Query 011482
Match_columns 484
No_of_seqs 324 out of 1696
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 09:03:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011482.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011482hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 4.2E-60 1.4E-64 489.0 28.7 341 117-479 6-398 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 3.9E-56 1.3E-60 459.1 29.5 339 119-483 9-396 (403)
3 3psg_A Pepsinogen; hydrolase(a 100.0 8.5E-56 2.9E-60 451.0 31.5 307 119-480 45-370 (370)
4 1tzs_A Cathepsin E; hydrolase, 100.0 1.5E-55 5.3E-60 446.6 31.3 312 120-483 13-345 (351)
5 3c9x_A Trichoderma reesei aspa 100.0 1.2E-55 4.2E-60 443.5 25.9 300 131-479 13-329 (329)
6 2apr_A Rhizopuspepsin; hydrola 100.0 4.8E-55 1.6E-59 438.4 27.7 296 131-480 13-324 (325)
7 1oew_A Endothiapepsin; hydrola 100.0 1.9E-55 6.6E-60 442.0 24.4 299 131-479 13-329 (329)
8 2x0b_A Renin; hydrolase-hormon 100.0 2.2E-55 7.6E-60 449.1 24.6 307 120-480 51-383 (383)
9 1dpj_A Proteinase A; proteinas 100.0 1.1E-54 3.8E-59 436.6 28.2 307 120-480 3-329 (329)
10 1ibq_A Aspergillopepsin; aspar 100.0 1.1E-54 3.6E-59 435.9 27.2 299 131-480 12-325 (325)
11 2qzx_A Candidapepsin-5; aspart 100.0 1.2E-54 4E-59 438.7 26.2 305 120-483 3-334 (342)
12 1t6e_X Xylanase inhibitor; two 100.0 3.9E-54 1.3E-58 441.0 29.6 328 121-480 4-373 (381)
13 1j71_A Candidapepsin, aspartic 100.0 2.3E-54 8E-59 435.1 26.6 300 120-483 3-327 (334)
14 1miq_A Plasmepsin; aspartic pr 100.0 2.5E-54 8.4E-59 441.0 27.1 304 120-480 52-374 (375)
15 3cms_A Chymosin B; hydrolase, 100.0 1.2E-54 4.1E-59 435.2 23.9 302 120-480 4-323 (323)
16 1am5_A Pepsin, acid proteinase 100.0 2E-54 6.9E-59 433.8 25.3 301 121-480 3-324 (324)
17 1mpp_A Pepsin; hydrolase(acid 100.0 1.9E-54 6.4E-59 440.4 25.5 314 119-483 7-358 (361)
18 1yg9_A Aspartic protease BLA G 100.0 1.7E-54 5.7E-59 435.3 23.6 305 120-480 7-329 (330)
19 1izd_A Aspartic proteinase; su 100.0 2.8E-54 9.5E-59 432.4 24.2 295 132-480 14-323 (323)
20 1htr_B Gastricsin; aspartyl pr 100.0 4.8E-54 1.6E-58 431.9 25.6 304 120-480 3-329 (329)
21 3fv3_A SAPP1P-secreted asparti 100.0 7.7E-54 2.6E-58 432.2 27.1 302 120-483 3-332 (339)
22 4aa9_A Chymosin; hydrolase, as 100.0 3.7E-54 1.3E-58 431.1 23.5 302 122-480 3-320 (320)
23 1qdm_A Prophytepsin; aspartic 100.0 3.6E-53 1.2E-57 444.2 31.9 315 120-480 42-478 (478)
24 1bxo_A Protein (penicillopepsi 100.0 4E-54 1.4E-58 431.4 22.1 295 132-480 14-323 (323)
25 3k1w_A Renin; protease, altern 100.0 1.1E-53 3.7E-58 431.5 24.2 309 119-480 7-340 (341)
26 2bju_A Plasmepsin II; aspartic 100.0 6.1E-54 2.1E-58 445.8 22.6 304 120-480 128-450 (453)
27 3pvk_A Candidapepsin-2; hydrol 100.0 2.2E-53 7.4E-58 429.4 25.0 304 120-483 3-334 (342)
28 3qvc_A Histo-aspartic protease 100.0 1.1E-52 3.8E-57 436.8 26.1 304 118-480 125-449 (451)
29 2ewy_A Beta-secretase 2; BACE2 100.0 9.7E-52 3.3E-56 423.7 26.9 306 134-482 14-357 (383)
30 2qp8_A Beta-secretase 1; BACE1 100.0 2.9E-51 9.9E-56 421.8 26.6 310 133-483 21-370 (395)
31 1wkr_A Polyporopepsin; hydrola 100.0 1.1E-50 3.9E-55 409.2 27.4 303 120-483 3-336 (340)
32 3lpj_A Beta-secretase 1; alzhe 100.0 7.9E-51 2.7E-55 425.8 26.0 312 133-483 74-423 (455)
33 3vf3_A Beta-secretase 1; struc 100.0 2.4E-50 8.1E-55 416.0 27.3 312 133-483 28-377 (402)
34 1b5f_A Protein (cardosin A); h 100.0 1.3E-39 4.5E-44 312.0 17.6 222 120-380 3-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 1.1E-36 3.8E-41 292.1 21.2 224 238-480 1-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.8 4.4E-20 1.5E-24 150.5 8.0 87 121-239 4-96 (97)
37 1b5f_B Protein (cardosin A); h 99.7 1.8E-17 6.3E-22 132.5 8.5 84 390-480 1-87 (87)
38 2i1a_A DNA damage-inducible pr 89.9 0.77 2.6E-05 39.0 7.1 107 330-477 26-134 (148)
39 3s8i_A Protein DDI1 homolog 1; 89.6 0.42 1.4E-05 41.0 5.2 109 330-479 24-135 (148)
40 1fmb_A EIAV protease; hydrolas 86.5 0.72 2.5E-05 36.9 4.4 26 135-160 9-34 (104)
41 2hs1_A HIV-1 protease; ultra-h 85.8 0.82 2.8E-05 36.2 4.3 27 136-162 10-36 (99)
42 3ec0_A Protease; HIV-2, inhibi 82.2 1.4 4.7E-05 34.9 4.2 27 136-162 10-36 (99)
43 2i1a_A DNA damage-inducible pr 80.9 1.4 4.7E-05 37.4 4.1 29 133-161 25-53 (148)
44 2hah_A Protease, retropepsin; 78.7 2 6.8E-05 35.0 4.1 26 136-162 16-41 (116)
45 3sqf_A Protease; folded monome 74.7 3.3 0.00011 33.5 4.4 28 136-163 11-38 (114)
46 3s8i_A Protein DDI1 homolog 1; 71.9 3.3 0.00011 35.2 4.0 29 134-162 24-52 (148)
47 3slz_A GAG-Pro-POL polyprotein 61.0 8.2 0.00028 32.1 4.1 28 135-162 23-50 (132)
48 3ka2_A [L-Ala51;Gly51']HIV-1 p 58.1 9.1 0.00031 34.3 4.2 27 135-161 9-35 (203)
49 2rsp_A RSV protease; hydrolase 57.7 8 0.00027 31.8 3.4 23 141-163 27-49 (124)
50 3liy_A Protease; hydrolase, hy 57.6 11 0.00039 30.3 4.2 29 136-164 12-45 (116)
51 3ka2_A [L-Ala51;Gly51']HIV-1 p 37.2 31 0.0011 30.8 4.2 26 136-161 114-139 (203)
52 1b5f_A Protein (cardosin A); h 21.3 67 0.0023 29.0 3.7 29 134-162 189-227 (239)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=4.2e-60 Score=488.96 Aligned_cols=341 Identities=25% Similarity=0.471 Sum_probs=274.6
Q ss_pred CCccccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCcccc
Q 011482 117 VSNTEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCH 194 (484)
Q Consensus 117 ~~~~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~ 194 (484)
++...+|+.... .+++|+++|.||| |+|.|+|||||+++||+|.+| .+|+||+.++|.++.|.
T Consensus 6 ~~~~~~pv~~d~--~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C~ 70 (413)
T 3vla_A 6 PSALVVPVKKDA--STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQCS 70 (413)
T ss_dssp CSEEEEEEEECT--TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHHH
T ss_pred CccEEEEeeecC--CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCccccc
Confidence 345778888764 5679999999999 999999999999999999976 37999999999999998
Q ss_pred cccccCC------CCCCCCCCCCCCCeeeEEc-CCCceEeEEEEEEEEEecc---------ccccceEEEEEecc--CCC
Q 011482 195 ALEFATG------NSGVCSSSSPPDCNYFVSY-GDGSYTRGELGREHLGLGK---------ASVNDFIFGCGRNN--KGL 256 (484)
Q Consensus 195 ~~~~~~~------~~~~C~~~~~~~C~~~~~Y-gdgs~~~G~~~~Dtltlg~---------~~~~~~~fG~~~~~--~~~ 256 (484)
....... ....|. ++.|.|.+.| +||+.+.|++++|+|+|++ ..++++.|||++.. .+.
T Consensus 71 ~~~~~~~~~c~s~~~~~c~---~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~ 147 (413)
T 3vla_A 71 LSGSIACGDCFNGPRPGCN---NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNL 147 (413)
T ss_dssp HTTCCEEECCSSCCBTTBC---SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTS
T ss_pred ccccCCCcccccCCCCCCC---CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCc
Confidence 7643210 011233 2469999999 5888889999999999962 57889999999986 456
Q ss_pred CCCcCeeeecCCCCCccccchhhcc--CCeeEEeeCCCCCCCCcceEEecCCCccc----cCCCC-eEEeeCcCCCCC--
Q 011482 257 FGGVSGLMGLGRSDLSLVSQTSEIF--GGLFSYCLPSTQDAGASGSLILGGNSSVF----KNSTP-ITYTNMIPNPQL-- 327 (484)
Q Consensus 257 ~~~~~GIlGLg~~~~Sl~~ql~~~~--~~~FS~~L~~~~~~~~~G~L~fGg~~~~~----~~~~~-~~~~pl~~~~~~-- 327 (484)
+..++||||||++++|+++|+.... .++|||||++. ....|.|+||+.+..+ +..++ ++|+|++.++..
T Consensus 148 ~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~--~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~ 225 (413)
T 3vla_A 148 ASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGS--TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTS 225 (413)
T ss_dssp CTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSC--SSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCS
T ss_pred ccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCC--CCCceEEEECCCcccccccccccCCceeEeecccCCcccc
Confidence 6689999999999999999998653 48999999974 3468999999954432 11367 999999987533
Q ss_pred --------CceEEEEEeEEEEcCEEeec--CCC-----CCCcEEEcccccccccCHHHHHHHHHHHHHhhc--CCCCCCC
Q 011482 328 --------ATFYILNLTGISIGGKQLQA--SGF-----AKGGILIDSGTVITRLPPSIYSALKAEFLKQFS--GFPSAPG 390 (484)
Q Consensus 328 --------~~~y~v~l~~i~vg~~~i~~--~~~-----~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~--~~~~~~~ 390 (484)
+.+|+|+|++|+||++.+.. ..| +.+++||||||++|+||+++|++|+++|.+++. .++...+
T Consensus 226 ~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~ 305 (413)
T 3vla_A 226 ATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVAS 305 (413)
T ss_dssp SSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECC
T ss_pred ccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCC
Confidence 26999999999999998653 233 246899999999999999999999999998875 4443333
Q ss_pred CcccccccccCCCc----ccccceEEEEEec-CcEEEEccCCeEEEEecCCCceEEEEEeCCC-CCCceEEchhhhcceE
Q 011482 391 FSILDTCFNLSAYQ----EVNIPLVKMEFEG-NAEMTVDVTGIVYFVKSDASQVCLALASLSY-EDETGIIGNYQQKNQR 464 (484)
Q Consensus 391 ~~~~~~C~~~~~~~----~~~~P~i~~~f~g-g~~~~l~~~~~~~~~~~~~~~~Cl~~~~~~~-~~~~~IlG~~fl~~~~ 464 (484)
...++.||+.++.. ...+|+|+|+|+| +++|+|++++|+++.+ ++.+|++|+.... ....||||+.|||++|
T Consensus 306 ~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~--~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~ 383 (413)
T 3vla_A 306 VAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIN--DNVVCLGVVDGGSNLRTSIVIGGHQLEDNL 383 (413)
T ss_dssp CTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEE--TTEEEECEEEEESSCSSSEEECHHHHTTEE
T ss_pred CCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeC--CCcEEEEEEecCCCcccceeEehhhhcCeE
Confidence 34456799876432 2479999999975 4899999999998864 4678998887543 2357999999999999
Q ss_pred EEEECCCCEEEEecC
Q 011482 465 VIYDTKNSQLGFAGE 479 (484)
Q Consensus 465 vvfD~~~~~IGFa~~ 479 (484)
+|||++++|||||++
T Consensus 384 vvfD~~~~riGfa~~ 398 (413)
T 3vla_A 384 VQFDLATSRVGFSGT 398 (413)
T ss_dssp EEEETTTTEEEEEEE
T ss_pred EEEECCCCEEEEEEe
Confidence 999999999999984
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=3.9e-56 Score=459.10 Aligned_cols=339 Identities=21% Similarity=0.377 Sum_probs=263.6
Q ss_pred ccccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCcccccc
Q 011482 119 NTEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHAL 196 (484)
Q Consensus 119 ~~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~ 196 (484)
...+||... ..+++|+++|.||| |++.|+|||||+++||+|.+| .+|+||+.++|.++.|...
T Consensus 9 ~~~~pl~~~--~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~-------------~~Sst~~~~~C~s~~C~~~ 73 (403)
T 3aup_A 9 LVVLPVQND--GSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ-------------YSSKTYQAPFCHSTQCSRA 73 (403)
T ss_dssp CEEEEEEEC--TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC-------------CCCSSCBCCCTTBHHHHHT
T ss_pred cEEEeeecC--CCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC-------------CCCCCCCccCCCCccccCc
Confidence 356888832 24567999999999 999999999999999999875 4799999999999999876
Q ss_pred cccC------CCCCCCCCCCCCCCeeeEEcC-CCceEeEEEEEEEEEecc-----------ccccceEEEEEeccC---C
Q 011482 197 EFAT------GNSGVCSSSSPPDCNYFVSYG-DGSYTRGELGREHLGLGK-----------ASVNDFIFGCGRNNK---G 255 (484)
Q Consensus 197 ~~~~------~~~~~C~~~~~~~C~~~~~Yg-dgs~~~G~~~~Dtltlg~-----------~~~~~~~fG~~~~~~---~ 255 (484)
.... .....|. ++.|.|.+.|+ ||+.+.|.+++|+|+|++ ..++++.|||++... +
T Consensus 74 ~~~~c~~c~~~~~s~~~---~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~ 150 (403)
T 3aup_A 74 NTHQCLSCPAASRPGCH---KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKG 150 (403)
T ss_dssp TCCCEEECSSSCBTTBC---SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSS
T ss_pred cccCccccCCCCCCCCC---CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccC
Confidence 4321 0112343 24699999998 788889999999999987 788999999999864 3
Q ss_pred CCCCcCeeeecCCCCCccccchhhc--cCCeeEEeeCCCCCCCCcceEEecCCCccc--c----CCCCeEEeeCcCCCCC
Q 011482 256 LFGGVSGLMGLGRSDLSLVSQTSEI--FGGLFSYCLPSTQDAGASGSLILGGNSSVF--K----NSTPITYTNMIPNPQL 327 (484)
Q Consensus 256 ~~~~~~GIlGLg~~~~Sl~~ql~~~--~~~~FS~~L~~~~~~~~~G~L~fGg~~~~~--~----~~~~~~~~pl~~~~~~ 327 (484)
.+..++||||||++.+|+++|+... ..++||+||++. ....|.|+||++..+| . ..+++.|+|++.++.
T Consensus 151 ~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~--~~~~G~l~fGgd~~~~~~~~G~~~~~~l~~~Pl~~~~~- 227 (403)
T 3aup_A 151 LPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRY--PTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQ- 227 (403)
T ss_dssp SSTTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSC--TTSCEEEEESCHHHHC--CTTCCTTTTEEEEECEECTT-
T ss_pred CCCCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCC--CCCCeeEEECCCchhccccccccccCceeecccccCCC-
Confidence 3457899999999999999998653 247999999874 3468999999955555 2 023899999998642
Q ss_pred CceEEEEEeEEEEcCEEe-e--cCCC-----CCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccc
Q 011482 328 ATFYILNLTGISIGGKQL-Q--ASGF-----AKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFN 399 (484)
Q Consensus 328 ~~~y~v~l~~i~vg~~~i-~--~~~~-----~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~ 399 (484)
.+|.|.|++|+||++.+ . ...+ +.+++||||||++++||+++|++|+++|.+++..++.......++.|++
T Consensus 228 -~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~ 306 (403)
T 3aup_A 228 -GEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFN 306 (403)
T ss_dssp -SCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEEC
T ss_pred -CcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEE
Confidence 59999999999999887 3 2222 1357999999999999999999999999877643322111112234554
Q ss_pred cCCCcccccceEEEEEecC--cEEEEccCCeEEEEecCCCceEEEEEeCCCC-CCceEEchhhhcceEEEEECCCCEEEE
Q 011482 400 LSAYQEVNIPLVKMEFEGN--AEMTVDVTGIVYFVKSDASQVCLALASLSYE-DETGIIGNYQQKNQRVIYDTKNSQLGF 476 (484)
Q Consensus 400 ~~~~~~~~~P~i~~~f~gg--~~~~l~~~~~~~~~~~~~~~~Cl~~~~~~~~-~~~~IlG~~fl~~~~vvfD~~~~~IGF 476 (484)
.+... .+|+|+|+|+|+ ++|+|++++|+++. .++.+|++|+..+.. .+.||||+.|||++|+|||++++||||
T Consensus 307 c~~~~--~~P~i~f~f~g~~~~~~~l~~~~y~~~~--~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf 382 (403)
T 3aup_A 307 SNKIN--AYPSVDLVMDKPNGPVWRISGEDLMVQA--QPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGF 382 (403)
T ss_dssp GGGCC--CCCCEEEEESSTTCCEEEECHHHHEEEC-----CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEE
T ss_pred CCCcC--cCCcEEEEEcCCCceEEEEcccceEEEc--CCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEE
Confidence 33222 689999999765 69999999999875 245789998876531 357999999999999999999999999
Q ss_pred -------ecCCCCC
Q 011482 477 -------AGEDCSS 483 (484)
Q Consensus 477 -------a~~~C~~ 483 (484)
++++|++
T Consensus 383 ~A~~~~~~~~~C~~ 396 (403)
T 3aup_A 383 STSSLHSHGVKCAD 396 (403)
T ss_dssp ESSCGGGGTCCGGG
T ss_pred ecccccccCCCccc
Confidence 7888875
No 3
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=8.5e-56 Score=451.03 Aligned_cols=307 Identities=22% Similarity=0.428 Sum_probs=254.1
Q ss_pred ccccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCcccccc
Q 011482 119 NTEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHAL 196 (484)
Q Consensus 119 ~~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~ 196 (484)
....||.+..+ .+|+++|.||| |++.|+|||||+++||+|..|..|.++.++.|||++|+||+..
T Consensus 45 ~~~~~l~n~~d---~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~---------- 111 (370)
T 3psg_A 45 IGDEPLENYLD---TEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEAT---------- 111 (370)
T ss_dssp SCCCTTGGGTT---CCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEE----------
T ss_pred cceecceeccC---CEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEEC----------
Confidence 35678888764 45999999999 9999999999999999999998777777889999999999953
Q ss_pred cccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCCC-C--CCcCeeeecCCCCCcc
Q 011482 197 EFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGL-F--GGVSGLMGLGRSDLSL 273 (484)
Q Consensus 197 ~~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~~-~--~~~~GIlGLg~~~~Sl 273 (484)
.|.|.+.|++|+. .|.+++|+|++++..++++.|||++...+. | ...+||||||++.++.
T Consensus 112 ----------------~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~ 174 (370)
T 3psg_A 112 ----------------SQELSITYGTGSM-TGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISA 174 (370)
T ss_dssp ----------------EEEEEEESSSCEE-EEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCG
T ss_pred ----------------CcEEEEEeCCceE-EEEEEEEEEeeCCcccCCeEEEEEEeecccccccCCccceeccCCccccc
Confidence 2599999999995 999999999999999999999999998762 3 3689999999987763
Q ss_pred ------ccchhhc---cCCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcCE
Q 011482 274 ------VSQTSEI---FGGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGK 343 (484)
Q Consensus 274 ------~~ql~~~---~~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~ 343 (484)
..++... ..++||+||.+. ....|.|+||| |.++|. +++.|+|+... .+|.|.+++|+|+++
T Consensus 175 ~~~~~~~~~l~~qg~i~~~~FS~~L~~~--~~~~G~l~fGg~D~~~y~--g~l~~~pv~~~----~~w~v~l~~i~v~g~ 246 (370)
T 3psg_A 175 SGATPVFDNLWDQGLVSQDLFSVYLSSN--DDSGSVVLLGGIDSSYYT--GSLNWVPVSVE----GYWQITLDSITMDGE 246 (370)
T ss_dssp GGCCCHHHHHHHTTCSSSSEEEEEEC-------CEEEEETCCCGGGBS--SCCEEEECSEE----TTEEEEECEEESSSS
T ss_pred cCCCCHHHHHHHCCCCCCCEEEEEEccC--CCCCeEEEEEeeChHhcC--Ccceeeccccc----ceeEEEEeEEEECCE
Confidence 2333322 257899999974 34589999999 666665 89999999875 799999999999998
Q ss_pred EeecCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEecCcEEEE
Q 011482 344 QLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTV 423 (484)
Q Consensus 344 ~i~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l 423 (484)
.+... ....+||||||++++||++++++|.+++.+.. ...+.+.++ |+... .+|+|+|+| ||++++|
T Consensus 247 ~~~~~--~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~----~~~g~~~v~-C~~~~-----~lP~i~f~~-~g~~~~l 313 (370)
T 3psg_A 247 TIACS--GGCQAIVDTGTSLLTGPTSAIANIQSDIGASE----NSDGEMVIS-CSSID-----SLPDIVFTI-DGVQYPL 313 (370)
T ss_dssp EEECT--TCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE----CTTCCEECC-GGGGG-----GCCCEEEEE-TTEEEEE
T ss_pred EEecC--CCceEEEcCCCCcEECCHHHHHHHHHHhCCcc----cCCCcEEEE-CCCcc-----cCCcEEEEE-CCEEEEE
Confidence 87532 14689999999999999999999999886542 234567776 99766 899999999 7899999
Q ss_pred ccCCeEEEEecCCCceEE-EEEeCCC---CCCceEEchhhhcceEEEEECCCCEEEEecCC
Q 011482 424 DVTGIVYFVKSDASQVCL-ALASLSY---EDETGIIGNYQQKNQRVIYDTKNSQLGFAGED 480 (484)
Q Consensus 424 ~~~~~~~~~~~~~~~~Cl-~~~~~~~---~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~ 480 (484)
++++|+++ .+..|+ +|...+. .+..||||++|||++|+|||.+++|||||+++
T Consensus 314 ~~~~yi~~----~~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 314 SPSAYILQ----DDDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp CHHHHEEE----CSSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CHHHhccc----CCCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 99999987 234698 5766432 23469999999999999999999999999974
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.5e-55 Score=446.59 Aligned_cols=312 Identities=26% Similarity=0.456 Sum_probs=251.9
Q ss_pred cccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCC--CCCCCCCCCCCCCCCCCcceecCCCccccc
Q 011482 120 TEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCK--SCYNQQDPVFDPSISPSYKKVLCNSSTCHA 195 (484)
Q Consensus 120 ~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~--~C~~~~~~~ydps~Sst~~~v~C~s~~C~~ 195 (484)
..+||.+.. +++|+++|.||| |++.|+|||||+++||+|.+|. .|. .++.|||++|+||+.
