97 (485)
Q Consensus        23 ~~~~~~~~~ppgp~~~p~~G~~~~~-~----~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~   97 (485)
                      +...+..+.||||+++|++||+..+ +    ..+..++.+++++||+++++++|++++|+++||+++++++.+++..|..
T Consensus        31 ~~~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~  110 (490)
T PLN02500         31 RPKQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFEC  110 (490)
T ss_pred             ccccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEe
Confidence            3445566789999999999997643 1    3456789999999999999999999999999999999999987766653


Q ss_pred             CCCCccccccccccccccccCCChhHHHHHHHHHHhhcchhhhhh-hhhhHHHHHHHHHHHHHhhccCCCCcccHHHHHH
Q 011477           98 RPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLL-SANIRTEEIRFMAKHLFQSSFKDVQKVDVKSLLY  176 (485)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~~vd~~~~~~  176 (485)
                      +.........+   ..+++..+|+.|+.+|+.++ +.|++.+++. +.+.+.+.+..+++.+..    + +.+|+.+.+.
T Consensus       111 ~~~~~~~~~~g---~~~~~~~~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~~----~-~~vd~~~~~~  181 (490)
T PLN02500        111 SYPRSIGGILG---KWSMLVLVGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWKE----N-STFSAQDEAK  181 (490)
T ss_pred             eCchHHHHHhC---cccccccCCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhCC----C-CCEEehHHHH
Confidence            32211111111   12455568999999999998 8899998876 567777777777776632    2 4799999999


Q ss_pred             HHHHHHHHHHHhcCccCcccccchhHHHHHHHHHHhhhccccCCCccccccccccccccchHHHHHHHHHHHHHHHHHHH
Q 011477          177 KLDFNIVIRMVAGKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFPFLRWFTFYGAEQKIRKLRRKRDDFAQALL  256 (485)
Q Consensus       177 ~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  256 (485)
                      ++++|++++++||.+....      ....+.+.+.........  ....+|...       .++..++.+.+.+++.+.+
T Consensus       182 ~~~~~vi~~~~fg~~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~p~~~-------~~~~~~~~~~~~~~~~~~i  246 (490)
T PLN02500        182 KFTFNLMAKHIMSMDPGEE------ETEQLKKEYVTFMKGVVS--APLNFPGTA-------YRKALKSRATILKFIERKM  246 (490)
T ss_pred             HHHHHHHHHHHhCCCCCch------HHHHHHHHHHHHHhhhhc--chhcCCCcc-------cHHHHHHHHHHHHHHHHHH
Confidence            9999999999999875321      112222222222221100  001123211       1344456677777788887


Q ss_pred             HHHHhh---cC--CCCCcHHHHHhcccccCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHH
Q 011477          257 DEQRKA---DR--KIVPTLIDSLLKLQESEPEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEID  331 (485)
Q Consensus       257 ~~~~~~---~~--~~~~dll~~ll~~~~~~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~  331 (485)
                      +++++.   +.  ....|+++.+++..     .++++++.+++.++++||+|||+++++|++|+|++||++|+|+++|++
T Consensus       247 ~~~~~~~~~~~~~~~~~d~l~~ll~~~-----~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~  321 (490)
T PLN02500        247 EERIEKLKEEDESVEEDDLLGWVLKHS-----NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHL  321 (490)
T ss_pred             HHHHHhhhcccCCCCcchHHHHHHhcc-----CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence            776543   11  13468999999742     389999999999999999999999999999999999999999999999


Q ss_pred             HhcC-----CCCCCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhhccCCCCCCC
Q 011477          332 KHVG-----LSRLIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSVHMDPELWED  406 (485)
Q Consensus       332 ~~~~-----~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d~~~~~~  406 (485)
                      ++.+     .+..++.+|+++|||++|||+||||++|+++.. +|.+.+|++++||.|||||.|+++.|++||||++|+|
T Consensus       322 ~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~d  400 (490)
T PLN02500        322 EIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQ  400 (490)
T ss_pred             HHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-eeEeCCCceeCCEEECCCCEEEechhhcccCcccCCC
Confidence            9863     134578999999999999999999999999987 5999999999999999999999999999999999999


Q ss_pred             CCCCCCCCccCcccc--------cCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCCC
Q 011477          407 PDKFKPERFLMCEEE--------QVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEERP  467 (485)
Q Consensus       407 p~~F~P~Rf~~~~~~--------~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~  467 (485)
                      |++||||||++++..        ..+..|+|||+|+|.|+|++||.+|+++++++|+++|+|++.++..
T Consensus       401 P~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~  469 (490)
T PLN02500        401 PQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQ  469 (490)
T ss_pred             ccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCc
Confidence            999999999975431        1357899999999999999999999999999999999999887763


No 17 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.7e-74  Score=555.27  Aligned_cols=413  Identities=19%  Similarity=0.237  Sum_probs=331.6

Q ss_pred             CCCCCCCCCCCCCCeeecccCCCCCchHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHhCCcccCCCCCCcccc
Q 011477           26 IQPKNLPPSPPSLPIIGHFHLLKMPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRG  105 (485)
Q Consensus        26 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~~~~~~~  105 (485)
                      ...++.||||+++|++||+..+.++...++.+++++||++|++++|++++++++||+.+++++.++...|..........
T Consensus        27 ~~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~  106 (463)
T PLN02774         27 YSKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLD  106 (463)
T ss_pred             cCCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHH
Confidence            34447789999999999998875555789999999999999999999999999999999999987765553322111111


Q ss_pred             ccccccccccccCCChhHHHHHHHHHHhhcchhhhhh-hhhhHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHH
Q 011477          106 QEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLL-SANIRTEEIRFMAKHLFQSSFKDVQKVDVKSLLYKLDFNIVI  184 (485)
Q Consensus       106 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~~vd~~~~~~~~~~~~i~  184 (485)
                      ..+   .++++..+|+.|+.+|+.++ +.|++..++. +.+.+.+.+.+++++|..    + +++|+.+.+..+++++++
T Consensus       107 ~lg---~~~~~~~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~v~~~~~~~~~~~~~~~  177 (463)
T PLN02774        107 ILG---TCNIAAVHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWDG----L-KTIDIQEKTKEMALLSAL  177 (463)
T ss_pred             HhC---ccchhhcCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhCC----C-CCEEeeHHHHHHHHHHHH
Confidence            121   12455668999999999998 7899998875 688888888888777642    1 579999999999999999


Q ss_pred             HHHhcCccCcccccchhHHHHHHHHHHhhhccccCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011477          185 RMVAGKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFPFLRWFTFYGAEQKIRKLRRKRDDFAQALLDEQRKADR  264 (485)
Q Consensus       185 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  264 (485)
                      +++||.....       ...++.+.+.......  .    .+|.  +++.. ..++..++.+.+.+++.+.++++++. .
T Consensus       178 ~~~~g~~~~~-------~~~~~~~~~~~~~~~~--~----~~~~--~lp~~-~~~~~~~~~~~~~~~~~~~i~~r~~~-~  240 (463)
T PLN02774        178 KQIAGTLSKP-------ISEEFKTEFFKLVLGT--L----SLPI--DLPGT-NYRSGVQARKNIVRMLRQLIQERRAS-G  240 (463)
T ss_pred             HHHcCCCChH-------HHHHHHHHHHHHhccc--c----cCCc--CCCCh-hhhHHHHHHHHHHHHHHHHHHHHHhc-C
Confidence            9999986522       1122333322222110  0    1121  11111 12455667888888898888887765 3


Q ss_pred             CCCCcHHHHHhcccccCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCC---CCCCC
Q 011477          265 KIVPTLIDSLLKLQESEPEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDKHVGL---SRLIE  341 (485)
Q Consensus       265 ~~~~dll~~ll~~~~~~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~~~~~---~~~~~  341 (485)
                      ....|+++.+++... .+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+.   +..++
T Consensus       241 ~~~~d~l~~ll~~~~-~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~  319 (463)
T PLN02774        241 ETHTDMLGYLMRKEG-NRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPID  319 (463)
T ss_pred             CCcccHHHHHHhCcc-CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCC
Confidence            345799999997433 23348999999999999999999999999999999999999999999999999863   34678


Q ss_pred             cccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhhccCCCCCCCCCCCCCCCccCcccc
Q 011477          342 DADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSVHMDPELWEDPDKFKPERFLMCEEE  421 (485)
Q Consensus       342 ~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~Rf~~~~~~  421 (485)
                      ++++++|||++|||+|+||++|+++.. +|++.+|++++||.||||+.|+++.+.+||||++|+||++||||||++.+..
T Consensus       320 ~~~l~~lpyl~a~ikE~lRl~P~v~~~-~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~  398 (463)
T PLN02774        320 WNDYKSMRFTRAVIFETSRLATIVNGV-LRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLE  398 (463)
T ss_pred             HHHHhcCcHHHHHHHHHHhcCCCCCCc-ccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcC
Confidence            999999999999999999999999876 4999999999999999999999999999999999999999999999975432


Q ss_pred             cCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCCC
Q 011477          422 QVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEERP  467 (485)
Q Consensus       422 ~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~  467 (485)
                       ....|+|||+|+|.|||++||.+|++++++.|+++|+|++.++.+
T Consensus       399 -~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~  443 (463)
T PLN02774        399 -SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDK  443 (463)
T ss_pred             -CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCc
Confidence             234699999999999999999999999999999999999987764


No 18 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.4e-74  Score=554.26  Aligned_cols=422  Identities=27%  Similarity=0.461  Sum_probs=337.3

Q ss_pred             CCCCCCCCCCCCeeecccCCC-C--CchHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHhCCcccCCCCCCc-c
Q 011477           28 PKNLPPSPPSLPIIGHFHLLK-M--PMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLP-S  103 (485)
Q Consensus        28 ~~~~ppgp~~~p~~G~~~~~~-~--~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~~~~-~  103 (485)
                      ..+.||||+++|++|++..+. .  ....++.++..+||++|+.|+++.++++++||+.+++|+.++.....+.+.+. .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            346789999999999999983 3  46778899999999999999999999999999999999976554444444443 2


Q ss_pred             ccccccccccccccCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHH
Q 011477          104 RGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSFKDVQKVDVKSLLYKLDFNIV  183 (485)
Q Consensus       104 ~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vd~~~~~~~~~~~~i  183 (485)
                      ....   .+.+++..+|+.|+.+||+++ +.|+...++.+...+.++...+...+.....+  ..+|+.+.++++++|++
T Consensus       113 ~~~~---lG~gll~~~g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~--~~vd~~~~~~~~tld~i  186 (497)
T KOG0157|consen  113 LKPW---LGDGLLFSDGEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELAASG--EEVDLQDLLKRLTLDII  186 (497)
T ss_pred             HHHH---hcCccccCCchHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CeEcHHHHHHHHHHHHH
Confidence            2111   223455556999999999999 89999999999999999999988888775432  23999999999999999


Q ss_pred             HHHHhcCcc-CcccccchhHHHHHHHHHHhhhccccCCCcccccc-ccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q 011477          184 IRMVAGKRC-FEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFP-FLRWFTFYGAEQKIRKLRRKRDDFAQALLDEQRK  261 (485)
Q Consensus       184 ~~~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (485)
                      +.++||... +..    .....++.+++........   .....| +..++......++..++.+.+.+++++.|+++++
T Consensus       187 ~~~~~G~~~~~~~----~~~~~~~~~a~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~  259 (497)
T KOG0157|consen  187 CKTAMGPESLDAE----GPELFEYVQAFDDLTELIS---KRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERRE  259 (497)
T ss_pred             HHHhcCCcccccc----CCcccHHHHHHHHHHHHHH---HHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999322 222    2222334444443222211   111234 3333333335678889999999999999998886


Q ss_pred             h---cC----CCCCcHHHHHhcccccCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhc
Q 011477          262 A---DR----KIVPTLIDSLLKLQESEPEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDKHV  334 (485)
Q Consensus       262 ~---~~----~~~~dll~~ll~~~~~~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~~~  334 (485)
                      .   ..    ....|+++.+....+   +.++++++.+++.++++||+||||++++|+++.|+.||++|+|+++|+.+++
T Consensus       260 ~~~~~~~~~~~~~~d~L~~~~~~~~---~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~  336 (497)
T KOG0157|consen  260 ELEKEGSGEEKKRLDFLDTLLLEED---KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEIL  336 (497)
T ss_pred             HHHhcCCcccchhhhHHHHHHHhcc---CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence            5   11    345678885333222   4599999999999999999999999999999999999999999999999999


Q ss_pred             CCCC-CCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccc-cceeeCCCCEEEeechhhccCCCCCC-CCCCCC
Q 011477          335 GLSR-LIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTV-GGYHVPGGTQLLINVWSVHMDPELWE-DPDKFK  411 (485)
Q Consensus       335 ~~~~-~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~-~g~~Ip~g~~v~~~~~~~~~d~~~~~-~p~~F~  411 (485)
                      +.+. ..+..+.++|+|+++||+||||||||+|... |.+.+|+++ +||.||||+.|.++++.+|||+.+|+ ||++||
T Consensus       337 ~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~-R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~  415 (497)
T KOG0157|consen  337 GNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVA-RKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFD  415 (497)
T ss_pred             CCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhh-cccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcC
Confidence            7432 2233334469999999999999999999996 999999999 58999999999999999999999995 999999


Q ss_pred             CCCccCccc--ccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCC
Q 011477          412 PERFLMCEE--EQVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEER  466 (485)
Q Consensus       412 P~Rf~~~~~--~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~  466 (485)
                      ||||++++.  ..++++|+|||+|+|.|+|++||++|+|++++.|+++|+|++..+.
T Consensus       416 PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~  472 (497)
T KOG0157|consen  416 PERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGD  472 (497)
T ss_pred             ccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCC
Confidence            999997643  3457899999999999999999999999999999999999988774


No 19 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=9.9e-74  Score=514.55  Aligned_cols=427  Identities=23%  Similarity=0.317  Sum_probs=361.3

