BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011492
(484 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255544860|ref|XP_002513491.1| GTP-binding protein enga, putative [Ricinus communis]
gi|223547399|gb|EEF48894.1| GTP-binding protein enga, putative [Ricinus communis]
Length = 624
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 309/379 (81%), Positives = 352/379 (92%), Gaps = 3/379 (0%)
Query: 101 SDGQDFGIDVDALEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPE 160
SD D+ ID+DALE+EA+D VREYS+ LSRQL I+D++DD+K++ +KQK++K TI ++P+
Sbjct: 79 SDSDDYAIDIDALEQEAEDVVREYSTSLSRQLRIEDDSDDKKET-RKQKRQKFTIPDIPD 137
Query: 161 HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG 220
+LLPRVAIVGRPNVGKSALFNRLVGGN+AIVVDEPGVTRDR+YGRSFWG+ EFM+VDTGG
Sbjct: 138 NLLPRVAIVGRPNVGKSALFNRLVGGNKAIVVDEPGVTRDRLYGRSFWGDFEFMVVDTGG 197
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
VL +S+SQ N+MEDLAITTTIGM+GIPLA+REAAVARMPSMIERQA AA+EES VIIFLV
Sbjct: 198 VLTISQSQDNVMEDLAITTTIGMDGIPLASREAAVARMPSMIERQAAAAVEESSVIIFLV 257
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAIS 340
DGQAGL AAD EIADWLRKNY +KFIILAVNKCESP+KGIMQ +EFWSLG SP+PISA+S
Sbjct: 258 DGQAGLIAADIEIADWLRKNYSNKFIILAVNKCESPKKGIMQAAEFWSLGLSPIPISALS 317
Query: 341 GTGTGELLDLVCSELKKVEGTEDL-VEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
GTGTGELLDLVCS+L KVE ++ L EE+N +PAIAIVGRPNVGKSSILNALVGEDRTIV
Sbjct: 318 GTGTGELLDLVCSQLAKVEVSKHLDNEEQNYVPAIAIVGRPNVGKSSILNALVGEDRTIV 377
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SPISGTTRDAIDTEF+GP+GQKFRLIDTAGIR+RAA+ASSGS TEALSVNRAFRAIRRSD
Sbjct: 378 SPISGTTRDAIDTEFSGPDGQKFRLIDTAGIRRRAAVASSGSLTEALSVNRAFRAIRRSD 437
Query: 460 VVALVIEAMACITEQADWR 478
VVALVIEAMACITEQ D+R
Sbjct: 438 VVALVIEAMACITEQ-DFR 455
>gi|359478737|ref|XP_002282837.2| PREDICTED: GTPase Der-like [Vitis vinifera]
Length = 676
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 305/381 (80%), Positives = 344/381 (90%), Gaps = 2/381 (0%)
Query: 99 DESDGQDFGIDVDALEREAKDAVREYSSLLSRQLIIQ-DETDDRKDSGKKQKKRKTTIGN 157
+E + + +DVDALE EAK AVREYS LSRQL I+ D ++ K G KQKK K+T N
Sbjct: 107 EEVANRSYSLDVDALEEEAKHAVREYSRFLSRQLSIEEDGANELKGRGGKQKKSKSTTRN 166
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+P+HLLPRV IVGRPNVGKSALFNRLVGGN+AIVVDEPGVTRDR+YGR+FWG++EFM++D
Sbjct: 167 IPDHLLPRVTIVGRPNVGKSALFNRLVGGNKAIVVDEPGVTRDRLYGRAFWGDYEFMVID 226
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
TGGVL +SKSQ N+ME+LAIT TIGM+GIPLA+REAAVARMP+MIE+QATAAIEES VII
Sbjct: 227 TGGVLTISKSQDNVMEELAITKTIGMDGIPLASREAAVARMPTMIEKQATAAIEESSVII 286
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPIS 337
FLVDGQAGL+AAD EIADWLRKNY +K I+LAVNKCESP+KGIMQ EFWSLGF+PLPIS
Sbjct: 287 FLVDGQAGLSAADVEIADWLRKNYSNKCIVLAVNKCESPKKGIMQALEFWSLGFTPLPIS 346
Query: 338 AISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRT 397
A+SGTGTGELLDLVCS LKK+E E+L EEN +PAIAIVGRPNVGKSSILNALVGEDRT
Sbjct: 347 AVSGTGTGELLDLVCSGLKKIEDPENLDGEENYVPAIAIVGRPNVGKSSILNALVGEDRT 406
Query: 398 IVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRR 457
IVSP+SGTTRDAIDTEFTGP+GQK+RLIDTAGIR+RAA+ASSGSTTEALSVNRAFRAIRR
Sbjct: 407 IVSPVSGTTRDAIDTEFTGPDGQKYRLIDTAGIRRRAAVASSGSTTEALSVNRAFRAIRR 466
Query: 458 SDVVALVIEAMACITEQADWR 478
SDVVALVIEAMACITEQ D+R
Sbjct: 467 SDVVALVIEAMACITEQ-DYR 486
>gi|449448728|ref|XP_004142117.1| PREDICTED: GTPase Der-like [Cucumis sativus]
Length = 660
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 317/397 (79%), Positives = 362/397 (91%), Gaps = 4/397 (1%)
Query: 82 DSPFEDEDDDAEYED---VDDESDGQDFGIDVDALEREAKDAVREYSSLLSRQLIIQDET 138
D+ F + DAE ED DDE D +D+ IDV+A E EAKD +REYSS LSR+LII DE
Sbjct: 72 DAGFPENYVDAEGEDPGEFDDEFDDEDYTIDVEAFEEEAKDVLREYSSSLSRELIIDDEL 131
Query: 139 DDRKDSGKKQKKRKTTIGNV-PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGV 197
D+ ++G+K+KKRKTT NV P+HLLPRVAIVGRPNVGKSA+FNRLVGGNRAIVVDEPGV
Sbjct: 132 SDQSETGRKKKKRKTTPRNVIPDHLLPRVAIVGRPNVGKSAMFNRLVGGNRAIVVDEPGV 191
Query: 198 TRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVAR 257
TRDR+YGRSFWG++EFM+VDTGGVL+VSK+Q +++E+LAI+TTIGM+GIPLA+REAAVAR
Sbjct: 192 TRDRLYGRSFWGDNEFMVVDTGGVLSVSKTQNDVIEELAISTTIGMDGIPLASREAAVAR 251
Query: 258 MPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPR 317
MPSMIERQATAA+EE+ V+IFLVDGQAGLTAADEEIADWLR+NY DKF ILAVNKCESPR
Sbjct: 252 MPSMIERQATAAVEEASVVIFLVDGQAGLTAADEEIADWLRRNYSDKFTILAVNKCESPR 311
Query: 318 KGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIV 377
KG+MQ SEFWSLGF+PLP+SA+SGTGTGELLDL+CS L+KVE +EDL EEE+ IPA+AIV
Sbjct: 312 KGMMQASEFWSLGFTPLPVSALSGTGTGELLDLLCSRLQKVESSEDLHEEEDYIPAVAIV 371
Query: 378 GRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIA 437
GRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTG +GQKFRLIDTAGIR+RAA+A
Sbjct: 372 GRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGQDGQKFRLIDTAGIRRRAAVA 431
Query: 438 SSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQ 474
SSGS TE+LSVNRAFRAIRRSDVVALVIEA+ACITEQ
Sbjct: 432 SSGSMTESLSVNRAFRAIRRSDVVALVIEALACITEQ 468
>gi|356542027|ref|XP_003539473.1| PREDICTED: GTPase Der-like [Glycine max]
Length = 632
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 310/380 (81%), Positives = 344/380 (90%), Gaps = 6/380 (1%)
Query: 98 DDESDGQDFGIDVDALEREAKDAVREYSSLLSRQLIIQDE-TDDRKDSGKKQKK--RKTT 154
DDE G+ +D+ ALE+EAKDAV YSS LS+ L I+DE DRK+S + ++K R+T
Sbjct: 63 DDEESGELDDLDLVALEQEAKDAVEAYSSSLSQILSIEDEEKSDRKESAQSRRKSPRRTK 122
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
I +P++LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDR+YGRS+WGEHEFM
Sbjct: 123 I--IPDNLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGEHEFM 180
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
+VDTGGV+ VSKSQ +ME+LAITTTIGM+GIPLA REAAVARMPSMIERQATAA+EES
Sbjct: 181 VVDTGGVITVSKSQATVMEELAITTTIGMDGIPLAVREAAVARMPSMIERQATAAVEESS 240
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL 334
VIIFLVDGQAGLTAADEEIADWLRKNY DK++ILAVNKCESPRK IMQ SEFWSLGF PL
Sbjct: 241 VIIFLVDGQAGLTAADEEIADWLRKNYSDKYVILAVNKCESPRKRIMQASEFWSLGFEPL 300
Query: 335 PISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGE 394
PISAISGTGTGELLDLVCS L+K+E + +LVEE+ +PAI+IVGRPNVGKSSILNALVGE
Sbjct: 301 PISAISGTGTGELLDLVCSGLQKIEESNNLVEEDY-VPAISIVGRPNVGKSSILNALVGE 359
Query: 395 DRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRA 454
DRTIVSPISGTTRDAIDTEFTGP+GQKF+LIDTAGIRKR AIAS+GSTTEALSVNRAFRA
Sbjct: 360 DRTIVSPISGTTRDAIDTEFTGPDGQKFQLIDTAGIRKRTAIASAGSTTEALSVNRAFRA 419
Query: 455 IRRSDVVALVIEAMACITEQ 474
IRRSDVVALVIEAMACITEQ
Sbjct: 420 IRRSDVVALVIEAMACITEQ 439
>gi|297829768|ref|XP_002882766.1| EMB2738 [Arabidopsis lyrata subsp. lyrata]
gi|297328606|gb|EFH59025.1| EMB2738 [Arabidopsis lyrata subsp. lyrata]
Length = 661
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/364 (75%), Positives = 324/364 (89%), Gaps = 2/364 (0%)
Query: 113 LEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRP 172
LE+EA+D VR+Y+++LSR+L ++DET + K++ +K K+ +PEHLL RVAIVGRP
Sbjct: 106 LEKEARDIVRDYATILSRELKLEDETIEGKETRRKGKRLAKNTQQIPEHLLQRVAIVGRP 165
Query: 173 NVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIM 232
NVGKSALFNRLVG NRAIVVDEPGVTRDR+YGRS+WG+ EF++VDTGGV+ VSKS +M
Sbjct: 166 NVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQEFVVVDTGGVMTVSKSPSGVM 225
Query: 233 EDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEE 292
E+L ++TTIGMEGIPL++REAA+ARMPSMIE+QATAA++ES VIIF+VDGQAG + AD E
Sbjct: 226 EELNVSTTIGMEGIPLSSREAAIARMPSMIEKQATAAVDESAVIIFVVDGQAGSSGADVE 285
Query: 293 IADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVC 352
IADWLRK Y K+IILAVNKCESPRKG+MQ SEFWSLGF+P+PISA+SGTGTGELLDLVC
Sbjct: 286 IADWLRKYYSHKYIILAVNKCESPRKGLMQASEFWSLGFTPIPISALSGTGTGELLDLVC 345
Query: 353 SELKKVEGTEDLVEEENR--IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI 410
S L K+E E++ EEE IPAIAI+GRPNVGKSSILNALV EDRTIVSP+SGTTRDAI
Sbjct: 346 SGLNKIEIMENIEEEEEENYIPAIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAI 405
Query: 411 DTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMAC 470
D EFTGP+G+KFRLIDTAGIRK++++ASSGSTTEA+SVNRAFRAIRRSDVVALVIEAMAC
Sbjct: 406 DAEFTGPDGEKFRLIDTAGIRKKSSVASSGSTTEAMSVNRAFRAIRRSDVVALVIEAMAC 465
Query: 471 ITEQ 474
ITEQ
Sbjct: 466 ITEQ 469
>gi|145332365|ref|NP_001078139.1| GTP-binding protein [Arabidopsis thaliana]
gi|332641626|gb|AEE75147.1| GTP-binding protein [Arabidopsis thaliana]
Length = 587
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 275/364 (75%), Positives = 323/364 (88%), Gaps = 2/364 (0%)
Query: 113 LEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRP 172
LE+EA+D VR+Y++ LSR+L I+DET + K++ +K K+ +PEHLL RVAIVGRP
Sbjct: 108 LEKEARDIVRDYATTLSRELKIEDETIEGKETRRKGKRLAKNTQQIPEHLLQRVAIVGRP 167
Query: 173 NVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIM 232
NVGKSALFNRLVG NRAIVVDEPGVTRDR+YGRS+WG+ EF++VDTGGV+ VSKS +M
Sbjct: 168 NVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQEFVVVDTGGVMTVSKSPSGVM 227
Query: 233 EDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEE 292
E+L ++TTIGMEGIPL++REAA+ARMPSMIE+QATAA++ES VIIF+VDGQAG + AD E
Sbjct: 228 EELNVSTTIGMEGIPLSSREAAIARMPSMIEKQATAAVDESAVIIFVVDGQAGPSGADVE 287
Query: 293 IADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVC 352
IADWLRK Y K+IILAVNKCESPRKG+MQ SEFWSLGF+P+PISA+SGTGTGELLDLVC
Sbjct: 288 IADWLRKYYSHKYIILAVNKCESPRKGLMQASEFWSLGFTPIPISALSGTGTGELLDLVC 347
Query: 353 SELKKVEGTEDLVEEENR--IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI 410
S L K+E E++ EEE IPAIAI+GRPNVGKSSILNALV EDRTIVSP+SGTTRDAI
Sbjct: 348 SGLIKLEIMENIEEEEEENYIPAIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAI 407
Query: 411 DTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMAC 470
D EFTGP+G+KFRLIDTAGIRK++++ASSGSTTEA+SVNRAFRAIRRSDVVALVIEAMAC
Sbjct: 408 DAEFTGPDGEKFRLIDTAGIRKKSSVASSGSTTEAMSVNRAFRAIRRSDVVALVIEAMAC 467
Query: 471 ITEQ 474
ITEQ
Sbjct: 468 ITEQ 471
>gi|30682040|ref|NP_187815.2| GTP-binding protein [Arabidopsis thaliana]
gi|209529777|gb|ACI49783.1| At3g12080 [Arabidopsis thaliana]
gi|332641625|gb|AEE75146.1| GTP-binding protein [Arabidopsis thaliana]
Length = 663
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 275/364 (75%), Positives = 323/364 (88%), Gaps = 2/364 (0%)
Query: 113 LEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRP 172
LE+EA+D VR+Y++ LSR+L I+DET + K++ +K K+ +PEHLL RVAIVGRP
Sbjct: 108 LEKEARDIVRDYATTLSRELKIEDETIEGKETRRKGKRLAKNTQQIPEHLLQRVAIVGRP 167
Query: 173 NVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIM 232
NVGKSALFNRLVG NRAIVVDEPGVTRDR+YGRS+WG+ EF++VDTGGV+ VSKS +M
Sbjct: 168 NVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQEFVVVDTGGVMTVSKSPSGVM 227
Query: 233 EDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEE 292
E+L ++TTIGMEGIPL++REAA+ARMPSMIE+QATAA++ES VIIF+VDGQAG + AD E
Sbjct: 228 EELNVSTTIGMEGIPLSSREAAIARMPSMIEKQATAAVDESAVIIFVVDGQAGPSGADVE 287
Query: 293 IADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVC 352
IADWLRK Y K+IILAVNKCESPRKG+MQ SEFWSLGF+P+PISA+SGTGTGELLDLVC
Sbjct: 288 IADWLRKYYSHKYIILAVNKCESPRKGLMQASEFWSLGFTPIPISALSGTGTGELLDLVC 347
Query: 353 SELKKVEGTEDLVEEENR--IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI 410
S L K+E E++ EEE IPAIAI+GRPNVGKSSILNALV EDRTIVSP+SGTTRDAI
Sbjct: 348 SGLIKLEIMENIEEEEEENYIPAIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAI 407
Query: 411 DTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMAC 470
D EFTGP+G+KFRLIDTAGIRK++++ASSGSTTEA+SVNRAFRAIRRSDVVALVIEAMAC
Sbjct: 408 DAEFTGPDGEKFRLIDTAGIRKKSSVASSGSTTEAMSVNRAFRAIRRSDVVALVIEAMAC 467
Query: 471 ITEQ 474
ITEQ
Sbjct: 468 ITEQ 471
>gi|224106171|ref|XP_002314070.1| predicted protein [Populus trichocarpa]
gi|222850478|gb|EEE88025.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 281/322 (87%), Positives = 303/322 (94%), Gaps = 1/322 (0%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
+P+HLLP+VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDR+YGRSFWGEHEFM+V
Sbjct: 1 QIPDHLLPKVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSFWGEHEFMVV 60
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DTGGV+ VSKSQ N+MEDLAI+TTIGM+GIPLA+REAAVARMPSMIE+QATAA+EES VI
Sbjct: 61 DTGGVVTVSKSQANVMEDLAISTTIGMDGIPLASREAAVARMPSMIEKQATAAVEESSVI 120
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPI 336
IFLVDGQAGLTAAD EIADWLR+NY +K IILAVNKCESPRKGIMQ SEFWSLGFSPLPI
Sbjct: 121 IFLVDGQAGLTAADVEIADWLRRNYSNKCIILAVNKCESPRKGIMQASEFWSLGFSPLPI 180
Query: 337 SAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDR 396
SAISGTGTGELLDLVCS L KVE ++++ EEE IPAIAIVGRPNVGKSSILNALVGEDR
Sbjct: 181 SAISGTGTGELLDLVCSRLGKVEVSKNVNEEETYIPAIAIVGRPNVGKSSILNALVGEDR 240
Query: 397 TIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIR 456
TIVSPISGTTRDAIDTEF GP+GQKF LIDTAGIR+RAA+ASSGS TEALSVNRAFR IR
Sbjct: 241 TIVSPISGTTRDAIDTEFVGPDGQKFLLIDTAGIRRRAAVASSGSVTEALSVNRAFRGIR 300
Query: 457 RSDVVALVIEAMACITEQADWR 478
RSDVVALVIEAMACITEQ D+R
Sbjct: 301 RSDVVALVIEAMACITEQ-DYR 321
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 37/177 (20%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFM 214
N E +P +AIVGRPNVGKS++ N LVG +R IV G TRD + F G +F+
Sbjct: 209 NEEETYIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI-DTEFVGPDGQKFL 267
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE----RQATAAI 270
L+DT G+ R AAVA S+ E +A I
Sbjct: 268 LIDTAGI----------------------------RRRAAVASSGSVTEALSVNRAFRGI 299
Query: 271 EESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW 327
S V+ +++ A +T D IA+ + K K ++ VNK ++ Q + ++
Sbjct: 300 RRSDVVALVIEAMACITEQDYRIAERIEKE--GKGCLIVVNKWDTIPNKNQQTATYY 354
>gi|414591757|tpg|DAA42328.1| TPA: hypothetical protein ZEAMMB73_012049 [Zea mays]
Length = 653
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 262/369 (71%), Positives = 326/369 (88%), Gaps = 5/369 (1%)
Query: 107 GIDVDALEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIG-NVPEHLLPR 165
++V+A+E EA+ A + + L+R+L I D+ +++ + + KT++ ++P++LLP+
Sbjct: 99 AMNVEAMEEEARGAAADLAKRLARELHIDDDVREKR----RNIRDKTSVSKHIPDNLLPK 154
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+GRPNVGKSALFNRLVGGNRAIVVDEPGVTRDR+YGRS+WG+HEFM++DTGGV+ +S
Sbjct: 155 VAIIGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGDHEFMVIDTGGVITLS 214
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KSQ +ME+LA+TTT+GM+GIPLATREAA+ARMPSMIE+QA AA++E+ VI+F+VDGQAG
Sbjct: 215 KSQAGVMEELAVTTTVGMDGIPLATREAAIARMPSMIEKQAVAAVDEASVILFVVDGQAG 274
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTG 345
L AAD EI+DWLR+NY DK I+LAVNKCESPRKG MQ +FWSLGFSPLPISAI+GTGTG
Sbjct: 275 LVAADIEISDWLRRNYSDKCILLAVNKCESPRKGQMQALDFWSLGFSPLPISAITGTGTG 334
Query: 346 ELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGT 405
+LLDLVCSEL+K E + + EE+N++PAIAIVGRPNVGKSSILNALVGEDRTIVSP+SGT
Sbjct: 335 DLLDLVCSELRKFEVLDAVEEEKNKVPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSGT 394
Query: 406 TRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVI 465
TRDAIDTEFT +G+K++LIDTAGIR+R A+ S+GSTTE+LSV RAFRAIRRSDVVALVI
Sbjct: 395 TRDAIDTEFTTADGEKYKLIDTAGIRRRTAVISAGSTTESLSVKRAFRAIRRSDVVALVI 454
Query: 466 EAMACITEQ 474
EAMAC+TEQ
Sbjct: 455 EAMACVTEQ 463
>gi|226503143|ref|NP_001146320.1| uncharacterized protein LOC100279896 [Zea mays]
gi|219886617|gb|ACL53683.1| unknown [Zea mays]
Length = 653
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 261/369 (70%), Positives = 325/369 (88%), Gaps = 5/369 (1%)
Query: 107 GIDVDALEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIG-NVPEHLLPR 165
++V+A+E EA+ A + + L+R+L I D+ +++ + + KT++ ++P++LLP+
Sbjct: 99 AMNVEAMEEEARGAAADLAKRLARELHIDDDVREKR----RNIRDKTSVSKHIPDNLLPK 154
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+GRPNVGKSALFNRLVGGNRAIVVDEPGVTRDR+YGRS+WG+HEFM++DTGGV+ +S
Sbjct: 155 VAIIGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGDHEFMVIDTGGVITLS 214
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KSQ +ME+LA+TTT+GM+GIP ATREAA+ARMPSMIE+QA AA++E+ VI+F+VDGQAG
Sbjct: 215 KSQAGVMEELAVTTTVGMDGIPFATREAAIARMPSMIEKQAVAAVDEASVILFVVDGQAG 274
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTG 345
L AAD EI+DWLR+NY DK I+LAVNKCESPRKG MQ +FWSLGFSPLPISAI+GTGTG
Sbjct: 275 LVAADIEISDWLRRNYSDKCILLAVNKCESPRKGQMQALDFWSLGFSPLPISAITGTGTG 334
Query: 346 ELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGT 405
+LLDLVCSEL+K E + + EE+N++PAIAIVGRPNVGKSSILNALVGEDRTIVSP+SGT
Sbjct: 335 DLLDLVCSELRKFEVLDAVEEEKNKVPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSGT 394
Query: 406 TRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVI 465
TRDAIDTEFT +G+K++LIDTAGIR+R A+ S+GSTTE+LSV RAFRAIRRSDVVALVI
Sbjct: 395 TRDAIDTEFTTADGEKYKLIDTAGIRRRTAVISAGSTTESLSVKRAFRAIRRSDVVALVI 454
Query: 466 EAMACITEQ 474
EAMAC+TEQ
Sbjct: 455 EAMACVTEQ 463
>gi|297746328|emb|CBI16384.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 279/382 (73%), Positives = 312/382 (81%), Gaps = 36/382 (9%)
Query: 99 DESDGQDFGIDVDALEREAKDAVREYSSLLSRQLIIQ-DETDDRKDSGKKQKKRKTTIGN 157
+E + + +DVDALE EAK AVREYS LSRQL I+ D ++ K G KQKK K+T N
Sbjct: 121 EEVANRSYSLDVDALEEEAKHAVREYSRFLSRQLSIEEDGANELKGRGGKQKKSKSTTRN 180
Query: 158 V-PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
V P+HLLPRV IVGRPNVGKSALFNRLVGGN+AIVVDEPGVTRDR+YGR+FWG++EFM++
Sbjct: 181 VIPDHLLPRVTIVGRPNVGKSALFNRLVGGNKAIVVDEPGVTRDRLYGRAFWGDYEFMVI 240
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DTGGVL +SKSQ N +QATAAIEES VI
Sbjct: 241 DTGGVLTISKSQDN---------------------------------KQATAAIEESSVI 267
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPI 336
IFLVDGQAGL+AAD EIADWLRKNY +K I+LAVNKCESP+KGIMQ EFWSLGF+PLPI
Sbjct: 268 IFLVDGQAGLSAADVEIADWLRKNYSNKCIVLAVNKCESPKKGIMQALEFWSLGFTPLPI 327
Query: 337 SAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDR 396
SA+SGTGTGELLDLVCS LKK+E E+L EEN +PAIAIVGRPNVGKSSILNALVGEDR
Sbjct: 328 SAVSGTGTGELLDLVCSGLKKIEDPENLDGEENYVPAIAIVGRPNVGKSSILNALVGEDR 387
Query: 397 TIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIR 456
TIVSP+SGTTRDAIDTEFTGP+GQK+RLIDTAGIR+RAA+ASSGSTTEALSVNRAFRAIR
Sbjct: 388 TIVSPVSGTTRDAIDTEFTGPDGQKYRLIDTAGIRRRAAVASSGSTTEALSVNRAFRAIR 447
Query: 457 RSDVVALVIEAMACITEQADWR 478
RSDVVALVIEAMACITEQ D+R
Sbjct: 448 RSDVVALVIEAMACITEQ-DYR 468
>gi|12322014|gb|AAG51052.1|AC069473_14 GTPase, putative; 34281-30152 [Arabidopsis thaliana]
Length = 659
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 273/364 (75%), Positives = 322/364 (88%), Gaps = 6/364 (1%)
Query: 113 LEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRP 172
LE+EA+D VR+Y++ LSR+L I+DET + K++ +K K+ + +HLL RVAIVGRP
Sbjct: 108 LEKEARDIVRDYATTLSRELKIEDETIEGKETRRKGKRLAKNV----KHLLQRVAIVGRP 163
Query: 173 NVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIM 232
NVGKSALFNRLVG NRAIVVDEPGVTRDR+YGRS+WG+ EF++VDTGGV+ VSKS +M
Sbjct: 164 NVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQEFVVVDTGGVMTVSKSPSGVM 223
Query: 233 EDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEE 292
E+L ++TTIGMEGIPL++REAA+ARMPSMIE+QATAA++ES VIIF+VDGQAG + AD E
Sbjct: 224 EELNVSTTIGMEGIPLSSREAAIARMPSMIEKQATAAVDESAVIIFVVDGQAGPSGADVE 283
Query: 293 IADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVC 352
IADWLRK Y K+IILAVNKCESPRKG+MQ SEFWSLGF+P+PISA+SGTGTGELLDLVC
Sbjct: 284 IADWLRKYYSHKYIILAVNKCESPRKGLMQASEFWSLGFTPIPISALSGTGTGELLDLVC 343
Query: 353 SELKKVEGTEDLVEEENR--IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI 410
S L K+E E++ EEE IPAIAI+GRPNVGKSSILNALV EDRTIVSP+SGTTRDAI
Sbjct: 344 SGLIKLEIMENIEEEEEENYIPAIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAI 403
Query: 411 DTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMAC 470
D EFTGP+G+KFRLIDTAGIRK++++ASSGSTTEA+SVNRAFRAIRRSDVVALVIEAMAC
Sbjct: 404 DAEFTGPDGEKFRLIDTAGIRKKSSVASSGSTTEAMSVNRAFRAIRRSDVVALVIEAMAC 463
Query: 471 ITEQ 474
ITEQ
Sbjct: 464 ITEQ 467
>gi|242069257|ref|XP_002449905.1| hypothetical protein SORBIDRAFT_05g025430 [Sorghum bicolor]
gi|241935748|gb|EES08893.1| hypothetical protein SORBIDRAFT_05g025430 [Sorghum bicolor]
Length = 684
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 265/394 (67%), Positives = 327/394 (82%), Gaps = 30/394 (7%)
Query: 107 GIDVDALEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIG-NVPEHLLPR 165
+DV+ALE EA+ A + + L+R+L I D+ +++ + + KT++ ++P++LLP+
Sbjct: 105 AMDVEALEEEARGAAADLAKRLARELHIDDDVREKR----RNIRDKTSVSKHIPDNLLPK 160
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+GRPNVGKSALFNRLVGGNRAIVVDEPGVTRDR+YGRS+WG+ EFM++DTGGV+ +S
Sbjct: 161 VAIIGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGDQEFMVIDTGGVITLS 220
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA- 284
KSQ +ME+LA+TTT+GM+GIPLATREAA+ARMPSMIE+QA AA++E+ VI+F+VDGQA
Sbjct: 221 KSQAGVMEELAVTTTVGMDGIPLATREAAIARMPSMIEKQAVAAVDEASVILFVVDGQAE 280
Query: 285 ------------------------GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI 320
GL AAD EI+DWLR+NY DK +ILAVNKCESPRKG
Sbjct: 281 IVVLIISYVSSVFTSIMVPNIFQAGLVAADIEISDWLRRNYSDKCVILAVNKCESPRKGQ 340
Query: 321 MQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRP 380
MQ +FWSLGFSPLPISAI+GTGTG+LLDLVCSEL+K EG + + EE+N++PAIAIVGRP
Sbjct: 341 MQALDFWSLGFSPLPISAITGTGTGDLLDLVCSELRKFEGLDTVEEEKNKVPAIAIVGRP 400
Query: 381 NVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSG 440
NVGKSSILNALVGEDRTIVSP+SGTTRDAIDTEFT +G+K++LIDTAGIR+RAA+ S+G
Sbjct: 401 NVGKSSILNALVGEDRTIVSPVSGTTRDAIDTEFTTADGEKYKLIDTAGIRRRAAVISAG 460
Query: 441 STTEALSVNRAFRAIRRSDVVALVIEAMACITEQ 474
STTE+LSV RAFRAIRRSDVVALVIEAMAC+TEQ
Sbjct: 461 STTESLSVKRAFRAIRRSDVVALVIEAMACVTEQ 494
>gi|218186089|gb|EEC68516.1| hypothetical protein OsI_36791 [Oryza sativa Indica Group]
Length = 676
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 269/381 (70%), Positives = 320/381 (83%), Gaps = 17/381 (4%)
Query: 108 IDVDALEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVA 167
+DV+A+E EA AV + S LSR+L I D+ D++ + + + + ++P++LLPRVA
Sbjct: 109 MDVEAMEEEALGAVADLSERLSRELRIDDDVRDKR---RIIRDKTSASKHIPDNLLPRVA 165
Query: 168 IVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKS 227
I+GRPNVGKSALFNRLVGGNRAIVVDEPGVTRDR+YGRS+WG+ EFM++DTGGV+ +SKS
Sbjct: 166 IIGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGDREFMVIDTGGVITLSKS 225
Query: 228 QPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA--- 284
Q +ME+LAITTT+GM+GIPLA+REAA+ARMPSMIE+QA AA++E+ VI+F+VDGQA
Sbjct: 226 QAGVMEELAITTTVGMDGIPLASREAAIARMPSMIEKQAVAAVDEAAVILFIVDGQAVSY 285
Query: 285 -----------GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP 333
GL AAD EIADWLR+NY DK IILAVNKCESPRKG MQ +FWSLGFSP
Sbjct: 286 LTEWVSKIFQDGLVAADIEIADWLRRNYSDKRIILAVNKCESPRKGQMQALDFWSLGFSP 345
Query: 334 LPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVG 393
LPISAI+GTGTGELLD+VCSEL E + + E+ N IPAIAIVGRPNVGKSSILNALVG
Sbjct: 346 LPISAITGTGTGELLDMVCSELSNFEELDGVEEDGNYIPAIAIVGRPNVGKSSILNALVG 405
Query: 394 EDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFR 453
EDRTIVSP+SGTTRDAIDTEFT +GQK++LIDTAGIR+RAA+AS+GSTTE LSV RAFR
Sbjct: 406 EDRTIVSPVSGTTRDAIDTEFTTEDGQKYKLIDTAGIRRRAAVASAGSTTETLSVKRAFR 465
Query: 454 AIRRSDVVALVIEAMACITEQ 474
AIRRSDVVALV+EAMACITEQ
Sbjct: 466 AIRRSDVVALVVEAMACITEQ 486
>gi|9294105|dbj|BAB01956.1| GTP-binding protein-like [Arabidopsis thaliana]
Length = 537
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 262/342 (76%), Positives = 304/342 (88%), Gaps = 2/342 (0%)
Query: 135 QDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDE 194
+DET + K++ +K K+ +PEHLL RVAIVGRPNVGKSALFNRLVG NRAIVVDE
Sbjct: 4 EDETIEGKETRRKGKRLAKNTQQIPEHLLQRVAIVGRPNVGKSALFNRLVGENRAIVVDE 63
Query: 195 PGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAA 254
PGVTRDR+YGRS+WG+ EF++VDTGGV+ VSKS +ME+L ++TTIGMEGIPL++REAA
Sbjct: 64 PGVTRDRLYGRSYWGDQEFVVVDTGGVMTVSKSPSGVMEELNVSTTIGMEGIPLSSREAA 123
Query: 255 VARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+ARMPSMIE+QATAA++ES VIIF+VDGQAG + AD EIADWLRK Y K+IILAVNKCE
Sbjct: 124 IARMPSMIEKQATAAVDESAVIIFVVDGQAGPSGADVEIADWLRKYYSHKYIILAVNKCE 183
Query: 315 SPRKGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENR--IP 372
SPRKG+MQ SEFWSLGF+P+PISA+SGTGTGELLDLVCS L K+E E++ EEE IP
Sbjct: 184 SPRKGLMQASEFWSLGFTPIPISALSGTGTGELLDLVCSGLIKLEIMENIEEEEEENYIP 243
Query: 373 AIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRK 432
AIAI+GRPNVGKSSILNALV EDRTIVSP+SGTTRDAID EFTGP+G+KFRLIDTAGIRK
Sbjct: 244 AIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAIDAEFTGPDGEKFRLIDTAGIRK 303
Query: 433 RAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQ 474
++++ASSGSTTEA+SVNRAFRAIRRSDVVALVIEAMACITEQ
Sbjct: 304 KSSVASSGSTTEAMSVNRAFRAIRRSDVVALVIEAMACITEQ 345
>gi|357155995|ref|XP_003577307.1| PREDICTED: GTPase Der-like [Brachypodium distachyon]
Length = 644
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 249/339 (73%), Positives = 299/339 (88%), Gaps = 4/339 (1%)
Query: 140 DRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTR 199
D ++ + + + +T ++P++ LP+VAI+GRPNVGKSALFNRLVG NRAIVVDEPGVTR
Sbjct: 119 DVREKRRTMRDKTSTSKHIPDNNLPKVAIIGRPNVGKSALFNRLVGSNRAIVVDEPGVTR 178
Query: 200 DRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMP 259
DR+YGRS+WG+ EFM++DTGGV+ +SKSQ +ME+LAITTT+GM+GIPLA+REAA+ARMP
Sbjct: 179 DRLYGRSYWGDQEFMVIDTGGVITLSKSQAGVMEELAITTTVGMDGIPLASREAAIARMP 238
Query: 260 SMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG 319
SMIE+QA AA+EE+ V++FLVDGQAGL AAD EIADWLR+N+ K IILAVNKCESP+KG
Sbjct: 239 SMIEKQAVAAVEEATVLLFLVDGQAGLVAADIEIADWLRRNFSHKCIILAVNKCESPKKG 298
Query: 320 IMQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKVE----GTEDLVEEENRIPAIA 375
MQ EFWSLGF+P+ ISAI+GTGTGELLD+VCSELK E +D+ E+ENR+PAI+
Sbjct: 299 QMQALEFWSLGFTPVSISAITGTGTGELLDMVCSELKNFEVLNIWLDDVEEDENRVPAIS 358
Query: 376 IVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAA 435
IVGRPNVGKSSILNALVGEDRTIVSP+SGTTRDAIDTEFT +GQKF+LIDTAGIR+RAA
Sbjct: 359 IVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAIDTEFTTEDGQKFKLIDTAGIRRRAA 418
Query: 436 IASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQ 474
+AS+GSTTE LSV RAF AIRRSDVVALV+EAMAC+TEQ
Sbjct: 419 VASAGSTTETLSVKRAFSAIRRSDVVALVVEAMACVTEQ 457
>gi|449524852|ref|XP_004169435.1| PREDICTED: GTPase Der-like, partial [Cucumis sativus]
Length = 414
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 268/343 (78%), Positives = 309/343 (90%), Gaps = 4/343 (1%)
Query: 82 DSPFEDEDDDAEYED---VDDESDGQDFGIDVDALEREAKDAVREYSSLLSRQLIIQDET 138
D+ F + DAE ED DDE D +D+ IDV+A E EAKD +REYSS LSR+LII DE
Sbjct: 72 DAGFPENYVDAEGEDPGEFDDEFDDEDYTIDVEAFEEEAKDVLREYSSSLSRELIIDDEL 131
Query: 139 DDRKDSGKKQKKRKTTIGNV-PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGV 197
D+ ++G+K+KKRKTT NV P+HLLPRVAIVGRPNVGKSA+FNRLVGGNRAIVVDEPGV
Sbjct: 132 SDQSETGRKKKKRKTTPRNVIPDHLLPRVAIVGRPNVGKSAMFNRLVGGNRAIVVDEPGV 191
Query: 198 TRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVAR 257
TRDR+YGRSFWG++EFM+VDTGGVL+VSK+Q +++E+LAI+TTIGM+GIPLA+REAAVAR
Sbjct: 192 TRDRLYGRSFWGDNEFMVVDTGGVLSVSKTQNDVIEELAISTTIGMDGIPLASREAAVAR 251
Query: 258 MPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPR 317
MPSMIERQATAA+EE+ V+IFLVDGQAGLTAADEEIADWLR+NY DKF ILAVNKCESPR
Sbjct: 252 MPSMIERQATAAVEEASVVIFLVDGQAGLTAADEEIADWLRRNYSDKFTILAVNKCESPR 311
Query: 318 KGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIV 377
KG+MQ SEFWSLGF+PLP+SA+SGTGTGELLDL+CS L+KVE +EDL EEE+ IPA+AIV
Sbjct: 312 KGMMQASEFWSLGFTPLPVSALSGTGTGELLDLLCSRLQKVESSEDLHEEEDYIPAVAIV 371
Query: 378 GRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQ 420
GRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTG +GQ
Sbjct: 372 GRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGQDGQ 414
>gi|168035467|ref|XP_001770231.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678448|gb|EDQ64906.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 542
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/322 (66%), Positives = 258/322 (80%), Gaps = 8/322 (2%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+P+ LLP++AIVGRPNVGKSALFNR+ GG+ AIV DE GVTRDR+Y R+FW HEFMLVD
Sbjct: 30 IPDALLPKIAIVGRPNVGKSALFNRIAGGDIAIVHDEAGVTRDRLYTRAFWSTHEFMLVD 89
Query: 218 TGGVLNVSKSQPNIMED-LAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
TGGVL + P D +A+T G E + A +EA A +P+MIE+QA AA+ + I
Sbjct: 90 TGGVLTI----PGDGSDAVAVTAPGGEEAVAKAIKEAYDAGLPAMIEKQAGAAVSSADSI 145
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPI 336
IF+VDGQAGLTAAD +IA+WLRK + +K I LAVNKCESP KG +QV+EFW+LGF+P+P+
Sbjct: 146 IFVVDGQAGLTAADIDIANWLRKKHSNKKITLAVNKCESPTKGQLQVAEFWTLGFTPVPV 205
Query: 337 SAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDR 396
SAISGTGTG LLDLVC LK +L EEE++ AIAIVG+PNVGKSSILNALVGE+R
Sbjct: 206 SAISGTGTGNLLDLVCEGLK--PAEGELEEEEDKPMAIAIVGKPNVGKSSILNALVGEER 263
Query: 397 TIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIR 456
TIVSP+SGTTRDAIDTEF GQ +LIDTAGIR+R A+AS+GS E+LSVNRAFRAIR
Sbjct: 264 TIVSPVSGTTRDAIDTEFADDNGQTLKLIDTAGIRRRGAVASAGSRAESLSVNRAFRAIR 323
Query: 457 RSDVVALVIEAMACITEQADWR 478
RSDVVALVI+A+ C+TEQ D+R
Sbjct: 324 RSDVVALVIDALDCVTEQ-DFR 344
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 355 LKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEF 414
L K E + +L + +P IAIVGRPNVGKS++ N + G D IV +G TRD + T
Sbjct: 19 LAKEEFSSELRIPDALLPKIAIVGRPNVGKSALFNRIAGGDIAIVHDEAGVTRDRLYTRA 78
Query: 415 TGPEGQKFRLIDTAGI 430
+F L+DT G+
Sbjct: 79 FWST-HEFMLVDTGGV 93
>gi|302808277|ref|XP_002985833.1| hypothetical protein SELMODRAFT_123195 [Selaginella moellendorffii]
gi|300146340|gb|EFJ13010.1| hypothetical protein SELMODRAFT_123195 [Selaginella moellendorffii]
Length = 492
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/328 (62%), Positives = 254/328 (77%), Gaps = 14/328 (4%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
VP HLLP+VAIVGRPNVGKSALFNR+VG N AIV DEPGVTRDR+YGR EFML+
Sbjct: 3 QVPSHLLPKVAIVGRPNVGKSALFNRIVGRNMAIVHDEPGVTRDRLYGRVRGSVQEFMLI 62
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DTGGVL + S + + ++ A ++AA A +PSMIE+QA +A+EE+C +
Sbjct: 63 DTGGVLTIPTSAESGLAGGSVAAA-------QAKKDAAAAGLPSMIEQQAASAVEEACAL 115
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPI 336
+F+VDGQAGLT+AD EI +WLR+ + K I LAVNKCESP+KG++Q +EFWSLGF+P+P+
Sbjct: 116 VFVVDGQAGLTSADIEIGNWLRRKFKHKKIALAVNKCESPKKGLLQAAEFWSLGFTPVPV 175
Query: 337 SAISGTGTGELLDLVCSELKKVEGTEDL-VEEENRIPAIAIVGRPNVGKSSILNALVGED 395
SAISG+G +LL+ V S +K E ++L E +R ++AI+GRPNVGKSSILNA+VG++
Sbjct: 176 SAISGSGVPDLLEDVTSAIK--EKQDELEASEGDRPLSVAIIGRPNVGKSSILNAIVGKE 233
Query: 396 RTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAI 455
RTIVSP+SGTTRDAIDTE TGPEG+ FRLIDTAGIRKRAAIAS GS TE+L V A RAI
Sbjct: 234 RTIVSPVSGTTRDAIDTEVTGPEGKVFRLIDTAGIRKRAAIASGGSKTESLCVQSALRAI 293
Query: 456 RRSDVVALVIEAMACITEQADWRDHRWG 483
RR+DVVALVIEAM C TEQ D+R G
Sbjct: 294 RRADVVALVIEAMTCATEQ----DYRLG 317
>gi|302806046|ref|XP_002984773.1| hypothetical protein SELMODRAFT_121150 [Selaginella moellendorffii]
gi|300147359|gb|EFJ14023.1| hypothetical protein SELMODRAFT_121150 [Selaginella moellendorffii]
Length = 490
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/328 (63%), Positives = 253/328 (77%), Gaps = 14/328 (4%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
VP HLLP+VAIVGRPNVGKSALFNR+VG N AIV DEPGVTRDR+YGR EFML+
Sbjct: 1 QVPSHLLPKVAIVGRPNVGKSALFNRIVGRNMAIVHDEPGVTRDRLYGRVRGSVQEFMLI 60
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DTGGVL + S + + G A ++AAVA +PSMIE+QA +A+EE+C +
Sbjct: 61 DTGGVLTIPTSAESGLAG-------GSVAAAQAKKDAAVAGLPSMIEQQAASAVEEACAL 113
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPI 336
+F+VDGQAGLT+AD EI +WLR+ + K I LAVNKCESP+KG++Q +EFWSLGF+P+P+
Sbjct: 114 VFVVDGQAGLTSADIEIGNWLRRKFKHKKIALAVNKCESPKKGLLQAAEFWSLGFTPVPV 173
Query: 337 SAISGTGTGELLDLVCSELKKVEGTEDL-VEEENRIPAIAIVGRPNVGKSSILNALVGED 395
SAISG+G +LL+ V S +K E ++L E +R ++AI+GRPNVGKSSILNA+VG++
Sbjct: 174 SAISGSGVPDLLEDVTSAIK--EKQDELEASEGDRPLSVAIIGRPNVGKSSILNAIVGKE 231
Query: 396 RTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAI 455
RTIVSP+SGTTRDAIDTE GPEG+ FRLIDTAGIRKRAAIAS GS TE+L V A RAI
Sbjct: 232 RTIVSPVSGTTRDAIDTEVAGPEGKVFRLIDTAGIRKRAAIASGGSKTESLCVQSALRAI 291
Query: 456 RRSDVVALVIEAMACITEQADWRDHRWG 483
RR+DVVALVIEAM C TEQ D+R G
Sbjct: 292 RRADVVALVIEAMTCATEQ----DYRLG 315
>gi|62320818|dbj|BAD93758.1| hypothetical protein [Arabidopsis thaliana]
Length = 370
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/261 (68%), Positives = 219/261 (83%)
Query: 113 LEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRP 172
LE+EA+D VR+Y++ LSR+L I+DET + K++ +K K+ +PEHLL RVAIVGRP
Sbjct: 108 LEKEARDIVRDYATTLSRELKIEDETIEGKETRRKGKRLAKNTQQIPEHLLQRVAIVGRP 167
Query: 173 NVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIM 232
NVGKSALFNRLVG NRAIVVDEPGVTRDR+YGRS+WG+ EF++VDTGGV+ VSKS +M
Sbjct: 168 NVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQEFVVVDTGGVMTVSKSPSGVM 227
Query: 233 EDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEE 292
E+L ++TTIGMEGIPL++REAA+ARMPSMIE+QATAA++ES VIIF+VDGQAG + AD E
Sbjct: 228 EELNVSTTIGMEGIPLSSREAAIARMPSMIEKQATAAVDESAVIIFVVDGQAGPSGADVE 287
Query: 293 IADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVC 352
IADWLRK Y K+IILAVN CESPRKG+MQ SEFWSLGF+P+PISA+SGTGTGELLDLVC
Sbjct: 288 IADWLRKYYSHKYIILAVNMCESPRKGLMQASEFWSLGFTPIPISALSGTGTGELLDLVC 347
Query: 353 SELKKVEGTEDLVEEENRIPA 373
S L K+E L + +I A
Sbjct: 348 SGLIKLEVCNGLSFFQKQICA 368
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 368 ENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI-DTEFTGPEGQKFRLID 426
E+ + +AIVGRPNVGKS++ N LVGE+R IV G TRD + + G Q+F ++D
Sbjct: 155 EHLLQRVAIVGRPNVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGD--QEFVVVD 212
Query: 427 TAGI 430
T G+
Sbjct: 213 TGGV 216
>gi|145351972|ref|XP_001420333.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580567|gb|ABO98626.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 555
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/341 (53%), Positives = 228/341 (66%), Gaps = 26/341 (7%)
Query: 141 RKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD 200
R D+ ++K R+ VP+ LPRVA+VGRPNVGKSALFNRL G RAIV DEPGVTRD
Sbjct: 65 RADARVRRKTRRD-WSKVPDEALPRVAVVGRPNVGKSALFNRLTGTKRAIVYDEPGVTRD 123
Query: 201 RMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPS 260
RMY R++WGEHEFM+VDTGG+ N+ + EG P V +P
Sbjct: 124 RMYVRAYWGEHEFMMVDTGGLENLPANP---------------EGGPKTDTVGGVEILPG 168
Query: 261 MIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI 320
MIE QA A+ E+ V+IF+VDGQ GLTAAD +I WLR+ + + LAVNKCES KG
Sbjct: 169 MIEAQAAEAVREASVLIFVVDGQVGLTAADMDIFAWLRRTHSKIPLHLAVNKCESTTKGE 228
Query: 321 MQVSEFWSLG-FSPLPISAISGTGTGELLDLVCSEL-KKVEGTEDLVEEENRIP-AIAIV 377
Q+ EFWSLG +PL +SAISGTGTGELLD +C+ L + +ED EE IP +AI+
Sbjct: 229 DQILEFWSLGDVTPLAVSAISGTGTGELLDNMCATLPPPPQVSEDENAEEEDIPVTVAII 288
Query: 378 GRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDT----EFTGPEGQKFRLIDTAGIRKR 433
GRPNVGKSS+LN L GE R+IVS SGTTRD+IDT ++T G+KF LIDTAGIR+R
Sbjct: 289 GRPNVGKSSLLNGLAGEARSIVSDFSGTTRDSIDTLVEDKYT---GRKFTLIDTAGIRRR 345
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQ 474
+ S E LSV RA +A++R+DVV LVI+ ++Q
Sbjct: 346 TQVKSGTDGAEKLSVGRALQAMKRADVVVLVIDGTEGPSQQ 386
>gi|384253172|gb|EIE26647.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 610
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 176/350 (50%), Positives = 241/350 (68%), Gaps = 29/350 (8%)
Query: 145 GKKQKKRKTTIGNVPEHL------LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVT 198
KK K+ + G++P LP+VAIVGRPNVGKSALFNR+ G N AIV D PGVT
Sbjct: 110 AKKSKRTREARGSIPTDNGIPLADLPKVAIVGRPNVGKSALFNRITGSNLAIVYDYPGVT 169
Query: 199 RDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIP----------- 247
RDR+Y R+ WG +F++VDTGG+++ + P+ +AI + G+P
Sbjct: 170 RDRLYTRASWGATDFVVVDTGGLMSDASQLPSDQRIVAIKA-LSDAGLPQARICTQFTLS 228
Query: 248 --LATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKF 305
L TR+A IERQA AA+ E+ I+ ++DGQ GLTAADEEI WLR+++ +K
Sbjct: 229 LHLHTRKA--------IERQAAAAVAEANSIVLVMDGQLGLTAADEEIVSWLRRSHPNKP 280
Query: 306 IILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKVEGTEDLV 365
+ LA+NKCE+P+K +QVSEFW+LG P+ +SAISGTGTGEL++ + + L + +E +
Sbjct: 281 VHLAINKCENPQKADLQVSEFWALGLEPIAVSAISGTGTGELMEQLMASLAPPKSSESVA 340
Query: 366 EEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLI 425
+ + A+AI+GRPNVGKSS+LN+L GE+R+IVS ISGTTRDAIDT+ +G++F+LI
Sbjct: 341 APDAPL-AVAIIGRPNVGKSSLLNSLAGEERSIVSAISGTTRDAIDTDVKLADGRRFKLI 399
Query: 426 DTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQA 475
DTAGIRKR A+A S E LSVNRA +A+RR++VVALV++A C +A
Sbjct: 400 DTAGIRKRVAVADSKDGAEPLSVNRALQAVRRAEVVALVLDASECADAEA 449
>gi|222616294|gb|EEE52426.1| hypothetical protein OsJ_34551 [Oryza sativa Japonica Group]
Length = 563
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/190 (81%), Positives = 170/190 (89%)
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGT 344
GL AAD EIADWLR+NY DK IILAVNKCESPRKG MQ +FWSLGFSPLPISAI+GTGT
Sbjct: 184 GLVAADIEIADWLRRNYSDKHIILAVNKCESPRKGQMQALDFWSLGFSPLPISAITGTGT 243
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GELLD+VCSEL E + + E+ N IPAIAIVGRPNVGKSSILNALVGEDRTIVSP+SG
Sbjct: 244 GELLDMVCSELSNFEELDGVEEDGNYIPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSG 303
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDTEFT +GQK++LIDTAGIR+RAA+AS+GSTTE LSV RAFRAIRRSDVVALV
Sbjct: 304 TTRDAIDTEFTTEDGQKYKLIDTAGIRRRAAVASAGSTTETLSVKRAFRAIRRSDVVALV 363
Query: 465 IEAMACITEQ 474
+EAMACITEQ
Sbjct: 364 VEAMACITEQ 373
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Query: 108 IDVDALEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVA 167
+DV+A+E EA AV + S LSR+L I D+ D++ + + + + ++P++LLPRVA
Sbjct: 108 MDVEAMEEEALGAVADLSERLSRELRIDDDVRDKR---RIIRDKTSASKHIPDNLLPRVA 164
Query: 168 IVGRPNVGKSALFNRLVG 185
I+GRPNVGKSALFNRLVG
Sbjct: 165 IIGRPNVGKSALFNRLVG 182
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 37/161 (22%)
Query: 161 HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDT 218
+ +P +AIVGRPNVGKS++ N LVG +R IV G TRD + F E ++ L+DT
Sbjct: 268 NYIPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAI-DTEFTTEDGQKYKLIDT 326
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE----RQATAAIEESC 274
G+ R AAVA S E ++A AI S
Sbjct: 327 AGI----------------------------RRRAAVASAGSTTETLSVKRAFRAIRRSD 358
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
V+ +V+ A +T D +IA+ + K K ++ VNK ++
Sbjct: 359 VVALVVEAMACITEQDYKIAERIEKE--GKACVIVVNKWDT 397
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 23/27 (85%)
Query: 368 ENRIPAIAIVGRPNVGKSSILNALVGE 394
+N +P +AI+GRPNVGKS++ N LVG+
Sbjct: 157 DNLLPRVAIIGRPNVGKSALFNRLVGD 183
>gi|159479670|ref|XP_001697913.1| hypothetical protein CHLREDRAFT_120661 [Chlamydomonas reinhardtii]
gi|158274011|gb|EDO99796.1| predicted protein [Chlamydomonas reinhardtii]
Length = 446
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 161/309 (52%), Positives = 208/309 (67%), Gaps = 30/309 (9%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKSALFNR+ G + A+V D+PGVTRDR+Y R+FWG+ EF+++DTGG+++ +
Sbjct: 1 VAIVGRPNVGKSALFNRIAGASVAVVFDQPGVTRDRLYTRAFWGDKEFVMIDTGGLMSDA 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
P P IERQA A + E+ +I LVDGQAG
Sbjct: 61 TRLP-----------------------------PDAIERQAAAGVAEADTVILLVDGQAG 91
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTG 345
L DEEI WLR N+ K ++LAVNKCE+ K V+EFWS G P +SAISGTGTG
Sbjct: 92 LQPGDEEILSWLRSNHPSKSLLLAVNKCENVAKADQMVAEFWSTGLEPHAVSAISGTGTG 151
Query: 346 ELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGT 405
E+LD++ L G E ++ +R A+AIVGRPNVGKSS+LNA+ GE+R+IV +SGT
Sbjct: 152 EMLDVLAKMLPPPTGAEQ-DDDPDRPLAVAIVGRPNVGKSSLLNAIAGEERSIVCDMSGT 210
Query: 406 TRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVI 465
TRDA+DT+ T P G+K LIDTAGIRKR+ +A S E +SV+RA RA+RR+DV LVI
Sbjct: 211 TRDAVDTKVTLPTGKKLTLIDTAGIRKRSRVADSPDGAEQISVDRAMRAVRRADVAVLVI 270
Query: 466 EAMACITEQ 474
+A+ IT+Q
Sbjct: 271 DAVEGITQQ 279
>gi|303284441|ref|XP_003061511.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456841|gb|EEH54141.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 470
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/309 (54%), Positives = 212/309 (68%), Gaps = 20/309 (6%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPRVAIVGRPNVGKSALFNRL G RAIV D+PG+TRDRMY R+FWG+ EFM+VDTGG+
Sbjct: 3 LPRVAIVGRPNVGKSALFNRLTGTKRAIVYDQPGITRDRMYVRAFWGDSEFMMVDTGGL- 61
Query: 223 NVSKSQP-NIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+S P N ++ G E +P MIE QA A+ E+ ++ +VD
Sbjct: 62 ---ESLPGNPGAAPSVDAVGGFE------------ILPGMIESQAALAVREAASLVMVVD 106
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLG-FSPLPISAIS 340
GQ GLT AD +I W+RKN+ DK ++LAVNKCES +G QV +FWSLG +PL +SAIS
Sbjct: 107 GQTGLTTADVDIYRWIRKNHADKPLVLAVNKCESTTRGEEQVLDFWSLGGVTPLAVSAIS 166
Query: 341 GTGTGELLDLVCSELKKVEGTEDLV--EEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
GTGTG+++D +C+ L V ++ EE +AIVGRPNVGKSS+LN L G+ R I
Sbjct: 167 GTGTGDMMDQLCATLPAVNADDEKESGEEVAEPLKVAIVGRPNVGKSSLLNQLSGDARAI 226
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VS SGTTRD ID++ T +G KF LIDTAGIR+R A+A+ E LSV RA +A+RR+
Sbjct: 227 VSDHSGTTRDTIDSDVTDADGNKFTLIDTAGIRRRTAVAAGKDKPEELSVGRALQAMRRA 286
Query: 459 DVVALVIEA 467
+VV LVI+A
Sbjct: 287 EVVVLVIDA 295
>gi|412987790|emb|CCO19186.1| GTP-binding protein EngA [Bathycoccus prasinos]
Length = 816
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 173/342 (50%), Positives = 216/342 (63%), Gaps = 38/342 (11%)
Query: 156 GNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFML 215
G +P+ LLP+VA+VGRPNVGKSALFNRL G RAIV DEPGVTRDRMY R+FWG+HEFML
Sbjct: 308 GTIPQELLPKVAVVGRPNVGKSALFNRLTGTKRAIVFDEPGVTRDRMYVRAFWGDHEFML 367
Query: 216 VDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCV 275
VDTGG+ N+ PN P R V +P MIE QA A+ E+ V
Sbjct: 368 VDTGGLENLP-GDPN--------------AAPSIDRIGGVEILPGMIEAQAAEAVREADV 412
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL---GFS 332
+IF+ DGQ+GLTAAD+EI WLRK++ D + LAVNKCES +G V +FW L +
Sbjct: 413 LIFVTDGQSGLTAADKEIFRWLRKHHADIPVHLAVNKCESSTRGEEMVLDFWQLSSKSVA 472
Query: 333 PLPISAISGTGTGELLDLVCSELKKVEGTEDLVE--------EENRIP-AIAIVGRPNVG 383
P+ +SAISGTGTGELLD VC L + E+ + E+ +P +AIVGRPNVG
Sbjct: 473 PIGVSAISGTGTGELLDAVCESLPEPPTMEEQISIAEENKEKEDKELPIQVAIVGRPNVG 532
Query: 384 KSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEG--QKFRLIDTAGIRKRAAIASSGS 441
KSS+LN L G R+IVS SGTTRD IDT+ ++F LIDTAGIR+R I
Sbjct: 533 KSSLLNGLAGTPRSIVSDFSGTTRDTIDTDVVDKNHPDREFTLIDTAGIRRRTQIKRDSK 592
Query: 442 TT---------EALSVNRAFRAIRRSDVVALVIEAMACITEQ 474
+ E S+ RA +A++R+DVV LVI+A T+Q
Sbjct: 593 SIKGEEKKFGLEQQSIGRALQAMKRADVVVLVIDATEGATQQ 634
>gi|308809447|ref|XP_003082033.1| GTP-binding protein-like (ISS) [Ostreococcus tauri]
gi|116060500|emb|CAL55836.1| GTP-binding protein-like (ISS) [Ostreococcus tauri]
Length = 500
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 174/320 (54%), Positives = 219/320 (68%), Gaps = 26/320 (8%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPRVA+VGRPNVGKSALFNRL G RAIV DEPGVTRDRMY RS+WGE EFM+VDTGG
Sbjct: 29 LPRVAVVGRPNVGKSALFNRLTGTKRAIVYDEPGVTRDRMYTRSYWGESEFMMVDTGGFE 88
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
N+ ++ EG P R V +P+MIE QA A++E+ V++F+VDG
Sbjct: 89 NLPRNP---------------EGAPKIDRVGGVEILPAMIEAQAAEAVKEAAVLVFVVDG 133
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLG-FSPLPISAISG 341
Q GLT AD +I WLR+++ DK + LAVNKCES KG Q+ +FW LG +PL +SAISG
Sbjct: 134 QVGLTEADRDIYRWLRRSHSDKPLHLAVNKCESTTKGEEQIIDFWQLGDVTPLAVSAISG 193
Query: 342 TGTGELLDLVCSEL---KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
TGTG+LLD VC+ L +V + EEE +AI+GRPNVGKSS+LN L GE R+I
Sbjct: 194 TGTGDLLDNVCATLPQPPQVGDGDVPEEEEEVPVTLAIIGRPNVGKSSLLNGLAGEMRSI 253
Query: 399 VSPISGTTRDAIDT----EFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRA 454
VS SGTTRD+IDT ++T G+K+ LIDTAGIR+R + S E LSV RA +A
Sbjct: 254 VSDFSGTTRDSIDTMVEDKYT---GKKYTLIDTAGIRRRTQVKSGSDGAEKLSVGRALQA 310
Query: 455 IRRSDVVALVIEAMACITEQ 474
++R+DVV LVI+A ++Q
Sbjct: 311 MKRADVVCLVIDATQGPSQQ 330
>gi|282895428|ref|ZP_06303565.1| GTP-binding protein engA [Raphidiopsis brookii D9]
gi|281199461|gb|EFA74324.1| GTP-binding protein engA [Raphidiopsis brookii D9]
Length = 453
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 170/313 (54%), Positives = 206/313 (65%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL G AIV DEPGVTRDR Y +FW EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGDQTAIVHDEPGVTRDRTYRPAFWQNREFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ E+C IF+VDG
Sbjct: 62 --------VFND-------NTEFLPL-------------IRQQAITALSEACAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAGLT ADEEIA+WLR+ + +LAVNKCESP +G++Q SEFW LG P PISAI G
Sbjct: 94 QAGLTPADEEIAEWLRQQTVPT--LLAVNKCESPDQGVIQASEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG+LLD + +K EDL +EN +AIVGRPNVGKSS+LNA VGE+R IVSP
Sbjct: 152 SGTGDLLDEL---IKYTPQVEDL--QENSEVKVAIVGRPNVGKSSLLNAFVGEERAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD IDT EGQ +RLIDTAGIRK+ + TE S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDTIDT-LIEREGQAYRLIDTAGIRKKKHVEYG---TEFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LV++A+ +TEQ
Sbjct: 263 LLVLDALDGVTEQ 275
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAIVGRPNVGKS+L N VG RAIV G TRD + + L+DT G+
Sbjct: 178 KVAIVGRPNVGKSSLLNAFVGEERAIVSPISGTTRDTIDTLIEREGQAYRLIDTAGIRK- 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + T ++ R A AI + V++ ++D
Sbjct: 237 ------------------KKHVEYGTEFFSINR--------AFKAIRRADVVLLVLDALD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFS----PLP 335
G+T D+++A + ++ + I+ VNK ++ K + + L F+ +
Sbjct: 271 GVTEQDQKLAGRIIED--GRACIIVVNKWDAVEKDSYTIYDHEKSLEARLHFTEWADTIF 328
Query: 336 ISAISGTGTGELLDLV 351
+SA++G ++LDLV
Sbjct: 329 VSAVTGQRVEKILDLV 344
>gi|282900427|ref|ZP_06308377.1| Small GTP-binding protein domain protein [Cylindrospermopsis
raciborskii CS-505]
gi|281194740|gb|EFA69687.1| Small GTP-binding protein domain protein [Cylindrospermopsis
raciborskii CS-505]
Length = 453
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 168/313 (53%), Positives = 204/313 (65%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL G AIV DEPGVTRDR Y +FW EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGDQTAIVHDEPGVTRDRTYRPAFWQNREFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ E+C IF+VDG
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQAITALSEACAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLT ADEEIA+WLR+ + +LAVNKCESP +GI+Q SEFW LG P PISAI G
Sbjct: 94 QTGLTPADEEIAEWLRQQPVPT--LLAVNKCESPDQGIIQASEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG+LLD + + +VE +EN +AIVGRPNVGKSS+LNA VGE+R IVSP
Sbjct: 152 SGTGDLLDDLIQYIPQVEEL-----QENTEVKVAIVGRPNVGKSSLLNAFVGEERAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD IDT EGQ +RLIDTAGIRK+ + TE S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDTIDT-LIEREGQAYRLIDTAGIRKKKHVEYG---TEFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LV++A+ +TEQ
Sbjct: 263 LLVLDALDGVTEQ 275
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAIVGRPNVGKS+L N VG RAIV G TRD + + L+DT G+
Sbjct: 178 KVAIVGRPNVGKSSLLNAFVGEERAIVSPISGTTRDTIDTLIEREGQAYRLIDTAGIRK- 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + T ++ R A AI + V++ ++D
Sbjct: 237 ------------------KKHVEYGTEFFSINR--------AFKAIRRADVVLLVLDALD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFS----PLP 335
G+T D+++A + ++ + I+ VNK + K + + L F+ +
Sbjct: 271 GVTEQDQKLAGRIVED--GRACIIVVNKWDVVEKDSYTIYDHEKSLEARLHFTEWADTIF 328
Query: 336 ISAISGTGTGELLDLV 351
+SAI+G ++LDLV
Sbjct: 329 VSAITGQRVEKILDLV 344
>gi|186682120|ref|YP_001865316.1| GTP-binding protein EngA [Nostoc punctiforme PCC 73102]
gi|238691263|sp|B2J1L2.1|DER_NOSP7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|186464572|gb|ACC80373.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
Length = 456
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/313 (53%), Positives = 208/313 (66%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y +FW EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYMPAFWNGREFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ E+C IF+VDG
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQAMTALAEACAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T+AD+EIA+W+R+ + ++LAVNKCESP +G+MQ +EFW LG P PISAI G
Sbjct: 94 QTGPTSADQEIAEWMRQQRVP--VLLAVNKCESPDQGLMQAAEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + + + VE + E N I +AIVGRPNVGKSS+LNA VGE+R IVSP
Sbjct: 152 SGTGELLDELVNHIPAVED----IPETNEI-KVAIVGRPNVGKSSLLNAFVGEERAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT +GQ +RLIDTAGIRK+ I TE S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDT-VIERDGQTYRLIDTAGIRKKKHIEYG---TEFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LV++A+ +TEQ
Sbjct: 263 LLVLDAVDGVTEQ 275
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 38/206 (18%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+ ++PE +VAIVGRPNVGKS+L N VG RAIV G TRD + +
Sbjct: 168 VEDIPETNEIKVAIVGRPNVGKSSLLNAFVGEERAIVSPISGTTRDAIDTVIERDGQTYR 227
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ + I T ++ R A AI +
Sbjct: 228 LIDTAGIRK-------------------KKHIEYGTEFFSINR--------AFKAIRRAD 260
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----L 329
V++ ++D G+T D+++A + + + I+ VNK ++ K + ++ L
Sbjct: 261 VVLLVLDAVDGVTEQDQKLAGRIIEE--GRACIIVVNKWDAVEKDSYTIYDYEKTLQSRL 318
Query: 330 GFS----PLPISAISGTGTGELLDLV 351
F+ + +SA+SG ++L+LV
Sbjct: 319 HFTEWAETIFVSALSGQRVEKILELV 344
>gi|427707500|ref|YP_007049877.1| GTP-binding protein engA [Nostoc sp. PCC 7107]
gi|427360005|gb|AFY42727.1| GTP-binding protein engA [Nostoc sp. PCC 7107]
Length = 453
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 167/313 (53%), Positives = 212/313 (67%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y ++W + E+++VDTGG++
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYMPAYWNDREYLVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
++ E +PL I +QA AA+ E+C IF+V+G
Sbjct: 63 FNDET----------------EFLPL-------------IRQQALAALREACAAIFVVNG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G + ADEEIA+WLR+ + ++LAVNKCESP +GI+Q +EFW LG P PISAI G
Sbjct: 94 QTGPSPADEEIAEWLRQQPVP--VLLAVNKCESPEQGIIQAAEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + + V TE + E N I +AI+GRPNVGKSS+LNA VGE+R IVSP
Sbjct: 152 NGTGELLDELIKHIPSV--TE--IPETNEI-KVAIIGRPNVGKSSLLNAFVGEERAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT F +GQ++RLIDTAGIRK+ +I TE S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDT-FIERDGQQYRLIDTAGIRKKKSIDYG---TEFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LV++A+ +TEQ
Sbjct: 263 LLVLDALDGVTEQ 275
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 44/214 (20%)
Query: 150 KRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG 209
K ++ +PE +VAI+GRPNVGKS+L N VG RAIV G TRD +
Sbjct: 163 KHIPSVTEIPETNEIKVAIIGRPNVGKSSLLNAFVGEERAIVSPISGTTRDAIDTFIERD 222
Query: 210 EHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAA 269
++ L+DT G+ + I T ++ R A A
Sbjct: 223 GQQYRLIDTAGIRK-------------------KKSIDYGTEFFSINR--------AFKA 255
Query: 270 IEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF--- 326
I + V++ ++D G+T D+++A + + + I+ VNK ++ K + ++
Sbjct: 256 IRRADVVLLVLDALDGVTEQDQKLAGRIIEE--GRACIVVVNKWDAIEKDSHTIYDYEKS 313
Query: 327 ---------WSLGFSPLPISAISGTGTGELLDLV 351
W+ S + +SA++G ++L+LV
Sbjct: 314 MQERLHFTDWA---STIFVSALTGQRVEKILELV 344
>gi|428219482|ref|YP_007103947.1| GTP-binding protein engA [Pseudanabaena sp. PCC 7367]
gi|427991264|gb|AFY71519.1| GTP-binding protein engA [Pseudanabaena sp. PCC 7367]
Length = 454
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/320 (52%), Positives = 209/320 (65%), Gaps = 40/320 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSA NRL G AIV D+PGVTRDR Y R+FW +HEF +VDTGG+
Sbjct: 3 LPIVAIVGRPNVGKSAFVNRLAGQQDAIVYDQPGVTRDRTYRRAFWRDHEFNVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ ED E +PL I +QA AI +S +IF+VDG
Sbjct: 62 --------VFED-------NTEFLPL-------------IRQQALLAISQSQAVIFMVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLTAADE+IADWLR+ + I++AVNKCESP G+ Q +EFW LG P PIS I G
Sbjct: 94 QDGLTAADEQIADWLRQQNIP--ILVAVNKCESPDLGLSQAAEFWELGIGEPFPISGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD++ L E + E E+ I IAI+GRPNVGKSS+LNA +GE R+IVSP
Sbjct: 152 NGTGELLDILVQHLP---APETVTEAEDEI-KIAIIGRPNVGKSSLLNAFLGEQRSIVSP 207
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDAIDT+ + +K+RLIDTAGIR++ ++ E +NRAF+AI RSDVV
Sbjct: 208 IAGTTRDAIDTQVIRGD-RKYRLIDTAGIRRKRSVNYG---PEFFGINRAFKAINRSDVV 263
Query: 462 ALVIEAMACITEQADWRDHR 481
+VI+A+ +T+Q HR
Sbjct: 264 LMVIDALEGVTDQDQKLAHR 283
>gi|434403314|ref|YP_007146199.1| ribosome-associated GTPase EngA [Cylindrospermum stagnale PCC 7417]
gi|428257569|gb|AFZ23519.1| ribosome-associated GTPase EngA [Cylindrospermum stagnale PCC 7417]
Length = 454
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 168/313 (53%), Positives = 200/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y SFW + EFM+VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYMPSFWNDREFMVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ E+C IF+VDG
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQALIALAEACAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T ADEEIA WLR+ + ++LAVNKCESP +G MQ ++FW LG P PISAI G
Sbjct: 94 QTGPTPADEEIAGWLRQQSVP--VLLAVNKCESPDQGAMQAADFWGLGLGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + + VE E E + +AI+GRPNVGKSS+LN VGE+R IVSP
Sbjct: 152 SGTGELLDELVQHIPAVED-----EPETNVIKVAIIGRPNVGKSSLLNVFVGEERAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT GQ +RLIDTAGIRK+ I TE S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDT-VVERNGQTYRLIDTAGIRKKKHIEYG---TEFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LV++A TEQ
Sbjct: 263 LLVLDAQDGATEQ 275
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 38/202 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE + +VAI+GRPNVGKS+L N VG RAIV G TRD + + L+DT
Sbjct: 172 PETNVIKVAIIGRPNVGKSSLLNVFVGEERAIVSPISGTTRDAIDTVVERNGQTYRLIDT 231
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + I T ++ R A AI + V++
Sbjct: 232 AGIRK-------------------KKHIEYGTEFFSINR--------AFKAIRRADVVLL 264
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFS- 332
++D Q G T D+++A + + + I+ VNK ++ K + ++ L F+
Sbjct: 265 VLDAQDGATEQDQKLAGRILEE--GRACIIVVNKWDTVEKDSYTIYDYEKALQERLHFTE 322
Query: 333 ---PLPISAISGTGTGELLDLV 351
+ +SA++G ++L+LV
Sbjct: 323 WADTIFVSALTGQRVEKVLELV 344
>gi|414075715|ref|YP_006995033.1| small GTP-binding protein [Anabaena sp. 90]
gi|413969131|gb|AFW93220.1| small GTP-binding protein [Anabaena sp. 90]
Length = 454
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 165/313 (52%), Positives = 206/313 (65%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL G AIV DEPGVTRDR Y +FW + EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGDQTAIVHDEPGVTRDRTYRPAFWNDREFVVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +P MI +QA A+ E+C IF+VDG
Sbjct: 62 --------VFND-------DTEFLP-------------MIRQQALTALSEACAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAGL ADEEI++WLR+ + ++LAVNKCESP +G++Q +EFW LG P PISAI G
Sbjct: 94 QAGLMPADEEISEWLRQQPVP--VLLAVNKCESPDQGVIQAAEFWELGLGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGE+LD + + + + + EEEN+ +AI+GRPNVGKSS+LNA VGE R IVSP
Sbjct: 152 SGTGEILDELMNHIPLI-----VEEEENKEIKVAIIGRPNVGKSSLLNAFVGEYRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD IDT + Q +RLIDTAGIRK+ I TE S+NRAF+AIRRSDVV
Sbjct: 207 ISGTTRDTIDTVVERGD-QTYRLIDTAGIRKKKHIEYG---TEFFSINRAFKAIRRSDVV 262
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 263 LLVIDAVDGVTEQ 275
>gi|17227979|ref|NP_484527.1| GTP-binding protein EngA [Nostoc sp. PCC 7120]
gi|26006724|sp|Q8YZH7.1|DER_NOSS1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|17129828|dbj|BAB72441.1| GTP binding protein [Nostoc sp. PCC 7120]
Length = 453
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 172/313 (54%), Positives = 206/313 (65%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y ++W + EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYLPAYWSDREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA AA+ E+ IF+V+G
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQALAALHEASAAIFVVNG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G +ADEEIA+WLR+ + F LAVNKCESP +G +Q SEFW LG P PISAI G
Sbjct: 94 QTGPNSADEEIAEWLRQQPVPVF--LAVNKCESPDQGSIQASEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + L V TE +EE N I IAI+GRPNVGKSS+LNA GE+R IVSP
Sbjct: 152 NGTGELLDELIKHLPPV--TE--LEENNEI-KIAIIGRPNVGKSSLLNAFAGEERVIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT F +GQ +RLIDTAGIRK+ +I TE S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDT-FIERDGQNYRLIDTAGIRKKKSIDYG---TEFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 263 LLVIDALDGVTEQ 275
>gi|427730612|ref|YP_007076849.1| ribosome-associated GTPase EngA [Nostoc sp. PCC 7524]
gi|427366531|gb|AFY49252.1| ribosome-associated GTPase EngA [Nostoc sp. PCC 7524]
Length = 453
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 169/313 (53%), Positives = 209/313 (66%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y ++WG+ EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYMPAYWGDREFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA AA+ E+ IF+V+G
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQALAALTEASAAIFVVNG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G +ADEEIA+WLR+ + ++LAVNKCESP +G++Q +EFW LG P PISAI G
Sbjct: 94 QTGPNSADEEIAEWLRQQPVP--VLLAVNKCESPEQGLIQAAEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + + + V TE V E N I IAIVGRPNVGKSS+LNA VGE+R IVSP
Sbjct: 152 NGTGELLDELITHIPAV--TE--VPESNEI-KIAIVGRPNVGKSSLLNAFVGEERVIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT F +GQ +RLIDTAGIRK+ + E S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDT-FLERDGQAYRLIDTAGIRKKKNVEYG---PEFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LV++A+ +TEQ
Sbjct: 263 LLVLDALDGVTEQ 275
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 38/206 (18%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+ VPE ++AIVGRPNVGKS+L N VG R IV G TRD + +
Sbjct: 168 VTEVPESNEIKIAIVGRPNVGKSSLLNAFVGEERVIVSPISGTTRDAIDTFLERDGQAYR 227
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ + + N+ G E + +A AI +
Sbjct: 228 LIDTAGI----RKKKNV--------EYGPEFFSI---------------NRAFKAIRRAD 260
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----L 329
V++ ++D G+T D+++A + + + I+ VNK ++ K + ++ L
Sbjct: 261 VVLLVLDALDGVTEQDQKLAGRIIEE--GRACIIVVNKWDAVEKDSYTIYDYEKNLEARL 318
Query: 330 GFS----PLPISAISGTGTGELLDLV 351
F+ + +SA++G ++L+LV
Sbjct: 319 HFTEWADTIFVSALTGQRVEKILELV 344
>gi|75909106|ref|YP_323402.1| GTP-binding protein EngA [Anabaena variabilis ATCC 29413]
gi|123609166|sp|Q3M929.1|DER_ANAVT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|75702831|gb|ABA22507.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
29413]
Length = 453
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 170/313 (54%), Positives = 205/313 (65%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y ++W + EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYLPAYWSDREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA AA+ E+ IF+V+G
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQALAALHEASAAIFVVNG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G +ADEEIA+WLR+ + F LAVNKCESP +G +Q SEFW LG P PISAI G
Sbjct: 94 QTGPNSADEEIAEWLRQQPVPVF--LAVNKCESPDQGSIQASEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + +K + T +L EEN IAI+GRPNVGKSS+LNA GE+R IVSP
Sbjct: 152 NGTGELLDEL---IKHLPPTTEL--EENNEIKIAIIGRPNVGKSSLLNAFAGEERVIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT F GQ +RLIDTAGIRK+ +I TE S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDT-FIERNGQNYRLIDTAGIRKKKSIDYG---TEFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 263 LLVIDALDGVTEQ 275
>gi|427720843|ref|YP_007068837.1| GTP-binding protein engA [Calothrix sp. PCC 7507]
gi|427353279|gb|AFY36003.1| GTP-binding protein engA [Calothrix sp. PCC 7507]
Length = 454
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 167/313 (53%), Positives = 207/313 (66%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y ++W + E+++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYKPAYWSDREYLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ E+ IFLVDG
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQAMTALAEASAAIFLVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T ADEEIA+WLR+ + ++LAVNKCESP +G+MQ +EFW LG P PISAI G
Sbjct: 94 QTGPTPADEEIAEWLRQQPVP--VLLAVNKCESPEQGLMQAAEFWELGLGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG++LD + + V TE V E N I +AI+GRPNVGKSS+LNA VGE+R IVSP
Sbjct: 152 SGTGDILDELIKHIPAV--TE--VPETNEI-KVAIIGRPNVGKSSLLNAFVGEERAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT E Q +RLIDTAGIRK+ +I TE S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDTVVERNE-QTYRLIDTAGIRKKKSIEYG---TEFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LV++A+ +TEQ
Sbjct: 263 LLVLDALDGVTEQ 275
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 38/208 (18%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+ VPE +VAI+GRPNVGKS+L N VG RAIV G TRD + E +
Sbjct: 168 VTEVPETNEIKVAIIGRPNVGKSSLLNAFVGEERAIVSPISGTTRDAIDTVVERNEQTYR 227
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ + I T ++ R A AI +
Sbjct: 228 LIDTAGIRK-------------------KKSIEYGTEFFSINR--------AFKAIRRAD 260
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----L 329
V++ ++D G+T D+++A + + + I+ VNK ++ K + ++ L
Sbjct: 261 VVLLVLDALDGVTEQDQKLAGRILEE--GRACIIVVNKWDAVEKDSYTIYDYEKDLEGRL 318
Query: 330 GFS----PLPISAISGTGTGELLDLVCS 353
F+ + +SA++G ++L+LV +
Sbjct: 319 HFTEWADTIYVSAVTGQRVEKILELVNT 346
>gi|298492105|ref|YP_003722282.1| ribosome-associated GTPase EngA ['Nostoc azollae' 0708]
gi|298234023|gb|ADI65159.1| ribosome-associated GTPase EngA ['Nostoc azollae' 0708]
Length = 454
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 164/313 (52%), Positives = 202/313 (64%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y +FWG EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGDQTAIVHDEPGVTRDRTYRPAFWGNREFVVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ E+C IF+VDG
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQALMALSEACAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G AD+EIADWL + + I+LAVNKCESP +G++Q S FW LG P PISAI G
Sbjct: 94 QRGPMPADQEIADWLHQQPVP--ILLAVNKCESPDQGLIQASGFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGE+LD + + + V+ + E+ + +AI+GRPNVGKSS+LNA VGE+R IVSP
Sbjct: 152 SGTGEILDELITHVPNVKDS-----PEDNVIKVAIIGRPNVGKSSLLNAFVGEERAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD IDTE GQ +RLIDTAGIRK+ I TE S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDTIDTEIV-RNGQTYRLIDTAGIRKKKHIEYG---TEFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LV++A TEQ
Sbjct: 263 LLVLDAEDGATEQ 275
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 38/202 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE + +VAI+GRPNVGKS+L N VG RAIV G TRD + + L+DT
Sbjct: 172 PEDNVIKVAIIGRPNVGKSSLLNAFVGEERAIVSPISGTTRDTIDTEIVRNGQTYRLIDT 231
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + I T ++ R A AI + V++
Sbjct: 232 AGIRK-------------------KKHIEYGTEFFSINR--------AFKAIRRADVVLL 264
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP 333
++D + G T D+++A R + I+ VNK ++ K + ++ L F+
Sbjct: 265 VLDAEDGATEQDQKLAG--RITEEGRACIIVVNKWDAVEKDSYTIYDYEKGLEARLHFTE 322
Query: 334 ----LPISAISGTGTGELLDLV 351
+ +SA++G ++L+LV
Sbjct: 323 WADIIFVSAVTGQRVEKILELV 344
>gi|255086559|ref|XP_002509246.1| predicted protein [Micromonas sp. RCC299]
gi|226524524|gb|ACO70504.1| predicted protein [Micromonas sp. RCC299]
Length = 468
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/309 (53%), Positives = 210/309 (67%), Gaps = 22/309 (7%)
Query: 172 PNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNI 231
PNVGKSALFNRL G RAIV D+PGVTRDRMY R+FWG+ EFM+VDTGG+ +S P
Sbjct: 8 PNVGKSALFNRLTGTKRAIVYDQPGVTRDRMYIRAFWGDTEFMMVDTGGL----ESLPGS 63
Query: 232 MEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADE 291
ED T+G I +P M+E QA A+ E+ +I + DGQ GLT ADE
Sbjct: 64 PEDAPSVDTVGGFEI-----------LPGMVESQAALAVNEAAALIMVCDGQKGLTNADE 112
Query: 292 EIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGTGELLDL 350
EI W+RK + K ++LAVNKCES KG QV +FWSLG +PL +SAISGTGTGELLD
Sbjct: 113 EIYGWIRKYHSKKPLLLAVNKCESTTKGEEQVLDFWSLGGPTPLAVSAISGTGTGELLDG 172
Query: 351 VCSELKKVEGTEDL----VEEENRIP-AIAIVGRPNVGKSSILNALVGEDRTIVSPISGT 405
+ + L EDL +EE P +AI+GRPNVGKSS+LN L G+ R+IVS SGT
Sbjct: 173 LVAALPP-PSPEDLDPSWKDEEGDGPLKVAIIGRPNVGKSSLLNQLAGDARSIVSDYSGT 231
Query: 406 TRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVI 465
TRD ID++ G +G+K+ LIDTAGIR+R ++A+S E+L+V RA +A+RR+DVV LVI
Sbjct: 232 TRDTIDSDVIGADGKKYTLIDTAGIRRRTSVAASKDAPESLAVGRALQAMRRADVVVLVI 291
Query: 466 EAMACITEQ 474
+A ++Q
Sbjct: 292 DAEEGPSQQ 300
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 30/135 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGV-- 221
+VAI+GRPNVGKS+L N+L G R+IV D G TRD + + ++ L+DT G+
Sbjct: 199 KVAIIGRPNVGKSSLLNQLAGDARSIVSDYSGTTRDTIDSDVIGADGKKYTLIDTAGIRR 258
Query: 222 ---LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARM-------PS-----MIERQA 266
+ SK P E LA+ + A R A V + PS + ER
Sbjct: 259 RTSVAASKDAP---ESLAVGRAL------QAMRRADVVVLVIDAEEGPSQQDFVLSER-- 307
Query: 267 TAAIEESCVIIFLVD 281
AA++E C ++ V+
Sbjct: 308 -AAVQEGCALVLCVN 321
>gi|428778097|ref|YP_007169884.1| ribosome-associated GTPase EngA [Halothece sp. PCC 7418]
gi|428692376|gb|AFZ45670.1| ribosome-associated GTPase EngA [Halothece sp. PCC 7418]
Length = 455
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/313 (51%), Positives = 202/313 (64%), Gaps = 40/313 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR G AIV DEPG+TRDR+Y SFW + +F++VDTGG++
Sbjct: 4 LPIVAIIGRPNVGKSTLVNRFTGSRHAIVHDEPGITRDRLYQPSFWRDRDFIVVDTGGIV 63
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +P I +QA A+ E+ IF+VDG
Sbjct: 64 FDDDS----------------EFLP-------------EIRQQAMMALSEAVAAIFVVDG 94
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T+ DEEIADWLR+ + + LAVNKCE+P +G+MQ ++FW LG P P+S I G
Sbjct: 95 QTGPTSGDEEIADWLRQQSVP--VYLAVNKCEAPEQGLMQAAQFWELGLGEPYPVSGIHG 152
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG+LLD V S E+L EE+N I +AI+GRPNVGKSS+LNAL G R+IVSP
Sbjct: 153 SGTGDLLDAVISTFPPY---EELPEEDNEI-NVAIIGRPNVGKSSLLNALTGASRSIVSP 208
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
+SGTTRDAID + +GQ +RLIDTAGIRK+ I E S+NRAF+AIRRSDV
Sbjct: 209 VSGTTRDAIDLQIEH-QGQTYRLIDTAGIRKKKNIRYGA---EFFSINRAFKAIRRSDVS 264
Query: 462 ALVIEAMACITEQ 474
LVI+A+ IT+Q
Sbjct: 265 LLVIDALDSITDQ 277
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 369 NRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTA 428
++P +AI+GRPNVGKS+++N G IV G TRD + + + + F ++DT
Sbjct: 2 KKLPIVAIIGRPNVGKSTLVNRFTGSRHAIVHDEPGITRDRL-YQPSFWRDRDFIVVDTG 60
Query: 429 GI 430
GI
Sbjct: 61 GI 62
>gi|440684386|ref|YP_007159181.1| GTP-binding protein engA [Anabaena cylindrica PCC 7122]
gi|428681505|gb|AFZ60271.1| GTP-binding protein engA [Anabaena cylindrica PCC 7122]
Length = 454
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 169/313 (53%), Positives = 203/313 (64%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DE GVTRDR Y +FW + EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGDQAAIVHDEAGVTRDRTYRPAFWSDREFSVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ E+C IF+VDG
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQALMALSEACAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G AD+EIADWLR+ + I LAVNKCESP +G++Q SEFW LG P PISAI G
Sbjct: 94 QTGPMPADQEIADWLRQQPVP--IFLAVNKCESPDQGLIQASEFWELGLGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGE+LD + +K V +D V E+N I +AI+GRPNVGKSS+LNA VGE+R IVSP
Sbjct: 152 SGTGEILDEL---IKHVPDVKD-VPEDNVI-KVAIIGRPNVGKSSLLNAFVGEERAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD IDTE GQ +RLIDTAGIRK+ I TE S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDTIDTEIE-RNGQTYRLIDTAGIRKKKHIEYG---TEFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LV++A TEQ
Sbjct: 263 LLVLDAEDGATEQ 275
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 40/224 (17%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+ +VPE + +VAI+GRPNVGKS+L N VG RAIV G TRD + +
Sbjct: 168 VKDVPEDNVIKVAIIGRPNVGKSSLLNAFVGEERAIVSPISGTTRDTIDTEIERNGQTYR 227
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ + I T ++ R A AI +
Sbjct: 228 LIDTAGIRK-------------------KKHIEYGTEFFSINR--------AFKAIRRAD 260
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----L 329
V++ ++D + G T D+++A + + + I+ VNK ++ K + ++ L
Sbjct: 261 VVLLVLDAEDGATEQDQKLAGRIIEE--GRACIIVVNKWDAVEKDSYTIYDYEKTLETRL 318
Query: 330 GFSP----LPISAISGTGTGELLDLV--CSELKKVEGTEDLVEE 367
F+ + +SA +G ++L+LV +E K T +V E
Sbjct: 319 HFTEWADIIFVSATTGQRVEKILELVNKAAEAHKRRVTTSVVNE 362
>gi|428298257|ref|YP_007136563.1| GTP-binding protein engA [Calothrix sp. PCC 6303]
gi|428234801|gb|AFZ00591.1| GTP-binding protein engA [Calothrix sp. PCC 6303]
Length = 455
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 160/313 (51%), Positives = 205/313 (65%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL G AIV DEPG+TRDR Y SFW + EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTFMNRLSGEQTAIVHDEPGITRDRTYMPSFWRDREFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ E+ IF+V+G
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQAMLALAEASAAIFVVNG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GL AADEEI +WLR+ + ++LAVNKCESP +G++Q +EFWSLG P PISAI G
Sbjct: 94 QTGLCAADEEITEWLRQQPVP--VLLAVNKCESPDQGLIQAAEFWSLGLGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGEL+D + + L E++ E + +AI+GRPNVGKSS+LNA VGE+R IVSP
Sbjct: 152 SGTGELMDKLITYLPDTSNIEEVDEIK-----VAIIGRPNVGKSSLLNAFVGEERAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT +GQ +R+IDTAGIRK+ + E S+NRAF+AIRRSDVV
Sbjct: 207 ISGTTRDAIDT-IVEHDGQTYRIIDTAGIRKKKNVEYGA---EFFSINRAFKAIRRSDVV 262
Query: 462 ALVIEAMACITEQ 474
+VI+A+ +T+Q
Sbjct: 263 LMVIDAIDGVTDQ 275
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAG 429
++P +AI+GRPNVGKS+ +N L GE IV G TRD + ++F ++DT G
Sbjct: 2 KLPIVAIIGRPNVGKSTFMNRLSGEQTAIVHDEPGITRDRTYMP-SFWRDREFLVVDTGG 60
Query: 430 ------------IRKRAAIASSGSTTEALSVN 449
IR++A +A + ++ VN
Sbjct: 61 LVFNDDTEFLPLIRQQAMLALAEASAAIFVVN 92
>gi|354564931|ref|ZP_08984107.1| GTP-binding protein engA [Fischerella sp. JSC-11]
gi|353550057|gb|EHC19496.1| GTP-binding protein engA [Fischerella sp. JSC-11]
Length = 453
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 167/313 (53%), Positives = 209/313 (66%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV D+PGVTRDR Y +FW + EFM+VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQSAIVYDQPGVTRDRTYLPAFWRDREFMVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA AA+ E+ IF+VDG
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQAMAALAEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G TAADEEIA WLR+ + ++LAVNKCESP +G++Q +EFW+LG P P+SAI G
Sbjct: 94 RTGPTAADEEIATWLRQQPVP--VLLAVNKCESPEQGLIQAAEFWNLGLGEPFPVSAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG+LLD + + L+ V+ D+ E + IAIVGRPNVGKSS+LNA VGE+R IVSP
Sbjct: 152 SGTGDLLDKLINYLQPVQDLPDINEIK-----IAIVGRPNVGKSSLLNAFVGEERAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDTE GQ +RLIDTAGIRK+ + E S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDTEIER-NGQTYRLIDTAGIRKKKNVEYG---PEFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 263 LLVIDAIDGVTEQ 275
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAG 429
R+P +AI+GRPNVGKS+++N L GE IV G TRD + ++F ++DT G
Sbjct: 2 RLPIVAIIGRPNVGKSTLVNRLAGEQSAIVYDQPGVTRDRTYLPAFWRD-REFMVVDTGG 60
Query: 430 I 430
+
Sbjct: 61 L 61
>gi|119513020|ref|ZP_01632078.1| Small GTP-binding protein domain [Nodularia spumigena CCY9414]
gi|119462337|gb|EAW43316.1| Small GTP-binding protein domain [Nodularia spumigena CCY9414]
Length = 454
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/313 (52%), Positives = 209/313 (66%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y S+W + +F++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYMPSYWRDRDFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ ++ I +VDG
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQALTALSQASAAILVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLT +D+EIA WLR+ + ++LAVNKCESP +G +Q SEFW LG P PISAI G
Sbjct: 94 QTGLTGSDQEIATWLRQQPVP--VLLAVNKCESPDQGAVQASEFWGLGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + S + V TE VEE+N I +AI+GRPNVGKSS+LNA VGE+R+IVSP
Sbjct: 152 SGTGELLDELISHIPIV--TE--VEEDNEI-KVAIIGRPNVGKSSLLNAFVGEERSIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT + + Q +RLIDTAGIR++ I TE S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDTVISRND-QVYRLIDTAGIRRKKQIDYG---TEFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
+VI+A+ +T+Q
Sbjct: 263 LMVIDALDGVTDQ 275
>gi|220906981|ref|YP_002482292.1| GTP-binding protein EngA [Cyanothece sp. PCC 7425]
gi|254783149|sp|B8HQE1.1|DER_CYAP4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|219863592|gb|ACL43931.1| small GTP-binding protein [Cyanothece sp. PCC 7425]
Length = 453
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/316 (51%), Positives = 205/316 (64%), Gaps = 46/316 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NRL G AIV D+PGVTRDR Y SFW + +F++VDTGG++
Sbjct: 3 LPVVAIVGRPNVGKSTLVNRLTGERVAIVHDQPGVTRDRTYRPSFWQDRDFLVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ E +PL I +Q A+ E+ V I +VDG
Sbjct: 63 FADDT----------------EFLPL-------------IRQQVVTALSEARVAILVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+TAADEEIA WLR+ + +++AVNKCESP++G+ Q +EFW LG P PISAI G
Sbjct: 94 QQGITAADEEIAQWLRQQSLP--VLVAVNKCESPQQGLAQGAEFWELGLGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVE---GTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
GTGELLD V S L + G ED++ +AIVGRPNVGKSS+LNA+VGE R I
Sbjct: 152 NGTGELLDQVVSYLPPTDQQAGEEDIIN-------VAIVGRPNVGKSSLLNAVVGEQRAI 204
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VSPISGTTRDAIDT +GQ++RLIDTAGIRK+ + E +NRAF+AI+R+
Sbjct: 205 VSPISGTTRDAIDT-LVERDGQRYRLIDTAGIRKQKNVDYG---PEFFGINRAFKAIQRA 260
Query: 459 DVVALVIEAMACITEQ 474
+VV LV++A+ +TEQ
Sbjct: 261 EVVLLVLDALDGVTEQ 276
>gi|428214882|ref|YP_007088026.1| ribosome-associated GTPase EngA [Oscillatoria acuminata PCC 6304]
gi|428003263|gb|AFY84106.1| ribosome-associated GTPase EngA [Oscillatoria acuminata PCC 6304]
Length = 454
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 159/313 (50%), Positives = 200/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ GG +AIV DEPGVTRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRIAGGKQAIVHDEPGVTRDRTYRDAFWQDRDFQIVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I Q A+ ES V +F+VDG
Sbjct: 62 --------VFDD-------ETEFLPL-------------IREQVLTALSESSVALFIVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+T AD EIA+WLR + ++LAVNKCES +G+ Q +EFW LG P PISAI G
Sbjct: 94 QQGVTEADREIANWLRHQKVP--VVLAVNKCESLMEGLTQAAEFWELGMGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG+LLD+V L E++ E + +AIVGRPNVGKSS+LNA VGE R IVSP
Sbjct: 152 SGTGDLLDVVIPHLPPTSEIEEIPEIK-----VAIVGRPNVGKSSLLNAFVGEKRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD+IDT F G +R+IDTAGIRK+ + E +NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDSIDT-FVERNGTNYRIIDTAGIRKKKNVEYG---PEFFGINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 263 LLVIDAIDGVTEQ 275
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 371 IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGI 430
+P +AI+GRPNVGKS+++N + G + IV G TRD + + + F+++DT G+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRIAGGKQAIVHDEPGVTRDRTYRD-AFWQDRDFQIVDTGGL 61
Query: 431 RKRAAIASSGSTTEALSVNR--AFRAIRRSDVVALVIEAMACITEQ----ADWRDHR 481
TE L + R A+ S V +++ +TE A+W H+
Sbjct: 62 -------VFDDETEFLPLIREQVLTALSESSVALFIVDGQQGVTEADREIANWLRHQ 111
>gi|428771278|ref|YP_007163068.1| GTP-binding protein engA [Cyanobacterium aponinum PCC 10605]
gi|428685557|gb|AFZ55024.1| GTP-binding protein engA [Cyanobacterium aponinum PCC 10605]
Length = 453
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 160/314 (50%), Positives = 203/314 (64%), Gaps = 41/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAI+GRPNVGKSAL NRL G AIV D+PGVTRDR Y R+FW + EF +VDTGG+
Sbjct: 1 MLPIVAIIGRPNVGKSALVNRLCGEQDAIVFDQPGVTRDRTYRRAFWQDREFQVVDTGGL 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D E +PL I QA AA+ ES V IF+VD
Sbjct: 61 ---------VFDDET-------EFLPL-------------IREQAEAALSESVVAIFVVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GLTA DEEIA WLR + ++LAVNKCES +G+ +EFW+LG P PISAI
Sbjct: 92 GKLGLTAGDEEIASWLRSQPVP--VVLAVNKCESETQGLTLAAEFWNLGLGEPFPISAIH 149
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG+LL+ V + ++ E++ E + +AIVGRPNVGKSS+LNAL GE R IVS
Sbjct: 150 GNGTGDLLEKVTEYVPSMDEWEEVEETK-----VAIVGRPNVGKSSLLNALTGEKRAIVS 204
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PISGTTRDAID +G+ +RLIDTAGIR++ + TE S+NRAF+AI+R+DV
Sbjct: 205 PISGTTRDAIDM-VVERDGKTYRLIDTAGIRRKKNVDYG---TEFFSINRAFKAIKRADV 260
Query: 461 VALVIEAMACITEQ 474
V VI+ + +TEQ
Sbjct: 261 VLFVIDVLDGVTEQ 274
>gi|218437880|ref|YP_002376209.1| GTP-binding protein EngA [Cyanothece sp. PCC 7424]
gi|226741132|sp|B7KHD2.1|DER_CYAP7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|218170608|gb|ACK69341.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
Length = 452
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 163/313 (52%), Positives = 200/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G +AIV DEPG+TRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGDQQAIVHDEPGITRDRTYRPAFWQDRDFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA A+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAMTALAEAHAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T ADEEIA+WLR + IILAVNKCES +G++Q SEFW LG P PIS+I G
Sbjct: 94 QTGPTPADEEIANWLRSQSVP--IILAVNKCESVEQGLIQASEFWQLGLGEPYPISSIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + L E + E N I +AIVGRPNVGKSS+LNAL GE+R IVSP
Sbjct: 152 SGTGELLDKLIIYLPTTES----LSETNEI-KVAIVGRPNVGKSSLLNALTGENRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAID E Q++RLIDTAGIR++ + E S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDMVVQRNE-QQYRLIDTAGIRRKKNVEYGA---EFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
VI+A+ IT+Q
Sbjct: 263 LFVIDALDGITDQ 275
>gi|428779671|ref|YP_007171457.1| ribosome-associated GTPase EngA [Dactylococcopsis salina PCC 8305]
gi|428693950|gb|AFZ50100.1| ribosome-associated GTPase EngA [Dactylococcopsis salina PCC 8305]
Length = 456
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 158/313 (50%), Positives = 200/313 (63%), Gaps = 39/313 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR G AIV DEPG+TRDR+Y SFW + +F++VDTGG++
Sbjct: 4 LPIVAIIGRPNVGKSTLVNRFTGSRTAIVHDEPGITRDRLYQPSFWRDRDFLVVDTGGIV 63
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +P I +QA A+ E+ IF+VDG
Sbjct: 64 FDDDS----------------EFLP-------------EIRQQAMMALAEAVAAIFVVDG 94
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+TAADEEI +WLR+ + F LAVNKCES +G++Q ++FW LG PLP+S I G
Sbjct: 95 QEGITAADEEIGNWLRQQNVPYF--LAVNKCESSEQGLIQAAQFWELGLGEPLPVSGIHG 152
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG+LLD V S ++ D E E + AI+GRPNVGKSS+LNAL G R+IVSP
Sbjct: 153 SGTGDLLDAVLSCFPPLDDLPDADETEINV---AIIGRPNVGKSSLLNALTGVSRSIVSP 209
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAID + +GQ +RLIDTAGIRK+ I+ E S+NRAF+AIRR DV
Sbjct: 210 ISGTTRDAIDLQIEH-QGQSYRLIDTAGIRKKKNISYGA---EFFSINRAFKAIRRCDVS 265
Query: 462 ALVIEAMACITEQ 474
LVI+A+ IT+Q
Sbjct: 266 LLVIDALDSITDQ 278
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 369 NRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTA 428
++P +AI+GRPNVGKS+++N G IV G TRD + + + + F ++DT
Sbjct: 2 KKLPIVAIIGRPNVGKSTLVNRFTGSRTAIVHDEPGITRDRL-YQPSFWRDRDFLVVDTG 60
Query: 429 GI 430
GI
Sbjct: 61 GI 62
>gi|425436820|ref|ZP_18817251.1| GTPase Der [Microcystis aeruginosa PCC 9432]
gi|389678397|emb|CCH92742.1| GTPase Der [Microcystis aeruginosa PCC 9432]
Length = 452
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 159/313 (50%), Positives = 196/313 (62%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QAGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD V L EN +AI+GRPNVGKSS+LNAL G+ R IVSP
Sbjct: 152 SGTGELLDAVIKYLPPAAAI-----PENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD+IDT EGQ +RLIDTAGIR++ + E S+NRAF+AIRRSDVV
Sbjct: 207 ISGTTRDSIDT-LIEREGQVYRLIDTAGIRRKKNVDYGA---EFFSINRAFKAIRRSDVV 262
Query: 462 ALVIEAMACITEQ 474
VI+ + +TEQ
Sbjct: 263 LFVIDVLDGVTEQ 275
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A R + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAG--RIIEEGRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAG 429
++P +AI+GRPNVGKS+++N + G+ + IV G TRD + + F+++DT G
Sbjct: 2 KLPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCD-RDFQIVDTGG 60
Query: 430 IRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACIT----EQADW 477
+ + + S L +A A+ + V V++ A IT E A W
Sbjct: 61 L-----VFNDDSEFLPLIREQALIALAEASVAIFVVDGQAGITAGDREIAAW 107
>gi|440753934|ref|ZP_20933136.1| ribosome-associated GTPase EngA [Microcystis aeruginosa TAIHU98]
gi|440174140|gb|ELP53509.1| ribosome-associated GTPase EngA [Microcystis aeruginosa TAIHU98]
Length = 452
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 161/313 (51%), Positives = 199/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QAGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD V L G E EE + +AI+GRPNVGKSS+LNAL G+ R IVSP
Sbjct: 152 SGTGELLDAVIKYLPP--GAEIPENEEIK---VAIIGRPNVGKSSLLNALTGQQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD+IDT EGQ +RLIDTAGIR++ + E S+NRAF+AIRRSDVV
Sbjct: 207 ISGTTRDSIDT-LIEREGQVYRLIDTAGIRRKKNVDYGA---EFFSINRAFKAIRRSDVV 262
Query: 462 ALVIEAMACITEQ 474
VI+ + +TEQ
Sbjct: 263 LFVIDVLDGVTEQ 275
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A + + + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAGRIIEE--GRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAG 429
++P +AI+GRPNVGKS+++N + G+ + IV G TRD + + F+++DT G
Sbjct: 2 KLPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCD-RDFQIVDTGG 60
Query: 430 IRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACIT----EQADW 477
+ + + S L +A A+ + V V++ A IT E A W
Sbjct: 61 L-----VFNDDSEFLPLIREQALIALAEASVAIFVVDGQAGITAGDREIAAW 107
>gi|443311191|ref|ZP_21040823.1| ribosome-associated GTPase EngA [Synechocystis sp. PCC 7509]
gi|442778721|gb|ELR88982.1| ribosome-associated GTPase EngA [Synechocystis sp. PCC 7509]
Length = 458
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 157/313 (50%), Positives = 200/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS + NRL G AIV DEPG+TRDR Y ++WG+ +F++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTIVNRLAGTGAAIVYDEPGITRDRTYVNAYWGDRDFVVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +P I QA A++E+ +F+VDG
Sbjct: 62 --------VFDD-------DTEFLP-------------QIREQAALALKEASAALFIVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG+ AADEEIA WLR+ + ++LAVNKCES G+ Q S+FW LG P P+S I G
Sbjct: 94 QAGICAADEEIAQWLRQQSVP--VVLAVNKCESAELGLSQASQFWELGLGEPFPMSGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD V + L E D+ E + IAIVGRPNVGKSS+LNA VGE+R IVSP
Sbjct: 152 NGTGELLDAVVAHLPLAEDLPDVDEVK-----IAIVGRPNVGKSSLLNAFVGENRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT +G+ +RLIDTAGIR++ + E +NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDTVIE-RDGKTYRLIDTAGIRRKKNVEYGA---EFFGINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LV++A +TEQ
Sbjct: 263 LLVLDAEDGVTEQ 275
>gi|147785731|emb|CAN73088.1| hypothetical protein VITISV_030762 [Vitis vinifera]
Length = 344
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 138/158 (87%), Positives = 149/158 (94%), Gaps = 1/158 (0%)
Query: 321 MQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRP 380
MQ EFWSLGF+PLPISA+SGTGTGELLDLVCS LKK+E E+L EEN +PAIAIVGRP
Sbjct: 1 MQALEFWSLGFTPLPISAVSGTGTGELLDLVCSGLKKIEDPENLDGEENYVPAIAIVGRP 60
Query: 381 NVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSG 440
NVGKSSILNALVGEDRTIVSP+SGTTRDAIDTEFTGP+GQK+RLIDTAGIR+RAA+ASSG
Sbjct: 61 NVGKSSILNALVGEDRTIVSPVSGTTRDAIDTEFTGPDGQKYRLIDTAGIRRRAAVASSG 120
Query: 441 STTEALSVNRAFRAIRRSDVVALVIEAMACITEQADWR 478
STTEALSVNRAFRAIRRSDVVALVIEAMACITEQ D+R
Sbjct: 121 STTEALSVNRAFRAIRRSDVVALVIEAMACITEQ-DYR 157
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 47/198 (23%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVD 217
E+ +P +AIVGRPNVGKS++ N LVG +R IV G TRD + F G ++ L+D
Sbjct: 48 ENYVPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAI-DTEFTGPDGQKYRLID 106
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE----RQATAAIEES 273
T G+ R AAVA S E +A AI S
Sbjct: 107 TAGI----------------------------RRRAAVASSGSTTEALSVNRAFRAIRRS 138
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS----- 328
V+ +++ A +T D IA+ + + K ++ VNK ++ Q + ++
Sbjct: 139 DVVALVIEAMACITEQDYRIAERIERE--GKGCLIVVNKWDTIPNKNQQTATYYEQDVRE 196
Query: 329 ----LGFSPLPIS-AISG 341
LG++P+ S AI+G
Sbjct: 197 KLRVLGWAPIVYSTAIAG 214
>gi|428221421|ref|YP_007105591.1| ribosome-associated GTPase EngA [Synechococcus sp. PCC 7502]
gi|427994761|gb|AFY73456.1| ribosome-associated GTPase EngA [Synechococcus sp. PCC 7502]
Length = 460
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 155/316 (49%), Positives = 200/316 (63%), Gaps = 42/316 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKSAL NRL G N AIV D+PG+TRDR Y +FW H+F +VDTGG++
Sbjct: 3 LPIVAVVGRPNVGKSALVNRLTGENYAIVYDQPGITRDRTYRPAFWNGHDFTIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ E +P MI +QA AIE+SC +IF+VDG
Sbjct: 63 FADDT----------------EFLP-------------MIRQQAFVAIEQSCAVIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+TAAD +IA WLR+ + ++LAVNKCES G+ Q +EFW LG P+ +S++ G
Sbjct: 94 MTGITAADWQIAQWLREQSVP--VVLAVNKCESMNLGMAQAAEFWQLGLGEPIALSSLHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + L D VE E+ +AI+GRPNVGKSS+LNA GE+R IVSP
Sbjct: 152 NGTGELLDALVQHLPD----PDTVEPESDEIKVAIIGRPNVGKSSLLNAFTGEERCIVSP 207
Query: 402 ISGTTRDAID---TEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
I+GTTRDAID + E + +RLIDTAGIR++ + E S+NRAF+AI RS
Sbjct: 208 IAGTTRDAIDMIVSRTVNGEERNYRLIDTAGIRRKRGVEYGA---EFFSINRAFKAISRS 264
Query: 459 DVVALVIEAMACITEQ 474
DVV LVI+A+ +T+Q
Sbjct: 265 DVVLLVIDAIDGVTDQ 280
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 53/225 (23%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTR---DRMYGRSFWG-EHEFM 214
PE +VAI+GRPNVGKS+L N G R IV G TR D + R+ G E +
Sbjct: 173 PESDEIKVAIIGRPNVGKSSLLNAFTGEERCIVSPIAGTTRDAIDMIVSRTVNGEERNYR 232
