Query 011490
Match_columns 484
No_of_seqs 144 out of 1416
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 09:13:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011490.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011490hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 4.4E-68 1.5E-72 530.7 36.0 428 8-480 13-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 2.4E-62 8.2E-67 497.6 43.5 439 8-482 6-470 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 4.5E-63 1.5E-67 504.6 36.8 451 1-481 1-479 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 4.1E-61 1.4E-65 485.4 35.8 436 1-481 1-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 6.8E-61 2.3E-65 485.2 35.8 434 8-480 9-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 3.3E-45 1.1E-49 368.4 34.4 388 1-460 1-405 (424)
7 4amg_A Snogd; transferase, pol 100.0 6.5E-44 2.2E-48 356.2 27.4 362 8-482 22-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 1.2E-41 4E-46 341.4 27.1 356 9-459 1-383 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 7.9E-40 2.7E-44 328.3 31.6 366 8-460 20-397 (415)
10 1rrv_A Glycosyltransferase GTF 100.0 1.7E-40 5.9E-45 333.1 24.6 355 9-459 1-384 (416)
11 3ia7_A CALG4; glycosysltransfe 100.0 7.1E-39 2.4E-43 319.8 33.7 378 9-479 5-397 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 6.6E-40 2.3E-44 327.2 24.8 352 9-459 1-366 (404)
13 2iyf_A OLED, oleandomycin glyc 100.0 5.9E-39 2E-43 323.4 31.7 373 1-461 1-384 (430)
14 2yjn_A ERYCIII, glycosyltransf 100.0 2.7E-38 9.1E-43 319.5 22.6 363 8-459 20-418 (441)
15 2p6p_A Glycosyl transferase; X 100.0 2.2E-37 7.5E-42 307.2 28.3 346 9-461 1-364 (384)
16 4fzr_A SSFS6; structural genom 100.0 8.4E-36 2.9E-40 297.3 22.0 348 8-459 15-383 (398)
17 3tsa_A SPNG, NDP-rhamnosyltran 100.0 5.3E-34 1.8E-38 283.6 27.7 347 8-459 1-371 (391)
18 3oti_A CALG3; calicheamicin, T 100.0 3.2E-34 1.1E-38 285.9 26.0 342 8-459 20-380 (398)
19 3otg_A CALG1; calicheamicin, T 100.0 1.8E-31 6E-36 267.2 32.4 350 8-459 20-391 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 7.6E-32 2.6E-36 264.7 25.5 340 9-484 3-356 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 1.2E-26 4E-31 202.5 13.3 161 266-459 8-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 9E-21 3.1E-25 186.0 21.9 343 9-482 7-357 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 6.7E-15 2.3E-19 137.1 14.6 118 278-410 156-275 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 2.1E-15 7.3E-20 134.7 9.1 120 277-407 26-184 (224)
25 3okp_A GDP-mannose-dependent a 99.4 6.7E-11 2.3E-15 116.6 26.1 345 8-481 4-378 (394)
26 1v4v_A UDP-N-acetylglucosamine 99.4 1.9E-12 6.4E-17 127.2 14.0 130 279-442 198-336 (376)
27 3c48_A Predicted glycosyltrans 99.4 2.7E-10 9.2E-15 114.1 28.3 99 339-459 305-410 (438)
28 2gek_A Phosphatidylinositol ma 99.3 8.1E-11 2.8E-15 116.5 21.9 321 8-455 20-364 (406)
29 3fro_A GLGA glycogen synthase; 99.3 1E-09 3.6E-14 109.5 29.2 165 281-482 252-430 (439)
30 2r60_A Glycosyl transferase, g 99.3 3.5E-10 1.2E-14 115.4 26.0 151 281-457 263-441 (499)
31 1vgv_A UDP-N-acetylglucosamine 99.3 1.1E-11 3.8E-16 121.9 13.1 140 278-450 204-352 (384)
32 2jjm_A Glycosyl transferase, g 99.2 4.2E-09 1.4E-13 103.8 26.3 330 8-455 15-365 (394)
33 3dzc_A UDP-N-acetylglucosamine 99.2 1.1E-10 3.9E-15 115.1 12.8 326 8-442 25-369 (396)
34 3ot5_A UDP-N-acetylglucosamine 99.2 1.2E-10 4.3E-15 115.0 11.6 319 8-442 27-363 (403)
35 2iw1_A Lipopolysaccharide core 99.1 2.2E-08 7.5E-13 97.7 27.2 148 281-457 197-354 (374)
36 2x6q_A Trehalose-synthase TRET 99.1 8E-09 2.7E-13 102.6 24.2 112 339-481 292-413 (416)
37 3beo_A UDP-N-acetylglucosamine 99.1 1.5E-09 5.2E-14 106.2 18.3 136 279-447 205-349 (375)
38 4hwg_A UDP-N-acetylglucosamine 99.0 4.6E-09 1.6E-13 102.9 14.4 319 9-444 10-346 (385)
39 2iuy_A Avigt4, glycosyltransfe 99.0 2.5E-08 8.7E-13 96.2 19.0 125 282-439 164-307 (342)
40 3s28_A Sucrose synthase 1; gly 98.8 1.1E-06 3.9E-11 93.3 25.7 148 281-455 573-749 (816)
41 1rzu_A Glycogen synthase 1; gl 98.7 1.6E-06 5.6E-11 87.7 23.1 159 281-481 292-474 (485)
42 2qzs_A Glycogen synthase; glyc 98.7 3E-06 1E-10 85.7 23.3 159 281-481 293-475 (485)
43 2vsy_A XCC0866; transferase, g 98.7 3.6E-05 1.2E-09 79.4 31.7 97 340-455 434-537 (568)
44 3oy2_A Glycosyltransferase B73 98.6 2.8E-06 9.5E-11 84.0 20.8 167 280-481 184-389 (413)
45 2f9f_A First mannosyl transfer 98.6 4.2E-07 1.4E-11 78.7 11.6 139 282-451 25-174 (177)
46 2xci_A KDO-transferase, 3-deox 98.5 1.3E-05 4.5E-10 78.1 22.4 98 341-459 261-364 (374)
47 2hy7_A Glucuronosyltransferase 98.2 0.00016 5.5E-09 71.2 21.3 76 339-442 264-354 (406)
48 3qhp_A Type 1 capsular polysac 97.9 8.4E-05 2.9E-09 63.0 11.4 146 280-458 2-158 (166)
49 3q3e_A HMW1C-like glycosyltran 97.7 0.00047 1.6E-08 70.2 13.9 153 280-454 441-602 (631)
50 3vue_A GBSS-I, granule-bound s 97.6 0.031 1.1E-06 56.8 26.4 137 281-439 328-476 (536)
51 2bfw_A GLGA glycogen synthase; 97.5 0.001 3.6E-08 58.0 12.2 93 341-456 96-197 (200)
52 4gyw_A UDP-N-acetylglucosamine 97.4 0.0025 8.6E-08 67.3 15.7 151 278-451 521-679 (723)
53 1psw_A ADP-heptose LPS heptosy 97.3 0.0044 1.5E-07 59.3 15.2 103 9-145 1-106 (348)
54 3tov_A Glycosyl transferase fa 97.3 0.003 1E-07 60.6 13.5 104 8-145 8-115 (349)
55 3rhz_A GTF3, nucleotide sugar 96.9 0.0025 8.5E-08 60.8 8.5 111 341-479 215-337 (339)
56 2gt1_A Lipopolysaccharide hept 95.0 2.2 7.5E-05 39.8 19.1 45 9-53 1-47 (326)
57 2x0d_A WSAF; GT4 family, trans 94.8 0.079 2.7E-06 51.9 8.7 81 339-442 294-381 (413)
58 1g5t_A COB(I)alamin adenosyltr 87.1 7.6 0.00026 33.2 11.4 37 8-44 28-64 (196)
59 3nb0_A Glycogen [starch] synth 86.8 1.6 5.4E-05 45.0 8.0 44 342-387 495-551 (725)
60 3t5t_A Putative glycosyltransf 84.7 13 0.00045 36.8 13.4 109 341-481 353-472 (496)
61 3zqu_A Probable aromatic acid 84.2 1.3 4.5E-05 38.4 5.2 45 8-53 4-48 (209)
62 2x0d_A WSAF; GT4 family, trans 81.8 0.61 2.1E-05 45.5 2.4 39 8-46 46-89 (413)
63 1ccw_A Protein (glutamate muta 80.6 3 0.0001 33.4 5.8 46 8-53 3-48 (137)
64 2yxb_A Coenzyme B12-dependent 79.6 2.8 9.6E-05 34.7 5.5 47 8-54 18-64 (161)
65 1mvl_A PPC decarboxylase athal 76.9 2.5 8.6E-05 36.6 4.5 43 8-52 19-61 (209)
66 1y80_A Predicted cobalamin bin 75.6 5.3 0.00018 34.5 6.4 48 8-55 88-135 (210)
67 2wqk_A 5'-nucleotidase SURE; S 75.0 4.2 0.00014 36.3 5.6 112 10-148 3-127 (251)
68 1uqt_A Alpha, alpha-trehalose- 74.8 12 0.0004 37.1 9.4 109 342-482 333-454 (482)
69 3qjg_A Epidermin biosynthesis 72.1 4 0.00014 34.2 4.4 43 9-52 6-48 (175)
70 2i2x_B MTAC, methyltransferase 71.9 7.2 0.00025 35.0 6.4 44 8-51 123-166 (258)
71 1sbz_A Probable aromatic acid 71.7 4.2 0.00015 34.8 4.6 45 9-54 1-46 (197)
72 4dzz_A Plasmid partitioning pr 71.4 26 0.0009 29.4 9.9 37 10-46 2-40 (206)
73 3fgn_A Dethiobiotin synthetase 71.2 41 0.0014 29.8 11.3 122 8-150 25-167 (251)
74 1p3y_1 MRSD protein; flavoprot 70.8 2.1 7.1E-05 36.7 2.4 45 8-53 8-52 (194)
75 2qs7_A Uncharacterized protein 69.9 5.1 0.00017 32.4 4.5 47 1-48 2-48 (144)
76 1kjn_A MTH0777; hypotethical p 69.4 4.3 0.00015 32.6 3.7 46 8-53 6-53 (157)
77 3ezx_A MMCP 1, monomethylamine 69.0 10 0.00035 32.9 6.6 47 8-54 92-138 (215)
78 2ywr_A Phosphoribosylglycinami 68.5 57 0.002 28.1 12.1 103 9-146 2-108 (216)
79 3tov_A Glycosyl transferase fa 68.2 48 0.0016 30.9 11.7 101 9-150 186-290 (349)
80 3dfz_A SIRC, precorrin-2 dehyd 66.8 6 0.00021 34.6 4.6 152 272-461 26-186 (223)
81 4dim_A Phosphoribosylglycinami 65.9 20 0.00069 34.2 8.7 33 8-45 7-39 (403)
82 3lqk_A Dipicolinate synthase s 65.2 7.2 0.00025 33.5 4.7 40 8-48 7-47 (201)
83 3q0i_A Methionyl-tRNA formyltr 64.8 78 0.0027 29.1 12.0 36 4-45 4-39 (318)
84 2ejb_A Probable aromatic acid 64.7 9.2 0.00032 32.4 5.2 43 10-53 3-45 (189)
85 3mcu_A Dipicolinate synthase, 64.6 6.1 0.00021 34.1 4.1 40 8-48 5-45 (207)
86 3vot_A L-amino acid ligase, BL 64.6 10 0.00035 36.7 6.3 35 107-143 65-101 (425)
87 3auf_A Glycinamide ribonucleot 64.4 72 0.0025 27.8 12.1 104 8-146 22-129 (229)
88 2iz6_A Molybdenum cofactor car 63.4 17 0.00057 30.4 6.5 46 342-387 91-140 (176)
89 3mc3_A DSRE/DSRF-like family p 63.0 13 0.00044 29.4 5.6 38 9-46 16-56 (134)
90 2bw0_A 10-FTHFDH, 10-formyltet 61.0 59 0.002 30.2 10.5 32 8-44 22-53 (329)
91 1psw_A ADP-heptose LPS heptosy 58.6 64 0.0022 29.7 10.6 104 9-149 181-289 (348)
92 3qxc_A Dethiobiotin synthetase 58.5 52 0.0018 29.0 9.3 35 9-43 21-57 (242)
93 2r8r_A Sensor protein; KDPD, P 57.9 13 0.00044 32.6 5.0 39 8-46 6-44 (228)
94 3pdi_A Nitrogenase MOFE cofact 57.0 82 0.0028 31.0 11.4 34 108-146 392-425 (483)
95 1g63_A Epidermin modifying enz 57.0 8.1 0.00028 32.6 3.5 42 10-52 4-45 (181)
96 2q5c_A NTRC family transcripti 55.2 17 0.00059 30.9 5.4 30 118-150 141-170 (196)
97 2pju_A Propionate catabolism o 54.4 15 0.0005 32.2 4.8 29 357-388 64-92 (225)
98 3u7q_B Nitrogenase molybdenum- 54.3 1.1E+02 0.0037 30.5 11.7 34 9-47 365-398 (523)
99 1qzu_A Hypothetical protein MD 54.2 8.2 0.00028 33.3 3.1 44 8-52 19-63 (206)
100 3iqw_A Tail-anchored protein t 54.0 77 0.0026 29.4 10.1 40 9-48 16-56 (334)
101 1qgu_B Protein (nitrogenase mo 53.5 61 0.0021 32.3 9.8 35 8-47 360-394 (519)
102 2vqe_B 30S ribosomal protein S 53.4 72 0.0025 28.3 9.1 33 117-149 156-190 (256)
103 2q5c_A NTRC family transcripti 52.8 11 0.00039 32.1 3.8 30 356-388 51-80 (196)
104 3ty2_A 5'-nucleotidase SURE; s 50.8 17 0.00057 32.5 4.6 40 8-49 11-50 (261)
105 2lnd_A De novo designed protei 50.8 22 0.00074 24.9 4.1 49 377-439 50-100 (112)
106 3bbn_B Ribosomal protein S2; s 49.9 95 0.0033 27.0 9.2 31 118-148 156-188 (231)
107 2gk4_A Conserved hypothetical 49.3 22 0.00077 31.1 5.2 25 19-45 28-52 (232)
108 4b4o_A Epimerase family protei 49.3 18 0.00061 32.8 4.9 33 9-45 1-33 (298)
109 3kcq_A Phosphoribosylglycinami 49.2 1.3E+02 0.0043 25.9 10.0 107 3-149 4-113 (215)
110 3io3_A DEHA2D07832P; chaperone 48.6 70 0.0024 29.9 8.9 39 8-46 17-58 (348)
111 1id1_A Putative potassium chan 47.6 12 0.00041 30.2 3.0 33 8-45 3-35 (153)
112 1fmt_A Methionyl-tRNA FMet for 46.6 1.2E+02 0.0042 27.7 10.1 100 7-149 2-112 (314)
113 1mio_B Nitrogenase molybdenum 45.3 54 0.0018 32.0 7.9 34 108-146 376-409 (458)
114 3bul_A Methionine synthase; tr 45.1 28 0.00097 35.1 5.8 48 8-55 98-145 (579)
115 2q6t_A DNAB replication FORK h 44.3 1.5E+02 0.0051 28.6 10.9 42 10-51 202-244 (444)
116 1lss_A TRK system potassium up 43.7 27 0.00094 27.0 4.6 32 8-44 4-35 (140)
117 3n7t_A Macrophage binding prot 42.7 49 0.0017 29.2 6.5 37 9-45 10-57 (247)
118 3s55_A Putative short-chain de 41.6 74 0.0025 28.3 7.8 33 10-45 11-43 (281)
119 2ixd_A LMBE-related protein; h 40.9 96 0.0033 27.2 8.1 21 105-127 85-105 (242)
120 1p9o_A Phosphopantothenoylcyst 39.3 18 0.00062 33.3 3.1 36 11-46 40-89 (313)
121 3nxa_A Protein S100-A16; S100 37.4 49 0.0017 24.4 4.8 59 421-483 27-85 (100)
122 3hn2_A 2-dehydropantoate 2-red 37.3 50 0.0017 30.2 5.9 33 9-46 3-35 (312)
123 3icc_A Putative 3-oxoacyl-(acy 37.1 2E+02 0.0069 24.7 11.4 34 9-45 7-40 (255)
124 3f67_A Putative dienelactone h 36.6 45 0.0015 28.3 5.3 37 8-44 31-67 (241)
125 1xmp_A PURE, phosphoribosylami 36.4 1.8E+02 0.0061 23.9 11.0 143 279-464 11-165 (170)
126 2g1u_A Hypothetical protein TM 36.2 33 0.0011 27.5 4.0 33 8-45 19-51 (155)
127 3pxx_A Carveol dehydrogenase; 36.0 1E+02 0.0035 27.3 7.9 32 10-44 11-42 (287)
128 1jkx_A GART;, phosphoribosylgl 35.9 2E+02 0.007 24.5 12.0 103 9-146 1-107 (212)
129 2x5n_A SPRPN10, 26S proteasome 35.7 1.3E+02 0.0043 25.3 7.7 61 9-71 107-171 (192)
130 3g0o_A 3-hydroxyisobutyrate de 35.6 19 0.00064 33.0 2.6 32 8-44 7-38 (303)
131 2r6j_A Eugenol synthase 1; phe 35.6 41 0.0014 30.6 5.1 33 10-46 13-45 (318)
132 1qkk_A DCTD, C4-dicarboxylate 35.6 99 0.0034 24.1 6.9 48 377-440 74-121 (155)
133 2lpm_A Two-component response 35.5 34 0.0012 26.5 3.8 35 111-147 47-86 (123)
134 3i83_A 2-dehydropantoate 2-red 35.3 50 0.0017 30.3 5.6 40 9-54 3-42 (320)
135 4eto_A Protein S100-A4; calciu 34.8 25 0.00086 25.6 2.7 56 422-483 26-83 (93)
136 4e5v_A Putative THUA-like prot 34.8 44 0.0015 30.2 4.9 38 7-45 3-43 (281)
137 3da8_A Probable 5'-phosphoribo 34.8 1.8E+02 0.006 25.0 8.5 104 8-146 12-117 (215)
138 3av3_A Phosphoribosylglycinami 34.7 2.1E+02 0.0073 24.3 11.8 107 9-149 4-113 (212)
139 2w36_A Endonuclease V; hypoxan 34.3 57 0.0019 28.3 5.2 40 107-146 91-137 (225)
140 1pno_A NAD(P) transhydrogenase 33.8 43 0.0015 27.4 4.0 36 9-46 24-64 (180)
141 4hb9_A Similarities with proba 33.7 25 0.00085 33.3 3.3 29 9-42 2-30 (412)
142 3ksu_A 3-oxoacyl-acyl carrier 33.6 86 0.003 27.6 6.7 33 9-44 11-43 (262)
143 1o97_C Electron transferring f 33.5 48 0.0016 29.7 4.9 41 106-148 101-147 (264)
144 1d4o_A NADP(H) transhydrogenas 33.3 44 0.0015 27.4 4.0 36 9-46 23-63 (184)
145 2wm8_A MDP-1, magnesium-depend 33.1 1.6E+02 0.0055 23.9 8.1 90 25-147 73-164 (187)
146 3lp6_A Phosphoribosylaminoimid 33.0 2.1E+02 0.007 23.6 8.9 140 281-462 9-157 (174)
147 4e5s_A MCCFLIKE protein (BA_56 32.9 51 0.0017 30.6 5.1 74 292-387 62-137 (331)
148 3kjh_A CO dehydrogenase/acetyl 32.6 26 0.00089 30.5 3.0 37 9-45 1-37 (254)
149 3to5_A CHEY homolog; alpha(5)b 32.6 55 0.0019 25.7 4.6 42 107-150 47-97 (134)
150 1bg6_A N-(1-D-carboxylethyl)-L 32.6 27 0.00092 32.6 3.3 32 8-44 4-35 (359)
151 3pgx_A Carveol dehydrogenase; 32.4 1.4E+02 0.0047 26.4 8.0 32 10-44 16-47 (280)
152 4eg0_A D-alanine--D-alanine li 32.4 50 0.0017 30.2 5.1 38 8-45 13-54 (317)
153 2vo1_A CTP synthase 1; pyrimid 32.2 51 0.0018 29.5 4.6 38 8-45 22-62 (295)
154 3goc_A Endonuclease V; alpha-b 32.2 52 0.0018 28.7 4.7 40 107-146 95-141 (237)
155 1efv_B Electron transfer flavo 32.0 53 0.0018 29.2 4.9 41 106-148 105-151 (255)
156 2ehd_A Oxidoreductase, oxidore 32.0 54 0.0019 28.1 5.0 33 10-45 6-38 (234)
157 1pjq_A CYSG, siroheme synthase 31.8 75 0.0026 31.0 6.4 148 279-461 13-168 (457)
158 3pdi_B Nitrogenase MOFE cofact 31.7 39 0.0013 33.0 4.4 34 108-146 366-399 (458)
159 2vpq_A Acetyl-COA carboxylase; 31.7 1.5E+02 0.005 28.6 8.6 31 10-45 3-33 (451)
160 3rkr_A Short chain oxidoreduct 31.6 57 0.0019 28.8 5.2 33 10-45 30-62 (262)
161 3s2u_A UDP-N-acetylglucosamine 31.6 65 0.0022 30.2 5.8 27 356-384 92-121 (365)
162 3tqr_A Phosphoribosylglycinami 31.6 1.6E+02 0.0055 25.2 7.8 113 1-149 1-114 (215)
163 3lrx_A Putative hydrogenase; a 31.4 38 0.0013 27.5 3.6 36 8-46 23-58 (158)
164 2r85_A PURP protein PF1517; AT 31.4 42 0.0014 30.7 4.4 32 8-45 2-33 (334)
165 3llv_A Exopolyphosphatase-rela 31.4 27 0.00092 27.4 2.6 31 9-44 7-37 (141)
166 1zi8_A Carboxymethylenebutenol 31.3 62 0.0021 27.2 5.3 37 8-44 27-63 (236)
167 4da9_A Short-chain dehydrogena 31.2 1.6E+02 0.0054 26.1 8.2 33 9-44 29-61 (280)
168 4b4k_A N5-carboxyaminoimidazol 31.2 2.3E+02 0.0077 23.5 11.9 145 279-464 22-176 (181)
169 3l6d_A Putative oxidoreductase 31.0 26 0.00088 32.1 2.8 32 8-44 9-40 (306)
170 3lyu_A Putative hydrogenase; t 30.9 50 0.0017 26.1 4.2 35 9-46 19-53 (142)
171 1ybh_A Acetolactate synthase, 30.9 1.5E+02 0.005 29.9 8.7 30 355-386 74-109 (590)
172 2fsv_C NAD(P) transhydrogenase 30.8 50 0.0017 27.7 4.0 36 9-46 47-87 (203)
173 3kkl_A Probable chaperone prot 30.7 81 0.0028 27.7 5.9 37 9-45 4-51 (244)
174 2lse_A Four helix bundle prote 36.9 10 0.00036 25.9 0.0 38 446-484 26-63 (101)
175 4fs3_A Enoyl-[acyl-carrier-pro 30.6 59 0.002 28.7 5.0 39 1-45 1-41 (256)
176 1u11_A PURE (N5-carboxyaminoim 30.5 2.3E+02 0.008 23.5 8.4 140 281-464 23-175 (182)
177 3e9m_A Oxidoreductase, GFO/IDH 30.5 3.1E+02 0.011 24.9 10.6 110 281-410 8-126 (330)
178 2zts_A Putative uncharacterize 30.4 59 0.002 28.1 5.0 45 10-54 32-77 (251)
179 3hwr_A 2-dehydropantoate 2-red 30.2 39 0.0013 31.1 3.9 30 8-42 19-48 (318)
180 2gt1_A Lipopolysaccharide hept 30.1 66 0.0023 29.4 5.5 36 109-150 247-282 (326)
181 1djl_A Transhydrogenase DIII; 30.0 52 0.0018 27.7 4.0 36 9-46 46-86 (207)
182 3qvl_A Putative hydantoin race 30.0 2.8E+02 0.0095 24.2 10.4 41 103-146 56-97 (245)
183 3fwz_A Inner membrane protein 29.9 24 0.00083 27.8 2.1 33 8-45 7-39 (140)
184 2hy5_B Intracellular sulfur ox 29.6 52 0.0018 26.0 3.9 33 13-45 11-45 (136)
185 2pju_A Propionate catabolism o 29.6 82 0.0028 27.3 5.6 28 118-148 153-180 (225)
186 1t9b_A Acetolactate synthase, 29.3 1.3E+02 0.0043 31.1 7.9 78 297-386 85-179 (677)
187 3nrc_A Enoyl-[acyl-carrier-pro 29.2 1.2E+02 0.0042 26.8 7.1 42 10-53 27-69 (280)
188 1dhr_A Dihydropteridine reduct 29.2 52 0.0018 28.6 4.4 40 1-45 1-40 (241)
189 1efp_B ETF, protein (electron 29.1 53 0.0018 29.1 4.3 40 107-148 103-148 (252)
190 1jx7_A Hypothetical protein YC 29.1 54 0.0018 24.6 4.0 27 19-45 15-43 (117)
191 2hy5_A Putative sulfurtransfer 28.9 78 0.0027 24.5 4.9 33 13-45 6-41 (130)
192 1wcv_1 SOJ, segregation protei 28.7 42 0.0014 29.6 3.7 39 8-46 5-45 (257)
193 4g6h_A Rotenone-insensitive NA 28.3 25 0.00085 34.9 2.3 34 8-46 42-75 (502)
194 3dfu_A Uncharacterized protein 28.1 40 0.0014 29.5 3.3 33 8-45 6-38 (232)
195 3l7i_A Teichoic acid biosynthe 28.0 18 0.00061 37.9 1.2 117 344-480 603-719 (729)
196 3v2h_A D-beta-hydroxybutyrate 28.0 59 0.002 29.1 4.6 32 10-44 26-57 (281)
197 1xrs_B D-lysine 5,6-aminomutas 28.0 36 0.0012 30.4 3.0 47 8-54 120-175 (262)
198 1o4v_A Phosphoribosylaminoimid 27.9 2.6E+02 0.0089 23.2 11.3 139 280-464 14-165 (183)
199 2ag5_A DHRS6, dehydrogenase/re 27.8 96 0.0033 26.9 5.9 38 1-44 1-38 (246)
200 1iow_A DD-ligase, DDLB, D-ALA\ 27.7 81 0.0028 28.3 5.6 37 9-45 3-43 (306)
201 2fb6_A Conserved hypothetical 27.6 56 0.0019 25.0 3.7 38 8-45 7-48 (117)
202 3op4_A 3-oxoacyl-[acyl-carrier 27.5 85 0.0029 27.3 5.5 42 1-45 1-42 (248)
203 2w70_A Biotin carboxylase; lig 27.2 1.9E+02 0.0063 27.8 8.4 30 10-44 4-33 (449)
204 1f0y_A HCDH, L-3-hydroxyacyl-C 27.1 36 0.0012 30.9 3.1 32 9-45 16-47 (302)
205 1xp8_A RECA protein, recombina 27.1 1.6E+02 0.0054 27.7 7.6 39 10-48 76-114 (366)
206 1z82_A Glycerol-3-phosphate de 27.0 39 0.0013 31.3 3.3 33 8-45 14-46 (335)
207 3ghy_A Ketopantoate reductase 27.0 44 0.0015 31.0 3.6 33 8-45 3-35 (335)
208 2bru_C NAD(P) transhydrogenase 27.0 49 0.0017 27.1 3.3 36 9-46 31-71 (186)
209 3qha_A Putative oxidoreductase 26.7 32 0.0011 31.2 2.6 32 8-44 15-46 (296)
210 4dll_A 2-hydroxy-3-oxopropiona 26.7 65 0.0022 29.5 4.8 32 8-44 31-62 (320)
211 4dmm_A 3-oxoacyl-[acyl-carrier 26.6 1.9E+02 0.0064 25.4 7.8 33 9-44 28-60 (269)
212 2i2c_A Probable inorganic poly 26.5 25 0.00086 31.6 1.8 29 356-386 35-69 (272)
213 3pfb_A Cinnamoyl esterase; alp 26.4 83 0.0028 27.1 5.3 37 9-45 46-84 (270)
214 3zzm_A Bifunctional purine bio 26.1 1.1E+02 0.0037 30.1 6.1 100 8-128 9-111 (523)
215 4eso_A Putative oxidoreductase 26.1 76 0.0026 27.8 4.9 33 10-45 9-41 (255)
216 3hr8_A Protein RECA; alpha and 25.8 2.3E+02 0.0079 26.4 8.4 37 11-47 64-100 (356)
217 2wtm_A EST1E; hydrolase; 1.60A 25.8 88 0.003 26.8 5.3 37 9-45 27-65 (251)
218 1e7w_A Pteridine reductase; di 25.7 73 0.0025 28.6 4.8 31 10-43 10-40 (291)
219 3sbx_A Putative uncharacterize 25.6 97 0.0033 26.0 5.1 37 8-45 13-53 (189)
220 4fbl_A LIPS lipolytic enzyme; 25.5 43 0.0015 29.8 3.2 32 12-43 54-85 (281)
221 1imj_A CIB, CCG1-interacting f 25.4 1.1E+02 0.0038 24.9 5.8 37 9-45 32-70 (210)
222 3oec_A Carveol dehydrogenase ( 25.4 2E+02 0.007 26.0 8.0 32 10-44 47-78 (317)
223 3rg8_A Phosphoribosylaminoimid 25.4 2.7E+02 0.0093 22.5 10.0 143 279-464 2-152 (159)
224 3nvt_A 3-deoxy-D-arabino-heptu 25.3 4.3E+02 0.015 24.9 11.1 128 281-438 228-375 (385)
225 4ds3_A Phosphoribosylglycinami 25.2 3.1E+02 0.011 23.2 9.5 110 5-149 5-117 (209)
226 3dkr_A Esterase D; alpha beta 25.2 60 0.002 27.4 4.0 36 9-44 22-57 (251)
227 3pnx_A Putative sulfurtransfer 25.2 92 0.0031 25.4 4.8 45 8-52 5-49 (160)
228 1spx_A Short-chain reductase f 25.2 1.1E+02 0.0036 27.2 5.8 39 1-45 1-39 (278)
229 3gpi_A NAD-dependent epimerase 25.1 85 0.0029 27.8 5.2 32 9-45 4-35 (286)
230 4h1h_A LMO1638 protein; MCCF-l 25.0 71 0.0024 29.5 4.6 73 292-386 62-136 (327)
231 3uve_A Carveol dehydrogenase ( 24.9 2.1E+02 0.0072 25.3 7.9 33 9-44 11-43 (286)
232 3ucx_A Short chain dehydrogena 24.9 2.3E+02 0.008 24.6 8.1 32 10-44 12-43 (264)
233 4ao6_A Esterase; hydrolase, th 24.8 57 0.0019 28.6 3.9 38 8-45 55-94 (259)
234 3u5t_A 3-oxoacyl-[acyl-carrier 24.8 1.2E+02 0.0043 26.7 6.2 34 8-44 26-59 (267)
235 3eod_A Protein HNR; response r 24.8 1.5E+02 0.005 22.0 5.9 38 1-43 1-38 (130)
236 3fke_A Polymerase cofactor VP3 24.8 90 0.0031 23.4 4.1 46 428-480 29-74 (129)
237 2d1y_A Hypothetical protein TT 24.7 1E+02 0.0035 26.9 5.6 39 1-45 1-39 (256)
238 2hmt_A YUAA protein; RCK, KTN, 24.7 40 0.0014 26.1 2.5 32 9-45 7-38 (144)
239 3ga2_A Endonuclease V; alpha-b 24.6 66 0.0023 28.3 4.0 40 107-146 97-143 (246)
240 4iiu_A 3-oxoacyl-[acyl-carrier 24.6 2E+02 0.0067 25.2 7.5 33 10-45 27-59 (267)
241 3q2i_A Dehydrogenase; rossmann 24.6 3.5E+02 0.012 24.8 9.6 110 280-410 15-134 (354)
242 1qsg_A Enoyl-[acyl-carrier-pro 24.5 1.2E+02 0.004 26.6 5.9 34 10-45 10-44 (265)
243 3h7a_A Short chain dehydrogena 24.4 1.8E+02 0.0062 25.2 7.2 33 9-44 7-39 (252)
244 4gbj_A 6-phosphogluconate dehy 24.4 64 0.0022 29.3 4.2 29 10-43 7-35 (297)
245 1uan_A Hypothetical protein TT 24.4 2.5E+02 0.0085 24.1 7.9 21 105-127 83-103 (227)
246 3afn_B Carbonyl reductase; alp 24.4 80 0.0027 27.4 4.8 33 10-45 8-40 (258)
247 1zl0_A Hypothetical protein PA 23.9 1.1E+02 0.0037 28.1 5.5 75 291-387 63-139 (311)
248 2gez_A L-asparaginase alpha su 23.9 1.6E+02 0.0055 24.8 6.1 25 457-481 40-64 (195)
249 3edm_A Short chain dehydrogena 23.5 2.1E+02 0.0072 24.9 7.5 33 9-44 8-40 (259)
250 3vps_A TUNA, NAD-dependent epi 23.5 76 0.0026 28.6 4.6 33 9-45 8-40 (321)
251 3lf2_A Short chain oxidoreduct 23.5 93 0.0032 27.4 5.1 35 8-45 7-41 (265)
252 2pd4_A Enoyl-[acyl-carrier-pro 23.5 1E+02 0.0036 27.2 5.4 34 10-45 7-41 (275)
253 3qjg_A Epidermin biosynthesis 23.5 3.1E+02 0.011 22.5 8.0 113 280-404 7-142 (175)
254 1xkq_A Short-chain reductase f 23.4 96 0.0033 27.5 5.2 33 10-45 7-39 (280)
255 1ydh_A AT5G11950; structural g 23.4 86 0.0029 27.0 4.5 95 280-384 10-141 (216)
256 3n22_A Protein S100-A2; EF-han 23.3 42 0.0015 24.6 2.2 54 423-482 28-83 (98)
257 4f0j_A Probable hydrolytic enz 23.2 71 0.0024 28.1 4.3 37 9-45 46-82 (315)
258 1mkz_A Molybdenum cofactor bio 23.2 2E+02 0.0068 23.5 6.6 51 8-58 10-64 (172)
259 1g8m_A Aicar transformylase-IM 23.1 73 0.0025 31.8 4.3 105 1-128 1-105 (593)
260 2qyt_A 2-dehydropantoate 2-red 23.1 27 0.00093 31.9 1.3 32 8-44 8-45 (317)
261 3eag_A UDP-N-acetylmuramate:L- 23.1 67 0.0023 29.6 4.1 33 8-44 4-36 (326)
262 1ks9_A KPA reductase;, 2-dehyd 23.0 56 0.0019 29.2 3.5 32 9-45 1-32 (291)
263 1u0t_A Inorganic polyphosphate 23.0 34 0.0012 31.4 2.0 32 353-386 72-107 (307)
264 3da8_A Probable 5'-phosphoribo 23.0 3.3E+02 0.011 23.3 8.1 102 298-437 79-182 (215)
265 3r3s_A Oxidoreductase; structu 22.9 1.4E+02 0.0047 26.8 6.2 34 9-45 49-82 (294)
266 3bfv_A CAPA1, CAPB2, membrane 22.9 89 0.0031 27.8 4.8 38 8-45 81-120 (271)
267 1wrd_A TOM1, target of MYB pro 22.8 1.2E+02 0.0043 22.5 4.7 31 424-461 2-32 (103)
268 1vi6_A 30S ribosomal protein S 22.8 65 0.0022 27.6 3.5 32 118-149 114-147 (208)
269 4gi5_A Quinone reductase; prot 22.8 1.1E+02 0.0036 27.7 5.2 36 8-43 22-60 (280)
270 4e3z_A Putative oxidoreductase 22.7 2.2E+02 0.0075 24.9 7.4 34 8-44 25-58 (272)
271 1k2x_A Putative L-asparaginase 22.6 1.8E+02 0.0062 24.1 6.1 31 451-481 31-61 (177)
272 3cky_A 2-hydroxymethyl glutara 22.6 84 0.0029 28.3 4.6 32 8-44 4-35 (301)
273 3sr3_A Microcin immunity prote 22.6 84 0.0029 29.2 4.6 74 292-387 63-138 (336)
274 1gsa_A Glutathione synthetase; 22.6 65 0.0022 29.1 3.9 37 9-45 2-41 (316)
275 1gee_A Glucose 1-dehydrogenase 22.6 91 0.0031 27.2 4.8 32 10-44 8-39 (261)
276 2raf_A Putative dinucleotide-b 22.5 56 0.0019 27.8 3.2 32 8-44 19-50 (209)
277 1yt5_A Inorganic polyphosphate 22.5 30 0.001 30.8 1.5 29 356-386 41-72 (258)
278 3pe6_A Monoglyceride lipase; a 22.3 72 0.0025 27.8 4.1 38 8-45 41-78 (303)
279 3sty_A Methylketone synthase 1 22.2 78 0.0027 27.1 4.2 36 10-45 13-48 (267)
280 3hh1_A Tetrapyrrole methylase 22.2 62 0.0021 24.6 3.1 17 27-43 70-86 (117)
281 3obb_A Probable 3-hydroxyisobu 22.2 71 0.0024 29.1 4.0 29 10-43 5-33 (300)
282 2fx5_A Lipase; alpha-beta hydr 22.2 65 0.0022 28.0 3.7 37 8-44 48-84 (258)
283 3v8b_A Putative dehydrogenase, 22.2 2.4E+02 0.0082 25.0 7.6 34 9-45 28-61 (283)
284 3m6m_D Sensory/regulatory prot 22.1 1.1E+02 0.0036 23.6 4.7 36 112-149 53-99 (143)
285 2an1_A Putative kinase; struct 22.0 39 0.0013 30.7 2.1 27 357-385 64-94 (292)
286 1byi_A Dethiobiotin synthase; 22.0 97 0.0033 26.2 4.7 32 11-42 4-36 (224)
287 3ioy_A Short-chain dehydrogena 22.0 1.2E+02 0.0042 27.6 5.7 33 10-45 9-41 (319)
288 2l2q_A PTS system, cellobiose- 22.0 1.3E+02 0.0044 22.4 4.8 36 8-43 4-39 (109)
289 3rwb_A TPLDH, pyridoxal 4-dehy 21.9 1E+02 0.0035 26.8 4.9 32 10-44 7-38 (247)
290 2p91_A Enoyl-[acyl-carrier-pro 21.9 1.3E+02 0.0045 26.7 5.8 34 10-45 22-56 (285)
291 3o1l_A Formyltetrahydrofolate 21.9 4.5E+02 0.015 23.8 10.8 105 5-149 103-212 (302)
292 3grp_A 3-oxoacyl-(acyl carrier 21.9 1.1E+02 0.0039 26.9 5.3 34 9-45 27-60 (266)
293 1ehi_A LMDDL2, D-alanine:D-lac 21.8 82 0.0028 29.7 4.5 37 8-44 3-44 (377)
294 3kkj_A Amine oxidase, flavin-c 21.8 50 0.0017 28.5 2.9 28 10-42 4-31 (336)
295 3qrx_B Melittin; calcium-bindi 21.7 24 0.00082 18.4 0.4 17 367-383 1-17 (26)
296 2a4k_A 3-oxoacyl-[acyl carrier 21.7 1E+02 0.0035 27.1 4.9 33 10-45 7-39 (263)
297 3nso_A Protein S100-A3; EF-han 21.7 77 0.0027 23.4 3.4 53 422-482 26-82 (101)
298 3li6_A Calcium-binding protein 21.5 1.5E+02 0.005 18.8 4.6 51 421-480 13-63 (66)
299 3l18_A Intracellular protease 21.5 2E+02 0.0067 23.0 6.3 37 8-45 2-38 (168)
300 2cob_A LCOR protein; MLR2, KIA 21.4 95 0.0032 21.3 3.4 31 421-454 10-40 (70)
301 3e18_A Oxidoreductase; dehydro 21.4 4E+02 0.014 24.5 9.3 109 281-410 8-124 (359)
302 3of5_A Dethiobiotin synthetase 21.2 1E+02 0.0035 26.7 4.6 36 8-43 3-40 (228)
303 3q9l_A Septum site-determining 21.1 1E+02 0.0036 26.7 4.8 36 10-45 3-40 (260)
304 3pk0_A Short-chain dehydrogena 21.0 1.2E+02 0.0042 26.6 5.3 33 10-45 11-43 (262)
305 3db2_A Putative NADPH-dependen 21.0 3.4E+02 0.012 24.9 8.7 109 281-410 8-125 (354)
306 2fuk_A XC6422 protein; A/B hyd 20.8 1.3E+02 0.0044 24.8 5.3 37 9-45 37-78 (220)
307 3qit_A CURM TE, polyketide syn 20.8 86 0.0029 26.9 4.2 36 10-45 27-62 (286)
308 1y1p_A ARII, aldehyde reductas 20.8 1.3E+02 0.0046 27.1 5.8 34 8-45 11-44 (342)
309 3k9g_A PF-32 protein; ssgcid, 20.7 94 0.0032 27.3 4.5 38 8-46 26-65 (267)
310 3l4b_C TRKA K+ channel protien 20.7 33 0.0011 29.4 1.3 32 9-45 1-32 (218)
311 3l4e_A Uncharacterized peptida 20.7 1.6E+02 0.0055 25.0 5.7 45 270-314 19-63 (206)
312 2etv_A Iron(III) ABC transport 20.7 85 0.0029 29.1 4.3 36 108-146 88-124 (346)
313 2pd6_A Estradiol 17-beta-dehyd 20.5 1.5E+02 0.005 25.8 5.7 33 10-45 8-40 (264)
314 2gdz_A NAD+-dependent 15-hydro 20.5 1.7E+02 0.0058 25.5 6.2 40 1-45 1-40 (267)
315 3euw_A MYO-inositol dehydrogen 20.5 4.8E+02 0.017 23.6 10.6 109 281-410 7-124 (344)
316 1eiw_A Hypothetical protein MT 20.4 1.3E+02 0.0043 22.8 4.4 65 354-439 36-109 (111)
317 3tjr_A Short chain dehydrogena 20.4 1.2E+02 0.004 27.4 5.1 33 10-45 32-64 (301)
318 2qx0_A 7,8-dihydro-6-hydroxyme 20.4 1.2E+02 0.0042 24.6 4.6 27 281-307 3-29 (159)
319 4hn9_A Iron complex transport 20.3 70 0.0024 29.5 3.6 37 108-147 108-144 (335)
320 2h7i_A Enoyl-[acyl-carrier-pro 20.3 1.6E+02 0.0055 25.8 6.0 34 10-45 8-42 (269)
321 2c5m_A CTP synthase; cytidine 20.3 81 0.0028 28.0 3.6 37 8-44 22-61 (294)
322 1b93_A Protein (methylglyoxal 20.3 3.4E+02 0.012 21.8 8.3 95 8-145 11-118 (152)
323 3t7c_A Carveol dehydrogenase; 20.2 3E+02 0.01 24.5 8.0 33 9-44 28-60 (299)
324 3obi_A Formyltetrahydrofolate 20.1 1.1E+02 0.0039 27.5 4.8 103 298-438 156-260 (288)
325 1tvm_A PTS system, galactitol- 20.1 2.3E+02 0.008 21.1 6.0 36 8-43 21-57 (113)
326 2vrn_A Protease I, DR1199; cys 20.1 2.2E+02 0.0074 23.4 6.4 37 8-45 9-45 (190)
327 3ppi_A 3-hydroxyacyl-COA dehyd 20.1 1.1E+02 0.0036 27.2 4.7 34 9-45 30-63 (281)
328 1f9y_A HPPK, protein (6-hydrox 20.0 96 0.0033 25.2 3.8 27 281-307 2-28 (158)
329 3dqz_A Alpha-hydroxynitrIle ly 20.0 62 0.0021 27.6 3.1 36 10-45 5-40 (258)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=4.4e-68 Score=530.75 Aligned_cols=428 Identities=27% Similarity=0.436 Sum_probs=343.5
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCC--CeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCCc
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHG--ALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCES 85 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rG--h~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~ 85 (484)
++||+++|+|++||++|++.||+.|++|| +.|||++++.+...+.+... ....+++|+.+| ++++++.+.
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~---~~~~~i~~~~ip-----dglp~~~~~ 84 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN---EFLPNIKYYNVH-----DGLPKGYVS 84 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS---CCCTTEEEEECC-----CCCCTTCCC
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc---cCCCCceEEecC-----CCCCCCccc
Confidence 68999999999999999999999999999 99999998766554432210 113469999987 467665543
Q ss_pred cCCCCccchHHHHHHHHH-HchHHHHHHHHhcCCCCeEEEecCCCcchHHHHHHcCCCcEEEecchHHHHHHHHhhhhcc
Q 011490 86 WDKLPSMALLPKFFAAIE-MLRLPLETLFKEIQPKPSCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCLLCLHSLSVSK 164 (484)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~ 164 (484)
... ....+..+..... .+.+.+++++++.+.++||||+|.+++|+..+|+++|||++.|++++++.+..+.+.+...
T Consensus 85 ~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~ 162 (454)
T 3hbf_A 85 SGN--PREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIR 162 (454)
T ss_dssp CSC--TTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHH
T ss_pred cCC--hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHH
Confidence 332 1133344444332 4455566655543468999999999999999999999999999999999998888765422
Q ss_pred cC-C--CCCCCCcccccCCCCCccccccccCchhhh------hhhhHHHHHHhhhcccEEEeccccccCHHHHHHHHhcc
Q 011490 165 AH-E--SVSSDSEYFLVPGLPDRVEITKAQLPEILK------LKSFGEPILAAEMASYGVIVNSFEEMEPAYVEEYKNAR 235 (484)
Q Consensus 165 ~~-~--~~~~~~~~~~~Pg~~~~~~l~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~ 235 (484)
.. . ..........+||+|+ ++.+++++++. +..++..+.+...+++++++||+.+||+++++.+++.+
T Consensus 163 ~~~~~~~~~~~~~~~~iPg~p~---~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~ 239 (454)
T 3hbf_A 163 EKTGSKEVHDVKSIDVLPGFPE---LKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF 239 (454)
T ss_dssp HTCCHHHHTTSSCBCCSTTSCC---BCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS
T ss_pred hhcCCCccccccccccCCCCCC---cChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC
Confidence 11 0 0011122335899986 77788877643 44556666677788999999999999999998888766
Q ss_pred CCceEEeCcccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCCEEEEE
Q 011490 236 DGKVWCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDSSTRQLIELGLGLEATKKPFIWVI 315 (484)
Q Consensus 236 ~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~ 315 (484)
+++++|||++...... ...+++++.+||+.++++++|||||||+...+.+++.+++.+++..+++|||++
T Consensus 240 -~~v~~vGPl~~~~~~~---------~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~ 309 (454)
T 3hbf_A 240 -KLLLNVGPFNLTTPQR---------KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSF 309 (454)
T ss_dssp -SCEEECCCHHHHSCCS---------CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEEC
T ss_pred -CCEEEECCcccccccc---------cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEe
Confidence 7999999997532211 011256799999999888999999999999999999999999999999999999
Q ss_pred eCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhHHHHHHcCCCEeccccccchhhHHH
Q 011490 316 RPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEK 395 (484)
Q Consensus 316 ~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 395 (484)
+... ... +|++|.++. ++|+.+.+|+||.++|+|+++++|||||||||++|++++|||||++|+++||+.||+
T Consensus 310 ~~~~----~~~--lp~~~~~~~-~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~ 382 (454)
T 3hbf_A 310 RGDP----KEK--LPKGFLERT-KTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTI 382 (454)
T ss_dssp CSCH----HHH--SCTTHHHHT-TTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred CCcc----hhc--CCHhHHhhc-CCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHH
Confidence 8753 122 777776654 468888899999999999998889999999999999999999999999999999999
Q ss_pred HHHHH-hcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHH
Q 011490 396 LVVQV-LRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKL 474 (484)
Q Consensus 396 ~~~e~-~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~ 474 (484)
+++ + +|+|+.++.. .+++++|.++|+++|+| +++++||+||+++++++++++++|||++.++++
T Consensus 383 ~v~-~~~g~Gv~l~~~-------------~~~~~~l~~av~~ll~~-~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~ 447 (454)
T 3hbf_A 383 LTE-SVLEIGVGVDNG-------------VLTKESIKKALELTMSS-EKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTT 447 (454)
T ss_dssp HHH-TTSCSEEECGGG-------------SCCHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHH
T ss_pred HHH-HhhCeeEEecCC-------------CCCHHHHHHHHHHHHCC-ChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHH
Confidence 995 7 6999999866 69999999999999985 567799999999999999999999999999999
Q ss_pred HHHHHH
Q 011490 475 LIKDIL 480 (484)
Q Consensus 475 ~~~~~~ 480 (484)
|++.|.
T Consensus 448 ~v~~i~ 453 (454)
T 3hbf_A 448 LIQIVT 453 (454)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 999875
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=2.4e-62 Score=497.62 Aligned_cols=439 Identities=27% Similarity=0.443 Sum_probs=329.9
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHC-CCeEEEEeCCCc--hhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQH-GALVTIVTTPMN--AARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCE 84 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~r-Gh~V~~~~~~~~--~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~ 84 (484)
++||+++|+|++||++|++.||++|++| ||+|||++++.+ ...+.+... ....+++|+.+|... .++.
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~----~~~~-- 76 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVD----LTDL-- 76 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCC----CTTS--
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCC----CCCC--
Confidence 5799999999999999999999999998 999999998863 343443210 002479999987531 1111
Q ss_pred ccCCCCccchHHHHHHHHHHchHHHHHHHHhc--CCCC-eEEEecCCCcchHHHHHHcCCCcEEEecchHHHHHHHHhhh
Q 011490 85 SWDKLPSMALLPKFFAAIEMLRLPLETLFKEI--QPKP-SCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCLLCLHSLS 161 (484)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~-D~vI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~~ 161 (484)
.. .......+......+.+.+++++++. ..++ |+||+|.++.|+..+|+++|||++.+++++++....+.+++
T Consensus 77 --~~--~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 152 (480)
T 2vch_A 77 --SS--STRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLP 152 (480)
T ss_dssp --CT--TCCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHH
T ss_pred --CC--chhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHH
Confidence 00 11233334444455666777777652 2478 99999999999999999999999999999988777766655
Q ss_pred hcc--cCCCCCCCCcccccCCCCCccccccccCchhhh-----hhhhHHHHHHhhhcccEEEeccccccCHHHHHHHHhc
Q 011490 162 VSK--AHESVSSDSEYFLVPGLPDRVEITKAQLPEILK-----LKSFGEPILAAEMASYGVIVNSFEEMEPAYVEEYKNA 234 (484)
Q Consensus 162 ~~~--~~~~~~~~~~~~~~Pg~~~~~~l~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~ 234 (484)
... ..........+..+|++++ ++..+++..+. ....+....+.++++.++++|++.++++.....+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~Pg~~p---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~ 229 (480)
T 2vch_A 153 KLDETVSCEFRELTEPLMLPGCVP---VAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEP 229 (480)
T ss_dssp HHHHHCCSCGGGCSSCBCCTTCCC---BCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSC
T ss_pred HHHhcCCCcccccCCcccCCCCCC---CChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhc
Confidence 321 1111111122345677765 44444444332 1222233344566778889999999999877766542
Q ss_pred c--CCceEEeCcccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCCEE
Q 011490 235 R--DGKVWCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDSSTRQLIELGLGLEATKKPFI 312 (484)
Q Consensus 235 ~--~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i 312 (484)
. .+++++|||++....... .+..+.++.+||+.++++++|||||||+...+.+++.+++++++..+++||
T Consensus 230 ~~~~~~v~~vGpl~~~~~~~~--------~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~l 301 (480)
T 2vch_A 230 GLDKPPVYPVGPLVNIGKQEA--------KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFL 301 (480)
T ss_dssp CTTCCCEEECCCCCCCSCSCC-------------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred ccCCCcEEEEecccccccccc--------CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEE
Confidence 1 268999999976432100 001256799999998888899999999998889999999999999999999
Q ss_pred EEEeCCCCC-----------CCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhHHHHHHcCCCE
Q 011490 313 WVIRPGDQA-----------KGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPM 381 (484)
Q Consensus 313 ~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~ 381 (484)
|+++..... ..+..+ +|++|.++.+..++++.+|+||.+||+|+++++|||||||||++||+++||||
T Consensus 302 w~~~~~~~~~~~~~~~~~~~~~~~~~-lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~ 380 (480)
T 2vch_A 302 WVIRSPSGIANSSYFDSHSQTDPLTF-LPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPL 380 (480)
T ss_dssp EEECCCCSSTTTTTTCC--CSCGGGG-SCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCE
T ss_pred EEECCccccccccccccccccchhhh-cCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCE
Confidence 999875311 122223 88899888888888887899999999999999999999999999999999999
Q ss_pred eccccccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHH
Q 011490 382 VTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTA 461 (484)
Q Consensus 382 l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~ 461 (484)
|++|+++||+.||+++++++|+|+.++..+ ++.+++++|+++|+++|+++ +..+||+||++++++++++
T Consensus 381 i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~----------~~~~~~~~l~~av~~vl~~~-~~~~~r~~a~~l~~~~~~a 449 (480)
T 2vch_A 381 IAWPLYAEQKMNAVLLSEDIRAALRPRAGD----------DGLVRREEVARVVKGLMEGE-EGKGVRNKMKELKEAACRV 449 (480)
T ss_dssp EECCCSTTHHHHHHHHHHTTCCEECCCCCT----------TSCCCHHHHHHHHHHHHTST-HHHHHHHHHHHHHHHHHHH
T ss_pred EeccccccchHHHHHHHHHhCeEEEeeccc----------CCccCHHHHHHHHHHHhcCc-chHHHHHHHHHHHHHHHHH
Confidence 999999999999999745999999996541 13599999999999999843 5569999999999999999
Q ss_pred HhhCCChHHHHHHHHHHHHhh
Q 011490 462 IEEGGSSYLNIKLLIKDILQQ 482 (484)
Q Consensus 462 ~~~gg~~~~~~~~~~~~~~~~ 482 (484)
+.+||++..++++|++.+.+.
T Consensus 450 ~~~gGss~~~~~~~v~~~~~~ 470 (480)
T 2vch_A 450 LKDDGTSTKALSLVALKWKAH 470 (480)
T ss_dssp TSTTSHHHHHHHHHHHHHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHHh
Confidence 999999999999999998763
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=4.5e-63 Score=504.64 Aligned_cols=451 Identities=28% Similarity=0.538 Sum_probs=325.3
Q ss_pred CCCCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCC-CceEEEEeeCCCccCCC
Q 011490 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSG-LRIQVIEFYFPCQEVGL 79 (484)
Q Consensus 1 m~~~~~~~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~-~~i~~~~i~~~~~~~~~ 79 (484)
|+..+++++||+++|+|++||++|++.||++|++|||+|||++++.+...+.+........+ .+++|+.+|. ++
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~-----~l 75 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPD-----GL 75 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECC-----CC
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCC-----CC
Confidence 56655447899999999999999999999999999999999999876665543311100011 3699998872 34
Q ss_pred CCCCCccCCCCccchHHHHHHHH-HHchHHHHHHHHhc-----CCCCeEEEecCCCcchHHHHHHcCCCcEEEecchHHH
Q 011490 80 PEGCESWDKLPSMALLPKFFAAI-EMLRLPLETLFKEI-----QPKPSCLISDVCLPWTVSSACKFNVPRIVFHGFSCFC 153 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~-----~~~~D~vI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~ 153 (484)
+....... . . ..+..+.... ..+.+.++++++++ ..++|+||+|.++.|+..+|+++|||++.+++++++.
T Consensus 76 p~~~~~~~-~-~-~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~ 152 (482)
T 2pq6_A 76 TPMEGDGD-V-S-QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACS 152 (482)
T ss_dssp C------------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHH
T ss_pred CCcccccC-c-c-hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHH
Confidence 43100000 0 1 1122333333 45566777777643 2589999999999999999999999999999999887
Q ss_pred HHHHHhhhhc--ccCCCCC------C---CCcccccCCCCCccccccccCchhhh-------hhhhHHHHHHhhhcccEE
Q 011490 154 LLCLHSLSVS--KAHESVS------S---DSEYFLVPGLPDRVEITKAQLPEILK-------LKSFGEPILAAEMASYGV 215 (484)
Q Consensus 154 ~~~~~~~~~~--~~~~~~~------~---~~~~~~~Pg~~~~~~l~~~~l~~~~~-------~~~~~~~~~~~~~~~~~~ 215 (484)
...+.+++.. ..+.+.. . ......+|+++. ++..+++.++. +..++....+...+++.+
T Consensus 153 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 229 (482)
T 2pq6_A 153 LLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKN---FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTI 229 (482)
T ss_dssp HHHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCE
T ss_pred HHHHHHHHHHHhcCCCCCccccccccccccCccccCCCCCC---CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEE
Confidence 7665443321 0011100 0 111224566654 44445554432 233333445566678899
Q ss_pred EeccccccCHHHHHHHHhccCCceEEeCcccCC-CcccchhhccC--CCCCCCCcccccccCCCCCCcEEEEecCCCccC
Q 011490 216 IVNSFEEMEPAYVEEYKNARDGKVWCVGPVSLC-NKEDIDKLERG--DKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDS 292 (484)
Q Consensus 216 ~~~s~~~l~~~~~~~~~~~~~~~~~~vGp~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~ 292 (484)
++||+++||+++++.+++.+ +++++|||++.. +........+. ...+..+.++.+||+.++++++|||||||+...