T Consensus 13 ~~~~l~n~~---~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~--~~~~y~~~~SsT~~~---------- 77 (351)
T 1tzs_A 13 AKEPLINYL---DMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACK--THSRFQPSQSSTYSQ---------- 77 (351)
T ss_dssp -CCTTGGGS---SSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGT--TSCCBCGGGCTTCBC----------
T ss_pred cceeceecC---CCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccC--CCCcCCcccCcceEE----------
Confidence 457887643 456999999999 9999999999999999999997 565 468999999999983
Q ss_pred ccccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCCC-C--CCcCeeeecCCCCCc
Q 011482 196 LEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGL-F--GGVSGLMGLGRSDLS 272 (484)
Q Consensus 196 ~~~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~~-~--~~~~GIlGLg~~~~S 272 (484)
..|.|.+.|++|+. .|.+++|+|++++..++++.|||++...+. | ...+||||||+..++
T Consensus 78 ----------------~~~~~~i~Yg~Gs~-~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s 140 (351)
T 1tzs_A 78 ----------------PGQSFSIQYGTGSL-SGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLA 140 (351)
T ss_dssp ----------------CSCEEEEESSSCEE-EEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGS
T ss_pred ----------------CCCEEEEEeCCCCe-EEEEEEeEEEECCeEECCeEEEEEEeccccccccCCCceEEecCCcccc
Confidence 23799999999985 899999999999999999999999988762 3 368999999998876
Q ss_pred c------ccchhhc---cCCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcC
Q 011482 273 L------VSQTSEI---FGGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGG 342 (484)
Q Consensus 273 l------~~ql~~~---~~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~ 342 (484)
. +.|+... ..++||+||.+..+....|.|+||| +.++|. +++.|+|+... .+|.|.|++|+|++
T Consensus 141 ~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~--g~l~~~p~~~~----~~~~v~l~~i~v~~ 214 (351)
T 1tzs_A 141 VGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFS--GSLNWVPVTKQ----AYWQIALDNIQVGG 214 (351)
T ss_dssp GGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBC--SCCEEEECSEE----TTEEEEEEEEEETT
T ss_pred ccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcC--CceEEEecCCC----ceEEEEeCEEEECC
Confidence 3 3334332 2589999999752222479999999 656665 89999999864 79999999999999
Q ss_pred EEeecCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEecCcEEE
Q 011482 343 KQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMT 422 (484)
Q Consensus 343 ~~i~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~ 422 (484)
+.+... ....+||||||++++||+++|++|.+++.+... . +.+.++ |++.. .+|+|+|+| +|++++
T Consensus 215 ~~~~~~--~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~----~-g~~~~~-C~~~~-----~~P~i~f~f-~g~~~~ 280 (351)
T 1tzs_A 215 TVMFCS--EGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPV----D-GEYAVE-CANLN-----VMPDVTFTI-NGVPYT 280 (351)
T ss_dssp EEEECT--TCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC----S-SSEEEC-GGGGG-----GSCCEEEEE-TTEEEE
T ss_pred ceEEcC--CCceEEeccCCcceeCCHHHHHHHHHHhCCccc----C-CeEEEe-CCCCc-----cCCcEEEEE-CCEEEE
Confidence 885422 136899999999999999999999999865421 1 556676 99765 789999999 789999
Q ss_pred EccCCeEEEEecCCCceEE-EEEeCCC---CCCceEEchhhhcceEEEEECCCCEEEEecCCCCC
Q 011482 423 VDVTGIVYFVKSDASQVCL-ALASLSY---EDETGIIGNYQQKNQRVIYDTKNSQLGFAGEDCSS 483 (484)
Q Consensus 423 l~~~~~~~~~~~~~~~~Cl-~~~~~~~---~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~C~~ 483 (484)
|++++|+++....+...|+ +|...+. ..+.||||+.|||++|+|||++++|||||+++|.+
T Consensus 281 i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s 345 (351)
T 1tzs_A 281 LSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWS 345 (351)
T ss_dssp ECTTTSEECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC---
T ss_pred ECHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCccc
Confidence 9999999875322346899 6876531 24689999999999999999999999999999964
No 5
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.2e-55 Score=443.46 Aligned_cols=300 Identities=25% Similarity=0.387 Sum_probs=249.5
Q ss_pred cceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCcccccccccCCCCCCCCC
Q 011482 131 QTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFATGNSGVCSS 208 (484)
Q Consensus 131 ~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~~~~~~~~~~C~~ 208 (484)
.+++|+++|.||| |++.|+|||||+++||+|.+|..|.++.++.|||++|+||+.++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~~y~~~~SsT~~~~~--------------------- 71 (329)
T 3c9x_A 13 ADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSATGHAIYTPSKSSTSKKVS--------------------- 71 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCGGGCTTCEECT---------------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccCCCCcCCcccCcCceEcC---------------------
Confidence 4567999999999 99999999999999999999999988888999999999999641
Q ss_pred CCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCCCC---CCcCeeeecCCCCCcccc---------c
Q 011482 209 SSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGLF---GGVSGLMGLGRSDLSLVS---------Q 276 (484)
Q Consensus 209 ~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~~~---~~~~GIlGLg~~~~Sl~~---------q 276 (484)
.|.|.+.|+||+.+.|.+++|+|++++..++++.|||++...+.+ ...+||||||+..++.++ +
T Consensus 72 ----~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~ 147 (329)
T 3c9x_A 72 ----GASWSISYGDGSSSSGDVYTDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSN 147 (329)
T ss_dssp ----TCBEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred ----CCeEEEEeCCCCcEEEEEEEEEEEECCEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHH
Confidence 269999999999789999999999999999999999999876643 478999999998776433 3
Q ss_pred hhhcc-CCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcCEEeecCCCCCCc
Q 011482 277 TSEIF-GGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQASGFAKGG 354 (484)
Q Consensus 277 l~~~~-~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~i~~~~~~~~~ 354 (484)
+.... .++||+||.+. ..|.|+||| +.++|. +++.|+|+.... .+|.|.+++|+|+++.+... ...
T Consensus 148 l~~~i~~~~FS~~l~~~----~~G~l~fGg~d~~~~~--g~l~~~p~~~~~---~~~~v~l~~i~v~~~~~~~~---~~~ 215 (329)
T 3c9x_A 148 AASSLAEPLFTADLRHG----QNGSYNFGYIDTSVAK--GPVAYTPVDNSQ---GFWEFTASGYSVGGGKLNRN---SID 215 (329)
T ss_dssp HHTTSSSSEEEEECCSS----SCEEEEESSCCGGGCS--SCEEEEECBCTT---SSCEEEECCEEETTCCCCSC---CEE
T ss_pred HHHhcCCCEEEEEecCC----CCcEEEEeCcChhhcc--cceEEEEccCCC---ceEEEEEeeEEECCEeccCC---Cce
Confidence 32222 57899999853 589999999 656664 899999998542 68999999999999887543 368
Q ss_pred EEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEecCcEEEEccCCeEEEEec
Q 011482 355 ILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKS 434 (484)
Q Consensus 355 ~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~ 434 (484)
+||||||++++||++++++|.+++..+. +....+.+.++ |+. .+|+|+|+| +|++++||+++|++....
T Consensus 216 aiiDSGTt~~~lp~~~~~~i~~~i~~a~--~~~~~~~~~~~-C~~-------~~P~i~f~f-~g~~~~ip~~~~~~~~~~ 284 (329)
T 3c9x_A 216 GIADTGTTLLLLDDNVVDAYYANVQSAQ--YDNQQEGVVFD-CDE-------DLPSFSFGV-GSSTITIPGDLLNLTPLE 284 (329)
T ss_dssp EEECTTCCSEEECHHHHHHHHTTCTTCE--EETTTTEEEEE-TTC-------CCCCEEEEE-TTEEEEECGGGGEEEESS
T ss_pred EEEECCCCcEeCCHHHHHHHHHhCCCcE--EcCCCCEEEEE-CCC-------CCCcEEEEE-CCEEEEECHHHeeeeccC
Confidence 9999999999999999999998774332 12223556676 983 789999999 589999999999987532
Q ss_pred CCCceEEE-EEeCCCCCCceEEchhhhcceEEEEECCCCEEEEecC
Q 011482 435 DASQVCLA-LASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGE 479 (484)
Q Consensus 435 ~~~~~Cl~-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~ 479 (484)
.+...|++ |...+ ..+.||||+.|||++|+|||++++|||||+.
T Consensus 285 ~~~~~C~~~i~~~~-~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 285 EGSSTCFGGLQSSS-GIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp TTCSEEEESEEECT-TTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred CCCCeEEEEEEcCC-CCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 23478995 66543 3468999999999999999999999999974
No 6
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=4.8e-55 Score=438.40 Aligned_cols=296 Identities=22% Similarity=0.401 Sum_probs=247.4
Q ss_pred cceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCcccccccccCCCCCCCCC
Q 011482 131 QTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFATGNSGVCSS 208 (484)
Q Consensus 131 ~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~~~~~~~~~~C~~ 208 (484)
.+++|+++|.||| |++.|+|||||+++||+|.+|..| .+.++.|||++|+||+..
T Consensus 13 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~~~~~y~~~~SsT~~~~---------------------- 69 (325)
T 2apr_A 13 NDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GSGQTKYDPNQSSTYQAD---------------------- 69 (325)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CTTSCCBCGGGCTTCEEE----------------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hcCCCCCCcccCCCeeeC----------------------
Confidence 4567999999999 999999999999999999999999 777899999999999942
Q ss_pred CCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCCCC--CCcCeeeecCCCCCcc-------ccchhh
Q 011482 209 SSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGLF--GGVSGLMGLGRSDLSL-------VSQTSE 279 (484)
Q Consensus 209 ~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~~~--~~~~GIlGLg~~~~Sl-------~~ql~~ 279 (484)
.|.|.+.|+||+.+.|.+++|+|++++..++++.|||++...+.| ...+||||||+..++. +.|+..
T Consensus 70 ----~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~ 145 (325)
T 2apr_A 70 ----GRTWSISYGDGSSASGILAKDNVNLGGLLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLIS 145 (325)
T ss_dssp ----EEEEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHH
T ss_pred ----CCEEEEEECCCCCEEEEEEEEEEEECCEEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHHHHh
Confidence 269999999999889999999999999999999999999876643 2489999999987653 344443
Q ss_pred c---cCCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcCEEeecCCCCCCcE
Q 011482 280 I---FGGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQASGFAKGGI 355 (484)
Q Consensus 280 ~---~~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~i~~~~~~~~~~ 355 (484)
. ..++||+||.+. .....|.|+||+ +..+|. +++.|+|+.... .+|.|.+++|+||+ .+... ...+
T Consensus 146 qg~i~~~~FS~~l~~~-~~~~~G~l~fGg~d~~~~~--g~l~~~p~~~~~---~~~~v~l~~i~vg~-~~~~~---~~~~ 215 (325)
T 2apr_A 146 QGLISRPIFGVYLGKA-KNGGGGEYIFGGYDSTKFK--GSLTTVPIDNSR---GWWGITVDRATVGT-STVAS---SFDG 215 (325)
T ss_dssp TTSCSSSEEEEEECCG-GGTCCEEEEETCCCGGGBC--SCCEEEECBCTT---SSCEEEECEEEETT-EEEEC---CEEE
T ss_pred cCCCCCceEEEEecCC-CCCCCCEEEEccCCchhcc--CceEEEEccCCC---CEEEEEEeEEEECC-EecCC---CceE
Confidence 2 257899999753 234589999999 666665 899999997542 68999999999999 44433 3689
Q ss_pred EEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEecCcEEEEccCCeEEEEecC
Q 011482 356 LIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKSD 435 (484)
Q Consensus 356 iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~~ 435 (484)
||||||++++||+++|++|.++|.+++... +.+.++ |+. . .+|+|+|+|+ |.+++||+++|++...
T Consensus 216 iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~----g~~~~~-C~~-~-----~~p~i~f~f~-g~~~~ip~~~~~~~~~-- 281 (325)
T 2apr_A 216 ILDTGTTLLILPNNIAASVARAYGASDNGD----GTYTIS-CDT-S-----AFKPLVFSIN-GASFQVSPDSLVFEEF-- 281 (325)
T ss_dssp EECTTCSSEEEEHHHHHHHHHHHTCEECSS----SCEEEC-SCG-G-----GCCCEEEEET-TEEEEECGGGGEEEEE--
T ss_pred EEecCCccEECCHHHHHHHHHHHhcccCCC----CeEEEE-CCC-C-----CCCcEEEEEC-CEEEEECHHHEEEcCC--
Confidence 999999999999999999999998765422 456676 984 1 5899999995 5699999999998753
Q ss_pred CCceEEE-EEeCCCCCCceEEchhhhcceEEEEECCCCEEEEecCC
Q 011482 436 ASQVCLA-LASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGED 480 (484)
Q Consensus 436 ~~~~Cl~-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~ 480 (484)
+..|++ |...+ .+.||||+.|||++|+|||++++|||||+++
T Consensus 282 -~~~C~~~i~~~~--~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 282 -QGQCIAGFGYGN--WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp -TTEEEESEEEES--SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred -CCeEEEEEEcCC--CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 578995 55443 3679999999999999999999999999864
No 7
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.9e-55 Score=442.03 Aligned_cols=299 Identities=23% Similarity=0.384 Sum_probs=247.6
Q ss_pred cceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCcccccccccCCCCCCCCC
Q 011482 131 QTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFATGNSGVCSS 208 (484)
Q Consensus 131 ~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~~~~~~~~~~C~~ 208 (484)
.+++|+++|.||| |++.|+|||||+++||+|.+|..|.+ .++.|||++|+||+.++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-~~~~y~~~~SsT~~~~~--------------------- 70 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV-XQTIYTPSKSTTAKLLS--------------------- 70 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC--CCCBCGGGCTTCEEEE---------------------
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc-ccCccCCccCccceecC---------------------
Confidence 3457999999999 99999999999999999999998877 77899999999999652
Q ss_pred CCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCCCC---CCcCeeeecCCCCCccc---------cc
Q 011482 209 SSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGLF---GGVSGLMGLGRSDLSLV---------SQ 276 (484)
Q Consensus 209 ~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~~~---~~~~GIlGLg~~~~Sl~---------~q 276 (484)
.|.|.+.|++|+.+.|.+++|+|++++..++++.|||++...+.+ ...+||||||+..++.+ .|
T Consensus 71 ----~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~ 146 (329)
T 1oew_A 71 ----GATWSISYGDGSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDN 146 (329)
T ss_dssp ----EEEEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred ----CCeEEEEeCCCCcEEEEEEEEEEEECCEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHH
Confidence 259999999999779999999999999999999999999876643 46899999999877643 33
Q ss_pred hhhcc-CCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcCEEeecCCCCCCc
Q 011482 277 TSEIF-GGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQASGFAKGG 354 (484)
Q Consensus 277 l~~~~-~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~i~~~~~~~~~ 354 (484)
+.... .++||+||.+. ..|.|+||| +.++|. +++.|+|+.... .+|.|.+++|+|+++.+... ...
T Consensus 147 l~~~i~~~~FS~~L~~~----~~G~l~fGg~d~~~~~--g~l~~~p~~~~~---~~~~v~l~~i~v~~~~~~~~---~~~ 214 (329)
T 1oew_A 147 AKASLDSPVFTADLGYH----APGTYNFGFIDTTAYT--GSITYTAVSTKQ---GFWEWTSTGYAVGSGTFKST---SID 214 (329)
T ss_dssp HTTTSSSSEEEEECCSS----SCEEEEESCCCTTSSS--SCCEEEECBCTT---SSCEEEEEEEEETTSCCEEE---EEE
T ss_pred HHHhccCcEEEEEccCC----CCeEEEEeccChHhcc--cceEEEEccCCC---ceEEEEEeeEEECCeeccCC---Cce
Confidence 33222 57899999853 489999999 666664 899999998542 68999999999999876533 358
Q ss_pred EEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEecCcEEEEccCCeEEEEec
Q 011482 355 ILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKS 434 (484)
Q Consensus 355 ~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~ 434 (484)
+||||||++++||++++++|.+++..+. +....+.+.++ |+. .+|+|+|+| ||++++||+++|++....
T Consensus 215 aiiDSGTt~~~lP~~~~~~l~~~i~~a~--~~~~~g~~~~~-C~~-------~~P~i~f~f-gg~~~~ip~~~~~~~~~~ 283 (329)
T 1oew_A 215 GIADTGTTLLYLPATVVSAYWAQVSGAK--SSSSVGGYVFP-CSA-------TLPSFTFGV-GSARIVIPGDYIDFGPIS 283 (329)
T ss_dssp EEECTTCCSEEECHHHHHHHHTTSTTCE--EETTTTEEEEE-TTC-------CCCCEEEEE-TTEEEEECHHHHEEEESS
T ss_pred EEEeCCCCCEECCHHHHHHHHHhCCCcE--EcCCCCEEEEE-CCC-------CCCcEEEEE-CCEEEEECHHHeeeeecC
Confidence 9999999999999999999998774322 12233556676 984 789999999 789999999999987532
Q ss_pred CCCceEEE-EEeCCCCCCceEEchhhhcceEEEEEC-CCCEEEEecC
Q 011482 435 DASQVCLA-LASLSYEDETGIIGNYQQKNQRVIYDT-KNSQLGFAGE 479 (484)
Q Consensus 435 ~~~~~Cl~-~~~~~~~~~~~IlG~~fl~~~~vvfD~-~~~~IGFa~~ 479 (484)
.+...|++ |...+ ..+.||||++|||++|+|||+ +++|||||+.
T Consensus 284 ~~~~~C~~~i~~~~-~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 284 TGSSSCFGGIQSSA-GIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp TTCSEEEESEEEST-TTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred CCCCeEEEEEEeCC-CCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 23578996 66544 346899999999999999999 9999999974
No 8
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=2.2e-55 Score=449.12 Aligned_cols=307 Identities=21% Similarity=0.393 Sum_probs=253.8
Q ss_pred cccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCC----CCCCCCCCCCCCCCCCCcceecCCCccc
Q 011482 120 TEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCK----SCYNQQDPVFDPSISPSYKKVLCNSSTC 193 (484)
Q Consensus 120 ~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~----~C~~~~~~~ydps~Sst~~~v~C~s~~C 193 (484)
..+||.+.. +.+|+++|.||| |+|.|+|||||+++||+|.+|. .|.. ++.|||++|+||+..
T Consensus 51 ~~~~l~n~~---~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~--~~~y~~~~SsT~~~~------- 118 (383)
T 2x0b_A 51 SSVILTNYM---DTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY--HKLFDASDSSSYKHN------- 118 (383)
T ss_dssp CEEEEEEET---TTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHT--SCCBCGGGCTTCEEE-------
T ss_pred ceEeeeecC---CCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccC--CCCCCCCCCCcEEEC-------
Confidence 457888754 346999999999 9999999999999999999995 5865 579999999999952
Q ss_pred ccccccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCC-CC--CCcCeeeecCCCC
Q 011482 194 HALEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKG-LF--GGVSGLMGLGRSD 270 (484)
Q Consensus 194 ~~~~~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~-~~--~~~~GIlGLg~~~ 270 (484)
.|.|.+.|++|+. .|.+++|+|++++..++ +.|||++...+ .| ..++||||||+..
T Consensus 119 -------------------~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~ 177 (383)
T 2x0b_A 119 -------------------GTELTLRYSTGTV-SGFLSQDIITVGGITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIE 177 (383)
T ss_dssp -------------------EEEEEEECSSCEE-EEEEEEEEEEETTEEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGG
T ss_pred -------------------CcEEEEEcCCccE-EEEEEeeEEEEcCceEE-EEEEEEEecCCcccccCCCceEeccCCCc
Confidence 2699999999985 89999999999999999 99999999876 22 4789999999998
Q ss_pred Cccc------cchhhc---cCCeeEEeeCCCCCCC---CcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeE
Q 011482 271 LSLV------SQTSEI---FGGLFSYCLPSTQDAG---ASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTG 337 (484)
Q Consensus 271 ~Sl~------~ql~~~---~~~~FS~~L~~~~~~~---~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~ 337 (484)
++.. .++... ..++||+||.+. ... ..|.|+||| |.++|. +++.|+|+... .+|.|.|++
T Consensus 178 ~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~-~~~~~~~~G~l~fGg~d~~~y~--G~l~~~pv~~~----~~w~v~l~~ 250 (383)
T 2x0b_A 178 QAIGRVTPIFDNIISQGVLKEDVFSFYYNRD-SENSQSLGGQIVLGGSDPQHYE--GNFHYINLIKT----GVWQIQMKG 250 (383)
T ss_dssp GCGGGCCCHHHHHHTTTCCSSSEEEEEECCS-CC----CCEEEEESSCCGGGEE--EEEEEEEBSST----TSCEEEECE
T ss_pred cccCCCCcHHHHHHhCCCCCCCEEEEEEcCC-CCcccCCCcEEEECCcChHHcC--CceEEEEcCCC----ceEEEEEeE
Confidence 7632 223221 258999999875 222 389999999 656665 89999999875 799999999
Q ss_pred EEEcCEEeecCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEec
Q 011482 338 ISIGGKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEG 417 (484)
Q Consensus 338 i~vg~~~i~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~g 417 (484)
|+|+++.+... ....+||||||+++++|++++++|.+++.+.. ..+.+.++ |++.. .+|+|+|+| |
T Consensus 251 i~v~~~~~~~~--~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-----~~g~~~v~-C~~~~-----~~P~i~f~~-~ 316 (383)
T 2x0b_A 251 VSVGSSTLLCE--DGCLALVDTGASYISGSTSSIEKLMEALGAKK-----RLFDYVVK-CNEGP-----TLPDISFHL-G 316 (383)
T ss_dssp EEESSCCCBST--TCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-----CSSCEEEE-GGGTT-----TCCCEEEEE-T
T ss_pred EEeCCceEEcC--CCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc-----cCCcEEEe-ccccc-----cCceEEEEE-C
Confidence 99999875322 24689999999999999999999999986542 35567776 99876 799999999 6
Q ss_pred CcEEEEccCCeEEEEecCCCceEE-EEEeCCC---CCCceEEchhhhcceEEEEECCCCEEEEecCC
Q 011482 418 NAEMTVDVTGIVYFVKSDASQVCL-ALASLSY---EDETGIIGNYQQKNQRVIYDTKNSQLGFAGED 480 (484)
Q Consensus 418 g~~~~l~~~~~~~~~~~~~~~~Cl-~~~~~~~---~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~ 480 (484)
|++++|++++|+++....++..|+ +|...+. ..+.||||++|||++|+|||.+++|||||+++
T Consensus 317 g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 317 GKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp TEEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CEEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 899999999999875332356899 6876531 24689999999999999999999999999864
No 9
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.1e-54 Score=436.60 Aligned_cols=307 Identities=27% Similarity=0.469 Sum_probs=252.5
Q ss_pred cccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCccccccc
Q 011482 120 TEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALE 197 (484)
Q Consensus 120 ~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~~ 197 (484)
..+||.+.. +++|+++|.||| |++.|+|||||+++||+|.+|..|.+..++.|||++|+||+.
T Consensus 3 ~~~~l~~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~------------ 67 (329)
T 1dpj_A 3 HDVPLTNYL---NAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSYKA------------ 67 (329)
T ss_dssp EEEECEEET---TTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEE------------
T ss_pred cceeeeecC---CCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCcCcCCcccCcCeEE------------
Confidence 457887754 356999999999 999999999999999999999873323357999999999984
Q ss_pred ccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCC-C--CCCcCeeeecCCCCCccc
Q 011482 198 FATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKG-L--FGGVSGLMGLGRSDLSLV 274 (484)
Q Consensus 198 ~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~-~--~~~~~GIlGLg~~~~Sl~ 274 (484)
..|.|.+.|++|+ +.|.+++|+|++++..++++.|||++...+ . ....+||||||+..+++.