Q ss_pred             CCCCCCCCCCeeecccCC----CCCchHHHHHHHhhhCCeEEEE-ecCccEEEecchHHHHHHHHhCCcccCCCC-CCcc
Q 011477           30 NLPPSPPSLPIIGHFHLL----KMPMSQTLTNLCNKYGPILLLQ-VGSRPTLVVSSRSAIEECLTKNDIIFANRP-LLPS  103 (485)
Q Consensus        30 ~~ppgp~~~p~~G~~~~~----~~~~~~~~~~~~~kyG~v~~~~-~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~-~~~~  103 (485)
                      ..+|||+++|++|....+    ....++.....+++|||||+.. +|+...|.+.||+.++.++++++.. +-++ ....
T Consensus        50 ~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~~-P~Rp~~~~~  128 (519)
T KOG0159|consen   50 EEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGKY-PFRPLLIEP  128 (519)
T ss_pred             hhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCCC-CCcccccch
Confidence            456999999999998843    3456888999999999999999 7888999999999999999998843 4443 1111


Q ss_pred             ---ccccccccccccccCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhcc--CCCCcccHHHHHHHH
Q 011477          104 ---RGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSF--KDVQKVDVKSLLYKL  178 (485)
Q Consensus       104 ---~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~--~~~~~vd~~~~~~~~  178 (485)
                         .... .+...++++.+|++|.+.|..+++.++++++.+.|.+.+...+++++..+....+  ++....|+.+.+.++
T Consensus       129 w~~~rd~-~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~w  207 (519)
T KOG0159|consen  129 WVAYRDF-RGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRW  207 (519)
T ss_pred             hhhhHHh-hccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHH
Confidence               1111 1224578888999999999999988999999999999999999999999987765  344588999999999


Q ss_pred             HHHHHHHHHhcCccCcccccchhHHHHHHHHHHhhhccccCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 011477          179 DFNIVIRMVAGKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFPFLRWFTFYGAEQKIRKLRRKRDDFAQALLDE  258 (485)
Q Consensus       179 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  258 (485)
                      ++..|+.++||.++++.....+++...+++++..++.......+.  -++.++++ .+.+++..++.+.+.++....|++
T Consensus       208 slEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~--p~l~r~~~-t~~wk~~~~~~D~i~~~~~~~Id~  284 (519)
T KOG0159|consen  208 SLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLM--PSLWRYFP-TKVWKDFVRAWDQIFDVGDKYIDN  284 (519)
T ss_pred             HHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhc--chHHHhCC-ChHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998887777888999999999998875433221  13445554 345577777777777777777776


Q ss_pred             HHhh----cCC--CCCcHHHHHhcccccCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 011477          259 QRKA----DRK--IVPTLIDSLLKLQESEPEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDK  332 (485)
Q Consensus       259 ~~~~----~~~--~~~dll~~ll~~~~~~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~  332 (485)
                      ..++    +..  +..+.+-.++...+     ++.+++..++++++.||.|||+.++.|+||+|++||++|+||++|+.+
T Consensus       285 ~l~~l~~~~~~~~~~~~~l~~~L~~~~-----l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~  359 (519)
T KOG0159|consen  285 ALEELEKQDSAGSEYTGSLLELLLRKE-----LSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILA  359 (519)
T ss_pred             HHHHHHhccccccchhHHHHHHHHHcc-----CCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHh
Confidence            6555    111  22334444443322     899999999999999999999999999999999999999999999999


Q ss_pred             hcCC-CCCCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhhccCCCCCCCCCCCC
Q 011477          333 HVGL-SRLIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSVHMDPELWEDPDKFK  411 (485)
Q Consensus       333 ~~~~-~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~F~  411 (485)
                      +... +..++.+++.+||||.||||||+||||.++... |+..+|.+++||.|||||.|.++++.+-+||++|++|++|+
T Consensus       360 ~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~-R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~  438 (519)
T KOG0159|consen  360 VLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNG-RVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFL  438 (519)
T ss_pred             hCCCcccccchHHHhhCHHHHHHHHhhhceeccccccc-cccchhceeccceecCCCeEEEeehhhccChhhCCCccccC
Confidence            9987 578999999999999999999999999999997 99999999999999999999999999999999999999999


Q ss_pred             CCCccCcc-cccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCCC
Q 011477          412 PERFLMCE-EEQVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEERP  467 (485)
Q Consensus       412 P~Rf~~~~-~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~  467 (485)
                      ||||++.+ ...++..++|||.|+|+|+|+++|++|+.+++|+++++|+++..++.|
T Consensus       439 PeRWL~~~~~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~p  495 (519)
T KOG0159|consen  439 PERWLKPSTKTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEP  495 (519)
T ss_pred             hhhhcccccCCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCC
Confidence            99999998 678899999999999999999999999999999999999999888653


No 20 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=4e-75  Score=566.99  Aligned_cols=430  Identities=31%  Similarity=0.503  Sum_probs=357.1

Q ss_pred             CCCCCCCCeeecccCCC--CCchHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHhCCcccCCCCCCccccc-cc
Q 011477           32 PPSPPSLPIIGHFHLLK--MPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQ-EK  108 (485)
Q Consensus        32 ppgp~~~p~~G~~~~~~--~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~~~~~~~~-~~  108 (485)
                      ||||+++|++||+.++.  ..+++++.+++++||+||+++++++++++|+||+.+++|+..++..+..++....... ..
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            79999999999999985  5678889999999999999999999999999999999999998766655433222221 11


Q ss_pred             cccccccccCCChhHHHHHHHHHHhhcchh-hhhhhhhhHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHH
Q 011477          109 EKIFTSIGAPYGEHWRNLRRVYALEIFSPR-RLLLSANIRTEEIRFMAKHLFQSSFKDVQKVDVKSLLYKLDFNIVIRMV  187 (485)
Q Consensus       109 ~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~-~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vd~~~~~~~~~~~~i~~~~  187 (485)
                      .....+++..+|+.|+.+|+.++ +.|+.. .+ .+.+.+.+.++.+++.+......+ +.+|+.++++.+++|++++++
T Consensus        81 ~~~~~~l~~~~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~-~~vd~~~~~~~~~~d~i~~~~  157 (463)
T PF00067_consen   81 PFGGKGLFFSDGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSS-GPVDLFDWLRRFALDVIGRVL  157 (463)
T ss_dssp             HHTTTSSTTSSHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSE-SEEEHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccc-ccccccccc-cccccccccccccccccccccccc-ceeeeeccccccccccccccc
Confidence            12234567777899999999999 678877 66 899999999999999998877654 379999999999999999999


Q ss_pred             hcCccCcccccchhHHHHHHHHHHhhhccccC--CCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhc-C
Q 011477          188 AGKRCFEEDEMNTDIAKDKLDELNQTFTPLMP--TALGDYFPFLRWFTFYGAEQKIRKLRRKRDDFAQALLDEQRKAD-R  264 (485)
Q Consensus       188 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~  264 (485)
                      ||.+++..+   .....++.+.+.........  ..+...+|++.+++. ...+...++.+.+.+++.+.++++++.. .
T Consensus       158 fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  233 (463)
T PF00067_consen  158 FGKDFGSLD---DEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPT-PLFRRFKRARDRLRKYIKEIIEERREELDD  233 (463)
T ss_dssp             HSSHHHGTT---HHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSH-HHHHHHHHHHHHHHHHHHHHHHHHHHSHHS
T ss_pred             ccceeeecc---ccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccc
Confidence            999975332   23233444444444332211  113344565555542 3446677778889999999999888762 2


Q ss_pred             --CCCCcHHHHHhccc-ccCC-CCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCCC
Q 011477          265 --KIVPTLIDSLLKLQ-ESEP-EFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDKHVGLSRLI  340 (485)
Q Consensus       265 --~~~~dll~~ll~~~-~~~~-~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~~~~~~~~~  340 (485)
                        ....|+++.++... +.++ ..++++++..++..+++||+|||+++++|++++|++||++|+||++||+++.+.+..+
T Consensus       234 ~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~  313 (463)
T PF00067_consen  234 GDESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREI  313 (463)
T ss_dssp             SSSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence              35789999999987 4444 3699999999999999999999999999999999999999999999999999777789


Q ss_pred             CcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhhccCCCCCCCCCCCCCCCccCccc
Q 011477          341 EDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSVHMDPELWEDPDKFKPERFLMCEE  420 (485)
Q Consensus       341 ~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~Rf~~~~~  420 (485)
                      +.+++++||||+|||+||||++|+++...+|++.+|++++||.|||||.|+++.+.+|+||++|+||++||||||++.+.
T Consensus       314 ~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~  393 (463)
T PF00067_consen  314 TFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERG  393 (463)
T ss_dssp             HHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999999999555699999999999999999999999999999999999999999999999875


Q ss_pred             --ccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCCCe
Q 011477          421 --EQVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEERPF  468 (485)
Q Consensus       421 --~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~  468 (485)
                        ...+..|+|||.|+|.|||++||++|+++++|+|+++|||+++++.+.
T Consensus       394 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~  443 (463)
T PF00067_consen  394 ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEP  443 (463)
T ss_dssp             TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSG
T ss_pred             ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCC
Confidence              456889999999999999999999999999999999999999876633


No 21 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=5.8e-73  Score=544.01  Aligned_cols=438  Identities=20%  Similarity=0.294  Sum_probs=347.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCeeecccCC-CCCchHHHHHHHhhhCCeEEEEecCccEEEecchHH
Q 011477            5 HYLGLLVSILLIVYQHIRRNKIQPKNLPPSPPSLPIIGHFHLL-KMPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSA   83 (485)
Q Consensus         5 ~~~~~l~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~   83 (485)
                      ++.++++++++.+|..+++......+.||||+++|++|++.++ ..+++.++.+++++||+++++++++.+.++++||++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~   89 (463)
T PLN02196         10 LFAGALFLCLLRFLAGFRRSSSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEA   89 (463)
T ss_pred             HHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHH
Confidence            4444455555555555555444555678999999999998875 566788999999999999999999999999999999


Q ss_pred             HHHHHHhCCcccCCCCCCccccccccccccccccCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhcc
Q 011477           84 IEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSF  163 (485)
Q Consensus        84 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~  163 (485)
                      +++++.++...|.  +..........+ ..+++..+|+.|+++|+.++ +.|++++++.+.+.+.+.+.++++.|.    
T Consensus        90 ~~~vl~~~~~~~~--~~~~~~~~~~~g-~~~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~----  161 (463)
T PLN02196         90 AKFVLVTKSHLFK--PTFPASKERMLG-KQAIFFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE----  161 (463)
T ss_pred             HHHHHhCCCCccc--ccCchHHHHHcC-cccccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC----
Confidence            9999988776563  222211111111 13566678999999999999 799999999999999999999888773    


Q ss_pred             CCCCcccHHHHHHHHHHHHHHHHHhcCccCcccccchhHHHHHHHHHHhhhccccCCCccccccccccccccchHHHHHH
Q 011477          164 KDVQKVDVKSLLYKLDFNIVIRMVAGKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFPFLRWFTFYGAEQKIRK  243 (485)
Q Consensus       164 ~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~  243 (485)
                       + +.+|+.+++..+++++++.++||.+....    ..........+...+         ..+|+.  ++. ...++..+
T Consensus       162 -~-~~v~~~~~~~~~~~~v~~~~~fG~~~~~~----~~~~~~~~~~~~~~~---------~~~~~~--~p~-~~~~~~~~  223 (463)
T PLN02196        162 -G-TQINTYQEMKTYTFNVALLSIFGKDEVLY----REDLKRCYYILEKGY---------NSMPIN--LPG-TLFHKSMK  223 (463)
T ss_pred             -C-CeEEeHHHHHHHHHHHHHHHHcCCCCchH----HHHHHHHHHHHhcch---------hccccc--CCC-ccchHHHH
Confidence             1 47899999999999999999999875221    111111111111111         112321  110 11245667


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCcHHHHHhcccccCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHH
Q 011477          244 LRRKRDDFAQALLDEQRKADRKIVPTLIDSLLKLQESEPEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVF  323 (485)
Q Consensus       244 ~~~~~~~~~~~~i~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~  323 (485)
                      +.+.+.+++.+.++++++. .+...|+++.+++..    +.++++++.+++..+++||+|||+++++|++++|++||++|
T Consensus       224 a~~~~~~~~~~~i~~~~~~-~~~~~d~l~~ll~~~----~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq  298 (463)
T PLN02196        224 ARKELAQILAKILSKRRQN-GSSHNDLLGSFMGDK----EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVL  298 (463)
T ss_pred             HHHHHHHHHHHHHHHHhhc-CCCcccHHHHHHhcC----CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHH
Confidence            7788888888888877664 334578999998632    34899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCC---CCCCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhhccC
Q 011477          324 KTARDEIDKHVGL---SRLIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSVHMD  400 (485)
Q Consensus       324 ~klr~Ei~~~~~~---~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d  400 (485)
                      +|+++|++++.+.   +..++.+++++|||++|||+||||++|+++... |.+.+|++++||.||||+.|+++.+.+|||
T Consensus       299 ~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~-R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd  377 (463)
T PLN02196        299 EAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTF-REAVEDVEYEGYLIPKGWKVLPLFRNIHHS  377 (463)
T ss_pred             HHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccc-eeeccccccCCEEeCCCCEEEeeHHHhcCC
Confidence            9999999998763   356889999999999999999999999999886 999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccCcccccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCC-CeeE--EeecCcc
Q 011477          401 PELWEDPDKFKPERFLMCEEEQVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEER-PFKI--IFRPREK  477 (485)
Q Consensus       401 ~~~~~~p~~F~P~Rf~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~-~~~~--~~~~r~~  477 (485)
                      |++|+||++|+||||++..   .+..|+|||+|+|.|+|++||++|++++++.|+++|+|++.++. .+..  ...|+.+
T Consensus       378 ~~~~~dP~~F~PeRfl~~~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~p~~~  454 (463)
T PLN02196        378 ADIFSDPGKFDPSRFEVAP---KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSNGIQYGPFALPQNG  454 (463)
T ss_pred             chhcCCcCccChhhhcCCC---CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCCceEEcccccCCCC
Confidence            9999999999999999742   46789999999999999999999999999999999999988764 2322  2456554


No 22 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=5.4e-73  Score=552.85  Aligned_cols=424  Identities=22%  Similarity=0.294  Sum_probs=322.4