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ G+ ++ R A AI S
Sbjct: 233 LIDTAGIRR-------------------KRGVEYGAEFFSINR--------AFKAISRSD 265
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------ 328
V++ ++D G+T D+++A R N K +L +NK ++ K + ++
Sbjct: 266 VVLLVIDAIDGVTDQDQKLAG--RINDEGKACVLVINKWDAVEKDSYTIYDYTEQVQSRM 323
Query: 329 --LGFSP-LPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENR 370
+ ++P + +SA++G ++LD V D+V E++R
Sbjct: 324 MFVDYAPVIFVSALTGQRVPKILDQV-----------DIVAEQHR 357
>gi|390441692|ref|ZP_10229732.1| GTPase Der [Microcystis sp. T1-4]
gi|389835005|emb|CCI33858.1| GTPase Der [Microcystis sp. T1-4]
Length = 452
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 160/313 (51%), Positives = 199/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QAGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + L G E EE + +AI+GRPNVGKSS+LNAL G+ R IVSP
Sbjct: 152 SGTGELLDALIKYLPP--GAEIPENEEIK---VAIIGRPNVGKSSLLNALTGQQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD+IDT EGQ +RLIDTAGIR++ + E S+NRAF+AIRRSDVV
Sbjct: 207 ISGTTRDSIDT-LIEREGQVYRLIDTAGIRRKKNVDYGA---EFFSINRAFKAIRRSDVV 262
Query: 462 ALVIEAMACITEQ 474
VI+ + +TEQ
Sbjct: 263 LFVIDVLDGVTEQ 275
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A + + + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAGRIIEE--GRAVVLVVNKWDAVEKDTYTINTYTKILQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAG 429
++P +AI+GRPNVGKS+++N + G+ + IV G TRD + + F+++DT G
Sbjct: 2 KLPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCD-RDFQIVDTGG 60
Query: 430 IRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACIT----EQADW 477
+ + + S L +A A+ + V V++ A IT E A W
Sbjct: 61 L-----VFNDDSEFLPLIREQALIALAEASVAIFVVDGQAGITAGDREIAAW 107
>gi|422302781|ref|ZP_16390140.1| GTPase Der [Microcystis aeruginosa PCC 9806]
gi|425466062|ref|ZP_18845365.1| GTPase Der [Microcystis aeruginosa PCC 9809]
gi|389787937|emb|CCI16786.1| GTPase Der [Microcystis aeruginosa PCC 9806]
gi|389831589|emb|CCI25539.1| GTPase Der [Microcystis aeruginosa PCC 9809]
Length = 452
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/313 (50%), Positives = 195/313 (62%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QGGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD V L EN +AI+GRPNVGKSS+LNAL G+ R IVSP
Sbjct: 152 SGTGELLDAVIKYLPPAAAI-----PENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD+IDT EGQ +RLIDTAGIR++ + E S+NRAF+AIRRSDVV
Sbjct: 207 ISGTTRDSIDT-LIEREGQVYRLIDTAGIRRKKNVDYGA---EFFSINRAFKAIRRSDVV 262
Query: 462 ALVIEAMACITEQ 474
VI+ + +TEQ
Sbjct: 263 LFVIDVLDGVTEQ 275
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A + + + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAGRIIEE--GRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAG 429
++P +AI+GRPNVGKS+++N + G+ + IV G TRD + + F+++DT G
Sbjct: 2 KLPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCD-RDFQIVDTGG 60
Query: 430 IRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACIT----EQADW 477
+ + + S L +A A+ + V V++ IT E A W
Sbjct: 61 L-----VFNDDSEFLPLIREQALIALAEASVAIFVVDGQGGITAGDREIAAW 107
>gi|425449723|ref|ZP_18829559.1| GTPase Der [Microcystis aeruginosa PCC 7941]
gi|389769807|emb|CCI05487.1| GTPase Der [Microcystis aeruginosa PCC 7941]
Length = 452
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 160/313 (51%), Positives = 199/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QAGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + L G E EE + +AI+GRPNVGKSS+LNAL G+ R IVSP
Sbjct: 152 SGTGELLDALIKYLPP--GAEIPENEEIK---VAIIGRPNVGKSSLLNALTGQQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD+IDT EGQ +RLIDTAGIR++ + E S+NRAF+AIRRSDVV
Sbjct: 207 ISGTTRDSIDT-LIEREGQVYRLIDTAGIRRKKNVDYGA---EFFSINRAFKAIRRSDVV 262
Query: 462 ALVIEAMACITEQ 474
VI+ + +TEQ
Sbjct: 263 LFVIDVLDGVTEQ 275
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A + + + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAGRIIEE--GRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAG 429
++P +AI+GRPNVGKS+++N + G+ + IV G TRD + + F+++DT G
Sbjct: 2 KLPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCD-RDFQIVDTGG 60
Query: 430 IRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACIT----EQADW 477
+ + + S L +A A+ + V V++ A IT E A W
Sbjct: 61 L-----VFNDDSEFLPLIREQALIALAEASVAIFVVDGQAGITAGDREIAAW 107
>gi|425462207|ref|ZP_18841681.1| GTPase Der [Microcystis aeruginosa PCC 9808]
gi|443648023|ref|ZP_21129853.1| ribosome-associated GTPase EngA [Microcystis aeruginosa DIANCHI905]
gi|159028658|emb|CAO88129.1| engA [Microcystis aeruginosa PCC 7806]
gi|389824795|emb|CCI25954.1| GTPase Der [Microcystis aeruginosa PCC 9808]
gi|443335289|gb|ELS49764.1| ribosome-associated GTPase EngA [Microcystis aeruginosa DIANCHI905]
Length = 452
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 160/313 (51%), Positives = 199/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QAGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + L G E EE + +AI+GRPNVGKSS+LNAL G+ R IVSP
Sbjct: 152 SGTGELLDALIKYLPP--GAEIPENEEIK---VAIIGRPNVGKSSLLNALTGQQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD+IDT EGQ +RLIDTAGIR++ + E S+NRAF+AIRRSDVV
Sbjct: 207 ISGTTRDSIDT-LIEREGQVYRLIDTAGIRRKKNVDYGA---EFFSINRAFKAIRRSDVV 262
Query: 462 ALVIEAMACITEQ 474
VI+ + +TEQ
Sbjct: 263 LFVIDVLDGVTEQ 275
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A + + + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAGRIIEE--GRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAG 429
++P +AI+GRPNVGKS+++N + G+ + IV G TRD + + F+++DT G
Sbjct: 2 KLPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCD-RDFQIVDTGG 60
Query: 430 IRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACIT----EQADW 477
+ + + S L +A A+ + V V++ A IT E A W
Sbjct: 61 L-----VFNDDSEFLPLIREQALIALAEASVAIFVVDGQAGITAGDREIAAW 107
>gi|428313357|ref|YP_007124334.1| ribosome-associated GTPase EngA [Microcoleus sp. PCC 7113]
gi|428254969|gb|AFZ20928.1| ribosome-associated GTPase EngA [Microcoleus sp. PCC 7113]
Length = 464
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/320 (50%), Positives = 198/320 (61%), Gaps = 47/320 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA++GRPNVGKS L NRL G AIV DEPGVTRDR Y FW + EF++VDTGG+
Sbjct: 3 LPIVAVIGRPNVGKSTLVNRLAGVTDAIVHDEPGVTRDRTYRPGFWQDREFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ ES IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAMAALAESSAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T ADE IA+WLR+ + F LAVNKCESP++GI+Q S+FW LG P P+S I G
Sbjct: 94 QEGPTPADETIAEWLRQQSVPFF--LAVNKCESPQQGIIQSSQFWELGLGEPFPVSGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G GELLD + + L+ VE + E +AIVGRPNVGKSS+LNA GE+R IVSP
Sbjct: 152 NGLGELLDELITHLEPVE-----IPSETSEIKVAIVGRPNVGKSSLLNAFTGENRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGP-------EGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRA 454
ISGTTRDAID P E + +RLIDTAGIRK+ + E +NRAF+A
Sbjct: 207 ISGTTRDAIDMVVERPGKAEKEGESKTYRLIDTAGIRKKKNVDYG---PEFFGINRAFKA 263
Query: 455 IRRSDVVALVIEAMACITEQ 474
IRRSDVV +VI+A+ +TEQ
Sbjct: 264 IRRSDVVLMVIDALDGVTEQ 283
>gi|443478697|ref|ZP_21068418.1| GTP-binding protein engA [Pseudanabaena biceps PCC 7429]
gi|443015977|gb|ELS30741.1| GTP-binding protein engA [Pseudanabaena biceps PCC 7429]
Length = 452
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 157/313 (50%), Positives = 204/313 (65%), Gaps = 40/313 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS L NRL G AIV D+PGVTRDR+Y FWG HEF +VDTGG+
Sbjct: 3 LPIVAVVGRPNVGKSTLVNRLSGEQYAIVYDQPGVTRDRVYRECFWGAHEFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +P MI QA AI ES +IF+VDG
Sbjct: 62 --------VFDDET-------EFLP-------------MIREQAEIAIRESAAVIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
AG+T ADE++ WLR+ + ++LAVNKCE + G+ +EFW+LG P+P+S I G
Sbjct: 94 LAGITDADEQLGGWLRRQNIP--VLLAVNKCEGSKYGLSLAAEFWNLGLGEPIPMSGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + +K + E++V E + I +AI+GRPNVGKSS+LNA +GE+R+IVSP
Sbjct: 152 NGTGELLDEL---VKHLPPPEEVVAESDEI-KVAIIGRPNVGKSSLLNAFIGENRSIVSP 207
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAID +G+K+RLIDTAG+R++ I E S+NRAF+AI RSDVV
Sbjct: 208 ISGTTRDAIDMSVE-RDGKKYRLIDTAGVRRKKNIDYG---IEFFSINRAFKAIGRSDVV 263
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 264 LLVIDALDGVTDQ 276
>gi|428206730|ref|YP_007091083.1| ribosome-associated GTPase EngA [Chroococcidiopsis thermalis PCC
7203]
gi|428008651|gb|AFY87214.1| ribosome-associated GTPase EngA [Chroococcidiopsis thermalis PCC
7203]
Length = 452
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 157/313 (50%), Positives = 200/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NRL G AIV DEPGVTRDR Y ++W + EF++VDTGG+
Sbjct: 3 LPIVAIVGRPNVGKSTLANRLAGVQEAIVYDEPGVTRDRTYMPAYWCDREFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I +Q A+ E+ ++F+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IRQQVMVALSEASAVLFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G ADEE+A WLR+ + ++LAVNKCESP +G+MQ ++FW LG P +S I G
Sbjct: 94 QTGPLPADEEVAAWLRQQSLP--VLLAVNKCESPEQGLMQAAQFWELGLGEPYAVSGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG+LLD + + L + E + N I A+AIVGRPNVGKSS+LNA VGE R IVSP
Sbjct: 152 NGTGDLLDQLIAHLPQPEE----ITPTNEI-AVAIVGRPNVGKSSLLNAFVGESRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD+IDT +GQ +RLIDTAGIRK+ + E +NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDSIDT-VVEHQGQTYRLIDTAGIRKKKNVEYG---PEFFGINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 263 LLVIDALDGVTEQ 275
>gi|425444703|ref|ZP_18824749.1| GTPase Der [Microcystis aeruginosa PCC 9443]
gi|425454422|ref|ZP_18834162.1| GTPase Der [Microcystis aeruginosa PCC 9807]
gi|389735514|emb|CCI01008.1| GTPase Der [Microcystis aeruginosa PCC 9443]
gi|389804906|emb|CCI15700.1| GTPase Der [Microcystis aeruginosa PCC 9807]
Length = 452
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 158/313 (50%), Positives = 196/313 (62%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QAGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + L EN +AI+GRPNVGKSS+LNAL G+ R IVSP
Sbjct: 152 SGTGELLDALIKYLPPGAAI-----PENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD+IDT EGQ +RLIDTAGIR++ + E S+NRAF+AIRRSDVV
Sbjct: 207 ISGTTRDSIDT-LIEREGQVYRLIDTAGIRRKKNVDYGA---EFFSINRAFKAIRRSDVV 262
Query: 462 ALVIEAMACITEQ 474
VI+ + +TEQ
Sbjct: 263 LFVIDVLDGVTEQ 275
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A R + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAG--RIIEEGRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAG 429
++P +AI+GRPNVGKS+++N + G+ + IV G TRD + + F+++DT G
Sbjct: 2 KLPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCD-RDFQIVDTGG 60
Query: 430 IRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACIT----EQADW 477
+ + + S L +A A+ + V V++ A IT E A W
Sbjct: 61 L-----VFNDDSEFLPLIREQALIALAEASVAIFVVDGQAGITAGDREIAAW 107
>gi|425470890|ref|ZP_18849750.1| GTPase Der [Microcystis aeruginosa PCC 9701]
gi|389883325|emb|CCI36268.1| GTPase Der [Microcystis aeruginosa PCC 9701]
Length = 452
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 158/313 (50%), Positives = 195/313 (62%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QGGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD V L EN +AI+GRPNVGKSS+LNAL G+ R IVSP
Sbjct: 152 SGTGELLDAVIKYLPPAAEI-----PENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD+IDT EGQ +RLIDTAGIR++ + E S+NRAF+AIRRSDVV
Sbjct: 207 ISGTTRDSIDT-LIEREGQVYRLIDTAGIRRKKNVDYGA---EFFSINRAFKAIRRSDVV 262
Query: 462 ALVIEAMACITEQ 474
VI+ + +TEQ
Sbjct: 263 LFVIDVLDGVTEQ 275
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A + + + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAGRIIEE--GRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAG 429
++P +AI+GRPNVGKS+++N + G+ + IV G TRD + + F+++DT G
Sbjct: 2 KLPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCD-RDFQIVDTGG 60
Query: 430 IRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACIT----EQADW 477
+ + + S L +A A+ + V V++ IT E A W
Sbjct: 61 L-----VFNDDSEFLPLIREQALIALAEASVAIFVVDGQGGITAGDREIAAW 107
>gi|166362822|ref|YP_001655095.1| GTP-binding protein EngA [Microcystis aeruginosa NIES-843]
gi|425441648|ref|ZP_18821918.1| GTPase Der [Microcystis aeruginosa PCC 9717]
gi|189037151|sp|B0JFL6.1|DER_MICAN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166085195|dbj|BAF99902.1| GTP binding protein [Microcystis aeruginosa NIES-843]
gi|389717577|emb|CCH98352.1| GTPase Der [Microcystis aeruginosa PCC 9717]
Length = 452
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 158/313 (50%), Positives = 195/313 (62%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QGGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD V L EN +AI+GRPNVGKSS+LNAL G+ R IVSP
Sbjct: 152 SGTGELLDAVIKYLPPAAEI-----PENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD+IDT EGQ +RLIDTAGIR++ + E S+NRAF+AIRRSDVV
Sbjct: 207 ISGTTRDSIDT-LIEREGQVYRLIDTAGIRRKKNVDYGA---EFFSINRAFKAIRRSDVV 262
Query: 462 ALVIEAMACITEQ 474
VI+ + +TEQ
Sbjct: 263 LFVIDVLDGVTEQ 275
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A + + + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAGRIIEE--GRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAG 429
++P +AI+GRPNVGKS+++N + G+ + IV G TRD + + F+++DT G
Sbjct: 2 KLPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCD-RDFQIVDTGG 60
Query: 430 IRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACIT----EQADW 477
+ + + S L +A A+ + V V++ IT E A W
Sbjct: 61 L-----VFNDDSEFLPLIREQALIALAEASVAIFVVDGQGGITAGDREIAAW 107
>gi|416389579|ref|ZP_11685375.1| GTP-binding protein EngA [Crocosphaera watsonii WH 0003]
gi|357264204|gb|EHJ13122.1| GTP-binding protein EngA [Crocosphaera watsonii WH 0003]
Length = 465
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 158/313 (50%), Positives = 201/313 (64%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL +AIV DEPG+TRDR Y +FW + +F +VDTGG+
Sbjct: 16 LPIVAIIGRPNVGKSTFVNRLAKDRQAIVHDEPGITRDRTYRPAFWADRDFQVVDTGGL- 74
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ V IF+VDG
Sbjct: 75 --------VFDD-------ETEFLPL-------------IREQAMAALTEASVAIFVVDG 106
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLTA D EIADWLR+ + ++LAVNKCESP +G++Q +EFW LG P P+S I G
Sbjct: 107 QLGLTAGDSEIADWLRQQEVP--VLLAVNKCESPDQGLIQAAEFWELGLGEPYPVSGIHG 164
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + + L + D EE N ++I+GRPNVGKSS+LNA +GE R IVSP
Sbjct: 165 NGTGELLDELITYLPSPDELPDR-EEIN----VSIIGRPNVGKSSLLNAFLGEKRAIVSP 219
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT E + +RLIDTAGIR++ + E S+NRAF+AIRR+DVV
Sbjct: 220 ISGTTRDAIDTVVERGE-KTYRLIDTAGIRRKKNVNYGA---EFFSINRAFKAIRRADVV 275
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 276 LLVIDAIEGVTDQ 288
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 38/195 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+I+GRPNVGKS+L N +G RAIV G TRD + GE + L+DT G+
Sbjct: 192 VSIIGRPNVGKSSLLNAFLGEKRAIVSPISGTTRDAIDTVVERGEKTYRLIDTAGI---- 247
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + N+ G E + +A AI + V++ ++D G
Sbjct: 248 RRKKNV--------NYGAEFFSI---------------NRAFKAIRRADVVLLVIDAIEG 284
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP---------I 336
+T D ++AD R + I+ VNK ++ K + E+ S L +
Sbjct: 285 VTDQDIKLAD--RIIDEGRAAIIVVNKWDAIDKDSYTIYEYKKKVMSRLYFMEWADLIFV 342
Query: 337 SAISGTGTGELLDLV 351
SA+SG ++ LV
Sbjct: 343 SAMSGKRVEKIFKLV 357
>gi|427739309|ref|YP_007058853.1| ribosome-associated GTPase EngA [Rivularia sp. PCC 7116]
gi|427374350|gb|AFY58306.1| ribosome-associated GTPase EngA [Rivularia sp. PCC 7116]
Length = 456
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/314 (52%), Positives = 201/314 (64%), Gaps = 43/314 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS + NRL AIV DEPGVTRDR Y +FW + EFM+VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTIVNRLAKQQSAIVHDEPGVTRDRTYLSAFWRDREFMVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I D E +P I +QA A+ E+ IF+VDG
Sbjct: 62 --------IFND-------DTEFLPF-------------IRQQAMVALSEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T AD EIA+WLR + + ++LAVNKCESP +G+M ++FW LG P P+S I G
Sbjct: 94 QTGATPADLEIAEWLRHHPVP--VLLAVNKCESPDQGLMLAADFWQLGLGEPYPMSGIHG 151
Query: 342 TGTGELLDLVCSELKKV-EGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTGELLD + + L V E T+D EE + IAI+GRPNVGKSS+LN+ GE+R IVS
Sbjct: 152 NGTGELLDELINFLPPVSEVTQD---EEIK---IAIIGRPNVGKSSLLNSFAGEERAIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PISGTTRDAIDT F + Q +RLIDTAGIRK+ I TE S+NRAF+AIRRSDV
Sbjct: 206 PISGTTRDAIDT-FIEKDEQVYRLIDTAGIRKKKNIDYG---TEFFSINRAFKAIRRSDV 261
Query: 461 VALVIEAMACITEQ 474
V VI+A+ IT+Q
Sbjct: 262 VLFVIDALDGITDQ 275
>gi|307152641|ref|YP_003888025.1| ribosome-associated GTPase EngA [Cyanothece sp. PCC 7822]
gi|306982869|gb|ADN14750.1| ribosome-associated GTPase EngA [Cyanothece sp. PCC 7822]
Length = 452
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 159/313 (50%), Positives = 199/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G +AIV DEPG+TRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGDQQAIVHDEPGITRDRTYRPAFWQDRDFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAMAALTEANAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q+G TA D+EIADWLR + ++LAVNKCES +GI+Q S+FW LG P PISAI G
Sbjct: 94 QSGPTAGDQEIADWLRSQSVP--VLLAVNKCESVEQGIIQASQFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG+LLD + + L + G V E + I +AIVGRPNVGKSS+LNA G+ R IVSP
Sbjct: 152 NGTGDLLDQLITYL-PLSGE---VPENDEI-KVAIVGRPNVGKSSLLNAFTGQQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD IDT GQ +RLIDTAGIR++ + E +NRAF+AIRRSDVV
Sbjct: 207 ISGTTRDTIDT-IIERNGQHYRLIDTAGIRRKKNVEYGA---EFFGINRAFKAIRRSDVV 262
Query: 462 ALVIEAMACITEQ 474
V++A+ IT+Q
Sbjct: 263 LFVVDALDGITDQ 275
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 97/208 (46%), Gaps = 44/208 (21%)
Query: 156 GNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTR---DRMYGRSFWGEHE 212
G VPE+ +VAIVGRPNVGKS+L N G RAIV G TR D + R+ G+H
Sbjct: 169 GEVPENDEIKVAIVGRPNVGKSSLLNAFTGQQRAIVSPISGTTRDTIDTIIERN--GQH- 225
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
+ L+DT G+ + + N+ G E + +A AI
Sbjct: 226 YRLIDTAGI----RRKKNV--------EYGAEFFGI---------------NRAFKAIRR 258
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS 332
S V++F+VD G+T D ++A R + IL VNK ++ K + E+ + S
Sbjct: 259 SDVVLFVVDALDGITDQDLKLAG--RIIDEGRATILVVNKWDAVEKDSYTIYEYQKILGS 316
Query: 333 PLP---------ISAISGTGTGELLDLV 351
L +SA++G ++LDLV
Sbjct: 317 RLYFMDWAEMIFVSALTGQRVEKILDLV 344
>gi|67922213|ref|ZP_00515727.1| Small GTP-binding protein domain:GTP-binding [Crocosphaera watsonii
WH 8501]
gi|67855916|gb|EAM51161.1| Small GTP-binding protein domain:GTP-binding [Crocosphaera watsonii
WH 8501]
Length = 465
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/313 (50%), Positives = 201/313 (64%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL +AIV DEPG+TRDR Y +FW + +F +VDTGG+
Sbjct: 16 LPIVAIIGRPNVGKSTFVNRLAKDRQAIVHDEPGITRDRTYRPAFWADRDFQVVDTGGL- 74
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ V IF+VDG
Sbjct: 75 --------VFDD-------ETEFLPL-------------IREQAMAALTEASVAIFVVDG 106
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLTA D EIADWLR+ + ++LAVNKCESP +G++Q +EFW LG P P+S I G
Sbjct: 107 QLGLTAGDSEIADWLRQQEVP--VLLAVNKCESPDQGLIQAAEFWELGLGEPYPVSGIHG 164
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + + L + D EE N ++I+GRPNVGKSS+LNA +G+ R IVSP
Sbjct: 165 NGTGELLDELITYLPSPDELPDR-EEIN----VSIIGRPNVGKSSLLNAFLGKKRAIVSP 219
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT E + +RLIDTAGIR++ + E S+NRAF+AIRR+DVV
Sbjct: 220 ISGTTRDAIDTVVERGE-KTYRLIDTAGIRRKKNVNYGA---EFFSINRAFKAIRRADVV 275
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 276 LLVIDAIEGVTDQ 288
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 38/195 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+I+GRPNVGKS+L N +G RAIV G TRD + GE + L+DT G+
Sbjct: 192 VSIIGRPNVGKSSLLNAFLGKKRAIVSPISGTTRDAIDTVVERGEKTYRLIDTAGI---- 247
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + N+ G E + +A AI + V++ ++D G
Sbjct: 248 RRKKNV--------NYGAEFFSI---------------NRAFKAIRRADVVLLVIDAIEG 284
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP---------I 336
+T D ++AD R + I+ VNK ++ K + E+ S L +
Sbjct: 285 VTDQDIKLAD--RIIDEGRAAIIVVNKWDAIDKDSYTIYEYKKKVMSRLYFMEWADLIFV 342
Query: 337 SAISGTGTGELLDLV 351
SA+SG ++ LV
Sbjct: 343 SAMSGKRVEKIFKLV 357
>gi|411118714|ref|ZP_11391094.1| ribosome-associated GTPase EngA [Oscillatoriales cyanobacterium
JSC-12]
gi|410710577|gb|EKQ68084.1| ribosome-associated GTPase EngA [Oscillatoriales cyanobacterium
JSC-12]
Length = 452
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 153/313 (48%), Positives = 200/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS + NRL G AIV DEPGVTRDR Y R++W + EF++VDTGG+
Sbjct: 3 LPVVAIIGRPNVGKSTIVNRLAGVQEAIVYDEPGVTRDRTYKRAYWRDREFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ V IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAMAALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG T D EIA+WLR+ + ++LAVNKCES +G++Q ++FW LG P P+S I G
Sbjct: 94 QAGPTGGDHEIAEWLRQQTVP--VLLAVNKCESVDQGVIQAADFWELGLGEPHPVSGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG+LLD + + L + +++ E + +AI GRPNVGKSS+LNA VGE+R IVSP
Sbjct: 152 SGTGDLLDELVNYLPPINQVDEIEEIK-----VAIAGRPNVGKSSLLNAFVGENRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAID GQ +R+IDTAGIRK+ + E +NRAF+AI R+DVV
Sbjct: 207 ISGTTRDAIDM-VVERNGQTYRIIDTAGIRKKKNVEYG---PEFFGINRAFKAIARADVV 262
Query: 462 ALVIEAMACITEQ 474
VI+A+ +TEQ
Sbjct: 263 LFVIDALDGVTEQ 275
>gi|22298421|ref|NP_681668.1| GTP-binding protein EngA [Thermosynechococcus elongatus BP-1]
gi|34222551|sp|Q8DKI1.1|DER_THEEB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|22294600|dbj|BAC08430.1| GTP-binding protein [Thermosynechococcus elongatus BP-1]
Length = 449
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 160/313 (51%), Positives = 199/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS NRL G AIV DEPGVTRDR Y +FW + EF++VDTGG++
Sbjct: 3 LPIVAVVGRPNVGKSTFVNRLAGERDAIVHDEPGVTRDRTYRPAFWQDREFLVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S + +PL I +QA A++E+ IF+VDG
Sbjct: 63 FDDDS----------------DFLPL-------------IRQQAELALQEATAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG TA D EIA WLR+ + +++AVNKCES + G +Q +EFWSLG P PIS+I G
Sbjct: 94 QAGPTALDYEIAAWLRQ--LSLPVLVAVNKCESRQMGQVQAAEFWSLGLGEPYPISSIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + + L E + E + +AI GRPNVGKSS+LNAL+G DR IVSP
Sbjct: 152 SGTGELLDQLITYLPAGETLPEAPEIQ-----VAIAGRPNVGKSSLLNALIGSDRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT G ++R IDTAGIRKR +A E SV+RAF+AI RSDVV
Sbjct: 207 ISGTTRDAIDTVIEH-GGTQYRFIDTAGIRKRTHVAYG---PEMFSVHRAFKAIHRSDVV 262
Query: 462 ALVIEAMACITEQ 474
LV++A+ ITEQ
Sbjct: 263 LLVLDALEEITEQ 275
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 31/160 (19%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
+PE +VAI GRPNVGKS+L N L+G +RAIV G TRD + G ++ +
Sbjct: 170 TLPEAPEIQVAIAGRPNVGKSSLLNALIGSDRAIVSPISGTTRDAIDTVIEHGGTQYRFI 229
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCV 275
DT G+ + VA P M +A AI S V
Sbjct: 230 DTAGI----------------------------RKRTHVAYGPEMFSVHRAFKAIHRSDV 261
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ ++D +T D+ +A + + +L VNK ++
Sbjct: 262 VLLVLDALEEITEQDQRLAGHIADQ--GRACVLIVNKWDA 299
>gi|194476538|ref|YP_002048717.1| GTP-binding protein EngA [Paulinella chromatophora]
gi|171191545|gb|ACB42507.1| GTP-binding protein EngA [Paulinella chromatophora]
Length = 456
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 160/313 (51%), Positives = 199/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
L VAI+GRPNVGKS L NRL AIV DE GVTRDR Y + FWGE +F +VDTGG++
Sbjct: 3 LSTVAIIGRPNVGKSTLANRLCQSREAIVHDELGVTRDRTYQKGFWGEKQFQVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +P I +QA A+ E+ V + +VDG
Sbjct: 63 FDDDS----------------EFLP-------------EIRKQAIIALSEATVAVVIVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
Q GLTAADE IA++LR + I+LAVNKCESP +G+ +EFWSLG +P PISAI G
Sbjct: 94 QQGLTAADETIAEFLRGHSCP--ILLAVNKCESPEQGLSMAAEFWSLGLGTPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + + L +GT +EEEN I +AIVGRPNVGKSS+LNA+ GE R IVS
Sbjct: 152 AGTGELLDKIVTYL---DGTT--IEEENDIVQLAIVGRPNVGKSSLLNAICGETRAIVSQ 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRD IDT + EG +RLIDTAGIR+R ++ E S+NR+F+AI RSDV
Sbjct: 207 IRGTTRDTIDT-YVEREGYHWRLIDTAGIRRRRSVDYG---PELFSINRSFKAIERSDVC 262
Query: 462 ALVIEAMACITEQ 474
L+I+A+ +TEQ
Sbjct: 263 LLIIDALDGVTEQ 275
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 40/192 (20%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E+ + ++AIVGRPNVGKS+L N + G RAIV G TRD + + + L+DT
Sbjct: 173 ENDIVQLAIVGRPNVGKSSLLNAICGETRAIVSQIRGTTRDTIDTYVEREGYHWRLIDTA 232
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIF 278
G+ R +V P + ++ AIE S V +
Sbjct: 233 GI----------------------------RRRRSVDYGPELFSINRSFKAIERSDVCLL 264
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLG 330
++D G+T D+ +A R + I+ +NK ++ K + S+ + L
Sbjct: 265 IIDALDGVTEQDQRLAG--RIEEEGRACIIIINKWDAIEKDSHTMSAMEKDLRSKLYFLN 322
Query: 331 FSP-LPISAISG 341
++P L ISA+ G
Sbjct: 323 WAPMLFISALKG 334
>gi|434392243|ref|YP_007127190.1| GTP-binding protein engA [Gloeocapsa sp. PCC 7428]
gi|428264084|gb|AFZ30030.1| GTP-binding protein engA [Gloeocapsa sp. PCC 7428]
Length = 452
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 156/313 (49%), Positives = 200/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y ++W + EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGAQDAIVYDEPGVTRDRTYSNAYWRDREFVVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA+ A+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQASLALAEAVAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T ADE IA+WLR+ + +++AVNKCESP +G+ Q ++FW LG P P+S I G
Sbjct: 94 QTGPTPADEAIAEWLRQQPVP--VLVAVNKCESPDQGLAQAAQFWELGLGEPYPVSGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + + + V + E + I +AIVGRPNVGKSS+LNA VG R IVSP
Sbjct: 152 SGTGELLDQLITFIPPVSE----LPETDEI-KVAIVGRPNVGKSSLLNAFVGTQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD+IDT EG+ +RLIDTAGIRK+ + E +NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDSIDT-VIEREGKVYRLIDTAGIRKKKNVEYG---PEFFGINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 263 LLVIDALDGVTEQ 275
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 38/67 (56%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+ +PE +VAIVGRPNVGKS+L N VG RAIV G TRD + +
Sbjct: 168 VSELPETDEIKVAIVGRPNVGKSSLLNAFVGTQRAIVSPISGTTRDSIDTVIEREGKVYR 227
Query: 215 LVDTGGV 221
L+DT G+
Sbjct: 228 LIDTAGI 234
>gi|443328905|ref|ZP_21057497.1| ribosome-associated GTPase EngA [Xenococcus sp. PCC 7305]
gi|442791450|gb|ELS00945.1| ribosome-associated GTPase EngA [Xenococcus sp. PCC 7305]
Length = 453
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 154/313 (49%), Positives = 196/313 (62%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL G +AIV D+PG+TRDR Y SFW + EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGDQQAIVYDKPGITRDRTYRPSFWQDREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I +QA AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IRQQAMAALTEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLTA D EIADWLR + ++LAVNKCES +G +Q +EFW LG P P+S I G
Sbjct: 94 QMGLTAGDREIADWLRAQSVP--VLLAVNKCESIEQGAIQAAEFWQLGLGEPYPVSGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + + L V+ ++ E + +AI+GRPNVGKSS+LNAL GE R IVS
Sbjct: 152 NGTGELLDELITHLPPVDELPEIEEIK-----VAIIGRPNVGKSSLLNALTGEKRAIVSS 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
+SGTTRDAIDT G +RLIDTAGIR++ + E S+NRAF+AIRR+DVV
Sbjct: 207 VSGTTRDAIDT-VVERNGTTYRLIDTAGIRRKKNVEYGA---EFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
V++ + +TEQ
Sbjct: 263 LFVLDVLDGVTEQ 275
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 38/206 (18%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+ +PE +VAI+GRPNVGKS+L N L G RAIV G TRD + +
Sbjct: 168 VDELPEIEEIKVAIIGRPNVGKSSLLNALTGEKRAIVSSVSGTTRDAIDTVVERNGTTYR 227
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ + + N+ G E + +A AI +
Sbjct: 228 LIDTAGI----RRKKNV--------EYGAEFFSI---------------NRAFKAIRRAD 260
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL 334
V++F++D G+T D ++A + + K I+ +NK ++ K + E+ S L
Sbjct: 261 VVLFVLDVLDGVTEQDLKLAGRIIEE--GKATIIILNKWDAVEKDSHTIYEYKQKVMSRL 318
Query: 335 PI---------SAISGTGTGELLDLV 351
SA++G ++LDLV
Sbjct: 319 YFMEWAELLFTSALTGKRVDKILDLV 344
>gi|218245012|ref|YP_002370383.1| GTP-binding protein EngA [Cyanothece sp. PCC 8801]
gi|257058036|ref|YP_003135924.1| GTP-binding protein EngA [Cyanothece sp. PCC 8802]
gi|226741133|sp|B7K1S0.1|DER_CYAP8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|218165490|gb|ACK64227.1| small GTP-binding protein [Cyanothece sp. PCC 8801]
gi|256588202|gb|ACU99088.1| small GTP-binding protein [Cyanothece sp. PCC 8802]
Length = 452
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 156/313 (49%), Positives = 198/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPG+TRDR Y FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLANRLAGDQHAIVHDEPGITRDRTYRPGFWQDRDFQIVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I Q+ AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQSLAALNEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
Q G T D EIADWLR+ + ++LAVNKCESP G++Q ++FW LG +P PIS I G
Sbjct: 94 QTGPTTGDLEIADWLRQQPVP--VLLAVNKCESPELGLIQATQFWELGLGNPYPISGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + + L E + + + I +AI+GRPNVGKSS+LNAL+GE+R IVSP
Sbjct: 152 NGTGELLDDLITYLPPPEE----ITQSDEI-KVAIIGRPNVGKSSLLNALLGENRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT E Q +RLIDTAGIR++ + E S+NRAF+AIRR DVV
Sbjct: 207 ISGTTRDAIDTVIQHNE-QTYRLIDTAGIRRKKNVEYGA---EFFSINRAFKAIRRCDVV 262
Query: 462 ALVIEAMACITEQ 474
VI+A+ +T+Q
Sbjct: 263 LFVIDAIDGVTDQ 275
>gi|170076756|ref|YP_001733394.1| GTP-binding protein EngA [Synechococcus sp. PCC 7002]
gi|238692797|sp|B1XLH8.1|DER_SYNP2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|169884425|gb|ACA98138.1| GTPase of unknown function [Synechococcus sp. PCC 7002]
Length = 453
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 158/313 (50%), Positives = 200/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +A++GRPNVGKS L NR+ G +AIV D+PG+TRDR Y FW + F +VDTGG+
Sbjct: 3 LPIIAVIGRPNVGKSTLVNRIAGDQQAIVHDQPGITRDRTYRPGFWQDRNFQIVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA A+ E+ V +F+VDG
Sbjct: 62 --------VFDDHE-------EFLPL-------------IREQAAIALAEAAVALFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
QAGL AAD+EIADWLR+ + ++LAVNKCES +G Q +EFW LG P PISAI G
Sbjct: 94 QAGLNAADQEIADWLRQQNVP--VVLAVNKCESLEQGYTQAAEFWELGMEEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG+LLD V L + VEE+ I +AI+GRPNVGKSS+LNAL GE R IVSP
Sbjct: 152 SGTGDLLDKVIEYLPTITD----VEEDTTI-NVAIIGRPNVGKSSLLNALTGEQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT GQ++RLIDTAGIR++ + E S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDT-IIERNGQQYRLIDTAGIRRKKNVDYGA---EFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
VI+ + +TEQ
Sbjct: 263 LFVIDVLDGVTEQ 275
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 44/210 (20%)
Query: 154 TIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
TI +V E VAI+GRPNVGKS+L N L G RAIV G TRD + ++
Sbjct: 167 TITDVEEDTTINVAIIGRPNVGKSSLLNALTGEQRAIVSPISGTTRDAIDTIIERNGQQY 226
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
L+DT G+ + + N+ G E + +A AI +
Sbjct: 227 RLIDTAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRA 259
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF------- 326
V++F++D G+T D ++A R + +I+ NK ++ K ++++
Sbjct: 260 DVVLFVIDVLDGVTEQDLKLAG--RIIDEGRAVIIVANKWDAVEKDTYTINQYRKELQAR 317
Query: 327 -----WSLGFSPLPISAISGTGTGELLDLV 351
W+ L ISA +G ++LDLV
Sbjct: 318 LFFMEWA---EMLFISAQTGQRVNKILDLV 344
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTG-PEGQKFRLIDTA 428
++P IA++GRPNVGKS+++N + G+ + IV G TRD T G + + F+++DT
Sbjct: 2 KLPIIAVIGRPNVGKSTLVNRIAGDQQAIVHDQPGITRDR--TYRPGFWQDRNFQIVDTG 59
Query: 429 GI 430
GI
Sbjct: 60 GI 61
>gi|113474219|ref|YP_720280.1| GTP-binding protein EngA [Trichodesmium erythraeum IMS101]
gi|123161345|sp|Q119L7.1|DER_TRIEI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|110165267|gb|ABG49807.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
Length = 453
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 157/313 (50%), Positives = 196/313 (62%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS + NRL AIV DEPG+TRDR Y ++W + EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTIVNRLAESKDAIVHDEPGITRDRTYRNAYWEDREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ V IF+VDG
Sbjct: 62 --------VFDD-------NTEFLPL-------------IREQAMAALVEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLT DEEIA WLR+ + I+LAVNKCES +G+ Q + FW LG P PIS I G
Sbjct: 94 QTGLTGGDEEIAQWLRQQTIP--ILLAVNKCESITEGLTQAAMFWELGLGEPYPISGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + + L T+ + E N+ IAIVGRPNVGKSS+LN+ +GE R IVSP
Sbjct: 152 NGTGELLDDLITYLP----TQGEITETNQ-TKIAIVGRPNVGKSSLLNSFIGEKRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT G+ +RLIDTAGIRK+ + E +NRAF+AIRR++VV
Sbjct: 207 ISGTTRDAIDT-VVERNGKTYRLIDTAGIRKKKNVEYGA---EFFGINRAFKAIRRAEVV 262
Query: 462 ALVIEAMACITEQ 474
VI+A+ +TEQ
Sbjct: 263 MFVIDALDGVTEQ 275
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 29/165 (17%)
Query: 154 TIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
T G + E ++AIVGRPNVGKS+L N +G RAIV G TRD + +
Sbjct: 167 TQGEITETNQTKIAIVGRPNVGKSSLLNSFIGEKRAIVSPISGTTRDAIDTVVERNGKTY 226
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
L+DT G+ + + N+ G E + +A AI +
Sbjct: 227 RLIDTAGI----RKKKNV--------EYGAEFFGI---------------NRAFKAIRRA 259
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
V++F++D G+T D+++A+ + ++ + ++ VNK ++ K
Sbjct: 260 EVVMFVIDALDGVTEQDQKLANRIIED--GRACVIVVNKWDAIEK 302
>gi|428201101|ref|YP_007079690.1| ribosome-associated GTPase EngA [Pleurocapsa sp. PCC 7327]
gi|427978533|gb|AFY76133.1| ribosome-associated GTPase EngA [Pleurocapsa sp. PCC 7327]
Length = 452
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/315 (50%), Positives = 199/315 (63%), Gaps = 45/315 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G +AIV DEPG+TRDR Y +FW + EF +VDTGG++
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGDQQAIVHDEPGITRDRTYRPAFWRDREFQVVDTGGIV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
ED E +PL I QA A+ E+ IF+VDG
Sbjct: 63 --------FDED--------TEFLPL-------------IREQAMLALAEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q+G T D EIADWLR+ + ++LAVNKCES +G++Q +EFW LG P PISAI G
Sbjct: 94 QSGPTTGDREIADWLRQQSVP--VLLAVNKCESVEQGLVQAAEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAI--AIVGRPNVGKSSILNALVGEDRTIV 399
GTGELLD + + L T +L E +P I AI+GRPNVGKSS+LNAL GE R IV
Sbjct: 152 NGTGELLDDLIAYLPP---TSELPE----VPEIKVAIIGRPNVGKSSLLNALTGEKRAIV 204
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SPISGTTRDAIDT +G+ +RLIDTAGIR++ + E +NRAF+AIRRSD
Sbjct: 205 SPISGTTRDAIDTVIE-RKGKNYRLIDTAGIRRKKNVDYGA---EFFGINRAFKAIRRSD 260
Query: 460 VVALVIEAMACITEQ 474
VV VI+ + +T+Q
Sbjct: 261 VVLFVIDVLDGVTDQ 275
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 38/203 (18%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 LPEVPEIKVAIIGRPNVGKSSLLNALTGEKRAIVSPISGTTRDAIDTVIERKGKNYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFGI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL-------- 329
F++D G+T D ++A + + K ++ VNK ++ K + ++ L
Sbjct: 264 FVIDVLDGVTDQDLKLAGRIIDD--GKAAVIVVNKWDAVEKDSYTIYDYQKLIQDRLYFM 321
Query: 330 -GFSPLPISAISGTGTGELLDLV 351
+ +SA++G ++LDL+
Sbjct: 322 DWAEKIFVSAMTGQRVNKILDLI 344
>gi|428307266|ref|YP_007144091.1| GTP-binding protein engA [Crinalium epipsammum PCC 9333]
gi|428248801|gb|AFZ14581.1| GTP-binding protein engA [Crinalium epipsammum PCC 9333]
Length = 455
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 159/313 (50%), Positives = 207/313 (66%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS + NRL G N AIV DE GVTRDR Y +FW + ++++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTVANRLAGDNDAIVHDEAGVTRDRTYRPAFWQDRDYIVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQALAALAEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAGLT D+EIA+WLR++ + ++LAVNKCESP++G++Q SEFWSLG P P+S I G
Sbjct: 94 QAGLTTGDQEIAEWLRQHPIP--VVLAVNKCESPQQGLVQASEFWSLGLGEPFPMSGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELL+ + + L V D +EE I +AIVGRPNVGKSS+LNAL GE+R+IVSP
Sbjct: 152 NGTGELLEKLVTYLPSV----DEIEETPEI-KVAIVGRPNVGKSSLLNALTGENRSIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAID+ G +RLIDTAGIR++ + +E +NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDS-VVERNGTTYRLIDTAGIRRKKNVEYG---SEFFGINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LVI+ + +T+Q
Sbjct: 263 LLVIDVLDGVTDQ 275
>gi|126658269|ref|ZP_01729419.1| GTP-binding protein EngA [Cyanothece sp. CCY0110]
gi|126620418|gb|EAZ91137.1| GTP-binding protein EngA [Cyanothece sp. CCY0110]
Length = 452
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/313 (49%), Positives = 199/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL +AIV D+PG+TRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAKDRQAIVHDQPGITRDRTYRPAFWRDRDFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAMAALTEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G TA D EI+DWLR+ + ++LAVNKCESP +G+MQ +EFW LG P PIS I G
Sbjct: 94 QLGPTAGDREISDWLRRQQVP--VLLAVNKCESPEQGLMQAAEFWELGLGEPYPISGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + + L + D EE N ++I+GRPNVGKSS+LNA +GE R IVSP
Sbjct: 152 SGTGELLDELITYLPSPDELPDR-EEIN----VSIIGRPNVGKSSLLNAFLGEQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD IDT E +RLIDTAGIR++ + E S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDTIDTVVERGE-NTYRLIDTAGIRRKKNVNYGA---EFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 263 LLVIDAIDGVTDQ 275
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 41/204 (20%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+I+GRPNVGKS+L N +G RAIV G TRD + GE+ + L+DT G+
Sbjct: 179 VSIIGRPNVGKSSLLNAFLGEQRAIVSPISGTTRDTIDTVVERGENTYRLIDTAGI---- 234
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + N+ G E + +A AI + V++ ++D G
Sbjct: 235 RRKKNV--------NYGAEFFSI---------------NRAFKAIRRADVVLLVIDAIDG 271
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP---------I 336
+T D ++AD R + I+ VNK ++ K + E+ L +
Sbjct: 272 VTDQDIKLAD--RIIDEGRAAIIVVNKWDAVEKDSYTIYEYKQRVMDRLYFMEWADIIFV 329
Query: 337 SAISGT---GTGELLDLVCSELKK 357
SA+SG EL+DL E ++
Sbjct: 330 SAMSGKRVENIFELVDLAVEEHRR 353
>gi|427419525|ref|ZP_18909708.1| ribosome-associated GTPase EngA [Leptolyngbya sp. PCC 7375]
gi|425762238|gb|EKV03091.1| ribosome-associated GTPase EngA [Leptolyngbya sp. PCC 7375]
Length = 453
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 157/315 (49%), Positives = 196/315 (62%), Gaps = 45/315 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV D+PGVTRDR Y +FW + +FM+VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLAGAREAIVYDQPGVTRDRTYQPAFWQDRDFMVVDTGGLV 62
Query: 223 NVSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
S+ P+I E QA A+ ES +F+V
Sbjct: 63 FADDSEFLPHIRE-------------------------------QAMLALAESKAAVFVV 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ GL +D EIA WLR+ + ++LAVNKCES +GI+Q +EFW+LG P +S I
Sbjct: 92 DGQEGLNESDREIASWLRQQSVP--VLLAVNKCESEDQGIIQATEFWALGLGEPYAVSGI 149
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTGELLD + + L D +EE++ I +AIVGRPNVGKSS+LNA VGE+R IV
Sbjct: 150 HGNGTGELLDELVTHLPPT----DEIEEDDEIK-VAIVGRPNVGKSSLLNAFVGENRAIV 204
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S ISGTTRD ID E +RLIDTAGIRK+ + E S+NRAF+AIRRSD
Sbjct: 205 SNISGTTRDTIDMVVRRKEA-VYRLIDTAGIRKKKNVNYG---PEFFSINRAFKAIRRSD 260
Query: 460 VVALVIEAMACITEQ 474
VV LVI+A+ +TEQ
Sbjct: 261 VVLLVIDALDGMTEQ 275
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 54/225 (24%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAIVGRPNVGKS+L N VG NRAIV + G TRD + E + L+DT G+
Sbjct: 178 KVAIVGRPNVGKSSLLNAFVGENRAIVSNISGTTRDTIDMVVRRKEAVYRLIDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ G E + +A AI S V++ ++D
Sbjct: 235 -RKKKNV--------NYGPEFFSI---------------NRAFKAIRRSDVVLLVIDALD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF------------WSLGFS 332
G+T D+++A R + I+ VNK ++ K + E+ W+ +
Sbjct: 271 GMTEQDQKLAG--RIEDEGRACIIVVNKWDAIEKDSHTIYEYDKKLGGKIYFLDWA---T 325
Query: 333 PLPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIV 377
L +SA++G ++LD V ++ VE+ R + A+V
Sbjct: 326 RLYVSALTGQRVPKILDAV----------DEAVEQHRRRVSTAVV 360
>gi|284929084|ref|YP_003421606.1| ribosome-associated GTPase EngA [cyanobacterium UCYN-A]
gi|284809543|gb|ADB95248.1| ribosome-associated GTPase EngA [cyanobacterium UCYN-A]
Length = 452
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 151/313 (48%), Positives = 196/313 (62%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA++GRPNVGKS L NRL +AIV DEPG+TRDR+Y ++FW H+F++VDTGG+
Sbjct: 3 LPIVAVIGRPNVGKSTLVNRLAKNRQAIVHDEPGITRDRVYRQAFWRTHDFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I QA A+ E+ V +F+VDG
Sbjct: 62 --------VFND-------NTEFLPL-------------IREQAMTALSEASVAVFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T D EI +WLR+ + ++LAVNKCESP G++Q ++FW LG P PIS I G
Sbjct: 94 QLGPTTGDYEIGNWLRQQKVP--VLLAVNKCESPEHGLIQAAQFWELGLGEPYPISGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGE LD + L D EE N ++IVGRPNVGKSS+LNA +GE R IVSP
Sbjct: 152 NGTGEFLDKLILHLPSSNKMFD-PEEIN----VSIVGRPNVGKSSLLNAFLGEKRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRD IDT +G+ +RL+DTAGIR++ + E S+NRAF+AIRR+DVV
Sbjct: 207 IAGTTRDVIDT-IVERKGKVYRLVDTAGIRRKKNVEYGA---EFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 263 LLVIDAIDGVTEQ 275
>gi|217074544|gb|ACJ85632.1| unknown [Medicago truncatula]
Length = 319
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 133/154 (86%), Positives = 144/154 (93%)
Query: 321 MQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRP 380
MQVSEFWSLG P+PISAISGTGTG+LLDLVCS L+KVE ++LVEEE+ +PAI+IVGRP
Sbjct: 1 MQVSEFWSLGLEPIPISAISGTGTGDLLDLVCSGLQKVEEPQNLVEEEDYVPAISIVGRP 60
Query: 381 NVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSG 440
NVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGP+GQKF LIDTAGIRKR +AS+G
Sbjct: 61 NVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPDGQKFHLIDTAGIRKRTTVASAG 120
Query: 441 STTEALSVNRAFRAIRRSDVVALVIEAMACITEQ 474
STTEALSVNRAFRAIRRSDV ALVIEAMACITEQ
Sbjct: 121 STTEALSVNRAFRAIRRSDVGALVIEAMACITEQ 154
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 29/158 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVD 217
E +P ++IVGRPNVGKS++ N LVG +R IV G TRD + F G +F L+D
Sbjct: 48 EDYVPAISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI-DTEFTGPDGQKFHLID 106
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ TT+ G +T EA + +A AI S V
Sbjct: 107 TAGIRK--------------RTTVASAG---STTEA-------LSVNRAFRAIRRSDVGA 142
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+++ A +T D +IA+ + K K ++ VNK ++
Sbjct: 143 LVIEAMACITEQDYKIAERIEKE--GKGCVIVVNKWDT 178
>gi|16330798|ref|NP_441526.1| GTP-binding protein EngA [Synechocystis sp. PCC 6803]
gi|383322540|ref|YP_005383393.1| hypothetical protein SYNGTI_1631 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325709|ref|YP_005386562.1| hypothetical protein SYNPCCP_1630 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491593|ref|YP_005409269.1| hypothetical protein SYNPCCN_1630 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436860|ref|YP_005651584.1| hypothetical protein SYNGTS_1631 [Synechocystis sp. PCC 6803]
gi|451814956|ref|YP_007451408.1| hypothetical protein MYO_116460 [Synechocystis sp. PCC 6803]
gi|8928101|sp|P74120.1|DER_SYNY3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|1653291|dbj|BAA18206.1| slr1974 [Synechocystis sp. PCC 6803]
gi|339273892|dbj|BAK50379.1| slr1974 [Synechocystis sp. PCC 6803]
gi|359271859|dbj|BAL29378.1| slr1974 [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359275029|dbj|BAL32547.1| slr1974 [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359278199|dbj|BAL35716.1| slr1974 [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407961844|dbj|BAM55084.1| GTP-binding protein EngA [Bacillus subtilis BEST7613]
gi|451780925|gb|AGF51894.1| hypothetical protein MYO_116460 [Synechocystis sp. PCC 6803]
Length = 452
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 155/313 (49%), Positives = 197/313 (62%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGNQQAIVHDQPGITRDRTYRPAFWRDRDFQVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +P I QA A+ E+ IF+VDG
Sbjct: 63 FNDDS----------------EFLP-------------EIREQANLALAEAKAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G TA+DEEIA WLR+ + +ILAVNKCESP +G +Q +EFW LG P P+SAI G
Sbjct: 94 QQGPTASDEEIAQWLRQQSVP--VILAVNKCESPDQGAIQAAEFWHLGLGEPYPMSAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG+LLD + L + E+ E+E + +AIVGRPNVGKSS+LNAL GE R IVSP
Sbjct: 152 SGTGDLLDALLEYLPAPQ--EEPEEDEIK---VAIVGRPNVGKSSLLNALTGEQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAID GQK+RLIDTAGIR++ + E +NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDM-VVERNGQKYRLIDTAGIRRKKNVDYGA---EFFGINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
V++ + +TEQ
Sbjct: 263 LFVLDVLDGVTEQ 275
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 29/167 (17%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE +VAIVGRPNVGKS+L N L G RAIV G TRD + ++ L+DT
Sbjct: 172 PEEDEIKVAIVGRPNVGKSSLLNALTGEQRAIVSPISGTTRDAIDMVVERNGQKYRLIDT 231
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + N+ G E + +A AI + V++F
Sbjct: 232 AGI----RRKKNV--------DYGAEFFGI---------------NRAFKAIRRADVVLF 264
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE 325
++D G+T D ++A + ++ + ++L +NK ++ K + E
Sbjct: 265 VLDVLDGVTEQDLKLAGRIIED--GRAVVLVINKWDAVEKDSYTIYE 309
>gi|119494580|ref|ZP_01624713.1| GTP-binding protein EngA [Lyngbya sp. PCC 8106]
gi|119452086|gb|EAW33297.1| GTP-binding protein EngA [Lyngbya sp. PCC 8106]
Length = 453
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 155/313 (49%), Positives = 199/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NRL +IV D+PG+TRDR Y ++W + EF +VDTGG+
Sbjct: 3 LPIVAIVGRPNVGKSTLVNRLSETQDSIVHDQPGITRDRTYRYAYWQDREFSVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I +D E +PL I Q A+ E+ V IF+VDG
Sbjct: 62 --------IFDD-------DTEFLPL-------------IREQVMVALAEATVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
Q GLT DE IA WLR++ + ++LAVNKCESP G++Q +FW LG +P P+S+I G
Sbjct: 94 QTGLTGGDEAIASWLREHSVP--VLLAVNKCESPTTGLIQSMQFWELGLGNPFPLSSIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD EL K D +EE I +AIVGRPNVGKSS+LNA +GE+R IVSP
Sbjct: 152 SGTGELLD----ELIKYIPKADELEESEEI-RVAIVGRPNVGKSSLLNAFLGENRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT G+ +RL+DTAGIR++ + E +NRAF+AIRRS++V
Sbjct: 207 ISGTTRDAIDT-VVERNGKTYRLVDTAGIRRKKNVEYGA---EFFGINRAFKAIRRSNIV 262
Query: 462 ALVIEAMACITEQ 474
L+I+A+ +TEQ
Sbjct: 263 LLIIDAIDRVTEQ 275
>gi|427713062|ref|YP_007061686.1| ribosome-associated GTPase EngA [Synechococcus sp. PCC 6312]
gi|427377191|gb|AFY61143.1| ribosome-associated GTPase EngA [Synechococcus sp. PCC 6312]
Length = 445
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 156/313 (49%), Positives = 200/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NRL G +IV D+PGVTRDR Y +FW + EF++VDTGG++
Sbjct: 3 LPIVAIVGRPNVGKSTLVNRLTGEMASIVHDQPGVTRDRTYRPAFWQDREFVVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I +QA A+ E+ V IF+VDG
Sbjct: 63 FGDDS----------------EFLPL-------------IRQQAIVALNEAKVAIFMVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G TA D EIA WLR+ + ++LAVNKCESP++G+ Q +EFW LG P PIS+I G
Sbjct: 94 QIGPTALDLEIAAWLRQQPVP--VLLAVNKCESPQQGLAQAAEFWQLGLGEPYPISSIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + + + ++ EE R +AI GRPNVGKSS+LNA +G +R IVSP
Sbjct: 152 SGTGELLDQLLDYIPPTD--PEITAEEIR---VAIAGRPNVGKSSLLNAFLGAERAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT +GQ +RLIDTAGIR+R ++ E V+RAF+AI R+DVV
Sbjct: 207 ISGTTRDAIDT-VVERDGQTYRLIDTAGIRRRKSVDYG---PEMFGVHRAFQAIHRADVV 262
Query: 462 ALVIEAMACITEQ 474
+++A+ ITEQ
Sbjct: 263 LFILDALEDITEQ 275
>gi|254417083|ref|ZP_05030829.1| GTPase, putative [Coleofasciculus chthonoplastes PCC 7420]
gi|196176061|gb|EDX71079.1| GTPase, putative [Coleofasciculus chthonoplastes PCC 7420]
Length = 461
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/321 (48%), Positives = 198/321 (61%), Gaps = 47/321 (14%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VA++GRPNVGKS L NRL G AIV D+PGVTRDR Y +FW + ++ +VDTGG+
Sbjct: 2 VLPVVAVIGRPNVGKSTLVNRLAGVMDAIVHDQPGVTRDRTYRPAFWQDRDYSIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D E +PL I QA AA+ E+ I +VD
Sbjct: 62 ---------VFDD-------DTEFLPL-------------IREQAMAALSEASAAILVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G TAAD IADWLR++ + ++LAVNKCESP++G++Q +EFW LG P P+SAI
Sbjct: 93 GQMGPTAADYAIADWLRQHPVP--VVLAVNKCESPQQGLIQAAEFWELGLGEPFPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTGELLD + + L V D E +AIVGRPNVGKSS+LNAL GE R IVS
Sbjct: 151 GAGTGELLDQLITHLPTVGMLPDTSEIN-----VAIVGRPNVGKSSLLNALTGEKRAIVS 205
Query: 401 PISGTTRDAIDTEFTGP-------EGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFR 453
+SGTTRDAID P E Q +RLIDTAGIR++ + E +NRAF+
Sbjct: 206 SVSGTTRDAIDMIVERPGNPETETESQLYRLIDTAGIRRKKNVEYG---PEFFGINRAFK 262
Query: 454 AIRRSDVVALVIEAMACITEQ 474
AIRR+DVV V++A+ +TEQ
Sbjct: 263 AIRRADVVLFVVDALDGVTEQ 283
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 32/208 (15%)
Query: 154 TIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
T+G +P+ VAIVGRPNVGKS+L N L G RAIV G TRD +
Sbjct: 167 TVGMLPDTSEINVAIVGRPNVGKSSLLNALTGEKRAIVSSVSGTTRDAID---------- 216
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEE 272
M+V+ G P + + I GI R+ V P +A AI
Sbjct: 217 MIVERPG-------NPETETESQLYRLIDTAGI---RRKKNVEYGPEFFGINRAFKAIRR 266
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF------ 326
+ V++F+VD G+T D+++A + ++ + ++ VNK ++ K + E+
Sbjct: 267 ADVVLFVVDALDGVTEQDQKLAGRIAED--GRAAVILVNKWDAIEKDTYTIYEYEKLLKN 324
Query: 327 --WSLGFSPLP-ISAISGTGTGELLDLV 351
+ + ++P+ +SA++G ++LDLV
Sbjct: 325 RLYFVEWAPMIFVSALTGKRVDKILDLV 352
>gi|172035176|ref|YP_001801677.1| GTP-binding protein EngA [Cyanothece sp. ATCC 51142]
gi|354555681|ref|ZP_08974981.1| ribosome-associated GTPase EngA [Cyanothece sp. ATCC 51472]
gi|226706247|sp|B1X0B0.1|DER_CYAA5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|171696630|gb|ACB49611.1| GTP-binding protein [Cyanothece sp. ATCC 51142]
gi|353552331|gb|EHC21727.1| ribosome-associated GTPase EngA [Cyanothece sp. ATCC 51472]
Length = 452
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/313 (49%), Positives = 199/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL +AIV D+PG+TRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAKDRQAIVHDQPGITRDRTYRPAFWCDRDFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAMAALTEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G TA D EI+DWLR+ + ++LAVNKCESP G++Q +EFW LG P PIS I G
Sbjct: 94 QLGPTAGDREISDWLRRQKVP--VLLAVNKCESPEMGLIQAAEFWELGLGEPYPISGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + + L + D EE N ++I+GRPNVGKSS+LNA +GE R IVSP
Sbjct: 152 SGTGELLDQLITYLPSPDELPDR-EEIN----VSIIGRPNVGKSSLLNAFLGEQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT + +RLIDTAGIR++ + E S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDTVVERGD-NTYRLIDTAGIRRKKNVNYGA---EFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 263 LLVIDAIDGVTDQ 275
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 29/161 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+I+GRPNVGKS+L N +G RAIV G TRD + G++ + L+DT G+
Sbjct: 179 VSIIGRPNVGKSSLLNAFLGEQRAIVSPISGTTRDAIDTVVERGDNTYRLIDTAGI---- 234
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + N+ G E + +A AI + V++ ++D G
Sbjct: 235 RRKKNV--------NYGAEFFSI---------------NRAFKAIRRADVVLLVIDAIDG 271
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+T D ++AD R + I+ VNK ++ K + ++
Sbjct: 272 VTDQDIKLAD--RIIDEGRAAIIVVNKWDAVEKDSYTIYDY 310
>gi|443315655|ref|ZP_21045135.1| ribosome-associated GTPase EngA [Leptolyngbya sp. PCC 6406]
gi|442784749|gb|ELR94609.1| ribosome-associated GTPase EngA [Leptolyngbya sp. PCC 6406]
Length = 453
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/313 (49%), Positives = 195/313 (62%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA++GRPNVGKS L NRL G AIV D+PGVTRDR Y +FW + EFM+VDTGG+
Sbjct: 3 LPVVAVIGRPNVGKSTLVNRLAGARDAIVHDQPGVTRDRTYQPAFWRDREFMVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I +D E +P I QA A+ E+ I +V+G
Sbjct: 62 --------IFDD-------DTEFLP-------------HIREQALIALAEASAAILVVNG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T AD EIA WLR++ + +LAVNKCESP +G++Q ++FW LG P P+S I G
Sbjct: 94 QDGPTEADREIAQWLRQHTVPA--VLAVNKCESPDQGLIQAAQFWELGLGEPHPVSGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + L V ++L E + +AIVGRPNVGKSS+LNA VGE R IVSP
Sbjct: 152 NGTGELLDQLVEYLVPVNPEDELDEVK-----VAIVGRPNVGKSSLLNAFVGESRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAID + Q +RL+DTAGIRK+ + E +NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDM-VVKRKDQHYRLVDTAGIRKKKNVNYG---PEFFGINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LVI+A+ ITEQ
Sbjct: 263 LLVIDAVDGITEQ 275
>gi|443322324|ref|ZP_21051349.1| ribosome-associated GTPase EngA [Gloeocapsa sp. PCC 73106]
gi|442787929|gb|ELR97637.1| ribosome-associated GTPase EngA [Gloeocapsa sp. PCC 73106]
Length = 453
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/313 (49%), Positives = 192/313 (61%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL +AIV DEPG+TRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAKDKQAIVHDEPGITRDRTYQPAFWQDRDFTIVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E IP I Q A+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTELIP-------------QIREQTMLALNEATAAIFIVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+T D EIA WLR+ + ++L VNKCES G++Q +EFW LG PLP SAI G
Sbjct: 94 QVGVTTGDMEIASWLRQQSVP--VLLGVNKCESVATGLVQATEFWELGLGEPLPFSAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLDL+ L E++ E + +AIVGRPNVGKSS+ N L GE+R IVSP
Sbjct: 152 NGTGELLDLLIEYLPPTTEIEEIPEIK-----VAIVGRPNVGKSSLFNNLTGENRCIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT +GQ +RLIDTAGIRK+ + E +NR+FRAI RSDVV
Sbjct: 207 ISGTTRDAIDTVIEH-DGQVYRLIDTAGIRKKKNVEYG---VEFFGINRSFRAIHRSDVV 262
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 263 LLVIDALDEVTDQ 275
>gi|428224397|ref|YP_007108494.1| ribosome-associated GTPase EngA [Geitlerinema sp. PCC 7407]
gi|427984298|gb|AFY65442.1| ribosome-associated GTPase EngA [Geitlerinema sp. PCC 7407]
Length = 453
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 154/314 (49%), Positives = 193/314 (61%), Gaps = 43/314 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR G +IV DEPGVTRDR Y R+FW + EFM+VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRFAGVTDSIVHDEPGVTRDRTYRRAFWQDREFMVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +P I QA AA+ E+ IF+ DG
Sbjct: 62 --------VFDD-------DTEFLP-------------YIREQAMAALSEARAAIFVADG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T AD IA WLR++ + F LA+NKCESP +G+ Q ++FW LG P P+S I G
Sbjct: 94 QMGPTEADHAIATWLRQHPLPVF--LAINKCESPEQGVTQAAQFWELGLGEPYPVSGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG+LLD + L + E+ E +AIVGRPNVGKSS+LNA VGE+R IVSP
Sbjct: 152 NGTGDLLDALIQHLPPISEIEETPETR-----VAIVGRPNVGKSSLLNAFVGENRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQK-FRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
+SGTTRDAID G K +RLIDTAGIRK+ + E +NR+F+AIRR+DV
Sbjct: 207 VSGTTRDAIDMLVE--RGDKTYRLIDTAGIRKKKNVDYG---PEFFGINRSFKAIRRADV 261
Query: 461 VALVIEAMACITEQ 474
V LVI+A+ +TEQ
Sbjct: 262 VLLVIDAVDGVTEQ 275
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVAIVGRPNVGKS+L N VG NRAIV G TRD + G+ + L+DT G+
Sbjct: 178 RVAIVGRPNVGKSSLLNAFVGENRAIVSPVSGTTRDAIDMLVERGDKTYRLIDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ G E + ++ AI + V++ ++D
Sbjct: 235 -RKKKNV--------DYGPEFFGI---------------NRSFKAIRRADVVLLVIDAVD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF--------WSLGFSPLPI 336
G+T D+++A R + ++ VNK ++ K + +F + + ++ +
Sbjct: 271 GVTEQDQKLAG--RIADEGRACVVVVNKWDAVEKDSYTIYDFERMVRDRLYFVNWADMIF 328
Query: 337 -SAISGTGTGELLDLV 351
SA++G ++ DLV
Sbjct: 329 TSALTGQRVPKIFDLV 344
>gi|428773030|ref|YP_007164818.1| ribosome-associated GTPase EngA [Cyanobacterium stanieri PCC 7202]
gi|428687309|gb|AFZ47169.1| ribosome-associated GTPase EngA [Cyanobacterium stanieri PCC 7202]
Length = 452
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 153/314 (48%), Positives = 195/314 (62%), Gaps = 41/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VA++GRPNVGKSAL NRL G AIV DEPG+TRDR Y +FW + EF +VDTGG+
Sbjct: 1 MLPIVAVIGRPNVGKSALVNRLSGEQDAIVFDEPGITRDRTYRPAFWQDREFQIVDTGGL 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D E +P I QA AA+ E+ IF+VD
Sbjct: 61 ---------VFDD-------DTEFLP-------------YIREQAQAALSEAIAAIFVVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GLTA DEEIA WLR + +L VNKCES +G+ Q +EFW+LG P PISAI
Sbjct: 92 GKLGLTAGDEEIASWLRTQNVPT--VLVVNKCESENQGLAQAAEFWNLGLGEPFPISAIH 149
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTGE+L+ + + V+ E EEE R +AI+GRPNVGKSS+LNAL GE R IVS
Sbjct: 150 GNGTGEMLEELIKHIPPVDEIEQ--EEEIR---VAIIGRPNVGKSSLLNALTGESRAIVS 204
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P+SGTTRDAID E +RLIDTAG+R++ + E +NRAF+AI+R+DV
Sbjct: 205 PVSGTTRDAIDMVVRRGE-TTYRLIDTAGVRRKKNVDYG---AEFFGINRAFKAIKRADV 260
Query: 461 VALVIEAMACITEQ 474
V VI+ + +TEQ
Sbjct: 261 VLFVIDILDGVTEQ 274
>gi|434389307|ref|YP_007099918.1| ribosome-associated GTPase EngA [Chamaesiphon minutus PCC 6605]
gi|428020297|gb|AFY96391.1| ribosome-associated GTPase EngA [Chamaesiphon minutus PCC 6605]
Length = 452
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 156/313 (49%), Positives = 196/313 (62%), Gaps = 42/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G +IV DEPGVTRDR Y R+FW + EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGARESIVHDEPGVTRDRTYRRAFWQDREFVVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA A+ ++ IF+VDG
Sbjct: 62 --------VFDD-------ETEFLPL-------------IREQAMTALSQASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+T D+EIA WLR + F+ AVNKCES G MQ ++FW LG P IS+I G
Sbjct: 94 QQGITGGDQEIASWLRVQKIPVFV--AVNKCESETVGAMQTADFWELGIGEPYAISSIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + L + E++ E E R IAI+GRPNVGKSS+LNA +GE+R+IVSP
Sbjct: 152 SGTGELLDELILHLPIM---EEVDEPEVR---IAIIGRPNVGKSSLLNAFLGENRSIVSP 205
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT T G +RLIDTAGIR++ + E +NRAF+AI R DVV
Sbjct: 206 ISGTTRDAIDTVIT-RNGANYRLIDTAGIRRKKNVDYG---PEFFGINRAFKAIDRCDVV 261
Query: 462 ALVIEAMACITEQ 474
LV+ A+ +TEQ
Sbjct: 262 LLVLNAVDGVTEQ 274
>gi|423064932|ref|ZP_17053722.1| small GTP-binding protein [Arthrospira platensis C1]
gi|406714175|gb|EKD09343.1| small GTP-binding protein [Arthrospira platensis C1]
Length = 453
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 193/312 (61%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PG+TRDR Y ++W + EF +VDTGG+
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLTQTQDAIVHDQPGMTRDRTYRSAYWQDREFTVVDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ +D E +PL I QA A+ E+ IF+VDGQ
Sbjct: 62 -------VFDD-------DTEFLPL-------------IREQALIALGEATAAIFVVDGQ 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
G T DE IA WLR+ + I+LAVNKCESP +G+ Q ++FW LG +P PIS+I G+
Sbjct: 95 TGPTGGDEAIASWLRQQKVP--ILLAVNKCESPTQGLTQAAQFWELGLGNPFPISSIHGS 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTGELLD + L ED EE R +AIVGRPNVGKSS+LN +G++R IVSPI
Sbjct: 153 GTGELLDALIENLPASTDNED--SEELR---VAIVGRPNVGKSSLLNTFLGQERAIVSPI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
SGTTRDAIDT G +RL+DTAGIR++ + E +NRAF+AIRR+DVV
Sbjct: 208 SGTTRDAIDT-IVEHNGNTYRLVDTAGIRRKKHVEYGA---EFFGINRAFKAIRRADVVL 263
Query: 463 LVIEAMACITEQ 474
VI+A+ +T+Q
Sbjct: 264 FVIDAVEGVTDQ 275
>gi|409992857|ref|ZP_11276024.1| GTP-binding protein Der [Arthrospira platensis str. Paraca]
gi|291569696|dbj|BAI91968.1| GTP-binding protein [Arthrospira platensis NIES-39]
gi|409936275|gb|EKN77772.1| GTP-binding protein Der [Arthrospira platensis str. Paraca]
Length = 453
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 193/312 (61%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PG+TRDR Y ++W + EF++VDTGG+
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLTQTQDAIVHDQPGMTRDRTYRSAYWQDREFIVVDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ +D E +PL I QA A+ E+ I +VDGQ
Sbjct: 62 -------VFDD-------DTEFVPL-------------IREQALMALAEATAAILVVDGQ 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
G T DE IA WLR+ + I+LAVNKCESP +G+ Q ++FW LG +P PIS+I G
Sbjct: 95 TGPTGGDEAIASWLRQQKVP--ILLAVNKCESPTQGLTQAAQFWELGLGTPFPISSIHGN 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTGELLD + L TED EE R +AIVGRPNVGKSS+LN +G++R IVSPI
Sbjct: 153 GTGELLDTLIEHLPS--STEDDDNEELR---VAIVGRPNVGKSSLLNTFLGQERAIVSPI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
SGTTRDAIDT G +RL+DTAGIR++ + E +NRAF+AIRR+DVV
Sbjct: 208 SGTTRDAIDT-IVEHNGNTYRLVDTAGIRRKKHVEYGA---EFFGINRAFKAIRRADVVL 263
Query: 463 LVIEAMACITEQ 474
VI+A+ +T+Q
Sbjct: 264 FVIDAVEGVTDQ 275
>gi|158339018|ref|YP_001520195.1| GTP-binding protein EngA [Acaryochloris marina MBIC11017]
gi|189037135|sp|B0C1P2.1|DER_ACAM1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|158309259|gb|ABW30876.1| GTP-binding protein engA [Acaryochloris marina MBIC11017]
Length = 453
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 153/313 (48%), Positives = 191/313 (61%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NRL G AIV D PGVTRDR Y + W +F LVDTGG+
Sbjct: 3 LPIVAIVGRPNVGKSTLVNRLTGMMDAIVHDSPGVTRDRTYRPALWNGRDFSLVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +P I +Q A+ E+ V++ +VDG
Sbjct: 62 --------VFDDQT-------EFLPF-------------IRQQVMIALAEATVVVMVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
QAG T AD EIA WLR+ D ++LAVNKCESP +GI Q ++FW L PLP+S I G
Sbjct: 94 QAGPTPADHEIAHWLRQQ--DTPVLLAVNKCESPEQGITQAAQFWELSLDEPLPVSGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG+LLD V + +ED E + +A+VGRPNVGKSS+LNA VGE+R+IVSP
Sbjct: 152 NGTGDLLDQVVEYFSETPESEDEPEIK-----VALVGRPNVGKSSLLNAFVGENRSIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD ID E Q +R IDTAGIR++ ++ E +NRAF+AIRRS VV
Sbjct: 207 ISGTTRDTIDMVVRRGE-QTYRFIDTAGIRRKKNVSYG---PEFFGINRAFKAIRRSQVV 262
Query: 462 ALVIEAMACITEQ 474
VI+A+ +TEQ
Sbjct: 263 LFVIDALDGVTEQ 275
>gi|359461399|ref|ZP_09249962.1| GTP-binding protein Der [Acaryochloris sp. CCMEE 5410]
Length = 453
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 153/313 (48%), Positives = 191/313 (61%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NRL G AIV D PGVTRDR Y + W +F LVDTGG+
Sbjct: 3 LPIVAIVGRPNVGKSTLVNRLTGMMDAIVHDSPGVTRDRTYRPALWNGRDFSLVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +P I +Q A+ E+ V++ +VDG
Sbjct: 62 --------VFDDQT-------EFLPF-------------IRQQVMIALAEATVVVMVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
QAG T AD EIA WLR+ D ++LAVNKCESP +GI Q ++FW L PLP+S I G
Sbjct: 94 QAGPTPADHEIAHWLRQQ--DTPVLLAVNKCESPEQGITQAAQFWELSLDEPLPVSGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG+LLD V + +ED E + +A+VGRPNVGKSS+LNA VGE+R+IVSP
Sbjct: 152 NGTGDLLDQVVEYFSETPESEDEPEIK-----VALVGRPNVGKSSLLNAFVGENRSIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD ID E Q +R IDTAGIR++ ++ E +NRAF+AIRRS VV
Sbjct: 207 ISGTTRDTIDMVVRRGE-QAYRFIDTAGIRRKKNVSYG---PEFFGINRAFKAIRRSQVV 262
Query: 462 ALVIEAMACITEQ 474
VI+A+ +TEQ
Sbjct: 263 LFVIDALDGVTEQ 275
>gi|332711902|ref|ZP_08431832.1| ribosome-associated GTPase EngA [Moorea producens 3L]
gi|332349230|gb|EGJ28840.1| ribosome-associated GTPase EngA [Moorea producens 3L]
Length = 463
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 155/320 (48%), Positives = 200/320 (62%), Gaps = 47/320 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA++GRPNVGKS L NRL G AIV ++PGVTRDR Y +FW + ++++VDTGG+
Sbjct: 3 LPIVAVIGRPNVGKSTLVNRLAGVTDAIVHNQPGVTRDRTYRAAFWQDRDYLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ + +VDG
Sbjct: 62 --------VFDD-------NTEFLPL-------------IREQAMAALAEASAAVLVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG TA DE IA WLR + ++LAVNKCESP++GI+ S+FW L P P+SAI G
Sbjct: 94 QAGPTAGDEAIAQWLR--IQNTPVVLAVNKCESPQQGIILASQFWELNLGEPFPVSAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELL+ + + L V+ ++ E + +AIVGRPNVGKSS+LN L GE+R+IVSP
Sbjct: 152 NGTGELLEKLVTYLPNVDNIPEIPEIK-----VAIVGRPNVGKSSLLNTLTGENRSIVSP 206
Query: 402 ISGTTRDAIDTEFT-------GPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRA 454
ISGTTRDAID G E Q +RLIDTAGIRK+ + E +NRAF+A
Sbjct: 207 ISGTTRDAIDMVVQRSADPEKGTEAQTYRLIDTAGIRKKKNVTYG---PEFFGINRAFKA 263
Query: 455 IRRSDVVALVIEAMACITEQ 474
IRRSDVV LVI+A+ +TEQ
Sbjct: 264 IRRSDVVLLVIDAIDGVTEQ 283
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 46/214 (21%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM---YGRSFWGE- 210
+ N+PE +VAIVGRPNVGKS+L N L G NR+IV G TRD + RS E
Sbjct: 168 VDNIPEIPEIKVAIVGRPNVGKSSLLNTLTGENRSIVSPISGTTRDAIDMVVQRSADPEK 227
Query: 211 ----HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQA 266
+ L+DT G+ + + N+ T G E + +A
Sbjct: 228 GTEAQTYRLIDTAGI----RKKKNV--------TYGPEFFGI---------------NRA 260
Query: 267 TAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
AI S V++ ++D G+T D+++A R + ++ VNK ++ K + ++
Sbjct: 261 FKAIRRSDVVLLVIDAIDGVTEQDQKLAG--RIADEGRAAVIVVNKWDAIEKDSYTIYDY 318
Query: 327 WS-----LGF----SPLPISAISGTGTGELLDLV 351
L F + +SA++G +LDLV
Sbjct: 319 QKQVKDRLSFIEWAEIIFVSAMTGKRVETILDLV 352
>gi|307103139|gb|EFN51402.1| hypothetical protein CHLNCDRAFT_37436 [Chlorella variabilis]
Length = 540
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 186/289 (64%), Gaps = 36/289 (12%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
VP+ LLP+VAIVGRPNVGKSALFNR+VG AIV D PGVTRDR+Y R+FWG+HEF+LV
Sbjct: 95 QVPDELLPKVAIVGRPNVGKSALFNRIVGRQVAIVYDYPGVTRDRLYTRAFWGDHEFLLV 154
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DTGG+++ ++ P E+QA + +
Sbjct: 155 DTGGLMSDAEKLPK--------------------------------EQQARPFLPAANPA 182
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPI 336
Q G T+ADEEI WLR+ + +K +ILAVNKCE+ K +Q +EFW G P+ +
Sbjct: 183 CRAFLPQTGGTSADEEIQAWLRRMHPNKPVILAVNKCENAAKADLQAAEFWGSGLEPIAV 242
Query: 337 SAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDR 396
SAISG+GTGEL++ + + L L E +R+ +AI+GRPNVGKSS+LNALVGE+R
Sbjct: 243 SAISGSGTGELMERLAAALPP---PPTLAEAADRL-EVAIIGRPNVGKSSLLNALVGEER 298
Query: 397 TIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEA 445
+IVS ++GTTRDAIDT+ +G KF+L+DTAG+RKR AIA S EA
Sbjct: 299 SIVSSMAGTTRDAIDTDLVLTDGSKFKLVDTAGVRKRTAIAGSKDGAEA 347
>gi|56751772|ref|YP_172473.1| GTP-binding protein EngA [Synechococcus elongatus PCC 6301]
gi|81301149|ref|YP_401357.1| GTP-binding protein EngA [Synechococcus elongatus PCC 7942]
gi|81820595|sp|Q5N167.1|DER_SYNP6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123556312|sp|Q31KP9.1|DER_SYNE7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|56686731|dbj|BAD79953.1| GTP-binding protein engA [Synechococcus elongatus PCC 6301]
gi|81170030|gb|ABB58370.1| Small GTP-binding protein domain [Synechococcus elongatus PCC 7942]
Length = 453
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 158/313 (50%), Positives = 205/313 (65%), Gaps = 40/313 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAILGRPNVGKSTLVNRLAGSREAIVHDEPGVTRDRTYQEAFWCDRDFTVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA A+ E+ + + +VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAELALAEAALAVLVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAGLTAAD EIADWLR + ++ I++AVNKCESP KG Q +EFWSLGF PLPIS+I G
Sbjct: 94 QAGLTAADNEIADWLR--HQNRPIVVAVNKCESPDKGAAQAAEFWSLGFGEPLPISSIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD V L+ + ++ +E I +AIVGRPNVGKSS+LN+ +GE R IVSP
Sbjct: 152 SGTGELLDRV---LELLPPADEAAGDETEI-GVAIVGRPNVGKSSLLNSFLGEQRAIVSP 207
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDAIDT + Q++RL+DTAGIR++ + E +NR+F+AIRR+DV
Sbjct: 208 IAGTTRDAIDTVIERND-QRYRLVDTAGIRRKRGVDYG---PEFFGINRSFKAIRRADVC 263
Query: 462 ALVIEAMACITEQ 474
LVI+ + +T+Q
Sbjct: 264 LLVIDVLDGVTDQ 276
>gi|434399542|ref|YP_007133546.1| GTP-binding protein engA [Stanieria cyanosphaera PCC 7437]
gi|428270639|gb|AFZ36580.1| GTP-binding protein engA [Stanieria cyanosphaera PCC 7437]
Length = 453
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 158/313 (50%), Positives = 199/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL G +AIV DEPG+TRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGDQQAIVHDEPGITRDRTYRPAFWRDRDFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I +QA AA+ E+ V IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IRQQAMAALAEAAVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T D EIADWLR+ + +LAVNKCES +G++Q ++FW LG P PISAI G
Sbjct: 94 QTGPTEGDREIADWLRQQNVPA--LLAVNKCESVEQGLIQAAQFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG+LLD + + L V D + E I +AIVGRPNVGKSS+LNAL GE R IVSP
Sbjct: 152 SGTGDLLDELITHLPSV----DQISETEEI-KVAIVGRPNVGKSSLLNALTGEQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT E + +RLIDTAGIR++ + E S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDTLVERDE-KTYRLIDTAGIRRKKNVDYGA---EFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
VI+ + +TEQ
Sbjct: 263 LFVIDVLDGVTEQ 275
>gi|116075028|ref|ZP_01472288.1| GTP-binding protein EngA [Synechococcus sp. RS9916]
gi|116067225|gb|EAU72979.1| GTP-binding protein EngA [Synechococcus sp. RS9916]
Length = 455
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 155/316 (49%), Positives = 192/316 (60%), Gaps = 48/316 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDEPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA A+ E+CV + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QANLAMAEACVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TAADE IA+WLR +LAVNKCESP +G+ +EFWSLG P PISAI
Sbjct: 93 GQQGMTAADESIAEWLRSQNCP--TLLAVNKCESPDQGLAMAAEFWSLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG+LLD V + L K EG E + +AIVGRPNVGKSS+LNA+ GE R I
Sbjct: 151 GAGTGDLLDQVLTFLPPKDEEG------EGDEPIQMAIVGRPNVGKSSLLNAICGEQRAI 204
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VSPI GTTRD IDT +G ++L+DTAGIR+R ++ E +NR+F+AI RS
Sbjct: 205 VSPIRGTTRDTIDTNIE-RQGMPWKLVDTAGIRRRRSVNYG---PEFFGINRSFKAIERS 260
Query: 459 DVVALVIEAMACITEQ 474
DV LVI+A+ +TEQ
Sbjct: 261 DVCVLVIDALDGVTEQ 276
>gi|209527936|ref|ZP_03276422.1| small GTP-binding protein [Arthrospira maxima CS-328]
gi|209491626|gb|EDZ91995.1| small GTP-binding protein [Arthrospira maxima CS-328]
Length = 453
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 192/312 (61%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PG+TRDR Y ++W + EF +VDTGG+
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLTQTQDAIVHDQPGMTRDRTYRSAYWQDREFTVVDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ +D E +PL I QA A+ E+ I +VDGQ
Sbjct: 62 -------VFDD-------DTEFLPL-------------IREQALMALAEATAAILVVDGQ 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
G T DE IA WLR+ + I+LAVNKCESP +G+ Q ++FW LG +P PIS+I G+
Sbjct: 95 TGPTGGDEAIASWLRQQKVP--ILLAVNKCESPTQGLTQAAQFWELGLGNPFPISSIHGS 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTGELLD + L ED EE R +AIVGRPNVGKSS+LN +G++R IVSPI
Sbjct: 153 GTGELLDALIENLPASTDNED--SEELR---VAIVGRPNVGKSSLLNTFLGQERAIVSPI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
SGTTRDAIDT G +RL+DTAGIR++ + E +NRAF+AIRR+DVV
Sbjct: 208 SGTTRDAIDT-IVEHNGNTYRLVDTAGIRRKKHVEYGA---EFFGINRAFKAIRRADVVL 263
Query: 463 LVIEAMACITEQ 474
VI+A+ +T+Q
Sbjct: 264 FVIDAVEGVTDQ 275
>gi|376005884|ref|ZP_09783254.1| GTP-binding protein EngA [Arthrospira sp. PCC 8005]
gi|375325736|emb|CCE19007.1| GTP-binding protein EngA [Arthrospira sp. PCC 8005]
Length = 453
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 192/312 (61%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PG+TRDR Y ++W + EF +VDTGG+
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLTQTQDAIVHDQPGMTRDRTYRSAYWQDREFTVVDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ +D E +PL I QA A+ E+ I +VDGQ
Sbjct: 62 -------VFDD-------DTEFLPL-------------IREQALMALAEATAAILVVDGQ 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
G T DE IA WLR+ + I+LAVNKCESP +G+ Q ++FW LG +P PIS+I G+
Sbjct: 95 TGPTGGDEAIASWLRQQKVP--ILLAVNKCESPTQGLTQAAQFWELGLGNPFPISSIHGS 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTGELLD + L ED EE R +AIVGRPNVGKSS+LN +G++R IVSPI
Sbjct: 153 GTGELLDALIENLPASTDNED--SEELR---VAIVGRPNVGKSSLLNTFLGQERAIVSPI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
SGTTRDAIDT G +RL+DTAGIR++ + E +NRAF+AIRR+DVV
Sbjct: 208 SGTTRDAIDT-IVEHNGNTYRLVDTAGIRRKKHVEYGA---EFFGINRAFKAIRRADVVL 263
Query: 463 LVIEAMACITEQ 474
VI+A+ +T+Q
Sbjct: 264 FVIDAVEGVTDQ 275
>gi|148241565|ref|YP_001226722.1| GTP-binding protein EngA [Synechococcus sp. RCC307]
gi|166225929|sp|A5GR60.1|DER_SYNR3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|147849875|emb|CAK27369.1| GTP-binding protein engA [Synechococcus sp. RCC307]
Length = 452
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/316 (49%), Positives = 191/316 (60%), Gaps = 47/316 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y FWG F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLCRSRDAIVHDEPGVTRDRTYQEGFWGGRTFRVVDTGGLV 62
Query: 223 --NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ S+ P I E QA+ A+ E+CV + +V
Sbjct: 63 FDDDSEFLPEIRE-------------------------------QASLAMAEACVALVIV 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ GLTAADE IA WLR+ ++L VNKCESP +G+ +EFW+LG P PISAI
Sbjct: 92 DGQQGLTAADEAIAAWLRQQKCP--VLLGVNKCESPEQGLAMAAEFWALGLGEPKPISAI 149
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIP-AIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG+LLD V L + EEE P +AIVGRPNVGKSS+LN + GE+R I
Sbjct: 150 HGAGTGDLLDQVLDFLPPQD------EEEAPEPIQMAIVGRPNVGKSSLLNTVCGENRAI 203
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VSPI GTTRD IDT EGQ ++L+DTAGIR+R ++ E +NR+F+AI RS
Sbjct: 204 VSPIRGTTRDTIDTSIE-REGQSWKLLDTAGIRRRRSVNYG---PEFFGINRSFKAIERS 259
Query: 459 DVVALVIEAMACITEQ 474
DV LVI+A +TEQ
Sbjct: 260 DVCVLVIDAEEGVTEQ 275
>gi|428319778|ref|YP_007117660.1| GTP-binding protein engA [Oscillatoria nigro-viridis PCC 7112]
gi|428243458|gb|AFZ09244.1| GTP-binding protein engA [Oscillatoria nigro-viridis PCC 7112]
Length = 453
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/313 (49%), Positives = 196/313 (62%), Gaps = 42/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL AIV DEPG+TRDR Y ++WG+ E+ +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLANTQDAIVHDEPGITRDRTYRPAYWGDREYQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------ETEFLPL-------------IREQAMAALAEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLT DE IA WLR + +ILAVNKCES + G+ Q ++FW LG P PIS I G
Sbjct: 94 QTGLTGGDEAIASWLRLQKVP--VILAVNKCESEKTGLTQAADFWQLGLGEPYPISGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + + L TE L E E +AI+GRPNVGKSS+LNA +GE+R IVSP
Sbjct: 152 NGTGELLDKLITYLP----TEVLSEVEE--IKVAIIGRPNVGKSSLLNAFLGENRAIVSP 205
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT G+ +RLIDTAGIRK+ + E +NRAF+AIRR++V+
Sbjct: 206 ISGTTRDAIDT-LVERNGKTYRLIDTAGIRKKKNVEYGA---EFFGINRAFKAIRRANVI 261
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 262 LLVIDAIDGVTDQ 274
>gi|317968893|ref|ZP_07970283.1| GTP-binding protein Der [Synechococcus sp. CB0205]
Length = 454
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/318 (47%), Positives = 194/318 (61%), Gaps = 51/318 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y + +W + F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLCRSREAIVHDEPGVTRDRTYQQGYWRDRHFKVVDTGGLV 62
Query: 223 --NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ S+ P I E QA A+ E+ V + +
Sbjct: 63 FDDDSEFLPEIRE-------------------------------QANLALSEASVAVVIA 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ GLTAADE IA+WLR + + ++LAVNKCESP G+ +EFWSLG P PISAI
Sbjct: 92 DGQQGLTAADESIAEWLRGHNVP--VLLAVNKCESPEAGLAMAAEFWSLGLGEPFPISAI 149
Query: 340 SGTGTGELLDLVCSEL---KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDR 396
G GTG+LLD + L +++EG E + +AIVGRPNVGKSS+LNA+ GE R
Sbjct: 150 HGAGTGDLLDRMVDHLPAAEELEGEEPI--------QMAIVGRPNVGKSSLLNAVCGEKR 201
Query: 397 TIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIR 456
IVSPI GTTRD IDT EG+ ++L+DTAGIR+R ++ E +NR+F+AI
Sbjct: 202 AIVSPIRGTTRDTIDTSIE-REGKPWKLLDTAGIRRRRSVNYG---PEYFGINRSFKAIE 257
Query: 457 RSDVVALVIEAMACITEQ 474
RSDV LVI+A+ +TEQ
Sbjct: 258 RSDVCVLVIDALDGVTEQ 275
>gi|87125615|ref|ZP_01081460.1| putative GTP-binding protein [Synechococcus sp. RS9917]
gi|86166915|gb|EAQ68177.1| putative GTP-binding protein [Synechococcus sp. RS9917]
Length = 455
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/316 (49%), Positives = 190/316 (60%), Gaps = 48/316 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y +WG+ EF LVDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDEPGVTRDRTYQDGYWGDREFKLVDTGGLVF 63
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA+ A+ E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QASLAMAEASVAVVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TAADE IA+WLR +LAVNKCESP +G+ +EFW LG P PISAI
Sbjct: 93 GQQGVTAADESIAEWLRSQACP--TLLAVNKCESPEQGLAMAAEFWGLGLGEPYPISAIH 150
Query: 341 GTGTGELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTGELLD V + L K EG +E +AI+GRPNVGKSS+LNA+ GE R I
Sbjct: 151 GAGTGELLDQVLTFLPPKDQEG------DEAEPIQMAIIGRPNVGKSSLLNAICGEPRAI 204
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VSPI GTTRD IDT G +RL+DTAGIR+R ++ E +NR+F+AI RS
Sbjct: 205 VSPIRGTTRDTIDTRLE-RNGLSWRLVDTAGIRRRRSVHYG---PEFFGINRSFKAIERS 260
Query: 459 DVVALVIEAMACITEQ 474
DV LVI+A+ +TEQ
Sbjct: 261 DVCVLVIDALDGVTEQ 276
>gi|33239840|ref|NP_874782.1| GTP-binding protein EngA [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|41017014|sp|Q7VDI8.1|DER_PROMA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|33237366|gb|AAP99434.1| Predicted GTPase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 456
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 153/314 (48%), Positives = 190/314 (60%), Gaps = 44/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y FWG+ EF LVDTGG++
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLCQSREAIVHDQPGVTRDRSYQDGFWGDREFKLVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+++ P I E QA A+ E+ + + +VD
Sbjct: 64 DDETEFLPEIRE-------------------------------QANLALSEASIALLIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ GLTAADE IA WLR + + I+LAVNKCES G+ EFW LG P P+SAI
Sbjct: 93 GQQGLTAADEVIAAWLRHSKCE--ILLAVNKCESVELGLSMAGEFWRLGLGEPYPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTGELLD + S L E L+++E +AIVGRPNVGKSS+LNA+ GE R IVS
Sbjct: 151 GAGTGELLDRLISILPPKE----LIKDEEEPIQVAIVGRPNVGKSSLLNAICGEKRAIVS 206
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRD IDT EG+ ++LIDTAGIR+R ++ E +NR+F+AI RSDV
Sbjct: 207 AIRGTTRDTIDTSIV-REGKLWKLIDTAGIRRRKSVNYG---PEFFGINRSFKAIERSDV 262
Query: 461 VALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 263 CVLVIDALDGVTEQ 276
>gi|78213545|ref|YP_382324.1| GTP-binding protein EngA [Synechococcus sp. CC9605]
gi|123577697|sp|Q3AI13.1|DER_SYNSC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|78198004|gb|ABB35769.1| Small GTP-binding protein domain [Synechococcus sp. CC9605]
Length = 455
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 157/316 (49%), Positives = 194/316 (61%), Gaps = 48/316 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA A+EE+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALEEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ GLTAADE IA++LR + +LAVNKCESP +G+ EFWSLG P PISAI
Sbjct: 93 GQQGLTAADESIAEFLRSHRCP--TLLAVNKCESPEQGLAMAGEFWSLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTGELLD V + L K EG +EE I +AI+GRPNVGKSS+LNA+ GE R I
Sbjct: 151 GAGTGELLDQVLTFLPPKDQEG-----DEEEPI-QMAIIGRPNVGKSSLLNAICGEQRAI 204
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VSPI GTTRD IDT E + +RL+DTAGIR+R ++ E +NR+F+AI RS
Sbjct: 205 VSPIRGTTRDTIDTSII-RENRPWRLVDTAGIRRRRSVNYG---PEFFGINRSFKAIERS 260
Query: 459 DVVALVIEAMACITEQ 474
DV LVI+A+ +TEQ
Sbjct: 261 DVCVLVIDALDGVTEQ 276
>gi|334119804|ref|ZP_08493888.1| GTP-binding protein engA [Microcoleus vaginatus FGP-2]
gi|333457445|gb|EGK86068.1| GTP-binding protein engA [Microcoleus vaginatus FGP-2]
Length = 453
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 155/313 (49%), Positives = 195/313 (62%), Gaps = 42/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS + NRL AIV DEPG+TRDR Y ++WG+ E+ +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTIVNRLANTQDAIVHDEPGITRDRTYRPAYWGDREYQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------ETEFLPL-------------IREQAMAALAEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLT DE IA WLR + +ILAVNKCES G+ Q ++FW LG P P+S I G
Sbjct: 94 QTGLTGGDESIASWLRLQKVP--VILAVNKCESENTGLTQAADFWQLGLGEPYPVSGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + + L TE L E E +AI+GRPNVGKSS+LNA +GE+R IVSP
Sbjct: 152 NGTGELLDKLITYLP----TEVLPEVEE--IKVAIIGRPNVGKSSLLNAFLGENRAIVSP 205
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT G+ +RLIDTAGIRK+ + E +NRAF+AIRR+DV+
Sbjct: 206 ISGTTRDAIDT-LVERNGKTYRLIDTAGIRKKKNVEYGA---EFFGINRAFKAIRRADVI 261
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 262 LLVIDAIDGVTDQ 274
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 43/211 (20%)
Query: 155 IGNVPEHLLP-----RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG 209
I +P +LP +VAI+GRPNVGKS+L N +G NRAIV G TRD +
Sbjct: 162 ITYLPTEVLPEVEEIKVAIIGRPNVGKSSLLNAFLGENRAIVSPISGTTRDAIDTLVERN 221
Query: 210 EHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAA 269
+ L+DT G+ + + N+ G E + +A A
Sbjct: 222 GKTYRLIDTAGI----RKKKNV--------EYGAEFFGI---------------NRAFKA 254
Query: 270 IEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF--- 326
I + VI+ ++D G+T D+++AD R + + I+ VNK ++ K + E+
Sbjct: 255 IRRADVILLVIDAIDGVTDQDQKLAD--RISEEGRACIIVVNKWDAVEKDSDTIYEYERE 312
Query: 327 -----WSLGFSPLP-ISAISGTGTGELLDLV 351
+ L ++ + +SA+SG ++++LV
Sbjct: 313 VRTRLYFLDWAEMIFVSAMSGQRVEKIIELV 343
>gi|260434834|ref|ZP_05788804.1| ribosome-associated GTPase EngA [Synechococcus sp. WH 8109]
gi|260412708|gb|EEX06004.1| ribosome-associated GTPase EngA [Synechococcus sp. WH 8109]
Length = 455
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 156/316 (49%), Positives = 193/316 (61%), Gaps = 48/316 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA A+EE+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALEEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ GLTAADE IA++LR + +LAVNKCESP +G+ EFWSLG P PISAI
Sbjct: 93 GQQGLTAADESIAEFLRSHRCP--TLLAVNKCESPEQGLAMAGEFWSLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTGELLD V + K EG +EE I +AI+GRPNVGKSS+LNA+ GE R I
Sbjct: 151 GAGTGELLDQVLTFFSPKDQEG-----DEEEPI-QMAIIGRPNVGKSSLLNAICGEQRAI 204
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VSPI GTTRD IDT E + +RL+DTAGIR+R ++ E +NR+F+AI RS
Sbjct: 205 VSPIRGTTRDTIDTSII-RENRPWRLVDTAGIRRRRSVNYG---PEFFGINRSFKAIERS 260
Query: 459 DVVALVIEAMACITEQ 474
DV LVI+A+ +TEQ
Sbjct: 261 DVCVLVIDALDGVTEQ 276
>gi|300869581|ref|ZP_07114162.1| GTP-binding protein engA [Oscillatoria sp. PCC 6506]
gi|300332449|emb|CBN59362.1| GTP-binding protein engA [Oscillatoria sp. PCC 6506]
Length = 454
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/313 (49%), Positives = 195/313 (62%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS + NR +IV D+PG+TRDR Y ++WG+ EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTIVNRFAESQDSIVHDQPGMTRDRTYKNAYWGDREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------NTEFLPL-------------IREQAMAALAEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLT DE IA+WLR+ + ++LAVNKCES +G+ Q ++FW LG P PIS I G
Sbjct: 94 QIGLTGGDEAIAEWLRQQRVP--VLLAVNKCESETEGLTQAAQFWELGLGEPFPISGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + S L V G +EE +AIVGRPNVGKSS+LNA +GE R IVSP
Sbjct: 152 NGTGELLDELISHLPAV-GELPEIEETK----VAIVGRPNVGKSSLLNAFLGETRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT G +RLIDTAGIRK+ + E +NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDT-VVERNGTTYRLIDTAGIRKKKNVEYG---PEFFGINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 263 LLVIDAVDGVTDQ 275
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 29/172 (16%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+G +PE +VAIVGRPNVGKS+L N +G RAIV G TRD + +
Sbjct: 168 VGELPEIEETKVAIVGRPNVGKSSLLNAFLGETRAIVSPISGTTRDAIDTVVERNGTTYR 227
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ + + N+ G E + +A AI +
Sbjct: 228 LIDTAGI----RKKKNV--------EYGPEFFGI---------------NRAFKAIRRAD 260
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
V++ ++D G+T D+++AD R + + ++ VNK ++ K + ++
Sbjct: 261 VVLLVIDAVDGVTDQDQKLAD--RISEEGRACVIVVNKWDAIEKDSTTIYDY 310
>gi|33865191|ref|NP_896750.1| GTP-binding protein EngA [Synechococcus sp. WH 8102]
gi|41017009|sp|Q7U8G2.1|DER_SYNPX RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|33638875|emb|CAE07172.1| putative GTP-binding protein [Synechococcus sp. WH 8102]
Length = 455
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 156/316 (49%), Positives = 194/316 (61%), Gaps = 48/316 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDEPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA A+EE+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALAMEEASVAVVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TAADE IA++LR +LAVNKCESP +G+ +EFWSLG P PISAI
Sbjct: 93 GQQGITAADESIAEFLRSRPCP--TLLAVNKCESPEQGLAMAAEFWSLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG+LLD V + L K EG +EE I +AI+GRPNVGKSS+LNA+ GE R I
Sbjct: 151 GVGTGDLLDQVLTFLPPKDQEG-----DEEEPI-QMAIIGRPNVGKSSLLNAICGEQRAI 204
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VSPI GTTRD IDT E + +RL+DTAGIR+R ++ E +NR+F+AI RS
Sbjct: 205 VSPIRGTTRDTIDTNIV-RENRPWRLVDTAGIRRRRSVNYG---PEYFGINRSFKAIDRS 260
Query: 459 DVVALVIEAMACITEQ 474
DV LVI+A+ +TEQ
Sbjct: 261 DVCVLVIDALDGVTEQ 276
>gi|124023844|ref|YP_001018151.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9303]
gi|123964130|gb|ABM78886.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str.