T Consensus 68 --------------~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~ 132 (329)
T 1dpj_A 68 --------------NGTEFAIQYGTGS-LEGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVD 132 (329)
T ss_dssp --------------EEEEEEEEETTEE-EEEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGG
T ss_pred --------------CCcEEEEEECCce-EEEEEEEEEEEECCeEECCeEEEEEEecCccccccCCcceEEEeCCchhhcc
Confidence 2369999999995 599999999999999999999999998765 2 246899999999987643
Q ss_pred c------chhhc---cCCeeEEeeCCCC-CCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcCE
Q 011482 275 S------QTSEI---FGGLFSYCLPSTQ-DAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGK 343 (484)
Q Consensus 275 ~------ql~~~---~~~~FS~~L~~~~-~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~ 343 (484)
. ++... ..++||+||.+.. +....|.|+||+ +.++|. +++.|+|+... .+|.|.+++|+|+++
T Consensus 133 ~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~--g~l~~~p~~~~----~~~~v~l~~i~v~~~ 206 (329)
T 1dpj_A 133 KVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFK--GDITWLPVRRK----AYWEVKFEGIGLGDE 206 (329)
T ss_dssp GCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEE--EEEEEEECSSB----TTBEEEEEEEEETTE
T ss_pred CCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcC--CceEEEEcCCC----ceEEEEeeeEEECCe
Confidence 2 23222 2579999998641 123479999999 656665 89999999864 799999999999999
Q ss_pred EeecCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEecCcEEEE
Q 011482 344 QLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTV 423 (484)
Q Consensus 344 ~i~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l 423 (484)
.+... ...+||||||++++||++++++|.+++.+. ....+.+.++ |+... .+|+|+|+| +|++++|
T Consensus 207 ~~~~~---~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~----~~~~g~~~~~-C~~~~-----~~P~i~f~f-~g~~~~i 272 (329)
T 1dpj_A 207 YAELE---SHGAAIDTGTSLITLPSGLAEMINAEIGAK----KGWTGQYTLD-CNTRD-----NLPDLIFNF-NGYNFTI 272 (329)
T ss_dssp EEECS---SCEEEECTTCSCEEECHHHHHHHHHHHTCE----ECTTSSEEEC-GGGGG-----GCCCEEEEE-TTEEEEE
T ss_pred EecCC---CccEEeeCCCCcEECCHHHHHHHHHHhCCc----cCCCCeEEEE-CCCCC-----cCCcEEEEE-CCEEEEE
Confidence 87643 468999999999999999999999998654 2234566676 98765 789999999 6799999
Q ss_pred ccCCeEEEEecCCCceEE-EEEeCC---CCCCceEEchhhhcceEEEEECCCCEEEEecCC
Q 011482 424 DVTGIVYFVKSDASQVCL-ALASLS---YEDETGIIGNYQQKNQRVIYDTKNSQLGFAGED 480 (484)
Q Consensus 424 ~~~~~~~~~~~~~~~~Cl-~~~~~~---~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~ 480 (484)
++++|+++.. ..|+ +|...+ ...+.||||++|||++|+|||++++|||||+++
T Consensus 273 ~~~~y~~~~~----~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 273 GPYDYTLEVS----GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp CTTTSEEEET----TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CHHHhEecCC----CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 9999998752 5898 687653 234689999999999999999999999999874
No 10
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.1e-54 Score=435.89 Aligned_cols=299 Identities=24% Similarity=0.362 Sum_probs=248.7
Q ss_pred cceeEEEEEEEcCEEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCcccccccccCCCCCCCCCCC
Q 011482 131 QTLNYIATIELGGRNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFATGNSGVCSSSS 210 (484)
Q Consensus 131 ~~~~Y~~~v~iGtq~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~~~~~~~~~~C~~~~ 210 (484)
.+++|+++|.||.|++.|+|||||+++||+|.+|..|.++.++.|||++|+ ++.
T Consensus 12 ~~~~Y~~~i~iG~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~------------------------- 65 (325)
T 1ibq_A 12 NDEEYLTPVTVGKSTLHLDFDTGSADLWVFSDELPSSEQTGHDLYTPSSSA-TKL------------------------- 65 (325)
T ss_dssp TTSCEEEEEEEBTEEEEEEEETTCCCEEEECTTSCHHHHTTSCCCBCCSSC-EEC-------------------------
T ss_pred CCCEEEEEEEECCEEEEEEEeCCCccceEeeCCCCccccCCCCCCCchhcC-Ccc-------------------------
Confidence 345799999999999999999999999999999998887888999999998 541
Q ss_pred CCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCCCC---CCcCeeeecCCCCCcc---------ccchh
Q 011482 211 PPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGLF---GGVSGLMGLGRSDLSL---------VSQTS 278 (484)
Q Consensus 211 ~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~~~---~~~~GIlGLg~~~~Sl---------~~ql~ 278 (484)
..|.|.+.|+||+.+.|.+++|+|++++..++++.|||++...+.+ ...+||||||+..++. .+|+.
T Consensus 66 -~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~ 144 (325)
T 1ibq_A 66 -SGYSWDISYGDGSSASGDVYRDTVTVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVK 144 (325)
T ss_dssp -TTCBEEEECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHG
T ss_pred -CCCEEEEEeCCCCEEEEEEEEeEEEECCEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHH
Confidence 2379999999999779999999999999999999999999876633 3689999999987664 34554
Q ss_pred hcc-CCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcCEEeecCCCCCCcEE
Q 011482 279 EIF-GGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQASGFAKGGIL 356 (484)
Q Consensus 279 ~~~-~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~i~~~~~~~~~~i 356 (484)
... .++||+||.+. ..|.|+||| +.++|. +++.|+|+... ..+|.|.+++|+|+++.+... ...+|
T Consensus 145 ~~i~~~~FS~~l~~~----~~G~l~fGg~d~~~~~--g~l~~~p~~~~---~~~w~v~l~~i~v~~~~~~~~---~~~ai 212 (325)
T 1ibq_A 145 SQLDSPLFAVQLKHD----APGVYDFGYIDDSKYT--GSITYTDADSS---QGYWGFSTDGYSIGDGSSSSS---GFSAI 212 (325)
T ss_dssp GGSSSSEEEEEEETT----EEEEEEESSCCGGGBS--SCCEEEECBCT---TSSCEEEECEEEETTSCCBSC---CEEEE
T ss_pred HhcCCcEEEEEecCC----CCceEEECCcChhhcc--CceEEEEcCCC---CceEEEEECcEEECCeeccCC---CceEE
Confidence 332 57999999853 489999999 656664 89999999853 268999999999999877533 46899
Q ss_pred EcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEecCcEEEEccCCeEEEEecCC
Q 011482 357 IDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKSDA 436 (484)
Q Consensus 357 iDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~~~ 436 (484)
|||||++++||+++|++|.+++..+. +....+.+.++ |+. .+|+|+|+| ||++++||+++|++.....+
T Consensus 213 iDSGTt~~~lP~~~~~~i~~~i~~a~--~~~~~g~~~~~-C~~-------~~P~i~f~f-gg~~~~i~~~~~~~~~~~~~ 281 (325)
T 1ibq_A 213 ADTGTTLILLDDEIVSAYYEQVSGAQ--ESYEAGGYVFS-CST-------DLPDFTVVI-GDYKAVVPGKYINYAPVSTG 281 (325)
T ss_dssp ECTTCCSEEECHHHHHHHHTTSTTCB--CCSSSSSCEEE-TTC-------CCCCEEEEE-TTEEEEECHHHHEEEESSTT
T ss_pred EeCCCCcEeCCHHHHHHHHHhCCCce--EcCcCCeEEEE-cCC-------CCCcEEEEE-CCEEEEECHHHhcccccCCC
Confidence 99999999999999999998874332 22234566776 984 789999999 78999999999998753223
Q ss_pred CceEEE-EEeCCCCCCceEEchhhhcceEEEEECCCCEEEEecCC
Q 011482 437 SQVCLA-LASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGED 480 (484)
Q Consensus 437 ~~~Cl~-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~ 480 (484)
...|++ |.+.+ ..+.||||++|||++|+|||++++|||||+++
T Consensus 282 ~~~C~~~i~~~~-~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 282 SSTCYGGIQSNS-GLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp CSEEEESEEECT-TTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCeEEEEEEcCC-CCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 478995 66643 24689999999999999999999999999864
No 11
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.2e-54 Score=438.71 Aligned_cols=305 Identities=22% Similarity=0.424 Sum_probs=250.8
Q ss_pred cccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecC--CCCCC-------CCCCCCCCCCCCCCCcceecC
Q 011482 120 TEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQ--PCKSC-------YNQQDPVFDPSISPSYKKVLC 188 (484)
Q Consensus 120 ~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~--~C~~C-------~~~~~~~ydps~Sst~~~v~C 188 (484)
..+|+.+. +++|+++|.||| |++.|+|||||+++||+|. +|..| .++.++.|||++|+||+..
T Consensus 3 v~~~l~~~----~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~-- 76 (342)
T 2qzx_A 3 VAVTLHNE----AITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNL-- 76 (342)
T ss_dssp EEEEEEEC----SSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEE--
T ss_pred eeEEEecC----CeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccC--
Confidence 45677663 357999999999 9999999999999999866 77643 1234679999999999953
Q ss_pred CCcccccccccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCCCCCCcCeeeecCC
Q 011482 189 NSSTCHALEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGLFGGVSGLMGLGR 268 (484)
Q Consensus 189 ~s~~C~~~~~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~~~~~~~GIlGLg~ 268 (484)
.|.|.+.|+||+.+.|.+++|+|++++..++++.|||++... ..+||||||+
T Consensus 77 ------------------------~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~----~~~GilGLg~ 128 (342)
T 2qzx_A 77 ------------------------NTRFDIKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWSTS----ARKGILGIGF 128 (342)
T ss_dssp ------------------------EEEEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEC----SSSCEEECSC
T ss_pred ------------------------CCcEEEEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEecC----CCcCEEEEcc
Confidence 269999999999889999999999999999999999999864 5789999999
Q ss_pred CCC--------ccccchhhc---cCCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEe
Q 011482 269 SDL--------SLVSQTSEI---FGGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLT 336 (484)
Q Consensus 269 ~~~--------Sl~~ql~~~---~~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~ 336 (484)
... +++.|+... ..++||+||.+. ....|.|+||| +.++|. +++.|+|+... .+|.|.++
T Consensus 129 ~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~--~~~~G~l~fGg~d~~~~~--g~l~~~p~~~~----~~~~v~l~ 200 (342)
T 2qzx_A 129 QSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSA--EASTGQIIFGGIDKAKYS--GSLVDLPITSE----KKLTVGLR 200 (342)
T ss_dssp GGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCT--TCSEEEEEETEEETTSBS--SCCEEEECCCS----SSCEEEEE
T ss_pred ccccCCCccCccHHHHHHHCCCcCccEEEEEeCCC--CCCCeEEEECccchhhEe--cceEEEeccCC----ceEEEEEe
Confidence 865 455566543 257899999864 35689999999 667775 89999999875 58999999
Q ss_pred EEEEcCEEeecCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEe
Q 011482 337 GISIGGKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFE 416 (484)
Q Consensus 337 ~i~vg~~~i~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~ 416 (484)
+|+|+++.+... ..+||||||++++||+++|++|++++.+.+...+...+.+.++ |+ .+|.|+|+|.
T Consensus 201 ~i~v~g~~~~~~----~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~~~~~~~~~-C~--------~~p~i~f~f~ 267 (342)
T 2qzx_A 201 SVNVRGRNVDAN----TNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSAGNKVYVAD-CK--------TSGTIDFQFG 267 (342)
T ss_dssp EEEETTEEEEEE----EEEEECTTCSSEEECHHHHHHHHHHHTCEEEECTTSCEEEEEC-TT--------CCCEEEEEET
T ss_pred EEEECCEecCCC----cCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccCCCcEEEEE-CC--------CCCcEEEEEC
Confidence 999999987643 5899999999999999999999999987653112222356676 97 4799999997
Q ss_pred cCcEEEEccCCeEEEEe---cCCCceEEE-EEeCCCCCCceEEchhhhcceEEEEECCCCEEEEecCCCCC
Q 011482 417 GNAEMTVDVTGIVYFVK---SDASQVCLA-LASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGEDCSS 483 (484)
Q Consensus 417 gg~~~~l~~~~~~~~~~---~~~~~~Cl~-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~C~~ 483 (484)
||++++|++++|+++.. .+....|++ +... +.||||+.|||++|+|||++++|||||+++|++
T Consensus 268 ~g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 2qzx_A 268 NNLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES----EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTS 334 (342)
T ss_dssp TTEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC----SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred CCcEEEEcHHHhcccccccCCCCCCccEEEEecC----CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCC
Confidence 78999999999998642 122467985 5543 359999999999999999999999999999975
No 12
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=3.9e-54 Score=440.99 Aligned_cols=328 Identities=21% Similarity=0.415 Sum_probs=254.9
Q ss_pred ccccccCccccceeEEEEEEEcCEEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCcccccccccC
Q 011482 121 EIPLTSGIRLQTLNYIATIELGGRNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFAT 200 (484)
Q Consensus 121 ~~pl~~~~~~~~~~Y~~~v~iGtq~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~~~~~ 200 (484)
.+||... ..+.+|+++|.|||. |+|||||+++||+|.+|. +|+.++|.++.|......
T Consensus 4 ~~pv~~~--~~~~~Y~~~i~iGtP---v~~DTGSs~lWv~c~~~~----------------~~~~~~C~s~~C~~~~~~- 61 (381)
T 1t6e_X 4 LAPVTKD--PATSLYTIPFHDGAS---LVLDVAGPLVWSTCDGGQ----------------PPAEIPCSSPTCLLANAY- 61 (381)
T ss_dssp EEEEEEC--TTTCCEEEEEETTEE---EEEETTCCCEEECCCTTC----------------CCCCCBTTSHHHHHHHSS-
T ss_pred EEeEEec--CCCcEEEEEEeCCCE---EEEECCCCceEEeCCCCC----------------CCCccCCCCchhccccCC-
Confidence 4566632 235679999999996 999999999999998651 367889999999864322
Q ss_pred CCCCCCCCC------CCCCC-eeeEEcCCCceEeEEEEEEEEEecc----ccccce----EEEEEecc--CCCCCCcCee
Q 011482 201 GNSGVCSSS------SPPDC-NYFVSYGDGSYTRGELGREHLGLGK----ASVNDF----IFGCGRNN--KGLFGGVSGL 263 (484)
Q Consensus 201 ~~~~~C~~~------~~~~C-~~~~~Ygdgs~~~G~~~~Dtltlg~----~~~~~~----~fG~~~~~--~~~~~~~~GI 263 (484)
+...|... .+..| .|.+.|+||+.+.|.+++|+|++++ ..++++ .|||++.. .+.+..++||
T Consensus 62 -~~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGI 140 (381)
T 1t6e_X 62 -PAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGV 140 (381)
T ss_dssp -CCTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTTEEEE
T ss_pred -CCCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCCCCCCceE
Confidence 23356532 13568 5999999999889999999999984 456665 67999886 4445688999
Q ss_pred eecCCCCCccccchhhc--cCCeeEEeeCCCCCCCCcceEEecCCCc---cccCCCCeEEeeCcCCCCCCceEEEEEeEE
Q 011482 264 MGLGRSDLSLVSQTSEI--FGGLFSYCLPSTQDAGASGSLILGGNSS---VFKNSTPITYTNMIPNPQLATFYILNLTGI 338 (484)
Q Consensus 264 lGLg~~~~Sl~~ql~~~--~~~~FS~~L~~~~~~~~~G~L~fGg~~~---~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i 338 (484)
||||++++|+++|+... ..++||+||++. ..|.|+||+.+. +|. +++.|+|++.++..+ +|+|+|++|
T Consensus 141 lGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~----~~G~l~fGg~~~~~~~~~--g~l~~tPl~~~~~~~-~y~v~l~~i 213 (381)
T 1t6e_X 141 AGLANSGLALPAQVASAQKVANRFLLCLPTG----GPGVAIFGGGPVPWPQFT--QSMPYTPLVTKGGSP-AHYISARSI 213 (381)
T ss_dssp EECSSSTTSHHHHHHHHHTCCSEEEEECCSS----SCEEEEESCCSCSCHHHH--TTCCEEECBCCTTCC-SCEECEEEE
T ss_pred EEeCCCcchhHHHHhhhcccCceEEEEeCCC----CCeeEEeCCccccccccc--CcceeeccccCCCCc-ceEEEEEEE
Confidence 99999999999998763 468999999863 579999999543 243 899999999864433 566999999
Q ss_pred EEcCEEee--cCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhc-------CCCCC-CCCcccccccccCCCc----
Q 011482 339 SIGGKQLQ--ASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFS-------GFPSA-PGFSILDTCFNLSAYQ---- 404 (484)
Q Consensus 339 ~vg~~~i~--~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~-------~~~~~-~~~~~~~~C~~~~~~~---- 404 (484)
+||++.+. ...|..+++||||||++++||+++|++|+++|.+++. .++.. .....++.|++.+...
T Consensus 214 ~vg~~~~~~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~ 293 (381)
T 1t6e_X 214 VVGDTRVPVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLG 293 (381)
T ss_dssp EETTEECCCCTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETT
T ss_pred EEcCEEecCCHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCccccc
Confidence 99998864 3344346899999999999999999999999998774 23321 1222335699765321
Q ss_pred ccccceEEEEEecCcEEEEccCCeEEEEecCCCceEEEEEeCCC------CCCceEEchhhhcceEEEEECCCCEEEEec
Q 011482 405 EVNIPLVKMEFEGNAEMTVDVTGIVYFVKSDASQVCLALASLSY------EDETGIIGNYQQKNQRVIYDTKNSQLGFAG 478 (484)
Q Consensus 405 ~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~~~~~~Cl~~~~~~~------~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~ 478 (484)
...+|+|+|+|+||++++|++++|+++.. ++..|++|+..+. ..+.||||+.|||++|+|||++++|||||+
T Consensus 294 ~~~~P~i~f~f~gg~~~~l~~~~y~~~~~--~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~ 371 (381)
T 1t6e_X 294 GYAVPNVQLGLDGGSDWTMTGKNSMVDVK--QGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSR 371 (381)
T ss_dssp EECCCCEEEEETTSCEEEECHHHHEEEEE--TTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred CCcCCeEEEEECCCcEEEeCCCeEEEEcC--CCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEec
Confidence 13689999999767999999999998763 4678999887643 125799999999999999999999999998
Q ss_pred CC
Q 011482 479 ED 480 (484)
Q Consensus 479 ~~ 480 (484)
+.
T Consensus 372 ~~ 373 (381)
T 1t6e_X 372 LP 373 (381)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 13
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=2.3e-54 Score=435.06 Aligned_cols=300 Identities=21% Similarity=0.379 Sum_probs=250.0
Q ss_pred cccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecC--CCCCC-------CCCCCCCCCCCCCCCcceecC
Q 011482 120 TEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQ--PCKSC-------YNQQDPVFDPSISPSYKKVLC 188 (484)
Q Consensus 120 ~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~--~C~~C-------~~~~~~~ydps~Sst~~~v~C 188 (484)
..+||.+. +.+|+++|.||| |++.|+|||||+++||+|. +|..| .++.++.|||++|+||+..
T Consensus 3 ~~~~l~~~----~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~-- 76 (334)
T 1j71_A 3 VPTTLINE----GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNL-- 76 (334)
T ss_dssp EEEEEEEC----SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEE--
T ss_pred eeEEEecC----CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccC--
Confidence 56777765 346999999999 9999999999999999976 78643 1234679999999999953
Q ss_pred CCcccccccccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCCCCCCcCeeeecCC
Q 011482 189 NSSTCHALEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGLFGGVSGLMGLGR 268 (484)
Q Consensus 189 ~s~~C~~~~~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~~~~~~~GIlGLg~ 268 (484)
.|.|.+.|+||+.+.|.+++|+|++++..++++.|||++... ..+||||||+
T Consensus 77 ------------------------~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~----~~~GilGLg~ 128 (334)
T 1j71_A 77 ------------------------NQDFSIEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTS----VDQGIMGIGF 128 (334)
T ss_dssp ------------------------EEEEEEEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES----SSSCEEECSC
T ss_pred ------------------------CCceEEEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEecC----CCccEEEEcC
Confidence 269999999999889999999999999999999999999864 5789999999
Q ss_pred CCC--------ccccchhhc---cCCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEe
Q 011482 269 SDL--------SLVSQTSEI---FGGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLT 336 (484)
Q Consensus 269 ~~~--------Sl~~ql~~~---~~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~ 336 (484)
..+ +++.|+... ..++||+||.+. ....|.|+||| +..+|. +++.|+|+... .+|.|.++
T Consensus 129 ~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~--~~~~G~l~fGg~d~~~~~--g~l~~~p~~~~----~~~~v~l~ 200 (334)
T 1j71_A 129 TADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSE--DASTGKIIFGGVDNAKYT--GTLTALPVTSS----VELRVHLG 200 (334)
T ss_dssp GGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCT--TCSEEEEEETEEETTSEE--EEEEEEECCCS----SSCEEEEE
T ss_pred CcccCccccCCcHHHHHHHCCCCCccEEEEEeCCC--CCCCeEEEEeeechHHcc--CceEEEEccCC----CeEEEEEe
Confidence 865 455566543 257899999864 34689999999 667775 89999999875 58999999
Q ss_pred EEEEcCEEeecCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcc-cccccccCCCcccccceEEEEE
Q 011482 337 GISIGGKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSI-LDTCFNLSAYQEVNIPLVKMEF 415 (484)
Q Consensus 337 ~i~vg~~~i~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~C~~~~~~~~~~~P~i~~~f 415 (484)
+|+|+++.+... ..+||||||++++||+++|++|.+++.+.+. ...+.+. ++ |+ .+|.|+|+|
T Consensus 201 ~i~v~g~~~~~~----~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~~~~~~~~-C~--------~~p~i~f~f 264 (334)
T 1j71_A 201 SINFDGTSVSTN----ADVVLDSGTTITYFSQSTADKFARIVGATWD---SRNEIYRLPS-CD--------LSGDAVFNF 264 (334)
T ss_dssp EEEETTEEEEEE----EEEEECTTCSSEEECHHHHHHHHHHHTCEEE---TTTTEEECSS-SC--------CCSEEEEEE
T ss_pred EEEECCEeccCC----ccEEEeCCCCcEecCHHHHHHHHHHcCCccc---CCCceEEEEc-CC--------CCCceEEEE
Confidence 999999987643 5899999999999999999999999987652 2233555 55 97 479999999
Q ss_pred ecCcEEEEccCCeEEEEecCCCceEEE-EEeCCCCCCceEEchhhhcceEEEEECCCCEEEEecCCCCC
Q 011482 416 EGNAEMTVDVTGIVYFVKSDASQVCLA-LASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGEDCSS 483 (484)
Q Consensus 416 ~gg~~~~l~~~~~~~~~~~~~~~~Cl~-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~C~~ 483 (484)
.||++++|++++|+++. .++..|++ +... +.||||+.|||++|+|||.+++|||||+++|++
T Consensus 265 ~~g~~~~i~~~~y~~~~--~~~~~C~~~i~~~----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 327 (334)
T 1j71_A 265 DQGVKITVPLSELILKD--SDSSICYFGISRN----DANILGDNFLRRAYIVYDLDDKTISLAQVKYTS 327 (334)
T ss_dssp STTCEEEEEGGGGEEEC--SSSSCEEESEEEC----TTCEECHHHHTTEEEEEETTTTEEEEEEECCCS
T ss_pred cCCcEEEECHHHheeec--CCCCeeEEEEeEC----CCcEEChHhhccEEEEEECCCCEEEEEecCCCC
Confidence 77899999999999874 23345984 5543 359999999999999999999999999999975
No 14
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=2.5e-54 Score=441.01 Aligned_cols=304 Identities=23% Similarity=0.414 Sum_probs=251.3
Q ss_pred cccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCccccccc
Q 011482 120 TEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALE 197 (484)
Q Consensus 120 ~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~~ 197 (484)
..+||.+. .+++|+++|.||| |++.|+|||||+++||+|.+|..+.++.++.|||++|+||+..