Q ss_pred             CCCCCCCCeeecccCCCCCchHHHHHHHhhh---CCeEEEEecCccEEEecchHHHHHHHHhCCcccCCCCCCccccccc
Q 011477           32 PPSPPSLPIIGHFHLLKMPMSQTLTNLCNKY---GPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEK  108 (485)
Q Consensus        32 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~ky---G~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~  108 (485)
                      +|||+++|++||+..+..+ ...+.+|.++|   |+++++++|+.+.++++||+.+++|+.++...|.+.+.....  ..
T Consensus        32 ~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~--~~  108 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSY--ME  108 (516)
T ss_pred             cCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHH--HH
Confidence            6999999999998765334 34567778787   899999999999999999999999998764455443322111  11


Q ss_pred             cccccccccCCChhHHHHHHHHHHhhcchhhhhhhhhhH-HHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHH
Q 011477          109 EKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIR-TEEIRFMAKHLFQSSFKDVQKVDVKSLLYKLDFNIVIRMV  187 (485)
Q Consensus       109 ~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~-~~~~~~~~~~l~~~~~~~~~~vd~~~~~~~~~~~~i~~~~  187 (485)
                      ...+.++++.+|+.|+++|+.++ +.|+.++++.+.+.+ .+.++.+.+.+.....++ +.+|+.+++..+++|+++.++
T Consensus       109 ~~~g~~l~~~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~-~~vd~~~~~~~~~~dvi~~~~  186 (516)
T PLN03195        109 VLLGDGIFNVDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQASFAN-QVVDMQDLFMRMTLDSICKVG  186 (516)
T ss_pred             HHhcCeeeccCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CeEcHHHHHHHHHHHHHHHHH
Confidence            01123466778999999999998 789999999999876 555677777675543233 579999999999999999999


Q ss_pred             hcCccCcccccchhHHHHHHHHHHhhhccccCCCccccccc--cc-cccccchHHHHHHHHHHHHHHHHHHHHHHHhhc-
Q 011477          188 AGKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFPF--LR-WFTFYGAEQKIRKLRRKRDDFAQALLDEQRKAD-  263 (485)
Q Consensus       188 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-  263 (485)
                      ||.++...+....  ...+.+.++..........   ..|+  +. ++. ....+...+..+.+.+++.+.++++++.. 
T Consensus       187 fG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  260 (516)
T PLN03195        187 FGVEIGTLSPSLP--ENPFAQAFDTANIIVTLRF---IDPLWKLKKFLN-IGSEALLSKSIKVVDDFTYSVIRRRKAEMD  260 (516)
T ss_pred             hCCCccccccCCC--ccHHHHHHHHHHHHHHHHH---hcchhhHHHhcc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9998854321100  1122222222211100000   1121  11 111 11223445566777788888887765431 


Q ss_pred             ------CCCCCcHHHHHhcccccCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCC-
Q 011477          264 ------RKIVPTLIDSLLKLQESEPEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDKHVGL-  336 (485)
Q Consensus       264 ------~~~~~dll~~ll~~~~~~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~~~~~-  336 (485)
                            +....|+++.+++..++.++.++++++.+++.++++||+|||+++++|++|+|++||++|+||++|++++.+. 
T Consensus       261 ~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~  340 (516)
T PLN03195        261 EARKSGKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKER  340 (516)
T ss_pred             ccccccccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcc
Confidence                  1235689999997654434459999999999999999999999999999999999999999999999987642 


Q ss_pred             -------------------CCCCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccc-cceeeCCCCEEEeechh
Q 011477          337 -------------------SRLIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTV-GGYHVPGGTQLLINVWS  396 (485)
Q Consensus       337 -------------------~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~-~g~~Ip~g~~v~~~~~~  396 (485)
                                         +..++.+++++||||+|||+||||++|+++... |.+.+|..+ +||.|||||.|.+++++
T Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~-r~~~~d~~~~~G~~IpkGt~V~~~~~~  419 (516)
T PLN03195        341 AKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDP-KGILEDDVLPDGTKVKAGGMVTYVPYS  419 (516)
T ss_pred             cccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchh-hhhccCcCcCCCcEECCCCEEEEehHh
Confidence                               235788999999999999999999999999986 656666554 99999999999999999


Q ss_pred             hccCCCCC-CCCCCCCCCCccCccc--ccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCCC
Q 011477          397 VHMDPELW-EDPDKFKPERFLMCEE--EQVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEERP  467 (485)
Q Consensus       397 ~~~d~~~~-~~p~~F~P~Rf~~~~~--~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~  467 (485)
                      +||||++| +||++|+||||++.+.  ...+..|+|||+|+|+|+|++||++|++++++.|+++|++++.++.+
T Consensus       420 ~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~  493 (516)
T PLN03195        420 MGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHP  493 (516)
T ss_pred             hccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCc
Confidence            99999999 9999999999996432  23456799999999999999999999999999999999999876653


No 23 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.2e-72  Score=544.89  Aligned_cols=417  Identities=18%  Similarity=0.297  Sum_probs=318.9

Q ss_pred             CCCCCCCCeeecccCCC-C--CchHHHHHHHhhhCCeEE---EEecCccEEEecchHHHHHHHHhCCcccCCCCCCcccc
Q 011477           32 PPSPPSLPIIGHFHLLK-M--PMSQTLTNLCNKYGPILL---LQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRG  105 (485)
Q Consensus        32 ppgp~~~p~~G~~~~~~-~--~~~~~~~~~~~kyG~v~~---~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~~~~~~~  105 (485)
                      .|||+++|++||+..+. .  ...+++.+..++||..++   .++|+.++++|+||+.+++|+.++...|.+.+..... 
T Consensus        33 ~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~-  111 (500)
T PLN02169         33 QPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI-  111 (500)
T ss_pred             CCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH-
Confidence            48999999999987662 2  233444555555886655   5778999999999999999999876666654332211 


Q ss_pred             ccccccccccccCCChhHHHHHHHHHHhhcchhhhhh--hhhhHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHH
Q 011477          106 QEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLL--SANIRTEEIRFMAKHLFQSSFKDVQKVDVKSLLYKLDFNIV  183 (485)
Q Consensus       106 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~--~~~~~~~~~~~~~~~l~~~~~~~~~~vd~~~~~~~~~~~~i  183 (485)
                        ....+.+++..+|+.|+.+||.++ +.|+..++..  +.+.+.++++.+++.+.+...++ ..+|+.+.+.++++|++
T Consensus       112 --~~~~g~gl~~~~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~vd~~~~~~~~t~dvi  187 (500)
T PLN02169        112 --FDVLGEGILTVDFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHEN-IIIDLQDVFMRFMFDTS  187 (500)
T ss_pred             --HHhhcCcccccCcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CeEeHHHHHHHHHHHHH
Confidence              111234677778999999999998 8999987764  34667777888888886544333 57999999999999999


Q ss_pred             HHHHhcCccCcccccchhHHHHHHHHHHhhhccccCCCccccccccc-----cccccchHHHHHHHHHHHHHHHHHHHHH
Q 011477          184 IRMVAGKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFPFLR-----WFTFYGAEQKIRKLRRKRDDFAQALLDE  258 (485)
Q Consensus       184 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~  258 (485)
                      ++++||.+.+..+..  ....++.+.+........   ...+.|++.     +++ ....++..++.+.+.+++.+.+++
T Consensus       188 ~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~I~~  261 (500)
T PLN02169        188 SILMTGYDPMSLSIE--MLEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWIG-IGLERKMRTALATVNRMFAKIISS  261 (500)
T ss_pred             HhheeCCCccccCCC--CCCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhC-CchhhHHHHHHHHHHHHHHHHHHH
Confidence            999999987543211  111122222222211110   111223221     111 223456778888899999998888


Q ss_pred             HHhhc------CCCCCcHHHHHhcccccC---CCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHH
Q 011477          259 QRKAD------RKIVPTLIDSLLKLQESE---PEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDE  329 (485)
Q Consensus       259 ~~~~~------~~~~~dll~~ll~~~~~~---~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~E  329 (485)
                      +++..      ++...|+++.+++.....   ++.++++++.+++.++++||+|||+++++|++|+|++||++|+|+++|
T Consensus       262 r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~E  341 (500)
T PLN02169        262 RRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHE  341 (500)
T ss_pred             HHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence            76531      112368999999764321   224789999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCc-ccccceeeCCCCEEEeechhhccCCCCC-CCC
Q 011477          330 IDKHVGLSRLIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEE-CTVGGYHVPGGTQLLINVWSVHMDPELW-EDP  407 (485)
Q Consensus       330 i~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~-~~~~g~~Ip~g~~v~~~~~~~~~d~~~~-~~p  407 (485)
                      |++++      +.+|+++||||+|||+||||+||+++... |.+.+| +.++||.||||+.|++++|++||||++| +||
T Consensus       342 i~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP  414 (500)
T PLN02169        342 INTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDA  414 (500)
T ss_pred             HHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCCh
Confidence            99874      56899999999999999999999999997 665555 4459999999999999999999999999 899


Q ss_pred             CCCCCCCccCcccc---cCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCC
Q 011477          408 DKFKPERFLMCEEE---QVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEER  466 (485)
Q Consensus       408 ~~F~P~Rf~~~~~~---~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~  466 (485)
                      ++||||||++++..   ..+..|+|||+|+|+|+|++||++|+++++++|+++|+|++.++.
T Consensus       415 ~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~  476 (500)
T PLN02169        415 LDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH  476 (500)
T ss_pred             hhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC
Confidence            99999999976432   236789999999999999999999999999999999999987664


No 24 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=4.4e-71  Score=528.80  Aligned_cols=437  Identities=21%  Similarity=0.306  Sum_probs=334.1

Q ss_pred             ChhhHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCeeecccCCC-----CCchHHHHHHHhhhCCeEEEEecCccE
Q 011477            1 MDALHYLGLLVSILLIVYQHIRRNKIQPKNLPPSPPSLPIIGHFHLLK-----MPMSQTLTNLCNKYGPILLLQVGSRPT   75 (485)
Q Consensus         1 m~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~~~~~~   75 (485)
                      |.+.+.+.+++++.++...+..+.+....+.||||.++|++||+.++.     .++..++.+++++||++++++++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~   80 (472)
T PLN02987          1 MAFSAFLLLLSSLAAIFFLLLRRTRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPT   80 (472)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhhccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCe
Confidence            444444554444444444444444445556889999999999998762     446888999999999999999999999


Q ss_pred             EEecchHHHHHHHHhCCcccCCCCCCccccccccccccccccCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHH
Q 011477           76 LVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMA  155 (485)
Q Consensus        76 v~i~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~  155 (485)
                      ++++||+++++++.+++..|.++.........+   ..+++..+|+.|+++|+++. +.++.+.++.+.   .+++.+++
T Consensus        81 vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~lg---~~~l~~~~g~~wr~~R~~~~-~f~~~~~~~~~~---~~~~~~~~  153 (472)
T PLN02987         81 VFSADPETNRFILQNEGKLFECSYPGSISNLLG---KHSLLLMKGNLHKKMHSLTM-SFANSSIIKDHL---LLDIDRLI  153 (472)
T ss_pred             EEEeCHHHHHHHHhCCCceEEecCcHHHHHHhC---cccccccCcHHHHHHHHHHH-HhcChHHHHHHH---HHHHHHHH
Confidence            999999999999998877775443222222222   13455668999999999986 444544554432   22233333


Q ss_pred             HHHHhhccCCCCcccHHHHHHHHHHHHHHHHHhcCccCcccccchhHHHHHHHHHHhhhccccCCCcccccccccccccc
Q 011477          156 KHLFQSSFKDVQKVDVKSLLYKLDFNIVIRMVAGKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFPFLRWFTFY  235 (485)
Q Consensus       156 ~~l~~~~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~  235 (485)
                      +.......   +++++.+.+++++++++++++||.+....       ...+.+.+.......    ....+|++     .
T Consensus       154 ~~~~~~~~---~~v~~~~~~~~~t~~vi~~~~fg~~~~~~-------~~~~~~~~~~~~~~~----~~~~~p~l-----~  214 (472)
T PLN02987        154 RFNLDSWS---SRVLLMEEAKKITFELTVKQLMSFDPGEW-------TESLRKEYVLVIEGF----FSVPLPLF-----S  214 (472)
T ss_pred             HHHHHhhc---cceehHHHHHHHHHHHHHHHHcCCCChHH-------HHHHHHHHHHHHhhh----hcCCCcCC-----C
Confidence            32222221   46999999999999999999999876321       112222222221111    11224443     1


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhc--C-CCCCcHHHHHhcccccCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHH
Q 011477          236 GAEQKIRKLRRKRDDFAQALLDEQRKAD--R-KIVPTLIDSLLKLQESEPEFYNDNVIKGIVQALLIAGPHTTVTTMELV  312 (485)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~-~~~~dll~~ll~~~~~~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~  312 (485)
                      ...++..++.+.+.+++.+.++++++..  + +...|+++.+++..+    .++++++.+++..+++||+|||+++++|+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~----~~~~~ei~~~~~~l~~Ag~~tta~~l~~~  290 (472)
T PLN02987        215 TTYRRAIQARTKVAEALTLVVMKRRKEEEEGAEKKKDMLAALLASDD----GFSDEEIVDFLVALLVAGYETTSTIMTLA  290 (472)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcccccHHHHHHhcCC----CCCHHHHHHHHHHHHHhccchHHHHHHHH
Confidence            2335677788889999999998876642  1 235799999997642    38999999999999999999999999999


Q ss_pred             HHHHhhChHHHHHHHHHHHHhcC---CCCCCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCE
Q 011477          313 VSRMITHSEVFKTARDEIDKHVG---LSRLIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQ  389 (485)
Q Consensus       313 l~~L~~~p~~~~klr~Ei~~~~~---~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~  389 (485)
                      +++|++||++|+++++|++++.+   .+..++.+++++|||++||++||||++|+++.. +|++.+|++++||.||||+.
T Consensus       291 l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~-~R~~~~d~~~~G~~ip~Gt~  369 (472)
T PLN02987        291 VKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI-FRRAMTDIEVKGYTIPKGWK  369 (472)
T ss_pred             HHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc-cccCCCCeeECCEEECCCCE
Confidence            99999999999999999999874   234578899999999999999999999999865 59999999999999999999