MIT 9303]
Length = 461
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/314 (49%), Positives = 189/314 (60%), Gaps = 44/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y FWG+ EF +VDTGG++
Sbjct: 10 PIVAIIGRPNVGKSTLVNRLCRSREAIVDDKPGVTRDRTYQDGFWGDREFKVVDTGGLVF 69
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA A+ E+ V + +VD
Sbjct: 70 DDDSEFLPEIRE-------------------------------QANLALAEASVALVIVD 98
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TAADE IA+WLR + AVNKCESP +G+ +EFW LG P PISAI
Sbjct: 99 GQQGVTAADESIAEWLRMQPCPTLV--AVNKCESPDQGLAMAAEFWRLGLGEPFPISAIH 156
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG+LLD V S L + EE+ I +AI+GRPNVGKSS+LNA+ GE R IVS
Sbjct: 157 GAGTGDLLDRVLSLLPP---KHEEAEEDEPI-QMAIIGRPNVGKSSLLNAICGEPRAIVS 212
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI GTTRD IDT EG +RLIDTAGIR+R ++ E +NR+F+AI RSDV
Sbjct: 213 PIRGTTRDTIDTRLE-REGHPWRLIDTAGIRRRRSVNYG---PEFFGINRSFKAIERSDV 268
Query: 461 VALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 269 CVLVIDALDGVTEQ 282
>gi|33862476|ref|NP_894036.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9313]
gi|41017013|sp|Q7V8X0.1|DER_PROMM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|33640589|emb|CAE20378.1| GTP-binding protein (HSR1-related):AAA ATPase superfamily
[Prochlorococcus marinus str. MIT 9313]
Length = 455
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/314 (48%), Positives = 187/314 (59%), Gaps = 44/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y FWG+ EF +VDTGG++
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLCRSREAIVDDKPGVTRDRTYQDGFWGDREFKVVDTGGLVF 63
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA A+ E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QANLALAEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TAADE IA+WLR + AVNKCESP +G+ +EFW LG P PISAI
Sbjct: 93 GQQGVTAADESIAEWLRTQPCPTLV--AVNKCESPDQGLAMAAEFWRLGLGEPFPISAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG+LLD V S L EE+ +AI+GRPNVGKSS+LNA+ GE R IVS
Sbjct: 151 GAGTGDLLDRVLSLLPPKHEE----PEEDEPIQMAIIGRPNVGKSSLLNAICGEPRAIVS 206
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI GTTRD IDT EG +RLIDTAGIR+R ++ E +NR+F+AI RSDV
Sbjct: 207 PIRGTTRDTIDTRLE-REGHPWRLIDTAGIRRRRSVNYG---PEFFGINRSFKAIERSDV 262
Query: 461 VALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 263 CVLVIDALDGVTEQ 276
>gi|113954294|ref|YP_729814.1| GTP-binding protein EngA [Synechococcus sp. CC9311]
gi|123031842|sp|Q0ICK8.1|DER_SYNS3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|113881645|gb|ABI46603.1| GTP-binding protein EngA [Synechococcus sp. CC9311]
Length = 455
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 152/314 (48%), Positives = 191/314 (60%), Gaps = 44/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA+ A+ E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QASLALAEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ GLTAADE IA+WLR +LAVNKCESP +G+ +EFW LG P PISAI
Sbjct: 93 GQQGLTAADESIAEWLRTQNCK--TLLAVNKCESPEQGLGMAAEFWRLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GT ELLD V + L + D EE I ++I+GRPNVGKSS+LN++ GE R IVS
Sbjct: 151 GAGTAELLDQVLTFLPPKDEESD---EEEPI-QLSIIGRPNVGKSSLLNSICGETRAIVS 206
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI GTTRD IDT E +++RLIDTAGIR+R ++ E +NR+F+AI RSDV
Sbjct: 207 PIRGTTRDTIDTRIE-RENRRWRLIDTAGIRRRRSVNYG---PEFFGINRSFKAIERSDV 262
Query: 461 VALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 263 CVLVIDALDGVTEQ 276
>gi|352096373|ref|ZP_08957253.1| GTP-binding protein engA [Synechococcus sp. WH 8016]
gi|351677067|gb|EHA60218.1| GTP-binding protein engA [Synechococcus sp. WH 8016]
Length = 455
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 153/314 (48%), Positives = 189/314 (60%), Gaps = 44/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA A+ E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAGLALAEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ GLTAADE IA+WLR +LAVNKCESP +G+ +EFW LG P PISAI
Sbjct: 93 GQQGLTAADESIAEWLRTQQCK--TLLAVNKCESPEQGLAMAAEFWRLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GT ELLD V + L + D EE I ++I+GRPNVGKSS+LNA+ GE R IVS
Sbjct: 151 GAGTAELLDQVLTFLPPKDEESD---EEEPI-QLSIIGRPNVGKSSLLNAICGETRAIVS 206
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI GTTRD IDT E + +RLIDTAGIR+R ++ E +NR+F+AI RSDV
Sbjct: 207 PIRGTTRDTIDTRIE-RENRPWRLIDTAGIRRRRSVNYG---PEFFGINRSFKAIERSDV 262
Query: 461 VALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 263 CVLVIDALDGVTEQ 276
>gi|427722459|ref|YP_007069736.1| GTP-binding protein engA [Leptolyngbya sp. PCC 7376]
gi|427354179|gb|AFY36902.1| GTP-binding protein engA [Leptolyngbya sp. PCC 7376]
Length = 454
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 151/313 (48%), Positives = 197/313 (62%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +A++GRPNVGKS L NR+ G +AIV DEPG+TRDR Y FW + F +VDTGG+
Sbjct: 3 LPIIAVIGRPNVGKSTLVNRIAGDQQAIVHDEPGITRDRTYRPGFWQDRNFQIVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D+ E +PL I QA A+ E+ V IF+VDG
Sbjct: 62 --------VFDDIE-------EFLPL-------------IREQAAIALSEASVGIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G++AAD EIA+WLR+ + I++AVNKCES + Q +EFW LG P PISAI G
Sbjct: 94 KNGISAADTEIAEWLRQQKVP--IVIAVNKCESAEQSYAQAAEFWELGMGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG++LD V L + DL EE+ +AI+GRPNVGKSS+LNA+ GE R IVSP
Sbjct: 152 SGTGDMLDKVIEHLPAM---GDL--EEDTTINVAIIGRPNVGKSSLLNAMTGEKRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAID Q++RLIDTAGIR++ + E S+NRAF+AIRRSDVV
Sbjct: 207 ISGTTRDAIDM-LVERNDQQYRLIDTAGIRRKKNVNYGA---EFFSINRAFKAIRRSDVV 262
Query: 462 ALVIEAMACITEQ 474
V++ + +TEQ
Sbjct: 263 LFVVDVLDGVTEQ 275
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 38/206 (18%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+G++ E VAI+GRPNVGKS+L N + G RAIV G TRD + + ++
Sbjct: 168 MGDLEEDTTINVAIIGRPNVGKSSLLNAMTGEKRAIVSPISGTTRDAIDMLVERNDQQYR 227
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ + + N+ G E + +A AI S
Sbjct: 228 LIDTAGI----RRKKNV--------NYGAEFFSI---------------NRAFKAIRRSD 260
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------- 325
V++F+VD G+T D ++A + + + ++L VNK ++ K ++E
Sbjct: 261 VVLFVVDVLDGVTEQDLKLAGRIIEE--GRAVVLIVNKWDAVEKDTYTINEHKKELQARL 318
Query: 326 FWSLGFSPLPISAISGTGTGELLDLV 351
F+ L ISA +G ++LDLV
Sbjct: 319 FFMEWAEMLFISAQTGQRVNKILDLV 344
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 15/93 (16%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTG-PEGQKFRLIDTA 428
++P IA++GRPNVGKS+++N + G+ + IV G TRD T G + + F+++DT
Sbjct: 2 KLPIIAVIGRPNVGKSTLVNRIAGDQQAIVHDEPGITRDR--TYRPGFWQDRNFQIVDTG 59
Query: 429 G------------IRKRAAIASSGSTTEALSVN 449
G IR++AAIA S ++ V+
Sbjct: 60 GIVFDDIEEFLPLIREQAAIALSEASVGIFVVD 92
>gi|108864612|gb|ABA94923.2| small GTP-binding protein domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 344
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/154 (81%), Positives = 139/154 (90%)
Query: 321 MQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRP 380
MQ +FWSLGFSPLPISAI+GTGTGELLD+VCSEL E + + E+ N IPAIAIVGRP
Sbjct: 1 MQALDFWSLGFSPLPISAITGTGTGELLDMVCSELSNFEELDGVEEDGNYIPAIAIVGRP 60
Query: 381 NVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSG 440
NVGKSSILNALVGEDRTIVSP+SGTTRDAIDTEFT +GQK++LIDTAGIR+RAA+AS+G
Sbjct: 61 NVGKSSILNALVGEDRTIVSPVSGTTRDAIDTEFTTEDGQKYKLIDTAGIRRRAAVASAG 120
Query: 441 STTEALSVNRAFRAIRRSDVVALVIEAMACITEQ 474
STTE LSV RAFRAIRRSDVVALV+EAMACITEQ
Sbjct: 121 STTETLSVKRAFRAIRRSDVVALVVEAMACITEQ 154
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 37/161 (22%)
Query: 161 HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDT 218
+ +P +AIVGRPNVGKS++ N LVG +R IV G TRD + F E ++ L+DT
Sbjct: 49 NYIPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAI-DTEFTTEDGQKYKLIDT 107
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE----RQATAAIEESC 274
G+ R AAVA S E ++A AI S
Sbjct: 108 AGI----------------------------RRRAAVASAGSTTETLSVKRAFRAIRRSD 139
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
V+ +V+ A +T D +IA+ + K K ++ VNK ++
Sbjct: 140 VVALVVEAMACITEQDYKIAERIEKE--GKACVIVVNKWDT 178
>gi|86605901|ref|YP_474664.1| GTP-binding protein EngA [Synechococcus sp. JA-3-3Ab]
gi|123506716|sp|Q2JV46.1|DER_SYNJA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|86554443|gb|ABC99401.1| GTP-binding protein EngA [Synechococcus sp. JA-3-3Ab]
Length = 459
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/313 (48%), Positives = 200/313 (63%), Gaps = 39/313 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS+L NRL G AIV DEPG+TRDR+Y W +VDTGG++
Sbjct: 3 LPLVAVVGRPNVGKSSLVNRLAGVRSAIVHDEPGITRDRLYQEVEWNGRRLRVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +P I +QA AA+ E+ +IF+VDG
Sbjct: 63 FGDDS----------------EFLP-------------HIRQQAMAAMAEAHAVIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ GLT AD+E+ADWLR+ + +++AVNKCES + G+ Q + FW LG P+P SA+ G
Sbjct: 94 REGLTPADKELADWLRRQPLP--VVVAVNKCESGQLGLAQAAAFWELGLGEPIPCSAVHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G ELL+ V L +V ++ +E + I A+AIVGRPNVGKSS+LN LVG +R IVSP
Sbjct: 152 NGVAELLEAVLPHLPEV--AQEAADEPDPI-AVAIVGRPNVGKSSLLNRLVGSERAIVSP 208
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDA+DT EGQ +RLIDTAGIR+++ + E S+NRAF+AI+RSDVV
Sbjct: 209 IAGTTRDAVDT-LVEWEGQSYRLIDTAGIRRKSRVEYG---VEFFSINRAFKAIQRSDVV 264
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 265 LLVIDALEGVTEQ 277
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 39/193 (20%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS+L NRLVG RAIV G TRD + W + L+DT G+ S
Sbjct: 181 VAIVGRPNVGKSSLLNRLVGSERAIVSPIAGTTRDAVDTLVEWEGQSYRLIDTAGIRRKS 240
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + G+E + +A AI+ S V++ ++D G
Sbjct: 241 RVE------------YGVEFFSI---------------NRAFKAIQRSDVVLLVIDALEG 273
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSEF--------WSLGFSPLP- 335
+T D+ +A R + I+ VNK ++ K ++E+ + + ++PL
Sbjct: 274 VTEQDQRLAG--RIEEEGRACIIVVNKWDAVENKDTHTINEYTREIRERLYFIDWAPLLF 331
Query: 336 ISAISGTGTGELL 348
+SA++G T ++
Sbjct: 332 VSALTGQRTHKIF 344
>gi|148238904|ref|YP_001224291.1| GTP-binding protein EngA [Synechococcus sp. WH 7803]
gi|166225928|sp|A5GJ79.1|DER_SYNPW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|147847443|emb|CAK22994.1| GTP-binding protein engA [Synechococcus sp. WH 7803]
Length = 455
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/317 (47%), Positives = 194/317 (61%), Gaps = 50/317 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y +WG+ +F +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCHSREAIVHDEPGVTRDRTYQDGYWGDRDFKVVDTGGLVF 63
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA A+EE+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALEEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TA+DE IA++LR +LAVNKCESP +G+ +EFWSLG P PISAI
Sbjct: 93 GQQGVTASDEAIAEFLRGQRCPA--LLAVNKCESPEQGLAMAAEFWSLGLGEPYPISAIH 150
Query: 341 GTGTGELLDLVCSEL--KKVEG-TEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRT 397
G GT ELLD V + L K EG +E+ ++ +AI+GRPNVGKSS+LNA+ GE R
Sbjct: 151 GAGTAELLDQVLTYLPPKSEEGDSEEPIQ-------LAIIGRPNVGKSSLLNAICGEQRA 203
Query: 398 IVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRR 457
IVSPI GTTRD IDT E + +RL+DTAGIR+R ++ E +NR+F+AI R
Sbjct: 204 IVSPIRGTTRDTIDTSLV-RENRPWRLVDTAGIRRRRSVNYG---PEFFGINRSFKAIER 259
Query: 458 SDVVALVIEAMACITEQ 474
SDV LVI+A+ +TEQ
Sbjct: 260 SDVCVLVIDALDGVTEQ 276
>gi|88809283|ref|ZP_01124792.1| GTP-binding protein EngA [Synechococcus sp. WH 7805]
gi|88787225|gb|EAR18383.1| GTP-binding protein EngA [Synechococcus sp. WH 7805]
Length = 455
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/317 (47%), Positives = 194/317 (61%), Gaps = 50/317 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y +W + EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCHSREAIVHDEPGVTRDRTYQDGYWSDREFKVVDTGGLVF 63
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA A+EE+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALEEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TA+DE IA++LR +LAVNKCESP +G+ +EFWSLG P PISAI
Sbjct: 93 GQQGVTASDEAIAEFLRGQRCPA--LLAVNKCESPEQGLAMAAEFWSLGLGEPYPISAIH 150
Query: 341 GTGTGELLDLVCSEL--KKVEG-TEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRT 397
G GT ELLD V + L K EG +E+ ++ +AI+GRPNVGKSS+LNA+ GE R
Sbjct: 151 GAGTAELLDQVLTYLPPKSQEGDSEEPIQ-------LAIIGRPNVGKSSLLNAICGEQRA 203
Query: 398 IVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRR 457
IVSPI GTTRD IDT E + +RL+DTAGIR+R +++ E +NR+F+AI R
Sbjct: 204 IVSPIRGTTRDTIDTSLV-RENRPWRLVDTAGIRRRRSVSYG---PEFFGINRSFKAIER 259
Query: 458 SDVVALVIEAMACITEQ 474
SDV LVI+A+ +TEQ
Sbjct: 260 SDVCVLVIDALDGVTEQ 276
>gi|427704197|ref|YP_007047419.1| ribosome-associated GTPase EngA [Cyanobium gracile PCC 6307]
gi|427347365|gb|AFY30078.1| ribosome-associated GTPase EngA [Cyanobium gracile PCC 6307]
Length = 454
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/315 (47%), Positives = 190/315 (60%), Gaps = 45/315 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA++GRPNVGKS L NRL AIV D+PGVTRDR Y FWG+ F +VDTGG++
Sbjct: 3 LPVVAVIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQEGFWGDRTFRVVDTGGLV 62
Query: 223 --NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ S+ P I E QA A+ E+ V + +V
Sbjct: 63 FDDDSEFLPEIRE-------------------------------QANLALAEASVAVVIV 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ G+TAADE IA+WLR + + ++L VNKCESP +G+ ++FW LG P PISAI
Sbjct: 92 DGQQGVTAADESIAEWLRGHNVP--VLLGVNKCESPDQGLAMAADFWGLGLGEPHPISAI 149
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG+LLD V S L T +E +AI+GRPNVGKSS+LNA+ GE+R IV
Sbjct: 150 HGAGTGDLLDRVISFLPATTET-----DEAEPIQLAIIGRPNVGKSSLLNAICGENRAIV 204
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SPI GTTRD IDT EG ++LIDTAGIR+R ++ E + R+F+AI RSD
Sbjct: 205 SPIRGTTRDTIDTTLE-REGLTWKLIDTAGIRRRRSVDYG---PEYFGITRSFKAIERSD 260
Query: 460 VVALVIEAMACITEQ 474
V LVI+A+ +TEQ
Sbjct: 261 VCILVIDALDGVTEQ 275
>gi|124025156|ref|YP_001014272.1| GTP-binding protein EngA [Prochlorococcus marinus str. NATL1A]
gi|166225837|sp|A2C0J7.1|DER_PROM1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123960224|gb|ABM75007.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str.
NATL1A]
Length = 456
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 146/315 (46%), Positives = 191/315 (60%), Gaps = 44/315 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLCQSREAIVHDEPGVTRDRTYQDGFWRDRDFKVVDTGGLV 62
Query: 223 --NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ S+ P I E QA A+EE+ V + +V
Sbjct: 63 FDDDSEFLPEIRE-------------------------------QANLALEEAVVALVIV 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ G+T ADE IA++LR ++ VNKCESP +G+ +EFW LG P PISAI
Sbjct: 92 DGQEGITTADESIAEFLRSRSCKTLVV--VNKCESPEQGLAMAAEFWKLGLGEPYPISAI 149
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG+LLD V + ++DL E + +AI+GRPNVGKSS+LN++ GE R IV
Sbjct: 150 HGVGTGDLLDQVVNLFP----SKDLDEVSDSPVQLAIIGRPNVGKSSLLNSICGETRAIV 205
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S I GTTRD IDT T +G++++L+DTAGIR+R ++ E +NR+F+AI RSD
Sbjct: 206 SSIRGTTRDTIDTRIT-HQGKEWKLVDTAGIRRRRSVNYG---PEFFGINRSFKAIERSD 261
Query: 460 VVALVIEAMACITEQ 474
V LVI+A+ +TEQ
Sbjct: 262 VCVLVIDALDGVTEQ 276
>gi|86608739|ref|YP_477501.1| GTP-binding protein EngA [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123502588|sp|Q2JM09.1|DER_SYNJB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|86557281|gb|ABD02238.1| GTP-binding protein EngA [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 459
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 157/313 (50%), Positives = 196/313 (62%), Gaps = 39/313 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NR+ G AIV DEPGVTRDR+Y W +VDTGG++
Sbjct: 3 LPLVAIVGRPNVGKSTLVNRMAGVRSAIVHDEPGVTRDRLYQEVEWNGRRLRVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +P I +QA AA+ E+ +IF+VDG
Sbjct: 63 FGDDS----------------EFLP-------------HIRQQAMAAMAEAQAVIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ GLT AD E+ADWLRK + +++AVNKCES + G+ Q + FW LG P+P S I G
Sbjct: 94 REGLTPADVEVADWLRKQPLP--VVVAVNKCESGQMGLAQAAAFWELGLGDPIPCSGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G ELL+ V + L +V T + E + I A++IVGRPNVGKSS+LN LVG +R IVSP
Sbjct: 152 NGVAELLEAVLAHLPEV--TAEAAGEPDPI-AVSIVGRPNVGKSSLLNRLVGSERAIVSP 208
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT T EGQ +RLIDTAGIRK+ + E S+NRAF+AI+RSD V
Sbjct: 209 ISGTTRDAIDTVVTW-EGQPYRLIDTAGIRKKNRVQYG---IEFFSINRAFKAIQRSDAV 264
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 265 LLVIDALEGVTEQ 277
>gi|78184221|ref|YP_376656.1| GTP-binding protein EngA [Synechococcus sp. CC9902]
gi|123581907|sp|Q3AZ65.1|DER_SYNS9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|78168515|gb|ABB25612.1| Small GTP-binding protein domain [Synechococcus sp. CC9902]
Length = 455
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 151/316 (47%), Positives = 193/316 (61%), Gaps = 48/316 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA A++E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALDEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GLTAADE IA++LR+ +LAVNKCES +G+ +EFWSLG P PISAI
Sbjct: 93 GKQGLTAADESIAEFLRQQRCP--TLLAVNKCESVEQGLAMAAEFWSLGLGEPYPISAIH 150
Query: 341 GTGTGELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GT E+LD V + L K EG +EE I ++I+GRPNVGKSS+LNA+ GE R I
Sbjct: 151 GAGTAEVLDQVLTFLPPKDQEG-----DEEEPI-QMSIIGRPNVGKSSLLNAICGEQRAI 204
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VSPI GTTRD IDT E + +RL+DTAGIR+R ++ E +NR+F+AI RS
Sbjct: 205 VSPIRGTTRDTIDTNIV-RENRPWRLVDTAGIRRRRSVNYG---PEYFGINRSFKAIERS 260
Query: 459 DVVALVIEAMACITEQ 474
DV LVI+A+ +TEQ
Sbjct: 261 DVCVLVIDALDGVTEQ 276
>gi|116071134|ref|ZP_01468403.1| GTP-binding protein EngA [Synechococcus sp. BL107]
gi|116066539|gb|EAU72296.1| GTP-binding protein EngA [Synechococcus sp. BL107]
Length = 455
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 151/316 (47%), Positives = 193/316 (61%), Gaps = 48/316 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA A++E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALDEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GLTAADE IA++LR+ +LAVNKCES +G+ +EFWSLG P PISAI
Sbjct: 93 GKQGLTAADESIAEFLRQQRCP--TLLAVNKCESVEQGLAMAAEFWSLGLGEPYPISAIH 150
Query: 341 GTGTGELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GT E+LD V + L K EG +EE I ++I+GRPNVGKSS+LNA+ GE R I
Sbjct: 151 GAGTAEVLDKVLTFLPPKDQEG-----DEEEPI-QMSIIGRPNVGKSSLLNAICGEQRAI 204
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VSPI GTTRD IDT E + +RL+DTAGIR+R ++ E +NR+F+AI RS
Sbjct: 205 VSPIRGTTRDTIDTNIV-RENRPWRLVDTAGIRRRRSVNYG---PEYFGINRSFKAIERS 260
Query: 459 DVVALVIEAMACITEQ 474
DV LVI+A+ +TEQ
Sbjct: 261 DVCVLVIDALDGVTEQ 276
>gi|72383562|ref|YP_292917.1| GTP-binding protein EngA [Prochlorococcus marinus str. NATL2A]
gi|123620367|sp|Q46H20.1|DER_PROMT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|72003412|gb|AAZ59214.1| Small GTP-binding protein protein domain:GTP-binding protein
[Prochlorococcus marinus str. NATL2A]
Length = 456
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 145/315 (46%), Positives = 191/315 (60%), Gaps = 44/315 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLCQSREAIVHDEPGVTRDRTYQDGFWRDRDFKVVDTGGLV 62
Query: 223 --NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ S+ P I E QA A+EE+ V + +V
Sbjct: 63 FDDDSEFLPEIRE-------------------------------QANLALEEAVVALVIV 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ G+T ADE IA++LR ++ VNKCESP +G+ ++FW LG P PISAI
Sbjct: 92 DGQEGITTADESIAEFLRSRSGKTLVV--VNKCESPEQGLAMAAQFWKLGLGEPYPISAI 149
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG+LLD V + ++DL E + +AI+GRPNVGKSS+LN++ GE R IV
Sbjct: 150 HGVGTGDLLDQVVNLFP----SKDLDEVSDSPVQLAIIGRPNVGKSSLLNSICGETRAIV 205
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S I GTTRD IDT T +G++++L+DTAGIR+R ++ E +NR+F+AI RSD
Sbjct: 206 SSIRGTTRDTIDTRIT-HQGKEWKLVDTAGIRRRRSVNYG---PEFFGINRSFKAIERSD 261
Query: 460 VVALVIEAMACITEQ 474
V LVI+A+ +TEQ
Sbjct: 262 VCVLVIDALDGVTEQ 276
>gi|123965688|ref|YP_001010769.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9515]
gi|166225838|sp|A2BV51.1|DER_PROM5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123200054|gb|ABM71662.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str.
MIT 9515]
Length = 458
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 147/313 (46%), Positives = 191/313 (61%), Gaps = 40/313 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 3 LPSIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ ED + E +P I Q A+EE+ + +F+VDG
Sbjct: 62 --------VFEDDS-------EFLP-------------EIRTQVFLALEEASIALFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+T D IA WLR + D I+AVNKCES GI SEFW LG P P+SAI G
Sbjct: 94 NQGVTTGDLSIAKWLRNS--DCKTIVAVNKCESLSLGISMASEFWKLGLGEPYPVSAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG+LLDLV EL K ED +E+++ ++I+GRPNVGKSS+LNA+ GE R IVS
Sbjct: 152 SGTGDLLDLVIDELPKDFDVED---KEDKV-MMSIIGRPNVGKSSLLNAICGEKRAIVSD 207
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTT D+IDT ++++DTAGIR++ + TE +NRAF++I RSDV
Sbjct: 208 ISGTTTDSIDT-LIKKNSHLWKIVDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDVC 263
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 264 VLVIDAIDGVTDQ 276
>gi|409386074|ref|ZP_11238548.1| GTP-binding protein EngA [Lactococcus raffinolactis 4877]
gi|399206628|emb|CCK19463.1| GTP-binding protein EngA [Lactococcus raffinolactis 4877]
Length = 436
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 148/313 (47%), Positives = 193/313 (61%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y S W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYTTSEWLNKKFAMIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
E A + I+ QA A++E+ VI+F+VDG
Sbjct: 62 -----------------------------EMADTPFMAQIKAQAEIAMDEADVIVFVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K D +IL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ENGVTDADEYVAQILYKT--DTPVILVVNKIDNPERR-MEIFDFYSLGLGEPYPVSAVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L VE EEEN I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAIIDNLP-VE-----TEEENPDIIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI+GTTRDAIDT FT EGQ+F +IDTAG+RKR + TTE SV RA RAI RSDV
Sbjct: 204 PIAGTTRDAIDTNFTDAEGQEFTMIDTAGMRKRGKVY---ETTEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +V+ A I E
Sbjct: 261 VLMVLNAEEGIRE 273
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 39/199 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTNFTDAEGQEFTMIDTAGM-- 233
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + + E T + +V R A AI+ S V++ +++ +
Sbjct: 234 --RKRGKVYE---------------TTEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + + II+ NK ++ K + EF L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGRGIIIVANKWDAIEKDNKTLQKWEEKIRDEFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLVCS 353
+SA + +L DL+ S
Sbjct: 327 FVSAETKQRLNKLPDLIKS 345
>gi|254423770|ref|ZP_05037488.1| GTPase, putative [Synechococcus sp. PCC 7335]
gi|196191259|gb|EDX86223.1| GTPase, putative [Synechococcus sp. PCC 7335]
Length = 449
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 141/300 (47%), Positives = 185/300 (61%), Gaps = 43/300 (14%)
Query: 179 LFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAIT 238
L NR GG ++IV D+PGVTRDR Y +FW + EF+ VDTGG+ + +D
Sbjct: 2 LVNRFAGGRQSIVFDQPGVTRDRTYQPAFWKDREFLAVDTGGL---------VFDD---- 48
Query: 239 TTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLR 298
E +P I QA A+ E+ +F+VDGQ G T D+EIA W+R
Sbjct: 49 ---DTEFLP-------------YIREQAMTALSEAAAALFVVDGQIGPTEGDQEIASWMR 92
Query: 299 KNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKK 357
+ ++LAVNKCESP +GI+Q ++FW LG P +SAI G+GTGELLD + L
Sbjct: 93 SQNIP--VVLAVNKCESPDEGIIQAAQFWELGLGEPYAVSAIHGSGTGELLDALVEHLPP 150
Query: 358 VEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFT-- 415
+ E + E +AIVGRPNVGKSSILNA VGE+R+IVSPISGTTRDAID T
Sbjct: 151 ADQIETVDEYR-----VAIVGRPNVGKSSILNAFVGENRSIVSPISGTTRDAIDMVVTRG 205
Query: 416 -GPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQ 474
G + +++RLIDTAGIRK+ + E +NRAF+AI+R+DVV LVI+A+ +TEQ
Sbjct: 206 DGDDQKRYRLIDTAGIRKKKNVDFG---PEYFGINRAFKAIKRADVVLLVIDALDGVTEQ 262
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 52/215 (24%)
Query: 160 EHLLP----------RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG 209
EHL P RVAIVGRPNVGKS++ N VG NR+IV G TRD + G
Sbjct: 146 EHLPPADQIETVDEYRVAIVGRPNVGKSSILNAFVGENRSIVSPISGTTRDAIDMVVTRG 205
Query: 210 ----EHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQ 265
+ + L+DT G+ + + N+ G E + +
Sbjct: 206 DGDDQKRYRLIDTAGI----RKKKNV--------DFGPEYFGI---------------NR 238
Query: 266 ATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE 325
A AI+ + V++ ++D G+T D+++A + + + ++ VNK ++ K + E
Sbjct: 239 AFKAIKRADVVLLVIDALDGVTEQDQKLAGRIEEE--GRACVIVVNKWDAIDKDSHTIYE 296
Query: 326 F--------WSLGFSP-LPISAISGTGTGELLDLV 351
F LG++ L +SA++G ++LD V
Sbjct: 297 FDKKIEAKIHFLGWAKRLYVSALTGQRLPKILDAV 331
>gi|138895798|ref|YP_001126251.1| GTP-binding protein EngA [Geobacillus thermodenitrificans NG80-2]
gi|196248680|ref|ZP_03147380.1| small GTP-binding protein [Geobacillus sp. G11MC16]
gi|166198718|sp|A4IQA2.1|DER_GEOTN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|134267311|gb|ABO67506.1| GTP-binding protein-like protein [Geobacillus thermodenitrificans
NG80-2]
gi|196211556|gb|EDY06315.1| small GTP-binding protein [Geobacillus sp. G11MC16]
Length = 436
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 194/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W H F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERISIVEDVPGVTRDRIYSSAEWLNHSFYLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E PL + I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PLLVQ----------IRQQAEIAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A LR++ +K ++LAVNK ++P + + +F++LGF P PIS GT
Sbjct: 94 DGVTAADEEVAKLLRRS--NKPVVLAVNKIDNPEMRDL-IYDFYALGFGEPYPISGAHGT 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K G E E + ++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GLGDLLDAVARHFPKDHGQE----YEEDVIKFCLIGRPNVGKSSLVNAILGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT F EGQK+ +IDTAG+RKR I S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDTSFV-REGQKYVIIDTAGMRKRGKIYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIIEQ 274
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 40/197 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ ++GRPNVGKS+L N ++G R IV D G TRD + SF E +++++DT G+
Sbjct: 177 KFCLIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAV-DTSFVREGQKYVIIDTAGM-- 233
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E +T + +V R A AIE S V++ +++ +
Sbjct: 234 --RKRGKIYE---------------STEKYSVLR--------ALRAIERSDVVLVVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-L 334
G+ D++IA + + + +IL VNK ++ K + EF L ++P L
Sbjct: 269 EGIIEQDKKIAGYAHE--AGRGVILVVNKWDAVEKDDKTMVEFERKIRDHFPFLDYAPIL 326
Query: 335 PISAISGTGTGELLDLV 351
+SA + +LL LV
Sbjct: 327 FVSAKTKQRLHKLLPLV 343
>gi|383762669|ref|YP_005441651.1| GTPase Der [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381382937|dbj|BAL99753.1| GTPase Der [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 456
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/312 (50%), Positives = 195/312 (62%), Gaps = 28/312 (8%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL+G AIV DEPG TRDR+YG S W F+++DTGG+
Sbjct: 6 PVVALVGRPNVGKSTLFNRLIGRPVAIVEDEPGTTRDRIYGESDWNGVGFIVIDTGGL-- 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
P M T EG T E+ VA ++ QA AI+E+ II +VDG+
Sbjct: 64 ---EAPETMR------TRHSEGAQ-TTSESLVAS----VQNQAQLAIDEADAIIMIVDGR 109
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+GLTAADEEIA LR++ +K + LAVNK ES ++ EFW+LG P PISA G
Sbjct: 110 SGLTAADEEIASVLRQS--NKPVFLAVNKAES-QEVRQNAVEFWALGLGEPYPISAYHGD 166
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD E+ KV EEE +AIVGRPNVGKSS+LNALVG++R+IVS +
Sbjct: 167 GVGDLLD----EVVKVLPAYPAEEEEKETIGVAIVGRPNVGKSSLLNALVGQERSIVSAV 222
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD ID E T EGQ+ LIDTAGIR+R I E SV R+ RAI RSDV
Sbjct: 223 PGTTRDPIDMEITC-EGQRITLIDTAGIRRRGRIEQG---IEQYSVLRSMRAIDRSDVAL 278
Query: 463 LVIEAMACITEQ 474
L+I+A +T Q
Sbjct: 279 LLIDAQEGVTAQ 290
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 92/200 (46%), Gaps = 44/200 (22%)
Query: 148 QKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSF 207
+++ K TIG VAIVGRPNVGKS+L N LVG R+IV PG TRD +
Sbjct: 185 EEEEKETIG---------VAIVGRPNVGKSSLLNALVGQERSIVSAVPGTTRDPIDMEIT 235
Query: 208 WGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQAT 267
L+DT G+ + + I + +V R +
Sbjct: 236 CEGQRITLIDTAGIRRRGRIEQGI-------------------EQYSVLR--------SM 268
Query: 268 AAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW 327
AI+ S V + L+D Q G+TA D IA ++ + Y K +++ VNK ++ K + E+
Sbjct: 269 RAIDRSDVALLLIDAQEGVTAQDTHIAGYVLERY--KSVVVVVNKWDAVEKDSHTMVEYT 326
Query: 328 S-----LGFSP-LPISAISG 341
+ L F P +P+ IS
Sbjct: 327 NAVREQLNFMPYVPVLFISA 346
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 9/112 (8%)
Query: 369 NRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTA 428
+R P +A+VGRPNVGKS++ N L+G IV GTTRD I E + G F +IDT
Sbjct: 3 DRKPVVALVGRPNVGKSTLFNRLIGRPVAIVEDEPGTTRDRIYGE-SDWNGVGFIVIDTG 61
Query: 429 GIRKRAAIASSGS-----TTEALSV---NRAFRAIRRSDVVALVIEAMACIT 472
G+ + + S T+E+L N+A AI +D + ++++ + +T
Sbjct: 62 GLEAPETMRTRHSEGAQTTSESLVASVQNQAQLAIDEADAIIMIVDGRSGLT 113
>gi|159902929|ref|YP_001550273.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9211]
gi|226706248|sp|A9BE09.1|DER_PROM4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|159888105|gb|ABX08319.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str.
MIT 9211]
Length = 456
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 193/312 (61%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL G AIV D+PGVTRDR Y +FW + EF +VDTGG++
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLCGSREAIVDDQPGVTRDRTYQDAFWADREFKVVDTGGLVF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+S E +P I +QA A+ E+ V + +VDGQ
Sbjct: 64 DDES----------------EFLP-------------EIRQQAKLALSEASVALIVVDGQ 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T AD+EIA WLR + + ++AVNKCESP +G+ ++FWSLG P P+SAI G+
Sbjct: 95 EGVTTADKEIASWLR--HCECPTLVAVNKCESPEQGLAMAADFWSLGLGEPYPVSAIHGS 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTGELLD V L E +E+ E +AI+GRPNVGKSS+LN++ GE R IVS I
Sbjct: 153 GTGELLDQVILLLPSKESSEEEDEPIQ----LAIIGRPNVGKSSLLNSICGETRAIVSSI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD IDT E Q ++LIDTAGIR+R +++ E +NR+ +AI RSDV
Sbjct: 209 RGTTRDTIDT-LLKREQQAWKLIDTAGIRRRRSVSYG---PEYFGINRSLKAIERSDVCL 264
Query: 463 LVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 265 LVIDALDGVTEQ 276
>gi|56420756|ref|YP_148074.1| GTP-binding protein EngA [Geobacillus kaustophilus HTA426]
gi|375009278|ref|YP_004982911.1| GTP-binding protein engA [Geobacillus thermoleovorans CCB_US3_UF5]
gi|81819681|sp|Q5KXT0.1|DER_GEOKA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|56380598|dbj|BAD76506.1| GTP-binding protein [Geobacillus kaustophilus HTA426]
gi|359288127|gb|AEV19811.1| GTP-binding protein engA [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 436
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 195/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y R+ W H F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERISIVEDVPGVTRDRIYSRAEWLNHSFYLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E PL + I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PLLVQ----------IRQQAEIAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A LR++ +K ++LAVNK ++P + + +F++LGF P PIS GT
Sbjct: 94 DGVTAADEEVAKLLRRS--NKPVVLAVNKIDNPEMRDL-IYDFYALGFGEPYPISGAHGT 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K G E E + ++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GLGDLLDAVVRHFPKGGGQE----YEEDVIKFCLIGRPNVGKSSLVNAILGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT F EGQ++ +IDTAG+RKR I S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDTSFV-REGQEYVIIDTAGMRKRGKIYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIIEQ 274
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 40/197 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ ++GRPNVGKS+L N ++G R IV D G TRD + SF E E++++DT G+
Sbjct: 177 KFCLIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAV-DTSFVREGQEYVIIDTAGM-- 233
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E +T + +V R A AIE S V++ +++ +
Sbjct: 234 --RKRGKIYE---------------STEKYSVLR--------ALRAIERSDVVLVVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-L 334
G+ D++IA + + + +IL VNK ++ K + EF L ++P L
Sbjct: 269 EGIIEQDKKIAGYAHE--AGRGVILIVNKWDAIEKDDKTMVEFERKIRDHFPFLDYAPIL 326
Query: 335 PISAISGTGTGELLDLV 351
+SA + +LL LV
Sbjct: 327 FVSAKTKQRLHKLLPLV 343
>gi|261417942|ref|YP_003251624.1| GTP-binding protein EngA [Geobacillus sp. Y412MC61]
gi|297529610|ref|YP_003670885.1| ribosome-associated GTPase EngA [Geobacillus sp. C56-T3]
gi|319767246|ref|YP_004132747.1| ribosome-associated GTPase EngA [Geobacillus sp. Y412MC52]
gi|448238513|ref|YP_007402571.1| ribosome associated GTP-binding protein [Geobacillus sp. GHH01]
gi|261374399|gb|ACX77142.1| ribosome-associated GTPase EngA [Geobacillus sp. Y412MC61]
gi|297252862|gb|ADI26308.1| ribosome-associated GTPase EngA [Geobacillus sp. C56-T3]
gi|317112112|gb|ADU94604.1| ribosome-associated GTPase EngA [Geobacillus sp. Y412MC52]
gi|445207355|gb|AGE22820.1| ribosome associated GTP-binding protein [Geobacillus sp. GHH01]
Length = 436
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 195/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y R+ W H F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERISIVEDVPGVTRDRIYSRAEWLNHSFYLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E PL + I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PLLVQ----------IRQQAEIAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A LR++ +K ++LAVNK ++P + + +F++LGF P PIS GT
Sbjct: 94 DGVTAADEEVAKLLRRS--NKPVVLAVNKIDNPEMRDL-IYDFYALGFGEPYPISGAHGT 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K G E E + ++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GLGDLLDAVVRHFPKGGGQE----YEEDVIKFCLIGRPNVGKSSLVNAILGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT F EGQ++ +IDTAG+RKR I S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDTSFV-REGQEYVIIDTAGMRKRGKIYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIIEQ 274
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 40/197 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ ++GRPNVGKS+L N ++G R IV D G TRD + SF E E++++DT G+
Sbjct: 177 KFCLIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAV-DTSFVREGQEYVIIDTAGM-- 233
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E +T + +V R A AIE S V++ +++ +
Sbjct: 234 --RKRGKIYE---------------STEKYSVLR--------ALRAIERSDVVLVVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-L 334
G+ D++IA + + + +IL VNK ++ K + EF L ++P L
Sbjct: 269 EGIIEQDKKIAGYAHE--AGRGVILVVNKWDAIEKDDKTMVEFERKIRDHFPFLDYAPIL 326
Query: 335 PISAISGTGTGELLDLV 351
+SA + +LL LV
Sbjct: 327 FVSAKTKQRLHKLLPLV 343
>gi|78778772|ref|YP_396884.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9312]
gi|123554591|sp|Q31CE7.1|DER_PROM9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|78712271|gb|ABB49448.1| Small GTP-binding protein domain [Prochlorococcus marinus str. MIT
9312]
Length = 457
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 190/314 (60%), Gaps = 41/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------EIRAQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCKT--IIAVNKCESTTLGISLASEFWKLGLGEPYPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G+GTG+LLDLV EL E+ ++EE ++I+GRPNVGKSS+LN++ GE R IVS
Sbjct: 151 GSGTGDLLDLVIGEL-----PENNIQEEEEKIMMSIIGRPNVGKSSLLNSISGEKRAIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
ISGTT D+IDT + Q ++++DTAGIR++ + TE +NRAF++I RSDV
Sbjct: 206 DISGTTTDSIDTLIKKGDTQ-WKIVDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDV 261
Query: 461 VALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 262 CVLVIDAIDGVTDQ 275
>gi|347521264|ref|YP_004778835.1| GTP-binding protein [Lactococcus garvieae ATCC 49156]
gi|385832647|ref|YP_005870422.1| GTP-binding protein [Lactococcus garvieae Lg2]
gi|343179832|dbj|BAK58171.1| GTP-binding protein [Lactococcus garvieae ATCC 49156]
gi|343181800|dbj|BAK60138.1| GTP-binding protein [Lactococcus garvieae Lg2]
Length = 436
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/313 (46%), Positives = 191/313 (61%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F L+DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLNKKFSLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T+ I QA A+EE+ VI+ +VDG
Sbjct: 61 ------------------IELSDEPFMTQ----------IRAQAEIAMEEADVIVAVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + DK IIL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADEHVAQILYRT--DKPIILVVNKVDNPERR-MEIFDFYSLGLGEPYPVSAVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L TE EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 LGTGDVLDAIIENLP----TE--TEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT EGQ+F +IDTAG+RK I + TE SV RA RAI RSD+
Sbjct: 204 PVAGTTRDAIDTSFTDAEGQEFLMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDI 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|420143869|ref|ZP_14651357.1| GTPase Der [Lactococcus garvieae IPLA 31405]
gi|391855321|gb|EIT65870.1| GTPase Der [Lactococcus garvieae IPLA 31405]
Length = 436
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 146/313 (46%), Positives = 191/313 (61%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F L+DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLNKKFSLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T+ I QA A+EE+ VI+ +VDG
Sbjct: 61 ------------------IELSDEPFMTQ----------IRAQAEIAMEEADVIVAVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + DK +IL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADEHVAQILYRT--DKPVILVVNKVDNPERR-MEIFDFYSLGLGEPYPVSAVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L TE EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 LGTGDVLDAIIENLP----TE--TEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT EGQ+F +IDTAG+RK I + TE SV RA RAI RSD+
Sbjct: 204 PVAGTTRDAIDTSFTDAEGQEFLMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDI 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|239827511|ref|YP_002950135.1| GTP-binding protein EngA [Geobacillus sp. WCH70]
gi|259645879|sp|C5D3F4.1|DER_GEOSW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|239807804|gb|ACS24869.1| small GTP-binding protein [Geobacillus sp. WCH70]
Length = 436
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 149/312 (47%), Positives = 196/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W H+F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERISIVEDVPGVTRDRIYSSAEWLNHKFYLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E PL + I +QA AI+E+ VIIF+V+G+
Sbjct: 62 ----------------DIGDE--PLLVQ----------IRQQAEIAIDEADVIIFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ +K ++LAVNK ++P + + +F++LGF P PIS GT
Sbjct: 94 DGVTAADEEVAKILHRS--NKPVVLAVNKIDNPEMRDL-IYDFYALGFGDPYPISGSHGT 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K G E E E + ++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GLGDLLDAVARHFPK-RGQE---EYEEDVIKFCLIGRPNVGKSSLVNAILGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT F EGQ++ +IDTAG+RKR I S TE SV RA +AI RSDVV
Sbjct: 207 AGTTRDAVDTTFV-REGQEYVIIDTAGMRKRGKIYES---TEKYSVLRALKAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIIEQ 274
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ ++GRPNVGKS+L N ++G R IV D G TRD + E++++DT G+
Sbjct: 177 KFCLIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAVDTTFVREGQEYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + I E +T + +V R A AIE S V++ +++ +
Sbjct: 234 -RKRGKIYE---------------STEKYSVLR--------ALKAIERSDVVLVVLNAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D++IA + + + +I+ VNK ++ K + EF
Sbjct: 270 GIIEQDKKIAGYAHE--AGRGVIIVVNKWDAIEKDDKTLIEF 309
>gi|421766743|ref|ZP_16203512.1| GTP-binding protein EngA [Lactococcus garvieae DCC43]
gi|407624769|gb|EKF51502.1| GTP-binding protein EngA [Lactococcus garvieae DCC43]
Length = 436
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 146/313 (46%), Positives = 191/313 (61%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F L+DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLNKKFSLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T+ I QA A+EE+ VI+ +VDG
Sbjct: 61 ------------------IELSDEPFMTQ----------IRAQAEIAMEEADVIVAVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + DK IIL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADENVAQILYRT--DKPIILVVNKVDNPERR-MEIFDFYSLGLGEPYPVSAVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L +E EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 LGTGDVLDAIIENLP-IE-----TEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT EGQ+F +IDTAG+RK I + TE SV RA RAI RSD+
Sbjct: 204 PVAGTTRDAIDTSFTDAEGQEFLMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDI 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|33860948|ref|NP_892509.1| GTP-binding protein EngA [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|41017012|sp|Q7V2S6.1|DER_PROMP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|33639680|emb|CAE18850.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 458
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 143/313 (45%), Positives = 188/313 (60%), Gaps = 40/313 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + W EF +VDTGG+
Sbjct: 3 LPSIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWAGREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ ED + E +P I Q A+EE+ + +F+VDG
Sbjct: 62 --------VFEDDS-------EFLP-------------EIRTQVFLALEEASLALFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+T D IA WLR + I+AVNKCES G+ SEFW LG P P+SAI G
Sbjct: 94 NQGVTDGDLSIAKWLRNSACK--TIVAVNKCESTSLGVSLASEFWKLGLGEPYPVSAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG+LLDLV K ED +E++I ++I+GRPNVGKSS+LNA+ GE R IVS
Sbjct: 152 SGTGDLLDLVIDGFPKDLNVED---KEDKI-MMSIIGRPNVGKSSLLNAICGEKRAIVSD 207
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTT D+IDT + ++++DTAGIR++ + TE +NRAF++I RSDV
Sbjct: 208 ISGTTTDSIDT-LIKKDSHLWKIVDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDVC 263
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 264 VLVIDAIDGVTDQ 276
>gi|390453458|ref|ZP_10238986.1| GTP-binding protein Der [Paenibacillus peoriae KCTC 3763]
Length = 440
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 197/312 (63%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR++G +IV D+PG+TRDR+YG S W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIIGDRLSIVEDKPGITRDRIYGISEWNGKSFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I E I L + I QA AIEE+ VI+F+ D +
Sbjct: 62 ----------------EIDGEDIILKS-----------IRMQAELAIEEADVIVFMSDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+T +DEE+A L ++ K II+AVNK ++ + + + EF+S GF P+P+S GT
Sbjct: 95 AGITQSDEEVAQMLYRS--GKPIIVAVNKVDNLNRADL-IYEFYSYGFGDPIPVSGSHGT 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + S L ++E E+ +E+ + +A++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 152 GIGDLLDAITSNLPELE--EEHYDED--VIRVALIGRPNVGKSSLVNAILGEERVIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F +GQK+ LIDTAG+RKR + TTE SV RA RAI R+DVV
Sbjct: 208 AGTTRDAIDTPFE-KDGQKYVLIDTAGMRKRGKVY---ETTEKYSVMRAMRAIERADVVL 263
Query: 463 LVIEAMACITEQ 474
+VI I EQ
Sbjct: 264 VVINGEEGIIEQ 275
>gi|91069954|gb|ABE10882.1| GTP-binding protein [uncultured Prochlorococcus marinus clone
ASNC2259]
Length = 457
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 189/314 (60%), Gaps = 41/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EES + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------EIRTQVFLALEESSLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P+P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCKT--IVAVNKCESTTLGISLASEFWKLGLGEPIPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G+GTG+LLDLV EL E+ ++++ ++I+GRPNVGKSS+LN++ GE R IVS
Sbjct: 151 GSGTGDLLDLVICEL-----PENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKRAIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
ISGTT D+IDT + +++IDTAGIR++ + E +NRAF++I RSDV
Sbjct: 206 DISGTTTDSIDTLIKKGDNH-WKIIDTAGIRRKKNVKYGA---EFFGINRAFKSIDRSDV 261
Query: 461 VALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 262 CVLVIDAVDGVTDQ 275
>gi|91069816|gb|ABE10748.1| GTP-binding protein [uncultured Prochlorococcus marinus clone
ASNC1092]
Length = 457
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 189/314 (60%), Gaps = 41/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------QIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCKT--IVAVNKCESTTLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G+GTG+LLDLV EL E+ ++++ ++I+GRPNVGKSS+LN++ GE R IVS
Sbjct: 151 GSGTGDLLDLVIGEL-----PENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKRAIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
ISGTT D+IDT + +++IDTAGIR++ + TE +NRAF++I RSDV
Sbjct: 206 DISGTTTDSIDTLIKKGDNH-WKIIDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDV 261
Query: 461 VALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 262 CVLVIDAIDGVTDQ 275
>gi|418961420|ref|ZP_13513306.1| GTP-binding protein Der [Lactobacillus salivarius SMXD51]
gi|380343952|gb|EIA32299.1| GTP-binding protein Der [Lactobacillus salivarius SMXD51]
Length = 436
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 188/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNRL G +IV D PGVTRDR+Y R+ W H F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRLAGERISIVEDTPGVTRDRIYARTEWLGHPFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I QA AIEE+ VIIF+V +
Sbjct: 62 ----------------DIGDE--PFLTQ----------ITEQAEIAIEEADVIIFVVSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L + DK ++LAVNK ++P + +F+SLGF P+P++ G
Sbjct: 94 EGVTDADEKVARILYRT--DKPVVLAVNKVDNPELR-ADIYDFYSLGFGEPIPVAGTHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD + E K D EE+ + +GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GTGDLLDKIIKEFPK-----DATNEEDDSIKFSFIGRPNVGKSSLVNAILGENRVIVSNI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F +G K+ +IDTAGIRK+ + + TE SV RA RAI RSDVV
Sbjct: 206 EGTTRDAIDTRFETEDGTKYTMIDTAGIRKKGKVYEN---TEKYSVLRAMRAIDRSDVVC 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIREQ 274
>gi|90961863|ref|YP_535779.1| GTP-binding protein EngA [Lactobacillus salivarius UCC118]
gi|227890889|ref|ZP_04008694.1| GTP-binding protein EngA [Lactobacillus salivarius ATCC 11741]
gi|385840472|ref|YP_005863796.1| GTP-binding protein engA [Lactobacillus salivarius CECT 5713]
gi|417788385|ref|ZP_12436068.1| GTP-binding protein EngA [Lactobacillus salivarius NIAS840]
gi|417810233|ref|ZP_12456912.1| GTP-binding protein EngA [Lactobacillus salivarius GJ-24]
gi|122448999|sp|Q1WTQ4.1|DER_LACS1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|90821057|gb|ABD99696.1| GTP-binding protein [Lactobacillus salivarius UCC118]
gi|227867298|gb|EEJ74719.1| GTP-binding protein EngA [Lactobacillus salivarius ATCC 11741]
gi|300214593|gb|ADJ79009.1| GTP-binding protein engA [Lactobacillus salivarius CECT 5713]
gi|334308562|gb|EGL99548.1| GTP-binding protein EngA [Lactobacillus salivarius NIAS840]
gi|335349029|gb|EGM50529.1| GTP-binding protein EngA [Lactobacillus salivarius GJ-24]
Length = 436
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 188/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNRL G +IV D PGVTRDR+Y R+ W H F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRLAGERISIVEDTPGVTRDRIYARTEWLGHPFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I QA AIEE+ VIIF+V +
Sbjct: 62 ----------------DIGDE--PFLTQ----------ITEQAEIAIEEADVIIFVVSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
G+T ADE++A L + DK ++LAVNK ++P + +F+SLGF P+P++ G
Sbjct: 94 EGVTDADEKVARILYRT--DKPVVLAVNKVDNPELR-ADIYDFYSLGFGEPIPVAGTHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD + E K D EE+ + +GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GTGDLLDKIIKEFPK-----DATNEEDDSIKFSFIGRPNVGKSSLVNAILGENRVIVSNI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F +G K+ +IDTAGIRK+ + + TE SV RA RAI RSDVV
Sbjct: 206 EGTTRDAIDTRFETEDGTKYTMIDTAGIRKKGKVYEN---TEKYSVLRAMRAIDRSDVVC 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIREQ 274
>gi|269837313|ref|YP_003319541.1| small GTP-binding protein [Sphaerobacter thermophilus DSM 20745]
gi|269786576|gb|ACZ38719.1| small GTP-binding protein [Sphaerobacter thermophilus DSM 20745]
Length = 445
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 148/313 (47%), Positives = 191/313 (61%), Gaps = 38/313 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPN GKS LFNRLVG RAIV D PG TRDR+Y + WG F +VDTGG+L+
Sbjct: 4 PLVAIVGRPNTGKSTLFNRLVGERRAIVEDLPGTTRDRIYAEASWGGVTFDVVDTGGLLS 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + A+ A + + QA AIE++ VI+F+VDGQ
Sbjct: 64 EQEIE-----------------------RASAAEIAQATQEQAELAIEQADVIVFMVDGQ 100
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS-EFWSLGFS-PLPISAISG 341
AG+TA D E+AD +R+ + ++LAVNK E+ + I + EF+ LG P PISA+ G
Sbjct: 101 AGVTAGDHEVADLIRR--AKRPVLLAVNKAEA--RNIQDAAVEFYELGLGDPYPISALHG 156
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + + L E TE E +P+IAIVGRPNVGKS++LNAL+G+ R IVS
Sbjct: 157 TGVGDLLDAIIAHLP--ETTE---AEREEVPSIAIVGRPNVGKSALLNALLGQSRQIVSS 211
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRDA+DTE T G + L+DTAGIR+ I E SV R+ RA+ R+DV
Sbjct: 212 IPGTTRDAVDTEITW-AGNRVVLVDTAGIRRPGRIERG---IEKYSVLRSTRAVERADVA 267
Query: 462 ALVIEAMACITEQ 474
LVI+A T Q
Sbjct: 268 VLVIDATEPFTAQ 280
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 101/227 (44%), Gaps = 63/227 (27%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P +AIVGRPNVGKSAL N L+G +R IV PG TRD + W + +LVDT G+
Sbjct: 181 VPSIAIVGRPNVGKSALLNALLGQSRQIVSSIPGTTRDAVDTEITWAGNRVVLVDTAGI- 239
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER--------QATAAIEESC 274
R P IER ++T A+E +
Sbjct: 240 ----------------------------------RRPGRIERGIEKYSVLRSTRAVERAD 265
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE-----F 326
V + ++D TA D+ IA + + K II+AVNK E + + + +E F
Sbjct: 266 VAVLVIDATEPFTAQDQAIAGAIAE--AKKGIIVAVNKWDLVEKDHRTMKEFTEKAREAF 323
Query: 327 WSLGFSPLP-ISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIP 372
+ ++P+ ISA++G ++++L + E + RIP
Sbjct: 324 HFISYAPIVFISALTGQRVNQVMELALA---------IFAERQRRIP 361
>gi|301299471|ref|ZP_07205746.1| ribosome-associated GTPase EngA [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300852934|gb|EFK80543.1| ribosome-associated GTPase EngA [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 436
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 188/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNRL G +IV D PGVTRDR+Y R+ W H F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRLAGERISIVEDTPGVTRDRIYARTEWLGHPFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I QA AIEE+ VIIF+V +
Sbjct: 62 ----------------DIGDE--PFLTQ----------ITEQAEIAIEEADVIIFVVSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
G+T ADE++A L + DK ++LAVNK ++P + +F+SLGF P+P++ G
Sbjct: 94 EGVTDADEKVARILYRT--DKPVVLAVNKVDNPELR-ADIYDFYSLGFGEPIPVAGTHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD + E K D EE+ + +GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GTGDLLDKIIKEFPK-----DATNEEDDSIKFSFIGRPNVGKSSLVNAILGENRVIVSNI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F +G K+ +IDTAGIRK+ + + TE SV RA RAI RSDVV
Sbjct: 206 EGTTRDAIDTRFETEDGTKYTMIDTAGIRKKGKVYEN---TEKYSVLRAMRAIDRSDVVC 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEDIREQ 274
>gi|336234898|ref|YP_004587514.1| GTP-binding protein engA [Geobacillus thermoglucosidasius C56-YS93]
gi|335361753|gb|AEH47433.1| GTP-binding protein engA [Geobacillus thermoglucosidasius C56-YS93]
Length = 436
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 147/312 (47%), Positives = 195/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W H+F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERISIVEDVPGVTRDRIYSSAEWLNHKFYLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E PL + I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PLLVQ----------IRQQAEIAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ +K ++LAVNK ++P + + +F++LGF P PIS GT
Sbjct: 94 DGVTAADEEVAKILHRS--NKPVVLAVNKIDNPEMRDL-IYDFYALGFGDPYPISGAHGT 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K G E E E + ++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GLGDLLDAVARHFPK-RGQE---EYEEDVIKFCLIGRPNVGKSSLVNAILGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT F EGQ++ +IDTAG+RKR I + TE SV RA +AI RSDVV
Sbjct: 207 AGTTRDAVDTTFV-REGQEYVIIDTAGMRKRGKIYEN---TEKYSVLRALKAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIIEQ 274
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ ++GRPNVGKS+L N ++G R IV D G TRD + E++++DT G+
Sbjct: 177 KFCLIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAVDTTFVREGQEYVIIDTAGMRKR 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + +V R A AIE S V++ +++ +
Sbjct: 237 GKIYEN-------------------TEKYSVLR--------ALKAIERSDVVLVVLNAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D++IA + + + +I+ VNK ++ K + EF
Sbjct: 270 GIIEQDKKIAGYAHE--AGRGVIIVVNKWDAIEKDDKTLIEF 309
>gi|310642585|ref|YP_003947343.1| GTP-binding protein enga [Paenibacillus polymyxa SC2]
gi|386041647|ref|YP_005960601.1| GTP-binding protein engA [Paenibacillus polymyxa M1]
gi|309247535|gb|ADO57102.1| GTP-binding protein engA [Paenibacillus polymyxa SC2]
gi|343097685|emb|CCC85894.1| GTP-binding protein engA [Paenibacillus polymyxa M1]
Length = 440
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 196/312 (62%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR++G +IV D+PG+TRDR+YG S W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIIGDRLSIVEDKPGITRDRIYGISEWNGKSFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I E + L + I QA AIEE+ VI+F+ D +
Sbjct: 62 ----------------EIDGEDVILKS-----------IRMQAELAIEEADVIVFMSDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+T ADEE+A L ++ K II+AVNK ++ + + + EF+S GF P+ +S GT
Sbjct: 95 AGITQADEEVAQMLYRS--GKPIIVAVNKVDNLSRADL-IYEFYSYGFGDPIAVSGSHGT 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + S L ++E ED +E+ + +A++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 152 GIGDLLDAITSNLPELE--EDHYDED--VIRVALIGRPNVGKSSLVNAILGEERVIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F +GQK+ LIDTAG+RKR + TTE SV RA RAI R+DVV
Sbjct: 208 AGTTRDAIDTPFE-KDGQKYVLIDTAGMRKRGKVY---ETTEKYSVMRAMRAIERADVVL 263
Query: 463 LVIEAMACITEQ 474
+VI I EQ
Sbjct: 264 VVINGEEGIIEQ 275
>gi|312110436|ref|YP_003988752.1| ribosome-associated GTPase EngA [Geobacillus sp. Y4.1MC1]
gi|423719453|ref|ZP_17693635.1| ribosome-associated GTPase engA [Geobacillus thermoglucosidans
TNO-09.020]
gi|311215537|gb|ADP74141.1| ribosome-associated GTPase EngA [Geobacillus sp. Y4.1MC1]
gi|383367545|gb|EID44822.1| ribosome-associated GTPase engA [Geobacillus thermoglucosidans
TNO-09.020]
Length = 436
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 147/312 (47%), Positives = 195/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W H+F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERISIVEDVPGVTRDRIYSSAEWLNHKFYLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E PL + I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PLLVQ----------IRQQAEIAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ +K ++LAVNK ++P + + +F++LGF P PIS GT
Sbjct: 94 DGVTAADEEVAKILHRS--NKPVVLAVNKIDNPEMRDL-IYDFYALGFGDPYPISGAHGT 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K G E E E + ++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GLGDLLDAVARHFPK-RGQE---EYEEDVIKFCLIGRPNVGKSSLVNAILGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT F EGQ++ +IDTAG+RKR I + TE SV RA +AI RSDVV
Sbjct: 207 AGTTRDAVDTTFV-REGQEYVIIDTAGMRKRGKIYEN---TEKYSVLRALKAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIIEQ 274
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ ++GRPNVGKS+L N ++G R IV D G TRD + E++++DT G+
Sbjct: 177 KFCLIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAVDTTFVREGQEYVIIDTAGMRKR 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + +V R A AIE S V++ +++ +
Sbjct: 237 GKIYEN-------------------TEKYSVLR--------ALKAIERSDVVLVVLNAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D++IA + + + +I+ VNK ++ K + EF
Sbjct: 270 GIIEQDKKIAGYAHE--AGRGVIIVVNKWDAIEKDDKTLIEF 309
>gi|123967979|ref|YP_001008837.1| GTP-binding protein EngA [Prochlorococcus marinus str. AS9601]
gi|166225839|sp|A2BPL9.1|DER_PROMS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123198089|gb|ABM69730.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str.
AS9601]
Length = 457
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 188/314 (59%), Gaps = 41/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +S E +P I Q A+EE+ + + +VD
Sbjct: 62 VFDDES----------------EFLP-------------EIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCKT--IVAVNKCESTTLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G+GTG+LLDLV EL E+ ++++ ++I+GRPNVGKSS+LN++ GE R IVS
Sbjct: 151 GSGTGDLLDLVIGEL-----PENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKRAIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
ISGTT D+IDT + +++IDTAGIR++ + TE +NRAF++I RSDV
Sbjct: 206 DISGTTTDSIDTLIKKGD-NNWKIIDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDV 261
Query: 461 VALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 262 CVLVIDAVDGVTDQ 275
>gi|375309055|ref|ZP_09774336.1| GTP-binding protein engA [Paenibacillus sp. Aloe-11]
gi|375078364|gb|EHS56591.1| GTP-binding protein engA [Paenibacillus sp. Aloe-11]
Length = 440
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 197/312 (63%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR++G +IV D+PG+TRDR+YG S W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIIGDRLSIVEDKPGITRDRIYGISEWNGKSFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I E I L + I QA AIEE+ VI+F+ D +
Sbjct: 62 ----------------EIDGEDIILKS-----------IRMQAELAIEEADVIVFMSDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+T +DEE+A L ++ K II+AVNK ++ + + + EF+S GF P+P+S GT
Sbjct: 95 AGITQSDEEVAQMLYRS--GKPIIVAVNKVDNLNRADL-IYEFYSYGFGDPIPVSGSHGT 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + S L ++E E+ +++ + +A++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 152 GIGDLLDAITSNLPELE--EEHYDDD--VIRVALIGRPNVGKSSLVNAILGEERVIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F +GQK+ LIDTAG+RKR + TTE SV RA RAI R+DVV
Sbjct: 208 AGTTRDAIDTPFE-KDGQKYVLIDTAGMRKRGKVY---ETTEKYSVMRAMRAIERADVVL 263
Query: 463 LVIEAMACITEQ 474
+VI I EQ
Sbjct: 264 VVINGEEGIIEQ 275
>gi|126695749|ref|YP_001090635.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9301]
gi|166225836|sp|A3PBA9.1|DER_PROM0 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|126542792|gb|ABO17034.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str.
MIT 9301]
Length = 457
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 189/314 (60%), Gaps = 41/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------EIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCKT--IVAVNKCESTTLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G+GTG+LLDLV EL E+ ++++ ++I+GRPNVGKSS+LN++ GE R IVS
Sbjct: 151 GSGTGDLLDLVIGEL-----PENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKRAIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
ISGTT D+IDT + +++IDTAGIR++ + TE +NRAF++I RSDV
Sbjct: 206 DISGTTTDSIDTLIKKGDNH-WKIIDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDV 261
Query: 461 VALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 262 CVLVIDAIDGVTDQ 275
>gi|390629413|ref|ZP_10257408.1| GTPase Der [Weissella confusa LBAE C39-2]
gi|390485317|emb|CCF29756.1| GTPase Der [Weissella confusa LBAE C39-2]
Length = 436
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 147/313 (46%), Positives = 188/313 (60%), Gaps = 42/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
P VA+VGRPNVGKS +FNR+ G +IV D PGVTRDR+Y R+ W EF L+DTGG
Sbjct: 3 FPVVAVVGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYTRAEWLTREFRLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I M P T+ I +QA AI+E+ VIIF+V
Sbjct: 61 ------------------IDMADEPFMTQ----------IVQQAEIAIDEADVIIFMVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLT ADE +A L ++ K ++LAVNK ++ ++ EF++LGF P PIS G
Sbjct: 93 QEGLTEADERVAKILYRS--KKPVVLAVNKVDNIEMR-SEIYEFYALGFGDPFPISGAHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD V S T D EE++ I + +GRPNVGKSS++NA++GE+R IVS
Sbjct: 150 TGLGDLLDEVVSHFP----TTDQEEEDDSI-RFSFIGRPNVGKSSLVNAILGEERVIVSD 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT FT EG +F ++DTAGIRKR + + TE SV RA RAI S+VV
Sbjct: 205 ISGTTRDAIDTRFTSAEGDEFVMVDTAGIRKRGKVYEN---TEKYSVMRAMRAIDDSNVV 261
Query: 462 ALVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 262 LMVLNAEEGIREQ 274
>gi|254526548|ref|ZP_05138600.1| small GTP-binding protein domain [Prochlorococcus marinus str. MIT
9202]
gi|221537972|gb|EEE40425.1| small GTP-binding protein domain [Prochlorococcus marinus str. MIT
9202]
Length = 457
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 189/314 (60%), Gaps = 41/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------EIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCK--TIVAVNKCESTTLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G+GTG+LLDLV EL E+ ++++ ++I+GRPNVGKSS+LN++ GE R IVS
Sbjct: 151 GSGTGDLLDLVIGEL-----PENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKRAIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
ISGTT D+IDT + +++IDTAGIR++ + TE +NRAF++I RSDV
Sbjct: 206 DISGTTTDSIDTLIKKGDNY-WKIIDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDV 261
Query: 461 VALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 262 CVLVIDAVDGVTDQ 275
>gi|91070353|gb|ABE11270.1| GTP-binding protein [uncultured Prochlorococcus marinus clone
HF10-88F10]
Length = 457
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 189/314 (60%), Gaps = 41/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------EIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCKT--IVAVNKCESTNLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G+GTG+LLDLV EL E+ ++++ ++I+GRPNVGKSS+LN++ GE R IVS
Sbjct: 151 GSGTGDLLDLVIGEL-----PENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKRAIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
ISGTT D+IDT + +++IDTAGIR++ + TE +NRAF++I RSDV
Sbjct: 206 DISGTTTDSIDTLIKKGDNY-WKIIDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDV 261
Query: 461 VALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 262 CVLVIDAIDGVTDQ 275
>gi|257439162|ref|ZP_05614917.1| ribosome-associated GTPase EngA [Faecalibacterium prausnitzii
A2-165]
gi|257198413|gb|EEU96697.1| ribosome biogenesis GTPase Der [Faecalibacterium prausnitzii
A2-165]
Length = 447
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 190/312 (60%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN+L G AIV D PG+TRDR++ W HEFMLVDTGG+
Sbjct: 4 PIVAVVGRPNVGKSTLFNKLCGQRLAIVEDTPGITRDRIFANCEWSGHEFMLVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P EGI RE QA AI+ + II +VD +
Sbjct: 62 ----EPK-----------ATEGILAHMRE------------QAEIAIDTADCIIMVVDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGT 342
GLTAADEE+A LR+++ K IILAVNKC+ + M++ EF++LGF LPIS++ G
Sbjct: 95 DGLTAADEEVAHMLRRSH--KPIILAVNKCDKTGEAPMELYEFYNLGFDEVLPISSVHGH 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD VC+ L E V EE+RIP +AI+GRPNVGKSS+ N ++GE+R IV+
Sbjct: 153 GTGDLLDAVCAHLDFSE----TVVEEDRIP-VAIIGRPNVGKSSLTNRILGENRMIVANE 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT G KF DTAG+RKR+ I+ E V RA A+ RS V
Sbjct: 208 AGTTRDAIDTPVDNAYG-KFIFTDTAGLRKRSNISDG---LERYMVVRALAAVERSRVAL 263
Query: 463 LVIEAMACITEQ 474
++++A TEQ
Sbjct: 264 ILVDATVGFTEQ 275
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 96/211 (45%), Gaps = 54/211 (25%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM-------YGRSFWGE 210
V E +P VAI+GRPNVGKS+L NR++G NR IV +E G TRD + YG+
Sbjct: 172 VEEDRIP-VAIIGRPNVGKSSLTNRILGENRMIVANEAGTTRDAIDTPVDNAYGK----- 225
Query: 211 HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAI 270
F+ DT G+ + + NI + L + +A AA+
Sbjct: 226 --FIFTDTAGL----RKRSNISDGLERYMVV-----------------------RALAAV 256
Query: 271 EESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE-- 325
E S V + LVD G T D ++A + + K I+ VNK E M+
Sbjct: 257 ERSRVALILVDATVGFTEQDSKVAGYAHEQ--GKACIIVVNKWDAVEGKETNTMEHQRRD 314
Query: 326 ----FWSLGFSPLP-ISAISGTGTGELLDLV 351
F +G++P+ ISA +G +L+ L+
Sbjct: 315 YADCFSFMGYAPIIFISAQTGYNVNKLMQLI 345
>gi|318042392|ref|ZP_07974348.1| GTP-binding protein Der [Synechococcus sp. CB0101]
Length = 454
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 150/315 (47%), Positives = 190/315 (60%), Gaps = 45/315 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y +W + F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLCKSREAIVHDEPGVTRDRTYQDGYWRDRHFKVVDTGGLV 62
Query: 223 --NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ S+ P I E QA A+ E+ V + +
Sbjct: 63 FDDDSEFLPEIRE-------------------------------QANLALSEASVAVVIA 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ GLTAADE IA+WLR + + ++LAVNKCESP G+ +EFWSLG P PISAI
Sbjct: 92 DGQQGLTAADESIAEWLRGHNVP--VLLAVNKCESPEAGLSMAAEFWSLGLGEPYPISAI 149
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG+LLD + L TE+L EE +AI+GRPNVGKSS+LNA+ GE R IV
Sbjct: 150 HGAGTGDLLDKLVDHLPP---TEELTGEEP--IQLAIIGRPNVGKSSLLNAICGEKRAIV 204
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SPI GTTRD IDT EG ++++DTAGIR++ ++ E +NR+F+AI RSD
Sbjct: 205 SPIRGTTRDTIDTTIE-REGHTWKILDTAGIRRKRSVNYG---PEFFGINRSFKAIERSD 260
Query: 460 VVALVIEAMACITEQ 474
V LVI+ + +TEQ
Sbjct: 261 VCVLVIDVLDGVTEQ 275
>gi|308069529|ref|YP_003871134.1| GTP-binding protein engA [Paenibacillus polymyxa E681]
gi|305858808|gb|ADM70596.1| GTP-binding protein engA [Paenibacillus polymyxa E681]
Length = 440
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 196/312 (62%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR++G +IV D+PG+TRDR+YG S W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIIGDRLSIVEDKPGITRDRIYGISEWNGKSFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I E + L + I QA AIEE+ VI+F+ D +
Sbjct: 62 ----------------EIDGEDVILKS-----------IRMQAELAIEEADVIVFMSDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+T +DEE+A L ++ K II+AVNK ++ + + + EF+S GF P+ +S GT
Sbjct: 95 AGITQSDEEVAQMLYRS--GKPIIVAVNKVDNLSRADL-IYEFYSYGFGDPIAVSGSHGT 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + S L ++E ED +E+ + +A++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 152 GIGDLLDAITSNLPELE--EDHYDED--VIRVALIGRPNVGKSSLVNAILGEERVIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F +GQK+ LIDTAG+RKR + TTE SV RA RAI R+DVV
Sbjct: 208 AGTTRDAIDTPFE-KDGQKYVLIDTAGMRKRGKVY---ETTEKYSVMRAMRAIERADVVL 263
Query: 463 LVIEAMACITEQ 474
+VI I EQ
Sbjct: 264 VVINGEEGIIEQ 275
>gi|365924922|ref|ZP_09447685.1| GTP-binding protein Der [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|420266395|ref|ZP_14768867.1| GTP-binding protein Der [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394425505|gb|EJE98464.1| GTP-binding protein Der [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 436
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 147/313 (46%), Positives = 193/313 (61%), Gaps = 44/313 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y S W +F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTVFNRIAGERISIVEDVPGVTRDRIYAHSEWLGQKFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I QA AI+E+ VI+F+V +
Sbjct: 62 ----------------DIGDE--PFLTQ----------ITEQAEIAIDEADVIVFVVSVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPR-KGIMQVSEFWSLGFS-PLPISAISG 341
G+T ADE++A L K+ DK +ILAVNK ++P +G + +F+SLGF PL +S+ G
Sbjct: 94 EGITDADEKVARILYKS--DKPVILAVNKVDNPELRG--DIFDFYSLGFGEPLAVSSTHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G G+LLD +C E+ VEEE++ +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 150 IGVGDLLDKICHSF-----PENQVEEEDKTIRFSLIGRPNVGKSSLVNAILGENRVIVSN 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRDAIDT F +G +F +IDTAGIRKR + + TE SV RA RAI RSDVV
Sbjct: 205 IEGTTRDAIDTPFISSQGDEFTVIDTAGIRKRGKVYEN---TEKYSVLRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 262 LVVLNAEEGIREQ 274
>gi|403380787|ref|ZP_10922844.1| GTP-binding protein Der [Paenibacillus sp. JC66]
Length = 440
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 195/312 (62%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNRL+G AIV D+PGVTRDR+YG W + F ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRLIGDRLAIVEDKPGVTRDRLYGTGEWLDTTFNVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ I++ + + QA AIEE+ VIIF+VDG+
Sbjct: 62 EIDGEDEIIKSVKV---------------------------QAELAIEEADVIIFMVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT ADEEI L ++ K I+LAVNK ++P++ M + EF+SLGF P+PIS G
Sbjct: 95 AGLTPADEEIGQLLFRS--GKPIVLAVNKVDNPQRAEM-IYEFYSLGFGDPIPISGSHGI 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + L+K +D E + +A++GRPNVGKSS++NA++GE+R IVS +
Sbjct: 152 GIGDLLD---AALEKCP-PDDQDEYGEEVIKVALIGRPNVGKSSLVNAILGEERVIVSGV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F +GQ F LIDTAG+RKR + + TE SV RA +AI R+DVV
Sbjct: 208 AGTTRDAIDTPFE-RDGQDFVLIDTAGMRKRGKVYEN---TEKYSVMRAMKAIERADVVL 263
Query: 463 LVIEAMACITEQ 474
+VI I EQ
Sbjct: 264 IVINGEEGIIEQ 275
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 38/198 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA++GRPNVGKS+L N ++G R IV G TRD + +F+L+DT G+
Sbjct: 178 KVALIGRPNVGKSSLVNAILGEERVIVSGVAGTTRDAIDTPFERDGQDFVLIDTAGMRKR 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + +V R A AIE + V++ +++G+
Sbjct: 238 GKVYEN-------------------TEKYSVMR--------AMKAIERADVVLIVINGEE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE-----FWSLGFSP-LP 335
G+ D+ IA + + K +L VNK E K + Q ++ F + ++P L
Sbjct: 271 GIIEQDKHIAGYAHE--AGKACVLIVNKWDAVEKDDKTLQQFTQSIRDHFLFMSYAPILF 328
Query: 336 ISAISGTGTGELLDLVCS 353
+SA + +LL LV
Sbjct: 329 VSAKTKQRLHKLLPLVVQ 346
>gi|333370718|ref|ZP_08462700.1| ribosome-associated GTPase EngA [Desmospora sp. 8437]
gi|332977201|gb|EGK13997.1| ribosome-associated GTPase EngA [Desmospora sp. 8437]
Length = 455
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 191/313 (61%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G AIV D+PG+TRDR+Y R W F ++DTGG+
Sbjct: 18 LPVVAIVGRPNVGKSTLFNRIAGERIAIVEDKPGITRDRIYTRGDWSGRHFHVIDTGGLE 77
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K + + I QA AIEE+ VI+F+VDG
Sbjct: 78 FGKKDE-----------------------------VVEHIRHQAELAIEEADVILFMVDG 108
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
G+T+ DEE++ L ++ +K ++LAVNK + K V EF+ LGF P+ IS++ G
Sbjct: 109 HDGVTSTDEEVSRILHRS--NKPVVLAVNKLDDV-KHHENVYEFYRLGFDEPIGISSLHG 165
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TGTG+LLD V L E E ++ ++I+GRPNVGKSS++N ++GE+R IVSP
Sbjct: 166 TGTGDLLDAVVDRLPDREEEE----YDSDTIRVSIIGRPNVGKSSLVNRILGEERVIVSP 221
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDA+DT FT EGQ + ++DTAG+RKR + TTE SV RA RAI R+DVV
Sbjct: 222 VAGTTRDAVDTPFT-HEGQDYVIVDTAGMRKRGKVY---ETTEKYSVLRALRAIERADVV 277
Query: 462 ALVIEAMACITEQ 474
+V++ +TEQ
Sbjct: 278 LIVLDGTEGVTEQ 290
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 27/130 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RV+I+GRPNVGKS+L NR++G R IV G TRD + ++++VDT G+
Sbjct: 193 RVSIIGRPNVGKSSLVNRILGEERVIVSPVAGTTRDAVDTPFTHEGQDYVIVDTAGM--- 249
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIE + V++ ++DG
Sbjct: 250 -RKRGKVYE---------------TTEKYSVLR--------ALRAIERADVVLIVLDGTE 285
Query: 285 GLTAADEEIA 294
G+T D+ +A
Sbjct: 286 GVTEQDKRVA 295
>gi|157412804|ref|YP_001483670.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9215]
gi|166920102|sp|A8G3A3.1|DER_PROM2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|157387379|gb|ABV50084.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str.
MIT 9215]
Length = 457
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 142/314 (45%), Positives = 191/314 (60%), Gaps = 41/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------EIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCKT--IVAVNKCESTTLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G+GTG+LLDLV EL + ++ ++E +I ++I+GRPNVGKSS+LN++ GE R IVS
Sbjct: 151 GSGTGDLLDLVIGELPE----NNIRDDEEKI-MMSIIGRPNVGKSSLLNSICGEKRAIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
ISGTT D+IDT + +++IDTAGIR++ + TE +NRAF++I RSDV
Sbjct: 206 DISGTTTDSIDTLIKKGDNY-WKIIDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDV 261
Query: 461 VALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 262 CVLVIDAVDGVTDQ 275
>gi|163848650|ref|YP_001636694.1| GTP-binding protein EngA [Chloroflexus aurantiacus J-10-fl]
gi|222526586|ref|YP_002571057.1| GTP-binding protein EngA [Chloroflexus sp. Y-400-fl]
gi|189037140|sp|A9WHH9.1|DER_CHLAA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783145|sp|B9LBT6.1|DER_CHLSY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|163669939|gb|ABY36305.1| small GTP-binding protein [Chloroflexus aurantiacus J-10-fl]
gi|222450465|gb|ACM54731.1| small GTP-binding protein [Chloroflexus sp. Y-400-fl]
Length = 449
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 185/312 (59%), Gaps = 35/312 (11%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS FNRL+G RAIV D PG TRDR+YG +FW EF +VDT GVL
Sbjct: 4 PIVAIVGRPNVGKSTFFNRLIGERRAIVEDLPGTTRDRLYGDTFWNGREFTVVDTAGVL- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
PN+ EA +AR QA AI E+ IIF+VDG+
Sbjct: 63 FGGEDPNLP-------------------EAEIARRTRA---QAEHAIAEADAIIFIVDGR 100
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD ++AD LR K ++LAVNKC+S + ++ EF++L P+P+SA G
Sbjct: 101 DGLTAADSDVADVLRTT--SKPVVLAVNKCDSQER-MLDAVEFYALNLGEPIPMSAFHGL 157
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG++LD + L + +EE R IAIVGRPNVGKSS+LN L+G++R++VS I
Sbjct: 158 GTGDVLDRLTEYLPP----KTFTQEEERHLRIAIVGRPNVGKSSLLNRLLGQERSVVSSI 213
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD IDT T G+ LIDTAGIR+ I E SV R RAI R DV
Sbjct: 214 PGTTRDPIDTTITY-HGEPITLIDTAGIRRAGKIERG---IEKYSVLRTLRAIERCDVAL 269
Query: 463 LVIEAMACITEQ 474
L+I+A +T Q
Sbjct: 270 LLIDATEGVTAQ 281
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 99/221 (44%), Gaps = 49/221 (22%)
Query: 161 HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG 220
HL R+AIVGRPNVGKS+L NRL+G R++V PG TRD + + L+DT G
Sbjct: 182 HL--RIAIVGRPNVGKSSLLNRLLGQERSVVSSIPGTTRDPIDTTITYHGEPITLIDTAG 239
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ K + I E ++ T+ AIE V + L+
Sbjct: 240 IRRAGKIERGI-EKYSVLRTL--------------------------RAIERCDVALLLI 272
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIM-------QVSE-FWSLGFS 332
D G+TA D IA + + K +IL VNK ++ K QV E F + ++
Sbjct: 273 DATEGVTAQDTHIAGMVVE--AKKGLILVVNKWDAIEKDSHTYYAFQDQVREAFKFVDYA 330
Query: 333 PLP-ISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIP 372
P+ +SA++G LLD E V+ + R+P
Sbjct: 331 PIVFVSALTGQRVSHLLDY---------AREVYVQRQKRVP 362
>gi|323340745|ref|ZP_08080997.1| ribosome-associated GTPase EngA [Lactobacillus ruminis ATCC 25644]
gi|417974258|ref|ZP_12615079.1| GTP-binding protein Der [Lactobacillus ruminis ATCC 25644]
gi|323091868|gb|EFZ34488.1| ribosome-associated GTPase EngA [Lactobacillus ruminis ATCC 25644]
gi|346329255|gb|EGX97553.1| GTP-binding protein Der [Lactobacillus ruminis ATCC 25644]
Length = 436
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y RS W F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTVFNRIAGERISIVEDTPGVTRDRIYARSEWMGQAFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I QA AI+E+ VI+F+ +
Sbjct: 62 ----------------DIGDE--PFVTQ----------ITEQAEIAIDEADVIVFVTSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L K DK +ILAVNK ++P ++ +F+SLGF P+PIS G
Sbjct: 94 EGVTDADEKVARILYKT--DKPVILAVNKVDNPEVR-SEIYDFYSLGFGDPVPISGTHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLDL+ ED+ EE + + +GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GTGDLLDLIVKNFP-----EDVTEEIDDSIKFSFIGRPNVGKSSLVNAILGENRVIVSNI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT+FT +G + +IDTAGIRK+ + + TE SV RA +AI RSDVV
Sbjct: 206 EGTTRDAIDTKFTTEDGSVYTMIDTAGIRKKGKVYEN---TEKYSVLRAMQAIDRSDVVC 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIREQ 274
>gi|241896284|ref|ZP_04783580.1| GTP-binding protein EngA [Weissella paramesenteroides ATCC 33313]
gi|241870525|gb|EER74276.1| GTP-binding protein EngA [Weissella paramesenteroides ATCC 33313]
Length = 436
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/313 (45%), Positives = 187/313 (59%), Gaps = 42/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
P VA+VGRPNVGKS +FNR+ G +IV D PGVTRDR+Y R+ W HEF L+DTGG
Sbjct: 3 FPVVAVVGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYTRAEWLTHEFRLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I M P S I +QA AI+E+ VI+F+V
Sbjct: 61 ------------------IDMGDEPFM----------SQIVQQAEIAIDEADVIVFMVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ GLT ADE +A L ++ K ++LAVNK ++ ++ EF++LGF P PIS G
Sbjct: 93 REGLTEADERVAKILYRS--KKPVVLAVNKVDNIELR-SEIYEFYALGFGDPYPISGAHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD V + ++E +EE+ + +GRPNVGKSS++NA++GE+R IVS
Sbjct: 150 TGLGDLLDQVVANFPEIEA-----QEEDDAVRFSFIGRPNVGKSSLVNAILGEERVIVSD 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT FT G +F ++DTAGIRKR + S TE SV RA RAI S+VV
Sbjct: 205 ISGTTRDAIDTRFTSAYGDEFVMVDTAGIRKRGKVYES---TEKYSVMRAMRAIDDSNVV 261
Query: 462 ALVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 262 LVVLNAEEGIREQ 274
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR--SFWGEHEFMLVDTGGVL 222
R + +GRPNVGKS+L N ++G R IV D G TRD + R S +G+ EF++VDT G+
Sbjct: 176 RFSFIGRPNVGKSSLVNAILGEERVIVSDISGTTRDAIDTRFTSAYGD-EFVMVDTAGI- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + E +T + +V R A AI++S V++ +++
Sbjct: 234 ---RKRGKVYE---------------STEKYSVMR--------AMRAIDDSNVVLVVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
+ G+ D+ +A + + + +I+ VNK ++ K ++ EF L ++P+
Sbjct: 268 EEGIREQDKHVAGYAHE--AGRAVIIVVNKWDTLEKDNHTMADFENQIRQEFQYLSYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L L+
Sbjct: 326 VFVSAMTKQRLNKLPALI 343
>gi|319946441|ref|ZP_08020678.1| ribosome-associated GTPase EngA [Streptococcus australis ATCC
700641]
gi|417919922|ref|ZP_12563443.1| ribosome-associated GTPase EngA [Streptococcus australis ATCC
700641]
gi|319747409|gb|EFV99665.1| ribosome-associated GTPase EngA [Streptococcus australis ATCC
700641]
gi|342831478|gb|EGU65794.1| ribosome-associated GTPase EngA [Streptococcus australis ATCC
700641]
Length = 436
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W H+F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATAEWLNHQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLP+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPVILAVNKVDNPEMR-TDIYDFYALGLGEPLPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L D E + +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVENLPT-----DREPENPDVIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ++ +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTHFTDAEGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|27262166|gb|AAN87364.1| GTP-binding protein [Heliobacillus mobilis]
Length = 445
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 151/314 (48%), Positives = 192/314 (61%), Gaps = 44/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL GG AIV D PGVTRDR+Y + W EF LVDTGG+
Sbjct: 7 PIVAVVGRPNVGKSTLFNRLTGGRVAIVEDRPGVTRDRLYRNAKWLNREFTLVDTGGL-- 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
G +G P + +I +QA AAI E+ VI+F+VDG+
Sbjct: 65 ----------------EFGADGNPFS----------EVIYKQAEAAIAEADVILFMVDGK 98
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCE--SPRKGIMQVSEFWSLGFS-PLPISAIS 340
AG+TA DE +A LR+ K + L VNK E S R + EF++LG P+PISA
Sbjct: 99 AGITADDETVAAVLRRT--KKPVFLVVNKIEDFSQRD---KYYEFFALGLGDPIPISATH 153
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G TG+LLD V L EG E E++ IA++G+PNVGKSS++NA++GE+R IVS
Sbjct: 154 GMNTGDLLDAVIEALPP-EGDE---EDDPDTIKIAVIGKPNVGKSSMVNAILGEERVIVS 209
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F EG+ + LIDTAG+R++ I S E SV R+ RA+ RSDV
Sbjct: 210 NIPGTTRDAIDTPFER-EGKHYVLIDTAGMRRKGKIDES---VERYSVMRSLRAVDRSDV 265
Query: 461 VALVIEAMACITEQ 474
V +VI+A +TEQ
Sbjct: 266 VLMVIDASQGVTEQ 279
>gi|419780756|ref|ZP_14306597.1| ribosome-associated GTPase EngA [Streptococcus oralis SK100]
gi|383184929|gb|EIC77434.1| ribosome-associated GTPase EngA [Streptococcus oralis SK100]
Length = 436
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/315 (45%), Positives = 189/315 (60%), Gaps = 48/315 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K Y K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTY--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG++LD + VE VEEEN + +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAI------VENLPHEVEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SP++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RS
Sbjct: 202 ASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRS 258
Query: 459 DVVALVIEAMACITE 473
DVV +V+ A I E
Sbjct: 259 DVVLMVLNAEEGIRE 273
>gi|385260943|ref|ZP_10039081.1| ribosome-associated GTPase EngA [Streptococcus sp. SK140]
gi|385190216|gb|EIF37665.1| ribosome-associated GTPase EngA [Streptococcus sp. SK140]
Length = 436
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/314 (45%), Positives = 189/314 (60%), Gaps = 44/314 (14%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++
Sbjct: 92 GKEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG++LD + VE VEEEN + +++GRPNVGKSS++NA++GEDR I
Sbjct: 149 GIGTGDVLDAI------VENLPHEVEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIA 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SP++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSD
Sbjct: 203 SPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSD 259
Query: 460 VVALVIEAMACITE 473
VV +V+ A I E
Sbjct: 260 VVLMVLNAEEGIRE 273
>gi|417092258|ref|ZP_11956992.1| GTP-binding protein EngA [Streptococcus suis R61]
gi|353532827|gb|EHC02496.1| GTP-binding protein EngA [Streptococcus suis R61]
Length = 436
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 186/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L K +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSRILYKT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E VEE I +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIIENLPAQE-----VEENPDIIKFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT PEGQ+F +IDTAG+RK + + TE SV RA RAI RSDV+
Sbjct: 205 VAGTTRDAIDTHFTDPEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIERSDVI 261
Query: 462 ALVIEAMACITE 473
+VI A I E
Sbjct: 262 LMVINAEEGIRE 273
>gi|421487543|ref|ZP_15934945.1| ribosome-associated GTPase EngA [Streptococcus oralis SK304]
gi|400370473|gb|EJP23457.1| ribosome-associated GTPase EngA [Streptococcus oralis SK304]
Length = 436
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 189/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + VEEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEVEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +V+ A I E
Sbjct: 261 VLMVLNAEEGIRE 273
>gi|309791206|ref|ZP_07685738.1| small GTP-binding protein [Oscillochloris trichoides DG-6]
gi|308226768|gb|EFO80464.1| small GTP-binding protein [Oscillochloris trichoides DG6]
Length = 525
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 184/312 (58%), Gaps = 35/312 (11%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS FNRL+G RAIV D PG TRDR+YG +FW +F +VDT G+L
Sbjct: 69 PIVALVGRPNVGKSTFFNRLIGERRAIVEDMPGTTRDRIYGDTFWNGRDFTVVDTAGLL- 127
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
PN+ VA M QA AIEE+ +IF+VDG+
Sbjct: 128 FGGDDPNL----------------------PVAEMSRRTREQANLAIEEADAVIFMVDGR 165
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAAD E+AD LR K ++LAVNKC+S + + V EF++L P+P+SA
Sbjct: 166 EGMTAADNEVADVLRGT--SKPVVLAVNKCDSVERNLDAV-EFYALNLGEPIPMSAFHSL 222
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG++LD + + +D R IAIVGRPNVGKSS+LN L+G++R++VS I
Sbjct: 223 GTGDVLDRLVEAFPPYQAPDD----TERHLHIAIVGRPNVGKSSLLNKLLGQERSVVSAI 278
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD+IDTE T G++ LIDTAGIR+ I E SV R RAI R DV
Sbjct: 279 PGTTRDSIDTEITF-HGERVTLIDTAGIRRSGRIEQG---IEKYSVMRTLRAIERCDVAL 334
Query: 463 LVIEAMACITEQ 474
L+I+A IT Q
Sbjct: 335 LLIDAEEGITAQ 346
>gi|116511562|ref|YP_808778.1| GTP-binding protein EngA [Lactococcus lactis subsp. cremoris SK11]
gi|125624594|ref|YP_001033077.1| GTP-binding protein EngA [Lactococcus lactis subsp. cremoris
MG1363]
gi|389854963|ref|YP_006357207.1| GTP-binding protein EngA [Lactococcus lactis subsp. cremoris
NZ9000]
gi|414073971|ref|YP_006999188.1| GTP-binding protein EngA [Lactococcus lactis subsp. cremoris
UC509.9]
gi|123320527|sp|Q030L6.1|DER_LACLS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166198724|sp|A2RM49.1|DER_LACLM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|116107216|gb|ABJ72356.1| Predicted GTPase [Lactococcus lactis subsp. cremoris SK11]
gi|124493402|emb|CAL98376.1| putative phosphoglycerate dehydrogenase [Lactococcus lactis subsp.