T Consensus 230 l~nt~~~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~ 308 (482)
T 2pq6_A 230 LLNTFNELESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVM 308 (482)
T ss_dssp EESSCGGGGHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCC
T ss_pred EEcChHHHhHHHHHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccC
Confidence 99999999999888888877 899999999752 11100000000 111122456899999988888999999999888
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhHH
Q 011490 293 STRQLIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVL 372 (484)
Q Consensus 293 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~ 372 (484)
+.+++.+++.+++..+++|||+++.....+.... +|+++.++. ++|+.+.+|+||.++|+|+++++||||||+||++
T Consensus 309 ~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~-~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~ 385 (482)
T 2pq6_A 309 TPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVI--FSSEFTNEI-ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTT 385 (482)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGG--SCHHHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHH
T ss_pred CHHHHHHHHHHHHhcCCcEEEEEcCCcccccccc--CcHhHHHhc-CCCEEEEeecCHHHHhcCCCCCEEEecCCcchHH
Confidence 8888999999999999999999986421111122 567776554 5789999999999999999999999999999999
Q ss_pred HHHHcCCCEeccccccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHH
Q 011490 373 EAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAR 452 (484)
Q Consensus 373 eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~ 452 (484)
|++++|||||++|++.||+.||++++|++|+|+.++ . .+++++|.++|+++|+|++ +++||+||+
T Consensus 386 Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~-------------~~~~~~l~~~i~~ll~~~~-~~~~r~~a~ 450 (482)
T 2pq6_A 386 ESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-T-------------NVKREELAKLINEVIAGDK-GKKMKQKAM 450 (482)
T ss_dssp HHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-S-------------SCCHHHHHHHHHHHHTSHH-HHHHHHHHH
T ss_pred HHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-C-------------CCCHHHHHHHHHHHHcCCc-HHHHHHHHH
Confidence 999999999999999999999999954799999998 5 4999999999999998754 578999999
Q ss_pred HHHHHHHHHHhhCCChHHHHHHHHHHHHh
Q 011490 453 EYGETAKTAIEEGGSSYLNIKLLIKDILQ 481 (484)
Q Consensus 453 ~l~~~~~~~~~~gg~~~~~~~~~~~~~~~ 481 (484)
++++.+++++.+|||+..++++|++.+.+
T Consensus 451 ~l~~~~~~a~~~gGss~~~l~~~v~~~~~ 479 (482)
T 2pq6_A 451 ELKKKAEENTRPGGCSYMNLNKVIKDVLL 479 (482)
T ss_dssp HHHHHHHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999998754
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=4.1e-61 Score=485.42 Aligned_cols=436 Identities=25% Similarity=0.411 Sum_probs=319.3
Q ss_pred CCCCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHHCCCe--EEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCC
Q 011490 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGAL--VTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVG 78 (484)
Q Consensus 1 m~~~~~~~~kil~~~~~~~GHv~P~l~La~~L~~rGh~--V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~ 78 (484)
|..+++ ++||+++|+|++||++|++.||++|++|||+ |||++++.+.+.+.+.... ....+++|+.++. +
T Consensus 1 m~~~~~-~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~~-----g 72 (456)
T 2c1x_A 1 MSQTTT-NPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDISD-----G 72 (456)
T ss_dssp -------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECCC-----C
T ss_pred CCCCCC-CCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCCC-----C
Confidence 666555 7899999999999999999999999999765 5778876544433221100 0023699988762 4
Q ss_pred CCCCCCccCCCCccchHHHHHHHH-HHchHHHHHHHHhcCCCCeEEEecCCCcchHHHHHHcCCCcEEEecchHHHHHHH
Q 011490 79 LPEGCESWDKLPSMALLPKFFAAI-EMLRLPLETLFKEIQPKPSCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCLLCL 157 (484)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~ 157 (484)
+++...... .....+..+.... ..+.+.+.+++++.+.++|+||+|.++.|+..+|+++|||++.+++++++.+..+
T Consensus 73 lp~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~ 150 (456)
T 2c1x_A 73 VPEGYVFAG--RPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTH 150 (456)
T ss_dssp CCTTCCCCC--CTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHH
T ss_pred CCCcccccC--ChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHH
Confidence 544432111 1112233333332 2333444444433236999999999999999999999999999999988777655
Q ss_pred Hhhhhc---ccCCC-CCC-CCcccccCCCCCccccccccCchhhh-------hhhhHHHHHHhhhcccEEEeccccccCH
Q 011490 158 HSLSVS---KAHES-VSS-DSEYFLVPGLPDRVEITKAQLPEILK-------LKSFGEPILAAEMASYGVIVNSFEEMEP 225 (484)
Q Consensus 158 ~~~~~~---~~~~~-~~~-~~~~~~~Pg~~~~~~l~~~~l~~~~~-------~~~~~~~~~~~~~~~~~~~~~s~~~l~~ 225 (484)
.+.+.. ..... ... .....++||+++ ++.++++..+. +..++..+.+...++..+++||+.++|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~ 227 (456)
T 2c1x_A 151 VYIDEIREKIGVSGIQGREDELLNFIPGMSK---VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDD 227 (456)
T ss_dssp HTHHHHHHHHCSSCCTTCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCH
T ss_pred hhhHHHHhccCCcccccccccccccCCCCCc---ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhH
Confidence 443321 01000 011 122235788875 45555554321 2333444445556788899999999999
Q ss_pred HHHHHHHhccCCceEEeCcccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHH
Q 011490 226 AYVEEYKNARDGKVWCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDSSTRQLIELGLGLE 305 (484)
Q Consensus 226 ~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~ 305 (484)
..++.+++.+ +++++|||+....... ...++.++.+||+.++++++|||||||....+.+++.+++++++
T Consensus 228 ~~~~~~~~~~-~~~~~vGpl~~~~~~~---------~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~ 297 (456)
T 2c1x_A 228 SLTNDLKSKL-KTYLNIGPFNLITPPP---------VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALE 297 (456)
T ss_dssp HHHHHHHHHS-SCEEECCCHHHHC------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcC-CCEEEecCcccCcccc---------cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHH
Confidence 8888777766 6899999997532111 00123568899999888889999999999888899999999999
Q ss_pred hCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhHHHHHHcCCCEeccc
Q 011490 306 ATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWP 385 (484)
Q Consensus 306 ~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P 385 (484)
..+++|||+++.... .. +|+++.++. ++|+.+.+|+||.++|+|+++++||||||+||++||+++|||||++|
T Consensus 298 ~~~~~~lw~~~~~~~----~~--l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P 370 (456)
T 2c1x_A 298 ASRVPFIWSLRDKAR----VH--LPEGFLEKT-RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRP 370 (456)
T ss_dssp HHTCCEEEECCGGGG----GG--SCTTHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred hcCCeEEEEECCcch----hh--CCHHHHhhc-CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecC
Confidence 999999999986531 12 666765543 57889999999999999999999999999999999999999999999
Q ss_pred cccchhhHHHHHHHHh-cceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHhh
Q 011490 386 FFADQFCNEKLVVQVL-RIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEE 464 (484)
Q Consensus 386 ~~~DQ~~na~~~~e~~-G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~ 464 (484)
++.||+.||++++ +. |+|+.++.. .+++++|.++|+++|+|++ +++||+||+++++.+++++.+
T Consensus 371 ~~~dQ~~Na~~l~-~~~g~g~~l~~~-------------~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~l~~~~~~a~~~ 435 (456)
T 2c1x_A 371 FFGDQRLNGRMVE-DVLEIGVRIEGG-------------VFTKSGLMSCFDQILSQEK-GKKLRENLRALRETADRAVGP 435 (456)
T ss_dssp CSTTHHHHHHHHH-HTSCCEEECGGG-------------SCCHHHHHHHHHHHHHSHH-HHHHHHHHHHHHHHHHHHTST
T ss_pred ChhhHHHHHHHHH-HHhCeEEEecCC-------------CcCHHHHHHHHHHHHCCCc-HHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999995 76 999999765 6999999999999998754 779999999999999999999
Q ss_pred CCChHHHHHHHHHHHHh
Q 011490 465 GGSSYLNIKLLIKDILQ 481 (484)
Q Consensus 465 gg~~~~~~~~~~~~~~~ 481 (484)
|||+..++++|++.+.+
T Consensus 436 gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 436 KGSSTENFITLVDLVSK 452 (456)
T ss_dssp TCHHHHHHHHHHHHHTS
T ss_pred CCcHHHHHHHHHHHHHh
Confidence 99999999999998853
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=6.8e-61 Score=485.15 Aligned_cols=434 Identities=26% Similarity=0.427 Sum_probs=324.1
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHC--CCeEEEEeCCCchh-hhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQH--GALVTIVTTPMNAA-RFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCE 84 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~r--Gh~V~~~~~~~~~~-~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~ 84 (484)
++||+++|+|++||++|++.||++|++| ||+|||++++.+.+ .+.+.+......+.+++|+.+|... +++ .+
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~----~~~-~~ 83 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVE----PPP-QE 83 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCC----CCC-GG
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCC----CCc-cc
Confidence 7899999999999999999999999999 99999999887531 1222222111123479999987431 221 11
Q ss_pred ccCCCCccchHHHHHHHHHHchHHHHHHHHhc-CCCCeEEEecCCCcchHHHHHHcCCCcEEEecchHHHHHHHHhhhhc
Q 011490 85 SWDKLPSMALLPKFFAAIEMLRLPLETLFKEI-QPKPSCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCLLCLHSLSVS 163 (484)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~D~vI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 163 (484)
.. ...... +........+.+++++++. ..++|+||+|.++.|+..+|+++|||++.+++++++.+..+.+.+..
T Consensus 84 ~~---~~~~~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 158 (463)
T 2acv_A 84 LL---KSPEFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNR 158 (463)
T ss_dssp GG---GSHHHH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGS
T ss_pred cc---CCccHH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhh
Confidence 00 111111 4444456667778887752 35899999999999999999999999999999999888777666543
Q ss_pred ccCCCCCCCCc---ccccCCC-CCccccccccCchhhh----hhhhHHHHHHhhhcccEEEeccccccCHHHHHHHHhcc
Q 011490 164 KAHESVSSDSE---YFLVPGL-PDRVEITKAQLPEILK----LKSFGEPILAAEMASYGVIVNSFEEMEPAYVEEYKNAR 235 (484)
Q Consensus 164 ~~~~~~~~~~~---~~~~Pg~-~~~~~l~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~ 235 (484)
........... +..+||+ ++ ++.++++..+. ....+....+..+++.++++||+.++++...+.+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~pg~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~ 235 (463)
T 2acv_A 159 QIEEVFDDSDRDHQLLNIPGISNQ---VPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHD 235 (463)
T ss_dssp CTTCCCCCSSGGGCEECCTTCSSC---EEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHC
T ss_pred cccCCCCCccccCceeECCCCCCC---CChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhcc
Confidence 21111111122 4567888 54 44444443321 11222233445567788899999999998877776655
Q ss_pred --CCceEEeCcccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCc-cCCHHHHHHHHHHHHhCCCCEE
Q 011490 236 --DGKVWCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLC-DSSTRQLIELGLGLEATKKPFI 312 (484)
Q Consensus 236 --~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i 312 (484)
++++++|||+......... .. .+..+.++.+||+.++++++|||||||+. ..+.+++.+++.+++..+++||
T Consensus 236 ~p~~~v~~vGpl~~~~~~~~~----~~-~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l 310 (463)
T 2acv_A 236 EKIPPIYAVGPLLDLKGQPNP----KL-DQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFL 310 (463)
T ss_dssp TTSCCEEECCCCCCSSCCCBT----TB-CHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred ccCCcEEEeCCCccccccccc----cc-ccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEE
Confidence 5799999999754310000 00 00124578899999888889999999999 7888889999999999999999
Q ss_pred EEEeCCCCCCCchhhhhhhHHHHHhc-CCCeEeeCcCChhhhcCCCCccccccccchhhHHHHHHcCCCEeccccccchh
Q 011490 313 WVIRPGDQAKGLEDWLLAEKFEERIE-GRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQF 391 (484)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~~~~~~~~-~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~ 391 (484)
|+++.+. .. +|+++.++.. ++|+.+.+|+||.++|+|+++++||||||+||++|++++|||||++|++.||+
T Consensus 311 ~~~~~~~-----~~--l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~ 383 (463)
T 2acv_A 311 WSNSAEK-----KV--FPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQ 383 (463)
T ss_dssp EECCCCG-----GG--SCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHH
T ss_pred EEECCCc-----cc--CChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhH
Confidence 9998741 11 6666655541 45788889999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhcceeEe-ccCCCCCCcccccCCC--ccCHHHHHHHHHHHhc-CChhHHHHHHHHHHHHHHHHHHHhhCCC
Q 011490 392 CNEKLVVQVLRIGVTI-GAERPPSLADEERNGV--PVKKEDVKKAINMLMD-EGEERDERRRRAREYGETAKTAIEEGGS 467 (484)
Q Consensus 392 ~na~~~~e~~G~g~~l-~~~~~~~~~~~~~~~~--~~~~~~l~~ai~~vl~-~~~~~~~~r~~a~~l~~~~~~~~~~gg~ 467 (484)
.||+++++++|+|+.+ +..+ ++ .+++++|.++|+++|+ ++ +||+||+++++.+++++.+|||
T Consensus 384 ~Na~~lv~~~g~g~~l~~~~~----------~~~~~~~~~~l~~ai~~ll~~~~----~~r~~a~~l~~~~~~a~~~gGs 449 (463)
T 2acv_A 384 LNAFRLVKEWGVGLGLRVDYR----------KGSDVVAAEEIEKGLKDLMDKDS----IVHKKVQEMKEMSRNAVVDGGS 449 (463)
T ss_dssp HHHHHHHHTSCCEEESCSSCC----------TTCCCCCHHHHHHHHHHHTCTTC----THHHHHHHHHHHHHHHTSTTSH
T ss_pred HHHHHHHHHcCeEEEEecccC----------CCCccccHHHHHHHHHHHHhccH----HHHHHHHHHHHHHHHHHhcCCc
Confidence 9999942699999999 3110 12 4899999999999997 35 8999999999999999999999
Q ss_pred hHHHHHHHHHHHH
Q 011490 468 SYLNIKLLIKDIL 480 (484)
Q Consensus 468 ~~~~~~~~~~~~~ 480 (484)
+..++++|++.+.
T Consensus 450 s~~~l~~~v~~~~ 462 (463)
T 2acv_A 450 SLISVGKLIDDIT 462 (463)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999885
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.3e-45 Score=368.38 Aligned_cols=388 Identities=18% Similarity=0.217 Sum_probs=260.2
Q ss_pred CCCCCCC----CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCcc
Q 011490 1 MASQAGS----QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQE 76 (484)
Q Consensus 1 m~~~~~~----~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~ 76 (484)
|+++++| .+||+|++++++||++|++.||++|+++||+|+|++++.+.+.+.+. +++|+.++..
T Consensus 1 ~~~~~~~~~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~--- 68 (424)
T 2iya_A 1 MTSEHRSASVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDSI--- 68 (424)
T ss_dssp ----------CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCCC---
T ss_pred CCcccccCCcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCcc---
Confidence 5555443 47999999999999999999999999999999999998776666555 6788877632
Q ss_pred CCCCCCCCccCCCC-c-cchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCCcchHHHHHHcCCCcEEEecchHHHH
Q 011490 77 VGLPEGCESWDKLP-S-MALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCL 154 (484)
Q Consensus 77 ~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~ 154 (484)
++.......... . ...+..+........+.+.+++++ .+||+||+|.++.|+..+|+++|||++.+++.+....
T Consensus 69 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~ 144 (424)
T 2iya_A 69 --LPKESNPEESWPEDQESAMGLFLDEAVRVLPQLEDAYAD--DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYE 144 (424)
T ss_dssp --SCCTTCTTCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTT--SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCT
T ss_pred --ccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccc
Confidence 222111100001 1 111222233334455677777777 8999999999888999999999999999987664111
Q ss_pred HHHHhhhhcccCCCCCCCCcccccC-CCCCccccccccCchhhhhhhhHHHHH----------HhhhcccEEEecccccc
Q 011490 155 LCLHSLSVSKAHESVSSDSEYFLVP-GLPDRVEITKAQLPEILKLKSFGEPIL----------AAEMASYGVIVNSFEEM 223 (484)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~P-g~~~~~~l~~~~l~~~~~~~~~~~~~~----------~~~~~~~~~~~~s~~~l 223 (484)
......... .....+. ......| +......+.. ..+....+...+.... .........+.++..++
T Consensus 145 ~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l 221 (424)
T 2iya_A 145 GFEEDVPAV-QDPTADR-GEEAAAPAGTGDAEEGAE-AEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTF 221 (424)
T ss_dssp THHHHSGGG-SCCCC-----------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTT
T ss_pred ccccccccc-ccccccc-ccccccccccccchhhhc-cchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhh
Confidence 000000000 0000000 0000000 0000000000 0000000001111111 11124556788888888
Q ss_pred CHHHHHHHHhccCCceEEeCcccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHH
Q 011490 224 EPAYVEEYKNARDGKVWCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDSSTRQLIELGLG 303 (484)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~a 303 (484)
+++ ...+++++++|||+.... ....+|++..+++++|||++||......+.+..++++
T Consensus 222 ~~~-----~~~~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~a 279 (424)
T 2iya_A 222 QIK-----GDTVGDNYTFVGPTYGDR-----------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSA 279 (424)
T ss_dssp STT-----GGGCCTTEEECCCCCCCC-----------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHH
T ss_pred CCC-----ccCCCCCEEEeCCCCCCc-----------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHH
Confidence 753 245778999999975421 1123677666667799999999986667888899999
Q ss_pred HHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhHHHHHHcCCCEec
Q 011490 304 LEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVT 383 (484)
Q Consensus 304 l~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~ 383 (484)
++..+++++|.++.+.....+.. .++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|+
T Consensus 280 l~~~~~~~~~~~g~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~ 346 (424)
T 2iya_A 280 VDGLDWHVVLSVGRFVDPADLGE-----------VPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVA 346 (424)
T ss_dssp HTTCSSEEEEECCTTSCGGGGCS-----------CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEE
T ss_pred HhcCCcEEEEEECCcCChHHhcc-----------CCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEE
Confidence 99889999999886532111111 2569999999999999999998 9999999999999999999999
Q ss_pred cccccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHH
Q 011490 384 WPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKT 460 (484)
Q Consensus 384 ~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~ 460 (484)
+|...||+.||+++ ++.|+|+.++.. .+++++|.++|+++++|+ +++++++++++.+++
T Consensus 347 ~p~~~dQ~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 347 VPQIAEQTMNAERI-VELGLGRHIPRD-------------QVTAEKLREAVLAVASDP----GVAERLAAVRQEIRE 405 (424)
T ss_dssp CCCSHHHHHHHHHH-HHTTSEEECCGG-------------GCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHT
T ss_pred ecCccchHHHHHHH-HHCCCEEEcCcC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh
Confidence 99999999999999 599999999876 689999999999999988 899999999998773
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=6.5e-44 Score=356.19 Aligned_cols=362 Identities=17% Similarity=0.170 Sum_probs=231.5
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccC--CCCCCCCc
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEV--GLPEGCES 85 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~--~~~~~~~~ 85 (484)
.|||||+++|++||++|+++||++|++|||+|+|++++.+.... +. ++.+..+....... ..+.....
T Consensus 22 ~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~-~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 91 (400)
T 4amg_A 22 SMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVA-EA---------GLCAVDVSPGVNYAKLFVPDDTDV 91 (400)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHH-TT---------TCEEEESSTTCCSHHHHSCCC---
T ss_pred CCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHH-hc---------CCeeEecCCchhHhhhcccccccc
Confidence 78999999999999999999999999999999999988655422 21 46666653221110 00111111
Q ss_pred cCCCCc----cchH-HHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCCcchHHHHHHcCCCcEEEecchHHHHHHHHhh
Q 011490 86 WDKLPS----MALL-PKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCLLCLHSL 160 (484)
Q Consensus 86 ~~~~~~----~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~ 160 (484)
...... ...+ ..+..........+.+++++ ++||+||+|.++.++..+|+.+|||++.+...+.....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~----- 164 (400)
T 4amg_A 92 TDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS--WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEP----- 164 (400)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCH-----
T ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEECcchHHHHHHHHHcCCCceeeccccccccc-----
Confidence 000000 0111 11122223445566777788 89999999999999999999999999986443211110
Q ss_pred hhcccCCCCCCCCcccccCCCCCccccccccCchhhhhhhhHHHHHHhhh----cccEEEeccccccCHHHHHHHH-h-c
Q 011490 161 SVSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAEM----ASYGVIVNSFEEMEPAYVEEYK-N-A 234 (484)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~Pg~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~l~~~~~~~~~-~-~ 234 (484)
++. .. ..+.+........ .......... +....... . .
T Consensus 165 -------------------~~~-----------~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 208 (400)
T 4amg_A 165 -------------------GLG-----------AL--IRRAMSKDYERHGVTGEPTGSVRLTTT----PPSVEALLPEDR 208 (400)
T ss_dssp -------------------HHH-----------HH--HHHHTHHHHHHTTCCCCCSCEEEEECC----CHHHHHTSCGGG
T ss_pred -------------------chh-----------hH--HHHHHHHHHHHhCCCcccccchhhccc----CchhhccCcccc
Confidence 000 00 0001111111000 0011111111 11110000 0 0
Q ss_pred cCCceEEeCcccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCccCC--HHHHHHHHHHHHhCCCCEE
Q 011490 235 RDGKVWCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDSS--TRQLIELGLGLEATKKPFI 312 (484)
Q Consensus 235 ~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~--~~~~~~~~~al~~~~~~~i 312 (484)
..+..+.+.+... .....+.+|++..+++++||||+||+...+ .+.+..+++++++.+.+++
T Consensus 209 ~~~~~~~~~~~~~----------------~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v 272 (400)
T 4amg_A 209 RSPGAWPMRYVPY----------------NGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFV 272 (400)
T ss_dssp CCTTCEECCCCCC----------------CCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEE
T ss_pred cCCcccCcccccc----------------cccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEE
Confidence 0122222222111 113455679988888899999999987644 3567889999999999999
Q ss_pred EEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhHHHHHHcCCCEeccccccchhh
Q 011490 313 WVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFC 392 (484)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~ 392 (484)
|..++..... ... .++|+.+.+|+||.++|+|+++ ||||||+||++||+++|||+|++|++.||+.
T Consensus 273 ~~~~~~~~~~-~~~-----------~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~ 338 (400)
T 4amg_A 273 LTLGGGDLAL-LGE-----------LPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDT 338 (400)
T ss_dssp EECCTTCCCC-CCC-----------CCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHH
T ss_pred EEecCccccc-ccc-----------CCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHH
Confidence 9987764321 111 2579999999999999999998 9999999999999999999999999999999
Q ss_pred HHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHH
Q 011490 393 NEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNI 472 (484)
Q Consensus 393 na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~ 472 (484)
||+++ ++.|+|+.++.. +.+++ +|+++|+|+ +||+||+++++++++. .| .
T Consensus 339 na~~v-~~~G~g~~l~~~-------------~~~~~----al~~lL~d~----~~r~~a~~l~~~~~~~---~~-----~ 388 (400)
T 4amg_A 339 NRDVL-TGLGIGFDAEAG-------------SLGAE----QCRRLLDDA----GLREAALRVRQEMSEM---PP-----P 388 (400)
T ss_dssp HHHHH-HHHTSEEECCTT-------------TCSHH----HHHHHHHCH----HHHHHHHHHHHHHHTS---CC-----H
T ss_pred HHHHH-HHCCCEEEcCCC-------------CchHH----HHHHHHcCH----HHHHHHHHHHHHHHcC---CC-----H
Confidence 99999 599999999876 46655 566788888 9999999999998844 44 3
Q ss_pred HHHHHHHHhh
Q 011490 473 KLLIKDILQQ 482 (484)
Q Consensus 473 ~~~~~~~~~~ 482 (484)
.+.++.|++.
T Consensus 389 ~~~a~~le~l 398 (400)
T 4amg_A 389 AETAAXLVAL 398 (400)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 4444555444
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.2e-41 Score=341.42 Aligned_cols=356 Identities=16% Similarity=0.121 Sum_probs=239.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCCccCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESWDK 88 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (484)
|||+|++.++.||++|+++||++|++|||+|+|++++...+.+... +++|+.++....+ .+ ... ..
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~i~~~~~~-~~-~~~---~~ 66 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV---------GVPHVPVGPSARA-PI-QRA---KP 66 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEECCC---------CC---SC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc---------CCeeeeCCCCHHH-Hh-hcc---cc
Confidence 5899999999999999999999999999999999998755544443 6888888743211 11 100 00
Q ss_pred CCccchHHHHHHHHH-HchHHHHHHHHhcCCCCeEEEecC-CCcc--hHHHHHHcCCCcEEEecchHHHHHHHHhhhhcc
Q 011490 89 LPSMALLPKFFAAIE-MLRLPLETLFKEIQPKPSCLISDV-CLPW--TVSSACKFNVPRIVFHGFSCFCLLCLHSLSVSK 164 (484)
Q Consensus 89 ~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~D~vI~D~-~~~~--a~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~ 164 (484)
... ..+..... .....++++.+. ..+||+||+|. +..+ +..+|+++|||++.+++.+.+...
T Consensus 67 --~~~--~~~~~~~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~--------- 132 (415)
T 1iir_A 67 --LTA--EDVRRFTTEAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS--------- 132 (415)
T ss_dssp --CCH--HHHHHHHHHHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC---------
T ss_pred --cch--HHHHHHHHHHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC---------
Confidence 101 11111111 122334444431 27999999998 6677 889999999999998877633210
Q ss_pred cCCCCCCCCcccccCCCCCccccccc----cCchh-hh------hhhhHHHHHHh------------hhcccEEEecccc
Q 011490 165 AHESVSSDSEYFLVPGLPDRVEITKA----QLPEI-LK------LKSFGEPILAA------------EMASYGVIVNSFE 221 (484)
Q Consensus 165 ~~~~~~~~~~~~~~Pg~~~~~~l~~~----~l~~~-~~------~~~~~~~~~~~------------~~~~~~~~~~s~~ 221 (484)
.++|.....+.++.+ .+... .. +......+... .... ..+.++.+
T Consensus 133 -----------~~~p~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~ 200 (415)
T 1iir_A 133 -----------PYYPPPPLGEPSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADP 200 (415)
T ss_dssp -----------SSSCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCT
T ss_pred -----------cccCCccCCccccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeCh
Confidence 001100000001000 00000 00 00001111111 1112 45777777
Q ss_pred ccCHHHHHHHHhccCCceEEeCcccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCccCCHHHHHHHH
Q 011490 222 EMEPAYVEEYKNARDGKVWCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDSSTRQLIELG 301 (484)
Q Consensus 222 ~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~ 301 (484)
.+++. .+..+ ++++|||+...... ..+.++.+|++.++ ++|||++||+. ...+.+..++
T Consensus 201 ~l~~~----~~~~~--~~~~vG~~~~~~~~------------~~~~~~~~~l~~~~--~~v~v~~Gs~~-~~~~~~~~~~ 259 (415)
T 1iir_A 201 VLAPL----QPTDL--DAVQTGAWILPDER------------PLSPELAAFLDAGP--PPVYLGFGSLG-APADAVRVAI 259 (415)
T ss_dssp TTSCC----CCCSS--CCEECCCCCCCCCC------------CCCHHHHHHHHTSS--CCEEEECC----CCHHHHHHHH
T ss_pred hhcCC----CcccC--CeEeeCCCccCccc------------CCCHHHHHHHhhCC--CeEEEeCCCCC-CcHHHHHHHH
Confidence 77631 11222 78999998654211 12567889997653 58999999987 5677788899
Q ss_pred HHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhHHHHHHcCCCE
Q 011490 302 LGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPM 381 (484)
Q Consensus 302 ~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~ 381 (484)
++++..+.+++|+++.+... ... + ++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+
T Consensus 260 ~al~~~~~~~v~~~g~~~~~--~~~--~---------~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~ 324 (415)
T 1iir_A 260 DAIRAHGRRVILSRGWADLV--LPD--D---------GADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQ 324 (415)
T ss_dssp HHHHHTTCCEEECTTCTTCC--CSS--C---------GGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCE
T ss_pred HHHHHCCCeEEEEeCCCccc--ccC--C---------CCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCE
Confidence 99999999999998765321 111 2 358999999999999988888 99999999999999999999
Q ss_pred eccccccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHH
Q 011490 382 VTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAK 459 (484)
Q Consensus 382 l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~ 459 (484)
|++|...||+.||+++ ++.|+|+.++.. .+++++|.++|+++ +|+ ++++++++++++++
T Consensus 325 i~~p~~~dQ~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~ 383 (415)
T 1iir_A 325 ILLPQMADQPYYAGRV-AELGVGVAHDGP-------------IPTFDSLSAALATA-LTP----ETHARATAVAGTIR 383 (415)
T ss_dssp EECCCSTTHHHHHHHH-HHHTSEEECSSS-------------SCCHHHHHHHHHHH-TSH----HHHHHHHHHHHHSC
T ss_pred EECCCCCccHHHHHHH-HHCCCcccCCcC-------------CCCHHHHHHHHHHH-cCH----HHHHHHHHHHHHHh
Confidence 9999999999999999 699999999866 58999999999999 887 89999999888865
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=7.9e-40 Score=328.28 Aligned_cols=366 Identities=14% Similarity=0.119 Sum_probs=251.2
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCC--c
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCE--S 85 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~--~ 85 (484)
.+||+|+++++.||++|+++||++|+++||+|+|++++.+.+.+... ++++..++.+. +.... .
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~~-----~~~~~~~~ 85 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA---------GATVVPYQSEI-----IDADAAEV 85 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCST-----TTCCHHHH
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc---------CCEEEeccccc-----cccccchh
Confidence 57999999999999999999999999999999999988766665554 68888876321 11100 0
Q ss_pred cCCCCccchHHH-HHHHHHHchHHHHHHHHhcCCCCeEEEec-CCCcchHHHHHHcCCCcEEEecchHHHHHHHHhhhhc
Q 011490 86 WDKLPSMALLPK-FFAAIEMLRLPLETLFKEIQPKPSCLISD-VCLPWTVSSACKFNVPRIVFHGFSCFCLLCLHSLSVS 163 (484)
Q Consensus 86 ~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~D~vI~D-~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 163 (484)
.........+.. +..........+.+++++ ++||+||+| ....++..+|+++|||++.+.+....... +...+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~- 161 (415)
T 3rsc_A 86 FGSDDLGVRPHLMYLRENVSVLRATAEALDG--DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSFSQD- 161 (415)
T ss_dssp HHSSSSCHHHHHHHHHHHHHHHHHHHHHHSS--SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCHHHH-
T ss_pred hccccHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-cccccc-
Confidence 000011112222 333334455677788888 999999999 67778899999999999997643211000 000000
Q ss_pred ccCCCCCCCCcccccCCCCCccccccccCchhhh-hhhhHHHH------HHhhhcc-cEEEeccccccCHHHHHHHHhcc
Q 011490 164 KAHESVSSDSEYFLVPGLPDRVEITKAQLPEILK-LKSFGEPI------LAAEMAS-YGVIVNSFEEMEPAYVEEYKNAR 235 (484)
Q Consensus 164 ~~~~~~~~~~~~~~~Pg~~~~~~l~~~~l~~~~~-~~~~~~~~------~~~~~~~-~~~~~~s~~~l~~~~~~~~~~~~ 235 (484)
..+...+..|. ...++.. +..+.... ....... ...+......++ .....+
T Consensus 162 ---------~~~~~~~~~p~-------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~ 220 (415)
T 3rsc_A 162 ---------MVTLAGTIDPL-------DLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQ-----IAGDTF 220 (415)
T ss_dssp ---------HHHHHTCCCGG-------GCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTS-----TTGGGC
T ss_pred ---------cccccccCChh-------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccC-----CCcccC
Confidence 00000000000 0000000 01111000 0011111 444444444443 344566
Q ss_pred CCceEEeCcccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCCEEEEE
Q 011490 236 DGKVWCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDSSTRQLIELGLGLEATKKPFIWVI 315 (484)
Q Consensus 236 ~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~ 315 (484)
+.++.++||+.... .+..+|....+++++|||++||......+.+..+++++++.+.+++|.+
T Consensus 221 ~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~ 283 (415)
T 3rsc_A 221 DDRFVFVGPCFDDR-----------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTL 283 (415)
T ss_dssp CTTEEECCCCCCCC-----------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEEC
T ss_pred CCceEEeCCCCCCc-----------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEe
Confidence 78899999976432 1223455545567799999999987777888889999999899999998
Q ss_pred eCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhHHHHHHcCCCEeccccccchhhHHH
Q 011490 316 RPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEK 395 (484)
Q Consensus 316 ~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 395 (484)
+.+.....+.. .++|+.+.+|+|+.++|+++++ +|||||+||++||+++|+|+|++|...||+.||.
T Consensus 284 g~~~~~~~l~~-----------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~ 350 (415)
T 3rsc_A 284 GGQVDPAALGD-----------LPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMAR 350 (415)
T ss_dssp TTTSCGGGGCC-----------CCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHH
T ss_pred CCCCChHHhcC-----------CCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHH
Confidence 86532221111 2569999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHH
Q 011490 396 LVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKT 460 (484)
Q Consensus 396 ~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~ 460 (484)
++ ++.|+|+.+... .+++++|.++|+++++|+ +++++++++++.+.+
T Consensus 351 ~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~ 397 (415)
T 3rsc_A 351 RV-DQLGLGAVLPGE-------------KADGDTLLAAVGAVAADP----ALLARVEAMRGHVRR 397 (415)
T ss_dssp HH-HHHTCEEECCGG-------------GCCHHHHHHHHHHHHTCH----HHHHHHHHHHHHHHH
T ss_pred HH-HHcCCEEEcccC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh
Confidence 99 599999999877 689999999999999998 889999888888763
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.7e-40 Score=333.09 Aligned_cols=355 Identities=14% Similarity=0.071 Sum_probs=242.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCCccCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESWDK 88 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (484)
|||+|++.++.||++|+++||++|+++||+|+|++++...+.+... +++|+.++..... .+.. . ..
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~-~~~~-~--~~- 66 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHM-MLQE-G--MP- 66 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGG-CCCT-T--SC-
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHH-HHhh-c--cc-
Confidence 5899999999999999999999999999999999998766555554 6888887643211 1111 0 00
Q ss_pred CCccchHHHHHHHHHHc-hHHHHHHHHhcCCCCeEEEecC-CCcc--hHHHHHHcCCCcEEEecchHHHHHHHHhhhhcc
Q 011490 89 LPSMALLPKFFAAIEML-RLPLETLFKEIQPKPSCLISDV-CLPW--TVSSACKFNVPRIVFHGFSCFCLLCLHSLSVSK 164 (484)
Q Consensus 89 ~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~D~vI~D~-~~~~--a~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~ 164 (484)
.... ..+....... ...++.+.+. ..+||+||+|. +.++ +..+|+++|||++.+.+.+.+...
T Consensus 67 -~~~~--~~~~~~~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~--------- 133 (416)
T 1rrv_A 67 -PPPP--EEEQRLAAMTVEMQFDAVPGA-AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS--------- 133 (416)
T ss_dssp -CCCH--HHHHHHHHHHHHHHHHHHHHH-TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC---------
T ss_pred -cchh--HHHHHHHHHHHHHHHHHHHHH-hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC---------
Confidence 0101 0111111112 2222222211 27999999997 4456 788999999999998776532210
Q ss_pred cCCCCCCCCcccccC-CCCCcccc-ccccCchhh----h---h---hhhHHHHH------------HhhhcccEEEeccc
Q 011490 165 AHESVSSDSEYFLVP-GLPDRVEI-TKAQLPEIL----K---L---KSFGEPIL------------AAEMASYGVIVNSF 220 (484)
Q Consensus 165 ~~~~~~~~~~~~~~P-g~~~~~~l-~~~~l~~~~----~---~---~~~~~~~~------------~~~~~~~~~~~~s~ 220 (484)
.++| ..+ +.+ +.+...... . + ......+. +..... .++.++.
T Consensus 134 -----------~~~p~~~~--~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~ 199 (416)
T 1rrv_A 134 -----------PHLPPAYD--EPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAAD 199 (416)
T ss_dssp -----------SSSCCCBC--SCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSC
T ss_pred -----------cccCCCCC--CCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccC
Confidence 0111 110 001 000000000 0 0 00011111 111122 4677888
Q ss_pred cccCHHHHHHHHhccCCceEEeCcccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCcc-CCHHHHHH
Q 011490 221 EEMEPAYVEEYKNARDGKVWCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCD-SSTRQLIE 299 (484)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~ 299 (484)
++++++ +..+ ++++|||+...... ..+.++.+|++.++ ++|||++||... ...+.+..
T Consensus 200 ~~l~~~-----~~~~--~~~~vG~~~~~~~~------------~~~~~~~~~l~~~~--~~v~v~~Gs~~~~~~~~~~~~ 258 (416)
T 1rrv_A 200 PVLAPL-----QPDV--DAVQTGAWLLSDER------------PLPPELEAFLAAGS--PPVHIGFGSSSGRGIADAAKV 258 (416)
T ss_dssp TTTSCC-----CSSC--CCEECCCCCCCCCC------------CCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHH
T ss_pred ccccCC-----CCCC--CeeeECCCccCccC------------CCCHHHHHHHhcCC--CeEEEecCCCCccChHHHHHH
Confidence 777642 1122 78999998654211 12567888987653 589999999865 34566778
Q ss_pred HHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhHHHHHHcCC
Q 011490 300 LGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGL 379 (484)
Q Consensus 300 ~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~Gv 379 (484)
++++++..+.+++|+++.+... ... .++|+.+.+|+||.++|+++++ ||||||+||++||+++||
T Consensus 259 ~~~al~~~~~~~v~~~g~~~~~--~~~-----------~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~ 323 (416)
T 1rrv_A 259 AVEAIRAQGRRVILSRGWTELV--LPD-----------DRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGV 323 (416)
T ss_dssp HHHHHHHTTCCEEEECTTTTCC--CSC-----------CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTC
T ss_pred HHHHHHHCCCeEEEEeCCcccc--ccC-----------CCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCC
Confidence 9999999999999998875321 111 2468999999999999988888 999999999999999999
Q ss_pred CEeccccccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHH
Q 011490 380 PMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAK 459 (484)
Q Consensus 380 P~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~ 459 (484)
|+|++|...||+.||+++ ++.|+|+.++.. .+++++|.++|+++ +|+ ++++++++++++++
T Consensus 324 P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~ 384 (416)
T 1rrv_A 324 PQLVIPRNTDQPYFAGRV-AALGIGVAHDGP-------------TPTFESLSAALTTV-LAP----ETRARAEAVAGMVL 384 (416)
T ss_dssp CEEECCCSBTHHHHHHHH-HHHTSEEECSSS-------------CCCHHHHHHHHHHH-TSH----HHHHHHHHHTTTCC
T ss_pred CEEEccCCCCcHHHHHHH-HHCCCccCCCCC-------------CCCHHHHHHHHHHh-hCH----HHHHHHHHHHHHHh
Confidence 999999999999999999 599999999876 58999999999999 887 89999998888766
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=7.1e-39 Score=319.80 Aligned_cols=378 Identities=17% Similarity=0.183 Sum_probs=253.7
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCCccCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESWDK 88 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (484)
+||+|+++++.||++|++.||++|+++||+|+|++++.+.+.+... ++++..++.+... . ........
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~--~-~~~~~~~~ 72 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA---------GAEVVLYKSEFDT--F-HVPEVVKQ 72 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT---------TCEEEECCCGGGT--S-SSSSSSCC
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc---------CCEEEeccccccc--c-cccccccc
Confidence 4999999999999999999999999999999999987655555443 6888887642111 0 00000000
Q ss_pred CCccchHHH-HHHHHHHchHHHHHHHHhcCCCCeEEEec-CCCcchHHHHHHcCCCcEEEecchHHHHHHHHhhhhcccC
Q 011490 89 LPSMALLPK-FFAAIEMLRLPLETLFKEIQPKPSCLISD-VCLPWTVSSACKFNVPRIVFHGFSCFCLLCLHSLSVSKAH 166 (484)
Q Consensus 89 ~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~D~vI~D-~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~ 166 (484)
......+.. +..........+.+++++ ++||+||+| ....++..+|+++|||++.+.+....... +...
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~------ 143 (402)
T 3ia7_A 73 EDAETQLHLVYVRENVAILRAAEEALGD--NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH-YSLF------ 143 (402)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHTT--CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT-BCHH------
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc-cccc------
Confidence 011111222 223333455677788888 999999999 67778899999999999987543211000 0000
Q ss_pred CCCCCCCcccccCCCCCccccccccCchhhh-hhhhHHHHH----------Hhhhcc-cEEEeccccccCHHHHHHHHhc
Q 011490 167 ESVSSDSEYFLVPGLPDRVEITKAQLPEILK-LKSFGEPIL----------AAEMAS-YGVIVNSFEEMEPAYVEEYKNA 234 (484)
Q Consensus 167 ~~~~~~~~~~~~Pg~~~~~~l~~~~l~~~~~-~~~~~~~~~----------~~~~~~-~~~~~~s~~~l~~~~~~~~~~~ 234 (484)
|.+.+ ......+..+. +...+.... ...... +..+.....+++ .....
T Consensus 144 ------------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~ 203 (402)
T 3ia7_A 144 ------------KELWK---SNGQRHPADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQ-----PFAET 203 (402)
T ss_dssp ------------HHHHH---HHTCCCGGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGS-----TTGGG
T ss_pred ------------ccccc---cccccChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhC-----Ccccc
Confidence 00000 00000000000 000011110 111111 333444433333 33455
Q ss_pred cCCceEEeCcccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCCEEEE
Q 011490 235 RDGKVWCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDSSTRQLIELGLGLEATKKPFIWV 314 (484)
Q Consensus 235 ~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 314 (484)
++.++.++||+.... .....|+...+++++||+++||......+.+..++++++..+.+++|.
T Consensus 204 ~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (402)
T 3ia7_A 204 FDERFAFVGPTLTGR-----------------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMA 266 (402)
T ss_dssp CCTTEEECCCCCCC---------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEE
T ss_pred CCCCeEEeCCCCCCc-----------------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEE
Confidence 678899999976432 122345554556679999999998877778889999999889999998
Q ss_pred EeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhHHHHHHcCCCEecccc-ccchhhH
Q 011490 315 IRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPF-FADQFCN 393 (484)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~-~~DQ~~n 393 (484)
++.+.....+.. .++|+.+.+|+|+.++|+++++ +|||||+||++||+++|+|+|++|. ..||+.|
T Consensus 267 ~g~~~~~~~~~~-----------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~ 333 (402)
T 3ia7_A 267 IGGFLDPAVLGP-----------LPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPS 333 (402)
T ss_dssp CCTTSCGGGGCS-----------CCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHH
T ss_pred eCCcCChhhhCC-----------CCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHH
Confidence 886532221111 2569999999999999999999 9999999999999999999999999 9999999
Q ss_pred HHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHH
Q 011490 394 EKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIK 473 (484)
Q Consensus 394 a~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~ 473 (484)
+.++ ++.|+|+.+..+ .+++++|.++|.++++|+ +++++++++++.+. ++++....++
T Consensus 334 a~~~-~~~g~g~~~~~~-------------~~~~~~l~~~~~~ll~~~----~~~~~~~~~~~~~~----~~~~~~~~~~ 391 (402)
T 3ia7_A 334 AERV-IELGLGSVLRPD-------------QLEPASIREAVERLAADS----AVRERVRRMQRDIL----SSGGPARAAD 391 (402)
T ss_dssp HHHH-HHTTSEEECCGG-------------GCSHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH----TSCHHHHHHH
T ss_pred HHHH-HHcCCEEEccCC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHh----hCChHHHHHH
Confidence 9999 599999999877 689999999999999988 88888888888765 2344444444
Q ss_pred HHHHHH
Q 011490 474 LLIKDI 479 (484)
Q Consensus 474 ~~~~~~ 479 (484)
.+.+.+
T Consensus 392 ~i~~~~ 397 (402)
T 3ia7_A 392 EVEAYL 397 (402)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444433
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=6.6e-40 Score=327.20 Aligned_cols=352 Identities=15% Similarity=0.078 Sum_probs=239.9
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCCccCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESWDK 88 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (484)
|||+|++.++.||++|+++||++|++|||+|+|++++...+.+++. +++|..++.+... . .....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~--~-~~~~~--- 65 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRA--G-AREPG--- 65 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSG--G-GSCTT---
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHH--H-hcccc---
Confidence 5899999999999999999999999999999999988766666555 6888888643221 1 00000
Q ss_pred CCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCCcch---HHHHHHcCCCcEEEecchHHHHHHHHhhhhccc
Q 011490 89 LPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCLPWT---VSSACKFNVPRIVFHGFSCFCLLCLHSLSVSKA 165 (484)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a---~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~ 165 (484)
.........+..........+.+++ .+||+||+|..+..+ ..+|+++|||++.+..++.....
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~l~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~---------- 131 (404)
T 3h4t_A 66 ELPPGAAEVVTEVVAEWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPS---------- 131 (404)
T ss_dssp CCCTTCGGGHHHHHHHHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGG----------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCC----------
Confidence 0011122223333333444444443 379999999765433 78999999999988766532100
Q ss_pred CCCCCCCCcccccCCCCCccccccccCchhhhhhhhHHHHHHhh-----------hcccEEEeccccccCHHHHHHHHhc
Q 011490 166 HESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAE-----------MASYGVIVNSFEEMEPAYVEEYKNA 234 (484)
Q Consensus 166 ~~~~~~~~~~~~~Pg~~~~~~l~~~~l~~~~~~~~~~~~~~~~~-----------~~~~~~~~~s~~~l~~~~~~~~~~~ 234 (484)
+.......+........ +..........+ ......+.+..+.+.+. +.
T Consensus 132 -------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~------~~ 190 (404)
T 3h4t_A 132 -------------EQSQAERDMYNQGADRL--FGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL------RP 190 (404)
T ss_dssp -------------GSCHHHHHHHHHHHHHH--HHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC------CT
T ss_pred -------------hhHHHHHHHHHHHHHHH--hHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC------CC
Confidence 00000000000000000 000001000000 00111233444444321 23
Q ss_pred cCCceEEeCcccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCCEEEE
Q 011490 235 RDGKVWCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDSSTRQLIELGLGLEATKKPFIWV 314 (484)
Q Consensus 235 ~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 314 (484)
+++++.++|++..+.... .++++.+|++.. +++|||++||+.. ..+.+..++++++..+.++||+
T Consensus 191 ~~~~~~~~G~~~~~~~~~------------~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~ 255 (404)
T 3h4t_A 191 TDLGTVQTGAWILPDQRP------------LSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLS 255 (404)
T ss_dssp TCCSCCBCCCCCCCCCCC------------CCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCeEEeCccccCCCCC------------CCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEE
Confidence 456888899775442211 256777888743 4589999999987 6677888999999999999999
Q ss_pred EeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhHHHHHHcCCCEeccccccchhhHH
Q 011490 315 IRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNE 394 (484)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na 394 (484)
++...... +. .++|+.+.+|+||.++|+++++ ||||||+||++|++++|||+|++|+..||+.||
T Consensus 256 ~g~~~~~~------~~-------~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na 320 (404)
T 3h4t_A 256 SGWAGLGR------ID-------EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYA 320 (404)
T ss_dssp CTTTTCCC------SS-------CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHH
T ss_pred eCCccccc------cc-------CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHH
Confidence 88653211 10 2579999999999999999888 999999999999999999999999999999999
Q ss_pred HHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHH
Q 011490 395 KLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAK 459 (484)
Q Consensus 395 ~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~ 459 (484)
.++ ++.|+|+.++.. .+++++|.++|+++++ + +|+++++++++.+.
T Consensus 321 ~~~-~~~G~g~~l~~~-------------~~~~~~l~~ai~~ll~-~----~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 321 GRV-ADLGVGVAHDGP-------------TPTVESLSAALATALT-P----GIRARAAAVAGTIR 366 (404)
T ss_dssp HHH-HHHTSEEECSSS-------------SCCHHHHHHHHHHHTS-H----HHHHHHHHHHTTCC
T ss_pred HHH-HHCCCEeccCcC-------------CCCHHHHHHHHHHHhC-H----HHHHHHHHHHHHHh
Confidence 999 599999999876 6899999999999998 7 89999988888765
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=5.9e-39 Score=323.45 Aligned_cols=373 Identities=17% Similarity=0.193 Sum_probs=243.9
Q ss_pred CCCCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCC
Q 011490 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLP 80 (484)
Q Consensus 1 m~~~~~~~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~ 80 (484)
|++++. .+||+|++.++.||++|++.||++|+++||+|++++++...+.+... +++++.++.. .+
T Consensus 1 M~~~m~-m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~---------g~~~~~~~~~-----~~ 65 (430)
T 2iyf_A 1 MTTQTT-PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT---------GPRPVLYHST-----LP 65 (430)
T ss_dssp --------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------SCEEEECCCC-----SC
T ss_pred CCCccc-cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEEcCCc-----Cc
Confidence 677665 67999999999999999999999999999999999988654443332 6788776532 11
Q ss_pred CCCCccCC-CCc-cchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCCcchHHHHHHcCCCcEEEecchHHHHHHHH
Q 011490 81 EGCESWDK-LPS-MALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCLLCLH 158 (484)
Q Consensus 81 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~ 158 (484)
........ ... ...+..+..........+.+++++ .+||+||+|....++..+|+++|||++.+++....... +.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~-~~ 142 (430)
T 2iyf_A 66 GPDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYAD--DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKG-YE 142 (430)
T ss_dssp CTTSCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTT--SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTT-HH
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhc--cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccc-cc
Confidence 11110000 001 011112222233455677788888 89999999987778899999999999998765420000 00
Q ss_pred hhhhcccCCCCCCCCcccccCCCCCccccccccCchhhh-hhhhHHH------HHHhhhcccEEEeccccccCHHHHHHH
Q 011490 159 SLSVSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILK-LKSFGEP------ILAAEMASYGVIVNSFEEMEPAYVEEY 231 (484)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~Pg~~~~~~l~~~~l~~~~~-~~~~~~~------~~~~~~~~~~~~~~s~~~l~~~~~~~~ 231 (484)
..+..... ......|+. ..+.. ...+... ........+.++.++...+++.
T Consensus 143 ~~~~~~~~------~~~~~~~~~-----------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~----- 200 (430)
T 2iyf_A 143 EEVAEPMW------REPRQTERG-----------RAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH----- 200 (430)
T ss_dssp HHTHHHHH------HHHHHSHHH-----------HHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT-----
T ss_pred cccccchh------hhhccchHH-----------HHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC-----
Confidence 00000000 000000000 00000 0001100 0011123566788887777642
Q ss_pred HhccCCc-eEEeCcccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhC-CC
Q 011490 232 KNARDGK-VWCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDSSTRQLIELGLGLEAT-KK 309 (484)
Q Consensus 232 ~~~~~~~-~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-~~ 309 (484)
...++++ +++|||.+.... +..+|.+..+++++||+++||......+.+..++++++.. +.
T Consensus 201 ~~~~~~~~v~~vG~~~~~~~-----------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~ 263 (430)
T 2iyf_A 201 ADRVDEDVYTFVGACQGDRA-----------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGW 263 (430)
T ss_dssp GGGSCTTTEEECCCCC----------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTE
T ss_pred cccCCCccEEEeCCcCCCCC-----------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCe
Confidence 2345677 999998653211 1224655455667999999999855567788899999885 88
Q ss_pred CEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhHHHHHHcCCCEeccccccc
Q 011490 310 PFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFAD 389 (484)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~D 389 (484)
+++|.++.+.....+.. .++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...|
T Consensus 264 ~~~~~~G~~~~~~~l~~-----------~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~ 330 (430)
T 2iyf_A 264 HLVLQIGRKVTPAELGE-----------LPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVD 330 (430)
T ss_dssp EEEEECC---CGGGGCS-----------CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHH
T ss_pred EEEEEeCCCCChHHhcc-----------CCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccc
Confidence 89898876532211111 2468999999999999999999 9999999999999999999999999999
Q ss_pred hhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHH
Q 011490 390 QFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTA 461 (484)
Q Consensus 390 Q~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~ 461 (484)
|..|+.++ ++.|+|+.++.. .+++++|.++|.++++|+ ++++++.++++.+.+.
T Consensus 331 q~~~a~~~-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~~ 384 (430)
T 2iyf_A 331 QFGNADML-QGLGVARKLATE-------------EATADLLRETALALVDDP----EVARRLRRIQAEMAQE 384 (430)
T ss_dssp HHHHHHHH-HHTTSEEECCCC--------------CCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHH-HHcCCEEEcCCC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHhc
Confidence 99999999 599999999766 589999999999999987 7788888887776643
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=2.7e-38 Score=319.52 Aligned_cols=363 Identities=13% Similarity=0.101 Sum_probs=229.8
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCC-Ccc
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGC-ESW 86 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~-~~~ 86 (484)
.+||+|++.++.||++|+++||++|+++||+|+|++++...+.+... +++|+.++......++.... ...
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~---------G~~~~~i~~~~~~~~~~~~~~~~~ 90 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA---------GLTAVPVGTDVDLVDFMTHAGHDI 90 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------TCCEEECSCCCCHHHHHHHTTHHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC---------CCceeecCCccchHHHhhhhhccc
Confidence 47999999999999999999999999999999999987655444433 68888876431000000000 000
Q ss_pred ------CCC----Cc---cchHHHHHHHHH---------H-chHHHHHHHHhcCCCCeEEEecCCCcchHHHHHHcCCCc
Q 011490 87 ------DKL----PS---MALLPKFFAAIE---------M-LRLPLETLFKEIQPKPSCLISDVCLPWTVSSACKFNVPR 143 (484)
Q Consensus 87 ------~~~----~~---~~~~~~~~~~~~---------~-~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~ 143 (484)
... .. ...+........ . ....+.+++++ ++||+||+|..+.++..+|+.+|||+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~aA~~lgiP~ 168 (441)
T 2yjn_A 91 IDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK--WRPDLVIWEPLTFAAPIAAAVTGTPH 168 (441)
T ss_dssp HHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHHTCCE
T ss_pred ccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh--cCCCEEEecCcchhHHHHHHHcCCCE
Confidence 000 00 011111111111 1 44556666777 89999999998788999999999999
Q ss_pred EEEecchHHHHHHHHhhhhcccCCCCCCCCcccccCCCCCccccccccCchhhhhhhhHHHHHHhhhc---------ccE
Q 011490 144 IVFHGFSCFCLLCLHSLSVSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAEMA---------SYG 214 (484)
Q Consensus 144 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pg~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~---------~~~ 214 (484)
+.+...+.........+... ....|... +. .. ..+.+....+.... ...
T Consensus 169 v~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~----~~----~~---~~~~l~~~~~~~g~~~~~~~~~~~~~ 226 (441)
T 2yjn_A 169 ARLLWGPDITTRARQNFLGL-----------LPDQPEEH----RE----DP---LAEWLTWTLEKYGGPAFDEEVVVGQW 226 (441)
T ss_dssp EEECSSCCHHHHHHHHHHHH-----------GGGSCTTT----CC----CH---HHHHHHHHHHHTTCCCCCGGGTSCSS
T ss_pred EEEecCCCcchhhhhhhhhh-----------cccccccc----cc----ch---HHHHHHHHHHHcCCCCCCccccCCCe
Confidence 99865442221111100000 00011000 00 00 11111111111100 111
Q ss_pred EEeccccccCHHHHHHHHhccCCceEEeCcccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCccC--
Q 011490 215 VIVNSFEEMEPAYVEEYKNARDGKVWCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDS-- 292 (484)
Q Consensus 215 ~~~~s~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~-- 292 (484)
.+..+...+++ +..++. ..+++.. ...+.++.+|++..+++++|||++||....
T Consensus 227 ~l~~~~~~~~~------~~~~~~--~~~~~~~----------------~~~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~ 282 (441)
T 2yjn_A 227 TIDPAPAAIRL------DTGLKT--VGMRYVD----------------YNGPSVVPEWLHDEPERRRVCLTLGISSRENS 282 (441)
T ss_dssp EEECSCGGGSC------CCCCCE--EECCCCC----------------CCSSCCCCGGGSSCCSSCEEEEEC--------
T ss_pred EEEecCccccC------CCCCCC--CceeeeC----------------CCCCcccchHhhcCCCCCEEEEECCCCccccc
Confidence 12222111110 001100 1111110 002345778998766678999999998764
Q ss_pred -CHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhH
Q 011490 293 -STRQLIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSV 371 (484)
Q Consensus 293 -~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~ 371 (484)
..+.+..++++++..++++||++++... ..+.. .++|+.+.+|+||.++|+++++ ||||||+||+
T Consensus 283 ~~~~~~~~~~~al~~~~~~~v~~~g~~~~-~~l~~-----------~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~ 348 (441)
T 2yjn_A 283 IGQVSIEELLGAVGDVDAEIIATFDAQQL-EGVAN-----------IPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSW 348 (441)
T ss_dssp --CCSTTTTHHHHHTSSSEEEECCCTTTT-SSCSS-----------CCSSEEECCSCCHHHHGGGCSE--EEECCCHHHH
T ss_pred ChHHHHHHHHHHHHcCCCEEEEEECCcch-hhhcc-----------CCCCEEEecCCCHHHHHhhCCE--EEECCCHHHH
Confidence 3356677899999889999999885432 11111 2569999999999999999998 9999999999
Q ss_pred HHHHHcCCCEeccccccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHH
Q 011490 372 LEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRA 451 (484)
Q Consensus 372 ~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a 451 (484)
+||+++|||+|++|+..||+.||.++ ++.|+|+.++.. .+++++|.++|.++++|+ .+++++
T Consensus 349 ~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~ 410 (441)
T 2yjn_A 349 HTAAIHGVPQVILPDGWDTGVRAQRT-QEFGAGIALPVP-------------ELTPDQLRESVKRVLDDP----AHRAGA 410 (441)
T ss_dssp HHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECCTT-------------TCCHHHHHHHHHHHHHCH----HHHHHH
T ss_pred HHHHHhCCCEEEeCCcccHHHHHHHH-HHcCCEEEcccc-------------cCCHHHHHHHHHHHhcCH----HHHHHH
Confidence 99999999999999999999999999 599999999876 589999999999999988 899999
Q ss_pred HHHHHHHH
Q 011490 452 REYGETAK 459 (484)
Q Consensus 452 ~~l~~~~~ 459 (484)
+++++.+.
T Consensus 411 ~~~~~~~~ 418 (441)
T 2yjn_A 411 ARMRDDML 418 (441)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988876
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=2.2e-37 Score=307.25 Aligned_cols=346 Identities=14% Similarity=0.087 Sum_probs=236.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCC-ccC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCE-SWD 87 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~-~~~ 87 (484)
|||++++.++.||++|+++||++|+++||+|++++++...+.+... +++++.++.......+..... ...