T Consensus 52 ~~~pl~~~---~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~----------- 117 (375)
T 1miq_A 52 DVIELDDV---ANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKD----------- 117 (375)
T ss_dssp BCCCGGGT---BCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGSCCBCGGGCTTCEEE-----------
T ss_pred ceEEcccC---CCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCCCcCCCccCCceEEC-----------
Confidence 45788764 3467999999999 9999999999999999999996333334679999999999953
Q ss_pred ccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEec----cCCCC--CCcCeeeecCCCCC
Q 011482 198 FATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRN----NKGLF--GGVSGLMGLGRSDL 271 (484)
Q Consensus 198 ~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~----~~~~~--~~~~GIlGLg~~~~ 271 (484)
.|.|.+.|++|+. .|.+++|+|++++..+++ .|||++. .. .| ...+||||||+..+
T Consensus 118 ---------------~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~ 179 (375)
T 1miq_A 118 ---------------GTKVDITYGSGTV-KGFFSKDLVTLGHLSMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDL 179 (375)
T ss_dssp ---------------EEEEEEEETTEEE-EEEEEEEEEEETTEEEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCT
T ss_pred ---------------CcEEEEEeCCCeE-EEEEEEEEEEEcCceECc-EEEEEEecccccc-ccccCCCceEEeCCCCcc
Confidence 2699999999994 999999999999999999 9999998 54 33 46899999999987
Q ss_pred ccc------cchhhc---cCCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEc
Q 011482 272 SLV------SQTSEI---FGGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIG 341 (484)
Q Consensus 272 Sl~------~ql~~~---~~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg 341 (484)
+.. .++... ..++||+||.+. + ...|.|+||| +.++|. +++.|+|+... .+|.|.++ |+|+
T Consensus 180 s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~-~-~~~G~l~fGg~d~~~~~--g~l~~~p~~~~----~~w~v~l~-i~v~ 250 (375)
T 1miq_A 180 SIGSIDPIVVELKNQNKIDNALFTFYLPVH-D-VHAGYLTIGGIEEKFYE--GNITYEKLNHD----LYWQIDLD-VHFG 250 (375)
T ss_dssp TCSSCCCHHHHHHHTTSSSSSEEEEECCTT-C-TTEEEEEESSCCGGGEE--EEEEEEEBSSS----SSSEEEEE-EEET
T ss_pred cccCCCCHHHHHHhccCcCCCEEEEEecCC-C-CCCeEEEEcccCHHHcC--CceEEEecCCC----ceEEEEEE-EEEC
Confidence 643 233322 258999999975 2 3689999999 556665 89999999864 79999999 9999
Q ss_pred CEEeecCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEecCcEE
Q 011482 342 GKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEM 421 (484)
Q Consensus 342 ~~~i~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~ 421 (484)
++.+ . ...+||||||++++||+++|++|.+++.+. ++...+.+.++ |+. . .+|+|+|+| ||+++
T Consensus 251 g~~~--~---~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~---~~~~~g~~~~~-C~~-~-----~~P~i~f~f-~g~~~ 314 (375)
T 1miq_A 251 KQTM--E---KANVIVDSGTTTITAPSEFLNKFFANLNVI---KVPFLPFYVTT-CDN-K-----EMPTLEFKS-ANNTY 314 (375)
T ss_dssp TEEE--E---EEEEEECTTBSSEEECHHHHHHHHHHHTCE---ECTTSSCEEEE-TTC-T-----TCCCEEEEC-SSCEE
T ss_pred CEEc--c---cceEEecCCCccEEcCHHHHHHHHHHhCCc---ccCCCCeEEEE-CCC-C-----CCCcEEEEE-CCEEE
Confidence 9887 2 368999999999999999999999998754 23345566676 996 3 789999999 67999
Q ss_pred EEccCCeEEEEecCCCceEE-EEEeCCCCCCceEEchhhhcceEEEEECCCCEEEEecCC
Q 011482 422 TVDVTGIVYFVKSDASQVCL-ALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGED 480 (484)
Q Consensus 422 ~l~~~~~~~~~~~~~~~~Cl-~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~ 480 (484)
+|++++|+++....+...|+ +|.+.+...+.||||++|||++|+|||.+++|||||+++
T Consensus 315 ~l~~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 315 TLEPEYYMNPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp EECGGGSEEESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EECHHHhEeeccCCCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 99999999875322346898 788765323689999999999999999999999999864
No 15
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.2e-54 Score=435.21 Aligned_cols=302 Identities=22% Similarity=0.382 Sum_probs=249.7
Q ss_pred cccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCC--CCCCCCCCCCCCCCCCCCcceecCCCccccc
Q 011482 120 TEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPC--KSCYNQQDPVFDPSISPSYKKVLCNSSTCHA 195 (484)
Q Consensus 120 ~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C--~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~ 195 (484)
..+||.+.. +++|+++|.||| |++.|+|||||+++||+|.+| ..|.. ++.|||++|+||+..
T Consensus 4 ~~~~l~n~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~--~~~y~~~~SsT~~~~--------- 69 (323)
T 3cms_A 4 ASVPLTNYL---DSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKN--HQRFDPRKSSTFQNL--------- 69 (323)
T ss_dssp EEEEEEEET---TTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT--SCCBCGGGCTTCEEE---------
T ss_pred ceeeeEecc---CCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccC--CCCCCCccCCCeEEC---------
Confidence 456787754 356999999999 999999999999999999999 56754 579999999999953
Q ss_pred ccccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCC-CC--CCcCeeeecCCCCCc
Q 011482 196 LEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKG-LF--GGVSGLMGLGRSDLS 272 (484)
Q Consensus 196 ~~~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~-~~--~~~~GIlGLg~~~~S 272 (484)
.|.|.+.|++|+. .|.+++|+|++++.+++++.|||++...+ .| ...+||||||+..++
T Consensus 70 -----------------~~~~~i~Yg~Gs~-~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s 131 (323)
T 3cms_A 70 -----------------GKPLSIHYGTGSM-QGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLA 131 (323)
T ss_dssp -----------------EEEEEEEETTEEE-EEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGS
T ss_pred -----------------CcEEEEEeCCCCe-EEEEEEEEEEECCeEEeccEEEEEEecccccccccCCceEEecCcchhh
Confidence 2699999999984 89999999999999999999999998866 33 478999999998765
Q ss_pred c------ccchhhc---cCCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcC
Q 011482 273 L------VSQTSEI---FGGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGG 342 (484)
Q Consensus 273 l------~~ql~~~---~~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~ 342 (484)
. +.++... ..++||+||.+. . ..|.|+||| +.++|. +++.|+|+... .+|.|.+++|+|++
T Consensus 132 ~~~~~~~~~~l~~q~~i~~~~FS~~l~~~-~--~~G~l~fGg~d~~~~~--g~l~~~p~~~~----~~~~v~l~~i~v~~ 202 (323)
T 3cms_A 132 SEYSIPVFDNMMNRHLVAQDLFSVYMDRN-G--QESMLTLGAIDPSYYT--GSLHWVPVTVQ----QYWQFTVDSVTISG 202 (323)
T ss_dssp CTTCCCHHHHHHHTTCSSSSEEEEECCTT-S--SCEEEEESCCCGGGEE--EEEEEEECSSB----TTBEEEEEEEEETT
T ss_pred ccCCCCHHHHHHHCCCCCCCEEEEEECCC-C--CCEEEEECCCChhhcc--CceEEEECccC----CeEEEEEeeEEECC
Confidence 3 2333332 258999999875 2 239999999 656665 89999999864 79999999999999
Q ss_pred EEeecCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEecCcEEE
Q 011482 343 KQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMT 422 (484)
Q Consensus 343 ~~i~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~ 422 (484)
+.+... ....+||||||++++||++++++|.+++.+.. ...+.+.++ |++.. .+|+|+|+| +|++++
T Consensus 203 ~~~~~~--~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~----~~~g~~~~~-C~~~~-----~~P~i~f~f-~g~~~~ 269 (323)
T 3cms_A 203 VVVACE--GGCQAILDTGTSKLVGPSSDILNIQQAIGATQ----NQYGEFDID-CDNLS-----YMPTVVFEI-NGKMYP 269 (323)
T ss_dssp EEEEST--TCEEEEECTTCCSEEECHHHHHHHHHHHTCEE----ETTTEEEEC-TTCTT-----TSCCEEEEE-TTEEEE
T ss_pred EEeecC--CCcEEEEecCCccEeCCHHHHHHHHHHhCCee----cCCCcEEEE-CCCCc-----cCceEEEEE-CCEEEE
Confidence 887532 13689999999999999999999999886532 223556666 99766 789999999 789999
Q ss_pred EccCCeEEEEecCCCceEE-EEEeCCCCCCceEEchhhhcceEEEEECCCCEEEEecCC
Q 011482 423 VDVTGIVYFVKSDASQVCL-ALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGED 480 (484)
Q Consensus 423 l~~~~~~~~~~~~~~~~Cl-~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~ 480 (484)
|++++|+++ .+..|+ +|...+ ..+.||||++|||++|+|||.+++|||||+++
T Consensus 270 i~~~~y~~~----~~~~C~~~i~~~~-~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 270 LTPSAYTSQ----DQGFCTSGFQSEN-HSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp ECHHHHEEE----ETTEEEESEEEC----CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ECHHHhccC----CCCEEEEEEEeCC-CCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 999999987 346899 587754 24689999999999999999999999999874
No 16
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2e-54 Score=433.77 Aligned_cols=301 Identities=22% Similarity=0.426 Sum_probs=251.5
Q ss_pred ccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCC--CCCCCCCCCCCCCCCCCcceecCCCcccccc
Q 011482 121 EIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCK--SCYNQQDPVFDPSISPSYKKVLCNSSTCHAL 196 (484)
Q Consensus 121 ~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~--~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~ 196 (484)
.+||.+.. +++|+++|.||| |++.|+|||||+++||+|.+|. .|.. ++.|||++|+||+..
T Consensus 3 ~~~l~n~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~--~~~y~~~~SsT~~~~---------- 67 (324)
T 1am5_A 3 TEQMKNEA---DTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSN--HNKFKPRQSSTYVET---------- 67 (324)
T ss_dssp EEEEEEET---TTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHT--SCCBCGGGCTTCEEE----------
T ss_pred eeeeecCC---CCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccC--CCcCCCccCCCeEeC----------
Confidence 46777643 456999999999 9999999999999999999997 4654 579999999999953
Q ss_pred cccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCC-CC--CCcCeeeecCCCCCcc
Q 011482 197 EFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKG-LF--GGVSGLMGLGRSDLSL 273 (484)
Q Consensus 197 ~~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~-~~--~~~~GIlGLg~~~~Sl 273 (484)
.|.|.+.|++|+. .|.+++|+|++++..++++.|||++...+ .+ ...+||||||+..++.
T Consensus 68 ----------------~~~~~i~Yg~Gs~-~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~ 130 (324)
T 1am5_A 68 ----------------GKTVDLTYGTGGM-RGILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAA 130 (324)
T ss_dssp ----------------EEEEEEECSSCEE-EEEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCG
T ss_pred ----------------CcEEEEEECCCCe-EEEEEECceeECCcEEcccEEEEEEecccccccCCCCceEEecCCccccc
Confidence 2699999999988 99999999999999999999999998866 33 3689999999988764
Q ss_pred c------cchhhc---cCCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcCE
Q 011482 274 V------SQTSEI---FGGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGK 343 (484)
Q Consensus 274 ~------~ql~~~---~~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~ 343 (484)
. .++... ..++||+||.+. ....|.|+||+ +.++|. +++.|+|+... .+|.|.+++|+|+++
T Consensus 131 ~~~~~~~~~l~~qg~i~~~~FS~~l~~~--~~~~G~l~fGg~d~~~~~--g~l~~~p~~~~----~~~~v~l~~i~v~~~ 202 (324)
T 1am5_A 131 AGAVPVFDNMGSQSLVEKDLFSFYLSGG--GANGSEVMLGGVDNSHYT--GSIHWIPVTAE----KYWQVALDGITVNGQ 202 (324)
T ss_dssp GGCCCHHHHHHHTTCSSSSEEEEECCST--TCSCEEEEESSCCGGGBC--SCCEEEEEEEE----TTEEEEECEEEETTE
T ss_pred cCCCchHHhHHhcCCCCCCEEEEEecCC--CCCCcEEEECccCHHHcC--CceEEEecCCC----cEEEEEEeEEEECCc
Confidence 3 333332 257899999875 24589999999 656664 89999999864 799999999999998
Q ss_pred EeecCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEecCcEEEE
Q 011482 344 QLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTV 423 (484)
Q Consensus 344 ~i~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l 423 (484)
.+..+ ...+||||||++++||+++|++|.+++.+. ...+.+.++ |++.. .+|+|+|+| +|++++|
T Consensus 203 ~~~~~---~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-----~~~g~~~~~-C~~~~-----~~P~i~f~f-~g~~~~i 267 (324)
T 1am5_A 203 TAACE---GCQAIVDTGTSKIVAPVSALANIMKDIGAS-----ENQGEMMGN-CASVQ-----SLPDITFTI-NGVKQPL 267 (324)
T ss_dssp ECCCC---CEEEEECTTCSSEEECTTTHHHHHHHHTCE-----ECCCCEECC-TTSSS-----SSCCEEEEE-TTEEEEE
T ss_pred eeecc---CceEEEecCCccEECCHHHHHHHHHHhCCc-----ccCCcEEEe-CCCcc-----cCCcEEEEE-CCEEEEE
Confidence 85433 268999999999999999999999998764 124456665 99765 799999999 7899999
Q ss_pred ccCCeEEEEecCCCceEE-EEEeCCC---CCCceEEchhhhcceEEEEECCCCEEEEecCC
Q 011482 424 DVTGIVYFVKSDASQVCL-ALASLSY---EDETGIIGNYQQKNQRVIYDTKNSQLGFAGED 480 (484)
Q Consensus 424 ~~~~~~~~~~~~~~~~Cl-~~~~~~~---~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~ 480 (484)
++++|+++. +..|+ +|...+. ..+.||||+.|||++|+|||.+++|||||+++
T Consensus 268 ~~~~y~~~~----~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 268 PPSAYIEGD----QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp CHHHHEEES----SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred CHHHhcccC----CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 999999763 56898 6876531 24689999999999999999999999999974
No 17
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.9e-54 Score=440.39 Aligned_cols=314 Identities=21% Similarity=0.350 Sum_probs=257.8
Q ss_pred ccccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCC---CCCCCCCCCCCCCCCCCcceecCCCccc
Q 011482 119 NTEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCK---SCYNQQDPVFDPSISPSYKKVLCNSSTC 193 (484)
Q Consensus 119 ~~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~---~C~~~~~~~ydps~Sst~~~v~C~s~~C 193 (484)
...+||.+.. +++|+++|.||| |++.|+|||||+++||+|.+|. .|.. ++.|||++|+||+..
T Consensus 7 ~~~~~l~~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~--~~~y~~~~SsT~~~~------- 74 (361)
T 1mpp_A 7 VDTPGLYDFD---LEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVG--KRFFDPSSSSTFKET------- 74 (361)
T ss_dssp EEEEEEEETT---TTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCS--SCCBCGGGCTTCEEE-------
T ss_pred cceEEeecCC---CCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCC--CCcCCCccCCceEec-------
Confidence 3557887643 356999999999 9999999999999999999998 7865 679999999999953
Q ss_pred ccccccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCC------CC--CCcCeeee
Q 011482 194 HALEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKG------LF--GGVSGLMG 265 (484)
Q Consensus 194 ~~~~~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~------~~--~~~~GIlG 265 (484)
.|.|.+.|++|+ +.|.+++|+|+|++..++++.|||++...+ .+ ...+||||
T Consensus 75 -------------------~~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilG 134 (361)
T 1mpp_A 75 -------------------DYNLNITYGTGG-ANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFG 134 (361)
T ss_dssp -------------------EEEEEEECSSCE-EEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEE
T ss_pred -------------------CCeEEEEECCce-EEEEEEEEEEEECCEEEeceEEEEEEeccCccccccccccCCCCCEEE
Confidence 269999999999 599999999999999999999999998765 23 36899999
Q ss_pred cCCCCCcccc------------chhhc---cCCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCc
Q 011482 266 LGRSDLSLVS------------QTSEI---FGGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLAT 329 (484)
Q Consensus 266 Lg~~~~Sl~~------------ql~~~---~~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~ 329 (484)
||+..++... |+... ..++||+||.+. ...|.|+||| +.++|. +++.|+|+......+.
T Consensus 135 Lg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~---~~~G~l~fGg~d~~~~~--g~l~~~p~~~~~~~~~ 209 (361)
T 1mpp_A 135 AAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN---DGGGQVVFGGVNNTLLG--GDIQYTDVLKSRGGYF 209 (361)
T ss_dssp CSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS---SSEEEEEESSCCGGGBS--SCCEEEECEEETTEEE
T ss_pred eCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCC---CCCcEEEEecCChhhcC--CceEEEEcccCCCcee
Confidence 9998766432 34332 258999999963 4589999999 556664 8999999987642223
Q ss_pred eEEEEEeEEEEcCEEeecCCCCCCcEE-EcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCccccc
Q 011482 330 FYILNLTGISIGGKQLQASGFAKGGIL-IDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNI 408 (484)
Q Consensus 330 ~y~v~l~~i~vg~~~i~~~~~~~~~~i-iDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 408 (484)
+|.|.|++|+|+++.+... ....+| |||||++++||+++|++|++++.+. ++...+.+.++ |+... .+
T Consensus 210 ~~~v~l~~i~v~~~~~~~~--~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~---~~~~~g~~~~~-C~~~~-----~~ 278 (361)
T 1mpp_A 210 FWDAPVTGVKIDGSDAVSF--DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPD---ATESQQGYTVP-CSKYQ-----DS 278 (361)
T ss_dssp EEEEEEEEEEETTEEEEEE--EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTT---CEEETTEEEEE-HHHHT-----TC
T ss_pred EEEEEEeEEEECCeeeccC--CCCEEEEECCCCCceeCCHHHHHHHHHHhCCc---ccCCCCcEEEE-CCCcc-----cC
Confidence 9999999999999886421 135889 9999999999999999999998764 22334556665 99765 67
Q ss_pred -ceEEEEEe-c-----CcEEEEccCCeEEEEecCCCceEE-EEEeCCCCCCceEEchhhhcceEEEEECCCCEEEEecCC
Q 011482 409 -PLVKMEFE-G-----NAEMTVDVTGIVYFVKSDASQVCL-ALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGED 480 (484)
Q Consensus 409 -P~i~~~f~-g-----g~~~~l~~~~~~~~~~~~~~~~Cl-~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~ 480 (484)
|+|+|+|. | |++++|++++|+++.. .++..|+ +|.+.. .+.||||++|||++|+|||++++|||||+++
T Consensus 279 ~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~-~~~~~C~~~i~~~~--~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 355 (361)
T 1mpp_A 279 KTTFSLVLQKSGSSSDTIDVSVPISKMLLPVD-KSGETCMFIVLPDG--GNQFIVGNLFLRFFVNVYDFGKNRIGFAPLA 355 (361)
T ss_dssp CCEEEEEEECTTCSSCEEEEEEEGGGGEEECS-SSSCEEEESEEEES--SSCCEEEHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCcEEEEEEcCCcCCCCeEEEECHHHhEEecC-CCCCeeEEEEEeCC--CCCEEEChHHhccEEEEEECCCCEEEEEEcc
Confidence 99999994 4 7999999999998753 2356898 787752 3689999999999999999999999999999
Q ss_pred CCC
Q 011482 481 CSS 483 (484)
Q Consensus 481 C~~ 483 (484)
|+.
T Consensus 356 ~~~ 358 (361)
T 1mpp_A 356 SGY 358 (361)
T ss_dssp TTT
T ss_pred cCC
Confidence 974
No 18
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.7e-54 Score=435.34 Aligned_cols=305 Identities=15% Similarity=0.222 Sum_probs=252.6
Q ss_pred cccccccCccccceeEEEEEEEcCEEEEEEEEcCCCceeEecCCCC--CCCCCCCCCCCCCCCCCcceecCCCccccccc
Q 011482 120 TEIPLTSGIRLQTLNYIATIELGGRNMTVIVDTGSDLTWVQCQPCK--SCYNQQDPVFDPSISPSYKKVLCNSSTCHALE 197 (484)
Q Consensus 120 ~~~pl~~~~~~~~~~Y~~~v~iGtq~~~vivDTGS~~~Wv~~~~C~--~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~~ 197 (484)
..+||.+..+ .+|+++|.||.|++.|+|||||+++||+|.+|. .|..+.++.|||++| ||+..
T Consensus 7 ~~~~l~n~~~---~~Y~~~i~iG~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~----------- 71 (330)
T 1yg9_A 7 LYKLVHVFIN---TQYAGITKIGNQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISD----------- 71 (330)
T ss_dssp SCSCEEEEEC---TTSEEEEEETTEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEE-----------
T ss_pred eEeeeecCCC---CEEEEEEEECCEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEEC-----------
Confidence 5567776543 469999999999999999999999999999996 685556789999999 99842
Q ss_pred ccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCCCC--CCcCeeeecCCCCCc---
Q 011482 198 FATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGLF--GGVSGLMGLGRSDLS--- 272 (484)
Q Consensus 198 ~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~~~--~~~~GIlGLg~~~~S--- 272 (484)
.|.|.+.|++|+. .|.+++|+|++++.+++++.|||++.....| ...+||||||+..++
T Consensus 72 ---------------~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~ 135 (330)
T 1yg9_A 72 ---------------GNVQVKFFDTGSA-VGRGIEDSLTISQLTTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNAL 135 (330)
T ss_dssp ---------------EEEEEEETTTEEE-EEEEEEEEEEETTEEEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTT
T ss_pred ---------------CCEEEEEECCceE-EEEEEEEEEEECCEEEcCeEEEEEEEcccccccccCceEEEcCcchhcccc
Confidence 2489999999998 9999999999999999999999999883333 368999999999877
Q ss_pred ----cccchhhc--cCCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcCEEe
Q 011482 273 ----LVSQTSEI--FGGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQL 345 (484)
Q Consensus 273 ----l~~ql~~~--~~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~i 345 (484)
++.|+... ..++||+||.+..+....|.|+||| +.++|. +++.|+|+... .+|.|.+++|+|+++.+
T Consensus 136 ~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~--g~l~~~p~~~~----~~w~v~l~~i~v~~~~~ 209 (330)
T 1yg9_A 136 KGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVD--GEFTYVPLVGD----DSWKFRLDGVKIGDTTV 209 (330)
T ss_dssp SCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEE--EEEEEEEBSCT----TSCCEECSEEEETTEEE
T ss_pred CCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHcc--CceEEEECCCC----CEEEEEeCeEEECCEEE
Confidence 34444332 2689999998652222389999999 666665 89999999853 79999999999999887
Q ss_pred ecCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCC--Cc-ccccccccCCCcccccceEEEEEecCcEEE
Q 011482 346 QASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPG--FS-ILDTCFNLSAYQEVNIPLVKMEFEGNAEMT 422 (484)
Q Consensus 346 ~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~--~~-~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~ 422 (484)
... ...+||||||++++||++++++|.+++.+... ..+ .+ .++ |+... .+|+|+|+| ||++++
T Consensus 210 ~~~---~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~----~~g~~~~~~~~-C~~~~-----~~p~i~f~f-gg~~~~ 275 (330)
T 1yg9_A 210 APA---GTQAIIDTSKAIIVGPKAYVNPINEAIGCVVE----KTTTRRICKLD-CSKIP-----SLPDVTFVI-NGRNFN 275 (330)
T ss_dssp ECT---TCEEEECTTCSSEEEEHHHHHHHHHHHTCEEE----ECSSCEEEEEC-GGGGG-----GSCCEEEEE-TTEEEE
T ss_pred cCC---CcEEEEecCCccccCCHHHHHHHHHHhCCccc----CCCceEEEEEE-CCCcc-----ccCcEEEEE-CCEEEE
Confidence 532 46899999999999999999999999865421 233 56 676 98755 789999999 789999
Q ss_pred EccCCeEEEEecCCCceEE-EEEeCCCCCCceEEchhhhcceEEEEECCCCEEEEecCC
Q 011482 423 VDVTGIVYFVKSDASQVCL-ALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGED 480 (484)
Q Consensus 423 l~~~~~~~~~~~~~~~~Cl-~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~ 480 (484)
|++++|+++. +..|+ +|.+.+ ..+.||||++|||++|+|||.+++|||||+++
T Consensus 276 l~~~~y~~~~----~~~C~~~i~~~~-~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 276 ISSQYYIQQN----GNLCYSGFQPCG-HSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp ECHHHHEEEE----TTEEEESEEEET-TCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ECHHHhcccC----CCcEEEEEEeCC-CCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 9999999875 46898 677653 24689999999999999999999999999864
No 19
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=2.8e-54 Score=432.42 Aligned_cols=295 Identities=24% Similarity=0.338 Sum_probs=246.1
Q ss_pred ceeEEEEEEEcCEEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCcccccccccCCCCCCCCCCCC
Q 011482 132 TLNYIATIELGGRNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFATGNSGVCSSSSP 211 (484)
Q Consensus 132 ~~~Y~~~v~iGtq~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~~~~~~~~~~C~~~~~ 211 (484)
+.+|+++|.||.|++.|+|||||+++||+|.+|..|.++.++.|||++|+ ++.