cremoris MG1363]
gi|300071385|gb|ADJ60785.1| GTP-binding protein EngA [Lactococcus lactis subsp. cremoris
NZ9000]
gi|413973891|gb|AFW91355.1| GTP-binding protein EngA [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 436
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F ++DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLTRKFNIIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T I QA A+ E+ VII +VDG
Sbjct: 61 ------------------IELSDEPFMTE----------IRAQAEIAMTEADVIIAVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A+ L + DK +IL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADEAVANILYRT--DKPVILIVNKVDNPERR-MEIFDFYSLGLGDPYPVSAVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENR-IPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L + +EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAIVQNLP------NEIEEENEDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI+GTTRDAIDT F E Q+F +IDTAG+RK I + TE SV RA RAI RSD+
Sbjct: 204 PIAGTTRDAIDTHFVDSEDQEFVMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDI 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|417941246|ref|ZP_12584533.1| ribosome-associated GTPase EngA [Streptococcus oralis SK313]
gi|343388539|gb|EGV01125.1| ribosome-associated GTPase EngA [Streptococcus oralis SK313]
Length = 436
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE VEEEN I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPHEVEEENPDIIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +V+ A I E
Sbjct: 261 VLMVLNAEEGIRE 273
>gi|152975027|ref|YP_001374544.1| GTP-binding protein EngA [Bacillus cytotoxicus NVH 391-98]
gi|189037136|sp|A7GN41.1|DER_BACCN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|152023779|gb|ABS21549.1| small GTP-binding protein [Bacillus cytotoxicus NVH 391-98]
Length = 436
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 195/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERISIVEDIPGVTRDRIYSAGEWLNHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PFLTQ----------IRQQAEVAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ +K ++LAVNK ++P ++ +F++LGF P PIS G
Sbjct: 94 DGVTAADEEVAKILYRS--NKPVVLAVNKVDNPEMR-NEIYDFYALGFGEPFPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V KVE E+ +E R ++GRPNVGKSS++NAL+G++R IVS +
Sbjct: 151 GLGDLLDEVAQHFPKVE-EEEYDDETIRF---CLIGRPNVGKSSLVNALLGQERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT +T +GQ + +IDTAG+RK+ + S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDTPYT-KDGQDYVIIDTAGMRKKGKVYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R ++GRPNVGKS+L N L+G R IV + G TRD + +++++DT G+
Sbjct: 177 RFCLIGRPNVGKSSLVNALLGQERVIVSNVAGTTRDAVDTPYTKDGQDYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++DG+
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSE------FWSLGFSPLP- 335
G+ D++IA + + + +++ VNK ++ +K M+ E F L ++P+
Sbjct: 270 GIIEQDKKIAGYAHDS--GRAVVIVVNKWDAVKKDEKTMKAFEDNIRAHFQFLDYAPIVF 327
Query: 336 ISAISGTGTGELLDLV 351
+SA + T LL ++
Sbjct: 328 LSAKTKKRTQTLLPVI 343
>gi|385838784|ref|YP_005876414.1| GTP-binding protein EngA [Lactococcus lactis subsp. cremoris A76]
gi|358750012|gb|AEU40991.1| GTP-binding protein EngA [Lactococcus lactis subsp. cremoris A76]
Length = 436
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F ++DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLTRKFNIIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T I QA A+ E+ VII +VDG
Sbjct: 61 ------------------IELSDEPFMTE----------IRAQAEIAMTEADVIIAVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A+ L + DK +IL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADEAVANILYRT--DKPVILIVNKVDNPERR-MEIFDFYSLGLGDPYPVSAVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENR-IPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L + +EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAIVQNLP------NEIEEENEDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI+GTTRDAIDT F E Q+F +IDTAG+RK I + TE SV RA RAI RSD+
Sbjct: 204 PIAGTTRDAIDTHFVDSEDQEFVMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDI 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|167630055|ref|YP_001680554.1| GTP-binding protein EngA [Heliobacterium modesticaldum Ice1]
gi|238687893|sp|B0TFW3.1|DER_HELMI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|167592795|gb|ABZ84543.1| GTP-binding protein [Heliobacterium modesticaldum Ice1]
Length = 442
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/314 (46%), Positives = 195/314 (62%), Gaps = 44/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL GG AIV D+PGVTRDR+Y + W + EF +VDTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRLTGGRVAIVEDQPGVTRDRLYRDANWLDREFTVVDTGGLDF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ P ++I +QA AA+EE+ VI+FLVDG+
Sbjct: 64 GDRENP----------------------------FSAIIHKQAEAAMEEADVILFLVDGR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCE--SPRKGIMQVSEFWSLGFS-PLPISAIS 340
+G+TA DE +A LRK K + L VNK E S R+ + +F+SLG P+PISA
Sbjct: 96 SGITADDEAVAAILRK--AKKPVFLVVNKIEDFSQRE---RYFDFYSLGLGEPIPISASH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G TG+LLD V + L + G +D + IA++GRPNVGKSS++NA++G++R IVS
Sbjct: 151 GMNTGDLLDAVVAVLPENNGEDD----DPDTIKIAVIGRPNVGKSSLVNAILGQERVIVS 206
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F +G+++ LIDTAG+R++ I + E SV R+ RAI RSDV
Sbjct: 207 DIPGTTRDAIDTAFD-RDGKRYILIDTAGMRRKGRIEEA---VERYSVMRSLRAIDRSDV 262
Query: 461 VALVIEAMACITEQ 474
V +VI+A +TEQ
Sbjct: 263 VLMVIDASQGVTEQ 276
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++GRPNVGKS+L N ++G R IV D PG TRD + ++L+DT G+
Sbjct: 179 KIAVIGRPNVGKSSLVNAILGQERVIVSDIPGTTRDAIDTAFDRDGKRYILIDTAGMRRK 238
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ E AV R M ++ AI+ S V++ ++D
Sbjct: 239 GRI------------------------EEAVERYSVM---RSLRAIDRSDVVLMVIDASQ 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
G+T D++IA + + K +L +NK + K +S F L ++P +
Sbjct: 272 GVTEQDKKIAGYAHE--AGKACVLVLNKWDLVPKDDKTMSRFDKVVRSEMSFLAYAPTIY 329
Query: 336 ISAISGTGTGELLDLV 351
+SA++ ++L+LV
Sbjct: 330 VSALTKQRLPKILELV 345
>gi|418974548|ref|ZP_13522458.1| ribosome-associated GTPase EngA [Streptococcus oralis SK1074]
gi|383348975|gb|EID26927.1| ribosome-associated GTPase EngA [Streptococcus oralis SK1074]
Length = 436
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 189/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLP+S++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + VEEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEVEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +V+ A I E
Sbjct: 261 VLMVLNAEEGIRE 273
>gi|322392688|ref|ZP_08066148.1| ribosome-associated GTPase EngA [Streptococcus peroris ATCC 700780]
gi|321144680|gb|EFX40081.1| ribosome-associated GTPase EngA [Streptococcus peroris ATCC 700780]
Length = 436
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P ++ +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NEIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L ++ EE + +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVENLP-----QEFEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|365902716|ref|ZP_09440539.1| GTP-binding protein Der [Lactobacillus malefermentans KCTC 3548]
Length = 436
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/314 (46%), Positives = 187/314 (59%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y S W +F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYANSEWMGTQFSLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I QA AI+E+ VI+FLV G+
Sbjct: 62 ----------------DIGDE--PFLKQ----------ISEQAEVAIDEADVIVFLVSGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAIS 340
G+T ADE +A L K+ +K +ILAVNK ++P R GI +F++LGF P PIS
Sbjct: 94 GGVTDADEHVARILYKS--NKPVILAVNKVDNPEMRVGIY---DFYALGFGDPFPISGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G+LLD V E EE++ +++GRPNVGKSSI+NAL+G DR IVS
Sbjct: 149 GIGLGDLLDAVVKAFP-----ESANYEEDKTIRFSLIGRPNVGKSSIVNALLGTDRVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I+GTTRDA+DT FT P+G +F ++DTAGIRKR + + TE SV RA +AI SDV
Sbjct: 204 DIAGTTRDAVDTPFTTPDGDEFTMVDTAGIRKRGKVYEN---TERYSVMRAMKAIDNSDV 260
Query: 461 VALVIEAMACITEQ 474
V +I A I EQ
Sbjct: 261 VLFIINAEEGIREQ 274
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 43/212 (20%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFM 214
N E R +++GRPNVGKS++ N L+G +R IV D G TRD + F EF
Sbjct: 168 NYEEDKTIRFSLIGRPNVGKSSIVNALLGTDRVIVSDIAGTTRDAV-DTPFTTPDGDEFT 226
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
+VDT G+ K N T +V R A AI+ S
Sbjct: 227 MVDTAGIRKRGKVYEN-------------------TERYSVMR--------AMKAIDNSD 259
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG--------IMQVSEF 326
V++F+++ + G+ D+++A + + + I++ VNK ++ +K + EF
Sbjct: 260 VVLFIINAEEGIREQDKKVAGYAHQ--AGRGIVIVVNKWDTIKKDNHSLHDFEVHVREEF 317
Query: 327 WSLGFSPLPISAISGTGTGELLDLVCSELKKV 358
L ++P+ TG+ L+ + +KKV
Sbjct: 318 QYLAYAPM---IFVSAKTGQRLEKLPELIKKV 346
>gi|149006625|ref|ZP_01830324.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP18-BS74]
gi|147761923|gb|EDK68886.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP18-BS74]
Length = 358
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|414160851|ref|ZP_11417114.1| GTPase Der [Staphylococcus simulans ACS-120-V-Sch1]
gi|410876530|gb|EKS24428.1| GTPase Der [Staphylococcus simulans ACS-120-V-Sch1]
Length = 436
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/312 (45%), Positives = 192/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E + A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------ELSDAPFQTQIRAQAEVAIDEADVIIFMVNQR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
GLT DE IA L K +K ++LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 EGLTQTDEMIAQMLYKT--NKPVVLAVNKVDNPEMR-ADIYDFYALGFGEPFPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K EG +DL +E+ ++++GRPNVGKSS++NA++GEDR IVS I
Sbjct: 151 GLGDLLDEVAKHFKD-EG-DDLYDEDT--IRLSLIGRPNVGKSSLVNAILGEDRVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ EGQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YEGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+V++A I EQ
Sbjct: 263 VVLDAEEGIIEQ 274
>gi|335996764|ref|ZP_08562681.1| GTP-binding protein EngA [Lactobacillus ruminis SPM0211]
gi|335351834|gb|EGM53325.1| GTP-binding protein EngA [Lactobacillus ruminis SPM0211]
Length = 436
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 188/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y RS W F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTVFNRIAGERISIVEDTPGVTRDRIYARSEWMGQAFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I QA AI+E+ VI+F+ +
Sbjct: 62 ----------------DIGDE--PFVTQ----------ITEQAEIAIDEADVIVFVTSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L K DK +ILAVNK ++P ++ +F+SLGF P+PIS G
Sbjct: 94 EGVTDADEKVARILYKT--DKPVILAVNKVDNPEVR-SEIYDFYSLGFGDPVPISGTHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLDL+ ED EE + + +GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GTGDLLDLIVKNFP-----EDATEEIDDSIKFSFIGRPNVGKSSLVNAILGENRVIVSNI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT+FT +G + +IDTAGIRK+ + + TE SV RA +AI RSDVV
Sbjct: 206 EGTTRDAIDTKFTTEDGSVYTMIDTAGIRKKGKVYEN---TEKYSVLRAMQAIDRSDVVC 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIREQ 274
>gi|347525632|ref|YP_004832380.1| GTP-binding protein EngA [Lactobacillus ruminis ATCC 27782]
gi|345284591|gb|AEN78444.1| GTP-binding protein EngA [Lactobacillus ruminis ATCC 27782]
Length = 436
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 188/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y RS W F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTVFNRIAGERISIVEDTPGVTRDRIYARSEWMGQAFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I QA AI+E+ VI+F+ +
Sbjct: 62 ----------------DIGDE--PFVTQ----------ITEQAEIAIDEADVIVFVTSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L K DK +ILAVNK ++P ++ +F+SLGF P+PIS G
Sbjct: 94 EGVTDADEKVARILYKT--DKPVILAVNKVDNPEVR-SEIYDFYSLGFGDPVPISGTHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLDL+ ED EE + + +GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GTGDLLDLIVKNFP-----EDATEEIDDSIKFSFIGRPNVGKSSLVNAILGENRVIVSNI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT+FT +G + +IDTAGIRK+ + + TE SV RA +AI RSDVV
Sbjct: 206 EGTTRDAIDTKFTTDDGSVYTMIDTAGIRKKGKVYEN---TEKYSVLRAMQAIDRSDVVC 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIREQ 274
>gi|315646409|ref|ZP_07899527.1| GTP-binding protein EngA [Paenibacillus vortex V453]
gi|315278052|gb|EFU41372.1| GTP-binding protein EngA [Paenibacillus vortex V453]
Length = 440
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/312 (45%), Positives = 198/312 (63%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNRL+G AIV D+PG+TRDR+YG + W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRLIGDRLAIVEDKPGITRDRIYGSAEWNGKAFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I D I +I M QA AIEE+ VI+F+ D +
Sbjct: 62 ------EIDGDDMILKSIRM---------------------QAELAIEEADVIVFMCDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+T +DEE+A L ++ K +IL+VNK ++ ++ + + EF+SLGF P+ IS GT
Sbjct: 95 AGVTQSDEEVAQILFRS--GKPVILSVNKVDNLKR-VDDIYEFYSLGFGDPVGISGSHGT 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD+V L ++E +D +E+ + +A++GRPNVGKSS++NA++GE+R IVS +
Sbjct: 152 GIGDLLDVVVENLPELE--DDGYDED--VIRVALIGRPNVGKSSLVNAILGEERVIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F +GQ++ LIDTAG+RKR + TTE SV RA RAI R+DVV
Sbjct: 208 AGTTRDAIDTPFE-KDGQRYVLIDTAGMRKRGKVY---ETTEKYSVMRAMRAIERADVVL 263
Query: 463 LVIEAMACITEQ 474
++I I EQ
Sbjct: 264 VLINGEEGIIEQ 275
>gi|306827971|ref|ZP_07461238.1| ribosome-associated GTPase EngA [Streptococcus pyogenes ATCC 10782]
gi|304429890|gb|EFM32932.1| ribosome-associated GTPase EngA [Streptococcus pyogenes ATCC 10782]
Length = 436
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 140/313 (44%), Positives = 187/313 (59%), Gaps = 42/313 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E VEE + I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDVLDAIVENLPVEE-----VEENDDIIHFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAIRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|114566850|ref|YP_754004.1| hypothetical protein Swol_1325 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337785|gb|ABI68633.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 441
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 148/313 (47%), Positives = 192/313 (61%), Gaps = 43/313 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV-L 222
P VAIVGRPNVGKS LFNRL G +AIV D PGVTRDR+Y S W EF+++DTGG+
Sbjct: 3 PVVAIVGRPNVGKSTLFNRLAGARKAIVEDIPGVTRDRLYDSSDWNGREFIIIDTGGIRF 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
N EG A RE I+ QA AIEE+ VI+ ++D
Sbjct: 63 N--------------------EGDIFA-RE---------IKLQAELAIEEADVIVLVLDS 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+TA DE++A+ LRK+ +K ++LA NK E +K + EF+ LG P+P+SA+ G
Sbjct: 93 REGITAEDEQVANLLRKS--NKPVVLAANKVEEFKKQ-LDYYEFYKLGLGDPIPVSAMHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
T ELLD V S K EEE IAIVGRPNVGKSS++NAL+GE+R IVS
Sbjct: 150 YNTNELLDAVISHFKPALE----YEEEGDAIKIAIVGRPNVGKSSLVNALLGEERVIVSD 205
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
+ GTTRDAIDT F +GQ + LIDTAG+R+++ I TTE SV R +AI R+DVV
Sbjct: 206 VPGTTRDAIDTPFQF-KGQNYLLIDTAGMRRKSRIK---ETTERYSVIRTLKAIERADVV 261
Query: 462 ALVIEAMACITEQ 474
++++A + EQ
Sbjct: 262 LIMLDATEGVAEQ 274
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS+L N L+G R IV D PG TRD + + ++L+DT G+
Sbjct: 177 KIAIVGRPNVGKSSLVNALLGEERVIVSDVPGTTRDAIDTPFQFKGQNYLLIDTAGMRRK 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
S+ I T +V R AIE + V++ ++D
Sbjct: 237 SR-------------------IKETTERYSVIR--------TLKAIERADVVLIMLDATE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF--------WSLGFSP-LP 335
G+ D++IA ++ + + I+ VNK + K ++ F L +SP +
Sbjct: 270 GVAEQDKKIAGYVHEQ--SRANIIVVNKWDLVEKDGQTMNRFDKDIREELKFLSYSPIMY 327
Query: 336 ISAISGTGTGELLDLV 351
+SA++ ++L++V
Sbjct: 328 VSALTKKRIFQVLEIV 343
>gi|417938620|ref|ZP_12581917.1| ribosome-associated GTPase EngA [Streptococcus infantis SK970]
gi|343391080|gb|EGV03656.1| ribosome-associated GTPase EngA [Streptococcus infantis SK970]
Length = 436
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDIEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE VEEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPHEVEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDEDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +V+ A I E
Sbjct: 261 VLMVLNAEEGIRE 273
>gi|419778654|ref|ZP_14304541.1| ribosome-associated GTPase EngA [Streptococcus oralis SK10]
gi|383187076|gb|EIC79535.1| ribosome-associated GTPase EngA [Streptococcus oralis SK10]
Length = 436
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 144/315 (45%), Positives = 189/315 (60%), Gaps = 48/315 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG++LD + VE VEEEN + +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAI------VENLPHEVEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SP++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RS
Sbjct: 202 ASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRS 258
Query: 459 DVVALVIEAMACITE 473
DVV +V+ A I E
Sbjct: 259 DVVLMVLNAEEGIRE 273
>gi|81428627|ref|YP_395627.1| GTP-binding protein EngA [Lactobacillus sakei subsp. sakei 23K]
gi|123564226|sp|Q38WW3.1|DER_LACSS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|78610269|emb|CAI55318.1| Putative GTP-binding protein [Lactobacillus sakei subsp. sakei 23K]
Length = 436
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 186/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y S W HEF L+DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYTASEWLGHEFSLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E + A I++QA AI+E+ VIIFLV +
Sbjct: 62 ----------------------------EISDAPFMEQIKQQAEIAIDEADVIIFLVSAR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE +A L + +K I+L VNK ++P + + +F+SLGF P+P+S G
Sbjct: 94 EGVTDADERVAQILYR--AEKPILLGVNKADNPEQR-QDIFDFYSLGFGDPIPVSGAHGQ 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD ++ DL EE++ +++GRPNVGKSS++NA++ EDR IVS I
Sbjct: 151 GVGDLLDAAVAKFPT-----DLEEEDDDSIKFSLIGRPNVGKSSLVNAMLKEDRVIVSQI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT+F Q+F +IDTAGIRKR + + TE +V RA RAI RSDVV
Sbjct: 206 EGTTRDAIDTKFMAENNQEFTMIDTAGIRKRGKVYEN---TEKYAVMRALRAIDRSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIREQ 274
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 32/164 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH--EFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++ +R IV G TRD + F E+ EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLVNAMLKEDRVIVSQIEGTTRDAI-DTKFMAENNQEFTMIDTAGIR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + AV R A AI+ S V++ +++
Sbjct: 235 KRGKVYEN-------------------TEKYAVMR--------ALRAIDRSDVVLVVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+ G+ D+++A + + + II+ VNK ++ K + EF
Sbjct: 268 EEGIREQDKKVAGYAHE--AGRGIIIVVNKWDTLEKDNHTMKEF 309
>gi|410477078|ref|YP_006743837.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae
gamPNI0373]
gi|444388613|ref|ZP_21186592.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PCS125219]
gi|444389190|ref|ZP_21187107.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PCS70012]
gi|444392717|ref|ZP_21190415.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PCS81218]
gi|444394867|ref|ZP_21192417.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0002]
gi|444398160|ref|ZP_21195643.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0006]
gi|444399779|ref|ZP_21197214.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0007]
gi|444402945|ref|ZP_21200075.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0008]
gi|444407780|ref|ZP_21204447.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0010]
gi|444415057|ref|ZP_21211303.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0199]
gi|444418290|ref|ZP_21214277.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0360]
gi|444419682|ref|ZP_21215526.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0427]
gi|406370023|gb|AFS43713.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae
gamPNI0373]
gi|444248800|gb|ELU55300.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PCS125219]
gi|444257790|gb|ELU64123.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PCS70012]
gi|444259485|gb|ELU65799.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0002]
gi|444260817|gb|ELU67125.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0006]
gi|444262947|gb|ELU69192.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PCS81218]
gi|444265541|gb|ELU71543.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0008]
gi|444268255|gb|ELU74128.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0007]
gi|444271376|gb|ELU77127.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0010]
gi|444280740|gb|ELU86095.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0199]
gi|444281796|gb|ELU87095.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0360]
gi|444286337|gb|ELU91325.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0427]
Length = 436
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|417849478|ref|ZP_12495398.1| ribosome-associated GTPase EngA [Streptococcus mitis SK1080]
gi|339456072|gb|EGP68667.1| ribosome-associated GTPase EngA [Streptococcus mitis SK1080]
Length = 436
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|452990286|emb|CCQ98500.1| GTPase essential for ribosome 50S subunit assembly [Clostridium
ultunense Esp]
Length = 440
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 146/315 (46%), Positives = 194/315 (61%), Gaps = 47/315 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FN ++G AIV D PGVTRDR+YG + W ++ F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNHIMGERIAIVEDRPGVTRDRIYGTTEWLDYPFHLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+G E M + QA AI+E+ VI+F+VDG+
Sbjct: 62 ----------------EVGSED-----------EMLLQVRTQAELAIDEADVILFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSEFWSLGFS-PLPISAIS 340
+GLT+ DEEIA L ++ K ++L VNK + P + GIM EF+ LGF P P+S
Sbjct: 95 SGLTSTDEEIAGLLFRS--GKPVVLVVNKVDHPNQLPGIM---EFYRLGFGEPFPVSGAH 149
Query: 341 GTGTGELLDLVCSEL-KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
GTG G+LLD V +K+E E++ E+ R+ A++GRPNVGKSS++NA++GE+R IV
Sbjct: 150 GTGFGDLLDEVIKHFPEKIE--EEMDEDTIRV---ALIGRPNVGKSSLVNAILGEERVIV 204
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S ++GTTRDA+DT F EGQK+ LIDTAG+RKR + TTE SV RA AI RSD
Sbjct: 205 SEVAGTTRDAVDTPFVH-EGQKYLLIDTAGMRKRGKVY---ETTEKYSVLRALAAIERSD 260
Query: 460 VVALVIEAMACITEQ 474
V +V+ I EQ
Sbjct: 261 VALVVLNGEQGIIEQ 275
>gi|444406402|ref|ZP_21203154.1| ribosome biogenesis GTPase Der, partial [Streptococcus pneumoniae
PNI0009]
gi|444268277|gb|ELU74149.1| ribosome biogenesis GTPase Der, partial [Streptococcus pneumoniae
PNI0009]
Length = 405
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|374324515|ref|YP_005077644.1| GTP-binding protein Der [Paenibacillus terrae HPL-003]
gi|357203524|gb|AET61421.1| GTP-binding protein Der [Paenibacillus terrae HPL-003]
Length = 440
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/312 (45%), Positives = 196/312 (62%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR++G +IV D+PG+TRDR+YG S W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIIGDRLSIVEDKPGITRDRIYGISEWNGKSFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + I +I M QA AIEE+ VI+F+ D +
Sbjct: 62 ------EIDGEDEILKSIRM---------------------QAELAIEEADVIVFMSDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+T +DEE+A L ++ K +I+AVNK ++ + + + EF+S GF P+ IS G
Sbjct: 95 AGITQSDEEVAQMLYRS--GKPVIVAVNKVDNLERADL-IYEFYSYGFGDPIAISGSHGI 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + S L ++E ED+ +E+ + +A++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 152 GLGDLLDAITSNLPELE--EDIYDED--VIRVALIGRPNVGKSSLVNAILGEERVIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F +GQK+ LIDTAG+RKR + TTE SV RA RAI R+DVV
Sbjct: 208 AGTTRDAIDTPFE-KDGQKYVLIDTAGMRKRGKVY---ETTEKYSVMRAMRAIERADVVL 263
Query: 463 LVIEAMACITEQ 474
+VI I EQ
Sbjct: 264 VVINGEEGIIEQ 275
>gi|429205273|ref|ZP_19196550.1| GTP-binding protein Der [Lactobacillus saerimneri 30a]
gi|428146345|gb|EKW98584.1| GTP-binding protein Der [Lactobacillus saerimneri 30a]
Length = 436
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 191/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y S W H F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYTNSEWLGHPFSMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+G E PL + I QA AI+E+ VI+F+V +
Sbjct: 62 ----------------AVGDE--PLVQQ----------ISEQAEIAIDEADVIVFVVSVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L + +K +ILAVNK ++P + Q+ +F+SLGF P+P++ G
Sbjct: 94 EGVTDADEKVAKILYRT--NKPVILAVNKVDNPEQR-AQIYDFYSLGFGDPIPVAGTHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD + + G +EE+ + +GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GTGDLLDAIVKNFPENAG-----DEEDDSIKFSFIGRPNVGKSSLVNAILGEERVIVSGI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDA+DT+FT +G +F +IDTAGIRK+ + + TE SV RA RAI RSDVV
Sbjct: 206 EGTTRDAVDTKFTTADGSEFTMIDTAGIRKKGKVYEN---TEKYSVMRALRAIDRSDVVV 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 MVLNAEEGIREQ 274
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ + +GRPNVGKS+L N ++G R IV G TRD + + + EF ++DT G+
Sbjct: 176 KFSFIGRPNVGKSSLVNAILGEERVIVSGIEGTTRDAVDTKFTTADGSEFTMIDTAGIRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 KGKVYEN-------------------TEKYSVMR--------ALRAIDRSDVVVMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ +A + + K II+AVNK ++ +K ++ EF L ++P+
Sbjct: 269 EGIREQDKHVAGYAHE--AGKGIIIAVNKWDAIKKNTHSLNDFTAAIRQEFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA + GEL L+
Sbjct: 327 FVSAKTHQRLGELPALI 343
>gi|331265908|ref|YP_004325538.1| phosphoglycerate dehydrogenase, GTP-binding protein [Streptococcus
oralis Uo5]
gi|326682580|emb|CBZ00197.1| phosphoglycerate dehydrogenase, GTP-binding protein [Streptococcus
oralis Uo5]
Length = 436
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 144/315 (45%), Positives = 189/315 (60%), Gaps = 48/315 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG++LD + VE VEEEN + +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAI------VENLPHEVEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SP++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RS
Sbjct: 202 ASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRS 258
Query: 459 DVVALVIEAMACITE 473
DVV +V+ A I E
Sbjct: 259 DVVLMVLNAEEGIRE 273
>gi|307707079|ref|ZP_07643876.1| small GTP-binding domain protein [Streptococcus mitis SK321]
gi|307617605|gb|EFN96775.1| small GTP-binding domain protein [Streptococcus mitis SK321]
Length = 436
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|309798864|ref|ZP_07693125.1| GTP-binding protein EngA [Streptococcus infantis SK1302]
gi|308117513|gb|EFO54928.1| GTP-binding protein EngA [Streptococcus infantis SK1302]
Length = 436
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE +EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPHEIEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +V+ A I E
Sbjct: 261 VLMVLNAEEGIRE 273
>gi|270293072|ref|ZP_06199283.1| ribosome-associated GTPase EngA [Streptococcus sp. M143]
gi|417914970|ref|ZP_12558598.1| ribosome biogenesis GTPase Der [Streptococcus mitis bv. 2 str.
SK95]
gi|270279051|gb|EFA24897.1| ribosome-associated GTPase EngA [Streptococcus sp. M143]
gi|342835562|gb|EGU69802.1| ribosome biogenesis GTPase Der [Streptococcus mitis bv. 2 str.
SK95]
Length = 436
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE VEEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPHEVEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +V+ A I E
Sbjct: 261 VLMVLNAEEGIRE 273
>gi|251781814|ref|YP_002996116.1| GTP-binding protein EngA [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|386316339|ref|YP_006012503.1| GTP-binding protein EngA [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|410494127|ref|YP_006903973.1| GTP-binding protein engA [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|417753429|ref|ZP_12401554.1| ribosome biogenesis GTPase Der [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|417927615|ref|ZP_12571003.1| ribosome-associated GTPase EngA [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|242390443|dbj|BAH80902.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|323126626|gb|ADX23923.1| GTP-binding protein EngA [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|333770187|gb|EGL47242.1| ribosome biogenesis GTPase Der [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|340765489|gb|EGR88015.1| ribosome-associated GTPase EngA [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|410439287|emb|CCI61915.1| GTP-binding protein engA [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 436
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 140/313 (44%), Positives = 187/313 (59%), Gaps = 42/313 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E VEE + I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDVLDAIVENLPVEE-----VEENDDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|408401081|ref|YP_006859044.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
RE378]
gi|407967309|dbj|BAM60547.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
RE378]
Length = 436
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 140/313 (44%), Positives = 187/313 (59%), Gaps = 42/313 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E VEE + I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDVLDAIVENLPVEE-----VEENDDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|342164315|ref|YP_004768954.1| GTP-binding protein Der [Streptococcus pseudopneumoniae IS7493]
gi|341934197|gb|AEL11094.1| GTP-binding protein Der [Streptococcus pseudopneumoniae IS7493]
Length = 436
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|392429118|ref|YP_006470129.1| GTP-binding protein EngA [Streptococcus intermedius JTH08]
gi|419776548|ref|ZP_14302470.1| ribosome-associated GTPase EngA [Streptococcus intermedius SK54]
gi|383845959|gb|EID83359.1| ribosome-associated GTPase EngA [Streptococcus intermedius SK54]
gi|391758264|dbj|BAM23881.1| GTP-binding protein EngA [Streptococcus intermedius JTH08]
Length = 436
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 190/312 (60%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSMLFNRIAGERISIVEDVEGVTRDRIYATAEWLNRKFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIRHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S+I G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-SEIFDFYALGLGEPYPVSSIHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L K E++VE + I +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIVENLPK----EEVVENPDMI-KFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|148984151|ref|ZP_01817446.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP3-BS71]
gi|387757928|ref|YP_006064907.1| GTP-binding protein EngA [Streptococcus pneumoniae OXC141]
gi|418232708|ref|ZP_12859294.1| GTPase Der [Streptococcus pneumoniae GA07228]
gi|418237163|ref|ZP_12863729.1| GTPase Der [Streptococcus pneumoniae GA19690]
gi|419480547|ref|ZP_14020351.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA19101]
gi|419500252|ref|ZP_14039946.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47597]
gi|147923440|gb|EDK74553.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP3-BS71]
gi|301800517|emb|CBW33156.1| GTP-binding protein EngA [Streptococcus pneumoniae OXC141]
gi|353886021|gb|EHE65805.1| GTPase Der [Streptococcus pneumoniae GA07228]
gi|353891601|gb|EHE71355.1| GTPase Der [Streptococcus pneumoniae GA19690]
gi|379569716|gb|EHZ34683.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA19101]
gi|379599560|gb|EHZ64343.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47597]
gi|429316552|emb|CCP36259.1| GTP-binding protein EngA [Streptococcus pneumoniae SPN034156]
gi|429319892|emb|CCP33210.1| GTP-binding protein EngA [Streptococcus pneumoniae SPN034183]
gi|429321709|emb|CCP35184.1| GTP-binding protein EngA [Streptococcus pneumoniae SPN994039]
gi|429323530|emb|CCP31225.1| GTP-binding protein EngA [Streptococcus pneumoniae SPN994038]
Length = 436
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|417793725|ref|ZP_12440996.1| ribosome-associated GTPase EngA [Streptococcus oralis SK255]
gi|334272153|gb|EGL90523.1| ribosome-associated GTPase EngA [Streptococcus oralis SK255]
Length = 436
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE VEEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPHEVEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +V+ A I E
Sbjct: 261 VLMVLNAEEGIRE 273
>gi|405760425|ref|YP_006701021.1| GTP-binding protein EngA [Streptococcus pneumoniae SPNA45]
gi|404277314|emb|CCM07824.1| GTP-binding protein EngA [Streptococcus pneumoniae SPNA45]
Length = 436
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|15901543|ref|NP_346147.1| GTP-binding protein EngA [Streptococcus pneumoniae TIGR4]
gi|15903596|ref|NP_359146.1| GTP-binding protein EngA [Streptococcus pneumoniae R6]
gi|111657418|ref|ZP_01408170.1| hypothetical protein SpneT_02001366 [Streptococcus pneumoniae
TIGR4]
gi|116515879|ref|YP_816974.1| GTP-binding protein EngA [Streptococcus pneumoniae D39]
gi|148989364|ref|ZP_01820732.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP6-BS73]
gi|148997762|ref|ZP_01825326.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP11-BS70]
gi|149011426|ref|ZP_01832673.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP19-BS75]
gi|149020788|ref|ZP_01835317.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP23-BS72]
gi|168487543|ref|ZP_02712051.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC1087-00]
gi|168491409|ref|ZP_02715552.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC0288-04]
gi|168493616|ref|ZP_02717759.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC3059-06]
gi|168575101|ref|ZP_02721064.1| GTP-binding protein EngA [Streptococcus pneumoniae MLV-016]
gi|169832823|ref|YP_001695085.1| GTP-binding protein EngA [Streptococcus pneumoniae Hungary19A-6]
gi|182684651|ref|YP_001836398.1| GTP-binding protein EngA [Streptococcus pneumoniae CGSP14]
gi|194398265|ref|YP_002038320.1| GTP-binding protein EngA [Streptococcus pneumoniae G54]
gi|221232445|ref|YP_002511598.1| GTP-binding protein EngA [Streptococcus pneumoniae ATCC 700669]
gi|225855139|ref|YP_002736651.1| GTP-binding protein EngA [Streptococcus pneumoniae JJA]
gi|225857322|ref|YP_002738833.1| GTP-binding protein EngA [Streptococcus pneumoniae P1031]
gi|225859462|ref|YP_002740972.1| GTP-binding protein EngA [Streptococcus pneumoniae 70585]
gi|225861533|ref|YP_002743042.1| GTP-binding protein EngA [Streptococcus pneumoniae Taiwan19F-14]
gi|237649250|ref|ZP_04523502.1| GTP-binding protein EngA [Streptococcus pneumoniae CCRI 1974]
gi|237822010|ref|ZP_04597855.1| GTP-binding protein EngA [Streptococcus pneumoniae CCRI 1974M2]
gi|289167434|ref|YP_003445703.1| phosphoglycerate dehydrogenase-related protein, GTP-binding protein
[Streptococcus mitis B6]
gi|298229308|ref|ZP_06962989.1| GTP-binding protein EngA [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255748|ref|ZP_06979334.1| GTP-binding protein EngA [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298503453|ref|YP_003725393.1| GTP-binding protein EngA [Streptococcus pneumoniae TCH8431/19A]
gi|303254319|ref|ZP_07340427.1| GTP-binding protein EngA [Streptococcus pneumoniae BS455]
gi|303258643|ref|ZP_07344623.1| GTP-binding protein EngA [Streptococcus pneumoniae SP-BS293]
gi|303261806|ref|ZP_07347752.1| GTP-binding protein EngA [Streptococcus pneumoniae SP14-BS292]
gi|303263670|ref|ZP_07349592.1| GTP-binding protein EngA [Streptococcus pneumoniae BS397]
gi|303266846|ref|ZP_07352725.1| GTP-binding protein EngA [Streptococcus pneumoniae BS457]
gi|303269910|ref|ZP_07355651.1| GTP-binding protein EngA [Streptococcus pneumoniae BS458]
gi|307068334|ref|YP_003877300.1| putative GTPase [Streptococcus pneumoniae AP200]
gi|307705427|ref|ZP_07642284.1| small GTP-binding domain protein [Streptococcus mitis SK597]
gi|307707485|ref|ZP_07643967.1| GTP-binding protein EngA [Streptococcus mitis NCTC 12261]
gi|307709642|ref|ZP_07646094.1| small GTP-binding domain protein [Streptococcus mitis SK564]
gi|322377454|ref|ZP_08051945.1| ribosome-associated GTPase EngA [Streptococcus sp. M334]
gi|383938336|ref|ZP_09991550.1| ribosome-associated GTPase EngA [Streptococcus pseudopneumoniae
SK674]
gi|385262860|ref|ZP_10040958.1| ribosome-associated GTPase EngA [Streptococcus sp. SK643]
gi|387626900|ref|YP_006063076.1| GTP-binding protein EngA [Streptococcus pneumoniae INV104]
gi|387759820|ref|YP_006066798.1| GTP-binding protein EngA [Streptococcus pneumoniae INV200]
gi|387788751|ref|YP_006253819.1| GTP-binding protein EngA [Streptococcus pneumoniae ST556]
gi|415700172|ref|ZP_11457886.1| small GTP-binding domain protein [Streptococcus pneumoniae 459-5]
gi|415750096|ref|ZP_11478040.1| small GTP-binding domain protein [Streptococcus pneumoniae SV35]
gi|415752909|ref|ZP_11479891.1| small GTP-binding domain protein [Streptococcus pneumoniae SV36]
gi|417313186|ref|ZP_12099898.1| GTP-binding protein engA [Streptococcus pneumoniae GA04375]
gi|417687157|ref|ZP_12336431.1| GTP-binding protein engA [Streptococcus pneumoniae GA41301]
gi|417696869|ref|ZP_12346047.1| GTP-binding protein engA [Streptococcus pneumoniae GA47368]
gi|417699088|ref|ZP_12348259.1| GTP-binding protein engA [Streptococcus pneumoniae GA41317]
gi|417846559|ref|ZP_12492552.1| ribosome-associated GTPase EngA [Streptococcus mitis SK1073]
gi|417923806|ref|ZP_12567263.1| ribosome-associated GTPase EngA [Streptococcus mitis SK569]
gi|418074534|ref|ZP_12711785.1| GTP-binding protein engA [Streptococcus pneumoniae GA11184]
gi|418076925|ref|ZP_12714158.1| GTPase Der [Streptococcus pneumoniae GA47502]
gi|418079132|ref|ZP_12716354.1| GTPase Der [Streptococcus pneumoniae 4027-06]
gi|418081330|ref|ZP_12718540.1| GTPase Der [Streptococcus pneumoniae 6735-05]
gi|418083513|ref|ZP_12720710.1| GTPase Der [Streptococcus pneumoniae GA44288]
gi|418085701|ref|ZP_12722880.1| GTPase Der [Streptococcus pneumoniae GA47281]
gi|418087381|ref|ZP_12724550.1| GTPase Der [Streptococcus pneumoniae GA47033]
gi|418090066|ref|ZP_12727220.1| GTPase Der [Streptococcus pneumoniae GA43265]
gi|418092311|ref|ZP_12729451.1| GTPase Der [Streptococcus pneumoniae GA44452]
gi|418094499|ref|ZP_12731626.1| GTPase Der [Streptococcus pneumoniae GA49138]
gi|418099031|ref|ZP_12736128.1| GTPase Der [Streptococcus pneumoniae 6901-05]
gi|418101167|ref|ZP_12738250.1| GTPase Der [Streptococcus pneumoniae 7286-06]
gi|418103398|ref|ZP_12740470.1| GTPase Der [Streptococcus pneumoniae NP070]
gi|418105811|ref|ZP_12742867.1| GTPase Der [Streptococcus pneumoniae GA44500]
gi|418108138|ref|ZP_12745175.1| GTPase Der [Streptococcus pneumoniae GA41410]
gi|418110675|ref|ZP_12747694.1| GTPase Der [Streptococcus pneumoniae GA49447]
gi|418115224|ref|ZP_12752210.1| GTPase Der [Streptococcus pneumoniae 5787-06]
gi|418117383|ref|ZP_12754352.1| GTPase Der [Streptococcus pneumoniae 6963-05]
gi|418119157|ref|ZP_12756114.1| GTPase Der [Streptococcus pneumoniae GA18523]
gi|418121764|ref|ZP_12758707.1| GTPase Der [Streptococcus pneumoniae GA44194]
gi|418124033|ref|ZP_12760964.1| GTPase Der [Streptococcus pneumoniae GA44378]
gi|418128577|ref|ZP_12765470.1| GTPase Der [Streptococcus pneumoniae NP170]
gi|418130856|ref|ZP_12767739.1| GTPase Der [Streptococcus pneumoniae GA07643]
gi|418134645|ref|ZP_12771502.1| GTPase Der [Streptococcus pneumoniae GA11426]
gi|418137773|ref|ZP_12774611.1| GTP-binding protein engA [Streptococcus pneumoniae GA11663]
gi|418140033|ref|ZP_12776858.1| GTPase Der [Streptococcus pneumoniae GA13338]
gi|418142223|ref|ZP_12779035.1| GTP-binding protein engA [Streptococcus pneumoniae GA13455]
gi|418144658|ref|ZP_12781453.1| GTP-binding protein engA [Streptococcus pneumoniae GA13494]
gi|418146948|ref|ZP_12783726.1| GTP-binding protein engA [Streptococcus pneumoniae GA13637]
gi|418149065|ref|ZP_12785827.1| GTP-binding protein engA [Streptococcus pneumoniae GA13856]
gi|418151216|ref|ZP_12787962.1| GTP-binding protein engA [Streptococcus pneumoniae GA14798]
gi|418153449|ref|ZP_12790187.1| GTP-binding protein engA [Streptococcus pneumoniae GA16121]
gi|418158007|ref|ZP_12794723.1| GTP-binding protein engA [Streptococcus pneumoniae GA16833]
gi|418160413|ref|ZP_12797112.1| GTP-binding protein engA [Streptococcus pneumoniae GA17227]
gi|418165003|ref|ZP_12801671.1| GTP-binding protein engA [Streptococcus pneumoniae GA17371]
gi|418167308|ref|ZP_12803963.1| GTP-binding protein engA [Streptococcus pneumoniae GA17971]
gi|418169808|ref|ZP_12806449.1| GTP-binding protein engA [Streptococcus pneumoniae GA19077]
gi|418171844|ref|ZP_12808468.1| GTP-binding protein engA [Streptococcus pneumoniae GA19451]
gi|418174099|ref|ZP_12810711.1| GTP-binding protein engA [Streptococcus pneumoniae GA41277]
gi|418178754|ref|ZP_12815337.1| GTP-binding protein engA [Streptococcus pneumoniae GA41565]
gi|418181063|ref|ZP_12817632.1| GTP-binding protein engA [Streptococcus pneumoniae GA41688]
gi|418183246|ref|ZP_12819803.1| GTP-binding protein engA [Streptococcus pneumoniae GA43380]
gi|418185464|ref|ZP_12822005.1| GTP-binding protein engA [Streptococcus pneumoniae GA47283]
gi|418187687|ref|ZP_12824210.1| GTPase Der [Streptococcus pneumoniae GA47360]
gi|418189944|ref|ZP_12826456.1| GTPase Der [Streptococcus pneumoniae GA47373]
gi|418194275|ref|ZP_12830764.1| GTPase Der [Streptococcus pneumoniae GA47439]
gi|418196365|ref|ZP_12832841.1| GTP-binding protein engA [Streptococcus pneumoniae GA47688]
gi|418198534|ref|ZP_12834992.1| GTP-binding protein engA [Streptococcus pneumoniae GA47778]
gi|418200530|ref|ZP_12836973.1| GTPase Der [Streptococcus pneumoniae GA47976]
gi|418202916|ref|ZP_12839345.1| GTP-binding protein engA [Streptococcus pneumoniae GA52306]
gi|418217152|ref|ZP_12843832.1| GTP-binding protein engA [Streptococcus pneumoniae
Netherlands15B-37]
gi|418221739|ref|ZP_12848392.1| GTPase Der [Streptococcus pneumoniae GA47751]
gi|418223908|ref|ZP_12850548.1| GTPase Der [Streptococcus pneumoniae 5185-06]
gi|418228214|ref|ZP_12854831.1| GTPase Der [Streptococcus pneumoniae 3063-00]
gi|418230481|ref|ZP_12857080.1| GTPase Der [Streptococcus pneumoniae EU-NP01]
gi|418967964|ref|ZP_13519594.1| ribosome-associated GTPase EngA [Streptococcus mitis SK616]
gi|418972679|ref|ZP_13520758.1| ribosome-associated GTPase EngA [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|418977978|ref|ZP_13525784.1| ribosome-associated GTPase EngA [Streptococcus mitis SK575]
gi|419423693|ref|ZP_13963906.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA43264]
gi|419425649|ref|ZP_13965845.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae 7533-05]
gi|419427761|ref|ZP_13967942.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae 5652-06]
gi|419429907|ref|ZP_13970071.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA11856]
gi|419432082|ref|ZP_13972215.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae EU-NP05]
gi|419433985|ref|ZP_13974103.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA40183]
gi|419436504|ref|ZP_13976591.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae 8190-05]
gi|419438747|ref|ZP_13978815.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA13499]
gi|419440893|ref|ZP_13980938.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA40410]
gi|419443208|ref|ZP_13983234.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA13224]
gi|419445212|ref|ZP_13985227.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA19923]
gi|419447366|ref|ZP_13987371.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae 7879-04]
gi|419449492|ref|ZP_13989488.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae 4075-00]
gi|419450912|ref|ZP_13990898.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae EU-NP02]
gi|419453631|ref|ZP_13993601.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae EU-NP03]
gi|419456058|ref|ZP_13996015.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae EU-NP04]
gi|419458298|ref|ZP_13998240.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA02254]
gi|419464869|ref|ZP_14004760.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA04175]
gi|419469508|ref|ZP_14009376.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA06083]
gi|419471594|ref|ZP_14011453.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA07914]
gi|419473762|ref|ZP_14013611.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA13430]
gi|419476037|ref|ZP_14015873.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA14688]
gi|419478348|ref|ZP_14018171.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA18068]
gi|419482745|ref|ZP_14022532.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA40563]
gi|419487184|ref|ZP_14026946.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA44128]
gi|419489334|ref|ZP_14029083.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA44386]
gi|419491607|ref|ZP_14031345.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47179]
gi|419495892|ref|ZP_14035609.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47461]
gi|419498075|ref|ZP_14037782.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47522]
gi|419502360|ref|ZP_14042044.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47628]
gi|419504441|ref|ZP_14044109.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47760]
gi|419506589|ref|ZP_14046250.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA49194]
gi|419510971|ref|ZP_14050612.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae NP141]
gi|419515213|ref|ZP_14054838.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae
England14-9]
gi|419519418|ref|ZP_14059024.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA08825]
gi|419521638|ref|ZP_14061233.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA05245]
gi|419523980|ref|ZP_14063555.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA13723]
gi|419528047|ref|ZP_14067590.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA17719]
gi|419530851|ref|ZP_14070377.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA40028]
gi|419532906|ref|ZP_14072421.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47794]
gi|419535168|ref|ZP_14074667.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA17457]
gi|421207142|ref|ZP_15664194.1| small GTP-binding domain protein [Streptococcus pneumoniae 2090008]
gi|421209474|ref|ZP_15666487.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070005]
gi|421211576|ref|ZP_15668558.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070035]
gi|421213646|ref|ZP_15670600.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070108]
gi|421215805|ref|ZP_15672726.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070109]
gi|421218348|ref|ZP_15675242.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070335]
gi|421225542|ref|ZP_15682280.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070768]
gi|421230321|ref|ZP_15686985.1| small GTP-binding domain protein [Streptococcus pneumoniae 2061376]
gi|421232411|ref|ZP_15689052.1| small GTP-binding domain protein [Streptococcus pneumoniae 2080076]
gi|421234596|ref|ZP_15691214.1| small GTP-binding domain protein [Streptococcus pneumoniae 2061617]
gi|421236796|ref|ZP_15693393.1| small GTP-binding domain protein [Streptococcus pneumoniae 2071004]
gi|421239036|ref|ZP_15695600.1| small GTP-binding domain protein [Streptococcus pneumoniae 2071247]
gi|421241170|ref|ZP_15697715.1| small GTP-binding domain protein [Streptococcus pneumoniae 2080913]
gi|421243641|ref|ZP_15700153.1| small GTP-binding domain protein [Streptococcus pneumoniae 2081074]
gi|421245545|ref|ZP_15702043.1| small GTP-binding domain protein [Streptococcus pneumoniae 2081685]
gi|421247978|ref|ZP_15704456.1| small GTP-binding domain protein [Streptococcus pneumoniae 2082170]
gi|421249937|ref|ZP_15706394.1| small GTP-binding domain protein [Streptococcus pneumoniae 2082239]
gi|421266703|ref|ZP_15717583.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae SPAR27]
gi|421268868|ref|ZP_15719737.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae SPAR95]
gi|421271120|ref|ZP_15721974.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae SPAR48]
gi|421273362|ref|ZP_15724202.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae SPAR55]
gi|421275420|ref|ZP_15726249.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA52612]
gi|421281696|ref|ZP_15732493.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA04672]
gi|421285759|ref|ZP_15736535.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA60190]
gi|421287974|ref|ZP_15738737.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA58771]
gi|421292579|ref|ZP_15743313.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA56348]
gi|421296541|ref|ZP_15747250.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA58581]
gi|421302824|ref|ZP_15753488.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA17484]
gi|421307902|ref|ZP_15758544.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA60132]
gi|421310110|ref|ZP_15760735.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA62681]
gi|421312517|ref|ZP_15763119.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA58981]
gi|421314582|ref|ZP_15765169.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47562]
gi|444382342|ref|ZP_21180545.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PCS8106]
gi|444385579|ref|ZP_21183651.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PCS8203]
gi|444409898|ref|ZP_21206477.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0076]
gi|444412854|ref|ZP_21209173.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0153]
gi|444422725|ref|ZP_21218370.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0446]
gi|54037053|sp|P64063.1|DER_STRR6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|54040976|sp|P64062.1|DER_STRPN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|122278180|sp|Q04J64.1|DER_STRP2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238688353|sp|B1I766.1|DER_STRPI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238690849|sp|B5E756.1|DER_STRP4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238691183|sp|B2IRW4.1|DER_STRPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783168|sp|C1C8U6.1|DER_STRP7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783169|sp|B8ZMH4.1|DER_STRPJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783171|sp|C1CFT0.1|DER_STRZJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783172|sp|C1CM45.1|DER_STRZP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783173|sp|C1CSX0.1|DER_STRZT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|14973204|gb|AAK75787.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae TIGR4]
gi|15459218|gb|AAL00357.1| Phosphoglycerate dehydrogenase [Streptococcus pneumoniae R6]
gi|116076455|gb|ABJ54175.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae D39]
gi|147756261|gb|EDK63303.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP11-BS70]
gi|147764416|gb|EDK71347.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP19-BS75]
gi|147925114|gb|EDK76194.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP6-BS73]
gi|147930429|gb|EDK81412.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP23-BS72]
gi|168995325|gb|ACA35937.1| GTP-binding protein EngA [Streptococcus pneumoniae Hungary19A-6]
gi|182629985|gb|ACB90933.1| GTP-binding protein EngA [Streptococcus pneumoniae CGSP14]
gi|183569654|gb|EDT90182.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC1087-00]
gi|183574158|gb|EDT94686.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC0288-04]
gi|183576280|gb|EDT96808.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC3059-06]
gi|183578800|gb|EDT99328.1| GTP-binding protein EngA [Streptococcus pneumoniae MLV-016]
gi|194357932|gb|ACF56380.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae G54]
gi|220674906|emb|CAR69481.1| GTP-binding protein EngA [Streptococcus pneumoniae ATCC 700669]
gi|225721482|gb|ACO17336.1| GTP-binding protein EngA [Streptococcus pneumoniae 70585]
gi|225723540|gb|ACO19393.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae JJA]
gi|225724777|gb|ACO20629.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae P1031]
gi|225727275|gb|ACO23126.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae
Taiwan19F-14]
gi|288907001|emb|CBJ21835.1| phosphoglycerate dehydrogenase-related protein, GTP-binding protein
[Streptococcus mitis B6]
gi|298239048|gb|ADI70179.1| GTP-binding protein EngA [Streptococcus pneumoniae TCH8431/19A]
gi|301794686|emb|CBW37137.1| GTP-binding protein EngA [Streptococcus pneumoniae INV104]
gi|301802409|emb|CBW35163.1| GTP-binding protein EngA [Streptococcus pneumoniae INV200]
gi|302598670|gb|EFL65708.1| GTP-binding protein EngA [Streptococcus pneumoniae BS455]
gi|302636889|gb|EFL67378.1| GTP-binding protein EngA [Streptococcus pneumoniae SP14-BS292]
gi|302640144|gb|EFL70599.1| GTP-binding protein EngA [Streptococcus pneumoniae SP-BS293]
gi|302640564|gb|EFL70970.1| GTP-binding protein EngA [Streptococcus pneumoniae BS458]
gi|302643614|gb|EFL73882.1| GTP-binding protein EngA [Streptococcus pneumoniae BS457]
gi|302646708|gb|EFL76933.1| GTP-binding protein EngA [Streptococcus pneumoniae BS397]
gi|306409871|gb|ADM85298.1| Predicted GTPase [Streptococcus pneumoniae AP200]
gi|307616437|gb|EFN95628.1| GTP-binding protein EngA [Streptococcus mitis NCTC 12261]
gi|307619540|gb|EFN98664.1| small GTP-binding domain protein [Streptococcus mitis SK564]
gi|307621026|gb|EFO00106.1| small GTP-binding domain protein [Streptococcus mitis SK597]
gi|321281654|gb|EFX58663.1| ribosome-associated GTPase EngA [Streptococcus sp. M334]
gi|327389894|gb|EGE88239.1| GTP-binding protein engA [Streptococcus pneumoniae GA04375]
gi|332074047|gb|EGI84525.1| GTP-binding protein engA [Streptococcus pneumoniae GA41301]
gi|332199734|gb|EGJ13809.1| GTP-binding protein engA [Streptococcus pneumoniae GA41317]
gi|332200267|gb|EGJ14340.1| GTP-binding protein engA [Streptococcus pneumoniae GA47368]
gi|339458192|gb|EGP70735.1| ribosome-associated GTPase EngA [Streptococcus mitis SK1073]
gi|342836688|gb|EGU70899.1| ribosome-associated GTPase EngA [Streptococcus mitis SK569]
gi|353746659|gb|EHD27319.1| GTPase Der [Streptococcus pneumoniae 4027-06]
gi|353747065|gb|EHD27723.1| GTPase Der [Streptococcus pneumoniae GA47502]
gi|353747135|gb|EHD27792.1| GTP-binding protein engA [Streptococcus pneumoniae GA11184]
gi|353752069|gb|EHD32700.1| GTPase Der [Streptococcus pneumoniae 6735-05]
gi|353754733|gb|EHD35345.1| GTPase Der [Streptococcus pneumoniae GA44288]
gi|353756410|gb|EHD37011.1| GTPase Der [Streptococcus pneumoniae GA47281]
gi|353758397|gb|EHD38989.1| GTPase Der [Streptococcus pneumoniae GA47033]
gi|353761257|gb|EHD41829.1| GTPase Der [Streptococcus pneumoniae GA43265]
gi|353763011|gb|EHD43568.1| GTPase Der [Streptococcus pneumoniae GA44452]
gi|353764995|gb|EHD45543.1| GTPase Der [Streptococcus pneumoniae GA49138]
gi|353769013|gb|EHD49535.1| GTPase Der [Streptococcus pneumoniae 6901-05]
gi|353770667|gb|EHD51179.1| GTPase Der [Streptococcus pneumoniae 7286-06]
gi|353774699|gb|EHD55186.1| GTPase Der [Streptococcus pneumoniae NP070]
gi|353775987|gb|EHD56466.1| GTPase Der [Streptococcus pneumoniae GA44500]
gi|353778415|gb|EHD58883.1| GTPase Der [Streptococcus pneumoniae GA41410]
gi|353781296|gb|EHD61741.1| GTPase Der [Streptococcus pneumoniae GA49447]
gi|353785308|gb|EHD65727.1| GTPase Der [Streptococcus pneumoniae 5787-06]
gi|353788064|gb|EHD68462.1| GTPase Der [Streptococcus pneumoniae 6963-05]
gi|353791109|gb|EHD71490.1| GTPase Der [Streptococcus pneumoniae GA18523]
gi|353792600|gb|EHD72972.1| GTPase Der [Streptococcus pneumoniae GA44194]
gi|353795853|gb|EHD76199.1| GTPase Der [Streptococcus pneumoniae GA44378]
gi|353799076|gb|EHD79399.1| GTPase Der [Streptococcus pneumoniae NP170]
gi|353802180|gb|EHD82480.1| GTPase Der [Streptococcus pneumoniae GA07643]
gi|353804456|gb|EHD84737.1| GTP-binding protein engA [Streptococcus pneumoniae GA13455]
gi|353807124|gb|EHD87396.1| GTP-binding protein engA [Streptococcus pneumoniae GA13494]
gi|353811401|gb|EHD91643.1| GTP-binding protein engA [Streptococcus pneumoniae GA13856]
gi|353812523|gb|EHD92758.1| GTP-binding protein engA [Streptococcus pneumoniae GA13637]
gi|353814426|gb|EHD94652.1| GTP-binding protein engA [Streptococcus pneumoniae GA14798]
gi|353817000|gb|EHD97208.1| GTP-binding protein engA [Streptococcus pneumoniae GA16121]
gi|353822146|gb|EHE02322.1| GTP-binding protein engA [Streptococcus pneumoniae GA17227]
gi|353824455|gb|EHE04629.1| GTP-binding protein engA [Streptococcus pneumoniae GA16833]
gi|353828835|gb|EHE08971.1| GTP-binding protein engA [Streptococcus pneumoniae GA17371]
gi|353829300|gb|EHE09434.1| GTP-binding protein engA [Streptococcus pneumoniae GA17971]
gi|353833787|gb|EHE13895.1| GTP-binding protein engA [Streptococcus pneumoniae GA19077]
gi|353835581|gb|EHE15675.1| GTP-binding protein engA [Streptococcus pneumoniae GA19451]
gi|353838055|gb|EHE18136.1| GTP-binding protein engA [Streptococcus pneumoniae GA41277]
gi|353842813|gb|EHE22859.1| GTP-binding protein engA [Streptococcus pneumoniae GA41565]
gi|353843135|gb|EHE23180.1| GTP-binding protein engA [Streptococcus pneumoniae GA41688]
gi|353847675|gb|EHE27695.1| GTP-binding protein engA [Streptococcus pneumoniae GA43380]
gi|353848748|gb|EHE28760.1| GTP-binding protein engA [Streptococcus pneumoniae GA47283]
gi|353849672|gb|EHE29677.1| GTPase Der [Streptococcus pneumoniae GA47360]
gi|353853671|gb|EHE33652.1| GTPase Der [Streptococcus pneumoniae GA47373]
gi|353857853|gb|EHE37815.1| GTPase Der [Streptococcus pneumoniae GA47439]
gi|353860376|gb|EHE40321.1| GTP-binding protein engA [Streptococcus pneumoniae GA47688]
gi|353861644|gb|EHE41579.1| GTP-binding protein engA [Streptococcus pneumoniae GA47778]
gi|353864071|gb|EHE43989.1| GTPase Der [Streptococcus pneumoniae GA47976]
gi|353867473|gb|EHE47368.1| GTP-binding protein engA [Streptococcus pneumoniae GA52306]
gi|353870425|gb|EHE50298.1| GTP-binding protein engA [Streptococcus pneumoniae
Netherlands15B-37]
gi|353875049|gb|EHE54903.1| GTPase Der [Streptococcus pneumoniae GA47751]
gi|353878706|gb|EHE58536.1| GTPase Der [Streptococcus pneumoniae 5185-06]
gi|353880609|gb|EHE60424.1| GTPase Der [Streptococcus pneumoniae 3063-00]
gi|353885362|gb|EHE65151.1| GTPase Der [Streptococcus pneumoniae EU-NP01]
gi|353900728|gb|EHE76279.1| GTP-binding protein engA [Streptococcus pneumoniae GA11663]
gi|353901882|gb|EHE77412.1| GTPase Der [Streptococcus pneumoniae GA11426]
gi|353904812|gb|EHE80262.1| GTPase Der [Streptococcus pneumoniae GA13338]
gi|379138493|gb|AFC95284.1| GTP-binding protein EngA [Streptococcus pneumoniae ST556]
gi|379529962|gb|EHY95203.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA02254]
gi|379536469|gb|EHZ01655.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA04175]
gi|379537154|gb|EHZ02339.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA13499]
gi|379538938|gb|EHZ04118.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA05245]
gi|379544312|gb|EHZ09457.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA06083]
gi|379546310|gb|EHZ11449.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA07914]
gi|379550085|gb|EHZ15187.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA11856]
gi|379550673|gb|EHZ15770.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA13224]
gi|379550926|gb|EHZ16022.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA13430]
gi|379556388|gb|EHZ21443.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA13723]
gi|379558819|gb|EHZ23851.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA14688]
gi|379563329|gb|EHZ28333.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA17457]
gi|379564860|gb|EHZ29855.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA18068]
gi|379566200|gb|EHZ31191.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA17719]
gi|379571260|gb|EHZ36218.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA40028]
gi|379572905|gb|EHZ37862.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA19923]
gi|379576986|gb|EHZ41910.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA40183]
gi|379577963|gb|EHZ42880.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA40410]
gi|379579337|gb|EHZ44244.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA40563]
gi|379585553|gb|EHZ50409.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA44128]
gi|379586265|gb|EHZ51119.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA43264]
gi|379586876|gb|EHZ51726.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA44386]
gi|379592969|gb|EHZ57784.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47179]
gi|379593978|gb|EHZ58789.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47461]
gi|379598908|gb|EHZ63693.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47522]
gi|379600573|gb|EHZ65354.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47628]
gi|379605426|gb|EHZ70177.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47794]
gi|379605829|gb|EHZ70579.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47760]
gi|379608503|gb|EHZ73249.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA49194]
gi|379612943|gb|EHZ77658.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae 8190-05]
gi|379614906|gb|EHZ79616.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae 7879-04]
gi|379617954|gb|EHZ82634.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae 5652-06]
gi|379619110|gb|EHZ83784.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae 7533-05]
gi|379622110|gb|EHZ86746.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae 4075-00]
gi|379622617|gb|EHZ87251.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae EU-NP02]
gi|379625701|gb|EHZ90327.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae EU-NP03]
gi|379628034|gb|EHZ92640.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae EU-NP04]
gi|379629163|gb|EHZ93764.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae EU-NP05]
gi|379631574|gb|EHZ96151.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae NP141]
gi|379635762|gb|EIA00321.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae
England14-9]
gi|379641255|gb|EIA05793.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA08825]
gi|381308556|gb|EIC49399.1| small GTP-binding domain protein [Streptococcus pneumoniae SV36]
gi|381314868|gb|EIC55634.1| small GTP-binding domain protein [Streptococcus pneumoniae 459-5]
gi|381318390|gb|EIC59115.1| small GTP-binding domain protein [Streptococcus pneumoniae SV35]
gi|383341677|gb|EID19930.1| ribosome-associated GTPase EngA [Streptococcus mitis SK616]
gi|383348794|gb|EID26748.1| ribosome-associated GTPase EngA [Streptococcus mitis SK575]
gi|383351515|gb|EID29308.1| ribosome-associated GTPase EngA [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383714829|gb|EID70821.1| ribosome-associated GTPase EngA [Streptococcus pseudopneumoniae
SK674]
gi|385189355|gb|EIF36820.1| ribosome-associated GTPase EngA [Streptococcus sp. SK643]
gi|395572684|gb|EJG33279.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070035]
gi|395573570|gb|EJG34160.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070005]
gi|395574478|gb|EJG35056.1| small GTP-binding domain protein [Streptococcus pneumoniae 2090008]
gi|395578877|gb|EJG39387.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070108]
gi|395580012|gb|EJG40507.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070109]
gi|395583117|gb|EJG43566.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070335]
gi|395589029|gb|EJG49351.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070768]
gi|395593847|gb|EJG54089.1| small GTP-binding domain protein [Streptococcus pneumoniae 2061376]
gi|395594914|gb|EJG55149.1| small GTP-binding domain protein [Streptococcus pneumoniae 2080076]
gi|395600450|gb|EJG60607.1| small GTP-binding domain protein [Streptococcus pneumoniae 2061617]
gi|395600679|gb|EJG60834.1| small GTP-binding domain protein [Streptococcus pneumoniae 2071247]
gi|395601559|gb|EJG61706.1| small GTP-binding domain protein [Streptococcus pneumoniae 2071004]
gi|395606290|gb|EJG66397.1| small GTP-binding domain protein [Streptococcus pneumoniae 2081074]
gi|395607548|gb|EJG67645.1| small GTP-binding domain protein [Streptococcus pneumoniae 2080913]
gi|395608072|gb|EJG68168.1| small GTP-binding domain protein [Streptococcus pneumoniae 2081685]
gi|395612852|gb|EJG72886.1| small GTP-binding domain protein [Streptococcus pneumoniae 2082170]
gi|395613631|gb|EJG73659.1| small GTP-binding domain protein [Streptococcus pneumoniae 2082239]
gi|395866771|gb|EJG77899.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae SPAR27]
gi|395867334|gb|EJG78458.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae SPAR48]
gi|395869122|gb|EJG80238.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae SPAR95]
gi|395873384|gb|EJG84476.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA52612]
gi|395873793|gb|EJG84883.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae SPAR55]
gi|395880961|gb|EJG92012.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA04672]
gi|395885746|gb|EJG96767.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA60190]
gi|395886537|gb|EJG97553.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA58771]
gi|395891886|gb|EJH02880.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA56348]
gi|395895414|gb|EJH06389.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA58581]
gi|395901446|gb|EJH12382.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA17484]
gi|395907287|gb|EJH18181.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA60132]
gi|395909371|gb|EJH20247.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA58981]
gi|395909725|gb|EJH20600.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA62681]
gi|395913267|gb|EJH24120.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47562]
gi|444249649|gb|ELU56137.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PCS8203]
gi|444252616|gb|ELU59078.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PCS8106]
gi|444274093|gb|ELU79748.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0153]
gi|444278575|gb|ELU84015.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0076]
gi|444287943|gb|ELU92849.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0446]
Length = 436
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|148994026|ref|ZP_01823382.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP9-BS68]
gi|168484900|ref|ZP_02709845.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC1873-00]
gi|168488574|ref|ZP_02712773.1| GTP-binding protein EngA [Streptococcus pneumoniae SP195]
gi|307127923|ref|YP_003879954.1| GTP-binding protein EngA [Streptococcus pneumoniae 670-6B]
gi|417677440|ref|ZP_12326847.1| GTP-binding protein engA [Streptococcus pneumoniae GA17545]
gi|417679673|ref|ZP_12329069.1| GTP-binding protein engA [Streptococcus pneumoniae GA17570]
gi|418096818|ref|ZP_12733929.1| GTPase Der [Streptococcus pneumoniae GA16531]
gi|418113054|ref|ZP_12750054.1| GTPase Der [Streptococcus pneumoniae GA41538]
gi|418126361|ref|ZP_12763266.1| GTPase Der [Streptococcus pneumoniae GA44511]
gi|418133165|ref|ZP_12770036.1| GTPase Der [Streptococcus pneumoniae GA11304]
gi|418155698|ref|ZP_12792425.1| GTP-binding protein engA [Streptococcus pneumoniae GA16242]
gi|418162751|ref|ZP_12799432.1| GTP-binding protein engA [Streptococcus pneumoniae GA17328]
gi|418176495|ref|ZP_12813086.1| GTP-binding protein engA [Streptococcus pneumoniae GA41437]
gi|418192148|ref|ZP_12828650.1| GTPase Der [Streptococcus pneumoniae GA47388]
gi|418214904|ref|ZP_12841638.1| GTPase Der [Streptococcus pneumoniae GA54644]
gi|418219435|ref|ZP_12846100.1| GTPase Der [Streptococcus pneumoniae NP127]
gi|418226096|ref|ZP_12852724.1| GTPase Der [Streptococcus pneumoniae NP112]
gi|418234907|ref|ZP_12861483.1| GTPase Der [Streptococcus pneumoniae GA08780]
gi|418239232|ref|ZP_12865783.1| GTPase Der [Streptococcus pneumoniae NorthCarolina6A-23]
gi|419460520|ref|ZP_14000448.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA02270]
gi|419462870|ref|ZP_14002773.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA02714]
gi|419467326|ref|ZP_14007207.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA05248]
gi|419484937|ref|ZP_14024712.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA43257]
gi|419493835|ref|ZP_14033560.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47210]
gi|419508805|ref|ZP_14048456.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA49542]
gi|419513104|ref|ZP_14052736.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA05578]
gi|419517311|ref|ZP_14056927.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA02506]
gi|419526421|ref|ZP_14065979.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA14373]
gi|421220791|ref|ZP_15677630.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070425]
gi|421223046|ref|ZP_15679828.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070531]
gi|421279483|ref|ZP_15730289.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA17301]
gi|421283850|ref|ZP_15734636.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA04216]
gi|421290270|ref|ZP_15741020.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA54354]
gi|421294729|ref|ZP_15745450.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA56113]
gi|421299171|ref|ZP_15749858.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA60080]
gi|421301561|ref|ZP_15752231.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA19998]
gi|421305663|ref|ZP_15756317.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA62331]
gi|147927493|gb|EDK78521.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP9-BS68]
gi|172041949|gb|EDT49995.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC1873-00]
gi|183572668|gb|EDT93196.1| GTP-binding protein EngA [Streptococcus pneumoniae SP195]
gi|306484985|gb|ADM91854.1| GTP-binding protein EngA [Streptococcus pneumoniae 670-6B]
gi|332072538|gb|EGI83021.1| GTP-binding protein engA [Streptococcus pneumoniae GA17570]
gi|332072881|gb|EGI83362.1| GTP-binding protein engA [Streptococcus pneumoniae GA17545]
gi|353768539|gb|EHD49063.1| GTPase Der [Streptococcus pneumoniae GA16531]
gi|353783416|gb|EHD63845.1| GTPase Der [Streptococcus pneumoniae GA41538]
gi|353795425|gb|EHD75773.1| GTPase Der [Streptococcus pneumoniae GA44511]
gi|353805048|gb|EHD85326.1| GTPase Der [Streptococcus pneumoniae GA11304]
gi|353819947|gb|EHE00136.1| GTP-binding protein engA [Streptococcus pneumoniae GA16242]
gi|353826813|gb|EHE06970.1| GTP-binding protein engA [Streptococcus pneumoniae GA17328]
gi|353840566|gb|EHE20630.1| GTP-binding protein engA [Streptococcus pneumoniae GA41437]
gi|353855234|gb|EHE35204.1| GTPase Der [Streptococcus pneumoniae GA47388]
gi|353869634|gb|EHE49515.1| GTPase Der [Streptococcus pneumoniae GA54644]
gi|353873795|gb|EHE53654.1| GTPase Der [Streptococcus pneumoniae NP127]
gi|353881293|gb|EHE61107.1| GTPase Der [Streptococcus pneumoniae NP112]
gi|353886529|gb|EHE66311.1| GTPase Der [Streptococcus pneumoniae GA08780]
gi|353892223|gb|EHE71972.1| GTPase Der [Streptococcus pneumoniae NorthCarolina6A-23]
gi|379530302|gb|EHY95542.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA02714]
gi|379530656|gb|EHY95895.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA02270]
gi|379543073|gb|EHZ08225.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA05248]
gi|379557061|gb|EHZ22108.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA14373]
gi|379581690|gb|EHZ46574.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA43257]
gi|379592408|gb|EHZ57224.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47210]
gi|379610759|gb|EHZ75489.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA49542]
gi|379634269|gb|EHZ98834.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA05578]
gi|379639384|gb|EIA03928.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA02506]
gi|395586701|gb|EJG47068.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070425]
gi|395587026|gb|EJG47388.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070531]
gi|395878976|gb|EJG90038.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA17301]
gi|395880536|gb|EJG91588.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA04216]
gi|395887955|gb|EJG98969.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA54354]
gi|395893298|gb|EJH04285.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA56113]
gi|395899121|gb|EJH10065.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA19998]
gi|395900642|gb|EJH11580.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA60080]
gi|395904621|gb|EJH15535.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA62331]
Length = 436
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|417694582|ref|ZP_12343769.1| GTP-binding protein engA [Streptococcus pneumoniae GA47901]
gi|332201131|gb|EGJ15202.1| GTP-binding protein engA [Streptococcus pneumoniae GA47901]
Length = 436
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|423069935|ref|ZP_17058711.1| GTP-binding protein engA [Streptococcus intermedius F0413]
gi|355366256|gb|EHG13974.1| GTP-binding protein engA [Streptococcus intermedius F0413]
Length = 436
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 190/312 (60%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATAEWLNRKFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIRHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S+I G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-SEIFDFYALGLGEPYPVSSIHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L K E++VE + I +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIVENLPK----EEVVENPDMI-KFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|322386141|ref|ZP_08059775.1| ribosome-associated GTPase EngA [Streptococcus cristatus ATCC
51100]
gi|417922333|ref|ZP_12565821.1| ribosome-associated GTPase EngA [Streptococcus cristatus ATCC
51100]
gi|321269833|gb|EFX52759.1| ribosome-associated GTPase EngA [Streptococcus cristatus ATCC
51100]
gi|342832430|gb|EGU66725.1| ribosome-associated GTPase EngA [Streptococcus cristatus ATCC
51100]
Length = 436
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 190/312 (60%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATADWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIYDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E++VE + I +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVENLPH----EEVVENPDMI-KFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|341821258|emb|CCC57611.1| GTP-binding protein EngA [Weissella thailandensis fsh4-2]
Length = 436
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 187/313 (59%), Gaps = 42/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
P VA+VGRPNVGKS +FNR+ G +IV D PG+TRDR+Y R+ W +EF L+DTGG
Sbjct: 3 FPVVAVVGRPNVGKSTIFNRIAGDRISIVEDTPGITRDRIYTRAEWLTNEFRLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I M P S I +QA AI+E+ VI+F+V
Sbjct: 61 ------------------IDMGDEPFM----------SQIVQQAEIAIDEADVIVFMVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ GLT ADE +A L ++ K ++LAVNK ++ + ++ EF++LGF P PIS G
Sbjct: 93 REGLTEADERVAKMLYRS--KKPVVLAVNKVDNIEQR-SEIYEFYALGFGDPYPISGAHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD V + VE E E+ + +GRPNVGKSS++NA++GE+R IVS
Sbjct: 150 TGLGDLLDQVVANFPDVEAPE-----EDDAVRFSFIGRPNVGKSSLVNAMLGEERVIVSD 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT FT +G +F ++DTAGIRKR + S TE SV RA RAI S+VV
Sbjct: 205 ISGTTRDAIDTRFTSEDGDEFVMVDTAGIRKRGKVYES---TEKYSVMRAMRAIDDSNVV 261
Query: 462 ALVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 262 LVVLNAEEGIREQ 274
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 47/215 (21%)
Query: 154 TIGNVPEHLLP------RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSF 207
+ N P+ P R + +GRPNVGKS+L N ++G R IV D G TRD + R F
Sbjct: 159 VVANFPDVEAPEEDDAVRFSFIGRPNVGKSSLVNAMLGEERVIVSDISGTTRDAIDTR-F 217
Query: 208 WGE--HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQ 265
E EF++VDT G+ + + + E +T + +V R
Sbjct: 218 TSEDGDEFVMVDTAGI----RKRGKVYE---------------STEKYSVMR-------- 250
Query: 266 ATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS- 324
A AI++S V++ +++ + G+ D+ +A + + + +I+ VNK ++ K ++
Sbjct: 251 AMRAIDDSNVVLVVLNAEEGIREQDKHVAGYAHE--AGRAVIIVVNKWDTLEKDNHTMTD 308
Query: 325 -------EFWSLGFSPLP-ISAISGTGTGELLDLV 351
EF L ++P+ +SA++ +L L+
Sbjct: 309 FENQIRQEFQYLSYAPIVFVSALTKQRLNKLPALI 343
>gi|410657630|ref|YP_006910001.1| GTP-binding protein EngA [Dehalobacter sp. DCA]
gi|410660665|ref|YP_006913036.1| GTP-binding protein EngA [Dehalobacter sp. CF]
gi|409019985|gb|AFV02016.1| GTP-binding protein EngA [Dehalobacter sp. DCA]
gi|409023021|gb|AFV05051.1| GTP-binding protein EngA [Dehalobacter sp. CF]
Length = 443
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 194/312 (62%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+VGG AIV + PGVTRDR+Y + W +F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIVGGLVAIVENTPGVTRDRLYYDAEWLGRKFTLIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
++ P + S +++QA A++E+ VI+FLVD +
Sbjct: 64 KDETTP----------------------------LSSKMKQQAEIAVDEADVIMFLVDAK 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+G+T D++IA +LRK+ K ++L NK E + + EF LGF P+P+SA+ G
Sbjct: 96 SGITPDDQQIARYLRKS--SKPVLLVANKVEKFTRFEAEAHEFLPLGFGDPIPVSAVHGM 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
TG+LLD + S L + + + + + IA++GRPNVGKSSI+N L+GE+R IVS I
Sbjct: 154 NTGDLLDTLVSVLPE----DAAADYDPDVIKIAVIGRPNVGKSSIVNILLGEERVIVSDI 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT FT E + + LIDTAGIR++ I+ TE SV R+FRA+ RSDVV
Sbjct: 210 PGTTRDAIDTPFTY-EDRNYVLIDTAGIRRKKKIS---EVTENYSVVRSFRAVDRSDVVL 265
Query: 463 LVIEAMACITEQ 474
+VI A+ +T+Q
Sbjct: 266 MVINAIEGVTDQ 277
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 93/196 (47%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++GRPNVGKS++ N L+G R IV D PG TRD + + + ++L+DT G+
Sbjct: 180 KIAVIGRPNVGKSSIVNILLGEERVIVSDIPGTTRDAIDTPFTYEDRNYVLIDTAGIRRK 239
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I T +V R + A++ S V++ +++
Sbjct: 240 KK-------------------ISEVTENYSVVR--------SFRAVDRSDVVLMVINAIE 272
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSPLP- 335
G+T D++I + + K +IL +NK + K ++++ + ++P
Sbjct: 273 GVTDQDKKIVGYAHE--AGKGLILVINKWDLVIKDEKTINKYEKDIREELAFVLYAPTQF 330
Query: 336 ISAISGTGTGELLDLV 351
+SA +G +++DLV
Sbjct: 331 VSAKTGQRINKIMDLV 346
>gi|422848049|ref|ZP_16894725.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK115]
gi|325690931|gb|EGD32931.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK115]
Length = 436
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 190/312 (60%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATASWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E++VE + I +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVENLP----NEEVVENPDMI-KFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|406586966|ref|ZP_11061883.1| GTP-binding protein Der [Streptococcus sp. GMD1S]
gi|419817488|ref|ZP_14341647.1| GTP-binding protein Der [Streptococcus sp. GMD4S]
gi|404465874|gb|EKA11257.1| GTP-binding protein Der [Streptococcus sp. GMD4S]
gi|404473538|gb|EKA17872.1| GTP-binding protein Der [Streptococcus sp. GMD1S]
Length = 436
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 143/315 (45%), Positives = 189/315 (60%), Gaps = 48/315 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG++LD + VE VEEEN + +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAI------VENLPHEVEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SP++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RS
Sbjct: 202 ASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRS 258
Query: 459 DVVALVIEAMACITE 473
DVV +V+ A I E
Sbjct: 259 DVVLMVLNAEEGIRE 273
>gi|401684413|ref|ZP_10816292.1| ribosome-associated GTPase EngA [Streptococcus sp. BS35b]
gi|400185657|gb|EJO19883.1| ribosome-associated GTPase EngA [Streptococcus sp. BS35b]
Length = 436
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 143/315 (45%), Positives = 189/315 (60%), Gaps = 48/315 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIRHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG++LD + VE + VEEEN + +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAI------VENLPNEVEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SP++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RS
Sbjct: 202 ASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRS 258
Query: 459 DVVALVIEAMACITE 473
DVV +V+ A I E
Sbjct: 259 DVVLMVLNAEEGIRE 273
>gi|449015597|dbj|BAM78999.1| GTP-binding protein of engA family [Cyanidioschyzon merolae strain
10D]
Length = 668
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 180/457 (39%), Positives = 241/457 (52%), Gaps = 66/457 (14%)
Query: 37 RSFSPQLLSLSLHKHYPLPLPLTRHLRSLSPSNDAVSSSNDDAFEDSPFEDEDDDAEYED 96
R + +L + S HK LP S + V S+DD S + D A +
Sbjct: 82 RVATARLKASSTHKESNLP----------SSRQELVPKSSDDPAAASALRN-DAQATSPE 130
Query: 97 VDDESDGQDFGIDVDALEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKT-TI 155
D E D G+ + R A D V E S+ + + ET R ++ +R T
Sbjct: 131 TDTEPS-SDAGLSEN---RTASDGVTEDLSIRG-EAVTSAETGLRDETSPAAAERSAATS 185
Query: 156 GNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNR--AIVVDEPGVTRDRMYGRSFWGEHEF 213
G + LP VA++GRPNVGKS L NR+ G R A+V D PGVTRDR Y + W F
Sbjct: 186 GVYRKSSLPLVAVIGRPNVGKSMLVNRISGTFRTGAVVEDTPGVTRDRTYQLANWSGRHF 245
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
+VDTGG+ + ED T G IP I +QA A+ E+
Sbjct: 246 RVVDTGGL---------VFED-----TPGDVFIP-------------QIRQQALIALREA 278
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFI-------ILAVNKCESPRKGIMQVSEF 326
V++ +VDGQ G+T D++IA +LRK + I ++AVNKCES G Q +EF
Sbjct: 279 DVVVLVVDGQQGVTTLDQDIAVFLRKTCDARGILGRRIPIVVAVNKCESQTMGEAQAAEF 338
Query: 327 WSLGF-SPLPISAISGTGTGELLDLVCSELKKV--EGTEDLVEEENRIPAIAIVGRPNVG 383
W LG PL IS+I G+G ELLD VC L + E L+ +E+ + +AI+GRPNVG
Sbjct: 339 WELGLGQPLAISSIHGSGVAELLDEVCYYLPNHGDDQEEALLSQESGMRRVAIIGRPNVG 398
Query: 384 KSSILNALVGEDRTIVSPISGTTRDAIDTEF------TGPEGQKFRLIDTAGIRKRAAIA 437
KSS+LNAL+GE+R IVS + GTTRDAID TG E + LIDTAGIR++ +
Sbjct: 399 KSSLLNALLGEERVIVSAVPGTTRDAIDELLIQRDPRTGRE-TCYLLIDTAGIRRKKNVE 457
Query: 438 SSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQ 474
TE +NRAF+AIRR+DVV LV++ IT+Q
Sbjct: 458 YG---TEFFMINRAFKAIRRADVVLLVLDMEEGITDQ 491
>gi|319938676|ref|ZP_08013040.1| GTP-binding protein engA [Streptococcus anginosus 1_2_62CV]
gi|319811726|gb|EFW07992.1| GTP-binding protein engA [Streptococcus anginosus 1_2_62CV]
Length = 436
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 138/314 (43%), Positives = 189/314 (60%), Gaps = 46/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATADWLNRKFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-SEIFDFYALGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTE--DLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
GTG++LD + L E E D+++ +++GRPNVGKSS++NA++GEDR I
Sbjct: 150 IGTGDVLDAIVENLPNEEAAENTDMIK-------FSLIGRPNVGKSSLINAILGEDRVIA 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SP++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD
Sbjct: 203 SPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSD 259
Query: 460 VVALVIEAMACITE 473
VV +V+ A I E
Sbjct: 260 VVLMVLNAEEGIRE 273
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 371 IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPE--GQKFRLIDTA 428
+P IAIVGRPNVGKS++ N + GE +IV + G TRD I + + +KF +IDT
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRI---YATADWLNRKFSMIDTG 59
Query: 429 GIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQADW 477
GI A E + ++A A+ +DV+ V+ IT+ ++
Sbjct: 60 GIDDVDA-----PFMEQIK-HQAEIAMEEADVIVFVVSGKEGITDADEY 102
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSE------FWSLGFSPLP 335
G+ D+ IA + + K II+ VNK ++ K MQ E F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTLEKDNKTMQNWEADIRDQFQYLSYAPIV 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L +++
Sbjct: 327 FVSALTKQRLHKLPEMI 343
>gi|430750090|ref|YP_007212998.1| ribosome-associated GTPase EngA [Thermobacillus composti KWC4]
gi|430734055|gb|AGA58000.1| ribosome-associated GTPase EngA [Thermobacillus composti KWC4]
Length = 440
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 147/312 (47%), Positives = 195/312 (62%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR++G AIV D+PGVTRDR+YG S W F +VDTGG
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIIGDRLAIVEDKPGVTRDRIYGTSEWNGKTFSIVDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I G E + + QA AI+E+ I+F+VDG+
Sbjct: 61 -------------IEIDAGDE-------------IMRSVRAQAELAIDEADTIVFMVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT ADEE+A L ++ K +++AVNK ++P + I + EF+SLGF P+ IS GT
Sbjct: 95 AGLTHADEEVARLLFRS--GKPVVVAVNKVDNPGR-IDSIYEFYSLGFGDPIAISGSHGT 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G +LLD V L E +E+ E ++ + +A++GRPNVGKSS++NA++GE+R IVS +
Sbjct: 152 GISDLLDRVVEALP--EPSEE--EYDDDVIRVALIGRPNVGKSSLVNAILGEERVIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F +G+KF LIDTAG+RKR I TTE SV R+ +AI RSDVV
Sbjct: 208 AGTTRDAIDTPFE-KDGRKFVLIDTAGMRKRGKIY---ETTEKYSVLRSLKAIERSDVVL 263
Query: 463 LVIEAMACITEQ 474
++I A I EQ
Sbjct: 264 VLINAEEGIIEQ 275
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G R IV D G TRD + +F+L+DT G+
Sbjct: 178 RVALIGRPNVGKSSLVNAILGEERVIVSDVAGTTRDAIDTPFEKDGRKFVLIDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + I E T + +V R + AIE S V++ L++ +
Sbjct: 235 -RKRGKIYE---------------TTEKYSVLR--------SLKAIERSDVVLVLINAEE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + K +L VNK ++ K + +F
Sbjct: 271 GIIEQDKHIAGYAHE--AGKASVLVVNKWDAVEKDDKTMRQF 310
>gi|386578546|ref|YP_006074952.1| Small GTP-binding domain containing protein [Streptococcus suis
GZ1]
gi|292559009|gb|ADE32010.1| Small GTP-binding domain containing protein [Streptococcus suis
GZ1]
Length = 436
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 185/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L K +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSRILYKT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E EE I +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIIENLPAQEA-----EENPDIIKFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT PEGQ+F +IDTAG+RK + + TE SV RA RAI RSDV+
Sbjct: 205 VAGTTRDAIDTHFTDPEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIERSDVI 261
Query: 462 ALVIEAMACITE 473
+VI A I E
Sbjct: 262 LMVINAEEGIRE 273
>gi|417933697|ref|ZP_12577017.1| ribosome-associated GTPase EngA [Streptococcus mitis bv. 2 str.
F0392]
gi|340770267|gb|EGR92782.1| ribosome-associated GTPase EngA [Streptococcus mitis bv. 2 str.
F0392]
Length = 436
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 143/315 (45%), Positives = 189/315 (60%), Gaps = 48/315 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG++LD + VE VEEEN + +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAI------VENLPHEVEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SP++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RS
Sbjct: 202 ASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRS 258
Query: 459 DVVALVIEAMACITE 473
DVV +V+ A I E
Sbjct: 259 DVVLMVLNAEEGIRE 273
>gi|335030110|ref|ZP_08523607.1| ribosome-associated GTPase EngA [Streptococcus infantis SK1076]
gi|334267206|gb|EGL85672.1| ribosome-associated GTPase EngA [Streptococcus infantis SK1076]
Length = 436
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDIEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE VEEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPHEVEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFIMIDTAGMRKYGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +V+ A I E
Sbjct: 261 VLMVLNAEEGIRE 273
>gi|70726437|ref|YP_253351.1| GTP-binding protein EngA [Staphylococcus haemolyticus JCSC1435]
gi|123660249|sp|Q4L6I0.1|DER_STAHJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|68447161|dbj|BAE04745.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 436
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 145/314 (46%), Positives = 191/314 (60%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAIS 340
GLT +DE +A L K+ K ++LAVNK ++P R I +F+SLGF P PIS
Sbjct: 94 EGLTQSDEMVAQMLYKS--KKPVVLAVNKVDNPEMRNDIF---DFYSLGFGDPYPISGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G+LLD V E TED +E+ ++I+GRPNVGKSS++NA++GEDR IVS
Sbjct: 149 GLGLGDLLDEVVKHFD--EETEDSYDEDT--IRLSIIGRPNVGKSSLVNAILGEDRVIVS 204
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
++GTTRDA+DTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+V
Sbjct: 205 NVAGTTRDAVDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNV 260
Query: 461 VALVIEAMACITEQ 474
V +VI+A I EQ
Sbjct: 261 VLIVIDAEEGIIEQ 274
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G +R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAVDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLIVIDAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAVVIVVNKWDTVDKDSNTMKKF 309
>gi|422882863|ref|ZP_16929319.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK355]
gi|332358244|gb|EGJ36072.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK355]
Length = 436
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 190/312 (60%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATANWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E++VE + I +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVENLP----NEEVVENPDMI-KFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|293365923|ref|ZP_06612626.1| ribosome-associated GTPase EngA [Streptococcus oralis ATCC 35037]
gi|307702327|ref|ZP_07639285.1| small GTP-binding domain protein [Streptococcus oralis ATCC 35037]
gi|315613624|ref|ZP_07888531.1| ribosome-associated GTPase EngA [Streptococcus sanguinis ATCC
49296]
gi|291315601|gb|EFE56051.1| ribosome-associated GTPase EngA [Streptococcus oralis ATCC 35037]
gi|307624130|gb|EFO03109.1| small GTP-binding domain protein [Streptococcus oralis ATCC 35037]
gi|315314315|gb|EFU62360.1| ribosome-associated GTPase EngA [Streptococcus sanguinis ATCC
49296]
Length = 436
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 143/315 (45%), Positives = 189/315 (60%), Gaps = 48/315 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG++LD + VE VEEEN + +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAI------VENLPHEVEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SP++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RS
Sbjct: 202 ASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRS 258
Query: 459 DVVALVIEAMACITE 473
DVV +V+ A I E
Sbjct: 259 DVVLMVLNAEEGIRE 273
>gi|414158910|ref|ZP_11415202.1| GTPase Der [Streptococcus sp. F0441]
gi|410868893|gb|EKS16857.1| GTPase Der [Streptococcus sp. F0441]
Length = 436
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 143/315 (45%), Positives = 189/315 (60%), Gaps = 48/315 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG++LD + VE VEEEN + +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAI------VENLPHEVEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SP++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RS
Sbjct: 202 ASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRS 258
Query: 459 DVVALVIEAMACITE 473
DVV +V+ A I E
Sbjct: 259 DVVLMVLNAEEGIRE 273
>gi|332523593|ref|ZP_08399845.1| ribosome biogenesis GTPase Der [Streptococcus porcinus str.
Jelinkova 176]
gi|332314857|gb|EGJ27842.1| ribosome biogenesis GTPase Der [Streptococcus porcinus str.