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV---------GLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC---------CCEEEEeCCcchHHHHhhhcccCcc
Confidence 5899999999999999999999999999999999987654444333 578877753210000000000 000
Q ss_pred CC-CccchHHHH-----HHHHHHchHHHHHHHHhcCCCCeEEEecCCCcchHHHHHHcCCCcEEEecchHHHHHHHHhhh
Q 011490 88 KL-PSMALLPKF-----FAAIEMLRLPLETLFKEIQPKPSCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCLLCLHSLS 161 (484)
Q Consensus 88 ~~-~~~~~~~~~-----~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~~ 161 (484)
.. ........+ ..........+.+++++ .+||+||+|....++..+|+.+|||++.+...+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~--------- 140 (384)
T 2p6p_A 72 AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA--WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD--------- 140 (384)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC---------
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc--cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc---------
Confidence 00 100111111 11122345566777777 79999999998778889999999999986532100
Q ss_pred hcccCCCCCCCCcccccCCCCCccccccccCchhhhhhhhHHHHHHhh-----hcccEEEeccccccCHHHHHHHHhccC
Q 011490 162 VSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAE-----MASYGVIVNSFEEMEPAYVEEYKNARD 236 (484)
Q Consensus 162 ~~~~~~~~~~~~~~~~~Pg~~~~~~l~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~l~~~~~~~~~~~~~ 236 (484)
..++. .. +......+.... ..+..++.++...+++. ..++
T Consensus 141 ----------------~~~~~-----------~~--~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~------~~~~ 185 (384)
T 2p6p_A 141 ----------------ADGIH-----------PG--ADAELRPELSELGLERLPAPDLFIDICPPSLRPA------NAAP 185 (384)
T ss_dssp ----------------CTTTH-----------HH--HHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT------TSCC
T ss_pred ----------------cchhh-----------HH--HHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC------CCCC
Confidence 00000 00 001111111111 01345677776666532 1111
Q ss_pred -CceEEeCcccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCccC-----CHHHHHHHHHHHHhCCCC
Q 011490 237 -GKVWCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDS-----STRQLIELGLGLEATKKP 310 (484)
Q Consensus 237 -~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~-----~~~~~~~~~~al~~~~~~ 310 (484)
.++.+++. . .+.++.+|++..+++++|||++||.... ..+.+..+++++++.+.+
T Consensus 186 ~~~~~~~~~---~----------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~ 246 (384)
T 2p6p_A 186 ARMMRHVAT---S----------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVE 246 (384)
T ss_dssp CEECCCCCC---C----------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCE
T ss_pred CCceEecCC---C----------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcE
Confidence 22333321 0 1234567887655567999999999864 447788899999999999
Q ss_pred EEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhHHHHHHcCCCEeccccccch
Q 011490 311 FIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQ 390 (484)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ 390 (484)
++|++++.. . +.+.. .++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||
T Consensus 247 ~~~~~g~~~---------~-~~l~~--~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq 311 (384)
T 2p6p_A 247 LIVAAPDTV---------A-EALRA--EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVL 311 (384)
T ss_dssp EEEECCHHH---------H-HHHHH--HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHH
T ss_pred EEEEeCCCC---------H-HhhCC--CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccc
Confidence 999887421 1 11211 2679999 99999999999988 99999999999999999999999999999
Q ss_pred hhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHH
Q 011490 391 FCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTA 461 (484)
Q Consensus 391 ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~ 461 (484)
+.||.++ ++.|+|+.++.. .+++++|.++|+++++|+ +++++++++++.+++.
T Consensus 312 ~~~a~~~-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~~ 364 (384)
T 2p6p_A 312 EAPARRV-ADYGAAIALLPG-------------EDSTEAIADSCQELQAKD----TYARRAQDLSREISGM 364 (384)
T ss_dssp HHHHHHH-HHHTSEEECCTT-------------CCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHTS
T ss_pred hHHHHHH-HHCCCeEecCcC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHhC
Confidence 9999999 599999999866 589999999999999988 8999999999988743
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=8.4e-36 Score=297.27 Aligned_cols=348 Identities=16% Similarity=0.136 Sum_probs=218.6
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCC--CCc
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEG--CES 85 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~--~~~ 85 (484)
+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.+..++.+.....+... ...
T Consensus 15 ~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 85 (398)
T 4fzr_A 15 HMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA---------GLPFAPTCPSLDMPEVLSWDREGN 85 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT---------TCCEEEEESSCCHHHHHSBCTTSC
T ss_pred ceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC---------CCeeEecCCccchHhhhhhhccCc
Confidence 68999999999999999999999999999999999987665555554 6777777632110000000 000
Q ss_pred cCCCC--ccchHH----HHHHHHHHchHHHHHHHHhcCCCCeEEEecCCCcchHHHHHHcCCCcEEEecchHHHHHHHHh
Q 011490 86 WDKLP--SMALLP----KFFAAIEMLRLPLETLFKEIQPKPSCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCLLCLHS 159 (484)
Q Consensus 86 ~~~~~--~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~ 159 (484)
..... ...... .+..........+.+++++ ++||+||+|...+++..+|+.+|||++.+............
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~- 162 (398)
T 4fzr_A 86 RTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER--WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIKS- 162 (398)
T ss_dssp BCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHHH-
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhhH-
Confidence 00000 001111 1112223445677888888 89999999987788899999999999986543211000000
Q ss_pred hhhcccCCCCCCCCcccccCCCCCccccccccCchhhhhhhhHHHHHHhh-----hcccEEEeccccccCHHHHHHHHhc
Q 011490 160 LSVSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAE-----MASYGVIVNSFEEMEPAYVEEYKNA 234 (484)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~Pg~~~~~~l~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~l~~~~~~~~~~~ 234 (484)
. ....+....... ......+......+.. ....
T Consensus 163 ----------------------------------~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 200 (398)
T 4fzr_A 163 ----------------------------------A---GVGELAPELAELGLTDFPDPLLSIDVCPPSMEA-----QPKP 200 (398)
T ss_dssp ----------------------------------H---HHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC---------C
T ss_pred ----------------------------------H---HHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCC-----CCCC
Confidence 0 000011111100 0111222222222221 1000
Q ss_pred cCCceEEeCcccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCccC--------CHHHHHHHHHHHHh
Q 011490 235 RDGKVWCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDS--------STRQLIELGLGLEA 306 (484)
Q Consensus 235 ~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~--------~~~~~~~~~~al~~ 306 (484)
....+.++++.. ...++.+|+...+++++|||++||.... ..+.+..+++++++
T Consensus 201 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~ 262 (398)
T 4fzr_A 201 GTTKMRYVPYNG------------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPK 262 (398)
T ss_dssp CCEECCCCCCCC------------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGG
T ss_pred CCCCeeeeCCCC------------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHh
Confidence 000111111100 1234556776555667999999998753 23557889999998
Q ss_pred CCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhHHHHHHcCCCEecccc
Q 011490 307 TKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPF 386 (484)
Q Consensus 307 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~ 386 (484)
.+.+++|+.++.. ...+.. .++|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|.
T Consensus 263 ~~~~~v~~~~~~~-~~~l~~-----------~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~ 328 (398)
T 4fzr_A 263 LGFEVVVAVSDKL-AQTLQP-----------LPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPV 328 (398)
T ss_dssp GTCEEEECCCC--------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCC
T ss_pred CCCEEEEEeCCcc-hhhhcc-----------CCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCC
Confidence 8999999887653 111111 3679999999999999999999 9999999999999999999999999
Q ss_pred ccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHH
Q 011490 387 FADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAK 459 (484)
Q Consensus 387 ~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~ 459 (484)
..||+.|+.++ ++.|+|+.++.. .+++++|.++|.++++|+ .+++++++.++.+.
T Consensus 329 ~~~q~~~a~~~-~~~g~g~~~~~~-------------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~ 383 (398)
T 4fzr_A 329 IAEVWDSARLL-HAAGAGVEVPWE-------------QAGVESVLAACARIRDDS----SYVGNARRLAAEMA 383 (398)
T ss_dssp SGGGHHHHHHH-HHTTSEEECC--------------------CHHHHHHHHHHCT----HHHHHHHHHHHHHT
T ss_pred chhHHHHHHHH-HHcCCEEecCcc-------------cCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHH
Confidence 99999999999 599999999877 589999999999999999 88888888888766
No 17
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=5.3e-34 Score=283.57 Aligned_cols=347 Identities=14% Similarity=0.156 Sum_probs=225.7
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEe-eCCCccC-C----CCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEF-YFPCQEV-G----LPE 81 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i-~~~~~~~-~----~~~ 81 (484)
+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.+..+ +.+.... . .+.
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA---------GLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB---------TCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC---------CCceeeecCCccchhhhhhhcccc
Confidence 47999999999999999999999999999999999986544444433 6777776 3211000 0 000
Q ss_pred CCCccCCCCccchHHHHHHHHHHc-------hHHHHHHHHhcCCCCeEEEecCCCcchHHHHHHcCCCcEEEecchHHHH
Q 011490 82 GCESWDKLPSMALLPKFFAAIEML-------RLPLETLFKEIQPKPSCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCL 154 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~ 154 (484)
................+......+ ...+.+++++ ++||+||+|...+++..+|+.+|||++.+.......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~- 148 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA--WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT- 148 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT-
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh--cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc-
Confidence 000000000001111111222233 6677888888 899999999877788899999999999864322100
Q ss_pred HHHHhhhhcccCCCCCCCCcccccCCCCCccccccccCchhhhhhhhHHHHHHhhhc-----ccEEEeccccccCHHHHH
Q 011490 155 LCLHSLSVSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAEMA-----SYGVIVNSFEEMEPAYVE 229 (484)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~Pg~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~l~~~~~~ 229 (484)
.. ..... ....+......... ....+..+..+++.
T Consensus 149 ---------------------------~~-------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 188 (391)
T 3tsa_A 149 ---------------------------AG-------PFSDR--AHELLDPVCRHHGLTGLPTPELILDPCPPSLQA---- 188 (391)
T ss_dssp ---------------------------TT-------HHHHH--HHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSC----
T ss_pred ---------------------------cc-------cccch--HHHHHHHHHHHcCCCCCCCCceEEEecChhhcC----
Confidence 00 00000 11111111111100 12222222222220
Q ss_pred HHHhccCCceEEeCcccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCcc---CCHHHHHHHHHHHHh
Q 011490 230 EYKNARDGKVWCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCD---SSTRQLIELGLGLEA 306 (484)
Q Consensus 230 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~---~~~~~~~~~~~al~~ 306 (484)
........+.|+ |. ..+....+|+...+++++|++++||... ...+.+..++++ ++
T Consensus 189 -~~~~~~~~~~~~-p~------------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~ 247 (391)
T 3tsa_A 189 -SDAPQGAPVQYV-PY------------------NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TE 247 (391)
T ss_dssp -TTSCCCEECCCC-CC------------------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HT
T ss_pred -CCCCccCCeeee-cC------------------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-cc
Confidence 000000111122 10 0123445677666667899999999854 226677888888 87
Q ss_pred C-CCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhHHHHHHcCCCEeccc
Q 011490 307 T-KKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWP 385 (484)
Q Consensus 307 ~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P 385 (484)
. +.+++|..++.. ... +. ..++|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|
T Consensus 248 ~p~~~~v~~~~~~~-~~~-----l~------~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p 313 (391)
T 3tsa_A 248 LPGVEAVIAVPPEH-RAL-----LT------DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLP 313 (391)
T ss_dssp STTEEEEEECCGGG-GGG-----CT------TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECC
T ss_pred CCCeEEEEEECCcc-hhh-----cc------cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecC
Confidence 7 788998887642 111 11 12569999999999999999998 999999999999999999999999
Q ss_pred cccchhhHHHHHHHHhcceeEecc--CCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHH
Q 011490 386 FFADQFCNEKLVVQVLRIGVTIGA--ERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAK 459 (484)
Q Consensus 386 ~~~DQ~~na~~~~e~~G~g~~l~~--~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~ 459 (484)
...||+.|+.++ ++.|+|+.++. . ..+++.|.++|.++++|+ .++++++++++.+.
T Consensus 314 ~~~~q~~~a~~~-~~~g~g~~~~~~~~-------------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~ 371 (391)
T 3tsa_A 314 QYFDQFDYARNL-AAAGAGICLPDEQA-------------QSDHEQFTDSIATVLGDT----GFAAAAIKLSDEIT 371 (391)
T ss_dssp CSTTHHHHHHHH-HHTTSEEECCSHHH-------------HTCHHHHHHHHHHHHTCT----HHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHH-HHcCCEEecCcccc-------------cCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH
Confidence 999999999999 59999999987 5 589999999999999999 88888888887765
No 18
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=3.2e-34 Score=285.86 Aligned_cols=342 Identities=17% Similarity=0.176 Sum_probs=227.7
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCC----C
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEG----C 83 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~----~ 83 (484)
.|||+|++.++.||++|++.||++|+++||+|+++++ ...+.+... ++.+..++.+......... .
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA---------GLEVVDVAPDYSAVKVFEQVAKDN 89 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT---------TCEEEESSTTCCHHHHHHHHHHHC
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC---------CCeeEecCCccCHHHHhhhcccCC
Confidence 5899999999999999999999999999999999998 655555443 6888887632100000000 0
Q ss_pred Cc------cCCCCccchH-HHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCCcchHHHHHHcCCCcEEEecchHHHHHH
Q 011490 84 ES------WDKLPSMALL-PKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCLLC 156 (484)
Q Consensus 84 ~~------~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~ 156 (484)
.. .........+ ..+..........+.+++++ ++||+||+|...+++..+|+.+|||++.+.......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~--- 164 (398)
T 3oti_A 90 PRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDD--YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRT--- 164 (398)
T ss_dssp HHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCC---
T ss_pred ccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCc---
Confidence 00 0000111222 22233334566788888998 899999999888888999999999999854321000
Q ss_pred HHhhhhcccCCCCCCCCcccccCCCCCccccccccCchhhhhhhhHHHHHHhhh----cccEEEeccccccCHHHHHHHH
Q 011490 157 LHSLSVSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAEM----ASYGVIVNSFEEMEPAYVEEYK 232 (484)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~Pg~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~l~~~~~~~~~ 232 (484)
.... .. ....+........ .....+......+. ...
T Consensus 165 ----------------------~~~~-----------~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 204 (398)
T 3oti_A 165 ----------------------RGMH-----------RS--IASFLTDLMDKHQVSLPEPVATIESFPPSLL-----LEA 204 (398)
T ss_dssp ----------------------TTHH-----------HH--HHTTCHHHHHHTTCCCCCCSEEECSSCGGGG-----TTS
T ss_pred ----------------------cchh-----------hH--HHHHHHHHHHHcCCCCCCCCeEEEeCCHHHC-----CCC
Confidence 0000 00 0000111111110 01111211111111 000
Q ss_pred hccCCceEEeCcccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCccC--CHHHHHHHHHHHHhCCCC
Q 011490 233 NARDGKVWCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDS--STRQLIELGLGLEATKKP 310 (484)
Q Consensus 233 ~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~--~~~~~~~~~~al~~~~~~ 310 (484)
......+.++ | ...+....+|+...+++++|||++||.... ..+.+..+++++++.+.+
T Consensus 205 ~~~~~~~~~~-~------------------~~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~ 265 (398)
T 3oti_A 205 EPEGWFMRWV-P------------------YGGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDAD 265 (398)
T ss_dssp CCCSBCCCCC-C------------------CCCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSE
T ss_pred CCCCCCcccc-C------------------CCCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCE
Confidence 0000001111 0 011344557777666677999999999653 456788899999999999
Q ss_pred EEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhHHHHHHcCCCEeccccccch
Q 011490 311 FIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQ 390 (484)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ 390 (484)
++|+.++... ..+.. .++|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||
T Consensus 266 ~v~~~g~~~~-~~l~~-----------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq 331 (398)
T 3oti_A 266 FVLALGDLDI-SPLGT-----------LPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQ 331 (398)
T ss_dssp EEEECTTSCC-GGGCS-----------CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCC
T ss_pred EEEEECCcCh-hhhcc-----------CCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchh
Confidence 9999877531 11111 2569999999999999999999 99999999999999999999999999999
Q ss_pred hhHH--HHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHH
Q 011490 391 FCNE--KLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAK 459 (484)
Q Consensus 391 ~~na--~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~ 459 (484)
+.|+ .++ ++.|+|+.++.. ..+++.|. ++++|+ .++++++++++++.
T Consensus 332 ~~~a~~~~~-~~~g~g~~~~~~-------------~~~~~~l~----~ll~~~----~~~~~~~~~~~~~~ 380 (398)
T 3oti_A 332 FQHTAREAV-SRRGIGLVSTSD-------------KVDADLLR----RLIGDE----SLRTAAREVREEMV 380 (398)
T ss_dssp SSCTTHHHH-HHHTSEEECCGG-------------GCCHHHHH----HHHHCH----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHCCCEEeeCCC-------------CCCHHHHH----HHHcCH----HHHHHHHHHHHHHH
Confidence 9999 999 599999999876 57888887 788888 88999988888876
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=1.8e-31 Score=267.18 Aligned_cols=350 Identities=17% Similarity=0.222 Sum_probs=231.1
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCC--------
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGL-------- 79 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~-------- 79 (484)
+|||+|++.++.||++|++.||++|+++||+|++++++...+.+... ++++..++..... ++
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~-~~~~~~~~~~ 89 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL---------GFEPVATGMPVFD-GFLAALRIRF 89 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCCHHH-HHHHHHHHHH
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc---------CCceeecCccccc-chhhhhhhhh
Confidence 79999999999999999999999999999999999987554433333 6888877620000 00
Q ss_pred CC-CCCccCCCCccchHHHHHH-H-HHHchHHHHHHHHhcCCCCeEEEecCCCcchHHHHHHcCCCcEEEecchHHHHHH
Q 011490 80 PE-GCESWDKLPSMALLPKFFA-A-IEMLRLPLETLFKEIQPKPSCLISDVCLPWTVSSACKFNVPRIVFHGFSCFCLLC 156 (484)
Q Consensus 80 ~~-~~~~~~~~~~~~~~~~~~~-~-~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~v~~~~~~~~~~~~ 156 (484)
.. .............+..... . .......+.+++++ ++||+||+|....++..+|+.+|||+|.........
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~--- 164 (412)
T 3otg_A 90 DTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER--LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP--- 164 (412)
T ss_dssp SCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC---
T ss_pred cccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh--cCCCEEEECchhhHHHHHHHHcCCCEEEecccccCc---
Confidence 00 0000000000011111211 1 22345677888888 899999999877778899999999999853321100
Q ss_pred HHhhhhcccCCCCCCCCcccccCCCCCccccccccCchhhhhhhhHHHHHHh----------hhcccEEEeccccccCHH
Q 011490 157 LHSLSVSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAA----------EMASYGVIVNSFEEMEPA 226 (484)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~Pg~~~~~~l~~~~l~~~~~~~~~~~~~~~~----------~~~~~~~~~~s~~~l~~~ 226 (484)
++.. .. +...+...... ...++..+..+-..++.
T Consensus 165 ----------------------~~~~----------~~---~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~- 208 (412)
T 3otg_A 165 ----------------------DDLT----------RS---IEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQE- 208 (412)
T ss_dssp ----------------------SHHH----------HH---HHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSC-
T ss_pred ----------------------hhhh----------HH---HHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcC-
Confidence 0000 00 00011111110 01223334333333331
Q ss_pred HHHHHHhccCCceEEeCcccCCCcccchhhccCCCCCCCCcccccc-cCCCCCCcEEEEecCCCccCCHHHHHHHHHHHH
Q 011490 227 YVEEYKNARDGKVWCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKW-LDSWQPGSAVYVCLGSLCDSSTRQLIELGLGLE 305 (484)
Q Consensus 227 ~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~ 305 (484)
....+......+.+.... ......+| ....+++++|++++||......+.+..++++++
T Consensus 209 ----~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~ 268 (412)
T 3otg_A 209 ----PEFRARPRRHELRPVPFA----------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLA 268 (412)
T ss_dssp ----HHHHTCTTEEECCCCCCC----------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHH
T ss_pred ----CcccCCCCcceeeccCCC----------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHH
Confidence 111111111111111000 02234456 333345669999999997556788888999999
Q ss_pred hCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhHHHHHHcCCCEeccc
Q 011490 306 ATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWP 385 (484)
Q Consensus 306 ~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P 385 (484)
+.+.+++|..++......+.. .++|+.+.+|+|+..+|+++++ ||+|||+||++||+++|+|+|++|
T Consensus 269 ~~~~~~~~~~g~~~~~~~l~~-----------~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p 335 (412)
T 3otg_A 269 GLDADVLVASGPSLDVSGLGE-----------VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFP 335 (412)
T ss_dssp TSSSEEEEECCSSCCCTTCCC-----------CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECC
T ss_pred cCCCEEEEEECCCCChhhhcc-----------CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecC
Confidence 889999999887652322222 2569999999999999999999 999999999999999999999999
Q ss_pred cccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHH
Q 011490 386 FFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAK 459 (484)
Q Consensus 386 ~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~ 459 (484)
...||..|+..+ ++.|+|..++.. ..++++|.++|.++++|+ ++++++.+.++++.
T Consensus 336 ~~~~q~~~~~~v-~~~g~g~~~~~~-------------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~ 391 (412)
T 3otg_A 336 WAGDSFANAQAV-AQAGAGDHLLPD-------------NISPDSVSGAAKRLLAEE----SYRAGARAVAAEIA 391 (412)
T ss_dssp CSTTHHHHHHHH-HHHTSEEECCGG-------------GCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHH-HHcCCEEecCcc-------------cCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHh
Confidence 999999999999 599999999877 589999999999999988 77777777766655
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=100.00 E-value=7.6e-32 Score=264.66 Aligned_cols=340 Identities=14% Similarity=0.120 Sum_probs=213.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchh--hhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCCcc
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAA--RFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESW 86 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~--~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~ 86 (484)
.||+|...|+-||++|.++||++|+++||+|+|++++...+ .+.+. +++++.++.. ++.. .
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~---------g~~~~~i~~~----~~~~----~ 65 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA---------GLPLHLIQVS----GLRG----K 65 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG---------TCCEEECC---------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc---------CCcEEEEECC----CcCC----C
Confidence 48999998889999999999999999999999998764322 22222 5777776531 1211 0
Q ss_pred CCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCCc--chHHHHHHcCCCcEEEecchHHHHHHHHhhhhcc
Q 011490 87 DKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCLP--WTVSSACKFNVPRIVFHGFSCFCLLCLHSLSVSK 164 (484)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~--~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~ 164 (484)
...........+... ......++++ .+||+||++..+. .+..+|+.+|||++.
T Consensus 66 ~~~~~~~~~~~~~~~----~~~~~~~l~~--~~PDvVi~~g~~~s~p~~laA~~~~iP~vi------------------- 120 (365)
T 3s2u_A 66 GLKSLVKAPLELLKS----LFQALRVIRQ--LRPVCVLGLGGYVTGPGGLAARLNGVPLVI------------------- 120 (365)
T ss_dssp -------CHHHHHHH----HHHHHHHHHH--HCCSEEEECSSSTHHHHHHHHHHTTCCEEE-------------------
T ss_pred CHHHHHHHHHHHHHH----HHHHHHHHHh--cCCCEEEEcCCcchHHHHHHHHHcCCCEEE-------------------
Confidence 111111112222222 2234567777 7999999998554 456789999999997
Q ss_pred cCCCCCCCCcccccCCCCCccccccccCchhhhhhhhHHHHHHhhh-cccEEEeccccccCHHHHHHHHhccCCceEEeC
Q 011490 165 AHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAEM-ASYGVIVNSFEEMEPAYVEEYKNARDGKVWCVG 243 (484)
Q Consensus 165 ~~~~~~~~~~~~~~Pg~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~l~~~~~~~~~~~~~~~~~~vG 243 (484)
.++..+||+.. +.+. .+.. +..++++..+ ...+..++|
T Consensus 121 --------he~n~~~G~~n-----------------------r~l~~~a~~-v~~~~~~~~~---------~~~k~~~~g 159 (365)
T 3s2u_A 121 --------HEQNAVAGTAN-----------------------RSLAPIARR-VCEAFPDTFP---------ASDKRLTTG 159 (365)
T ss_dssp --------EECSSSCCHHH-----------------------HHHGGGCSE-EEESSTTSSC---------C---CEECC
T ss_pred --------EecchhhhhHH-----------------------Hhhccccce-eeeccccccc---------CcCcEEEEC
Confidence 23344455431 1111 2222 3333332211 124566777
Q ss_pred cccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhC----CCCEEEEEeCCC
Q 011490 244 PVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDSSTRQLIELGLGLEAT----KKPFIWVIRPGD 319 (484)
Q Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~ 319 (484)
+........ .. ..+....+++++|+|..||.+... ....+.++++.. +..++|.+|.+.
T Consensus 160 ~pvr~~~~~-------------~~--~~~~~~~~~~~~ilv~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi~~~G~~~ 222 (365)
T 3s2u_A 160 NPVRGELFL-------------DA--HARAPLTGRRVNLLVLGGSLGAEP--LNKLLPEALAQVPLEIRPAIRHQAGRQH 222 (365)
T ss_dssp CCCCGGGCC-------------CT--TSSCCCTTSCCEEEECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEEEECCTTT
T ss_pred CCCchhhcc-------------ch--hhhcccCCCCcEEEEECCcCCccc--cchhhHHHHHhcccccceEEEEecCccc
Confidence 543321110 00 111122234568999999987643 223355566543 456777776553
Q ss_pred CCCCchhhhhhhHHHHHhcCCCeEeeCcCCh-hhhcCCCCccccccccchhhHHHHHHcCCCEeccccc----cchhhHH
Q 011490 320 QAKGLEDWLLAEKFEERIEGRGLLIRGWAPQ-VVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFF----ADQFCNE 394 (484)
Q Consensus 320 ~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq-~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~----~DQ~~na 394 (484)
. .. +.+.+ ...+.++.+.+|+++ .++|..+++ +|||+|.+|++|++++|+|+|.+|+. .+|..||
T Consensus 223 ~----~~--~~~~~--~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA 292 (365)
T 3s2u_A 223 A----EI--TAERY--RTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNA 292 (365)
T ss_dssp H----HH--HHHHH--HHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHH
T ss_pred c----cc--cccee--cccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHH
Confidence 1 11 11111 123568889999997 469999999 99999999999999999999999974 5899999
Q ss_pred HHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHH
Q 011490 395 KLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKL 474 (484)
Q Consensus 395 ~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~ 474 (484)
+.+ ++.|+|+.++.+ .++++.|.++|.++++|++..++|++++++++.. ++.++
T Consensus 293 ~~l-~~~G~a~~l~~~-------------~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~~~------------~aa~~ 346 (365)
T 3s2u_A 293 EFL-VRSGAGRLLPQK-------------STGAAELAAQLSEVLMHPETLRSMADQARSLAKP------------EATRT 346 (365)
T ss_dssp HHH-HTTTSEEECCTT-------------TCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTCCT------------THHHH
T ss_pred HHH-HHCCCEEEeecC-------------CCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcCCc------------cHHHH
Confidence 999 599999999877 6999999999999999996666666665554321 34566
Q ss_pred HHHHHHhhcC
Q 011490 475 LIKDILQQAK 484 (484)
Q Consensus 475 ~~~~~~~~~~ 484 (484)
+++.|++++|
T Consensus 347 ia~~i~~lar 356 (365)
T 3s2u_A 347 VVDACLEVAR 356 (365)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHHc
Confidence 6666666553
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.2e-26 Score=202.55 Aligned_cols=161 Identities=22% Similarity=0.368 Sum_probs=137.0
Q ss_pred CcccccccCCCCCCcEEEEecCCCcc-CCHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEe
Q 011490 266 GSGCLKWLDSWQPGSAVYVCLGSLCD-SSTRQLIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLI 344 (484)
Q Consensus 266 ~~~~~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~ 344 (484)
++++.+|++..+++++|||++||... ...+.+..+++++++.+++++|+.++.... . + ++|+.+
T Consensus 8 ~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~----~--~---------~~~v~~ 72 (170)
T 2o6l_A 8 PKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPD----T--L---------GLNTRL 72 (170)
T ss_dssp CHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCT----T--C---------CTTEEE
T ss_pred CHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcc----c--C---------CCcEEE
Confidence 67888999877666799999999864 467788889999998899999998765311 1 2 458999
Q ss_pred eCcCChhhhcCCCCccccccccchhhHHHHHHcCCCEeccccccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCc
Q 011490 345 RGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVP 424 (484)
Q Consensus 345 ~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~ 424 (484)
.+|+||.+++.|+.+++||||||+||++||+++|+|+|++|...||..||.++ ++.|+|+.++.. .
T Consensus 73 ~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~~~~-------------~ 138 (170)
T 2o6l_A 73 YKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRVDFN-------------T 138 (170)
T ss_dssp ESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEECCTT-------------T
T ss_pred ecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEeccc-------------c
Confidence 99999999996666666999999999999999999999999999999999999 599999999876 6
Q ss_pred cCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHH
Q 011490 425 VKKEDVKKAINMLMDEGEERDERRRRAREYGETAK 459 (484)
Q Consensus 425 ~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~ 459 (484)
++.++|.++|.++++|+ .|+++++++++.++
T Consensus 139 ~~~~~l~~~i~~ll~~~----~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 139 MSSTDLLNALKRVINDP----SYKENVMKLSRIQH 169 (170)
T ss_dssp CCHHHHHHHHHHHHHCH----HHHHHHHHHC----
T ss_pred CCHHHHHHHHHHHHcCH----HHHHHHHHHHHHhh
Confidence 89999999999999987 89999999998876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.87 E-value=9e-21 Score=186.04 Aligned_cols=343 Identities=13% Similarity=0.066 Sum_probs=205.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCCccCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESWDK 88 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (484)
+||++++.+..||..+++.|+++|+++||+|++++...... ..... ..++++..++.+. +...
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~--~~~~~-----~~g~~~~~~~~~~----~~~~------ 69 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRME--ADLVP-----KHGIEIDFIRISG----LRGK------ 69 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTH--HHHGG-----GGTCEEEECCCCC----CTTC------
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcch--hhhcc-----ccCCceEEecCCc----cCcC------
Confidence 79999998878999999999999999999999998764321 11111 1157776655321 1110
Q ss_pred CCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC--cchHHHHHHcCCCcEEEecchHHHHHHHHhhhhcccC
Q 011490 89 LPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCL--PWTVSSACKFNVPRIVFHGFSCFCLLCLHSLSVSKAH 166 (484)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~--~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~ 166 (484)
.....+..... .......+.+++++ .+||+|+++... ..+..+++.+|+|++......
T Consensus 70 -~~~~~~~~~~~-~~~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~---------------- 129 (364)
T 1f0k_A 70 -GIKALIAAPLR-IFNAWRQARAIMKA--YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG---------------- 129 (364)
T ss_dssp -CHHHHHTCHHH-HHHHHHHHHHHHHH--HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS----------------
T ss_pred -ccHHHHHHHHH-HHHHHHHHHHHHHh--cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC----------------
Confidence 00000100111 11223456677777 799999998743 345677888999998632110
Q ss_pred CCCCCCCcccccCCCCCccccccccCchhhhhhhhHHHHHHhhhcccEEEeccccccCHHHHHHHHhccCCceEEeCccc
Q 011490 167 ESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAEMASYGVIVNSFEEMEPAYVEEYKNARDGKVWCVGPVS 246 (484)
Q Consensus 167 ~~~~~~~~~~~~Pg~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~~~~~vGp~~ 246 (484)
.|+. ... ...+.++.++..+-. . + +++..+|+.+
T Consensus 130 -----------~~~~--------------------~~~--~~~~~~d~v~~~~~~-~-----------~-~~~~~i~n~v 163 (364)
T 1f0k_A 130 -----------IAGL--------------------TNK--WLAKIATKVMQAFPG-A-----------F-PNAEVVGNPV 163 (364)
T ss_dssp -----------SCCH--------------------HHH--HHTTTCSEEEESSTT-S-----------S-SSCEECCCCC
T ss_pred -----------CCcH--------------------HHH--HHHHhCCEEEecChh-h-----------c-CCceEeCCcc
Confidence 0110 000 011234444443321 1 2 2455666432
Q ss_pred CCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhC--CCCEEEEEeCCCCCCCc
Q 011490 247 LCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDSSTRQLIELGLGLEAT--KKPFIWVIRPGDQAKGL 324 (484)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~ 324 (484)
.... . . .....+.+...+++++|++..|+... .+....++++++.. +.++++.+|.+..
T Consensus 164 ~~~~--~-----~------~~~~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~~---- 224 (364)
T 1f0k_A 164 RTDV--L-----A------LPLPQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGSQ---- 224 (364)
T ss_dssp CHHH--H-----T------SCCHHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTCH----
T ss_pred chhh--c-----c------cchhhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCchH----
Confidence 2110 0 0 00011122222334578888888753 34444555666544 4666777776541
Q ss_pred hhhhhhhHHHHHhcCCCeEeeCcCCh-hhhcCCCCccccccccchhhHHHHHHcCCCEeccccc---cchhhHHHHHHHH
Q 011490 325 EDWLLAEKFEERIEGRGLLIRGWAPQ-VVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFF---ADQFCNEKLVVQV 400 (484)
Q Consensus 325 ~~~~l~~~~~~~~~~~nv~~~~~~pq-~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~~~e~ 400 (484)
.. +.+.. .+...+|+.+.+|+++ ..++..+++ +|+++|.++++||+++|+|+|+.|.. .||..|+..+ .+
T Consensus 225 ~~--l~~~~-~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~-~~ 298 (364)
T 1f0k_A 225 QS--VEQAY-AEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPL-EK 298 (364)
T ss_dssp HH--HHHHH-HHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHH-HH
T ss_pred HH--HHHHH-hhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHH-Hh
Confidence 11 22111 1222358999999954 779999999 99999999999999999999999987 7999999999 59
Q ss_pred hcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHH
Q 011490 401 LRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDIL 480 (484)
Q Consensus 401 ~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 480 (484)
.|.|..++.. +.+.++|.++|.++ |++..+.+.++++++. +..+....++++.+.+.
T Consensus 299 ~g~g~~~~~~-------------d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~y~ 355 (364)
T 1f0k_A 299 AGAAKIIEQP-------------QLSVDAVANTLAGW--SRETLLTMAERARAAS--------IPDATERVANEVSRVAR 355 (364)
T ss_dssp TTSEEECCGG-------------GCCHHHHHHHHHTC--CHHHHHHHHHHHHHTC--------CTTHHHHHHHHHHHHHT
T ss_pred CCcEEEeccc-------------cCCHHHHHHHHHhc--CHHHHHHHHHHHHHhh--------ccCHHHHHHHHHHHHHH
Confidence 9999988776 57899999999988 6744444444443332 23444444555555444
Q ss_pred hh
Q 011490 481 QQ 482 (484)
Q Consensus 481 ~~ 482 (484)
++
T Consensus 356 ~~ 357 (364)
T 1f0k_A 356 AL 357 (364)
T ss_dssp TC
T ss_pred HH
Confidence 43
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.61 E-value=6.7e-15 Score=137.14 Aligned_cols=118 Identities=9% Similarity=0.046 Sum_probs=90.5
Q ss_pred CCcEEEEecCCCccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHh-cCCCeEeeCcCChh-hhcC
Q 011490 278 PGSAVYVCLGSLCDSSTRQLIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERI-EGRGLLIRGWAPQV-VILS 355 (484)
Q Consensus 278 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~-~~~nv~~~~~~pq~-~ll~ 355 (484)
+.+.|+|++|..... .....+++++.... ++.++.+.+.. ..+.+.... ..+|+.+..|+++. +++.
T Consensus 156 ~~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~~--------~~~~l~~~~~~~~~v~v~~~~~~m~~~m~ 224 (282)
T 3hbm_A 156 KKYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSNP--------NLKKLQKFAKLHNNIRLFIDHENIAKLMN 224 (282)
T ss_dssp CCEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTCT--------THHHHHHHHHTCSSEEEEESCSCHHHHHH
T ss_pred cCCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCch--------HHHHHHHHHhhCCCEEEEeCHHHHHHHHH
Confidence 345799999875432 35556778876544 67777776642 222332222 24589999999875 5999
Q ss_pred CCCccccccccchhhHHHHHHcCCCEeccccccchhhHHHHHHHHhcceeEeccC
Q 011490 356 HPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAE 410 (484)
Q Consensus 356 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~ 410 (484)
.+++ +|++|| +|++|+++.|+|+|++|...+|..||..+ ++.|+++.+..-
T Consensus 225 ~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l-~~~G~~~~~~~~ 275 (282)
T 3hbm_A 225 ESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWL-AKKGYEVEYKYL 275 (282)
T ss_dssp TEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH-HHTTCEEECGGG
T ss_pred HCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH-HHCCCEEEcchh
Confidence 9999 999999 89999999999999999999999999999 599999988654
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.59 E-value=2.1e-15 Score=134.71 Aligned_cols=120 Identities=12% Similarity=0.073 Sum_probs=88.6
Q ss_pred CCCcEEEEecCCCccCCHHHHHHH-----HHHHHhCC-CCEEEEEeCCCCCCCchhhhhhhHHHHHh-------------
Q 011490 277 QPGSAVYVCLGSLCDSSTRQLIEL-----GLGLEATK-KPFIWVIRPGDQAKGLEDWLLAEKFEERI------------- 337 (484)
Q Consensus 277 ~~~~~V~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~~~~~------------- 337 (484)
+++++|||+.||... -.+.+..+ ++++...+ .++++++|...... .+.+....
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~-------~~~~~~~~~~~~~~~l~p~~~ 97 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSE-------FEHLVQERGGQRESQKIPIDQ 97 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCC-------CCSHHHHHTCEECSCCCSSCT
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhh-------HHHHHHhhhcccccccccccc
Confidence 446689999999742 23433333 48888777 79999998764310 00000111
Q ss_pred --------------cCCCeEeeCcCChh-hhcC-CCCccccccccchhhHHHHHHcCCCEeccccc----cchhhHHHHH
Q 011490 338 --------------EGRGLLIRGWAPQV-VILS-HPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFF----ADQFCNEKLV 397 (484)
Q Consensus 338 --------------~~~nv~~~~~~pq~-~ll~-~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~~ 397 (484)
..-++.+.+|+++. ++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l 175 (224)
T 2jzc_A 98 FGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF 175 (224)
T ss_dssp TCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH
T ss_pred ccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH
Confidence 01256678898875 7999 9999 99999999999999999999999984 3699999999
Q ss_pred HHHhcceeEe
Q 011490 398 VQVLRIGVTI 407 (484)
Q Consensus 398 ~e~~G~g~~l 407 (484)
++.|+++.+
T Consensus 176 -~~~G~~~~~ 184 (224)
T 2jzc_A 176 -VELGYVWSC 184 (224)
T ss_dssp -HHHSCCCEE
T ss_pred -HHCCCEEEc
Confidence 599998765
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.41 E-value=6.7e-11 Score=116.58 Aligned_cols=345 Identities=12% Similarity=0.035 Sum_probs=189.6
Q ss_pred CcEEEEEcC--C--CCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCC
Q 011490 8 QLHFILFPF--L--AQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGC 83 (484)
Q Consensus 8 ~~kil~~~~--~--~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~ 83 (484)
++||++++. + ..|.-.-+..|++.| +||+|++++............ ...++.+..++.. ..
T Consensus 4 ~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-------~~- 68 (394)
T 3okp_A 4 SRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD-----KTLDYEVIRWPRS-------VM- 68 (394)
T ss_dssp CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH-----TTCSSEEEEESSS-------SC-
T ss_pred CceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc-----cccceEEEEcccc-------cc-
Confidence 678999985 3 457778899999999 799999998765543212211 1235777766521 00
Q ss_pred CccCCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC--cchHHHHHHcCCCcEEEecchHHHHHHHHhhh
Q 011490 84 ESWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCL--PWTVSSACKFNVPRIVFHGFSCFCLLCLHSLS 161 (484)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~--~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~~ 161 (484)
. ... .....+.+++++ .+||+|++.... .....+++.+|+|.+++.........
T Consensus 69 -----~---~~~--------~~~~~l~~~~~~--~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------ 124 (394)
T 3okp_A 69 -----L---PTP--------TTAHAMAEIIRE--REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW------ 124 (394)
T ss_dssp -----C---SCH--------HHHHHHHHHHHH--TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH------
T ss_pred -----c---cch--------hhHHHHHHHHHh--cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh------
Confidence 0 111 223456777888 899999987643 34556788899995543222211100
Q ss_pred hcccCCCCCCCCcccccCCCCCccccccccCchhhhhhhhHHHHHHhhhcccEEEeccccccCHHHHHHHHhcc--CCce
Q 011490 162 VSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAEMASYGVIVNSFEEMEPAYVEEYKNAR--DGKV 239 (484)
Q Consensus 162 ~~~~~~~~~~~~~~~~~Pg~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~--~~~~ 239 (484)
.. ............+.++.++..|-... +.+.... ..++
T Consensus 125 --------------------~~--------------~~~~~~~~~~~~~~~d~ii~~s~~~~-----~~~~~~~~~~~~~ 165 (394)
T 3okp_A 125 --------------------SM--------------LPGSRQSLRKIGTEVDVLTYISQYTL-----RRFKSAFGSHPTF 165 (394)
T ss_dssp --------------------TT--------------SHHHHHHHHHHHHHCSEEEESCHHHH-----HHHHHHHCSSSEE
T ss_pred --------------------hh--------------cchhhHHHHHHHHhCCEEEEcCHHHH-----HHHHHhcCCCCCe
Confidence 00 00001111223456667676664321 1222222 2456
Q ss_pred EEeCcccCCCcccc-hhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhC-----CCCEEE
Q 011490 240 WCVGPVSLCNKEDI-DKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDSSTRQLIELGLGLEAT-----KKPFIW 313 (484)
Q Consensus 240 ~~vGp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~ 313 (484)
..+.+-+....-.. .. .....+.+.+.-.+ +..+++..|+... .+.+..++++++.+ +.++++
T Consensus 166 ~vi~ngv~~~~~~~~~~--------~~~~~~~~~~~~~~-~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~~l~i 234 (394)
T 3okp_A 166 EHLPSGVDVKRFTPATP--------EDKSATRKKLGFTD-TTPVIACNSRLVP--RKGQDSLIKAMPQVIAARPDAQLLI 234 (394)
T ss_dssp EECCCCBCTTTSCCCCH--------HHHHHHHHHTTCCT-TCCEEEEESCSCG--GGCHHHHHHHHHHHHHHSTTCEEEE
T ss_pred EEecCCcCHHHcCCCCc--------hhhHHHHHhcCCCc-CceEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEEEE
Confidence 66654332211000 00 00112222222222 2246667777643 22334444444322 455554
Q ss_pred EEeCCCCCCCchhhhhhhHHHHHh--cCCCeEeeCcCChhh---hcCCCCcccccc-----------ccchhhHHHHHHc
Q 011490 314 VIRPGDQAKGLEDWLLAEKFEERI--EGRGLLIRGWAPQVV---ILSHPAIGGFLT-----------HCGWNSVLEAVSN 377 (484)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~~~~~~~--~~~nv~~~~~~pq~~---ll~~~~~~~~I~-----------HgG~~s~~eal~~ 377 (484)
+ |.+. ..+.+.... ..+++.+.+|+|+.+ ++..+++ +|. -|.-+++.||+++
T Consensus 235 ~-G~g~---------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~ 302 (394)
T 3okp_A 235 V-GSGR---------YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQAC 302 (394)
T ss_dssp E-CCCT---------THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHT
T ss_pred E-cCch---------HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHc
Confidence 4 4332 112222211 146899999997544 7888898 776 4556789999999
Q ss_pred CCCEeccccccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHH
Q 011490 378 GLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGET 457 (484)
Q Consensus 378 GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~ 457 (484)
|+|+|+.+..+ ....+ +. |.|..++.. +.+++.++|.++++|++..+.+.+++++..+.
T Consensus 303 G~PvI~~~~~~----~~e~i-~~-~~g~~~~~~---------------d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 361 (394)
T 3okp_A 303 GVPVIAGTSGG----APETV-TP-ATGLVVEGS---------------DVDKLSELLIELLDDPIRRAAMGAAGRAHVEA 361 (394)
T ss_dssp TCCEEECSSTT----GGGGC-CT-TTEEECCTT---------------CHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeCCCC----hHHHH-hc-CCceEeCCC---------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 99999977543 22233 23 367777544 79999999999999886666666666655443
Q ss_pred HHHHHhhCCChHHHHHHHHHHHHh
Q 011490 458 AKTAIEEGGSSYLNIKLLIKDILQ 481 (484)
Q Consensus 458 ~~~~~~~gg~~~~~~~~~~~~~~~ 481 (484)
.-+.....+++.+.+.+
T Consensus 362 -------~~s~~~~~~~~~~~~~~ 378 (394)
T 3okp_A 362 -------EWSWEIMGERLTNILQS 378 (394)
T ss_dssp -------HTBHHHHHHHHHHHHHS
T ss_pred -------hCCHHHHHHHHHHHHHH
Confidence 22333555566555554
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.40 E-value=1.9e-12 Score=127.21 Aligned_cols=130 Identities=16% Similarity=0.203 Sum_probs=85.2
Q ss_pred CcEEEEecCCCccCCHHHHHHHHHHHHhC-----CCCEEEEEeCCCCCCCchhhhhhhHHHHHhc-CCCeEeeCcCCh--
Q 011490 279 GSAVYVCLGSLCDSSTRQLIELGLGLEAT-----KKPFIWVIRPGDQAKGLEDWLLAEKFEERIE-GRGLLIRGWAPQ-- 350 (484)
Q Consensus 279 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~-~~nv~~~~~~pq-- 350 (484)
+++|+++.|...... .+..+++|++.. +.++++..+.+.. +-+.+..... .+++.+.+++++
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~--------~~~~l~~~~~~~~~v~~~g~~g~~~ 267 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNPV--------VREAVFPVLKGVRNFVLLDPLEYGS 267 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCHH--------HHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCHH--------HHHHHHHHhccCCCEEEECCCCHHH
Confidence 347777777653321 345566666532 4555554453310 1122222222 358988866665
Q ss_pred -hhhcCCCCccccccccchhhHHHHHHcCCCEeccccccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHH
Q 011490 351 -VVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKED 429 (484)
Q Consensus 351 -~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~ 429 (484)
..++..+++ ||+++| |.+.||+++|+|+|+.+..+++... + +.|.|+.++ .++++
T Consensus 268 ~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~---~--~~g~g~lv~----------------~d~~~ 323 (376)
T 1v4v_A 268 MAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG---L--KAGILKLAG----------------TDPEG 323 (376)
T ss_dssp HHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---H--HHTSEEECC----------------SCHHH
T ss_pred HHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh---h--cCCceEECC----------------CCHHH
Confidence 478999999 999884 4466999999999999876666652 3 457787662 37899
Q ss_pred HHHHHHHHhcCCh
Q 011490 430 VKKAINMLMDEGE 442 (484)
Q Consensus 430 l~~ai~~vl~~~~ 442 (484)
|.++|.++++|++
T Consensus 324 la~~i~~ll~d~~ 336 (376)
T 1v4v_A 324 VYRVVKGLLENPE 336 (376)
T ss_dssp HHHHHHHHHTCHH
T ss_pred HHHHHHHHHhChH
Confidence 9999999999873
No 27
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.38 E-value=2.7e-10 Score=114.07 Aligned_cols=99 Identities=17% Similarity=0.118 Sum_probs=75.2
Q ss_pred CCCeEeeCcCCh---hhhcCCCCcccccccc----chhhHHHHHHcCCCEeccccccchhhHHHHHHHHhcceeEeccCC
Q 011490 339 GRGLLIRGWAPQ---VVILSHPAIGGFLTHC----GWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAER 411 (484)
Q Consensus 339 ~~nv~~~~~~pq---~~ll~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~ 411 (484)
.+++.+.+++|+ ..++..+++ +|... .-++++||+++|+|+|+.+. ......+ +..+.|..++..
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~~~~- 376 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAV-AEGETGLLVDGH- 376 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHS-CBTTTEEEESSC-
T ss_pred CCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHh-hCCCcEEECCCC-
Confidence 468999999986 457888998 77543 34689999999999999754 3455555 455678777544
Q ss_pred CCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHH
Q 011490 412 PPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAK 459 (484)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~ 459 (484)
+.+++.++|.++++|++..+.+.+++++..+.+.
T Consensus 377 --------------d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s 410 (438)
T 3c48_A 377 --------------SPHAWADALATLLDDDETRIRMGEDAVEHARTFS 410 (438)
T ss_dssp --------------CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCC
Confidence 7899999999999988777777777777766533
No 28
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.35 E-value=8.1e-11 Score=116.51 Aligned_cols=321 Identities=11% Similarity=0.094 Sum_probs=170.0
Q ss_pred CcEEEEEcCC---C-CCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCC
Q 011490 8 QLHFILFPFL---A-QGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGC 83 (484)
Q Consensus 8 ~~kil~~~~~---~-~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~ 83 (484)
+|||++++.. . .|.-.-...|+++|+++||+|++++............. .. + ++..++. ...
T Consensus 20 ~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~----~~-~-~~~~~~~-------~~~- 85 (406)
T 2gek_A 20 HMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVV----SG-G-KAVPIPY-------NGS- 85 (406)
T ss_dssp -CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEE----EC-C-CCC---------------
T ss_pred cceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccc----cC-C-cEEeccc-------cCC-
Confidence 6899999842 2 45568899999999999999999987643221111000 00 0 1111110 000
Q ss_pred CccCCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC--cchHHHHHHcCCCcEEEecchHHHHHHHHhhh
Q 011490 84 ESWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCL--PWTVSSACKFNVPRIVFHGFSCFCLLCLHSLS 161 (484)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~--~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~~ 161 (484)
.....+. ......+.+++++ .+||+|++.... ..+..++...++|++.......
T Consensus 86 -----~~~~~~~-------~~~~~~l~~~l~~--~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~---------- 141 (406)
T 2gek_A 86 -----VARLRFG-------PATHRKVKKWIAE--GDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTST---------- 141 (406)
T ss_dssp ----------CC-------HHHHHHHHHHHHH--HCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCC----------
T ss_pred -----ccccccc-------HHHHHHHHHHHHh--cCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcc----------
Confidence 0000000 0122456677777 799999987743 2345677778999987533210
Q ss_pred hcccCCCCCCCCcccccCCCCCccccccccCchhhh-hhhhHHHHHHhhhcccEEEeccccccCHHHHHHHHhccC-Cce
Q 011490 162 VSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILK-LKSFGEPILAAEMASYGVIVNSFEEMEPAYVEEYKNARD-GKV 239 (484)
Q Consensus 162 ~~~~~~~~~~~~~~~~~Pg~~~~~~l~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~-~~~ 239 (484)
+. . .... +...+. .....++.++..+-... +.+...++ .++
T Consensus 142 --------------------~~------~---~~~~~~~~~~~---~~~~~~d~ii~~s~~~~-----~~~~~~~~~~~~ 184 (406)
T 2gek_A 142 --------------------TK------S---LTLSVFQGILR---PYHEKIIGRIAVSDLAR-----RWQMEALGSDAV 184 (406)
T ss_dssp --------------------CS------H---HHHHHHHSTTH---HHHTTCSEEEESSHHHH-----HHHHHHHSSCEE
T ss_pred --------------------hh------h---hhHHHHHHHHH---HHHhhCCEEEECCHHHH-----HHHHHhcCCCcE
Confidence 00 0 0000 111111 23456666666663321 12222233 234
Q ss_pred EEeCcccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCC-ccCCHHHHHHHHHHHHhC-----CCCEEE
Q 011490 240 WCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSL-CDSSTRQLIELGLGLEAT-----KKPFIW 313 (484)
Q Consensus 240 ~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~-~~~~~~~~~~~~~al~~~-----~~~~i~ 313 (484)
.+.+.+.... .. . ...-..+ . .+ ..+++..|+. .. .+.+..+++++... +.+++
T Consensus 185 -vi~~~v~~~~--~~----~------~~~~~~~-~--~~-~~~i~~~G~~~~~--~Kg~~~li~a~~~l~~~~~~~~l~- 244 (406)
T 2gek_A 185 -EIPNGVDVAS--FA----D------APLLDGY-P--RE-GRTVLFLGRYDEP--RKGMAVLLAALPKLVARFPDVEIL- 244 (406)
T ss_dssp -ECCCCBCHHH--HH----T------CCCCTTC-S--CS-SCEEEEESCTTSG--GGCHHHHHHHHHHHHTTSTTCEEE-
T ss_pred -EecCCCChhh--cC----C------Cchhhhc-c--CC-CeEEEEEeeeCcc--ccCHHHHHHHHHHHHHHCCCeEEE-
Confidence 4443221100 00 0 0000000 0 01 2356667776 32 23334444444432 44444
Q ss_pred EEeCCCCCCCchhhhhhhHHHHHhc--CCCeEeeCcCCh---hhhcCCCCccccccc----cch-hhHHHHHHcCCCEec
Q 011490 314 VIRPGDQAKGLEDWLLAEKFEERIE--GRGLLIRGWAPQ---VVILSHPAIGGFLTH----CGW-NSVLEAVSNGLPMVT 383 (484)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~~~~~~~~--~~nv~~~~~~pq---~~ll~~~~~~~~I~H----gG~-~s~~eal~~GvP~l~ 383 (484)
.+|.+. . +.+..... .+++.+.+++++ ..++..+++ +|.- .|. +++.||+++|+|+|+
T Consensus 245 i~G~~~---------~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~ 312 (406)
T 2gek_A 245 IVGRGD---------E-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVA 312 (406)
T ss_dssp EESCSC---------H-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEE
T ss_pred EEcCCc---------H-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEE
Confidence 344432 2 22222222 578999999996 468889998 7643 343 489999999999999
Q ss_pred cccccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHH
Q 011490 384 WPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYG 455 (484)
Q Consensus 384 ~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~ 455 (484)
.+. ......+ +..+.|...+.. +.+++.++|.++++|++..+.+.+++++..
T Consensus 313 ~~~----~~~~e~i-~~~~~g~~~~~~---------------d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~ 364 (406)
T 2gek_A 313 SDL----DAFRRVL-ADGDAGRLVPVD---------------DADGMAAALIGILEDDQLRAGYVARASERV 364 (406)
T ss_dssp CCC----HHHHHHH-TTTTSSEECCTT---------------CHHHHHHHHHHHHHCHHHHHHHHHHHHHHG
T ss_pred ecC----CcHHHHh-cCCCceEEeCCC---------------CHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 765 4555566 455678777544 789999999999998755555555555443
No 29
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.33 E-value=1e-09 Score=109.55 Aligned_cols=165 Identities=16% Similarity=0.159 Sum_probs=100.9
Q ss_pred EEEEecCCCc-c-CCHHHHHHHHHHHHh----CCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChh---
Q 011490 281 AVYVCLGSLC-D-SSTRQLIELGLGLEA----TKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQV--- 351 (484)
Q Consensus 281 ~V~vs~GS~~-~-~~~~~~~~~~~al~~----~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~--- 351 (484)
.+++..|+.. . ...+.+.+.+..+.. .+.++++ +|.+... ..+. + ..+..+. +.++.+.+|+|+.
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i-~G~g~~~--~~~~-l-~~~~~~~-~~~~~~~g~~~~~~~~ 325 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFII-IGKGDPE--LEGW-A-RSLEEKH-GNVKVITEMLSREFVR 325 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEE-ECCCCHH--HHHH-H-HHHHHHC-TTEEEECSCCCHHHHH
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEE-EcCCChh--HHHH-H-HHHHhhc-CCEEEEcCCCCHHHHH
Confidence 6777788876 3 234444444444444 2344443 3433210 0010 1 1122222 2566678889975
Q ss_pred hhcCCCCccccccc----cchhhHHHHHHcCCCEeccccccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCH
Q 011490 352 VILSHPAIGGFLTH----CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKK 427 (484)
Q Consensus 352 ~ll~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~ 427 (484)
.++..+++ +|.- |--++++||+++|+|+|+... ......+ + .|.|..++.. +.
T Consensus 326 ~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~-~-~~~g~~~~~~---------------d~ 382 (439)
T 3fro_A 326 ELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-T-NETGILVKAG---------------DP 382 (439)
T ss_dssp HHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHC-C-TTTCEEECTT---------------CH
T ss_pred HHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeE-E-cCceEEeCCC---------------CH
Confidence 47888988 7743 334689999999999999643 4444444 2 4688887654 78
Q ss_pred HHHHHHHHHHhc-CChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHhh
Q 011490 428 EDVKKAINMLMD-EGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQQ 482 (484)
Q Consensus 428 ~~l~~ai~~vl~-~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 482 (484)
+++.++|.++++ |++..+.+.+++++..+. -+-...++++.+.+.+.
T Consensus 383 ~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~--------~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 383 GELANAILKALELSRSDLSKFRENCKKRAMS--------FSWEKSAERYVKAYTGS 430 (439)
T ss_dssp HHHHHHHHHHHHHTTTTTHHHHHHHHHHHHT--------SCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh--------CcHHHHHHHHHHHHHHH
Confidence 999999999999 887777777777766533 33345556666655543
No 30
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.33 E-value=3.5e-10 Score=115.42 Aligned_cols=151 Identities=14% Similarity=0.133 Sum_probs=93.5
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHhCC-----CCEEEEEeCCCCC----CC--------chhhhhhhHHHHHhcCCCeE
Q 011490 281 AVYVCLGSLCDSSTRQLIELGLGLEATK-----KPFIWVIRPGDQA----KG--------LEDWLLAEKFEERIEGRGLL 343 (484)
Q Consensus 281 ~V~vs~GS~~~~~~~~~~~~~~al~~~~-----~~~i~~~~~~~~~----~~--------~~~~~l~~~~~~~~~~~nv~ 343 (484)
.+++..|+... .+.+..+++|++... ...++.+|..... .. ..+ +-....+.-..++|.