Q ss_pred             EEeechhhccCCCCCCCCCCCCCCCccCccc-ccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCCCe
Q 011477          390 LLINVWSVHMDPELWEDPDKFKPERFLMCEE-EQVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEERPF  468 (485)
Q Consensus       390 v~~~~~~~~~d~~~~~~p~~F~P~Rf~~~~~-~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~  468 (485)
                      |+++.+.+|+||++|+||++||||||++.+. ...+..|+|||+|+|.|+|++||..|++++++.|+++|+|++.++.++
T Consensus       370 v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~  449 (472)
T PLN02987        370 VFASFRAVHLDHEYFKDARTFNPWRWQSNSGTTVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKL  449 (472)
T ss_pred             EEEehHHhhCCcccCCCccccCcccCCCCCCCCCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCce
Confidence            9999999999999999999999999997543 223468999999999999999999999999999999999999887743


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.4e-71  Score=533.86  Aligned_cols=409  Identities=20%  Similarity=0.283  Sum_probs=324.1

Q ss_pred             CCCCCCCCCCCCCeeecccCC-----CCCchHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHhCCcccCCCCCC
Q 011477           27 QPKNLPPSPPSLPIIGHFHLL-----KMPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLL  101 (485)
Q Consensus        27 ~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~~~  101 (485)
                      +++++||||.++|++||++.+     ..+++.++.+++++||+||++++|++++++++||+++++++.+++..|..+...
T Consensus         4 ~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~   83 (452)
T PLN03141          4 KKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPK   83 (452)
T ss_pred             CCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCch
Confidence            455789999999999999887     245688999999999999999999999999999999999999887767544221


Q ss_pred             ccccccccccccccccCCChhHHHHHHHHHHhhcchhhhhh-hhhhHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHH
Q 011477          102 PSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLL-SANIRTEEIRFMAKHLFQSSFKDVQKVDVKSLLYKLDF  180 (485)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~~vd~~~~~~~~~~  180 (485)
                      ......+   .++++..+|+.|+++|++++ +.|+..++.. ..+.+.+.++++++.+.    ++ +.+|+.+.+..+++
T Consensus        84 ~~~~l~g---~~~~~~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~  154 (452)
T PLN03141         84 SLTELMG---KSSILLINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSWR----DD-PPVLVQDETKKIAF  154 (452)
T ss_pred             hHHHHhC---cccccccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhcc----CC-CCEEhHHHHHHHHH
Confidence            1111221   13466778999999999998 6788777765 34555555555555442    22 57999999999999


Q ss_pred             HHHHHHHhcCccCcccccchhHHHHHHHHHHhhhccccCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 011477          181 NIVIRMVAGKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFPFLRWFTFYGAEQKIRKLRRKRDDFAQALLDEQR  260 (485)
Q Consensus       181 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  260 (485)
                      +++++++||.+...       ...++.+.+.........  +...+|..      .. .+..++.+.+.+++...+++++
T Consensus       155 ~vi~~~~~G~~~~~-------~~~~~~~~~~~~~~~~~~--~~~~~p~~------~~-~~~~~~~~~l~~~~~~~i~~~~  218 (452)
T PLN03141        155 EVLVKALISLEPGE-------EMEFLKKEFQEFIKGLMS--LPIKLPGT------RL-YRSLQAKKRMVKLVKKIIEEKR  218 (452)
T ss_pred             HHHHHHHcCCCchH-------HHHHHHHHHHHHhhhHHh--CccCCCch------Hh-HHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999987522       222333333322221110  11112211      11 3344667888888888888776


Q ss_pred             hhc-CC------CCCcHHHHHhcccccCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHh
Q 011477          261 KAD-RK------IVPTLIDSLLKLQESEPEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDKH  333 (485)
Q Consensus       261 ~~~-~~------~~~dll~~ll~~~~~~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~~  333 (485)
                      +.. ..      ...|+++.+++..   +..++++++..++..+++||+|||+++++|++++|++||++|+++++|++++
T Consensus       219 ~~~~~~~~~~~~~~~d~l~~ll~~~---~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~  295 (452)
T PLN03141        219 RAMKNKEEDETGIPKDVVDVLLRDG---SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKL  295 (452)
T ss_pred             HHHhccCccccCChhhHHHHHHhcC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence            542 11      1468999999764   2348999999999999999999999999999999999999999999999987


Q ss_pred             cC----CCCCCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhhccCCCCCCCCCC
Q 011477          334 VG----LSRLIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSVHMDPELWEDPDK  409 (485)
Q Consensus       334 ~~----~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~  409 (485)
                      .+    .+..++.+++.+|||++|||+|++|++|+++.. +|.+.+|++++||.||||+.|+++.+.+|+||++|+||++
T Consensus       296 ~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~-~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~  374 (452)
T PLN03141        296 KRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGV-MRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQ  374 (452)
T ss_pred             HhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCc-ceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccc
Confidence            53    234578899999999999999999999999765 6999999999999999999999999999999999999999


Q ss_pred             CCCCCccCcccccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCC
Q 011477          410 FKPERFLMCEEEQVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEER  466 (485)
Q Consensus       410 F~P~Rf~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~  466 (485)
                      |+||||++.+  ..+..|+|||+|+|.|+|++||.+|+++++|.|+++|+|++.++.
T Consensus       375 F~PeRfl~~~--~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~  429 (452)
T PLN03141        375 FNPWRWQEKD--MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT  429 (452)
T ss_pred             cCcccccCCC--CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC
Confidence            9999999764  246789999999999999999999999999999999999987764


No 26 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=3.4e-71  Score=541.75  Aligned_cols=411  Identities=22%  Similarity=0.327  Sum_probs=318.6

Q ss_pred             eecccCC-CCCchHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHhCCcccCCCCCCccccccccccccccccCC
Q 011477           41 IGHFHLL-KMPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPY  119 (485)
Q Consensus        41 ~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (485)
                      .|++..+ +..+...+.+++++|||||++++|++++++|+||+.+++|+..+...|.+++........   ...+++..+
T Consensus       142 ~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~---~g~~l~~~d  218 (633)
T PLN02738        142 KGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFV---MGKGLIPAD  218 (633)
T ss_pred             cCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhc---cCCceecCC
Confidence            3444444 444678899999999999999999999999999999999999876667655332111111   122456778


Q ss_pred             ChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHhcCccCcccccc
Q 011477          120 GEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSFKDVQKVDVKSLLYKLDFNIVIRMVAGKRCFEEDEMN  199 (485)
Q Consensus       120 g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~  199 (485)
                      |+.|+.+|+.++ +.|+.+++..+++.+.+.++.+++.+.+...++ +.+|+.+.+..+++|+|+.++||.+++..... 
T Consensus       219 ge~wr~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g-~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~-  295 (633)
T PLN02738        219 GEIWRVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAAASDG-EDVEMESLFSRLTLDIIGKAVFNYDFDSLSND-  295 (633)
T ss_pred             cHHHHHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CcEeHHHHHHHHHHHHHHHHHhCCCccccccc-
Confidence            999999999999 899999999999999999999999998765444 68999999999999999999999998643211 


Q ss_pred             hhHHHHHHHHHHhhhccccCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhh------------cCCCC
Q 011477          200 TDIAKDKLDELNQTFTPLMPTALGDYFPFLRWFTFYGAEQKIRKLRRKRDDFAQALLDEQRKA------------DRKIV  267 (485)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------------~~~~~  267 (485)
                      ......+.+.+...............+|.+..++  ...++..+..+.+.++..+.++.+++.            .....
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~--~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~  373 (633)
T PLN02738        296 TGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDIS--PRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERD  373 (633)
T ss_pred             hHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhccccccc
Confidence            2222233333332211111111111122222221  112334444455555555554433221            01234


Q ss_pred             CcHHHHHhcccccCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCCCCcccccC
Q 011477          268 PTLIDSLLKLQESEPEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDKHVGLSRLIEDADLVN  347 (485)
Q Consensus       268 ~dll~~ll~~~~~~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~~~~~~~~~~~~~l~~  347 (485)
                      .|+++.+++..    +.++++++.+++..+++||+|||+++++|++|+|++||++|+|||+|++++++ +..++++++++
T Consensus       374 ~dil~~Ll~~~----~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-~~~~t~edL~k  448 (633)
T PLN02738        374 PSILHFLLASG----DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-DRFPTIEDMKK  448 (633)
T ss_pred             chHHHHHHHcC----CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-CCCCCHHHHcc
Confidence            58999998753    24899999999999999999999999999999999999999999999999988 46789999999


Q ss_pred             CchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhhccCCCCCCCCCCCCCCCccCccc----ccC
Q 011477          348 LPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSVHMDPELWEDPDKFKPERFLMCEE----EQV  423 (485)
Q Consensus       348 l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~Rf~~~~~----~~~  423 (485)
                      ||||+|||+|+||++|+++... |.+.+|.+++||.|||||.|.++.|.+||||++||||++||||||+..+.    ...
T Consensus       449 LPYL~AVIkEtLRL~p~~p~~~-R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~  527 (633)
T PLN02738        449 LKYTTRVINESLRLYPQPPVLI-RRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQ  527 (633)
T ss_pred             CHHHHHHHHHHHhcCCCccccc-eeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCC
Confidence            9999999999999999999975 88999999999999999999999999999999999999999999985321    234


Q ss_pred             CCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCC
Q 011477          424 GCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEE  465 (485)
Q Consensus       424 ~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~  465 (485)
                      ...|+|||.|+|+|+|++||++|+++++|+|+++|+|++.++
T Consensus       528 ~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~  569 (633)
T PLN02738        528 NFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPG  569 (633)
T ss_pred             CCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCC
Confidence            578999999999999999999999999999999999998765


No 27 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.6e-71  Score=487.43  Aligned_cols=417  Identities=20%  Similarity=0.295  Sum_probs=333.9

Q ss_pred             CCCCCCCCCCeeecccCCCCCchHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHhCCcccCCCCCCcccccccc
Q 011477           30 NLPPSPPSLPIIGHFHLLKMPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKE  109 (485)
Q Consensus        30 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~  109 (485)
                      .+|-.-.|+||+|++..+++++..++++.++|||+||++.++|+.+.++.||+....++.++...++............+
T Consensus        32 ~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~vF  111 (486)
T KOG0684|consen   32 EPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPVF  111 (486)
T ss_pred             CCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhhc
Confidence            44444458999999999999999999999999999999999999999999999999999887433322211111111111


Q ss_pred             ccccccccCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHH-HHhhccCCCCcccHHHHHHHHHHHHHHHHHh
Q 011477          110 KIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKH-LFQSSFKDVQKVDVKSLLYKLDFNIVIRMVA  188 (485)
Q Consensus       110 ~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~-l~~~~~~~~~~vd~~~~~~~~~~~~i~~~~f  188 (485)
                      + .+......+....++.+.+. ..+...+++++.+.|.+++++.++. +.+    ++....+...+...++.+.-.++|
T Consensus       112 g-~~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~~----s~~~d~l~~~~~~ii~tAs~~ll~  185 (486)
T KOG0684|consen  112 G-KGVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLGE----SGETDGLYTFCRLIIFTASRLLLG  185 (486)
T ss_pred             C-CCccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhccccc----ccchhHhhhhhHHHhhhhHHHhhh
Confidence            1 12444556677778888887 6899999999999999999999887 322    334455666666666666666667


Q ss_pred             cCccCcccccchhHHHHHHHHHHhhhccccCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 011477          189 GKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFPFLRWFTFYGAEQKIRKLRRKRDDFAQALLDEQRKADRKIVP  268 (485)
Q Consensus       189 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  268 (485)
                      |+.....    +.....+...++..+..     +...||.  +++... .++..++++.+.+.+...+.+++++......
T Consensus       186 ~e~r~~~----d~~~a~l~~dLd~~F~~-----~d~~FP~--~LP~~~-~r~~~ra~~~i~k~f~~~i~~rr~s~s~~~~  253 (486)
T KOG0684|consen  186 GEVRDQL----DADVAKLYHDLDQGFQP-----FDFLFPY--NLPIPL-LRRRDRARKKISKIFSKIILDRRASISKWDN  253 (486)
T ss_pred             hhhhhhh----cchHHHHHHHHhccccc-----hHhhccc--CCCcch-hhhHHHHHHHHHHHHHHHHHHHHhccccccH
Confidence            7765432    12223334444433332     3334562  222222 3455688999999999999999998666777


Q ss_pred             cHHHHHhcccccCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCC-CCcccccC
Q 011477          269 TLIDSLLKLQESEPEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDKHVGLSRL-IEDADLVN  347 (485)
Q Consensus       269 dll~~ll~~~~~~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~~~~~~~~-~~~~~l~~  347 (485)
                      |+++.+++ ...++.+.+++|++..++.++|||+.||+.|.+|++++|++|||+++++++|+.+++|.... ++.+.+++
T Consensus       254 dmlq~l~~-~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~  332 (486)
T KOG0684|consen  254 DMLQSLME-KYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKD  332 (486)
T ss_pred             HHHHHHHH-HhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhc
Confidence            99999998 55566679999999999999999999999999999999999999999999999999987654 99999999


Q ss_pred             CchHHHHHHHHhccccCcccCCCCCCCCcccccc----eeeCCCCEEEeechhhccCCCCCCCCCCCCCCCccCcccc--
Q 011477          348 LPYLHCTINETLRLDQVVRVLPPHESSEECTVGG----YHVPGGTQLLINVWSVHMDPELWEDPDKFKPERFLMCEEE--  421 (485)
Q Consensus       348 l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g----~~Ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~Rf~~~~~~--  421 (485)
                      ||.|++||+|||||+||.+..+ |.+.+|.++.+    |.||+|..|+++++.+|+||++|+||++|+||||++++.+  
T Consensus       333 lplL~~~IkEtLRL~~p~~~~~-R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~  411 (486)
T KOG0684|consen  333 LPLLDSCIKETLRLHPPAHSLM-RKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESK  411 (486)
T ss_pred             chHHHHHHHHHHhcCCchhhHH-HhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccc
Confidence            9999999999999999998886 99999999966    9999999999999999999999999999999999976642  


Q ss_pred             ----cCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCC
Q 011477          422 ----QVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEER  466 (485)
Q Consensus       422 ----~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~  466 (485)
                          ..++.|||||+|.|.|||++||.+|+|.++..+|+.||+++.+|.
T Consensus       412 k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~  460 (486)
T KOG0684|consen  412 KNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGP  460 (486)
T ss_pred             cccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCC
Confidence                234667999999999999999999999999999999999999964