T Consensus 14 ~~~Y~~~i~iG~q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~-------------------------- 66 (323)
T 1izd_A 14 DEEYITQVTVGDDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSA-QKI-------------------------- 66 (323)
T ss_dssp GCCEEEEEEETTEEEEEEEETTCCCEEECBTTSCHHHHTTCCCBCCCTTC-EEE--------------------------
T ss_pred CCEEEEEEEECCEEEEEEEcCCCcceEEecCCCCcccccCCCCCCccccC-Ccc--------------------------
Confidence 45799999999999999999999999999999998877778999999998 552
Q ss_pred CCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCCCC---CCcCeeeecCCCCCccc---------cchhh
Q 011482 212 PDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGLF---GGVSGLMGLGRSDLSLV---------SQTSE 279 (484)
Q Consensus 212 ~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~~~---~~~~GIlGLg~~~~Sl~---------~ql~~ 279 (484)
..|.|.+.|+||+.+.|.+++|+|++++.+++++.|||++...+.+ ...+||||||+..++.+ +++..
T Consensus 67 ~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~ 146 (323)
T 1izd_A 67 DGATWSISYGDGSSASGDVYKDKVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKS 146 (323)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGG
T ss_pred CCCeEEEEcCCCCeEEEEEEEEEEEECCEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHH
Confidence 2369999999999779999999999999999999999999876633 46899999999876642 33332
Q ss_pred c-cCCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcCEEeecCCCCCCcEEE
Q 011482 280 I-FGGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQASGFAKGGILI 357 (484)
Q Consensus 280 ~-~~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~i~~~~~~~~~~ii 357 (484)
. ..++||+||.+. ..|.|+||| +..+|. +++.|+|+... +.+|.|.+++|+|++ .+... ...+||
T Consensus 147 ~i~~~~FS~~L~~~----~~G~l~fGg~d~~~~~--g~l~~~p~~~~---~~~w~v~l~~i~v~~-~~~~~---~~~aii 213 (323)
T 1izd_A 147 SLSEPIFAVALKHN----APGVYDFGYTDSSKYT--GSITYTDVDNS---QGFWGFTADGYSIGS-DSSSD---SITGIA 213 (323)
T ss_dssp GSSSSEEEEECCTT----SCEEEEESSCCTTSEE--EEEEEEECBCT---TSSCEEEESEEEETT-EEECC---CEEEEE
T ss_pred hccCcEEEEEccCC----CCCEEEECCcCccccc--cceEEEECCCC---CceEEEEECeEEECC-cccCC---CceEEE
Confidence 2 257999999853 479999999 666665 89999999753 268999999999999 66533 368999
Q ss_pred cccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEecCcEEEEccCCeEEEEecCCC
Q 011482 358 DSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKSDAS 437 (484)
Q Consensus 358 DSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~~~~ 437 (484)
||||++++||++++++|.+++..+. +....+.+.++ |++ .+|+|+|+| ||++++||+++|++.. .++
T Consensus 214 DSGTs~~~lp~~~~~~i~~~i~ga~--~~~~~g~~~~~-C~~-------~~P~i~f~f-gg~~~~i~~~~~~~~~--~~~ 280 (323)
T 1izd_A 214 DTGTTLLLLDDSIVDAYYEQVNGAS--YDSSQGGYVFP-SSA-------SLPDFSVTI-GDYTATVPGEYISFAD--VGN 280 (323)
T ss_dssp CTTCCSEEECHHHHHHHHTTSTTCE--EETTTTEEEEE-TTC-------CCCCEEEEE-TTEEEEECHHHHEEEE--CST
T ss_pred eCCCcceeCCHHHHHHHHHhCCCcE--EcCcCCEEEEE-CCC-------CCceEEEEE-CCEEEecCHHHeEEec--CCC
Confidence 9999999999999999998874321 12234567777 984 789999999 7899999999999875 346
Q ss_pred ceEEE-EEeCCCCCCceEEchhhhcceEEEEECCCCEEEEecCC
Q 011482 438 QVCLA-LASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGED 480 (484)
Q Consensus 438 ~~Cl~-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~ 480 (484)
..|++ |.+.+ ..+.||||++|||++|+|||++++|||||+++
T Consensus 281 ~~C~~~i~~~~-~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 281 GQTFGGIQSNS-GIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp TEEEESEEECT-TTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CeEEEEEEcCC-CCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 78995 77654 24689999999999999999999999999864
No 20
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=4.8e-54 Score=431.94 Aligned_cols=304 Identities=25% Similarity=0.445 Sum_probs=251.0
Q ss_pred cccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCCC--CCCCCCCCCCCCCCCCcceecCCCccccc
Q 011482 120 TEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCKS--CYNQQDPVFDPSISPSYKKVLCNSSTCHA 195 (484)
Q Consensus 120 ~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~~--C~~~~~~~ydps~Sst~~~v~C~s~~C~~ 195 (484)
..+||. . .+++|+++|.||| |++.|+|||||+++||+|.+|.. |.. ++.|||++|+||+..
T Consensus 3 ~~~~l~-~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~--~~~y~~~~SsT~~~~--------- 67 (329)
T 1htr_B 3 TYEPMA-Y---MDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTS--HSRFNPSESSTYSTN--------- 67 (329)
T ss_dssp CCCGGG-G---TTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT--SCCBCGGGCTTCEEE---------
T ss_pred ceeeeE-E---cCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCC--CCcCCCccCCCeEEC---------
Confidence 346777 3 3457999999999 99999999999999999999974 754 679999999999953
Q ss_pred ccccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCCC-C--CCcCeeeecCCCCCc
Q 011482 196 LEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGL-F--GGVSGLMGLGRSDLS 272 (484)
Q Consensus 196 ~~~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~~-~--~~~~GIlGLg~~~~S 272 (484)
.|.|.+.|++|+. .|.+++|+|++++..++++.|||++...+. + ...+||||||+..++
T Consensus 68 -----------------~~~~~i~Yg~gs~-~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s 129 (329)
T 1htr_B 68 -----------------GQTFSLQYGSGSL-TGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALS 129 (329)
T ss_dssp -----------------EEEEEEEETTEEE-EEEEEEEEEEETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCC
T ss_pred -----------------CcEEEEEeCCCCe-EEEEEeeeEEEcceEECceEEEEEEEccccccccCCCceEEecCCCccc
Confidence 2699999999997 999999999999999999999999988762 3 368999999999876
Q ss_pred cc------cchhhc---cCCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcC
Q 011482 273 LV------SQTSEI---FGGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGG 342 (484)
Q Consensus 273 l~------~ql~~~---~~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~ 342 (484)
.. .|+... ..++||+||.+. +....|.|+||+ +.++|. +++.|+|+... .+|.|.+++|+|++
T Consensus 130 ~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~-~~~~~G~l~fGg~d~~~~~--g~l~~~p~~~~----~~~~v~l~~i~v~~ 202 (329)
T 1htr_B 130 VDEATTAMQGMVQEGALTSPVFSVYLSNQ-QGSSGGAVVFGGVDSSLYT--GQIYWAPVTQE----LYWQIGIEEFLIGG 202 (329)
T ss_dssp CTTCCSHHHHHHHTTCSSSSEEEEEECSS-CSSEEEEEEESSCCGGGEE--EEEEEEEBCSS----SSCEEEECEEEETT
T ss_pred ccCCCCHHHHHHhcCCCCCCEEEEEEcCC-CCCCCcEEEEcccCHHHcC--CceEEEECCCC----ceEEEEEeEEEECC
Confidence 43 333332 258899999975 222389999999 656665 89999999864 79999999999999
Q ss_pred EEee-cCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEecCcEE
Q 011482 343 KQLQ-ASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEM 421 (484)
Q Consensus 343 ~~i~-~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~ 421 (484)
+.+. .. ....+||||||++++||+++|++|.+++.+.. ...+.+.++ |++.. .+|+|+|+| +|+++
T Consensus 203 ~~~~~~~--~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~----~~~g~~~~~-C~~~~-----~~P~i~f~f-~g~~~ 269 (329)
T 1htr_B 203 QASGWCS--EGCQAIVDTGTSLLTVPQQYMSALLQATGAQE----DEYGQFLVN-CNSIQ-----NLPSLTFII-NGVEF 269 (329)
T ss_dssp EECCTTT--TCEEEEECTTCCSEEEEGGGHHHHHHHHTCEE----CTTSCEEEC-GGGGG-----GSCCEEEEE-TTEEE
T ss_pred ceeeecC--CCceEEEecCCccEECCHHHHHHHHHHhCCee----cCCCeEEEe-CCCcc-----cCCcEEEEE-CCEEE
Confidence 8864 11 13689999999999999999999999986543 223556676 99765 789999999 78999
Q ss_pred EEccCCeEEEEecCCCceEE-EEEeCC---CCCC-ceEEchhhhcceEEEEECCCCEEEEecCC
Q 011482 422 TVDVTGIVYFVKSDASQVCL-ALASLS---YEDE-TGIIGNYQQKNQRVIYDTKNSQLGFAGED 480 (484)
Q Consensus 422 ~l~~~~~~~~~~~~~~~~Cl-~~~~~~---~~~~-~~IlG~~fl~~~~vvfD~~~~~IGFa~~~ 480 (484)
+|++++|+++.. +.|+ +|...+ ..++ .||||+.|||++|+|||++++|||||+++
T Consensus 270 ~i~~~~y~~~~~----g~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 270 PLPPSSYILSNN----GYCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp EECHHHHEEECS----SCEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EECHHHhcccCC----CEEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 999999998752 3899 677653 1234 79999999999999999999999999874
No 21
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=7.7e-54 Score=432.19 Aligned_cols=302 Identities=22% Similarity=0.416 Sum_probs=254.1
Q ss_pred cccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEe-----cCCCCCCCCCCCCCCCCCCCCCcceecCCCcc
Q 011482 120 TEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQ-----CQPCKSCYNQQDPVFDPSISPSYKKVLCNSST 192 (484)
Q Consensus 120 ~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~-----~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~ 192 (484)
..+||.+.. ++|+++|.||| |++.|++||||+++||+ |.+|..|.. ++.|||++|+||+.+
T Consensus 3 i~~~l~~~~----~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~--~~~y~~~~SsT~~~~------ 70 (339)
T 3fv3_A 3 ISLSLINEG----PSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKS--SGTFTPSSSSSYKNL------ 70 (339)
T ss_dssp EEEEEEECS----SSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTT--TCCBCGGGCTTCEEE------
T ss_pred eeeEEEcCC----CEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCC--CCcCCCccCcceeeC------
Confidence 467777653 46999999999 99999999999999998 666667864 679999999999964
Q ss_pred cccccccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCCCCCCcCeeeecCCCCCc
Q 011482 193 CHALEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGLFGGVSGLMGLGRSDLS 272 (484)
Q Consensus 193 C~~~~~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~~~~~~~GIlGLg~~~~S 272 (484)
.|.|.+.|++|+.+.|.+++|+|+|++..++++.|||++...+ .+||||||+..++
T Consensus 71 --------------------~~~~~i~Yg~gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~----~~GilGLg~~~~~ 126 (339)
T 3fv3_A 71 --------------------GAAFTIRYGDGSTSQGTWGKDTVTINGVSITGQQIADVTQTSV----DQGILGIGYTSNE 126 (339)
T ss_dssp --------------------EEEEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEESS----SSCEEECSCGGGC
T ss_pred --------------------CceEEEEECCCceEEEEEEEEEEEECCEEECceEEEEEEecCC----CceeEEecCcccc
Confidence 2599999999988899999999999999999999999998764 5899999998764
Q ss_pred ----------------cccchhhc---cCCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEE
Q 011482 273 ----------------LVSQTSEI---FGGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYI 332 (484)
Q Consensus 273 ----------------l~~ql~~~---~~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~ 332 (484)
++.|+... ..++||+||.+. ....|.|+||| +..+|. +++.|+|+... .+|.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~--~~~~G~l~fGg~d~~~~~--g~l~~~p~~~~----~~~~ 198 (339)
T 3fv3_A 127 AVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSP--SAETGTIIFGGVDNAKYS--GKLVAEQVTSS----QALT 198 (339)
T ss_dssp CCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCT--TCSEEEEEETEEETTSBS--SCCEEEEBCCS----SSCE
T ss_pred ccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCC--CCCCeEEEEeeechHHee--cceEEEecccC----ccEE
Confidence 44455443 247899999864 34589999999 667775 89999999875 5899
Q ss_pred EEEeEEEEcCEEeecCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEE
Q 011482 333 LNLTGISIGGKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVK 412 (484)
Q Consensus 333 v~l~~i~vg~~~i~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~ 412 (484)
|++++|+|+++.+... ..+||||||++++||++++++|.+++.+.....+...+.+.++ |+. . .+|.|+
T Consensus 199 v~l~~i~v~g~~~~~~----~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~~-C~~-~-----~~p~i~ 267 (339)
T 3fv3_A 199 ISLASVNLKGSSFSFG----DGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQYLYFID-CNT-D-----TSGTTV 267 (339)
T ss_dssp EEEEEEEESSCEEEEE----EEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETTEEEEEEC-TTC-C-----CCSEEE
T ss_pred EEEEEEEECCEeecCC----ccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccccCceEEEe-cCC-C-----CCCcEE
Confidence 9999999999987654 5899999999999999999999999986543211234556676 986 2 689999
Q ss_pred EEEecCcEEEEccCCeEEEEecCCCceEE-EEEeCCCCCCceEEchhhhcceEEEEECCCCEEEEecCCCCC
Q 011482 413 MEFEGNAEMTVDVTGIVYFVKSDASQVCL-ALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGEDCSS 483 (484)
Q Consensus 413 ~~f~gg~~~~l~~~~~~~~~~~~~~~~Cl-~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~C~~ 483 (484)
|+|.+|++++|++++|+++. ++..|+ +|.+ + +.||||+.|||++|+|||++++|||||+++|++
T Consensus 268 f~f~~g~~~~v~~~~~~~~~---~~~~C~~~i~~--~--~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 332 (339)
T 3fv3_A 268 FNFGNGAKITVPNTEYVYQN---GDGTCLWGIQP--S--DDTILGDNFLRHAYLLYNLDANTISIAQVKYTT 332 (339)
T ss_dssp EEETTSCEEEEEGGGGEEEC---SSSCEEESEEE--C--SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred EEECCCCEEEECHHHheeeC---CCCeEEEEEEe--C--CcEEeChHHHhCEEEEEECCCCEEEEEecCCCC
Confidence 99966899999999999864 446796 7776 2 569999999999999999999999999999975
No 22
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=3.7e-54 Score=431.12 Aligned_cols=302 Identities=22% Similarity=0.378 Sum_probs=248.5
Q ss_pred cccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCccccccccc
Q 011482 122 IPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFA 199 (484)
Q Consensus 122 ~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~~~~ 199 (484)
+||.+..+ .+|+++|.||| |++.|++||||+++||+|.+|..|.++.++.|||++|+||+..
T Consensus 3 ~~l~n~~d---~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~------------- 66 (320)
T 4aa9_A 3 EPLTSYLD---SQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNHHRFDPRKSSTFRNL------------- 66 (320)
T ss_dssp -----CCC---CCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEE-------------
T ss_pred ccceeccC---CEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCCCCCCCCCCcCeEcC-------------
Confidence 57777654 46999999999 9999999999999999999998544445689999999999953
Q ss_pred CCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCC-CC--CCcCeeeecCCCCCc----
Q 011482 200 TGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKG-LF--GGVSGLMGLGRSDLS---- 272 (484)
Q Consensus 200 ~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~-~~--~~~~GIlGLg~~~~S---- 272 (484)
.|.|.+.|++|+. .|.+++|+|++++..++++.|||++...+ .+ ...+||||||+..++
T Consensus 67 -------------~~~~~i~Yg~gs~-~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 132 (320)
T 4aa9_A 67 -------------GKPLSIHYGTGSM-EGFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYS 132 (320)
T ss_dssp -------------EEEEEEEETTEEE-EEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTC
T ss_pred -------------CcEEEEEECCcEE-EEEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccEEecCcccccccCC
Confidence 2599999999995 99999999999999999999999998876 23 357999999998665
Q ss_pred --cccchhhc---cCCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcCEEee
Q 011482 273 --LVSQTSEI---FGGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQ 346 (484)
Q Consensus 273 --l~~ql~~~---~~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~i~ 346 (484)
++.++... ..++||+||.+. ...|.|+||| +.++|. +++.|+|+... .+|.|.+++|+|+++.+.
T Consensus 133 ~~~~~~l~~~g~i~~~~Fs~~l~~~---~~~G~l~fGg~d~~~~~--g~l~~~p~~~~----~~w~v~l~~i~v~~~~~~ 203 (320)
T 4aa9_A 133 VPVFDNMMDRHLVARDLFSVYMDRN---GQGSMLTLGAIDPSYYT--GSLHWVPVTLQ----QYWQFTVDSVTINGVAVA 203 (320)
T ss_dssp CCHHHHHHHTTCSSSSEEEEECCSS---SSCCEEEETCCCGGGEE--EEEEEEECSSB----TTBEEEECEEEETTEEEE
T ss_pred CCHHHHHHhCCCCCCceEEEEeCCC---CCCeEEEEcccCHHHcc--CceEEEEcccC----CceEEEEeEEEECCEEec
Confidence 33444432 257899999964 4689999999 666675 89999999864 799999999999999876
Q ss_pred cCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEecCcEEEEccC
Q 011482 347 ASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVT 426 (484)
Q Consensus 347 ~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~ 426 (484)
.. ....+||||||++++||++++++|.+++.+.. ...+.+.++ |+... .+|+|+|+| +|++++|+++
T Consensus 204 ~~--~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~----~~~g~~~~~-C~~~~-----~~p~i~f~f-~g~~~~l~~~ 270 (320)
T 4aa9_A 204 CV--GGCQAILDTGTSVLFGPSSDILKIQMAIGATE----NRYGEFDVN-CGNLR-----SMPTVVFEI-NGRDYPLSPS 270 (320)
T ss_dssp ST--TCEEEEECTTCSSEEEEHHHHHHHHHHTTCEE----CTTSCEEEC-GGGGG-----GCCCEEEEE-TTEEEEECHH
T ss_pred cC--CCcEEEEECCCCcEECCHHHHHHHHHHhCCcc----cCCCcEEEe-CCCCC-----cCceEEEEE-CCEEEEECHH
Confidence 32 13689999999999999999999999886542 234567776 99765 789999999 6899999999
Q ss_pred CeEEEEecCCCceEE-EEEeCCCCCCceEEchhhhcceEEEEECCCCEEEEecCC
Q 011482 427 GIVYFVKSDASQVCL-ALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGED 480 (484)
Q Consensus 427 ~~~~~~~~~~~~~Cl-~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~ 480 (484)
+|+.. ++..|+ +|..... .+.||||++|||++|+|||.+++|||||+++
T Consensus 271 ~y~~~----~~~~C~~~i~~~~~-~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 271 AYTSK----DQGFCTSGFQGDNN-SELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp HHEEE----ETTEEEESEEEETT-CCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HhccC----CCCeEEEEEEcCCC-CCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 99965 346898 5776432 3679999999999999999999999999974
No 23
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=3.6e-53 Score=444.17 Aligned_cols=315 Identities=24% Similarity=0.449 Sum_probs=248.9
Q ss_pred cccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCC---CCCCCCCCCCCCCCCCCcceecCCCcccc
Q 011482 120 TEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCK---SCYNQQDPVFDPSISPSYKKVLCNSSTCH 194 (484)
Q Consensus 120 ~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~---~C~~~~~~~ydps~Sst~~~v~C~s~~C~ 194 (484)
..+||.+.. +++|+++|.||| |++.|+|||||+++||+|.+|. .|.. ++.|||++|+||+.
T Consensus 42 ~~~~l~n~~---~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~--~~~y~~~~SsT~~~--------- 107 (478)
T 1qdm_A 42 DIVALKNYM---NAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYL--HSRYKAGASSTYKK--------- 107 (478)
T ss_dssp CSGGGCCGG---GCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGG--SCCBCGGGCTTCBC---------
T ss_pred ceEEeEecc---CCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccC--CCCCCcccCCCeee---------
Confidence 558888754 456999999999 9999999999999999999995 6865 46999999999983
Q ss_pred cccccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCCC-C--CCcCeeeecCCCCC
Q 011482 195 ALEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGL-F--GGVSGLMGLGRSDL 271 (484)
Q Consensus 195 ~~~~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~~-~--~~~~GIlGLg~~~~ 271 (484)
..|.|.+.|++|+ +.|.+++|+|++++..++++.|||++...+. | ...+||||||+..+
T Consensus 108 -----------------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~ 169 (478)
T 1qdm_A 108 -----------------NGKPAAIQYGTGS-IAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEI 169 (478)
T ss_dssp -----------------CCCEEEEEETTEE-EEEEEEEEEEEETTEEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGG
T ss_pred -----------------CCcEEEEEcCCCC-eEEEEEEEEEEECCeEECCEEEEEEEecCCcccccccccceeccccccc
Confidence 2369999999998 4899999999999999999999999987652 3 46799999999987
Q ss_pred cccc------chhhc---cCCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEc
Q 011482 272 SLVS------QTSEI---FGGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIG 341 (484)
Q Consensus 272 Sl~~------ql~~~---~~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg 341 (484)
++.. ++... ..++||+||.+..+....|.|+||| +..+|. +++.|+|+... .+|.|.+++|+|+
T Consensus 170 s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~--G~l~~~pv~~~----~~w~v~l~~i~v~ 243 (478)
T 1qdm_A 170 SVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYV--GEHTYVPVTQK----GYWQFDMGDVLVG 243 (478)
T ss_dssp CGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEE--EEEEEEEEEEE----TTEEEEECCEEET
T ss_pred ccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcC--CCceEEeccCC----CeEEEEEeEEEEC
Confidence 7422 22221 2579999998752234589999999 666665 89999999864 7999999999999
Q ss_pred CEEeecCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhh----------------------c----------------
Q 011482 342 GKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQF----------------------S---------------- 383 (484)
Q Consensus 342 ~~~i~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~----------------------~---------------- 383 (484)
++.+.... ....+||||||++++||+++|++|.++|.+.. .
T Consensus 244 g~~~~~~~-~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~ 322 (478)
T 1qdm_A 244 GKSTGFCA-GGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTF 322 (478)
T ss_dssp TEECSTTT-TCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC--
T ss_pred CEEEeecC-CCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhcccccccc
Confidence 98854211 14689999999999999999999998885420 0
Q ss_pred --------------------------------------------------------------CCCCCCCCcccccccccC
Q 011482 384 --------------------------------------------------------------GFPSAPGFSILDTCFNLS 401 (484)
Q Consensus 384 --------------------------------------------------------------~~~~~~~~~~~~~C~~~~ 401 (484)
.++...+.+.++ |....
T Consensus 323 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~-C~~~~ 401 (478)
T 1qdm_A 323 DGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVD-CGSLG 401 (478)
T ss_dssp -------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEEC-GGGGT
T ss_pred CccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEee-ccccc
Confidence 001112345555 66544
Q ss_pred CCcccccceEEEEEecCcEEEEccCCeEEEEecCCCceEE-EEEeCC---CCCCceEEchhhhcceEEEEECCCCEEEEe
Q 011482 402 AYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKSDASQVCL-ALASLS---YEDETGIIGNYQQKNQRVIYDTKNSQLGFA 477 (484)
Q Consensus 402 ~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~~~~~~Cl-~~~~~~---~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa 477 (484)
.+|+|+|+| ||++++|+|++|++.........|+ +|...+ ..++.||||++|||++|+|||++++|||||
T Consensus 402 -----~lP~i~f~~-gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA 475 (478)
T 1qdm_A 402 -----SMPDIEFTI-GGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFA 475 (478)
T ss_dssp -----TCCCEEEEE-TTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEE
T ss_pred -----ccccEEEEE-CCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEE
Confidence 799999999 7899999999999875322245899 476543 124689999999999999999999999999
Q ss_pred cCC
Q 011482 478 GED 480 (484)
Q Consensus 478 ~~~ 480 (484)
++.