T Consensus 263 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~--l~~~~~~~~l~~~V~ 338 (499)
T 2r60_A 263 PAIIASSRLDQ--KKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGK--IIELIDNNDCRGKVS 338 (499)
T ss_dssp CEEEECSCCCG--GGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHH--HHHHHHHTTCBTTEE
T ss_pred cEEEEeecCcc--ccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHH--HHHHHHhcCCCceEE
Confidence 45667777643 345666777777653 2235555552111 00 111 111111111256899
Q ss_pred eeCcCChh---hhcCCC----Ccccccccc---c-hhhHHHHHHcCCCEeccccccchhhHHHHHHHHhcceeEeccCCC
Q 011490 344 IRGWAPQV---VILSHP----AIGGFLTHC---G-WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERP 412 (484)
Q Consensus 344 ~~~~~pq~---~ll~~~----~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~ 412 (484)
+.+++|+. .++..+ ++ +|.-. | -++++||+++|+|+|+... ......+ +.-..|..++..
T Consensus 339 ~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~~~~-- 409 (499)
T 2r60_A 339 MFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLVDPE-- 409 (499)
T ss_dssp EEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEECTT--
T ss_pred ECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEeCCC--
Confidence 99999854 477788 87 76432 3 3589999999999999753 3444555 355578877654
Q ss_pred CCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHH
Q 011490 413 PSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGET 457 (484)
Q Consensus 413 ~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~ 457 (484)
+.+++.++|.++++|++..+.+.+++++..+.
T Consensus 410 -------------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~ 441 (499)
T 2r60_A 410 -------------DPEDIARGLLKAFESEETWSAYQEKGKQRVEE 441 (499)
T ss_dssp -------------CHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred -------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 78999999999999886666666666554443
No 31
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.31 E-value=1.1e-11 Score=121.93 Aligned_cols=140 Identities=15% Similarity=0.155 Sum_probs=88.9
Q ss_pred CCcEEEEecCCCccCCHHHHHHHHHHHHhC-----CCCEEEEEeCCCCCCCchhhhhhhHHHHHhc-CCCeEeeCcCCh-
Q 011490 278 PGSAVYVCLGSLCDSSTRQLIELGLGLEAT-----KKPFIWVIRPGDQAKGLEDWLLAEKFEERIE-GRGLLIRGWAPQ- 350 (484)
Q Consensus 278 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~-~~nv~~~~~~pq- 350 (484)
++++|+++.|+..... +.+..+++|+... +.++++..+.+. . +-+.+.+... .+++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~------~--~~~~l~~~~~~~~~v~~~g~~~~~ 274 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP------N--VREPVNRILGHVKNVILIDPQEYL 274 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH------H--HHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH------H--HHHHHHHHhhcCCCEEEeCCCCHH
Confidence 3457888888765432 3344555555432 455555434321 0 1122222222 368998777764
Q ss_pred --hhhcCCCCccccccccchhhHHHHHHcCCCEeccccccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHH
Q 011490 351 --VVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKE 428 (484)
Q Consensus 351 --~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~ 428 (484)
..++..+++ +|+..|. .++||+++|+|+|+.+..++... +. +.|.|+.++ .+++
T Consensus 275 ~~~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~e----~v-~~g~g~lv~----------------~d~~ 330 (384)
T 1vgv_A 275 PFVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERPE----AV-TAGTVRLVG----------------TDKQ 330 (384)
T ss_dssp HHHHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSCHH----HH-HHTSEEEEC----------------SSHH
T ss_pred HHHHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCcch----hh-hCCceEEeC----------------CCHH
Confidence 568899999 9998853 48899999999999987544433 32 457887773 2789
Q ss_pred HHHHHHHHHhcCChhHHHHHHH
Q 011490 429 DVKKAINMLMDEGEERDERRRR 450 (484)
Q Consensus 429 ~l~~ai~~vl~~~~~~~~~r~~ 450 (484)
+|.++|.++++|++..+++.++
T Consensus 331 ~la~~i~~ll~d~~~~~~~~~~ 352 (384)
T 1vgv_A 331 RIVEEVTRLLKDENEYQAMSRA 352 (384)
T ss_dssp HHHHHHHHHHHCHHHHHHHHSS
T ss_pred HHHHHHHHHHhChHHHhhhhhc
Confidence 9999999999987444444333
No 32
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.22 E-value=4.2e-09 Score=103.82 Aligned_cols=330 Identities=12% Similarity=0.073 Sum_probs=172.0
Q ss_pred CcEEEEEcCCCC-CCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCCcc
Q 011490 8 QLHFILFPFLAQ-GHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESW 86 (484)
Q Consensus 8 ~~kil~~~~~~~-GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~ 86 (484)
++++....+|.. |.-.-...|+++|+++||+|++++...... ... ...++.+..++.+.. +.
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~-------~~~~i~~~~~~~~~~----~~----- 77 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LNK-------VYPNIYFHEVTVNQY----SV----- 77 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----C-------CCTTEEEECCCCC-------------
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-ccc-------cCCceEEEecccccc----cc-----
Confidence 578888888865 455677899999999999999998753211 100 122566665442110 00
Q ss_pred CCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCCc--chHHHHHH-c--CCCcEEEecchHHHHHHHHhhh
Q 011490 87 DKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCLP--WTVSSACK-F--NVPRIVFHGFSCFCLLCLHSLS 161 (484)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~--~a~~~A~~-l--gIP~v~~~~~~~~~~~~~~~~~ 161 (484)
... ... .+ .....+.+++++ .+||+|++..... .+..++.. + ++|+|..........
T Consensus 78 --~~~-~~~-~~-----~~~~~l~~~l~~--~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------- 139 (394)
T 2jjm_A 78 --FQY-PPY-DL-----ALASKMAEVAQR--ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITV------- 139 (394)
T ss_dssp --CCS-CCH-HH-----HHHHHHHHHHHH--HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHT-------
T ss_pred --ccc-ccc-cH-----HHHHHHHHHHHH--cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccc-------
Confidence 000 001 11 112345666777 7999999876432 22334443 3 599887433321100
Q ss_pred hcccCCCCCCCCcccccCCCCCccccccccCchhhhhhhhHHHHHHhhhcccEEEeccccccCHHHHHHHHhccC--Cce
Q 011490 162 VSKAHESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAEMASYGVIVNSFEEMEPAYVEEYKNARD--GKV 239 (484)
Q Consensus 162 ~~~~~~~~~~~~~~~~~Pg~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~--~~~ 239 (484)
.+... . +... .......++.++..|-.. .+.+...++ .++
T Consensus 140 -----------------~~~~~-----------~--~~~~---~~~~~~~ad~ii~~s~~~-----~~~~~~~~~~~~~~ 181 (394)
T 2jjm_A 140 -----------------LGSDP-----------S--LNNL---IRFGIEQSDVVTAVSHSL-----INETHELVKPNKDI 181 (394)
T ss_dssp -----------------TTTCT-----------T--THHH---HHHHHHHSSEEEESCHHH-----HHHHHHHTCCSSCE
T ss_pred -----------------cCCCH-----------H--HHHH---HHHHHhhCCEEEECCHHH-----HHHHHHhhCCcccE
Confidence 00000 0 0001 112334566666665332 122333222 356
Q ss_pred EEeCcccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHh----CCCCEEEEE
Q 011490 240 WCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDSSTRQLIELGLGLEA----TKKPFIWVI 315 (484)
Q Consensus 240 ~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~----~~~~~i~~~ 315 (484)
..+.+-+...... . .....+.+.+...+ +..+++..|+... .+.+..++++++. .+.++ +.+
T Consensus 182 ~vi~ngv~~~~~~---------~-~~~~~~~~~~~~~~-~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l-~i~ 247 (394)
T 2jjm_A 182 QTVYNFIDERVYF---------K-RDMTQLKKEYGISE-SEKILIHISNFRK--VKRVQDVVQAFAKIVTEVDAKL-LLV 247 (394)
T ss_dssp EECCCCCCTTTCC---------C-CCCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCCEE-EEE
T ss_pred EEecCCccHHhcC---------C-cchHHHHHHcCCCC-CCeEEEEeecccc--ccCHHHHHHHHHHHHhhCCCEE-EEE
Confidence 6665433221100 0 00111222222111 2245556677653 2334444444443 24444 444
Q ss_pred eCCCCCCCchhhhhhhHHHHHhc----CCCeEeeCcCCh-hhhcCCCCccccc----cccchhhHHHHHHcCCCEecccc
Q 011490 316 RPGDQAKGLEDWLLAEKFEERIE----GRGLLIRGWAPQ-VVILSHPAIGGFL----THCGWNSVLEAVSNGLPMVTWPF 386 (484)
Q Consensus 316 ~~~~~~~~~~~~~l~~~~~~~~~----~~nv~~~~~~pq-~~ll~~~~~~~~I----~HgG~~s~~eal~~GvP~l~~P~ 386 (484)
|.+... +.+..... .+++.+.++..+ ..++..+++ +| .-|.-+++.||+++|+|+|+.+.
T Consensus 248 G~g~~~---------~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~ 316 (394)
T 2jjm_A 248 GDGPEF---------CTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRV 316 (394)
T ss_dssp CCCTTH---------HHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECC
T ss_pred CCchHH---------HHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecC
Confidence 433211 12222211 357888777553 568989998 77 45566789999999999999875
Q ss_pred ccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHH
Q 011490 387 FADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYG 455 (484)
Q Consensus 387 ~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~ 455 (484)
.+ ....+ +..+.|..++.. +.+++.++|.++++|++..+.+.+++++..
T Consensus 317 ~~----~~e~v-~~~~~g~~~~~~---------------d~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 365 (394)
T 2jjm_A 317 GG----IPEVI-QHGDTGYLCEVG---------------DTTGVADQAIQLLKDEELHRNMGERARESV 365 (394)
T ss_dssp TT----STTTC-CBTTTEEEECTT---------------CHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CC----hHHHh-hcCCceEEeCCC---------------CHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 32 23333 344567777544 789999999999998865566666666554
No 33
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.19 E-value=1.1e-10 Score=115.14 Aligned_cols=326 Identities=11% Similarity=0.096 Sum_probs=167.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHC-CCeEEEEeCCCchhhhhHHHhhcccCCCceEE-EEeeCCCccCCCCCCCCc
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQH-GALVTIVTTPMNAARFQNVIERGIQSGLRIQV-IEFYFPCQEVGLPEGCES 85 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~r-Gh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~-~~i~~~~~~~~~~~~~~~ 85 (484)
.+||++++ ++.....=+-.|.++|+++ |+++.++.+....+......+. .+++. +.+. +..
T Consensus 25 m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~-----~~i~~~~~l~-------~~~---- 87 (396)
T 3dzc_A 25 MKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLEL-----FSITPDFDLN-------IME---- 87 (396)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHH-----TTCCCSEECC-------CCC----
T ss_pred CCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHh-----cCCCCceeee-------cCC----
Confidence 35777776 7777888889999999998 7888755543322211121111 12210 0111 100
Q ss_pred cCCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecC--CC-cchHHHHHHcCCCcEEEecchHHHHHHHHhhhh
Q 011490 86 WDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDV--CL-PWTVSSACKFNVPRIVFHGFSCFCLLCLHSLSV 162 (484)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~--~~-~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~ 162 (484)
....... ........+.+++++ .+||+|++-. .. +.+..+|.++|||++.+..
T Consensus 88 ----~~~~~~~----~~~~~~~~l~~~l~~--~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~a-------------- 143 (396)
T 3dzc_A 88 ----PGQTLNG----VTSKILLGMQQVLSS--EQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEA-------------- 143 (396)
T ss_dssp ----TTCCHHH----HHHHHHHHHHHHHHH--HCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETC--------------
T ss_pred ----CCCCHHH----HHHHHHHHHHHHHHh--cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEEC--------------
Confidence 0001111 223445667788888 8999999744 22 3456789999999875311
Q ss_pred cccCCCCCCCCcccccCCCCCcccccc-ccCchhhhhhhhHHHHHHhhhcccEEEeccccccCHHHHHHHH-hccC-Cce
Q 011490 163 SKAHESVSSDSEYFLVPGLPDRVEITK-AQLPEILKLKSFGEPILAAEMASYGVIVNSFEEMEPAYVEEYK-NARD-GKV 239 (484)
Q Consensus 163 ~~~~~~~~~~~~~~~~Pg~~~~~~l~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~-~~~~-~~~ 239 (484)
|+.. ... ...+ ....+.+.. ..++.++..+-. ..+.+. ...+ .++
T Consensus 144 -----------------g~rs---~~~~~~~~-----~~~~r~~~~--~~a~~~~~~se~-----~~~~l~~~G~~~~ki 191 (396)
T 3dzc_A 144 -----------------GLRT---GNIYSPWP-----EEGNRKLTA--ALTQYHFAPTDT-----SRANLLQENYNAENI 191 (396)
T ss_dssp -----------------CCCC---SCTTSSTT-----HHHHHHHHH--HTCSEEEESSHH-----HHHHHHHTTCCGGGE
T ss_pred -----------------Cccc---cccccCCc-----HHHHHHHHH--HhcCEEECCCHH-----HHHHHHHcCCCcCcE
Confidence 0000 000 0000 111111111 223444444321 111221 1222 358
Q ss_pred EEeCcccCCCc-ccchhhccCCCCCCCCcccccccCC-CCCCcEEEEecCCCccCCHHHHHHHHHHHHh-----CCCCEE
Q 011490 240 WCVGPVSLCNK-EDIDKLERGDKTSNDGSGCLKWLDS-WQPGSAVYVCLGSLCDSSTRQLIELGLGLEA-----TKKPFI 312 (484)
Q Consensus 240 ~~vGp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i 312 (484)
..+|....+.. .......... ...+++.+.+.. .+++++|+++.+-..+.. +.+..+++|++. .+.+++
T Consensus 192 ~vvGn~~~d~~~~~~~~~~~~~---~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~-~~~~~ll~A~~~l~~~~~~~~~v 267 (396)
T 3dzc_A 192 FVTGNTVIDALLAVREKIHTDM---DLQATLESQFPMLDASKKLILVTGHRRESFG-GGFERICQALITTAEQHPECQIL 267 (396)
T ss_dssp EECCCHHHHHHHHHHHHHHHCH---HHHHHHHHTCTTCCTTSEEEEEECSCBCCCT-THHHHHHHHHHHHHHHCTTEEEE
T ss_pred EEECCcHHHHHHHhhhhcccch---hhHHHHHHHhCccCCCCCEEEEEECCcccch-hHHHHHHHHHHHHHHhCCCceEE
Confidence 88884322110 0000000000 000122223321 233457777663222222 224556666654 245666
Q ss_pred EEEeCCCCCCCchhhhhhhHHHHHh-cCCCeEeeCcCC---hhhhcCCCCccccccccchhhHHHHHHcCCCEecccccc
Q 011490 313 WVIRPGDQAKGLEDWLLAEKFEERI-EGRGLLIRGWAP---QVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFA 388 (484)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~~~~~~~-~~~nv~~~~~~p---q~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~ 388 (484)
+..+.+. . +-+.+.+.. ..+++.+.++++ ...++..+++ +|+..| |.+.||+++|+|+|+..-..
T Consensus 268 ~~~g~~~---~-----~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~ 336 (396)
T 3dzc_A 268 YPVHLNP---N-----VREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETT 336 (396)
T ss_dssp EECCBCH---H-----HHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSC
T ss_pred EEeCCCh---H-----HHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCC
Confidence 6655331 0 122222221 246898888775 4568889999 999988 66679999999999986555
Q ss_pred chhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCCh
Q 011490 389 DQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGE 442 (484)
Q Consensus 389 DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 442 (484)
+++. +. +.|.++.+ . .++++|.+++.++++|++
T Consensus 337 ~~~e----~v-~~G~~~lv--~--------------~d~~~l~~ai~~ll~d~~ 369 (396)
T 3dzc_A 337 ERPE----AV-AAGTVKLV--G--------------TNQQQICDALSLLLTDPQ 369 (396)
T ss_dssp SCHH----HH-HHTSEEEC--T--------------TCHHHHHHHHHHHHHCHH
T ss_pred cchH----HH-HcCceEEc--C--------------CCHHHHHHHHHHHHcCHH
Confidence 5432 33 56777544 2 368999999999999873
No 34
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.16 E-value=1.2e-10 Score=115.02 Aligned_cols=319 Identities=12% Similarity=0.079 Sum_probs=165.1
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHC--CCeEEEEeCCCchhhhhHHHhhcccCCCceEE-EEeeCCCccCCCCCCCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQH--GALVTIVTTPMNAARFQNVIERGIQSGLRIQV-IEFYFPCQEVGLPEGCE 84 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~r--Gh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~-~~i~~~~~~~~~~~~~~ 84 (484)
++||++++ ++.....=+-.|.++|+++ |+++.++.+....+.....++ ..+++. +.+. +...
T Consensus 27 ~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~-----~~~i~~~~~l~-------v~~~-- 91 (403)
T 3ot5_A 27 KIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLE-----IFDIKPDIDLD-------IMKK-- 91 (403)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHH-----HTTCCCSEECC-------CCC---
T ss_pred cceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHH-----hcCCCCCcccc-------cCCC--
Confidence 57888877 6776777779999999998 688775554322111111111 012211 1110 1000
Q ss_pred ccCCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCC---CcchHHHHHHcCCCcEEEecchHHHHHHHHhhh
Q 011490 85 SWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVC---LPWTVSSACKFNVPRIVFHGFSCFCLLCLHSLS 161 (484)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~---~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~~ 161 (484)
..... .........+.+++++ .+||+|++-.- .+++..+|.++|||++.+..
T Consensus 92 ------~~~~~----~~~~~~~~~l~~~l~~--~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~a------------- 146 (403)
T 3ot5_A 92 ------GQTLA----EITSRVMNGINEVIAA--ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEA------------- 146 (403)
T ss_dssp ------CCCHH----HHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESC-------------
T ss_pred ------CCCHH----HHHHHHHHHHHHHHHH--cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEEC-------------
Confidence 00111 1233445667788888 89999997442 23456889999999875321
Q ss_pred hcccCCCCCCCCcccccCCCCCcccccc-ccCchhhhhhhhHHHHHHhhhcccEEEeccccccCHHHHHHHH-hcc-CCc
Q 011490 162 VSKAHESVSSDSEYFLVPGLPDRVEITK-AQLPEILKLKSFGEPILAAEMASYGVIVNSFEEMEPAYVEEYK-NAR-DGK 238 (484)
Q Consensus 162 ~~~~~~~~~~~~~~~~~Pg~~~~~~l~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~-~~~-~~~ 238 (484)
|+.. ... ...+ ....+.+.. .-++.++..+-. ..+.+. ... +.+
T Consensus 147 ------------------glrs---~~~~~~~p-----~~~~r~~~~--~~a~~~~~~se~-----~~~~l~~~Gi~~~~ 193 (403)
T 3ot5_A 147 ------------------GLRT---WNKYSPFP-----EEMNRQLTG--VMADIHFSPTKQ-----AKENLLAEGKDPAT 193 (403)
T ss_dssp ------------------CCCC---SCTTSSTT-----HHHHHHHHH--HHCSEEEESSHH-----HHHHHHHTTCCGGG
T ss_pred ------------------Cccc---cccccCCc-----HHHHHHHHH--HhcCEEECCCHH-----HHHHHHHcCCCccc
Confidence 0000 000 0000 011111111 113333433321 111221 122 246
Q ss_pred eEEeCcccCCCcccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHh-----CCCCEEE
Q 011490 239 VWCVGPVSLCNKEDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDSSTRQLIELGLGLEA-----TKKPFIW 313 (484)
Q Consensus 239 ~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~ 313 (484)
+..+|....+..... ... ....+..+.+ +++++++++.|...... +.+..+++++.. .+.++|+
T Consensus 194 i~vvGn~~~D~~~~~-----~~~--~~~~~~~~~l---~~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~ 262 (403)
T 3ot5_A 194 IFVTGNTAIDALKTT-----VQK--DYHHPILENL---GDNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVY 262 (403)
T ss_dssp EEECCCHHHHHHHHH-----SCT--TCCCHHHHSC---TTCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEE
T ss_pred EEEeCCchHHHHHhh-----hhh--hcchHHHHhc---cCCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEE
Confidence 888885322110000 000 0011222222 34457777766432211 124455555543 2456666
Q ss_pred EEeCCCCCCCchhhhhhhHHHHHh-cCCCeEeeCcCCh---hhhcCCCCccccccccchhhHHHHHHcCCCEeccccccc
Q 011490 314 VIRPGDQAKGLEDWLLAEKFEERI-EGRGLLIRGWAPQ---VVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFAD 389 (484)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~~~~~~~-~~~nv~~~~~~pq---~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~D 389 (484)
..+++. . +-+.+.+.. ..+++.+.+++++ ..++..+++ +|+..|.. +.||+++|+|+|++|-..+
T Consensus 263 ~~~~~~---~-----~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~-~~EA~a~g~PvV~~~~~~~ 331 (403)
T 3ot5_A 263 PMHLNP---A-----VREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGV-QEEAPGMGVPVLVLRDTTE 331 (403)
T ss_dssp ECCSCH---H-----HHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCHHH-HHHGGGTTCCEEECCSSCS
T ss_pred ecCCCH---H-----HHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCccH-HHHHHHhCCCEEEecCCCc
Confidence 655431 0 112222211 2468999999863 568888998 99887532 3699999999999976666
Q ss_pred hhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCCh
Q 011490 390 QFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGE 442 (484)
Q Consensus 390 Q~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 442 (484)
++. +. +.|.|+.+. .++++|.+++.++++|++
T Consensus 332 ~~e----~v-~~g~~~lv~----------------~d~~~l~~ai~~ll~~~~ 363 (403)
T 3ot5_A 332 RPE----GI-EAGTLKLIG----------------TNKENLIKEALDLLDNKE 363 (403)
T ss_dssp CHH----HH-HHTSEEECC----------------SCHHHHHHHHHHHHHCHH
T ss_pred chh----he-eCCcEEEcC----------------CCHHHHHHHHHHHHcCHH
Confidence 654 22 568776652 378999999999998873
No 35
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.15 E-value=2.2e-08 Score=97.68 Aligned_cols=148 Identities=14% Similarity=0.191 Sum_probs=98.9
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHhCCC----C-EEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCCh-hhhc
Q 011490 281 AVYVCLGSLCDSSTRQLIELGLGLEATKK----P-FIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQ-VVIL 354 (484)
Q Consensus 281 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq-~~ll 354 (484)
.+++..|+... .+.+..++++++.... . -++.+|.+. . .+ +-.-.......+++.+.++..+ ..++
T Consensus 197 ~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~-~---~~--~~~~~~~~~~~~~v~~~g~~~~~~~~~ 268 (374)
T 2iw1_A 197 NLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDK-P---RK--FEALAEKLGVRSNVHFFSGRNDVSELM 268 (374)
T ss_dssp EEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSC-C---HH--HHHHHHHHTCGGGEEEESCCSCHHHHH
T ss_pred eEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCC-H---HH--HHHHHHHcCCCCcEEECCCcccHHHHH
Confidence 56667777653 3455667777776532 1 244444432 1 11 2211111112468999888654 5688
Q ss_pred CCCCcccccc----ccchhhHHHHHHcCCCEeccccccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHH
Q 011490 355 SHPAIGGFLT----HCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDV 430 (484)
Q Consensus 355 ~~~~~~~~I~----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l 430 (484)
..+++ +|. -|.-++++||+++|+|+|+.+. ..+...+ +..+.|..++.. -+.+++
T Consensus 269 ~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~~~--------------~~~~~l 327 (374)
T 2iw1_A 269 AAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYI-ADANCGTVIAEP--------------FSQEQL 327 (374)
T ss_dssp HHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHH-HHHTCEEEECSS--------------CCHHHH
T ss_pred HhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhh-ccCCceEEeCCC--------------CCHHHH
Confidence 88998 775 4566789999999999999765 3455667 577889888622 489999
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHHHHH
Q 011490 431 KKAINMLMDEGEERDERRRRAREYGET 457 (484)
Q Consensus 431 ~~ai~~vl~~~~~~~~~r~~a~~l~~~ 457 (484)
.++|.++++|++..+.+.+++++..+.
T Consensus 328 ~~~i~~l~~~~~~~~~~~~~~~~~~~~ 354 (374)
T 2iw1_A 328 NEVLRKALTQSPLRMAWAENARHYADT 354 (374)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 999999999887677777777776654
No 36
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.14 E-value=8e-09 Score=102.60 Aligned_cols=112 Identities=11% Similarity=0.005 Sum_probs=75.4
Q ss_pred CCCeEeeCcCC---h---hhhcCCCCcccccccc----chhhHHHHHHcCCCEeccccccchhhHHHHHHHHhcceeEec
Q 011490 339 GRGLLIRGWAP---Q---VVILSHPAIGGFLTHC----GWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIG 408 (484)
Q Consensus 339 ~~nv~~~~~~p---q---~~ll~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~ 408 (484)
.+++.+.+|++ + ..++..+++ +|.-. .-+++.||+++|+|+|+.+. ..+...+ +.-+.|..++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEEC
Confidence 47899988775 2 447888888 77654 45689999999999999764 3455455 3555676662
Q ss_pred cCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHh
Q 011490 409 AERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQ 481 (484)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~ 481 (484)
+.+++.++|.++++|++..+.+.+++++.... .-+....++++.+.+.+
T Consensus 365 -----------------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~-------~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 365 -----------------DANEAVEVVLYLLKHPEVSKEMGAKAKERVRK-------NFIITKHMERYLDILNS 413 (416)
T ss_dssp -----------------SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-------HTBHHHHHHHHHHHHHT
T ss_pred -----------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH-------HcCHHHHHHHHHHHHHH
Confidence 57899999999999886555666666554432 22333445555555444
No 37
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.14 E-value=1.5e-09 Score=106.17 Aligned_cols=136 Identities=11% Similarity=0.054 Sum_probs=84.1
Q ss_pred CcEEEEecCCCccCCHHHHHHHHHHHHhC-----CCCEEEEEeCCCCCCCchhhhhhhHHHHHhc-CCCeEeeCcCCh--
Q 011490 279 GSAVYVCLGSLCDSSTRQLIELGLGLEAT-----KKPFIWVIRPGDQAKGLEDWLLAEKFEERIE-GRGLLIRGWAPQ-- 350 (484)
Q Consensus 279 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~-~~nv~~~~~~pq-- 350 (484)
+++|+++.|...... +.+..+++|++.. +.++++ +.+.. . + +-+.+.+... .+++.+.+++++
T Consensus 205 ~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~g~~-~---~--~~~~~~~~~~~~~~v~~~g~~~~~~ 275 (375)
T 3beo_A 205 NRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PVHMN-P---V--VRETANDILGDYGRIHLIEPLDVID 275 (375)
T ss_dssp SEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--ECCSC-H---H--HHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred CCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eCCCC-H---H--HHHHHHHHhhccCCEEEeCCCCHHH
Confidence 456777888754322 3355566666532 344443 32211 0 1 1222222222 368998787765
Q ss_pred -hhhcCCCCccccccccchhhHHHHHHcCCCEeccccccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHH
Q 011490 351 -VVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKED 429 (484)
Q Consensus 351 -~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~ 429 (484)
..++..+++ +|+..| +.+.||+++|+|+|+.+..+..+ .+. ..|.|..++ .++++
T Consensus 276 ~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~----e~v-~~g~g~~v~----------------~d~~~ 331 (375)
T 3beo_A 276 FHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP----EGI-EAGTLKLAG----------------TDEET 331 (375)
T ss_dssp HHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH----HHH-HTTSEEECC----------------SCHHH
T ss_pred HHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc----eee-cCCceEEcC----------------CCHHH
Confidence 468889999 998874 45889999999999985433332 232 457777663 27899
Q ss_pred HHHHHHHHhcCChhHHHH
Q 011490 430 VKKAINMLMDEGEERDER 447 (484)
Q Consensus 430 l~~ai~~vl~~~~~~~~~ 447 (484)
|.++|.++++|++..+.+
T Consensus 332 la~~i~~ll~~~~~~~~~ 349 (375)
T 3beo_A 332 IFSLADELLSDKEAHDKM 349 (375)
T ss_dssp HHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHhChHhHhhh
Confidence 999999999987433333
No 38
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.99 E-value=4.6e-09 Score=102.88 Aligned_cols=319 Identities=15% Similarity=0.082 Sum_probs=170.4
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchh-hhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCCccC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAA-RFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESWD 87 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~-~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~ 87 (484)
+|++++ +|++-.+.-+-+|.++|.++ ++..++.+....+ .+..... .++++ +.|... +...
T Consensus 10 ~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~----~~~~i-----~~~~~~--l~~~----- 71 (385)
T 4hwg_A 10 LKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF----DDMGI-----RKPDYF--LEVA----- 71 (385)
T ss_dssp CEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH----C-CCC-----CCCSEE--CCCC-----
T ss_pred hheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH----hhCCC-----CCCcee--cCCC-----
Confidence 456555 48888999999999999988 8877776543222 3333211 11122 211111 1110
Q ss_pred CCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecC--CCcchHHHHHHcCCCcEEEecchHHHHHHHHhhhhccc
Q 011490 88 KLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDV--CLPWTVSSACKFNVPRIVFHGFSCFCLLCLHSLSVSKA 165 (484)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~--~~~~a~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~ 165 (484)
.... ..........+.+++++ .+||+||+-. ...++..+|.++|||++.+..
T Consensus 72 ---~~~~----~~~~~~~~~~l~~~l~~--~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ea----------------- 125 (385)
T 4hwg_A 72 ---ADNT----AKSIGLVIEKVDEVLEK--EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEA----------------- 125 (385)
T ss_dssp ---CCCS----HHHHHHHHHHHHHHHHH--HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESC-----------------
T ss_pred ---CCCH----HHHHHHHHHHHHHHHHh--cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeC-----------------
Confidence 1111 22233356667788888 8999988644 334458899999999765311
Q ss_pred CCCCCCCCcccccCCCCCccccccccCchhhhhhhhHHHHHHhhhcccEEEeccccccCHHHHHHH-HhccC-CceEEeC
Q 011490 166 HESVSSDSEYFLVPGLPDRVEITKAQLPEILKLKSFGEPILAAEMASYGVIVNSFEEMEPAYVEEY-KNARD-GKVWCVG 243 (484)
Q Consensus 166 ~~~~~~~~~~~~~Pg~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~-~~~~~-~~~~~vG 243 (484)
|+.+ ... ..| ....+.+.. .-++.++..+-. ..+.+ ....+ .+++.+|
T Consensus 126 --------------glrs---~~~-~~p-----ee~nR~~~~--~~a~~~~~~te~-----~~~~l~~~G~~~~~I~vtG 175 (385)
T 4hwg_A 126 --------------GNRC---FDQ-RVP-----EEINRKIID--HISDVNITLTEH-----ARRYLIAEGLPAELTFKSG 175 (385)
T ss_dssp --------------CCCC---SCT-TST-----HHHHHHHHH--HHCSEEEESSHH-----HHHHHHHTTCCGGGEEECC
T ss_pred --------------CCcc---ccc-cCc-----HHHHHHHHH--hhhceeecCCHH-----HHHHHHHcCCCcCcEEEEC
Confidence 1100 000 001 001112211 113333333321 11112 11222 4688888
Q ss_pred cccCCCc-ccchhhccCCCCCCCCcccccccCCCCCCcEEEEecCCCccCC-HHHHHHHHHHHHhC----CCCEEEEEeC
Q 011490 244 PVSLCNK-EDIDKLERGDKTSNDGSGCLKWLDSWQPGSAVYVCLGSLCDSS-TRQLIELGLGLEAT----KKPFIWVIRP 317 (484)
Q Consensus 244 p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~-~~~~~~~~~al~~~----~~~~i~~~~~ 317 (484)
....+.. ...... ...++.+.++-.+ ++.|+++.|...+.. .+.+..+++++... +.++|+...+
T Consensus 176 np~~D~~~~~~~~~--------~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p 246 (385)
T 4hwg_A 176 SHMPEVLDRFMPKI--------LKSDILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHP 246 (385)
T ss_dssp CSHHHHHHHHHHHH--------HHCCHHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECH
T ss_pred CchHHHHHHhhhhc--------chhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECCh
Confidence 4322110 000000 0122333333222 458888888764433 24566677776543 5677776543
Q ss_pred CCCCCCchhhhhhhHHHHH---h-cCCCeEeeCcCC---hhhhcCCCCccccccccchhhHHHHHHcCCCEeccccccch
Q 011490 318 GDQAKGLEDWLLAEKFEER---I-EGRGLLIRGWAP---QVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQ 390 (484)
Q Consensus 318 ~~~~~~~~~~~l~~~~~~~---~-~~~nv~~~~~~p---q~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ 390 (484)
. +.+.+.+. . ..+|+.+.+.++ ...++.++++ +|+-.|. .+.||.++|+|+|+++...+.
T Consensus 247 ~----------~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter 313 (385)
T 4hwg_A 247 R----------TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHER 313 (385)
T ss_dssp H----------HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSC
T ss_pred H----------HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccc
Confidence 2 11112111 1 135788766665 4568999999 9999875 469999999999999875542
Q ss_pred hhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhH
Q 011490 391 FCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEER 444 (484)
Q Consensus 391 ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~ 444 (484)
+. .+ +.|.++.+. .++++|.+++.++++|++..
T Consensus 314 ~e---~v--~~G~~~lv~----------------~d~~~i~~ai~~ll~d~~~~ 346 (385)
T 4hwg_A 314 PE---GM--DAGTLIMSG----------------FKAERVLQAVKTITEEHDNN 346 (385)
T ss_dssp TH---HH--HHTCCEECC----------------SSHHHHHHHHHHHHTTCBTT
T ss_pred hh---hh--hcCceEEcC----------------CCHHHHHHHHHHHHhChHHH
Confidence 32 13 568766552 47899999999999987433
No 39
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.98 E-value=2.5e-08 Score=96.15 Aligned_cols=125 Identities=14% Similarity=0.145 Sum_probs=81.5
Q ss_pred EEEecCCCccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChh---hhcCCCC
Q 011490 282 VYVCLGSLCDSSTRQLIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQV---VILSHPA 358 (484)
Q Consensus 282 V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~---~ll~~~~ 358 (484)
+++..|+.. ..+.+..++++++..+.+++++. .+.... . + ..+..+.. +++.+.+|+++. .++..++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G-~g~~~~---~--l-~~~~~~~~-~~v~~~g~~~~~~l~~~~~~ad 233 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAG-PAWEPE---Y--F-DEITRRYG-STVEPIGEVGGERRLDLLASAH 233 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEES-CCCCHH---H--H-HHHHHHHT-TTEEECCCCCHHHHHHHHHHCS
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEe-CcccHH---H--H-HHHHHHhC-CCEEEeccCCHHHHHHHHHhCC
Confidence 344457655 33556677788877777766654 332111 1 1 12222323 899999999975 6888999
Q ss_pred ccccccc-------------cc-hhhHHHHHHcCCCEeccccccchhhHHHHHHHH--hcceeEeccCCCCCCcccccCC
Q 011490 359 IGGFLTH-------------CG-WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQV--LRIGVTIGAERPPSLADEERNG 422 (484)
Q Consensus 359 ~~~~I~H-------------gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~--~G~g~~l~~~~~~~~~~~~~~~ 422 (484)
+ +|.. -| -++++||+++|+|+|+... ..+...+ +. -+.|..+ .
T Consensus 234 v--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~-~~~~~~~g~~~--~------------ 292 (342)
T 2iuy_A 234 A--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIV-PSVGEVVGYGT--D------------ 292 (342)
T ss_dssp E--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHG-GGGEEECCSSS--C------------
T ss_pred E--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHh-cccCCCceEEc--C------------
Confidence 8 6632 23 3689999999999999865 3355555 34 3455544 2
Q ss_pred CccCHHHHHHHHHHHhc
Q 011490 423 VPVKKEDVKKAINMLMD 439 (484)
Q Consensus 423 ~~~~~~~l~~ai~~vl~ 439 (484)
. +.+++.++|.++++
T Consensus 293 -~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 293 -F-APDEARRTLAGLPA 307 (342)
T ss_dssp -C-CHHHHHHHHHTSCC
T ss_pred -C-CHHHHHHHHHHHHH
Confidence 4 88999999999986
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.81 E-value=1.1e-06 Score=93.31 Aligned_cols=148 Identities=11% Similarity=0.083 Sum_probs=86.5
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHhC-----CCCEEEEEeCCCC-CCC------chhhhhhhHHHHHhc-CCCeEeeCc
Q 011490 281 AVYVCLGSLCDSSTRQLIELGLGLEAT-----KKPFIWVIRPGDQ-AKG------LEDWLLAEKFEERIE-GRGLLIRGW 347 (484)
Q Consensus 281 ~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~-~~~------~~~~~l~~~~~~~~~-~~nv~~~~~ 347 (484)
.+++..|.+.. .+.+..+++|++.. +.+++++.++... ..+ ... +- ....+.. .++|.+.++
T Consensus 573 ~vIl~vGRl~~--~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~--L~-~li~~lgL~~~V~flG~ 647 (816)
T 3s28_A 573 PILFTMARLDR--VKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKK--MY-DLIEEYKLNGQFRWISS 647 (816)
T ss_dssp CEEEEECCCCT--TTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHH--HH-HHHHHTTCBBBEEEECC
T ss_pred eEEEEEccCcc--cCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHH--HH-HHHHHcCCCCcEEEccC
Confidence 46667777653 34455666666654 2455544433310 000 001 11 1111222 468888875
Q ss_pred C----ChhhhcC----CCCccccccc----cchhhHHHHHHcCCCEeccccccchhhHHHHHHHHhcceeEeccCCCCCC
Q 011490 348 A----PQVVILS----HPAIGGFLTH----CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSL 415 (484)
Q Consensus 348 ~----pq~~ll~----~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~ 415 (484)
. |+.++.. .+++ +|.- |--.++.||+++|+|+|+. |.......+ +.-+.|..++..
T Consensus 648 ~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV-~dg~~Gllv~p~----- 715 (816)
T 3s28_A 648 QMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEII-VHGKSGFHIDPY----- 715 (816)
T ss_dssp CCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHC-CBTTTBEEECTT-----
T ss_pred ccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHH-ccCCcEEEeCCC-----
Confidence 4 4444443 4566 6643 2346899999999999996 444455555 355678888654
Q ss_pred cccccCCCccCHHHHHHHHHHHh----cCChhHHHHHHHHHHHH
Q 011490 416 ADEERNGVPVKKEDVKKAINMLM----DEGEERDERRRRAREYG 455 (484)
Q Consensus 416 ~~~~~~~~~~~~~~l~~ai~~vl----~~~~~~~~~r~~a~~l~ 455 (484)
+.++++++|.+++ +|++..+.+.+++++..
T Consensus 716 ----------D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a 749 (816)
T 3s28_A 716 ----------HGDQAADTLADFFTKCKEDPSHWDEISKGGLQRI 749 (816)
T ss_dssp ----------SHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred ----------CHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 7888999997666 88866666666665544
No 41
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.73 E-value=1.6e-06 Score=87.71 Aligned_cols=159 Identities=10% Similarity=-0.020 Sum_probs=91.1
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHH---hCCCCEEEEEeCCCCCCCchhhhhhhHHHHHh--cCCCeE-eeCcCCh--hh
Q 011490 281 AVYVCLGSLCDSSTRQLIELGLGLE---ATKKPFIWVIRPGDQAKGLEDWLLAEKFEERI--EGRGLL-IRGWAPQ--VV 352 (484)
Q Consensus 281 ~V~vs~GS~~~~~~~~~~~~~~al~---~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~--~~~nv~-~~~~~pq--~~ 352 (484)
.+++..|+.... +.+..+++|++ +.+.+++++..+.. . .-+.+.... .+.++. +.++... ..
T Consensus 292 ~~i~~vGrl~~~--Kg~~~li~a~~~l~~~~~~l~ivG~g~~---~-----~~~~l~~~~~~~~~~v~~~~g~~~~~~~~ 361 (485)
T 1rzu_A 292 PLFCVISRLTWQ--KGIDLMAEAVDEIVSLGGRLVVLGAGDV---A-----LEGALLAAASRHHGRVGVAIGYNEPLSHL 361 (485)
T ss_dssp CEEEEESCBSTT--TTHHHHHTTHHHHHHTTCEEEEEECBCH---H-----HHHHHHHHHHHTTTTEEEEESCCHHHHHH
T ss_pred eEEEEEccCccc--cCHHHHHHHHHHHHhcCceEEEEeCCch---H-----HHHHHHHHHHhCCCcEEEecCCCHHHHHH
Confidence 366777887642 23333444443 34666665543321 0 111222211 136786 6777332 25
Q ss_pred hcCCCCccccccc----cchhhHHHHHHcCCCEeccccccchhhHHHHHHHHh---------cceeEeccCCCCCCcccc
Q 011490 353 ILSHPAIGGFLTH----CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVL---------RIGVTIGAERPPSLADEE 419 (484)
Q Consensus 353 ll~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~---------G~g~~l~~~~~~~~~~~~ 419 (484)
++..+++ +|.- |--++++||+++|+|+|+... ..+...+ +.- +.|..++..
T Consensus 362 ~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~~--------- 425 (485)
T 1rzu_A 362 MQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQFSPV--------- 425 (485)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEESSC---------
T ss_pred HHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEeCCC---------
Confidence 7888998 7743 334689999999999999754 3344444 233 577777544
Q ss_pred cCCCccCHHHHHHHHHHHh---cCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHh
Q 011490 420 RNGVPVKKEDVKKAINMLM---DEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQ 481 (484)
Q Consensus 420 ~~~~~~~~~~l~~ai~~vl---~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~ 481 (484)
+.++|.++|.+++ +|++..+.+.++++ ++.-+-...++++.+...+
T Consensus 426 ------d~~~la~~i~~ll~~~~~~~~~~~~~~~~~----------~~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 426 ------TLDGLKQAIRRTVRYYHDPKLWTQMQKLGM----------KSDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp ------SHHHHHHHHHHHHHHHTCHHHHHHHHHHHH----------TCCCBHHHHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHHHHHhCCHHHHHHHHHHHH----------HHhCChHHHHHHHHHHHHH
Confidence 7899999999999 67644444443332 1344444555555554443
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.68 E-value=3e-06 Score=85.74 Aligned_cols=159 Identities=12% Similarity=-0.021 Sum_probs=91.0
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHh---CCCCEEEEEeCCCCCCCchhhhhhhHHHHHhc--CCCeE-eeCcCCh--hh
Q 011490 281 AVYVCLGSLCDSSTRQLIELGLGLEA---TKKPFIWVIRPGDQAKGLEDWLLAEKFEERIE--GRGLL-IRGWAPQ--VV 352 (484)
Q Consensus 281 ~V~vs~GS~~~~~~~~~~~~~~al~~---~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~--~~nv~-~~~~~pq--~~ 352 (484)
.+++..|.... .+.+..+++|++. .+.+++++..+... .-+.+..... ..++. +.++... ..
T Consensus 293 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~--------~~~~l~~~~~~~~~~v~~~~g~~~~~~~~ 362 (485)
T 2qzs_A 293 PLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLALLGAGDPV--------LQEGFLAAAAEYPGQVGVQIGYHEAFSHR 362 (485)
T ss_dssp CEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEEEEEECHH--------HHHHHHHHHHHSTTTEEEEESCCHHHHHH
T ss_pred eEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEEEeCCchH--------HHHHHHHHHHhCCCcEEEeCCCCHHHHHH
Confidence 45556676543 2334445555543 36666655443210 1112222111 36775 7778332 35
Q ss_pred hcCCCCccccccc----cchhhHHHHHHcCCCEeccccccchhhHHHHHHHHh---------cceeEeccCCCCCCcccc
Q 011490 353 ILSHPAIGGFLTH----CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVL---------RIGVTIGAERPPSLADEE 419 (484)
Q Consensus 353 ll~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~---------G~g~~l~~~~~~~~~~~~ 419 (484)
++..+++ +|.- |.-++++||+++|+|+|+... ..+...+ +.- +.|..++..
T Consensus 363 ~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~~--------- 426 (485)
T 2qzs_A 363 IMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVFEDS--------- 426 (485)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEECSS---------
T ss_pred HHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEECCC---------
Confidence 7888998 7743 334678899999999999754 3344444 233 577777644
Q ss_pred cCCCccCHHHHHHHHHHHh---cCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHh
Q 011490 420 RNGVPVKKEDVKKAINMLM---DEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQ 481 (484)
Q Consensus 420 ~~~~~~~~~~l~~ai~~vl---~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~ 481 (484)
+.++|+++|.+++ +|++..+.+.++++ .+.-|-...++++.+.+.+
T Consensus 427 ------d~~~la~~i~~ll~~~~~~~~~~~~~~~~~----------~~~fs~~~~~~~~~~ly~~ 475 (485)
T 2qzs_A 427 ------NAWSLLRAIRRAFVLWSRPSLWRFVQRQAM----------AMDFSWQVAAKSYRELYYR 475 (485)
T ss_dssp ------SHHHHHHHHHHHHHHHTSHHHHHHHHHHHH----------HCCCCHHHHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHH----------hhcCCHHHHHHHHHHHHHH
Confidence 7899999999999 67644444443332 1344545555555555443
No 43
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.67 E-value=3.6e-05 Score=79.39 Aligned_cols=97 Identities=14% Similarity=0.090 Sum_probs=67.8
Q ss_pred CCeEeeCcCCh---hhhcCCCCcccccc---ccchhhHHHHHHcCCCEeccccccchhhH-HHHHHHHhcceeEeccCCC
Q 011490 340 RGLLIRGWAPQ---VVILSHPAIGGFLT---HCGWNSVLEAVSNGLPMVTWPFFADQFCN-EKLVVQVLRIGVTIGAERP 412 (484)
Q Consensus 340 ~nv~~~~~~pq---~~ll~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~DQ~~n-a~~~~e~~G~g~~l~~~~~ 412 (484)
++|.+.+++|+ ..++..+++ ||. .|+-+++.||+++|+|+|++|...-.... +..+ +..|+...+ .
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v--~-- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMN--V-- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGB--C--
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhh--c--
Confidence 68999999984 456888888 762 25667899999999999998753211122 3444 466666544 2
Q ss_pred CCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHH
Q 011490 413 PSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYG 455 (484)
Q Consensus 413 ~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~ 455 (484)
-+.+++.+++.++++|++..+.+++++++..
T Consensus 507 ------------~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 537 (568)
T 2vsy_A 507 ------------ADDAAFVAKAVALASDPAALTALHARVDVLR 537 (568)
T ss_dssp ------------SSHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred ------------CCHHHHHHHHHHHhcCHHHHHHHHHHHHHhh
Confidence 2789999999999998855555555555443
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.62 E-value=2.8e-06 Score=83.98 Aligned_cols=167 Identities=9% Similarity=0.060 Sum_probs=93.2
Q ss_pred cEEEEecCCCccCCHHHHHHHHHHHHh-----CCCCEEEEEeCCCCC-CCchhhhhhhHHHHHhcCCC--------eEee
Q 011490 280 SAVYVCLGSLCDSSTRQLIELGLGLEA-----TKKPFIWVIRPGDQA-KGLEDWLLAEKFEERIEGRG--------LLIR 345 (484)
Q Consensus 280 ~~V~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~-~~~~~~~l~~~~~~~~~~~n--------v~~~ 345 (484)
..+++..|+... .+.+..+++|++. .+.+++++..+.... ..+.+. + ..+.....-.+ +.+.
T Consensus 184 ~~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~-~-~~~~~~~~l~~~v~~l~~vv~~~ 259 (413)
T 3oy2_A 184 DVLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSI-A-LRELVASGVDNVFTHLNKIMINR 259 (413)
T ss_dssp SEEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHH-H-HHHHHHHTCSCHHHHHTTEEEEC
T ss_pred ceEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHH-H-HHHHHHcCcccccccccceeecc
Confidence 367778888543 2334445555443 356777665543211 001110 1 11112223333 7778
Q ss_pred CcCCh---hhhcCCCCcccccc----ccchhhHHHHHHcCCCEeccccccchhhHHHHHHHHhcc---------------
Q 011490 346 GWAPQ---VVILSHPAIGGFLT----HCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRI--------------- 403 (484)
Q Consensus 346 ~~~pq---~~ll~~~~~~~~I~----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~--------------- 403 (484)
+|+|+ ..++..+++ +|. -|.-.++.||+++|+|+|+... ..+...+ +. |.
T Consensus 260 g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~-~~~~~i~~~~~~~~~~~ 331 (413)
T 3oy2_A 260 TVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYF-SG-DCVYKIKPSAWISVDDR 331 (413)
T ss_dssp SCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHS-CT-TTSEEECCCEEEECTTT
T ss_pred CcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHH-cc-Ccccccccccccccccc
Confidence 99984 447888888 764 2334589999999999999654 3333333 12 22
Q ss_pred -ee--EeccCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHH
Q 011490 404 -GV--TIGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDIL 480 (484)
Q Consensus 404 -g~--~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 480 (484)
|. .++. -+.+++.++| ++++|++..+.+.+++++.. .+.-+-...++++.+.+.
T Consensus 332 ~G~~gl~~~---------------~d~~~la~~i-~l~~~~~~~~~~~~~a~~~~-------~~~fs~~~~~~~~~~~~~ 388 (413)
T 3oy2_A 332 DGIGGIEGI---------------IDVDDLVEAF-TFFKDEKNRKEYGKRVQDFV-------KTKPTWDDISSDIIDFFN 388 (413)
T ss_dssp CSSCCEEEE---------------CCHHHHHHHH-HHTTSHHHHHHHHHHHHHHH-------TTSCCHHHHHHHHHHHHH
T ss_pred cCcceeeCC---------------CCHHHHHHHH-HHhcCHHHHHHHHHHHHHHH-------HHhCCHHHHHHHHHHHHH
Confidence 33 4432 3899999999 99998754444444444433 223344455555555544
Q ss_pred h
Q 011490 481 Q 481 (484)
Q Consensus 481 ~ 481 (484)
+
T Consensus 389 ~ 389 (413)
T 3oy2_A 389 S 389 (413)
T ss_dssp H
T ss_pred H
Confidence 3
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.57 E-value=4.2e-07 Score=78.65 Aligned_cols=139 Identities=12% Similarity=0.101 Sum_probs=91.8
Q ss_pred EEEecCCCccCCHHHHHHHHHHHHhC-CCCEEEEEeCCCCCCCchhhhhhhHHH--HHhcCCCeEeeCcCCh---hhhcC
Q 011490 282 VYVCLGSLCDSSTRQLIELGLGLEAT-KKPFIWVIRPGDQAKGLEDWLLAEKFE--ERIEGRGLLIRGWAPQ---VVILS 355 (484)
Q Consensus 282 V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~--~~~~~~nv~~~~~~pq---~~ll~ 355 (484)
+++..|+... .+.+..++++++.. +.+++++. .+.....+.+ ... .....+|+.+.+|+++ ..++.
T Consensus 25 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G-~~~~~~~l~~-----~~~~~~~~l~~~v~~~g~~~~~e~~~~~~ 96 (177)
T 2f9f_A 25 FWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVG-WFSKGDHAER-----YARKIMKIAPDNVKFLGSVSEEELIDLYS 96 (177)
T ss_dssp CEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEB-CCCTTSTHHH-----HHHHHHHHSCTTEEEEESCCHHHHHHHHH
T ss_pred EEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEe-cCccHHHHHH-----HHHhhhcccCCcEEEeCCCCHHHHHHHHH
Confidence 4556677653 34566778888876 56666554 3332222222 121 1223569999999997 56888
Q ss_pred CCCcccccc---ccch-hhHHHHHHcCCCEeccccccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHH
Q 011490 356 HPAIGGFLT---HCGW-NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVK 431 (484)
Q Consensus 356 ~~~~~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~ 431 (484)
.+++ +|. +.|+ .+++||+++|+|+|+... ..+...+ +..+.|..+ . -+.+++.
T Consensus 97 ~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~-~---------------~d~~~l~ 153 (177)
T 2f9f_A 97 RCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV-N---------------ADVNEII 153 (177)
T ss_dssp HCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE-C---------------SCHHHHH
T ss_pred hCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe-C---------------CCHHHHH
Confidence 9998 775 3344 489999999999999753 4555555 455678777 3 4889999
Q ss_pred HHHHHHhcCChh-HHHHHHHH
Q 011490 432 KAINMLMDEGEE-RDERRRRA 451 (484)
Q Consensus 432 ~ai~~vl~~~~~-~~~~r~~a 451 (484)
++|.++++|++. ++..+++|
T Consensus 154 ~~i~~l~~~~~~~~~~~~~~a 174 (177)
T 2f9f_A 154 DAMKKVSKNPDKFKKDCFRRA 174 (177)
T ss_dssp HHHHHHHHCTTTTHHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHH
Confidence 999999988853 33333333
No 46
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.53 E-value=1.3e-05 Score=78.11 Aligned_cols=98 Identities=11% Similarity=0.169 Sum_probs=73.3
Q ss_pred CeEeeCcCCh-hhhcCCCCccccccc-----cchhhHHHHHHcCCCEeccccccchhhHHHHHHHHhcceeEeccCCCCC
Q 011490 341 GLLIRGWAPQ-VVILSHPAIGGFLTH-----CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPS 414 (484)
Q Consensus 341 nv~~~~~~pq-~~ll~~~~~~~~I~H-----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~ 414 (484)
++.+.++... ..++..+++ ++.- +|..+++||+++|+|+|+-|...+.+.....+ ...|.++.. .
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~-~~~G~l~~~--~---- 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL-EKEGAGFEV--K---- 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH-HHTTCEEEC--C----
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH-HHCCCEEEe--C----
Confidence 4556565443 558888887 6542 23478999999999999888777777766665 356766544 3
Q ss_pred CcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHH
Q 011490 415 LADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAK 459 (484)
Q Consensus 415 ~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~ 459 (484)
++++|.++|.++++| +..+.+.+++++..+.-.
T Consensus 332 -----------d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 332 -----------NETELVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp -----------SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred -----------CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 678999999999998 888889999988877654
No 47
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.20 E-value=0.00016 Score=71.21 Aligned_cols=76 Identities=14% Similarity=0.068 Sum_probs=58.7
Q ss_pred CCCeEeeCcCChh---hhcCCCCcccccc---ccc-hhhHHHHH-------HcCCCEeccccccchhhHHHHHHHHhcce
Q 011490 339 GRGLLIRGWAPQV---VILSHPAIGGFLT---HCG-WNSVLEAV-------SNGLPMVTWPFFADQFCNEKLVVQVLRIG 404 (484)
Q Consensus 339 ~~nv~~~~~~pq~---~ll~~~~~~~~I~---HgG-~~s~~eal-------~~GvP~l~~P~~~DQ~~na~~~~e~~G~g 404 (484)
.+||.+.+++|+. .++..+++ +|. +-| -+++.||+ ++|+|+|+... + +.-..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcce
Confidence 5689999999864 47888998 664 233 35788999 99999999865 5 354567
Q ss_pred eE-eccCCCCCCcccccCCCccCHHHHHHHHHHHhcCCh
Q 011490 405 VT-IGAERPPSLADEERNGVPVKKEDVKKAINMLMDEGE 442 (484)
Q Consensus 405 ~~-l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 442 (484)
.. ++.. +.++|+++|.++++|++
T Consensus 331 ~l~v~~~---------------d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 331 RFGYTPG---------------NADSVIAAITQALEAPR 354 (406)
T ss_dssp EEEECTT---------------CHHHHHHHHHHHHHCCC
T ss_pred EEEeCCC---------------CHHHHHHHHHHHHhCcc
Confidence 76 6544 78999999999999873
No 48
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.92 E-value=8.4e-05 Score=62.98 Aligned_cols=146 Identities=13% Similarity=0.202 Sum_probs=88.5
Q ss_pred cEEEEecCCCccCCHHHHHHHHHHHHhCC--CCE-EEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChh---hh
Q 011490 280 SAVYVCLGSLCDSSTRQLIELGLGLEATK--KPF-IWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQV---VI 353 (484)
Q Consensus 280 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~--~~~-i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~---~l 353 (484)
+++++..|+... .+.+..+++++.... ..+ ++.+|.+... .. +- ....+. ..++.+ +|+|+. .+
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~---~~--~~-~~~~~~-~~~v~~-g~~~~~~~~~~ 71 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGPDE---KK--IK-LLAQKL-GVKAEF-GFVNSNELLEI 71 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCSTTH---HH--HH-HHHHHH-TCEEEC-CCCCHHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCccH---HH--HH-HHHHHc-CCeEEE-eecCHHHHHHH
Confidence 367778888753 345666777777653 122 3334433211 11 11 111222 237888 999864 47
Q ss_pred cCCCCccccccc----cchhhHHHHHHcCC-CEeccccccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHH
Q 011490 354 LSHPAIGGFLTH----CGWNSVLEAVSNGL-PMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKE 428 (484)
Q Consensus 354 l~~~~~~~~I~H----gG~~s~~eal~~Gv-P~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~ 428 (484)
+..+++ +|.- |.-.++.||+++|+ |+|+....+. ....+ +..+. .++. -+.+
T Consensus 72 ~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~-~~~~~--~~~~---------------~~~~ 128 (166)
T 3qhp_A 72 LKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFA-LDERS--LFEP---------------NNAK 128 (166)
T ss_dssp HTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGC-SSGGG--EECT---------------TCHH
T ss_pred HHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhc-cCCce--EEcC---------------CCHH
Confidence 888988 7752 33468999999996 9999432221 11122 22222 3332 4899
Q ss_pred HHHHHHHHHhcCChhHHHHHHHHHHHHHHH
Q 011490 429 DVKKAINMLMDEGEERDERRRRAREYGETA 458 (484)
Q Consensus 429 ~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~ 458 (484)
++.++|.++++|++..+.+.+++++..+.+
T Consensus 129 ~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 158 (166)
T 3qhp_A 129 DLSAKIDWWLENKLERERMQNEYAKSALNY 158 (166)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHC
Confidence 999999999999877777777777766443
No 49
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.68 E-value=0.00047 Score=70.15 Aligned_cols=153 Identities=16% Similarity=0.076 Sum_probs=96.9
Q ss_pred cEEEEecCCCccCCHHHHHHHHHHHHhCCCCEEEE--EeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhh---hc
Q 011490 280 SAVYVCLGSLCDSSTRQLIELGLGLEATKKPFIWV--IRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVV---IL 354 (484)
Q Consensus 280 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~--~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~---ll 354 (484)
.++|.+|++.....++.+....+.+++.+..++|. .+..... ... +-..+...--.+.+++.+.+|+.+ .+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~--~~~--~~~~~~~~GI~~Rv~F~g~~p~~e~la~y 516 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGI--THP--YVERFIKSYLGDSATAHPHSPYHQYLRIL 516 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGG--GHH--HHHHHHHHHHGGGEEEECCCCHHHHHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchh--hHH--HHHHHHHcCCCccEEEcCCCCHHHHHHHH
Confidence 58999999988888888888888888887777764 3322110 111 112222211235788889998654 45
Q ss_pred CCCCcccccc---ccchhhHHHHHHcCCCEeccccccch-hhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHH
Q 011490 355 SHPAIGGFLT---HCGWNSVLEAVSNGLPMVTWPFFADQ-FCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDV 430 (484)
Q Consensus 355 ~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~DQ-~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l 430 (484)
..+++ ++. .+|.+|++|||++|||+|+.+-..=. ..-+..+ ...|+...+- .-+.++.