No 28 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.4e-70  Score=535.03  Aligned_cols=411  Identities=23%  Similarity=0.331  Sum_probs=327.8

Q ss_pred             CCCCCCCCCCCCCeeecccCC-----CCCchHHHHHHHhhhCC--eEEEEecCccEEEecchHHHHHHHHhCCcccCCCC
Q 011477           27 QPKNLPPSPPSLPIIGHFHLL-----KMPMSQTLTNLCNKYGP--ILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRP   99 (485)
Q Consensus        27 ~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~--v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~   99 (485)
                      ...+.||||+++|++|++..+     ..+++.++.+++++||+  ++++++++.+.++++||+++++++.+++ .|.+..
T Consensus        39 ~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~~~  117 (490)
T PLN02302         39 GQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEPGW  117 (490)
T ss_pred             CCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-ccccCC
Confidence            444689999999999998876     23568899999999997  7899999999999999999999998764 454332


Q ss_pred             CCccccccccccccccccCCChhHHHHHHHHHHhhc-chhhhhhhhhhHHHHHHHHHHHHHhhccCCCCcccHHHHHHHH
Q 011477          100 LLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIF-SPRRLLLSANIRTEEIRFMAKHLFQSSFKDVQKVDVKSLLYKL  178 (485)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f-~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vd~~~~~~~~  178 (485)
                      ........  + ...+...+|+.|+++|+.++ +.| ++++++.+.+.+.+.++++++.+...     +.+|+.+.+..+
T Consensus       118 ~~~~~~~~--g-~~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~~-----~~v~~~~~~~~~  188 (490)
T PLN02302        118 PESTVELI--G-RKSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSKM-----GEIEFLTELRKL  188 (490)
T ss_pred             chhHHHHh--c-cccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcCC-----CCEehHHHHHHH
Confidence            21111111  1 12345568999999999999 677 57889999999999999999988431     469999999999


Q ss_pred             HHHHHHHHHhcCccCcccccchhHHHHHHHHHHhhhccccCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 011477          179 DFNIVIRMVAGKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFPFLRWFTFYGAEQKIRKLRRKRDDFAQALLDE  258 (485)
Q Consensus       179 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  258 (485)
                      +++++++++||.+....       ..++...+........  .....+|..       ...+..++.+.+.+++.+.+++
T Consensus       189 ~~~vi~~~~~G~~~~~~-------~~~~~~~~~~~~~~~~--~~~~~~p~~-------~~~~~~~~~~~l~~~~~~~i~~  252 (490)
T PLN02302        189 TFKIIMYIFLSSESELV-------MEALEREYTTLNYGVR--AMAINLPGF-------AYHRALKARKKLVALFQSIVDE  252 (490)
T ss_pred             HHHHHHHHHcCCCChHH-------HHHHHHHHHHHHHHhh--hCCcCCCch-------hhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999876321       1222222221111100  011112221       1123344566777777777777


Q ss_pred             HHhhc----CCCCCcHHHHHhcccccCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhc
Q 011477          259 QRKAD----RKIVPTLIDSLLKLQESEPEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDKHV  334 (485)
Q Consensus       259 ~~~~~----~~~~~dll~~ll~~~~~~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~~~  334 (485)
                      +++..    .....|+++.+++..++++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+++++
T Consensus       253 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~  332 (490)
T PLN02302        253 RRNSRKQNISPRKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIA  332 (490)
T ss_pred             HHHhhhccCCCCcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            65541    12457999999987655555689999999999999999999999999999999999999999999999998


Q ss_pred             CCC----CCCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhhccCCCCCCCCCCC
Q 011477          335 GLS----RLIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSVHMDPELWEDPDKF  410 (485)
Q Consensus       335 ~~~----~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~F  410 (485)
                      +..    ..++.+++++|||++|||+|+||++|+++.. +|.+.+|++++||.||||+.|.++.+.+||||++|+||++|
T Consensus       333 ~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F  411 (490)
T PLN02302        333 KKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEF  411 (490)
T ss_pred             hcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCcccc
Confidence            642    2378899999999999999999999999887 49999999999999999999999999999999999999999


Q ss_pred             CCCCccCcccccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCC
Q 011477          411 KPERFLMCEEEQVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEER  466 (485)
Q Consensus       411 ~P~Rf~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~  466 (485)
                      +||||++.+  ..+..|+|||+|+|.|+|++||..|++++++.|+++|+|++.++.
T Consensus       412 ~PeR~~~~~--~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~  465 (490)
T PLN02302        412 DPSRWDNYT--PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG  465 (490)
T ss_pred             ChhhcCCCC--CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC
Confidence            999999754  346789999999999999999999999999999999999987653


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=3.8e-69  Score=520.69  Aligned_cols=420  Identities=21%  Similarity=0.328  Sum_probs=331.2

Q ss_pred             CCCCCCCCCeeecccCC-----CCCchHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHhCCcccCCCCCCcccc
Q 011477           31 LPPSPPSLPIIGHFHLL-----KMPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRG  105 (485)
Q Consensus        31 ~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~~~~~~~  105 (485)
                      .=.|-.|||.+|+.+..     +...+..+.+|+++||+++++++|+.++++++||+++++|+.+.+..|.+++......
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~   92 (489)
T PLN02936         13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSE   92 (489)
T ss_pred             cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhH
Confidence            34567799999998887     4556889999999999999999999999999999999999988666676554322211


Q ss_pred             ccccccccccccCCChhHHHHHHHHHHhhcchhhhhhhhh-hHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHH
Q 011477          106 QEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSAN-IRTEEIRFMAKHLFQSSFKDVQKVDVKSLLYKLDFNIVI  184 (485)
Q Consensus       106 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~-~~~~~~~~~~~~l~~~~~~~~~~vd~~~~~~~~~~~~i~  184 (485)
                      ..   .+.+++..+|+.|+++|+.++ +.|+.+++..+.+ .+.++++.+++.+.+...++ .++|+.++++.+++|+++
T Consensus        93 ~~---~~~~i~~~~g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g-~~vd~~~~~~~~~~dvi~  167 (489)
T PLN02936         93 FL---FGSGFAIAEGELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSG-EAVNMEAKFSQLTLDVIG  167 (489)
T ss_pred             HH---hcCccccCCchHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CceeHHHHHHHHHHHHHH
Confidence            11   123566678999999999999 7999988887654 77888999999997664433 689999999999999999


Q ss_pred             HHHhcCccCcccccchhHHHHHHHHHHhhhccccCCCcccccccccc--cc-ccchHHHHHHHHHHHHHHHHHHHHHHHh
Q 011477          185 RMVAGKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFPFLRW--FT-FYGAEQKIRKLRRKRDDFAQALLDEQRK  261 (485)
Q Consensus       185 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~--~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (485)
                      .++||.+++..+. ..+....+...+.....     .....+|++..  +. .....++..++.+.+.+++.+.++++++
T Consensus       168 ~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~  241 (489)
T PLN02936        168 LSVFNYNFDSLTT-DSPVIQAVYTALKEAET-----RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKE  241 (489)
T ss_pred             HHHcCCCcccccc-CcHHHHHHHHHHHHHHH-----hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999865421 11222222222221111     11112333210  00 0112345566677777777777766543


Q ss_pred             h----c---------CCCCCcHHHHHhcccccCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHH
Q 011477          262 A----D---------RKIVPTLIDSLLKLQESEPEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARD  328 (485)
Q Consensus       262 ~----~---------~~~~~dll~~ll~~~~~~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~  328 (485)
                      .    .         .+...|+++.+++..+    .++++++.+++..+++||+|||+++++|++|+|++||++|+|+|+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~----~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~  317 (489)
T PLN02936        242 IVEAEGEVIEGEEYVNDSDPSVLRFLLASRE----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQE  317 (489)
T ss_pred             HHhhcccccccccccccCchHHHHHHHhccc----cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            2    0         0124679999987542    389999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEeechhhccCCCCCCCCC
Q 011477          329 EIDKHVGLSRLIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLINVWSVHMDPELWEDPD  408 (485)
Q Consensus       329 Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~  408 (485)
                      |++++++. ..++.+++++||||+|||+||||++|+++...+|.+.+|+.++||.||+|+.|+++.+.+||||++|+||+
T Consensus       318 Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~  396 (489)
T PLN02936        318 ELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAE  396 (489)
T ss_pred             HHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCcc
Confidence            99999874 45788999999999999999999999999988777788888899999999999999999999999999999


Q ss_pred             CCCCCCccCccc----ccCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCCC
Q 011477          409 KFKPERFLMCEE----EQVGCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEER  466 (485)
Q Consensus       409 ~F~P~Rf~~~~~----~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~  466 (485)
                      +|+||||++.+.    ...+..|+|||.|+|.|||++||++|+++++++|+++|++++++++
T Consensus       397 ~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~  458 (489)
T PLN02936        397 EFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQ  458 (489)
T ss_pred             ccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCC
Confidence            999999996542    1224589999999999999999999999999999999999988765


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.1e-67  Score=509.32  Aligned_cols=413  Identities=17%  Similarity=0.222  Sum_probs=319.8

Q ss_pred             CCCeeecccCCCCCchHHHHHHHhhhC-CeEEEEecCccEEEecchHHHHHHHHhCCcccCCCCCCcccccccccccccc
Q 011477           37 SLPIIGHFHLLKMPMSQTLTNLCNKYG-PILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSI  115 (485)
Q Consensus        37 ~~p~~G~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~v~i~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (485)
                      ..++.|++.....+....+..+.++++ .+++++..+.  ++++||+++++|+.++...|.+......  ......+.++
T Consensus        48 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~--~~~~~~g~gi  123 (502)
T PLN02426         48 RAYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSA--ILGDLLGRGI  123 (502)
T ss_pred             CCCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHH--HHHHhcCCce
Confidence            356888887754445777777888887 5777776554  8999999999999887556654432211  1111112457


Q ss_pred             ccCCChhHHHHHHHHHHhhcchhhhhhhh--hhHHHHHHHHHHHHHhhccCC-CCcccHHHHHHHHHHHHHHHHHhcCcc
Q 011477          116 GAPYGEHWRNLRRVYALEIFSPRRLLLSA--NIRTEEIRFMAKHLFQSSFKD-VQKVDVKSLLYKLDFNIVIRMVAGKRC  192 (485)
Q Consensus       116 ~~~~g~~~~~~R~~~~~~~f~~~~l~~~~--~~~~~~~~~~~~~l~~~~~~~-~~~vd~~~~~~~~~~~~i~~~~fG~~~  192 (485)
                      ++.+|+.|+.+||.++ +.|+.++++.+.  +.+.+..+.+++.+.+...++ ++.+|+.++++++++|+++.++||.++
T Consensus       124 ~~~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~  202 (502)
T PLN02426        124 FNVDGDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDP  202 (502)
T ss_pred             eecCcHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCC
Confidence            7788999999999998 899999988763  677777778888876543222 257999999999999999999999998


Q ss_pred             CcccccchhHHHHHHHHHHhhhccccCCCcccccccc----ccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 011477          193 FEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFPFL----RWFTFYGAEQKIRKLRRKRDDFAQALLDEQRKADRKIVP  268 (485)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  268 (485)
                      +..+..  ....++.+.++........ .....+|++    .+++ .+..++..++.+.+.+++.+.++++++...+...
T Consensus       203 ~~l~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~  278 (502)
T PLN02426        203 GCLELS--LPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLN-IGSERKLKEAIKLVDELAAEVIRQRRKLGFSASK  278 (502)
T ss_pred             cccCCC--CCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcc-cchhHHHHHHHHHHHHHHHHHHHHHHhcccCCcc
Confidence            654311  1112233333322211100 001112322    1121 1233567778888999999999988765333467


Q ss_pred             cHHHHHhcccccCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCC-CCCCcccccC
Q 011477          269 TLIDSLLKLQESEPEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDKHVGLS-RLIEDADLVN  347 (485)
Q Consensus       269 dll~~ll~~~~~~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~~~~~~-~~~~~~~l~~  347 (485)
                      |+++.+++..      .+++++.+++.++++||+|||+++++|++|+|++||++|+||++|++++.+.+ ..++.+++++
T Consensus       279 dll~~ll~~~------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~  352 (502)
T PLN02426        279 DLLSRFMASI------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKE  352 (502)
T ss_pred             hHHHHHHhcC------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhc
Confidence            9999999754      27889999999999999999999999999999999999999999999998753 3689999999


Q ss_pred             CchHHHHHHHHhccccCcccCCCCCCCCcccc-cceeeCCCCEEEeechhhccCCCCC-CCCCCCCCCCccCccc--ccC
Q 011477          348 LPYLHCTINETLRLDQVVRVLPPHESSEECTV-GGYHVPGGTQLLINVWSVHMDPELW-EDPDKFKPERFLMCEE--EQV  423 (485)
Q Consensus       348 l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~-~g~~Ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~Rf~~~~~--~~~  423 (485)
                      ||||+|||+||||++||++... |.+.+|..+ +|+.|||||.|.++++++||||++| +||++|+||||++++.  ...
T Consensus       353 LpYl~avi~EtLRl~p~v~~~~-r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~  431 (502)
T PLN02426        353 MHYLHAALYESMRLFPPVQFDS-KFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPEN  431 (502)
T ss_pred             ChHHHHHHHHHHhCCCCCCCcc-eeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCC
Confidence            9999999999999999999885 899888777 9999999999999999999999999 9999999999997432  234


Q ss_pred             CCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceeeecCC
Q 011477          424 GCKFLPFGSGRRQCPGAGLAMRLMALSLGTLIHCFDWEKAEE  465 (485)
Q Consensus       424 ~~~~~~Fg~G~~~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~  465 (485)
                      +..|+|||+|+|.|+|++||.+|++++++.|+++|++++.++
T Consensus       432 ~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~  473 (502)
T PLN02426        432 PFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGR  473 (502)
T ss_pred             CcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecC
Confidence            568999999999999999999999999999999999998643


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=8.6e-63  Score=467.59  Aligned_cols=409  Identities=16%  Similarity=0.182  Sum_probs=295.4