Jelinkova 176]
Length = 436
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V+ A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVN------------------------------APFMEQIKHQAQIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILA+NK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVAKMLYRTH--KPVILAINKVDNPEMR-NDIYDFYSLGLGDPYPLSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E VE+ I +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVENLPVEE-----VEDNENIIRFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTSFTDSDGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+VI A I E
Sbjct: 262 LMVINAEEGIRE 273
>gi|322375706|ref|ZP_08050218.1| ribosome-associated GTPase EngA [Streptococcus sp. C300]
gi|321279414|gb|EFX56455.1| ribosome-associated GTPase EngA [Streptococcus sp. C300]
Length = 436
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 143/315 (45%), Positives = 189/315 (60%), Gaps = 48/315 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG++LD + VE VEEEN + +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAI------VENLPHEVEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SP++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RS
Sbjct: 202 ASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRS 258
Query: 459 DVVALVIEAMACITE 473
DVV +V+ A I E
Sbjct: 259 DVVLMVLNAEEGIRE 273
>gi|384045069|ref|YP_005493086.1| Ribosome-associated GTPase EngA [Bacillus megaterium WSH-002]
gi|345442760|gb|AEN87777.1| Ribosome-associated GTPase EngA [Bacillus megaterium WSH-002]
Length = 436
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 194/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W +F ++DTGG+
Sbjct: 4 PIIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSSGEWLNLDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I++QA AI+E+ VIIFLV+G+
Sbjct: 62 ----------------DIGDE--PFLEQ----------IKQQAEIAIDEADVIIFLVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L K+ K ++LAVNK ++P + + +F++LG+ P PIS G
Sbjct: 94 DGITAADEEVAKILYKS--KKPVVLAVNKVDNPEMREL-IYDFYALGYGEPFPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD K E ED EE + +++GRPNVGKSS++NAL+GEDR IVS +
Sbjct: 151 GLGDLLDEAAKHFPK-EKDEDYGEE---VIKFSLIGRPNVGKSSLVNALLGEDRVIVSDL 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT+FT E Q++ +IDTAG+RKR + S TE SV RA +AI RSDVV
Sbjct: 207 AGTTRDAIDTKFT-KEDQEYVVIDTAGMRKRGKVYES---TEKYSVLRALKAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 IVLNAEEGIIEQ 274
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N L+G +R IV D G TRD + + + E++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSLVNALLGEDRVIVSDLAGTTRDAIDTKFTKEDQEYVVIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ +++ +
Sbjct: 234 -RKRGKVYE---------------STEKYSVLR--------ALKAIERSDVVLIVLNAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE-----FWSLGFSPLP- 335
G+ D++IA + ++ K +++ VNK E K + + E F L ++P+
Sbjct: 270 GIIEQDKKIAGYAQE--AGKAVVIVVNKWDTVEKDEKTMKKFEENIREHFQFLTYAPIVF 327
Query: 336 ISAISGTGTGELLDLV 351
+SA + T LL ++
Sbjct: 328 LSAKTKKRTHTLLPMI 343
>gi|146319380|ref|YP_001199092.1| GTP-binding protein EngA [Streptococcus suis 05ZYH33]
gi|146321585|ref|YP_001201296.1| GTP-binding protein EngA [Streptococcus suis 98HAH33]
gi|253752406|ref|YP_003025547.1| GTP-binding protein EngA [Streptococcus suis SC84]
gi|253754232|ref|YP_003027373.1| GTP-binding protein EngA [Streptococcus suis P1/7]
gi|253756166|ref|YP_003029306.1| GTP-binding protein EngA [Streptococcus suis BM407]
gi|386580619|ref|YP_006077024.1| GTP-binding protein EngA [Streptococcus suis JS14]
gi|386582692|ref|YP_006079096.1| GTP-binding protein EngA [Streptococcus suis SS12]
gi|386586818|ref|YP_006083220.1| GTP-binding protein EngA [Streptococcus suis D12]
gi|386588815|ref|YP_006085216.1| GTP-binding protein EngA [Streptococcus suis A7]
gi|403062163|ref|YP_006650379.1| GTP-binding protein Der [Streptococcus suis S735]
gi|166225866|sp|A4W3F7.1|DER_STRS2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166225868|sp|A4VX53.1|DER_STRSY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|145690186|gb|ABP90692.1| Predicted GTPase [Streptococcus suis 05ZYH33]
gi|145692391|gb|ABP92896.1| Predicted GTPase [Streptococcus suis 98HAH33]
gi|251816695|emb|CAZ52336.1| GTP-binding protein EngA [Streptococcus suis SC84]
gi|251818630|emb|CAZ56464.1| GTP-binding protein EngA [Streptococcus suis BM407]
gi|251820478|emb|CAR47214.1| GTP-binding protein EngA [Streptococcus suis P1/7]
gi|319758811|gb|ADV70753.1| GTP-binding protein EngA [Streptococcus suis JS14]
gi|353734838|gb|AER15848.1| GTP-binding protein EngA [Streptococcus suis SS12]
gi|353738964|gb|AER19972.1| GTP-binding protein EngA [Streptococcus suis D12]
gi|354985976|gb|AER44874.1| GTP-binding protein EngA [Streptococcus suis A7]
gi|402809489|gb|AFR00981.1| GTP-binding protein Der [Streptococcus suis S735]
Length = 436
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 185/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L K +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSRILYKT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E EE I +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIIENLPAQEA-----EENPDIIKFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT PEGQ+F +IDTAG+RK + + TE SV RA RAI RSDV+
Sbjct: 205 VAGTTRDAIDTHFTDPEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIERSDVI 261
Query: 462 ALVIEAMACITE 473
+VI A I E
Sbjct: 262 LMVINAEEGIRE 273
>gi|331701406|ref|YP_004398365.1| GTP-binding protein engA [Lactobacillus buchneri NRRL B-30929]
gi|406026968|ref|YP_006725800.1| GTP-binding protein [Lactobacillus buchneri CD034]
gi|329128749|gb|AEB73302.1| GTP-binding protein engA [Lactobacillus buchneri NRRL B-30929]
gi|405125457|gb|AFS00218.1| GTP-binding protein [Lactobacillus buchneri CD034]
Length = 435
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 140/313 (44%), Positives = 188/313 (60%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA +GRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F ++DTGG
Sbjct: 3 LPTVAFIGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYSHGEWLATKFAMIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P AT+ I+ QA AI+E+ VI+F+V G
Sbjct: 61 ------------------IQISDAPFATQ----------IKSQAEIAIDEADVIVFIVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+TA DE++A L ++ DK ++LAVNK ++P + EF+SLGF P+PIS + G
Sbjct: 93 KEGVTAEDEQVAKILYRS--DKPVVLAVNKVDNPESR-EDIYEFYSLGFGDPMPISGVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G G+LLD V + K + D N +I+GRPNVGKSS++NA++GEDR IVS
Sbjct: 150 LGLGDLLDKVVEKFPKTDEKTD-----NDDIRFSIIGRPNVGKSSLVNAILGEDRVIVSD 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDAIDT F +G KF ++DTAGIRKR + + TE SV RA +AI +SDV+
Sbjct: 205 IAGTTRDAIDTRFEA-DGIKFTMVDTAGIRKRGKVYEN---TERYSVMRAMKAIDQSDVI 260
Query: 462 ALVIEAMACITEQ 474
V+ A I EQ
Sbjct: 261 LFVMNAEEGIREQ 273
>gi|418964452|ref|ZP_13516256.1| ribosome-associated GTPase EngA [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383340547|gb|EID18841.1| ribosome-associated GTPase EngA [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 436
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 138/314 (43%), Positives = 189/314 (60%), Gaps = 46/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATAEWLNRKFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-SEIFDFYALGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTE--DLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
GTG++LD + L E E D+++ +++GRPNVGKSS++NA++GEDR I
Sbjct: 150 IGTGDILDAIVENLPNEEAAENPDMIK-------FSLIGRPNVGKSSLINAILGEDRVIA 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SP++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD
Sbjct: 203 SPVAGTTRDAIDTVFTDNEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSD 259
Query: 460 VVALVIEAMACITE 473
VV +V+ A I E
Sbjct: 260 VVLMVLNAEEGIRE 273
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 371 IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPE--GQKFRLIDTA 428
+P IAIVGRPNVGKS++ N + GE +IV + G TRD I + E +KF +IDT
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRI---YATAEWLNRKFSMIDTG 59
Query: 429 GIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQADW 477
GI A E + ++A A+ +DV+ V+ IT+ ++
Sbjct: 60 GIDDVDA-----PFMEQIK-HQAEIAMEEADVIVFVVSGKEGITDADEY 102
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTVFTDNEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSE------FWSLGFSPL 334
G+ D+ IA + + K II+ VNK ++ K MQ E F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTLEKDNKTMQNWEADIRDQFQYLSYAPI 325
>gi|392330713|ref|ZP_10275328.1| GTP-binding protein EngA [Streptococcus canis FSL Z3-227]
gi|391418392|gb|EIQ81204.1| GTP-binding protein EngA [Streptococcus canis FSL Z3-227]
Length = 436
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 140/313 (44%), Positives = 186/313 (59%), Gaps = 42/313 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P PIS++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPISSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E EE + I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDVLDAIVENLPVEEA-----EENDDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|306824736|ref|ZP_07458080.1| ribosome-associated GTPase EngA [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304432947|gb|EFM35919.1| ribosome-associated GTPase EngA [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 436
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 143/315 (45%), Positives = 189/315 (60%), Gaps = 48/315 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG++LD + VE VEEEN + +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAI------VENLPHEVEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SP++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RS
Sbjct: 202 ASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRS 258
Query: 459 DVVALVIEAMACITE 473
DVV +V+ A I E
Sbjct: 259 DVVLMVLNAEEGIRE 273
>gi|323141760|ref|ZP_08076630.1| ribosome biogenesis GTPase Der [Phascolarctobacterium succinatutens
YIT 12067]
gi|322413749|gb|EFY04598.1| ribosome biogenesis GTPase Der [Phascolarctobacterium succinatutens
YIT 12067]
Length = 442
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 193/312 (61%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN +IV D PGVTRDR+Y + W +HEFM+VDTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNIFANSRISIVEDTPGVTRDRLYATAEWLDHEFMMVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IM AI + I +QA AI+E+ VI+F+ D +
Sbjct: 62 ------EIMNADAIAVS---------------------IRQQAQIAIKEADVILFVCDAR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+T D ++A LR++ K I+LAVNK +SP++ M EF++LG P+ +SA +
Sbjct: 95 AGITTEDADVARLLRQS--KKPIVLAVNKADSPKQE-MNTFEFYNLGIGDPIAVSASNHL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V ++ + DL EEE+ I +A++GRPNVGKSSI NALVGE+R+IVS I
Sbjct: 152 GLGDLLDAVVAKFPSDKMAGDL-EEEDEI-KVALIGRPNVGKSSIFNALVGEERSIVSDI 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT GQK+ IDTAG+R++A + E SV R+ RA+ RSDVV
Sbjct: 210 AGTTRDAIDTPVVR-NGQKYLFIDTAGMRRKAKV---DEPIEKYSVMRSLRAVDRSDVVL 265
Query: 463 LVIEAMACITEQ 474
+V +A+ +TEQ
Sbjct: 266 MVFDAVEGVTEQ 277
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 29/157 (18%)
Query: 156 GNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFML 215
G++ E +VA++GRPNVGKS++FN LVG R+IV D G TRD + +++
Sbjct: 171 GDLEEEDEIKVALIGRPNVGKSSIFNALVGEERSIVSDIAGTTRDAIDTPVVRNGQKYLF 230
Query: 216 VDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCV 275
+DT G+ +K I + +V R + A++ S V
Sbjct: 231 IDTAGMRRKAKVDEPI-------------------EKYSVMR--------SLRAVDRSDV 263
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
++ + D G+T D+ I + + K +IL VNK
Sbjct: 264 VLMVFDAVEGVTEQDKRIVGYAHE--AGKAVILVVNK 298
>gi|406670707|ref|ZP_11077952.1| ribosome-associated GTPase EngA [Facklamia hominis CCUG 36813]
gi|405582223|gb|EKB56229.1| ribosome-associated GTPase EngA [Facklamia hominis CCUG 36813]
Length = 444
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 144/313 (46%), Positives = 185/313 (59%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNRL+G +IV D GVTRDR+Y W EF L+DTGG+
Sbjct: 10 LPVVAIVGRPNVGKSTLFNRLIGERISIVADYEGVTRDRIYATGSWLGREFRLIDTGGIE 69
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
V + PL + + QA A EE+ VIIF+
Sbjct: 70 MVDE--------------------PLMNQ----------VRYQAEIATEEADVIIFVTSA 99
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+T DE IA +L ++ +K +ILAVNK ++P + QV EF++LG P PIS+ G
Sbjct: 100 QEGMTDTDEAIAHFLHRS--NKPVILAVNKADNPEQR-AQVYEFYALGHGDPYPISSSHG 156
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TGTG+LLD EL K +D EE + + +GRPNVGKSS++NA++ E+R IVS
Sbjct: 157 TGTGDLLD----ELIKHFPHKDTSEEGDNEIKFSFIGRPNVGKSSLVNAMLKEERVIVSN 212
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
+ GTTR+A+DT F GQ F +IDTAGIRKR + + TE SV RA AI RSD+V
Sbjct: 213 MEGTTREAVDTHFVSKTGQSFTMIDTAGIRKRGKVYEN---TEKYSVMRALSAIDRSDIV 269
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 270 CLVLDAETGIIEQ 282
>gi|419767715|ref|ZP_14293863.1| ribosome-associated GTPase EngA [Streptococcus mitis SK579]
gi|383352868|gb|EID30500.1| ribosome-associated GTPase EngA [Streptococcus mitis SK579]
Length = 436
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 185/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L + EE + +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVENLPN-----EYKEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+VI A I E
Sbjct: 262 LMVINAEEGIRE 273
>gi|223933730|ref|ZP_03625704.1| small GTP-binding protein [Streptococcus suis 89/1591]
gi|302024351|ref|ZP_07249562.1| GTP-binding protein EngA [Streptococcus suis 05HAS68]
gi|330833346|ref|YP_004402171.1| GTP-binding protein EngA [Streptococcus suis ST3]
gi|386584749|ref|YP_006081152.1| GTP-binding protein EngA [Streptococcus suis D9]
gi|223897611|gb|EEF63998.1| small GTP-binding protein [Streptococcus suis 89/1591]
gi|329307569|gb|AEB81985.1| GTP-binding protein EngA [Streptococcus suis ST3]
gi|353736895|gb|AER17904.1| GTP-binding protein EngA [Streptococcus suis D9]
Length = 436
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 185/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L K +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSRILYKT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E EE I +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIIENLPVQEA-----EENPDIIKFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT PEGQ+F +IDTAG+RK + + TE SV RA RAI RSDV+
Sbjct: 205 VAGTTRDAIDTHFTDPEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIERSDVI 261
Query: 462 ALVIEAMACITE 473
+VI A I E
Sbjct: 262 LMVINAEEGIRE 273
>gi|335031580|ref|ZP_08525009.1| ribosome biogenesis GTPase Der [Streptococcus anginosus SK52 = DSM
20563]
gi|333769237|gb|EGL46375.1| ribosome biogenesis GTPase Der [Streptococcus anginosus SK52 = DSM
20563]
Length = 436
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 138/314 (43%), Positives = 189/314 (60%), Gaps = 46/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATAEWLNRKFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-SEIFDFYALGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTE--DLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
GTG++LD + L E E D+++ +++GRPNVGKSS++NA++GEDR I
Sbjct: 150 IGTGDILDAIVENLPNEEAAENPDMIK-------FSLIGRPNVGKSSLINAILGEDRVIA 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SP++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD
Sbjct: 203 SPVAGTTRDAIDTVFTDDEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSD 259
Query: 460 VVALVIEAMACITE 473
VV +V+ A I E
Sbjct: 260 VVLMVLNAEEGIRE 273
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 371 IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPE--GQKFRLIDTA 428
+P IAIVGRPNVGKS++ N + GE +IV + G TRD I + E +KF +IDT
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRI---YATAEWLNRKFSMIDTG 59
Query: 429 GIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQADW 477
GI A E + ++A A+ +DV+ V+ IT+ ++
Sbjct: 60 GIDDVDA-----PFMEQIK-HQAEIAMEEADVIVFVVSGKEGITDADEY 102
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 40/180 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + F + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTVFTDDEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S V++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSE------FWSLGFSPL 334
+ G+ D+ IA + + K II+ VNK ++ K MQ E F L ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIIIVVNKWDTLEKDNKTMQNWEADIRDQFQYLSYAPI 325
>gi|386362151|ref|YP_006071482.1| GTPase Der [Streptococcus pyogenes Alab49]
gi|350276560|gb|AEQ23928.1| GTPase Der [Streptococcus pyogenes Alab49]
Length = 436
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 186/313 (59%), Gaps = 42/313 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E EE + I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDVLDAIVENLPVEEA-----EENDDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|417936799|ref|ZP_12580105.1| ribosome-associated GTPase EngA [Streptococcus infantis X]
gi|421276376|ref|ZP_15727199.1| ribosome-associated GTPase EngA [Streptococcus mitis SPAR10]
gi|343399241|gb|EGV11763.1| ribosome-associated GTPase EngA [Streptococcus infantis X]
gi|395878329|gb|EJG89396.1| ribosome-associated GTPase EngA [Streptococcus mitis SPAR10]
Length = 436
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE VE+EN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPHEVEDENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +V+ A I E
Sbjct: 261 VLMVLNAEEGIRE 273
>gi|332637852|ref|ZP_08416715.1| GTP-binding protein Der [Weissella cibaria KACC 11862]
Length = 436
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 186/313 (59%), Gaps = 42/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
P VA+VGRPNVGKS +FNR+ G +IV D PGVTRDR+Y R+ W EF L+DTGG
Sbjct: 3 FPVVAVVGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYTRAEWLTREFRLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I M P T+ I +QA AI+E+ VI+F+V
Sbjct: 61 ------------------IDMADEPFMTQ----------IVQQAEIAIDEADVIVFMVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLT ADE +A L ++ K ++LAVNK ++ ++ EF++LGF P PIS G
Sbjct: 93 QEGLTEADERVAKILYRS--KKPVVLAVNKVDNIEMR-SEIYEFYALGFGDPFPISGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD V S + + E ++ + +GRPNVGKSS++NA++GE+R IVS
Sbjct: 150 TGLGDLLDQVVSHFPETDN-----EADDDSIRFSFIGRPNVGKSSLVNAILGEERVIVSD 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT FT +G +F ++DTAGIRKR + S TE SV RA RAI S+VV
Sbjct: 205 ISGTTRDAIDTRFTSADGDEFVMVDTAGIRKRGKVYES---TEKYSVMRAMRAIDDSNVV 261
Query: 462 ALVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 262 LMVLNAEEGIREQ 274
>gi|94993678|ref|YP_601776.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS10750]
gi|166225863|sp|Q1JIH4.1|DER_STRPD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166225864|sp|Q1J8C9.1|DER_STRPF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|94543301|gb|ABF33349.1| GTP-binding protein [Streptococcus pyogenes MGAS10270]
gi|94547186|gb|ABF37232.1| GTP-binding protein [Streptococcus pyogenes MGAS10750]
Length = 436
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 186/313 (59%), Gaps = 42/313 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E EE + I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDVLDAIVENLPVEEA-----EENDDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|21909785|ref|NP_664053.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS315]
gi|28896522|ref|NP_802872.1| GTP-binding protein EngA [Streptococcus pyogenes SSI-1]
gi|341958620|sp|P0DA90.1|DER_STRP3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|341958621|sp|P0DA91.1|DER_STRPQ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|21903970|gb|AAM78856.1| putative phosphoglycerate dehydrogenase [Streptococcus pyogenes
MGAS315]
gi|28811776|dbj|BAC64705.1| putative phosphoglycerate dehydrogenase [Streptococcus pyogenes
SSI-1]
Length = 436
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 186/313 (59%), Gaps = 42/313 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E EE + I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDVLDAIVENLPVEEA-----EENDDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|395240783|ref|ZP_10417807.1| GTPase Der [Lactobacillus gigeriorum CRBIP 24.85]
gi|394475565|emb|CCI87784.1| GTPase Der [Lactobacillus gigeriorum CRBIP 24.85]
Length = 435
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 145/314 (46%), Positives = 187/314 (59%), Gaps = 42/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVG+PNVGKS LFNR++ AIV D PGVTRDR Y + W H+F ++DTGG+
Sbjct: 1 MLPTVAIVGQPNVGKSTLFNRIINERLAIVEDRPGVTRDRNYAPAEWLGHKFNIIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
ED ++ I QA AI+E+ VIIFL +
Sbjct: 61 ---------TWED---------------------GKIEEEIRAQAEIAIDEADVIIFLTN 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+G+T DE+IA L K K IILAVNK ++P + + + +F+SLG P+P+S
Sbjct: 91 VLSGITDLDEKIAQLLYKT--TKPIILAVNKADNPEQRV-NIYDFYSLGLGDPIPVSGSH 147
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG G+LLD V + D V++E A +++GRPNVGKSSI+N L+GE R IV+
Sbjct: 148 GTGIGDLLDKVVDSFPE---KSDKVDDET--IAFSVIGRPNVGKSSIVNKLLGEQRVIVA 202
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
+ GTTRDAIDT FT +G KFRLIDTAGIR+R + TE SV RA AI RSDV
Sbjct: 203 NMEGTTRDAIDTPFTDEDGTKFRLIDTAGIRRRGKVYEK---TEKYSVMRALGAIERSDV 259
Query: 461 VALVIEAMACITEQ 474
V LV++A I EQ
Sbjct: 260 VLLVLDASTGIREQ 273
>gi|389857236|ref|YP_006359479.1| GTP-binding protein EngA [Streptococcus suis ST1]
gi|353740954|gb|AER21961.1| GTP-binding protein EngA [Streptococcus suis ST1]
Length = 436
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 185/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L K +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSRILYKT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E EE I +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIIENLPAQEA-----EENPDIIKFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT PEGQ+F +IDTAG+RK + + TE SV RA RAI RSDV+
Sbjct: 205 VAGTTRDAIDTYFTDPEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIERSDVI 261
Query: 462 ALVIEAMACITE 473
+VI A I E
Sbjct: 262 LMVINAEEGIRE 273
>gi|357238269|ref|ZP_09125606.1| ribosome-associated GTPase EngA [Streptococcus ictaluri 707-05]
gi|356752992|gb|EHI70113.1| ribosome-associated GTPase EngA [Streptococcus ictaluri 707-05]
Length = 436
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 186/313 (59%), Gaps = 42/313 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + +K +ILAVNK ++P + +F+SLG P P S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NKPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPASSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E EE + I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDILDTIVENLPVEEA-----EENDNIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT EGQ++ +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTNFTDAEGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|15674498|ref|NP_268672.1| GTP-binding protein EngA [Streptococcus pyogenes SF370]
gi|19745453|ref|NP_606589.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS8232]
gi|50913661|ref|YP_059633.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS10394]
gi|56808746|ref|ZP_00366464.1| COG1160: Predicted GTPases [Streptococcus pyogenes M49 591]
gi|71910101|ref|YP_281651.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS5005]
gi|94987918|ref|YP_596019.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS9429]
gi|94991802|ref|YP_599901.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS2096]
gi|209558845|ref|YP_002285317.1| GTP-binding protein EngA [Streptococcus pyogenes NZ131]
gi|383479473|ref|YP_005388367.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS15252]
gi|383493397|ref|YP_005411073.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS1882]
gi|410679974|ref|YP_006932376.1| ribosome-associated GTPase EngA [Streptococcus pyogenes A20]
gi|417857486|ref|ZP_12502545.1| GTP-binding protein Der [Streptococcus pyogenes HKU QMH11M0907901]
gi|421891975|ref|ZP_16322703.1| GTP-binding protein EngA [Streptococcus pyogenes NS88.2]
gi|54037054|sp|P64065.1|DER_STRP8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|54040977|sp|P64064.1|DER_STRP1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|68052093|sp|Q5XDR3.1|DER_STRP6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166225861|sp|Q1JDF1.1|DER_STRPB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166225862|sp|Q1JNC4.1|DER_STRPC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238058978|sp|B5XJW0.1|DER_STRPZ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|13621599|gb|AAK33393.1| putative phosphoglycerate dehydrogenase [Streptococcus pyogenes M1
GAS]
gi|19747567|gb|AAL97088.1| putative phosphoglycerate dehydrogenase [Streptococcus pyogenes
MGAS8232]
gi|50902735|gb|AAT86450.1| GTP-binding protein [Streptococcus pyogenes MGAS10394]
gi|71852883|gb|AAZ50906.1| GTP-binding protein [Streptococcus pyogenes MGAS5005]
gi|94541426|gb|ABF31475.1| GTP-binding protein [Streptococcus pyogenes MGAS9429]
gi|94545310|gb|ABF35357.1| GTP-binding protein [Streptococcus pyogenes MGAS2096]
gi|209540046|gb|ACI60622.1| GTP-binding protein EngA [Streptococcus pyogenes NZ131]
gi|378927463|gb|AFC65669.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS15252]
gi|378929125|gb|AFC67542.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS1882]
gi|379982273|emb|CCG26425.1| GTP-binding protein EngA [Streptococcus pyogenes NS88.2]
gi|387934441|gb|EIK42554.1| GTP-binding protein Der [Streptococcus pyogenes HKU QMH11M0907901]
gi|395453346|dbj|BAM29685.1| GTP-binding protein [Streptococcus pyogenes M1 476]
gi|409692563|gb|AFV37423.1| ribosome-associated GTPase EngA [Streptococcus pyogenes A20]
Length = 436
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 186/313 (59%), Gaps = 42/313 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E EE + I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDVLDAIVENLPVEEA-----EENDDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|424788271|ref|ZP_18215030.1| ribosome-associated GTPase EngA [Streptococcus intermedius BA1]
gi|422113035|gb|EKU16792.1| ribosome-associated GTPase EngA [Streptococcus intermedius BA1]
Length = 436
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS FNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTFFNRIAGERISIVEDVEGVTRDRIYATAEWLNRKFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIRHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S+I G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-SEIFDFYALGLGEPYPVSSIHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L K E++VE + I +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIVENLPK----EEVVENPDMI-KFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|357010270|ref|ZP_09075269.1| GTP-binding protein Der [Paenibacillus elgii B69]
Length = 440
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 144/314 (45%), Positives = 195/314 (62%), Gaps = 45/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR++G AIV D+PGVTRDR+YGR W + EF ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTVFNRIIGDKLAIVEDKPGVTRDRLYGRGEWLDTEFSVIDTGGIEI 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ Q IM+ + + QA AIEE+ VI+F+VD +
Sbjct: 64 DGEDQ--IMKSVRV---------------------------QAELAIEEADVIVFMVDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGT 342
AG+T AD E+A+ L + K +I+AVNK ++ ++ I + EF+SLGF + IS GT
Sbjct: 95 AGITPADSEVAEMLFR--AKKPVIIAVNKVDNLKR-IDDIYEFYSLGFGDVVGISGSHGT 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEE--NRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G+LLD V D EEE + +A++GRPNVGKSS++NA++GE+R IVS
Sbjct: 152 GIGDLLDEVIKHFP------DTSEEEYGEDVIKVALIGRPNVGKSSLVNAILGEERVIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
++GTTRDAIDT F +GQK+ +IDTAG+RKR + TTE SV RA +AI R+DV
Sbjct: 206 NVAGTTRDAIDTPFE-KDGQKYVIIDTAGMRKRGKVY---ETTEKYSVMRAMKAIERADV 261
Query: 461 VALVIEAMACITEQ 474
V +VI+ I EQ
Sbjct: 262 VLVVIDGEEGIIEQ 275
>gi|312868488|ref|ZP_07728688.1| ribosome biogenesis GTPase Der [Streptococcus parasanguinis F0405]
gi|322390089|ref|ZP_08063624.1| ribosome-associated GTPase EngA [Streptococcus parasanguinis ATCC
903]
gi|337282538|ref|YP_004622009.1| ribosome-associated GTPase EngA [Streptococcus parasanguinis ATCC
15912]
gi|387880090|ref|YP_006310393.1| GTP-binding protein EngA [Streptococcus parasanguinis FW213]
gi|414156064|ref|ZP_11412373.1| GTPase Der [Streptococcus sp. F0442]
gi|419800310|ref|ZP_14325596.1| ribosome-associated GTPase EngA [Streptococcus parasanguinis F0449]
gi|311096233|gb|EFQ54477.1| ribosome biogenesis GTPase Der [Streptococcus parasanguinis F0405]
gi|321143216|gb|EFX38659.1| ribosome-associated GTPase EngA [Streptococcus parasanguinis ATCC
903]
gi|335370131|gb|AEH56081.1| ribosome-associated GTPase EngA [Streptococcus parasanguinis ATCC
15912]
gi|385695470|gb|EIG26030.1| ribosome-associated GTPase EngA [Streptococcus parasanguinis F0449]
gi|386793540|gb|AFJ26575.1| GTP-binding protein EngA [Streptococcus parasanguinis FW213]
gi|410872273|gb|EKS20217.1| GTPase Der [Streptococcus sp. F0442]
Length = 436
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 189/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATAEWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE + L K + K +ILAVNK ++P + +F++LG PLP+S++ G
Sbjct: 93 KEGITDADEYVTRILYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + +E + EEEN I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------IENLPNETEEENPDIIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|343525366|ref|ZP_08762321.1| ribosome-associated GTPase EngA [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
gi|343395636|gb|EGV08174.1| ribosome-associated GTPase EngA [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
Length = 436
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVADVEGVTRDRIYATAEWLNRKFSMIDTGGIN 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E V E + +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVENLPNEE-----VAENPDMIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 371 IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPE--GQKFRLIDTA 428
+P IAIVGRPNVGKS++ N + GE +IV+ + G TRD I + E +KF +IDT
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVADVEGVTRDRI---YATAEWLNRKFSMIDTG 59
Query: 429 GIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQADW 477
GI A E + ++A A+ +DV+ V+ IT+ ++
Sbjct: 60 GINDVDA-----PFMEQIK-HQAEIAMDEADVIVFVVSGKEGITDADEY 102
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSE------FWSLGFSPLP 335
G+ D+ IA + + K II+ VNK ++ K MQ E F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTLEKDNKTMQNWEADIRDQFQYLSYAPIV 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L +++
Sbjct: 327 FVSALTKQRLHKLPEMI 343
>gi|295706430|ref|YP_003599505.1| GTP-binding protein EngA [Bacillus megaterium DSM 319]
gi|294804089|gb|ADF41155.1| GTP-binding protein EngA [Bacillus megaterium DSM 319]
Length = 436
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 194/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W +F ++DTGG+
Sbjct: 4 PIIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSSGEWLNVDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I++QA AI+E+ VIIFLV+G+
Sbjct: 62 ----------------DIGDE--PFLEQ----------IKQQAEIAIDEADVIIFLVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L K+ K ++LAVNK ++P + + +F++LG+ P PIS G
Sbjct: 94 DGITAADEEVAKILYKS--KKPVVLAVNKVDNPEMREL-IYDFYALGYGEPFPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD K E ED EE + +++GRPNVGKSS++NAL+GEDR IVS +
Sbjct: 151 GLGDLLDEAAKHFPK-EKDEDYGEE---VIKFSLIGRPNVGKSSLVNALLGEDRVIVSDL 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT+FT E Q++ +IDTAG+RKR + S TE SV RA +AI RSDVV
Sbjct: 207 AGTTRDAIDTKFT-KEDQEYVVIDTAGMRKRGKVYES---TEKYSVLRALKAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIIEQ 274
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N L+G +R IV D G TRD + + + E++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSLVNALLGEDRVIVSDLAGTTRDAIDTKFTKEDQEYVVIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ +++ +
Sbjct: 234 -RKRGKVYE---------------STEKYSVLR--------ALKAIERSDVVLVVLNAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE-----FWSLGFSPLP- 335
G+ D++IA + ++ K +++ VNK E K + + E F L ++P+
Sbjct: 270 GIIEQDKKIAGYAQE--AGKAVVIVVNKWDTVEKDEKTMKKFEENIREHFQFLTYAPIVF 327
Query: 336 ISAISGTGTGELLDLV 351
+SA + T LL ++
Sbjct: 328 LSAKTKKRTHTLLPMI 343
>gi|306829944|ref|ZP_07463131.1| ribosome-associated GTPase EngA [Streptococcus mitis ATCC 6249]
gi|304427955|gb|EFM31048.1| ribosome-associated GTPase EngA [Streptococcus mitis ATCC 6249]
Length = 436
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 144/315 (45%), Positives = 188/315 (59%), Gaps = 48/315 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTL--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG++LD + VE VEEEN + +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAI------VENLPHEVEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SP++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RS
Sbjct: 202 ASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRS 258
Query: 459 DVVALVIEAMACITE 473
DVV +V+ A I E
Sbjct: 259 DVVLMVLNAEEGIRE 273
>gi|402834205|ref|ZP_10882809.1| ribosome-associated GTPase EngA [Selenomonas sp. CM52]
gi|402278784|gb|EJU27839.1| ribosome-associated GTPase EngA [Selenomonas sp. CM52]
Length = 442
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 195/312 (62%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L +IV D PGVTRDR+Y + W EF ++DTGG
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLGRKRVSIVDDLPGVTRDRIYLDAEWLGKEFTMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I L T +A + M +QA A+EE+ VI+FLVDG+
Sbjct: 61 ----------------------IELDTSDAILRSM----RQQAQIAMEEADVILFLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT ADEE+ LR K ++LAVNK +SP++ V EF++LG P+PISA +
Sbjct: 95 AGLTLADEEVGKMLRTT--KKPVLLAVNKIDSPKQE-ADVYEFYNLGLGDPVPISATNAM 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD + + EG E+ E+E+ +IA++GRPNVGKSS++NAL+GE+R IVS +
Sbjct: 152 NLGDLLDALVALFP--EGAEE--EKESDEISIAVIGRPNVGKSSLVNALLGEERVIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F E KF LIDTAG+R++ I + E SV RA RA+ R+DVV
Sbjct: 208 AGTTRDAIDTHFMA-EDTKFILIDTAGMRRKGKI---DAPIERYSVMRALRAVDRADVVL 263
Query: 463 LVIEAMACITEQ 474
+V++A A ITEQ
Sbjct: 264 VVLDATAGITEQ 275
>gi|422758324|ref|ZP_16812086.1| GTP-binding protein EngA [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322411159|gb|EFY02067.1| GTP-binding protein EngA [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 436
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 187/313 (59%), Gaps = 42/313 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV + GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVENVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKNQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E VEE + I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDILDAIVENLPVEE-----VEENDDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|417918180|ref|ZP_12561732.1| ribosome-associated GTPase EngA [Streptococcus parasanguinis SK236]
gi|342828635|gb|EGU63001.1| ribosome-associated GTPase EngA [Streptococcus parasanguinis SK236]
Length = 436
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 189/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATAEWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE + L K + K +ILAVNK ++P + +F++LG PLP+S++ G
Sbjct: 93 KEGITDADEYVTRILYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + +E + EEEN I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------IENLPNETEEENPDIIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|373464324|ref|ZP_09555863.1| ribosome biogenesis GTPase Der [Lactobacillus kisonensis F0435]
gi|371762526|gb|EHO51055.1| ribosome biogenesis GTPase Der [Lactobacillus kisonensis F0435]
Length = 435
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 191/313 (61%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P VA +GRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F ++DTGG+
Sbjct: 3 MPTVAFIGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYSHGEWLTTKFAMIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
E + A + I+ QA AI+E+ VI+F+V G
Sbjct: 62 -----------------------------EISDAPFSTQIKNQAEIAIDEADVIVFIVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ GLTA DE++A L ++ DK ++LAVNK ++P +G + +F+SLGF P+PIS + G
Sbjct: 93 KEGLTADDEQVAKILYRS--DKPVVLAVNKVDNP-EGREDIYDFYSLGFGDPMPISGVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G G+LLD V + K + E ++ R +I+GRPNVGKSS++NA++GEDR IVS
Sbjct: 150 LGLGDLLDKVVEKFPKTD--EKAPNDDIRF---SIIGRPNVGKSSLVNAILGEDRVIVSD 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDAIDT F +G KF ++DTAGIRKR + + TE SV RA +AI +SDV+
Sbjct: 205 IAGTTRDAIDTRFEA-DGIKFTMVDTAGIRKRGKVYEN---TERYSVMRAMKAIDQSDVI 260
Query: 462 ALVIEAMACITEQ 474
V+ A I EQ
Sbjct: 261 LFVMNAEEGIREQ 273
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +I+GRPNVGKS+L N ++G +R IV D G TRD + R +F +VDT G+
Sbjct: 176 RFSIIGRPNVGKSSLVNAILGEDRVIVSDIAGTTRDAIDTRFEADGIKFTMVDTAGIRKR 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T +V R A AI++S VI+F+++ +
Sbjct: 236 GKVYEN-------------------TERYSVMR--------AMKAIDQSDVILFVMNAEE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG--------IMQVSEFWSLGFSPLP- 335
G+ D+++A + + K II VNK ++ +K + +EF + +SP+
Sbjct: 269 GIREQDKKVAGYAHE--AGKAIITVVNKWDTLKKTNHTQQDFETLIRNEFQYMAYSPIIF 326
Query: 336 ISAISGTGTGELLDLV 351
+SA++ +L L+
Sbjct: 327 VSAVTKQRIEKLPQLI 342
>gi|406659551|ref|ZP_11067689.1| ribosome-associated GTPase EngA [Streptococcus iniae 9117]
gi|405577660|gb|EKB51808.1| ribosome-associated GTPase EngA [Streptococcus iniae 9117]
Length = 436
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 188/313 (60%), Gaps = 42/313 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + +K +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGITDADEYVSRILYRT--NKPVILAVNKVDNPEMR-NDIYDFYSLGLGEPFPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L ++ EE + I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDVLDAIVENLPV-----EVAEENDDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ++ +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTNFTDADGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V LVI A I E
Sbjct: 261 VLLVINAEEGIRE 273
>gi|419781808|ref|ZP_14307622.1| ribosome-associated GTPase EngA [Streptococcus oralis SK610]
gi|383183866|gb|EIC76398.1| ribosome-associated GTPase EngA [Streptococcus oralis SK610]
Length = 436
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/315 (45%), Positives = 188/315 (59%), Gaps = 48/315 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG++LD + L VEEEN + +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAIVDNLPHE------VEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SP++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RS
Sbjct: 202 ASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRS 258
Query: 459 DVVALVIEAMACITE 473
DVV +V+ A I E
Sbjct: 259 DVVLMVLNAEEGIRE 273
>gi|433449334|ref|ZP_20412198.1| GTP-binding protein Der [Weissella ceti NC36]
gi|429538848|gb|ELA06886.1| GTP-binding protein Der [Weissella ceti NC36]
Length = 436
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 191/313 (61%), Gaps = 42/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS +FN + G +IV D PG+TRDR+Y R+ W EF L+DTGG
Sbjct: 3 LPVMAIVGRPNVGKSTIFNSIAGDRISIVEDTPGITRDRIYTRAEWLTQEFRLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I ++ P S I QA AI+E+ VI+F+V
Sbjct: 61 ------------------IDIDDEPFM----------SQITHQAEIAIDEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
+ G+T ADE +A L ++ K ++LAVNK ++ ++ +F++LGF P PIS
Sbjct: 93 KEGMTEADERVAKILYRS--KKPVVLAVNKVDNVEMR-AEIYDFYALGFGEPFPISGTHR 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD V SE + +G D +++I +++GRPNVGKSSI+NAL+GE+R IVS
Sbjct: 150 TGMGDLLDQVVSEFPETDGITD----DDKI-RFSLIGRPNVGKSSIVNALLGEERVIVSD 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDA+DT+FT PEG +F ++DTAGIRKR + TTE SV RA RAI S+VV
Sbjct: 205 VAGTTRDAVDTKFTTPEGDEFVMVDTAGIRKRGKVY---ETTEKYSVMRAMRAIDDSNVV 261
Query: 462 ALVIEAMACITEQ 474
+V+ A I +Q
Sbjct: 262 LMVLNAEEGIRDQ 274
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 41/204 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS++ N L+G R IV D G TRD + + E EF++VDT G+
Sbjct: 176 RFSLIGRPNVGKSSIVNALLGEERVIVSDVAGTTRDAVDTKFTTPEGDEFVMVDTAGI-- 233
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + + E T + +V R A AI++S V++ +++ +
Sbjct: 234 --RKRGKVYE---------------TTEKYSVMR--------AMRAIDDSNVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLP 335
G+ D+ +A + + + I++ VNK ++ K + SEF L ++P+
Sbjct: 269 EGIRDQDKHVAGYAHE--AGRAIVIVVNKWDTLEKDNHTMKEFEQTIRSEFQYLSYAPI- 325
Query: 336 ISAISGTGTGELLDLVCSELKKVE 359
T + LD + +K+V+
Sbjct: 326 --IFVSAKTKQRLDKLPELIKQVD 347
>gi|313890874|ref|ZP_07824498.1| ribosome biogenesis GTPase Der [Streptococcus pseudoporcinus SPIN
20026]
gi|416852038|ref|ZP_11909183.1| ribosome-associated GTPase EngA [Streptococcus pseudoporcinus LQ
940-04]
gi|313120772|gb|EFR43887.1| ribosome biogenesis GTPase Der [Streptococcus pseudoporcinus SPIN
20026]
gi|356739527|gb|EHI64759.1| ribosome-associated GTPase EngA [Streptococcus pseudoporcinus LQ
940-04]
Length = 436
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 186/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAQIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILA+NK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVAKMLYRTH--KPVILAINKVDNPEMR-NDIYDFYSLGLGDPYPLSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E VE+ I +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVENLPVEE-----VEDNENIIRFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTSFTDSDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+VI A I E
Sbjct: 262 LMVINAEEGIRE 273
>gi|415885325|ref|ZP_11547253.1| GTP-binding protein EngA [Bacillus methanolicus MGA3]
gi|387590994|gb|EIJ83313.1| GTP-binding protein EngA [Bacillus methanolicus MGA3]
Length = 436
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 193/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W H+F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERISIVEDIPGVTRDRIYSSAEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I +QA AI E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PFLEQ----------IRQQAEIAINEADVIIFITNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L K+ K ++LAVNK ++P Q+ +F+SLGF P+PIS G
Sbjct: 94 EGVTAADEEVAKILYKS--RKPVVLAVNKVDNPDMR-DQIYDFYSLGFGEPIPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + + ED E ++ + ++GRPNVGKSS++NAL+GE+R IVS I
Sbjct: 151 GLGDLLDEVAKHFPRKQ--ED--EYDDDVIKFCLIGRPNVGKSSLVNALLGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAID+ +T GQK+ +IDTAG+RK+ I TTE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAIDSPYTY-NGQKYVIIDTAGMRKKGKIY---ETTEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V+ I EQ
Sbjct: 263 VVLNGEEGIIEQ 274
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ ++GRPNVGKS+L N L+G R IV D G TRD + + +++++DT G+
Sbjct: 177 KFCLIGRPNVGKSSLVNALLGEERVIVSDIAGTTRDAIDSPYTYNGQKYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + I E T + +V R A AIE S V++ +++G+
Sbjct: 234 -RKKGKIYE---------------TTEKYSVLR--------ALRAIERSDVVLVVLNGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + + +++ VNK ++ K + EF
Sbjct: 270 GIIEQDKRIAGYAHE--AGRAVVIVVNKWDAVEKDEKTMKEF 309
>gi|71902945|ref|YP_279748.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS6180]
gi|123640474|sp|Q48V63.1|DER_STRPM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|71802040|gb|AAX71393.1| GTP-binding protein [Streptococcus pyogenes MGAS6180]
Length = 436
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 186/313 (59%), Gaps = 42/313 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E EE + I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDVLDEIVENLPVEEA-----EENDDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|422859518|ref|ZP_16906162.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK330]
gi|327470401|gb|EGF15857.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK330]
Length = 436
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 190/312 (60%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATASWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E++V+ + I +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVENLP----NEEVVKNPDMI-KFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|441471716|emb|CCQ21471.1| GTPase Der [Listeria monocytogenes]
gi|441474848|emb|CCQ24602.1| GTPase Der [Listeria monocytogenes N53-1]
Length = 392
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 189/316 (59%), Gaps = 50/316 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W EF ++DTGG
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKEFNIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + P + I QA AI+E+ VIIF+ +G+
Sbjct: 61 -----------------IDLSDEPFLEQ----------IRAQAEIAIDEADVIIFITNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K I+LA+NK ++P QV +F+SLGF P PIS G
Sbjct: 94 EGVTDADEQVAKILYRS--NKPIVLAINKVDNPEMR-DQVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIP----AIAIVGRPNVGKSSILNALVGEDRTI 398
G G++LD V + K EEE P +++GRPNVGKSSILNAL+GEDR I
Sbjct: 151 GLGDMLDAVRAHFPK--------EEEEEYPDDTVKFSLIGRPNVGKSSILNALLGEDRVI 202
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VS I+GTTRDAIDT +T +GQ + +IDTAG+RKR + S TE SV RA RAI RS
Sbjct: 203 VSDIAGTTRDAIDTTYTF-DGQDYVMIDTAGMRKRGKVYES---TEKYSVLRAMRAIERS 258
Query: 459 DVVALVIEAMACITEQ 474
DVV +VI A I EQ
Sbjct: 259 DVVLVVINAEEGIREQ 274
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS++ N L+G +R IV D G TRD + + +++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSILNALLGEDRVIVSDIAGTTRDAIDTTYTFDGQDYVMIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ +++ +
Sbjct: 234 -RKRGKVYE---------------STEKYSVLR--------AMRAIERSDVVLVVINAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + II+ VNK ++ K ++ +F L ++P+
Sbjct: 270 GIREQDKRIAGYAHD--AGRAIIIVVNKWDAINKDEKTINVWTEDIREQFQFLSYAPI 325
>gi|422857828|ref|ZP_16904478.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1057]
gi|327462002|gb|EGF08331.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1057]
Length = 436
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATASWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E V E + +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVENLPNEE-----VAENPDMIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|295100402|emb|CBK97947.1| ribosome-associated GTPase EngA [Faecalibacterium prausnitzii L2-6]
Length = 447
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 190/312 (60%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN+L G AIV D PG+TRDR++ W HEF+LVDTGG+
Sbjct: 4 PIVAVVGRPNVGKSTLFNKLCGQRLAIVEDTPGITRDRIFANCEWSGHEFLLVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P EGI RE QA AI+ + II +VD +
Sbjct: 62 ----EPK-----------ATEGILAHMRE------------QAQIAIDTADCIIMVVDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGT 342
GLTAADE++A LR+++ K IILAVNKC++ + M++ EF++LGF +PIS++ G
Sbjct: 95 NGLTAADEDVAHMLRRSH--KPIILAVNKCDNVGETPMELYEFYNLGFDEVMPISSVHGH 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD VC+ L E V EE+RIP +AI+GRPNVGKSS+ N ++GE+R IV+
Sbjct: 153 GTGDLLDAVCAHLDFSE----TVVEEDRIP-VAIIGRPNVGKSSLTNRILGENRMIVANE 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT G KF DTAG+RKR+ I E V RA A+ RS V
Sbjct: 208 AGTTRDAIDTPVDNAYG-KFIFTDTAGLRKRSNITDG---LERYMVVRALAAVERSRVAL 263
Query: 463 LVIEAMACITEQ 474
++++A TEQ
Sbjct: 264 ILVDATVGFTEQ 275
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 58/213 (27%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM-------YGRSFWGE 210
V E +P VAI+GRPNVGKS+L NR++G NR IV +E G TRD + YG+
Sbjct: 172 VEEDRIP-VAIIGRPNVGKSSLTNRILGENRMIVANEAGTTRDAIDTPVDNAYGK----- 225
Query: 211 HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAI 270
F+ DT G+ + + NI T G+E M+ R A AA+
Sbjct: 226 --FIFTDTAGL----RKRSNI--------TDGLE--------------RYMVVR-ALAAV 256
Query: 271 EESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK-----------CESPRKG 319
E S V + LVD G T D ++A + K I+ VNK E R+G
Sbjct: 257 ERSRVALILVDATVGFTEQDSKVAGYAHDQ--GKACIIVVNKWDAVEGKETNTMELQRRG 314
Query: 320 IMQVSEFWSLGFSPLP-ISAISGTGTGELLDLV 351
+ F +G++P+ ISA +G +L+ L+
Sbjct: 315 YAECFSF--MGYAPIIFISAQTGYNVNKLMQLI 345
>gi|358464382|ref|ZP_09174347.1| ribosome biogenesis GTPase Der [Streptococcus sp. oral taxon 058
str. F0407]
gi|357067148|gb|EHI77278.1| ribosome biogenesis GTPase Der [Streptococcus sp. oral taxon 058
str. F0407]
Length = 436
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 143/315 (45%), Positives = 188/315 (59%), Gaps = 48/315 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG++LD + VE VEEEN + +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAI------VENLPHEVEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SP++G TRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RS
Sbjct: 202 ASPVAGATRDAIDTHFTDADGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRS 258
Query: 459 DVVALVIEAMACITE 473
DVV +V+ A I E
Sbjct: 259 DVVLMVLNAEEGIRE 273
>gi|422875795|ref|ZP_16922265.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1056]
gi|332362231|gb|EGJ40031.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1056]
Length = 436
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATASWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E V E + +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVENLPNEE-----VAENPDMIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|422870290|ref|ZP_16916783.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1087]
gi|328946827|gb|EGG40964.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1087]
Length = 436
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATANWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E V E + +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVENLPNEE-----VAENPDMIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|228475961|ref|ZP_04060669.1| ribosome-associated GTPase EngA [Staphylococcus hominis SK119]
gi|314936392|ref|ZP_07843739.1| ribosome-associated GTPase EngA [Staphylococcus hominis subsp.
hominis C80]
gi|418620058|ref|ZP_13182869.1| ribosome-associated GTPase EngA [Staphylococcus hominis VCU122]
gi|228269784|gb|EEK11264.1| ribosome-associated GTPase EngA [Staphylococcus hominis SK119]
gi|313655011|gb|EFS18756.1| ribosome-associated GTPase EngA [Staphylococcus hominis subsp.
hominis C80]
gi|374823621|gb|EHR87616.1| ribosome-associated GTPase EngA [Staphylococcus hominis VCU122]
Length = 436
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 190/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++P + +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQLLYKS--KKPVVLAVNKVDNPEMR-SDIFDFYSLGFGDPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K+ ED ++ I ++I+GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDEVVKHFKE----EDSDPYDDDIIRLSIIGRPNVGKSSLVNAILGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAVDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
LVI+A I EQ
Sbjct: 263 LVIDAEEGIIEQ 274
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAVDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLLVIDAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAMVIVVNKWDAVEKDTNTMKKF 309
>gi|401681184|ref|ZP_10813089.1| ribosome-associated GTPase EngA [Streptococcus sp. AS14]
gi|400187319|gb|EJO21514.1| ribosome-associated GTPase EngA [Streptococcus sp. AS14]
Length = 436
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATANWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E V E + +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVENLPNEE-----VAENPDMIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|422884715|ref|ZP_16931163.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK49]
gi|332359145|gb|EGJ36966.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK49]
Length = 436
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATANWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E V E + +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVENLPNEE-----VAENPDMIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|422861919|ref|ZP_16908551.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK408]
gi|327474514|gb|EGF19919.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK408]
Length = 436
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 190/312 (60%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATASWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E++VE + I +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIVENLP----NEEVVENPDMI-KFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|125718602|ref|YP_001035735.1| GTP-binding protein EngA [Streptococcus sanguinis SK36]
gi|166225867|sp|A3CPT0.1|DER_STRSV RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|125498519|gb|ABN45185.1| GTP-binding protein, putative [Streptococcus sanguinis SK36]
Length = 436
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 190/312 (60%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATANWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E++VE + I +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIVENLP----NEEVVENPDMI-KFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|422864887|ref|ZP_16911512.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1058]
gi|327490071|gb|EGF21859.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1058]
Length = 436
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 190/312 (60%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATASWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E++VE + I +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIVENLP----NEEVVENPDMI-KFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|390559319|ref|ZP_10243665.1| GTP-binding protein engA [Nitrolancetus hollandicus Lb]
gi|390174121|emb|CCF82958.1| GTP-binding protein engA [Nitrolancetus hollandicus Lb]
Length = 497
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/320 (48%), Positives = 185/320 (57%), Gaps = 36/320 (11%)
Query: 156 GNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFML 215
G +P P VAIVGRPNVGKS LFNRL+G RAIV D PG TRDR+YG + W F L
Sbjct: 48 GRIPAVAKPLVAIVGRPNVGKSTLFNRLIGERRAIVEDLPGTTRDRLYGETEWNGVTFGL 107
Query: 216 VDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCV 275
+DTGG + D I +E I AT+E QA A+EE+ +
Sbjct: 108 IDTGG----------LQSDAEIEGASSVE-IVRATQE------------QAGLALEEADL 144
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-L 334
I+FLVD QAG+TA D E+AD LR+ K I + NK ES R EF+ LG
Sbjct: 145 ILFLVDAQAGITAGDLEVADLLRRT--RKPIYVVANKAES-RVNQESSFEFYELGLGDVF 201
Query: 335 PISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGE 394
P+SAI G G G+LLD + EL E EE +PAIAIVGRPNVGKS+ILNA++G
Sbjct: 202 PVSAIHGMGIGDLLDAITEELPIAEAA-----EEPDVPAIAIVGRPNVGKSAILNAILGR 256
Query: 395 DRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRA 454
R IVSPI GTTRDA+DTE G LIDTAGIR+R + E SV RA RA
Sbjct: 257 GRQIVSPIPGTTRDAVDTELVW-SGVPVVLIDTAGIRRRGRVERG---IEKYSVLRASRA 312
Query: 455 IRRSDVVALVIEAMACITEQ 474
I R+DV LV++A T Q
Sbjct: 313 ISRADVAILVLDATEPFTAQ 332
>gi|422820667|ref|ZP_16868860.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK353]
gi|324991285|gb|EGC23218.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK353]
Length = 436
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 190/312 (60%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATANWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E++VE + I +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIVENLP----NEEVVENPDMI-KFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|387929551|ref|ZP_10132228.1| GTP-binding protein Der [Bacillus methanolicus PB1]
gi|387586369|gb|EIJ78693.1| GTP-binding protein Der [Bacillus methanolicus PB1]
Length = 436
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 192/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W H+F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYSSAEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PFLEQ----------IRQQAEIAIDEADVIIFITNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L K+ K ++LAVNK ++P Q+ +F+SLGF P+PIS G
Sbjct: 94 EGVTAADEEVAKILYKS--KKPVVLAVNKVDNPEMR-DQIYDFYSLGFGEPIPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K D EE+ I +++GRPNVGKSS++NAL+GE+R IVS I
Sbjct: 151 GLGDLLDEVA---KHFPSRHDEDYEEDVI-KFSLIGRPNVGKSSLVNALLGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAID+ +T GQK+ +IDTAG+RK+ + TTE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAIDSHYT-YNGQKYVIIDTAGMRKKGKVY---ETTEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V+ I EQ
Sbjct: 263 VVLNGEEGIIEQ 274
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N L+G R IV D G TRD + + +++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSLVNALLGEERVIVSDIAGTTRDAIDSHYTYNGQKYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIE S V++ +++G+
Sbjct: 234 -RKKGKVYE---------------TTEKYSVLR--------ALRAIERSDVVLVVLNGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + + +++ VNK ++ K ++EF
Sbjct: 270 GIIEQDKRIAGYAHE--AGRAVVIVVNKWDAVEKDEKTMNEF 309
>gi|160942963|ref|ZP_02090201.1| hypothetical protein FAEPRAM212_00440 [Faecalibacterium prausnitzii
M21/2]
gi|158445657|gb|EDP22660.1| ribosome biogenesis GTPase Der [Faecalibacterium prausnitzii M21/2]
gi|295103496|emb|CBL01040.1| ribosome-associated GTPase EngA [Faecalibacterium prausnitzii
SL3/3]
Length = 447
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 189/312 (60%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN+L G AIV D PG+TRDR++ W HEF+LVDTGG+
Sbjct: 4 PIVAVVGRPNVGKSTLFNKLCGQRLAIVEDTPGITRDRIFANCEWNGHEFLLVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P EGI RE QA AI+ + II + D +
Sbjct: 62 ----EPK-----------ATEGILAHMRE------------QAQIAIDTADCIIMVTDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGT 342
GLTAADE++A LR+++ K IILAVNKC+ + M++ EF++LGF +PIS++ G
Sbjct: 95 NGLTAADEDVAHMLRRSH--KPIILAVNKCDKVGEAPMELYEFYNLGFDEVMPISSVHGH 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD VC+ L E V EE+RIP +AI+GRPNVGKSS+ N ++GE+R IV+
Sbjct: 153 GTGDLLDAVCAHLDFSE----TVVEEDRIP-VAIIGRPNVGKSSLTNRILGENRMIVANE 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT G KF DTAG+RKR+ I+ E V RA A+ RS V
Sbjct: 208 AGTTRDAIDTPVDNAYG-KFIFTDTAGLRKRSNISDG---LERYMVVRALAAVERSRVAL 263
Query: 463 LVIEAMACITEQ 474
++++A TEQ
Sbjct: 264 ILVDATVGFTEQ 275
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 58/213 (27%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM-------YGRSFWGE 210
V E +P VAI+GRPNVGKS+L NR++G NR IV +E G TRD + YG+
Sbjct: 172 VEEDRIP-VAIIGRPNVGKSSLTNRILGENRMIVANEAGTTRDAIDTPVDNAYGK----- 225
Query: 211 HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAI 270
F+ DT G+ + + NI + L + +A AA+
Sbjct: 226 --FIFTDTAGL----RKRSNISDGLERYMVV-----------------------RALAAV 256
Query: 271 EESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK-----------CESPRKG 319
E S V + LVD G T D ++A + + K I+ VNK E R+G
Sbjct: 257 ERSRVALILVDATVGFTEQDSKVAGYAHEQ--GKACIIVVNKWDAVEGKETNTMELQRRG 314
Query: 320 IMQVSEFWSLGFSPLP-ISAISGTGTGELLDLV 351
+ F +G++P+ ISA +G +L+ L+
Sbjct: 315 YAECFSF--MGYAPIIFISAQTGYNVNKLMQLI 345
>gi|365853597|ref|ZP_09393864.1| ribosome biogenesis GTPase Der [Lactobacillus parafarraginis F0439]
gi|363712222|gb|EHL95921.1| ribosome biogenesis GTPase Der [Lactobacillus parafarraginis F0439]
Length = 443
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 188/313 (60%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P VA +GRPNVGKS +FNR+ G +IV D PGVTRDR+Y W HEF ++DTGG
Sbjct: 11 IPTVAFIGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYTHGEWLTHEFAMIDTGG-- 68
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P +T+ I+ QA AIEE+ VI+F+V
Sbjct: 69 ------------------IQINDAPFSTQ----------IKNQAEIAIEEADVIVFVVSA 100
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ GLT DE++A L ++ DK +++AVNK ++P + + +F++LGF P+PIS + G
Sbjct: 101 KEGLTNDDEQVAKILYRS--DKPVVVAVNKADNP-EAREDIYDFYALGFGDPMPISGVHG 157
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + G E+ N +I+GRPNVGKSS++NAL+GEDR IVS
Sbjct: 158 TGLGDLLDKIVENFPPESG-----EKPNDDIRFSIIGRPNVGKSSLVNALLGEDRVIVSD 212
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDAIDT F +G KF ++DTAGIRKR + + TE SV RA +AI +SDV+
Sbjct: 213 IAGTTRDAIDTRFEA-DGIKFTMVDTAGIRKRGKVYEN---TERYSVMRAMKAIDQSDVI 268
Query: 462 ALVIEAMACITEQ 474
V+ A I EQ
Sbjct: 269 LFVMNAEEGIREQ 281
>gi|16803976|ref|NP_465461.1| GTP-binding protein EngA [Listeria monocytogenes EGD-e]
gi|46908170|ref|YP_014559.1| GTP-binding protein EngA [Listeria monocytogenes serotype 4b str.
F2365]
gi|217963911|ref|YP_002349589.1| GTP-binding protein EngA [Listeria monocytogenes HCC23]
gi|226224541|ref|YP_002758648.1| hypothetical protein Lm4b_01954 [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|254825568|ref|ZP_05230569.1| GTPase [Listeria monocytogenes FSL J1-194]
gi|254827178|ref|ZP_05231865.1| GTPase [Listeria monocytogenes FSL N3-165]
gi|254912495|ref|ZP_05262507.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254931892|ref|ZP_05265251.1| GTPase [Listeria monocytogenes HPB2262]
gi|254936822|ref|ZP_05268519.1| GTPase [Listeria monocytogenes F6900]
gi|254993214|ref|ZP_05275404.1| GTP-binding protein EngA [Listeria monocytogenes FSL J2-064]
gi|255028956|ref|ZP_05300907.1| GTP-binding protein EngA [Listeria monocytogenes LO28]
gi|284802382|ref|YP_003414247.1| GTP-binding protein EngA [Listeria monocytogenes 08-5578]
gi|284995524|ref|YP_003417292.1| GTP-binding protein EngA [Listeria monocytogenes 08-5923]
gi|290892097|ref|ZP_06555093.1| GTPase [Listeria monocytogenes FSL J2-071]
gi|300763753|ref|ZP_07073750.1| GTPase [Listeria monocytogenes FSL N1-017]
gi|386008709|ref|YP_005926987.1| GTPase family protein [Listeria monocytogenes L99]
gi|386027317|ref|YP_005948093.1| GTP-binding protein EngA [Listeria monocytogenes M7]
gi|386044245|ref|YP_005963050.1| ribosome-associated GTPase EngA [Listeria monocytogenes 10403S]
gi|386047589|ref|YP_005965921.1| ribosome-associated GTPase EngA [Listeria monocytogenes J0161]
gi|386050913|ref|YP_005968904.1| GTPase [Listeria monocytogenes FSL R2-561]
gi|386054192|ref|YP_005971750.1| ribosome-associated GTPase EngA [Listeria monocytogenes Finland
1998]
gi|386732678|ref|YP_006206174.1| GTP-binding protein Der [Listeria monocytogenes 07PF0776]
gi|404281549|ref|YP_006682447.1| GTPase family protein [Listeria monocytogenes SLCC2755]
gi|404284434|ref|YP_006685331.1| GTPase family protein [Listeria monocytogenes SLCC2372]
gi|404287365|ref|YP_006693951.1| GTPase family protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404408382|ref|YP_006691097.1| GTPase family protein [Listeria monocytogenes SLCC2376]
gi|404411238|ref|YP_006696826.1| GTPase family protein [Listeria monocytogenes SLCC5850]
gi|404414016|ref|YP_006699603.1| GTPase family protein [Listeria monocytogenes SLCC7179]
gi|405750290|ref|YP_006673756.1| GTPase family protein [Listeria monocytogenes ATCC 19117]
gi|405753164|ref|YP_006676629.1| GTPase family protein [Listeria monocytogenes SLCC2378]
gi|405756097|ref|YP_006679561.1| GTPase family protein [Listeria monocytogenes SLCC2540]
gi|405758988|ref|YP_006688264.1| GTPase family protein [Listeria monocytogenes SLCC2479]
gi|406704722|ref|YP_006755076.1| GTPase family protein [Listeria monocytogenes L312]
gi|417315581|ref|ZP_12102257.1| GTP-binding protein Der [Listeria monocytogenes J1816]
gi|417318019|ref|ZP_12104617.1| GTP-binding protein Der [Listeria monocytogenes J1-220]
gi|422410193|ref|ZP_16487154.1| ribosome-associated GTPase EngA [Listeria monocytogenes FSL F2-208]
gi|422810020|ref|ZP_16858431.1| GTP-binding protein EngA [Listeria monocytogenes FSL J1-208]
gi|424823697|ref|ZP_18248710.1| GTPase Der [Listeria monocytogenes str. Scott A]
gi|26006722|sp|Q8Y5W8.1|DER_LISMO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|67460310|sp|Q71Y78.1|DER_LISMF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783158|sp|B8DBY9.1|DER_LISMH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|259645882|sp|C1KWN7.1|DER_LISMC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|16411390|emb|CAD00015.1| lmo1937 [Listeria monocytogenes EGD-e]
gi|46881440|gb|AAT04736.1| GTPase family protein [Listeria monocytogenes serotype 4b str.
F2365]
gi|217333181|gb|ACK38975.1| GTP-binding protein EngA [Listeria monocytogenes HCC23]
gi|225877003|emb|CAS05712.1| Hypothetical protein of unknown function [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258599561|gb|EEW12886.1| GTPase [Listeria monocytogenes FSL N3-165]
gi|258609417|gb|EEW22025.1| GTPase [Listeria monocytogenes F6900]
gi|284057944|gb|ADB68885.1| GTP-binding protein EngA [Listeria monocytogenes 08-5578]
gi|284060991|gb|ADB71930.1| GTP-binding protein EngA [Listeria monocytogenes 08-5923]
gi|290558220|gb|EFD91738.1| GTPase [Listeria monocytogenes FSL J2-071]
gi|293583444|gb|EFF95476.1| GTPase [Listeria monocytogenes HPB2262]
gi|293590479|gb|EFF98813.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|293594811|gb|EFG02572.1| GTPase [Listeria monocytogenes FSL J1-194]
gi|300515489|gb|EFK42539.1| GTPase [Listeria monocytogenes FSL N1-017]
gi|307571519|emb|CAR84698.1| GTPase family protein [Listeria monocytogenes L99]
gi|313607930|gb|EFR84070.1| ribosome-associated GTPase EngA [Listeria monocytogenes FSL F2-208]
gi|328466285|gb|EGF37442.1| GTP-binding protein Der [Listeria monocytogenes J1816]
gi|328472780|gb|EGF43629.1| GTP-binding protein Der [Listeria monocytogenes J1-220]
gi|332312377|gb|EGJ25472.1| GTPase Der [Listeria monocytogenes str. Scott A]
gi|336023898|gb|AEH93035.1| GTP-binding protein EngA [Listeria monocytogenes M7]
gi|345534580|gb|AEO04021.1| ribosome-associated GTPase EngA [Listeria monocytogenes J0161]
gi|345537479|gb|AEO06919.1| ribosome-associated GTPase EngA [Listeria monocytogenes 10403S]
gi|346424759|gb|AEO26284.1| GTPase [Listeria monocytogenes FSL R2-561]
gi|346646843|gb|AEO39468.1| ribosome-associated GTPase EngA [Listeria monocytogenes Finland
1998]
gi|378751684|gb|EHY62272.1| GTP-binding protein EngA [Listeria monocytogenes FSL J1-208]
gi|384391436|gb|AFH80506.1| GTP-binding protein Der [Listeria monocytogenes 07PF0776]
gi|404219490|emb|CBY70854.1| GTPase family protein [Listeria monocytogenes ATCC 19117]
gi|404222364|emb|CBY73727.1| GTPase family protein [Listeria monocytogenes SLCC2378]
gi|404225297|emb|CBY76659.1| GTPase family protein [Listeria monocytogenes SLCC2540]
gi|404228184|emb|CBY49589.1| GTPase family protein [Listeria monocytogenes SLCC2755]
gi|404231064|emb|CBY52468.1| GTPase family protein [Listeria monocytogenes SLCC5850]
gi|404233936|emb|CBY55339.1| GTPase family protein [Listeria monocytogenes SLCC2372]
gi|404236870|emb|CBY58272.1| GTPase family protein [Listeria monocytogenes SLCC2479]
gi|404239715|emb|CBY61116.1| GTPase family protein [Listeria monocytogenes SLCC7179]
gi|404242531|emb|CBY63931.1| GTPase family protein [Listeria monocytogenes SLCC2376]
gi|404246294|emb|CBY04519.1| GTPase family protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406361752|emb|CBY68025.1| GTPase family protein [Listeria monocytogenes L312]
Length = 436
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/316 (46%), Positives = 190/316 (60%), Gaps = 50/316 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
DL+ + I QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------DLSDEPFL------------------EQIRAQAEIAIDEADVIIFITNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K I+LA+NK ++P Q+ +F+SLGF P PIS G
Sbjct: 94 EGVTDADEQVAKILYRS--NKPIVLAINKVDNPEMR-DQIYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIP----AIAIVGRPNVGKSSILNALVGEDRTI 398
G G++LD V + K EEE P +++GRPNVGKSSILNAL+GEDR I
Sbjct: 151 GLGDMLDAVRAHFPK--------EEEEEYPDDTVKFSLIGRPNVGKSSILNALLGEDRVI 202
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VS I+GTTRDAIDT +T +GQ + +IDTAG+RKR + S TE SV RA RAI RS
Sbjct: 203 VSDIAGTTRDAIDTTYTF-DGQDYVMIDTAGMRKRGKVYES---TEKYSVLRAMRAIERS 258
Query: 459 DVVALVIEAMACITEQ 474
DVV +VI A I EQ
Sbjct: 259 DVVLVVINAEEGIREQ 274
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS++ N L+G +R IV D G TRD + + +++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSILNALLGEDRVIVSDIAGTTRDAIDTTYTFDGQDYVMIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ +++ +
Sbjct: 234 -RKRGKVYE---------------STEKYSVLR--------AMRAIERSDVVLVVINAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + II+ VNK ++ K ++ +F L ++P+
Sbjct: 270 GIREQDKRIAGYAHD--AGRAIIIVVNKWDAINKDEKTINVWTEDIREQFQFLSYAPI 325
>gi|294501083|ref|YP_003564783.1| GTP-binding protein EngA [Bacillus megaterium QM B1551]
gi|294351020|gb|ADE71349.1| GTP-binding protein EngA [Bacillus megaterium QM B1551]
Length = 436
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 194/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W +F ++DTGG+
Sbjct: 4 PIIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSSGEWLNVDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I++QA AI+E+ VIIFLV+G+
Sbjct: 62 ----------------DIGDE--PFLEQ----------IKQQAEIAIDEADVIIFLVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L K+ K ++LAVNK ++P + + +F++LG+ P PIS G
Sbjct: 94 DGITAADEEVAKILYKS--KKPVVLAVNKVDNPEMREL-IYDFYALGYGEPFPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD K E ED E+ + +++GRPNVGKSS++NAL+GEDR IVS +
Sbjct: 151 GLGDLLDEAAKHFPK-EKDEDYGED---VIKFSLIGRPNVGKSSLVNALLGEDRVIVSDL 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT+FT E Q++ +IDTAG+RKR + S TE SV RA +AI RSDVV
Sbjct: 207 AGTTRDAIDTKFT-KEDQEYVVIDTAGMRKRGKVYES---TEKYSVLRALKAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIIEQ 274
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N L+G +R IV D G TRD + + + E++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSLVNALLGEDRVIVSDLAGTTRDAIDTKFTKEDQEYVVIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ +++ +
Sbjct: 234 -RKRGKVYE---------------STEKYSVLR--------ALKAIERSDVVLVVLNAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE-----FWSLGFSPLP- 335
G+ D++IA + ++ K +++ VNK E K + + E F L ++P+
Sbjct: 270 GIIEQDKKIAGYAQE--AGKAVVIVVNKWDTVEKDEKTMKKFEENIREHFQFLTYAPIVF 327
Query: 336 ISAISGTGTGELLDLV 351
+SA + T LL ++
Sbjct: 328 LSAKTKKRTHTLLPMI 343
>gi|422847300|ref|ZP_16893983.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK72]
gi|325687138|gb|EGD29161.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK72]
Length = 436
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 188/312 (60%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATANWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG PLP+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPLPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E V E + +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIVENLPNEE-----VAENPDMIKFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|116873379|ref|YP_850160.1| GTP-binding protein EngA [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123458584|sp|A0AK49.1|DER_LISW6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|116742257|emb|CAK21381.1| GTPase family protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 436
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/316 (46%), Positives = 190/316 (60%), Gaps = 50/316 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
DL+ + I QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------DLSDEPFL------------------EQIRAQAEIAIDEADVIIFITNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K I+LA+NK ++P Q+ +F+SLGF P PIS G
Sbjct: 94 EGVTDADEQVAKILYRS--NKPIVLAINKVDNPEMR-DQIYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIP----AIAIVGRPNVGKSSILNALVGEDRTI 398
G G++LD V + K EEE P +++GRPNVGKSSILNAL+GEDR I
Sbjct: 151 GLGDMLDAVRAHFPK--------EEEEEYPDDTVKFSLIGRPNVGKSSILNALLGEDRVI 202
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VS I+GTTRDAIDT +T +GQ + +IDTAG+RKR + S TE SV RA RAI RS
Sbjct: 203 VSDIAGTTRDAIDTTYTF-DGQDYVMIDTAGMRKRGKVYES---TEKYSVLRAMRAIERS 258
Query: 459 DVVALVIEAMACITEQ 474
DVV +VI A I EQ
Sbjct: 259 DVVLVVINAEEGIREQ 274
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS++ N L+G +R IV D G TRD + + +++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSILNALLGEDRVIVSDIAGTTRDAIDTTYTFDGQDYVMIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ +++ +
Sbjct: 234 -RKRGKVYE---------------STEKYSVLR--------AMRAIERSDVVLVVINAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + II+ VNK ++ K ++ +F L ++P+
Sbjct: 270 GIREQDKRIAGYAHD--AGRAIIIVVNKWDAINKDEKTINVWTEDIREQFQFLSYAPI 325
>gi|322388795|ref|ZP_08062392.1| ribosome-associated GTPase EngA [Streptococcus infantis ATCC
700779]
gi|419844194|ref|ZP_14367493.1| ribosome-associated GTPase EngA [Streptococcus infantis ATCC
700779]
gi|321140414|gb|EFX35922.1| ribosome-associated GTPase EngA [Streptococcus infantis ATCC
700779]
gi|385702080|gb|EIG39231.1| ribosome-associated GTPase EngA [Streptococcus infantis ATCC
700779]
Length = 436
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/313 (44%), Positives = 187/313 (59%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ Q A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQTEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE VE+EN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPHEVEDENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +V+ A I E
Sbjct: 261 VLMVLNAEEGIRE 273
>gi|395242107|ref|ZP_10419106.1| GTPase Der [Lactobacillus pasteurii CRBIP 24.76]
gi|394480468|emb|CCI85346.1| GTPase Der [Lactobacillus pasteurii CRBIP 24.76]
Length = 436
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 185/314 (58%), Gaps = 42/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR++ AIV D PGVTRDR Y + W H+F ++DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIIKERLAIVEDRPGVTRDRNYAPAEWLGHKFHIIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
ED ++ I QA AIEE+ VI+FL +
Sbjct: 62 ---------TWED---------------------GKIEEEIRAQAEIAIEEADVIVFLTN 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+T DE+IA L K DK ++LAVNK ++P + + +F+SLG P+P+S+
Sbjct: 92 VVTGVTDLDEKIAQLLYK--ADKPVLLAVNKADNPEQR-SNIYDFYSLGMGEPIPVSSSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG G+LLD + T+D + + +++GRPNVGKSSI+N L+GE+R IV+
Sbjct: 149 GTGIGDLLDTIVDNFPADSDTKD-----DDTISFSVIGRPNVGKSSIVNKLLGEERVIVA 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
+ GTTRDAIDT F +G K+RLIDTAGIR+R + TE SV RA AI RSDV
Sbjct: 204 NMEGTTRDAIDTPFVAADGTKYRLIDTAGIRRRGKVYEK---TEKYSVMRALSAIERSDV 260
Query: 461 VALVIEAMACITEQ 474
V LV++A I EQ
Sbjct: 261 VLLVLDASTGIREQ 274
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 41/206 (19%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLNVS 225
+++GRPNVGKS++ N+L+G R IV + G TRD + + ++ L+DT G+
Sbjct: 178 SVIGRPNVGKSSIVNKLLGEERVIVANMEGTTRDAIDTPFVAADGTKYRLIDTAGI---- 233
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + + E T + +V R A +AIE S V++ ++D G
Sbjct: 234 RRRGKVYE---------------KTEKYSVMR--------ALSAIERSDVVLLVLDASTG 270
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLPIS 337
+ D+ +A + + II+ VNK + P K SEF L ++P+
Sbjct: 271 IREQDKHVAGYAHD--AGRGIIIVVNKWDLPEKNSNSAKDFEKVIRSEFQYLDYAPI--- 325
Query: 338 AISGTGTGELLDLVCSELKKVEGTED 363
TG+ L+ + +KKV ++
Sbjct: 326 IFVSAETGQRLNQIPELVKKVYANQN 351
>gi|392955744|ref|ZP_10321274.1| GTP-binding protein Der [Bacillus macauensis ZFHKF-1]
gi|391877986|gb|EIT86576.1| GTP-binding protein Der [Bacillus macauensis ZFHKF-1]
Length = 437
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 195/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PVLAIVGRPNVGKSTIFNRIVGDRVSIVEDMPGVTRDRIYSSAEWLNREFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E PL ++ +QA AI+E+ VI+FL DG+
Sbjct: 62 ----------------EIGDE--PLL----------QLMRQQAEIAIDEADVIVFLADGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L +++ K ++L VNK ++P + + V +F+SLG P PIS G
Sbjct: 94 EGVTAADEEVAKMLYRSH--KPVVLGVNKIDNPERKEL-VYDFYSLGMGEPYPISGAHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + ED +E+++ +++GRPNVGKSS++NA++ ++R IVS I
Sbjct: 151 GLGDLLDAVMAHFPV--QPEDEIEDDS--IHFSLIGRPNVGKSSLVNAILNKERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAID+ FT EGQK+ +IDTAG+RKR + TTE SV RA +AI RSDVV
Sbjct: 207 AGTTRDAIDSTFT-REGQKYTIIDTAGMRKRGKVY---ETTEKYSVLRALKAIERSDVVC 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 MVLNAEEGIIEQ 274
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 29/160 (18%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS+L N ++ R IV D G TRD + ++ ++DT G+ +
Sbjct: 179 SLIGRPNVGKSSLVNAILNKERVIVSDIAGTTRDAIDSTFTREGQKYTIIDTAGM----R 234
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E T + +V R A AIE S V+ +++ + G+
Sbjct: 235 KRGKVYE---------------TTEKYSVLR--------ALKAIERSDVVCMVLNAEEGI 271
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
D+++A + + K +++ VNK ++ K + EF
Sbjct: 272 IEQDKKVAGFAHE--AGKAVVIIVNKWDAIEKNDKTMREF 309
>gi|335357281|ref|ZP_08549151.1| GTP-binding protein Der [Lactobacillus animalis KCTC 3501]
Length = 436
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 186/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y +S W F L+DTGG
Sbjct: 4 PVVAIVGRPNVGKSTVFNRIAGERISIVEDTPGVTRDRIYAKSEWLGQPFNLIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I M P + I QA AI+E+ VI+F+ +
Sbjct: 61 -----------------IDMGDEPFL----------AQITEQAQIAIDEADVIVFVTSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L + DK +ILAVNK ++P ++ +F+SLGF P+P+S G
Sbjct: 94 EGVTDADEKVAKILYRT--DKPVILAVNKVDNPELR-SEIYDFYSLGFGDPMPLSGTHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD VC K D +E++ + +GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GTGDLLDKVCQAFPK-----DGAKEQDDSIKFSFIGRPNVGKSSLVNAILGENRVIVSNV 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT+F +G +F +IDTAGIRK+ + + TE SV RA RAI RSDVV
Sbjct: 206 EGTTRDAIDTKFVAEDGTEFTMIDTAGIRKKGKVYEN---TEKYSVLRAMRAIDRSDVVC 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIREQ 274
>gi|314933657|ref|ZP_07841022.1| ribosome-associated GTPase EngA [Staphylococcus caprae C87]
gi|313653807|gb|EFS17564.1| ribosome-associated GTPase EngA [Staphylococcus caprae C87]
Length = 436
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 190/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVG+PNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++P + +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQMLYKS--KKPVVLAVNKVDNPEMR-NDIYDFYSLGFGDPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V E TED +E+ ++I+GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVVENFG--EETEDPYDEDT--IRLSIIGRPNVGKSSLVNAILGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DTE++ EGQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAVDTEYS-YEGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAVDTEYSYEGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K I++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTVEKDSKTMKKF 309
>gi|424714812|ref|YP_007015527.1| GTPase Der [Listeria monocytogenes serotype 4b str. LL195]
gi|424013996|emb|CCO64536.1| GTPase Der [Listeria monocytogenes serotype 4b str. LL195]
Length = 446
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 147/316 (46%), Positives = 190/316 (60%), Gaps = 50/316 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 14 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKEFNIIDTGGI-- 71
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
DL+ + I QA AI+E+ VIIF+ +G+
Sbjct: 72 ----------DLSDEPFL------------------EQIRAQAEIAIDEADVIIFITNGR 103
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K I+LA+NK ++P Q+ +F+SLGF P PIS G
Sbjct: 104 EGVTDADEQVAKILYRS--NKPIVLAINKVDNPEMR-DQIYDFYSLGFGEPYPISGSHGL 160
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIP----AIAIVGRPNVGKSSILNALVGEDRTI 398
G G++LD V + K EEE P +++GRPNVGKSSILNAL+GEDR I
Sbjct: 161 GLGDMLDAVRAHFPK--------EEEEEYPDDTVKFSLIGRPNVGKSSILNALLGEDRVI 212
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VS I+GTTRDAIDT +T +GQ + +IDTAG+RKR + S TE SV RA RAI RS
Sbjct: 213 VSDIAGTTRDAIDTTYTF-DGQDYVMIDTAGMRKRGKVYES---TEKYSVLRAMRAIERS 268
Query: 459 DVVALVIEAMACITEQ 474
DVV +VI A I EQ
Sbjct: 269 DVVLVVINAEEGIREQ 284
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS++ N L+G +R IV D G TRD + + +++++DT G+
Sbjct: 187 KFSLIGRPNVGKSSILNALLGEDRVIVSDIAGTTRDAIDTTYTFDGQDYVMIDTAGM--- 243
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ +++ +
Sbjct: 244 -RKRGKVYE---------------STEKYSVLR--------AMRAIERSDVVLVVINAEE 279
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + II+ VNK ++ K ++ +F L ++P+
Sbjct: 280 GIREQDKRIAGYAHD--AGRAIIIVVNKWDAINKDEKTINVWTEDIREQFQFLSYAPI 335
>gi|410453977|ref|ZP_11307920.1| GTP-binding protein Der [Bacillus bataviensis LMG 21833]
gi|409932657|gb|EKN69615.1| GTP-binding protein Der [Bacillus bataviensis LMG 21833]
Length = 436
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/315 (45%), Positives = 192/315 (60%), Gaps = 48/315 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I +QA AI+E+ VIIFL +G+
Sbjct: 62 ----------------DIGDE--PFLEQ----------IRQQAEVAIDEADVIIFLTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L K+ K I+L VNK ++P Q+ +F++LGF P+PIS G
Sbjct: 94 EGVTAADEEVAKILYKS--KKPIVLGVNKIDNPEMR-EQIYDFYALGFGEPIPISGSHGL 150
Query: 343 GTGELLDLVCSEL---KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G G+LLD K+++ +D+V+ +++GRPNVGKSS++NA++GEDR IV
Sbjct: 151 GLGDLLDEAAKHFPKNKQLDYDDDVVK-------FSLIGRPNVGKSSLVNAILGEDRVIV 203
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S I+GTTRDA+D+ +T G K+ +IDTAGIRK+ + TTE SV RA RAI RSD
Sbjct: 204 SDIAGTTRDAVDSPYT-YNGDKYVIIDTAGIRKKGKVY---ETTEKYSVLRALRAIERSD 259
Query: 460 VVALVIEAMACITEQ 474
VV +VI A I EQ
Sbjct: 260 VVLVVINAEEGIIEQ 274
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N ++G +R IV D G TRD + + +++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSLVNAILGEDRVIVSDIAGTTRDAVDSPYTYNGDKYVIIDTAGI--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIE S V++ +++ +
Sbjct: 234 -RKKGKVYE---------------TTEKYSVLR--------ALRAIERSDVVLVVINAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
G+ D++IA + + + +++ VNK ++ K + E F L ++P+
Sbjct: 270 GIIEQDKKIAGYAHE--AGRAVVIVVNKWDAIEKDEKTMKELEQKIREHFLFLSYAPI 325
>gi|289550746|ref|YP_003471650.1| GTP-binding protein EngA [Staphylococcus lugdunensis HKU09-01]
gi|289180278|gb|ADC87523.1| GTP-binding protein EngA [Staphylococcus lugdunensis HKU09-01]
Length = 436
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVG+PNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PVVAIVGKPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKTVVLAVNKVDNPEMK-TDIYDFYALGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K TED +E+ ++I+GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDEVVKHFNK--ETEDPYDEDT--IRLSIIGRPNVGKSSLVNAILGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE+T + Q + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYT-YDNQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 IVIDAEEGIIEQ 274
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAIDTEYTYDNQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLIVIDAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAVVIVVNKWDTVEKDSKTMKKF 309
>gi|212638926|ref|YP_002315446.1| GTP-binding protein EngA [Anoxybacillus flavithermus WK1]
gi|212560406|gb|ACJ33461.1| Predicted GTPase [Anoxybacillus flavithermus WK1]
Length = 449
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 146/314 (46%), Positives = 195/314 (62%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W F ++DTGG+
Sbjct: 17 PVVAIVGRPNVGKSTIFNRIVGERISIVEDVPGVTRDRIYSSAEWLNTTFNMIDTGGI-- 74
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E PL T+ I +QA AI+E+ VIIF+ +G+
Sbjct: 75 ----------------DIGDE--PLLTQ----------IRQQAEIAIDEADVIIFMTNGR 106
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAIS 340
G+TAADEE+A L ++ +K ++LAVNK ++P R+ I +F++LGF P+PIS
Sbjct: 107 DGVTAADEEVAKILYRS--NKPVVLAVNKIDNPDMRENIY---DFYTLGFGEPIPISGTH 161
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G+LLD V + K E E + + ++GRPNVGKSS++NA++GE+R IVS
Sbjct: 162 GLGIGDLLDAVVAHFPKRETKE----YDADVIKFCLIGRPNVGKSSLVNAILGEERVIVS 217
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I+GTTRDAIDT F +GQ++ +IDTAG+RKR + S TE SV RA +AI RSDV
Sbjct: 218 DIAGTTRDAIDTTFK-RDGQEYVIIDTAGMRKRGKVYES---TEKYSVLRALKAIERSDV 273
Query: 461 VALVIEAMACITEQ 474
V +VI A I EQ
Sbjct: 274 VLVVINAEEGIIEQ 287
>gi|229084606|ref|ZP_04216875.1| GTP-binding protein engA [Bacillus cereus Rock3-44]
gi|228698682|gb|EEL51398.1| GTP-binding protein engA [Bacillus cereus Rock3-44]
Length = 436
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 193/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSAGEWLNHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I +QA AI+ES VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PFLTQ----------IRQQAEVAIDESDVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ K ++LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 DGVTAADEEVAKILYRS--KKPVVLAVNKVDNPEMR-NDIYDFYALGFGEPFPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD K+E E+ ++E +++GRPNVGKSS++NAL+G++R IVS +
Sbjct: 151 GLGDLLDEAAKHFPKIE--EEAYDDET--IRFSLIGRPNVGKSSLVNALLGQERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT ++ +GQ + +IDTAG+RK+ + S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDTPYS-KDGQDYVIIDTAGMRKKGKVYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N L+G R IV + G TRD + +++++DT G+
Sbjct: 177 RFSLIGRPNVGKSSLVNALLGQERVIVSNVAGTTRDAVDTPYSKDGQDYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++DG+
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSE------FWSLGFSPLP- 335
G+ D++IA + + + +I+ VNK ++ +K M+ E F L ++P+
Sbjct: 270 GIIEQDKKIAGYAHDS--GRAVIIVVNKWDAVKKDEKTMKAFEENIRAHFQFLDYAPIVF 327
Query: 336 ISAISGTGTGELLDLV 351
+SA + T LL ++
Sbjct: 328 LSAKTKKRTQTLLPVI 343
>gi|433444814|ref|ZP_20409556.1| ribosome-associated GTPase EngA [Anoxybacillus flavithermus
TNO-09.006]
gi|432001354|gb|ELK22232.1| ribosome-associated GTPase EngA [Anoxybacillus flavithermus
TNO-09.006]
Length = 436
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 146/314 (46%), Positives = 195/314 (62%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERISIVEDVPGVTRDRIYSSAEWLNTTFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E PL T+ I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PLLTQ----------IRQQAEIAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAIS 340
G+TAADEE+A L ++ +K ++LAVNK ++P R+ I +F++LGF P+PIS
Sbjct: 94 DGVTAADEEVAKILYRS--NKPVVLAVNKIDNPDMRENIY---DFYTLGFGEPIPISGTH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G+LLD V + K E E + + ++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGIGDLLDAVVAHFPKRETKE----YDADVIKFCLIGRPNVGKSSLVNAILGEERVIVS 204
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I+GTTRDAIDT F +GQ++ +IDTAG+RKR + S TE SV RA +AI RSDV
Sbjct: 205 DIAGTTRDAIDTTFK-RDGQEYVIIDTAGMRKRGKVYES---TEKYSVLRALKAIERSDV 260
Query: 461 VALVIEAMACITEQ 474
V +VI A I EQ
Sbjct: 261 VLVVINAEEGIIEQ 274
>gi|116627238|ref|YP_819857.1| GTP-binding protein EngA [Streptococcus thermophilus LMD-9]
gi|122268159|sp|Q03MB1.1|DER_STRTD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|116100515|gb|ABJ65661.1| Predicted GTPase [Streptococcus thermophilus LMD-9]
Length = 436
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTSAEWLNRQFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAGIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K +K +ILAVNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVARILYKT--NKPVILAVNKVDNPEMR-ADIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L TE VEEEN I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAIVENLP----TE--VEEENPDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI+GTTRDAIDT F EGQ++ +IDTAG+RK + + TE SV R+ RAI RSDV
Sbjct: 204 PIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + E E+ ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + K II+ VNK ++ +K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIKKDNHTVANWEADIRDQFQFLSYAPI 325
>gi|228476619|ref|ZP_04061301.1| ribosome-associated GTPase EngA [Streptococcus salivarius SK126]
gi|228251814|gb|EEK10879.1| ribosome-associated GTPase EngA [Streptococcus salivarius SK126]
Length = 457
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 191/317 (60%), Gaps = 45/317 (14%)
Query: 160 EHL-LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
+H+ LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F L+DT
Sbjct: 20 KHMTLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTSAEWLNRQFSLIDT 79
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
GG+ +V A I+ QA A+ E+ VI+F
Sbjct: 80 GGIDDVD------------------------------APFMEQIKHQADIAMTEADVIVF 109
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPIS 337
+V G+ G+T ADE +A L K +K +ILAVNK ++P + +F+SLG P P+S
Sbjct: 110 VVSGKEGVTDADEYVARILYKT--NKPVILAVNKVDNPEMR-ADIYDFYSLGLGDPYPVS 166
Query: 338 AISGTGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDR 396
++ G GTG++LD + L TE VEEEN I +++GRPNVGKSS++NA++GEDR
Sbjct: 167 SVHGIGTGDVLDAIVENLP----TE--VEEENPDIIRFSLIGRPNVGKSSLINAILGEDR 220
Query: 397 TIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIR 456
I SPI+GTTRDAIDT F EGQ++ +IDTAG+RK + + TE SV R+ RAI
Sbjct: 221 VIASPIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAID 277
Query: 457 RSDVVALVIEAMACITE 473
RSD+V +VI A I E
Sbjct: 278 RSDIVLMVINAEEGIRE 294
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + E E+ ++DT G+
Sbjct: 197 RFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRK 256
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S +++ +++ +
Sbjct: 257 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDIVLMVINAE 289
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + K II+ VNK ++ +K V+ +F L ++P+
Sbjct: 290 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIKKDNHTVANWEADIRDQFQFLSYAPI 346
>gi|445372339|ref|ZP_21426109.1| GTP-binding protein Der [Streptococcus thermophilus MTCC 5460]
gi|445387322|ref|ZP_21427821.1| GTP-binding protein Der [Streptococcus thermophilus MTCC 5461]
gi|444751181|gb|ELW75947.1| GTP-binding protein Der [Streptococcus thermophilus MTCC 5461]
gi|444751296|gb|ELW76054.1| GTP-binding protein Der [Streptococcus thermophilus MTCC 5460]
Length = 436
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTSAEWLNRQFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAGIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K +K +ILAVNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVARILYKT--NKPVILAVNKVDNPEMR-ADIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L TE VEEEN I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAIVENLP----TE--VEEENPDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI+GTTRDAIDT F EGQ++ +IDTAG+RK + + TE SV R+ RAI RSDV
Sbjct: 204 PIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + E E+ ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + K II+ VNK ++ +K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIKKDNHTVANWETDIRDQFQFLSYAPI 325
>gi|258611783|ref|ZP_05711645.1| GTP-binding protein engA [Listeria monocytogenes FSL R2-503]
gi|258606169|gb|EEW18777.1| GTP-binding protein engA [Listeria monocytogenes FSL R2-503]
Length = 345
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 147/316 (46%), Positives = 189/316 (59%), Gaps = 50/316 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S +E I QA AI+E+ VIIF+ +G+
Sbjct: 62 -DLSDEPFLE---------------------------QIRAQAEIAIDEADVIIFITNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K I+LA+NK ++P Q+ +F+SLGF P PIS G
Sbjct: 94 EGVTDADEQVAKILYRS--NKPIVLAINKVDNPEMR-DQIYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIP----AIAIVGRPNVGKSSILNALVGEDRTI 398
G G++LD V + K EEE P +++GRPNVGKSSILNAL+GEDR I
Sbjct: 151 GLGDMLDAVRAHFPK--------EEEEEYPDDTVKFSLIGRPNVGKSSILNALLGEDRVI 202
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VS I+GTTRDAIDT +T +GQ + +IDTAG+RKR + S TE SV RA RAI RS
Sbjct: 203 VSDIAGTTRDAIDTTYTF-DGQDYVMIDTAGMRKRGKVYES---TEKYSVLRAMRAIERS 258
Query: 459 DVVALVIEAMACITEQ 474
DVV +VI A I EQ
Sbjct: 259 DVVLVVINAEEGIREQ 274
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS++ N L+G +R IV D G TRD + + +++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSILNALLGEDRVIVSDIAGTTRDAIDTTYTFDGQDYVMIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ +++ +
Sbjct: 234 -RKRGKVYE---------------STEKYSVLR--------AMRAIERSDVVLVVINAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + II+ VNK ++ K ++ +F L ++P+
Sbjct: 270 GIREQDKRIAGYAHD--AGRAIIIVVNKWDAINKDEKTINVWTEDIREQFQFLSYAPI 325
>gi|404418697|ref|ZP_11000464.1| GTP-binding protein Der [Staphylococcus arlettae CVD059]
gi|403489290|gb|EJY94868.1| GTP-binding protein Der [Staphylococcus arlettae CVD059]
Length = 436
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 191/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSTGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNIR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++P ++ +F++LGF P PIS G
Sbjct: 94 EGLTQSDEIVAQLLYKS--KKPVVLAVNKVDNPEMR-NEIYDFYALGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + K E ED +E+ ++I+GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GLGDLLDAVVTHFK--EDVEDPYDEDT--IRLSIIGRPNVGKSSLVNAILGEDRVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DTE++ + Q F LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAVDTEYS-YDDQNFVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
>gi|419707565|ref|ZP_14235048.1| GTP-binding protein engA [Streptococcus salivarius PS4]
gi|383282715|gb|EIC80696.1| GTP-binding protein engA [Streptococcus salivarius PS4]
Length = 436
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTSAEWLNRQFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVARILYKTH--KPVILAVNKVDNPEMR-ADIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L TE VEEEN I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAIVENLP----TE--VEEENPDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI+GTTRDAIDT F EGQ++ +IDTAG+RK + + TE SV R+ RAI RSD+
Sbjct: 204 PIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDRSDI 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + E E+ ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S +++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDIVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + K II+ VNK ++ +K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIKKDNHTVANWEADIRDQFQFLSYAPI 325
>gi|421451693|ref|ZP_15901054.1| GTP-binding protein [Streptococcus salivarius K12]
gi|400182124|gb|EJO16386.1| GTP-binding protein [Streptococcus salivarius K12]
Length = 460
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/317 (45%), Positives = 191/317 (60%), Gaps = 45/317 (14%)
Query: 160 EHL-LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
+H+ LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F L+DT
Sbjct: 23 KHMTLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTSAEWLNRQFSLIDT 82
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
GG+ +V A I+ QA A+ E+ VI+F
Sbjct: 83 GGIDDVD------------------------------APFMEQIKHQADIAMTEADVIVF 112
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPIS 337
+V G+ G+T ADE +A L K +K +ILAVNK ++P + +F+SLG P P+S
Sbjct: 113 VVSGKEGVTDADEYVARILYKT--NKPVILAVNKVDNPEMR-ADIYDFYSLGLGDPYPVS 169
Query: 338 AISGTGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDR 396
++ G GTG++LD + L TE VEEEN I +++GRPNVGKSS++NA++GEDR
Sbjct: 170 SVHGIGTGDVLDAIVENLP----TE--VEEENPDIIRFSLIGRPNVGKSSLINAILGEDR 223
Query: 397 TIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIR 456
I SPI+GTTRDAIDT F EGQ++ +IDTAG+RK + + TE SV R+ RAI
Sbjct: 224 VIASPIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAID 280
Query: 457 RSDVVALVIEAMACITE 473
RSDVV +VI A I E
Sbjct: 281 RSDVVLMVINAEEGIRE 297
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + E E+ ++DT G+
Sbjct: 200 RFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRK 259
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S V++ +++ +
Sbjct: 260 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDVVLMVINAE 292
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + K II+ VNK ++ +K V+ +F L ++P+
Sbjct: 293 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIKKDNHTVANWEADIREQFQFLSYAPI 349
>gi|260887150|ref|ZP_05898413.1| ribosome-associated GTPase EngA [Selenomonas sputigena ATCC 35185]
gi|330839080|ref|YP_004413660.1| ribosome-associated GTPase EngA [Selenomonas sputigena ATCC 35185]
gi|260863212|gb|EEX77712.1| ribosome-associated GTPase EngA [Selenomonas sputigena ATCC 35185]
gi|329746844|gb|AEC00201.1| ribosome-associated GTPase EngA [Selenomonas sputigena ATCC 35185]
Length = 442
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 147/312 (47%), Positives = 194/312 (62%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L +IV D PGVTRDR+Y + W EF ++DTGG
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLGRKRVSIVDDLPGVTRDRIYLDAEWLGKEFTMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I L T + + M +QA A+EE+ VI+FLVDG+
Sbjct: 61 ----------------------IELDTSDVILRSM----RQQAQIAMEEADVILFLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT ADEE+ LR K ++LAVNK +SP++ V EF++LG P+PISA +
Sbjct: 95 AGLTLADEEVGKMLRTT--KKPVLLAVNKIDSPKQE-SDVYEFYNLGLGDPVPISATNAM 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD + + EG E+ E+E+ +IA++GRPNVGKSS++NAL+GE+R IVS +
Sbjct: 152 NLGDLLDALVALFP--EGAEE--EKESDEISIAVIGRPNVGKSSLVNALLGEERVIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F E KF LIDTAG+R++ I + E SV RA RA+ R+DVV
Sbjct: 208 AGTTRDAIDTHFMA-EDTKFILIDTAGMRRKGKI---DAPIERYSVMRALRAVDRADVVL 263
Query: 463 LVIEAMACITEQ 474
+V++A A ITEQ
Sbjct: 264 VVLDATAGITEQ 275
>gi|417907892|ref|ZP_12551659.1| ribosome biogenesis GTPase Der [Staphylococcus capitis VCU116]
gi|341594979|gb|EGS37657.1| ribosome biogenesis GTPase Der [Staphylococcus capitis VCU116]
Length = 436
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 190/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVG+PNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++P + +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQMLYKS--KKPVVLAVNKVDNPEMR-NDIYDFYSLGFGDPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V E TED +E+ ++I+GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVVENFG--EETEDPYDEDT--IRLSIIGRPNVGKSSLVNAILGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DTE++ EGQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAVDTEYS-YEGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
++I+A I EQ
Sbjct: 263 VIIDAEQGIIEQ 274
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAVDTEYSYEGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVIIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K I++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTVEKDSKTMKKF 309
>gi|296133088|ref|YP_003640335.1| ribosome-associated GTPase EngA [Thermincola potens JR]
gi|296031666|gb|ADG82434.1| ribosome-associated GTPase EngA [Thermincola potens JR]
Length = 440
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 186/312 (59%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G AIV D+PGVTRDR+Y + W + EF LVDTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRIAGSRIAIVEDKPGVTRDRIYKDAVWLDKEFTLVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+D M +I +QA AIEE+ VI+F+VD +
Sbjct: 62 ------EFRDDK--------------------GSMSDLILQQARLAIEEAEVILFVVDAR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+GLTA DEE+A LR K +IL NK E G M V +F+ LG P+ +SA G
Sbjct: 96 SGLTATDEEVARMLRNT--KKPVILVANKVED-FTGNMDVYDFYRLGLGDPIMVSASHGL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V L + E + + IA++GRPNVGKSSI+NAL+GE+R IVS +
Sbjct: 153 NVGDLLDEVVKHLPEYAAE----EYGDDVIKIAVIGRPNVGKSSIVNALLGEERVIVSDV 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F GQ++ LIDTAG+RK+ I TE SV R+ +A+ RSDVV
Sbjct: 209 AGTTRDAIDTYFERG-GQRYLLIDTAGMRKKGKI---DEPTERYSVLRSLKAVDRSDVVL 264
Query: 463 LVIEAMACITEQ 474
++I+A +TEQ
Sbjct: 265 MIIDAQEVVTEQ 276
>gi|87303080|ref|ZP_01085878.1| GTP-binding protein EngA [Synechococcus sp. WH 5701]
gi|87282247|gb|EAQ74207.1| GTP-binding protein EngA [Synechococcus sp. WH 5701]
Length = 455
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 145/315 (46%), Positives = 188/315 (59%), Gaps = 45/315 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y FWG+ F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQEGFWGDRRFRVVDTGGLV 62
Query: 223 --NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ S+ P I E QA A+ E+ V + +V
Sbjct: 63 FDDDSEFLPEIRE-------------------------------QANLALAEASVAVVIV 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ GLT AD+ IADWLR + ++LAVNKCESP +G+ ++FW LG P +SAI
Sbjct: 92 DGQQGLTGADQAIADWLRGQKVP--VLLAVNKCESPDQGLAMAADFWGLGLGEPHAVSAI 149
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG+LLD V L E + +AI+GRPNVGKSS+LN++ GE R IV
Sbjct: 150 HGAGTGDLLDKVIGYLPTTPEEETEEPIQ-----LAIIGRPNVGKSSLLNSICGEARAIV 204
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SPI GTTRD IDT EG+ ++L+DTAGIR+R +++ E +NR+F+A+ RSD
Sbjct: 205 SPIRGTTRDTIDTTIE-REGKTWKLLDTAGIRRRRSVSYG---PEYFGINRSFKAVERSD 260
Query: 460 VVALVIEAMACITEQ 474
V LVI+A+ +TEQ
Sbjct: 261 VCVLVIDALDGVTEQ 275
>gi|313114942|ref|ZP_07800438.1| ribosome-associated GTPase EngA [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310622735|gb|EFQ06194.1| ribosome-associated GTPase EngA [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 447
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 188/312 (60%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN+L G AIV D PG+TRDR++ W H+F+LVDTGG+
Sbjct: 4 PIVAVVGRPNVGKSTLFNKLCGQRLAIVEDTPGITRDRIFANCEWNGHDFLLVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P EGI RE QA AI+ + II +VD +
Sbjct: 62 ----EPK-----------ATEGILAHMRE------------QAQIAIDTADCIIMVVDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGT 342
GLTAADE++A LR+++ K IILAVNKC+ M++ EF++LGF +PIS++ G
Sbjct: 95 DGLTAADEDVAHMLRRSH--KPIILAVNKCDKVGDAPMEMYEFYNLGFDEVMPISSVHGH 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD VC+ L E V EE+RIP +AI+GRPNVGKSS+ N ++GE+R IV+
Sbjct: 153 GTGDLLDAVCAHLDFSE----TVVEEDRIP-VAIIGRPNVGKSSLTNRILGENRMIVANE 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT G KF DTAG+RKR+ I E V RA A+ RS V
Sbjct: 208 AGTTRDAIDTPVDNAYG-KFIFTDTAGLRKRSNITDG---LERYMVVRALAAVERSRVAL 263
Query: 463 LVIEAMACITEQ 474
++++A TEQ
Sbjct: 264 ILVDATVGFTEQ 275
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 99/211 (46%), Gaps = 54/211 (25%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM-------YGRSFWGE 210
V E +P VAI+GRPNVGKS+L NR++G NR IV +E G TRD + YG+
Sbjct: 172 VEEDRIP-VAIIGRPNVGKSSLTNRILGENRMIVANEAGTTRDAIDTPVDNAYGK----- 225
Query: 211 HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAI 270
F+ DT G+ + + NI T G+E M+ R A AA+
Sbjct: 226 --FIFTDTAGL----RKRSNI--------TDGLE--------------RYMVVR-ALAAV 256
Query: 271 EESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE-- 325
E S V + LVD G T D ++A + K I+ VNK E M++
Sbjct: 257 ERSRVALILVDATVGFTEQDSKVAGYAHDQ--GKACIIVVNKWDAVEGKETNTMELQRRD 314
Query: 326 ----FWSLGFSPLP-ISAISGTGTGELLDLV 351
F +G++P+ ISA +G +L+ L+
Sbjct: 315 YAECFSFMGYAPIIFISAQTGYNVNKLMQLI 345
>gi|340398139|ref|YP_004727164.1| GTP-binding protein engA [Streptococcus salivarius CCHSS3]
gi|387761995|ref|YP_006068972.1| ribosome-associated GTPase EngA [Streptococcus salivarius 57.I]
gi|387783401|ref|YP_006069484.1| GTP-binding protein engA [Streptococcus salivarius JIM8777]
gi|418017162|ref|ZP_12656721.1| GTP-binding protein Der [Streptococcus salivarius M18]
gi|338742132|emb|CCB92637.1| GTP-binding protein engA [Streptococcus salivarius CCHSS3]
gi|338744283|emb|CCB94649.1| GTP-binding protein engA [Streptococcus salivarius JIM8777]
gi|339292762|gb|AEJ54109.1| ribosome-associated GTPase EngA [Streptococcus salivarius 57.I]
gi|345527855|gb|EGX31163.1| GTP-binding protein Der [Streptococcus salivarius M18]
Length = 436
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTSAEWLNRQFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K +K +ILAVNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVARILYKT--NKPVILAVNKVDNPEMR-ADIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L TE VEEEN I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAIVENLP----TE--VEEENPDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI+GTTRDAIDT F EGQ++ +IDTAG+RK + + TE SV R+ RAI RSD+
Sbjct: 204 PIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDRSDI 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + E E+ ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S +++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDIVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + K II+ VNK ++ +K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIKKDNHTVANWEADIRDQFQFLSYAPI 325
>gi|423068016|ref|ZP_17056804.1| GTP-binding protein engA [Streptococcus intermedius F0395]
gi|355366907|gb|EHG14620.1| GTP-binding protein engA [Streptococcus intermedius F0395]
Length = 436
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 186/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATAEWLNRKFSMIDTGGIN 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IIL VNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILVVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E V E + +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVENLPNEE-----VAENPDMIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 371 IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPE--GQKFRLIDTA 428
+P IAIVGRPNVGKS++ N + GE +IV + G TRD I + E +KF +IDT
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRI---YATAEWLNRKFSMIDTG 59
Query: 429 GIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQADW 477
GI A E + ++A A+ +DV+ V+ IT+ ++
Sbjct: 60 GINDVDA-----PFMEQIK-HQAEIAMDEADVIVFVVSGKEGITDADEY 102
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSE------FWSLGFSPLP 335
G+ D+ IA + + K II+ VNK ++ K MQ E F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTLEKDNKTMQNWEADIRDQFQYLSYAPIV 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L +++
Sbjct: 327 FVSALTKQRLHKLPEMI 343
>gi|223043265|ref|ZP_03613312.1| ribosome-associated GTPase EngA [Staphylococcus capitis SK14]
gi|222443476|gb|EEE49574.1| ribosome-associated GTPase EngA [Staphylococcus capitis SK14]
Length = 436
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 190/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVG+PNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++P + +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQMLYKS--KKPVLLAVNKVDNPEMR-NDIYDFYSLGFGDPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V E TED +E+ ++I+GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVVENFG--EETEDPYDEDT--IRLSIIGRPNVGKSSLVNAILGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DTE++ EGQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAVDTEYS-YEGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
++I+A I EQ
Sbjct: 263 VIIDAEQGIIEQ 274
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAVDTEYSYEGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVIIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K I++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTVEKDSKTMKKF 309
>gi|322373918|ref|ZP_08048453.1| ribosome-associated GTPase EngA [Streptococcus sp. C150]
gi|321277290|gb|EFX54360.1| ribosome-associated GTPase EngA [Streptococcus sp. C150]
Length = 436
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTSAEWLNRQFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVARILYKTH--KPVILAVNKVDNPEMR-ADIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L TE +EEEN I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAIVENLP----TE--IEEENPDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI+GTTRDAIDT F EGQ++ +IDTAG+RK + + TE SV R+ RAI RSD+
Sbjct: 204 PIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDRSDI 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + E E+ ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S +++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDIVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + K II+ VNK ++ +K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIKKDNHTVANWEADIREQFQFLSYAPI 325
>gi|423481490|ref|ZP_17458180.1| GTPase Der [Bacillus cereus BAG6X1-2]
gi|401144698|gb|EJQ52225.1| GTPase Der [Bacillus cereus BAG6X1-2]
Length = 436
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 194/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D PG+TRDR+Y W HEF ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGITRDRIYSAGEWLNHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PFLTQ----------IRQQAEVAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ K I+LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 DGVTAADEEVAKILYRS--KKPIVLAVNKVDNPEMR-SDIYDFYALGFGEPFPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + K+E E+ ++E +++GRPNVGKSS++NAL+G++R IVS I
Sbjct: 151 GLGDLLDEAANHFPKIE--EEAYDDET--IRFSLIGRPNVGKSSLVNALLGQERVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT ++ +GQ + +IDTAG+RK+ + S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDTPYS-KDGQDYVIIDTAGMRKKGKVYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N L+G R IV + G TRD + +++++DT G+
Sbjct: 177 RFSLIGRPNVGKSSLVNALLGQERVIVSNIAGTTRDAVDTPYSKDGQDYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++DG+
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D++IA + + + +I+ VNK ++ +K
Sbjct: 270 GIIEQDKKIAGYAHDS--GRAVIIVVNKWDAVKK 301
>gi|229029283|ref|ZP_04185373.1| GTP-binding protein engA [Bacillus cereus AH1271]
gi|229172241|ref|ZP_04299805.1| GTP-binding protein engA [Bacillus cereus MM3]
gi|423403884|ref|ZP_17381057.1| GTPase Der [Bacillus cereus BAG2X1-2]
gi|423460517|ref|ZP_17437314.1| GTPase Der [Bacillus cereus BAG5X2-1]
gi|423475486|ref|ZP_17452201.1| GTPase Der [Bacillus cereus BAG6X1-1]
gi|228611229|gb|EEK68487.1| GTP-binding protein engA [Bacillus cereus MM3]
gi|228732031|gb|EEL82923.1| GTP-binding protein engA [Bacillus cereus AH1271]
gi|401140570|gb|EJQ48126.1| GTPase Der [Bacillus cereus BAG5X2-1]
gi|401648028|gb|EJS65631.1| GTPase Der [Bacillus cereus BAG2X1-2]
gi|402435356|gb|EJV67390.1| GTPase Der [Bacillus cereus BAG6X1-1]
Length = 436
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 194/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D PG+TRDR+Y W HEF ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGITRDRIYSAGEWLNHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PFLTQ----------IRQQAEVAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ K I+LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 DGVTAADEEVAKILYRS--KKPIVLAVNKVDNPEMR-SDIYDFYALGFGEPFPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + K+E E+ ++E +++GRPNVGKSS++NAL+G++R IVS I
Sbjct: 151 GLGDLLDEAANHFPKIE--EEAYDDET--IRFSLIGRPNVGKSSLVNALLGQERVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT ++ +GQ + +IDTAG+RK+ + S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDTPYS-KDGQDYVIIDTAGMRKKGKVYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N L+G R IV + G TRD + +++++DT G+
Sbjct: 177 RFSLIGRPNVGKSSLVNALLGQERVIVSNIAGTTRDAVDTPYSKDGQDYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++DG+
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D++IA + + + +I+ VNK ++ +K
Sbjct: 270 GIIEQDKKIAGYAHDS--GRAVIIVVNKWDAVKK 301
>gi|422854874|ref|ZP_16901538.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK160]
gi|325696369|gb|EGD38260.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK160]
Length = 436
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATASWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E++ E + I +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIVENLP----NEEIAENPDMI-KFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|315658242|ref|ZP_07911114.1| ribosome-associated GTPase EngA [Staphylococcus lugdunensis M23590]
gi|385784374|ref|YP_005760547.1| putative GTPase [Staphylococcus lugdunensis N920143]
gi|418414048|ref|ZP_12987264.1| GTPase Der [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|418636088|ref|ZP_13198441.1| ribosome-associated GTPase EngA [Staphylococcus lugdunensis VCU139]
gi|315496571|gb|EFU84894.1| ribosome-associated GTPase EngA [Staphylococcus lugdunensis M23590]
gi|339894630|emb|CCB53914.1| putative GTPase [Staphylococcus lugdunensis N920143]
gi|374841186|gb|EHS04664.1| ribosome-associated GTPase EngA [Staphylococcus lugdunensis VCU139]
gi|410877686|gb|EKS25578.1| GTPase Der [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 436
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVG+PNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PVVAIVGKPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNPEMK-TDIYDFYALGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K TED +E+ ++I+GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDEVVKHFNK--ETEDPYDEDT--IRLSIIGRPNVGKSSLVNAILGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE+T + Q + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYT-YDNQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 IVIDAEEGIIEQ 274
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAIDTEYTYDNQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLIVIDAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAVVIVVNKWDTVEKDSKTMKKF 309
>gi|337747035|ref|YP_004641197.1| protein EngA [Paenibacillus mucilaginosus KNP414]
gi|336298224|gb|AEI41327.1| EngA [Paenibacillus mucilaginosus KNP414]
Length = 469
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 145/334 (43%), Positives = 201/334 (60%), Gaps = 49/334 (14%)
Query: 144 SGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMY 203
G+KQ++ K + P +AIVGRPNVGKS +FNR++G AIV D+PGVTRDR+Y
Sbjct: 17 GGRKQQREK----GMKRMARPVIAIVGRPNVGKSTIFNRIIGDKLAIVEDKPGVTRDRLY 72
Query: 204 GRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE 263
GR W + EF ++DTGG I +EG R V
Sbjct: 73 GRGEWLDQEFSIIDTGG--------------------IEIEGEDHILRSVRV-------- 104
Query: 264 RQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV 323
QA AIEE+ VIIF+VD +AG+T AD E+A L ++ K +++AVNK ++ ++ +
Sbjct: 105 -QAELAIEEADVIIFMVDAKAGVTPADSEVAQILFRS--QKPVVVAVNKVDNLQRA-DDI 160
Query: 324 SEFWSLGFSPL-PISAISGTGTGELLDLVCSELKKVEGTEDLVEEE--NRIPAIAIVGRP 380
EF+S+GF + IS GTG G+LL+ V D V+EE + +A++GRP
Sbjct: 161 YEFYSMGFGEIVGISGAHGTGIGDLLEEVVKHFP------DTVDEEYGEDVIRVALIGRP 214
Query: 381 NVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSG 440
NVGKSS++NA++GE+R IVS ++GTTRDAIDT F +GQK+ +IDTAG+RKR + +
Sbjct: 215 NVGKSSLVNAILGEERVIVSDMAGTTRDAIDTPFE-KDGQKYVIIDTAGMRKRGKVYEN- 272
Query: 441 STTEALSVNRAFRAIRRSDVVALVIEAMACITEQ 474
TE SV RA +AI R+DVV +VI+ I EQ
Sbjct: 273 --TEKYSVMRAMKAIERADVVLVVIDGEVGIIEQ 304
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 38/198 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G R IV D G TRD + +++++DT G+
Sbjct: 207 RVALIGRPNVGKSSLVNAILGEERVIVSDMAGTTRDAIDTPFEKDGQKYVIIDTAGMRKR 266
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + +V R A AIE + V++ ++DG+
Sbjct: 267 GKVYEN-------------------TEKYSVMR--------AMKAIERADVVLVVIDGEV 299
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE-----FWSLGFSPLP- 335
G+ D+ +A + + K + VNK E K + Q + F + ++P+
Sbjct: 300 GIIEQDKHVAGYAHE--AGKAAVFVVNKWDVVEKDEKTMHQFEQKIRDHFLFMTYAPVVF 357
Query: 336 ISAISGTGTGELLDLVCS 353
+SA + +LL +V +
Sbjct: 358 LSAKTKQRLHKLLPVVNT 375
>gi|229096095|ref|ZP_04227068.1| GTP-binding protein engA [Bacillus cereus Rock3-29]
gi|229102207|ref|ZP_04232916.1| GTP-binding protein engA [Bacillus cereus Rock3-28]
gi|229115051|ref|ZP_04244461.1| GTP-binding protein engA [Bacillus cereus Rock1-3]
gi|407703974|ref|YP_006827559.1| membrane spanning protein [Bacillus thuringiensis MC28]
gi|423380591|ref|ZP_17357875.1| GTPase Der [Bacillus cereus BAG1O-2]
gi|423443623|ref|ZP_17420529.1| GTPase Der [Bacillus cereus BAG4X2-1]
gi|423446123|ref|ZP_17423002.1| GTPase Der [Bacillus cereus BAG5O-1]
gi|423466714|ref|ZP_17443482.1| GTPase Der [Bacillus cereus BAG6O-1]
gi|423536111|ref|ZP_17512529.1| GTPase Der [Bacillus cereus HuB2-9]
gi|423538645|ref|ZP_17515036.1| GTPase Der [Bacillus cereus HuB4-10]
gi|423544883|ref|ZP_17521241.1| GTPase Der [Bacillus cereus HuB5-5]
gi|423618249|ref|ZP_17594083.1| GTPase Der [Bacillus cereus VD115]
gi|423625411|ref|ZP_17601189.1| GTPase Der [Bacillus cereus VD148]
gi|228668191|gb|EEL23623.1| GTP-binding protein engA [Bacillus cereus Rock1-3]
gi|228681108|gb|EEL35276.1| GTP-binding protein engA [Bacillus cereus Rock3-28]
gi|228687055|gb|EEL40960.1| GTP-binding protein engA [Bacillus cereus Rock3-29]
gi|401133216|gb|EJQ40849.1| GTPase Der [Bacillus cereus BAG5O-1]
gi|401177229|gb|EJQ84421.1| GTPase Der [Bacillus cereus HuB4-10]
gi|401183058|gb|EJQ90175.1| GTPase Der [Bacillus cereus HuB5-5]
gi|401253980|gb|EJR60216.1| GTPase Der [Bacillus cereus VD115]
gi|401255091|gb|EJR61316.1| GTPase Der [Bacillus cereus VD148]
gi|401631343|gb|EJS49140.1| GTPase Der [Bacillus cereus BAG1O-2]
gi|402412709|gb|EJV45062.1| GTPase Der [Bacillus cereus BAG4X2-1]
gi|402415424|gb|EJV47748.1| GTPase Der [Bacillus cereus BAG6O-1]
gi|402461536|gb|EJV93249.1| GTPase Der [Bacillus cereus HuB2-9]
gi|407381659|gb|AFU12160.1| GTP-binding protein engA [Bacillus thuringiensis MC28]
Length = 436
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 194/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D PG+TRDR+Y W HEF ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGITRDRIYSAGEWLNHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PFLTQ----------IRQQAEVAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ K I+LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 DGVTAADEEVAKILYRS--KKPIVLAVNKVDNPEMR-SDIYDFYALGFGEPFPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + K+E E+ ++E +++GRPNVGKSS++NAL+G++R IVS I
Sbjct: 151 GLGDLLDEAANHFPKIE--EEAYDDET--IRFSLIGRPNVGKSSLVNALLGQERVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT ++ +GQ + +IDTAG+RK+ + S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDTPYS-KDGQDYVIIDTAGMRKKGKVYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N L+G R IV + G TRD + +++++DT G+
Sbjct: 177 RFSLIGRPNVGKSSLVNALLGQERVIVSNIAGTTRDAVDTPYSKDGQDYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++DG+
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSE------FWSLGFSPLP- 335
G+ D++IA + + + +I+ VNK ++ +K M+ E F L ++P+
Sbjct: 270 GIIEQDKKIAGYAHDS--GRAVIIVVNKWDAVKKDEKTMKAFEENIRAHFQFLDYAPIVF 327
Query: 336 ISAISGTGTGELLDLV 351
+SA + T LL ++
Sbjct: 328 LSAKTKKRTQTLLPVI 343
>gi|422878177|ref|ZP_16924643.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1059]
gi|422928031|ref|ZP_16960973.1| ribosome-associated GTPase EngA [Streptococcus sanguinis ATCC
29667]
gi|422931027|ref|ZP_16963958.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK340]
gi|332367384|gb|EGJ45117.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1059]
gi|339617595|gb|EGQ22217.1| ribosome-associated GTPase EngA [Streptococcus sanguinis ATCC
29667]
gi|339620209|gb|EGQ24779.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK340]
Length = 436
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATASWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E V E + +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIVENLPNEE-----VAENPDMIKFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|423610032|ref|ZP_17585893.1| GTPase Der [Bacillus cereus VD107]
gi|401249349|gb|EJR55655.1| GTPase Der [Bacillus cereus VD107]
Length = 436
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 194/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D PG+TRDR+Y W HEF ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGITRDRIYSAGEWLNHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PFLTQ----------IRQQAEVAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ K I+LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 DGVTAADEEVAKILYRS--KKPIVLAVNKVDNPEMR-SDIYDFYALGFGEPFPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + K+E E+ ++E +++GRPNVGKSS++NAL+G++R IVS I
Sbjct: 151 GLGDLLDEAANHFPKIE--EEAYDDET--IRFSLIGRPNVGKSSLVNALLGQERVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT ++ +GQ + +IDTAG+RK+ + S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDTPYS-KDGQDYVIIDTAGMRKKGKVYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N L+G R IV + G TRD + +++++DT G+
Sbjct: 177 RFSLIGRPNVGKSSLVNALLGQERVIVSNIAGTTRDAVDTPYSKDGQDYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++DG+
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D++IA + + + +I+ VNK ++ +K
Sbjct: 270 GIIEQDKKIAGYAHDS--GRAVIIVVNKWDAVKK 301
>gi|289435286|ref|YP_003465158.1| GTPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|422419559|ref|ZP_16496514.1| ribosome-associated GTPase EngA [Listeria seeligeri FSL N1-067]
gi|422422654|ref|ZP_16499607.1| ribosome-associated GTPase EngA [Listeria seeligeri FSL S4-171]
gi|289171530|emb|CBH28074.1| GTPase family protein [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|313632616|gb|EFR99602.1| ribosome-associated GTPase EngA [Listeria seeligeri FSL N1-067]
gi|313637164|gb|EFS02696.1| ribosome-associated GTPase EngA [Listeria seeligeri FSL S4-171]
Length = 436
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 146/316 (46%), Positives = 190/316 (60%), Gaps = 50/316 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W +F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
DL+ + I QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------DLSDEPFL------------------EQIRAQAEIAIDEADVIIFITNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K I+LA+NK ++P Q+ +F+SLGF P PIS G
Sbjct: 94 EGVTDADEQVAKILYRS--NKPIVLAINKVDNPEMR-DQIYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIP----AIAIVGRPNVGKSSILNALVGEDRTI 398
G G++LD V + K EEE P +++GRPNVGKSSILNAL+GEDR I
Sbjct: 151 GLGDMLDAVRAHFPK--------EEEEEYPDDTVKFSLIGRPNVGKSSILNALLGEDRVI 202
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VS I+GTTRDAIDT +T +GQ + +IDTAG+RKR + S TE SV RA RAI RS
Sbjct: 203 VSDIAGTTRDAIDTTYTF-DGQDYVMIDTAGMRKRGKVYES---TEKYSVLRAMRAIERS 258
Query: 459 DVVALVIEAMACITEQ 474
DVV +VI A I EQ
Sbjct: 259 DVVLVVINAEEGIREQ 274
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS++ N L+G +R IV D G TRD + + +++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSILNALLGEDRVIVSDIAGTTRDAIDTTYTFDGQDYVMIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ +++ +
Sbjct: 234 -RKRGKVYE---------------STEKYSVLR--------AMRAIERSDVVLVVINAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + +I+ VNK ++ K ++ +F L ++P+
Sbjct: 270 GIREQDKRIAGYAHD--AGRAMIIVVNKWDAINKDEKTINVWTEDIREQFQFLSYAPI 325
>gi|422851042|ref|ZP_16897712.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK150]
gi|325695118|gb|EGD37020.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK150]
Length = 436
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATANWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E V E + +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIVENLPNEE-----VAENPDMIKFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|315223115|ref|ZP_07864983.1| ribosome-associated GTPase EngA [Streptococcus anginosus F0211]
gi|315187804|gb|EFU21551.1| ribosome-associated GTPase EngA [Streptococcus anginosus F0211]
Length = 436
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 135/314 (42%), Positives = 188/314 (59%), Gaps = 46/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS FNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTFFNRIAGERISIVEDVEGVTRDRIYATAEWLNRKFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ +I+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADIIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-SEIFDFYALGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTE--DLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
GTG++LD + L E E D+++ +++GRPNVGKSS++NA++GEDR I
Sbjct: 150 IGTGDILDAIVENLPNEEAVENPDMIK-------FSLIGRPNVGKSSLINAILGEDRVIA 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SP++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD
Sbjct: 203 SPVAGTTRDAIDTVFTDNEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSD 259
Query: 460 VVALVIEAMACITE 473
VV +V+ A I E
Sbjct: 260 VVLMVLNAEEGIRE 273
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTVFTDNEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSE------FWSLGFSPLP 335
G+ D+ IA + + K II+ VNK ++ K MQ E F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTLEKDNKTMQNWEADIRDQFQYLSYAPIV 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHQLPDMI 343
>gi|199598702|ref|ZP_03212116.1| GTP-binding protein EngA [Lactobacillus rhamnosus HN001]
gi|229552181|ref|ZP_04440906.1| GTP-binding protein EngA [Lactobacillus rhamnosus LMS2-1]
gi|258508385|ref|YP_003171136.1| GTP-binding protein EngA [Lactobacillus rhamnosus GG]
gi|258539596|ref|YP_003174095.1| GTP-binding protein EngA [Lactobacillus rhamnosus Lc 705]
gi|385828054|ref|YP_005865826.1| GTP-binding protein EngA [Lactobacillus rhamnosus GG]
gi|385835244|ref|YP_005873018.1| ribosome-associated GTPase EngA [Lactobacillus rhamnosus ATCC 8530]
gi|418070604|ref|ZP_12707879.1| GTP-binding protein Der [Lactobacillus rhamnosus R0011]
gi|421768970|ref|ZP_16205679.1| GTP-binding protein EngA [Lactobacillus rhamnosus LRHMDP2]
gi|421771233|ref|ZP_16207893.1| GTP-binding protein EngA [Lactobacillus rhamnosus LRHMDP3]
gi|423078073|ref|ZP_17066760.1| ribosome biogenesis GTPase Der [Lactobacillus rhamnosus ATCC 21052]
gi|199590390|gb|EDY98482.1| GTP-binding protein EngA [Lactobacillus rhamnosus HN001]
gi|229314483|gb|EEN80456.1| GTP-binding protein EngA [Lactobacillus rhamnosus LMS2-1]
gi|257148312|emb|CAR87285.1| GTP-binding protein EngA [Lactobacillus rhamnosus GG]
gi|257151272|emb|CAR90244.1| GTP-binding protein EngA [Lactobacillus rhamnosus Lc 705]
gi|259649699|dbj|BAI41861.1| GTP-binding protein EngA [Lactobacillus rhamnosus GG]
gi|355394735|gb|AER64165.1| ribosome-associated GTPase EngA [Lactobacillus rhamnosus ATCC 8530]
gi|357540024|gb|EHJ24041.1| GTP-binding protein Der [Lactobacillus rhamnosus R0011]
gi|357552453|gb|EHJ34226.1| ribosome biogenesis GTPase Der [Lactobacillus rhamnosus ATCC 21052]
gi|411185366|gb|EKS52494.1| GTP-binding protein EngA [Lactobacillus rhamnosus LRHMDP2]
gi|411185819|gb|EKS52945.1| GTP-binding protein EngA [Lactobacillus rhamnosus LRHMDP3]
Length = 435
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 142/314 (45%), Positives = 194/314 (61%), Gaps = 43/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AIVGRPNVGKS +FNR++G +IV D PGVTRDR+YG+S W EF ++DTGG+
Sbjct: 2 VLPTLAIVGRPNVGKSTIFNRILGERVSIVEDTPGVTRDRIYGKSEWLGKEFAVIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+G E P + I+ QA AI+E+ VI+FL
Sbjct: 62 ------------------DLGDE--PFL----------AQIKDQAEIAIDEADVILFLTS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+AG+T ADE +A L + +K ++LAVNK ++P + + +F+SLGF PLP+S
Sbjct: 92 IEAGVTDADERVAQILYR--ANKPVVLAVNKVDNPERR-QDIYDFYSLGFGEPLPLSGTH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD V + E +E++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GIGLGDVLDAVLAAFP----NEASADEDDSI-KFSLIGRPNVGKSSLVNAILGENRVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI GTTRDAIDT+F +G+ F +IDTAGIRKR + + TE +V RA RAI RSDV
Sbjct: 204 PIEGTTRDAIDTKFEA-DGETFTMIDTAGIRKRGKVYEN---TEKYAVMRALRAIDRSDV 259
Query: 461 VALVIEAMACITEQ 474
V VI A I EQ
Sbjct: 260 VLFVINAEEGIREQ 273
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 29/165 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N ++G NR IV G TRD + + F ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLVNAILGENRVIVSPIEGTTRDAIDTKFEADGETFTMIDTAGIRKR 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + AV R A AI+ S V++F+++ +
Sbjct: 236 GKVYEN-------------------TEKYAVMR--------ALRAIDRSDVVLFVINAEE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL 329
G+ D+++A + + + II+ VNK ++ K + +F +L
Sbjct: 269 GIREQDKKVAGYAHE--AGRGIIIVVNKWDTLEKDNRTMKDFENL 311
>gi|55820417|ref|YP_138859.1| GTP-binding protein EngA [Streptococcus thermophilus LMG 18311]
gi|55822299|ref|YP_140740.1| GTP-binding protein EngA [Streptococcus thermophilus CNRZ1066]
gi|81820353|sp|Q5M1D9.1|DER_STRT1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|81820516|sp|Q5M5X5.1|DER_STRT2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|55736402|gb|AAV60044.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
thermophilus LMG 18311]
gi|55738284|gb|AAV61925.1| GTP-binding protein, putative [Streptococcus thermophilus CNRZ1066]
Length = 436
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTSAEWLNRQFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAGIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K +K +ILAVNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVARILYKT--NKPVILAVNKVDNPEMR-ADIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L TE VEEEN I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAIVGNLP----TE--VEEENPDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI+GTTRDAIDT F EGQ++ +IDTAG+RK + + TE S+ R+ RAI RSDV
Sbjct: 204 PIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRKSGKVYEN---TEKYSIMRSMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 44/195 (22%)
Query: 155 IGNVPEHL------LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
+GN+P + + R +++GRPNVGKS+L N ++G +R I G TRD +
Sbjct: 160 VGNLPTEVEEENPDIIRFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTNFVD 219
Query: 209 GE-HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQAT 267
E E+ ++DT G+ K N T + ++ R +
Sbjct: 220 SEGQEYTMIDTAGMRKSGKVYEN-------------------TEKYSIMR--------SM 252
Query: 268 AAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--- 324
AI+ S V++ +++ + G+ D+ IA + + K II+ VNK ++ +K V+
Sbjct: 253 RAIDRSDVVLMVINAEEGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIKKDNHTVANWE 310
Query: 325 -----EFWSLGFSPL 334
+F L ++P+
Sbjct: 311 ADIRDQFQFLSYAPI 325
>gi|422822992|ref|ZP_16871180.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK405]
gi|422826928|ref|ZP_16875107.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK678]
gi|422854934|ref|ZP_16901592.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1]
gi|324993642|gb|EGC25561.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK405]
gi|324995046|gb|EGC26959.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK678]
gi|327462911|gb|EGF09232.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1]
Length = 436
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATASWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E V E + +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIVENLPNEE-----VAENPDMIKFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|365157682|ref|ZP_09353933.1| GTPase Der [Bacillus smithii 7_3_47FAA]
gi|363623053|gb|EHL74184.1| GTPase Der [Bacillus smithii 7_3_47FAA]
Length = 436
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 192/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W HEF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERISIVEDVPGVTRDRIYSSAEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I +QA AI+E+ VIIFL +G+
Sbjct: 62 ----------------EIGDE--PFLEQ----------IRQQAEIAIDEADVIIFLTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ +K ++LAVNK ++P + + +F++LGF P PIS G
Sbjct: 94 EGVTAADEEVAKILYRS--NKPVVLAVNKIDNPDMRDV-IYDFYALGFGEPFPISGAHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K E ++ + ++GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GLGDLLDEVVKRFPKSSKQE----YDDDVIKFCLIGRPNVGKSSLVNAILGEDRVIVSDV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+D+ +T GQK+ +IDTAG++K+ + S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDSPYTY-NGQKYVIIDTAGMKKKGKVYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIREQ 274
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ ++GRPNVGKS+L N ++G +R IV D G TRD + + +++++DT G+
Sbjct: 177 KFCLIGRPNVGKSSLVNAILGEDRVIVSDVAGTTRDAVDSPYTYNGQKYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + + E +T + +V R A AIE S V++ +++ +
Sbjct: 234 -KKKGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVVLNAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D++IA + + K I++ VNK ++ K ++EF
Sbjct: 270 GIREQDKKIAGYAHE--AGKGIVIVVNKWDAVEKDEKTMNEF 309
>gi|386086009|ref|YP_006001883.1| GTP-binding protein engA [Streptococcus thermophilus ND03]
gi|386343953|ref|YP_006040117.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
thermophilus JIM 8232]
gi|387909112|ref|YP_006339418.1| GTP-binding protein engA [Streptococcus thermophilus MN-ZLW-002]
gi|312277722|gb|ADQ62379.1| GTP-binding protein engA [Streptococcus thermophilus ND03]
gi|339277414|emb|CCC19162.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
thermophilus JIM 8232]
gi|387574047|gb|AFJ82753.1| GTP-binding protein engA [Streptococcus thermophilus MN-ZLW-002]
Length = 436
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTSAEWLNRQFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAGIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K +K +ILAVNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVARILYKT--NKPVILAVNKVDNPEMR-ADIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L TE VEEEN I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAIVENLP----TE--VEEENPDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI+GTTRDAIDT F EGQ++ +IDTAG+RK + + TE S+ R+ RAI RSDV
Sbjct: 204 PIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRKSGKVYEN---TEKYSIMRSMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + E E+ ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + ++ R + AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSIMR--------SMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + K II+ VNK ++ +K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIKKDNHTVANWEADIRDQFQFLSYAPI 325
>gi|242373782|ref|ZP_04819356.1| GTP-binding protein EngA [Staphylococcus epidermidis M23864:W1]
gi|242348519|gb|EES40121.1| GTP-binding protein EngA [Staphylococcus epidermidis M23864:W1]
Length = 436
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVG+PNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++P + +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQMLYKS--KKPVVLAVNKVDNPEMR-NDIYDFYSLGFGDPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V E TED +E+ ++I+GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVVENFG--EETEDPYDEDT--IRLSIIGRPNVGKSSLVNAILGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DTE+T E Q + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAVDTEYT-YEDQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAVDTEYTYEDQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K I++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTVEKDSKTMKKF 309
>gi|418964718|ref|ZP_13516507.1| ribosome-associated GTPase EngA [Streptococcus constellatus subsp.