T Consensus 517 ~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL-~~~GLpE~LI---------------A~d~eeY 578 (631)
T 3q3e_A 517 HNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLF-KRLGLPEWLI---------------ANTVDEY 578 (631)
T ss_dssp HTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHH-HHTTCCGGGE---------------ESSHHHH
T ss_pred hcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHH-HhcCCCccee---------------cCCHHHH
Confidence 78887 543 37789999999999999998754311 1122223 2455543211 1367777
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHH
Q 011490 431 KKAINMLMDEGEERDERRRRAREY 454 (484)
Q Consensus 431 ~~ai~~vl~~~~~~~~~r~~a~~l 454 (484)
.+...++.+|++....+|+++++-
T Consensus 579 v~~Av~La~D~~~l~~LR~~Lr~~ 602 (631)
T 3q3e_A 579 VERAVRLAENHQERLELRRYIIEN 602 (631)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHH
Confidence 777778888886655665555443
No 50
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=97.60 E-value=0.031 Score=56.82 Aligned_cols=137 Identities=9% Similarity=0.034 Sum_probs=73.9
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHH---hCCCCEEEEEeCCCCCCCchhhhhhhHHH--HHhcCCCeEeeCcCChh---h
Q 011490 281 AVYVCLGSLCDSSTRQLIELGLGLE---ATKKPFIWVIRPGDQAKGLEDWLLAEKFE--ERIEGRGLLIRGWAPQV---V 352 (484)
Q Consensus 281 ~V~vs~GS~~~~~~~~~~~~~~al~---~~~~~~i~~~~~~~~~~~~~~~~l~~~~~--~~~~~~nv~~~~~~pq~---~ 352 (484)
.+++..|.... .+.+..+++|+. +.+.++++...+... ....+. ....+.++.+..+.+.. .
T Consensus 328 p~i~~vgRl~~--~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 397 (536)
T 3vue_A 328 PLIAFIGRLEE--QKGPDVMAAAIPELMQEDVQIVLLGTGKKK--------FEKLLKSMEEKYPGKVRAVVKFNAPLAHL 397 (536)
T ss_dssp CEEEEECCBSG--GGCHHHHHHHHHHHTTSSCEEEEECCBCHH--------HHHHHHHHHHHSTTTEEEECSCCHHHHHH
T ss_pred cEEEEEeeccc--cCChHHHHHHHHHhHhhCCeEEEEeccCch--------HHHHHHHHHhhcCCceEEEEeccHHHHHH
Confidence 35556676653 334555555555 345666555433211 111111 12235678877777753 3
Q ss_pred hcCCCCcccccccc---ch-hhHHHHHHcCCCEeccccccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHH
Q 011490 353 ILSHPAIGGFLTHC---GW-NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKE 428 (484)
Q Consensus 353 ll~~~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~ 428 (484)
++..+++ ||.-. |. .+++||+++|+|.|+.... .....| ++-.-|........ .+..-...+.+
T Consensus 398 ~~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V-~dg~~G~~~~~~~~-----~g~l~~~~d~~ 465 (536)
T 3vue_A 398 IMAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTV-IEGKTGFHMGRLSV-----DCKVVEPSDVK 465 (536)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHC-CBTTTEEECCCCCS-----CTTCCCHHHHH
T ss_pred HHHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCCC----Cchhee-eCCCCccccccCCC-----ceeEECCCCHH
Confidence 6778888 77532 33 4889999999999987543 334344 23333443322100 00000023578
Q ss_pred HHHHHHHHHhc
Q 011490 429 DVKKAINMLMD 439 (484)
Q Consensus 429 ~l~~ai~~vl~ 439 (484)
.|.++|+++++
T Consensus 466 ~la~ai~ral~ 476 (536)
T 3vue_A 466 KVAATLKRAIK 476 (536)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 89999988775
No 51
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.50 E-value=0.001 Score=57.97 Aligned_cols=93 Identities=10% Similarity=0.082 Sum_probs=67.4
Q ss_pred CeEe-eCcCCh---hhhcCCCCcccccccc---c-hhhHHHHHHcCCCEeccccccchhhHHHHHHHHhcceeEeccCCC
Q 011490 341 GLLI-RGWAPQ---VVILSHPAIGGFLTHC---G-WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERP 412 (484)
Q Consensus 341 nv~~-~~~~pq---~~ll~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~ 412 (484)
++.+ .+++++ ..++..+++ +|... | -.+++||+++|+|+|+.... .+...+ ..+.|..++..
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~--~~~~g~~~~~~-- 165 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII--TNETGILVKAG-- 165 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC--CTTTCEEECTT--
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc--CCCceEEecCC--
Confidence 8999 999984 458889998 77433 2 46789999999999987543 222222 23567666543
Q ss_pred CCCcccccCCCccCHHHHHHHHHHHhc-CChhHHHHHHHHHHHHH
Q 011490 413 PSLADEERNGVPVKKEDVKKAINMLMD-EGEERDERRRRAREYGE 456 (484)
Q Consensus 413 ~~~~~~~~~~~~~~~~~l~~ai~~vl~-~~~~~~~~r~~a~~l~~ 456 (484)
+.+++.++|.++++ |++..+.+.+++++..+
T Consensus 166 -------------~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 166 -------------DPGELANAILKALELSRSDLSKFRENCKKRAM 197 (200)
T ss_dssp -------------CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred -------------CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 78999999999999 98666666666665544
No 52
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.40 E-value=0.0025 Score=67.33 Aligned_cols=151 Identities=15% Similarity=0.151 Sum_probs=98.5
Q ss_pred CCcEEEEecCCCccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHH-HhcCCCeEeeCcCChhh---h
Q 011490 278 PGSAVYVCLGSLCDSSTRQLIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEE-RIEGRGLLIRGWAPQVV---I 353 (484)
Q Consensus 278 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~-~~~~~nv~~~~~~pq~~---l 353 (484)
++.+||.||.+....+++.+..-.+-|++.+.-++|........ -.. +-..+.. -...+.+++.+..|..+ .
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~--~~~--l~~~~~~~gi~~~r~~f~~~~~~~~~l~~ 596 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG--EPN--IQQYAQNMGLPQNRIIFSPVAPKEEHVRR 596 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG--HHH--HHHHHHHTTCCGGGEEEEECCCHHHHHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH--HHH--HHHHHHhcCCCcCeEEECCCCCHHHHHHH
Confidence 44599999999999999999999999999998899988764321 011 2221211 11245688888888544 5
Q ss_pred cCCCCcccccc---ccchhhHHHHHHcCCCEecccccc-chhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHH
Q 011490 354 LSHPAIGGFLT---HCGWNSVLEAVSNGLPMVTWPFFA-DQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKED 429 (484)
Q Consensus 354 l~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~-DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~ 429 (484)
+..+++ +.. .+|.+|++|||..|||+|++|-.. =...-+..+ ...|+...+- -+.++
T Consensus 597 ~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l-~~~gl~e~ia----------------~~~~~ 657 (723)
T 4gyw_A 597 GQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQL-TCLGCLELIA----------------KNRQE 657 (723)
T ss_dssp GGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHH-HHHTCGGGBC----------------SSHHH
T ss_pred hCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHH-HHcCCccccc----------------CCHHH
Confidence 566776 654 788999999999999999999532 122334455 4677765442 34444
Q ss_pred HHHHHHHHhcCChhHHHHHHHH
Q 011490 430 VKKAINMLMDEGEERDERRRRA 451 (484)
Q Consensus 430 l~~ai~~vl~~~~~~~~~r~~a 451 (484)
-.+..-++-+|+++...+|++.
T Consensus 658 Y~~~a~~la~d~~~l~~lr~~l 679 (723)
T 4gyw_A 658 YEDIAVKLGTDLEYLKKVRGKV 679 (723)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHH
Confidence 4444445666775444444433
No 53
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.32 E-value=0.0044 Score=59.31 Aligned_cols=103 Identities=10% Similarity=0.055 Sum_probs=65.6
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHC--CCeEEEEeCCCchhhhhHHHhhcccCCCce-EEEEeeCCCccCCCCCCCCc
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQH--GALVTIVTTPMNAARFQNVIERGIQSGLRI-QVIEFYFPCQEVGLPEGCES 85 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~r--Gh~V~~~~~~~~~~~v~~~~~~~~~~~~~i-~~~~i~~~~~~~~~~~~~~~ 85 (484)
+||+++...+.|++.=...+.++|+++ +.+|++++.+.+.+.++.. +.+ +++.++. ..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~--------p~i~~v~~~~~-------~~---- 61 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM--------PEVNEAIPMPL-------GH---- 61 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC--------TTEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CccCEEEEecC-------Cc----
Confidence 589999998889999999999999997 9999999988555433322 234 3433220 00
Q ss_pred cCCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCCcchHHHHHHcCCCcEE
Q 011490 86 WDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCLPWTVSSACKFNVPRIV 145 (484)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~v~ 145 (484)
. . ..+.. ...+...+++ .++|++|.-....-...++...|+|...
T Consensus 62 ---~-~-~~~~~--------~~~l~~~l~~--~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 62 ---G-A-LEIGE--------RRKLGHSLRE--KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp --------CHHH--------HHHHHHHTTT--TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ---c-c-cchHH--------HHHHHHHHHh--cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 0 0 00111 1123344555 7899999433444566778888999754
No 54
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.28 E-value=0.003 Score=60.59 Aligned_cols=104 Identities=13% Similarity=0.017 Sum_probs=69.8
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHC--CCeEEEEeCCCchhhhhHHHhhcccCCCceE-EEEeeCCCccCCCCCCCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQH--GALVTIVTTPMNAARFQNVIERGIQSGLRIQ-VIEFYFPCQEVGLPEGCE 84 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~r--Gh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~-~~~i~~~~~~~~~~~~~~ 84 (484)
.+||+++-..+.|++.-+.++.+.|+++ +.+|++++.+.+.+.++.. +.++ ++.++. .
T Consensus 8 ~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~---------~-- 68 (349)
T 3tov_A 8 YKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN--------PNIDELIVVDK---------K-- 68 (349)
T ss_dssp TCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC--------TTCSEEEEECC---------S--
T ss_pred CCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CCccEEEEeCc---------c--
Confidence 5699999999999999999999999998 9999999998665544432 2343 433320 0
Q ss_pred ccCCCCccchHHHHHHHHHHchHHHHHHHHhcCCCC-eEEEecCCCcchHHHHHHcCCCcEE
Q 011490 85 SWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKP-SCLISDVCLPWTVSSACKFNVPRIV 145 (484)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-D~vI~D~~~~~a~~~A~~lgIP~v~ 145 (484)
.....+. ... .+...+++ .++ |++|.-....-...++...|+|..+
T Consensus 69 --------~~~~~~~----~~~-~l~~~Lr~--~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 --------GRHNSIS----GLN-EVAREINA--KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp --------SHHHHHH----HHH-HHHHHHHH--HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred --------cccccHH----HHH-HHHHHHhh--CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 0001111 111 22333444 589 9999766665566788889999765
No 55
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.89 E-value=0.0025 Score=60.77 Aligned_cols=111 Identities=12% Similarity=0.142 Sum_probs=79.2
Q ss_pred CeEeeCcCChhhh---cCCCCccccccccch---------hhHHHHHHcCCCEeccccccchhhHHHHHHHHhcceeEec
Q 011490 341 GLLIRGWAPQVVI---LSHPAIGGFLTHCGW---------NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIG 408 (484)
Q Consensus 341 nv~~~~~~pq~~l---l~~~~~~~~I~HgG~---------~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~ 408 (484)
||...+|+|+.++ |..++++++..-+.. +-+.|++++|+|+|+.+ ...++..+ ++.|+|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEeC
Confidence 9999999998665 445566445433322 34789999999999854 45677778 6899999883
Q ss_pred cCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 011490 409 AERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDI 479 (484)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 479 (484)
+.+++.+++..+. +++.+++++|+++.+++++ .|-....++.+.+.++
T Consensus 290 -----------------~~~e~~~~i~~l~--~~~~~~m~~na~~~a~~~~----~~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 -----------------DVEEAIMKVKNVN--EDEYIELVKNVRSFNPILR----KGFFTRRLLTESVFQA 337 (339)
T ss_dssp -----------------SHHHHHHHHHHCC--HHHHHHHHHHHHHHTHHHH----TTHHHHHHHHHHHHHH
T ss_pred -----------------CHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHh
Confidence 3578888888764 4567889999999988866 3445555555555443
No 56
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=94.97 E-value=2.2 Score=39.79 Aligned_cols=45 Identities=11% Similarity=0.012 Sum_probs=39.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHC--CCeEEEEeCCCchhhhhH
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQH--GALVTIVTTPMNAARFQN 53 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~r--Gh~V~~~~~~~~~~~v~~ 53 (484)
+||+++-..+.|++.=..++.++|+++ +.+|++++.+.+.+.++.
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 47 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSW 47 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHT
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhc
Confidence 489999999999999999999999998 999999999866554433
No 57
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=94.83 E-value=0.079 Score=51.89 Aligned_cols=81 Identities=19% Similarity=0.087 Sum_probs=57.4
Q ss_pred CCCeEeeCcCChh---hhcCCCCcccccccc---ch-hhHHHHHHcCCCEeccccccchhhHHHHHHHHhcceeEeccCC
Q 011490 339 GRGLLIRGWAPQV---VILSHPAIGGFLTHC---GW-NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAER 411 (484)
Q Consensus 339 ~~nv~~~~~~pq~---~ll~~~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~ 411 (484)
..++.+.+++|+. .++..+++ ||.-. |. ++++||+++|+|+|+- ..+ ....+ +.-..|+.++..
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g----~~e~v-~~~~~G~lv~~~- 364 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVITN-KYE----NKDLS-NWHSNIVSLEQL- 364 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEEE-CBT----TBCGG-GTBTTEEEESSC-
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEEe-CCC----cchhh-hcCCCEEEeCCC-
Confidence 3478899999864 47888888 76422 33 4679999999999982 222 11233 343467777654
Q ss_pred CCCCcccccCCCccCHHHHHHHHHHHhcCCh
Q 011490 412 PPSLADEERNGVPVKKEDVKKAINMLMDEGE 442 (484)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 442 (484)
++++|+++|.++++|++
T Consensus 365 --------------d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 365 --------------NPENIAETLVELCMSFN 381 (413)
T ss_dssp --------------SHHHHHHHHHHHHHHTC
T ss_pred --------------CHHHHHHHHHHHHcCHH
Confidence 78999999999999883
No 58
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=87.13 E-value=7.6 Score=33.16 Aligned_cols=37 Identities=22% Similarity=0.200 Sum_probs=33.8
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
+-.|++++.++-|-..-.+.+|.+.+.+|+.|.|+..
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF 64 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQF 64 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEe
Confidence 5679999999999999999999999999999999953
No 59
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=86.75 E-value=1.6 Score=44.99 Aligned_cols=44 Identities=11% Similarity=0.113 Sum_probs=31.4
Q ss_pred eEeeCcCCh---------hhhcCCCCcccccccc---ch-hhHHHHHHcCCCEeccccc
Q 011490 342 LLIRGWAPQ---------VVILSHPAIGGFLTHC---GW-NSVLEAVSNGLPMVTWPFF 387 (484)
Q Consensus 342 v~~~~~~pq---------~~ll~~~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~ 387 (484)
+++-.|++. ..++..+++ ||.-. |+ .+.+||+++|+|+|+.-..
T Consensus 495 If~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 495 IFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp EECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred EEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 344467765 347888888 77543 33 4889999999999996553
No 60
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=84.71 E-value=13 Score=36.81 Aligned_cols=109 Identities=12% Similarity=0.067 Sum_probs=68.4
Q ss_pred CeEeeCcCChh---hhcCCCCcccccc---ccchhh-HHHHHHcC---CCEeccccccchhhHHHHHHHHhc-ceeEecc
Q 011490 341 GLLIRGWAPQV---VILSHPAIGGFLT---HCGWNS-VLEAVSNG---LPMVTWPFFADQFCNEKLVVQVLR-IGVTIGA 409 (484)
Q Consensus 341 nv~~~~~~pq~---~ll~~~~~~~~I~---HgG~~s-~~eal~~G---vP~l~~P~~~DQ~~na~~~~e~~G-~g~~l~~ 409 (484)
.|+....+|+. .++..+++ ++. +=|+|. ..|++++| .|+|+--+.+ .+ +.+| -|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~----~~l~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AA----EVLGEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----TH----HHHGGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CH----HHhCCCEEEECC
Confidence 57777788863 46667887 553 458885 57999996 5555443322 22 2333 4778876
Q ss_pred CCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHh
Q 011490 410 ERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQ 481 (484)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~ 481 (484)
. +.++++++|.++|+++.+ +-+++.+++.+.++ .-....-.+.|++.+..
T Consensus 423 ~---------------D~~~lA~AI~~aL~m~~~--er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 423 F---------------DLVEQAEAISAALAAGPR--QRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAA 472 (496)
T ss_dssp T---------------BHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHH
T ss_pred C---------------CHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhh
Confidence 5 899999999999987632 22333334433333 34556667777777754
No 61
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=84.19 E-value=1.3 Score=38.39 Aligned_cols=45 Identities=13% Similarity=0.024 Sum_probs=38.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhH
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQN 53 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~ 53 (484)
++||++...|+.|-+. ...|.+.|+++|++|.++.++.....+..
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~ 48 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMAT 48 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHH
Confidence 5789999999998888 89999999999999999998865554444
No 62
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=81.79 E-value=0.61 Score=45.47 Aligned_cols=39 Identities=10% Similarity=0.048 Sum_probs=31.3
Q ss_pred CcEEEEEcCCCC-----CCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 011490 8 QLHFILFPFLAQ-----GHMIPMIDIARLLAQHGALVTIVTTPM 46 (484)
Q Consensus 8 ~~kil~~~~~~~-----GHv~P~l~La~~L~~rGh~V~~~~~~~ 46 (484)
++||++++.... |=......||++|+++||+|++++...
T Consensus 46 ~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 789999885522 334568999999999999999999753
No 63
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=80.62 E-value=3 Score=33.43 Aligned_cols=46 Identities=11% Similarity=0.022 Sum_probs=38.2
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhH
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQN 53 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~ 53 (484)
+.||++.+.+.-+|-....-++..|..+|++|.........+.+.+
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~ 48 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIK 48 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHH
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 5789999999999999999999999999999998876443333333
No 64
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=79.64 E-value=2.8 Score=34.66 Aligned_cols=47 Identities=15% Similarity=0.096 Sum_probs=39.1
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHH
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNV 54 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~ 54 (484)
+.||++.+.+..+|-....-++..|..+|++|.+.......+.+.+.
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~a 64 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMA 64 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHH
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 78999999999999999999999999999999998764433333333
No 65
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=76.93 E-value=2.5 Score=36.60 Aligned_cols=43 Identities=9% Similarity=0.041 Sum_probs=36.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhh
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQ 52 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~ 52 (484)
++||++...++.+-+. ...|.+.|+++| +|.++.++...+.+.
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~ 61 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLD 61 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCC
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcC
Confidence 5799999999998776 899999999999 999999886555443
No 66
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=75.61 E-value=5.3 Score=34.54 Aligned_cols=48 Identities=17% Similarity=0.124 Sum_probs=40.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHH
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVI 55 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~ 55 (484)
+.+|++.+.++..|-....-++..|..+|++|.+.....-.+.+....
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~ 135 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAV 135 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 568999999999999999999999999999999988755445444443
No 67
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=75.00 E-value=4.2 Score=36.32 Aligned_cols=112 Identities=13% Similarity=0.127 Sum_probs=59.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCCccCCC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESWDKL 89 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~ 89 (484)
|||+.-=-+. +---+..|+++|++.| +|+++.+.....-+...+ .-...+++..+.... ....+.
T Consensus 3 ~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~si----T~~~pl~~~~~~~~~--------~~~v~G- 67 (251)
T 2wqk_A 3 TFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL----TFTEPLKMRKIDTDF--------YTVIDG- 67 (251)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC----CCSSCEEEEEEETTE--------EEETTC-
T ss_pred EEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCc----CCCCCceeEEeeccc--------eeecCC-
Confidence 5666654333 3344678999999998 599998875544222111 111124444432110 000000
Q ss_pred CccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecC----------CC---cchHHHHHHcCCCcEEEec
Q 011490 90 PSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDV----------CL---PWTVSSACKFNVPRIVFHG 148 (484)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~----------~~---~~a~~~A~~lgIP~v~~~~ 148 (484)
.--..... .+..++.+ .+||+||+-. .+ .+|+.-|..+|||.+.++.
T Consensus 68 ---TPaDCV~l-------al~~~l~~--~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 68 ---TPADCVHL-------GYRVILEE--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp ---CHHHHHHH-------HHHTTTTT--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ---ChHHHHhh-------hhhhhcCC--CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 00111111 23344555 6899999832 22 4667778889999999864
No 68
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=74.78 E-value=12 Score=37.13 Aligned_cols=109 Identities=17% Similarity=0.148 Sum_probs=64.7
Q ss_pred eE-eeCcCChhh---hcCCCCcccccc---ccchh-hHHHHHHcCC-----CEeccccccchhhHHHHHHHHhcceeEec
Q 011490 342 LL-IRGWAPQVV---ILSHPAIGGFLT---HCGWN-SVLEAVSNGL-----PMVTWPFFADQFCNEKLVVQVLRIGVTIG 408 (484)
Q Consensus 342 v~-~~~~~pq~~---ll~~~~~~~~I~---HgG~~-s~~eal~~Gv-----P~l~~P~~~DQ~~na~~~~e~~G~g~~l~ 408 (484)
++ +.+++++.+ ++..+++ ||. .=|+| ++.||+++|+ |+|+--+.+- + +...-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~----~----~~l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA----A----NELTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG----G----GTCTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC----H----HHhCCeEEEC
Confidence 44 457888654 6778888 664 34665 7889999998 6665443321 1 1112366676
Q ss_pred cCCCCCCcccccCCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHhh
Q 011490 409 AERPPSLADEERNGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQQ 482 (484)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 482 (484)
+. +.++++++|.++++++++ .-+++.++..+.. .+ -+...-++++++.+.+.
T Consensus 403 p~---------------d~~~lA~ai~~lL~~~~~--~r~~~~~~~~~~v----~~-~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 PY---------------DRDEVAAALDRALTMSLA--ERISRHAEMLDVI----VK-NDINHWQECFISDLKQI 454 (482)
T ss_dssp TT---------------CHHHHHHHHHHHHTCCHH--HHHHHHHHHHHHH----HH-TCHHHHHHHHHHHHHHS
T ss_pred CC---------------CHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHH----Hh-CCHHHHHHHHHHHHHhc
Confidence 54 789999999999986521 1112222222222 22 34556667777766543
No 69
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=72.12 E-value=4 Score=34.23 Aligned_cols=43 Identities=5% Similarity=-0.045 Sum_probs=36.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhh
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQ 52 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~ 52 (484)
+||++...|+.|=+. ...|.+.|+++|++|.++.++...+.+.
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~ 48 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFIN 48 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSC
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhh
Confidence 489999988877665 8999999999999999999887665444
No 70
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=71.95 E-value=7.2 Score=35.01 Aligned_cols=44 Identities=16% Similarity=0.024 Sum_probs=37.6
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhh
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARF 51 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v 51 (484)
+.+|++.+.++..|-....-++..|..+|++|.+.+...-.+.+
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l 166 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEV 166 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHH
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 67999999999999999999999999999999988754333333
No 71
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=71.75 E-value=4.2 Score=34.79 Aligned_cols=45 Identities=11% Similarity=0.084 Sum_probs=37.3
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHC-CCeEEEEeCCCchhhhhHH
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQH-GALVTIVTTPMNAARFQNV 54 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~r-Gh~V~~~~~~~~~~~v~~~ 54 (484)
+||++...|+.|-+. ...|.+.|+++ |++|.++.++...+.+...
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~~ 46 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIELE 46 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHHH
Confidence 479999999987766 99999999999 9999999988766555533
No 72
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=71.39 E-value=26 Score=29.42 Aligned_cols=37 Identities=27% Similarity=0.333 Sum_probs=29.9
Q ss_pred EEEEEc--CCCCCCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 011490 10 HFILFP--FLAQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (484)
Q Consensus 10 kil~~~--~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~ 46 (484)
|++.+. -|+-|=..=...||..|+++|+.|.++-...
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~ 40 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDP 40 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 444444 3578999999999999999999999996543
No 73
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=71.24 E-value=41 Score=29.81 Aligned_cols=122 Identities=11% Similarity=0.048 Sum_probs=67.1
Q ss_pred CcEEEEEcCC--CCCCHHHHHHHHHHHHHCCCeEEEEeC------CC--chhhhhHHHhhcccCCCceEEEEeeCCCccC
Q 011490 8 QLHFILFPFL--AQGHMIPMIDIARLLAQHGALVTIVTT------PM--NAARFQNVIERGIQSGLRIQVIEFYFPCQEV 77 (484)
Q Consensus 8 ~~kil~~~~~--~~GHv~P~l~La~~L~~rGh~V~~~~~------~~--~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~ 77 (484)
.++.+|++.. .-|=..=.+.|++.|+++|++|.++=+ +. ....+++.. +.......+-
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~~------g~~~~~~~~~------ 92 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRLA------GVTQLAGLAR------ 92 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHHH------CCCEEEEEEE------
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHHc------CCCCCCCCee------
Confidence 5565555543 568999999999999999999999852 11 111122221 1111111111
Q ss_pred CCCCCCCccCCCCccchHHHHHHHH-HHchHHHHHHHHhcCCCCeEEEecCCC----------cchHHHHHHcCCCcEEE
Q 011490 78 GLPEGCESWDKLPSMALLPKFFAAI-EMLRLPLETLFKEIQPKPSCLISDVCL----------PWTVSSACKFNVPRIVF 146 (484)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~D~vI~D~~~----------~~a~~~A~~lgIP~v~~ 146 (484)
+... . . .......... ....+.+.+.+++...+.|+||++... .....+|+.++.|++.+
T Consensus 93 -~~~p------~-s-P~~aa~~~~~~~~~~~~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV 163 (251)
T 3fgn_A 93 -YPQP------M-A-PAAAAEHAGMALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVV 163 (251)
T ss_dssp -CSSS------S-C-HHHHHHHTTCCCCCHHHHHHHHHTTCCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEE
T ss_pred -ECCC------C-C-hHHHHHHcCCCCCCHHHHHHHHHHHHhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEE
Confidence 1000 0 0 0010000000 112345666666555789999998831 23467999999999987
Q ss_pred ecch
Q 011490 147 HGFS 150 (484)
Q Consensus 147 ~~~~ 150 (484)
....
T Consensus 164 ~~~~ 167 (251)
T 3fgn_A 164 VTAD 167 (251)
T ss_dssp ECSS
T ss_pred EcCC
Confidence 6554
No 74
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=70.79 E-value=2.1 Score=36.67 Aligned_cols=45 Identities=4% Similarity=-0.081 Sum_probs=36.8
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhH
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQN 53 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~ 53 (484)
.+||++...|+.|=+. ...|.+.|+++|++|.++.++...+.+..
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSCH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 5689999999887775 78999999999999999998865554433
No 75
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=69.89 E-value=5.1 Score=32.36 Aligned_cols=47 Identities=17% Similarity=0.045 Sum_probs=33.3
Q ss_pred CCCCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCch
Q 011490 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNA 48 (484)
Q Consensus 1 m~~~~~~~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~ 48 (484)
|+.++. +.-++++..+..-.+++.+.||...++.|++|+++.+...-
T Consensus 2 ~~~~m~-~kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv 48 (144)
T 2qs7_A 2 MAEEKK-KKLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGL 48 (144)
T ss_dssp -----C-CEEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHH
T ss_pred cccccc-CCEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHH
Confidence 444444 44555666667888999999999999999999999876433
No 76
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=69.44 E-value=4.3 Score=32.56 Aligned_cols=46 Identities=15% Similarity=0.052 Sum_probs=33.9
Q ss_pred CcEEEEE--cCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhH
Q 011490 8 QLHFILF--PFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQN 53 (484)
Q Consensus 8 ~~kil~~--~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~ 53 (484)
.+|++++ +.-..-.+--.+-|...|.++||+|++++++.....++-
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLlev 53 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQV 53 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheec
Confidence 4665544 223567777889999999999999999999965554443
No 77
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=69.01 E-value=10 Score=32.90 Aligned_cols=47 Identities=13% Similarity=-0.007 Sum_probs=39.8
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHH
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNV 54 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~ 54 (484)
+.||++.+.++..|-....-++..|..+|++|+......-.+.+.+.
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~ 138 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEE 138 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHH
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHH
Confidence 68999999999999999999999999999999999765444444333
No 78
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=68.46 E-value=57 Score=28.09 Aligned_cols=103 Identities=9% Similarity=0.005 Sum_probs=54.6
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCC--eEEEEe-CCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCCc
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGA--LVTIVT-TPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCES 85 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh--~V~~~~-~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~ 85 (484)
+||+|+.+++. .-+.++.++|.+.+| +|..+. .+......+.. .. .++.+..++. ..
T Consensus 2 ~rI~vl~SG~g---~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A-~~-----~gIp~~~~~~--------~~--- 61 (216)
T 2ywr_A 2 LKIGVLVSGRG---SNLQAIIDAIESGKVNASIELVISDNPKAYAIERC-KK-----HNVECKVIQR--------KE--- 61 (216)
T ss_dssp EEEEEEECSCC---HHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHH-HH-----HTCCEEECCG--------GG---
T ss_pred CEEEEEEeCCc---HHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHH-HH-----cCCCEEEeCc--------cc---
Confidence 47998877665 246777788888888 776554 33322222222 11 1455554321 00
Q ss_pred cCCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-cchHHHHHHcCCCcEEE
Q 011490 86 WDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCL-PWTVSSACKFNVPRIVF 146 (484)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~v~~ 146 (484)
... . ....+.+.+.+++ .++|++|+-.+. .-...+-....-.++-+
T Consensus 62 ---~~~-------r---~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~~~~~~iNi 108 (216)
T 2ywr_A 62 ---FPS-------K---KEFEERMALELKK--KGVELVVLAGFMRILSHNFLKYFPNKVINI 108 (216)
T ss_dssp ---SSS-------H---HHHHHHHHHHHHH--TTCCEEEESSCCSCCCHHHHTTSTTCEEEE
T ss_pred ---ccc-------h---hhhhHHHHHHHHh--cCCCEEEEeCchhhCCHHHHhhccCCeEEE
Confidence 000 0 1122345667777 899999987753 33334444444455554
No 79
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=68.25 E-value=48 Score=30.95 Aligned_cols=101 Identities=17% Similarity=0.104 Sum_probs=59.6
Q ss_pred cEEEEEcCCCCC--C--HHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCC
Q 011490 9 LHFILFPFLAQG--H--MIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCE 84 (484)
Q Consensus 9 ~kil~~~~~~~G--H--v~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~ 84 (484)
.-|++.|..+.. . ..-+..|++.|.++|++|.+++++...+..++...... -.... +..
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~~-----~~~~~---------l~g--- 248 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQME-----TKPIV---------ATG--- 248 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTCS-----SCCEE---------CTT---
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhcc-----cccEE---------eeC---
Confidence 346666554332 1 34689999999999999998777665554444422110 00000 000
Q ss_pred ccCCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCCcchHHHHHHcCCCcEEEecch
Q 011490 85 SWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCLPWTVSSACKFNVPRIVFHGFS 150 (484)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~v~~~~~~ 150 (484)
. . ...++..+++ ..|++|+.-. +...+|..+|+|+|.++...
T Consensus 249 ------~-~-----------sl~e~~ali~----~a~~~i~~Ds--G~~HlAaa~g~P~v~lfg~t 290 (349)
T 3tov_A 249 ------K-F-----------QLGPLAAAMN----RCNLLITNDS--GPMHVGISQGVPIVALYGPS 290 (349)
T ss_dssp ------C-C-----------CHHHHHHHHH----TCSEEEEESS--HHHHHHHTTTCCEEEECSSC
T ss_pred ------C-C-----------CHHHHHHHHH----hCCEEEECCC--CHHHHHHhcCCCEEEEECCC
Confidence 0 0 1123344554 5899997543 56778999999999976544
No 80
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=66.80 E-value=6 Score=34.63 Aligned_cols=152 Identities=14% Similarity=0.073 Sum_probs=75.9
Q ss_pred ccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChh
Q 011490 272 WLDSWQPGSAVYVCLGSLCDSSTRQLIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQV 351 (484)
Q Consensus 272 ~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~ 351 (484)
|++-.. ++++.|+.|.++ ...+..|.+.|..+.++.... .+.+.......++.+....-+.
T Consensus 26 fl~L~g-k~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~~-----------~~~l~~l~~~~~i~~i~~~~~~ 86 (223)
T 3dfz_A 26 MLDLKG-RSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPTV-----------SAEINEWEAKGQLRVKRKKVGE 86 (223)
T ss_dssp EECCTT-CCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSSC-----------CHHHHHHHHTTSCEEECSCCCG
T ss_pred EEEcCC-CEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCC-----------CHHHHHHHHcCCcEEEECCCCH
Confidence 444433 448888887544 445566667788877665321 1122222233445443333334
Q ss_pred hhcCCCCccccccccchhhHHHHHH----cCCCEeccccccchhhHHH-----HHHHHhcceeEeccCCCCCCcccccCC
Q 011490 352 VILSHPAIGGFLTHCGWNSVLEAVS----NGLPMVTWPFFADQFCNEK-----LVVQVLRIGVTIGAERPPSLADEERNG 422 (484)
Q Consensus 352 ~ll~~~~~~~~I~HgG~~s~~eal~----~GvP~l~~P~~~DQ~~na~-----~~~e~~G~g~~l~~~~~~~~~~~~~~~ 422 (484)
..|..+++ +|.--|.-.+.+.++ .|+|+-+ .|.+..+. .+ ++-++-+.+... +.
T Consensus 87 ~dL~~adL--VIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv-~rg~l~iaIST~----------G~ 149 (223)
T 3dfz_A 87 EDLLNVFF--IVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQF-SRGRLSLAISTD----------GA 149 (223)
T ss_dssp GGSSSCSE--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEE-EETTEEEEEECT----------TS
T ss_pred hHhCCCCE--EEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEE-EeCCEEEEEECC----------CC
Confidence 55667777 887777655544443 3444332 24433331 22 122233333322 11
Q ss_pred CccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHH
Q 011490 423 VPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTA 461 (484)
Q Consensus 423 ~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~ 461 (484)
...-+..|++.|...+. .....+-+.+.++++++++.
T Consensus 150 sP~la~~iR~~ie~~lp--~~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 150 SPLLTKRIKEDLSSNYD--ESYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp CHHHHHHHHHHHHHHSC--THHHHHHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHHHHHHcc--HHHHHHHHHHHHHHHHHHHH
Confidence 23445678888888773 33335556666676666643
No 81
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=65.92 E-value=20 Score=34.23 Aligned_cols=33 Identities=9% Similarity=0.101 Sum_probs=26.9
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
.+||+++..+.. .+.+++++++.|++|.++..+
T Consensus 7 ~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 7 NKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp CCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred CCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 678999887653 467999999999999999754
No 82
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=65.20 E-value=7.2 Score=33.48 Aligned_cols=40 Identities=18% Similarity=-0.040 Sum_probs=33.5
Q ss_pred CcEEEEEcCCCCCCHH-HHHHHHHHHHHCCCeEEEEeCCCch
Q 011490 8 QLHFILFPFLAQGHMI-PMIDIARLLAQHGALVTIVTTPMNA 48 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~-P~l~La~~L~~rGh~V~~~~~~~~~ 48 (484)
.+||++...|+ +..+ =.+.|.+.|+++|++|.++.++...
T Consensus 7 ~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~ 47 (201)
T 3lqk_A 7 GKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQ 47 (201)
T ss_dssp TCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSC
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHH
Confidence 46899999888 4555 7899999999999999999887543
No 83
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=64.76 E-value=78 Score=29.14 Aligned_cols=36 Identities=11% Similarity=-0.038 Sum_probs=24.6
Q ss_pred CCCCCcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 4 QAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 4 ~~~~~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|++ ++||+|+-.|.. .+..-++|.++||+|..+.+.
T Consensus 4 m~~-~mrivf~Gt~~f-----a~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 4 MSQ-SLRIVFAGTPDF-----AARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp ----CCEEEEECCSHH-----HHHHHHHHHTSSSEEEEEECC
T ss_pred ccc-CCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEcC
Confidence 455 899999977532 345567788899998877664
No 84
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=64.74 E-value=9.2 Score=32.44 Aligned_cols=43 Identities=16% Similarity=0.126 Sum_probs=36.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhH
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQN 53 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~ 53 (484)
||++...|+.|-+ =...|.++|+++|++|.++.++...+.+..
T Consensus 3 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 3 KIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp EEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 7999999998855 579999999999999999998866555544
No 85
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=64.62 E-value=6.1 Score=34.07 Aligned_cols=40 Identities=13% Similarity=-0.128 Sum_probs=32.0
Q ss_pred CcEEEEEcCCCCCCHHH-HHHHHHHHHHCCCeEEEEeCCCch
Q 011490 8 QLHFILFPFLAQGHMIP-MIDIARLLAQHGALVTIVTTPMNA 48 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P-~l~La~~L~~rGh~V~~~~~~~~~ 48 (484)
.+||++...|+ +..+- .+.|.+.|+++|++|.++.++...
T Consensus 5 ~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 5 GKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 46899988887 45665 899999999999999999988544
No 86
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=64.60 E-value=10 Score=36.75 Aligned_cols=35 Identities=23% Similarity=0.277 Sum_probs=24.7
Q ss_pred HHHHHHHHhcCCCCeEEEecC--CCcchHHHHHHcCCCc
Q 011490 107 LPLETLFKEIQPKPSCLISDV--CLPWTVSSACKFNVPR 143 (484)
Q Consensus 107 ~~l~~~l~~~~~~~D~vI~D~--~~~~a~~~A~~lgIP~ 143 (484)
+.+.++.++ .++|.|+.-. ....+..+|+.+|+|.
T Consensus 65 ~~~~~~~~~--~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 65 DVVRQTFVE--FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHHHHHHH--SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHHHhhhh--cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 345566667 7999998543 3345667889999994
No 87
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=64.38 E-value=72 Score=27.76 Aligned_cols=104 Identities=8% Similarity=-0.018 Sum_probs=56.7
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHC--CCeEEEEeCC-CchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQH--GALVTIVTTP-MNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCE 84 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~r--Gh~V~~~~~~-~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~ 84 (484)
.+||+|+.+++. + -+.++.+.|.+. +++|..+.+. ......+.. . ..++.+..++. ..
T Consensus 22 ~~rI~~l~SG~g-~--~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A-~-----~~gIp~~~~~~--------~~-- 82 (229)
T 3auf_A 22 MIRIGVLISGSG-T--NLQAILDGCREGRIPGRVAVVISDRADAYGLERA-R-----RAGVDALHMDP--------AA-- 82 (229)
T ss_dssp CEEEEEEESSCC-H--HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHH-H-----HTTCEEEECCG--------GG--
T ss_pred CcEEEEEEeCCc-H--HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHH-H-----HcCCCEEEECc--------cc--
Confidence 469999987764 2 366777888876 6887666543 322211211 1 12566654321 00
Q ss_pred ccCCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-cchHHHHHHcCCCcEEE
Q 011490 85 SWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCL-PWTVSSACKFNVPRIVF 146 (484)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~v~~ 146 (484)
... . ....+.+.+.+++ .+||++|+-.+. .-...+-....-.++-+
T Consensus 83 ----~~~-------r---~~~~~~~~~~l~~--~~~Dliv~agy~~IL~~~~l~~~~~~~iNi 129 (229)
T 3auf_A 83 ----YPS-------R---TAFDAALAERLQA--YGVDLVCLAGYMRLVRGPMLTAFPNRILNI 129 (229)
T ss_dssp ----SSS-------H---HHHHHHHHHHHHH--TTCSEEEESSCCSCCCHHHHHHSTTCEEEE
T ss_pred ----ccc-------h---hhccHHHHHHHHh--cCCCEEEEcChhHhCCHHHHhhccCCEEEE
Confidence 000 0 1122345667777 899999987753 33334445555555654
No 88
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=63.40 E-value=17 Score=30.44 Aligned_cols=46 Identities=15% Similarity=0.031 Sum_probs=30.8
Q ss_pred eEeeCcCChhh-hcCCCCccccccccchhhHHH---HHHcCCCEeccccc
Q 011490 342 LLIRGWAPQVV-ILSHPAIGGFLTHCGWNSVLE---AVSNGLPMVTWPFF 387 (484)
Q Consensus 342 v~~~~~~pq~~-ll~~~~~~~~I~HgG~~s~~e---al~~GvP~l~~P~~ 387 (484)
.++.++.+... ++..-+-..++--||.||+-| ++.+++|++.+|.|
T Consensus 91 ~i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 91 PIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp EEECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred eEEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 34556666533 443333345777899998664 57799999999984
No 89
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=63.04 E-value=13 Score=29.43 Aligned_cols=38 Identities=5% Similarity=-0.061 Sum_probs=28.3
Q ss_pred cEEEEE-cCC--CCCCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 011490 9 LHFILF-PFL--AQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (484)
Q Consensus 9 ~kil~~-~~~--~~GHv~P~l~La~~L~~rGh~V~~~~~~~ 46 (484)
.|++|+ +.+ ........+.||...++.||+|+++-...
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~d 56 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIX 56 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeC
Confidence 344443 444 46678889999999999999999887654
No 90
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=61.02 E-value=59 Score=30.15 Aligned_cols=32 Identities=16% Similarity=0.094 Sum_probs=23.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
++||+|+. --+-...+.++|.++||+|..+.+
T Consensus 22 ~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 22 SMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp CCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEe
Confidence 68999992 223344567899999999887754
No 91
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=58.57 E-value=64 Score=29.72 Aligned_cols=104 Identities=12% Similarity=0.065 Sum_probs=56.5
Q ss_pred cEEEEEcCCCCCC-----HHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCC
Q 011490 9 LHFILFPFLAQGH-----MIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGC 83 (484)
Q Consensus 9 ~kil~~~~~~~GH-----v~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~ 83 (484)
..|++.|....+. ..-+..|++.|.++|++|.+..++...+..+....... ......... +..
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~~-~~~~~~~~~---------l~g-- 248 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALN-TEQQAWCRN---------LAG-- 248 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSC-HHHHTTEEE---------CTT--
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhhh-hccccceEe---------ccC--
Confidence 3466655431222 33788999999999999988766654333333211000 000000110 000
Q ss_pred CccCCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCCcchHHHHHHcCCCcEEEecc
Q 011490 84 ESWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCLPWTVSSACKFNVPRIVFHGF 149 (484)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~v~~~~~ 149 (484)
. ....++..+++ ..|++|+.. .+...+|..+|+|+|.++..
T Consensus 249 -------~------------~sl~e~~ali~----~a~l~I~~D--sg~~HlAaa~g~P~v~lfg~ 289 (348)
T 1psw_A 249 -------E------------TQLDQAVILIA----ACKAIVTND--SGLMHVAAALNRPLVALYGP 289 (348)
T ss_dssp -------T------------SCHHHHHHHHH----TSSEEEEES--SHHHHHHHHTTCCEEEEESS
T ss_pred -------c------------CCHHHHHHHHH----hCCEEEecC--CHHHHHHHHcCCCEEEEECC
Confidence 0 01123345554 589999754 35677899999999997543
No 92
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=58.54 E-value=52 Score=28.98 Aligned_cols=35 Identities=11% Similarity=0.128 Sum_probs=27.8
Q ss_pred cEEEEEcCC--CCCCHHHHHHHHHHHHHCCCeEEEEe
Q 011490 9 LHFILFPFL--AQGHMIPMIDIARLLAQHGALVTIVT 43 (484)
Q Consensus 9 ~kil~~~~~--~~GHv~P~l~La~~L~~rGh~V~~~~ 43 (484)
.|.+|++.. .-|=..=...|++.|+++|.+|.++=
T Consensus 21 ~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 21 GHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 344444433 66899999999999999999999984
No 93
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=57.92 E-value=13 Score=32.59 Aligned_cols=39 Identities=18% Similarity=0.155 Sum_probs=35.7
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~ 46 (484)
+++|++..-|+-|-..-++.+|..|+++|+.|.++....
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 789999999999999999999999999999998886644
No 94
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=57.05 E-value=82 Score=30.98 Aligned_cols=34 Identities=24% Similarity=0.137 Sum_probs=26.6
Q ss_pred HHHHHHHhcCCCCeEEEecCCCcchHHHHHHcCCCcEEE
Q 011490 108 PLETLFKEIQPKPSCLISDVCLPWTVSSACKFNVPRIVF 146 (484)
Q Consensus 108 ~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~v~~ 146 (484)
.+.+++++ .+||++|.... ...+|+++|||++.+
T Consensus 392 el~~~i~~--~~pDL~ig~~~---~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 392 VLLKTVDE--YQADILIAGGR---NMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHHH--TTCSEEECCGG---GHHHHHHTTCCBCCC
T ss_pred HHHHHHHh--cCCCEEEECCc---hhHHHHHcCCCEEEe
Confidence 44667777 79999998754 456899999999863
No 95
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=57.04 E-value=8.1 Score=32.55 Aligned_cols=42 Identities=14% Similarity=0.123 Sum_probs=34.5
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhh
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQ 52 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~ 52 (484)
||++...|+.|=+ =...|.+.|+++|++|.++.++...+.+.
T Consensus 4 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 45 (181)
T 1g63_A 4 KLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFIN 45 (181)
T ss_dssp CEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSC
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 7888888887666 67899999999999999999886554443
No 96
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=55.24 E-value=17 Score=30.91 Aligned_cols=30 Identities=10% Similarity=-0.027 Sum_probs=25.0
Q ss_pred CCCeEEEecCCCcchHHHHHHcCCCcEEEecch
Q 011490 118 PKPSCLISDVCLPWTVSSACKFNVPRIVFHGFS 150 (484)
Q Consensus 118 ~~~D~vI~D~~~~~a~~~A~~lgIP~v~~~~~~ 150 (484)
.++|+||.|.. +..+|+++|+|.+.+.+..
T Consensus 141 ~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 141 ENIKIVVSGKT---VTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp TTCCEEEECHH---HHHHHHHTTCEEEECCCCH
T ss_pred CCCeEEECCHH---HHHHHHHcCCcEEEEecCH
Confidence 59999999875 4779999999999976644
No 97
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=54.44 E-value=15 Score=32.16 Aligned_cols=29 Identities=7% Similarity=0.009 Sum_probs=24.5
Q ss_pred CCccccccccchhhHHHHHHcCCCEecccccc
Q 011490 357 PAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFA 388 (484)
Q Consensus 357 ~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~ 388 (484)
+++ +|+.||........ .++|+|-++..+
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 666 99999999998875 589999999843
No 98
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=54.27 E-value=1.1e+02 Score=30.49 Aligned_cols=34 Identities=12% Similarity=0.141 Sum_probs=24.3
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCc
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMN 47 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~ 47 (484)
+||+++. +-.-.+.|++.|.+-|.+|..+.....
T Consensus 365 KrvaI~g-----d~~~~~~la~fL~elGm~vv~v~~~~~ 398 (523)
T 3u7q_B 365 KRFALWG-----DPDFVMGLVKFLLELGCEPVHILCHNG 398 (523)
T ss_dssp CEEEEEC-----SHHHHHHHHHHHHHTTCEEEEEEETTC
T ss_pred CEEEEEC-----CchHHHHHHHHHHHcCCEEEEEEeCCC
Confidence 5788773 344567888888889999888765443
No 99
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=54.20 E-value=8.2 Score=33.27 Aligned_cols=44 Identities=16% Similarity=0.127 Sum_probs=33.9
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHH-CCCeEEEEeCCCchhhhh
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQ-HGALVTIVTTPMNAARFQ 52 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~-rGh~V~~~~~~~~~~~v~ 52 (484)
++||++...|+.+=+. ...|.+.|++ +|++|.++.++...+.+.
T Consensus 19 ~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi~ 63 (206)
T 1qzu_A 19 KFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFYS 63 (206)
T ss_dssp SEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSSC
T ss_pred CCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHhC
Confidence 5689999988887554 6999999999 899999999886554443
No 100
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=53.97 E-value=77 Score=29.38 Aligned_cols=40 Identities=20% Similarity=0.152 Sum_probs=32.6
Q ss_pred cEEEEEc-CCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCch
Q 011490 9 LHFILFP-FLAQGHMIPMIDIARLLAQHGALVTIVTTPMNA 48 (484)
Q Consensus 9 ~kil~~~-~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~ 48 (484)
++|+|++ -|+-|-..-...||..|+++|++|.++......
T Consensus 16 ~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~ 56 (334)
T 3iqw_A 16 LRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAH 56 (334)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSC
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 4565554 458899999999999999999999999876543
No 101
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=53.53 E-value=61 Score=32.26 Aligned_cols=35 Identities=17% Similarity=0.217 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCc
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMN 47 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~ 47 (484)
.+||+++. +-.=.+.|++.|.+-|-+|..+.....
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~~~ 394 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSHNA 394 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEETTC
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeCCC
Confidence 35788874 344567888889999999887655443
No 102
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=53.40 E-value=72 Score=28.30 Aligned_cols=33 Identities=21% Similarity=0.273 Sum_probs=24.9
Q ss_pred CCCCeEEE-ecCCC-cchHHHHHHcCCCcEEEecc
Q 011490 117 QPKPSCLI-SDVCL-PWTVSSACKFNVPRIVFHGF 149 (484)
Q Consensus 117 ~~~~D~vI-~D~~~-~~a~~~A~~lgIP~v~~~~~ 149 (484)
...||+|| .|... .-+..=|.++|||+|.+.-+
T Consensus 156 ~~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 156 KRLPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp SSCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred ccCCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 46899776 56643 46778899999999997544
No 103
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=52.83 E-value=11 Score=32.07 Aligned_cols=30 Identities=3% Similarity=0.091 Sum_probs=25.1
Q ss_pred CCCccccccccchhhHHHHHHcCCCEecccccc
Q 011490 356 HPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFA 388 (484)
Q Consensus 356 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~ 388 (484)
.+++ +|+.||........ .++|+|-+|..+
T Consensus 51 ~~dV--IISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 51 EVDA--IISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TCSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeE--EEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 4566 99999999998875 689999999855
No 104
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=50.80 E-value=17 Score=32.51 Aligned_cols=40 Identities=20% Similarity=0.110 Sum_probs=31.1
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchh
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAA 49 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~ 49 (484)
+||||+..=-+. |---+.+|+++|++ +|+|+++.+...+.
T Consensus 11 ~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~S 50 (261)
T 3ty2_A 11 KLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRS 50 (261)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCT
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCc
Confidence 689988876555 55567888999887 89999999876544
No 105
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=50.76 E-value=22 Score=24.86 Aligned_cols=49 Identities=14% Similarity=0.192 Sum_probs=32.1
Q ss_pred cCCCEeccccccchhhHHHHHHHH--hcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhc
Q 011490 377 NGLPMVTWPFFADQFCNEKLVVQV--LRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMD 439 (484)
Q Consensus 377 ~GvP~l~~P~~~DQ~~na~~~~e~--~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 439 (484)
+|+|++++-..+.|.+.-..--|. -|+...+-. ..++++|.+.+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakkegvsydvlk--------------stdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLK--------------STDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEE--------------CCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhcCcchhhhc--------------cCCHHHHHHHHHHHHH
Confidence 688999888877775432221133 345444433 3789999999988774
No 106
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=49.93 E-value=95 Score=27.04 Aligned_cols=31 Identities=16% Similarity=0.198 Sum_probs=23.1
Q ss_pred CCCeEEE-ecCCC-cchHHHHHHcCCCcEEEec
Q 011490 118 PKPSCLI-SDVCL-PWTVSSACKFNVPRIVFHG 148 (484)
Q Consensus 118 ~~~D~vI-~D~~~-~~a~~~A~~lgIP~v~~~~ 148 (484)
..||+|| .|+.. .-+..-|.++|||+|.+.-
T Consensus 156 ~~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivD 188 (231)
T 3bbn_B 156 GLPDIVIIVDQQEEYTALRECITLGIPTICLID 188 (231)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHTTTCCEEECCC
T ss_pred cCCCEEEEeCCccccHHHHHHHHhCCCEEEEec
Confidence 3699876 56643 4577889999999999643
No 107
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=49.30 E-value=22 Score=31.12 Aligned_cols=25 Identities=32% Similarity=0.357 Sum_probs=20.9
Q ss_pred CCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 19 QGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 19 ~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
.|.+ -.++|++|+++|++|++++.+
T Consensus 28 SG~m--G~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 28 TGHL--GKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CCHH--HHHHHHHHHHTTCEEEEEECT
T ss_pred CCHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 5543 567899999999999999876
No 108
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=49.26 E-value=18 Score=32.81 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=25.0
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|||++. |+.|-+= -.|+++|.++||+|+.++-.
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 566544 6677665 46889999999999998753
No 109
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=49.23 E-value=1.3e+02 Score=25.89 Aligned_cols=107 Identities=10% Similarity=0.012 Sum_probs=0.0
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHHCC--CeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCC
Q 011490 3 SQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHG--ALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLP 80 (484)
Q Consensus 3 ~~~~~~~kil~~~~~~~GHv~P~l~La~~L~~rG--h~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~ 80 (484)
+|.+ ++||+++.+++. .-+.+|.+++.+.+ ++|..+.+..-.....+..... ++.+..++.....+
T Consensus 4 ~~~~-~~ri~vl~SG~g---snl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~-----gIp~~~~~~~~~~~--- 71 (215)
T 3kcq_A 4 SMKK-ELRVGVLISGRG---SNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSY-----GIPTFVVKRKPLDI--- 71 (215)
T ss_dssp ---C-CEEEEEEESSCC---HHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHT-----TCCEEECCBTTBCH---
T ss_pred CCCC-CCEEEEEEECCc---HHHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHc-----CCCEEEeCcccCCh---
Q ss_pred CCCCccCCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-cchHHHHHHcCCCcEEEecc
Q 011490 81 EGCESWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCL-PWTVSSACKFNVPRIVFHGF 149 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~v~~~~~ 149 (484)
+.+.+.+++ .+||++|+-.+. .-...+-....-.++-++++
T Consensus 72 --------------------------~~~~~~L~~--~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 72 --------------------------EHISTVLRE--HDVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp --------------------------HHHHHHHHH--TTCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred --------------------------HHHHHHHHH--hCCCEEEEeCCceEeCHHHHhhccCCeEEECcc
No 110
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=48.56 E-value=70 Score=29.88 Aligned_cols=39 Identities=21% Similarity=0.173 Sum_probs=32.6
Q ss_pred CcEEEEEcC-CCCCCHHHHHHHHHHHH--HCCCeEEEEeCCC
Q 011490 8 QLHFILFPF-LAQGHMIPMIDIARLLA--QHGALVTIVTTPM 46 (484)
Q Consensus 8 ~~kil~~~~-~~~GHv~P~l~La~~L~--~rGh~V~~~~~~~ 46 (484)
+.+|++++. |+-|-..-...||..|+ ++|+.|.++....
T Consensus 17 ~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~ 58 (348)
T 3io3_A 17 SLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDP 58 (348)
T ss_dssp TCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 346666654 58899999999999999 8999999998764
No 111
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=47.57 E-value=12 Score=30.17 Aligned_cols=33 Identities=27% Similarity=0.390 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
+.||+++- .|++- ..+++.|.++||+|+++...
T Consensus 3 ~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 46888884 36655 68899999999999999764
No 112
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=46.64 E-value=1.2e+02 Score=27.74 Aligned_cols=100 Identities=15% Similarity=0.051 Sum_probs=0.0
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCch----------hhhhHHHhhcccCCCceEEEEeeCCCcc
Q 011490 7 SQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNA----------ARFQNVIERGIQSGLRIQVIEFYFPCQE 76 (484)
Q Consensus 7 ~~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~----------~~v~~~~~~~~~~~~~i~~~~i~~~~~~ 76 (484)
+++||+|+-.+..+ ...-++|.+.||+|..+.+.... ..+....... ++.+..
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~-----gIpv~~------- 64 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEK-----GLPVFQ------- 64 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHT-----TCCEEC-------
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHHc-----CCcEEe-------
Q ss_pred CCCCCCCCccCCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-cchHHHHHHcCCCcEEEecc
Q 011490 77 VGLPEGCESWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCL-PWTVSSACKFNVPRIVFHGF 149 (484)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~v~~~~~ 149 (484)
+.... .+.+.+.+++ .+||++|+-.+. .-...+-......++-++++
T Consensus 65 ---~~~~~---------------------~~~~~~~l~~--~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 112 (314)
T 1fmt_A 65 ---PVSLR---------------------PQENQQLVAE--LQADVMVVVAYGLILPKAVLEMPRLGCINVHGS 112 (314)
T ss_dssp ---CSCSC---------------------SHHHHHHHHH--TTCSEEEEESCCSCCCHHHHHSSTTCEEEEESS
T ss_pred ---cCCCC---------------------CHHHHHHHHh--cCCCEEEEeeccccCCHHHHhhccCCEEEEcCC
No 113
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=45.34 E-value=54 Score=32.03 Aligned_cols=34 Identities=24% Similarity=0.226 Sum_probs=27.4
Q ss_pred HHHHHHHhcCCCCeEEEecCCCcchHHHHHHcCCCcEEE
Q 011490 108 PLETLFKEIQPKPSCLISDVCLPWTVSSACKFNVPRIVF 146 (484)
Q Consensus 108 ~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~v~~ 146 (484)
.+++++++ .+||++|.+.. ...+|+++|||++.+
T Consensus 376 ~l~~~i~~--~~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 376 DVHQWIKN--EGVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHH--SCCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHHh--cCCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 35677777 79999998875 466799999999974
No 114
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=45.06 E-value=28 Score=35.09 Aligned_cols=48 Identities=8% Similarity=-0.002 Sum_probs=40.6
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHH
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVI 55 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~ 55 (484)
+.+|++.+.++..|-....-++..|..+|++|+.++...-.+.+....