Q ss_pred             CCCCCCCCCCCCeeecccCC-----CCCchHHHHHHHhhhCC-eEEEEecCccE-------EEecchHHHHHHHHh----
Q 011477           28 PKNLPPSPPSLPIIGHFHLL-----KMPMSQTLTNLCNKYGP-ILLLQVGSRPT-------LVVSSRSAIEECLTK----   90 (485)
Q Consensus        28 ~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------v~i~dp~~i~~i~~~----   90 (485)
                      +.+.|||+.|+|++|+.+++     ..++..++.+.++|||+ ||+++++|.+.       |+++||++++.++.+    
T Consensus        15 ~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~   94 (480)
T PLN02648         15 PLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVD   94 (480)
T ss_pred             CCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcc
Confidence            34568999999999999865     34447999999999999 99999998665       999999999999975    


Q ss_pred             CCcccCCCCCCccccccccccccccccCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCccc
Q 011477           91 NDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSFKDVQKVD  170 (485)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vd  170 (485)
                      ++..+........ ..++.....+++..+|+.|+++|+++. +.|+. .++.+.+.|.+.++++++.|.....++ +++|
T Consensus        95 ~~~~~~~~~~~~~-~l~G~~~~~s~~~~~g~~H~r~Rrll~-~~f~~-~~~~~~~~m~~~~~~~~~~w~~~~~~~-~~vd  170 (480)
T PLN02648         95 KRDVFTGTYMPST-AFTGGYRVLSYLDPSEPKHAKLKSFLF-ELLKS-RHRRFIPEFRAAFAELFDTWEAELAKK-GKAE  170 (480)
T ss_pred             ccccceeeeccCc-cccCCceeeeecCCCCchHHHHHHHHH-HHHHH-hhhhhhhHHHHHHHHHHHHHHHHHhhC-CCcc
Confidence            4333433211111 122211011566778999999999999 89994 778999999999999999996543333 4699


Q ss_pred             HHHHHHHHHHHHHHHHHhcCccCcccccchhHHHHHHHHHHhhhccccCCCcccccc-cccc-----ccccchHHHHHHH
Q 011477          171 VKSLLYKLDFNIVIRMVAGKRCFEEDEMNTDIAKDKLDELNQTFTPLMPTALGDYFP-FLRW-----FTFYGAEQKIRKL  244 (485)
Q Consensus       171 ~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~-----~~~~~~~~~~~~~  244 (485)
                      +.+.++++++|++++++||.+.+..     .....+.......+...........+| ++..     ++...  ....+.
T Consensus       171 v~~~~~~lt~~vi~~~lfG~~~~~~-----~l~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~i~~~~~~~~--~~~~~~  243 (480)
T PLN02648        171 FNDPLDQMAFNFLCKALTGKDPSET-----ALGSDGPALIQKWLALQLAPLASTGLPHVLEELLLHTFPLPF--FLVKSD  243 (480)
T ss_pred             ccchHHHHHHHHHHHHHcCCCcchh-----hhccchhHHHHHHHHHHhhHHHHcCchHHHHHHhhcccCCch--hhhhcc
Confidence            9999999999999999999876331     011111111111111000000000111 0000     00000  000111


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCcHHHHHhcccccCCCCCCHHHHHHHHHH-HHHcCchhHHHHHHHHHHHHhhChH-H
Q 011477          245 RRKRDDFAQALLDEQRKADRKIVPTLIDSLLKLQESEPEFYNDNVIKGIVQA-LLIAGPHTTVTTMELVVSRMITHSE-V  322 (485)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~l~~~~~~-~~~Ag~~tt~~~l~~~l~~L~~~p~-~  322 (485)
                      .+.+.+++.+.               ++.++...++.  .++++|+.++++. +.+++++||+++++|++|+|++||+ +
T Consensus       244 ~~~~~~~~~~~---------------~~~ll~~~~~~--~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v  306 (480)
T PLN02648        244 YDKLYDFFRAS---------------ATEALDLAEKF--GISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEEL  306 (480)
T ss_pred             HHHHHHHHHHH---------------HHHHHHHHHhc--CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHH
Confidence            11222222221               11222222222  2899999999875 4577788888999999999999995 9


Q ss_pred             HHHHHHHHHHhcCC-CCCCCcccccCCchHHHHHHHHhccccCcccCCCCCCCCccccc----ceeeCCCCEEEeechhh
Q 011477          323 FKTARDEIDKHVGL-SRLIEDADLVNLPYLHCTINETLRLDQVVRVLPPHESSEECTVG----GYHVPGGTQLLINVWSV  397 (485)
Q Consensus       323 ~~klr~Ei~~~~~~-~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~----g~~Ip~g~~v~~~~~~~  397 (485)
                      |+||++|++++.+. +..++.+++++|||+++||+|+||++|+++... |.+.+|++++    ||.||||+.|+++.+.+
T Consensus       307 ~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~-r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~  385 (480)
T PLN02648        307 QARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQY-GRAREDFVIESHDAAFEIKKGEMLFGYQPLV  385 (480)
T ss_pred             HHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccccc-ceecCCEEEecCCceEEECCCCEEEEChHHH
Confidence            99999999999863 456899999999999999999999999999886 8899999996    79999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCccCcccccCCCccccc---------CCCCCCCcchHHHHHHHHHHHHHHhhcce-eeecCCC
Q 011477          398 HMDPELWEDPDKFKPERFLMCEEEQVGCKFLPF---------GSGRRQCPGAGLAMRLMALSLGTLIHCFD-WEKAEER  466 (485)
Q Consensus       398 ~~d~~~~~~p~~F~P~Rf~~~~~~~~~~~~~~F---------g~G~~~C~G~~~A~~~~~~~~~~ll~~f~-~~~~~~~  466 (485)
                      ||||++|+||++|||+||++++.. ....+++|         |+|+|.|+|++||++|++++++.|+++|+ |++.++.
T Consensus       386 hrdp~~~~dP~~F~PeRf~~~~~~-~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        386 TRDPKVFDRPEEFVPDRFMGEEGE-KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDT  463 (480)
T ss_pred             hCCcccCCCcceeCCCCCCCCCcc-ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCc
Confidence            999999999999999999875321 12344444         67789999999999999999999999998 9988775


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=4.3e-56  Score=417.38  Aligned_cols=359  Identities=26%  Similarity=0.367  Sum_probs=294.7

Q ss_pred             hHHHHHHHhhhCCeEEEEecCcc--EEEecchHHHHHHHHhCCcccCCCCCCccccc-ccccc-ccccccCCChhHHHHH
Q 011477           52 SQTLTNLCNKYGPILLLQVGSRP--TLVVSSRSAIEECLTKNDIIFANRPLLPSRGQ-EKEKI-FTSIGAPYGEHWRNLR  127 (485)
Q Consensus        52 ~~~~~~~~~kyG~v~~~~~~~~~--~v~i~dp~~i~~i~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~g~~~~~~R  127 (485)
                      ......+.+.||.+++++..+..  ++++++++.+++++.++. .+++......... ..... .++++..+|+.|+++|
T Consensus        25 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~R  103 (411)
T COG2124          25 RFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLR  103 (411)
T ss_pred             hhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHHH
Confidence            55667788889999888876554  799999999999999875 2222211111110 11111 2237788999999999


Q ss_pred             HHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHhcCccCcccccchhHHHHHH
Q 011477          128 RVYALEIFSPRRLLLSANIRTEEIRFMAKHLFQSSFKDVQKVDVKSLLYKLDFNIVIRMVAGKRCFEEDEMNTDIAKDKL  207 (485)
Q Consensus       128 ~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~  207 (485)
                      |+++ +.|+++.++.+.+.+.+.++++++.+ ..   + ..+++.+....+++++++ .+||.+..+.        ..+.
T Consensus       104 kl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~~---~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~--------~~~~  168 (411)
T COG2124         104 KLLA-PAFTPRALRGYRPLIREIADRLLDDL-WQ---G-GADLVLDFAAELTLRVIA-ELLGVPLEDR--------PQLL  168 (411)
T ss_pred             HHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-cc---C-CchhHHHHhhhhhHHHHH-HHhCCCHHHH--------HHHH
Confidence            9999 89999999999999999999999998 22   1 578999999999999999 9999987332        1222


Q ss_pred             HHHHhhhccccCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcHHHHHhcccccCCCCCCH
Q 011477          208 DELNQTFTPLMPTALGDYFPFLRWFTFYGAEQKIRKLRRKRDDFAQALLDEQRKADRKIVPTLIDSLLKLQESEPEFYND  287 (485)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~  287 (485)
                      ..........    .    |...   ......+..++.+.+.+++..++++++.   +...|+++.++.+.+.+++.+|+
T Consensus       169 ~~~~~~~~~~----~----~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~---~~~~dlls~l~~a~~~~~~~lsd  234 (411)
T COG2124         169 RWSDALLLRL----D----PDLG---PEEPWRRARAARRELDAYLRALIAERRA---APRDDLLSLLLSAEDDGGGRLSD  234 (411)
T ss_pred             HHHHHHHhcc----C----cccC---CcccHHHHHHHHHHHHHHHHHHHHHhcc---CCcccHHHHHHHHhhCCCCcCCH
Confidence            2222221110    0    1110   0123456788889999999999999883   46779999999988876667999


Q ss_pred             HHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCCCCcccccCCchHHHHHHHHhccccCccc
Q 011477          288 NVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDKHVGLSRLIEDADLVNLPYLHCTINETLRLDQVVRV  367 (485)
Q Consensus       288 ~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~  367 (485)
                      +|+.++++++++||+|||+++++|++|.|++||+.++++++|.+.                ||+.++|+|+||++||++.
T Consensus       235 ~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~~  298 (411)
T COG2124         235 DEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPL  298 (411)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchhc
Confidence            999999999999999999999999999999999999999998664                7899999999999999999


Q ss_pred             CCCCCCCCcccccceeeCCCCEEEeechhhccCCCCCCCCCCCCCCCccCcccccCCCcccccCCCCCCCcchHHHHHHH
Q 011477          368 LPPHESSEECTVGGYHVPGGTQLLINVWSVHMDPELWEDPDKFKPERFLMCEEEQVGCKFLPFGSGRRQCPGAGLAMRLM  447 (485)
Q Consensus       368 ~~~r~~~~~~~~~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~Rf~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~  447 (485)
                       .+|++.+|++++|+.||||+.|+++++.+||||++|++|++|||+||.        ..|+|||+|+|.|+|.+||.+|+
T Consensus       299 -~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~--------~~~l~FG~G~H~ClG~~lA~~E~  369 (411)
T COG2124         299 -ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN--------NAHLPFGGGPHRCLGAALARLEL  369 (411)
T ss_pred             -cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC--------CCCcCCCCCCccccCHHHHHHHH
Confidence             579999999999999999999999999999999999999999999986        78999999999999999999999


Q ss_pred             HHHHHHHhhcceeeecCC
Q 011477          448 ALSLGTLIHCFDWEKAEE  465 (485)
Q Consensus       448 ~~~~~~ll~~f~~~~~~~  465 (485)
                      +++++.++++|++....+
T Consensus       370 ~~~l~~ll~r~~~~~~~~  387 (411)
T COG2124         370 KVALAELLRRFPLLLLAE  387 (411)
T ss_pred             HHHHHHHHHhCchhhcCC
Confidence            999999999999877665


No 33 
>PHA02681 ORF089 virion membrane protein; Provisional
Probab=64.76  E-value=42  Score=22.95  Aligned_cols=21  Identities=24%  Similarity=0.238  Sum_probs=14.2

Q ss_pred             hHHHHHHHHHHHHHHHHHhhc
Q 011477            4 LHYLGLLVSILLIVYQHIRRN   24 (485)
Q Consensus         4 ~~~~~~l~~~~~~~~~~~~~~   24 (485)
                      +.++++++++++++|..|++.
T Consensus         7 ~~~~V~V~IVclliya~YRR~   27 (92)
T PHA02681          7 LLTVIVISIVCYIVIMMYRRS   27 (92)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc
Confidence            444566667777888877764


No 34 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=63.10  E-value=31  Score=21.11  Aligned_cols=43  Identities=12%  Similarity=0.099  Sum_probs=34.8

Q ss_pred             HHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHH
Q 011477          288 NVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEI  330 (485)
Q Consensus       288 ~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei  330 (485)
                      -++...+..++-.|.|..+-.++--+.+.--||+...++-+|+
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            3566677778888888888888888888888999988888876


No 35 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=60.34  E-value=6.8  Score=25.17  Aligned_cols=9  Identities=44%  Similarity=0.711  Sum_probs=6.7

Q ss_pred             CCCCccCcc
Q 011477          411 KPERFLMCE  419 (485)
Q Consensus       411 ~P~Rf~~~~  419 (485)
                      ||||||.-.
T Consensus        44 DPERWLP~~   52 (59)
T PF08492_consen   44 DPERWLPKR   52 (59)
T ss_pred             CccccCchh
Confidence            888888743


No 36 
>PHA03049 IMV membrane protein; Provisional
Probab=59.58  E-value=26  Score=22.82  Aligned_cols=23  Identities=26%  Similarity=0.262  Sum_probs=14.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcC
Q 011477            3 ALHYLGLLVSILLIVYQHIRRNK   25 (485)
Q Consensus         3 ~~~~~~~l~~~~~~~~~~~~~~~   25 (485)
                      ++.++++++++.+++|-.|.+..
T Consensus         5 ~~l~iICVaIi~lIvYgiYnkk~   27 (68)
T PHA03049          5 IILVIICVVIIGLIVYGIYNKKT   27 (68)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccc
Confidence            44555566667777777776543


No 37 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=58.63  E-value=11  Score=24.02  Aligned_cols=24  Identities=13%  Similarity=0.311  Sum_probs=18.4

Q ss_pred             HHHHHHhhChHHHHHHHHHHHHhc
Q 011477          311 LVVSRMITHSEVFKTARDEIDKHV  334 (485)
Q Consensus       311 ~~l~~L~~~p~~~~klr~Ei~~~~  334 (485)
                      -.+.+|.+||++.++|.+.=.+.+
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asLI   27 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASLI   27 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeEe
Confidence            357799999999999997544443


No 38 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=54.99  E-value=2.8  Score=34.94  Aligned_cols=44  Identities=23%  Similarity=0.276  Sum_probs=32.1