constellatus SK53]
gi|383344429|gb|EID22594.1| ribosome-associated GTPase EngA [Streptococcus constellatus subsp.
constellatus SK53]
Length = 436
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 186/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATAEWLNRKFSMIDTGGIN 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IIL VNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILVVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E V E + +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVENLPNEE-----VAENPDMIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDNEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 371 IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPE--GQKFRLIDTA 428
+P IAIVGRPNVGKS++ N + GE +IV + G TRD I + E +KF +IDT
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRI---YATAEWLNRKFSMIDTG 59
Query: 429 GIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQADW 477
GI A E + ++A A+ +DV+ V+ IT+ ++
Sbjct: 60 GINDVDA-----PFMEQIK-HQAEIAMDEADVIVFVVSGKEGITDADEY 102
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTVFTDNEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSE------FWSLGFSPLP 335
G+ D+ IA + + K II+ VNK ++ K MQ E F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTLEKDNKTMQNWEADIRDQFQYLSYAPIV 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L +++
Sbjct: 327 FVSALTKQRLHKLPEMI 343
>gi|323350996|ref|ZP_08086653.1| ribosome-associated GTPase EngA [Streptococcus sanguinis VMC66]
gi|322122720|gb|EFX94429.1| ribosome-associated GTPase EngA [Streptococcus sanguinis VMC66]
Length = 436
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATANWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E V E + +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIVENLPNEE-----VAENPDMIKFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|421490439|ref|ZP_15937811.1| ribosome-associated GTPase EngA [Streptococcus anginosus SK1138]
gi|400372929|gb|EJP25864.1| ribosome-associated GTPase EngA [Streptococcus anginosus SK1138]
Length = 436
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 135/314 (42%), Positives = 188/314 (59%), Gaps = 46/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS FNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTFFNRIAGERISIVEDVEGVTRDRIYATAEWLNRKFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ +I+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADIIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-SEIFDFYALGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTE--DLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
GTG++LD + L E E D+++ +++GRPNVGKSS++NA++GEDR I
Sbjct: 150 IGTGDILDAIVENLPNEEAVENPDMIK-------FSLIGRPNVGKSSLINAILGEDRVIA 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SP++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD
Sbjct: 203 SPVAGTTRDAIDTVFTDNEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSD 259
Query: 460 VVALVIEAMACITE 473
VV +V+ A I E
Sbjct: 260 VVLMVLNAEEGIRE 273
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTVFTDNEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSE------FWSLGFSPL 334
G+ D+ IA + + K II+ VNK ++ K MQ E F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTLEKDNKTMQNWEADIRDQFQYLSYAPI 325
>gi|407795537|ref|ZP_11142495.1| GTP-binding protein Der [Salimicrobium sp. MJ3]
gi|407019878|gb|EKE32592.1| GTP-binding protein Der [Salimicrobium sp. MJ3]
Length = 436
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 148/314 (47%), Positives = 193/314 (61%), Gaps = 50/314 (15%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNRLVG +IV D PGVTRDR+Y + W H F ++DTGG+
Sbjct: 6 VAIVGRPNVGKSTIFNRLVGERISIVEDTPGVTRDRIYADAEWLNHTFHVIDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E PL + A QA AIEES VIIF+V+G+ G
Sbjct: 62 --------------ELGDE--PLLVQMRA----------QAEIAIEESDVIIFMVNGRDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAISGT 342
+TAADEE++ L K+ +K ++LAVNK ++P R+ I EF+SLGF P PIS G
Sbjct: 96 ITAADEEVSKLLFKS--NKPVVLAVNKVDNPEMRESIY---EFYSLGFGDPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEE--ENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G+LLD + DL EE ++ +++GRPNVGKSS++N+L+G++R IVS
Sbjct: 151 GLGDLLDETITHFP------DLPEEVEDDETIRFSVIGRPNVGKSSLINSLLGQERVIVS 204
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I+GTTRDA+DT FT + Q F +IDTAG+RKR + S TE SV RA +AI RSDV
Sbjct: 205 DIAGTTRDAVDTSFT-RDDQDFVIIDTAGMRKRGKVYES---TEKYSVMRALKAIERSDV 260
Query: 461 VALVIEAMACITEQ 474
V +I+A I EQ
Sbjct: 261 VLALIDADTGIQEQ 274
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N L+G R IV D G TRD + + +F+++DT G+
Sbjct: 177 RFSVIGRPNVGKSSLINSLLGQERVIVSDIAGTTRDAVDTSFTRDDQDFVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ L+D
Sbjct: 234 -RKRGKVYE---------------STEKYSVMR--------ALKAIERSDVVLALIDADT 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D++IA + + K +++ VNK ++ K + EF
Sbjct: 270 GIQEQDKKIAGYAHE--AGKSVVIVVNKWDTIDKDETSIKEF 309
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI--DTEFTGPEGQKFRLIDT 427
R +AIVGRPNVGKS+I N LVGE +IV G TRD I D E+ F +IDT
Sbjct: 2 RKSTVAIVGRPNVGKSTIFNRLVGERISIVEDTPGVTRDRIYADAEWL---NHTFHVIDT 58
Query: 428 AGI 430
GI
Sbjct: 59 GGI 61
>gi|423397682|ref|ZP_17374883.1| GTPase Der [Bacillus cereus BAG2X1-1]
gi|423408540|ref|ZP_17385689.1| GTPase Der [Bacillus cereus BAG2X1-3]
gi|401649728|gb|EJS67306.1| GTPase Der [Bacillus cereus BAG2X1-1]
gi|401657630|gb|EJS75138.1| GTPase Der [Bacillus cereus BAG2X1-3]
Length = 436
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 193/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D PG+TRDR+Y W HEF ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGITRDRIYSAGEWLNHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PFLTQ----------IRQQAEVAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ K I+LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 DGVTAADEEVAKILYRS--KKPIVLAVNKVDNPEMR-SDIYDFYALGFGEPFPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD K+E E+ ++E +++GRPNVGKSS++NAL+G++R IVS I
Sbjct: 151 GLGDLLDEAAKHFPKIE--EEAYDDET--IRFSLIGRPNVGKSSLVNALLGQERVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT ++ +GQ + +IDTAG+RK+ + S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDTPYS-KDGQDYVIIDTAGMRKKGKVYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N L+G R IV + G TRD + +++++DT G+
Sbjct: 177 RFSLIGRPNVGKSSLVNALLGQERVIVSNIAGTTRDAVDTPYSKDGQDYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++DG+
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D++IA + + + +I+ VNK ++ +K
Sbjct: 270 GIIEQDKKIAGYAHDS--GRAVIIVVNKWDAVKK 301
>gi|228990617|ref|ZP_04150582.1| GTP-binding protein engA [Bacillus pseudomycoides DSM 12442]
gi|228996716|ref|ZP_04156353.1| GTP-binding protein engA [Bacillus mycoides Rock3-17]
gi|228763035|gb|EEM11945.1| GTP-binding protein engA [Bacillus mycoides Rock3-17]
gi|228769143|gb|EEM17741.1| GTP-binding protein engA [Bacillus pseudomycoides DSM 12442]
Length = 436
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 193/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSAGEWLNHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PFLTQ----------IRQQAEVAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ K ++LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 DGVTAADEEVAKILYRS--KKPVVLAVNKVDNPEMR-NDIYDFYALGFGEPFPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD K+E E+ ++E +++GRPNVGKSS++NAL+G++R IVS +
Sbjct: 151 GLGDLLDEAAKHFPKIE--EEAYDDET--IRFSLIGRPNVGKSSLVNALLGQERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT ++ +GQ + +IDTAG+RK+ + S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDTPYS-KDGQDYVIIDTAGMRKKGKVYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N L+G R IV + G TRD + +++++DT G+
Sbjct: 177 RFSLIGRPNVGKSSLVNALLGQERVIVSNVAGTTRDAVDTPYSKDGQDYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++DG+
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSE------FWSLGFSPLP- 335
G+ D++IA + + + +I+ VNK ++ +K M+ E F L ++P+
Sbjct: 270 GIIEQDKKIAGYAHDS--GRAVIIVVNKWDAVKKDEKTMKAFEENIRAHFQFLDYAPIVF 327
Query: 336 ISAISGTGTGELLDLV 351
+SA + T LL ++
Sbjct: 328 LSAKTKKRTQTLLPVI 343
>gi|366086020|ref|ZP_09452505.1| GTP-binding protein Der [Lactobacillus zeae KCTC 3804]
Length = 435
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 194/314 (61%), Gaps = 43/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AIVGRPNVGKS +FNR++G +IV D PGVTRDR+YG+S W EF ++DTGG+
Sbjct: 2 VLPTLAIVGRPNVGKSTIFNRILGERVSIVEDTPGVTRDRIYGKSEWLGKEFAVIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+G E P S I+ QA AIEE+ VI+FL
Sbjct: 62 ------------------DLGDE--PFL----------SQIKDQAEIAIEEADVILFLTS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+AG+T ADE +A L + K ++LAVNK ++P + + +F+SLGF P P+S
Sbjct: 92 VEAGVTDADERVAQILYR--AKKPVVLAVNKVDNPERR-QDIYDFYSLGFGEPFPLSGTH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD V + K + VE+++ +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GIGLGDVLDAVLAVFPKEANS---VEDDS--IKFSLIGRPNVGKSSLVNAILGENRVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI GTTRDAIDT+F +G+ F +IDTAGIRKR + + TE +V RA RAI RSDV
Sbjct: 204 PIEGTTRDAIDTKFE-TDGETFTMIDTAGIRKRGKVYEN---TEKYAVLRALRAIDRSDV 259
Query: 461 VALVIEAMACITEQ 474
V +VI A I EQ
Sbjct: 260 VLVVINAEEGIREQ 273
>gi|347549336|ref|YP_004855664.1| hypothetical protein LIV_1917 [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346982407|emb|CBW86403.1| Putative unknown protein [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 436
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 146/316 (46%), Positives = 189/316 (59%), Gaps = 50/316 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W +F ++DTGG
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKDFNIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + P + I QA AI+E+ VIIF+ +G+
Sbjct: 61 -----------------IDLSDEPFLEQ----------IRAQAEIAIDEADVIIFITNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K I+LA+NK ++P Q+ +F+SLGF P PIS G
Sbjct: 94 EGVTDADEQVAKILYRS--NKPIVLAINKVDNPEMR-DQIYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIP----AIAIVGRPNVGKSSILNALVGEDRTI 398
G G++LD V + K EEE P +++GRPNVGKSSILNAL+GEDR I
Sbjct: 151 GLGDMLDAVRAHFPK--------EEEEDYPDDTVKFSLIGRPNVGKSSILNALLGEDRVI 202
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VS I+GTTRDAIDT +T +GQ + +IDTAG+RKR + S TE SV RA RAI RS
Sbjct: 203 VSDIAGTTRDAIDTTYTF-DGQDYVMIDTAGMRKRGKVYES---TEKYSVLRAMRAIERS 258
Query: 459 DVVALVIEAMACITEQ 474
DVV +VI A I EQ
Sbjct: 259 DVVLVVINAEEGIREQ 274
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS++ N L+G +R IV D G TRD + + +++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSILNALLGEDRVIVSDIAGTTRDAIDTTYTFDGQDYVMIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ +++ +
Sbjct: 234 -RKRGKVYE---------------STEKYSVLR--------AMRAIERSDVVLVVINAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + II+ VNK ++ K ++ +F L ++P+
Sbjct: 270 GIREQDKRIAGYAHD--AGRAIIIVVNKWDAINKDEKTINVWTEDIREQFQFLSYAPI 325
>gi|42780705|ref|NP_977952.1| GTP-binding protein EngA [Bacillus cereus ATCC 10987]
gi|402553015|ref|YP_006594286.1| GTP-binding protein Der [Bacillus cereus FRI-35]
gi|81831124|sp|Q73AZ1.1|DER_BACC1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|42736625|gb|AAS40560.1| GTPase family protein [Bacillus cereus ATCC 10987]
gi|401794225|gb|AFQ08084.1| GTP-binding protein Der [Bacillus cereus FRI-35]
Length = 436
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 194/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSAGEWLNHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PFLTQ----------IRQQAEVAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ +K ++LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 DGVTAADEEVAKILYRS--NKPVVLAVNKVDNPEMR-SDIYDFYALGFGEPFPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD K+E ED +E+ +++GRPNVGKSS++NAL+G++R IVS +
Sbjct: 151 GLGDLLDEAAQHFPKIE--EDGYDEDT--IRFSLIGRPNVGKSSLVNALLGQERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT ++ +G+ + +IDTAG+RK+ + S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDTPYS-KDGKDYVIIDTAGMRKKGKVYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N L+G R IV + G TRD + +++++DT G+
Sbjct: 177 RFSLIGRPNVGKSSLVNALLGQERVIVSNVAGTTRDAVDTPYSKDGKDYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++DG+
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D++IA + + + +++ VNK ++ +K
Sbjct: 270 GIIEQDKKIAGYAHDS--GRAVVIVVNKWDAVKK 301
>gi|157150518|ref|YP_001449828.1| GTP-binding protein EngA [Streptococcus gordonii str. Challis
substr. CH1]
gi|189037167|sp|A8AVL8.1|DER_STRGC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|157075312|gb|ABV09995.1| GTP-binding protein engA [Streptococcus gordonii str. Challis
substr. CH1]
Length = 436
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATADWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E V E + +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIVENLPNEE-----VAENPDMIKFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|404329834|ref|ZP_10970282.1| GTP-binding protein Der [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 438
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 191/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VGG AIV D+PGVTRDR+YG W HEF ++DTGG+
Sbjct: 4 PTVAIVGRPNVGKSTVFNRIVGGRTAIVEDKPGVTRDRLYGNGEWLNHEFHVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E PL + A QA A++ES VI+FLVDG+
Sbjct: 62 ----------------EIGDE--PLLGQMRA----------QAEIAVDESDVIVFLVDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A LR++ K +++ VNK ++ + + V EF++LG PLP+S G
Sbjct: 94 TGMTDADEQVAQILRRS--GKPVVVGVNKLDNYAQRNL-VYEFYTLGLGDPLPLSGAHGM 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V E E E++ A++GRPNVGKSS+ NA++G++R IVS I
Sbjct: 151 GLGDLLDAVIERFP--EAAER--SEQSDAIRFALIGRPNVGKSSLTNAILGKERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAID+EF+ +GQ F ++DTAGIR+R + TE SV RA AI SDVV
Sbjct: 207 AGTTRDAIDSEFS-RDGQDFIIVDTAGIRRRGRVYEK---TEKYSVLRAQHAIEESDVVV 262
Query: 463 LVIEAMACITEQ 474
LVI+ I EQ
Sbjct: 263 LVIDGEEGIIEQ 274
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 42/198 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R A++GRPNVGKS+L N ++G R IV D G TRD + +F++VDT G+
Sbjct: 177 RFALIGRPNVGKSSLTNAILGKERVIVSDIAGTTRDAIDSEFSRDGQDFIIVDTAGI--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIEES V++ ++DG+
Sbjct: 234 -RRRGRVYE---------------KTEKYSVLR--------AQHAIEESDVVVLVIDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESP----------RKGIMQVSEFWSLGFSPL 334
G+ D++IA + + +I+AVNK ++ RK I EF L ++P+
Sbjct: 270 GIIEQDKKIAGYAHD--AGRGMIIAVNKWDAVAKDDKTQDRFRKKIR--DEFQFLSYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++G +LL ++
Sbjct: 326 IFLSALTGKRVPQLLPVI 343
>gi|339641454|ref|ZP_08662898.1| ribosome-associated GTPase EngA [Streptococcus sp. oral taxon 056
str. F0418]
gi|339454723|gb|EGP67338.1| ribosome-associated GTPase EngA [Streptococcus sp. oral taxon 056
str. F0418]
Length = 436
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATADWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E V E + +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIVENLPNEE-----VAENPDMIKFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|298246134|ref|ZP_06969940.1| ribosome-associated GTPase EngA [Ktedonobacter racemifer DSM 44963]
gi|297553615|gb|EFH87480.1| ribosome-associated GTPase EngA [Ktedonobacter racemifer DSM 44963]
Length = 474
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 144/314 (45%), Positives = 192/314 (61%), Gaps = 26/314 (8%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P VAIVGRPNVGKS FNR++G AIV D PG TRDR+YG + W EF L+DTGG+
Sbjct: 1 MKPLVAIVGRPNVGKSTFFNRMIGERVAIVEDMPGTTRDRLYGDADWNGREFTLIDTGGL 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+L +G G+ + + QA AIEE+ VI+F+VD
Sbjct: 61 ------------ELGTGIPVGQVGL-----TGQSGDIMDHVMSQAQLAIEEADVIVFMVD 103
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
++G+TAAD+E+AD LR+ K +ILA NK ++ + + V EF+SLG P IS+I
Sbjct: 104 ARSGITAADDEVADLLRRR-ATKPVILAANKADNAERR-LDVVEFYSLGLGEPTDISSIQ 161
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTGTG+LLD + L +E+ E+++ P IAIVGRPNVGKSS+LNA++G +R+IVS
Sbjct: 162 GTGTGDLLDRIVEALPPF--SEEDEAEDDQTPRIAIVGRPNVGKSSLLNAILGVNRSIVS 219
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDTE + QK +L+DTAGI G E SV R+ RAI R DV
Sbjct: 220 DIPGTTRDAIDTELEFGD-QKIKLVDTAGI---RRRGRVGVGVEKYSVLRSTRAIERCDV 275
Query: 461 VALVIEAMACITEQ 474
++I+A +T Q
Sbjct: 276 ALMLIDASEGLTAQ 289
>gi|139474375|ref|YP_001129091.1| GTP-binding protein EngA [Streptococcus pyogenes str. Manfredo]
gi|166225865|sp|A2RGB0.1|DER_STRPG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|134272622|emb|CAM30889.1| GTP-binding protein EngA [Streptococcus pyogenes str. Manfredo]
Length = 436
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 185/313 (59%), Gaps = 42/313 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDIEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E EE + I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDVLDAIVENLPVEEA-----EENDDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RS V
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSGV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|229160554|ref|ZP_04288549.1| GTP-binding protein engA [Bacillus cereus R309803]
gi|228622964|gb|EEK79795.1| GTP-binding protein engA [Bacillus cereus R309803]
Length = 438
Score = 231 bits (588), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 194/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 6 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSAGDWLNHEFNIIDTGGI-- 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I +QA AI+E+ VIIF+ +G+
Sbjct: 64 ----------------DIGDE--PFLTQ----------IRQQAEVAIDEADVIIFMTNGR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ +K ++LAVNK ++P + +F++LGF P PIS G
Sbjct: 96 DGVTAADEEVAKILYRS--NKPVVLAVNKVDNPEMR-SDIYDFYALGFGEPFPISGTHGL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD K+E ED +E+ +++GRPNVGKSS++NAL+G++R IVS +
Sbjct: 153 GLGDLLDEAAQHFPKIE--EDGYDEDT--IRFSLIGRPNVGKSSLVNALLGQERVIVSNV 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT ++ +G+ + +IDTAG+RK+ + S TE SV RA RAI RSDVV
Sbjct: 209 AGTTRDAVDTPYS-KDGKDYVIIDTAGMRKKGKVYES---TEKYSVLRALRAIERSDVVL 264
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 265 VVLDGEEGIIEQ 276
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N L+G R IV + G TRD + +++++DT G+
Sbjct: 179 RFSLIGRPNVGKSSLVNALLGQERVIVSNVAGTTRDAVDTPYSKDGKDYVIIDTAGM--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++DG+
Sbjct: 236 -RKKGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVVLDGEE 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D++IA + + + +++ VNK ++ +K
Sbjct: 272 GIIEQDKKIAGYAHDS--GRAVVIVVNKWDAVKK 303
>gi|30019652|ref|NP_831283.1| GTP-binding protein EngA [Bacillus cereus ATCC 14579]
gi|30261599|ref|NP_843976.1| GTP-binding protein EngA [Bacillus anthracis str. Ames]
gi|47526799|ref|YP_018148.1| GTP-binding protein EngA [Bacillus anthracis str. 'Ames Ancestor']
gi|47565966|ref|ZP_00237004.1| GTP-binding protein, Era/ThdF family [Bacillus cereus G9241]
gi|49184431|ref|YP_027683.1| GTP-binding protein EngA [Bacillus anthracis str. Sterne]
gi|49477254|ref|YP_035720.1| GTP-binding protein EngA [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52143844|ref|YP_082984.1| GTP-binding protein EngA [Bacillus cereus E33L]
gi|65318869|ref|ZP_00391828.1| COG1160: Predicted GTPases [Bacillus anthracis str. A2012]
gi|118477058|ref|YP_894209.1| GTP-binding protein EngA [Bacillus thuringiensis str. Al Hakam]
gi|165869461|ref|ZP_02214120.1| GTPase family protein [Bacillus anthracis str. A0488]
gi|167633435|ref|ZP_02391760.1| GTPase family protein [Bacillus anthracis str. A0442]
gi|167639189|ref|ZP_02397462.1| GTPase family protein [Bacillus anthracis str. A0193]
gi|170686176|ref|ZP_02877398.1| GTPase family protein [Bacillus anthracis str. A0465]
gi|170706475|ref|ZP_02896935.1| GTPase family protein [Bacillus anthracis str. A0389]
gi|177650444|ref|ZP_02933411.1| GTPase family protein [Bacillus anthracis str. A0174]
gi|190568605|ref|ZP_03021510.1| ribosome-associated GTPase EngA [Bacillus anthracis str.
Tsiankovskii-I]
gi|196033560|ref|ZP_03100972.1| ribosome-associated GTPase EngA [Bacillus cereus W]
gi|196038987|ref|ZP_03106294.1| ribosome-associated GTPase EngA [Bacillus cereus NVH0597-99]
gi|196046647|ref|ZP_03113871.1| ribosome-associated GTPase EngA [Bacillus cereus 03BB108]
gi|206970720|ref|ZP_03231672.1| ribosome-associated GTPase EngA [Bacillus cereus AH1134]
gi|206974925|ref|ZP_03235840.1| ribosome-associated GTPase EngA [Bacillus cereus H3081.97]
gi|217959081|ref|YP_002337629.1| GTP-binding protein EngA [Bacillus cereus AH187]
gi|218231181|ref|YP_002366284.1| GTP-binding protein EngA [Bacillus cereus B4264]
gi|218902715|ref|YP_002450549.1| GTP-binding protein EngA [Bacillus cereus AH820]
gi|222095233|ref|YP_002529293.1| GTP-binding protein enga [Bacillus cereus Q1]
gi|225863467|ref|YP_002748845.1| ribosome-associated GTPase EngA [Bacillus cereus 03BB102]
gi|227815649|ref|YP_002815658.1| GTP-binding protein EngA [Bacillus anthracis str. CDC 684]
gi|228914177|ref|ZP_04077795.1| GTP-binding protein engA [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228920314|ref|ZP_04083661.1| GTP-binding protein engA [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228926634|ref|ZP_04089703.1| GTP-binding protein engA [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228932889|ref|ZP_04095756.1| GTP-binding protein engA [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228945203|ref|ZP_04107559.1| GTP-binding protein engA [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228951980|ref|ZP_04114077.1| GTP-binding protein engA [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228957879|ref|ZP_04119619.1| GTP-binding protein engA [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228984682|ref|ZP_04144855.1| GTP-binding protein engA [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229043348|ref|ZP_04191066.1| GTP-binding protein engA [Bacillus cereus AH676]
gi|229069156|ref|ZP_04202447.1| GTP-binding protein engA [Bacillus cereus F65185]
gi|229078786|ref|ZP_04211339.1| GTP-binding protein engA [Bacillus cereus Rock4-2]
gi|229090565|ref|ZP_04221800.1| GTP-binding protein engA [Bacillus cereus Rock3-42]
gi|229109059|ref|ZP_04238659.1| GTP-binding protein engA [Bacillus cereus Rock1-15]
gi|229121146|ref|ZP_04250383.1| GTP-binding protein engA [Bacillus cereus 95/8201]
gi|229126917|ref|ZP_04255928.1| GTP-binding protein engA [Bacillus cereus BDRD-Cer4]
gi|229138297|ref|ZP_04266892.1| GTP-binding protein engA [Bacillus cereus BDRD-ST26]
gi|229144202|ref|ZP_04272616.1| GTP-binding protein engA [Bacillus cereus BDRD-ST24]
gi|229149801|ref|ZP_04278030.1| GTP-binding protein engA [Bacillus cereus m1550]
gi|229155169|ref|ZP_04283281.1| GTP-binding protein engA [Bacillus cereus ATCC 4342]
gi|229178011|ref|ZP_04305383.1| GTP-binding protein engA [Bacillus cereus 172560W]
gi|229183798|ref|ZP_04311015.1| GTP-binding protein engA [Bacillus cereus BGSC 6E1]
gi|229189685|ref|ZP_04316699.1| GTP-binding protein engA [Bacillus cereus ATCC 10876]
gi|229195804|ref|ZP_04322564.1| GTP-binding protein engA [Bacillus cereus m1293]
gi|229602142|ref|YP_002866007.1| GTP-binding protein EngA [Bacillus anthracis str. A0248]
gi|254683091|ref|ZP_05146952.1| GTP-binding protein EngA [Bacillus anthracis str. CNEVA-9066]
gi|254723679|ref|ZP_05185465.1| GTP-binding protein EngA [Bacillus anthracis str. A1055]
gi|254734440|ref|ZP_05192152.1| GTP-binding protein EngA [Bacillus anthracis str. Western North
America USA6153]
gi|254740851|ref|ZP_05198539.1| GTP-binding protein EngA [Bacillus anthracis str. Kruger B]
gi|254755089|ref|ZP_05207123.1| GTP-binding protein EngA [Bacillus anthracis str. Vollum]
gi|254759626|ref|ZP_05211650.1| GTP-binding protein EngA [Bacillus anthracis str. Australia 94]
gi|296502173|ref|YP_003663873.1| GTP-binding protein EngA [Bacillus thuringiensis BMB171]
gi|300117468|ref|ZP_07055258.1| GTP-binding protein EngA [Bacillus cereus SJ1]
gi|301053141|ref|YP_003791352.1| GTP-binding protein EngA [Bacillus cereus biovar anthracis str. CI]
gi|375283578|ref|YP_005104016.1| GTPase family protein [Bacillus cereus NC7401]
gi|376265446|ref|YP_005118158.1| GTP-binding protein EngA like protein [Bacillus cereus F837/76]
gi|384179536|ref|YP_005565298.1| GTP-binding protein Der [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|386735307|ref|YP_006208488.1| GTP-binding protein engA [Bacillus anthracis str. H9401]
gi|421507283|ref|ZP_15954204.1| GTP-binding protein Der [Bacillus anthracis str. UR-1]
gi|421638613|ref|ZP_16079208.1| GTP-binding protein Der [Bacillus anthracis str. BF1]
gi|423353915|ref|ZP_17331541.1| GTPase Der [Bacillus cereus IS075]
gi|423371584|ref|ZP_17348924.1| GTPase Der [Bacillus cereus AND1407]
gi|423414710|ref|ZP_17391830.1| GTPase Der [Bacillus cereus BAG3O-2]
gi|423423679|ref|ZP_17400710.1| GTPase Der [Bacillus cereus BAG3X2-2]
gi|423429508|ref|ZP_17406512.1| GTPase Der [Bacillus cereus BAG4O-1]
gi|423435090|ref|ZP_17412071.1| GTPase Der [Bacillus cereus BAG4X12-1]
gi|423504805|ref|ZP_17481396.1| GTPase Der [Bacillus cereus HD73]
gi|423552662|ref|ZP_17528989.1| GTPase Der [Bacillus cereus ISP3191]
gi|423569482|ref|ZP_17545728.1| GTPase Der [Bacillus cereus MSX-A12]
gi|423576680|ref|ZP_17552799.1| GTPase Der [Bacillus cereus MSX-D12]
gi|423579796|ref|ZP_17555907.1| GTPase Der [Bacillus cereus VD014]
gi|423588014|ref|ZP_17564101.1| GTPase Der [Bacillus cereus VD045]
gi|423606693|ref|ZP_17582586.1| GTPase Der [Bacillus cereus VD102]
gi|423629536|ref|ZP_17605284.1| GTPase Der [Bacillus cereus VD154]
gi|423637745|ref|ZP_17613398.1| GTPase Der [Bacillus cereus VD156]
gi|423643352|ref|ZP_17618970.1| GTPase Der [Bacillus cereus VD166]
gi|423647530|ref|ZP_17623100.1| GTPase Der [Bacillus cereus VD169]
gi|423654384|ref|ZP_17629683.1| GTPase Der [Bacillus cereus VD200]
gi|449088391|ref|YP_007420832.1| GTP-binding protein EngA [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|37999522|sp|Q81FR5.1|DER_BACCR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|37999526|sp|Q81SW9.1|DER_BACAN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|81824337|sp|Q63DM8.1|DER_BACCZ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|81828346|sp|Q6HL51.1|DER_BACHK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166224305|sp|A0RBV9.1|DER_BACAH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|226741128|sp|B7JGY9.1|DER_BACC0 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|226741130|sp|B7HHQ7.1|DER_BACC4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|226741131|sp|B7HL14.1|DER_BACC7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783135|sp|C3P591.1|DER_BACAA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783136|sp|C3L9F4.1|DER_BACAC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783137|sp|C1EN01.1|DER_BACC3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783138|sp|B9IVM6.1|DER_BACCQ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|29895196|gb|AAP08484.1| GTP-binding protein [Bacillus cereus ATCC 14579]
gi|30255453|gb|AAP25462.1| ribosome-associated GTPase EngA [Bacillus anthracis str. Ames]
gi|47501947|gb|AAT30623.1| GTPase family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|47556883|gb|EAL15213.1| GTP-binding protein, Era/ThdF family [Bacillus cereus G9241]
gi|49178358|gb|AAT53734.1| GTPase family protein [Bacillus anthracis str. Sterne]
gi|49328810|gb|AAT59456.1| GTP-binding protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|51977313|gb|AAU18863.1| GTP-binding protein [Bacillus cereus E33L]
gi|118416283|gb|ABK84702.1| GTP-binding protein [Bacillus thuringiensis str. Al Hakam]
gi|164714901|gb|EDR20419.1| GTPase family protein [Bacillus anthracis str. A0488]
gi|167512979|gb|EDR88352.1| GTPase family protein [Bacillus anthracis str. A0193]
gi|167531473|gb|EDR94151.1| GTPase family protein [Bacillus anthracis str. A0442]
gi|170128573|gb|EDS97440.1| GTPase family protein [Bacillus anthracis str. A0389]
gi|170669873|gb|EDT20614.1| GTPase family protein [Bacillus anthracis str. A0465]
gi|172083588|gb|EDT68648.1| GTPase family protein [Bacillus anthracis str. A0174]
gi|190560205|gb|EDV14185.1| ribosome-associated GTPase EngA [Bacillus anthracis str.
Tsiankovskii-I]
gi|195993994|gb|EDX57950.1| ribosome-associated GTPase EngA [Bacillus cereus W]
gi|196022580|gb|EDX61263.1| ribosome-associated GTPase EngA [Bacillus cereus 03BB108]
gi|196030132|gb|EDX68732.1| ribosome-associated GTPase EngA [Bacillus cereus NVH0597-99]
gi|206734356|gb|EDZ51526.1| ribosome-associated GTPase EngA [Bacillus cereus AH1134]
gi|206746944|gb|EDZ58336.1| ribosome-associated GTPase EngA [Bacillus cereus H3081.97]
gi|217067748|gb|ACJ81998.1| ribosome-associated GTPase EngA [Bacillus cereus AH187]
gi|218159138|gb|ACK59130.1| ribosome-associated GTPase EngA [Bacillus cereus B4264]
gi|218536841|gb|ACK89239.1| ribosome-associated GTPase EngA [Bacillus cereus AH820]
gi|221239291|gb|ACM12001.1| GTP-binding protein [Bacillus cereus Q1]
gi|225788315|gb|ACO28532.1| ribosome-associated GTPase EngA [Bacillus cereus 03BB102]
gi|227004060|gb|ACP13803.1| ribosome-associated GTPase EngA [Bacillus anthracis str. CDC 684]
gi|228587701|gb|EEK45759.1| GTP-binding protein engA [Bacillus cereus m1293]
gi|228593734|gb|EEK51539.1| GTP-binding protein engA [Bacillus cereus ATCC 10876]
gi|228599647|gb|EEK57250.1| GTP-binding protein engA [Bacillus cereus BGSC 6E1]
gi|228605499|gb|EEK62948.1| GTP-binding protein engA [Bacillus cereus 172560W]
gi|228628296|gb|EEK85011.1| GTP-binding protein engA [Bacillus cereus ATCC 4342]
gi|228633665|gb|EEK90265.1| GTP-binding protein engA [Bacillus cereus m1550]
gi|228639210|gb|EEK95626.1| GTP-binding protein engA [Bacillus cereus BDRD-ST24]
gi|228645189|gb|EEL01426.1| GTP-binding protein engA [Bacillus cereus BDRD-ST26]
gi|228656517|gb|EEL12344.1| GTP-binding protein engA [Bacillus cereus BDRD-Cer4]
gi|228662265|gb|EEL17868.1| GTP-binding protein engA [Bacillus cereus 95/8201]
gi|228674337|gb|EEL29581.1| GTP-binding protein engA [Bacillus cereus Rock1-15]
gi|228692768|gb|EEL46492.1| GTP-binding protein engA [Bacillus cereus Rock3-42]
gi|228704468|gb|EEL56901.1| GTP-binding protein engA [Bacillus cereus Rock4-2]
gi|228713908|gb|EEL65792.1| GTP-binding protein engA [Bacillus cereus F65185]
gi|228725996|gb|EEL77235.1| GTP-binding protein engA [Bacillus cereus AH676]
gi|228775076|gb|EEM23469.1| GTP-binding protein engA [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228801795|gb|EEM48672.1| GTP-binding protein engA [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228807705|gb|EEM54227.1| GTP-binding protein engA [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228814438|gb|EEM60703.1| GTP-binding protein engA [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228826810|gb|EEM72577.1| GTP-binding protein engA [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228833010|gb|EEM78578.1| GTP-binding protein engA [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228839337|gb|EEM84631.1| GTP-binding protein engA [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228845510|gb|EEM90543.1| GTP-binding protein engA [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229266550|gb|ACQ48187.1| ribosome-associated GTPase EngA [Bacillus anthracis str. A0248]
gi|296323225|gb|ADH06153.1| GTP-binding protein EngA [Bacillus thuringiensis BMB171]
gi|298725303|gb|EFI65955.1| GTP-binding protein EngA [Bacillus cereus SJ1]
gi|300375310|gb|ADK04214.1| GTP-binding protein EngA [Bacillus cereus biovar anthracis str. CI]
gi|324325620|gb|ADY20880.1| GTP-binding protein Der [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|358352104|dbj|BAL17276.1| GTPase family protein [Bacillus cereus NC7401]
gi|364511246|gb|AEW54645.1| GTP-binding protein EngA like protein [Bacillus cereus F837/76]
gi|384385159|gb|AFH82820.1| GTP-binding protein engA [Bacillus anthracis str. H9401]
gi|401088261|gb|EJP96452.1| GTPase Der [Bacillus cereus IS075]
gi|401097630|gb|EJQ05652.1| GTPase Der [Bacillus cereus BAG3O-2]
gi|401101295|gb|EJQ09285.1| GTPase Der [Bacillus cereus AND1407]
gi|401115369|gb|EJQ23222.1| GTPase Der [Bacillus cereus BAG3X2-2]
gi|401121814|gb|EJQ29603.1| GTPase Der [Bacillus cereus BAG4O-1]
gi|401125328|gb|EJQ33088.1| GTPase Der [Bacillus cereus BAG4X12-1]
gi|401186604|gb|EJQ93692.1| GTPase Der [Bacillus cereus ISP3191]
gi|401206470|gb|EJR13261.1| GTPase Der [Bacillus cereus MSX-A12]
gi|401207676|gb|EJR14455.1| GTPase Der [Bacillus cereus MSX-D12]
gi|401217251|gb|EJR23945.1| GTPase Der [Bacillus cereus VD014]
gi|401227751|gb|EJR34280.1| GTPase Der [Bacillus cereus VD045]
gi|401241518|gb|EJR47906.1| GTPase Der [Bacillus cereus VD102]
gi|401267403|gb|EJR73463.1| GTPase Der [Bacillus cereus VD154]
gi|401273006|gb|EJR78994.1| GTPase Der [Bacillus cereus VD156]
gi|401275356|gb|EJR81323.1| GTPase Der [Bacillus cereus VD166]
gi|401285484|gb|EJR91323.1| GTPase Der [Bacillus cereus VD169]
gi|401295895|gb|EJS01518.1| GTPase Der [Bacillus cereus VD200]
gi|401822935|gb|EJT22084.1| GTP-binding protein Der [Bacillus anthracis str. UR-1]
gi|402455327|gb|EJV87110.1| GTPase Der [Bacillus cereus HD73]
gi|403394140|gb|EJY91381.1| GTP-binding protein Der [Bacillus anthracis str. BF1]
gi|449022148|gb|AGE77311.1| GTP-binding protein EngA [Bacillus thuringiensis serovar kurstaki
str. HD73]
Length = 436
Score = 231 bits (588), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 194/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSAGEWLNHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PFLTQ----------IRQQAEVAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ +K ++LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 DGVTAADEEVAKILYRS--NKPVVLAVNKVDNPEMR-SDIYDFYALGFGEPFPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD K+E ED +E+ +++GRPNVGKSS++NAL+G++R IVS +
Sbjct: 151 GLGDLLDEAAQHFPKIE--EDGYDEDT--IRFSLIGRPNVGKSSLVNALLGQERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT ++ +G+ + +IDTAG+RK+ + S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDTPYS-KDGKDYVIIDTAGMRKKGKVYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N L+G R IV + G TRD + +++++DT G+
Sbjct: 177 RFSLIGRPNVGKSSLVNALLGQERVIVSNVAGTTRDAVDTPYSKDGKDYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++DG+
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D++IA + + + +++ VNK ++ +K
Sbjct: 270 GIIEQDKKIAGYAHDS--GRAVVIVVNKWDAVKK 301
>gi|418027696|ref|ZP_12666313.1| GTP-binding protein [Streptococcus thermophilus CNCM I-1630]
gi|354690084|gb|EHE90040.1| GTP-binding protein [Streptococcus thermophilus CNCM I-1630]
Length = 436
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 187/313 (59%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTSAEWLNRQFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAGIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVARILYKT--NKPVILVVNKVDNPEMR-ADIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L TE VEEEN I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAIVENLP----TE--VEEENPDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI+GTTRDAIDT F EGQ++ +IDTAG+RK + + TE SV R+ RAI RSDV
Sbjct: 204 PIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + E E+ ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + K II+ VNK ++ +K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIKKDNHTVANWEADIRDQFQFLSYAPI 325
>gi|312862558|ref|ZP_07722800.1| ribosome biogenesis GTPase Der [Streptococcus vestibularis F0396]
gi|322517433|ref|ZP_08070306.1| ribosome-associated GTPase EngA [Streptococcus vestibularis ATCC
49124]
gi|311101963|gb|EFQ60164.1| ribosome biogenesis GTPase Der [Streptococcus vestibularis F0396]
gi|322123915|gb|EFX95474.1| ribosome-associated GTPase EngA [Streptococcus vestibularis ATCC
49124]
Length = 436
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTSAEWLNRQFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K +K +ILAVNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVARILYKT--NKPVILAVNKVDNPEMR-ADIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L TE VEEEN I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAIVENLP----TE--VEEENPDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI+GTTRDAIDT F +GQ++ +IDTAG+RK + + TE SV R+ RAI RSD+
Sbjct: 204 PIAGTTRDAIDTNFVDSDGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDRSDI 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + + E+ ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTNFVDSDGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S +++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDIVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + K II+ VNK ++ +K VS +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIKKDNHTVSNWEADIRDQFQFLSYAPI 325
>gi|22537760|ref|NP_688611.1| GTP-binding protein EngA [Streptococcus agalactiae 2603V/R]
gi|76788647|ref|YP_330237.1| GTP-binding protein EngA [Streptococcus agalactiae A909]
gi|76798461|ref|ZP_00780699.1| GTP-binding protein engA [Streptococcus agalactiae 18RS21]
gi|77408494|ref|ZP_00785232.1| GTP-binding protein, Era/ThdF family [Streptococcus agalactiae
COH1]
gi|77411928|ref|ZP_00788259.1| GTP-binding protein, Era/ThdF family [Streptococcus agalactiae
CJB111]
gi|406710001|ref|YP_006764727.1| GTP-binding protein EngA [Streptococcus agalactiae GD201008-001]
gi|421148062|ref|ZP_15607734.1| GTP-binding protein Der [Streptococcus agalactiae GB00112]
gi|424048933|ref|ZP_17786484.1| GTP-binding protein Der [Streptococcus agalactiae ZQ0910]
gi|41017044|sp|Q8DY73.1|DER_STRA5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123601399|sp|Q3JZR6.1|DER_STRA1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|22534651|gb|AAN00484.1|AE014265_13 phosphoglycerate dehydrogenase-related protein [Streptococcus
agalactiae 2603V/R]
gi|76563704|gb|ABA46288.1| GTP-binding protein EngA, putative [Streptococcus agalactiae A909]
gi|76586195|gb|EAO62715.1| GTP-binding protein engA [Streptococcus agalactiae 18RS21]
gi|77162025|gb|EAO73005.1| GTP-binding protein, Era/ThdF family [Streptococcus agalactiae
CJB111]
gi|77172936|gb|EAO76067.1| GTP-binding protein, Era/ThdF family [Streptococcus agalactiae
COH1]
gi|389649702|gb|EIM71178.1| GTP-binding protein Der [Streptococcus agalactiae ZQ0910]
gi|401685400|gb|EJS81408.1| GTP-binding protein Der [Streptococcus agalactiae GB00112]
gi|406650886|gb|AFS46287.1| GTP-binding protein EngA [Streptococcus agalactiae GD201008-001]
Length = 436
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/316 (43%), Positives = 187/316 (59%), Gaps = 48/316 (15%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+ E+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQADIAMTEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L K +K +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSRILYKT--NKPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPLSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAI---AIVGRPNVGKSSILNALVGEDRT 397
G GTG++LD + L VEEEN P I +++GRPNVGKSS++NA++GEDR
Sbjct: 149 GIGTGDILDAIVENLP--------VEEENENPDIIRFSLIGRPNVGKSSLINAILGEDRV 200
Query: 398 IVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRR 457
I SP++GTTRDAIDT F +GQ++ +IDTAG+RK + + TE SV R+ RAI R
Sbjct: 201 IASPVAGTTRDAIDTNFVDSQGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDR 257
Query: 458 SDVVALVIEAMACITE 473
SDVV +VI A I E
Sbjct: 258 SDVVLMVINAEEGIRE 273
>gi|366088528|ref|ZP_09455001.1| GTP-binding protein Der, partial [Lactobacillus acidipiscis KCTC
13900]
Length = 450
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 186/313 (59%), Gaps = 44/313 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA VGRPNVGKS +FNR+ G +IV D PGVTRDR+Y S W F ++DTGG
Sbjct: 18 PVVAFVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYAHSEWLGQNFDIIDTGG--- 74
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + PL T+ I QA AI+E+ VI+ +V Q
Sbjct: 75 -----------------IEISNEPLITQ----------ITEQAKIAIDEADVIVAIVSVQ 107
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADEE+A L ++ DK +ILAVNK ++P + Q+ +F+SLG P+P+S G
Sbjct: 108 EGVTDADEEVAQILYQS--DKPVILAVNKVDNP-EARSQIYDFYSLGLGDPIPVSGTHGI 164
Query: 343 GTGELLDLVCSEL-KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG+LLD +C+ K E ED + +GRPNVGKSS++N+++GE+R IVS
Sbjct: 165 GTGDLLDKICASFPAKTENDED------STIKFSFIGRPNVGKSSLVNSILGENRVIVSG 218
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRDAIDT+F+ G ++ +IDTAGIRKR + + TE SV RA RAI RSDVV
Sbjct: 219 IEGTTRDAIDTKFSTENGTEYTMIDTAGIRKRGKVYEN---TEKYSVLRAMRAIDRSDVV 275
Query: 462 ALVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 276 CVVLNAEEGIREQ 288
>gi|312866411|ref|ZP_07726629.1| ribosome biogenesis GTPase Der [Streptococcus downei F0415]
gi|311098105|gb|EFQ56331.1| ribosome biogenesis GTPase Der [Streptococcus downei F0415]
Length = 436
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/306 (43%), Positives = 184/306 (60%), Gaps = 42/306 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y ++ W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ ES VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTESDVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILAVNK ++P + +F++LG P P+S+ G
Sbjct: 93 KEGVTDADEYVAKILYRTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGDPYPVSSTHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L K E ++ I +++GRPNVGKSS++NAL+GEDR I SP
Sbjct: 150 IGTGDVLDAIVENLPKQED-----DDNPDIIKFSLIGRPNVGKSSLINALLGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT+F EGQ++ +IDTAG+RK + + TE S+ R+ RAI RSDVV
Sbjct: 205 VAGTTRDAIDTDFVDEEGQEYTMIDTAGMRKSGKVYEN---TEKYSIMRSMRAIDRSDVV 261
Query: 462 ALVIEA 467
+VI A
Sbjct: 262 LMVINA 267
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 371 IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPE--GQKFRLIDTA 428
+P +AIVGRPNVGKS++ N + GE +IV + G TRD I +T E ++F LIDT
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRI---YTKAEWLNRQFSLIDTG 59
Query: 429 GIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQADW 477
GI A E + ++A A+ SDV+ V+ +T+ ++
Sbjct: 60 GIDDVDA-----PFMEQIK-HQADIAMTESDVIVFVVSGKEGVTDADEY 102
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 40/180 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N L+G +R I G TRD + F E E+ ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINALLGEDRVIASPVAGTTRDAI-DTDFVDEEGQEYTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + ++ R + AI+ S V++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSIMR--------SMRAIDRSDVVLMVINA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K S+ F L ++P+
Sbjct: 268 EEGIRDYDKRIAGFAHE--AGKGIVIVVNKWDTIKKDNHTTSKWEEDIRDNFQFLSYAPI 325
>gi|357038543|ref|ZP_09100340.1| GTP-binding protein engA [Desulfotomaculum gibsoniae DSM 7213]
gi|355359335|gb|EHG07097.1| GTP-binding protein engA [Desulfotomaculum gibsoniae DSM 7213]
Length = 442
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/310 (45%), Positives = 193/310 (62%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNR+VGG AIV PGVTRDR+Y + W F LVDTGG+
Sbjct: 12 VAIVGRPNVGKSTLFNRIVGGRVAIVEGVPGVTRDRLYQDAEWNNRWFTLVDTGGLDYQD 71
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + + S I +QA AIEE+ +++F+VD +AG
Sbjct: 72 EGE-----------------------------IVSHIRKQAELAIEEADLVLFVVDARAG 102
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
L DE++A LR++ +K +IL NK E K + ++ +F+ LG PLP+SA G T
Sbjct: 103 LNGTDEDVARVLRRS--EKPVILVANKVEHFDK-VHELYDFYRLGLGEPLPVSAAEGLNT 159
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD + EL E ED EE+ + IA++GRPNVGKSS++NAL+GE+R IVS I G
Sbjct: 160 GDLLDRLVQELPPAE--EDETEED--VIKIAVIGRPNVGKSSLVNALLGEERVIVSNIPG 215
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAID+ T + K+ +IDTAGIR+R+ I G +TE SV R+ RA+ RSD+V ++
Sbjct: 216 TTRDAIDSYITRGD-NKYSIIDTAGIRRRSKI---GLSTEKYSVIRSLRAVDRSDIVLML 271
Query: 465 IEAMACITEQ 474
I+A+ +T+Q
Sbjct: 272 IDAVEQLTDQ 281
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++GRPNVGKS+L N L+G R IV + PG TRD + G++++ ++DT G+
Sbjct: 184 KIAVIGRPNVGKSSLVNALLGEERVIVSNIPGTTRDAIDSYITRGDNKYSIIDTAGIRRR 243
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK I L+T + +V R + A++ S +++ L+D
Sbjct: 244 SK-------------------IGLSTEKYSVIR--------SLRAVDRSDIVLMLIDAVE 276
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSP----LP 335
LT D+ IA + + + IL VNK + K + + LGF L
Sbjct: 277 QLTDQDKRIAGYAHEK--GRASILVVNKWDLVEKDDRTANRYIENLRDGLGFMQYAPVLF 334
Query: 336 ISAISGTGTGELLDLV 351
+SA++ +L+LV
Sbjct: 335 VSALTHQRVHRVLELV 350
>gi|253576396|ref|ZP_04853726.1| ribosome-associated GTPase EngA [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844289|gb|EES72307.1| ribosome-associated GTPase EngA [Paenibacillus sp. oral taxon 786
str. D14]
Length = 442
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 195/312 (62%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR++G AIV D+PG+TRDR+YG S W F ++DTGG+
Sbjct: 6 PVVAIVGRPNVGKSTIFNRIIGDRLAIVEDKPGITRDRIYGASEWNGKPFSIIDTGGI-E 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ +P I +I M QA AIEE+ VI+F+ D +
Sbjct: 65 LDDEEP-------ILKSIRM---------------------QAELAIEEADVIVFMCDAK 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+T +DEE+A+ L ++ K +I+AVNK ++ + I + EF++LGF P+ +S GT
Sbjct: 97 AGVTTSDEEVANLLYRS--GKPVIVAVNKVDNIGR-IDNIYEFYNLGFGEPIGVSGSHGT 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + L ++ E ++ + +A++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 154 GIGDLLDAIADNLPELADD----EYDDDVIRVALIGRPNVGKSSLVNAILGEERVIVSDI 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F +GQ++ LIDTAG+RKR + TTE SV RA +AI R+DVV
Sbjct: 210 AGTTRDAIDTPFE-KDGQRYVLIDTAGMRKRGKVY---ETTEKYSVMRAMKAIERADVVL 265
Query: 463 LVIEAMACITEQ 474
++I I EQ
Sbjct: 266 VLINGEEGIIEQ 277
>gi|229918701|ref|YP_002887347.1| GTP-binding protein EngA [Exiguobacterium sp. AT1b]
gi|229470130|gb|ACQ71902.1| small GTP-binding protein [Exiguobacterium sp. AT1b]
Length = 436
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/317 (44%), Positives = 198/317 (62%), Gaps = 50/317 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P VAIVGRPN+GKS +FNR++G +IV D+PGVTRDR+YG W +F L+DTGG+
Sbjct: 3 IPVVAIVGRPNIGKSTIFNRIIGDRVSIVDDKPGVTRDRIYGTGEWLNRKFHLIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+G E + + R QA AI+E+ VIIF+V+G
Sbjct: 62 -----------------EVGDEPLLVQMRH------------QAELAIDEADVIIFMVNG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSEFWSLGFS-PLPISAIS 340
+ G+TAADEE+A+ L ++ +K I+LAVNK ++ + +M EF+SLGF P PIS
Sbjct: 93 REGITAADEEVANLLFRS--NKPIVLAVNKVDNFEMRDLMY--EFYSLGFGDPFPISGTH 148
Query: 341 GTGTGELLDLV---CSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRT 397
G G G+LLD V E + E ED+++ +++GRPNVGKSS+ N+++GE+R
Sbjct: 149 GLGLGDLLDQVFELAPEKDEYEYNEDVIQ-------FSLIGRPNVGKSSLTNSILGEERV 201
Query: 398 IVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRR 457
IVS I+GTTRDAIDT FT +GQ++ +IDTAG+RKR + S TE SV RA +AI R
Sbjct: 202 IVSNIAGTTRDAIDTPFT-RDGQEYVIIDTAGMRKRGKVYES---TERYSVMRAQKAIER 257
Query: 458 SDVVALVIEAMACITEQ 474
S+VV +V++ I EQ
Sbjct: 258 SNVVLVVLDGEEGIIEQ 274
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N ++G R IV + G TRD + E++++DT G+
Sbjct: 177 QFSLIGRPNVGKSSLTNSILGEERVIVSNIAGTTRDAIDTPFTRDGQEYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T +V R A AIE S V++ ++DG+
Sbjct: 234 -RKRGKVYE---------------STERYSVMR--------AQKAIERSNVVLVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLP- 335
G+ D+ +A + K I++ VNK ++ K + EF L ++P+
Sbjct: 270 GIIEQDKRVAGLAHE--AGKAIVIVVNKWDAVEKDDKTMKKMEEKIRQEFLFLDYAPVVF 327
Query: 336 ISAISGTGTGELLDLV 351
+SA++ LL ++
Sbjct: 328 LSALTSKRLQTLLPVI 343
>gi|77405817|ref|ZP_00782901.1| GTP-binding protein, Era/ThdF family [Streptococcus agalactiae
H36B]
gi|77414237|ref|ZP_00790399.1| GTP-binding protein, Era/ThdF family [Streptococcus agalactiae 515]
gi|339300980|ref|ZP_08650105.1| ribosome-associated GTPase EngA [Streptococcus agalactiae ATCC
13813]
gi|417006003|ref|ZP_11944573.1| GTP-binding protein EngA [Streptococcus agalactiae FSL S3-026]
gi|77159726|gb|EAO70875.1| GTP-binding protein, Era/ThdF family [Streptococcus agalactiae 515]
gi|77175604|gb|EAO78389.1| GTP-binding protein, Era/ThdF family [Streptococcus agalactiae
H36B]
gi|319745628|gb|EFV97929.1| ribosome-associated GTPase EngA [Streptococcus agalactiae ATCC
13813]
gi|341576184|gb|EGS26595.1| GTP-binding protein EngA [Streptococcus agalactiae FSL S3-026]
Length = 436
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/316 (43%), Positives = 187/316 (59%), Gaps = 48/316 (15%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+ E+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQADIAMTEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L K +K +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSRILYKT--NKPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPLSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAI---AIVGRPNVGKSSILNALVGEDRT 397
G GTG++LD + L VEEEN P I +++GRPNVGKSS++NA++GEDR
Sbjct: 149 GIGTGDILDAIVENLP--------VEEENENPDIIRFSLIGRPNVGKSSLINAILGEDRV 200
Query: 398 IVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRR 457
I SP++GTTRDAIDT F +GQ++ +IDTAG+RK + + TE SV R+ RAI R
Sbjct: 201 IASPVAGTTRDAIDTNFVDSQGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDR 257
Query: 458 SDVVALVIEAMACITE 473
SDVV +VI A I E
Sbjct: 258 SDVVLMVINAEEGIRE 273
>gi|339635170|ref|YP_004726811.1| GTP-binding protein Der [Weissella koreensis KACC 15510]
gi|420161166|ref|ZP_14667937.1| GTP-binding protein EngA [Weissella koreensis KCTC 3621]
gi|338854966|gb|AEJ24132.1| GTP-binding protein Der [Weissella koreensis KACC 15510]
gi|394745916|gb|EJF34734.1| GTP-binding protein EngA [Weissella koreensis KCTC 3621]
Length = 436
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 186/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y R+ W HEF L+DTGG
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYTRAEWLTHEFRLIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I M P S I++QA A++E+ VI+F+V G+
Sbjct: 61 -----------------IEMSDEPFM----------SEIKQQAEIAMDEADVIVFMVSGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL ADE++A L K +K ++LAVNK ++ ++ +F++LGF P PIS GT
Sbjct: 94 EGLAEADEQVAKMLYKT--NKPVVLAVNKVDNFEMR-SEIFDFYALGFGEPFPISGSHGT 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + S+ G D + + +GRPNVGKSS++NAL+GE+R IVS I
Sbjct: 151 GLGDLLDEIISKFPTDAGVPD-----DDTIRFSFIGRPNVGKSSLVNALLGEERVIVSDI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT+F G +F ++DTAGIRKR + + TE SV RA RAI S+VV
Sbjct: 206 AGTTRDAIDTKFVTDSGDQFTMVDTAGIRKRGKVYEN---TEKYSVMRAMRAIDDSNVVL 262
Query: 463 LVIEAMACITEQ 474
+V+ A I +Q
Sbjct: 263 MVLNAEEGIRDQ 274
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 37/212 (17%)
Query: 154 TIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HE 212
T VP+ R + +GRPNVGKS+L N L+G R IV D G TRD + + +
Sbjct: 165 TDAGVPDDDTIRFSFIGRPNVGKSSLVNALLGEERVIVSDIAGTTRDAIDTKFVTDSGDQ 224
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F +VDT G+ K N T + +V R A AI++
Sbjct: 225 FTMVDTAGIRKRGKVYEN-------------------TEKYSVMR--------AMRAIDD 257
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL--- 329
S V++ +++ + G+ D+ +A + + + +I+ VNK ++ K + EF L
Sbjct: 258 SNVVLMVLNAEEGIRDQDKHVAGYAHE--AGRAVIIVVNKWDTLEKDNHTMHEFEELIRA 315
Query: 330 GFSPL---PISAISGTGTGELLDLVCSELKKV 358
F L PI +S T + LD + +KKV
Sbjct: 316 EFQYLAYAPIVFVSAK-TKQRLDKLPEMIKKV 346
>gi|228907236|ref|ZP_04071096.1| GTP-binding protein engA [Bacillus thuringiensis IBL 200]
gi|228852376|gb|EEM97170.1| GTP-binding protein engA [Bacillus thuringiensis IBL 200]
Length = 436
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 193/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D PG+TRDR+Y W HEF ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGITRDRIYSAGEWLNHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PFLTQ----------IRQQAEVAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ K I+LAVNK ++P + +F+SLGF P PIS G
Sbjct: 94 DGVTAADEEVAKILYRS--KKPIVLAVNKVDNPEMR-SDIYDFYSLGFGEPFPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + K+E E+ ++E +++GRPNVGKSS++NAL+G++R IVS I
Sbjct: 151 GLGDLLDEAANHFPKIE--EEAYDDET--IRFSLIGRPNVGKSSLVNALLGQERVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT ++ + Q + +IDTAG+RK+ + S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDTPYS-KDDQDYVIIDTAGMRKKGKVYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N L+G R IV + G TRD + + +++++DT G+
Sbjct: 177 RFSLIGRPNVGKSSLVNALLGQERVIVSNIAGTTRDAVDTPYSKDDQDYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++DG+
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D++IA + + + +I+ VNK ++ +K
Sbjct: 270 GIIEQDKKIAGYAHDS--GRAVIIVVNKWDAVKK 301
>gi|149183701|ref|ZP_01862112.1| GTP-binding protein EngA [Bacillus sp. SG-1]
gi|148848583|gb|EDL62822.1| GTP-binding protein EngA [Bacillus sp. SG-1]
Length = 436
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 143/315 (45%), Positives = 194/315 (61%), Gaps = 48/315 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W H+F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERISIVEDVPGVTRDRIYSSADWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I +QA AI+E+ VI+FL +G+
Sbjct: 62 ----------------EIGDE--PFLEQ----------IRQQAEIAIDEADVIVFLTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADE +A L ++ K ++LAVNK ++P + V +F+SLGF P PIS G
Sbjct: 94 EGVTAADEIVAKILYRS--KKPVVLAVNKIDNPEMREL-VYDFYSLGFGEPFPISGAHGI 150
Query: 343 GTGELLDLVCSELKKVEG---TEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G G++LD V KK G ED+++ +++GRPNVGKSS++NAL+GEDR IV
Sbjct: 151 GLGDMLDEVAKNFKKDSGEGYAEDVIK-------FSLIGRPNVGKSSLVNALLGEDRVIV 203
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S ++GTTRDAID++ +GQ++ +IDTAG+RK+ + S TE SV RA RAI RSD
Sbjct: 204 SNVAGTTRDAIDSKLK-VDGQEYVIIDTAGMRKKGKVYES---TEKYSVLRALRAIERSD 259
Query: 460 VVALVIEAMACITEQ 474
VV +VI+ I EQ
Sbjct: 260 VVLVVIDGEEGIIEQ 274
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N L+G +R IV + G TRD + + E++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSLVNALLGEDRVIVSNVAGTTRDAIDSKLKVDGQEYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++DG+
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVVIDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE-----FWSLGFSPL 334
G+ D++IA + + + +I+ VNK E K + + E F L ++P+
Sbjct: 270 GIIEQDKKIAGYAHE--AGRGVIIVVNKWDAVEKDEKTMKKFEENIREHFLFLDYAPI 325
>gi|452976683|gb|EME76498.1| GTP-binding protein Der [Bacillus sonorensis L12]
Length = 436
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 191/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W H+F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNHDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I QA A++E+ VIIF+ +G+
Sbjct: 62 ----------------EIGDE--PFL----------AQIRHQAEIAMDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L + K ++LAVNK ++P + +F+SLGF P PIS G
Sbjct: 94 EGVTAADEEVAKILYRT--KKPVVLAVNKVDNPEMR-ANIYDFYSLGFGEPYPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K + T+ ++ + ++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GLGDLLDAVSEHFKNIPDTK----YDDEVVQFCLIGRPNVGKSSLVNAMLGEERVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT+FT + ++F ++DTAG+RK+ + S TE SV RA +AI RS+VVA
Sbjct: 207 AGTTRDAVDTKFTYNQ-REFVIVDTAGMRKKGKVYES---TEKYSVLRALKAIDRSEVVA 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ ++GRPNVGKS+L N ++G R IV + G TRD + + + + EF++VDT G+
Sbjct: 177 QFCLIGRPNVGKSSLVNAMLGEERVIVSNIAGTTRDAVDTKFTYNQREFVIVDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AI+ S V+ ++DG+
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIDRSEVVAVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + K +++ VNK ++ K + EF
Sbjct: 270 GIIEQDKRIAGYAHE--AGKAVVIVVNKWDAVEKDERTMKEF 309
>gi|402815228|ref|ZP_10864821.1| GTPase Der [Paenibacillus alvei DSM 29]
gi|402507599|gb|EJW18121.1| GTPase Der [Paenibacillus alvei DSM 29]
Length = 440
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 191/314 (60%), Gaps = 45/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR++G AIV D+PGVTRDR+YG W F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIIGDRLAIVEDKPGVTRDRIYGTGEWNGKPFNIIDTGGIEV 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + M I QA AIEE+ VI+F+ + +
Sbjct: 64 YGEDE-----------------------------MLRSIRVQAELAIEEADVIVFMCEAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+G+T ADEE+A L ++ K I+LAVNK ++ + + + EF+SLGF P+PIS GT
Sbjct: 95 SGVTQADEEVAQMLFRS--GKPIVLAVNKVDNMSR-MDDIYEFYSLGFGDPVPISGSHGT 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEE--NRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G+LLD V + L DL +EE + +A++GRPNVGKSS++NA++GE+R IVS
Sbjct: 152 GIGDLLDEVVNNLP------DLSDEEYGEDVIKVALIGRPNVGKSSLVNAILGEERVIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
++GTTRDAIDT F + Q+F LIDTAG+RKR + TTE SV R+ +AI R+DV
Sbjct: 206 DVAGTTRDAIDTPFE-KDDQRFVLIDTAGMRKRGKVY---ETTEKYSVMRSMKAIERADV 261
Query: 461 VALVIEAMACITEQ 474
V +VI I EQ
Sbjct: 262 VLVVINGEEGIIEQ 275
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 372 PAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGP-EGQKFRLIDTAGI 430
P +AIVGRPNVGKS+I N ++G+ IV G TRD I TG G+ F +IDT GI
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIIGDRLAIVEDKPGVTRDRIYG--TGEWNGKPFNIIDTGGI 61
Query: 431 RKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQAD 476
+ ++ V +A AI +DV+ + EA + +T QAD
Sbjct: 62 E----VYGEDEMLRSIRV-QAELAIEEADVIVFMCEAKSGVT-QAD 101
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA++GRPNVGKS+L N ++G R IV D G TRD + + F+L+DT G+
Sbjct: 178 KVALIGRPNVGKSSLVNAILGEERVIVSDVAGTTRDAIDTPFEKDDQRFVLIDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R + AIE + V++ +++G+
Sbjct: 235 -RKRGKVYE---------------TTEKYSVMR--------SMKAIERADVVLVVINGEE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + K ++ VNK + K + +F
Sbjct: 271 GIIEQDKHIAGYAHE--AGKAVLFVVNKWDVVDKDDKTMHQF 310
>gi|365162301|ref|ZP_09358431.1| GTPase Der [Bacillus sp. 7_6_55CFAA_CT2]
gi|363618614|gb|EHL69958.1| GTPase Der [Bacillus sp. 7_6_55CFAA_CT2]
Length = 309
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 194/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSAGEWLNHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PFLTQ----------IRQQAEVAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ +K ++LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 DGVTAADEEVAKILYRS--NKPVVLAVNKVDNPEMR-SDIYDFYALGFGEPFPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD K+E ED +E+ +++GRPNVGKSS++NAL+G++R IVS +
Sbjct: 151 GLGDLLDEAAQHFPKIE--EDGYDEDT--IRFSLIGRPNVGKSSLVNALLGQERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT ++ +G+ + +IDTAG+RK+ + S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDTPYS-KDGKDYVIIDTAGMRKKGKVYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N L+G R IV + G TRD + +++++DT G+
Sbjct: 177 RFSLIGRPNVGKSSLVNALLGQERVIVSNVAGTTRDAVDTPYSKDGKDYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++DG+
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D++IA + + + +++ VNK ++ K
Sbjct: 270 GIIEQDKKIAGYAHDS--GRAVVIVVNKWDAVEK 301
>gi|25011707|ref|NP_736102.1| GTP-binding protein EngA [Streptococcus agalactiae NEM316]
gi|41017045|sp|Q8E3T9.1|DER_STRA3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|24413247|emb|CAD47326.1| Unknown [Streptococcus agalactiae NEM316]
Length = 436
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/316 (43%), Positives = 187/316 (59%), Gaps = 48/316 (15%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+ E+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQADIAMTEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L K +K +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSLILYKT--NKPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPLSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAI---AIVGRPNVGKSSILNALVGEDRT 397
G GTG++LD + L VEEEN P I +++GRPNVGKSS++NA++GEDR
Sbjct: 149 GIGTGDILDAIVENLP--------VEEENENPDIIRFSLIGRPNVGKSSLINAILGEDRV 200
Query: 398 IVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRR 457
I SP++GTTRDAIDT F +GQ++ +IDTAG+RK + + TE SV R+ RAI R
Sbjct: 201 IASPVAGTTRDAIDTNFVDSQGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDR 257
Query: 458 SDVVALVIEAMACITE 473
SDVV +VI A I E
Sbjct: 258 SDVVLMVINAEEGIRE 273
>gi|218896533|ref|YP_002444944.1| GTP-binding protein EngA [Bacillus cereus G9842]
gi|228900184|ref|ZP_04064416.1| GTP-binding protein engA [Bacillus thuringiensis IBL 4222]
gi|228938715|ref|ZP_04101319.1| GTP-binding protein engA [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228964578|ref|ZP_04125687.1| GTP-binding protein engA [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228971597|ref|ZP_04132220.1| GTP-binding protein engA [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228978207|ref|ZP_04138584.1| GTP-binding protein engA [Bacillus thuringiensis Bt407]
gi|384185512|ref|YP_005571408.1| GTP-binding protein EngA [Bacillus thuringiensis serovar chinensis
CT-43]
gi|402561405|ref|YP_006604129.1| GTP-binding protein Der [Bacillus thuringiensis HD-771]
gi|410673805|ref|YP_006926176.1| GTPase Der [Bacillus thuringiensis Bt407]
gi|423361562|ref|ZP_17339064.1| GTPase Der [Bacillus cereus VD022]
gi|423382998|ref|ZP_17360254.1| GTPase Der [Bacillus cereus BAG1X1-2]
gi|423530542|ref|ZP_17506987.1| GTPase Der [Bacillus cereus HuB1-1]
gi|423564101|ref|ZP_17540377.1| GTPase Der [Bacillus cereus MSX-A1]
gi|434374542|ref|YP_006609186.1| GTP-binding protein Der [Bacillus thuringiensis HD-789]
gi|452197829|ref|YP_007477910.1| GTP-binding protein EngA [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|226741129|sp|B7IP82.1|DER_BACC2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|218545843|gb|ACK98237.1| ribosome-associated GTPase EngA [Bacillus cereus G9842]
gi|228781224|gb|EEM29425.1| GTP-binding protein engA [Bacillus thuringiensis Bt407]
gi|228788120|gb|EEM36076.1| GTP-binding protein engA [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228795112|gb|EEM42609.1| GTP-binding protein engA [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228820956|gb|EEM66977.1| GTP-binding protein engA [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228859454|gb|EEN03882.1| GTP-binding protein engA [Bacillus thuringiensis IBL 4222]
gi|326939221|gb|AEA15117.1| GTP-binding protein EngA [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401079373|gb|EJP87671.1| GTPase Der [Bacillus cereus VD022]
gi|401197592|gb|EJR04521.1| GTPase Der [Bacillus cereus MSX-A1]
gi|401643858|gb|EJS61552.1| GTPase Der [Bacillus cereus BAG1X1-2]
gi|401790057|gb|AFQ16096.1| GTP-binding protein Der [Bacillus thuringiensis HD-771]
gi|401873099|gb|AFQ25266.1| GTP-binding protein Der [Bacillus thuringiensis HD-789]
gi|402447057|gb|EJV78915.1| GTPase Der [Bacillus cereus HuB1-1]
gi|409172934|gb|AFV17239.1| GTPase Der [Bacillus thuringiensis Bt407]
gi|452103222|gb|AGG00162.1| GTP-binding protein EngA [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 436
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 193/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D PG+TRDR+Y W HEF ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGITRDRIYSAGEWLNHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PFLTQ----------IRQQAEVAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ K I+LAVNK ++P + +F+SLGF P PIS G
Sbjct: 94 DGVTAADEEVAKILYRS--KKPIVLAVNKVDNPEMR-SDIYDFYSLGFGEPFPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + K+E E+ ++E +++GRPNVGKSS++NAL+G++R IVS I
Sbjct: 151 GLGDLLDEAANHFPKIE--EEAYDDET--IRFSLIGRPNVGKSSLVNALLGQERVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT ++ + Q + +IDTAG+RK+ + S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDTPYS-KDDQDYVIIDTAGMRKKGKVYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N L+G R IV + G TRD + + +++++DT G+
Sbjct: 177 RFSLIGRPNVGKSSLVNALLGQERVIVSNIAGTTRDAVDTPYSKDDQDYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++DG+
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSE------FWSLGFSPLP- 335
G+ D++IA + + + +I+ VNK ++ +K M+ E F L ++P+
Sbjct: 270 GIIEQDKKIAGYAHDS--GRAVIIVVNKWDAVKKDEKTMKAFEENIRAHFQFLDYAPIVF 327
Query: 336 ISAISGTGTGELLDLV 351
+SA + T LL ++
Sbjct: 328 LSAKTKKRTQTLLPVI 343
>gi|386723501|ref|YP_006189827.1| GTP-binding protein Der [Paenibacillus mucilaginosus K02]
gi|384090626|gb|AFH62062.1| GTP-binding protein Der [Paenibacillus mucilaginosus K02]
Length = 440
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 193/314 (61%), Gaps = 45/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR++G AIV D+PGVTRDR+YGR W + EF ++DTGG
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIIGDKLAIVEDKPGVTRDRLYGRGEWLDQEFSIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I +EG R V QA AIEE+ VIIF+VD +
Sbjct: 61 -----------------IEIEGEDHILRSVRV---------QAELAIEEADVIIFMVDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
AG+T AD E+A L ++ K +++AVNK ++ ++ + EF+S+GF + IS GT
Sbjct: 95 AGVTPADSEVAQILFRS--QKPVVVAVNKVDNLQRA-DDIYEFYSMGFGEIVGISGAHGT 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEE--NRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G+LL+ V D V+EE + +A++GRPNVGKSS++NA++GE+R IVS
Sbjct: 152 GIGDLLEEVVKHFP------DTVDEEYGEDVIRVALIGRPNVGKSSLVNAILGEERVIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
++GTTRDAIDT F +GQK+ +IDTAG+RKR + + TE SV RA +AI R+DV
Sbjct: 206 DMAGTTRDAIDTPFE-KDGQKYVIIDTAGMRKRGKVYEN---TEKYSVMRAMKAIERADV 261
Query: 461 VALVIEAMACITEQ 474
V +VI+ I EQ
Sbjct: 262 VLVVIDGEVGIIEQ 275
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G R IV D G TRD + +++++DT G+
Sbjct: 178 RVALIGRPNVGKSSLVNAILGEERVIVSDMAGTTRDAIDTPFEKDGQKYVIIDTAGMRKR 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + +V R A AIE + V++ ++DG+
Sbjct: 238 GKVYEN-------------------TEKYSVMR--------AMKAIERADVVLVVIDGEV 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE-----FWSLGFSPL 334
G+ D+ +A + + K + VNK E K + Q + F + ++P+
Sbjct: 271 GIIEQDKHVAGYAHE--AGKAAVFVVNKWDIVEKDEKTMHQFEQKIRDHFLFMTYAPV 326
>gi|354582633|ref|ZP_09001534.1| ribosome-associated GTPase EngA [Paenibacillus lactis 154]
gi|353198925|gb|EHB64391.1| ribosome-associated GTPase EngA [Paenibacillus lactis 154]
Length = 440
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 191/312 (61%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNRL+G AIV D+PG+TRDR+YG + W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRLIGDRLAIVEDKPGITRDRIYGSAEWNGKAFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I D I +I M QA AIEE+ VIIF+ D +
Sbjct: 62 ------EIDGDDMILKSIRM---------------------QAELAIEEADVIIFMCDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T +DEE+A L ++ K +ILAVNK ++ ++ + EF+SLGF P+ IS GT
Sbjct: 95 TGVTQSDEEVAQILFRS--GKPVILAVNKVDNLKRA-EDIYEFYSLGFGDPVGISGSHGT 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD+V L + + + + +A++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 152 GIGDLLDVVVENLPDLADD----DYDEDVIRVALIGRPNVGKSSLVNAILGEERVIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F +GQ++ LIDTAG+RKR + TTE SV RA RAI R+DVV
Sbjct: 208 AGTTRDAIDTPFE-KDGQRYVLIDTAGMRKRGKVY---ETTEKYSVMRAMRAIERADVVL 263
Query: 463 LVIEAMACITEQ 474
++I I EQ
Sbjct: 264 VLINGEEGIIEQ 275
>gi|379720895|ref|YP_005313026.1| protein EngA [Paenibacillus mucilaginosus 3016]
gi|378569567|gb|AFC29877.1| EngA [Paenibacillus mucilaginosus 3016]
Length = 440
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 193/314 (61%), Gaps = 45/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR++G AIV D+PGVTRDR+YGR W + EF ++DTGG
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIIGDKLAIVEDKPGVTRDRLYGRGEWLDQEFSIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I +EG R V QA AIEE+ VIIF+VD +
Sbjct: 61 -----------------IEIEGEDHILRSVRV---------QAELAIEEADVIIFMVDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
AG+T AD E+A L ++ K +++AVNK ++ ++ + EF+S+GF + IS GT
Sbjct: 95 AGVTPADSEVAQILFRS--QKPVVVAVNKVDNLQRA-DDIYEFYSMGFGEIVGISGAHGT 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEE--NRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G+LL+ V D V+EE + +A++GRPNVGKSS++NA++GE+R IVS
Sbjct: 152 GIGDLLEEVVKHFP------DTVDEEYGEDVIRVALIGRPNVGKSSLVNAILGEERVIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
++GTTRDAIDT F +GQK+ +IDTAG+RKR + + TE SV RA +AI R+DV
Sbjct: 206 DMAGTTRDAIDTPFE-KDGQKYVIIDTAGMRKRGKVYEN---TEKYSVMRAMKAIERADV 261
Query: 461 VALVIEAMACITEQ 474
V +VI+ I EQ
Sbjct: 262 VLVVIDGEVGIIEQ 275
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G R IV D G TRD + +++++DT G+
Sbjct: 178 RVALIGRPNVGKSSLVNAILGEERVIVSDMAGTTRDAIDTPFEKDGQKYVIIDTAGMRKR 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + +V R A AIE + V++ ++DG+
Sbjct: 238 GKVYEN-------------------TEKYSVMR--------AMKAIERADVVLVVIDGEV 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE-----FWSLGFSPL 334
G+ D+ +A + + K + VNK E K + Q + F + ++P+
Sbjct: 271 GIIEQDKHVAGYAHE--AGKAAVFVVNKWDVVEKDEKTMHQFEQKIRDHFLFMTYAPV 326
>gi|345021419|ref|ZP_08785032.1| GTP-binding protein Der [Ornithinibacillus scapharcae TW25]
Length = 436
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/310 (46%), Positives = 189/310 (60%), Gaps = 42/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNRLVG +IV D PGVTRDR+Y ++ W F L+DTGG+
Sbjct: 6 VAIVGRPNVGKSTIFNRLVGERISIVEDIPGVTRDRIYSQAEWLNTNFNLIDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
IG E + + R+ QA AI+E+ VIIF+V+ + G
Sbjct: 62 --------------EIGDEPLLIQMRQ------------QAEIAIDEADVIIFIVNAKEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+TAADEE+A L K+ K ++LAVNK ++P ++ E++SLGF P PIS G G
Sbjct: 96 ITAADEEVAKLLYKS--SKPVVLAVNKVDNPEMR-DEIYEYYSLGFGEPFPISGAHGLGL 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V + + E +E+ I +++GRPNVGKSS++NAL+ E+R IVS I G
Sbjct: 153 GDLLDEVVTHFPQFEQES---HDEDTI-YFSLIGRPNVGKSSLVNALLNEERVIVSDIEG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT +GQ + +IDTAG+RKR + S TE SV RA RAI RSDVV ++
Sbjct: 209 TTRDAIDTHLN-KDGQDYVIIDTAGMRKRGKVYES---TEKYSVLRALRAIERSDVVLVL 264
Query: 465 IEAMACITEQ 474
I+A I EQ
Sbjct: 265 IDAETGIREQ 274
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPE--GQKFRLIDT 427
R +AIVGRPNVGKS+I N LVGE +IV I G TRD I ++ E F LIDT
Sbjct: 2 RKAVVAIVGRPNVGKSTIFNRLVGERISIVEDIPGVTRDRI---YSQAEWLNTNFNLIDT 58
Query: 428 AGI 430
GI
Sbjct: 59 GGI 61
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 37/176 (21%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS+L N L+ R IV D G TRD + +++++DT G+ +
Sbjct: 179 SLIGRPNVGKSSLVNALLNEERVIVSDIEGTTRDAIDTHLNKDGQDYVIIDTAGM----R 234
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E +T + +V R A AIE S V++ L+D + G+
Sbjct: 235 KRGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVLIDAETGI 271
Query: 287 TAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE-----FWSLGFSPL 334
D++IA + + I++ VNK E+ K + + E F L ++P+
Sbjct: 272 REQDKKIAGYAHD--AGRSIVIVVNKWDAIETDEKTMKEFEEKIRAHFQFLDYAPI 325
>gi|449930232|ref|ZP_21801963.1| GTP-binding protein EngA [Streptococcus mutans 3SN1]
gi|449163708|gb|EMB66801.1| GTP-binding protein EngA [Streptococcus mutans 3SN1]
Length = 436
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 186/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILAVNK ++P + +F++LG P P+S+ G
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMH-SAIYDFYALGLGDPYPVSSAHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVDNLPT-----EAQEESSDIIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD+V
Sbjct: 205 VAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDIV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|281491251|ref|YP_003353231.1| GTP-binding protein [Lactococcus lactis subsp. lactis KF147]
gi|281374992|gb|ADA64510.1| GTP-binding protein [Lactococcus lactis subsp. lactis KF147]
Length = 436
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 183/312 (58%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F ++DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLTRKFNIIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T I QA A+ E+ VII +VDG
Sbjct: 61 ------------------IELSDEPFMTE----------IRAQAEIAMTEADVIITVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A+ L + DK +IL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADEAVANILYRT--DKPVILVVNKVDNPERR-MEIFDFYSLGLGDPYPVSAVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E + +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVQNLPNEIEEE-----NENVIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDAIDT F E Q+F +IDTAG+RK I + TE SV RA RAI RSD+V
Sbjct: 205 IAGTTRDAIDTHFVDSEDQEFVMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDIV 261
Query: 462 ALVIEAMACITE 473
+VI A I E
Sbjct: 262 LMVINAEEGIRE 273
>gi|418323877|ref|ZP_12935137.1| ribosome-associated GTPase EngA [Staphylococcus pettenkoferi
VCU012]
gi|365229114|gb|EHM70281.1| ribosome-associated GTPase EngA [Staphylococcus pettenkoferi
VCU012]
Length = 436
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYAGGEWLTHEFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL+ +DE +A L K+ K ++LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 EGLSQSDEMVAQMLYKS--KKPVVLAVNKVDNPEMR-NDIYDFYALGFGDPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K E E E+ R+ +I+GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDEVVKHFPK-EEPEPYDEDTIRL---SIIGRPNVGKSSLINAILGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DTE+T +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAVDTEYTY-QGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+V++A I EQ
Sbjct: 263 VVLDAEQGIIEQ 274
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLINAILGEERVIVSNVAGTTRDAVDTEYTYQGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVLDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ +A + + K I++ VNK ++ K
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTVEK 301
>gi|56909884|dbj|BAD64411.1| EngA subfamily GTP-binding protein [Bacillus clausii KSM-K16]
Length = 439
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 194/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG AIV D PGVTRDR+Y + W HEF ++DTGG+
Sbjct: 6 PVVAIVGRPNVGKSTIFNRIVGERVAIVEDLPGVTRDRLYSKGEWLNHEFYVIDTGGI-- 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+G E + + R+ QA AI+E+ VIIF+V+G+
Sbjct: 64 ----------------ELGDEPLLVQMRQ------------QAEIAIDEANVIIFMVNGR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAAD+E+A+ L ++ K ++LAVNK ++P + + EF+SLG P IS G
Sbjct: 96 EGITAADQEVANMLFRS--KKPVVLAVNKVDNPDMREL-LYEFYSLGAGEPYGISGSHGL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + E +D ++ ++ A++GRPNVGKSS++NAL+GE+R IVS I
Sbjct: 153 GIGDLLDEVVRHFPE-ENDDDYADDTIKM---ALIGRPNVGKSSLVNALLGEERVIVSQI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT FT +GQ + +IDTAG+RKR + + TE SV R+ +AI RSDVV
Sbjct: 209 PGTTRDAIDTSFT-RDGQHYVVIDTAGMRKRGKVYEA---TEKYSVLRSLKAIERSDVVL 264
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 265 VVLDGEEGIIEQ 276
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 44/210 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW--GEHEFMLVDTGGVL 222
++A++GRPNVGKS+L N L+G R IV PG TRD + SF G+H ++++DT G+
Sbjct: 179 KMALIGRPNVGKSSLVNALLGEERVIVSQIPGTTRDAI-DTSFTRDGQH-YVVIDTAGM- 235
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + E AT + +V R + AIE S V++ ++DG
Sbjct: 236 ---RKRGKVYE---------------ATEKYSVLR--------SLKAIERSDVVLVVLDG 269
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQV------SEFWSLGFSPL 334
+ G+ D++IA + + + I++ VNK ++ +K MQ SEF L ++P+
Sbjct: 270 EEGIIEQDKKIAGYAHE--AGRAIVIVVNKWDAVKKDDKTMQTFVEDIRSEFQFLSYAPI 327
Query: 335 PISAISGTGTGELLDLVCSELKKVEGTEDL 364
T + L L+ E++KV + L
Sbjct: 328 ---CFLSAKTKQRLHLLLPEVRKVSESHHL 354
>gi|161349991|ref|YP_175372.2| GTP-binding protein EngA [Bacillus clausii KSM-K16]
Length = 437
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 194/312 (62%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG AIV D PGVTRDR+Y + W HEF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVAIVEDLPGVTRDRLYSKGEWLNHEFYVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+G E + + R+ QA AI+E+ VIIF+V+G+
Sbjct: 62 ----------------ELGDEPLLVQMRQ------------QAEIAIDEANVIIFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAAD+E+A+ L ++ K ++LAVNK ++P + + EF+SLG P IS G
Sbjct: 94 EGITAADQEVANMLFRS--KKPVVLAVNKVDNPDMREL-LYEFYSLGAGEPYGISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + E +D ++ ++ A++GRPNVGKSS++NAL+GE+R IVS I
Sbjct: 151 GIGDLLDEVVRHFPE-ENDDDYADDTIKM---ALIGRPNVGKSSLVNALLGEERVIVSQI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT FT +GQ + +IDTAG+RKR + + TE SV R+ +AI RSDVV
Sbjct: 207 PGTTRDAIDTSFT-RDGQHYVVIDTAGMRKRGKVYEA---TEKYSVLRSLKAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 44/210 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW--GEHEFMLVDTGGVL 222
++A++GRPNVGKS+L N L+G R IV PG TRD + SF G+H ++++DT G+
Sbjct: 177 KMALIGRPNVGKSSLVNALLGEERVIVSQIPGTTRDAI-DTSFTRDGQH-YVVIDTAGM- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + E AT + +V R + AIE S V++ ++DG
Sbjct: 234 ---RKRGKVYE---------------ATEKYSVLR--------SLKAIERSDVVLVVLDG 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQV------SEFWSLGFSPL 334
+ G+ D++IA + + + I++ VNK ++ +K MQ SEF L ++P+
Sbjct: 268 EEGIIEQDKKIAGYAHE--AGRAIVIVVNKWDAVKKDDKTMQTFVEDIRSEFQFLSYAPI 325
Query: 335 PISAISGTGTGELLDLVCSELKKVEGTEDL 364
T + L L+ E++KV + L
Sbjct: 326 ---CFLSAKTKQRLHLLLPEVRKVSESHHL 352
>gi|15672737|ref|NP_266911.1| GTP-binding protein EngA [Lactococcus lactis subsp. lactis Il1403]
gi|385830298|ref|YP_005868111.1| GTP-binding protein [Lactococcus lactis subsp. lactis CV56]
gi|418039188|ref|ZP_12677494.1| hypothetical protein LLCRE1631_02301 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|26006736|sp|Q9CHH6.1|DER_LACLA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|12723672|gb|AAK04853.1|AE006309_2 GTP-binding protein [Lactococcus lactis subsp. lactis Il1403]
gi|326406306|gb|ADZ63377.1| GTP-binding protein [Lactococcus lactis subsp. lactis CV56]
gi|354692304|gb|EHE92134.1| hypothetical protein LLCRE1631_02301 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|374672795|dbj|BAL50686.1| GTP-binding protein [Lactococcus lactis subsp. lactis IO-1]
Length = 436
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 183/312 (58%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F ++DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLTRKFNIIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T I QA A+ E+ VII +VDG
Sbjct: 61 ------------------IELSDEPFMTE----------IRAQAEIAMTEADVIIAVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A+ L + DK +IL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADEAVANILYRT--DKPVILVVNKVDNPERR-MEIFDFYSLGLGDPYPVSAVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E + +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVQNLPNEIEEE-----NENVIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDAIDT F E Q+F +IDTAG+RK I + TE SV RA RAI RSD+V
Sbjct: 205 IAGTTRDAIDTHFVDSEDQEFVMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDIV 261
Query: 462 ALVIEAMACITE 473
+VI A I E
Sbjct: 262 LMVINAEEGIRE 273
>gi|418411892|ref|ZP_12985158.1| GTPase Der [Staphylococcus epidermidis BVS058A4]
gi|410891475|gb|EKS39272.1| GTPase Der [Staphylococcus epidermidis BVS058A4]
Length = 436
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVG+PNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AIEE+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIEEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQMLYKS--KKPVVLAVNKVDNLEMR-NDIYDFYSLGFGDPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K +ED +E+ ++I+GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVVENFNK--ESEDPYDEDT--IRLSIIGRPNVGKSSLVNAILGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ I S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKIYES---TEKYSVLRALKAIERSEVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + I E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKIYE---------------STEKYSVLR--------ALKAIERSEVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K I++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTVEKDSKTMKKF 309
>gi|425737298|ref|ZP_18855571.1| GTP-binding protein Der [Staphylococcus massiliensis S46]
gi|425482646|gb|EKU49802.1| GTP-binding protein Der [Staphylococcus massiliensis S46]
Length = 436
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 193/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W EF ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTDEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E + A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EISDAPFQTQIRAQAEIAIDEADVIIFMVNIR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
GLT DE IA L ++ +K ++LAVNK ++P K ++ +F++LGF P PIS G
Sbjct: 94 EGLTQDDEMIAQMLYRS--NKPVVLAVNKVDNP-KMRAEIYDFYALGFGEPFPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + K+ E ED +E+ ++I+GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDEVKNHFKREE--EDPYDEDT--IKLSIIGRPNVGKSSLVNAILGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE+T + Q + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYTF-DDQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+++I+GRPNVGKS+L N ++G R IV + G TRD + + + +++L+DT G+
Sbjct: 177 KLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAIDTEYTFDDQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ +A + + K I++ VNK ++ K
Sbjct: 270 GIIEQDKRVAGYAHEQ--GKAIVIVVNKWDTVEK 301
>gi|387785437|ref|YP_006250533.1| phosphoglycerate dehydrogenase [Streptococcus mutans LJ23]
gi|450089352|ref|ZP_21855169.1| GTP-binding protein EngA [Streptococcus mutans NV1996]
gi|379131838|dbj|BAL68590.1| phosphoglycerate dehydrogenase [Streptococcus mutans LJ23]
gi|449215690|gb|EMC15870.1| GTP-binding protein EngA [Streptococcus mutans NV1996]
Length = 436
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 186/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILAVNK ++P + +F++LG P P+S+ G
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMR-SAIYDFYALGLGDPYPVSSAHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVDNLPA-----EAQEESSDIIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD+V
Sbjct: 205 VAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDIV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|339624197|ref|ZP_08659986.1| GTP-binding protein Der [Fructobacillus fructosus KCTC 3544]
Length = 436
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 184/312 (58%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNR+VG AIV D+PGVTRDR+Y R+ W ++F ++DTGG
Sbjct: 4 PVVAVVGRPNVGKSTLFNRIVGERMAIVEDKPGVTRDRLYARAEWLNYDFRVIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ M P T I Q AI+E+ VI+ +V G+
Sbjct: 61 -----------------LEMGNAPFLTE----------IRGQVEVAIDEADVIVMVVSGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTA D+ +A+ L DK ++LAVNK ++P + +F+SLG P P+S G
Sbjct: 94 EGLTADDQAVANLLYG--ADKPVVLAVNKVDNPEMR-SDIYDFYSLGLGDPYPVSGSHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V +D +E R +I+GRPNVGKSSI+NA++GEDR IVS I
Sbjct: 151 GLGDVLDQVVKNFPDEAAVQD--DEAVRF---SIIGRPNVGKSSIVNAILGEDRMIVSNI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F PEG +F ++DTAGIRKR + + TE SV RA +AI S+VV
Sbjct: 206 EGTTRDAIDTRFMTPEGDEFVMVDTAGIRKRGKVYEN---TEKYSVMRAMKAIDDSEVVL 262
Query: 463 LVIEAMACITEQ 474
+V++A I +Q
Sbjct: 263 MVLDAETGIRDQ 274
>gi|300173424|ref|YP_003772590.1| GTP-binding protein EngA [Leuconostoc gasicomitatum LMG 18811]
gi|299887803|emb|CBL91771.1| GTP-binding protein EngA [Leuconostoc gasicomitatum LMG 18811]
Length = 437
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 184/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G AIV D+PGVTRDR+Y + W +EF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRMAGERIAIVEDQPGVTRDRLYAPAEWLNYEFRMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I Q AI+E+ VI+ + G+
Sbjct: 62 ----------------------------ELGDAPFLAEIRAQVELAIDEADVIVMITSGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ADE +A L K DK ++LA+NK ++P + +F+SLG P P+S G
Sbjct: 94 EGVTSADEVVAKMLYKT--DKPVVLAINKVDNPEMR-QDIYDFYSLGLGDPFPVSGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V E E E+E I +I+GRPNVGKSSI+NA++GEDR IVS I
Sbjct: 151 GLGDLLDEVVKHFPD-EAAEQ--EDEGAI-KFSIIGRPNVGKSSIVNAMLGEDRVIVSSI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID+ F PEG +F ++DTAG+RKR + + TE SV RA +AI S+V+
Sbjct: 207 EGTTRDAIDSRFVTPEGDEFIMVDTAGMRKRGKVYEN---TEKYSVMRALKAIDNSNVIL 263
Query: 463 LVIEAMACITEQ 474
+VI+A A I EQ
Sbjct: 264 MVIDAEAGIREQ 275
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 37/205 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +I+GRPNVGKS++ N ++G +R IV G TRD + R E EF++VDT G+
Sbjct: 177 KFSIIGRPNVGKSSIVNAMLGEDRVIVSSIEGTTRDAIDSRFVTPEGDEFIMVDTAGMRK 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S VI+ ++D +
Sbjct: 237 RGKVYEN-------------------TEKYSVMR--------ALKAIDNSNVILMVIDAE 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL------PIS 337
AG+ D+ +A + + + +I+ VNK ++ K + EF L S PI+
Sbjct: 270 AGIREQDKHVAGFAHE--AGRAMIIVVNKWDAVEKDDHTMKEFEDLIRSEFKFLDYAPIT 327
Query: 338 AISGTGTGELLDLVCSELKKVEGTE 362
+S TG+ LD + +K V+
Sbjct: 328 FVSAK-TGQRLDRLPQLVKDVDNNH 351
>gi|262282140|ref|ZP_06059909.1| GTP-binding protein engA [Streptococcus sp. 2_1_36FAA]
gi|262262594|gb|EEY81291.1| GTP-binding protein engA [Streptococcus sp. 2_1_36FAA]
Length = 436
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 186/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV + GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVENVEGVTRDRIYATADWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ I+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADAIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E V E + +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVENLPNEE-----VAENPDMIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSDVV
Sbjct: 205 VAGTTRDAIDTVFTDSEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|397650457|ref|YP_006490984.1| GTP-binding protein Der [Streptococcus mutans GS-5]
gi|449995016|ref|ZP_21822870.1| GTP-binding protein EngA [Streptococcus mutans A9]
gi|392604026|gb|AFM82190.1| GTP-binding protein Der [Streptococcus mutans GS-5]
gi|449184791|gb|EMB86710.1| GTP-binding protein EngA [Streptococcus mutans A9]
Length = 436
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/314 (43%), Positives = 187/314 (59%), Gaps = 46/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAIVDNLPA-----EAQEESSDIIKFSLIGRPNVGKSSLINAILGEDRVIA 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SP++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD
Sbjct: 203 SPVAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSD 259
Query: 460 VVALVIEAMACITE 473
+V +V+ A I E
Sbjct: 260 IVLMVLNAEEGIRE 273
>gi|450133215|ref|ZP_21870495.1| GTP-binding protein EngA [Streptococcus mutans NLML8]
gi|449151645|gb|EMB55372.1| GTP-binding protein EngA [Streptococcus mutans NLML8]
Length = 436
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/314 (43%), Positives = 187/314 (59%), Gaps = 46/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAIVDNLPA-----EAQEESSDIIKFSLIGRPNVGKSSLINAILGEDRVIA 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SP++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD
Sbjct: 203 SPVAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSD 259
Query: 460 VVALVIEAMACITE 473
+V +V+ A I E
Sbjct: 260 IVLMVLNAEEGIRE 273
>gi|290579757|ref|YP_003484149.1| phosphoglycerate dehydrogenase [Streptococcus mutans NN2025]
gi|449970071|ref|ZP_21813608.1| GTP-binding protein EngA [Streptococcus mutans 2VS1]
gi|450028642|ref|ZP_21832289.1| GTP-binding protein EngA [Streptococcus mutans G123]
gi|450036755|ref|ZP_21835602.1| GTP-binding protein EngA [Streptococcus mutans M21]
gi|450058283|ref|ZP_21843033.1| GTP-binding protein EngA [Streptococcus mutans NLML4]
gi|450071040|ref|ZP_21847936.1| GTP-binding protein EngA [Streptococcus mutans M2A]
gi|450093658|ref|ZP_21856687.1| GTP-binding protein EngA [Streptococcus mutans W6]
gi|450111133|ref|ZP_21862520.1| GTP-binding protein EngA [Streptococcus mutans SM6]
gi|450148403|ref|ZP_21875589.1| GTP-binding protein EngA [Streptococcus mutans 14D]
gi|450163737|ref|ZP_21880926.1| GTP-binding protein EngA [Streptococcus mutans B]
gi|254996656|dbj|BAH87257.1| phosphoglycerate dehydrogenase [Streptococcus mutans NN2025]
gi|449173688|gb|EMB76241.1| GTP-binding protein EngA [Streptococcus mutans 2VS1]
gi|449193303|gb|EMB94690.1| GTP-binding protein EngA [Streptococcus mutans M21]
gi|449195367|gb|EMB96691.1| GTP-binding protein EngA [Streptococcus mutans G123]
gi|449204069|gb|EMC04888.1| GTP-binding protein EngA [Streptococcus mutans NLML4]
gi|449212886|gb|EMC13235.1| GTP-binding protein EngA [Streptococcus mutans M2A]
gi|449217139|gb|EMC17213.1| GTP-binding protein EngA [Streptococcus mutans W6]
gi|449224161|gb|EMC23811.1| GTP-binding protein EngA [Streptococcus mutans SM6]
gi|449235865|gb|EMC34808.1| GTP-binding protein EngA [Streptococcus mutans 14D]
gi|449242597|gb|EMC41166.1| GTP-binding protein EngA [Streptococcus mutans B]
Length = 436
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/314 (43%), Positives = 187/314 (59%), Gaps = 46/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAIVDNLPT-----EAQEESSDIIKFSLIGRPNVGKSSLINAILGEDRVIA 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SP++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD
Sbjct: 203 SPVAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSD 259
Query: 460 VVALVIEAMACITE 473
+V +V+ A I E
Sbjct: 260 IVLMVLNAEEGIRE 273
>gi|189502515|ref|YP_001958232.1| GTP-binding protein EngA [Candidatus Amoebophilus asiaticus 5a2]
gi|238692314|sp|B3ETF1.1|DER_AMOA5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|189497956|gb|ACE06503.1| hypothetical protein Aasi_1169 [Candidatus Amoebophilus asiaticus
5a2]
Length = 433
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 139/303 (45%), Positives = 182/303 (60%), Gaps = 43/303 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRLV +AI+ E G TRDR YG + W F +VDTGG + S
Sbjct: 5 VAIVGRPNVGKSTLFNRLVEERKAIMASESGTTRDRHYGYATWNGKNFTVVDTGGYVQGS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+I E I QA AIEE+ V++F+VD Q G
Sbjct: 65 S---DIFE--------------------------KSICEQAKIAIEEASVVLFMVDCQVG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
+TA D+E+A LR DK ++L NK ++ +M EF +LG +P PISA SGTGT
Sbjct: 96 ITAMDKEVAHILRA--ADKPVLLVANKADNVDTALM-AHEFHALGLGNPYPISAASGTGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V +D +E+E IP IAI+GRPNVGKSS+LNAL+GE+R+IV+PI+G
Sbjct: 153 GDLLDQVTVY------CQDTIEQETDIPKIAILGRPNVGKSSLLNALLGEERSIVTPIAG 206
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT + G+ F L DTAGIRK++ + E S RA +A++ +DV ++
Sbjct: 207 TTRDAIDTTY-NLYGKNFILTDTAGIRKKSKVKED---IEFYSTLRALKALQDADVCIIM 262
Query: 465 IEA 467
I+A
Sbjct: 263 IDA 265
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 41/162 (25%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RMYGRSFWGEHEFMLV 216
+P++AI+GRPNVGKS+L N L+G R+IV G TRD +YG++ F+L
Sbjct: 173 IPKIAILGRPNVGKSSLLNALLGEERSIVTPIAGTTRDAIDTTYNLYGKN------FILT 226
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DT G+ SK + ED+ +T+ +A A++++ V
Sbjct: 227 DTAGIRKKSK----VKEDIEFYSTL-----------------------RALKALQDADVC 259
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
I ++D GL D + K K I+L VNK + +K
Sbjct: 260 IIMIDATLGLEGQDVNLISLAYK--YKKGILLLVNKWDLIKK 299
>gi|449886519|ref|ZP_21786241.1| GTP-binding protein EngA [Streptococcus mutans SA41]
gi|449915848|ref|ZP_21796534.1| GTP-binding protein EngA [Streptococcus mutans 15JP3]
gi|449937351|ref|ZP_21804499.1| GTP-binding protein EngA [Streptococcus mutans 2ST1]
gi|450038881|ref|ZP_21835917.1| GTP-binding protein EngA [Streptococcus mutans T4]
gi|450078069|ref|ZP_21850804.1| GTP-binding protein EngA [Streptococcus mutans N3209]
gi|450098566|ref|ZP_21858066.1| GTP-binding protein EngA [Streptococcus mutans SF1]
gi|450153914|ref|ZP_21877464.1| GTP-binding protein EngA [Streptococcus mutans 21]
gi|450171033|ref|ZP_21883815.1| GTP-binding protein EngA [Streptococcus mutans SM4]
gi|6681650|dbj|BAA88823.1| phosphoglycerate dehydrogenase [Streptococcus mutans]
gi|449155958|gb|EMB59445.1| GTP-binding protein EngA [Streptococcus mutans 15JP3]
gi|449164419|gb|EMB67481.1| GTP-binding protein EngA [Streptococcus mutans 2ST1]
gi|449201009|gb|EMC02023.1| GTP-binding protein EngA [Streptococcus mutans T4]
gi|449210450|gb|EMC10911.1| GTP-binding protein EngA [Streptococcus mutans N3209]
gi|449221484|gb|EMC21258.1| GTP-binding protein EngA [Streptococcus mutans SF1]
gi|449238340|gb|EMC37110.1| GTP-binding protein EngA [Streptococcus mutans 21]
gi|449244686|gb|EMC43052.1| GTP-binding protein EngA [Streptococcus mutans SM4]
gi|449254131|gb|EMC52055.1| GTP-binding protein EngA [Streptococcus mutans SA41]
Length = 436
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/314 (43%), Positives = 187/314 (59%), Gaps = 46/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAIVDNLPA-----EAQEESSDIIKFSLIGRPNVGKSSLINAILGEDRVIA 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SP++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD
Sbjct: 203 SPVAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSD 259
Query: 460 VVALVIEAMACITE 473
+V +V+ A I E
Sbjct: 260 IVLMVLNAEEGIRE 273
>gi|416125227|ref|ZP_11595825.1| small GTP-binding domain protein [Staphylococcus epidermidis
FRI909]
gi|319400824|gb|EFV89043.1| small GTP-binding domain protein [Staphylococcus epidermidis
FRI909]
Length = 436
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVG+PNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AIEE+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIEEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQMLYKS--KKPVVLAVNKVDNLEMR-NDIYDFYSLGFGDPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K +ED +E+ ++I+GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVVENFNK--ESEDPYDEDT--IRLSIIGRPNVGKSSLVNAILGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSEVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSEVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K I++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTVEKDSKTMKKF 309
>gi|449880562|ref|ZP_21783906.1| GTP-binding protein EngA [Streptococcus mutans SA38]
gi|449990853|ref|ZP_21821737.1| GTP-binding protein EngA [Streptococcus mutans NVAB]
gi|450125940|ref|ZP_21867880.1| GTP-binding protein EngA [Streptococcus mutans U2A]
gi|449181371|gb|EMB83474.1| GTP-binding protein EngA [Streptococcus mutans NVAB]
gi|449231935|gb|EMC31082.1| GTP-binding protein EngA [Streptococcus mutans U2A]
gi|449252840|gb|EMC50809.1| GTP-binding protein EngA [Streptococcus mutans SA38]
Length = 436
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 186/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILAVNK ++P + +F++LG P P+S+ G
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMR-SAIYDFYALGLGDPYPVSSAHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVDNLPA-----EAQEESSDIIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD+V
Sbjct: 205 VAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDIV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|450049808|ref|ZP_21839897.1| GTP-binding protein EngA [Streptococcus mutans NFSM1]
gi|449203298|gb|EMC04164.1| GTP-binding protein EngA [Streptococcus mutans NFSM1]
Length = 436
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 186/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILAVNK ++P + +F++LG P P+S+ G
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMR-SAIYDFYALGLGDPYPVSSAHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVDNLPA-----EAQEESSDIIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD+V