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~iv~aa 145 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTA 145 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHHHHHH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 679999999999999999999999999999999997755544444443
No 115
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=44.25 E-value=1.5e+02 Score=28.57 Aligned_cols=42 Identities=29% Similarity=0.189 Sum_probs=34.8
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHH-CCCeEEEEeCCCchhhh
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQ-HGALVTIVTTPMNAARF 51 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~-rGh~V~~~~~~~~~~~v 51 (484)
-+++...|+.|-..=++.+|...+. .|..|.|++.+...+.+
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~l 244 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQL 244 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHHH
Confidence 4677788899999999999999987 48999999987665544
No 116
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=43.68 E-value=27 Score=27.02 Aligned_cols=32 Identities=16% Similarity=0.299 Sum_probs=24.2
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
.+||+++- .|.+- ..+|+.|.++||+|+++..
T Consensus 4 ~m~i~IiG---~G~iG--~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAG---IGRVG--YTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEEC---CSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEC---CCHHH--HHHHHHHHhCCCeEEEEEC
Confidence 46888883 36664 4678999999999999865
No 117
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=42.75 E-value=49 Score=29.21 Aligned_cols=37 Identities=14% Similarity=0.031 Sum_probs=28.2
Q ss_pred cEEEEEcCCCCC-----------CHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQG-----------HMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~G-----------Hv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
+||+++.....+ ...=++.--..|++.|++|+++++.
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478888776422 1556777788899999999999965
No 118
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=41.62 E-value=74 Score=28.31 Aligned_cols=33 Identities=27% Similarity=0.098 Sum_probs=25.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|+++++-++.| =-.++|+.|+++|++|+++...
T Consensus 11 k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 11 KTALITGGARG---MGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCCch---HHHHHHHHHHHCCCeEEEEeCC
Confidence 67888865543 2468899999999999988653
No 119
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=40.86 E-value=96 Score=27.20 Aligned_cols=21 Identities=10% Similarity=0.156 Sum_probs=16.1
Q ss_pred chHHHHHHHHhcCCCCeEEEecC
Q 011490 105 LRLPLETLFKEIQPKPSCLISDV 127 (484)
Q Consensus 105 ~~~~l~~~l~~~~~~~D~vI~D~ 127 (484)
....+.+++++ .+||+|++-.
T Consensus 85 ~~~~l~~~ir~--~~PdvV~t~~ 105 (242)
T 2ixd_A 85 YIREIVKVIRT--YKPKLVFAPY 105 (242)
T ss_dssp HHHHHHHHHHH--HCCSEEEEEC
T ss_pred HHHHHHHHHHH--cCCCEEEECC
Confidence 45677788888 8999999743
No 120
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=39.31 E-value=18 Score=33.34 Aligned_cols=36 Identities=8% Similarity=-0.116 Sum_probs=27.4
Q ss_pred EEEEcCCCCCCH--------------HHHHHHHHHHHHCCCeEEEEeCCC
Q 011490 11 FILFPFLAQGHM--------------IPMIDIARLLAQHGALVTIVTTPM 46 (484)
Q Consensus 11 il~~~~~~~GHv--------------~P~l~La~~L~~rGh~V~~~~~~~ 46 (484)
|++.+.|+.=.+ ..-.+||+++.++|++|++++.+.
T Consensus 40 VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 40 VLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp EEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred EEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 666666665444 256789999999999999998764
No 121
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=37.44 E-value=49 Score=24.37 Aligned_cols=59 Identities=3% Similarity=-0.018 Sum_probs=37.3
Q ss_pred CCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHhhc
Q 011490 421 NGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQQA 483 (484)
Q Consensus 421 ~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~~ 483 (484)
++|.++.++|+..++..+.+.- .-...-..+.+.+++. +..|.+...+++|+..+...+
T Consensus 27 ~~G~Is~~EL~~~l~~~~~~~l---~~~~~~~ev~~~i~~~-D~d~DG~Idf~EF~~~m~~~~ 85 (100)
T 3nxa_A 27 VKNKISKSSFREMLQKELNHML---SDTGNRKAADKLIQNL-DANHDGRISFDEYWTLIGGIT 85 (100)
T ss_dssp CTTCBCHHHHHHHHHHHSTTTT---CSSHHHHHHHHHHHHS-CCCSSCCBCHHHHHHHHHHHH
T ss_pred CCCeEcHHHHHHHHHHHccccc---cccccHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHHH
Confidence 3579999999999988653210 0001123455555544 666777788888888776553
No 122
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=37.29 E-value=50 Score=30.16 Aligned_cols=33 Identities=21% Similarity=0.138 Sum_probs=27.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~ 46 (484)
+||+++-.|+.|- .+|..|++.||+|+++....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc
Confidence 5799998888874 56899999999999998754
No 123
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=37.14 E-value=2e+02 Score=24.71 Aligned_cols=34 Identities=32% Similarity=0.279 Sum_probs=25.3
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
.|+++++-++.| + -..+|+.|+++|++|.+....
T Consensus 7 ~k~vlITGas~g-I--G~~~a~~l~~~G~~v~~~~~~ 40 (255)
T 3icc_A 7 GKVALVTGASRG-I--GRAIAKRLANDGALVAIHYGN 40 (255)
T ss_dssp TCEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCh-H--HHHHHHHHHHCCCeEEEEeCC
Confidence 367888866543 3 568899999999999886543
No 124
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=36.63 E-value=45 Score=28.29 Aligned_cols=37 Identities=24% Similarity=0.205 Sum_probs=31.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
+..++++.++..|+-.-+..+++.|+++|+.|..+-.
T Consensus 31 ~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 31 PLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp CEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 3467888888889888999999999999999887754
No 125
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=36.44 E-value=1.8e+02 Score=23.89 Aligned_cols=143 Identities=15% Similarity=0.104 Sum_probs=77.7
Q ss_pred CcEEEEecCCCccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHh---cCCCeEeeCcCChhhhcC
Q 011490 279 GSAVYVCLGSLCDSSTRQLIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERI---EGRGLLIRGWAPQVVILS 355 (484)
Q Consensus 279 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~---~~~nv~~~~~~pq~~ll~ 355 (484)
+|.|-|-+||.. +....++....++..+.++=..+-+-.. .|+.+.+.. ...+
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR--------~p~~l~~~~~~a~~~g-------------- 66 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHR--------TPDYMFEYAETARERG-------------- 66 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------SHHHHHHHHHHTTTTT--------------
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEeccC--------CHHHHHHHHHHHHhCC--------------
Confidence 345777778765 5667778888888888887665544322 444332211 1111
Q ss_pred CCCccccccccchhhHHHHH---HcCCCEeccccccch-hhHHHH--HHHH--hcceeEe-ccCCCCCCcccccCCCccC
Q 011490 356 HPAIGGFLTHCGWNSVLEAV---SNGLPMVTWPFFADQ-FCNEKL--VVQV--LRIGVTI-GAERPPSLADEERNGVPVK 426 (484)
Q Consensus 356 ~~~~~~~I~HgG~~s~~eal---~~GvP~l~~P~~~DQ-~~na~~--~~e~--~G~g~~l-~~~~~~~~~~~~~~~~~~~ 426 (484)
.++ +|.=.|...-+-.+ ..-.|+|.+|..... ...... +. . .|+.+.. ..++ .+..+
T Consensus 67 -~~V--iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSiv-qmP~GvpVatV~I~~----------a~~~n 132 (170)
T 1xmp_A 67 -LKV--IIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIV-QMPGGVPVATVAIGK----------AGSTN 132 (170)
T ss_dssp -CCE--EEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHH-CCCTTCCCEECCSSH----------HHHHH
T ss_pred -CcE--EEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCeeEEEecCC----------cchHH
Confidence 233 66666643332222 346899999985421 111111 22 3 4443221 1110 01255
Q ss_pred HHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHhh
Q 011490 427 KEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEE 464 (484)
Q Consensus 427 ~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~ 464 (484)
+.-++..|- -+.|+ .++++.+.+++.+++.+.+
T Consensus 133 AallAaqIl-a~~d~----~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 133 AGLLAAQIL-GSFHD----DIHDALELRREAIEKDVRE 165 (170)
T ss_dssp HHHHHHHHH-HTTCH----HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH-ccCCH----HHHHHHHHHHHHHHHHHHh
Confidence 666665554 34566 8888888888888866544
No 126
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=36.20 E-value=33 Score=27.48 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=25.1
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
..+|+++-. |.+- ..+++.|.++|++|+++...
T Consensus 19 ~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 578888854 5443 56889999999999998654
No 127
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=36.05 E-value=1e+02 Score=27.30 Aligned_cols=32 Identities=25% Similarity=0.186 Sum_probs=24.7
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
|+++++-++.| =-..+|+.|+++|++|+++..
T Consensus 11 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~~ 42 (287)
T 3pxx_A 11 KVVLVTGGARG---QGRSHAVKLAEEGADIILFDI 42 (287)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCCh---HHHHHHHHHHHCCCeEEEEcc
Confidence 67888865542 346899999999999998864
No 128
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=35.95 E-value=2e+02 Score=24.46 Aligned_cols=103 Identities=9% Similarity=0.023 Sum_probs=55.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHC--CCeEEEEeCC-CchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCCc
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQH--GALVTIVTTP-MNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCES 85 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~r--Gh~V~~~~~~-~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~ 85 (484)
+||+++.++..+ -+.+|.+.+++. +|+|..+.+. ......+.. . ..++.+..++. ..
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A-~-----~~gIp~~~~~~--------~~--- 60 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERA-R-----QAGIATHTLIA--------SA--- 60 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHH-H-----HTTCEEEECCG--------GG---
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHH-H-----HcCCcEEEeCc--------cc---
Confidence 478888876553 366777777765 6888766543 322222222 1 12566655321 00
Q ss_pred cCCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-cchHHHHHHcCCCcEEE
Q 011490 86 WDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCL-PWTVSSACKFNVPRIVF 146 (484)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~v~~ 146 (484)
... . ....+.+.+.+++ .+||++|+-.+. .-...+-....-.++-+
T Consensus 61 ---~~~-------r---~~~~~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNi 107 (212)
T 1jkx_A 61 ---FDS-------R---EAYDRELIHEIDM--YAPDVVVLAGFMRILSPAFVSHYAGRLLNI 107 (212)
T ss_dssp ---CSS-------H---HHHHHHHHHHHGG--GCCSEEEESSCCSCCCHHHHHHTTTSEEEE
T ss_pred ---ccc-------h---hhccHHHHHHHHh--cCCCEEEEeChhhhCCHHHHhhccCCEEEE
Confidence 000 0 1122345667777 899999987753 33334444455556654
No 129
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=35.66 E-value=1.3e+02 Score=25.25 Aligned_cols=61 Identities=11% Similarity=0.138 Sum_probs=39.2
Q ss_pred cEE-EEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCC---chhhhhHHHhhcccCCCceEEEEee
Q 011490 9 LHF-ILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPM---NAARFQNVIERGIQSGLRIQVIEFY 71 (484)
Q Consensus 9 ~ki-l~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~---~~~~v~~~~~~~~~~~~~i~~~~i~ 71 (484)
.|| +|+..+...+-.....+++.|++.|+.|.+++-.. +.+ ++....... .+.+-.|..+|
T Consensus 107 ~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~-l~~la~~~n-~~~~s~~~~~~ 171 (192)
T 2x5n_A 107 QRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQNESA-LQHFIDAAN-SSDSCHLVSIP 171 (192)
T ss_dssp EEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC---CH-HHHHHHHHC-STTCCEEEEEC
T ss_pred ceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCCccHH-HHHHHHhcc-CCCceEEEEec
Confidence 354 45555555577888999999999999999886432 223 555544333 23456777765
No 130
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=35.61 E-value=19 Score=32.97 Aligned_cols=32 Identities=16% Similarity=0.096 Sum_probs=26.2
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
++||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 7 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 7 DFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 6799999766665 4689999999999998854
No 131
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=35.61 E-value=41 Score=30.61 Aligned_cols=33 Identities=15% Similarity=0.214 Sum_probs=24.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~ 46 (484)
+|+++ |+.|.+ -..|+++|.++||+|+.++-..
T Consensus 13 ~ilVt--GatG~i--G~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIF--GGTGYI--GNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEE--TTTSTT--HHHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEE--CCCchH--HHHHHHHHHHCCCcEEEEECCC
Confidence 55554 556666 3578899999999999887643
No 132
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=35.58 E-value=99 Score=24.09 Aligned_cols=48 Identities=10% Similarity=-0.052 Sum_probs=32.3
Q ss_pred cCCCEeccccccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHhcC
Q 011490 377 NGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLMDE 440 (484)
Q Consensus 377 ~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~ 440 (484)
..+|+|++--..+. ...... -..|+--.+.+. ++.++|.++|+.++..
T Consensus 74 ~~~pii~ls~~~~~-~~~~~~-~~~g~~~~l~kP--------------~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 74 PDLPMILVTGHGDI-PMAVQA-IQDGAYDFIAKP--------------FAADRLVQSARRAEEK 121 (155)
T ss_dssp TTSCEEEEECGGGH-HHHHHH-HHTTCCEEEESS--------------CCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHH-HhcCCCeEEeCC--------------CCHHHHHHHHHHHHHH
Confidence 47888887544443 333444 256765556544 8999999999999863
No 133
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=35.55 E-value=34 Score=26.48 Aligned_cols=35 Identities=26% Similarity=0.119 Sum_probs=24.1
Q ss_pred HHHHhcCCCCeEEEecCCCc--chHHHHHH---cCCCcEEEe
Q 011490 111 TLFKEIQPKPSCLISDVCLP--WTVSSACK---FNVPRIVFH 147 (484)
Q Consensus 111 ~~l~~~~~~~D~vI~D~~~~--~a~~~A~~---lgIP~v~~~ 147 (484)
+.+++ .+||+||.|..++ -+..+++. .++|.+.++
T Consensus 47 ~~~~~--~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 47 DIARK--GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHH--CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHh--CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 34566 7999999999764 34555544 478977653
No 134
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=35.27 E-value=50 Score=30.29 Aligned_cols=40 Identities=23% Similarity=0.225 Sum_probs=30.0
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHH
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNV 54 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~ 54 (484)
+||+++-.|+.| ..+|..|++.||+|+++.... .+.+.+.
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRSD-YETVKAK 42 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECSTT-HHHHHHH
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCh-HHHHHhC
Confidence 589999877776 457889999999999998754 2444433
No 135
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=34.84 E-value=25 Score=25.57 Aligned_cols=56 Identities=5% Similarity=0.026 Sum_probs=35.6
Q ss_pred CCccCHHHHHHHHHHHhcCChhHHHHH--HHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHhhc
Q 011490 422 GVPVKKEDVKKAINMLMDEGEERDERR--RRAREYGETAKTAIEEGGSSYLNIKLLIKDILQQA 483 (484)
Q Consensus 422 ~~~~~~~~l~~ai~~vl~~~~~~~~~r--~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~~ 483 (484)
+|.++.++|++.++.-+.+ .+. ..-..+.+.+++. +..|.....+++|++.+.+.+
T Consensus 26 ~G~Is~~EL~~~l~~~lg~-----~l~~~~~~~ev~~~i~~~-D~d~DG~Idf~EF~~~~~~~~ 83 (93)
T 4eto_A 26 KFKLNKSELKELLTRELPS-----FLGKRTDEAAFQKLMSNL-DSNRDNEVDFQEYCVFLSCIA 83 (93)
T ss_dssp TTSBCHHHHHHHHHHHCGG-----GC---CCHHHHHHHHHHH-CTTSSSSBCHHHHHHHHHHHH
T ss_pred CCeECHHHHHHHHHHHhhh-----hccCCCCHHHHHHHHHHH-CCCCCCCCcHHHHHHHHHHHH
Confidence 3689999999999864421 000 0123445555544 666777788888888777653
No 136
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=34.80 E-value=44 Score=30.24 Aligned_cols=38 Identities=18% Similarity=0.325 Sum_probs=30.1
Q ss_pred CCcEEEEEcCCCCCCHHHH--HHHHHHHHHCC-CeEEEEeCC
Q 011490 7 SQLHFILFPFLAQGHMIPM--IDIARLLAQHG-ALVTIVTTP 45 (484)
Q Consensus 7 ~~~kil~~~~~~~GHv~P~--l~La~~L~~rG-h~V~~~~~~ 45 (484)
+++|||+++ +..+|-.+. -.|++.|.+.| .+|++...+
T Consensus 3 ~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 389999994 555896555 57888888898 999999764
No 137
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=34.77 E-value=1.8e+02 Score=25.00 Aligned_cols=104 Identities=10% Similarity=0.050 Sum_probs=52.1
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHH-CCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCCcc
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQ-HGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESW 86 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~-rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~ 86 (484)
++||+++.+++...+. +|.+++.+ .+++|..+.+.......+.+.. .++.+..++.
T Consensus 12 ~~ri~vl~SG~gsnl~---all~~~~~~~~~eI~~Vis~~~a~~~~~A~~------~gIp~~~~~~-------------- 68 (215)
T 3da8_A 12 PARLVVLASGTGSLLR---SLLDAAVGDYPARVVAVGVDRECRAAEIAAE------ASVPVFTVRL-------------- 68 (215)
T ss_dssp SEEEEEEESSCCHHHH---HHHHHSSTTCSEEEEEEEESSCCHHHHHHHH------TTCCEEECCG--------------
T ss_pred CcEEEEEEeCChHHHH---HHHHHHhccCCCeEEEEEeCCchHHHHHHHH------cCCCEEEeCc--------------
Confidence 6799999887644333 34444433 2458877755433322222211 2566554320
Q ss_pred CCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-cchHHHHHHcCCCcEEE
Q 011490 87 DKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCL-PWTVSSACKFNVPRIVF 146 (484)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~v~~ 146 (484)
..... . ....+.+.+.+++ .++|++|+-.+. .-...+-....-.++-+
T Consensus 69 ~~~~~-------r---~~~d~~~~~~l~~--~~~Dlivlagy~~iL~~~~l~~~~~~~iNi 117 (215)
T 3da8_A 69 ADHPS-------R---DAWDVAITAATAA--HEPDLVVSAGFMRILGPQFLSRFYGRTLNT 117 (215)
T ss_dssp GGSSS-------H---HHHHHHHHHHHHT--TCCSEEEEEECCSCCCHHHHHHHTTTEEEE
T ss_pred ccccc-------h---hhhhHHHHHHHHh--hCCCEEEEcCchhhCCHHHHhhccCCeEEe
Confidence 00000 0 1113456677788 899999976643 32333334444445543
No 138
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=34.68 E-value=2.1e+02 Score=24.31 Aligned_cols=107 Identities=8% Similarity=-0.014 Sum_probs=0.0
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHC--CCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCCcc
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQH--GALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESW 86 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~r--Gh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~ 86 (484)
+||+++.+++.. -+.++.++|.+. +|+|..+.+......+....... ++.+..++.....+
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~-----gIp~~~~~~~~~~~--------- 66 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARE-----NVPAFVFSPKDYPS--------- 66 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHT-----TCCEEECCGGGSSS---------
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHc-----CCCEEEeCcccccc---------
Q ss_pred CCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-cchHHHHHHcCCCcEEEecc
Q 011490 87 DKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCL-PWTVSSACKFNVPRIVFHGF 149 (484)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~v~~~~~ 149 (484)
-....+.+.+.+++ .+||++|+-.+. .-...+-....-.++-++++
T Consensus 67 ---------------~~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 67 ---------------KAAFESEILRELKG--RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp ---------------HHHHHHHHHHHHHH--TTCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred ---------------hhhhHHHHHHHHHh--cCCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
No 139
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=34.26 E-value=57 Score=28.33 Aligned_cols=40 Identities=13% Similarity=0.110 Sum_probs=27.8
Q ss_pred HHHHHHHHhcCCCCeEEEecCCCcc-------hHHHHHHcCCCcEEE
Q 011490 107 LPLETLFKEIQPKPSCLISDVCLPW-------TVSSACKFNVPRIVF 146 (484)
Q Consensus 107 ~~l~~~l~~~~~~~D~vI~D~~~~~-------a~~~A~~lgIP~v~~ 146 (484)
+.+.+.++++..+||++++|..-.. |..+...+|+|+|-+
T Consensus 91 P~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGV 137 (225)
T 2w36_A 91 PLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGV 137 (225)
T ss_dssp HHHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEE
Confidence 4455556665578999999995432 445666679999975
No 140
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=33.81 E-value=43 Score=27.41 Aligned_cols=36 Identities=22% Similarity=0.377 Sum_probs=29.1
Q ss_pred cEEEEEcCCCCC-----CHHHHHHHHHHHHHCCCeEEEEeCCC
Q 011490 9 LHFILFPFLAQG-----HMIPMIDIARLLAQHGALVTIVTTPM 46 (484)
Q Consensus 9 ~kil~~~~~~~G-----Hv~P~l~La~~L~~rGh~V~~~~~~~ 46 (484)
.+|+++|. +| --++.-.|++.|.++|.+|.|..+|-
T Consensus 24 ~~ViIvPG--YGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 24 SKVIIVPG--YGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp SEEEEEEC--HHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECC--hHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 46777764 33 34688999999999999999999983
No 141
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=33.70 E-value=25 Score=33.32 Aligned_cols=29 Identities=31% Similarity=0.297 Sum_probs=24.4
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEE
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIV 42 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~ 42 (484)
|||+|+=.+-.| +.+|..|+++||+|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 688888766444 88999999999999998
No 142
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=33.57 E-value=86 Score=27.60 Aligned_cols=33 Identities=9% Similarity=-0.047 Sum_probs=25.5
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
-|+++++-++.| + -.++|+.|+++|++|.++..
T Consensus 11 ~k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 11 NKVIVIAGGIKN-L--GALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp TCEEEEETCSSH-H--HHHHHHHHTTSSCEEEEEES
T ss_pred CCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEec
Confidence 368888866554 3 57889999999999998754
No 143
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=33.47 E-value=48 Score=29.65 Aligned_cols=41 Identities=20% Similarity=0.199 Sum_probs=31.2
Q ss_pred hHHHHHHHHhcCCCCeEEEecCCCc------chHHHHHHcCCCcEEEec
Q 011490 106 RLPLETLFKEIQPKPSCLISDVCLP------WTVSSACKFNVPRIVFHG 148 (484)
Q Consensus 106 ~~~l~~~l~~~~~~~D~vI~D~~~~------~a~~~A~~lgIP~v~~~~ 148 (484)
...+.+++++ .+||+||+..... -+..+|..||+|+++...
T Consensus 101 a~~La~~i~~--~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 101 GRILTEVIKK--EAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHHHH--HCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHh--cCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 3455666776 5899999877442 578999999999998654
No 144
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=33.27 E-value=44 Score=27.44 Aligned_cols=36 Identities=25% Similarity=0.472 Sum_probs=28.9
Q ss_pred cEEEEEcCCCCC-----CHHHHHHHHHHHHHCCCeEEEEeCCC
Q 011490 9 LHFILFPFLAQG-----HMIPMIDIARLLAQHGALVTIVTTPM 46 (484)
Q Consensus 9 ~kil~~~~~~~G-----Hv~P~l~La~~L~~rGh~V~~~~~~~ 46 (484)
.+|+++|. +| --++.-.|++.|.++|.+|.|..+|-
T Consensus 23 ~~ViIvPG--YGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 23 NSIIITPG--YGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp SEEEEEEC--HHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECC--hHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 36777764 33 34689999999999999999999983
No 145
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=33.11 E-value=1.6e+02 Score=23.95 Aligned_cols=90 Identities=14% Similarity=0.095 Sum_probs=48.9
Q ss_pred HHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCCccCCCCccchHHHHHHHHHH
Q 011490 25 MIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESWDKLPSMALLPKFFAAIEM 104 (484)
Q Consensus 25 ~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (484)
...+-+.|+++|+.+.++|.......+...++...... -+....+. . . ..
T Consensus 73 ~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~-~f~~~~~~--------~----------~-~k---------- 122 (187)
T 2wm8_A 73 VPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFR-YFVHREIY--------P----------G-SK---------- 122 (187)
T ss_dssp HHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTT-TEEEEEES--------S----------S-CH----------
T ss_pred HHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHh-hcceeEEE--------e----------C-ch----------
Confidence 56778889999999999997653333444433221111 12222110 0 0 00
Q ss_pred chHHHHHHHHhcCCCCe--EEEecCCCcchHHHHHHcCCCcEEEe
Q 011490 105 LRLPLETLFKEIQPKPS--CLISDVCLPWTVSSACKFNVPRIVFH 147 (484)
Q Consensus 105 ~~~~l~~~l~~~~~~~D--~vI~D~~~~~a~~~A~~lgIP~v~~~ 147 (484)
...+..+++..+..++ ++|-|. ..-...|+..|++++.+.
T Consensus 123 -~~~~~~~~~~~~~~~~~~~~igD~--~~Di~~a~~aG~~~i~v~ 164 (187)
T 2wm8_A 123 -ITHFERLQQKTGIPFSQMIFFDDE--RRNIVDVSKLGVTCIHIQ 164 (187)
T ss_dssp -HHHHHHHHHHHCCCGGGEEEEESC--HHHHHHHHTTTCEEEECS
T ss_pred -HHHHHHHHHHcCCChHHEEEEeCC--ccChHHHHHcCCEEEEEC
Confidence 0123444454334443 555666 456778999999998754
No 146
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=33.04 E-value=2.1e+02 Score=23.62 Aligned_cols=140 Identities=14% Similarity=0.102 Sum_probs=73.1
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCcc
Q 011490 281 AVYVCLGSLCDSSTRQLIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIG 360 (484)
Q Consensus 281 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~ 360 (484)
.|-|-+||.+ +....++....++..+.++=..+-+-+. .|+.+.+. +-... -...++
T Consensus 9 ~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~SaHR--------~p~~~~~~-----------~~~a~-~~g~~V- 65 (174)
T 3lp6_A 9 RVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSAHR--------TPEAMFSY-----------ARGAA-ARGLEV- 65 (174)
T ss_dssp SEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------CHHHHHHH-----------HHHHH-HHTCCE-
T ss_pred eEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECCCC--------CHHHHHHH-----------HHHHH-hCCCCE-
Confidence 4666677755 4566778888888888887655544322 44433221 00000 011233
Q ss_pred ccccccchh----hHHHHHHcCCCEeccccccchh-hHHHHH--HH-HhcceeEe-ccCCCCCCcccccCCCccCHHHHH
Q 011490 361 GFLTHCGWN----SVLEAVSNGLPMVTWPFFADQF-CNEKLV--VQ-VLRIGVTI-GAERPPSLADEERNGVPVKKEDVK 431 (484)
Q Consensus 361 ~~I~HgG~~----s~~eal~~GvP~l~~P~~~DQ~-~na~~~--~e-~~G~g~~l-~~~~~~~~~~~~~~~~~~~~~~l~ 431 (484)
+|.=.|.. ++..+ ..-+|+|.+|...... .....+ .+ -.|+.+.. ..+ +..++.-++
T Consensus 66 -iIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~------------~~~nAa~lA 131 (174)
T 3lp6_A 66 -IIAGAGGAAHLPGMVAA-ATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIG------------GAGNAGLLA 131 (174)
T ss_dssp -EEEEEESSCCHHHHHHH-HCSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTT------------CHHHHHHHH
T ss_pred -EEEecCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcC------------cchHHHHHH
Confidence 66655543 34433 3668999999853221 111111 10 12322222 111 135666666
Q ss_pred HHHHHHhcCChhHHHHHHHHHHHHHHHHHHH
Q 011490 432 KAINMLMDEGEERDERRRRAREYGETAKTAI 462 (484)
Q Consensus 432 ~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~ 462 (484)
..|-.+ .|+ .++++.+.+++++++.+
T Consensus 132 a~Il~~-~d~----~l~~kl~~~r~~~~~~v 157 (174)
T 3lp6_A 132 VRMLGA-ANP----QLRARIVAFQDRLADVV 157 (174)
T ss_dssp HHHHHT-TCH----HHHHHHHHHHHHHHHHH
T ss_pred HHHHhC-CCH----HHHHHHHHHHHHHHHHH
Confidence 655433 456 78888888888777654
No 147
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=32.88 E-value=51 Score=30.64 Aligned_cols=74 Identities=16% Similarity=0.169 Sum_probs=52.8
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhH
Q 011490 292 SSTRQLIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSV 371 (484)
Q Consensus 292 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~ 371 (484)
.+.+....+.+++.....+.||.+.++... .++.++++...+-.+|.. ||=..-...+
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~--------------------~rlL~~lD~~~i~~~PK~--~~GySDiTaL 119 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGYNS--------------------NGLLKYLDYDLIRENPKF--FCGYSDITAL 119 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSCG--------------------GGGGGGCCHHHHHTSCCE--EEECGGGHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccccH--------------------HHHHhhcChhHHHhCCeE--EEEecchHHH
Confidence 345667779999999999999999887532 234466666666667777 7777777777
Q ss_pred HHHHH--cCCCEeccccc
Q 011490 372 LEAVS--NGLPMVTWPFF 387 (484)
Q Consensus 372 ~eal~--~GvP~l~~P~~ 387 (484)
+-+++ .|++.+-=|..
T Consensus 120 ~~al~~~~G~~t~hGp~~ 137 (331)
T 4e5s_A 120 NNAIYTKTGLVTYSGPHF 137 (331)
T ss_dssp HHHHHHHHCBCEEECCCG
T ss_pred HHHHHHhhCCcEEEccch
Confidence 77776 47777776653
No 148
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=32.60 E-value=26 Score=30.54 Aligned_cols=37 Identities=8% Similarity=0.052 Sum_probs=31.9
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|||+|..-|+-|=..=...||..|+++|++|.++=..
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D 37 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGD 37 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEEC
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4788877778889999999999999999999999543
No 149
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=32.57 E-value=55 Score=25.65 Aligned_cols=42 Identities=12% Similarity=0.226 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCCeEEEecCCCc--chHHHHHHc-------CCCcEEEecch
Q 011490 107 LPLETLFKEIQPKPSCLISDVCLP--WTVSSACKF-------NVPRIVFHGFS 150 (484)
Q Consensus 107 ~~l~~~l~~~~~~~D~vI~D~~~~--~a~~~A~~l-------gIP~v~~~~~~ 150 (484)
..-.+.+++ .+||+||.|..++ -+..+++.+ .+|.+.++...
T Consensus 47 ~~al~~~~~--~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 47 LTALPMLKK--GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HHHHHHHHH--HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred HHHHHHHHh--CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
No 150
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=32.56 E-value=27 Score=32.59 Aligned_cols=32 Identities=19% Similarity=0.161 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
++||+++-.|..| ..+|..|+++||+|+++..
T Consensus 4 ~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 4 SKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 5789999766555 3578889999999998854
No 151
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=32.37 E-value=1.4e+02 Score=26.44 Aligned_cols=32 Identities=19% Similarity=0.017 Sum_probs=24.4
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
|+++++-.+. -+ -.++|+.|+++|++|.++..
T Consensus 16 k~~lVTGas~-gI--G~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 16 RVAFITGAAR-GQ--GRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp CEEEEESTTS-HH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCc-HH--HHHHHHHHHHCCCEEEEEec
Confidence 6788875554 33 46889999999999998853
No 152
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=32.36 E-value=50 Score=30.19 Aligned_cols=38 Identities=5% Similarity=-0.178 Sum_probs=29.5
Q ss_pred CcEEEEEcCCCCC-C---HHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 8 QLHFILFPFLAQG-H---MIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 8 ~~kil~~~~~~~G-H---v~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
++||+++..+..+ | +.....++++|.++||+|..+.+.
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5689988866333 2 457789999999999999999743
No 153
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=32.22 E-value=51 Score=29.45 Aligned_cols=38 Identities=21% Similarity=0.240 Sum_probs=32.5
Q ss_pred CcEEEEEcCC---CCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 8 QLHFILFPFL---AQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 8 ~~kil~~~~~---~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
++|.+|++-+ +.|-=.-.-.||..|++||+.|+..--.
T Consensus 22 ~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~D 62 (295)
T 2vo1_A 22 SMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKID 62 (295)
T ss_dssp CCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecc
Confidence 6899999987 5677778889999999999999998543
No 154
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=32.16 E-value=52 Score=28.73 Aligned_cols=40 Identities=10% Similarity=0.071 Sum_probs=28.0
Q ss_pred HHHHHHHHhcCCCCeEEEecCCC-------cchHHHHHHcCCCcEEE
Q 011490 107 LPLETLFKEIQPKPSCLISDVCL-------PWTVSSACKFNVPRIVF 146 (484)
Q Consensus 107 ~~l~~~l~~~~~~~D~vI~D~~~-------~~a~~~A~~lgIP~v~~ 146 (484)
+.+.++++++..+||++++|..- --|..+.-.+|+|+|-+
T Consensus 95 P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 141 (237)
T 3goc_A 95 PTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGV 141 (237)
T ss_dssp HHHHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEee
Confidence 44455556555789999999842 23556777788999864
No 155
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=32.01 E-value=53 Score=29.21 Aligned_cols=41 Identities=15% Similarity=0.020 Sum_probs=30.7
Q ss_pred hHHHHHHHHhcCCCCeEEEecCCCc------chHHHHHHcCCCcEEEec
Q 011490 106 RLPLETLFKEIQPKPSCLISDVCLP------WTVSSACKFNVPRIVFHG 148 (484)
Q Consensus 106 ~~~l~~~l~~~~~~~D~vI~D~~~~------~a~~~A~~lgIP~v~~~~ 148 (484)
...+.+++++ .+||+||+..... -+..+|..||+|+++...
T Consensus 105 A~~La~~i~~--~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~ 151 (255)
T 1efv_B 105 ARVLAKLAEK--EKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 151 (255)
T ss_dssp HHHHHHHHHH--HTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHh--cCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceE
Confidence 3455666666 5799999877442 578999999999998644
No 156
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=31.97 E-value=54 Score=28.14 Aligned_cols=33 Identities=24% Similarity=0.194 Sum_probs=23.7
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|.++++ |+.|-+ -..+++.|+++||+|+++...
T Consensus 6 k~vlVt-Gasggi--G~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 6 GAVLIT-GASRGI--GEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp CEEEES-STTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE-CCCcHH--HHHHHHHHHHCCCEEEEEECC
Confidence 355666 444544 467899999999999988653
No 157
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=31.83 E-value=75 Score=30.97 Aligned_cols=148 Identities=14% Similarity=0.042 Sum_probs=71.3
Q ss_pred CcEEEEecCCCccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCC
Q 011490 279 GSAVYVCLGSLCDSSTRQLIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPA 358 (484)
Q Consensus 279 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~ 358 (484)
++++.|+.|..+ ...++.|.+.|..+.+..... .+.+.......++.+..---+...|..++
T Consensus 13 ~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~~-----------~~~~~~l~~~~~i~~~~~~~~~~~l~~~~ 74 (457)
T 1pjq_A 13 RDCLIVGGGDVA-------ERKARLLLEAGARLTVNALTF-----------IPQFTVWANEGMLTLVEGPFDETLLDSCW 74 (457)
T ss_dssp CEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESSC-----------CHHHHHHHTTTSCEEEESSCCGGGGTTCS
T ss_pred CEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCCC-----------CHHHHHHHhcCCEEEEECCCCccccCCcc
Confidence 458888888644 334555666788777665421 11222222233443322222233455666
Q ss_pred ccccccccchhh-----HHHHHHcCCCE--eccccccchhhHHHHHH-HHhcceeEeccCCCCCCcccccCCCccCHHHH
Q 011490 359 IGGFLTHCGWNS-----VLEAVSNGLPM--VTWPFFADQFCNEKLVV-QVLRIGVTIGAERPPSLADEERNGVPVKKEDV 430 (484)
Q Consensus 359 ~~~~I~HgG~~s-----~~eal~~GvP~--l~~P~~~DQ~~na~~~~-e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l 430 (484)
+ +|.--|.-. ..+|-..|+|+ +--|-..|...-+ .+. ...-+|+.=+.+ ...-+..|
T Consensus 75 l--Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa-~~~~~~l~iaIsT~Gk------------sp~la~~i 139 (457)
T 1pjq_A 75 L--AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPS-IIDRSPLMVAVSSGGT------------SPVLARLL 139 (457)
T ss_dssp E--EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCE-EEEETTEEEEEECTTS------------CHHHHHHH
T ss_pred E--EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeee-EEEeCCeEEEEECCCC------------ChHHHHHH
Confidence 6 777777543 34556678886 2223222221100 000 122344442211 12235778
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHHHHHHHHH
Q 011490 431 KKAINMLMDEGEERDERRRRAREYGETAKTA 461 (484)
Q Consensus 431 ~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~ 461 (484)
++.|...+.+ ....+-+.+.++++++++.
T Consensus 140 r~~ie~~l~~--~~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 140 REKLESLLPQ--HLGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp HHHHHHHSCT--THHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcch--hHHHHHHHHHHHHHHHHhh
Confidence 8888888742 2224445555555555543
No 158
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=31.74 E-value=39 Score=33.02 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=27.5
Q ss_pred HHHHHHHhcCCCCeEEEecCCCcchHHHHHHcCCCcEEE
Q 011490 108 PLETLFKEIQPKPSCLISDVCLPWTVSSACKFNVPRIVF 146 (484)
Q Consensus 108 ~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~v~~ 146 (484)
.+++++++ .+||++|.+.. ...+|+++|||++.+
T Consensus 366 ~le~~i~~--~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARA--GQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHH--HTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHHh--cCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 35677777 79999999865 456899999999974
No 159
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=31.72 E-value=1.5e+02 Score=28.61 Aligned_cols=31 Identities=13% Similarity=0.136 Sum_probs=23.5
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
||+++-. | ...+.+++++++.|++|+++.+.
T Consensus 3 ~ilI~g~---g--~~~~~i~~a~~~~G~~vv~v~~~ 33 (451)
T 2vpq_A 3 KVLIANR---G--EIAVRIIRACRDLGIQTVAIYSE 33 (451)
T ss_dssp EEEECCC---H--HHHHHHHHHHHHTTCEEEEEEEG
T ss_pred eEEEeCC---C--HHHHHHHHHHHHcCCEEEEEecc
Confidence 5776642 3 35678999999999999988653
No 160
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=31.64 E-value=57 Score=28.77 Aligned_cols=33 Identities=21% Similarity=0.201 Sum_probs=24.5
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|+++++-++. -+ -..+|++|+++|++|.++...
T Consensus 30 k~vlITGas~-gI--G~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 30 QVAVVTGASR-GI--GAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp CEEEESSTTS-HH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCC-hH--HHHHHHHHHHCCCEEEEEECC
Confidence 6777775543 33 467899999999999887643
No 161
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=31.58 E-value=65 Score=30.18 Aligned_cols=27 Identities=33% Similarity=0.494 Sum_probs=21.7
Q ss_pred CCCccccccccchhhH---HHHHHcCCCEecc
Q 011490 356 HPAIGGFLTHCGWNSV---LEAVSNGLPMVTW 384 (484)
Q Consensus 356 ~~~~~~~I~HgG~~s~---~eal~~GvP~l~~ 384 (484)
+|++ +|++||.-+. ..|-..|+|.++.
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 7888 9999998664 5677889999863
No 162
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=31.55 E-value=1.6e+02 Score=25.22 Aligned_cols=113 Identities=9% Similarity=0.002 Sum_probs=0.0
Q ss_pred CCCCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCC
Q 011490 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLP 80 (484)
Q Consensus 1 m~~~~~~~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~ 80 (484)
|...+. ||+++.++.-..+..++.-.+.= .+++|..+.+........+..+.. ++.+..++
T Consensus 1 ~~~~~~---riavl~SG~Gsnl~all~~~~~~--~~~eI~~Vis~~~~a~~~~~A~~~-----gIp~~~~~--------- 61 (215)
T 3tqr_A 1 MNREPL---PIVVLISGNGTNLQAIIGAIQKG--LAIEIRAVISNRADAYGLKRAQQA-----DIPTHIIP--------- 61 (215)
T ss_dssp ---CCE---EEEEEESSCCHHHHHHHHHHHTT--CSEEEEEEEESCTTCHHHHHHHHT-----TCCEEECC---------
T ss_pred CCCCCc---EEEEEEeCCcHHHHHHHHHHHcC--CCCEEEEEEeCCcchHHHHHHHHc-----CCCEEEeC---------
Q ss_pred CCCCccCCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-cchHHHHHHcCCCcEEEecc
Q 011490 81 EGCESWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCL-PWTVSSACKFNVPRIVFHGF 149 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~v~~~~~ 149 (484)
..-+..-....+.+.+.+++ .++|++|+-.+. .-...+-....-.++-++++
T Consensus 62 ---------------~~~~~~r~~~d~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 62 ---------------HEEFPSRTDFESTLQKTIDH--YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp ---------------GGGSSSHHHHHHHHHHHHHT--TCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ---------------ccccCchhHhHHHHHHHHHh--cCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
No 163
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=31.40 E-value=38 Score=27.47 Aligned_cols=36 Identities=17% Similarity=0.178 Sum_probs=29.3
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~ 46 (484)
..+++|++.++ | +.|++.+++.|.++|.+|+++ ...
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r 58 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVT 58 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EEC
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 34788888665 3 999999999999999999998 543
No 164
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=31.38 E-value=42 Score=30.75 Aligned_cols=32 Identities=6% Similarity=0.093 Sum_probs=26.7
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
++||+++..+ ....++++++++||+|.++.+.
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECC
Confidence 3689998876 5678999999999999988765
No 165
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=31.37 E-value=27 Score=27.38 Aligned_cols=31 Identities=19% Similarity=0.245 Sum_probs=24.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
.||+++-. |.+ -..+|+.|.++||+|+++..
T Consensus 7 ~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~ 37 (141)
T 3llv_A 7 YEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDK 37 (141)
T ss_dssp CSEEEECC---SHH--HHHHHHHHHHTTCCEEEEES
T ss_pred CEEEEECC---CHH--HHHHHHHHHHCCCeEEEEEC
Confidence 46888754 553 46799999999999999865
No 166
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=31.29 E-value=62 Score=27.22 Aligned_cols=37 Identities=14% Similarity=0.012 Sum_probs=30.3
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
+..++++.++..|+-.-+..+++.|+++|+.|..+-.
T Consensus 27 ~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 27 PAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 3457777778888888899999999999999887653
No 167
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=31.24 E-value=1.6e+02 Score=26.14 Aligned_cols=33 Identities=21% Similarity=0.133 Sum_probs=24.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
.|+++++-++. -+ -.++|+.|+++|++|.++..
T Consensus 29 ~k~~lVTGas~-GI--G~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 29 RPVAIVTGGRR-GI--GLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCEEEEETTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEecCCC-HH--HHHHHHHHHHCCCeEEEEeC
Confidence 36788875544 23 46889999999999998863
No 168
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=31.17 E-value=2.3e+02 Score=23.51 Aligned_cols=145 Identities=15% Similarity=0.117 Sum_probs=75.9
Q ss_pred CcEEEEecCCCccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHH---HHhcCCCeEeeCcCChhhhcC
Q 011490 279 GSAVYVCLGSLCDSSTRQLIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFE---ERIEGRGLLIRGWAPQVVILS 355 (484)
Q Consensus 279 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~---~~~~~~nv~~~~~~pq~~ll~ 355 (484)
+|.|-|-+||.. +....++..+.|+..+..+-..+-+-.. .|+.+. +.....++.
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SAHR--------tp~~l~~~~~~a~~~g~~------------ 79 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHR--------TPDYMFEYAETARERGLK------------ 79 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------SHHHHHHHHHHTTTTTCC------------
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcccc--------ChHHHHHHHHHHHhcCce------------
Confidence 456888889876 5567788889999999887665544332 344322 221222222
Q ss_pred CCCccccccccchh----hHHHHHHcCCCEeccccccch---hhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHH
Q 011490 356 HPAIGGFLTHCGWN----SVLEAVSNGLPMVTWPFFADQ---FCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKE 428 (484)
Q Consensus 356 ~~~~~~~I~HgG~~----s~~eal~~GvP~l~~P~~~DQ---~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~ 428 (484)
+ +|.=.|.- ++. |-..-+|+|.+|..... .+.-.-+. +.=-|+.+-.-. +. +.+..++.
T Consensus 80 ---V--iIa~AG~aahLpGvv-Aa~T~~PVIGVPv~s~~l~G~DsLlSiv-QMP~GvpVaTva-----ig--~~ga~NAa 145 (181)
T 4b4k_A 80 ---V--IIAGAGGAAHLPGMV-AAKTNLPVIGVPVQSKALNGLDSLLSIV-QMPGGVPVATVA-----IG--KAGSTNAG 145 (181)
T ss_dssp ---E--EEEEECSSCCHHHHH-HTTCCSCEEEEECCCTTTTTHHHHHHHH-TCCTTCCCEECC-----SS--HHHHHHHH
T ss_pred ---E--EEEeccccccchhhH-HhcCCCCEEEEecCCCCccchhhHHHHH-hCCCCCceEEEe-----cC--CccHHHHH
Confidence 2 66555533 333 33456899999986532 22222222 222333222110 00 00112333
Q ss_pred HHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHhh
Q 011490 429 DVKKAINMLMDEGEERDERRRRAREYGETAKTAIEE 464 (484)
Q Consensus 429 ~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~ 464 (484)
-++..|- -+.|+ +++++.+.+++.+++.+.+
T Consensus 146 llA~qIL-a~~d~----~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 146 LLAAQIL-GSFHD----DIHDALELRREAIEKDVRE 176 (181)
T ss_dssp HHHHHHH-TTTCH----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-ccCCH----HHHHHHHHHHHHHHHHHHH
Confidence 3444332 23455 7888888888887766544
No 169
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=30.96 E-value=26 Score=32.12 Aligned_cols=32 Identities=22% Similarity=0.295 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
.+||.|+-.+..| ..+|+.|+++||+|+++..
T Consensus 9 ~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 9 EFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp SCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 5789999766655 3689999999999998743
No 170
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=30.93 E-value=50 Score=26.13 Aligned_cols=35 Identities=14% Similarity=0.132 Sum_probs=29.3
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~ 46 (484)
.++++++-++ =+.|++.+++.|.++|.+|+++ ...
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R 53 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVT 53 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEE
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 4788888665 4999999999999999999998 543
No 171
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=30.92 E-value=1.5e+02 Score=29.91 Aligned_cols=30 Identities=20% Similarity=0.398 Sum_probs=24.2
Q ss_pred CCCCccccccccch------hhHHHHHHcCCCEecccc
Q 011490 355 SHPAIGGFLTHCGW------NSVLEAVSNGLPMVTWPF 386 (484)
Q Consensus 355 ~~~~~~~~I~HgG~------~s~~eal~~GvP~l~~P~ 386 (484)
.++.+ +++|.|- ++++||-+.++|+|++--
T Consensus 74 g~p~v--~~~TsGpG~~N~~~gv~~A~~~~vPll~itg 109 (590)
T 1ybh_A 74 GKPGI--CIATSGPGATNLVSGLADALLDSVPLVAITG 109 (590)
T ss_dssp SSCEE--EEECTTHHHHTTHHHHHHHHHHTCCEEEEEE
T ss_pred CCCEE--EEeccCchHHHHHHHHHHHHhhCCCEEEEeC
Confidence 45666 8889885 488899999999999853
No 172
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=30.78 E-value=50 Score=27.69 Aligned_cols=36 Identities=22% Similarity=0.377 Sum_probs=28.7
Q ss_pred cEEEEEcCCCCC-----CHHHHHHHHHHHHHCCCeEEEEeCCC
Q 011490 9 LHFILFPFLAQG-----HMIPMIDIARLLAQHGALVTIVTTPM 46 (484)
Q Consensus 9 ~kil~~~~~~~G-----Hv~P~l~La~~L~~rGh~V~~~~~~~ 46 (484)
.+|+++|. || --++.-.|++.|.++|.+|.|..+|-
T Consensus 47 ~~ViIVPG--YGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 47 SKVIIVPG--YGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp SEEEEEEC--HHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcEEEEcC--chHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 36777764 33 24688999999999999999999983
No 173
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=30.71 E-value=81 Score=27.72 Aligned_cols=37 Identities=14% Similarity=0.188 Sum_probs=27.4
Q ss_pred cEEEEEcCCCCCC-----------HHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQGH-----------MIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~GH-----------v~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
+||+|+.....+. ..=++.--..|++.|++|+++++.
T Consensus 4 ~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 4 KRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp CEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3788888764322 245677778888999999999865
No 174
>2lse_A Four helix bundle protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=36.89 E-value=10 Score=25.94 Aligned_cols=38 Identities=26% Similarity=0.330 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHhhcC
Q 011490 446 ERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQQAK 484 (484)
Q Consensus 446 ~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~ 484 (484)
+.|++..+++.-.++.+++|. ...-+++|-+.+++|+|
T Consensus 26 earerieklakdvkdeleegd-aknmiekfrdemeqmyk 63 (101)
T 2lse_A 26 EARERIEKLAKDVKDELEEGD-AKNMIEKFRDEMEQMYK 63 (101)
Confidence 567777777777777655554 45667777777776654
No 175
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=30.61 E-value=59 Score=28.67 Aligned_cols=39 Identities=18% Similarity=0.234 Sum_probs=28.1
Q ss_pred CCCCCCCCcEEEEEcCCC--CCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 1 MASQAGSQLHFILFPFLA--QGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 1 m~~~~~~~~kil~~~~~~--~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|-+..+ |+++++-.+ .| + -.++|+.|+++|++|.+..-.
T Consensus 1 M~~l~g---K~alVTGaa~~~G-I--G~aiA~~la~~Ga~Vvi~~r~ 41 (256)
T 4fs3_A 1 MLNLEN---KTYVIMGIANKRS-I--AFGVAKVLDQLGAKLVFTYRK 41 (256)
T ss_dssp CCCCTT---CEEEEECCCSTTC-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CcCCCC---CEEEEECCCCCch-H--HHHHHHHHHHCCCEEEEEECC
Confidence 445555 788888633 23 2 478999999999999988653
No 176
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=30.54 E-value=2.3e+02 Score=23.47 Aligned_cols=140 Identities=12% Similarity=0.114 Sum_probs=77.2
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHh---cCCCeEeeCcCChhhhcCCC
Q 011490 281 AVYVCLGSLCDSSTRQLIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERI---EGRGLLIRGWAPQVVILSHP 357 (484)
Q Consensus 281 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~---~~~nv~~~~~~pq~~ll~~~ 357 (484)
.|-|-+||.. +....++....++..+..+=..+-+-+. .|+.+.+.. ...+ .
T Consensus 23 ~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR--------~p~~l~~~~~~a~~~g---------------~ 77 (182)
T 1u11_A 23 VVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSAHR--------TPDRLADYARTAAERG---------------L 77 (182)
T ss_dssp SEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------CHHHHHHHHHHTTTTT---------------C
T ss_pred EEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcccC--------CHHHHHHHHHHHHhCC---------------C
Confidence 4666677755 5567778888888888887655544322 444332211 1111 2
Q ss_pred Cccccccccchh----hHHHHHHcCCCEeccccccc--hhhHH-HHHHHH--hcceeEe-ccCCCCCCcccccCCCccCH
Q 011490 358 AIGGFLTHCGWN----SVLEAVSNGLPMVTWPFFAD--QFCNE-KLVVQV--LRIGVTI-GAERPPSLADEERNGVPVKK 427 (484)
Q Consensus 358 ~~~~~I~HgG~~----s~~eal~~GvP~l~~P~~~D--Q~~na-~~~~e~--~G~g~~l-~~~~~~~~~~~~~~~~~~~~ 427 (484)
++ +|.=.|.. ++..++ .-+|+|.+|.... .-..+ .-+. . .|+.+.. ..++ .+..++
T Consensus 78 ~V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSiv-qmP~GvpVatV~I~~----------a~~~nA 143 (182)
T 1u11_A 78 NV--IIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIV-QMPGGVPVGTLAIGA----------SGAKNA 143 (182)
T ss_dssp CE--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHH-CCCTTSCCEECCSSH----------HHHHHH
T ss_pred cE--EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCceEEEecCC----------ccchHH
Confidence 33 66665543 444443 5799999998542 11111 1122 3 4555321 1110 012556
Q ss_pred HHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHhh
Q 011490 428 EDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEE 464 (484)
Q Consensus 428 ~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~ 464 (484)
.-++..|- -+.|+ .++++.+.+++.+++.+.+
T Consensus 144 allAaqIl-a~~d~----~l~~kL~~~r~~~~~~v~~ 175 (182)
T 1u11_A 144 ALLAASIL-ALYNP----ALAARLETWRALQTASVPN 175 (182)
T ss_dssp HHHHHHHH-GGGCH----HHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHH-ccCCH----HHHHHHHHHHHHHHHHHHH
Confidence 66665554 34566 8889999998888866544
No 177
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=30.54 E-value=3.1e+02 Score=24.90 Aligned_cols=110 Identities=11% Similarity=0.030 Sum_probs=59.2
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHhC-CCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCc
Q 011490 281 AVYVCLGSLCDSSTRQLIELGLGLEAT-KKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAI 359 (484)
Q Consensus 281 ~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~ 359 (484)
+.+|++|.++. ..+.++.+. +..++.+...+.. -...+.++...+ .-+-...+++..+++
T Consensus 8 igiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~~--------~~~~~~~~~~~~----~~~~~~~~ll~~~~~ 68 (330)
T 3e9m_A 8 YGIMSTAQIVP-------RFVAGLRESAQAEVRGIASRRLE--------NAQKMAKELAIP----VAYGSYEELCKDETI 68 (330)
T ss_dssp EEECSCCTTHH-------HHHHHHHHSSSEEEEEEBCSSSH--------HHHHHHHHTTCC----CCBSSHHHHHHCTTC
T ss_pred EEEECchHHHH-------HHHHHHHhCCCcEEEEEEeCCHH--------HHHHHHHHcCCC----ceeCCHHHHhcCCCC
Confidence 77888888763 345666654 4555545443311 112222222111 234456778875555
Q ss_pred cccccccchh----hHHHHHHcCCCEec-ccccc--chhh-HHHHHHHHhcceeEeccC
Q 011490 360 GGFLTHCGWN----SVLEAVSNGLPMVT-WPFFA--DQFC-NEKLVVQVLRIGVTIGAE 410 (484)
Q Consensus 360 ~~~I~HgG~~----s~~eal~~GvP~l~-~P~~~--DQ~~-na~~~~e~~G~g~~l~~~ 410 (484)
.+++--.-.. -+.+|+.+|+++++ -|+.. ++-. ....+ ++.|+-+.+...
T Consensus 69 D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a-~~~g~~~~v~~~ 126 (330)
T 3e9m_A 69 DIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIA-QEQGVFLMEAQK 126 (330)
T ss_dssp SEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHH-HHTTCCEEECCS
T ss_pred CEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHH-HHcCCeEEEEEh
Confidence 4466433333 36788999999886 35443 3322 33334 577776666544
No 178
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=30.40 E-value=59 Score=28.07 Aligned_cols=45 Identities=13% Similarity=-0.015 Sum_probs=33.9
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHH-HHCCCeEEEEeCCCchhhhhHH
Q 011490 10 HFILFPFLAQGHMIPMIDIARLL-AQHGALVTIVTTPMNAARFQNV 54 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L-~~rGh~V~~~~~~~~~~~v~~~ 54 (484)
=+++...|+.|-..=++.+|... .+.|..|.+++.+...+.+...
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~~~~ 77 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDLRRE 77 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHHHHH
Confidence 46777788999999999988764 4558889999887665554443
No 179
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=30.23 E-value=39 Score=31.09 Aligned_cols=30 Identities=20% Similarity=0.244 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEE
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIV 42 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~ 42 (484)
++||+++-.|+.| ..+|..|++.||+|+++
T Consensus 19 ~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 19 GMKVAIMGAGAVG-----CYYGGMLARAGHEVILI 48 (318)
T ss_dssp -CEEEEESCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CCcEEEECcCHHH-----HHHHHHHHHCCCeEEEE
Confidence 5789999887776 56789999999999999
No 180
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=30.07 E-value=66 Score=29.37 Aligned_cols=36 Identities=11% Similarity=0.120 Sum_probs=26.1
Q ss_pred HHHHHHhcCCCCeEEEecCCCcchHHHHHHcCCCcEEEecch
Q 011490 109 LETLFKEIQPKPSCLISDVCLPWTVSSACKFNVPRIVFHGFS 150 (484)
Q Consensus 109 l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~v~~~~~~ 150 (484)
+..+++ +.|++|+--. +...+|..+|+|+|.++...
T Consensus 247 l~ali~----~a~l~I~~DS--G~~HlAaa~g~P~v~lfg~t 282 (326)
T 2gt1_A 247 VARVLA----GAKFVVSVDT--GLSHLTAALDRPNITVYGPT 282 (326)
T ss_dssp HHHHHH----TCSEEEEESS--HHHHHHHHTTCCEEEEESSS
T ss_pred HHHHHH----hCCEEEecCC--cHHHHHHHcCCCEEEEECCC
Confidence 345554 5899996654 56778888999999986543
No 181
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=30.03 E-value=52 Score=27.67 Aligned_cols=36 Identities=25% Similarity=0.467 Sum_probs=28.8
Q ss_pred cEEEEEcCCCCC-----CHHHHHHHHHHHHHCCCeEEEEeCCC
Q 011490 9 LHFILFPFLAQG-----HMIPMIDIARLLAQHGALVTIVTTPM 46 (484)
Q Consensus 9 ~kil~~~~~~~G-----Hv~P~l~La~~L~~rGh~V~~~~~~~ 46 (484)
.+|+++|. || --++...|++.|.++|.+|.|..+|-
T Consensus 46 ~~ViIVPG--YGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 46 NSIIITPG--YGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp SEEEEEEC--HHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECC--chHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 36777764 33 34688999999999999999999983
No 182
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=29.97 E-value=2.8e+02 Score=24.18 Aligned_cols=41 Identities=5% Similarity=-0.234 Sum_probs=24.7
Q ss_pred HHchHHHHHHHHhcCCCCeEEEecCCCcch-HHHHHHcCCCcEEE
Q 011490 103 EMLRLPLETLFKEIQPKPSCLISDVCLPWT-VSSACKFNVPRIVF 146 (484)
Q Consensus 103 ~~~~~~l~~~l~~~~~~~D~vI~D~~~~~a-~~~A~~lgIP~v~~ 146 (484)
..+.+.+.++.+ .++|+||..-++..+ ..+.+.++||++-+
T Consensus 56 ~~l~~~~~~l~~---~g~d~iviaCnt~~~l~~lr~~~~iPvigi 97 (245)
T 3qvl_A 56 VGVLEQIRAGRE---QGVDGHVIASFGDPGLLAARELAQGPVIGI 97 (245)
T ss_dssp HHHHHHHHHHHH---HTCSEEEEC-CCCTTHHHHHHHCSSCEEEH
T ss_pred HHHHHHHHHHHH---CCCCEEEEeCCChhHHHHHHHHcCCCEECc
Confidence 344444544444 489998866655333 45666789998753
No 183
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=29.92 E-value=24 Score=27.79 Aligned_cols=33 Identities=15% Similarity=0.152 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
+.||+++-++..| ..+|+.|.++||+|+++...