Q ss_pred             CCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEe
Q 011477          347 NLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLI  392 (485)
Q Consensus       347 ~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~  392 (485)
                      .-..+.|||.|+.-+......-  =...+|+.++|..|||||.|.-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~vr--lRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSRVR--LRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCCEEE--EEEcCceEECCEEeCCCCEEEE
Confidence            3456889999998775544332  2337889999999999997654


No 39 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=54.63  E-value=35  Score=22.43  Aligned_cols=24  Identities=25%  Similarity=0.231  Sum_probs=15.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCC
Q 011477            3 ALHYLGLLVSILLIVYQHIRRNKI   26 (485)
Q Consensus         3 ~~~~~~~l~~~~~~~~~~~~~~~~   26 (485)
                      ++.++++++++.+++|..|.+...
T Consensus         5 ~iLi~ICVaii~lIlY~iYnr~~~   28 (68)
T PF05961_consen    5 FILIIICVAIIGLILYGIYNRKKT   28 (68)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccc
Confidence            445555666677777777765443


No 40 
>PRK06789 flagellar motor switch protein; Validated
Probab=50.94  E-value=18  Score=24.59  Aligned_cols=40  Identities=13%  Similarity=0.135  Sum_probs=32.9

Q ss_pred             HHHHHhccccCcccCCCCCCCCccc--ccceeeCCCCEEEee
Q 011477          354 TINETLRLDQVVRVLPPHESSEECT--VGGYHVPGGTQLLIN  393 (485)
Q Consensus       354 ~i~E~lRl~~~~~~~~~r~~~~~~~--~~g~~Ip~g~~v~~~  393 (485)
                      -++|.+.+.+....-+.|.+.+++.  ++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            3789999998887777788877654  489999999999875


No 41 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=44.28  E-value=47  Score=23.14  Aligned_cols=6  Identities=50%  Similarity=0.955  Sum_probs=3.6

Q ss_pred             CCCeee
Q 011477           37 SLPIIG   42 (485)
Q Consensus        37 ~~p~~G   42 (485)
                      +-|++|
T Consensus        66 YrPvI~   71 (94)
T PF05393_consen   66 YRPVIG   71 (94)
T ss_pred             cccccc
Confidence            456666


No 42 
>PHA02902 putative IMV membrane protein; Provisional
Probab=44.26  E-value=62  Score=20.97  Aligned_cols=22  Identities=18%  Similarity=0.390  Sum_probs=14.1

Q ss_pred             hHHHHHHHHHHHHHHHHHhhcC
Q 011477            4 LHYLGLLVSILLIVYQHIRRNK   25 (485)
Q Consensus         4 ~~~~~~l~~~~~~~~~~~~~~~   25 (485)
                      ..++.+++++++++|..|++.+
T Consensus         7 vi~~v~v~Ivclliya~YrR~k   28 (70)
T PHA02902          7 VILAVIVIIFCLLIYAAYKRYK   28 (70)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc
Confidence            3445556667777777777653


No 43 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=43.45  E-value=1.3e+02  Score=22.07  Aligned_cols=59  Identities=20%  Similarity=0.374  Sum_probs=39.4

Q ss_pred             CCCCCCCCCCeeecccCCCCCchHHHHHHHhhhCCeEEEEecC------ccEEEecchHHHHHHHHh
Q 011477           30 NLPPSPPSLPIIGHFHLLKMPMSQTLTNLCNKYGPILLLQVGS------RPTLVVSSRSAIEECLTK   90 (485)
Q Consensus        30 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~------~~~v~i~dp~~i~~i~~~   90 (485)
                      +.||.-..+-++.|+..- -. .+-+-++.-+||+|.++++|.      .-+||-.|-..++....+
T Consensus        12 rlppevnriLyirNLp~~-IT-seemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   12 RLPPEVNRILYIRNLPFK-IT-SEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             CCChhhheeEEEecCCcc-cc-HHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            445554555555554422 22 455667889999999999984      567888888877776654


No 44 
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=43.09  E-value=55  Score=17.65  Aligned_cols=20  Identities=20%  Similarity=0.469  Sum_probs=11.7

Q ss_pred             ChhhHHHHHHHHHHHHHHHH
Q 011477            1 MDALHYLGLLVSILLIVYQH   20 (485)
Q Consensus         1 m~~~~~~~~l~~~~~~~~~~   20 (485)
                      |.++++..+++.++-+++..
T Consensus         1 MEal~Ytfll~~tlgiiFFA   20 (31)
T PRK11875          1 MESFAYILILTLALVTLFFA   20 (31)
T ss_pred             ChhHHHHHHHHHHHHHHHHh
Confidence            67777766665554444433


No 45 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=42.90  E-value=22  Score=19.39  Aligned_cols=16  Identities=25%  Similarity=0.603  Sum_probs=13.6

Q ss_pred             CCCcccccCCCCCCCc
Q 011477          423 VGCKFLPFGSGRRQCP  438 (485)
Q Consensus       423 ~~~~~~~Fg~G~~~C~  438 (485)
                      .+..|+|+++..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            4688999999999994


No 46 
>CHL00031 psbT photosystem II protein T
Probab=41.80  E-value=58  Score=17.90  Aligned_cols=20  Identities=50%  Similarity=0.569  Sum_probs=11.7

Q ss_pred             ChhhHHHHHHHHHHHHHHHH
Q 011477            1 MDALHYLGLLVSILLIVYQH   20 (485)
Q Consensus         1 m~~~~~~~~l~~~~~~~~~~   20 (485)
                      |.++++..+++.++-+++..
T Consensus         1 MEalvYtfll~~tlgilFFA   20 (33)
T CHL00031          1 MEALVYTFLLVSTLGIIFFA   20 (33)
T ss_pred             CchhHHHHHHHHHHHHHHHh
Confidence            67777766665554444433


No 47 
>PRK14740 kdbF potassium-transporting ATPase subunit F; Provisional
Probab=41.01  E-value=45  Score=17.64  Aligned_cols=12  Identities=0%  Similarity=0.011  Sum_probs=5.1

Q ss_pred             HHHHHHHHHHHH
Q 011477           10 LVSILLIVYQHI   21 (485)
Q Consensus        10 l~~~~~~~~~~~   21 (485)
                      +.+++++++.+.
T Consensus        13 ~~Lf~YLv~ALl   24 (29)
T PRK14740         13 TGLFVYLLVALL   24 (29)
T ss_pred             HHHHHHHHHHHh
Confidence            333444444443


No 48 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=39.41  E-value=25  Score=26.96  Aligned_cols=22  Identities=18%  Similarity=0.353  Sum_probs=16.6

Q ss_pred             CCcchHHHHHHHHHHHHHHhhc
Q 011477          436 QCPGAGLAMRLMALSLGTLIHC  457 (485)
Q Consensus       436 ~C~G~~~A~~~~~~~~~~ll~~  457 (485)
                      +|.|+.||+.++-.++..|+..
T Consensus        19 N~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   19 NCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             ETTS----HHHHHHHHHHHHHS
T ss_pred             cccchHHHHHHHHHHHHHHhcC
Confidence            8999999999999999999865


No 49 
>PF01405 PsbT:  Photosystem II reaction centre T protein;  InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection [].   This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=39.33  E-value=63  Score=17.23  Aligned_cols=21  Identities=43%  Similarity=0.551  Sum_probs=11.6

Q ss_pred             ChhhHHHHHHHHHHHHHHHHH
Q 011477            1 MDALHYLGLLVSILLIVYQHI   21 (485)
Q Consensus         1 m~~~~~~~~l~~~~~~~~~~~   21 (485)
                      |..+++..+++.++-+++...
T Consensus         1 MEa~vY~~ll~~tlgilffAI   21 (29)
T PF01405_consen    1 MEALVYTFLLIGTLGILFFAI   21 (29)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHhhh
Confidence            666776666666544444443


No 50 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=38.35  E-value=1.3e+02  Score=21.24  Aligned_cols=49  Identities=4%  Similarity=-0.006  Sum_probs=40.7

Q ss_pred             CHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhc
Q 011477          286 NDNVIKGIVQALLIAGPHTTVTTMELVVSRMITHSEVFKTARDEIDKHV  334 (485)
Q Consensus       286 ~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~klr~Ei~~~~  334 (485)
                      +.+.........++.=+..++....-.+.+.++||+..+++.+.+.+-+
T Consensus        30 ~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   30 SSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            4555566666788888999999999999999999999999998887654


No 51 
>PF15206 FAM209:  FAM209 family
Probab=38.08  E-value=23  Score=27.09  Aligned_cols=30  Identities=10%  Similarity=0.226  Sum_probs=17.1

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCCCCCCCee
Q 011477           12 SILLIVYQHIRRNKIQPKNLPPSPPSLPII   41 (485)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~   41 (485)
                      +++++++.+......+..+.|||..++|+-
T Consensus        48 v~lyvilKf~g~~~K~keq~p~glrg~~fr   77 (150)
T PF15206_consen   48 VVLYVILKFRGDSEKNKEQSPPGLRGCSFR   77 (150)
T ss_pred             HHHHheeEeccCcccccccCCCccCcccCC
Confidence            344444444443334555678888888763


No 52 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=37.67  E-value=15  Score=22.86  Aligned_cols=11  Identities=45%  Similarity=0.996  Sum_probs=9.2

Q ss_pred             cccCCCCCCCc
Q 011477          428 LPFGSGRRQCP  438 (485)
Q Consensus       428 ~~Fg~G~~~C~  438 (485)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            37999999885


No 53 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=37.42  E-value=24  Score=24.70  Aligned_cols=19  Identities=11%  Similarity=0.427  Sum_probs=17.0

Q ss_pred             HHHHHHHHHhhcceeeecC
Q 011477          446 LMALSLGTLIHCFDWEKAE  464 (485)
Q Consensus       446 ~~~~~~~~ll~~f~~~~~~  464 (485)
                      -|+-.+..+|+-|||.+++
T Consensus        61 ~IrdAVsqVLkGYDWtLVP   79 (84)
T PF12444_consen   61 CIRDAVSQVLKGYDWTLVP   79 (84)
T ss_pred             HHHHHHHHHhccCCceeee
Confidence            5789999999999999874


No 54 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=34.08  E-value=27  Score=27.01  Aligned_cols=19  Identities=21%  Similarity=0.434  Sum_probs=8.5

Q ss_pred             HHHHHHHHHHhhcCCCCCC
Q 011477           12 SILLIVYQHIRRNKIQPKN   30 (485)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~   30 (485)
                      +++++++....+.+++.++
T Consensus        11 ~i~l~~~~~~~~~rRR~r~   29 (130)
T PF12273_consen   11 AILLFLFLFYCHNRRRRRR   29 (130)
T ss_pred             HHHHHHHHHHHHHHHHhhc
Confidence            3333444444555554443


No 55 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=33.98  E-value=1.2e+02  Score=18.83  Aligned_cols=35  Identities=11%  Similarity=0.263  Sum_probs=24.6

Q ss_pred             HHHHhhhCCeEEEEecCc----cEEEecchHHHHHHHHh
Q 011477           56 TNLCNKYGPILLLQVGSR----PTLVVSSRSAIEECLTK   90 (485)
Q Consensus        56 ~~~~~kyG~v~~~~~~~~----~~v~i~dp~~i~~i~~~   90 (485)
                      .+...+||+|-.+.+...    -+|-..+++.++.....
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~   40 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ   40 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence            467889999988887543    34556788888887763


No 56 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=33.70  E-value=8.2  Score=36.17  Aligned_cols=44  Identities=20%  Similarity=0.168  Sum_probs=32.0

Q ss_pred             CCchHHHHHHHHhccccCcccCCCCCCCCcccccceeeCCCCEEEe
Q 011477          347 NLPYLHCTINETLRLDQVVRVLPPHESSEECTVGGYHVPGGTQLLI  392 (485)
Q Consensus       347 ~l~~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~Ip~g~~v~~  392 (485)
                      .-..+.|||.|+.-+......-  =...+|+.++|..||+||.|.-
T Consensus       254 ~~n~I~A~V~~~qtv~~G~~vr--lRLle~~~v~~~~ipkgt~l~g  297 (410)
T TIGR03779       254 ERNTIRACVHETQTVVDGSAVK--LRLLEPIQAGDLVIPKGTVLYG  297 (410)
T ss_pred             CCCceEEEEcCceEEecCCEEE--EEEcCceeeCCEEecCCCEEEE
Confidence            3566889999998876543332  2337899999999999996643


No 57 
>PF04798 Baculo_19:  Baculovirus 19 kDa protein conserved region;  InterPro: IPR006883 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf96; it is a family of uncharacterised viral proteins.
Probab=32.90  E-value=10  Score=29.44  Aligned_cols=23  Identities=26%  Similarity=0.369  Sum_probs=17.3

Q ss_pred             cCCCcccccCCCCCCCcchHHHHH
Q 011477          422 QVGCKFLPFGSGRRQCPGAGLAMR  445 (485)
Q Consensus       422 ~~~~~~~~Fg~G~~~C~G~~~A~~  445 (485)
                      +.-+.|+- |.+.|.||+.++|..
T Consensus        55 G~lYyYle-gss~~~CP~nE~avV   77 (146)
T PF04798_consen   55 GTLYYYLE-GSSSVFCPPNEFAVV   77 (146)
T ss_pred             CeEEEEEe-ccccccCCCCceEEE
Confidence            34466777 899999998887743


No 58 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=30.31  E-value=85  Score=22.09  Aligned_cols=18  Identities=17%  Similarity=0.272  Sum_probs=15.5

Q ss_pred             ChHHHHHHHHHHHHhcCC
Q 011477          319 HSEVFKTARDEIDKHVGL  336 (485)
Q Consensus       319 ~p~~~~klr~Ei~~~~~~  336 (485)
                      .|++.+.+|+||.+++..
T Consensus        35 ~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          35 QPDYLEQLRKEILEVISK   52 (88)
T ss_pred             CcchHHHHHHHHHHHHHH
Confidence            489999999999998753


No 59 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=29.07  E-value=1.2e+02  Score=23.28  Aligned_cols=39  Identities=18%  Similarity=0.338  Sum_probs=29.7

Q ss_pred             hHHHHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHhCC
Q 011477           52 SQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKND   92 (485)
Q Consensus        52 ~~~~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~~~   92 (485)
                      ...+.+|.++||.+--  ..+...+...|++.++++...+.
T Consensus        77 ~~~i~~w~~~~g~v~l--~~~~~~l~~~d~~~l~~l~~~~~  115 (129)
T PF13625_consen   77 EQSIEDWARRYGRVRL--YKGAYLLECDDPELLDELLADPE  115 (129)
T ss_pred             HHHHHHHHHhcCCEEE--ecCeEEEEECCHHHHHHHHhChh
Confidence            6789999999998753  22355677889999999887653