T Consensus 476 ~a~ 478 (478)
T 1qdm_A 476 KAA 478 (478)
T ss_dssp EEC
T ss_pred eCC
Confidence 863
No 24
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=4e-54 Score=431.37 Aligned_cols=295 Identities=24% Similarity=0.364 Sum_probs=244.4
Q ss_pred ceeEEEEEEEcCEEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCcccccccccCCCCCCCCCCCC
Q 011482 132 TLNYIATIELGGRNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFATGNSGVCSSSSP 211 (484)
Q Consensus 132 ~~~Y~~~v~iGtq~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~~~~~~~~~~C~~~~~ 211 (484)
+.+|+++|.||.|++.|+|||||+++||+|.+|..|.++.++.|||++|+ ++.
T Consensus 14 ~~~Y~~~i~iG~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~-------------------------- 66 (323)
T 1bxo_A 14 DEEYITPVTIGGTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATG-KEL-------------------------- 66 (323)
T ss_dssp GSCEEEEEEETTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHC-EEE--------------------------
T ss_pred CCEEEEEEEECCEEEEEEEeCCCcceEEecCCCCchhccCCCCCCcccCC-ccc--------------------------
Confidence 45799999999999999999999999999999998887888999999998 552
Q ss_pred CCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCCCC---CCcCeeeecCCCCCccc---------cchhh
Q 011482 212 PDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGLF---GGVSGLMGLGRSDLSLV---------SQTSE 279 (484)
Q Consensus 212 ~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~~~---~~~~GIlGLg~~~~Sl~---------~ql~~ 279 (484)
..|.|.+.|+||+.+.|.+++|+|++++.+++++.|||++...+.+ ...+||||||+..++.+ .|+..
T Consensus 67 ~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~ 146 (323)
T 1bxo_A 67 SGYTWSISYGDGSSASGNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKS 146 (323)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGG
T ss_pred CCCeEEEEeCCCCeEEEEEEEEEEEECCEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHH
Confidence 2369999999999779999999999999999999999999876633 46899999999876643 23332
Q ss_pred c-cCCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcCEEeecCCCCCCcEEE
Q 011482 280 I-FGGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQASGFAKGGILI 357 (484)
Q Consensus 280 ~-~~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~i~~~~~~~~~~ii 357 (484)
. ..++||+||.+. ..|.|+||| +.++|. +++.|+|+.... .+|.|.+++|+|++ +... ...+||
T Consensus 147 ~i~~~~FS~~L~~~----~~G~l~fGg~d~~~~~--g~l~~~p~~~~~---~~w~v~l~~i~v~~--~~~~---~~~aii 212 (323)
T 1bxo_A 147 SLAQPLFAVALKHQ----QPGVYDFGFIDSSKYT--GSLTYTGVDNSQ---GFWSFNVDSYTAGS--QSGD---GFSGIA 212 (323)
T ss_dssp GBSSSEEEEECCSS----SCEEEEESSCCGGGBS--SCCEEEECBCTT---SSCEEEEEEEEETT--EEEE---EEEEEE
T ss_pred hcCCcEEEEEEeCC----CCceEEEeCcChhhcc--CceEEEECCCCC---CeEEEEEeeEEECC--ccCC---CceEEE
Confidence 2 257999999853 479999999 656665 899999997542 68999999999999 3322 368999
Q ss_pred cccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEecCcEEEEccCCeEEEEecCCC
Q 011482 358 DSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKSDAS 437 (484)
Q Consensus 358 DSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~~~~ 437 (484)
||||++++||++++++|.+++..+. +....+.+.++ |+. .+|+|+|+| ||++++||+++|++... .+.
T Consensus 213 DSGTs~~~lP~~~~~~l~~~i~~a~--~~~~~g~~~~~-C~~-------~~P~i~f~f-gg~~~~l~~~~~~~~~~-~~~ 280 (323)
T 1bxo_A 213 DTGTTLLLLDDSVVSQYYSQVSGAQ--QDSNAGGYVFD-CST-------NLPDFSVSI-SGYTATVPGSLINYGPS-GDG 280 (323)
T ss_dssp CTTCSSEEECHHHHHHHHTTSTTCE--EETTTTEEEEC-TTC-------CCCCEEEEE-TTEEEEECHHHHEEEEC-SSS
T ss_pred eCCCCceeCCHHHHHHHHHhCCCce--EcCcCCEEEEE-CCC-------CCceEEEEE-CCEEEEECHHHeEEecc-CCC
Confidence 9999999999999999998874321 12234566776 984 789999999 78999999999998753 234
Q ss_pred ceEEE-EEeCCCCCCceEEchhhhcceEEEEECCCCEEEEecCC
Q 011482 438 QVCLA-LASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGED 480 (484)
Q Consensus 438 ~~Cl~-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~ 480 (484)
..|++ |.+.+ ..+.||||++|||++|+|||++++|||||+++
T Consensus 281 ~~C~~~i~~~~-~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 281 STCLGGIQSNS-GIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp SCEEESEEECT-TCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CeEEEEEECCC-CCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 78995 76654 24689999999999999999999999999864
No 25
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.1e-53 Score=431.46 Aligned_cols=309 Identities=22% Similarity=0.408 Sum_probs=254.2
Q ss_pred ccccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCC----CCCCCCCCCCCCCCCCCcceecCCCcc
Q 011482 119 NTEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCK----SCYNQQDPVFDPSISPSYKKVLCNSST 192 (484)
Q Consensus 119 ~~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~----~C~~~~~~~ydps~Sst~~~v~C~s~~ 192 (484)
...+||.+..+ .+|+++|.||| |++.|++||||+++||+|.+|. .|. .++.|||++|+||+..
T Consensus 7 ~~~~~l~n~~d---~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~--~~~~y~~~~SsT~~~~------ 75 (341)
T 3k1w_A 7 TSSVILTNYMD---TQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACV--YHKLFDASDSSSYKHN------ 75 (341)
T ss_dssp CEEEEEEEETT---TEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHH--TSCCBCGGGCTTCEEE------
T ss_pred CccccceEccC---CEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCccc--CCCCCCCCcCcCeeEC------
Confidence 46788888654 46999999999 9999999999999999999997 565 4579999999999942
Q ss_pred cccccccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCCC-C--CCcCeeeecCCC
Q 011482 193 CHALEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGL-F--GGVSGLMGLGRS 269 (484)
Q Consensus 193 C~~~~~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~~-~--~~~~GIlGLg~~ 269 (484)
.|.|.+.|++|+ +.|.+++|+|+|++..+ ++.|||++...+. + ...+||||||+.
T Consensus 76 --------------------~~~~~i~Yg~gs-~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~ 133 (341)
T 3k1w_A 76 --------------------GTELTLRYSTGT-VSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFI 133 (341)
T ss_dssp --------------------EEEEEEEETTEE-EEEEEEEEEEEETTEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCG
T ss_pred --------------------CCEEEEEECCcE-EEEEEEEEEEEECCcee-eEEEEEEEEccccccccCCcceEEECCch
Confidence 269999999999 59999999999999999 9999999988763 2 367999999998
Q ss_pred CCc------cccchhhc---cCCeeEEeeCCCC--CCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeE
Q 011482 270 DLS------LVSQTSEI---FGGLFSYCLPSTQ--DAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTG 337 (484)
Q Consensus 270 ~~S------l~~ql~~~---~~~~FS~~L~~~~--~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~ 337 (484)
..+ ++.++... ..++||+||.+.. +....|.|+||| +.++|. +++.|+|+... .+|.|.+++
T Consensus 134 ~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~--g~l~~~p~~~~----~~w~v~l~~ 207 (341)
T 3k1w_A 134 EQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYE--GNFHYINLIKT----GVWQIQMKG 207 (341)
T ss_dssp GGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEE--EEEEEEECSST----TSCEEEECC
T ss_pred hhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHcc--CceEEEecCCC----CEEEEEEeE
Confidence 775 33444432 2578999999752 113489999999 666775 89999999864 799999999
Q ss_pred EEEcCEEeecCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEec
Q 011482 338 ISIGGKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEG 417 (484)
Q Consensus 338 i~vg~~~i~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~g 417 (484)
|+|+++.+.... ...+||||||++++||++++++|.+++.+.. ...+ +.++ |.... .+|+|+|+| +
T Consensus 208 i~v~~~~~~~~~--~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~----~~~g-~~~~-C~~~~-----~~p~i~f~f-~ 273 (341)
T 3k1w_A 208 VSVGSSTLLCED--GCLALVDTGASYISGSTSSIEKLMEALGAKK----RLFD-YVVK-CNEGP-----TLPDISFHL-G 273 (341)
T ss_dssp EEETTEEEECTT--CEEEEECTTCSSEEECHHHHHHHHHHHTCEE----CSSC-EEEE-GGGGG-----GCCCEEEEE-T
T ss_pred EEECCEEeecCC--CCEEEEECCCChhcCCHHHHHHHHHHcCCee----cCCC-eEEe-CCCCC-----cCCcEEEEE-C
Confidence 999999754221 3689999999999999999999999987653 1234 7776 98765 789999999 6
Q ss_pred CcEEEEccCCeEEEEecCCCceEE-EEEeCC---CCCCceEEchhhhcceEEEEECCCCEEEEecCC
Q 011482 418 NAEMTVDVTGIVYFVKSDASQVCL-ALASLS---YEDETGIIGNYQQKNQRVIYDTKNSQLGFAGED 480 (484)
Q Consensus 418 g~~~~l~~~~~~~~~~~~~~~~Cl-~~~~~~---~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~ 480 (484)
|++++|++++|+++....++..|+ +|...+ ...+.||||++|||++|+|||.+++|||||+++
T Consensus 274 g~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 274 GKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp TEEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CEEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 899999999999765433467899 677642 224689999999999999999999999999974
No 26
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=6.1e-54 Score=445.79 Aligned_cols=304 Identities=22% Similarity=0.396 Sum_probs=249.6
Q ss_pred cccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCccccccc
Q 011482 120 TEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALE 197 (484)
Q Consensus 120 ~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~~ 197 (484)
..+||.+.. +++|+++|.||| |++.|++||||+++||+|.+|..+.++.++.|||++|+||+..
T Consensus 128 ~~~~L~n~~---~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~~~ydps~SsT~~~~----------- 193 (453)
T 2bju_A 128 DNIELVDFQ---NIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTYEKD----------- 193 (453)
T ss_dssp EEEEEEEET---TTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGSCCBCGGGCTTCEEE-----------
T ss_pred CceeeEecC---CCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCCCcCCCccCCceeEC-----------
Confidence 457887643 457999999999 9999999999999999999996433344689999999999953
Q ss_pred ccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccC--CC-C--CCcCeeeecCCCCCc
Q 011482 198 FATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNK--GL-F--GGVSGLMGLGRSDLS 272 (484)
Q Consensus 198 ~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~--~~-~--~~~~GIlGLg~~~~S 272 (484)
.|.|.+.|+||+. .|.+++|+|++++.+++ +.|||++... +. + ...+||||||++.++
T Consensus 194 ---------------~~~~~i~YgdGs~-~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s 256 (453)
T 2bju_A 194 ---------------GTKVEMNYVSGTV-SGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLS 256 (453)
T ss_dssp ---------------EEEEEEECSSSEE-EEEEEEEEEEETTEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGS
T ss_pred ---------------CcEEEEEcCCCCe-EEEEEEEEEEEeCcEEE-EEEEEEEEecccCccccccCCceeEeccCCccc
Confidence 2699999999994 99999999999999999 9999999987 52 3 478999999998776
Q ss_pred cc------cchhhc---cCCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcC
Q 011482 273 LV------SQTSEI---FGGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGG 342 (484)
Q Consensus 273 l~------~ql~~~---~~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~ 342 (484)
.. .++... ..++||+||++. +...|.|+||| +.++|. +++.|+|+... .+|.|.++ |+|++
T Consensus 257 ~~~~~~~~~~L~~qg~i~~~~FS~~L~~~--~~~~G~l~fGg~D~~~y~--G~l~~~pv~~~----~~w~V~l~-I~Vgg 327 (453)
T 2bju_A 257 IGSVDPIVVELKNQNKIENALFTFYLPVH--DKHTGFLTIGGIEERFYE--GPLTYEKLNHD----LYWQITLD-AHVGN 327 (453)
T ss_dssp TTCCCCHHHHHHHTTSSSSCEEEEECCBT--TTBCEEEEESSCCGGGEE--EEEEEEEEEEE----TTEEEEEE-EEETT
T ss_pred ccCCCcHHHHHHHCCCCCCCEEEEEeCCC--CCCCeEEEECCCCHHHcC--CceEEEecCCC----ceEEEEEE-EEECc
Confidence 43 233332 258999999975 35689999999 556665 89999999864 79999999 99999
Q ss_pred EEeecCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCC-CcccccccccCCCcccccceEEEEEecCcEE
Q 011482 343 KQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPG-FSILDTCFNLSAYQEVNIPLVKMEFEGNAEM 421 (484)
Q Consensus 343 ~~i~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~ 421 (484)
+.+ ....+||||||++++||+++|++|.+++.+. +...+ .+.++ |+. . .+|+|+|+| ||+++
T Consensus 328 ~~~-----~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~----~~~~g~~~~v~-C~~-~-----~~P~itf~f-gg~~~ 390 (453)
T 2bju_A 328 IML-----EKANCIVDSGTSAITVPTDFLNKMLQNLDVI----KVPFLPFYVTL-CNN-S-----KLPTFEFTS-ENGKY 390 (453)
T ss_dssp EEE-----EEEEEEECTTCCSEEECHHHHHHHTTTSSCE----ECTTSSCEEEE-TTC-T-----TCCCEEEEC-SSCEE
T ss_pred EEe-----ccccEEEcCCCCeEecCHHHHHHHHHHhCCc----ccCCCceEEEe-cCC-C-----CCCcEEEEE-CCEEE
Confidence 432 2468999999999999999999999877543 23344 56665 986 3 789999999 68999
Q ss_pred EEccCCeEEEEecCCCceEE-EEEeCCCCCCceEEchhhhcceEEEEECCCCEEEEecCC
Q 011482 422 TVDVTGIVYFVKSDASQVCL-ALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGED 480 (484)
Q Consensus 422 ~l~~~~~~~~~~~~~~~~Cl-~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~ 480 (484)
+|++++|+++....++..|+ +|.+.+...+.||||++|||++|+|||.+++|||||+++
T Consensus 391 ~l~~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 391 TLEPEYYLQHIEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp EECHHHHEEECTTTSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EECHHHhEeecccCCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99999999875322456898 788765334689999999999999999999999999864
No 27
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=2.2e-53 Score=429.41 Aligned_cols=304 Identities=23% Similarity=0.427 Sum_probs=246.8
Q ss_pred cccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCC--CC---------CCCCCCCCCCCCCCCCCccee
Q 011482 120 TEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQP--CK---------SCYNQQDPVFDPSISPSYKKV 186 (484)
Q Consensus 120 ~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~--C~---------~C~~~~~~~ydps~Sst~~~v 186 (484)
..+|+.+. +++|+++|.||| |++.|++||||+++||+|.. |. .|. .++.|||++|+||+.+
T Consensus 3 v~~~l~~~----~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~--~~~~y~~~~SsT~~~~ 76 (342)
T 3pvk_A 3 VPVTLHNE----QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCK--QKGTYDPSGSSASQDL 76 (342)
T ss_dssp EEEEEEEC----SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGG--TTCCBCGGGCTTCEEE
T ss_pred cceEEecC----CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCC--CCCcCCCccCcceeec
Confidence 34566553 357999999999 99999999999999998653 53 454 3679999999999954
Q ss_pred cCCCcccccccccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCCCCCCcCeeeec
Q 011482 187 LCNSSTCHALEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGLFGGVSGLMGL 266 (484)
Q Consensus 187 ~C~s~~C~~~~~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~~~~~~~GIlGL 266 (484)
.|.|.+.|+||+.+.|.+++|+|+|++..++++.|||++... ..+|||||
T Consensus 77 --------------------------~~~~~i~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~----~~~GilGL 126 (342)
T 3pvk_A 77 --------------------------NTPFKIGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS----IDQGILGV 126 (342)
T ss_dssp --------------------------EEEEEEECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES----SSSCEEEC
T ss_pred --------------------------CCeEEEEecCCCeEEEEEEEEEEEECCEEecceEEEEEEccC----CCccEEEe
Confidence 259999999999889999999999999999999999999875 57999999
Q ss_pred CCCCC-------ccccchhhc---cCCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEE
Q 011482 267 GRSDL-------SLVSQTSEI---FGGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNL 335 (484)
Q Consensus 267 g~~~~-------Sl~~ql~~~---~~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l 335 (484)
|+..+ +++.|+... ..++||+||.+. ....|.|+||| +..+|. +++.|+|+... .+|.|.+
T Consensus 127 g~~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~--~~~~G~l~fGg~d~~~~~--g~l~~~p~~~~----~~~~v~l 198 (342)
T 3pvk_A 127 GYKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSP--DAATGQIIFGGVDNAKYS--GSLIALPVTSD----RELRISL 198 (342)
T ss_dssp SCGGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCT--TCSEEEEEETEEETTSBS--SCCEEEECCCS----SSCEEEE
T ss_pred cCccccccccCCcHHHHHHhcCCCCCceEEEEeCCC--CCCCcEEEECccCcccee--eeeEEeecCcc----ceEEEEE
Confidence 99874 456666543 247899999864 34589999999 667775 89999999876 5899999
Q ss_pred eEEEEcCEEeecCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEE
Q 011482 336 TGISIGGKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEF 415 (484)
Q Consensus 336 ~~i~vg~~~i~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f 415 (484)
++|+|+++.+... ...+||||||++++||++++++|.+++.+.........+.+.++ |+ ..|+|+|+|
T Consensus 199 ~~i~v~g~~~~~~---~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~~-C~--------~~p~i~f~f 266 (342)
T 3pvk_A 199 GSVEVSGKTINTD---NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDSNGNSFYEVD-CN--------LSGDVVFNF 266 (342)
T ss_dssp EEEEETTEEEEEE---EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEECTTSCEEEEEC-SC--------CCSEEEEEE
T ss_pred eEEEECCEEecCC---CceEEEeCCCCCeecCHHHHHHHHHHcCCeecccCCCceEEEEe-cC--------CCCceEEEE
Confidence 9999999987653 25899999999999999999999999976643211112236666 98 359999999
Q ss_pred ecCcEEEEccCCeEEEEecCC---CceEE-EEEeCCCCCCceEEchhhhcceEEEEECCCCEEEEecCCCCC
Q 011482 416 EGNAEMTVDVTGIVYFVKSDA---SQVCL-ALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGEDCSS 483 (484)
Q Consensus 416 ~gg~~~~l~~~~~~~~~~~~~---~~~Cl-~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~C~~ 483 (484)
++|++++||+++|+++..... ...|+ ++.+. +.||||+.|||++|+|||.+++|||||+++|++
T Consensus 267 ~~g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~----~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 3pvk_A 267 SKNAKISVPASEFAASLQGDDGQPYDKCQLLFDVN----DANILGDNFLRSAYIVYDLDDNEISLAQVKYTS 334 (342)
T ss_dssp STTCEEEEEGGGGEEC----------CEEESEEEC----TTCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred CCCCEEEEcHHHheeeccccCCCcCCeeEEEEeeC----CCeEeCHHHHhcEEEEEECCCCEEEEEecCCCC
Confidence 768999999999998743212 26798 56552 569999999999999999999999999999974
No 28
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.1e-52 Score=436.78 Aligned_cols=304 Identities=21% Similarity=0.373 Sum_probs=251.1
Q ss_pred CccccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCC--CCCCCCCCCCCCCCCCCcceecCCCccc
Q 011482 118 SNTEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCK--SCYNQQDPVFDPSISPSYKKVLCNSSTC 193 (484)
Q Consensus 118 ~~~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~--~C~~~~~~~ydps~Sst~~~v~C~s~~C 193 (484)
....+||.+.. +.+|+++|.||| |++.|++||||+++||+|.+|. .|. .++.|||++|+||+..
T Consensus 125 ~~~~~pL~n~~---d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~--~~~~ydps~SsT~~~~------- 192 (451)
T 3qvc_A 125 EFDNVELKDLA---NVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCE--SKNHYDSSKSKTYEKD------- 192 (451)
T ss_dssp --CCCCGGGGB---CEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGT--TSCCBCGGGCTTCEEE-------
T ss_pred cCCccceeecC---CCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccC--CCCCCCCCCCcccccC-------
Confidence 34667888765 456999999999 9999999999999999999994 574 4679999999999952
Q ss_pred ccccccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEec----cCCCC--CCcCeeeecC
Q 011482 194 HALEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRN----NKGLF--GGVSGLMGLG 267 (484)
Q Consensus 194 ~~~~~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~----~~~~~--~~~~GIlGLg 267 (484)
.|.|.+.|+||+ +.|.+++|+|++++..++ +.|||++. ..+ + ...+||||||
T Consensus 193 -------------------~~~f~i~YgdGs-~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg 250 (451)
T 3qvc_A 193 -------------------DTPVKLTSKAGT-ISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLG 250 (451)
T ss_dssp -------------------EEEEEEECSSEE-EEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTH-HHHSCCCEEEECS
T ss_pred -------------------CCEEEEEECCCE-EEEEEEEEEEEECCEEEE-EEEEEEEeccccCCC-ccCCCCCEEEecC
Confidence 259999999999 699999999999999999 99999998 655 4 3679999999
Q ss_pred CCCCc------cccchhhc---cCCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeE
Q 011482 268 RSDLS------LVSQTSEI---FGGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTG 337 (484)
Q Consensus 268 ~~~~S------l~~ql~~~---~~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~ 337 (484)
++.++ ++.++... ..++||+||.+. ....|.|+||| |.++|. +++.|+|+... .+|.|.++
T Consensus 251 ~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~--~~~~G~l~fGgiD~s~y~--G~l~~~pv~~~----~~w~v~l~- 321 (451)
T 3qvc_A 251 WKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPE--NKNKGYLTIGGIEERFFD--GPLNYEKLNHD----LMWQVDLD- 321 (451)
T ss_dssp SBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTT--CTTEEEEEESSCCGGGEE--EEEEEEECSST----TSSEEEEE-
T ss_pred CCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCC--CCCCCEEEECCcchhhcC--CceEEEEcccC----CeeEEEEE-
Confidence 98765 33444433 257899999975 34589999999 666775 89999999864 79999999
Q ss_pred EEEcCEEeecCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEec
Q 011482 338 ISIGGKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEG 417 (484)
Q Consensus 338 i~vg~~~i~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~g 417 (484)
|+|+++ ... ...+||||||++++||++++++|.+++.+... ...+.+.++ |. .. .+|+|+|+| |
T Consensus 322 I~Vgg~-~~~----~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~---~~~g~y~v~-C~-~~-----~~P~itf~f-g 385 (451)
T 3qvc_A 322 VHFGNV-SSK----KANVILDSATSVITVPTEFFNQFVESASVFKV---PFLSLYVTT-CG-NT-----KLPTLEYRS-P 385 (451)
T ss_dssp EEETTE-EEE----EEEEEECTTBSSEEECHHHHHHHHTTTTCEEC---TTSSCEEEE-TT-CT-----TCCCEEEEE-T
T ss_pred EEECCc-cCC----CceEEEeCCCccccCCHHHHHHHHHHcCCeec---CCCCeEEee-CC-cC-----cCCcEEEEE-C
Confidence 999998 211 36899999999999999999999988865422 224667776 98 44 789999999 6
Q ss_pred CcEEEEccCCeEEEEecCCCceEE-EEEeCCCCCCceEEchhhhcceEEEEECCCCEEEEecCC
Q 011482 418 NAEMTVDVTGIVYFVKSDASQVCL-ALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGED 480 (484)
Q Consensus 418 g~~~~l~~~~~~~~~~~~~~~~Cl-~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~ 480 (484)
|++++||+++|+++....++..|+ ++.+.+...+.||||++|||++|+|||.+++|||||+++
T Consensus 386 g~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 386 NKVYTLEPKQYLEPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp TEEEEECHHHHEEECTTTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEcHHHheeecccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 899999999999876433467898 677654324689999999999999999999999999974
No 29
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=9.7e-52 Score=423.70 Aligned_cols=306 Identities=23% Similarity=0.378 Sum_probs=241.1
Q ss_pred eEEEEEEEcC--EEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCcccccccccCCCCCCCCCCCC
Q 011482 134 NYIATIELGG--RNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFATGNSGVCSSSSP 211 (484)
Q Consensus 134 ~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~~~~~~~~~~C~~~~~ 211 (484)
.|+++|.||| |++.|+|||||+++||+|.+|..| ++.|||++|+||+..