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 3588888765443 57899999999999999754
No 184
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=29.59 E-value=52 Score=26.00 Aligned_cols=33 Identities=12% Similarity=0.086 Sum_probs=23.2
Q ss_pred EEcCCCCCCHHH--HHHHHHHHHHCCCeEEEEeCC
Q 011490 13 LFPFLAQGHMIP--MIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 13 ~~~~~~~GHv~P--~l~La~~L~~rGh~V~~~~~~ 45 (484)
+++.+-+|+... .+.+|..+...||+|.++-..
T Consensus 11 vv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~ 45 (136)
T 2hy5_B 11 LNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLD 45 (136)
T ss_dssp EECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECG
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEh
Confidence 334445665444 577799999999999888654
No 185
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=29.56 E-value=82 Score=27.33 Aligned_cols=28 Identities=7% Similarity=-0.003 Sum_probs=23.9
Q ss_pred CCCeEEEecCCCcchHHHHHHcCCCcEEEec
Q 011490 118 PKPSCLISDVCLPWTVSSACKFNVPRIVFHG 148 (484)
Q Consensus 118 ~~~D~vI~D~~~~~a~~~A~~lgIP~v~~~~ 148 (484)
.++|+||.+.. +..+|+++|+|.+.+.+
T Consensus 153 ~G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 153 NGTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp TTCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred CCCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 59999999875 47789999999999763
No 186
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=29.33 E-value=1.3e+02 Score=31.12 Aligned_cols=78 Identities=14% Similarity=0.127 Sum_probs=47.0
Q ss_pred HHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHh-cCCCeEeeCcCC----------hhhhcCCCCccccccc
Q 011490 297 LIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERI-EGRGLLIRGWAP----------QVVILSHPAIGGFLTH 365 (484)
Q Consensus 297 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~-~~~nv~~~~~~p----------q~~ll~~~~~~~~I~H 365 (484)
...+++.|++.|.+.|.-+.++.. +| +-... ..+++....-.. +..+-.++.+ +++|
T Consensus 85 a~~lv~~L~~~GV~~vFg~PG~~~--------~p--l~dal~~~~~i~~v~~~hE~~Aa~aAdGyAr~tGkpgv--v~~T 152 (677)
T 1t9b_A 85 GQIFNEMMSRQNVDTVFGYPGGAI--------LP--VYDAIHNSDKFNFVLPKHEQGAGHMAEGYARASGKPGV--VLVT 152 (677)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGG--------HH--HHHHTTTCSSSEEECCSSHHHHHHHHHHHHHHHSSCEE--EEEC
T ss_pred HHHHHHHHHHcCCCEEEEecCccH--------HH--HHHHHHhCCCCeEEEeCChHHHHHHHHHHHHHHCCCEE--EEEC
Confidence 455778888888888877755431 11 11111 122333322221 2223345666 8889
Q ss_pred cch------hhHHHHHHcCCCEecccc
Q 011490 366 CGW------NSVLEAVSNGLPMVTWPF 386 (484)
Q Consensus 366 gG~------~s~~eal~~GvP~l~~P~ 386 (484)
.|- +.++||.+.++|+|++--
T Consensus 153 sGpG~~N~~~gia~A~~d~vPllvItG 179 (677)
T 1t9b_A 153 SGPGATNVVTPMADAFADGIPMVVFTG 179 (677)
T ss_dssp STHHHHTTHHHHHHHHHHTCCEEEEEE
T ss_pred CChHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 885 588999999999999853
No 187
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=29.24 E-value=1.2e+02 Score=26.80 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=28.1
Q ss_pred EEEEEcCCCC-CCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhH
Q 011490 10 HFILFPFLAQ-GHMIPMIDIARLLAQHGALVTIVTTPMNAARFQN 53 (484)
Q Consensus 10 kil~~~~~~~-GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~ 53 (484)
|+++++-.+. +-+ -..+|+.|+++|++|+++......+.+++
T Consensus 27 k~vlVTGasg~~GI--G~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 69 (280)
T 3nrc_A 27 KKILITGLLSNKSI--AYGIAKAMHREGAELAFTYVGQFKDRVEK 69 (280)
T ss_dssp CEEEECCCCSTTCH--HHHHHHHHHHTTCEEEEEECTTCHHHHHH
T ss_pred CEEEEECCCCCCCH--HHHHHHHHHHcCCEEEEeeCchHHHHHHH
Confidence 6788876441 113 46899999999999998876543333333
No 188
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=29.18 E-value=52 Score=28.57 Aligned_cols=40 Identities=13% Similarity=0.080 Sum_probs=23.9
Q ss_pred CCCCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 1 m~~~~~~~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|+.+.+ .|.++++ ++.|-+ -..+++.|+++|++|+++.-.
T Consensus 1 M~~~~~--~k~vlVT-Gas~gI--G~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 1 MAASGE--ARRVLVY-GGRGAL--GSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp -----C--CCEEEEE-TTTSHH--HHHHHHHHHTTTCEEEEEESS
T ss_pred CCccCC--CCEEEEE-CCCcHH--HHHHHHHHHhCCCEEEEEeCC
Confidence 555433 2455666 444433 467899999999999988643
No 189
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=29.07 E-value=53 Score=29.14 Aligned_cols=40 Identities=10% Similarity=0.010 Sum_probs=30.1
Q ss_pred HHHHHHHHhcCCCCeEEEecCCC------cchHHHHHHcCCCcEEEec
Q 011490 107 LPLETLFKEIQPKPSCLISDVCL------PWTVSSACKFNVPRIVFHG 148 (484)
Q Consensus 107 ~~l~~~l~~~~~~~D~vI~D~~~------~~a~~~A~~lgIP~v~~~~ 148 (484)
..+.+++++ .+||+||+.... .-+..+|..||+|+++...
T Consensus 103 ~~La~~i~~--~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 103 KILAAVARA--EGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp HHHHHHHHH--HTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHh--cCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 445556666 579999987744 2578999999999998643
No 190
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=29.06 E-value=54 Score=24.60 Aligned_cols=27 Identities=7% Similarity=0.128 Sum_probs=22.2
Q ss_pred CCCHHHHHHHHHHHHHC-CC-eEEEEeCC
Q 011490 19 QGHMIPMIDIARLLAQH-GA-LVTIVTTP 45 (484)
Q Consensus 19 ~GHv~P~l~La~~L~~r-Gh-~V~~~~~~ 45 (484)
.......+.+|..+.+. || +|.++-..
T Consensus 15 ~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 15 SESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp CSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred cHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 45567789999999999 99 98888655
No 191
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=28.92 E-value=78 Score=24.52 Aligned_cols=33 Identities=6% Similarity=-0.094 Sum_probs=24.3
Q ss_pred EEcCCCCC--CHHHHHHHHHHHHHCCCeE-EEEeCC
Q 011490 13 LFPFLAQG--HMIPMIDIARLLAQHGALV-TIVTTP 45 (484)
Q Consensus 13 ~~~~~~~G--Hv~P~l~La~~L~~rGh~V-~~~~~~ 45 (484)
+++.+.+| .....+.+|..+.+.||+| .++-..
T Consensus 6 iv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~ 41 (130)
T 2hy5_A 6 QINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp EECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEec
Confidence 34444443 4677899999999999999 777654
No 192
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=28.75 E-value=42 Score=29.59 Aligned_cols=39 Identities=23% Similarity=0.236 Sum_probs=30.5
Q ss_pred CcEEEEEcC--CCCCCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 011490 8 QLHFILFPF--LAQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (484)
Q Consensus 8 ~~kil~~~~--~~~GHv~P~l~La~~L~~rGh~V~~~~~~~ 46 (484)
++|++.+.. |+-|-..=...||..|+++|+.|.++=...
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 346655543 467888999999999999999999995443
No 193
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=28.33 E-value=25 Score=34.91 Aligned_cols=34 Identities=9% Similarity=0.085 Sum_probs=28.0
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~ 46 (484)
|+|||++=.+..| +.+|+.|+++|++||++....
T Consensus 42 KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 42 KPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 7899999876554 678999999999999997654
No 194
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=28.11 E-value=40 Score=29.49 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=28.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
++||.|+-.|..|- .||+.|+++||+|+.+..+
T Consensus 6 ~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 68999999998885 5899999999999987653
No 195
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=28.02 E-value=18 Score=37.92 Aligned_cols=117 Identities=10% Similarity=0.101 Sum_probs=77.1
Q ss_pred eeCcCChhhhcCCCCccccccccchhhHHHHHHcCCCEeccccccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCC
Q 011490 344 IRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGV 423 (484)
Q Consensus 344 ~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~ 423 (484)
+.++.+-.++|..+++ +||=- .+.+.|.+..++|+|....-.|+.... .. |...+..+ +.+. ..
T Consensus 603 ~~~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~-----~r--g~y~d~~~---~~pg---~~ 666 (729)
T 3l7i_A 603 VSNYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG-----LR--GFYMNYME---DLPG---PI 666 (729)
T ss_dssp CTTCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS-----CC--SBSSCTTS---SSSS---CE
T ss_pred CCCCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc-----cC--CcccChhH---hCCC---Ce
Confidence 3445566789999998 99985 457889999999999887666554321 12 23333221 0000 11
Q ss_pred ccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHH
Q 011490 424 PVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDIL 480 (484)
Q Consensus 424 ~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 480 (484)
.-+.++|.++|.....+. ..++++.+++.+++... +.|.++.+.++.+.+...
T Consensus 667 ~~~~~eL~~~i~~~~~~~---~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 667 YTEPYGLAKELKNLDKVQ---QQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp ESSHHHHHHHHTTHHHHH---HHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHhhhhccc---hhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCc
Confidence 467889999998776422 26778888888887655 667777777777666554
No 196
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=28.00 E-value=59 Score=29.13 Aligned_cols=32 Identities=25% Similarity=0.213 Sum_probs=24.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
|+++++-++.| =-..+|++|+++|++|+++..
T Consensus 26 k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 26 KTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 67777755543 346889999999999988764
No 197
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=27.96 E-value=36 Score=30.39 Aligned_cols=47 Identities=9% Similarity=0.028 Sum_probs=38.9
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHH--------HHHC-CCeEEEEeCCCchhhhhHH
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARL--------LAQH-GALVTIVTTPMNAARFQNV 54 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~--------L~~r-Gh~V~~~~~~~~~~~v~~~ 54 (484)
+.+|++.+.++-.|-....-++.. |..+ |++|+......-.+.+.+.
T Consensus 120 ~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~a 175 (262)
T 1xrs_B 120 KIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKK 175 (262)
T ss_dssp CEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHH
T ss_pred CCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHH
Confidence 679999999999999999999988 9999 9999998875544444333
No 198
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=27.87 E-value=2.6e+02 Score=23.20 Aligned_cols=139 Identities=17% Similarity=0.191 Sum_probs=75.9
Q ss_pred cEEEEecCCCccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHh---cCCCeEeeCcCChhhhcCC
Q 011490 280 SAVYVCLGSLCDSSTRQLIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERI---EGRGLLIRGWAPQVVILSH 356 (484)
Q Consensus 280 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~---~~~nv~~~~~~pq~~ll~~ 356 (484)
|.|-|-+||.+ +....++....++..+.++=..+-+-.. .|+.+.+.. ...+
T Consensus 14 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR--------~p~~l~~~~~~a~~~g--------------- 68 (183)
T 1o4v_A 14 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSAHR--------TPDRMFEYAKNAEERG--------------- 68 (183)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT--------CHHHHHHHHHHTTTTT---------------
T ss_pred CeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcccC--------CHHHHHHHHHHHHhCC---------------
Confidence 46778888766 5566777888888888887655544322 444432211 1111
Q ss_pred CCccccccccch----hhHHHHHHcCCCEeccccccc--hhhHH-HHHHHHh--cceeEe-ccCCCCCCcccccCCCccC
Q 011490 357 PAIGGFLTHCGW----NSVLEAVSNGLPMVTWPFFAD--QFCNE-KLVVQVL--RIGVTI-GAERPPSLADEERNGVPVK 426 (484)
Q Consensus 357 ~~~~~~I~HgG~----~s~~eal~~GvP~l~~P~~~D--Q~~na-~~~~e~~--G~g~~l-~~~~~~~~~~~~~~~~~~~ 426 (484)
.++ +|.=.|. .++..++ .-+|+|.+|.... .-..+ .-+. .. |+.+.. ..+ +..+
T Consensus 69 ~~V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSiv-qmP~GvpVatV~Id------------~~~n 132 (183)
T 1o4v_A 69 IEV--IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIV-QMPGGVPVATVAIN------------NAKN 132 (183)
T ss_dssp CCE--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHH-TCCTTCCCEECCTT------------CHHH
T ss_pred CcE--EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCeeEEEecC------------CchH
Confidence 223 6655553 2444443 6789999998552 11122 1122 33 433222 111 1356
Q ss_pred HHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHhh
Q 011490 427 KEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEE 464 (484)
Q Consensus 427 ~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~ 464 (484)
+.-++..|- -++|+ .++++.+..++.+++.+.+
T Consensus 133 Aa~lAaqIl-a~~d~----~l~~kL~~~r~~~~~~v~~ 165 (183)
T 1o4v_A 133 AGILAASIL-GIKYP----EIARKVKEYKERMKREVLE 165 (183)
T ss_dssp HHHHHHHHH-HTTCH----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hcCCH----HHHHHHHHHHHHHHHHHHH
Confidence 666666554 34556 7777777777776655443
No 199
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=27.83 E-value=96 Score=26.87 Aligned_cols=38 Identities=24% Similarity=0.230 Sum_probs=26.4
Q ss_pred CCCCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 1 m~~~~~~~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
|.++.+ |+++++- +.|-+ -..+++.|+++|++|+++.-
T Consensus 1 m~~l~~---k~vlVTG-as~gI--G~~ia~~l~~~G~~V~~~~r 38 (246)
T 2ag5_A 1 MGRLDG---KVIILTA-AAQGI--GQAAALAFAREGAKVIATDI 38 (246)
T ss_dssp CCTTTT---CEEEESS-TTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCC---CEEEEeC-CCcHH--HHHHHHHHHHCCCEEEEEEC
Confidence 544444 5677774 44433 46789999999999998864
No 200
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=27.70 E-value=81 Score=28.33 Aligned_cols=37 Identities=8% Similarity=-0.113 Sum_probs=27.2
Q ss_pred cEEEEEcCCCC-CCHH---HHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQ-GHMI---PMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~-GHv~---P~l~La~~L~~rGh~V~~~~~~ 45 (484)
+||+++..+.. .|-. ....++++|.++||+|..+...
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 58888876532 3333 4468999999999999998764
No 201
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=27.56 E-value=56 Score=25.01 Aligned_cols=38 Identities=8% Similarity=-0.069 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCCCCH--HHHHHHHHHHHHCC--CeEEEEeCC
Q 011490 8 QLHFILFPFLAQGHM--IPMIDIARLLAQHG--ALVTIVTTP 45 (484)
Q Consensus 8 ~~kil~~~~~~~GHv--~P~l~La~~L~~rG--h~V~~~~~~ 45 (484)
.+|++|+.+...-.. +-.+.+|...+++| |+|.++.-.
T Consensus 7 ~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G 48 (117)
T 2fb6_A 7 NDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWG 48 (117)
T ss_dssp TSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECS
T ss_pred CCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEEC
Confidence 467777776533222 34678899999999 899999765
No 202
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=27.49 E-value=85 Score=27.34 Aligned_cols=42 Identities=26% Similarity=0.173 Sum_probs=27.9
Q ss_pred CCCCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 1 m~~~~~~~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|..++.-+-|+++++-++. -+ -.++|++|+++|++|.++...
T Consensus 1 M~~~~~l~gk~~lVTGas~-gI--G~a~a~~l~~~G~~V~~~~r~ 42 (248)
T 3op4_A 1 MSQFMNLEGKVALVTGASR-GI--GKAIAELLAERGAKVIGTATS 42 (248)
T ss_dssp -CCTTCCTTCEEEESSCSS-HH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CccccCCCCCEEEEeCCCC-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 4444221347888885554 33 467899999999999887643
No 203
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=27.16 E-value=1.9e+02 Score=27.81 Aligned_cols=30 Identities=17% Similarity=0.179 Sum_probs=23.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
||+++-. | ...+.+++++++.|++|+.+.+
T Consensus 4 ~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~ 33 (449)
T 2w70_A 4 KIVIANR---G--EIALRILRACKELGIKTVAVHS 33 (449)
T ss_dssp EEEECCC---H--HHHHHHHHHHHHHTCEEEEEEE
T ss_pred eEEEeCC---c--HHHHHHHHHHHHcCCeEEEEec
Confidence 6777753 3 3567899999999999988864
No 204
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=27.14 E-value=36 Score=30.94 Aligned_cols=32 Identities=25% Similarity=0.244 Sum_probs=25.7
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
.||.++-.|..|+ .+|..|+++||+|+++...
T Consensus 16 ~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 4799988777765 5888999999999988543
No 205
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=27.14 E-value=1.6e+02 Score=27.66 Aligned_cols=39 Identities=8% Similarity=0.064 Sum_probs=33.3
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCch
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNA 48 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~ 48 (484)
-++++-.|+.|-..=.+.++..++++|..|.|++.+...
T Consensus 76 li~I~G~pGsGKTtlal~la~~~~~~g~~vlyi~~E~s~ 114 (366)
T 1xp8_A 76 ITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHAL 114 (366)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred EEEEEcCCCCChHHHHHHHHHHHHHCCCeEEEEECCCCh
Confidence 366677789999999999999999999999999886543
No 206
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=26.99 E-value=39 Score=31.31 Aligned_cols=33 Identities=18% Similarity=0.307 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
++||.|+-.|..| ..+|..|++.||+|+++...
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 4789999877776 57899999999999998653
No 207
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=26.97 E-value=44 Score=30.95 Aligned_cols=33 Identities=15% Similarity=0.099 Sum_probs=27.0
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
.+||+++-.|+.| ..+|..|++.||+|+++...
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEECh
Confidence 4689999777666 46789999999999999763
No 208
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=26.97 E-value=49 Score=27.14 Aligned_cols=36 Identities=25% Similarity=0.346 Sum_probs=29.2
Q ss_pred cEEEEEcCCCCC-----CHHHHHHHHHHHHHCCCeEEEEeCCC
Q 011490 9 LHFILFPFLAQG-----HMIPMIDIARLLAQHGALVTIVTTPM 46 (484)
Q Consensus 9 ~kil~~~~~~~G-----Hv~P~l~La~~L~~rGh~V~~~~~~~ 46 (484)
.+|+++|. +| =-++...|++.|.++|.+|.|..+|-
T Consensus 31 ~~ViIVPG--YGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 31 HSVIITPG--YGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp SEEEEECS--BHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CeEEEECC--hHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 46777764 43 34689999999999999999999884
No 209
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=26.70 E-value=32 Score=31.25 Aligned_cols=32 Identities=19% Similarity=0.150 Sum_probs=26.7
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
++||.|+-.+..|. .+|+.|+++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 56899998877774 689999999999998854
No 210
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=26.69 E-value=65 Score=29.54 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=26.9
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
.+||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 4689999888777 6789999999999998753
No 211
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=26.60 E-value=1.9e+02 Score=25.43 Aligned_cols=33 Identities=24% Similarity=0.097 Sum_probs=24.9
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
-|+++++-++. -+ -.++|++|+++|++|.+...
T Consensus 28 ~k~vlVTGas~-gI--G~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 28 DRIALVTGASR-GI--GRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TCEEEETTCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCC-HH--HHHHHHHHHHCCCEEEEEeC
Confidence 46788885554 33 46789999999999988764
No 212
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=26.46 E-value=25 Score=31.64 Aligned_cols=29 Identities=17% Similarity=0.273 Sum_probs=24.5
Q ss_pred CCCccccccccchhhHHHHHHc------CCCEecccc
Q 011490 356 HPAIGGFLTHCGWNSVLEAVSN------GLPMVTWPF 386 (484)
Q Consensus 356 ~~~~~~~I~HgG~~s~~eal~~------GvP~l~~P~ 386 (484)
.+++ +|.=||=||+.+++.. ++|++.+|.
T Consensus 35 ~~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 35 EPEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp SCSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 3555 9999999999999765 899999976
No 213
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=26.36 E-value=83 Score=27.07 Aligned_cols=37 Identities=8% Similarity=-0.035 Sum_probs=28.8
Q ss_pred cEEEEEcCCCCCC--HHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQGH--MIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~GH--v~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
..++++.+|..|+ ..-+..+++.|.++|+.|..+-.+
T Consensus 46 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 84 (270)
T 3pfb_A 46 YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFN 84 (270)
T ss_dssp EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccc
Confidence 4566777777766 666889999999999998887544
No 214
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=26.09 E-value=1.1e+02 Score=30.14 Aligned_cols=100 Identities=15% Similarity=0.149 Sum_probs=54.0
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCCCCccC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEGCESWD 87 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~ 87 (484)
++|-+|++. .|=.-++.+|+.|.+.|.++. ++....+.+++. |+....+.. -.++|+.....
T Consensus 9 ~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~~---vTgfPEil~GR- 70 (523)
T 3zzm_A 9 PIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT---------GIPVTPVEQ---LTGFPEVLDGR- 70 (523)
T ss_dssp CCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT---------TCCCEEHHH---HHSCCCCTTTT-
T ss_pred cccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc---------CCceeeccc---cCCCchhhCCc-
Confidence 455566665 466779999999999999876 444444444444 555544421 12455554321
Q ss_pred CCCccchHHHHHHHH---HHchHHHHHHHHhcCCCCeEEEecCC
Q 011490 88 KLPSMALLPKFFAAI---EMLRLPLETLFKEIQPKPSCLISDVC 128 (484)
Q Consensus 88 ~~~~~~~~~~~~~~~---~~~~~~l~~~l~~~~~~~D~vI~D~~ 128 (484)
++.+. ..+...+ +...+.+.++-+.-..++|+||++..
T Consensus 71 -VKTLH--P~ihgGiLa~r~~~~h~~~l~~~~i~~iDlVvvNLY 111 (523)
T 3zzm_A 71 -VKTLH--PRVHAGLLADLRKSEHAAALEQLGIEAFELVVVNLY 111 (523)
T ss_dssp -SSSCS--HHHHHHHHCCTTSHHHHHHHHHHTCCCCSEEEEECC
T ss_pred -cccCC--chhhhhhccCCCCHHHHHHHHHCCCCceeEEEEeCC
Confidence 11111 1222222 12233344433322368899999875
No 215
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=26.05 E-value=76 Score=27.82 Aligned_cols=33 Identities=21% Similarity=0.145 Sum_probs=24.7
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|+++++-++.| + -..+|++|+++|++|.++...
T Consensus 9 k~~lVTGas~g-I--G~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 9 KKAIVIGGTHG-M--GLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp CEEEEETCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 67777755543 3 468899999999999888643
No 216
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=25.77 E-value=2.3e+02 Score=26.41 Aligned_cols=37 Identities=8% Similarity=0.125 Sum_probs=31.0
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCc
Q 011490 11 FILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMN 47 (484)
Q Consensus 11 il~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~ 47 (484)
++++-.++.|=..=++.++..++..|..|.|+..+..
T Consensus 64 ~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s 100 (356)
T 3hr8_A 64 VEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHA 100 (356)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 5566667899999999999999999999999987653
No 217
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=25.75 E-value=88 Score=26.82 Aligned_cols=37 Identities=11% Similarity=0.079 Sum_probs=28.5
Q ss_pred cEEEEEcCCCCCC--HHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQGH--MIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~GH--v~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
...+++.++..|+ ..-+..+++.|.++|++|..+--+
T Consensus 27 ~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 65 (251)
T 2wtm_A 27 CPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMY 65 (251)
T ss_dssp EEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCC
Confidence 3466667787888 777888999999999998776433
No 218
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=25.70 E-value=73 Score=28.65 Aligned_cols=31 Identities=23% Similarity=0.079 Sum_probs=24.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEe
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVT 43 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~ 43 (484)
|+++++-.+.| + -..+|+.|+++|++|+++.
T Consensus 10 k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 10 PVALVTGAAKR-L--GRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCch-H--HHHHHHHHHHCCCeEEEEc
Confidence 67888755543 3 5689999999999999886
No 219
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=25.63 E-value=97 Score=26.03 Aligned_cols=37 Identities=8% Similarity=-0.076 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCCCCH----HHHHHHHHHHHHCCCeEEEEeCC
Q 011490 8 QLHFILFPFLAQGHM----IPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 8 ~~kil~~~~~~~GHv----~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
+++|.++.... +.- .-...|++.|+++||.|++-..+
T Consensus 13 ~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 13 RWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 57899988655 443 44677888889999998877544
No 220
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=25.48 E-value=43 Score=29.77 Aligned_cols=32 Identities=22% Similarity=0.122 Sum_probs=25.7
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEe
Q 011490 12 ILFPFLAQGHMIPMIDIARLLAQHGALVTIVT 43 (484)
Q Consensus 12 l~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~ 43 (484)
+++.+|..|+-.-+..+++.|+++|++|..+-
T Consensus 54 VlllHG~~~s~~~~~~la~~La~~Gy~Via~D 85 (281)
T 4fbl_A 54 VLVSHGFTGSPQSMRFLAEGFARAGYTVATPR 85 (281)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTCEEEECC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEEEEC
Confidence 44557877887778899999999999987753
No 221
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=25.43 E-value=1.1e+02 Score=24.95 Aligned_cols=37 Identities=16% Similarity=0.035 Sum_probs=29.6
Q ss_pred cEEEEEcCCCCCCHHHHHH--HHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQGHMIPMID--IARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~--La~~L~~rGh~V~~~~~~ 45 (484)
...+++.++..|+..-+.. +++.|+++|+.|..+-.+
T Consensus 32 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 70 (210)
T 1imj_A 32 RFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLP 70 (210)
T ss_dssp SCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCT
T ss_pred CceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCC
Confidence 4567777788888888888 599999999998887544
No 222
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=25.40 E-value=2e+02 Score=25.98 Aligned_cols=32 Identities=22% Similarity=0.073 Sum_probs=24.6
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
|+++++-++. -+ -..+|+.|+++|++|+++..
T Consensus 47 k~~lVTGas~-GI--G~aia~~la~~G~~Vv~~~~ 78 (317)
T 3oec_A 47 KVAFITGAAR-GQ--GRTHAVRLAQDGADIVAIDL 78 (317)
T ss_dssp CEEEESSCSS-HH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCc-HH--HHHHHHHHHHCCCeEEEEec
Confidence 6888886554 33 46889999999999998853
No 223
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=25.37 E-value=2.7e+02 Score=22.54 Aligned_cols=143 Identities=16% Similarity=0.174 Sum_probs=0.0
Q ss_pred CcEEEEecCCCccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCC
Q 011490 279 GSAVYVCLGSLCDSSTRQLIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPA 358 (484)
Q Consensus 279 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~ 358 (484)
++.|-|-+||.+ +....++....++..+.++-..+-+-+. .|+.+. +|+....--....
T Consensus 2 ~~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR--------~p~~~~-----------~~~~~a~~~~~~~ 60 (159)
T 3rg8_A 2 RPLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSAHK--------TAEHVV-----------SMLKEYEALDRPK 60 (159)
T ss_dssp CCEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT--------CHHHHH-----------HHHHHHHTSCSCE
T ss_pred CCeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcccC--------CHHHHH-----------HHHHHhhhcCCCc
Q ss_pred ccccccccchhhHHHHHHcC---CCEecccccc---chhhHHHHHHHHh--cceeEeccCCCCCCcccccCCCccCHHHH
Q 011490 359 IGGFLTHCGWNSVLEAVSNG---LPMVTWPFFA---DQFCNEKLVVQVL--RIGVTIGAERPPSLADEERNGVPVKKEDV 430 (484)
Q Consensus 359 ~~~~I~HgG~~s~~eal~~G---vP~l~~P~~~---DQ~~na~~~~e~~--G~g~~l~~~~~~~~~~~~~~~~~~~~~~l 430 (484)
+ +|.=.|...-+-++.+| +|+|.+|... +-.+ -.-+. .. |+.+.--.. ..++.-+
T Consensus 61 V--iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~d-LlS~v-qmp~GvpVatv~~-------------~~nAa~l 123 (159)
T 3rg8_A 61 L--YITIAGRSNALSGFVDGFVKGATIACPPPSDSFAGAD-IYSSL-RMPSGISPALVLE-------------PKNAALL 123 (159)
T ss_dssp E--EEEECCSSCCHHHHHHHHSSSCEEECCCCCCGGGGTH-HHHHH-CCCTTCCCEECCS-------------HHHHHHH
T ss_pred E--EEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCCcc-HHHHH-hCCCCCceEEecC-------------chHHHHH
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHhh
Q 011490 431 KKAINMLMDEGEERDERRRRAREYGETAKTAIEE 464 (484)
Q Consensus 431 ~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~ 464 (484)
+..| --++|+ .++++.+.+++.+++.+.+
T Consensus 124 A~~I-l~~~d~----~l~~kl~~~r~~~~~~v~~ 152 (159)
T 3rg8_A 124 AARI-FSLYDK----EIADSVKSYMESNAQKIIE 152 (159)
T ss_dssp HHHH-HTTTCH----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HhCCCH----HHHHHHHHHHHHHHHHHHH
No 224
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=25.34 E-value=4.3e+02 Score=24.87 Aligned_cols=128 Identities=13% Similarity=0.168 Sum_probs=66.5
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCcc
Q 011490 281 AVYVCLGSLCDSSTRQLIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIG 360 (484)
Q Consensus 281 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~ 360 (484)
++-|..+++.+ ..+++++++.+.+++.+.|-.. ++.+| + .-.+......| .++
T Consensus 228 ~lkIgs~~~~n------~~LL~~~a~~gkPVilk~G~~~---t~~e~-~-~Ave~i~~~Gn---------------~~i- 280 (385)
T 3nvt_A 228 VIQIGARNMQN------FELLKAAGRVDKPILLKRGLSA---TIEEF-I-GAAEYIMSQGN---------------GKI- 280 (385)
T ss_dssp EEEECGGGTTC------HHHHHHHHTSSSCEEEECCTTC---CHHHH-H-HHHHHHHTTTC---------------CCE-
T ss_pred EEEECcccccC------HHHHHHHHccCCcEEEecCCCC---CHHHH-H-HHHHHHHHcCC---------------CeE-
Confidence 67777777665 2577888889999999987633 23443 1 11111001111 233
Q ss_pred ccccccchhh------------HHHHH--HcCCCEecccccc--chh---hHHHHHHHHhcc-eeEeccCCCCCCccccc
Q 011490 361 GFLTHCGWNS------------VLEAV--SNGLPMVTWPFFA--DQF---CNEKLVVQVLRI-GVTIGAERPPSLADEER 420 (484)
Q Consensus 361 ~~I~HgG~~s------------~~eal--~~GvP~l~~P~~~--DQ~---~na~~~~e~~G~-g~~l~~~~~~~~~~~~~ 420 (484)
+++|||..| ....+ .+|+|+++=|-++ +.. ..+...+ .+|+ |+.+..-..++-+. .+
T Consensus 281 -~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G~r~~v~~~a~AAv-A~GA~gl~iE~H~~pd~a~-~D 357 (385)
T 3nvt_A 281 -ILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAAL-AIEADGVMAEVHPDPAVAL-SD 357 (385)
T ss_dssp -EEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHCCGGGHHHHHHHHH-HTTCSEEEEEBCSCGGGCS-SC
T ss_pred -EEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCCccchHHHHHHHHH-HhCCCEEEEEecCChhhcC-Cc
Confidence 777776431 12223 2589976555443 221 2344443 6776 45665432222111 22
Q ss_pred CCCccCHHHHHHHHHHHh
Q 011490 421 NGVPVKKEDVKKAINMLM 438 (484)
Q Consensus 421 ~~~~~~~~~l~~ai~~vl 438 (484)
..-.++++++.+-++.+.
T Consensus 358 ~~~sl~p~el~~lv~~i~ 375 (385)
T 3nvt_A 358 SAQQMDIPEFEEFWNAIL 375 (385)
T ss_dssp TTTSBCHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHH
Confidence 224577788777776654
No 225
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=25.25 E-value=3.1e+02 Score=23.24 Aligned_cols=110 Identities=13% Similarity=-0.001 Sum_probs=0.0
Q ss_pred CCCCcEEEEEcCCCCCCHHHHHHHHHHHHHCC--CeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCCCC
Q 011490 5 AGSQLHFILFPFLAQGHMIPMIDIARLLAQHG--ALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLPEG 82 (484)
Q Consensus 5 ~~~~~kil~~~~~~~GHv~P~l~La~~L~~rG--h~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~ 82 (484)
|. ++||+++.++.... +.+|.+++++.+ ++|..+.+..-........+.. ++.+..++.....+
T Consensus 5 m~-~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~-----gIp~~~~~~~~~~~----- 70 (209)
T 4ds3_A 5 MK-RNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAA-----GIATQVFKRKDFAS----- 70 (209)
T ss_dssp -C-CEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHT-----TCCEEECCGGGSSS-----
T ss_pred CC-CccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHc-----CCCEEEeCccccCC-----
Q ss_pred CCccCCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-cchHHHHHHcCCCcEEEecc
Q 011490 83 CESWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCL-PWTVSSACKFNVPRIVFHGF 149 (484)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~v~~~~~ 149 (484)
-....+.+.+.+++ .+||++|+-.+. .-...+-....-.++-++++
T Consensus 71 -------------------r~~~d~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 71 -------------------KEAHEDAILAALDV--LKPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp -------------------HHHHHHHHHHHHHH--HCCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred -------------------HHHHHHHHHHHHHh--cCCCEEEEeccccCcCHHHHhhccCCeEEECCc
No 226
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=25.20 E-value=60 Score=27.40 Aligned_cols=36 Identities=19% Similarity=0.020 Sum_probs=29.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
.+.+++.++..|+-.-+..+++.|.++|+.|..+-.
T Consensus 22 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 57 (251)
T 3dkr_A 22 DTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLF 57 (251)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCC
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCC
Confidence 456667778888888889999999999999877543
No 227
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=25.19 E-value=92 Score=25.37 Aligned_cols=45 Identities=13% Similarity=-0.029 Sum_probs=34.7
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhh
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQ 52 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~ 52 (484)
+.-.+++..+..--.+|.+.||..-++.|++|+++.+...-..+.
T Consensus 5 ~kl~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~ 49 (160)
T 3pnx_A 5 KKMNLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLR 49 (160)
T ss_dssp CEEEEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGB
T ss_pred CcEEEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhc
Confidence 344566666788889999999999999999999998765433333
No 228
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=25.17 E-value=1.1e+02 Score=27.15 Aligned_cols=39 Identities=26% Similarity=0.175 Sum_probs=26.3
Q ss_pred CCCCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 1 m~~~~~~~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|..+++ |+++++-. .|-+ -..+++.|+++|++|+++.-.
T Consensus 1 m~~~~~---k~vlVTGa-s~gI--G~~ia~~l~~~G~~V~~~~r~ 39 (278)
T 1spx_A 1 MTRFAE---KVAIITGS-SNGI--GRATAVLFAREGAKVTITGRH 39 (278)
T ss_dssp -CTTTT---CEEEETTT-TSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCC---CEEEEeCC-CchH--HHHHHHHHHHCCCEEEEEeCC
Confidence 444444 56777744 4433 457899999999999988643
No 229
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=25.08 E-value=85 Score=27.84 Aligned_cols=32 Identities=22% Similarity=0.316 Sum_probs=24.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
+||+++ |+ |-+ -..|++.|.++||+|+.++-.
T Consensus 4 ~~ilVt--Ga-G~i--G~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 4 SKILIA--GC-GDL--GLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCEEEE--CC-SHH--HHHHHHHHHHTTCCEEEEECT
T ss_pred CcEEEE--CC-CHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 467766 45 744 457899999999999999754
No 230
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=24.95 E-value=71 Score=29.55 Aligned_cols=73 Identities=11% Similarity=0.089 Sum_probs=45.7
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhH
Q 011490 292 SSTRQLIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSV 371 (484)
Q Consensus 292 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~ 371 (484)
.+.+....+.+++.....+.||.+.++... .++.++++...+-.+|.. ||=..=..++
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~--------------------~rlL~~LD~~~i~~~PK~--~~GySDiT~L 119 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGGFNS--------------------NQLLPYLDYDLISENPKI--LCGFSDITAL 119 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSCG--------------------GGGGGGCCHHHHHHSCCE--EEECTTHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCchhH--------------------HHHhhhcchhhhccCCeE--EEecccccHH
Confidence 345667779999999999999998776432 133455555555556655 6655555555
Q ss_pred HHHHH--cCCCEecccc
Q 011490 372 LEAVS--NGLPMVTWPF 386 (484)
Q Consensus 372 ~eal~--~GvP~l~~P~ 386 (484)
+-+++ .|+..+.-|.
T Consensus 120 ~~al~~~~g~~t~hGp~ 136 (327)
T 4h1h_A 120 ATAIYTQTELITYSGAH 136 (327)
T ss_dssp HHHHHHHHCBCEEECCC
T ss_pred HHHHHHhcCeEEEeCcc
Confidence 55554 3444444443
No 231
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=24.94 E-value=2.1e+02 Score=25.26 Aligned_cols=33 Identities=27% Similarity=0.107 Sum_probs=25.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
-|+++++-.+.| + -.++|+.|+++|++|+++..
T Consensus 11 ~k~~lVTGas~g-I--G~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 11 GKVAFVTGAARG-Q--GRSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp TCEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCch-H--HHHHHHHHHHCCCeEEEEec
Confidence 367888865543 3 56899999999999998753
No 232
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=24.93 E-value=2.3e+02 Score=24.64 Aligned_cols=32 Identities=16% Similarity=0.259 Sum_probs=24.5
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
|+++++-.+.| + -..+|++|+++|++|+++..
T Consensus 12 k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 12 KVVVISGVGPA-L--GTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp CEEEEESCCTT-H--HHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEECCCcH-H--HHHHHHHHHHCcCEEEEEeC
Confidence 67777755543 3 46889999999999988764
No 233
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=24.84 E-value=57 Score=28.61 Aligned_cols=38 Identities=18% Similarity=0.252 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCCCCH--HHHHHHHHHHHHCCCeEEEEeCC
Q 011490 8 QLHFILFPFLAQGHM--IPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 8 ~~kil~~~~~~~GHv--~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
+.-++++.++..+|- .-+..+|+.|+++|+.|..+-.+
T Consensus 55 ~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~r 94 (259)
T 4ao6_A 55 SDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGP 94 (259)
T ss_dssp CSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCC
T ss_pred CCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccC
Confidence 456888888887774 34778999999999999887654
No 234
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=24.82 E-value=1.2e+02 Score=26.65 Aligned_cols=34 Identities=21% Similarity=0.101 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
+.|+++++-++. -+ -.++|++|+++|++|.+...
T Consensus 26 ~~k~~lVTGas~-GI--G~aia~~la~~G~~Vv~~~~ 59 (267)
T 3u5t_A 26 TNKVAIVTGASR-GI--GAAIAARLASDGFTVVINYA 59 (267)
T ss_dssp -CCEEEEESCSS-HH--HHHHHHHHHHHTCEEEEEES
T ss_pred CCCEEEEeCCCC-HH--HHHHHHHHHHCCCEEEEEcC
Confidence 446778875544 22 46889999999999998743
No 235
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=24.76 E-value=1.5e+02 Score=22.05 Aligned_cols=38 Identities=8% Similarity=0.051 Sum_probs=27.6
Q ss_pred CCCCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEe
Q 011490 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVT 43 (484)
Q Consensus 1 m~~~~~~~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~ 43 (484)
|+..++ ++||+++-- |-.-...|.+.|.+.|++|..+.
T Consensus 1 M~~~~~-~~~ilivdd----~~~~~~~l~~~L~~~g~~v~~~~ 38 (130)
T 3eod_A 1 MTQPLV-GKQILIVED----EQVFRSLLDSWFSSLGATTVLAA 38 (130)
T ss_dssp --CTTT-TCEEEEECS----CHHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCCCC-CCeEEEEeC----CHHHHHHHHHHHHhCCceEEEeC
Confidence 555555 789999863 66667778888999999988754
No 236
>3fke_A Polymerase cofactor VP35; RNA binding domain, coiled coil, interferon antiviral system evasion, RNA replication, RNA-binding; 1.40A {Zaire ebolavirus - mayinga} PDB: 3l25_A 3l26_A 3l28_A 3l27_A 3l29_A 3l2a_A
Probab=24.75 E-value=90 Score=23.38 Aligned_cols=46 Identities=13% Similarity=0.145 Sum_probs=33.1
Q ss_pred HHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHH
Q 011490 428 EDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDIL 480 (484)
Q Consensus 428 ~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 480 (484)
.+|.++|.++-.|. +-...+.+.+.+.+++|.|.++++-++.+.+.
T Consensus 29 H~Lvqvi~kvgkd~-------~~Ld~~h~~F~~~L~eG~s~q~Ali~ITkr~~ 74 (129)
T 3fke_A 29 HQLVQVICKLGKDS-------NSLDIIHAEFQASLAEGDSPQCALIQITKRVP 74 (129)
T ss_dssp HHHHHHHHHHHHHT-------TCHHHHHHHHHHHHHHTCCHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHccch-------hHHHHHHHHHHHHHhcCCCcchhHHHHHhhch
Confidence 56777777775444 12445567778888999999999988887654
No 237
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=24.71 E-value=1e+02 Score=26.86 Aligned_cols=39 Identities=28% Similarity=0.270 Sum_probs=25.9
Q ss_pred CCCCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 1 m~~~~~~~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|.++.+ |.++++- +.|-+ -..++++|+++|++|+++...
T Consensus 1 M~~l~~---k~vlVTG-as~gI--G~~ia~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 1 MGLFAG---KGVLVTG-GARGI--GRAIAQAFAREGALVALCDLR 39 (256)
T ss_dssp -CTTTT---CEEEEET-TTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCC---CEEEEeC-CCCHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 444433 5666664 44433 457899999999999988654
No 238
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=24.65 E-value=40 Score=26.13 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=23.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
.||+++-. |.+- ..+++.|.++||+|+++...
T Consensus 7 ~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECC---SHHH--HHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 36777753 5443 46789999999999988653
No 239
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=24.63 E-value=66 Score=28.28 Aligned_cols=40 Identities=15% Similarity=0.109 Sum_probs=27.0
Q ss_pred HHHHHHHHhcCCCCeEEEecCCC-------cchHHHHHHcCCCcEEE
Q 011490 107 LPLETLFKEIQPKPSCLISDVCL-------PWTVSSACKFNVPRIVF 146 (484)
Q Consensus 107 ~~l~~~l~~~~~~~D~vI~D~~~-------~~a~~~A~~lgIP~v~~ 146 (484)
+.+.+.++++..+||++++|..- --|..+.-.+|+|+|-+
T Consensus 97 P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 143 (246)
T 3ga2_A 97 PLIIEAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGI 143 (246)
T ss_dssp HHHHHHHHHCSSCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEcCcEEecCCCcchhheeeeecCCCEEee
Confidence 34444455545689999999832 23556777788999864
No 240
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=24.58 E-value=2e+02 Score=25.16 Aligned_cols=33 Identities=21% Similarity=0.113 Sum_probs=24.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|.++++-++ |-+ -..+|+.|+++|++|++....
T Consensus 27 k~vlVTGas-~gI--G~~la~~l~~~G~~v~i~~~r 59 (267)
T 4iiu_A 27 RSVLVTGAS-KGI--GRAIARQLAADGFNIGVHYHR 59 (267)
T ss_dssp CEEEETTTT-SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEeCC
Confidence 567777544 434 468999999999999876643
No 241
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=24.56 E-value=3.5e+02 Score=24.78 Aligned_cols=110 Identities=16% Similarity=0.106 Sum_probs=60.6
Q ss_pred cEEEEecCCCccCCHHHHHHHHHHHHhC--CCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCC
Q 011490 280 SAVYVCLGSLCDSSTRQLIELGLGLEAT--KKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHP 357 (484)
Q Consensus 280 ~~V~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~ 357 (484)
.+.+|++|.++. ..+.++.+. +..++.+...+.. -.+.+.++. ++ ..+-...+++..+
T Consensus 15 rvgiiG~G~~g~-------~~~~~l~~~~~~~~lvav~d~~~~--------~~~~~~~~~---~~--~~~~~~~~ll~~~ 74 (354)
T 3q2i_A 15 RFALVGCGRIAN-------NHFGALEKHADRAELIDVCDIDPA--------ALKAAVERT---GA--RGHASLTDMLAQT 74 (354)
T ss_dssp EEEEECCSTTHH-------HHHHHHHHTTTTEEEEEEECSSHH--------HHHHHHHHH---CC--EEESCHHHHHHHC
T ss_pred eEEEEcCcHHHH-------HHHHHHHhCCCCeEEEEEEcCCHH--------HHHHHHHHc---CC--ceeCCHHHHhcCC
Confidence 488999998773 344566655 5566655543311 112222222 23 2345667788754
Q ss_pred Cccccccccc----hhhHHHHHHcCCCEecc-cccc--chh-hHHHHHHHHhcceeEeccC
Q 011490 358 AIGGFLTHCG----WNSVLEAVSNGLPMVTW-PFFA--DQF-CNEKLVVQVLRIGVTIGAE 410 (484)
Q Consensus 358 ~~~~~I~HgG----~~s~~eal~~GvP~l~~-P~~~--DQ~-~na~~~~e~~G~g~~l~~~ 410 (484)
++.+++--.- ..-+.+++.+|+++++= |+.. ++- .....+ ++.|+-+.+...
T Consensus 75 ~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a-~~~g~~~~v~~~ 134 (354)
T 3q2i_A 75 DADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAA-DKAKKHLFVVKQ 134 (354)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHH-HHHTCCEEECCG
T ss_pred CCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHH-HHhCCeEEEEEc
Confidence 4444553222 23466889999998873 6543 332 333444 577777666544
No 242
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=24.52 E-value=1.2e+02 Score=26.65 Aligned_cols=34 Identities=21% Similarity=0.186 Sum_probs=25.1
Q ss_pred EEEEEcCCCC-CCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFPFLAQ-GHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~~~~~-GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|+++++-.+. |-+ -..+|+.|+++|++|+++...
T Consensus 10 k~vlVTGas~~~gI--G~~ia~~l~~~G~~V~~~~r~ 44 (265)
T 1qsg_A 10 KRILVTGVASKLSI--AYGIAQAMHREGAELAFTYQN 44 (265)
T ss_dssp CEEEECCCCSTTSH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCCCCH--HHHHHHHHHHCCCEEEEEcCc
Confidence 5677775542 455 367899999999999988654
No 243
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=24.43 E-value=1.8e+02 Score=25.22 Aligned_cols=33 Identities=15% Similarity=-0.014 Sum_probs=24.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
.|+++++-++. -+ -.++|+.|+++|++|.++.-
T Consensus 7 ~k~vlVTGas~-GI--G~aia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 7 NATVAVIGAGD-YI--GAEIAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp SCEEEEECCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCc-hH--HHHHHHHHHHCCCEEEEEeC
Confidence 36777775554 33 56899999999999998865
No 244
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=24.43 E-value=64 Score=29.30 Aligned_cols=29 Identities=17% Similarity=0.257 Sum_probs=25.1
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEe
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVT 43 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~ 43 (484)
||.|+-.+.+|. ++|+.|.++||+|+++.
T Consensus 7 kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 7 KIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred cEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 899999988874 78999999999999864
No 245
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=24.38 E-value=2.5e+02 Score=24.09 Aligned_cols=21 Identities=19% Similarity=0.433 Sum_probs=16.3
Q ss_pred chHHHHHHHHhcCCCCeEEEecC
Q 011490 105 LRLPLETLFKEIQPKPSCLISDV 127 (484)
Q Consensus 105 ~~~~l~~~l~~~~~~~D~vI~D~ 127 (484)
....+.+++++ .+||+|++..
T Consensus 83 ~~~~l~~~ir~--~~P~~V~t~~ 103 (227)
T 1uan_A 83 QRLKLAQALRR--LRPRVVFAPL 103 (227)
T ss_dssp HHHHHHHHHHH--HCEEEEEEEC
T ss_pred HHHHHHHHHHH--hCCCEEEeCC
Confidence 45677788888 8999999743
No 246
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=24.38 E-value=80 Score=27.40 Aligned_cols=33 Identities=24% Similarity=0.257 Sum_probs=24.1
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|.++++ |+.|.+ -..++++|+++||+|+++...
T Consensus 8 k~vlVT-Gasggi--G~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 8 KRVLIT-GSSQGI--GLATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp CEEEET-TCSSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEe-CCCChH--HHHHHHHHHHCCCEEEEECCC
Confidence 456666 555555 457899999999999988653
No 247
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=23.88 E-value=1.1e+02 Score=28.12 Aligned_cols=75 Identities=16% Similarity=0.238 Sum_probs=54.7
Q ss_pred cCCHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcC-CCCccccccccchh
Q 011490 291 DSSTRQLIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILS-HPAIGGFLTHCGWN 369 (484)
Q Consensus 291 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~-~~~~~~~I~HgG~~ 369 (484)
..+.+....+.+++.....+.||.++++... .++.++++...+-. +|.. ||=+.-..
T Consensus 63 gtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyga--------------------~rlLp~LD~~~i~~a~PK~--~iGySDiT 120 (311)
T 1zl0_A 63 GTVEQRLEDLHNAFDMPDITAVWCLRGGYGC--------------------GQLLPGLDWGRLQAASPRP--LIGFSDIS 120 (311)
T ss_dssp SCHHHHHHHHHHHHHSTTEEEEEESCCSSCG--------------------GGGTTTCCHHHHHHSCCCC--EEECGGGH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEccCCcCH--------------------HHHhhccchhhhhccCCCE--EEEEchhH
Confidence 3456667789999999999999999887431 23456666666655 7777 88888888
Q ss_pred hHHHHHH-cCCCEeccccc
Q 011490 370 SVLEAVS-NGLPMVTWPFF 387 (484)
Q Consensus 370 s~~eal~-~GvP~l~~P~~ 387 (484)
.++-+++ .|++.+--|..
T Consensus 121 aL~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 121 VLLSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHHHHHTTCCEEECCCG
T ss_pred HHHHHHHHcCCcEEECHhh
Confidence 8888876 37777777754
No 248
>2gez_A L-asparaginase alpha subunit; isoaspartyl aminopeptidase, NTN-hydrolase, autoproteolysis, taspase, sodium binding, hydrolase; 2.60A {Lupinus luteus}
Probab=23.85 E-value=1.6e+02 Score=24.80 Aligned_cols=25 Identities=8% Similarity=0.219 Sum_probs=19.0
Q ss_pred HHHHHHhhCCChHHHHHHHHHHHHh
Q 011490 457 TAKTAIEEGGSSYLNIKLLIKDILQ 481 (484)
Q Consensus 457 ~~~~~~~~gg~~~~~~~~~~~~~~~ 481 (484)
...+.+..|||+.++++..++.++.
T Consensus 40 ~g~~~L~~G~sAlDAV~~av~~lEd 64 (195)
T 2gez_A 40 IGVEALKAQKPPLDVVELVVRELEN 64 (195)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 3333445699999999999998875
No 249
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=23.53 E-value=2.1e+02 Score=24.87 Aligned_cols=33 Identities=21% Similarity=0.089 Sum_probs=24.6
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
-|+++++-++.| + -.++|++|+++|++|.++..
T Consensus 8 ~k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~~ 40 (259)
T 3edm_A 8 NRTIVVAGAGRD-I--GRACAIRFAQEGANVVLTYN 40 (259)
T ss_dssp TCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEcC
Confidence 367777755543 3 46899999999999988744
No 250
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=23.49 E-value=76 Score=28.60 Aligned_cols=33 Identities=21% Similarity=0.255 Sum_probs=24.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
++|+++ |+.|.+ -..|+++|.++||+|+.+.-.
T Consensus 8 ~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 8 HRILIT--GGAGFI--GGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CEEEEE--TTTSHH--HHHHHHHHHHTTCCEEEECCC
T ss_pred CeEEEE--CCCChH--HHHHHHHHHHCCCEEEEEecC
Confidence 455554 556655 347889999999999998653
No 251
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=23.47 E-value=93 Score=27.37 Aligned_cols=35 Identities=17% Similarity=0.123 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
+-|+++++-++.| =-..+|+.|+++|++|+++...
T Consensus 7 ~~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 41 (265)
T 3lf2_A 7 SEAVAVVTGGSSG---IGLATVELLLEAGAAVAFCARD 41 (265)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3467888865543 3568899999999999887643
No 252
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=23.47 E-value=1e+02 Score=27.22 Aligned_cols=34 Identities=18% Similarity=0.066 Sum_probs=24.6
Q ss_pred EEEEEcCCCC-CCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFPFLAQ-GHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~~~~~-GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|+++++-.+. |-+ -..+|+.|+++|++|+++.-.
T Consensus 7 k~vlVTGas~~~gI--G~~~a~~l~~~G~~V~~~~r~ 41 (275)
T 2pd4_A 7 KKGLIVGVANNKSI--AYGIAQSCFNQGATLAFTYLN 41 (275)
T ss_dssp CEEEEECCCSTTSH--HHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEECCCCCCcH--HHHHHHHHHHCCCEEEEEeCC
Confidence 5667775541 444 357899999999999988654
No 253
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=23.46 E-value=3.1e+02 Score=22.53 Aligned_cols=113 Identities=9% Similarity=0.054 Sum_probs=64.1
Q ss_pred cEEEEecCCCccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEe---eCcCChhhhcCC
Q 011490 280 SAVYVCLGSLCDSSTRQLIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLI---RGWAPQVVILSH 356 (484)
Q Consensus 280 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~---~~~~pq~~ll~~ 356 (484)
.+++.-.||.... ....+++.|.+.++.+-.+...... .++-++.+.... . .++. ..|+++.++-..
T Consensus 7 ~IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~A~-----~fi~~~~l~~l~-~-~v~~~~~~~~~~hi~l~~~ 76 (175)
T 3qjg_A 7 NVLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTNGR-----KFINGEILKQFC-D-NYYDEFEDPFLNHVDIANK 76 (175)
T ss_dssp EEEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTGGG-----GGSCHHHHHHHC-S-CEECTTTCTTCCHHHHHHT
T ss_pred EEEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcCHH-----HHhhHHHHHHhc-C-CEEecCCCCccccccccch
Confidence 3666666666654 2455777777778777666554321 110234443322 2 3322 134556665555
Q ss_pred CCccccccccchhhHH-------------HHHHcCCCEecccccc----ch---hhHHHHHHHHhcce
Q 011490 357 PAIGGFLTHCGWNSVL-------------EAVSNGLPMVTWPFFA----DQ---FCNEKLVVQVLRIG 404 (484)
Q Consensus 357 ~~~~~~I~HgG~~s~~-------------eal~~GvP~l~~P~~~----DQ---~~na~~~~e~~G~g 404 (484)
+++ .+|.-|-.||+. -++..++|++++|-.. .. ..|-.++. ++|+=
T Consensus 77 aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~-~~G~~ 142 (175)
T 3qjg_A 77 HDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLK-DYGVS 142 (175)
T ss_dssp CSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHH-HTTCE
T ss_pred hCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHH-HCCCE
Confidence 554 578888888665 3477899999999432 22 34666673 66653
No 254
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=23.42 E-value=96 Score=27.54 Aligned_cols=33 Identities=27% Similarity=0.211 Sum_probs=24.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|+++++-.+ |-+ -..+|+.|+++|++|+++.-.
T Consensus 7 k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r~ 39 (280)
T 1xkq_A 7 KTVIITGSS-NGI--GRTTAILFAQEGANVTITGRS 39 (280)
T ss_dssp CEEEETTCS-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEeCC
Confidence 577777544 333 457899999999999988643
No 255
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=23.39 E-value=86 Score=27.02 Aligned_cols=95 Identities=18% Similarity=0.157 Sum_probs=0.0
Q ss_pred cEEEEecCCCccCCHHHHHH---HHHHHHhCCCCEEEEEeC-CCCCCCchhhhhhhHHHHHhcCCCeEeeCcCCh-----
Q 011490 280 SAVYVCLGSLCDSSTRQLIE---LGLGLEATKKPFIWVIRP-GDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQ----- 350 (484)
Q Consensus 280 ~~V~vs~GS~~~~~~~~~~~---~~~al~~~~~~~i~~~~~-~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq----- 350 (484)
+.|-|-.||....++..++. +.+.+++.++.+|.=-++ + +-+...+-....+-.+..-+|.