Sbjct: 205 VAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDIV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|229016860|ref|ZP_04173788.1| GTP-binding protein engA [Bacillus cereus AH1273]
gi|229023066|ref|ZP_04179580.1| GTP-binding protein engA [Bacillus cereus AH1272]
gi|423392098|ref|ZP_17369324.1| GTPase Der [Bacillus cereus BAG1X1-3]
gi|423420447|ref|ZP_17397536.1| GTPase Der [Bacillus cereus BAG3X2-1]
gi|228738212|gb|EEL88694.1| GTP-binding protein engA [Bacillus cereus AH1272]
gi|228744421|gb|EEL94495.1| GTP-binding protein engA [Bacillus cereus AH1273]
gi|401102356|gb|EJQ10343.1| GTPase Der [Bacillus cereus BAG3X2-1]
gi|401637931|gb|EJS55684.1| GTPase Der [Bacillus cereus BAG1X1-3]
Length = 436
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 193/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D PG+TRDR+Y W HEF ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGITRDRIYSAGEWLNHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PFLTQ----------IRQQAEVAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ K I+LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 DGVTAADEEVAKILYRS--KKPIVLAVNKVDNPEMR-SDIYDFYALGFGEPFPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + K+E E+ ++E +++GRPNVGKSS++NAL+G++R IVS I
Sbjct: 151 GLGDLLDEAANHFPKIE--EEAYDDET--IRFSLIGRPNVGKSSLVNALLGQERVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT ++ + Q + +IDTAG+RK+ + S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDTPYS-KDDQDYVIIDTAGMRKKGKVYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N L+G R IV + G TRD + + +++++DT G+
Sbjct: 177 RFSLIGRPNVGKSSLVNALLGQERVIVSNIAGTTRDAVDTPYSKDDQDYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++DG+
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSE------FWSLGFSPLP- 335
G+ D++IA + + + +I+ VNK ++ +K M+ E F L ++P+
Sbjct: 270 GIIEQDKKIAGYAHDS--GRAVIIVVNKWDAVKKDEKTMKAFEENIRAHFQFLDYAPIVF 327
Query: 336 ISAISGTGTGELLDLV 351
+SA + T LL ++
Sbjct: 328 LSAKTKKRTQTLLPVI 343
>gi|24380270|ref|NP_722225.1| GTP-binding protein Der [Streptococcus mutans UA159]
gi|449864336|ref|ZP_21778260.1| GTP-binding protein EngA [Streptococcus mutans U2B]
gi|449870782|ref|ZP_21780828.1| GTP-binding protein EngA [Streptococcus mutans 8ID3]
gi|449903709|ref|ZP_21792279.1| GTP-binding protein EngA [Streptococcus mutans M230]
gi|449918828|ref|ZP_21797569.1| GTP-binding protein EngA [Streptococcus mutans 1SM1]
gi|449959016|ref|ZP_21810024.1| GTP-binding protein EngA [Streptococcus mutans 4VF1]
gi|449983891|ref|ZP_21818724.1| GTP-binding protein EngA [Streptococcus mutans NFSM2]
gi|450012214|ref|ZP_21829517.1| GTP-binding protein EngA [Streptococcus mutans A19]
gi|450022680|ref|ZP_21830078.1| GTP-binding protein EngA [Streptococcus mutans U138]
gi|450046712|ref|ZP_21839095.1| GTP-binding protein EngA [Streptococcus mutans N34]
gi|450082882|ref|ZP_21852595.1| GTP-binding protein EngA [Streptococcus mutans N66]
gi|450137546|ref|ZP_21871724.1| GTP-binding protein EngA [Streptococcus mutans NLML1]
gi|450145281|ref|ZP_21874494.1| GTP-binding protein EngA [Streptococcus mutans 1ID3]
gi|450176371|ref|ZP_21885762.1| GTP-binding protein EngA [Streptococcus mutans SM1]
gi|37999686|sp|Q8DS90.1|DER_STRMU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|24378281|gb|AAN59531.1|AE015016_15 phosphoglycerate dehydrogenase [Streptococcus mutans UA159]
gi|449149569|gb|EMB53365.1| GTP-binding protein EngA [Streptococcus mutans 1ID3]
gi|449156006|gb|EMB59491.1| GTP-binding protein EngA [Streptococcus mutans 8ID3]
gi|449159974|gb|EMB63268.1| GTP-binding protein EngA [Streptococcus mutans 1SM1]
gi|449169578|gb|EMB72346.1| GTP-binding protein EngA [Streptococcus mutans 4VF1]
gi|449180845|gb|EMB82982.1| GTP-binding protein EngA [Streptococcus mutans NFSM2]
gi|449188655|gb|EMB90356.1| GTP-binding protein EngA [Streptococcus mutans A19]
gi|449194582|gb|EMB95934.1| GTP-binding protein EngA [Streptococcus mutans U138]
gi|449198425|gb|EMB99538.1| GTP-binding protein EngA [Streptococcus mutans N34]
gi|449214070|gb|EMC14381.1| GTP-binding protein EngA [Streptococcus mutans N66]
gi|449235121|gb|EMC34094.1| GTP-binding protein EngA [Streptococcus mutans NLML1]
gi|449245353|gb|EMC43692.1| GTP-binding protein EngA [Streptococcus mutans SM1]
gi|449260616|gb|EMC58114.1| GTP-binding protein EngA [Streptococcus mutans M230]
gi|449264985|gb|EMC62317.1| GTP-binding protein EngA [Streptococcus mutans U2B]
Length = 436
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/314 (43%), Positives = 187/314 (59%), Gaps = 46/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAIVDNLPT-----EAQEESSDIIKFSLIGRPNVGKSSLINAILGEDRVIA 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SP++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD
Sbjct: 203 SPVAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSD 259
Query: 460 VVALVIEAMACITE 473
+V +V+ A I E
Sbjct: 260 IVLMVLNAEEGIRE 273
>gi|408356596|ref|YP_006845127.1| GTP-binding protein EngA [Amphibacillus xylanus NBRC 15112]
gi|407727367|dbj|BAM47365.1| GTP-binding protein EngA [Amphibacillus xylanus NBRC 15112]
Length = 436
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/310 (46%), Positives = 189/310 (60%), Gaps = 42/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNRLVG +IV D PGVTRDR+Y + W +EF L+DTGG+
Sbjct: 6 VAIVGRPNVGKSTIFNRLVGERISIVDDIPGVTRDRIYSKVEWLSNEFHLIDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E + + RE QA AI E+ VIIF+V+ + G
Sbjct: 62 --------------ELGDEPLLVQMRE------------QADIAINEADVIIFMVNVREG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+TAADEE+A L K+ +K ++LAVNK ++P ++ EF+SLGF P PIS G G
Sbjct: 96 ITAADEEVAKILYKS--NKPVVLAVNKVDNPEMR-EEIYEFYSLGFGEPYPISGSHGLGL 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V K G + EE+ ++GRPNVGKSS++NAL+ +DR IVS I+G
Sbjct: 153 GDLLDRVVELFPKHIG----ISEEDEALHFCVIGRPNVGKSSLVNALLQQDRVIVSNIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDA+D+ F +G + +IDTAG+RKR I S TE S+ RA +AI RSDVV +V
Sbjct: 209 TTRDAVDSPFV-YDGDDYVIIDTAGMRKRGKIYES---TEKYSLLRAMKAIDRSDVVLIV 264
Query: 465 IEAMACITEQ 474
I+A I EQ
Sbjct: 265 IDAETGILEQ 274
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAG 429
R +AIVGRPNVGKS+I N LVGE +IV I G TRD I ++ + F LIDT G
Sbjct: 2 RKAVVAIVGRPNVGKSTIFNRLVGERISIVDDIPGVTRDRIYSKVEWLSNE-FHLIDTGG 60
Query: 430 I 430
I
Sbjct: 61 I 61
>gi|450116857|ref|ZP_21864699.1| GTP-binding protein EngA [Streptococcus mutans ST1]
gi|449226631|gb|EMC26140.1| GTP-binding protein EngA [Streptococcus mutans ST1]
Length = 436
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/314 (43%), Positives = 187/314 (59%), Gaps = 46/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAIVDNLPA-----EAQEESSDIIKFSLIGRPNVGKSSLINAILGEDRVIA 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SP++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD
Sbjct: 203 SPVAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSD 259
Query: 460 VVALVIEAMACITE 473
+V +V+ A I E
Sbjct: 260 IVLMVLNAEEGIRE 273
>gi|450068184|ref|ZP_21847030.1| GTP-binding protein EngA [Streptococcus mutans NLML9]
gi|449207427|gb|EMC08103.1| GTP-binding protein EngA [Streptococcus mutans NLML9]
Length = 436
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 186/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILAVNK ++P + +F++LG P P+S+ G
Sbjct: 93 KEGITDADEYVAKILYRAH--KPVILAVNKVDNPEMR-SAIYDFYALGLGDPYPVSSAHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVDNLPT-----EAQEESSDIIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD+V
Sbjct: 205 VAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDIV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|448821381|ref|YP_007414543.1| GTPase Der [Lactobacillus plantarum ZJ316]
gi|448274878|gb|AGE39397.1| GTPase Der [Lactobacillus plantarum ZJ316]
Length = 436
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 183/312 (58%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y S W EF L+DTGG
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYANSEWLGQEFSLIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I +E P + I +QA AI+E+ VII+LV +
Sbjct: 61 -----------------IDIEDAPFIKQ----------ITQQAEIAIDEADVIIYLVSIK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE +A L ++ +K ++L VNK ++P +V +F+SLGF P PIS G
Sbjct: 94 EGVTDADEHVAQILYRS--NKPVVLGVNKVDNPELR-SEVYDFYSLGFGDPYPISGAHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + G E+E +++GRPNVGKSSI+NAL+GEDR IVS +
Sbjct: 151 GLGDLLDAVIKNFPEKSG-----EDEPGTIRFSLIGRPNVGKSSIVNALLGEDRVIVSDV 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT+FT +G +F ++DTAGIRK+ + + TE SV RA +AI SDV
Sbjct: 206 AGTTRDAIDTKFTDQDGDRFVMVDTAGIRKKGKVYEN---TERYSVMRALKAIDNSDVAL 262
Query: 463 LVIEAMACITEQ 474
VI I EQ
Sbjct: 263 FVINGEEGIREQ 274
>gi|420194779|ref|ZP_14700576.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM021]
gi|394263839|gb|EJE08560.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM021]
Length = 436
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVG+PNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AIEE+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIEEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQMLYKS--KKPVVLAVNKVDNLEMR-NDIYDFYSLGFGDPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K +ED +E+ ++I+GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVVENFNK--ESEDPYDEDT--IRLSIIGRPNVGKSSLVNAILGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSEVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSEVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K I++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTVEKDSKTMKKF 309
>gi|417647073|ref|ZP_12296922.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU144]
gi|418614698|ref|ZP_13177660.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU118]
gi|418616308|ref|ZP_13179233.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU120]
gi|418630503|ref|ZP_13192984.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU128]
gi|418633106|ref|ZP_13195523.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU129]
gi|420163147|ref|ZP_14669894.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM095]
gi|420167877|ref|ZP_14674529.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM087]
gi|420178180|ref|ZP_14684513.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM057]
gi|420179842|ref|ZP_14686119.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM053]
gi|420183144|ref|ZP_14689277.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM049]
gi|420184456|ref|ZP_14690565.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM040]
gi|420190097|ref|ZP_14696041.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM037]
gi|420199417|ref|ZP_14705095.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM031]
gi|420204398|ref|ZP_14709956.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM015]
gi|420211145|ref|ZP_14716519.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM001]
gi|420213941|ref|ZP_14719221.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH05005]
gi|420215938|ref|ZP_14721163.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH05001]
gi|329725422|gb|EGG61905.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU144]
gi|374819234|gb|EHR83362.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU118]
gi|374821134|gb|EHR85201.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU120]
gi|374837693|gb|EHS01256.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU128]
gi|374839925|gb|EHS03432.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU129]
gi|394234836|gb|EJD80410.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM095]
gi|394237905|gb|EJD83391.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM087]
gi|394246806|gb|EJD92058.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM057]
gi|394249607|gb|EJD94820.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM049]
gi|394252437|gb|EJD97472.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM053]
gi|394257107|gb|EJE02029.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM040]
gi|394258988|gb|EJE03858.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM037]
gi|394272199|gb|EJE16668.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM031]
gi|394273408|gb|EJE17839.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM015]
gi|394281598|gb|EJE25824.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM001]
gi|394283863|gb|EJE28024.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH05005]
gi|394292934|gb|EJE36667.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH05001]
Length = 436
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVG+PNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AIEE+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIEEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQMLYKS--KKPVVLAVNKVDNLEMR-NDIYDFYSLGFGDPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K +ED +E+ ++I+GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVVENFNK--ESEDPYDEDT--IRLSIIGRPNVGKSSLVNAILGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSEVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSEVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K I++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTVEKDSKTMKKF 309
>gi|288556077|ref|YP_003428012.1| GTP-binding protein Der [Bacillus pseudofirmus OF4]
gi|288547237|gb|ADC51120.1| GTP-binding protein EngA [Bacillus pseudofirmus OF4]
Length = 437
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/313 (46%), Positives = 192/313 (61%), Gaps = 44/313 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG AIV D PGVTRDR+Y W + EF L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVAIVEDMPGVTRDRLYSHGEWLDREFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + + + QA AIEE+ VI+F+V+G+
Sbjct: 62 ----------------------------ELADEPLLNQMREQAELAIEEADVIVFIVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
G+T+AD+E+A L ++ K ++L VNK ++P + + EF+SLG +P PIS G
Sbjct: 94 EGITSADQEVAKILFRS--KKPVVLGVNKVDNPDMHDL-LYEFYSLGIGNPFPISGSHGL 150
Query: 343 GTGELLDLVCSEL-KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G G+LLD V +KVE +D + RI +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 151 GLGDLLDEVLKHFPEKVE--DDYDPDTIRI---SLIGRPNVGKSSLVNAMLGEERVIVSN 205
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRDAIDT FT +GQ + LIDTAG+RKR + S TE SV R+ +AI RS+VV
Sbjct: 206 IPGTTRDAIDTSFTR-DGQDYVLIDTAGMRKRGKVYES---TEKYSVLRSLKAIERSNVV 261
Query: 462 ALVIEAMACITEQ 474
+VI A I EQ
Sbjct: 262 LVVINAEEGIIEQ 274
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 40/208 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++++GRPNVGKS+L N ++G R IV + PG TRD + +++L+DT G+
Sbjct: 177 RISLIGRPNVGKSSLVNAMLGEERVIVSNIPGTTRDAIDTSFTRDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R + AIE S V++ +++ +
Sbjct: 234 -RKRGKVYE---------------STEKYSVLR--------SLKAIERSNVVLVVINAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQV------SEFWSLGFSPLPI 336
G+ D++IA + + + +I+ VNK ++ + MQ EF L ++P+
Sbjct: 270 GIIEQDKKIAGYAHE--AGRAVIIVVNKWDAIERDDKTMQKFEQKIRDEFLFLSYAPI-- 325
Query: 337 SAISGTGTGELLDLVCSELKKVEGTEDL 364
+ T + L V +KKV +L
Sbjct: 326 -LFTSAKTKQRLQHVLPMVKKVSQNHNL 352
>gi|242242754|ref|ZP_04797199.1| GTP-binding protein EngA [Staphylococcus epidermidis W23144]
gi|420174755|ref|ZP_14681203.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM061]
gi|420192231|ref|ZP_14698091.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM023]
gi|242233890|gb|EES36202.1| GTP-binding protein EngA [Staphylococcus epidermidis W23144]
gi|394244659|gb|EJD89994.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM061]
gi|394261442|gb|EJE06239.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM023]
Length = 436
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVG+PNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AIEE+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIEEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQMLYKS--KKPVVLAVNKVDNLEMR-NDIYDFYSLGFGDPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K +ED +E+ ++I+GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVVENFNK--ESEDPYDEDT--IRLSIIGRPNVGKSSLVNAILGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSEVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSEVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K I++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTVEKDSKTMKKF 309
>gi|116494866|ref|YP_806600.1| GTP-binding protein EngA [Lactobacillus casei ATCC 334]
gi|418005082|ref|ZP_12645081.1| GTP-binding protein [Lactobacillus casei UW1]
gi|122263716|sp|Q039G4.1|DER_LACC3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|116105016|gb|ABJ70158.1| Predicted GTPase [Lactobacillus casei ATCC 334]
gi|410547860|gb|EKQ22084.1| GTP-binding protein [Lactobacillus casei UW1]
Length = 435
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 193/314 (61%), Gaps = 43/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AIVGRPNVGKS +FNR++G +IV D PGVTRDR+YG+S W EF ++DTGG+
Sbjct: 2 VLPTLAIVGRPNVGKSTIFNRILGERVSIVEDTPGVTRDRIYGKSEWLGKEFAVIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+G E P + I+ QA AI+E+ VI+FL D
Sbjct: 62 ------------------DLGDE--PFL----------AQIKDQAEIAIDEADVILFLAD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
++G+T ADE +A L + K ++LAVNK ++P + + +F+SLGF P P+S
Sbjct: 92 IESGVTDADERVAQILYR--AKKPVVLAVNKVDNPERR-QDIYDFYSLGFGEPYPLSGTH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD V + +ED E++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GIGLGDVLDAVLAAFP----SEDKSVEDDSI-KFSLIGRPNVGKSSLVNAILGENRVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI GTTRDAIDT+F + + F +IDTAGIRKR + + TE +V RA RAI RSDV
Sbjct: 204 PIEGTTRDAIDTKFEAVD-ETFTMIDTAGIRKRGKVYEN---TEKYAVMRALRAIDRSDV 259
Query: 461 VALVIEAMACITEQ 474
V VI A I EQ
Sbjct: 260 VLFVINAEEGIREQ 273
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 29/165 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N ++G NR IV G TRD + + + F ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLVNAILGENRVIVSPIEGTTRDAIDTKFEAVDETFTMIDTAGIRKR 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + AV R A AI+ S V++F+++ +
Sbjct: 236 GKVYEN-------------------TEKYAVMR--------ALRAIDRSDVVLFVINAEE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL 329
G+ D+++A + + + II+ VNK ++ K + +F +L
Sbjct: 269 GIREQDKKVAGYAHE--AGRGIIIVVNKWDTVEKDNHTMKDFENL 311
>gi|374338620|ref|YP_005095336.1| GTP-binding protein EngA [Streptococcus macedonicus ACA-DC 198]
gi|372284736|emb|CCF03028.1| GTP-binding protein EngA [Streptococcus macedonicus ACA-DC 198]
Length = 436
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 137/316 (43%), Positives = 188/316 (59%), Gaps = 48/316 (15%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I++QA A+ E+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKQQANIAMTEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NKPVILVVNKVDNPEMR-SDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAI---AIVGRPNVGKSSILNALVGEDRT 397
G GTG++LD + L VEEE+ P I +++GRPNVGKSS++NA++GE+R
Sbjct: 149 GIGTGDVLDAIVENLP--------VEEEDENPDIIKFSLIGRPNVGKSSLINAILGEERV 200
Query: 398 IVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRR 457
I SPI+GTTRDAIDT FT EGQ++ +IDTAG+RK + + TE SV R+ RAI R
Sbjct: 201 IASPIAGTTRDAIDTNFTDSEGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDR 257
Query: 458 SDVVALVIEAMACITE 473
SD+V +VI A I E
Sbjct: 258 SDIVLMVINAEEGIRE 273
>gi|333979257|ref|YP_004517202.1| GTP-binding protein engA [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822738|gb|AEG15401.1| GTP-binding protein engA [Desulfotomaculum kuznetsovii DSM 6115]
Length = 437
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 189/313 (60%), Gaps = 43/313 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRLVG AIV DEPG+TRDR+Y + W F LVDTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRLVGSRIAIVEDEPGITRDRLYQDAEWAGRVFTLVDTGGLDF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V +P + RQ AIEE+ V++FLVD +
Sbjct: 64 VESGD-----------------------------IPRQVRRQVELAIEEADVVLFLVDAR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSEFWSLGFS-PLPISAISG 341
AGLT+ DE++A LR+ K ++L NK E+ R G Q+ +F+ LG P+PISA G
Sbjct: 95 AGLTSTDEDVAALLRRT--KKPVLLVANKVENFQRTG--QLVDFYRLGLGEPIPISAAQG 150
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG+LLD + S L + E EEE IA++GRPNVGKSS++NA++GE R IVS
Sbjct: 151 MNTGDLLDRLVSVLPP-DAAE---EEEPDTIRIAVIGRPNVGKSSLVNAILGEQRVIVSE 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRDAIDT F EG+++ L+DTAGIR+++ I + E SV R+ RA+ R +V
Sbjct: 207 IPGTTRDAIDTYFER-EGRRYMLVDTAGIRRKSRIEEA---VERYSVIRSLRAVDRCEVA 262
Query: 462 ALVIEAMACITEQ 474
+V++A+ +T+Q
Sbjct: 263 LVVLDALEGVTDQ 275
>gi|333398563|ref|ZP_08480376.1| GTP-binding protein Der [Leuconostoc gelidum KCTC 3527]
gi|406600092|ref|YP_006745438.1| GTP-binding protein Der [Leuconostoc gelidum JB7]
gi|406371627|gb|AFS40552.1| GTP-binding protein Der [Leuconostoc gelidum JB7]
Length = 437
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 184/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G AIV D+PGVTRDR+Y + W +EF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRMAGERIAIVEDQPGVTRDRLYAPAEWLNYEFRMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I Q AI+E+ VI+ + G+
Sbjct: 62 ----------------------------ELGDAPFLAEIRAQVELAIDEADVIVMITSGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ADE +A L K DK ++LA+NK ++P + +F+SLG P P+S G
Sbjct: 94 EGVTSADEVVAKMLYKT--DKPVVLAINKVDNPEMR-QDIYDFYSLGLGDPFPVSGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V E E E+E I +I+GRPNVGKSSI+NA++GEDR IVS I
Sbjct: 151 GLGDLLDEVVKHFPD-EAAEQ--EDEGAI-KFSIIGRPNVGKSSIVNAMLGEDRVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID+ F PEG +F ++DTAG+RKR + + TE SV RA +AI S+V+
Sbjct: 207 EGTTRDAIDSRFVTPEGDEFIMVDTAGMRKRGKVYEN---TEKYSVMRALKAIDNSNVIL 263
Query: 463 LVIEAMACITEQ 474
+VI+A A I EQ
Sbjct: 264 MVIDAEAGIREQ 275
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 37/205 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +I+GRPNVGKS++ N ++G +R IV + G TRD + R E EF++VDT G+
Sbjct: 177 KFSIIGRPNVGKSSIVNAMLGEDRVIVSNIEGTTRDAIDSRFVTPEGDEFIMVDTAGMRK 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S VI+ ++D +
Sbjct: 237 RGKVYEN-------------------TEKYSVMR--------ALKAIDNSNVILMVIDAE 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL------PIS 337
AG+ D+ +A + + + +I+ VNK ++ K + EF +L S PI+
Sbjct: 270 AGIREQDKHVAGFAHE--AGRAMIIVVNKWDAVEKDDHTMKEFENLIRSEFKFLDYAPIT 327
Query: 338 AISGTGTGELLDLVCSELKKVEGTE 362
+S TG+ LD + +K V+
Sbjct: 328 FVSAK-TGQRLDRLPQLVKDVDNNH 351
>gi|295696375|ref|YP_003589613.1| ribosome-associated GTPase EngA [Kyrpidia tusciae DSM 2912]
gi|295411977|gb|ADG06469.1| ribosome-associated GTPase EngA [Kyrpidia tusciae DSM 2912]
Length = 451
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 149/310 (48%), Positives = 184/310 (59%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNR+VGG AIV D+PGVTRDR+Y + W F ++DTGG L+
Sbjct: 13 VAIVGRPNVGKSTLFNRIVGGRIAIVEDKPGVTRDRLYALASWNGRGFRIIDTGG-LDFG 71
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
S AI +I Q A+EE+ +IFLVDG +G
Sbjct: 72 GSD-------AIVKSI---------------------RAQVELALEEADAVIFLVDGISG 103
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T ADEEIA LR+ K ++LAVNK ++P + I Q EF+ LG P PISA G G
Sbjct: 104 ITPADEEIAGRLRR--AGKPVVLAVNKLDNPNRMIAQ-YEFFRLGLGDPFPISAEHGLGI 160
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V L ED E ++ +A++GRPNVGKSS++N L+GE+R +VS I G
Sbjct: 161 GDLLDAVVRRLP----PEDTGEPDHDAIRVAVIGRPNVGKSSLVNRLLGEERVLVSEIPG 216
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDA+DT F EG F LIDTAG+RKR + TE SV RA RAI RSDV LV
Sbjct: 217 TTRDAVDTLFE-REGHSFILIDTAGLRKRGRVWED---TEKYSVLRALRAIDRSDVCLLV 272
Query: 465 IEAMACITEQ 474
I+ I EQ
Sbjct: 273 IDGKQGIAEQ 282
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 38/204 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P+H RVA++GRPNVGKS+L NRL+G R +V + PG TRD + H F+L+DT
Sbjct: 179 PDHDAIRVAVIGRPNVGKSSLVNRLLGEERVLVSEIPGTTRDAVDTLFEREGHSFILIDT 238
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + + ED T + +V R A AI+ S V +
Sbjct: 239 AGL----RKRGRVWED---------------TEKYSVLR--------ALRAIDRSDVCLL 271
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVS-----EFWSLG 330
++DG+ G+ D+ +A + + + + VNK E K ++++ EF +
Sbjct: 272 VIDGKQGIAEQDKRVAGYAVD--AGRAVAVVVNKWDLVEKDDKTAVRMTEEIRQEFAFMT 329
Query: 331 FSPLP-ISAISGTGTGELLDLVCS 353
++P+ +SA +G G +LDLV
Sbjct: 330 WAPVVFVSAKTGQRVGRILDLVVQ 353
>gi|329766866|ref|ZP_08258394.1| GTP-binding protein engA [Gemella haemolysans M341]
gi|328837591|gb|EGF87216.1| GTP-binding protein engA [Gemella haemolysans M341]
Length = 435
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 186/312 (59%), Gaps = 43/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS +FN+++G +IV D GVTRDR+Y ++ W + F ++DTGG
Sbjct: 4 PTVAIIGRPNVGKSTIFNKIIGDRLSIVEDVAGVTRDRIYSKAEWLNYSFFMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I +E P + I QA AI+E+ VIIFL +G+
Sbjct: 61 -----------------IELEDTPFQKQ----------IRAQAELAIDEADVIIFLTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ DEE+A L K DK ++LAVNK ++ M + +F+SLGF P PIS G
Sbjct: 94 DGVTSDDEEVAKLLYKT--DKPVVLAVNKIDNFDMNHM-IYDFYSLGFGDPFPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD VC K +E EEE+ +++GRPNVGKSS++N ++GE+R I S I
Sbjct: 151 GIGDLLDEVCKNFKVLEE-----EEEDDKIRFSLIGRPNVGKSSLINTILGEERVIASDI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT+F G ++ +IDTAGIRKR + S E SV R+ +AI RSDVV
Sbjct: 206 AGTTRDAIDTDFK-HNGDEYVVIDTAGIRKRGKVYES---CEKYSVLRSLKAIERSDVVL 261
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 262 VVLNAEEGIIEQ 273
>gi|194016775|ref|ZP_03055388.1| ribosome-associated GTPase EngA [Bacillus pumilus ATCC 7061]
gi|194011381|gb|EDW20950.1| ribosome-associated GTPase EngA [Bacillus pumilus ATCC 7061]
Length = 436
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 190/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I QA A++E+ VIIF+V+G+
Sbjct: 62 ----------------DIGDE--PFLAQ----------IRHQAEIAMDEADVIIFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ADEE+A L + K ++LAVNK ++P V +F++LGF P PIS G
Sbjct: 94 DGVTSADEEVAKILYRT--KKPVVLAVNKLDNPEMR-SDVYDFYALGFGEPYPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K + T+ + ++ ++GRPNVGKSS++NA++GEDR IVS I
Sbjct: 151 GLGDLLDAVAEHFKNLPDTQ----YDEQVVQFCLIGRPNVGKSSLVNAMLGEDRVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT FT + + F ++DTAG+RK+ + TTE SV RA +AI RSDVVA
Sbjct: 207 AGTTRDAVDTMFTYNQ-RDFVIVDTAGMRKKGKVY---ETTEKYSVLRALKAIDRSDVVA 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ ++GRPNVGKS+L N ++G +R IV + G TRD + + + +F++VDT G+
Sbjct: 177 QFCLIGRPNVGKSSLVNAMLGEDRVIVSNIAGTTRDAVDTMFTYNQRDFVIVDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AI+ S V+ ++DG+
Sbjct: 234 -RKKGKVYE---------------TTEKYSVLR--------ALKAIDRSDVVAVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + K +++ VNK ++ K + EF
Sbjct: 270 GIIEQDKRIAGYAHE--AGKAVVIVVNKWDAVEKDERTMKEF 309
>gi|227524465|ref|ZP_03954514.1| GTP-binding protein EngA [Lactobacillus hilgardii ATCC 8290]
gi|227088335|gb|EEI23647.1| GTP-binding protein EngA [Lactobacillus hilgardii ATCC 8290]
Length = 435
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 135/313 (43%), Positives = 191/313 (61%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P VA +GRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W +EF ++DTGG
Sbjct: 3 MPTVAFIGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYTHAEWLANEFAMIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T+ I+ QA AIEE+ VI+F+V
Sbjct: 61 ------------------IQISDAPFNTQ----------IKNQAEIAIEEADVIVFIVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ GLT+ DE++A L ++ DK ++LAVNK ++P + +F++LGF P+PIS + G
Sbjct: 93 KEGLTSDDEQVAKILYRS--DKPVVLAVNKADNP-DAREDIYDFYALGFGDPMPISGVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + + K G ++ ++ R +I+GRPNVGKSS++NA++GE+R IVS
Sbjct: 150 TGIGDLLDKIVEKFPKETG--NVPNDDIRF---SIIGRPNVGKSSLVNAILGENRVIVSD 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT F + KF ++DTAGIRKR + + TE SV RA +AI +SDV+
Sbjct: 205 VAGTTRDAIDTRFEA-DNIKFTMVDTAGIRKRGKVYEN---TERYSVMRAMKAIDQSDVI 260
Query: 462 ALVIEAMACITEQ 474
VI A I EQ
Sbjct: 261 LFVINAEGGIREQ 273
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 156 GNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFML 215
GNVP + R +I+GRPNVGKS+L N ++G NR IV D G TRD + R +F +
Sbjct: 168 GNVPNDDI-RFSIIGRPNVGKSSLVNAILGENRVIVSDVAGTTRDAIDTRFEADNIKFTM 226
Query: 216 VDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCV 275
VDT G+ K N T +V R A AI++S V
Sbjct: 227 VDTAGIRKRGKVYEN-------------------TERYSVMR--------AMKAIDQSDV 259
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG--------IMQVSEFW 327
I+F+++ + G+ D+++A + + K II VNK ++ +K + +EF
Sbjct: 260 ILFVINAEGGIREQDKKVAGYAHE--AGKAIITVVNKWDTLKKTNHTQQDFETLIRNEFQ 317
Query: 328 SLGFSPL 334
+ +SP+
Sbjct: 318 YMAYSPI 324
>gi|450121548|ref|ZP_21866354.1| GTP-binding protein EngA [Streptococcus mutans ST6]
gi|449229111|gb|EMC28445.1| GTP-binding protein EngA [Streptococcus mutans ST6]
Length = 436
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 137/314 (43%), Positives = 187/314 (59%), Gaps = 46/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRAH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAIVDNLPT-----EAQEENSDIIKFSLIGRPNVGKSSLINAILGEDRVIA 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SP++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD
Sbjct: 203 SPVAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSD 259
Query: 460 VVALVIEAMACITE 473
+V +V+ A I E
Sbjct: 260 IVLMVLNAEEGIRE 273
>gi|329116373|ref|ZP_08245090.1| ribosome biogenesis GTPase Der [Streptococcus parauberis NCFD 2020]
gi|333905625|ref|YP_004479496.1| GTP-binding protein EngA [Streptococcus parauberis KCTC 11537]
gi|326906778|gb|EGE53692.1| ribosome biogenesis GTPase Der [Streptococcus parauberis NCFD 2020]
gi|333120890|gb|AEF25824.1| GTP-binding protein EngA [Streptococcus parauberis KCTC 11537]
gi|456370315|gb|EMF49211.1| GTP-binding protein [Streptococcus parauberis KRS-02109]
gi|457096112|gb|EMG26583.1| GTP-binding protein [Streptococcus parauberis KRS-02083]
Length = 436
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 134/313 (42%), Positives = 187/313 (59%), Gaps = 42/313 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A++E+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMDEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + +K +ILAVNK ++P + +F++LG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NKPVILAVNKVDNPEMR-NDIYDFYALGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L ++ EE + + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDVLDAIVENLPI-----EVTEENDDVIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT F +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTSFKDEDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>gi|282916742|ref|ZP_06324500.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus D139]
gi|282319229|gb|EFB49581.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus D139]
Length = 436
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V S G E+ + ++I+GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GLGDLLDAVVSHF----GEEEEDPYDEDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ EGQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YEGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
>gi|27468081|ref|NP_764718.1| GTP-binding protein EngA [Staphylococcus epidermidis ATCC 12228]
gi|57867002|ref|YP_188620.1| GTP-binding protein EngA [Staphylococcus epidermidis RP62A]
gi|251810897|ref|ZP_04825370.1| GTP-binding protein EngA [Staphylococcus epidermidis BCM-HMP0060]
gi|282876093|ref|ZP_06284960.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis SK135]
gi|293366558|ref|ZP_06613235.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417656170|ref|ZP_12305861.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU028]
gi|417659723|ref|ZP_12309323.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU045]
gi|417908683|ref|ZP_12552440.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU037]
gi|417912175|ref|ZP_12555870.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU105]
gi|417913665|ref|ZP_12557328.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU109]
gi|418605774|ref|ZP_13169081.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU041]
gi|418606655|ref|ZP_13169925.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU057]
gi|418609700|ref|ZP_13172836.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU065]
gi|418613256|ref|ZP_13176270.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU117]
gi|418621880|ref|ZP_13184645.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU123]
gi|418625080|ref|ZP_13187738.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU125]
gi|418627787|ref|ZP_13190357.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU126]
gi|418629103|ref|ZP_13191617.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU127]
gi|418664556|ref|ZP_13226024.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU081]
gi|419769438|ref|ZP_14295532.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-250]
gi|419771816|ref|ZP_14297862.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-K]
gi|420170194|ref|ZP_14676755.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM070]
gi|420172533|ref|ZP_14679032.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM067]
gi|420187316|ref|ZP_14693337.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM039]
gi|420197361|ref|ZP_14703085.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM020]
gi|420201610|ref|ZP_14707220.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM018]
gi|420206201|ref|ZP_14711711.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM008]
gi|420208986|ref|ZP_14714424.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM003]
gi|420220831|ref|ZP_14725788.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH04008]
gi|420221735|ref|ZP_14726661.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH08001]
gi|420225677|ref|ZP_14730504.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH06004]
gi|420227265|ref|ZP_14732037.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH05003]
gi|420229584|ref|ZP_14734290.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH04003]
gi|420231999|ref|ZP_14736641.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH051668]
gi|420234643|ref|ZP_14739203.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH051475]
gi|421607026|ref|ZP_16048276.1| GTP-binding protein Der [Staphylococcus epidermidis AU12-03]
gi|37999682|sp|Q8CP62.1|DER_STAES RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|71151866|sp|Q5HP70.1|DER_STAEQ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|27315626|gb|AAO04760.1|AE016747_257 GTP binding protein [Staphylococcus epidermidis ATCC 12228]
gi|57637660|gb|AAW54448.1| GTP-binding protein, Era/TrmE family [Staphylococcus epidermidis
RP62A]
gi|251805577|gb|EES58234.1| GTP-binding protein EngA [Staphylococcus epidermidis BCM-HMP0060]
gi|281295118|gb|EFA87645.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis SK135]
gi|291319327|gb|EFE59696.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329735360|gb|EGG71652.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU045]
gi|329737420|gb|EGG73674.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU028]
gi|341651186|gb|EGS74991.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU105]
gi|341654687|gb|EGS78425.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU109]
gi|341656044|gb|EGS79767.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU037]
gi|374401477|gb|EHQ72550.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU041]
gi|374406639|gb|EHQ77531.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU065]
gi|374407431|gb|EHQ78293.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU057]
gi|374410366|gb|EHQ81124.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU081]
gi|374816191|gb|EHR80398.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU117]
gi|374825968|gb|EHR89884.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU125]
gi|374828308|gb|EHR92147.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU123]
gi|374828934|gb|EHR92757.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU126]
gi|374834534|gb|EHR98173.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU127]
gi|383358057|gb|EID35518.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-250]
gi|383360635|gb|EID38030.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-K]
gi|394240532|gb|EJD85955.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM070]
gi|394241694|gb|EJD87103.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM067]
gi|394256295|gb|EJE01228.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM039]
gi|394266168|gb|EJE10814.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM020]
gi|394271878|gb|EJE16357.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM018]
gi|394278040|gb|EJE22357.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM008]
gi|394279214|gb|EJE23522.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM003]
gi|394285719|gb|EJE29792.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH04008]
gi|394290146|gb|EJE34013.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH08001]
gi|394293111|gb|EJE36834.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH06004]
gi|394297355|gb|EJE40956.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH05003]
gi|394299350|gb|EJE42901.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH04003]
gi|394301721|gb|EJE45175.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH051668]
gi|394303886|gb|EJE47296.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH051475]
gi|406657319|gb|EKC83708.1| GTP-binding protein Der [Staphylococcus epidermidis AU12-03]
Length = 436
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVG+PNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERISIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AIEE+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIEEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQMLYKS--KKPVVLAVNKVDNLEMR-NDIYDFYSLGFGDPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K +ED +E+ ++I+GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVVENFNK--ESEDPYDEDT--IRLSIIGRPNVGKSSLVNAILGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSEVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSEVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K I++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTVEKDSKTMKKF 309
>gi|420165478|ref|ZP_14672169.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM088]
gi|394235279|gb|EJD80851.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM088]
Length = 436
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVG+PNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERISIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AIEE+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIEEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQMLYKS--KKPVVLAVNKVDNLEMR-NDIYDFYSLGFGDPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K +ED +E+ ++I+GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVVENFNK--ESEDPYDEDT--IRLSIIGRPNVGKSSLVNAILGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSEVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSEVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K I++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTVEKDSKTMKKF 309
>gi|417980665|ref|ZP_12621345.1| GTP-binding protein [Lactobacillus casei 12A]
gi|410524988|gb|EKP99895.1| GTP-binding protein [Lactobacillus casei 12A]
Length = 435
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 142/314 (45%), Positives = 193/314 (61%), Gaps = 43/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AIVGRPNVGKS +FNR++G +IV D PGVTRDR+YG S W EF ++DTGG+
Sbjct: 2 VLPTLAIVGRPNVGKSTIFNRILGERVSIVEDTPGVTRDRIYGTSEWLSKEFAVIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
DL E +A+ I+ QA AI+E+ VI+FL D
Sbjct: 62 ------------DLG--------------DEPFLAQ----IKDQAEIAIDEADVILFLAD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
++G+T ADE +A L + K ++LAVNK ++P + + +F+SLGF P P+S
Sbjct: 92 IESGVTDADERVAQILYR--AKKPVVLAVNKVDNPERR-QDIYDFYSLGFGEPYPLSGTH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD V + +ED E++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GIGLGDVLDAVLAAFP----SEDKSVEDDSI-KFSLIGRPNVGKSSLVNAILGENRVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI GTTRDAIDT+F + + F +IDTAGIRKR + + TE +V RA RAI RSDV
Sbjct: 204 PIEGTTRDAIDTKFEAVD-ETFTMIDTAGIRKRGKVYEN---TEKYAVMRALRAIDRSDV 259
Query: 461 VALVIEAMACITEQ 474
V VI A I EQ
Sbjct: 260 VLFVINAEEGIREQ 273
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 29/165 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N ++G NR IV G TRD + + + F ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLVNAILGENRVIVSPIEGTTRDAIDTKFEAVDETFTMIDTAGIRKR 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + AV R A AI+ S V++F+++ +
Sbjct: 236 GKVYEN-------------------TEKYAVMR--------ALRAIDRSDVVLFVINAEE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL 329
G+ D+++A + + + II+ VNK ++ K + +F +L
Sbjct: 269 GIREQDKKVAGY--SHEAGRGIIIVVNKWDTVEKDNHTMKDFENL 311
>gi|449980734|ref|ZP_21817376.1| GTP-binding protein EngA [Streptococcus mutans 5SM3]
gi|450006885|ref|ZP_21827439.1| GTP-binding protein EngA [Streptococcus mutans NMT4863]
gi|449176522|gb|EMB78864.1| GTP-binding protein EngA [Streptococcus mutans 5SM3]
gi|449187180|gb|EMB88976.1| GTP-binding protein EngA [Streptococcus mutans NMT4863]
Length = 436
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 137/314 (43%), Positives = 187/314 (59%), Gaps = 46/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRAH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAIVDNLPT-----EAQEENSDIIKFSLIGRPNVGKSSLINAILGEDRVIA 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SP++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD
Sbjct: 203 SPVAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSD 259
Query: 460 VVALVIEAMACITE 473
+V +V+ A I E
Sbjct: 260 IVLMVLNAEEGIRE 273
>gi|254556748|ref|YP_003063165.1| GTP-binding protein EngA [Lactobacillus plantarum JDM1]
gi|300767479|ref|ZP_07077391.1| ribosome-associated GTPase EngA [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308180691|ref|YP_003924819.1| GTP-binding protein EngA [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|380032671|ref|YP_004889662.1| ribosome-associated GTPase [Lactobacillus plantarum WCFS1]
gi|418275431|ref|ZP_12890754.1| ribosome-associated GTPase [Lactobacillus plantarum subsp.
plantarum NC8]
gi|37999659|sp|Q88VZ6.1|DER_LACPL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254045675|gb|ACT62468.1| GTP-binding protein EngA [Lactobacillus plantarum JDM1]
gi|300495298|gb|EFK30454.1| ribosome-associated GTPase EngA [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308046182|gb|ADN98725.1| GTP-binding protein EngA [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|342241914|emb|CCC79148.1| ribosome-associated GTPase [Lactobacillus plantarum WCFS1]
gi|376008982|gb|EHS82311.1| ribosome-associated GTPase [Lactobacillus plantarum subsp.
plantarum NC8]
Length = 436
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 183/312 (58%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y S W EF L+DTGG
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYANSEWLGQEFSLIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I +E P + I +QA AI+E+ VII+LV +
Sbjct: 61 -----------------IDIEDAPFIKQ----------ITQQAEIAIDEADVIIYLVSIK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE +A L ++ +K ++L VNK ++P +V +F+SLGF P PIS G
Sbjct: 94 EGVTDADEHVAQILYRS--NKPVVLGVNKVDNPELR-SEVYDFYSLGFGDPYPISGAHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + G E+E +++GRPNVGKSSI+NAL+GEDR IVS +
Sbjct: 151 GLGDLLDAVIKNFPEKSG-----EDEPGTIRFSLIGRPNVGKSSIVNALLGEDRVIVSDV 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT+FT +G +F ++DTAGIRK+ + + TE SV RA +AI SDV
Sbjct: 206 AGTTRDAIDTKFTDQDGDRFVMVDTAGIRKKGKVYEN---TERYSVMRALKAIDNSDVAL 262
Query: 463 LVIEAMACITEQ 474
VI I EQ
Sbjct: 263 FVINGEEGIREQ 274
>gi|450000380|ref|ZP_21825096.1| GTP-binding protein EngA [Streptococcus mutans N29]
gi|449185759|gb|EMB87629.1| GTP-binding protein EngA [Streptococcus mutans N29]
Length = 436
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 186/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILAVNK ++P + +F++LG P P+S+ G
Sbjct: 93 KEGITDADEYVAKILYRAH--KPVILAVNKVDNPEMR-SAIYDFYALGLGDPYPVSSAHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVDNLPT-----EAQEENSDIIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD+V
Sbjct: 205 VAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDIV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|410459388|ref|ZP_11313139.1| GTP-binding protein Der [Bacillus azotoformans LMG 9581]
gi|409930364|gb|EKN67365.1| GTP-binding protein Der [Bacillus azotoformans LMG 9581]
Length = 436
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERISIVEDVPGVTRDRIYSSGEWLNVTFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+G E + + R+ QA AIEE+ VI+F+V+G+
Sbjct: 62 ----------------EVGDEPLLVQMRQ------------QAEIAIEEADVIVFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ K I+LAVNK ++ Q+ EF+SLGF P PIS G
Sbjct: 94 EGITAADEEVAKLLFRS--QKPIVLAVNKIDNHEMK-DQIYEFYSLGFGEPFPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K E ++ + ++GRPNVGKSS++NA++GEDR IVS I
Sbjct: 151 GLGDLLDEVVKNFPKSSDEE----YDDSVIQFCLIGRPNVGKSSLVNAILGEDRVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT+ T EGQ++ +IDTAG+RKR + + E SV RA +AI RSDVV
Sbjct: 207 EGTTRDAIDTKLT-REGQEYVIIDTAGMRKRGKVYEN---LEKYSVLRALKAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+ I EQ
Sbjct: 263 VVIDGEKGIIEQ 274
>gi|418325423|ref|ZP_12936629.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU071]
gi|365228025|gb|EHM69210.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU071]
Length = 436
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVG+PNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AIEE+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIEEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQMLYKS--KKPVVLAVNKVDNLEMR-NDIYDFYSLGFGDPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K +ED +E+ ++I+GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVVENFNK--ESEDPYDEDT--IRLSIIGRPNVGKSSLVNAILGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSEVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAELGIIEQ 274
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSEVVLVVIDAEL 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K I++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTVEKDSKTMKKF 309
>gi|219850590|ref|YP_002465023.1| GTP-binding protein EngA [Chloroflexus aggregans DSM 9485]
gi|254783144|sp|B8GAY7.1|DER_CHLAD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|219544849|gb|ACL26587.1| small GTP-binding protein [Chloroflexus aggregans DSM 9485]
Length = 449
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 185/312 (59%), Gaps = 35/312 (11%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS FNRL+G RAIV D PG TRDR+YG +FW EF +VDT G+L
Sbjct: 4 PIVAIVGRPNVGKSTFFNRLIGERRAIVEDIPGTTRDRLYGDTFWNGREFTVVDTAGLL- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
G E L E +AR + QA AI E+ IIF+VDG+
Sbjct: 63 -----------------FGDEDPSLP--EVEIARRTRV---QAEHAIAEADAIIFMVDGR 100
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD ++AD LR K ++LAVNKC+S + ++ EF++L P+P+SA G
Sbjct: 101 DGLTTADADVADILRTT--AKPVVLAVNKCDSQER-MLDAVEFYALNLGDPIPMSAFHGL 157
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG++LD L + + ++E R +AIVGRPNVGKSS+LN L+G++R++VSPI
Sbjct: 158 GTGDVLD----RLTEYFPPKTFEKDEERHLRVAIVGRPNVGKSSLLNRLLGKERSVVSPI 213
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD IDT T G+ LIDTAGIR+ I E SV R RAI R DV
Sbjct: 214 PGTTRDPIDTTITY-YGEPITLIDTAGIRRAGKIERG---IEKYSVLRTLRAIERCDVAM 269
Query: 463 LVIEAMACITEQ 474
L+++A +T Q
Sbjct: 270 LLVDATEGVTAQ 281
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 100/222 (45%), Gaps = 51/222 (22%)
Query: 161 HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM-YGRSFWGEHEFMLVDTG 219
HL RVAIVGRPNVGKS+L NRL+G R++V PG TRD + +++GE L+DT
Sbjct: 182 HL--RVAIVGRPNVGKSSLLNRLLGKERSVVSPIPGTTRDPIDTTITYYGE-PITLIDTA 238
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ K + I E ++ T+ AIE V + L
Sbjct: 239 GIRRAGKIERGI-EKYSVLRTL--------------------------RAIERCDVAMLL 271
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGF 331
VD G+TA D IA + + K +IL VNK ++ K EF + +
Sbjct: 272 VDATEGVTAQDTHIAGMVIE--AKKGLILVVNKWDAITKDSQTYYEFEHRVREAFKFVDY 329
Query: 332 SPLP-ISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIP 372
+P+ ISA++G LLD E + + RIP
Sbjct: 330 APIVFISALTGQRVSHLLDY---------AREIYAQRQKRIP 362
>gi|227513321|ref|ZP_03943370.1| GTP-binding protein EngA [Lactobacillus buchneri ATCC 11577]
gi|227083194|gb|EEI18506.1| GTP-binding protein EngA [Lactobacillus buchneri ATCC 11577]
Length = 435
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 135/313 (43%), Positives = 191/313 (61%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P VA +GRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W +EF ++DTGG
Sbjct: 3 MPTVAFIGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYTHAEWLANEFAMIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T+ I+ QA AIEE+ VI+F+V
Sbjct: 61 ------------------IQISDAPFNTQ----------IKNQAEIAIEEADVIVFIVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ GLT+ DE++A L ++ DK ++LAVNK ++P + +F++LGF P+PIS + G
Sbjct: 93 KEGLTSDDEQVAKILYRS--DKPVVLAVNKADNP-DAREDIYDFYALGFGDPMPISGVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + + K G ++ ++ R +I+GRPNVGKSS++NA++GE+R IVS
Sbjct: 150 TGIGDLLDKIVEKFPKETG--NVPNDDIRF---SIIGRPNVGKSSLVNAILGENRVIVSD 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT F + KF ++DTAGIRKR + + TE SV RA +AI +SDV+
Sbjct: 205 VAGTTRDAIDTRFEA-DNIKFTMVDTAGIRKRGKVYEN---TERYSVMRAMKAIDQSDVI 260
Query: 462 ALVIEAMACITEQ 474
VI A I EQ
Sbjct: 261 LFVINAEEGIREQ 273
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 156 GNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFML 215
GNVP + R +I+GRPNVGKS+L N ++G NR IV D G TRD + R +F +
Sbjct: 168 GNVPNDDI-RFSIIGRPNVGKSSLVNAILGENRVIVSDVAGTTRDAIDTRFEADNIKFTM 226
Query: 216 VDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCV 275
VDT G+ K N T +V R A AI++S V
Sbjct: 227 VDTAGIRKRGKVYEN-------------------TERYSVMR--------AMKAIDQSDV 259
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG--------IMQVSEFW 327
I+F+++ + G+ D+++A + + K II VNK ++ +K + +EF
Sbjct: 260 ILFVINAEEGIREQDKKVAGYAHE--AGKAIITVVNKWDTLKKTNHTQQDFETLIRNEFQ 317
Query: 328 SLGFSPL 334
+ +SP+
Sbjct: 318 YMAYSPI 324
>gi|163119516|ref|YP_079584.2| GTP-binding protein EngA [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319645250|ref|ZP_07999483.1| GTP-binding protein engA [Bacillus sp. BT1B_CT2]
gi|404489675|ref|YP_006713781.1| GTP-binding protein Der [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423682758|ref|ZP_17657597.1| GTP-binding protein EngA [Bacillus licheniformis WX-02]
gi|81825274|sp|Q65I15.1|DER_BACLD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|52348665|gb|AAU41299.1| GTPase EngA [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|145903023|gb|AAU23946.2| GTP-binding protein essential for cell growth [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|317393059|gb|EFV73853.1| GTP-binding protein engA [Bacillus sp. BT1B_CT2]
gi|383439532|gb|EID47307.1| GTP-binding protein EngA [Bacillus licheniformis WX-02]
Length = 436
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 185/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W H+F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNHDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E + I QA A+EE+ VIIF+ +G+
Sbjct: 62 ----------------------------EVGDEPFLAQIRHQAEIAMEEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L + K ++LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 EGVTAADEEVAKILYRT--KKPVVLAVNKVDNPEMR-ANIYDFYALGFGEPFPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K + T+ E+ + ++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GLGDLLDAVSEHFKNIPETK----YEDEVVQFCLIGRPNVGKSSLVNAMIGEERVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT FT + + F ++DTAG+RK+ + + TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTRFTYNQ-RDFVIVDTAGMRKKGKVYEA---TEKYSVLRALKAIDRSEVVC 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 33/174 (18%)
Query: 157 NVPEHL----LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
N+PE + + ++GRPNVGKS+L N ++G R IV + G TRD + R + + +
Sbjct: 165 NIPETKYEDEVVQFCLIGRPNVGKSSLVNAMIGEERVIVSNIAGTTRDAIDTRFTYNQRD 224
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F++VDT G+ + + + E AT + +V R A AI+
Sbjct: 225 FVIVDTAGM----RKKGKVYE---------------ATEKYSVLR--------ALKAIDR 257
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
S V+ ++DG+ G+ D+ IA + + K +++ VNK ++ K + EF
Sbjct: 258 SEVVCVVLDGEEGIIEQDKRIAGYAHE--AGKAVVIVVNKWDAVEKDERTMKEF 309
>gi|163939419|ref|YP_001644303.1| GTP-binding protein EngA [Bacillus weihenstephanensis KBAB4]
gi|229010911|ref|ZP_04168107.1| GTP-binding protein engA [Bacillus mycoides DSM 2048]
gi|229058239|ref|ZP_04196627.1| GTP-binding protein engA [Bacillus cereus AH603]
gi|229132411|ref|ZP_04261265.1| GTP-binding protein engA [Bacillus cereus BDRD-ST196]
gi|229166450|ref|ZP_04294206.1| GTP-binding protein engA [Bacillus cereus AH621]
gi|423366656|ref|ZP_17344089.1| GTPase Der [Bacillus cereus VD142]
gi|423454939|ref|ZP_17431792.1| GTPase Der [Bacillus cereus BAG5X1-1]
gi|423472516|ref|ZP_17449259.1| GTPase Der [Bacillus cereus BAG6O-2]
gi|423486721|ref|ZP_17463403.1| GTPase Der [Bacillus cereus BtB2-4]
gi|423492445|ref|ZP_17469089.1| GTPase Der [Bacillus cereus CER057]
gi|423500764|ref|ZP_17477381.1| GTPase Der [Bacillus cereus CER074]
gi|423509424|ref|ZP_17485955.1| GTPase Der [Bacillus cereus HuA2-1]
gi|423516264|ref|ZP_17492745.1| GTPase Der [Bacillus cereus HuA2-4]
gi|423524594|ref|ZP_17501067.1| GTPase Der [Bacillus cereus HuA4-10]
gi|423555629|ref|ZP_17531932.1| GTPase Der [Bacillus cereus MC67]
gi|423594467|ref|ZP_17570498.1| GTPase Der [Bacillus cereus VD048]
gi|423601055|ref|ZP_17577055.1| GTPase Der [Bacillus cereus VD078]
gi|423663514|ref|ZP_17638683.1| GTPase Der [Bacillus cereus VDM022]
gi|423667288|ref|ZP_17642317.1| GTPase Der [Bacillus cereus VDM034]
gi|423676679|ref|ZP_17651618.1| GTPase Der [Bacillus cereus VDM062]
gi|229710726|sp|A9VMB3.1|DER_BACWK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|163861616|gb|ABY42675.1| small GTP-binding protein [Bacillus weihenstephanensis KBAB4]
gi|228617024|gb|EEK74093.1| GTP-binding protein engA [Bacillus cereus AH621]
gi|228651117|gb|EEL07098.1| GTP-binding protein engA [Bacillus cereus BDRD-ST196]
gi|228720103|gb|EEL71687.1| GTP-binding protein engA [Bacillus cereus AH603]
gi|228750311|gb|EEM00141.1| GTP-binding protein engA [Bacillus mycoides DSM 2048]
gi|401087135|gb|EJP95344.1| GTPase Der [Bacillus cereus VD142]
gi|401135218|gb|EJQ42821.1| GTPase Der [Bacillus cereus BAG5X1-1]
gi|401155050|gb|EJQ62464.1| GTPase Der [Bacillus cereus CER074]
gi|401155929|gb|EJQ63336.1| GTPase Der [Bacillus cereus CER057]
gi|401165170|gb|EJQ72489.1| GTPase Der [Bacillus cereus HuA2-4]
gi|401170437|gb|EJQ77678.1| GTPase Der [Bacillus cereus HuA4-10]
gi|401197033|gb|EJR03971.1| GTPase Der [Bacillus cereus MC67]
gi|401224264|gb|EJR30822.1| GTPase Der [Bacillus cereus VD048]
gi|401231601|gb|EJR38104.1| GTPase Der [Bacillus cereus VD078]
gi|401295414|gb|EJS01038.1| GTPase Der [Bacillus cereus VDM022]
gi|401304039|gb|EJS09597.1| GTPase Der [Bacillus cereus VDM034]
gi|401307800|gb|EJS13225.1| GTPase Der [Bacillus cereus VDM062]
gi|402428048|gb|EJV60146.1| GTPase Der [Bacillus cereus BAG6O-2]
gi|402438598|gb|EJV70607.1| GTPase Der [Bacillus cereus BtB2-4]
gi|402456715|gb|EJV88488.1| GTPase Der [Bacillus cereus HuA2-1]
Length = 436
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 193/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D PG+TRDR+Y W HEF ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGITRDRIYSAGEWLNHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PFLTQ----------IRQQAEVAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ K I+LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 DGVTAADEEVAKILYRS--KKPIVLAVNKVDNPDMR-SDIYDFYALGFGEPFPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + K+E E+ ++E +++GRPNVGKSS++NAL+G++R IVS I
Sbjct: 151 GLGDLLDEAANHFPKIE--EEAYDDET--IRFSLIGRPNVGKSSLVNALLGQERVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT ++ + Q + +IDTAG+RK+ + S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAVDTPYS-KDDQDYVIIDTAGMRKKGKVYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N L+G R IV + G TRD + + +++++DT G+
Sbjct: 177 RFSLIGRPNVGKSSLVNALLGQERVIVSNIAGTTRDAVDTPYSKDDQDYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++DG+
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D++IA + + + +I+ VNK ++ +K
Sbjct: 270 GIIEQDKKIAGYAHDS--GRAVIIVVNKWDAVKK 301
>gi|449892282|ref|ZP_21788382.1| GTP-binding protein EngA [Streptococcus mutans SF12]
gi|449256244|gb|EMC54075.1| GTP-binding protein EngA [Streptococcus mutans SF12]
Length = 436
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 186/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYIKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILAVNK ++P + +F++LG P P+S+ G
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMR-SAIYDFYALGLGDPYPVSSAHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVDNLPA-----EAQEESSDIIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD+V
Sbjct: 205 VAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDIV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|227510314|ref|ZP_03940363.1| GTP-binding protein EngA [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227189966|gb|EEI70033.1| GTP-binding protein EngA [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 435
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 135/313 (43%), Positives = 191/313 (61%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P VA +GRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W +EF ++DTGG
Sbjct: 3 MPTVAFIGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYTHAEWLANEFAMIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T+ I+ QA AIEE+ VI+F+V
Sbjct: 61 ------------------IQISDAPFNTQ----------IKNQAEIAIEEADVIVFIVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ GLT+ DE++A L ++ DK ++LAVNK ++P + +F++LGF P+PIS + G
Sbjct: 93 KEGLTSDDEQVAKILYRS--DKPVVLAVNKADNP-DAREDIYDFYALGFGDPMPISGVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + + K G ++ ++ R +I+GRPNVGKSS++NA++GE+R IVS
Sbjct: 150 TGIGDLLDKIVEKFPKETG--NVPNDDIRF---SIIGRPNVGKSSLVNAILGENRVIVSD 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT F + KF ++DTAGIRKR + + TE SV RA +AI +SDV+
Sbjct: 205 VAGTTRDAIDTRFEA-DNIKFTMVDTAGIRKRGKVYEN---TERYSVMRAMKAIDQSDVI 260
Query: 462 ALVIEAMACITEQ 474
VI A I EQ
Sbjct: 261 LFVINAEEGIREQ 273
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 89/187 (47%), Gaps = 38/187 (20%)
Query: 156 GNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFML 215
GNVP + R +I+GRPNVGKS+L N ++G NR IV D G TRD + R +F +
Sbjct: 168 GNVPNDDI-RFSIIGRPNVGKSSLVNAILGENRVIVSDVAGTTRDAIDTRFEADNIKFTM 226
Query: 216 VDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCV 275
VDT G+ K N T +V R A AI++S V
Sbjct: 227 VDTAGIRKRGKVYEN-------------------TERYSVMR--------AMKAIDQSDV 259
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG--------IMQVSEFW 327
I+F+++ + G+ D+++A + + K II VNK + +K + +EF
Sbjct: 260 ILFVINAEEGIREQDKKVAGYAHE--AGKAIITVVNKWDMLKKTNHTQQDFETLIRNEFQ 317
Query: 328 SLGFSPL 334
+ +SP+
Sbjct: 318 YMAYSPI 324
>gi|422746302|ref|ZP_16800235.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320140353|gb|EFW32209.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus MRSA131]
Length = 436
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEAYVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V S G E+ + ++I+GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GLGDLLDAVVSHF----GEEEEDPYDEDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
>gi|357638435|ref|ZP_09136308.1| ribosome-associated GTPase EngA [Streptococcus urinalis 2285-97]
gi|418417182|ref|ZP_12990380.1| GTPase Der [Streptococcus urinalis FB127-CNA-2]
gi|357586889|gb|EHJ56297.1| ribosome-associated GTPase EngA [Streptococcus urinalis 2285-97]
gi|410873238|gb|EKS21174.1| GTPase Der [Streptococcus urinalis FB127-CNA-2]
Length = 436
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 185/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRVAGERISIVEDVEGVTRDRIYTMGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAQIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L + K +ILAVNK ++P + +F+SLG P +S++ G
Sbjct: 93 KEGVTDADEYVSKMLYRT--QKPVILAVNKVDNPEMR-NDIYDFYSLGLGDPFALSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG+LLD + + L E+ ++ I +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDLLDAIVANLP-----EEAEDDNPDIIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDAIDT FT EGQ++ +IDTAG+RK + + TE SV R+ RAI RSDVV
Sbjct: 205 IAGTTRDAIDTHFTDKEGQEYLMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDRSDVV 261
Query: 462 ALVIEAMACITE 473
LVI A I E
Sbjct: 262 LLVINAEEGIRE 273
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 45/213 (21%)
Query: 155 IGNVPEHL------LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
+ N+PE + + +++GRPNVGKS+L N ++G +R I G TRD +
Sbjct: 160 VANLPEEAEDDNPDIIKFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTHFTD 219
Query: 209 GE-HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQAT 267
E E++++DT G+ K N T + +V R +
Sbjct: 220 KEGQEYLMIDTAGMRKSGKVYEN-------------------TEKYSVMR--------SM 252
Query: 268 AAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--- 324
AI+ S V++ +++ + G+ D+ IA + K II+ VNK ++ K VS
Sbjct: 253 RAIDRSDVVLLVINAEEGIREYDKRIAGFAHD--AGKGIIIVVNKWDTLAKDNRTVSKWE 310
Query: 325 -----EFWSLGFSPLP-ISAISGTGTGELLDLV 351
+F L ++P+ +SA++ +L +++
Sbjct: 311 TVIRDQFQFLAYAPIVFVSAVTKQRLHKLPEMI 343
>gi|315641243|ref|ZP_07896320.1| ribosome-associated GTPase EngA [Enterococcus italicus DSM 15952]
gi|315483010|gb|EFU73529.1| ribosome-associated GTPase EngA [Enterococcus italicus DSM 15952]
Length = 442
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 181/312 (58%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F ++DTGG+
Sbjct: 10 PTIAIVGRPNVGKSTVFNRIAGERISIVEDTPGVTRDRIYATGEWLGKDFSIIDTGGI-- 67
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S ME I+ QA AI+E+ VI+F+ +
Sbjct: 68 -DLSDEPFMEQ---------------------------IKHQAEIAIDEADVIVFVTSAR 99
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE +A L ++ K +ILAVNK ++P ++ EF+SLG P PIS G
Sbjct: 100 EGITDADESVAHLLYRS--KKPVILAVNKVDNPEMR-AEIYEFYSLGLGEPYPISGSHGL 156
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD ED EE++ +++GRPNVGKSS++NA++GEDR IVS +
Sbjct: 157 GLGDVLDEAVKHFG-----EDTEEEDDSTIRFSLIGRPNVGKSSLINAILGEDRVIVSDV 211
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT FT GQ+F +IDTAG+RKR + S TE SV RA RAI RSDVV
Sbjct: 212 EGTTRDAIDTHFTSESGQEFTMIDTAGMRKRGKVYES---TEKYSVMRAMRAIERSDVVL 268
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 269 VVLNADEGIREQ 280
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 41/200 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
R +++GRPNVGKS+L N ++G +R IV D G TRD + F E EF ++DT G+
Sbjct: 182 RFSLIGRPNVGKSSLINAILGEDRVIVSDVEGTTRDAI-DTHFTSESGQEFTMIDTAGM- 239
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + E +T + +V R A AIE S V++ +++
Sbjct: 240 ---RKRGKVYE---------------STEKYSVMR--------AMRAIERSDVVLVVLNA 273
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP- 333
G+ D++IA + + + II+ VNK + +K + EF L ++P
Sbjct: 274 DEGIREQDKKIAGYAHEE--GRGIIIIVNKWDLVKKDTNTMRDFEKEIREEFQYLDYAPI 331
Query: 334 LPISAISGTGTGELLDLVCS 353
L +SA++ +L +++ S
Sbjct: 332 LFVSAMTKQRLNQLPEMIES 351
>gi|297584434|ref|YP_003700214.1| ribosome-associated GTPase EngA [Bacillus selenitireducens MLS10]
gi|297142891|gb|ADH99648.1| ribosome-associated GTPase EngA [Bacillus selenitireducens MLS10]
Length = 446
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 191/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS LFNR+VG +IV D+PGVTRDR+Y + W HEF ++DTGG+
Sbjct: 12 PVLAIVGRPNVGKSTLFNRVVGERISIVEDKPGVTRDRIYSSAEWLTHEFFIIDTGGI-- 69
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E + + + QA AI+E+ VI F+V+G+
Sbjct: 70 ----------------------------EISDEPLLEQMRYQAELAIDEADVICFVVNGR 101
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ K I+LAVNK + P ++ EF+SLG P P+S G
Sbjct: 102 DGMTAADEEVAQILHRS--KKPIVLAVNKIDDPSM-FERLYEFYSLGVGDPHPVSGTHGL 158
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + + +G +D + R+ +++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 159 GLGDLLDTAAASFPQNQG-DDYHPDTVRM---SLIGRPNVGKSSMVNAILGEERVIVSDI 214
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT FT +G+ + +IDTAG+RKR + TTE SV RA +AI RSDVV
Sbjct: 215 AGTTRDAIDTSFT-KDGKDYVVIDTAGMRKRGKVY---ETTEKYSVLRALKAIERSDVVL 270
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 271 VVLDGEEGIIEQ 282
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++++GRPNVGKS++ N ++G R IV D G TRD + +++++DT G+
Sbjct: 185 RMSLIGRPNVGKSSMVNAILGEERVIVSDIAGTTRDAIDTSFTKDGKDYVVIDTAGM--- 241
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIE S V++ ++DG+
Sbjct: 242 -RKRGKVYE---------------TTEKYSVLR--------ALKAIERSDVVLVVLDGEE 277
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQV------SEFWSLGFSPL-P 335
G+ D++IA + + + I++ VNK ++ K MQ EF L ++P+
Sbjct: 278 GIIEQDKKIAGYAHE--AGRAIVIVVNKWDAVEKDDKTMQKFEEKIRHEFVFLDYAPIVY 335
Query: 336 ISAISGTGTGELLDLV 351
+SA++ LL +V
Sbjct: 336 VSALTKRRMQTLLPVV 351
>gi|241889489|ref|ZP_04776788.1| ribosome-associated GTPase EngA [Gemella haemolysans ATCC 10379]
gi|241863796|gb|EER68179.1| ribosome-associated GTPase EngA [Gemella haemolysans ATCC 10379]
Length = 435
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 186/312 (59%), Gaps = 43/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS +FN+++G +IV D GVTRDR+Y ++ W + F ++DTGG
Sbjct: 4 PTVAIIGRPNVGKSTIFNKIIGDRLSIVEDVAGVTRDRIYSKAEWLNYSFFMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I +E P + I QA AI+E+ VIIFL +G+
Sbjct: 61 -----------------IELEDTPFQKQ----------IRAQAELAIDEADVIIFLTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ DEE+A L K DK ++LAVNK ++ M + +F+SLGF P PIS G
Sbjct: 94 DGVTSDDEEVARLLYKT--DKPVVLAVNKIDNFDMNHM-IYDFYSLGFGDPFPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD VC K +E EEE+ +++GRPNVGKSS++N ++GE+R I S I
Sbjct: 151 GIGDLLDEVCKNFKVLEE-----EEEDDKIRFSLIGRPNVGKSSLINTILGEERVIASDI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT+F G ++ +IDTAGIRKR + S E SV R+ +AI RSDVV
Sbjct: 206 AGTTRDAIDTDFK-HNGDEYVVIDTAGIRKRGKVYES---CEKYSVLRSLKAIERSDVVL 261
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 262 VVLNAEEGIIEQ 273
>gi|387780574|ref|YP_005755372.1| putative GTPase [Staphylococcus aureus subsp. aureus LGA251]
gi|344177676|emb|CCC88154.1| putative GTPase [Staphylococcus aureus subsp. aureus LGA251]
Length = 436
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKTVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V S G E+ + ++I+GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GLGDLLDAVVSHF----GEEEEDPYDEDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
>gi|87161650|ref|YP_494061.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|161509642|ref|YP_001575301.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|294848438|ref|ZP_06789184.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9754]
gi|415687446|ref|ZP_11451321.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
CGS01]
gi|418641890|ref|ZP_13204095.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-24]
gi|418646878|ref|ZP_13208969.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-88]
gi|418650574|ref|ZP_13212592.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-91]
gi|418659736|ref|ZP_13221395.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-111]
gi|419773578|ref|ZP_14299579.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CO-23]
gi|422743960|ref|ZP_16797938.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus MRSA177]
gi|123485886|sp|Q2FGW7.1|DER_STAA3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|189037166|sp|A8Z454.1|DER_STAAT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|87127624|gb|ABD22138.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|160368451|gb|ABX29422.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|294824464|gb|EFG40887.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9754]
gi|315197778|gb|EFU28112.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
CGS01]
gi|320142720|gb|EFW34523.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus MRSA177]
gi|375018345|gb|EHS11925.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-24]
gi|375027860|gb|EHS21218.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-91]
gi|375031896|gb|EHS25157.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-88]
gi|375034383|gb|EHS27547.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-111]
gi|383972638|gb|EID88669.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CO-23]
Length = 436
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEAYVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V S G E+ + ++I+GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GLGDLLDAVVSHF----GEEEEDPYDEDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
>gi|121535817|ref|ZP_01667617.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1]
gi|121305589|gb|EAX46531.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1]
Length = 440
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 192/312 (61%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN + +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNFIAKKRVSIVEDLPGVTRDRIYMDAEWLGREFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I TT + I ATR QA AIEE+ VIIF+VDG+
Sbjct: 62 ------------EIETT---DRILAATRH------------QAQLAIEEADVIIFVVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADEE+A LR K ++LAVNK +SP K V EF++LG P+ ISA +
Sbjct: 95 TGITTADEEVAAMLRSTR--KPVVLAVNKIDSP-KDEPAVYEFYNLGLGDPIAISATNAL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V L + TED EE++ + +A +GRPNVGKSS++NAL+GE+R IVS I
Sbjct: 152 SIGDLLDRVIELLPQ---TED-AEEDDDVIKVAFIGRPNVGKSSLVNALLGEERVIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F +G KF LIDTAG+R++A I E SV R+ RA+ R+DVV
Sbjct: 208 PGTTRDAIDTYFE-KDGTKFILIDTAGMRRKARI---NQPVERYSVIRSLRAVERADVVL 263
Query: 463 LVIEAMACITEQ 474
+VI+A+ +TEQ
Sbjct: 264 VVIDAVDGVTEQ 275
>gi|16801117|ref|NP_471385.1| GTP-binding protein EngA [Listeria innocua Clip11262]
gi|423098843|ref|ZP_17086551.1| ribosome biogenesis GTPase Der [Listeria innocua ATCC 33091]
gi|26006727|sp|Q92A71.1|DER_LISIN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|16414552|emb|CAC97281.1| lin2051 [Listeria innocua Clip11262]
gi|370794670|gb|EHN62433.1| ribosome biogenesis GTPase Der [Listeria innocua ATCC 33091]
Length = 436
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
DL+ + I QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------DLSDEPFL------------------EQIRAQAEIAIDEADVIIFITNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K I+LA+NK ++P Q+ +F+SLGF P PIS G
Sbjct: 94 EGVTDADEQVAKILYRS--NKPIVLAINKVDNPEMR-DQIYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + K E E + +++GRPNVGKSSILNAL+GEDR IVS I
Sbjct: 151 GLGDMLDAVRAHFPKEEEEE----YPDETVKFSLIGRPNVGKSSILNALLGEDRVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT +T +GQ + +IDTAG+RKR + S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAIDTTYTF-DGQDYVMIDTAGMRKRGKVYES---TEKYSVLRAMRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+VI A I EQ
Sbjct: 263 VVINAEEGIREQ 274
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS++ N L+G +R IV D G TRD + + +++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSILNALLGEDRVIVSDIAGTTRDAIDTTYTFDGQDYVMIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ +++ +
Sbjct: 234 -RKRGKVYE---------------STEKYSVLR--------AMRAIERSDVVLVVINAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + II+ VNK ++ K ++ +F L ++P+
Sbjct: 270 GIREQDKRIAGYAHD--AGRAIIIVVNKWDAINKDEKTINVWTEDIREQFQFLSYAPI 325
>gi|421859201|ref|ZP_16291440.1| predicted GTPase [Paenibacillus popilliae ATCC 14706]
gi|410831266|dbj|GAC41877.1| predicted GTPase [Paenibacillus popilliae ATCC 14706]
Length = 440
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 190/312 (60%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR++G AIV D+PGVTRDR+YG W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRVIGDRLAIVEDKPGVTRDRIYGTGEWNGKPFSIIDTGGIEV 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + M I QA AIEE+ VI+F+ + +
Sbjct: 64 YGEDE-----------------------------MLRSIRVQAELAIEEADVIVFMCEAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+G+T ADEE+A+ L ++ K ++LA+NK ++ ++ + V EF+SLGF P+PIS GT
Sbjct: 95 SGVTQADEEVAEILFRS--AKPVVLAINKVDNLQR-MDDVYEFYSLGFGDPVPISGSHGT 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + E + + +A++GRPNVGKSS++NA++GEDR IVS I
Sbjct: 152 GLGDLLDEVVHRFPETTEE----EYDEDVIRVALIGRPNVGKSSLVNAILGEDRVIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F +GQ+F LIDTAG+RKR + TTE SV R+ +AI R+DVV
Sbjct: 208 AGTTRDAIDTPFE-KDGQRFVLIDTAGMRKRGKVY---ETTEKYSVMRSMKAIERADVVL 263
Query: 463 LVIEAMACITEQ 474
+VI I EQ
Sbjct: 264 VVINGEEGIIEQ 275
>gi|449897548|ref|ZP_21790062.1| GTP-binding protein EngA [Streptococcus mutans R221]
gi|449261203|gb|EMC58684.1| GTP-binding protein EngA [Streptococcus mutans R221]
Length = 436
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 185/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILAVNK ++P + +F++LG P P+S+ G
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMR-STIYDFYALGLGDPYPVSSAHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVDNLPT-----EAQEENSDIIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV R RAI RSD+V
Sbjct: 205 VAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRTMRAIDRSDIV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|406838676|ref|ZP_11098270.1| GTP-binding protein Der [Lactobacillus vini DSM 20605]
Length = 436
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y S W +F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYTHSEWLGQKFSLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+G E P T+ I+ QA AI+E+ VI+ +V +
Sbjct: 62 ----------------EMGTE--PFLTQ----------IKEQAEIAIDEADVIVLIVSVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L + DK +I+AVNK ++P + +F+SLGF P+PIS + G
Sbjct: 94 EGVTEADEKVAQILYQT--DKPVIVAVNKVDNPELR-ADIYDFYSLGFGDPIPISGVHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LL+ VC K E +E + I +++GRPNVGKSS++NA++G++R IVS I
Sbjct: 151 GIGDLLEKVCQSFPK----EKHLELDQSI-KFSLIGRPNVGKSSLVNAILGQNRVIVSKI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F G+ F +IDTAGIRK+ + + TE SV RA RAI RSDVV
Sbjct: 206 EGTTRDAIDTPFKTENGECFTVIDTAGIRKKGKVYEN---TEKYSVLRALRAIDRSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V++A I EQ
Sbjct: 263 VVLDAETGIREQ 274
>gi|336064889|ref|YP_004559748.1| GTP-binding protein [Streptococcus pasteurianus ATCC 43144]
gi|334283089|dbj|BAK30662.1| GTP-binding protein [Streptococcus pasteurianus ATCC 43144]
Length = 436
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 186/315 (59%), Gaps = 48/315 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSKILYRT--NKPVILVVNKVDNPEMR-SDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAI---AIVGRPNVGKSSILNALVGEDRTI 398
GTG++LD + L VEEE+ P I +++GRPNVGKSS++NA++GE+R I
Sbjct: 150 IGTGDVLDAIVENLP--------VEEEDENPDIIKFSLIGRPNVGKSSLINAILGEERVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SPI+GTTRDAIDT FT EGQ++ +IDTAG+RK + + TE SV R+ RAI RS
Sbjct: 202 ASPIAGTTRDAIDTNFTDSEGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDRS 258
Query: 459 DVVALVIEAMACITE 473
D+V +VI A I E
Sbjct: 259 DIVLMVINAEEGIRE 273
>gi|422416458|ref|ZP_16493415.1| ribosome-associated GTPase EngA [Listeria innocua FSL J1-023]
gi|313623121|gb|EFR93388.1| ribosome-associated GTPase EngA [Listeria innocua FSL J1-023]
Length = 436
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
DL+ + I QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------DLSDEPFL------------------EQIRAQAEIAIDEADVIIFITNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K I+LA+NK ++P Q+ +F+SLGF P PIS G
Sbjct: 94 EGVTDADEQVAKILYRS--NKPIVLAINKVDNPEMR-DQIYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + K E E + +++GRPNVGKSSILNAL+GEDR IVS I
Sbjct: 151 GLGDMLDAVRAHFPKEEEEE----YPDETVKFSLIGRPNVGKSSILNALLGEDRVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT +T +GQ + +IDTAG+RKR + S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAIDTTYTF-DGQDYVMIDTAGMRKRGKVYES---TEKYSVLRAMRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+VI A I EQ
Sbjct: 263 VVINAEEGIREQ 274
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS++ N L+G +R IV D G TRD + + +++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSILNALLGEDRVIVSDIAGTTRDAIDTTYTFDGQDYVMIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ +++ +
Sbjct: 234 -RKRGKVYE---------------STEKYSVLR--------AMRAIERSDVVLVVINAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + II+ VNK ++ K ++ +F L ++P+
Sbjct: 270 GIREQDKRIAGYAHD--AGRAIIIVVNKWDAINKDEKTINVWTEDIREQFQFLSYAPI 325
>gi|374605722|ref|ZP_09678640.1| GTP-binding protein Der [Paenibacillus dendritiformis C454]
gi|374388717|gb|EHQ60121.1| GTP-binding protein Der [Paenibacillus dendritiformis C454]
Length = 440
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 190/312 (60%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR++G AIV D+PGVTRDR+YG W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRVIGDRLAIVEDKPGVTRDRIYGTGEWNGKPFNVIDTGGIEV 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + M I QA AIEE+ VI+F+ + +
Sbjct: 64 YGEDE-----------------------------MLRSIRVQAELAIEEADVIVFMCEAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+G+T ADEE+A+ L ++ K ++LA+NK ++ ++ + V EF+SLGF P+PIS GT
Sbjct: 95 SGVTQADEEVAEILFRS--GKPVVLAINKVDNLQR-MDDVYEFYSLGFGDPVPISGSHGT 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + E + + +A++GRPNVGKSS++NA++GEDR IVS I
Sbjct: 152 GLGDLLDEVVHRFPETTEE----EYDEDVIRVALIGRPNVGKSSLVNAILGEDRVIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F +GQ+F LIDTAG+RKR + TTE SV R+ +AI R+DVV
Sbjct: 208 AGTTRDAIDTPFE-KDGQRFVLIDTAGMRKRGKVY---ETTEKYSVMRSMKAIERADVVL 263
Query: 463 LVIEAMACITEQ 474
+VI I EQ
Sbjct: 264 VVINGEEGIIEQ 275
>gi|325978979|ref|YP_004288695.1| GTP-binding protein EngA [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325178907|emb|CBZ48951.1| GTP-binding protein EngA [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 436
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 186/315 (59%), Gaps = 48/315 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSKILYRT--NKPVILVVNKVDNPEMR-SDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAI---AIVGRPNVGKSSILNALVGEDRTI 398
GTG++LD + L VEEE+ P I +++GRPNVGKSS++NA++GE+R I
Sbjct: 150 IGTGDVLDAIVENLP--------VEEEDENPDIIKFSLIGRPNVGKSSLINAILGEERVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SPI+GTTRDAIDT FT EGQ++ +IDTAG+RK + + TE SV R+ RAI RS
Sbjct: 202 ASPIAGTTRDAIDTNFTDSEGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDRS 258
Query: 459 DVVALVIEAMACITE 473
D+V +VI A I E
Sbjct: 259 DIVLMVINAEEGIRE 273
>gi|288906012|ref|YP_003431234.1| GTP-binding protein [Streptococcus gallolyticus UCN34]
gi|386338454|ref|YP_006034623.1| GTP-binding protein [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
gi|288732738|emb|CBI14312.1| putative GTP-binding protein [Streptococcus gallolyticus UCN34]
gi|334281090|dbj|BAK28664.1| GTP-binding protein [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
Length = 436
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 186/315 (59%), Gaps = 48/315 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSKILYRT--NKPVILVVNKVDNPEMR-SDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAI---AIVGRPNVGKSSILNALVGEDRTI 398
GTG++LD + L VEEE+ P I +++GRPNVGKSS++NA++GE+R I
Sbjct: 150 IGTGDVLDAIVENLP--------VEEEDENPDIIKFSLIGRPNVGKSSLINAILGEERVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SPI+GTTRDAIDT FT EGQ++ +IDTAG+RK + + TE SV R+ RAI RS
Sbjct: 202 ASPIAGTTRDAIDTNFTDSEGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDRS 258
Query: 459 DVVALVIEAMACITE 473
D+V +VI A I E
Sbjct: 259 DIVLMVINAEEGIRE 273
>gi|357235868|ref|ZP_09123211.1| ribosome-associated GTPase EngA [Streptococcus criceti HS-6]
gi|356883850|gb|EHI74050.1| ribosome-associated GTPase EngA [Streptococcus criceti HS-6]
Length = 436
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 133/309 (43%), Positives = 187/309 (60%), Gaps = 48/309 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ ES VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTESDVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILAVNK ++P + +F++LG P P+S++ G
Sbjct: 93 KEGVTDADEYVAKILYRTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGDPYPLSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAI---AIVGRPNVGKSSILNALVGEDRTI 398
GTG++LD + L VEE++ P I +++GRPNVGKSS++NA++GE+R I
Sbjct: 150 IGTGDILDAIVESLP--------VEEDDDNPDIIKFSLIGRPNVGKSSLINAMLGEERVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SP++GTTRDAIDT+F EGQ++ +IDTAG+RK + + TE S+ R+ RAI RS
Sbjct: 202 ASPVAGTTRDAIDTDFVDDEGQEYTMIDTAGMRKSGKVYEN---TEKYSIMRSMRAIDRS 258
Query: 459 DVVALVIEA 467
DVV +VI A
Sbjct: 259 DVVLMVINA 267
>gi|392948946|ref|ZP_10314546.1| GTP-binding protein EngA [Lactobacillus pentosus KCA1]
gi|392435919|gb|EIW13843.1| GTP-binding protein EngA [Lactobacillus pentosus KCA1]
Length = 436
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 183/312 (58%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y S W EF L+DTGG
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYANSEWLGQEFSLIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I ++ P + I +QA AI+E+ VII+LV +
Sbjct: 61 -----------------IDIDDAPFIKQ----------ITQQAEIAIDEADVIIYLVSIK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE +A L ++ +K ++LAVNK ++P +V +F+SLGF P PIS G
Sbjct: 94 EGVTDADEHVAQILYRS--NKPVVLAVNKVDNPELR-SEVYDFYSLGFGDPYPISGAHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + G E+E +++GRPNVGKSSI+NAL+GE+R IVS +
Sbjct: 151 GLGDLLDAVIKNFPEKSG-----EDEPGTIRFSLIGRPNVGKSSIVNALLGEERVIVSDV 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT FT EG +F ++DTAGIRK+ + + TE SV RA +AI SDV
Sbjct: 206 AGTTRDAIDTAFTDEEGDRFVMVDTAGIRKKGKVYEN---TERYSVMRALKAIDNSDVAL 262
Query: 463 LVIEAMACITEQ 474
VI I EQ
Sbjct: 263 FVINGEEGIREQ 274
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 39/202 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH--EFMLVDTGGVL 222
R +++GRPNVGKS++ N L+G R IV D G TRD + +F E F++VDT G+
Sbjct: 176 RFSLIGRPNVGKSSIVNALLGEERVIVSDVAGTTRDAI-DTAFTDEEGDRFVMVDTAGIR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T +V R A AI+ S V +F+++G
Sbjct: 235 KKGKVYEN-------------------TERYSVMR--------ALKAIDNSDVALFVING 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------LGFSPLPI 336
+ G+ D+ +A + + K I++ VNK ++ +K + EF + + S PI
Sbjct: 268 EEGIREQDKRVAGYAHE--AGKAIVIVVNKWDTVKKDNHTMQEFEAYIRDQFVYLSYAPI 325
Query: 337 SAISGTGTGELLDLVCSELKKV 358
+S T + LD + + +KKV
Sbjct: 326 IFVSAK-TNQRLDQLPALIKKV 346
>gi|306832031|ref|ZP_07465186.1| ribosome-associated GTPase EngA [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304425957|gb|EFM29074.1| ribosome-associated GTPase EngA [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 436
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 186/315 (59%), Gaps = 48/315 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSKILYRT--NKPVILVVNKVDNPEMR-SDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAI---AIVGRPNVGKSSILNALVGEDRTI 398
GTG++LD + L VEEE+ P I +++GRPNVGKSS++NA++GE+R I
Sbjct: 150 IGTGDVLDAIVENLP--------VEEEDENPDIIKFSLIGRPNVGKSSLINAILGEERVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SPI+GTTRDAIDT FT EGQ++ +IDTAG+RK + + TE SV R+ RAI RS
Sbjct: 202 ASPIAGTTRDAIDTNFTDSEGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDRS 258
Query: 459 DVVALVIEAMACITE 473
D+V +VI A I E
Sbjct: 259 DIVLMVINAEEGIRE 273
>gi|354807555|ref|ZP_09041019.1| ribosome-associated GTPase EngA [Lactobacillus curvatus CRL 705]
gi|354513945|gb|EHE85928.1| ribosome-associated GTPase EngA [Lactobacillus curvatus CRL 705]
Length = 436
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 185/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y S W HEF L+DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYTTSEWLGHEFSLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E + A I++QA AI+E+ VIIFLV +
Sbjct: 62 ----------------------------EISDAPFMEQIKQQAEIAIDEADVIIFLVSAR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE +A L + DK I+L VNK ++P + + +F+SLGF P+ +S G
Sbjct: 94 EGVTDADERVAQILYR--ADKPILLGVNKADNPEQR-QDIFDFYSLGFGEPIAVSGAHGQ 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD ++ + E+ + +++GRPNVGKSS++NA++ EDR IVS I
Sbjct: 151 GLGDLLDAAVAKFPAEDDEEEDDSIK-----FSLIGRPNVGKSSLVNAMLKEDRVIVSQI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT+FT + Q+F +IDTAGIRKR + + TE +V RA RAI RSDVV
Sbjct: 206 EGTTRDAIDTKFTAEDNQEFTMIDTAGIRKRGKVYEN---TEKYAVMRALRAIDRSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIREQ 274
>gi|172057814|ref|YP_001814274.1| GTP-binding protein EngA [Exiguobacterium sibiricum 255-15]
gi|171990335|gb|ACB61257.1| small GTP-binding protein [Exiguobacterium sibiricum 255-15]
Length = 436
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 198/314 (63%), Gaps = 44/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P VAIVGRPN+GKS +FNR++G +IV D+PGVTRDR+YG W F L+DTGG+
Sbjct: 3 IPVVAIVGRPNIGKSTIFNRVIGDRVSIVEDKPGVTRDRIYGTGEWLNRHFHLIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+G E PL M+ QA AI+E+ VIIF+V+G
Sbjct: 62 -----------------EVGDE--PLL----------QMMRHQAELAIDEADVIIFMVNG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSEFWSLGFSPL-PISAIS 340
+ G+TAADEE+A+ L ++ +K +++AVNK ++ + +M EF+SLGF L PIS
Sbjct: 93 REGITAADEEVANMLFRS--NKPVVVAVNKVDNFEMRDLMY--EFYSLGFGDLYPISGTH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD V L+ ED+ +E+ I A+VGRPNVGKSS+ N+++GE+R IVS
Sbjct: 149 GLGLGDMLDRV---LELAPDKEDIEYDEDTI-KFALVGRPNVGKSSMTNSILGEERVIVS 204
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I+GTTRDAIDT F+ E Q++ +IDTAG+RKR + S TE SV RA +AI R+DV
Sbjct: 205 SIAGTTRDAIDTPFSRDE-QEYVIIDTAGMRKRGKVYES---TERFSVMRAQKAIERADV 260
Query: 461 VALVIEAMACITEQ 474
V +V++ I EQ
Sbjct: 261 VCVVLDGEEGIIEQ 274
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ A+VGRPNVGKS++ N ++G R IV G TRD + E E++++DT G+
Sbjct: 177 KFALVGRPNVGKSSMTNSILGEERVIVSSIAGTTRDAIDTPFSRDEQEYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T +V R A AIE + V+ ++DG+
Sbjct: 234 -RKRGKVYE---------------STERFSVMR--------AQKAIERADVVCVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+++A + + + I++ VNK ++ K
Sbjct: 270 GIIEQDKKVAGYAHE--AGRAIVIVVNKWDAVEK 301
>gi|239631541|ref|ZP_04674572.1| GTP-binding protein EngA [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|239526006|gb|EEQ65007.1| GTP-binding protein EngA [Lactobacillus paracasei subsp. paracasei
8700:2]
Length = 435
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 142/314 (45%), Positives = 193/314 (61%), Gaps = 43/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AIVGRPNVGKS +FNR++G +IV D PGVTRDR+YG S W EF ++DTGG+
Sbjct: 2 VLPTLAIVGRPNVGKSTIFNRILGERVSIVEDTPGVTRDRIYGTSEWLGKEFAVIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
DL E +A+ I+ QA AI+E+ VI+FL D
Sbjct: 62 ------------DLG--------------DEPFLAQ----IKDQAEIAIDEADVILFLAD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
++G+T ADE +A L + K ++LAVNK ++P + + +F+SLGF P P+S
Sbjct: 92 IESGVTDADERVAQILYR--AKKPVVLAVNKVDNPERR-QDIYDFYSLGFGEPYPLSGTH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD V + +ED E++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GIGLGDVLDAVLAAFP----SEDKSVEDDSI-KFSLIGRPNVGKSSLVNAILGENRVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI GTTRDAIDT+F + + F +IDTAGIRKR + + TE +V RA RAI RSDV
Sbjct: 204 PIEGTTRDAIDTKFEAVD-ETFTMIDTAGIRKRGKVYEN---TEKYAVMRALRAIDRSDV 259
Query: 461 VALVIEAMACITEQ 474
V VI A I EQ
Sbjct: 260 VLFVINAEEGIREQ 273
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 29/165 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N ++G NR IV G TRD + + + F ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLVNAILGENRVIVSPIEGTTRDAIDTKFEAVDETFTMIDTAGIRKR 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + AV R A AI+ S V++F+++ +
Sbjct: 236 GKVYEN-------------------TEKYAVMR--------ALRAIDRSDVVLFVINAEE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL 329
G+ D+++A + + + II+ VNK ++ K + +F +L
Sbjct: 269 GIREQDKKVAGY--SHEAGRGIIIVVNKWDTVEKDNHTMKDFENL 311
>gi|449924353|ref|ZP_21799593.1| GTP-binding protein EngA [Streptococcus mutans 4SM1]
gi|449974093|ref|ZP_21815115.1| GTP-binding protein EngA [Streptococcus mutans 11VS1]
gi|450181614|ref|ZP_21887934.1| GTP-binding protein EngA [Streptococcus mutans 24]
gi|449162939|gb|EMB66058.1| GTP-binding protein EngA [Streptococcus mutans 4SM1]
gi|449178769|gb|EMB81012.1| GTP-binding protein EngA [Streptococcus mutans 11VS1]
gi|449246026|gb|EMC44342.1| GTP-binding protein EngA [Streptococcus mutans 24]
Length = 436
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 185/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ +T ADE +A L + + K IILAVNK ++P + +F++LG P P+S+ G
Sbjct: 93 KESITDADEYVAKILYRTH--KPIILAVNKVDNPEMR-SAIYDFYALGLGDPYPVSSAHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVDNLPT-----EAQEENSDIIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD+V
Sbjct: 205 VAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDIV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|418597205|ref|ZP_13160738.1| ribosome-associated GTPase EngA, partial [Staphylococcus aureus
subsp. aureus 21342]
gi|374395441|gb|EHQ66708.1| ribosome-associated GTPase EngA, partial [Staphylococcus aureus
subsp. aureus 21342]
Length = 366
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V S G E+ + ++I+GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GLGDLLDAVVSHF----GEEEEDPYDEDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
>gi|227535137|ref|ZP_03965186.1| GTP-binding protein engA [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|227187182|gb|EEI67249.1| GTP-binding protein engA [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
Length = 445
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 142/314 (45%), Positives = 193/314 (61%), Gaps = 43/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AIVGRPNVGKS +FNR++G +IV D PGVTRDR+YG S W EF ++DTGG+
Sbjct: 12 VLPTLAIVGRPNVGKSTIFNRILGERVSIVEDTPGVTRDRIYGTSEWLGKEFAVIDTGGI 71
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
DL E +A+ I+ QA AI+E+ VI+FL D
Sbjct: 72 ------------DLG--------------DEPFLAQ----IKDQAEIAIDEADVILFLAD 101
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
++G+T ADE +A L + K ++LAVNK ++P + + +F+SLGF P P+S
Sbjct: 102 IESGVTDADERVAQILYR--AKKPVVLAVNKVDNPERR-QDIYDFYSLGFGEPYPLSGTH 158
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD V + +ED E++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 159 GIGLGDVLDAVLAAFP----SEDKSVEDDSI-KFSLIGRPNVGKSSLVNAILGENRVIVS 213
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI GTTRDAIDT+F + + F +IDTAGIRKR + + TE +V RA RAI RSDV
Sbjct: 214 PIEGTTRDAIDTKFEAVD-ETFTMIDTAGIRKRGKVYEN---TEKYAVMRALRAIDRSDV 269
Query: 461 VALVIEAMACITEQ 474
V VI A I EQ
Sbjct: 270 VLFVINAEEGIREQ 283
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 29/165 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N ++G NR IV G TRD + + + F ++DT G+
Sbjct: 186 KFSLIGRPNVGKSSLVNAILGENRVIVSPIEGTTRDAIDTKFEAVDETFTMIDTAGIRKR 245
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + AV R A AI+ S V++F+++ +
Sbjct: 246 GKVYEN-------------------TEKYAVMR--------ALRAIDRSDVVLFVINAEE 278
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL 329
G+ D+++A + + + II+ VNK ++ K + +F +L
Sbjct: 279 GIREQDKKVAGYAHE--AGRGIIIVVNKWDTVEKDNHTMKDFENL 321
>gi|398311230|ref|ZP_10514704.1| GTP-binding protein Der [Bacillus mojavensis RO-H-1]
Length = 436
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I QA A++E+ VIIF+V+G+
Sbjct: 62 ----------------DIGDE--PFLTQ----------IREQAEIAMDEADVIIFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L + K ++LAVNK ++ + +F+SLGF P P+S G
Sbjct: 94 EGVTAADEEVAKILYRT--KKPVVLAVNKLDNTEMR-ANIYDFYSLGFGEPYPVSGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD K + T+ ++ + ++GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GLGDLLDAAAEHFKNIPETK----YDDEVVQFCLIGRPNVGKSSLVNAILGEDRVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT FT + Q F ++DTAG+RK+ + TTE SV RA +AI RS+VVA
Sbjct: 207 AGTTRDAVDTTFTYNQ-QDFVIVDTAGMRKKGKVY---ETTEKYSVLRALKAIDRSEVVA 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 33/174 (18%)
Query: 157 NVPEHL----LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
N+PE + + ++GRPNVGKS+L N ++G +R IV + G TRD + + + +
Sbjct: 165 NIPETKYDDEVVQFCLIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAVDTTFTYNQQD 224
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F++VDT G+ + + + E T + +V R A AI+
Sbjct: 225 FVIVDTAGM----RKKGKVYE---------------TTEKYSVLR--------ALKAIDR 257
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
S V+ ++DG+ G+ D+ IA + + K +++ VNK ++ K + EF
Sbjct: 258 SEVVAVVLDGEEGIIEQDKRIAGYAHE--AGKAVVIVVNKWDAVDKDESTMKEF 309
>gi|297591047|ref|ZP_06949685.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus MN8]
gi|297575933|gb|EFH94649.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus MN8]
Length = 436
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGAHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V S G E+ + ++I+GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GLGDLLDAVVSHF----GEEEEDPYDEDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
>gi|320547399|ref|ZP_08041687.1| ribosome-associated GTPase EngA [Streptococcus equinus ATCC 9812]
gi|320447944|gb|EFW88699.1| ribosome-associated GTPase EngA [Streptococcus equinus ATCC 9812]
Length = 436
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 186/315 (59%), Gaps = 48/315 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSKILYRT--NKPVILVVNKVDNPEMR-SDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAI---AIVGRPNVGKSSILNALVGEDRTI 398
GTG++LD + L VEEE+ P I +++GRPNVGKSS++NA++GE+R I
Sbjct: 150 IGTGDVLDAIVENLP--------VEEEDENPDIIKFSLIGRPNVGKSSLINAILGEERVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SPI+GTTRDAIDT FT EGQ++ +IDTAG+RK + + TE SV R+ RAI RS
Sbjct: 202 ASPIAGTTRDAIDTNFTDSEGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDRS 258
Query: 459 DVVALVIEAMACITE 473
D+V +VI A I E
Sbjct: 259 DIVLMVINAEEGIRE 273
>gi|417999071|ref|ZP_12639284.1| GTP-binding protein [Lactobacillus casei T71499]
gi|410540011|gb|EKQ14533.1| GTP-binding protein [Lactobacillus casei T71499]
Length = 435
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 192/314 (61%), Gaps = 43/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AIVGRPNVGKS +FNR++G +IV D PGVTRDR+YG S W EF ++DTGG+
Sbjct: 2 VLPTLAIVGRPNVGKSTIFNRILGERVSIVEDTPGVTRDRIYGTSEWLGKEFAVIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+G E P + I+ QA AI+E+ VI+FL D