T Consensus 14 ~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~----~~~f~~~~SsT~~~~------------------------- 64 (383)
T 2ewy_A 14 GYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYI----DTYFDTERSSTYRSK------------------------- 64 (383)
T ss_dssp EEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTB----SCCCCGGGCTTCEEE-------------------------
T ss_pred cEEEEEEecCCCceEEEEEecCCCceEEecCCCCcc----ccCcccccCccceeC-------------------------
Confidence 5999999999 999999999999999999999776 468999999999953
Q ss_pred CCCeeeEEcCCCceEeEEEEEEEEEecccc-cc-ceEEEEEeccCCCC---CCcCeeeecCCCCCcc------------c
Q 011482 212 PDCNYFVSYGDGSYTRGELGREHLGLGKAS-VN-DFIFGCGRNNKGLF---GGVSGLMGLGRSDLSL------------V 274 (484)
Q Consensus 212 ~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~-~~-~~~fG~~~~~~~~~---~~~~GIlGLg~~~~Sl------------~ 274 (484)
.|.|.+.|++|+. .|.+++|+|+|++.. +. .+.|+|.....+.| ...+||||||+..++. .
T Consensus 65 -~~~~~i~Yg~Gs~-~G~~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~ 142 (383)
T 2ewy_A 65 -GFDVTVKYTQGSW-TGFVGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLV 142 (383)
T ss_dssp -EEEEEEECSSCEE-EEEEEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHH
T ss_pred -CceEEEEECCcEE-EEEEEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHH
Confidence 2699999999997 899999999998643 22 36789887766544 3579999999987653 3
Q ss_pred cchhhccCCeeEEeeCCC-----CCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcCEEee--
Q 011482 275 SQTSEIFGGLFSYCLPST-----QDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQ-- 346 (484)
Q Consensus 275 ~ql~~~~~~~FS~~L~~~-----~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~i~-- 346 (484)
+|... .++||+||... ......|.|+||| +.++|. +++.|+|+... .+|.|.+++|+|+++.+.
T Consensus 143 ~q~~i--~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~--g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~~~ 214 (383)
T 2ewy_A 143 TQANI--PNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYK--GDIWYTPIKEE----WYYQIEILKLEIGGQSLNLD 214 (383)
T ss_dssp HHHTC--CSCEEEEECCC---------CCEEEEETSCCGGGCC--SCEEEEECSSB----TTBBCCEEEEEETTEECCCC
T ss_pred HccCC--CcceEEEeeccccccccCCCCCeEEEeCccchhhcc--CccEEEecCCC----ceEEEEEEEEEECCEEcccc
Confidence 34332 57999999631 1234579999999 556664 89999999875 699999999999999864
Q ss_pred cCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCC---CcccccccccCCCcccccceEEEEEecC-----
Q 011482 347 ASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPG---FSILDTCFNLSAYQEVNIPLVKMEFEGN----- 418 (484)
Q Consensus 347 ~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~P~i~~~f~gg----- 418 (484)
...+....+||||||++++||+++|++|+++|.+.........+ .+.++ |++........+|+|+|+|.|+
T Consensus 215 ~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~-C~~~~~~~~~~~P~i~f~f~g~~~~~~ 293 (383)
T 2ewy_A 215 CREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLA-CWTNSETPWSYFPKISIYLRDENSSRS 293 (383)
T ss_dssp TTTTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEE-EECSSSCGGGGSCCEEEEEECSSTTEE
T ss_pred ccccCCccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccc-cccCCcccHhhCCcEEEEECCCCCCce
Confidence 33344468999999999999999999999999887532111111 12454 9976543334789999999764
Q ss_pred cEEEEccCCeEEEEecC-CCceEEEE--EeCCCCCCceEEchhhhcceEEEEECCCCEEEEecCCCC
Q 011482 419 AEMTVDVTGIVYFVKSD-ASQVCLAL--ASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGEDCS 482 (484)
Q Consensus 419 ~~~~l~~~~~~~~~~~~-~~~~Cl~~--~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~C~ 482 (484)
.+++|++++|+++.... .+..|+++ .+. .+.||||+.|||++|+|||++++|||||+++|.
T Consensus 294 ~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~---~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 357 (383)
T 2ewy_A 294 FRITILPQLYIQPMMGAGLNYECYRFGISPS---TNALVIGATVMEGFYVIFDRAQKRVGFAASPCA 357 (383)
T ss_dssp EEEEECHHHHEEEECCCTTCSEEEEESEEEE---SSCEEECHHHHTTEEEEEETTTTEEEEEECTTC
T ss_pred EEEEEChHHheeecccCCCCceeEEEEecCC---CCcEEEChHHhCCeeEEEECCCCeEEEEeccCC
Confidence 37999999999876321 35689853 432 257999999999999999999999999999996
No 30
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=2.9e-51 Score=421.77 Aligned_cols=310 Identities=21% Similarity=0.378 Sum_probs=243.8
Q ss_pred eeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCcccccccccCCCCCCCCCCC
Q 011482 133 LNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFATGNSGVCSSSS 210 (484)
Q Consensus 133 ~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~~~~~~~~~~C~~~~ 210 (484)
.+|+++|.||| |++.|+|||||+++||+|.+|..| ++.|||++|+||+.+
T Consensus 21 ~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~----~~~y~~~~SsT~~~~------------------------ 72 (395)
T 2qp8_A 21 QGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL----HRYYQRQLSSTYRDL------------------------ 72 (395)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC----SCCCCGGGCTTCEEE------------------------
T ss_pred ceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc----cCCcCcccCCCceeC------------------------
Confidence 46999999999 999999999999999999998765 469999999999953
Q ss_pred CCCCeeeEEcCCCceEeEEEEEEEEEec-ccccc-ceEEEEEeccCCCC---CCcCeeeecCCCCCccc--------cch
Q 011482 211 PPDCNYFVSYGDGSYTRGELGREHLGLG-KASVN-DFIFGCGRNNKGLF---GGVSGLMGLGRSDLSLV--------SQT 277 (484)
Q Consensus 211 ~~~C~~~~~Ygdgs~~~G~~~~Dtltlg-~~~~~-~~~fG~~~~~~~~~---~~~~GIlGLg~~~~Sl~--------~ql 277 (484)
.|.|.+.|++|+. .|.+++|+|+++ +..++ .+.|++.....+.| ...+||||||+..++.. .++
T Consensus 73 --~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~g~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l 149 (395)
T 2qp8_A 73 --RKGVYVPYTQGKW-EGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSL 149 (395)
T ss_dssp --EEEEEEECSSCEE-EEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred --CceEEEEECCcEE-EEEEEeEEEEECCCCCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHH
Confidence 2699999999997 899999999998 55554 36788887665544 36799999999876532 233
Q ss_pred hhc--cCCeeEEeeCCCC--------CCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcCEEee
Q 011482 278 SEI--FGGLFSYCLPSTQ--------DAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQ 346 (484)
Q Consensus 278 ~~~--~~~~FS~~L~~~~--------~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~i~ 346 (484)
... ..++||+||.+.. .....|.|+||| +..+|. +++.|+|+... .+|.|.|++|+|+++.+.
T Consensus 150 ~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~--g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~ 223 (395)
T 2qp8_A 150 VKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYT--GSLWYTPIRRE----WYYEVIIVRVEINGQDLK 223 (395)
T ss_dssp HHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEE--EEEEEEECCSB----TTBBCCEEEEEETTEECC
T ss_pred HHccCCcceEEEEeccccccccccccccCCCcEEEECCcCccccc--CceEEeccCCC----ceEEEEEEEEEECCEEcc
Confidence 322 2479999997520 013579999999 556665 89999999874 699999999999999864
Q ss_pred --cCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCC---CcccccccccCCCcccccceEEEEEecCc--
Q 011482 347 --ASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPG---FSILDTCFNLSAYQEVNIPLVKMEFEGNA-- 419 (484)
Q Consensus 347 --~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~P~i~~~f~gg~-- 419 (484)
...+....+||||||++++||+++|++|+++|.+.........+ .+.++ |+.........+|+|+|+|.|+.
T Consensus 224 ~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~-C~~~~~~~~~~~P~i~f~f~g~~~~ 302 (395)
T 2qp8_A 224 MDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLV-CWQAGTTPWNIFPVISLYLMGEVTN 302 (395)
T ss_dssp CCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCE-EESTTCCCGGGSCCEEEEEECSSTT
T ss_pred cCccccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCcccccccccc-ccccccchHhhCCcEEEEEccCCCC
Confidence 33333468999999999999999999999999987532111111 12354 99766444457999999997653
Q ss_pred ---EEEEccCCeEEEEec-C-CCceEEE--EEeCCCCCCceEEchhhhcceEEEEECCCCEEEEecCCCCC
Q 011482 420 ---EMTVDVTGIVYFVKS-D-ASQVCLA--LASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGEDCSS 483 (484)
Q Consensus 420 ---~~~l~~~~~~~~~~~-~-~~~~Cl~--~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~C~~ 483 (484)
+++|+|++|+++... . ....|++ +.+. .+.||||+.|||++|+|||++++|||||+++|+.
T Consensus 303 ~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~---~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 370 (395)
T 2qp8_A 303 QSFRITILPQQYLRPVEDVATSQDDCYKFAISQS---STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 370 (395)
T ss_dssp EEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE---SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCC
T ss_pred ceEEEEECHHHhEeecccCCCCCceEEEEEecCC---CCcEEEChHHhCCeeEEEECCCCEEEEEeccCCC
Confidence 799999999987642 1 2358974 4432 2579999999999999999999999999999974
No 31
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=1.1e-50 Score=409.23 Aligned_cols=303 Identities=21% Similarity=0.385 Sum_probs=243.8
Q ss_pred cccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCccccccc
Q 011482 120 TEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALE 197 (484)
Q Consensus 120 ~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~~ 197 (484)
..+||.+.. .+|+++|.||| |++.|+|||||+++||+|. +.|||++|+++.
T Consensus 3 ~~~~l~n~~----~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~----------~~y~~s~Ss~~~------------- 55 (340)
T 1wkr_A 3 GSVPATNQL----VDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD----------KSYVKTSTSSAT------------- 55 (340)
T ss_dssp EEEEEEECS----SCEEEEEEETTTTEEEEEEEETTCCCCEECSS----------SCCCCCTTCEEE-------------
T ss_pred ccEeeeccC----cEEEEEEEECCCCcEEEEEEeCCChhheecCC----------CccCCcCCcccc-------------
Confidence 457888753 36999999999 9999999999999999875 379998887543
Q ss_pred ccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCCCCCCcCeeeecCCCCCccc---
Q 011482 198 FATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGLFGGVSGLMGLGRSDLSLV--- 274 (484)
Q Consensus 198 ~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~~~~~~~GIlGLg~~~~Sl~--- 274 (484)
.|.|.+.|++|+ +.|.+++|+|+|++..++++.|||++...+ |...+||||||+..+++.
T Consensus 56 ---------------~~~~~i~Yg~Gs-~~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~-~~~~~GilGLg~~~~s~~~~~ 118 (340)
T 1wkr_A 56 ---------------SDKVSVTYGSGS-FSGTEYTDTVTLGSLTIPKQSIGVASRDSG-FDGVDGILGVGPVDLTVGTLS 118 (340)
T ss_dssp ---------------EEEEEEECSSCE-EEEEEEEEEEEETTEEEEEEEEEEEEEEES-CTTCSEEEECSCGGGGTTSEE
T ss_pred ---------------CceEEEEECCcE-EEEEEEEEEEEECCEEEcceEEEEEEccCC-CcCCCcEEECCcccccccccc
Confidence 269999999998 589999999999999999999999999766 557899999999887652
Q ss_pred -----------cchhhc---cCCeeEEeeCCCC-CCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEE
Q 011482 275 -----------SQTSEI---FGGLFSYCLPSTQ-DAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGI 338 (484)
Q Consensus 275 -----------~ql~~~---~~~~FS~~L~~~~-~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i 338 (484)
.++... ..++||+||.+.. +....|.|+||+ +.++|. +++.|+|+...+....+|.|. ++|
T Consensus 119 ~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~--g~l~~~p~~~~~~~~~~w~v~-~~i 195 (340)
T 1wkr_A 119 PHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYT--GSITYTPITSTSPASAYWGIN-QSI 195 (340)
T ss_dssp SCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCS--SCCEEEECCSSTTGGGSSEEE-EEE
T ss_pred ccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcc--cceEEEECccCCCCcceEEEE-eeE
Confidence 222221 1478999998631 124579999999 656665 899999998864334799999 999
Q ss_pred EEcC-EEeecCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEec
Q 011482 339 SIGG-KQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEG 417 (484)
Q Consensus 339 ~vg~-~~i~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~g 417 (484)
+|++ +.+... ..+||||||++++||+++|++|.+++.+... ...+.+.++ |.... .+|+|+|+| +
T Consensus 196 ~v~~~~~l~~~----~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~---~~~g~~~~~-C~~~~-----~~p~i~f~f-~ 261 (340)
T 1wkr_A 196 RYGSSTSILSS----TAGIVDTGTTLTLIASDAFAKYKKATGAVAD---NNTGLLRLT-TAQYA-----NLQSLFFTI-G 261 (340)
T ss_dssp EETTTEEEEEE----EEEEECTTBCSEEECHHHHHHHHHHHTCEEC---TTTSSEEEC-HHHHH-----TCCCEEEEE-T
T ss_pred EECCCeEccCC----CeEEEeCCcccccCCHHHHHHHHHhhCCEEc---CCCCeEEee-ccccc-----cCCcEEEEE-C
Confidence 9998 877543 5899999999999999999999988875432 234556776 98654 789999999 6
Q ss_pred CcEEEEccCCeEEEEecC-----CCceEE-EEEeCCC---CCCceEEchhhhcceEEEEECCCCEEEEecCCCCC
Q 011482 418 NAEMTVDVTGIVYFVKSD-----ASQVCL-ALASLSY---EDETGIIGNYQQKNQRVIYDTKNSQLGFAGEDCSS 483 (484)
Q Consensus 418 g~~~~l~~~~~~~~~~~~-----~~~~Cl-~~~~~~~---~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~C~~ 483 (484)
|++++|++++|+++.... ....|+ ++.+... .+..||||++|||++|+|||++++|||||+++|++
T Consensus 262 g~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 336 (340)
T 1wkr_A 262 GQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTT 336 (340)
T ss_dssp TEEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTT
T ss_pred CEEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCC
Confidence 799999999998764211 235686 6765331 12469999999999999999999999999999975
No 32
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=7.9e-51 Score=425.78 Aligned_cols=312 Identities=21% Similarity=0.372 Sum_probs=245.5
Q ss_pred eeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCcccccccccCCCCCCCCCCC
Q 011482 133 LNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFATGNSGVCSSSS 210 (484)
Q Consensus 133 ~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~~~~~~~~~~C~~~~ 210 (484)
.+|+++|.||| |++.|+|||||+++||+|.+| |. .++.|||++|+||+..
T Consensus 74 ~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~--~~~~y~~~~SsT~~~~------------------------ 125 (455)
T 3lpj_A 74 QGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PF--LHRYYQRQLSSTYRDL------------------------ 125 (455)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TT--CSCCCCGGGCTTCEEE------------------------
T ss_pred CEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--cc--cCCcccCCCCCCcccC------------------------
Confidence 36999999999 999999999999999999988 43 4679999999999953
Q ss_pred CCCCeeeEEcCCCceEeEEEEEEEEEecc-cccc-ceEEEEEeccCCCC---CCcCeeeecCCCCCccc--------cch
Q 011482 211 PPDCNYFVSYGDGSYTRGELGREHLGLGK-ASVN-DFIFGCGRNNKGLF---GGVSGLMGLGRSDLSLV--------SQT 277 (484)
Q Consensus 211 ~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~-~~~~-~~~fG~~~~~~~~~---~~~~GIlGLg~~~~Sl~--------~ql 277 (484)
.|.|.+.|++|+. .|.+++|+|+|++ ..+. .+.|+|+....+.| ...+||||||+..++.. .++
T Consensus 126 --~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L 202 (455)
T 3lpj_A 126 --RKGVYVPYTQGKW-EGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSL 202 (455)
T ss_dssp --EEEEEEECSSCEE-EEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred --CccEEEEeCCeEE-EEEEEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHH
Confidence 2599999999998 9999999999984 3333 36799988876644 36799999999876543 233
Q ss_pred hhc--cCCeeEEeeCCCC--------CCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcCEEee
Q 011482 278 SEI--FGGLFSYCLPSTQ--------DAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQ 346 (484)
Q Consensus 278 ~~~--~~~~FS~~L~~~~--------~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~i~ 346 (484)
... ..++||+||.+.. +....|.|+||| +..+|. +++.|+|+... .+|.|.+++|+|+++.+.
T Consensus 203 ~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~--g~l~~~p~~~~----~~w~v~l~~i~v~g~~~~ 276 (455)
T 3lpj_A 203 VKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYT--GSLWYTPIRRE----WYYEVIIVRVEINGQDLK 276 (455)
T ss_dssp HHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEE--EEEEEEECCSB----TTBBCCEEEEEETTEECC
T ss_pred HHccCCCceeEEEeccccccccccccccCCCceEEECCcCccccc--CceEEEecCCC----ceeEEEEeEEEECCEEcc
Confidence 322 2379999997530 024579999999 666775 89999999874 799999999999999865
Q ss_pred --cCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCC---CCcccccccccCCCcccccceEEEEEecCc--
Q 011482 347 --ASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAP---GFSILDTCFNLSAYQEVNIPLVKMEFEGNA-- 419 (484)
Q Consensus 347 --~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~-- 419 (484)
...+....+||||||++++||+++|++|+++|.+.....+... ..+.+ .|+.........+|+|+|+|+|+.
T Consensus 277 ~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~-~C~~~~~~~~~~~P~i~f~f~g~~~~ 355 (455)
T 3lpj_A 277 MDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQL-VCWQAGTTPWNIFPVISLYLMGEVTN 355 (455)
T ss_dssp CCGGGGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSC-EEESTTCCCGGGSCCEEEEEECSSTT
T ss_pred ccccccCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcce-ecccccCCchhcCCcEEEEEcCCCcC
Confidence 3233346899999999999999999999999998754211111 12245 499876444446999999997643
Q ss_pred ---EEEEccCCeEEEEecCC--CceEEEEEeCCCCCCceEEchhhhcceEEEEECCCCEEEEecCCCCC
Q 011482 420 ---EMTVDVTGIVYFVKSDA--SQVCLALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGEDCSS 483 (484)
Q Consensus 420 ---~~~l~~~~~~~~~~~~~--~~~Cl~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~C~~ 483 (484)
+++|++++|+++....+ ...|++|.... ..+.||||++|||++|+|||++++|||||+++|+.
T Consensus 356 ~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~-~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 423 (455)
T 3lpj_A 356 QSFRITILPQQYLRPVEDVATSQDDCYKFAISQ-SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 423 (455)
T ss_dssp EEEEEEECHHHHEEEECCTTCCSCEEEEECEEE-ESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCC
T ss_pred ceEEEEECHHHheEeccCCCCCCceEEEEeccC-CCCcEEEChHHhCCeEEEEECCCCEEEEEeccccc
Confidence 59999999999875322 25899743221 13679999999999999999999999999999965
No 33
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=2.4e-50 Score=415.98 Aligned_cols=312 Identities=21% Similarity=0.392 Sum_probs=241.8
Q ss_pred eeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCcccccccccCCCCCCCCCCC
Q 011482 133 LNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFATGNSGVCSSSS 210 (484)
Q Consensus 133 ~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~~~~~~~~~~C~~~~ 210 (484)
.+|+++|.||| |++.|+|||||+++||+|.+| | +.++.|||++|+||+..
T Consensus 28 ~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~--~~~~~y~~~~SsT~~~~------------------------ 79 (402)
T 3vf3_A 28 QGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--P--FLHRYYQRQLSSTYRDL------------------------ 79 (402)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--T--TCSCCCCGGGCTTCEEE------------------------
T ss_pred CEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--C--cccCCcCcccCcccccC------------------------
Confidence 36999999999 999999999999999999988 4 23679999999999953
Q ss_pred CCCCeeeEEcCCCceEeEEEEEEEEEec-ccccc-ceEEEEEeccCCCC---CCcCeeeecCCCCCccc--------cch
Q 011482 211 PPDCNYFVSYGDGSYTRGELGREHLGLG-KASVN-DFIFGCGRNNKGLF---GGVSGLMGLGRSDLSLV--------SQT 277 (484)
Q Consensus 211 ~~~C~~~~~Ygdgs~~~G~~~~Dtltlg-~~~~~-~~~fG~~~~~~~~~---~~~~GIlGLg~~~~Sl~--------~ql 277 (484)
.|.|.+.|++|+. .|.+++|+|+|+ +..++ .+.|+|.....+.+ ...+||||||+..++.. .++
T Consensus 80 --~~~~~i~Yg~Gs~-~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L 156 (402)
T 3vf3_A 80 --RKGVYVPYTQGKW-EGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSL 156 (402)
T ss_dssp --EEEEEEECSSCEE-EEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred --CCEEEEEECcEEE-EEEEEEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHH
Confidence 2599999999997 999999999998 44444 34588888776644 36799999999876543 233
Q ss_pred hhc--cCCeeEEeeCCCC---C-----CCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcCEEee
Q 011482 278 SEI--FGGLFSYCLPSTQ---D-----AGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQ 346 (484)
Q Consensus 278 ~~~--~~~~FS~~L~~~~---~-----~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~i~ 346 (484)
... ..++||+||.+.. + ....|.|+||| +..+|. +++.|+|+... .+|.|.+++|+|+++.+.
T Consensus 157 ~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~--g~l~~~p~~~~----~~w~v~l~~i~v~g~~~~ 230 (402)
T 3vf3_A 157 VKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYT--GSLWYTPIRRE----WYYEVIIVRVEINGQDLK 230 (402)
T ss_dssp HHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEE--EEEEEEECSSB----TTBEECEEEEEETTEECC
T ss_pred HHccCCccceEEEeecccccccccccccCCCCEEEeCCcCccccc--CceEEEeCCcC----cEEEEEEeEEEECCEEec
Confidence 332 2378999997420 1 34579999999 666675 89999999874 799999999999999865
Q ss_pred c--CCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcCCCCCCCC---cccccccccCCCcccccceEEEEEecCc--
Q 011482 347 A--SGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGF---SILDTCFNLSAYQEVNIPLVKMEFEGNA-- 419 (484)
Q Consensus 347 ~--~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~C~~~~~~~~~~~P~i~~~f~gg~-- 419 (484)
. ..+....+||||||++++||++++++|.++|.+.....+...+. +.+ .|+.........+|+|+|+|.|+.
T Consensus 231 ~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~-~C~~~~~~~~~~~P~i~f~f~g~~~~ 309 (402)
T 3vf3_A 231 MDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQL-VCWQAGTTPWNIFPVISLYLMGEVTN 309 (402)
T ss_dssp CCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSC-EEEETTCCCGGGSCCEEEEEECSSTT
T ss_pred ccccccCCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccc-cccccccchHhhCCceEEEEecCCCC
Confidence 2 22334689999999999999999999999999885321112222 245 499876544457999999997643
Q ss_pred ---EEEEccCCeEEEEecCC--CceEEEEEeCCCCCCceEEchhhhcceEEEEECCCCEEEEecCCCCC
Q 011482 420 ---EMTVDVTGIVYFVKSDA--SQVCLALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGEDCSS 483 (484)
Q Consensus 420 ---~~~l~~~~~~~~~~~~~--~~~Cl~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~C~~ 483 (484)
+++|++++|+++....+ ...|++|.... ..+.||||++|||++|+|||++++|||||+++|++
T Consensus 310 ~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~-~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 377 (402)
T 3vf3_A 310 QSFRITILPQQYLRPVEDVATSQDDCYKFAISQ-SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 377 (402)
T ss_dssp EEEEEEECHHHHEEECCCGGGTTEEEEEECEEE-ESSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCC
T ss_pred ceEEEEECHHHheehhccCCCCCceEEEEeccC-CCCcEEEChHHhCCeEEEEECCCCEEEEEecccCc
Confidence 59999999998753221 14898642221 13579999999999999999999999999999985
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.3e-39 Score=312.00 Aligned_cols=222 Identities=24% Similarity=0.421 Sum_probs=182.3
Q ss_pred cccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCC---CCCCCCCCCCCCCCCCCcceecCCCcccc
Q 011482 120 TEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCK---SCYNQQDPVFDPSISPSYKKVLCNSSTCH 194 (484)
Q Consensus 120 ~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~---~C~~~~~~~ydps~Sst~~~v~C~s~~C~ 194 (484)
..+||.+.. +++|+++|.||| |++.|+|||||+++||+|.+|. .|.. ++.|||++|+||+..