T Consensus 10 ~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~~G----------lM~aa~~gA~~~GG~~iGv~p~~l~~~ 79 (216)
T 1ydh_A 10 RKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVG----------LMGLISRRVYEGGLHVLGIIPKALMPI 79 (216)
T ss_dssp SEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSH----------HHHHHHHHHHHTTCCEEEEEEGGGHHH
T ss_pred CeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCccc----------HhHHHHHHHHHcCCcEEEEechhcCcc
Q ss_pred -------------------hhhcCCCCccccccccchhhHHHHH---------HcCCCEecc
Q 011490 351 -------------------VVILSHPAIGGFLTHCGWNSVLEAV---------SNGLPMVTW 384 (484)
Q Consensus 351 -------------------~~ll~~~~~~~~I~HgG~~s~~eal---------~~GvP~l~~ 384 (484)
..++..-+-..++--||.||+-|.. .+++|++.+
T Consensus 80 e~~~~~~~~~~~~~~~~~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll 141 (216)
T 1ydh_A 80 EISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLL 141 (216)
T ss_dssp HCCSSCCSEEEEESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEE
T ss_pred ccccCCCCcccccCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEe
No 256
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=23.33 E-value=42 Score=24.61 Aligned_cols=54 Identities=6% Similarity=0.015 Sum_probs=33.8
Q ss_pred CccCHHHHHHHHHHHhcCChhHHHHH--HHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHhh
Q 011490 423 VPVKKEDVKKAINMLMDEGEERDERR--RRAREYGETAKTAIEEGGSSYLNIKLLIKDILQQ 482 (484)
Q Consensus 423 ~~~~~~~l~~ai~~vl~~~~~~~~~r--~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 482 (484)
|.++.++|++.++.-+.+ .+. ..-..+.+.+++. +..|.....+++|+..+.+.
T Consensus 28 G~Is~~EL~~~l~~~lg~-----~l~~~~~~~ev~~~i~~~-D~d~DG~Idf~EF~~~~~~~ 83 (98)
T 3n22_A 28 FKLSKGEMKELLHKELPS-----FVGEKVDEEGLKKLMGSL-DENSDQQVDFQEYAVFLALI 83 (98)
T ss_dssp TSBCHHHHHHHHHHHCHH-----HHCSSCCHHHHHHHHHHH-CTTSSSSBCHHHHHHHHHHH
T ss_pred CeECHHHHHHHHHHHhhh-----hccCCCCHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHH
Confidence 489999999999863310 000 0123444555544 66677778888888877654
No 257
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=23.19 E-value=71 Score=28.14 Aligned_cols=37 Identities=19% Similarity=-0.050 Sum_probs=29.5
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
...+++.++..|+..-+..+++.|.++|++|..+-.+
T Consensus 46 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 82 (315)
T 4f0j_A 46 GRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQV 82 (315)
T ss_dssp SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecC
Confidence 3456666677788888999999999999999887554
No 258
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=23.19 E-value=2e+02 Score=23.50 Aligned_cols=51 Identities=8% Similarity=-0.033 Sum_probs=35.7
Q ss_pred CcEEEEEcCC-CCCCHH--HHHHHHHHHHHCCCeEEEEeC-CCchhhhhHHHhhc
Q 011490 8 QLHFILFPFL-AQGHMI--PMIDIARLLAQHGALVTIVTT-PMNAARFQNVIERG 58 (484)
Q Consensus 8 ~~kil~~~~~-~~GHv~--P~l~La~~L~~rGh~V~~~~~-~~~~~~v~~~~~~~ 58 (484)
++|+.+++.+ ..|.+. -.-.|+..|.+.|++|..... +++.+.+.+.+...
T Consensus 10 ~~~v~Ii~tGdE~g~i~D~n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a 64 (172)
T 1mkz_A 10 PTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAW 64 (172)
T ss_dssp CCEEEEEEECSSCCGGGCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHH
T ss_pred CCEEEEEEEeCCCCcccCccHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHH
Confidence 6899998887 445432 223489999999999887643 66666676666543
No 259
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=23.13 E-value=73 Score=31.81 Aligned_cols=105 Identities=15% Similarity=0.106 Sum_probs=53.5
Q ss_pred CCCCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCC
Q 011490 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTPMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLP 80 (484)
Q Consensus 1 m~~~~~~~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~ 80 (484)
|++..+ ++++...- -.-++.||+.|.+.|+++. ++....+.+++. |+....+. ...++|
T Consensus 1 ~~~~~G---~aLISV~D----K~~iv~lAk~L~~lGf~I~--ATgGTAk~L~e~---------GI~v~~V~---k~TgfP 59 (593)
T 1g8m_A 1 MAARQQ---LALLSVSE----KAGLVEFARSLNALGLGLI--ASGGTATALRDA---------GLPVRDVS---DLTGFP 59 (593)
T ss_dssp ---CCC---EEEEEESC----CTTHHHHHHHHHHTTCEEE--ECHHHHHHHHHT---------TCCCEEHH---HHHSCC
T ss_pred CCCCCC---EEEEEEeC----cHhHHHHHHHHHHCCCEEE--EchHHHHHHHHC---------CCeEEEee---cccCCc
Confidence 554434 56655543 4558899999999999876 455555555554 45555442 112556
Q ss_pred CCCCccCCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCC
Q 011490 81 EGCESWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVC 128 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~ 128 (484)
+.....-..-....-..+.. +.....+.++-+.-....|+||++..
T Consensus 60 E~l~GRVKTLHP~ihgGiLa--r~~~~h~~~l~~~~I~~iDlVvvNLY 105 (593)
T 1g8m_A 60 EMLGGRVKTLHPAVHAGILA--RNIPEDNADMNKQDFSLVRVVVCNLY 105 (593)
T ss_dssp CBGGGTBSSCSHHHHHHHHC--CSSHHHHHHHHHTTCCCEEEEEEECC
T ss_pred hhhcCCccccCchhhhhhcc--CCCHHHHHHHHHcCCCceeEEEEecc
Confidence 55432211111111112221 23334444444332367799998874
No 260
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=23.10 E-value=27 Score=31.88 Aligned_cols=32 Identities=19% Similarity=0.274 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHC-----C-CeEEEEeC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQH-----G-ALVTIVTT 44 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~r-----G-h~V~~~~~ 44 (484)
++||+|+-.|..|. .+|..|++. | |+|+++..
T Consensus 8 ~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 46899998777763 568888888 9 99999865
No 261
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=23.09 E-value=67 Score=29.60 Aligned_cols=33 Identities=15% Similarity=0.052 Sum_probs=27.2
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
.+||.|+-.+..| +-.+|+.|+++||+|+..=.
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 3589999888777 55799999999999998743
No 262
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=23.04 E-value=56 Score=29.17 Aligned_cols=32 Identities=16% Similarity=0.014 Sum_probs=24.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
+||+|+-.|..| ..+|..|+++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 468887665555 47899999999999998654
No 263
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=23.03 E-value=34 Score=31.37 Aligned_cols=32 Identities=16% Similarity=0.170 Sum_probs=24.3
Q ss_pred hcCCCCccccccccchhhHHHHHHc----CCCEecccc
Q 011490 353 ILSHPAIGGFLTHCGWNSVLEAVSN----GLPMVTWPF 386 (484)
Q Consensus 353 ll~~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~ 386 (484)
....+++ +|.-||=||+.+++.. ++|++.++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3345676 9999999999999754 899999875
No 264
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=22.99 E-value=3.3e+02 Score=23.26 Aligned_cols=102 Identities=17% Similarity=0.182 Sum_probs=64.8
Q ss_pred HHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhHHHHHHc
Q 011490 298 IELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSN 377 (484)
Q Consensus 298 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~ 377 (484)
.++++.++..+..+++..+...- +|+.+.......-+-+ |+++ .=..-|.+.+..|+.+
T Consensus 79 ~~~~~~l~~~~~Dlivlagy~~i--------L~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai~~ 137 (215)
T 3da8_A 79 VAITAATAAHEPDLVVSAGFMRI--------LGPQFLSRFYGRTLNT-----------HPAL--LPAFPGTHGVADALAY 137 (215)
T ss_dssp HHHHHHHHTTCCSEEEEEECCSC--------CCHHHHHHHTTTEEEE-----------ESSC--TTSSCSTTHHHHHHHH
T ss_pred HHHHHHHHhhCCCEEEEcCchhh--------CCHHHHhhccCCeEEe-----------Cccc--ccCCCCchHHHHHHHc
Confidence 45788888889999999887642 6777666544433333 4554 4455689999999999
Q ss_pred CCCEecccccc--chhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHH
Q 011490 378 GLPMVTWPFFA--DQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINML 437 (484)
Q Consensus 378 GvP~l~~P~~~--DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~v 437 (484)
|+....+-.+. +..+.+..+. + .-+.+... -|.++|.+.+..+
T Consensus 138 G~~~tGvTvh~v~~~lD~G~Ii~-Q--~~v~I~~~--------------dt~~~L~~rl~~~ 182 (215)
T 3da8_A 138 GVKVTGATVHLVDAGTDTGPILA-Q--QPVPVLDG--------------DDEETLHERIKVT 182 (215)
T ss_dssp TCSEEEEEEEECCSSSSCSCEEE-E--EEEECCTT--------------CCHHHHHHHHHHH
T ss_pred CCCeEEEEEEEEcCCCCCCCEEE-E--EEeecCCC--------------CCHHHHHHHHHHH
Confidence 99987776532 3333333331 1 12333333 5788888776543
No 265
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=22.93 E-value=1.4e+02 Score=26.78 Aligned_cols=34 Identities=24% Similarity=-0.003 Sum_probs=25.0
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
-|+++++-++. -+ -.++|++|+++|++|.+....
T Consensus 49 ~k~vlVTGas~-GI--G~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 49 DRKALVTGGDS-GI--GRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp TCEEEEETTTS-HH--HHHHHHHHHHTTCEEEEECCG
T ss_pred CCEEEEeCCCc-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 36777775544 33 468899999999999887544
No 266
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=22.88 E-value=89 Score=27.84 Aligned_cols=38 Identities=21% Similarity=0.163 Sum_probs=31.4
Q ss_pred CcEEEEEcC--CCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 8 QLHFILFPF--LAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 8 ~~kil~~~~--~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
++|+++++. |+-|-..=...||..|+++|..|.++-..
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 556666654 57899999999999999999999998554
No 267
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=22.83 E-value=1.2e+02 Score=22.46 Aligned_cols=31 Identities=19% Similarity=0.155 Sum_probs=17.4
Q ss_pred ccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHH
Q 011490 424 PVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTA 461 (484)
Q Consensus 424 ~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~ 461 (484)
.++++++.+....+- .++.+++-|.+.+...
T Consensus 2 ~~~~eq~~k~~~el~-------~v~~n~~lL~EML~~~ 32 (103)
T 1wrd_A 2 PLGSEQIGKLRSELE-------MVSGNVRVMSEMLTEL 32 (103)
T ss_dssp CSSSTTHHHHHHHHH-------HHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHH-------HHHHHHHHHHHHHHhc
Confidence 356666665554332 5566666666665543
No 268
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=22.81 E-value=65 Score=27.55 Aligned_cols=32 Identities=19% Similarity=0.345 Sum_probs=24.0
Q ss_pred CCCeEEE-ecCCC-cchHHHHHHcCCCcEEEecc
Q 011490 118 PKPSCLI-SDVCL-PWTVSSACKFNVPRIVFHGF 149 (484)
Q Consensus 118 ~~~D~vI-~D~~~-~~a~~~A~~lgIP~v~~~~~ 149 (484)
..||++| .|+.. --+..-|.++|||+|.++-+
T Consensus 114 ~~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDT 147 (208)
T 1vi6_A 114 REPEVVFVNDPAIDKQAVSEATAVGIPVVALCDS 147 (208)
T ss_dssp CCCSEEEESCTTTTHHHHHHHHHTTCCEEEEECT
T ss_pred CCCCEEEEECCCcchhHHHHHHHhCCCEEEEeCC
Confidence 4699766 66644 45778899999999997554
No 269
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=22.81 E-value=1.1e+02 Score=27.66 Aligned_cols=36 Identities=17% Similarity=0.182 Sum_probs=24.0
Q ss_pred CcEEEEE-cCCCCCCHHHHH--HHHHHHHHCCCeEEEEe
Q 011490 8 QLHFILF-PFLAQGHMIPMI--DIARLLAQHGALVTIVT 43 (484)
Q Consensus 8 ~~kil~~-~~~~~GHv~P~l--~La~~L~~rGh~V~~~~ 43 (484)
+||||++ .+|-...++-.+ ...+.|.++||+|+++-
T Consensus 22 ~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 22 SMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 6786655 455555455433 35677888999999873
No 270
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=22.75 E-value=2.2e+02 Score=24.92 Aligned_cols=34 Identities=18% Similarity=0.118 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
+.|+++++-++ |-+ -..+|++|+++|++|++...
T Consensus 25 ~~k~vlITGas-~gI--G~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 25 DTPVVLVTGGS-RGI--GAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp CSCEEEETTTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCC-chH--HHHHHHHHHHCCCEEEEEcC
Confidence 35677777544 433 46889999999999987743
No 271
>1k2x_A Putative L-asparaginase; NTN hydrolase, asparginase, autoproteolysis, hydrolase; HET: CME; 1.65A {Escherichia coli} SCOP: d.153.1.5 PDB: 1jn9_A* 1t3m_A 2zal_A
Probab=22.64 E-value=1.8e+02 Score=24.05 Aligned_cols=31 Identities=16% Similarity=0.154 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHhhCCChHHHHHHHHHHHHh
Q 011490 451 AREYGETAKTAIEEGGSSYLNIKLLIKDILQ 481 (484)
Q Consensus 451 a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~ 481 (484)
+++.-+...+.+..|||+.++++..++.++.
T Consensus 31 l~~a~~~~~~~L~~g~saldAV~~av~~lEd 61 (177)
T 1k2x_A 31 LSAIVETGQKMLEAGESALDVVTEAVRLLEE 61 (177)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 3333333334445699999999999988875
No 272
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=22.61 E-value=84 Score=28.27 Aligned_cols=32 Identities=19% Similarity=0.170 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
++||.|+-.|..|. .+|+.|.+.||+|+++..
T Consensus 4 ~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 67899998777764 468889999999987643
No 273
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=22.60 E-value=84 Score=29.19 Aligned_cols=74 Identities=15% Similarity=0.151 Sum_probs=53.1
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhH
Q 011490 292 SSTRQLIELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSV 371 (484)
Q Consensus 292 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~ 371 (484)
.+.+....+.+++.....+.||.+.++... .++.++++...+-.+|.. ||=+.-...+
T Consensus 63 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~--------------------~rlL~~lD~~~i~~~PK~--~~GySDiTaL 120 (336)
T 3sr3_A 63 SIQERAKELNALIRNPNVSCIMSTIGGMNS--------------------NSLLPYIDYDAFQNNPKI--MIGYSDATAL 120 (336)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSCG--------------------GGGGGGSCHHHHHHSCCE--EEECGGGHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccccH--------------------HHHhhhcChhHHhhCCeE--EEEechHHHH
Confidence 345667779999999999999999887532 234466666556567777 7777777777
Q ss_pred HHHHH--cCCCEeccccc
Q 011490 372 LEAVS--NGLPMVTWPFF 387 (484)
Q Consensus 372 ~eal~--~GvP~l~~P~~ 387 (484)
+-+++ .|++.+--|..
T Consensus 121 ~~al~~~~G~~t~hGp~~ 138 (336)
T 3sr3_A 121 LLGIYAKTGIPTFYGPAL 138 (336)
T ss_dssp HHHHHHHHCCCEEECCCH
T ss_pred HHHHHHhcCceEEECChh
Confidence 77776 58887777763
No 274
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=22.59 E-value=65 Score=29.06 Aligned_cols=37 Identities=3% Similarity=-0.107 Sum_probs=27.2
Q ss_pred cEEEEEcCCCCC---CHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQG---HMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~G---Hv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
+||+++..+... .......++++|+++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 379999877421 1234567999999999999998653
No 275
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=22.58 E-value=91 Score=27.18 Aligned_cols=32 Identities=13% Similarity=0.057 Sum_probs=23.9
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
|.++++ ++.|-+ -..++++|+++|++|+++..
T Consensus 8 k~vlIT-Gasggi--G~~~a~~l~~~G~~V~~~~r 39 (261)
T 1gee_A 8 KVVVIT-GSSTGL--GKSMAIRFATEKAKVVVNYR 39 (261)
T ss_dssp CEEEET-TCSSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEe-CCCChH--HHHHHHHHHHCCCEEEEEcC
Confidence 456666 445544 46899999999999998865
No 276
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=22.50 E-value=56 Score=27.83 Aligned_cols=32 Identities=19% Similarity=0.159 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
.+||.++-.+..| ..+|+.|+++||+|+++..
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 5688888765555 5678999999999998854
No 277
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=22.49 E-value=30 Score=30.81 Aligned_cols=29 Identities=28% Similarity=0.424 Sum_probs=24.5
Q ss_pred CCCccccccccchhhHHHHHHc---CCCEecccc
Q 011490 356 HPAIGGFLTHCGWNSVLEAVSN---GLPMVTWPF 386 (484)
Q Consensus 356 ~~~~~~~I~HgG~~s~~eal~~---GvP~l~~P~ 386 (484)
.+++ +|+=||=||+.+++.. ++|++.++.
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~ 72 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKA 72 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEES
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEEC
Confidence 4566 9999999999999876 888888863
No 278
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=22.30 E-value=72 Score=27.77 Aligned_cols=38 Identities=21% Similarity=0.114 Sum_probs=29.7
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
+..++++.+|..++..-+..+++.|+++|++|..+-.+
T Consensus 41 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 78 (303)
T 3pe6_A 41 PKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHV 78 (303)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCT
T ss_pred CCeEEEEECCCCchhhHHHHHHHHHHhCCCcEEEeCCC
Confidence 34567777777788778889999999999998877544
No 279
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=22.25 E-value=78 Score=27.10 Aligned_cols=36 Identities=17% Similarity=0.085 Sum_probs=28.3
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
..+++.+|..|+..-+..++..|.++|++|..+-.+
T Consensus 13 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 48 (267)
T 3sty_A 13 KHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLG 48 (267)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CeEEEECCCCCCcchHHHHHHHHHhcCCeEEEeccc
Confidence 455666677788888889999999999998887544
No 280
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=22.22 E-value=62 Score=24.59 Aligned_cols=17 Identities=29% Similarity=0.276 Sum_probs=11.8
Q ss_pred HHHHHHHHCCCeEEEEe
Q 011490 27 DIARLLAQHGALVTIVT 43 (484)
Q Consensus 27 ~La~~L~~rGh~V~~~~ 43 (484)
....++++.|.+|.+++
T Consensus 70 ~~i~~~~~~G~~V~~l~ 86 (117)
T 3hh1_A 70 RQVIELLEEGSDVALVT 86 (117)
T ss_dssp HHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHCCCeEEEEe
Confidence 33344456799999998
No 281
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=22.21 E-value=71 Score=29.08 Aligned_cols=29 Identities=17% Similarity=0.264 Sum_probs=25.9
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEe
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVT 43 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~ 43 (484)
||.|+-.+.+|. ++|+.|.++||+|+++.
T Consensus 5 kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~d 33 (300)
T 3obb_A 5 QIAFIGLGHMGA-----PMATNLLKAGYLLNVFD 33 (300)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEEC
T ss_pred EEEEeeehHHHH-----HHHHHHHhCCCeEEEEc
Confidence 799999998884 68999999999999884
No 282
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=22.19 E-value=65 Score=27.96 Aligned_cols=37 Identities=19% Similarity=0.128 Sum_probs=29.9
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
+..++++.++..|+..-+..+++.|+++|+.|..+-.
T Consensus 48 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 84 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAET 84 (258)
T ss_dssp CEEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECC
T ss_pred CceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecC
Confidence 3457777888888888889999999999998877643
No 283
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=22.16 E-value=2.4e+02 Score=24.98 Aligned_cols=34 Identities=21% Similarity=0.109 Sum_probs=25.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
.|+++++-++.| + -.++|++|+++|++|.++...
T Consensus 28 ~k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r~ 61 (283)
T 3v8b_A 28 SPVALITGAGSG-I--GRATALALAADGVTVGALGRT 61 (283)
T ss_dssp CCEEEEESCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 367788755543 3 468899999999999988643
No 284
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=22.14 E-value=1.1e+02 Score=23.61 Aligned_cols=36 Identities=17% Similarity=0.243 Sum_probs=23.4
Q ss_pred HHHhcCCCCeEEEecCCCc--chHHHHHHc---------CCCcEEEecc
Q 011490 112 LFKEIQPKPSCLISDVCLP--WTVSSACKF---------NVPRIVFHGF 149 (484)
Q Consensus 112 ~l~~~~~~~D~vI~D~~~~--~a~~~A~~l---------gIP~v~~~~~ 149 (484)
.++. .+||+||.|...+ .+..+.+.+ .+|.+.++..
T Consensus 53 ~~~~--~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 53 AMAE--EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp HHHH--SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred HHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 3445 6899999998654 344554443 3788877654
No 285
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=22.02 E-value=39 Score=30.66 Aligned_cols=27 Identities=11% Similarity=0.144 Sum_probs=0.0
Q ss_pred CCccccccccchhhHHHHHHc----CCCEeccc
Q 011490 357 PAIGGFLTHCGWNSVLEAVSN----GLPMVTWP 385 (484)
Q Consensus 357 ~~~~~~I~HgG~~s~~eal~~----GvP~l~~P 385 (484)
+++ +|.=||=||+.+++.. ++|++.++
T Consensus 64 ~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~ 94 (292)
T 2an1_A 64 ADL--AVVVGGDGNMLGAARTLARYDINVIGIN 94 (292)
T ss_dssp CSE--EEECSCHHHHHHHHHHHTTSSCEEEEBC
T ss_pred CCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEE
No 286
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=22.00 E-value=97 Score=26.23 Aligned_cols=32 Identities=6% Similarity=0.032 Sum_probs=27.0
Q ss_pred EEEEcC-CCCCCHHHHHHHHHHHHHCCCeEEEE
Q 011490 11 FILFPF-LAQGHMIPMIDIARLLAQHGALVTIV 42 (484)
Q Consensus 11 il~~~~-~~~GHv~P~l~La~~L~~rGh~V~~~ 42 (484)
|++... ++-|-..=.+.||..|+++|++|.++
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 444443 58899999999999999999999986
No 287
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=21.98 E-value=1.2e+02 Score=27.57 Aligned_cols=33 Identities=21% Similarity=0.165 Sum_probs=24.5
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|.++++-.+ |-+ -..||+.|+++|++|.++.-.
T Consensus 9 k~vlVTGas-~gI--G~~la~~l~~~G~~Vv~~~r~ 41 (319)
T 3ioy_A 9 RTAFVTGGA-NGV--GIGLVRQLLNQGCKVAIADIR 41 (319)
T ss_dssp CEEEEETTT-STH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEcCCc-hHH--HHHHHHHHHHCCCEEEEEECC
Confidence 577777544 444 467899999999999887653
No 288
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=21.98 E-value=1.3e+02 Score=22.43 Aligned_cols=36 Identities=11% Similarity=0.078 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEe
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVT 43 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~ 43 (484)
.+||++++..+.|+-.=.-.|-+.+.++|.++.+-+
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~ 39 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEA 39 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEE
Confidence 588999999999888666677778888898766544
No 289
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=21.90 E-value=1e+02 Score=26.80 Aligned_cols=32 Identities=31% Similarity=0.188 Sum_probs=23.7
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
|+++++-++. -+ -..+|+.|+++|++|.++..
T Consensus 7 k~vlVTGas~-gI--G~a~a~~l~~~G~~V~~~~r 38 (247)
T 3rwb_A 7 KTALVTGAAQ-GI--GKAIAARLAADGATVIVSDI 38 (247)
T ss_dssp CEEEEETTTS-HH--HHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCC-HH--HHHHHHHHHHCCCEEEEEeC
Confidence 6777775544 22 45889999999999988754
No 290
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=21.89 E-value=1.3e+02 Score=26.68 Aligned_cols=34 Identities=18% Similarity=0.209 Sum_probs=25.3
Q ss_pred EEEEEcCCCC-CCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFPFLAQ-GHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~~~~~-GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|+++++-.+. |-+ -..+|+.|+++|++|+++...
T Consensus 22 k~vlVTGas~~~gI--G~~ia~~l~~~G~~V~~~~r~ 56 (285)
T 2p91_A 22 KRALITGVANERSI--AYGIAKSFHREGAQLAFTYAT 56 (285)
T ss_dssp CEEEECCCSSTTSH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCCCcH--HHHHHHHHHHcCCEEEEEeCC
Confidence 5777775542 444 467899999999999988654
No 291
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=21.89 E-value=4.5e+02 Score=23.79 Aligned_cols=105 Identities=10% Similarity=0.023 Sum_probs=0.0
Q ss_pred CCCCcEEEEEcCCCCCCHHHHHHHHHHHHHC--CCeEEEEeC--CCchhhhhHHHhhcccCCCceEEEEeeCCCccCCCC
Q 011490 5 AGSQLHFILFPFLAQGHMIPMIDIARLLAQH--GALVTIVTT--PMNAARFQNVIERGIQSGLRIQVIEFYFPCQEVGLP 80 (484)
Q Consensus 5 ~~~~~kil~~~~~~~GHv~P~l~La~~L~~r--Gh~V~~~~~--~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~ 80 (484)
++ ++||+++.++. || -+-+|..+-++- +.+|..+.+ +......++. ++.+..+|.....
T Consensus 103 ~~-~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~---------gIp~~~~~~~~~~---- 165 (302)
T 3o1l_A 103 AQ-KKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWH---------DIPYYHVPVDPKD---- 165 (302)
T ss_dssp TS-CCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTT---------TCCEEECCCCSSC----
T ss_pred CC-CcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHc---------CCCEEEcCCCcCC----
Q ss_pred CCCCccCCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCCC-cchHHHHHHcCCCcEEEecc
Q 011490 81 EGCESWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVCL-PWTVSSACKFNVPRIVFHGF 149 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~~-~~a~~~A~~lgIP~v~~~~~ 149 (484)
-....+.+.+.+++ .++|+||+-.+. .-...+-..+.-.++-+.++
T Consensus 166 ---------------------r~~~~~~~~~~l~~--~~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 166 ---------------------KEPAFAEVSRLVGH--HQADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp ---------------------CHHHHHHHHHHHHH--TTCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred ---------------------HHHHHHHHHHHHHH--hCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
No 292
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=21.86 E-value=1.1e+02 Score=26.89 Aligned_cols=34 Identities=24% Similarity=0.113 Sum_probs=25.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
-|+++++-++. -+ -..+|+.|+++|++|.+....
T Consensus 27 gk~vlVTGas~-gI--G~aia~~la~~G~~V~~~~r~ 60 (266)
T 3grp_A 27 GRKALVTGATG-GI--GEAIARCFHAQGAIVGLHGTR 60 (266)
T ss_dssp TCEEEESSTTS-HH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCc-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 36788885554 33 467899999999999888643
No 293
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=21.85 E-value=82 Score=29.68 Aligned_cols=37 Identities=8% Similarity=-0.045 Sum_probs=29.0
Q ss_pred CcEEEEEcCCCCC-C---HHHHHHHHHHH-HHCCCeEEEEeC
Q 011490 8 QLHFILFPFLAQG-H---MIPMIDIARLL-AQHGALVTIVTT 44 (484)
Q Consensus 8 ~~kil~~~~~~~G-H---v~P~l~La~~L-~~rGh~V~~~~~ 44 (484)
++||+++..+..+ | +.....+.++| .++||+|+.+..
T Consensus 3 k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 3 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 6799999766444 3 34578899999 999999999854
No 294
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=21.75 E-value=50 Score=28.51 Aligned_cols=28 Identities=14% Similarity=0.112 Sum_probs=21.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEE
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIV 42 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~ 42 (484)
.|+++=.|-. -+.+|..|+++||+|+++
T Consensus 4 dV~IIGaGpa-----GL~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 4 PIAIIGTGIA-----GLSAAQALTAAGHQVHLF 31 (336)
T ss_dssp CEEEECCSHH-----HHHHHHHHHHTTCCEEEE
T ss_pred CEEEECcCHH-----HHHHHHHHHHCCCCEEEE
Confidence 3555544433 388999999999999998
No 295
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=21.74 E-value=24 Score=18.37 Aligned_cols=17 Identities=35% Similarity=0.735 Sum_probs=13.5
Q ss_pred chhhHHHHHHcCCCEec
Q 011490 367 GWNSVLEAVSNGLPMVT 383 (484)
Q Consensus 367 G~~s~~eal~~GvP~l~ 383 (484)
|.|+++-.|..|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888888888888664
No 296
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=21.67 E-value=1e+02 Score=27.12 Aligned_cols=33 Identities=21% Similarity=0.142 Sum_probs=23.8
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|+++++-. .|-+ -..+|+.|+++|++|+++.-.
T Consensus 7 k~vlITGa-s~gI--G~aia~~l~~~G~~V~~~~r~ 39 (263)
T 2a4k_A 7 KTILVTGA-ASGI--GRAALDLFAREGASLVAVDRE 39 (263)
T ss_dssp CEEEEEST-TSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC-CCHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 56677644 3433 467899999999999988643
No 297
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=21.65 E-value=77 Score=23.38 Aligned_cols=53 Identities=6% Similarity=0.112 Sum_probs=34.6
Q ss_pred CCccCHHHHHHHHHHHh----cCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHhh
Q 011490 422 GVPVKKEDVKKAINMLM----DEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDILQQ 482 (484)
Q Consensus 422 ~~~~~~~~l~~ai~~vl----~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 482 (484)
+|.++.++|++.++.-+ .++ . .-..+.+.+++. +..|.+...+++|+..+.+.
T Consensus 26 ~G~Is~~EL~~~l~~~l~~~lg~~-----~--~~~ev~~~i~~~-D~dgDG~Idf~EF~~~~~~~ 82 (101)
T 3nso_A 26 KYKLCQAELKELLQKELATWTPTE-----F--RECDYNKFMSVL-DTNKDCEVDFVEYVRSLACL 82 (101)
T ss_dssp TTEECHHHHHHHHHHHTTTCCCCT-----T--CHHHHHHHHHHH-HHCCCSCEEHHHHHHHHHHH
T ss_pred CCEECHHHHHHHHHHHhhhhcCCC-----C--CHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHH
Confidence 37899999999998643 221 0 123444555544 66677778888888877654
No 298
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=21.49 E-value=1.5e+02 Score=18.78 Aligned_cols=51 Identities=14% Similarity=0.053 Sum_probs=32.3
Q ss_pred CCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHH
Q 011490 421 NGVPVKKEDVKKAINMLMDEGEERDERRRRAREYGETAKTAIEEGGSSYLNIKLLIKDIL 480 (484)
Q Consensus 421 ~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 480 (484)
++|.++.+++...++.+-. .. ....+.+.++.. +..|......++|++.+.
T Consensus 13 ~~G~i~~~e~~~~l~~~~~------~~--~~~~~~~~~~~~-D~~~~g~i~~~ef~~~~~ 63 (66)
T 3li6_A 13 GDGAVSYEEVKAFVSKKRA------IK--NEQLLQLIFKSI-DADGNGEIDQNEFAKFYG 63 (66)
T ss_dssp CSSSCCHHHHHHHHHHHHH------HH--HHHHHHHHHHHH-CTTCSSSCCHHHHHHHHT
T ss_pred CCCcccHHHHHHHHHHccC------CC--cHHHHHHHHHHH-CCCCCCCCCHHHHHHHHH
Confidence 4678999999999987632 11 223444455443 556666667777777654
No 299
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=21.48 E-value=2e+02 Score=23.04 Aligned_cols=37 Identities=8% Similarity=0.111 Sum_probs=29.7
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
++||+|+.++.. ...-+......|.+.|++|.++++.
T Consensus 2 ~~ki~il~~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~ 38 (168)
T 3l18_A 2 SMKVLFLSADGF-EDLELIYPLHRIKEEGHEVYVASFQ 38 (168)
T ss_dssp CCEEEEECCTTB-CHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEEeCCCc-cHHHHHHHHHHHHHCCCEEEEEECC
Confidence 578999998765 4455667778888999999999875
No 300
>2cob_A LCOR protein; MLR2, KIAA1795, helix-turn-helix, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.1.15
Probab=21.44 E-value=95 Score=21.28 Aligned_cols=31 Identities=16% Similarity=0.145 Sum_probs=21.8
Q ss_pred CCCccCHHHHHHHHHHHhcCChhHHHHHHHHHHH
Q 011490 421 NGVPVKKEDVKKAINMLMDEGEERDERRRRAREY 454 (484)
Q Consensus 421 ~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l 454 (484)
+....++++|.+||..|.++. -+++..|+..
T Consensus 10 ryr~Yte~~L~~Ai~aVr~g~---mS~~~Aak~y 40 (70)
T 2cob_A 10 RYRQYNSEILEEAISVVMSGK---MSVSKAQSIY 40 (70)
T ss_dssp CSCCCCHHHHHHHHHHHHTTS---SCHHHHHHHH
T ss_pred cccccCHHHHHHHHHHHHcCC---ccHHHHHHHh
Confidence 446799999999999998762 1444444443
No 301
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=21.40 E-value=4e+02 Score=24.51 Aligned_cols=109 Identities=16% Similarity=0.094 Sum_probs=58.9
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHhC-CCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCc
Q 011490 281 AVYVCLGSLCDSSTRQLIELGLGLEAT-KKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAI 359 (484)
Q Consensus 281 ~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~ 359 (484)
+..|++|.++. ..+.++... +.+++.+...+. +.. +.....++ .-|-...++|..+++
T Consensus 8 vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~-----------~~~-~~a~~~g~--~~~~~~~~ll~~~~~ 66 (359)
T 3e18_A 8 LVIVGYGGMGS-------YHVTLASAADNLEVHGVFDILA-----------EKR-EAAAQKGL--KIYESYEAVLADEKV 66 (359)
T ss_dssp EEEECCSHHHH-------HHHHHHHTSTTEEEEEEECSSH-----------HHH-HHHHTTTC--CBCSCHHHHHHCTTC
T ss_pred EEEECcCHHHH-------HHHHHHHhCCCcEEEEEEcCCH-----------HHH-HHHHhcCC--ceeCCHHHHhcCCCC
Confidence 78888887663 234455554 455555554321 111 11122343 234567788876665
Q ss_pred cccccccchh----hHHHHHHcCCCEec-ccccc--chhhHHHHHHHHhcceeEeccC
Q 011490 360 GGFLTHCGWN----SVLEAVSNGLPMVT-WPFFA--DQFCNEKLVVQVLRIGVTIGAE 410 (484)
Q Consensus 360 ~~~I~HgG~~----s~~eal~~GvP~l~-~P~~~--DQ~~na~~~~e~~G~g~~l~~~ 410 (484)
.+++--.-.. -+.+|+.+|++++| =|+.. ++-.--..++++.|+-+.+...
T Consensus 67 D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~ 124 (359)
T 3e18_A 67 DAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQN 124 (359)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECG
T ss_pred CEEEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEee
Confidence 5566443333 46788999999887 35433 3433222333577776665443
No 302
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=21.20 E-value=1e+02 Score=26.66 Aligned_cols=36 Identities=3% Similarity=-0.033 Sum_probs=28.9
Q ss_pred CcEEEEEcCC--CCCCHHHHHHHHHHHHHCCCeEEEEe
Q 011490 8 QLHFILFPFL--AQGHMIPMIDIARLLAQHGALVTIVT 43 (484)
Q Consensus 8 ~~kil~~~~~--~~GHv~P~l~La~~L~~rGh~V~~~~ 43 (484)
++|.+|++.. .-|-..=...|++.|+++|++|.++=
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 4555555443 66899999999999999999999984
No 303
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=21.07 E-value=1e+02 Score=26.72 Aligned_cols=36 Identities=22% Similarity=0.212 Sum_probs=28.7
Q ss_pred EEEEEc--CCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFP--FLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~--~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|++.+. -++-|-..=...||..|+++|+.|.++=..
T Consensus 3 ~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (260)
T 3q9l_A 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFA 40 (260)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 344443 347799999999999999999999998544
No 304
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=21.03 E-value=1.2e+02 Score=26.55 Aligned_cols=33 Identities=18% Similarity=0.165 Sum_probs=24.7
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|+++++-++. -+ -.++|++|+++|++|+++.-.
T Consensus 11 k~vlVTGas~-gI--G~aia~~l~~~G~~V~~~~r~ 43 (262)
T 3pk0_A 11 RSVVVTGGTK-GI--GRGIATVFARAGANVAVAGRS 43 (262)
T ss_dssp CEEEETTCSS-HH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCc-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 6788885543 33 467899999999999887643
No 305
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=20.99 E-value=3.4e+02 Score=24.88 Aligned_cols=109 Identities=13% Similarity=0.151 Sum_probs=59.4
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHhC-CCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCc
Q 011490 281 AVYVCLGSLCDSSTRQLIELGLGLEAT-KKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAI 359 (484)
Q Consensus 281 ~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~ 359 (484)
+.+|++|.++ ...+.++.+. +..++.+...+.. -...+.++. ++. .+-...+++..+++
T Consensus 8 vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~~~~--------~~~~~~~~~---g~~--~~~~~~~~l~~~~~ 67 (354)
T 3db2_A 8 VAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSRTED--------KREKFGKRY---NCA--GDATMEALLAREDV 67 (354)
T ss_dssp EEEECCSHHH-------HHHHHHHTTCSSEEEEEEECSSHH--------HHHHHHHHH---TCC--CCSSHHHHHHCSSC
T ss_pred EEEEccCHHH-------HHHHHHHHhCCCcEEEEEECCCHH--------HHHHHHHHc---CCC--CcCCHHHHhcCCCC
Confidence 7888888765 2355666665 5666655544311 112222222 221 25566778855444
Q ss_pred cccccccc----hhhHHHHHHcCCCEec-ccccc--chhh-HHHHHHHHhcceeEeccC
Q 011490 360 GGFLTHCG----WNSVLEAVSNGLPMVT-WPFFA--DQFC-NEKLVVQVLRIGVTIGAE 410 (484)
Q Consensus 360 ~~~I~HgG----~~s~~eal~~GvP~l~-~P~~~--DQ~~-na~~~~e~~G~g~~l~~~ 410 (484)
.+++---- ..-+.+++.+|+++++ -|+.. ++-. ....+ ++.|+-+.+...
T Consensus 68 D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a-~~~~~~~~v~~~ 125 (354)
T 3db2_A 68 EMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVI-KETGVKFLCGHS 125 (354)
T ss_dssp CEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHH-HHHCCCEEEECG
T ss_pred CEEEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHH-HHcCCeEEEeec
Confidence 44553222 3456788999999887 36543 3433 33334 577776666554
No 306
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=20.81 E-value=1.3e+02 Score=24.81 Aligned_cols=37 Identities=16% Similarity=-0.029 Sum_probs=25.4
Q ss_pred cEEEEEcCC-----CCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFL-----AQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~-----~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
..++++.+| +...-.-+..+++.|+++|+.|..+-.+
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 78 (220)
T 2fuk_A 37 PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFR 78 (220)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCT
T ss_pred cCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecC
Confidence 455555555 3334455788999999999998876543
No 307
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=20.77 E-value=86 Score=26.88 Aligned_cols=36 Identities=17% Similarity=0.020 Sum_probs=28.3
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
..+++.++..|+..-+..+++.|.++|++|..+-.+
T Consensus 27 ~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 62 (286)
T 3qit_A 27 PVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLF 62 (286)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CEEEEECCCCcccchHHHHHHHhhhcCeEEEEECCC
Confidence 456666677777777889999999999999887544
No 308
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=20.76 E-value=1.3e+02 Score=27.15 Aligned_cols=34 Identities=18% Similarity=0.163 Sum_probs=24.1
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
.++|++. |+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 11 ~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 11 GSLVLVT--GANGFVA--SHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEE--CCccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 3455443 5566653 56889999999999988653
No 309
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=20.74 E-value=94 Score=27.30 Aligned_cols=38 Identities=18% Similarity=0.245 Sum_probs=30.9
Q ss_pred CcEEEEEcCC--CCCCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 011490 8 QLHFILFPFL--AQGHMIPMIDIARLLAQHGALVTIVTTPM 46 (484)
Q Consensus 8 ~~kil~~~~~--~~GHv~P~l~La~~L~~rGh~V~~~~~~~ 46 (484)
++|++.+..+ +-|=..=...||..|+ +|+.|.++-...
T Consensus 26 ~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~ 65 (267)
T 3k9g_A 26 KPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDT 65 (267)
T ss_dssp CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECT
T ss_pred CCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCC
Confidence 5677777555 7788999999999999 999999995443
No 310
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=20.72 E-value=33 Score=29.41 Aligned_cols=32 Identities=16% Similarity=0.122 Sum_probs=23.5
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|||+++-. |.+ -..+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~---G~~--G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGG---ETT--AYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECC---HHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CHH--HHHHHHHHHhCCCeEEEEECC
Confidence 35666653 433 457899999999999998753
No 311
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=20.69 E-value=1.6e+02 Score=24.96 Aligned_cols=45 Identities=11% Similarity=-0.023 Sum_probs=30.6
Q ss_pred ccccCCCCCCcEEEEecCCCccCCHHHHHHHHHHHHhCCCCEEEE
Q 011490 270 LKWLDSWQPGSAVYVCLGSLCDSSTRQLIELGLGLEATKKPFIWV 314 (484)
Q Consensus 270 ~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 314 (484)
.+|+.....+.++||..+|......+.+....++++++|+.+.+.
T Consensus 19 ~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 19 TEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 345533334569999988764333456777899999999876554
No 312
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=20.66 E-value=85 Score=29.11 Aligned_cols=36 Identities=17% Similarity=0.213 Sum_probs=24.0
Q ss_pred HHHHHHHhcCCCCeEEEecCCCc-chHHHHHHcCCCcEEE
Q 011490 108 PLETLFKEIQPKPSCLISDVCLP-WTVSSACKFNVPRIVF 146 (484)
Q Consensus 108 ~l~~~l~~~~~~~D~vI~D~~~~-~a~~~A~~lgIP~v~~ 146 (484)
.++.+++- +||+||...... ......+.+|||++.+
T Consensus 88 n~E~Ilal---~PDLIi~~~~~~~~~~~~~~~~GiPvv~~ 124 (346)
T 2etv_A 88 DLESLITL---QPDVVFITYVDRXTAXDIQEXTGIPVVVL 124 (346)
T ss_dssp CHHHHHHH---CCSEEEEESCCHHHHHHHHHHHTSCEEEE
T ss_pred CHHHHhcC---CCCEEEEeCCccchHHHHHHhcCCcEEEE
Confidence 34555554 999999876432 1233457789999986
No 313
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=20.50 E-value=1.5e+02 Score=25.78 Aligned_cols=33 Identities=21% Similarity=0.119 Sum_probs=23.3
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|.++++ |+.|-+ -..|++.|+++|++|+++.-.
T Consensus 8 k~vlIT-Gasggi--G~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 8 ALALVT-GAGSGI--GRAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp CEEEEE-TTTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE-CCCChH--HHHHHHHHHHCCCEEEEEeCC
Confidence 455666 444433 367899999999999988643
No 314
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=20.47 E-value=1.7e+02 Score=25.54 Aligned_cols=40 Identities=25% Similarity=0.145 Sum_probs=25.8
Q ss_pred CCCCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 1 MASQAGSQLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 1 m~~~~~~~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|+.|.+ . |+++++- +.|-+ -..+++.|+++||+|+++.-.
T Consensus 1 M~~m~~-~-k~vlVTG-as~gI--G~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 1 MAHMVN-G-KVALVTG-AAQGI--GRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp -CCCCT-T-CEEEEET-TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCcccC-C-CEEEEEC-CCCcH--HHHHHHHHHHCCCEEEEEECC
Confidence 555533 2 4566664 34433 467899999999999987643
No 315
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=20.45 E-value=4.8e+02 Score=23.64 Aligned_cols=109 Identities=15% Similarity=0.179 Sum_probs=59.4
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHhC-CCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCc
Q 011490 281 AVYVCLGSLCDSSTRQLIELGLGLEAT-KKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAI 359 (484)
Q Consensus 281 ~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~ 359 (484)
+.+|++|.++. ..+.++.+. +..++.+...+.. ....+.. .-++ .-+-...+++..+++
T Consensus 7 vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~~--------~~~~~a~---~~g~--~~~~~~~~~l~~~~~ 66 (344)
T 3euw_A 7 IALFGAGRIGH-------VHAANIAANPDLELVVIADPFIE--------GAQRLAE---ANGA--EAVASPDEVFARDDI 66 (344)
T ss_dssp EEEECCSHHHH-------HHHHHHHHCTTEEEEEEECSSHH--------HHHHHHH---TTTC--EEESSHHHHTTCSCC
T ss_pred EEEECCcHHHH-------HHHHHHHhCCCcEEEEEECCCHH--------HHHHHHH---HcCC--ceeCCHHHHhcCCCC
Confidence 77888887653 345556554 5565555543310 1111211 1122 234456778885555
Q ss_pred cccccccchh----hHHHHHHcCCCEec-ccccc--chh-hHHHHHHHHhcceeEeccC
Q 011490 360 GGFLTHCGWN----SVLEAVSNGLPMVT-WPFFA--DQF-CNEKLVVQVLRIGVTIGAE 410 (484)
Q Consensus 360 ~~~I~HgG~~----s~~eal~~GvP~l~-~P~~~--DQ~-~na~~~~e~~G~g~~l~~~ 410 (484)
.++|----.. -+.+++.+|+++++ -|+.. ++- .....+ ++.|+-+.+...
T Consensus 67 D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a-~~~g~~~~v~~~ 124 (344)
T 3euw_A 67 DGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKI-GDGASKVMLGFN 124 (344)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHH-GGGGGGEEECCG
T ss_pred CEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHH-HhcCCeEEecch
Confidence 4466443333 46788999999887 36543 332 233344 577776666544
No 316
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=20.38 E-value=1.3e+02 Score=22.79 Aligned_cols=65 Identities=12% Similarity=0.081 Sum_probs=45.1
Q ss_pred cCCCCccccccccchhh---------HHHHHHcCCCEeccccccchhhHHHHHHHHhcceeEeccCCCCCCcccccCCCc
Q 011490 354 LSHPAIGGFLTHCGWNS---------VLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVP 424 (484)
Q Consensus 354 l~~~~~~~~I~HgG~~s---------~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~ 424 (484)
+..+++ +|-.+|..| +..|...|+|++++=-++.+. .-..+ ++.+..+. .
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l-~~~a~~iV-----------------~ 94 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPEL-EAVSSEVV-----------------G 94 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTH-HHHCSEEE-----------------C
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHH-HhhCceec-----------------c
Confidence 456777 999999887 567888999999887776552 11224 34343332 3
Q ss_pred cCHHHHHHHHHHHhc
Q 011490 425 VKKEDVKKAINMLMD 439 (484)
Q Consensus 425 ~~~~~l~~ai~~vl~ 439 (484)
.+.+.|.++|+..++
T Consensus 95 Wn~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 95 WNPHCIRDALEDALD 109 (111)
T ss_dssp SCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHhccC
Confidence 788999999988764
No 317
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=20.37 E-value=1.2e+02 Score=27.39 Aligned_cols=33 Identities=15% Similarity=0.081 Sum_probs=24.4
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|+++++-.+ |-+ -..+|++|+++|++|.++.-.
T Consensus 32 k~vlVTGas-~gI--G~~la~~l~~~G~~V~~~~r~ 64 (301)
T 3tjr_A 32 RAAVVTGGA-SGI--GLATATEFARRGARLVLSDVD 64 (301)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-CHH--HHHHHHHHHHCCCEEEEEECC
Confidence 677777544 433 467899999999999887643
No 318
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=20.35 E-value=1.2e+02 Score=24.58 Aligned_cols=27 Identities=26% Similarity=0.267 Sum_probs=22.7
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHhC
Q 011490 281 AVYVCLGSLCDSSTRQLIELGLGLEAT 307 (484)
Q Consensus 281 ~V~vs~GS~~~~~~~~~~~~~~al~~~ 307 (484)
.+|+++||........+...+.+++..
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~ 29 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHL 29 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTC
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcC
Confidence 489999998877778888888888875
No 319
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=20.34 E-value=70 Score=29.48 Aligned_cols=37 Identities=14% Similarity=0.182 Sum_probs=24.0
Q ss_pred HHHHHHHhcCCCCeEEEecCCCcchHHHHHHcCCCcEEEe
Q 011490 108 PLETLFKEIQPKPSCLISDVCLPWTVSSACKFNVPRIVFH 147 (484)
Q Consensus 108 ~l~~~l~~~~~~~D~vI~D~~~~~a~~~A~~lgIP~v~~~ 147 (484)
.++.+++ .+||+||..........--++.|||++.+.
T Consensus 108 n~E~i~a---l~PDLIi~~~~~~~~~~~L~~~gipvv~~~ 144 (335)
T 4hn9_A 108 NTEACVA---ATPDVVFLPMKLKKTADTLESLGIKAVVVN 144 (335)
T ss_dssp CHHHHHH---TCCSEEEEEGGGHHHHHHHHHTTCCEEEEC
T ss_pred CHHHHHh---cCCCEEEEeCcchhHHHHHHHcCCCEEEEc
Confidence 3455554 499999987643223333456799999864
No 320
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=20.34 E-value=1.6e+02 Score=25.82 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=24.9
Q ss_pred EEEEEcCCC-CCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFPFLA-QGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~~~~-~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
|+++++-.+ .|-+ -.++|+.|+++|++|+++.-.
T Consensus 8 k~vlVTGa~~s~gI--G~aia~~l~~~G~~V~~~~r~ 42 (269)
T 2h7i_A 8 KRILVSGIITDSSI--AFHIARVAQEQGAQLVLTGFD 42 (269)
T ss_dssp CEEEECCCSSTTSH--HHHHHHHHHHTTCEEEEEECS
T ss_pred CEEEEECCCCCCch--HHHHHHHHHHCCCEEEEEecC
Confidence 577777551 4544 468899999999999887643
No 321
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=20.31 E-value=81 Score=28.01 Aligned_cols=37 Identities=22% Similarity=0.253 Sum_probs=30.9
Q ss_pred CcEEEEEcCC---CCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 8 QLHFILFPFL---AQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 8 ~~kil~~~~~---~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
++|.+|++-+ +.|-=.-.-.|+..|++||+.|+..--
T Consensus 22 ~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~Ki 61 (294)
T 2c5m_A 22 SMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKI 61 (294)
T ss_dssp CCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEE
T ss_pred ceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEec
Confidence 6799999987 456667778999999999999998753
No 322
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=20.30 E-value=3.4e+02 Score=21.77 Aligned_cols=95 Identities=15% Similarity=0.066 Sum_probs=61.5
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHC--CCeEEEEeCCCchhhhhH-HHhhcccCCCceEEEEeeCCCccCCCCCCCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQH--GALVTIVTTPMNAARFQN-VIERGIQSGLRIQVIEFYFPCQEVGLPEGCE 84 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~r--Gh~V~~~~~~~~~~~v~~-~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~ 84 (484)
+.+|++... ..+=.-++.+|+.|++. ||++. ++....+.+++ . |+....+- ..+++
T Consensus 11 ~g~V~lsv~--D~dK~~~v~~ak~~~~ll~Gf~l~--AT~gTa~~L~e~~---------Gl~v~~v~------k~~eG-- 69 (152)
T 1b93_A 11 RKHIALVAH--DHCKQMLMSWVERHQPLLEQHVLY--ATGTTGNLISRAT---------GMNVNAML------SGPMG-- 69 (152)
T ss_dssp SCEEEEEEC--GGGHHHHHHHHHHTHHHHTTSEEE--EETTHHHHHHHHH---------CCCCEEEC------CGGGT--
T ss_pred CCEEEEEEe--hhhHHHHHHHHHHHHHHhCCCEEE--EccHHHHHHHHHh---------CceeEEEE------ecCCC--
Confidence 456776655 56778899999999999 99654 45555555655 3 34433321 01110
Q ss_pred ccCCCCccchHHHHHHHHHHchHHHHHHHHhcCCCCeEEEecCC--Cc-c-------hHHHHHHcCCCcEE
Q 011490 85 SWDKLPSMALLPKFFAAIEMLRLPLETLFKEIQPKPSCLISDVC--LP-W-------TVSSACKFNVPRIV 145 (484)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~D~vI~D~~--~~-~-------a~~~A~~lgIP~v~ 145 (484)
-.+.+.+.+++ .+.|+||...- .. . ...+|-..+||+++
T Consensus 70 --------------------G~p~I~d~I~~--geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 118 (152)
T 1b93_A 70 --------------------GDQQVGALISE--GKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVAT 118 (152)
T ss_dssp --------------------HHHHHHHHHHT--TCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEES
T ss_pred --------------------CCchHHHHHHC--CCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEe
Confidence 12356777888 89999996443 21 1 34688889999886
No 323
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=20.18 E-value=3e+02 Score=24.45 Aligned_cols=33 Identities=21% Similarity=0.120 Sum_probs=25.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTT 44 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~ 44 (484)
.|+++++-++.| =-.++|+.|+++|++|.++..
T Consensus 28 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 60 (299)
T 3t7c_A 28 GKVAFITGAARG---QGRSHAITLAREGADIIAIDV 60 (299)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEec
Confidence 367888865543 246889999999999998754
No 324
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=20.14 E-value=1.1e+02 Score=27.55 Aligned_cols=103 Identities=13% Similarity=0.125 Sum_probs=64.3
Q ss_pred HHHHHHHHhCCCCEEEEEeCCCCCCCchhhhhhhHHHHHhcCCCeEeeCcCChhhhcCCCCccccccccchhhHHHHHHc
Q 011490 298 IELGLGLEATKKPFIWVIRPGDQAKGLEDWLLAEKFEERIEGRGLLIRGWAPQVVILSHPAIGGFLTHCGWNSVLEAVSN 377 (484)
Q Consensus 298 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~ 377 (484)
.++++.++..+..+++..+...- +|+.|.......-+-+ |+++ .=...|.+.+..|+.+
T Consensus 156 ~~~~~~l~~~~~Dlivlagy~~i--------l~~~~l~~~~~~~iNi-----------HpSl--LP~~rG~~p~~~A~~~ 214 (288)
T 3obi_A 156 AAITALIAQTHTDLVVLARYMQI--------LSDEMSARLAGRCINI-----------HHSF--LPGFKGAKPYHQAFDR 214 (288)
T ss_dssp HHHHHHHHHHTCCEEEESSCCSC--------CCHHHHHHTTTSEEEE-----------EEEC--SSCCCSSCHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEhhhhhhh--------CCHHHHhhhcCCeEEe-----------Cccc--ccCCCCchHHHHHHHc
Confidence 45788888888899988887642 6777765544332223 3443 4445689999999999
Q ss_pred CCCEecccccc--chhhHHHHHHHHhcceeEeccCCCCCCcccccCCCccCHHHHHHHHHHHh
Q 011490 378 GLPMVTWPFFA--DQFCNEKLVVQVLRIGVTIGAERPPSLADEERNGVPVKKEDVKKAINMLM 438 (484)
Q Consensus 378 GvP~l~~P~~~--DQ~~na~~~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl 438 (484)
|+....+-.+. +..+.+--+. + --+.+... -|.++|.+.+..+-
T Consensus 215 G~~~~G~Tvh~v~~~~D~GpIi~-Q--~~v~i~~~--------------dt~~~L~~r~~~~e 260 (288)
T 3obi_A 215 GVKLIGATAHYVTSALDEGPIID-Q--DVERISHR--------------DTPADLVRKGRDIE 260 (288)
T ss_dssp TCSEEEEEEEECCSSTTCSCEEE-E--EEEECCTT--------------CCHHHHHHHHHHHH
T ss_pred CCCEEEEEEEEECCCCcCCCeEE-E--EEEecCCC--------------CCHHHHHHHHHHHH
Confidence 99987776542 2333332221 1 12333333 57888888776554
No 325
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=20.14 E-value=2.3e+02 Score=21.14 Aligned_cols=36 Identities=17% Similarity=0.064 Sum_probs=29.3
Q ss_pred CcEEEEEcCCCCCCHHH-HHHHHHHHHHCCCeEEEEe
Q 011490 8 QLHFILFPFLAQGHMIP-MIDIARLLAQHGALVTIVT 43 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P-~l~La~~L~~rGh~V~~~~ 43 (484)
.+||++++..+.|.-.= .-.|-+.+.++|.++.+-.
T Consensus 21 ~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 21 KRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp SEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 57899999999999774 6778888889999865544
No 326
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=20.13 E-value=2.2e+02 Score=23.37 Aligned_cols=37 Identities=5% Similarity=0.065 Sum_probs=29.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 8 QLHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 8 ~~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
.+||+++.++... ..-+......|.+.|++|.++++.
T Consensus 9 ~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (190)
T 2vrn_A 9 GKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLE 45 (190)
T ss_dssp TCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecC
Confidence 5789999886553 456677778899999999999865
No 327
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=20.11 E-value=1.1e+02 Score=27.24 Aligned_cols=34 Identities=21% Similarity=0.023 Sum_probs=25.5
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 9 LHFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 9 ~kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
-|+++++-++.| + -.++|+.|+++|++|.++.-.
T Consensus 30 ~k~vlVTGas~G-I--G~aia~~l~~~G~~Vi~~~r~ 63 (281)
T 3ppi_A 30 GASAIVSGGAGG-L--GEATVRRLHADGLGVVIADLA 63 (281)
T ss_dssp TEEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 477888865543 3 468899999999999887643
No 328
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=20.03 E-value=96 Score=25.21 Aligned_cols=27 Identities=22% Similarity=0.210 Sum_probs=21.5
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHhC
Q 011490 281 AVYVCLGSLCDSSTRQLIELGLGLEAT 307 (484)
Q Consensus 281 ~V~vs~GS~~~~~~~~~~~~~~al~~~ 307 (484)
.+|+++||........+...+.++...
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~ 28 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDI 28 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcC
Confidence 589999998765667777788888765
No 329
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=20.02 E-value=62 Score=27.57 Aligned_cols=36 Identities=22% Similarity=0.162 Sum_probs=26.8
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011490 10 HFILFPFLAQGHMIPMIDIARLLAQHGALVTIVTTP 45 (484)
Q Consensus 10 kil~~~~~~~GHv~P~l~La~~L~~rGh~V~~~~~~ 45 (484)
+.+++.+|..|+..-+..++..|+++|++|..+--+
T Consensus 5 ~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 40 (258)
T 3dqz_A 5 HHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELA 40 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCT
T ss_pred CcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCC
Confidence 344555566677777889999999999998877544
Done!