No 60 
>PRK05933 type III secretion system protein; Validated
Probab=27.63  E-value=61  Score=29.23  Aligned_cols=43  Identities=14%  Similarity=0.141  Sum_probs=34.5

Q ss_pred             HHHHHHHHhccccCcccCCCCCC-CC--cccccceeeCCCCEEEee
Q 011477          351 LHCTINETLRLDQVVRVLPPHES-SE--ECTVGGYHVPGGTQLLIN  393 (485)
Q Consensus       351 l~a~i~E~lRl~~~~~~~~~r~~-~~--~~~~~g~~Ip~g~~v~~~  393 (485)
                      ...-|+|.++|.+....-+.|.+ .+  |+.++|..|.+|..|.+.
T Consensus       317 T~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        317 YSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             ccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            55669999999998877776664 44  556699999999999885


No 61 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=27.39  E-value=2.4e+02  Score=27.33  Aligned_cols=24  Identities=21%  Similarity=0.275  Sum_probs=12.5

Q ss_pred             hHHHHHHH-hhhCCeEEEEecCccE
Q 011477           52 SQTLTNLC-NKYGPILLLQVGSRPT   75 (485)
Q Consensus        52 ~~~~~~~~-~kyG~v~~~~~~~~~~   75 (485)
                      .+.++-.. -+||.|+.=.+-++.+
T Consensus       212 l~l~eli~~Grfg~V~KaqL~~~~V  236 (534)
T KOG3653|consen  212 LQLLELIGRGRFGCVWKAQLDNRLV  236 (534)
T ss_pred             hhhHHHhhcCccceeehhhccCcee
Confidence            44443333 3577777655555443


No 62 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=26.88  E-value=1.1e+02  Score=17.64  Aligned_cols=16  Identities=19%  Similarity=0.410  Sum_probs=11.0

Q ss_pred             HHHHh-hChHHHHHHHH
Q 011477          313 VSRMI-THSEVFKTARD  328 (485)
Q Consensus       313 l~~L~-~~p~~~~klr~  328 (485)
                      +-.++ +|||+++.++.
T Consensus        19 L~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   19 LQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHhChhHHHHHHh
Confidence            33344 79999888774


No 63 
>PRK09919 anti-adapter protein IraM; Provisional
Probab=25.00  E-value=25  Score=26.07  Aligned_cols=38  Identities=11%  Similarity=0.199  Sum_probs=31.3

Q ss_pred             cceeeCCCCEEEeechhhccCCCCCC----CCCCCCCCCccC
Q 011477          380 GGYHVPGGTQLLINVWSVHMDPELWE----DPDKFKPERFLM  417 (485)
Q Consensus       380 ~g~~Ip~g~~v~~~~~~~~~d~~~~~----~p~~F~P~Rf~~  417 (485)
                      +++.+|.|+.+...-..+--|.+.++    +-..|++..|..
T Consensus        35 ~d~~L~pG~~i~~~~~gvliNdk~~pItIYnvtpyn~~lW~~   76 (114)
T PRK09919         35 ADIFLPPGSIITPVKSGVLLNDKPYPITIYNITPFNKALWSL   76 (114)
T ss_pred             eeEEeCCCCEEEEcCCeEEECCcEeEEEEEEecccCHHHHHH
Confidence            57899999999988877777777665    778999999953


No 64 
>PHA03162 hypothetical protein; Provisional
Probab=24.61  E-value=56  Score=24.85  Aligned_cols=24  Identities=29%  Similarity=0.577  Sum_probs=19.3

Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHH
Q 011477          431 GSGRRQCPGAGLAMRLMALSLGTL  454 (485)
Q Consensus       431 g~G~~~C~G~~~A~~~~~~~~~~l  454 (485)
                      ++|.+.|||++..+-|+-.=|++|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            469999999998888877666655


No 65 
>PF05524 PEP-utilisers_N:  PEP-utilising enzyme, N-terminal;  InterPro: IPR008731  This sequence identifies proteins which are a component of the phosphoenolpyruvate:sugar phosphotransferase system (PTS), a major carbohydrate active transport system. The PTS system is found throughout the bacterial kingdom, and is responsible for the coupled phosphorylation and translocation of numerous sugars across the cytoplasmic membrane []. This entry represents the N-terminal domain of enzyme I (EIN) which transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) which in turn phosphorylates a group of membrane-associated proteins, known as enzyme II. The N-terminal domain of EI (EIN) extends from residues 1 to 259 and can be phosphorylated in a fully reversible manner by phosphorylated HPr. EIN, however, cannot be autophosphorylated by PEP [, ].; GO: 0005351 sugar:hydrogen symporter activity, 0008965 phosphoenolpyruvate-protein phosphotransferase activity, 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0005737 cytoplasm; PDB: 2WQD_A 2XDF_B 2HWG_A 3EZB_A 2L5H_A 3EZA_A 1EZB_A 2EZA_A 1EZA_A 1EZC_A ....
Probab=24.26  E-value=3.2e+02  Score=20.66  Aligned_cols=69  Identities=12%  Similarity=0.180  Sum_probs=36.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCCcHHHHHhcccccCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHH
Q 011477          240 KIRKLRRKRDDFAQALLDEQRKADRKIVPTLIDSLLKLQESEPEFYNDNVIKGIVQALLIAGPHTTVTTMELVVSRM  316 (485)
Q Consensus       240 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~l~~~~~~~~~Ag~~tt~~~l~~~l~~L  316 (485)
                      ++.++.+....-+.+..+...........++++.-+..       +++.++...+...+-.|. +...++.-++-.+
T Consensus        39 rl~~Al~~~~~eL~~l~~~~~~~~~~~~a~If~ah~~~-------L~D~~l~~~v~~~I~~~~-~Ae~Av~~~~~~~  107 (123)
T PF05524_consen   39 RLEQALEKAREELEQLAERAESKLGEEEAAIFEAHLMM-------LEDPELIDEVEELIREGK-NAEYAVQEVIEEY  107 (123)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCHSSCTHHHHHHHHH-------HT-HHHHHHHHHHHHHH---HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH-------hcCHhHHHHHHHHHhccC-CHHHHHHHHHHHH
Confidence            33344333333333333332222223344777666654       578889999998888887 6666655444433


No 66 
>cd08318 Death_NMPP84 Death domain of Nuclear Matrix Protein P84. Death domain (DD) found in the Nuclear Matrix Protein P84 (also known as HPR1 or THOC1). HPR1/p84 resides in the nuclear matrix and is part of the THO complex, also called TREX (transcription/export) complex, which functions in mRNP biogenesis at the interface between transcription and export of mRNA from the nucleus. Mice lacking THOC1 have abnormal testis development and are sterile. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Probab=24.04  E-value=2.6e+02  Score=19.63  Aligned_cols=42  Identities=10%  Similarity=0.125  Sum_probs=28.0

Q ss_pred             CChhHHHHHHHHHHhhcchhhhhhhh---hhHHHHHHHHHHHHHhhcc
Q 011477          119 YGEHWRNLRRVYALEIFSPRRLLLSA---NIRTEEIRFMAKHLFQSSF  163 (485)
Q Consensus       119 ~g~~~~~~R~~~~~~~f~~~~l~~~~---~~~~~~~~~~~~~l~~~~~  163 (485)
                      -|..|+.+-+.+.   |+...+..+.   +-..+.+..++..|....+
T Consensus        17 iG~~Wk~Lar~LG---ls~~dI~~i~~~~~~~~eq~~~mL~~W~~r~g   61 (86)
T cd08318          17 LGEDWKTLAPHLE---MKDKEIRAIESDSEDIKMQAKQLLVAWQDREG   61 (86)
T ss_pred             HhhhHHHHHHHcC---CCHHHHHHHHhcCCCHHHHHHHHHHHHHHhcC
Confidence            4789998876653   6665554332   3356778888888877654


No 67 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=23.96  E-value=45  Score=22.00  Aligned_cols=14  Identities=21%  Similarity=0.430  Sum_probs=12.0

Q ss_pred             CchHHHHHHHHhcc
Q 011477          348 LPYLHCTINETLRL  361 (485)
Q Consensus       348 l~~l~a~i~E~lRl  361 (485)
                      .-+++.+|+|++|+
T Consensus        40 ~~fv~~~IkEA~RF   53 (65)
T PF15300_consen   40 KQFVEMIIKEAARF   53 (65)
T ss_pred             HHHHHHHHHHHHHH
Confidence            45689999999997


No 68 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=22.78  E-value=48  Score=27.92  Aligned_cols=19  Identities=37%  Similarity=0.821  Sum_probs=17.0

Q ss_pred             hhccCCCCCCCCCCCCCCC
Q 011477          396 SVHMDPELWEDPDKFKPER  414 (485)
Q Consensus       396 ~~~~d~~~~~~p~~F~P~R  414 (485)
                      .-|-|+.+|.|...|.|-|
T Consensus       193 ~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  193 PDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCcccccCccccCCCC
Confidence            3488999999999999988


No 69 
>PRK14750 kdpF potassium-transporting ATPase subunit F; Provisional
Probab=22.65  E-value=1.4e+02  Score=15.87  Aligned_cols=9  Identities=22%  Similarity=0.305  Sum_probs=3.7

Q ss_pred             HHHHHHHHH
Q 011477           12 SILLIVYQH   20 (485)
Q Consensus        12 ~~~~~~~~~   20 (485)
                      ++.+++|.+
T Consensus        15 Ll~YLvYAL   23 (29)
T PRK14750         15 LLGYLVYAL   23 (29)
T ss_pred             HHHHHHHHH
Confidence            334444433


No 70 
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.72  E-value=2.7e+02  Score=19.65  Aligned_cols=36  Identities=14%  Similarity=0.237  Sum_probs=27.3

Q ss_pred             HHHHHhhhCCeEEEEecCccEEEecchHHHHHHHHh
Q 011477           55 LTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTK   90 (485)
Q Consensus        55 ~~~~~~kyG~v~~~~~~~~~~v~i~dp~~i~~i~~~   90 (485)
                      ..+..++||+|.-..--.+-.++-++-+.+++++.+
T Consensus        18 ~aRqLrkfG~v~Y~Skk~kY~vlYvn~~~ve~~~~k   53 (90)
T COG4471          18 DARQLRKFGDVHYVSKKSKYVVLYVNEQDVEQIVEK   53 (90)
T ss_pred             hhHHHHhcCCEEEEecceeEEEEEECHHHHHHHHHH
Confidence            345668999998665555666778899999998865


No 71 
>cd00652 TBP_TLF TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA. New members of the TBP family, called TBP-like proteins (TBLP, TLF, TLP) or TBP-related factors (TRF1, TRF2,TRP), are similar to the core domain of TBPs, with identical or chemically similar amino acids at many
Probab=20.64  E-value=1.2e+02  Score=25.01  Aligned_cols=54  Identities=19%  Similarity=0.249  Sum_probs=34.3

Q ss_pred             CCCCCCCccCc--ccccCCCcccccCCCCCCCcch---HHHHHHHHHHHHHHhhcceeee
Q 011477          408 DKFKPERFLMC--EEEQVGCKFLPFGSGRRQCPGA---GLAMRLMALSLGTLIHCFDWEK  462 (485)
Q Consensus       408 ~~F~P~Rf~~~--~~~~~~~~~~~Fg~G~~~C~G~---~~A~~~~~~~~~~ll~~f~~~~  462 (485)
                      -+|+||||-.-  +-..+....+-|+.|+=.|-|.   .=|..-++ -++.+|+++.+..
T Consensus        29 ~~YePe~fpgli~R~~~P~~t~lIf~sGKivitGaks~~~~~~a~~-~~~~~L~~~g~~~   87 (174)
T cd00652          29 AEYNPKRFPGVIMRLREPKTTALIFSSGKMVITGAKSEEDAKLAAR-KYARILQKLGFPV   87 (174)
T ss_pred             cEECCCccceEEEEcCCCcEEEEEECCCEEEEEecCCHHHHHHHHH-HHHHHHHHcCCCc
Confidence            58999998542  1123567788999999999993   22222232 3445566666555


No 72 
>COG1886 FliN Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=20.62  E-value=1e+02  Score=24.02  Aligned_cols=41  Identities=15%  Similarity=0.229  Sum_probs=33.2

Q ss_pred             HHHHHHhccccCcccCCCCCCCCcccc--cceeeCCCCEEEee
Q 011477          353 CTINETLRLDQVVRVLPPHESSEECTV--GGYHVPGGTQLLIN  393 (485)
Q Consensus       353 a~i~E~lRl~~~~~~~~~r~~~~~~~~--~g~~Ip~g~~v~~~  393 (485)
                      .-++|-+++......-+.+.+.+++.+  +|+.|-+|..|.+.
T Consensus        84 ~~l~ell~l~~Gsvi~Ld~~~~~~VdI~vNg~~Ig~GEvVvvd  126 (136)
T COG1886          84 MPLGELLALGKGSVIELDKLAGEPVDILVNGRLIGRGEVVVVD  126 (136)
T ss_pred             eeHHHHHhcCCCCEEEcCCcCCCceEEEECCEEEEEEeEEEEC
Confidence            447899999888777777888776555  99999999999874


No 73 
>PRK13467 F0F1 ATP synthase subunit C; Provisional
Probab=20.28  E-value=1.6e+02  Score=19.60  Aligned_cols=24  Identities=13%  Similarity=0.037  Sum_probs=19.3

Q ss_pred             HHHHHHHHHHHhhChHHHHHHHHH
Q 011477          306 VTTMELVVSRMITHSEVFKTARDE  329 (485)
Q Consensus       306 ~~~l~~~l~~L~~~p~~~~klr~E  329 (485)
                      +...+..+--+++|||.+.+++.-
T Consensus        20 G~v~~~a~e~iaRqPE~~~~i~~~   43 (66)
T PRK13467         20 GFLMANLFKSAARQPEMIGQLRSL   43 (66)
T ss_pred             HHHHHHHHHHHHcChhHHHhHHHH
Confidence            455667778899999999999864


Done!