T Consensus 3 ~~~~l~n~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~--~~~y~~~~SsT~~~~-------- 69 (239)
T 1b5f_A 3 AVVALTNDR---DTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRA--HSMYESSDSSTYKEN-------- 69 (239)
T ss_dssp EEEEEEEET---TTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHT--SCCBCGGGCTTCEEE--------
T ss_pred ceeeeeecC---CCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCC--CCCCCCccCCCeeeC--------
Confidence 357787754 356999999999 9999999999999999999996 5765 469999999999853
Q ss_pred cccccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEeccccccceEEEEEeccCC-CC--CCcCeeeecCCCCC
Q 011482 195 ALEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKG-LF--GGVSGLMGLGRSDL 271 (484)
Q Consensus 195 ~~~~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~-~~--~~~~GIlGLg~~~~ 271 (484)
.|.|.+.|++|+. .|.+++|+|++++..++++.|||++...+ .| ...+||||||+..+
T Consensus 70 ------------------~~~~~i~Yg~Gs~-~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~ 130 (239)
T 1b5f_A 70 ------------------GTFGAIIYGTGSI-TGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTI 130 (239)
T ss_dssp ------------------EEEEEEECSSCEE-EEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSS
T ss_pred ------------------CcEEEEEECCCcE-EEEEEEEEEEECCcEEccEEEEEEEeccCccccccCcceEEecCcccc
Confidence 2589999999985 89999999999999999999999998765 22 46899999999988
Q ss_pred ccc--cchhh---ccCCeeEEeeCCCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcCEEe
Q 011482 272 SLV--SQTSE---IFGGLFSYCLPSTQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQL 345 (484)
Q Consensus 272 Sl~--~ql~~---~~~~~FS~~L~~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~i 345 (484)
+.+ .++.. ...++||+||.+..+....|.|+||+ +.++|. +++.|+|+... .+|.|.|++|+|+++.+
T Consensus 131 s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~--g~l~~~p~~~~----~~~~v~l~~i~v~~~~~ 204 (239)
T 1b5f_A 131 SVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFR--GDHTYVPVTYQ----YYWQFGIGDVLIGDKST 204 (239)
T ss_dssp SCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEE--EEEEEEEEEEE----TTEEEEECCEEETTEEC
T ss_pred ccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhcc--CceEEEEcccC----CeEEEEeeEEEECCEEe
Confidence 732 22322 12579999998752234689999999 656665 89999999864 69999999999999886
Q ss_pred ecCCCCCCcEEEcccccccccCHHHHHHHHHHHHH
Q 011482 346 QASGFAKGGILIDSGTVITRLPPSIYSALKAEFLK 380 (484)
Q Consensus 346 ~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~ 380 (484)
.... ....+||||||++++||+++|++|.++|.+
T Consensus 205 ~~~~-~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 205 GFCA-PGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp CTTT-TCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred cccC-CCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 4211 136899999999999999999999988753
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.1e-36 Score=292.10 Aligned_cols=224 Identities=20% Similarity=0.393 Sum_probs=178.9
Q ss_pred ccccccceEEEEEeccCC-CC--CCcCeeeecCCCCCcc------ccchhhc---cCCeeEEeeCCCCCCCCcceEEecC
Q 011482 238 GKASVNDFIFGCGRNNKG-LF--GGVSGLMGLGRSDLSL------VSQTSEI---FGGLFSYCLPSTQDAGASGSLILGG 305 (484)
Q Consensus 238 g~~~~~~~~fG~~~~~~~-~~--~~~~GIlGLg~~~~Sl------~~ql~~~---~~~~FS~~L~~~~~~~~~G~L~fGg 305 (484)
|+.+++++.|||++...+ .| ...+||||||+..++. ..|+... ..++||+||.+..+....|.|+||+
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CCeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 466789999999999876 34 3689999999987653 3344332 2589999999752223489999999
Q ss_pred -CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcCEEeecCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcC
Q 011482 306 -NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSG 384 (484)
Q Consensus 306 -~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~i~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~ 384 (484)
+.++|. +++.|+|+... .+|.|.+++|+|+++.+... ....+||||||++++||++++++|.+++.+...
T Consensus 81 ~d~~~~~--g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~--~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~- 151 (241)
T 1lya_B 81 TDSKYYK--GSLSYLNVTRK----AYWQVHLDQVEVASGLTLCK--EGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPL- 151 (241)
T ss_dssp CCGGGEE--EEEEEEECSSB----TTBEEEEEEEEETTSCEEST--TCEEEEECTTCSSEEECHHHHHHHHHHHTCEEE-
T ss_pred cCHHHcC--CceEEEECccc----cEEEEEEeEEEECCeeEecc--CCCEEEEECCCccccCCHHHHHHHHHHhCCeec-
Confidence 666775 89999999864 79999999999999874322 136899999999999999999999999865422
Q ss_pred CCCCCCCcccccccccCCCcccccceEEEEEecCcEEEEccCCeEEEEecCCCceEE-EEEeCCC---CCCceEEchhhh
Q 011482 385 FPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKSDASQVCL-ALASLSY---EDETGIIGNYQQ 460 (484)
Q Consensus 385 ~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~~~~~~Cl-~~~~~~~---~~~~~IlG~~fl 460 (484)
..+.+.++ |+... .+|+|+|+| ||++++|++++|+++....++..|+ +|.+.+. ..+.||||++||
T Consensus 152 ---~~g~~~~~-C~~~~-----~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl 221 (241)
T 1lya_B 152 ---IQGEYMIP-CEKVS-----TLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFI 221 (241)
T ss_dssp ---ETTEEEEE-GGGGG-----GSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHHH
T ss_pred ---cCCcEEEE-CCCCc-----cCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHHh
Confidence 23556776 99765 789999999 7899999999999887433356899 5876531 246899999999
Q ss_pred cceEEEEECCCCEEEEecCC
Q 011482 461 KNQRVIYDTKNSQLGFAGED 480 (484)
Q Consensus 461 ~~~~vvfD~~~~~IGFa~~~ 480 (484)
|++|+|||.+++|||||+++
T Consensus 222 ~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 222 GRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp TTEEEEEETTTTEEEEEEEC
T ss_pred cceEEEEECCCCEEEEEEcC
Confidence 99999999999999999864
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.80 E-value=4.4e-20 Score=150.47 Aligned_cols=87 Identities=28% Similarity=0.520 Sum_probs=75.8
Q ss_pred ccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCC----CCCCCCCCCCCCCCCCCcceecCCCcccc
Q 011482 121 EIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCK----SCYNQQDPVFDPSISPSYKKVLCNSSTCH 194 (484)
Q Consensus 121 ~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~----~C~~~~~~~ydps~Sst~~~v~C~s~~C~ 194 (484)
.+||.+.. +.+|+++|.||| |++.|+|||||+++||+|.+|. .|.. ++.|||++|+||+..
T Consensus 4 ~~~l~n~~---~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~--~~~y~p~~SsT~~~~-------- 70 (97)
T 1lya_A 4 PEVLKNYM---DAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWI--HHKYNSDKSSTYVKN-------- 70 (97)
T ss_dssp EEEEEEET---TTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHT--SCCBCGGGCTTCEEE--------
T ss_pred eEeeEECC---CCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCC--CCCCCchhCCCceeC--------
Confidence 46777643 346999999999 9999999999999999999996 6865 579999999999953
Q ss_pred cccccCCCCCCCCCCCCCCCeeeEEcCCCceEeEEEEEEEEEecc
Q 011482 195 ALEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGK 239 (484)
Q Consensus 195 ~~~~~~~~~~~C~~~~~~~C~~~~~Ygdgs~~~G~~~~Dtltlg~ 239 (484)
.|.|.+.|++|+ +.|.+++|+|+|++
T Consensus 71 ------------------~~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 71 ------------------GTSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp ------------------EEEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred ------------------CCcEEEEECCcE-EEEEEEEEEEEECC
Confidence 269999999999 58999999999975
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.71 E-value=1.8e-17 Score=132.45 Aligned_cols=84 Identities=19% Similarity=0.346 Sum_probs=69.3
Q ss_pred CCcccccccccCCCcccccceEEEEEecCcEEEEccCCeEEEEecCCCceEE-EEEeCC--CCCCceEEchhhhcceEEE
Q 011482 390 GFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKSDASQVCL-ALASLS--YEDETGIIGNYQQKNQRVI 466 (484)
Q Consensus 390 ~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~~~~~~Cl-~~~~~~--~~~~~~IlG~~fl~~~~vv 466 (484)
+.|.++ |...+ .+|+|+|+| ||++++|+|++|+++....+...|+ +|.+.+ ...+.||||++|||++|+|
T Consensus 1 G~y~v~-C~~~~-----~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~v 73 (87)
T 1b5f_B 1 EELQVD-CNTLS-----SMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTV 73 (87)
T ss_dssp CCCEEC-GGGGG-----GCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEE
T ss_pred CcEEEE-CCCCC-----cCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEE
Confidence 346777 98765 799999999 7899999999999886433346899 677653 2246899999999999999
Q ss_pred EECCCCEEEEecCC
Q 011482 467 YDTKNSQLGFAGED 480 (484)
Q Consensus 467 fD~~~~~IGFa~~~ 480 (484)
||.+++|||||+++
T Consensus 74 fD~~~~riGfA~~~ 87 (87)
T 1b5f_B 74 FDYGNLLVGFAEAA 87 (87)
T ss_dssp EETTTTEEEEEEEC
T ss_pred EECCCCEEEEEEcC
Confidence 99999999999864
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=89.85 E-value=0.77 Score=39.05 Aligned_cols=107 Identities=17% Similarity=0.208 Sum_probs=59.7
Q ss_pred eEEEEEeEEEEcCEEeecCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhc-CCC-CCCCCcccccccccCCCcccc
Q 011482 330 FYILNLTGISIGGKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFS-GFP-SAPGFSILDTCFNLSAYQEVN 407 (484)
Q Consensus 330 ~y~v~l~~i~vg~~~i~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~-~~~-~~~~~~~~~~C~~~~~~~~~~ 407 (484)
.++|. +.|+|+. ..+++|||.+.+.++++..+.+- +..... ... ...+..... +.. .
T Consensus 26 ~~~v~---v~InG~~--------~~~LvDTGAs~s~is~~~a~~lg--l~~~~~~~~~~~a~g~g~~~-~~~-------~ 84 (148)
T 2i1a_A 26 MLYIN---IEINNYP--------VKAFVDTGAQTTIMSTRLAKKTG--LSRMIDKRFIGEARGVGTGK-IIG-------R 84 (148)
T ss_dssp CCEEE---EEETTEE--------EEEEECTTCSSCEEEHHHHHHHT--GGGGCBCCCC------------CE-------E
T ss_pred eEEEE---EEECCEE--------EEEEEECCCCccccCHHHHHHcC--CCccCCcceEEEEecCCCcc-ccc-------E
Confidence 34454 6788874 36799999999999988877652 111100 000 001111100 100 1
Q ss_pred cceEEEEEecCcEEEEccCCeEEEEecCCCceEEEEEeCCCCCCceEEchhhhcceEEEEECCCCEEEEe
Q 011482 408 IPLVKMEFEGNAEMTVDVTGIVYFVKSDASQVCLALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFA 477 (484)
Q Consensus 408 ~P~i~~~f~gg~~~~l~~~~~~~~~~~~~~~~Cl~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa 477 (484)
.....+.+ |+..+.++ + .+.+ . .-..|||..||+.+-+..|+.+++|-|.
T Consensus 85 ~~~~~i~i-g~~~~~~~---~-------------~vl~-~--~~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 85 IHQAQVKI-ETQYIPCS---F-------------TVLD-T--DIDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp EEEEEEEE-TTEEEEEE---E-------------EEEC-S--SCSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred EEEEEEEE-CCEEecee---E-------------EEec-C--CCCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 22335555 54443211 1 1122 1 1348999999999999999999999885
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=89.57 E-value=0.42 Score=40.99 Aligned_cols=109 Identities=14% Similarity=0.251 Sum_probs=62.1
Q ss_pred eEEEEEeEEEEcCEEeecCCCCCCcEEEcccccccccCHHHHHHHHHHHHHhhcC-CC-CCCCCcccccccccCCCcccc
Q 011482 330 FYILNLTGISIGGKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSG-FP-SAPGFSILDTCFNLSAYQEVN 407 (484)
Q Consensus 330 ~y~v~l~~i~vg~~~i~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~~-~~-~~~~~~~~~~C~~~~~~~~~~ 407 (484)
.++|+ +.|+|+.+ .+++|||.+.+.++.+..+.+- +...... +. ...+..... +.. .
T Consensus 24 ~l~v~---~~Ing~~v--------~~LVDTGAs~s~Is~~~A~rlG--L~~~~~~~~~~~a~g~G~~~-~~g-------~ 82 (148)
T 3s8i_A 24 MLYIN---CKVNGHPL--------KAFVDSGAQMTIMSQACAERCN--IMRLVDRRWAGVAKGVGTQR-IIG-------R 82 (148)
T ss_dssp CCEEE---EEETTEEE--------EEEECTTCSSCEEEHHHHHHTT--CGGGEEGGGCEECCC---CE-EEE-------E
T ss_pred EEEEE---EEECCEEE--------EEEEeCCCCcEeeCHHHHHHcC--CccccCcceeEEEEcCCccE-EEE-------E
Confidence 45555 44788753 6799999999999998888762 1110000 00 000000000 110 2
Q ss_pred cceEEEEEecCcEEEEccCCeEEEEecCCCceEE-EEEeCCCCCCceEEchhhhcceEEEEECCCCEEEEecC
Q 011482 408 IPLVKMEFEGNAEMTVDVTGIVYFVKSDASQVCL-ALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGE 479 (484)
Q Consensus 408 ~P~i~~~f~gg~~~~l~~~~~~~~~~~~~~~~Cl-~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~ 479 (484)
.+...+.+ |+..+. |- .+.+.. .-..|||..||+.+-.+.|+++++|-|...
T Consensus 83 v~~~~I~I-g~~~~~-----------------~~~~Vle~~--~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 83 VHLAQIQI-EGDFLQ-----------------CSFSILEDQ--PMDMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp EEEEEEEE-TTEEEE-----------------EEEEEETTC--SSSEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred EEEEEEEE-CCEEEE-----------------EEEEEeCCC--CcCeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 33444555 333221 32 223222 235799999999999999999999988653
No 40
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=86.49 E-value=0.72 Score=36.95 Aligned_cols=26 Identities=19% Similarity=0.374 Sum_probs=24.0
Q ss_pred EEEEEEEcCEEEEEEEEcCCCceeEe
Q 011482 135 YIATIELGGRNMTVIVDTGSDLTWVQ 160 (484)
Q Consensus 135 Y~~~v~iGtq~~~vivDTGS~~~Wv~ 160 (484)
=+++|.||.|.+.+++|||.|++-+.
T Consensus 9 P~v~v~I~Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 9 PTTIVLINDTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CEEEEEETTEEEEEEECTTCSSCEEE
T ss_pred CEEEEEECCEEEEEEeccCCCcEEEc
Confidence 35889999999999999999999987
No 41
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=85.84 E-value=0.82 Score=36.22 Aligned_cols=27 Identities=33% Similarity=0.561 Sum_probs=24.3
Q ss_pred EEEEEEcCEEEEEEEEcCCCceeEecC
Q 011482 136 IATIELGGRNMTVIVDTGSDLTWVQCQ 162 (484)
Q Consensus 136 ~~~v~iGtq~~~vivDTGS~~~Wv~~~ 162 (484)
+++|.||.|.+.+++|||.|++-+.-.
T Consensus 10 ~vtvkI~Gq~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIGGQLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEETTEEEEEEECTTCSSEEESCC
T ss_pred EEEEEECCEEEEEEeccCCCcEEEecc
Confidence 578999999999999999999998754
No 42
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=82.23 E-value=1.4 Score=34.87 Aligned_cols=27 Identities=30% Similarity=0.439 Sum_probs=24.1
Q ss_pred EEEEEEcCEEEEEEEEcCCCceeEecC
Q 011482 136 IATIELGGRNMTVIVDTGSDLTWVQCQ 162 (484)
Q Consensus 136 ~~~v~iGtq~~~vivDTGS~~~Wv~~~ 162 (484)
++++.||.|.+.+++|||.|++-+...
T Consensus 10 ~vti~I~Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIEGQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEETTEEEEEEECTTCSSCEESSC
T ss_pred eEEEEECCEEEEEEEecCCCceEEcCc
Confidence 578999999999999999999998644
No 43
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=80.90 E-value=1.4 Score=37.42 Aligned_cols=29 Identities=24% Similarity=0.297 Sum_probs=26.1
Q ss_pred eeEEEEEEEcCEEEEEEEEcCCCceeEec
Q 011482 133 LNYIATIELGGRNMTVIVDTGSDLTWVQC 161 (484)
Q Consensus 133 ~~Y~~~v~iGtq~~~vivDTGS~~~Wv~~ 161 (484)
+.|++++.|+.+++.+++|||++.+-+.-
T Consensus 25 ~~~~v~v~InG~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 25 PMLYINIEINNYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCEEEEEETTEEEEEEECTTCSSCEEEH
T ss_pred ceEEEEEEECCEEEEEEEECCCCccccCH
Confidence 46999999999999999999999988864
No 44
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=78.69 E-value=2 Score=35.05 Aligned_cols=26 Identities=31% Similarity=0.519 Sum_probs=23.0
Q ss_pred EEEEEEcCEEEEEEEEcCCCceeEecC
Q 011482 136 IATIELGGRNMTVIVDTGSDLTWVQCQ 162 (484)
Q Consensus 136 ~~~v~iGtq~~~vivDTGS~~~Wv~~~ 162 (484)
++ |.||.|.+.+++|||.|++-+.-.
T Consensus 16 ~v-ikI~Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 16 IL-IFVNGYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EE-EEETTEEEEEEECTTCSSCEEEGG
T ss_pred EE-EEECCEEEEEEecCCCCcEEEccc
Confidence 35 999999999999999999988743
No 45
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=74.69 E-value=3.3 Score=33.52 Aligned_cols=28 Identities=25% Similarity=0.395 Sum_probs=25.0
Q ss_pred EEEEEEcCEEEEEEEEcCCCceeEecCC
Q 011482 136 IATIELGGRNMTVIVDTGSDLTWVQCQP 163 (484)
Q Consensus 136 ~~~v~iGtq~~~vivDTGS~~~Wv~~~~ 163 (484)
.+++.||.|.+.+++|||-|++-+.-..
T Consensus 11 ~vti~I~Gq~~eaLLDTGADdTVi~~~~ 38 (114)
T 3sqf_A 11 SLTLWLDDKMFTGLINTGADVTIIKLED 38 (114)
T ss_dssp EEEEEETTEEEEEEECTTCSSCEEEGGG
T ss_pred eEEEEECCEEEEEEEccCCCceEEeccc
Confidence 5789999999999999999999998654
No 46
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=71.92 E-value=3.3 Score=35.25 Aligned_cols=29 Identities=17% Similarity=0.350 Sum_probs=26.2
Q ss_pred eEEEEEEEcCEEEEEEEEcCCCceeEecC
Q 011482 134 NYIATIELGGRNMTVIVDTGSDLTWVQCQ 162 (484)
Q Consensus 134 ~Y~~~v~iGtq~~~vivDTGS~~~Wv~~~ 162 (484)
.|++++.|+.+++.++||||++.+.+.-.
T Consensus 24 ~l~v~~~Ing~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 24 MLYINCKVNGHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCEEEEEETTEEEEEEECTTCSSCEEEHH
T ss_pred EEEEEEEECCEEEEEEEeCCCCcEeeCHH
Confidence 48999999999999999999999988654
No 47
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=61.05 E-value=8.2 Score=32.13 Aligned_cols=28 Identities=29% Similarity=0.466 Sum_probs=24.6
Q ss_pred EEEEEEEcCEEEEEEEEcCCCceeEecC
Q 011482 135 YIATIELGGRNMTVIVDTGSDLTWVQCQ 162 (484)
Q Consensus 135 Y~~~v~iGtq~~~vivDTGS~~~Wv~~~ 162 (484)
-++.+.|+.|.+.+++|||.+.+-+.-.
T Consensus 23 P~v~i~I~G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 23 PRITLKVGGQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SEEEEEETTEEEEEEECTTCSSCEECSC
T ss_pred CEEEEEECCEEEEEEEeCCCCeEEEccc
Confidence 4688999999999999999999988644
No 48
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=58.06 E-value=9.1 Score=34.30 Aligned_cols=27 Identities=33% Similarity=0.516 Sum_probs=24.4
Q ss_pred EEEEEEEcCEEEEEEEEcCCCceeEec
Q 011482 135 YIATIELGGRNMTVIVDTGSDLTWVQC 161 (484)
Q Consensus 135 Y~~~v~iGtq~~~vivDTGS~~~Wv~~ 161 (484)
-.++|.||.|.+.+++|||.|++-+..
T Consensus 9 P~vtv~I~Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 9 PLVTIRIGGQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp CEEEEEETTEEEEEEECTTCSSCEECS
T ss_pred CeEEEEECCEEEEEEEecCCCceEEec
Confidence 468899999999999999999998863
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=57.68 E-value=8 Score=31.81 Aligned_cols=23 Identities=22% Similarity=0.400 Sum_probs=20.3
Q ss_pred EcCEEEEEEEEcCCCceeEecCC
Q 011482 141 LGGRNMTVIVDTGSDLTWVQCQP 163 (484)
Q Consensus 141 iGtq~~~vivDTGS~~~Wv~~~~ 163 (484)
||.|.+.+++|||-|++-+.-..
T Consensus 27 i~gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 27 QRSVYITALLDSGADITIISEED 49 (124)
T ss_dssp CSEEEEEEEECTTCSSCEEETTT
T ss_pred CCCEEEEEEecCCCCcEEEeccc
Confidence 88899999999999999988543
No 50
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=57.56 E-value=11 Score=30.32 Aligned_cols=29 Identities=17% Similarity=0.400 Sum_probs=24.8
Q ss_pred EEEEEEc-----CEEEEEEEEcCCCceeEecCCC
Q 011482 136 IATIELG-----GRNMTVIVDTGSDLTWVQCQPC 164 (484)
Q Consensus 136 ~~~v~iG-----tq~~~vivDTGS~~~Wv~~~~C 164 (484)
.++|.|| .|.+..++|||-|++-+.-..+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 5788888 5999999999999999986644
No 51
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=37.16 E-value=31 Score=30.84 Aligned_cols=26 Identities=35% Similarity=0.575 Sum_probs=23.7
Q ss_pred EEEEEEcCEEEEEEEEcCCCceeEec
Q 011482 136 IATIELGGRNMTVIVDTGSDLTWVQC 161 (484)
Q Consensus 136 ~~~v~iGtq~~~vivDTGS~~~Wv~~ 161 (484)
.+++.||.|.+.+++|||.|++-+..
T Consensus 114 ~~~iki~Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 114 LVTIRIGGQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp EEEEEETTEEEEEEECTTCSSCEECS
T ss_pred cEEEEECCEEEeeeecccCCceeeec
Confidence 58899999999999999999998853
No 52
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=21.29 E-value=67 Score=29.02 Aligned_cols=29 Identities=14% Similarity=0.244 Sum_probs=22.5
Q ss_pred eEEEE---EEEcCEE-------EEEEEEcCCCceeEecC
Q 011482 134 NYIAT---IELGGRN-------MTVIVDTGSDLTWVQCQ 162 (484)
Q Consensus 134 ~Y~~~---v~iGtq~-------~~vivDTGS~~~Wv~~~ 162 (484)
.|.++ |.||.+. ..++||||+++++++..
T Consensus 189 ~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 189 YWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp TEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred eEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 57665 6788733 57999999999998753
Done!