Sbjct: 62 ------------------DLGDE--PFL----------AQIKDQAEIAIDEADVILFLAD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
++G+T ADE +A L + K ++LAVNK ++P + + +F+SLGF P P+S
Sbjct: 92 IESGVTDADERVAQILYR--AKKPVVLAVNKVDNPERR-QDIYDFYSLGFGEPYPLSGTH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD V + +ED E++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GIGLGDVLDAVLAAFP----SEDKSVEDDSI-KFSLIGRPNVGKSSLVNAILGENRVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI GTTRDAIDT+F + + F +IDTAGIRKR + + TE +V RA RAI RSDV
Sbjct: 204 PIEGTTRDAIDTKFEAVD-ETFTMIDTAGIRKRGKVYEN---TEKYAVMRALRAIDRSDV 259
Query: 461 VALVIEAMACITEQ 474
V VI A I EQ
Sbjct: 260 VLFVINAEEGIREQ 273
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 29/165 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N ++G NR IV G TRD + + + F ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLVNAILGENRVIVSPIEGTTRDAIDTKFEAVDETFTMIDTAGIRKR 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + AV R A AI+ S V++F+++ +
Sbjct: 236 GKVYEN-------------------TEKYAVMR--------ALRAIDRSDVVLFVINAEE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL 329
G+ D+++A + + + II+ VNK ++ K + +F +L
Sbjct: 269 GIREQDKKVAGYAHE--AGRGIIIVVNKWDTVEKDNHTMKDFENL 311
>gi|261406031|ref|YP_003242272.1| GTP-binding protein EngA [Paenibacillus sp. Y412MC10]
gi|329929734|ref|ZP_08283410.1| ribosome biogenesis GTPase Der [Paenibacillus sp. HGF5]
gi|261282494|gb|ACX64465.1| ribosome-associated GTPase EngA [Paenibacillus sp. Y412MC10]
gi|328935712|gb|EGG32173.1| ribosome biogenesis GTPase Der [Paenibacillus sp. HGF5]
Length = 440
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 193/312 (61%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNRL+G AIV D+PG+TRDR+YG + W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRLIGDRLAIVEDKPGITRDRIYGSAEWNGKAFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I D I +I M QA AIEE+ VI+F+ D +
Sbjct: 62 ------EIDGDDMILKSIRM---------------------QAELAIEEADVIVFMCDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T +DEE+A L ++ K +IL+VNK ++ ++ + EF+SLGF P+ IS GT
Sbjct: 95 TGVTQSDEEVAQILFRS--GKPVILSVNKVDNLKRA-DDIYEFYSLGFGDPVGISGSHGT 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD+V L ++E E + + +A++GRPNVGKSS++NA++GE+R IVS +
Sbjct: 152 GIGDLLDVVVENLPELEDD----EYDEDVIRVALIGRPNVGKSSLVNAILGEERVIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F +GQ++ LIDTAG+RKR + TTE SV RA RAI R+DVV
Sbjct: 208 AGTTRDAIDTPFE-KDGQRYVLIDTAGMRKRGKVY---ETTEKYSVMRAMRAIERADVVL 263
Query: 463 LVIEAMACITEQ 474
++I I EQ
Sbjct: 264 VLINGEEGIIEQ 275
>gi|384175890|ref|YP_005557275.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349595114|gb|AEP91301.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 436
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 191/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I +QA A++E+ VIIF+V+G+
Sbjct: 62 ----------------DIGEE--PFLAQ----------IRQQAEIAMDEADVIIFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L + K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 94 EGVTAADEEVAKILYRT--KKPVVLAVNKLDNTEMR-ANIYDFYSLGFGEPYPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K + T+ EE + ++GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVAEHFKNIPETK--YNEE--VVQFCLIGRPNVGKSSLVNAMLGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT FT + Q+F ++DTAG+RK+ + TTE SV RA +AI RS+VVA
Sbjct: 207 AGTTRDAVDTSFTYNQ-QEFVIVDTAGMRKKGKVY---ETTEKYSVLRALKAIDRSEVVA 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 33/174 (18%)
Query: 157 NVPE----HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
N+PE + + ++GRPNVGKS+L N ++G R IV + G TRD + + + E
Sbjct: 165 NIPETKYNEEVVQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTSFTYNQQE 224
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F++VDT G+ + + + E T + +V R A AI+
Sbjct: 225 FVIVDTAGM----RKKGKVYE---------------TTEKYSVLR--------ALKAIDR 257
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
S V+ ++DG+ G+ D+ IA + + K +++ VNK ++ K + EF
Sbjct: 258 SEVVAVVLDGEEGIIEQDKRIAGYAHE--AGKAVVIVVNKWDAVDKDESTMKEF 309
>gi|222152562|ref|YP_002561737.1| GTP-binding protein EngA [Streptococcus uberis 0140J]
gi|254783170|sp|B9DTQ3.1|DER_STRU0 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|222113373|emb|CAR41004.1| GTP-binding protein EngA [Streptococcus uberis 0140J]
Length = 436
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/316 (43%), Positives = 187/316 (59%), Gaps = 48/316 (15%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRKFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A++E+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMDEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L + +K +ILAVNK ++P + +F++LG P P S++
Sbjct: 92 GKEGVTDADEYVAKMLYRT--NKPVILAVNKVDNPEMR-NDIYDFYALGLGDPYPASSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEE---NRIPAIAIVGRPNVGKSSILNALVGEDRT 397
G GTG++LD + +L VEEE + +++GRPNVGKSS++NA++GE+R
Sbjct: 149 GIGTGDILDAIIEKLP--------VEEEEINDNTIRFSLIGRPNVGKSSLINAILGEERV 200
Query: 398 IVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRR 457
I SP++GTTRDAIDT FT +GQ++ +IDTAG+RK + + TE SV RA RAI R
Sbjct: 201 IASPVAGTTRDAIDTHFTDQDGQEYNMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDR 257
Query: 458 SDVVALVIEAMACITE 473
SDVV LVI A I E
Sbjct: 258 SDVVLLVINAEEGIRE 273
>gi|379705869|ref|YP_005204328.1| GTP-binding protein [Streptococcus infantarius subsp. infantarius
CJ18]
gi|374682568|gb|AEZ62857.1| GTP-binding protein [Streptococcus infantarius subsp. infantarius
CJ18]
Length = 436
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 186/315 (59%), Gaps = 48/315 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSKILYRT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAI---AIVGRPNVGKSSILNALVGEDRTI 398
GTG++LD + L VEEE+ P I +++GRPNVGKSS++NA++GE+R I
Sbjct: 150 IGTGDVLDAIVENLP--------VEEEDENPDIIKFSLIGRPNVGKSSLINAILGEERVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SPI+GTTRDAIDT FT EGQ++ +IDTAG+RK + + TE SV R+ RAI RS
Sbjct: 202 ASPIAGTTRDAIDTNFTDSEGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDRS 258
Query: 459 DVVALVIEAMACITE 473
D+V +VI A I E
Sbjct: 259 DIVLMVINAEEGIRE 273
>gi|374308439|ref|YP_005054870.1| ribosome-associated GTPase EngA [Filifactor alocis ATCC 35896]
gi|291166767|gb|EFE28813.1| ribosome-associated GTPase EngA [Filifactor alocis ATCC 35896]
Length = 437
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 193/314 (61%), Gaps = 41/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P VAIVGRPNVGKS LFN+LVG AIV D PGVTRDR+YG + W F ++DTGG+
Sbjct: 1 MRPIVAIVGRPNVGKSTLFNKLVGSRVAIVEDTPGVTRDRIYGEAEWLTDYFTVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
N S +D+ +P+ + RQA A++ + VI+F+V+
Sbjct: 61 DNDS-------DDI----------------------IPAQMRRQAELAMDTADVILFVVN 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T D EIA+ LR+ K I+LAVNK ++ + +F+ LG PLPISA
Sbjct: 92 GRDGVTPQDREIAEQLRRT--KKPIVLAVNKVDN-KNLPDYFYDFYELGVGEPLPISASV 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G+LLD+V K + +EE + +AIVG+PN GKSSI+N ++GE+R IVS
Sbjct: 149 GLGIGDLLDVVAENFPK----DSNMEENKDVIKVAIVGKPNAGKSSIINRILGEERVIVS 204
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI+GTTRDAIDT F + Q++ IDTAGIRK++ I + E SV R++ A+ R+DV
Sbjct: 205 PIAGTTRDAIDTYFHVKD-QEYLFIDTAGIRKKSKIDEN---IEKYSVIRSYAAVERADV 260
Query: 461 VALVIEAMACITEQ 474
V +VI+A I+EQ
Sbjct: 261 VLIVIDANIGISEQ 274
>gi|73662580|ref|YP_301361.1| GTP-binding protein EngA [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|418576138|ref|ZP_13140284.1| GTP-binding protein EngA [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|123642627|sp|Q49XS9.1|DER_STAS1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|72495095|dbj|BAE18416.1| putative GTPase [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
gi|379325200|gb|EHY92332.1| GTP-binding protein EngA [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 436
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEVAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++P ++ +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQMLYKS--KKPVVLAVNKVDNPEMR-NEIYDFYSLGFGDPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K+ E+ ++ ++I+GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GLGDLLDAVVKHFKE----EEPDPYDDDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DTE++ + Q + LIDTAG+RK+ + + TE SV RA +AI RS+V+
Sbjct: 207 AGTTRDAVDTEYS-YDDQDYVLIDTAGMRKKGKVYEN---TEKYSVLRALKAIERSNVIL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 IVIDAEQGIIEQ 274
>gi|191638373|ref|YP_001987539.1| GTP-binding protein EngA [Lactobacillus casei BL23]
gi|301066427|ref|YP_003788450.1| GTPase [Lactobacillus casei str. Zhang]
gi|385820074|ref|YP_005856461.1| GTPase family protein [Lactobacillus casei LC2W]
gi|385823275|ref|YP_005859617.1| GTPase family protein [Lactobacillus casei BD-II]
gi|409997238|ref|YP_006751639.1| GTPase Der [Lactobacillus casei W56]
gi|417983454|ref|ZP_12624091.1| GTP-binding protein [Lactobacillus casei 21/1]
gi|417986743|ref|ZP_12627308.1| GTP-binding protein [Lactobacillus casei 32G]
gi|417992889|ref|ZP_12633241.1| GTP-binding protein [Lactobacillus casei CRF28]
gi|417996242|ref|ZP_12636524.1| GTP-binding protein [Lactobacillus casei M36]
gi|418002009|ref|ZP_12642136.1| GTP-binding protein [Lactobacillus casei UCD174]
gi|418007973|ref|ZP_12647844.1| GTP-binding protein [Lactobacillus casei UW4]
gi|418015249|ref|ZP_12654824.1| GTP-binding protein [Lactobacillus casei Lpc-37]
gi|238693036|sp|B3WE80.1|DER_LACCB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|190712675|emb|CAQ66681.1| GTP-binding protein engA [Lactobacillus casei BL23]
gi|300438834|gb|ADK18600.1| Predicted GTPase [Lactobacillus casei str. Zhang]
gi|327382401|gb|AEA53877.1| GTPase family protein [Lactobacillus casei LC2W]
gi|327385602|gb|AEA57076.1| GTPase family protein [Lactobacillus casei BD-II]
gi|406358250|emb|CCK22520.1| GTPase Der [Lactobacillus casei W56]
gi|410524477|gb|EKP99385.1| GTP-binding protein [Lactobacillus casei 32G]
gi|410528201|gb|EKQ03060.1| GTP-binding protein [Lactobacillus casei 21/1]
gi|410532680|gb|EKQ07382.1| GTP-binding protein [Lactobacillus casei CRF28]
gi|410535700|gb|EKQ10315.1| GTP-binding protein [Lactobacillus casei M36]
gi|410545160|gb|EKQ19465.1| GTP-binding protein [Lactobacillus casei UCD174]
gi|410547732|gb|EKQ21958.1| GTP-binding protein [Lactobacillus casei UW4]
gi|410551725|gb|EKQ25768.1| GTP-binding protein [Lactobacillus casei Lpc-37]
Length = 435
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/314 (45%), Positives = 193/314 (61%), Gaps = 43/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AIVGRPNVGKS +FNR++G +IV D PGVTRDR+YG S W EF ++DTGG+
Sbjct: 2 VLPTLAIVGRPNVGKSTIFNRILGERVSIVEDTPGVTRDRIYGTSEWLGKEFAVIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
DL E +A+ I+ QA AI+E+ VI+FL D
Sbjct: 62 ------------DLG--------------DEPFLAQ----IKDQAEIAIDEADVILFLAD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
++G+T ADE +A L + K ++LAVNK ++P + + +F+SLGF P P+S
Sbjct: 92 IESGVTDADERVAQILYR--AKKPVVLAVNKVDNPERR-QDIYDFYSLGFGEPYPLSGTH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD V + +ED E++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GIGLGDVLDAVLAAFP----SEDKSVEDDSI-KFSLIGRPNVGKSSLVNAILGENRVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI GTTRDAIDT+F + + F +IDTAGIRKR + + TE +V RA RAI RSDV
Sbjct: 204 PIEGTTRDAIDTKFEAVD-ETFTMIDTAGIRKRGKVYEN---TEKYAVMRALRAIDRSDV 259
Query: 461 VALVIEAMACITEQ 474
V VI A I EQ
Sbjct: 260 VLFVINAEEGIREQ 273
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 29/165 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N ++G NR IV G TRD + + + F ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLVNAILGENRVIVSPIEGTTRDAIDTKFEAVDETFTMIDTAGIRKR 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + AV R A AI+ S V++F+++ +
Sbjct: 236 GKVYEN-------------------TEKYAVMR--------ALRAIDRSDVVLFVINAEE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL 329
G+ D+++A + + + II+ VNK ++ K + +F +L
Sbjct: 269 GIREQDKKVAGYAHE--AGRGIIIVVNKWDTVEKDNHTMKDFENL 311
>gi|418427616|ref|ZP_13000623.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS2]
gi|387718169|gb|EIK06155.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS2]
Length = 436
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V S G E+ + ++I+GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GLGDLLDAVVSHF----GEEEEDPYDEDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
>gi|417989631|ref|ZP_12630133.1| GTP-binding protein [Lactobacillus casei A2-362]
gi|410537724|gb|EKQ12294.1| GTP-binding protein [Lactobacillus casei A2-362]
Length = 435
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/314 (45%), Positives = 193/314 (61%), Gaps = 43/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AIVGRPNVGKS +FNR++G +IV D PGVTRDR+YG S W EF ++DTGG+
Sbjct: 2 VLPTLAIVGRPNVGKSTIFNRILGERVSIVGDTPGVTRDRIYGTSEWLGKEFAVIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
DL E +A+ I+ QA AI+E+ VI+FL D
Sbjct: 62 ------------DLG--------------DEPFLAQ----IKDQAEIAIDEADVILFLAD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
++G+T ADE +A L + K ++LAVNK ++P + + +F+SLGF P P+S
Sbjct: 92 IESGVTDADERVAQILYR--AKKPVVLAVNKVDNPERR-QDIYDFYSLGFGEPYPLSGTH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD V + +ED E++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GIGLGDVLDAVLAAFP----SEDKSVEDDSI-KFSLIGRPNVGKSSLVNAILGENRVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI GTTRDAIDT+F + + F +IDTAGIRKR + + TE +V RA RAI RSDV
Sbjct: 204 PIEGTTRDAIDTKFEAVD-ETFTMIDTAGIRKRGKVYEN---TEKYAVMRALRAIDRSDV 259
Query: 461 VALVIEAMACITEQ 474
V VI A I EQ
Sbjct: 260 VLFVINAEEGIREQ 273
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 29/165 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N ++G NR IV G TRD + + + F ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLVNAILGENRVIVSPIEGTTRDAIDTKFEAVDETFTMIDTAGIRKR 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + AV R A AI+ S V++F+++ +
Sbjct: 236 GKVYEN-------------------TEKYAVMR--------ALRAIDRSDVVLFVINAEE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL 329
G+ D+++A + + + II+ VNK ++ K + +F +L
Sbjct: 269 GIREQDKKVAGYAHE--AGRGIIIVVNKWDTVEKDNHTMKDFENL 311
>gi|418327953|ref|ZP_12939085.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis
14.1.R1.SE]
gi|365232512|gb|EHM73508.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis
14.1.R1.SE]
Length = 436
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 140/310 (45%), Positives = 188/310 (60%), Gaps = 42/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVG+PNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 6 VAIVGKPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
E A + I QA AIEE+ VIIF+V+ + G
Sbjct: 62 --------------------------EIGDAPFQTQIRAQAEIAIEEADVIIFMVNVREG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT +DE +A L K+ K ++LAVNK ++ + +F+SLGF P PIS G G
Sbjct: 96 LTQSDEMVAQMLYKS--KKPVVLAVNKVDNLEMR-NDIYDFYSLGFGDPYPISGSHGLGL 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V K +ED +E+ ++I+GRPNVGKSS++NA++GE+R IVS ++G
Sbjct: 153 GDLLDAVVENFNK--ESEDPYDEDT--IRLSIIGRPNVGKSSLVNAILGEERVIVSNVAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV +V
Sbjct: 209 TTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSEVVLVV 264
Query: 465 IEAMACITEQ 474
I+A I EQ
Sbjct: 265 IDAEQGIIEQ 274
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSEVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K I++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTVEKDSKTMKKF 309
>gi|126653372|ref|ZP_01725476.1| GTP-binding protein EngA [Bacillus sp. B14905]
gi|126589888|gb|EAZ84019.1| GTP-binding protein EngA [Bacillus sp. B14905]
Length = 436
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W H+F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSSAEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I +QA AIEE+ VIIF+ +G+
Sbjct: 62 ----------------EIGDE--PFLEQ----------IRQQAEIAIEEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADE++A L K K ++LAVNK ++P M + +F++LGF P PIS G
Sbjct: 94 EGVTAADEQVAKILYKT--KKPVVLAVNKIDNPDMREM-IYDFYALGFGEPWPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD K ED + + + +++GRPNVGKSS++NA +G+DR IVS I
Sbjct: 151 GLGDLLDECAKHFPK----EDEEQYGDDVIKFSLIGRPNVGKSSLVNAFLGQDRVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT + + Q++ +IDTAG+RK+ I TTE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAIDTPY-AYDDQEYVIIDTAGMRKKGKIY---ETTEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVMNAEEGIQEQ 274
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N +G +R IV D G TRD + + + E++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSLVNAFLGQDRVIVSDIAGTTRDAIDTPYAYDDQEYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + I E T + +V R A AIE S V++ +++ +
Sbjct: 234 -RKKGKIYE---------------TTEKYSVLR--------ALRAIERSDVVLVVMNAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG-------IMQVSE-FWSLGFSPL 334
G+ D++IA + + K +++ VNK ++ K Q+ E F L ++P+
Sbjct: 270 GIQEQDKKIAGYAHE--AGKAVVIVVNKWDAIEKDEKTMNVFTQQIREHFLFLDYAPI 325
>gi|418321724|ref|ZP_12933063.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus VCU006]
gi|418875414|ref|ZP_13429671.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC93]
gi|365224339|gb|EHM65604.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus VCU006]
gi|377769970|gb|EHT93736.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC93]
Length = 436
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V S G E+ + ++I+GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GLGDLLDAVVSHF----GEEEEEPYDEDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
>gi|418878324|ref|ZP_13432559.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418895174|ref|ZP_13449269.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377694446|gb|EHT18811.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377694980|gb|EHT19344.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1057]
Length = 436
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V S G E+ + ++I+GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GLGDLLDAVVSHF----GEEEEDPYDEDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
>gi|336395617|ref|ZP_08577016.1| GTP-binding protein Der [Lactobacillus farciminis KCTC 3681]
Length = 437
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/314 (43%), Positives = 189/314 (60%), Gaps = 43/314 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P VA+VGRPNVGKS +FNR++ +IV D PGVTRDR+Y R+ W EF L+DTGG+
Sbjct: 3 VPVVALVGRPNVGKSTIFNRIINERLSIVEDTPGVTRDRIYSRASWLGREFRLIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
E + +M I+ QA AI+E+ VI+F+ +G
Sbjct: 62 -----------------------------EMSGEKMSVQIKNQAEIAIDEADVIVFITNG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+T DE++A L + K +ILAVNK ++P + + +F++LGF P PIS G
Sbjct: 93 QNGVTKEDEDVAKILYRT--KKPVILAVNKADNPEQR-QNIYDFYALGFGDPNPISGAQG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD E+ KV ED +EE+ I + +GRPNVGKSS++NA++G+ R IVS
Sbjct: 150 TGLGDLLD----EIVKVFPYEDKMEEDKTI-KFSFIGRPNVGKSSLVNAILGDQRVIVSD 204
Query: 402 ISGTTRDAIDTEFTGPEGQK-FRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
+ GTTRDAIDT++ + K F +IDTAGIRKR + + TE SV RA AI +SDV
Sbjct: 205 MQGTTRDAIDTKYHDEKLDKDFTMIDTAGIRKRGKVYEN---TEKYSVLRALSAIDKSDV 261
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 262 VCVVLNAEEGIREQ 275
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 44/210 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSF--WGEHEFMLVDTGGVL 222
+ + +GRPNVGKS+L N ++G R IV D G TRD + + + +F ++DT G+
Sbjct: 176 KFSFIGRPNVGKSSLVNAILGDQRVIVSDMQGTTRDAIDTKYHDEKLDKDFTMIDTAGIR 235
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A +AI++S V+ +++
Sbjct: 236 KRGKVYEN-------------------TEKYSVLR--------ALSAIDKSDVVCVVLNA 268
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSP- 333
+ G+ D+ +A + K +I+ VNK ++ +K + EF L ++P
Sbjct: 269 EEGIREQDKRVAGYAHN--AGKGVIIVVNKWDTLKKDTNTMKDFENQIRVEFQYLSYAPI 326
Query: 334 LPISAISGTGTGELLDLVCSELKKVEGTED 363
L SAI G ++ +LV +V G D
Sbjct: 327 LFTSAIKGQRLDQIPELVA----RVYGNRD 352
>gi|296112016|ref|YP_003622398.1| GTP-binding protein EngA [Leuconostoc kimchii IMSNU 11154]
gi|339490709|ref|YP_004705214.1| GTP-binding protein Der [Leuconostoc sp. C2]
gi|295833548|gb|ADG41429.1| GTP-binding protein EngA [Leuconostoc kimchii IMSNU 11154]
gi|338852381|gb|AEJ30591.1| GTP-binding protein Der [Leuconostoc sp. C2]
Length = 437
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 184/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G AIV D+PGVTRDR+Y + W +EF ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRMAGERIAIVEDQPGVTRDRLYAPAEWLNYEFRMIDTGGIE- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + E I Q AI+E+ VI+ + G+
Sbjct: 63 -LGDEPFLAE----------------------------IRAQVELAIDEADVIVMVASGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ADE +A L K K I+LA+NK ++P + +F+SLG P P+S G
Sbjct: 94 EGVTSADEVVAKMLYKTA--KPIVLAINKVDNPEMR-QDIYDFYSLGLGEPYPVSGAHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V E E +E+ + +I+GRPNVGKSSI+NA++GEDR IVS I
Sbjct: 151 GLGDMLDAVVKNFPD-EAAE---QEDEGVIKFSIIGRPNVGKSSIVNAMLGEDRVIVSSI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F PEG +F ++DTAG+RKR + + TE SV RA +AI S+V+
Sbjct: 207 EGTTRDAIDTRFVTPEGDEFIMVDTAGMRKRGKVYEN---TEKYSVMRALKAIDNSNVIL 263
Query: 463 LVIEAMACITEQ 474
+VI+A A I EQ
Sbjct: 264 MVIDAEAGIREQ 275
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 37/202 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +I+GRPNVGKS++ N ++G +R IV G TRD + R E EF++VDT G+
Sbjct: 177 KFSIIGRPNVGKSSIVNAMLGEDRVIVSSIEGTTRDAIDTRFVTPEGDEFIMVDTAGMRK 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S VI+ ++D +
Sbjct: 237 RGKVYEN-------------------TEKYSVMR--------ALKAIDNSNVILMVIDAE 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL---GFSPL---PIS 337
AG+ D+ +A + + + +I+ VNK ++ K + +F +L F L PI
Sbjct: 270 AGIREQDKHVAGFAHE--AGRAMIIVVNKWDAIEKDDRTMKDFENLIRAEFKFLDYAPII 327
Query: 338 AISGTGTGELLDLVCSELKKVE 359
+S TG+ LD + ++ V+
Sbjct: 328 FVSAK-TGQRLDRLPQLVRDVD 348
>gi|15924465|ref|NP_371999.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus Mu50]
gi|15927056|ref|NP_374589.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus N315]
gi|21283093|ref|NP_646181.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus MW2]
gi|49483662|ref|YP_040886.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49486314|ref|YP_043535.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650430|ref|YP_186359.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus COL]
gi|88195209|ref|YP_500010.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|148267959|ref|YP_001246902.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus JH9]
gi|150394023|ref|YP_001316698.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus JH1]
gi|151221596|ref|YP_001332418.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156979794|ref|YP_001442053.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus Mu3]
gi|221140958|ref|ZP_03565451.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253315982|ref|ZP_04839195.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253732117|ref|ZP_04866282.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253733278|ref|ZP_04867443.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
TCH130]
gi|255006261|ref|ZP_05144862.2| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257425539|ref|ZP_05601964.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428198|ref|ZP_05604596.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257430828|ref|ZP_05607210.1| small GTP-binding protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257433587|ref|ZP_05609945.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
E1410]
gi|257436428|ref|ZP_05612475.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M876]
gi|257795470|ref|ZP_05644449.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9781]
gi|258413278|ref|ZP_05681554.1| small GTP-binding protein [Staphylococcus aureus A9763]
gi|258420615|ref|ZP_05683557.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9719]
gi|258422494|ref|ZP_05685402.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9635]
gi|258426810|ref|ZP_05688030.1| GTP-binding protein engA [Staphylococcus aureus A9299]
gi|258444808|ref|ZP_05693137.1| GTP-binding protein engA [Staphylococcus aureus A8115]
gi|258447358|ref|ZP_05695502.1| small GTP-binding protein [Staphylococcus aureus A6300]
gi|258449757|ref|ZP_05697858.1| GTP-binding protein engA [Staphylococcus aureus A6224]
gi|258451133|ref|ZP_05699168.1| GTP-binding protein engA [Staphylococcus aureus A5948]
gi|258454573|ref|ZP_05702537.1| ribosome-associated GTPase EngA [Staphylococcus aureus A5937]
gi|262048997|ref|ZP_06021876.1| GTP-binding protein EngA [Staphylococcus aureus D30]
gi|262051644|ref|ZP_06023864.1| GTP-binding protein EngA [Staphylococcus aureus 930918-3]
gi|269203100|ref|YP_003282369.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus ED98]
gi|282892972|ref|ZP_06301207.1| ribosome-associated GTPase EngA [Staphylococcus aureus A8117]
gi|282904057|ref|ZP_06311945.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus C160]
gi|282905821|ref|ZP_06313676.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282911052|ref|ZP_06318854.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282914265|ref|ZP_06322052.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M899]
gi|282919188|ref|ZP_06326923.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus C427]
gi|282921722|ref|ZP_06329439.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9765]
gi|282924372|ref|ZP_06332046.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus C101]
gi|282928003|ref|ZP_06335612.1| ribosome-associated GTPase EngA [Staphylococcus aureus A10102]
gi|283958239|ref|ZP_06375690.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus A017934/97]
gi|284024473|ref|ZP_06378871.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus 132]
gi|293501290|ref|ZP_06667141.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510252|ref|ZP_06668960.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M809]
gi|293526847|ref|ZP_06671531.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M1015]
gi|295407224|ref|ZP_06817024.1| ribosome-associated GTPase EngA [Staphylococcus aureus A8819]
gi|295427983|ref|ZP_06820615.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|296275328|ref|ZP_06857835.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus MR1]
gi|297207866|ref|ZP_06924299.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297244648|ref|ZP_06928531.1| ribosome-associated GTPase EngA [Staphylococcus aureus A8796]
gi|300911951|ref|ZP_07129394.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus TCH70]
gi|304380942|ref|ZP_07363601.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|379014684|ref|YP_005290920.1| GTP-binding protein Der [Staphylococcus aureus subsp. aureus VC40]
gi|379021189|ref|YP_005297851.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus M013]
gi|384547715|ref|YP_005736968.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
ED133]
gi|384862076|ref|YP_005744796.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|384864698|ref|YP_005750057.1| small GTP-binding domain protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|384867617|ref|YP_005747813.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus TCH60]
gi|384870016|ref|YP_005752730.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
T0131]
gi|385781699|ref|YP_005757870.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 11819-97]
gi|386729173|ref|YP_006195556.1| GTP-binding protein [Staphylococcus aureus subsp. aureus 71193]
gi|386831026|ref|YP_006237680.1| putative GTPase [Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|387143083|ref|YP_005731476.1| putative GTPase [Staphylococcus aureus subsp. aureus TW20]
gi|387150616|ref|YP_005742180.1| GTP-binding protein EngA [Staphylococcus aureus 04-02981]
gi|387602748|ref|YP_005734269.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
ST398]
gi|404478822|ref|YP_006710252.1| GTPase [Staphylococcus aureus 08BA02176]
gi|415682272|ref|ZP_11447588.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
CGS00]
gi|415693541|ref|ZP_11455320.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
CGS03]
gi|416841186|ref|ZP_11904248.1| GTP-binding protein EngA [Staphylococcus aureus O11]
gi|416847529|ref|ZP_11907211.1| GTP-binding protein EngA [Staphylococcus aureus O46]
gi|417650507|ref|ZP_12300277.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21189]
gi|417651458|ref|ZP_12301221.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21172]
gi|417654332|ref|ZP_12304055.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21193]
gi|417797321|ref|ZP_12444517.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21305]
gi|417800220|ref|ZP_12447344.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21310]
gi|417800795|ref|ZP_12447903.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21318]
gi|417889153|ref|ZP_12533251.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21195]
gi|417889885|ref|ZP_12533964.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21200]
gi|417893012|ref|ZP_12537049.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21201]
gi|417896766|ref|ZP_12540709.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21235]
gi|417898011|ref|ZP_12541937.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21259]
gi|417901590|ref|ZP_12545466.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21266]
gi|417905407|ref|ZP_12549218.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21269]
gi|418277084|ref|ZP_12891765.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21178]
gi|418284125|ref|ZP_12896857.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21202]
gi|418284496|ref|ZP_12897216.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21209]
gi|418307207|ref|ZP_12918934.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21194]
gi|418310327|ref|ZP_12921872.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21331]
gi|418312082|ref|ZP_12923595.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21334]
gi|418316382|ref|ZP_12927820.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21340]
gi|418424621|ref|ZP_12997738.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS1]
gi|418430450|ref|ZP_13003365.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS3a]
gi|418433430|ref|ZP_13006192.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS4]
gi|418437091|ref|ZP_13008890.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS5]
gi|418439957|ref|ZP_13011662.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS6]
gi|418443013|ref|ZP_13014613.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS7]
gi|418446072|ref|ZP_13017548.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS8]
gi|418449020|ref|ZP_13020408.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS9]
gi|418451838|ref|ZP_13023172.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
VRS10]
gi|418454895|ref|ZP_13026155.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418457769|ref|ZP_13028971.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418558989|ref|ZP_13123536.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21252]
gi|418562533|ref|ZP_13126990.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21262]
gi|418565367|ref|ZP_13129774.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21264]
gi|418568499|ref|ZP_13132844.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21272]
gi|418570523|ref|ZP_13134790.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21283]
gi|418572830|ref|ZP_13137032.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21333]
gi|418579334|ref|ZP_13143429.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418582339|ref|ZP_13146417.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418600439|ref|ZP_13163903.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21343]
gi|418603309|ref|ZP_13166696.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21345]
gi|418640269|ref|ZP_13202501.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-3]
gi|418645414|ref|ZP_13207539.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-55]
gi|418652938|ref|ZP_13214900.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-99]
gi|418657614|ref|ZP_13219379.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-105]
gi|418662046|ref|ZP_13223600.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-122]
gi|418871252|ref|ZP_13425633.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-125]
gi|418881155|ref|ZP_13435373.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418884008|ref|ZP_13438201.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1769]
gi|418886738|ref|ZP_13440886.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418889292|ref|ZP_13443425.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1524]
gi|418892141|ref|ZP_13446254.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418898045|ref|ZP_13452115.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418900913|ref|ZP_13454970.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418903715|ref|ZP_13457756.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418906418|ref|ZP_13460444.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|418909221|ref|ZP_13463220.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG149]
gi|418912085|ref|ZP_13466066.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG547]
gi|418914573|ref|ZP_13468545.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418917305|ref|ZP_13471264.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418920555|ref|ZP_13474487.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418923088|ref|ZP_13477004.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418925737|ref|ZP_13479639.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418928759|ref|ZP_13482645.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1612]
gi|418931549|ref|ZP_13485390.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1750]
gi|418934382|ref|ZP_13488204.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418947094|ref|ZP_13499484.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-157]
gi|418951524|ref|ZP_13503610.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-160]
gi|418955624|ref|ZP_13507561.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-189]
gi|418978127|ref|ZP_13525928.1| GTP-binding protein [Staphylococcus aureus subsp. aureus DR10]
gi|418982417|ref|ZP_13530125.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418986084|ref|ZP_13533770.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1500]
gi|418988480|ref|ZP_13536152.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1835]
gi|418991337|ref|ZP_13538998.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1096]
gi|418994144|ref|ZP_13541779.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG290]
gi|419786030|ref|ZP_14311771.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-M]
gi|424773572|ref|ZP_18200629.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
CM05]
gi|424785311|ref|ZP_18212114.1| GTP-binding protein EngA [Staphylococcus aureus CN79]
gi|440707247|ref|ZP_20887946.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21282]
gi|440734925|ref|ZP_20914536.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus DSM
20231]
gi|443637847|ref|ZP_21121913.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21236]
gi|443638774|ref|ZP_21122807.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21196]
gi|448741639|ref|ZP_21723600.1| ribosome-associated GTPase EngA [Staphylococcus aureus KT/314250]
gi|448742923|ref|ZP_21724837.1| ribosome-associated GTPase EngA [Staphylococcus aureus KT/Y21]
gi|54037051|sp|P64060.1|DER_STAAN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|54037052|sp|P64061.1|DER_STAAW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|54040975|sp|P64059.1|DER_STAAM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|56748972|sp|Q6G988.1|DER_STAAS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|56749026|sp|Q6GGT6.1|DER_STAAR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|71151865|sp|Q5HFU8.1|DER_STAAC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|122539535|sp|Q2FYG0.1|DER_STAA8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166225860|sp|A7X2I1.1|DER_STAA1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|172048892|sp|A6QH24.1|DER_STAAE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|189037164|sp|A6U1U3.1|DER_STAA2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|189037165|sp|A5IT03.1|DER_STAA9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|13701274|dbj|BAB42568.1| SA1307 [Staphylococcus aureus subsp. aureus N315]
gi|14247246|dbj|BAB57637.1| GTP-binding protein [Staphylococcus aureus subsp. aureus Mu50]
gi|21204533|dbj|BAB95229.1| MW1364 [Staphylococcus aureus subsp. aureus MW2]
gi|49241791|emb|CAG40482.1| putative GTPase [Staphylococcus aureus subsp. aureus MRSA252]
gi|49244757|emb|CAG43193.1| putative GTPase [Staphylococcus aureus subsp. aureus MSSA476]
gi|57284616|gb|AAW36710.1| GTP-binding protein, Era/TrmE family [Staphylococcus aureus subsp.
aureus COL]
gi|87202767|gb|ABD30577.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147741028|gb|ABQ49326.1| small GTP-binding protein [Staphylococcus aureus subsp. aureus JH9]
gi|149946475|gb|ABR52411.1| small GTP-binding protein [Staphylococcus aureus subsp. aureus JH1]
gi|150374396|dbj|BAF67656.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156721929|dbj|BAF78346.1| hypothetical protein SAHV_1463 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253724164|gb|EES92893.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253728818|gb|EES97547.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
TCH130]
gi|257271996|gb|EEV04134.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275039|gb|EEV06526.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257278956|gb|EEV09575.1| small GTP-binding protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257281680|gb|EEV11817.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
E1410]
gi|257284710|gb|EEV14830.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M876]
gi|257789442|gb|EEV27782.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9781]
gi|257839842|gb|EEV64310.1| small GTP-binding protein [Staphylococcus aureus A9763]
gi|257843563|gb|EEV67970.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9719]
gi|257847251|gb|EEV71257.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9635]
gi|257849971|gb|EEV73929.1| GTP-binding protein engA [Staphylococcus aureus A9299]
gi|257850301|gb|EEV74254.1| GTP-binding protein engA [Staphylococcus aureus A8115]
gi|257853549|gb|EEV76508.1| small GTP-binding protein [Staphylococcus aureus A6300]
gi|257857005|gb|EEV79905.1| GTP-binding protein engA [Staphylococcus aureus A6224]
gi|257861188|gb|EEV84001.1| GTP-binding protein engA [Staphylococcus aureus A5948]
gi|257862956|gb|EEV85720.1| ribosome-associated GTPase EngA [Staphylococcus aureus A5937]
gi|259160485|gb|EEW45509.1| GTP-binding protein EngA [Staphylococcus aureus 930918-3]
gi|259162929|gb|EEW47492.1| GTP-binding protein EngA [Staphylococcus aureus D30]
gi|262075390|gb|ACY11363.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus ED98]
gi|269940966|emb|CBI49350.1| putative GTPase [Staphylococcus aureus subsp. aureus TW20]
gi|282313759|gb|EFB44152.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus C101]
gi|282316998|gb|EFB47372.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus C427]
gi|282322333|gb|EFB52657.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M899]
gi|282324747|gb|EFB55057.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282331113|gb|EFB60627.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282590300|gb|EFB95380.1| ribosome-associated GTPase EngA [Staphylococcus aureus A10102]
gi|282593984|gb|EFB98973.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9765]
gi|282595675|gb|EFC00639.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus C160]
gi|282764969|gb|EFC05094.1| ribosome-associated GTPase EngA [Staphylococcus aureus A8117]
gi|283470686|emb|CAQ49897.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
ST398]
gi|283790388|gb|EFC29205.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus A017934/97]
gi|285817155|gb|ADC37642.1| GTP-binding protein EngA [Staphylococcus aureus 04-02981]
gi|290920405|gb|EFD97469.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M1015]
gi|291096295|gb|EFE26556.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 58-424]
gi|291467196|gb|EFF09714.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M809]
gi|294967937|gb|EFG43966.1| ribosome-associated GTPase EngA [Staphylococcus aureus A8819]
gi|295128341|gb|EFG57975.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|296887440|gb|EFH26340.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297178678|gb|EFH37924.1| ribosome-associated GTPase EngA [Staphylococcus aureus A8796]
gi|298694764|gb|ADI97986.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
ED133]
gi|300886197|gb|EFK81399.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus TCH70]
gi|302751305|gb|ADL65482.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|304340528|gb|EFM06463.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|312438122|gb|ADQ77193.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus TCH60]
gi|312829865|emb|CBX34707.1| small GTP-binding domain protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315129191|gb|EFT85186.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
CGS03]
gi|315195372|gb|EFU25759.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
CGS00]
gi|323439522|gb|EGA97243.1| GTP-binding protein EngA [Staphylococcus aureus O11]
gi|323442239|gb|EGA99870.1| GTP-binding protein EngA [Staphylococcus aureus O46]
gi|329314151|gb|AEB88564.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
T0131]
gi|329723199|gb|EGG59730.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21189]
gi|329727642|gb|EGG64098.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21172]
gi|329731317|gb|EGG67683.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21193]
gi|334266813|gb|EGL85283.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21305]
gi|334271686|gb|EGL90069.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21310]
gi|334277675|gb|EGL95899.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21318]
gi|341840032|gb|EGS81552.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21235]
gi|341843683|gb|EGS84905.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21269]
gi|341845429|gb|EGS86631.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21266]
gi|341849513|gb|EGS90656.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21259]
gi|341852610|gb|EGS93497.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21195]
gi|341855578|gb|EGS96422.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21200]
gi|341856377|gb|EGS97216.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21201]
gi|359830498|gb|AEV78476.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus M013]
gi|364522688|gb|AEW65438.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 11819-97]
gi|365164989|gb|EHM56819.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21202]
gi|365173356|gb|EHM63924.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21209]
gi|365173874|gb|EHM64308.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21178]
gi|365237067|gb|EHM77934.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21331]
gi|365239204|gb|EHM80026.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21334]
gi|365241066|gb|EHM81821.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21340]
gi|365245887|gb|EHM86489.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21194]
gi|371973637|gb|EHO90985.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21262]
gi|371974036|gb|EHO91378.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21264]
gi|371976339|gb|EHO93629.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21252]
gi|371979327|gb|EHO96560.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21272]
gi|371983762|gb|EHP00902.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21333]
gi|371983999|gb|EHP01130.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21283]
gi|374363381|gb|AEZ37486.1| GTP-binding protein Der [Staphylococcus aureus subsp. aureus VC40]
gi|374393124|gb|EHQ64439.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21345]
gi|374394380|gb|EHQ65667.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21343]
gi|375014833|gb|EHS08504.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-3]
gi|375020860|gb|EHS14371.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-99]
gi|375023482|gb|EHS16938.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-55]
gi|375030350|gb|EHS23668.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-105]
gi|375036991|gb|EHS30045.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-122]
gi|375368721|gb|EHS72629.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-125]
gi|375370710|gb|EHS74508.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-189]
gi|375372497|gb|EHS76235.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-160]
gi|375376859|gb|EHS80368.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-157]
gi|377697361|gb|EHT21716.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377703381|gb|EHT27697.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377704698|gb|EHT29007.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377705902|gb|EHT30206.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377710749|gb|EHT34987.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377714343|gb|EHT38544.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377714831|gb|EHT39030.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377717573|gb|EHT41748.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377722342|gb|EHT46468.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG547]
gi|377723459|gb|EHT47584.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377725691|gb|EHT49804.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377730435|gb|EHT54502.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377731345|gb|EHT55401.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377735047|gb|EHT59083.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377738671|gb|EHT62680.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377742730|gb|EHT66715.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377743941|gb|EHT67919.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG290]
gi|377744806|gb|EHT68783.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG2018]
gi|377750479|gb|EHT74417.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377752627|gb|EHT76546.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG149]
gi|377752800|gb|EHT76718.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1524]
gi|377758075|gb|EHT81963.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377761080|gb|EHT84956.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|377763323|gb|EHT87179.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|377764281|gb|EHT88134.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC348]
gi|377770476|gb|EHT94237.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC128]
gi|379993743|gb|EIA15188.1| GTP-binding protein [Staphylococcus aureus subsp. aureus DR10]
gi|383361331|gb|EID38705.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-M]
gi|384230466|gb|AFH69713.1| GTP-binding protein [Staphylococcus aureus subsp. aureus 71193]
gi|385196418|emb|CCG16046.1| putative GTPase [Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|387718419|gb|EIK06389.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS3a]
gi|387719829|gb|EIK07760.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS1]
gi|387725430|gb|EIK13046.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS4]
gi|387727392|gb|EIK14908.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS5]
gi|387730578|gb|EIK17956.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS6]
gi|387736000|gb|EIK23110.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS8]
gi|387737029|gb|EIK24110.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS7]
gi|387737275|gb|EIK24349.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS9]
gi|387744719|gb|EIK31483.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
VRS10]
gi|387745387|gb|EIK32145.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387746974|gb|EIK33691.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
VRS11b]
gi|402347211|gb|EJU82257.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
CM05]
gi|404440311|gb|AFR73504.1| putative GTPase [Staphylococcus aureus 08BA02176]
gi|421956721|gb|EKU09050.1| GTP-binding protein EngA [Staphylococcus aureus CN79]
gi|436431020|gb|ELP28374.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus DSM
20231]
gi|436506003|gb|ELP41842.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21282]
gi|443404884|gb|ELS63501.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21236]
gi|443408608|gb|ELS67126.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21196]
gi|445547606|gb|ELY15871.1| ribosome-associated GTPase EngA [Staphylococcus aureus KT/314250]
gi|445563610|gb|ELY19767.1| ribosome-associated GTPase EngA [Staphylococcus aureus KT/Y21]
Length = 436
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V S G E+ + ++I+GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GLGDLLDAVVSHF----GEEEEDPYDEDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
>gi|449878037|ref|ZP_21783457.1| GTP-binding protein EngA [Streptococcus mutans S1B]
gi|449940830|ref|ZP_21805239.1| GTP-binding protein EngA [Streptococcus mutans 11A1]
gi|449152930|gb|EMB56625.1| GTP-binding protein EngA [Streptococcus mutans 11A1]
gi|449250029|gb|EMC48112.1| GTP-binding protein EngA [Streptococcus mutans S1B]
Length = 436
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/314 (43%), Positives = 186/314 (59%), Gaps = 46/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ +T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KESITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAIVDNLPA-----EAQEENSDIIKFSLIGRPNVGKSSLINAILGEDRVIA 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SP++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD
Sbjct: 203 SPVAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSD 259
Query: 460 VVALVIEAMACITE 473
+V +V+ A I E
Sbjct: 260 IVLMVLNAEEGIRE 273
>gi|153953981|ref|YP_001394746.1| GTP-binding protein EngA [Clostridium kluyveri DSM 555]
gi|219854595|ref|YP_002471717.1| hypothetical protein CKR_1252 [Clostridium kluyveri NBRC 12016]
gi|189037142|sp|A5N7W7.1|DER_CLOK5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783148|sp|B9E1C8.1|DER_CLOK1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|146346862|gb|EDK33398.1| Hypothetical protein CKL_1356 [Clostridium kluyveri DSM 555]
gi|219568319|dbj|BAH06303.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 438
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 190/312 (60%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y ++ W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVEDTPGVTRDRVYAQAEWLNYNFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + +++M RQA AIE + VIIF+VDG+
Sbjct: 62 ----EPE-------------------NNDVIISKM----RRQAQVAIETANVIIFIVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD+E+A LRK+ K I+L VNK ++ ++ + EF++LG P+ ISA G
Sbjct: 95 EGLTAADKEVAQMLRKS--KKPIVLVVNKIDNMKQE-NYIYEFYNLGIGEPISISASQGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD + K EG ED E++ IA +G+PNVGKSS++N L+GE+R IVS I
Sbjct: 152 GLGDMLDKLVENFKN-EGNED---EDSEYIKIAFIGKPNVGKSSLINKLLGEERVIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID+ EG KF LIDTAG+R+++ + E SV R + A+ R+DV
Sbjct: 208 PGTTRDAIDSYLETDEG-KFLLIDTAGVRRKSKVKEE---IEKYSVIRTYTAVERADVCI 263
Query: 463 LVIEAMACITEQ 474
L+++A I+EQ
Sbjct: 264 LMLDATHDISEQ 275
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 45/208 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A +G+PNVGKS+L N+L+G R IV D PG TRD + E +F+L+DT GV
Sbjct: 178 KIAFIGKPNVGKSSLINKLLGEERVIVSDIPGTTRDAIDSYLETDEGKFLLIDTAGVRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I + I T A+E + V I ++D
Sbjct: 238 SKVKEEIEKYSVIRT---------------------------YTAVERADVCILMLDATH 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
++ DE+I + + ++K I++ +NK + K V+++ + + ++P L
Sbjct: 271 DISEQDEKIIGYAHE--LNKAIMVVINKWDLVDKDTKTVNKYKTSIGSSLSFMSYAPYLF 328
Query: 336 ISAISGTGTGELLDLV-------CSELK 356
ISA +G + +V C ++K
Sbjct: 329 ISAKTGQRVNRIFKMVRECYDNYCKQIK 356
>gi|384550236|ref|YP_005739488.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302333085|gb|ADL23278.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 436
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V S G E+ + ++I+GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GLGDLLDAVVSHF----GEEEEDPYDEDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
>gi|296332978|ref|ZP_06875435.1| GTP-binding protein EngA [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305674918|ref|YP_003866590.1| ribosome 50S subunit assembly GTPase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|443634898|ref|ZP_21119070.1| GTP-binding protein EngA [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|296149829|gb|EFG90721.1| GTP-binding protein EngA [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413162|gb|ADM38281.1| GTPase essential for ribosome 50S subunit assembly [Bacillus
subtilis subsp. spizizenii str. W23]
gi|443345323|gb|ELS59388.1| GTP-binding protein EngA [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 436
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 192/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I +QA A++E+ VIIF+V+G+
Sbjct: 62 ----------------DIGDE--PFLAQ----------IRQQAEIAMDEADVIIFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L + K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 94 EGVTAADEEVAKILYRT--KKPVVLAVNKLDNTEMR-ANIYDFYSLGFGEPYPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K + T+ +EE + ++GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVAEHFKNIPETK--YDEE--VVQFCLIGRPNVGKSSLVNAMLGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT FT + Q+F ++DTAG+RK+ + TTE SV RA +AI RS+VVA
Sbjct: 207 AGTTRDAVDTAFTYNQ-QEFVIVDTAGMRKKGKVY---ETTEKYSVLRALKAIDRSEVVA 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 33/174 (18%)
Query: 157 NVPE----HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
N+PE + + ++GRPNVGKS+L N ++G R IV + G TRD + + + E
Sbjct: 165 NIPETKYDEEVVQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTAFTYNQQE 224
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F++VDT G+ + + + E T + +V R A AI+
Sbjct: 225 FVIVDTAGM----RKKGKVYE---------------TTEKYSVLR--------ALKAIDR 257
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
S V+ ++DG+ G+ D+ IA + + K +++ VNK ++ K + EF
Sbjct: 258 SEVVAVVLDGEEGIIEQDKRIAGYAHE--AGKAVVIVVNKWDAVDKDESTMKEF 309
>gi|379795836|ref|YP_005325834.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872826|emb|CCE59165.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 436
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V S G E+ + ++I+GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GLGDLLDAVVSHF----GEEEEDPYDEDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
>gi|299538553|ref|ZP_07051836.1| GTP-binding protein EngA [Lysinibacillus fusiformis ZC1]
gi|424736594|ref|ZP_18165053.1| GTP-binding protein EngA [Lysinibacillus fusiformis ZB2]
gi|298726140|gb|EFI66732.1| GTP-binding protein EngA [Lysinibacillus fusiformis ZC1]
gi|422949590|gb|EKU43964.1| GTP-binding protein EngA [Lysinibacillus fusiformis ZB2]
Length = 436
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 190/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W H+F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSSAEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------EIGDE--PFLEQ----------IRQQAEIAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADE++A L K K ++LAVNK ++P M + +F++LGF P PIS G
Sbjct: 94 EGVTAADEQVAKILYKT--KKPVVLAVNKIDNPDMREM-IYDFYALGFGEPWPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD K ED + + + +++GRPNVGKSS++NA +G++R IVS I
Sbjct: 151 GLGDLLDECAKHFPK----EDEEQYGDDVIKFSLIGRPNVGKSSLVNAFLGQERVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT + +GQ++ +IDTAG+RK+ I TTE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAIDTPY-AYDGQEYVIIDTAGMRKKGKIY---ETTEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIQEQ 274
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N +G R IV + G TRD + + E++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSLVNAFLGQERVIVSNIAGTTRDAIDTPYAYDGQEYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + I E T + +V R A AIE S V++ +++ +
Sbjct: 234 -RKKGKIYE---------------TTEKYSVLR--------ALRAIERSDVVLVVLNAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG-------IMQVSE-FWSLGFSPL 334
G+ D++IA + + K +I+ VNK ++ K Q+ E F L ++P+
Sbjct: 270 GIQEQDKKIAGYAHE--AGKAVIIVVNKWDAIEKDEKTMNVFTQQIREHFLFLDYAPI 325
>gi|304406963|ref|ZP_07388617.1| ribosome-associated GTPase EngA [Paenibacillus curdlanolyticus YK9]
gi|304343950|gb|EFM09790.1| ribosome-associated GTPase EngA [Paenibacillus curdlanolyticus YK9]
Length = 440
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 195/312 (62%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR++G AIV D+PGVTRDR+YG W F +VDTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRVIGDRLAIVEDKPGVTRDRIYGTGEWNGRAFSIVDTGGIE- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ IM+ + RM QA A+EE+ VIIF+VD +
Sbjct: 63 -IDGEDEIMKSV---------------------RM------QAELAVEEADVIIFMVDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
AG+T AD+E+A L ++ K I++AVNK ++ + + V EF+ LGF +P+ IS GT
Sbjct: 95 AGMTHADDEVAQMLFRSR--KPIVVAVNKVDNFNR-MDDVYEFYGLGFGTPVAISGSHGT 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD +L E ++ +E+ + +A++GRPNVGKSS++NA++GE+R IVS +
Sbjct: 152 GIGDLLDAAVEKLP--EQVDEEYDED--VIRVALIGRPNVGKSSLVNAILGEERVIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F +GQ++ LIDTAG+RKR + TTE SV R+ +AI R+DVV
Sbjct: 208 AGTTRDAIDTPFE-KDGQRYVLIDTAGMRKRGKVY---ETTEKYSVMRSLKAIERADVVL 263
Query: 463 LVIEAMACITEQ 474
++I I EQ
Sbjct: 264 ILINGEEGIIEQ 275
>gi|157692783|ref|YP_001487245.1| GTP-binding protein EngA [Bacillus pumilus SAFR-032]
gi|166920097|sp|A8FEL8.1|DER_BACP2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|157681541|gb|ABV62685.1| GTPase [Bacillus pumilus SAFR-032]
Length = 436
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I QA A++E+ VIIF+V+G+
Sbjct: 62 ----------------DIGDE--PFLAQ----------IRHQAEIAMDEADVIIFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ADEE+A L + K ++LAVNK ++P V +F++LGF P PIS G
Sbjct: 94 DGVTSADEEVAKILYRT--KKPVVLAVNKLDNPEMR-SDVYDFYALGFGEPYPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K + T+ + ++ ++GRPNVGKSS++NA++GEDR IVS I
Sbjct: 151 GLGDLLDAVAEHFKNLPDTQ----YDEQVVQFCLIGRPNVGKSSLVNAMLGEDRVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT F + + F ++DTAG+RK+ + TTE SV RA +AI RSDVVA
Sbjct: 207 AGTTRDAVDTMFAYNQ-RDFVIVDTAGMRKKGKVY---ETTEKYSVLRALKAIDRSDVVA 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ ++GRPNVGKS+L N ++G +R IV + G TRD + + + +F++VDT G+
Sbjct: 177 QFCLIGRPNVGKSSLVNAMLGEDRVIVSNIAGTTRDAVDTMFAYNQRDFVIVDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AI+ S V+ ++DG+
Sbjct: 234 -RKKGKVYE---------------TTEKYSVLR--------ALKAIDRSDVVAVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + K +++ VNK ++ K + EF
Sbjct: 270 GIIEQDKRIAGYAHE--AGKAVVIVVNKWDAVEKDERTMKEF 309
>gi|317495375|ref|ZP_07953744.1| ribosome-associated GTPase EngA [Gemella morbillorum M424]
gi|316914434|gb|EFV35911.1| ribosome-associated GTPase EngA [Gemella morbillorum M424]
Length = 435
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 186/312 (59%), Gaps = 43/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS +FN+++G +IV D GVTRDR+Y ++ W + F ++DTGG
Sbjct: 4 PTVAIIGRPNVGKSTIFNKIIGDRLSIVEDVAGVTRDRIYSKAEWLNYSFFMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I +E P + I QA AI+E+ VIIFL +G+
Sbjct: 61 -----------------IELEDTPFQKQ----------IRAQAELAIDEADVIIFLTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ DEE+A L K DK ++LAVNK ++ M + +F+SLGF P PIS G
Sbjct: 94 DGVTSDDEEVAKLLYKT--DKPVVLAVNKIDNFDMNHM-IYDFYSLGFGDPFPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD VC K ++ EEE+ +++GRPNVGKSS++N ++GE+R I S I
Sbjct: 151 GIGDLLDEVCKNFKVLDE-----EEEDEKIRFSLIGRPNVGKSSLINTILGEERVIASDI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT+F G ++ +IDTAGIRKR + + E SV R+ +AI RSDVV
Sbjct: 206 AGTTRDAIDTDFK-HNGDEYVVIDTAGIRKRGKVYEA---CEKYSVLRSLKAIERSDVVL 261
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 262 VVLNAEEGIIEQ 273
>gi|400289506|ref|ZP_10791535.1| GTP-binding protein EngA [Streptococcus ratti FA-1 = DSM 20564]
gi|399922144|gb|EJN94959.1| GTP-binding protein EngA [Streptococcus ratti FA-1 = DSM 20564]
Length = 436
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/314 (42%), Positives = 187/314 (59%), Gaps = 46/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYASAEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + +K +ILAVNK ++P + +F+SLG P P+S++ G
Sbjct: 93 REGVTDADEYVARILYRT--NKPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
GTG++LD + L K E D+++ +++GRPNVGKSS++NA++GE+R I
Sbjct: 150 LGTGDVLDAIVQNLPTKFEEDNPDVIK-------FSLIGRPNVGKSSLINAILGEERVIA 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SP++GTTRDA+DT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSD
Sbjct: 203 SPVAGTTRDAVDTHFTDSQGQEFIMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIERSD 259
Query: 460 VVALVIEAMACITE 473
+V +VI A I E
Sbjct: 260 IVLMVINAEEGIRE 273
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R I G TRD + + G+ EF+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAVDTHFTDSQGQ-EFIMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AIE S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIERSDIVLMVINA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K II+ VNK + +K V++ F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIIIVVNKWDRVKKDNHTVAQWEDDVKNNFQYITYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 IFVSALTKQRLNKLPDMI 343
>gi|410594999|ref|YP_006951726.1| GTPase Der [Streptococcus agalactiae SA20-06]
gi|410518638|gb|AFV72782.1| GTPase Der [Streptococcus agalactiae SA20-06]
Length = 436
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 186/316 (58%), Gaps = 48/316 (15%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+ E+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQADIAMTEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L K +K +ILAVNK ++P + +F+SLG P +S++
Sbjct: 92 GKEGVTDADEYVSRILYKT--NKPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYLLSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAI---AIVGRPNVGKSSILNALVGEDRT 397
G GTG++LD + L VEEEN P I +++GRPNVGKSS++NA++GEDR
Sbjct: 149 GIGTGDILDAIVENLP--------VEEENENPDIIRFSLIGRPNVGKSSLINAILGEDRV 200
Query: 398 IVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRR 457
I SP++GTTRDAIDT F +GQ++ +IDTAG+RK + + TE SV R+ RAI R
Sbjct: 201 IASPVAGTTRDAIDTNFVDSQGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDR 257
Query: 458 SDVVALVIEAMACITE 473
SDVV +VI A I E
Sbjct: 258 SDVVLMVINAEEGIRE 273
>gi|449094778|ref|YP_007427269.1| GTP-binding protein EngA [Bacillus subtilis XF-1]
gi|449028693|gb|AGE63932.1| GTP-binding protein EngA [Bacillus subtilis XF-1]
Length = 436
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 191/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I +QA A++E+ VIIF+V+G+
Sbjct: 62 ----------------DIGDE--PFLAQ----------IRQQAEIAMDEADVIIFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L + K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 94 EGVTAADEEVAKILYRT--KKPVVLAVNKLDNTEMR-ANIYDFYSLGFGEPYPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K + T+ EE + ++GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVAEHFKNIPETK--YNEE--VVQFCLIGRPNVGKSSLVNAMLGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT FT + Q+F ++DTAG+RK+ + TTE SV RA +AI RS+VVA
Sbjct: 207 AGTTRDAVDTSFTYNQ-QEFVIVDTAGMRKKGKVY---ETTEKYSVLRALKAIDRSEVVA 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 33/174 (18%)
Query: 157 NVPE----HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
N+PE + + ++GRPNVGKS+L N ++G R IV + G TRD + + + E
Sbjct: 165 NIPETKYNEEVVQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTSFTYNQQE 224
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F++VDT G+ + + + E T + +V R A AI+
Sbjct: 225 FVIVDTAGM----RKKGKVYE---------------TTEKYSVLR--------ALKAIDR 257
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
S V+ ++DG+ G+ D+ IA + + K +++ VNK ++ K + EF
Sbjct: 258 SEVVAVVLDGEEGIIEQDKRIAGYAHE--AGKAVVIVVNKWDAVDKDESTMKEF 309
>gi|450063589|ref|ZP_21844997.1| GTP-binding protein EngA [Streptococcus mutans NLML5]
gi|449204554|gb|EMC05344.1| GTP-binding protein EngA [Streptococcus mutans NLML5]
Length = 436
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/314 (43%), Positives = 186/314 (59%), Gaps = 46/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ +T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KESITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAIVDNLPA-----EAQEESSDIIKFSLIGRPNVGKSSLINAILGEDRVIA 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SP++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD
Sbjct: 203 SPVAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSD 259
Query: 460 VVALVIEAMACITE 473
+V +V+ A I E
Sbjct: 260 IVLMVLNAEEGIRE 273
>gi|449964022|ref|ZP_21811107.1| GTP-binding protein EngA [Streptococcus mutans 15VF2]
gi|449172848|gb|EMB75456.1| GTP-binding protein EngA [Streptococcus mutans 15VF2]
Length = 436
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/314 (43%), Positives = 186/314 (59%), Gaps = 46/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ +T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KESITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAIVDNLPA-----EAQEESSDIIKFSLIGRPNVGKSSLINAILGEDRVIA 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SP++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD
Sbjct: 203 SPVAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSD 259
Query: 460 VVALVIEAMACITE 473
+V +V+ A I E
Sbjct: 260 IVLMVLNAEEGIRE 273
>gi|350266457|ref|YP_004877764.1| GTP-binding protein EngA [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599344|gb|AEP87132.1| GTP-binding protein EngA [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 436
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 192/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I +QA A++E+ VIIF+V+G+
Sbjct: 62 ----------------DIGDE--PFLAQ----------IRQQAEIAMDEADVIIFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L + K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 94 EGVTAADEEVAKILYRT--KKPVVLAVNKLDNTEMR-ANIYDFYSLGFGEPYPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K + T+ +EE + ++GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVAEHFKNIPETK--YDEE--VIQFCLIGRPNVGKSSLVNAMLGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT FT + Q+F ++DTAG+RK+ + TTE SV RA +AI RS+VVA
Sbjct: 207 AGTTRDAVDTAFTYNQ-QEFVIVDTAGMRKKGKVY---ETTEKYSVLRALKAIDRSEVVA 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 33/174 (18%)
Query: 157 NVPE----HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
N+PE + + ++GRPNVGKS+L N ++G R IV + G TRD + + + E
Sbjct: 165 NIPETKYDEEVIQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTAFTYNQQE 224
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F++VDT G+ + + + E T + +V R A AI+
Sbjct: 225 FVIVDTAGM----RKKGKVYE---------------TTEKYSVLR--------ALKAIDR 257
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
S V+ ++DG+ G+ D+ IA + + K +++ VNK ++ K + EF
Sbjct: 258 SEVVAVVLDGEEGIIEQDKRIAGYAHE--AGKAVVIVVNKWDAVDKDESTMKEF 309
>gi|325289812|ref|YP_004265993.1| GTP-binding protein engA [Syntrophobotulus glycolicus DSM 8271]
gi|324965213|gb|ADY55992.1| GTP-binding protein engA [Syntrophobotulus glycolicus DSM 8271]
Length = 443
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 193/312 (61%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+VG AIV + PGVTRDR+Y + W F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRVVGRMIAIVENTPGVTRDRLYFEAQWLNRNFTLIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+S P + S++++QA A+EE+ V++F++DG+
Sbjct: 64 KDQSTP----------------------------LSSLMKQQAEIAVEEADVVVFVLDGK 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
T DE +A +LR + K ++L VNK E+ + ++ E+ LGF P+P+SA G
Sbjct: 96 TKATVEDEMVAKFLRSS--GKPVVLVVNKVENFKNYEVESYEYLELGFGEPIPVSAAHGM 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G++LD V L + + +ED+ + + IA++GRPNVGKSS++N +VGE+R IVS I
Sbjct: 154 NIGDMLDKVVENLPE-DDSEDVSPD---VIKIAVIGRPNVGKSSLVNKMVGEERVIVSDI 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F E + + LIDTAGIR+R IA TE SV R+FRAI R+DVV
Sbjct: 210 AGTTRDAIDTPFRF-EDRDYVLIDTAGIRRRKKIA---ELTENYSVIRSFRAIDRADVVL 265
Query: 463 LVIEAMACITEQ 474
++++A+ +T+Q
Sbjct: 266 MMLDAVEGVTDQ 277
>gi|257876568|ref|ZP_05656221.1| GTP-binding protein engA [Enterococcus casseliflavus EC20]
gi|257810734|gb|EEV39554.1| GTP-binding protein engA [Enterococcus casseliflavus EC20]
Length = 436
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 183/314 (58%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYATGEWLGREFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
DL+ P M I+ QA AI+E+ VI+F+
Sbjct: 62 ----------DLS--------------------DEPFMDQIKHQAEIAIDEADVIVFITS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+ G+T ADE +A L K+ +K +ILAVNK ++P + EF+ LG P PIS
Sbjct: 92 AREGVTDADELVARLLYKS--NKPVILAVNKVDNPEMR-TDIYEFYGLGLGDPYPISGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD T + EE++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGIGDVLDEAVKHF-----TNEAEEEDDSIIKFSLIGRPNVGKSSLINAILGEERVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT FT GQ+F +IDTAG+RK+ I S TE SV RA RAI RSDV
Sbjct: 204 DIEGTTRDAIDTHFTSESGQEFTMIDTAGMRKKGKIYES---TEKYSVMRAMRAIERSDV 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R IV D G TRD + F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIVSDIEGTTRDAI-DTHFTSESGQEFTMIDTAGM- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + I E +T + +V R A AIE S V++ +++
Sbjct: 234 ---RKKGKIYE---------------STEKYSVMR--------AMRAIERSDVVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ IA + + + II+ VNK ++ +K + EF L ++P+
Sbjct: 268 EEGIREQDKRIAGYAHE--AGRGIIIVVNKWDTLKKETNTMRDFEEEIRDEFQYLDYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L L+
Sbjct: 326 IFVSAVTKQRLNKLPQLI 343
>gi|428279751|ref|YP_005561486.1| GTP-binding protein EngA [Bacillus subtilis subsp. natto BEST195]
gi|291484708|dbj|BAI85783.1| GTP-binding protein EngA [Bacillus subtilis subsp. natto BEST195]
Length = 436
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 191/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I +QA A++E+ VIIF+V+G+
Sbjct: 62 ----------------DIGDE--PFLAQ----------IRQQAEIAMDEADVIIFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L + K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 94 EGVTAADEEVAKILYRT--KKPVVLAVNKLDNTEMR-ANIYDFYSLGFGEPYPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K + T+ EE + ++GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVAEHFKNIPETK--YNEE--VVQFCLIGRPNVGKSSLVNAMLGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT FT + Q+F ++DTAG+RK+ + TTE SV RA +AI RS+VVA
Sbjct: 207 AGTTRDAVDTSFTYNQ-QEFVIVDTAGMRKKGKVY---ETTEKYSVLRALKAIDRSEVVA 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 33/174 (18%)
Query: 157 NVPE----HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
N+PE + + ++GRPNVGKS+L N ++G R IV + G TRD + + + E
Sbjct: 165 NIPETKYNEEVVQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTSFTYNQQE 224
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F++VDT G+ + + + E T + +V R A AI+
Sbjct: 225 FVIVDTAGM----RKKGKVYE---------------TTEKYSVLR--------ALKAIDR 257
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
S V+ ++DG+ G+ D+ IA + + K +++ VNK ++ K + EF
Sbjct: 258 SEVVAVVLDGEEGIIEQDKRIAGYAHE--AGKAVVIVVNKWDAVDKDESTMKEF 309
>gi|357636396|ref|ZP_09134271.1| ribosome-associated GTPase EngA [Streptococcus macacae NCTC 11558]
gi|357584850|gb|EHJ52053.1| ribosome-associated GTPase EngA [Streptococcus macacae NCTC 11558]
Length = 436
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/314 (44%), Positives = 187/314 (59%), Gaps = 46/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSMLFNRIAGERISIVEDVEGVTRDRIYANANWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA AI E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAITEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILAVNK ++P + +F++LG P P+S++ G
Sbjct: 93 KEGVTDADEYVAKILYRTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN--RIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
GTG+LLD K +E EEEN RI +++GRPNVGKSS++NA++GE+R I
Sbjct: 150 IGTGDLLD------KIIESLPIQTEEENPDRI-KFSLIGRPNVGKSSLINAILGEERVIA 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SP++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSD
Sbjct: 203 SPLAGTTRDAIDTTFTDAQGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAKRAIDRSD 259
Query: 460 VVALVIEAMACITE 473
+V +VI A I E
Sbjct: 260 IVLMVINAEEGIRE 273
>gi|223994975|ref|XP_002287171.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976287|gb|EED94614.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 460
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/323 (45%), Positives = 195/323 (60%), Gaps = 48/323 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNR--AIVVDEPGVTRDRMYGRS-FWGEHEFMLVDTGG 220
P +A+VGRPNVGKSAL NRL G AIV DE G+TRDR Y + F GE F LVDTGG
Sbjct: 1 PLIAVVGRPNVGKSALVNRLAGTQSGGAIVADEEGITRDRTYRNAEFLGEA-FQLVDTGG 59
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ + +D +A A+ I QA AIEES +I +V
Sbjct: 60 L---------VFDD----------------NDALFAKE---IREQAMIAIEESAGVILVV 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKF-IILAVNKCESPRKGIMQVSEFWSLGFS-PLPISA 338
DGQ G T+ DE++A +LRK + K +ILAVNKCES + G S+FW+LG P +SA
Sbjct: 92 DGQMGPTSMDEQLAIFLRKEVLKKMPVILAVNKCESDKNGAYLASQFWNLGLGEPFAVSA 151
Query: 339 ISGTGTGELLDLVCSELKK-VEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRT 397
+ G GT E+++ + ++ K ++G +D EE N +AI+GRPNVGKSS++N + G +R
Sbjct: 152 LHGVGTAEVMEKMFDDIAKPLDGEDDTDEEIN----VAIIGRPNVGKSSLINTIFGSNRA 207
Query: 398 IVSPISGTTRDAIDTEF----TGPEG--QKFRLIDTAGIRKRAAIASSGSTTEALSVNRA 451
IVS ++GTTRD+ID + PEG +R +DTAGIR++ I E VNRA
Sbjct: 208 IVSDVAGTTRDSIDAIMERPSSDPEGLPTIYRFVDTAGIRRKGKIEFG---PEFFMVNRA 264
Query: 452 FRAIRRSDVVALVIEAMACITEQ 474
RAIRR+DVV LV++A A +TEQ
Sbjct: 265 LRAIRRADVVLLVLDATAGVTEQ 287
>gi|449947645|ref|ZP_21807534.1| GTP-binding protein EngA [Streptococcus mutans 11SSST2]
gi|449168375|gb|EMB71196.1| GTP-binding protein EngA [Streptococcus mutans 11SSST2]
Length = 436
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 185/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ +T ADE +A L + + K +ILAVNK ++P + +F++LG P P+S+ G
Sbjct: 93 KESITDADEYVAKILYRTH--KPVILAVNKVDNPEMR-SAIYDFYALGLGDPYPVSSAHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVDNLPA-----EAQEESSDIIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD+V
Sbjct: 205 VAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDIV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|421532161|ref|ZP_15978530.1| GTP-binding protein Der [Streptococcus agalactiae STIR-CD-17]
gi|403642669|gb|EJZ03495.1| GTP-binding protein Der [Streptococcus agalactiae STIR-CD-17]
Length = 436
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 186/316 (58%), Gaps = 48/316 (15%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+ E+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQADIAMTEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L K +K +ILAVNK ++P + +F+SLG P +S++
Sbjct: 92 GKEGVTDADEYVSRILYKT--NKPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYLLSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAI---AIVGRPNVGKSSILNALVGEDRT 397
G GTG++LD + L VEEEN P I +++GRPNVGKSS++NA++GEDR
Sbjct: 149 GIGTGDILDAIVENLP--------VEEENENPDIIRFSLIGRPNVGKSSLINAILGEDRV 200
Query: 398 IVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRR 457
I SP++GTTRDAIDT F +GQ++ +IDTAG+RK + + TE SV R+ RAI R
Sbjct: 201 IASPVAGTTRDAIDTNFVDSQGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDR 257
Query: 458 SDVVALVIEAMACITE 473
SDVV +VI A I E
Sbjct: 258 SDVVLMVINAEEGIRE 273
>gi|171780272|ref|ZP_02921176.1| hypothetical protein STRINF_02060 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281620|gb|EDT47055.1| ribosome biogenesis GTPase Der [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 437
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 185/312 (59%), Gaps = 41/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSKILYRT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L VE ED E I +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIVENLP-VEEEED---ENPDIIKFSLIGRPNVGKSSLINAILGEERVIASP 205
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDAIDT FT EGQ++ +IDTAG+RK + + TE SV R+ RAI RSD+V
Sbjct: 206 IAGTTRDAIDTNFTDSEGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDRSDIV 262
Query: 462 ALVIEAMACITE 473
+VI A I E
Sbjct: 263 LMVINAEEGIRE 274
>gi|16079341|ref|NP_390165.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str.
168]
gi|221310200|ref|ZP_03592047.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str.
168]
gi|221314523|ref|ZP_03596328.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221319445|ref|ZP_03600739.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221323721|ref|ZP_03605015.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str.
SMY]
gi|321311754|ref|YP_004204041.1| GTP-binding protein Der [Bacillus subtilis BSn5]
gi|402776542|ref|YP_006630486.1| GTPase essential for ribosome 50S subunitassembly [Bacillus
subtilis QB928]
gi|418032555|ref|ZP_12671038.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|430758465|ref|YP_007209181.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452915805|ref|ZP_21964431.1| ribosome-associated GTPase EngA [Bacillus subtilis MB73/2]
gi|1730915|sp|P50743.1|DER_BACSU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|1146219|gb|AAC83966.1| similar to Escherichia coli GTP-binding protein Era; putative
[Bacillus subtilis subsp. subtilis str. 168]
gi|2634702|emb|CAB14200.1| GTPase essential for ribosome 50S subunit assembly [Bacillus
subtilis subsp. subtilis str. 168]
gi|320018028|gb|ADV93014.1| GTP-binding protein Der [Bacillus subtilis BSn5]
gi|351471418|gb|EHA31539.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|402481723|gb|AFQ58232.1| GTPase essential for ribosome 50S subunitassembly [Bacillus
subtilis QB928]
gi|407959525|dbj|BAM52765.1| GTP-binding protein EngA [Bacillus subtilis BEST7613]
gi|407965101|dbj|BAM58340.1| GTP-binding protein EngA [Bacillus subtilis BEST7003]
gi|430022985|gb|AGA23591.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452116153|gb|EME06549.1| ribosome-associated GTPase EngA [Bacillus subtilis MB73/2]
Length = 436
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 191/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I +QA A++E+ VIIF+V+G+
Sbjct: 62 ----------------DIGDE--PFLAQ----------IRQQAEIAMDEADVIIFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L + K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 94 EGVTAADEEVAKILYRT--KKPVVLAVNKLDNTEMR-ANIYDFYSLGFGEPYPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K + T+ EE + ++GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVAEHFKNIPETK--YNEE--VIQFCLIGRPNVGKSSLVNAMLGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT FT + Q+F ++DTAG+RK+ + TTE SV RA +AI RS+VVA
Sbjct: 207 AGTTRDAVDTSFTYNQ-QEFVIVDTAGMRKKGKVY---ETTEKYSVLRALKAIDRSEVVA 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 33/174 (18%)
Query: 157 NVPE----HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
N+PE + + ++GRPNVGKS+L N ++G R IV + G TRD + + + E
Sbjct: 165 NIPETKYNEEVIQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTSFTYNQQE 224
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F++VDT G+ + + + E T + +V R A AI+
Sbjct: 225 FVIVDTAGM----RKKGKVYE---------------TTEKYSVLR--------ALKAIDR 257
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
S V+ ++DG+ G+ D+ IA + + K +++ VNK ++ K + EF
Sbjct: 258 SEVVAVVLDGEEGIIEQDKRIAGYAHE--AGKAVVIVVNKWDAVDKDESTMKEF 309
>gi|407978746|ref|ZP_11159573.1| GTP-binding protein Der [Bacillus sp. HYC-10]
gi|407414617|gb|EKF36252.1| GTP-binding protein Der [Bacillus sp. HYC-10]
Length = 436
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 191/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I QA A++E+ VIIF+V+G+
Sbjct: 62 ----------------DIGDE--PFLAQ----------IRHQAEIAMDEADVIIFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ADEE+A L + K ++LAVNK ++P V +F++LGF P PIS G
Sbjct: 94 DGVTSADEEVAKILYRT--KKPVVLAVNKLDNPEMR-SDVYDFYALGFGEPYPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K + T+ +EE + ++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GLGDLLDAVAEHFKHLPDTQ--YDEE--VVQFCLIGRPNVGKSSLVNAMLGEERVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT FT + + F ++DTAG+RK+ + TTE SV RA +AI RSDVVA
Sbjct: 207 AGTTRDAVDTMFTYNQ-RDFVIVDTAGMRKKGKVY---ETTEKYSVLRALKAIDRSDVVA 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ ++GRPNVGKS+L N ++G R IV + G TRD + + + +F++VDT G+
Sbjct: 177 QFCLIGRPNVGKSSLVNAMLGEERVIVSNIAGTTRDAVDTMFTYNQRDFVIVDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AI+ S V+ ++DG+
Sbjct: 234 -RKKGKVYE---------------TTEKYSVLR--------ALKAIDRSDVVAVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + K +++ VNK ++ K + EF
Sbjct: 270 GIIEQDKRIAGYAHE--AGKAVVIIVNKWDAVEKDERTMKEF 309
>gi|224476594|ref|YP_002634200.1| GTP-binding protein EngA [Staphylococcus carnosus subsp. carnosus
TM300]
gi|254783167|sp|B9DNV9.1|DER_STACT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|222421201|emb|CAL28015.1| putative GTP-binding protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 436
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 186/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------ELTDAPFQTQIRAQAEIAIDEADVIIFMVNQR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT DE IA L K +K ++LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 EGLTQTDEMIAQMLYKT--NKPVVLAVNKVDNPEMR-TDIYDFYALGFGEPFPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + K E + + ++++GRPNVGKSS++NA++GEDR IVS I
Sbjct: 151 GLGDLLDEVANNFKDEEDDD----YDEDTIKLSLIGRPNVGKSSLVNAILGEDRVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ E Q + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YEDQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+V++A I EQ
Sbjct: 263 VVLDAEEGIIEQ 274
>gi|377556030|ref|ZP_09785753.1| GTP-binding protein engA [Lactobacillus gastricus PS3]
gi|376168768|gb|EHS87496.1| GTP-binding protein engA [Lactobacillus gastricus PS3]
Length = 437
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/311 (43%), Positives = 187/311 (60%), Gaps = 42/311 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G +IV D PGVTRDR+Y W EF ++DTGG
Sbjct: 4 PIVAIVGRPNVGKSTLFNRIAGERISIVEDTPGVTRDRIYAHGDWLGKEFSMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + PL T+ I QA AI+E+ VI+ +V+ +
Sbjct: 61 -----------------IEISDQPLTTQ----------IREQAEVAIDEADVIVMVVNVE 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L +++ K ++LAVNK ++P + Q+ +F+SLG P P+S++ G
Sbjct: 94 NGVTDADEQVAKILYRSH--KPVVLAVNKVDNPERR-SQIFDFYSLGLGEPYPVSSVHGV 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + T+D + RI + +GRPNVGKSSI+NA++GEDR IVS I
Sbjct: 151 GIGDLLDEVIKHFPERSNTQD----DQRI-RFSFIGRPNVGKSSIVNAMLGEDRVIVSDI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+IDT F P+G +F ++DTAGI+K+ + + TE ++ R+ RAI SDVV
Sbjct: 206 AGTTRDSIDTNFKTPDGHEFTMVDTAGIKKKGKLYEN---TERYALMRSMRAIDDSDVVI 262
Query: 463 LVIEAMACITE 473
V+ A I E
Sbjct: 263 FVLNAEEGIRE 273
>gi|389573093|ref|ZP_10163169.1| ribosome-associated GTPase EngA [Bacillus sp. M 2-6]
gi|388427250|gb|EIL85059.1| ribosome-associated GTPase EngA [Bacillus sp. M 2-6]
Length = 436
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 191/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I QA A++E+ VIIF+V+G+
Sbjct: 62 ----------------DIGDE--PFLAQ----------IRHQAEIAMDEADVIIFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ADEE+A L + K ++LAVNK ++P V +F++LGF P PIS G
Sbjct: 94 DGVTSADEEVAKILYRT--KKPVVLAVNKLDNPEMR-SDVYDFYALGFGEPYPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K + T+ +EE + ++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GLGDLLDAVAEHFKNLPDTQ--YDEE--VVQFCLIGRPNVGKSSLVNAMLGEERVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT FT + + F ++DTAG+RK+ + TTE SV RA +AI RSDVVA
Sbjct: 207 AGTTRDAVDTMFTYNQ-RDFVIVDTAGMRKKGKVY---ETTEKYSVLRALKAIDRSDVVA 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ ++GRPNVGKS+L N ++G R IV + G TRD + + + +F++VDT G+
Sbjct: 177 QFCLIGRPNVGKSSLVNAMLGEERVIVSNIAGTTRDAVDTMFTYNQRDFVIVDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AI+ S V+ ++DG+
Sbjct: 234 -RKKGKVYE---------------TTEKYSVLR--------ALKAIDRSDVVAVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + K +++ VNK ++ K + EF
Sbjct: 270 GIIEQDKRIAGYAHE--AGKAVVIIVNKWDAVEKDERTMKEF 309
>gi|363890779|ref|ZP_09318084.1| ribosome-associated GTPase EngA [Eubacteriaceae bacterium CM5]
gi|361963609|gb|EHL16678.1| ribosome-associated GTPase EngA [Eubacteriaceae bacterium CM5]
Length = 440
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/310 (44%), Positives = 187/310 (60%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRLVG +IV D PGVTRDR++ W + F L+DTGG+
Sbjct: 5 VAIVGRPNVGKSTLFNRLVGERISIVEDTPGVTRDRIFADVSWLNYSFTLIDTGGI---E 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
N++ P M+ +QA AI+ + VI+F+VDG+AG
Sbjct: 62 TDTDNLI--------------------------PEMMRKQAQIAIDMADVIMFVVDGKAG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
L D E+AD LRK+ K +I+ VNK ++ R +F+ LGF + IS+ G G
Sbjct: 96 LVPQDFEVADLLRKS--KKPVIVIVNKVDNSRLP-DDYYDFYQLGFDNMYAISSTQGLGL 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G++LD + + K E+L+E E+ +AI+G+PN GKSSILNAL+GE+RTIVSPI+G
Sbjct: 153 GDMLDEIVALFPK----EELLEVEDNSIKVAIIGKPNAGKSSILNALIGEERTIVSPIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAID E G + IDTAGIRK+ I ++ E SV RA+ AI ++DVV +V
Sbjct: 209 TTRDAID-EKCNINGIDYTFIDTAGIRKKNKIYNN---IEKYSVLRAYSAIEKADVVLVV 264
Query: 465 IEAMACITEQ 474
I+A +TEQ
Sbjct: 265 IDATTMVTEQ 274
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 36/200 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PN GKS++ N L+G R IV G TRD + + ++ +DT G+
Sbjct: 177 KVAIIGKPNAGKSSILNALIGEERTIVSPIAGTTRDAIDEKCNINGIDYTFIDTAGIRKK 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+K NI + +V R A +AIE++ V++ ++D
Sbjct: 237 NKIYNNI-------------------EKYSVLR--------AYSAIEKADVVLVVIDATT 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSPL-PISA 338
+T D +IA + K +I+ VNK + +K + ++ SL + P+
Sbjct: 270 MVTEQDTKIAGLAHE--AGKCVIVVVNKWDLIQKETNTMRDYTVDVRNSLAYMQYAPVEF 327
Query: 339 ISGTGTGELLDLVCSELKKV 358
IS TG+ L+ + + KV
Sbjct: 328 ISAK-TGKRLNNIVELINKV 346
>gi|283770547|ref|ZP_06343439.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus H19]
gi|283460694|gb|EFC07784.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus H19]
Length = 436
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTYDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V S G E+ + ++I+GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GLGDLLDAVVSHF----GEEEEDPYDEDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ EGQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YEGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G +R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYEGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEQ--GKAVVIVVNKWDTVEKDSKTMKKF 309
>gi|257089874|ref|ZP_05584235.1| GTP-binding protein engA [Enterococcus faecalis CH188]
gi|312903296|ref|ZP_07762476.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0635]
gi|422689379|ref|ZP_16747491.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0630]
gi|256998686|gb|EEU85206.1| GTP-binding protein engA [Enterococcus faecalis CH188]
gi|310633172|gb|EFQ16455.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0635]
gi|315577718|gb|EFU89909.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0630]
Length = 436
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 183/314 (58%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYTTGEWLGREFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
+G E P M I+ QA AI+E+ VIIF+
Sbjct: 62 ----------------DLGDE--------------PFMDQIKHQAEIAIDEADVIIFVAS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L ++ +K +ILAVNK ++P + EF++LG P P+S
Sbjct: 92 GREGITDADELVAKILYRS--NKPVILAVNKVDNPEMR-NDIYEFYALGLGDPFPVSGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD ED E+ I +++GRPNVGKSS++NA++GEDR IVS
Sbjct: 149 GLGIGDVLDEAVKHFPNTSEEED----EDTI-KFSLIGRPNVGKSSLINAILGEDRVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F EGQKF +IDTAG+RKR + S TE SV RA RAI RSD+
Sbjct: 204 DIEGTTRDAIDTYFESEEGQKFLMIDTAGMRKRGKVYES---TEKYSVMRAMRAIERSDI 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 100/198 (50%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R IV D G TRD + Y S G+ +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIVSDIEGTTRDAIDTYFESEEGQ-KFLMIDTAGM- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + E +T + +V R A AIE S +++ +++
Sbjct: 234 ---RKRGKVYE---------------STEKYSVMR--------AMRAIERSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ +A + + + II+ VNK ++ +K + EF L ++P+
Sbjct: 268 EEGIREQDKRVAGYAHE--AGRGIIIVVNKWDTVKKDTNTMRDFEAEIRDEFQYLDYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L +L+
Sbjct: 326 IFVSALTKQRLNKLPELI 343
>gi|386758865|ref|YP_006232081.1| GTP-binding protein EngA [Bacillus sp. JS]
gi|384932147|gb|AFI28825.1| GTP-binding protein EngA [Bacillus sp. JS]
Length = 436
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 191/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I +QA A++E+ VI+F+V+G+
Sbjct: 62 ----------------DIGDE--PFLAQ----------IRQQAEIAMDEADVIVFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L + K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 94 EGVTAADEEVAKILYRT--KKPVVLAVNKLDNTEMR-ANIYDFYSLGFGEPYPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K + T+ EE + ++GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVAEHFKNIPETK--YNEE--VVQFCLIGRPNVGKSSLVNAMLGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT FT + Q+F ++DTAG+RK+ + TTE SV RA +AI RS+VVA
Sbjct: 207 AGTTRDAVDTSFTYNQ-QEFVIVDTAGMRKKGKVY---ETTEKYSVLRALKAIDRSEVVA 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 33/174 (18%)
Query: 157 NVPE----HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
N+PE + + ++GRPNVGKS+L N ++G R IV + G TRD + + + E
Sbjct: 165 NIPETKYNEEVVQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTSFTYNQQE 224
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F++VDT G+ + + + E T + +V R A AI+
Sbjct: 225 FVIVDTAGM----RKKGKVYE---------------TTEKYSVLR--------ALKAIDR 257
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
S V+ ++DG+ G+ D+ IA + + K +++ VNK ++ K + EF
Sbjct: 258 SEVVAVVLDGEEGIIEQDKRIAGYAHE--AGKAVVIVVNKWDAVDKDESTMKEF 309
>gi|295426288|ref|ZP_06818948.1| ribosome-associated GTPase EngA [Lactobacillus amylolyticus DSM
11664]
gi|295064027|gb|EFG54975.1| ribosome-associated GTPase EngA [Lactobacillus amylolyticus DSM
11664]
Length = 436
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 183/314 (58%), Gaps = 42/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR++ AIV DEPGVTRDR Y ++ W H F L+DTGG+
Sbjct: 2 VLPVVAIVGRPNVGKSTLFNRIIKERLAIVEDEPGVTRDRNYAQAEWMGHNFDLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
ED ++ I QA AI+E+ VI+ L
Sbjct: 62 ---------TWED---------------------GKIEEEIRAQAEIAIDEADVIVMLCS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+T DE +A L + K IILA+NK ++P +V +F+SLG P+P+S
Sbjct: 92 VVNGVTDLDERVAQLLYRT--KKPIILAINKADNPELR-AEVYDFYSLGLGDPIPVSGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG G+LLD + S+ + +L +++ + +++GRPNVGKSSI+N L+GE R IV+
Sbjct: 149 GTGIGDLLDKIVSKFPR-----ELDKKDKDTISFSVIGRPNVGKSSIVNKLLGEKRVIVA 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
GTTRDAIDT F G +G KFRLIDTAGIR+R + TE SV RA AI RSDV
Sbjct: 204 NQEGTTRDAIDTPFIGKDGTKFRLIDTAGIRRRGKVYEK---TEKYSVMRALSAIDRSDV 260
Query: 461 VALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 261 ALLVLDASTGIREQ 274
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 45/208 (21%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH--EFMLVDTGGVLNV 224
+++GRPNVGKS++ N+L+G R IV ++ G TRD + F G+ +F L+DT G+
Sbjct: 178 SVIGRPNVGKSSIVNKLLGEKRVIVANQEGTTRDAI-DTPFIGKDGTKFRLIDTAGI--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A +AI+ S V + ++D
Sbjct: 234 -RRRGKVYE---------------KTEKYSVMR--------ALSAIDRSDVALLVLDAST 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPR------KGIMQV--SEFWSLGFSP-LP 335
G+ D+ +A + + +I+ VNK + P+ K QV EF L ++P L
Sbjct: 270 GIREQDKHVAGYAHD--AGRGLIIVVNKWDIPKKDSGSGKDFEQVIRQEFQYLDYAPILF 327
Query: 336 ISAISGTGTGELLDLVCSELKKVEGTED 363
+SA TG+ LD + +K+V E+
Sbjct: 328 VSA----KTGQRLDQIPEIVKEVYKNEN 351
>gi|182418977|ref|ZP_02950233.1| GTP-binding protein EngA [Clostridium butyricum 5521]
gi|237668464|ref|ZP_04528448.1| ribosome-associated GTPase EngA [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182377260|gb|EDT74828.1| GTP-binding protein EngA [Clostridium butyricum 5521]
gi|237656812|gb|EEP54368.1| ribosome-associated GTPase EngA [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 438
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 185/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL G +IV D PGVTRDR+Y + W H F ++DTGG+
Sbjct: 4 PIVAMVGRPNVGKSTLFNRLAGKRISIVQDTPGVTRDRVYAEAEWLTHTFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P D+ + + RQA AIE + VI+F+VDG+
Sbjct: 62 ----EPE-RNDIIV----------------------QQMRRQANIAIETADVIVFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD E+A LRK+ K ++L VNK +S ++ EF++LG P+ ISA G
Sbjct: 95 EGLTAADHEVATMLRKS--KKPVVLVVNKVDSLKEE-DNAWEFYNLGIGDPITISASQGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V +D E+ IA++G+PNVGKSS++N L+GEDR IVS +
Sbjct: 152 GLGDMLDRVVENFDSSIYEQD----EDEYIRIAMIGKPNVGKSSLINKLLGEDRVIVSEV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAID+E EG KF LIDTAG+R+++ + E SV R + AI RSDV
Sbjct: 208 AGTTRDAIDSELETEEG-KFILIDTAGLRRKSKVKEE---IERYSVVRTYAAIERSDVCI 263
Query: 463 LVIEAMACITEQ 474
L+I+A ITEQ
Sbjct: 264 LMIDAQEGITEQ 275
>gi|116333425|ref|YP_794952.1| GTP-binding protein EngA [Lactobacillus brevis ATCC 367]
gi|122269888|sp|Q03SA1.1|DER_LACBA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|116098772|gb|ABJ63921.1| Predicted GTPase [Lactobacillus brevis ATCC 367]
Length = 435
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 190/314 (60%), Gaps = 47/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G +IV D PGVTRDR+Y R+ W EF ++DTGG
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGERISIVEDTPGVTRDRIYSRAEWLGTEFRMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I M P T+ I +QA AI+E+ VI+F+V
Sbjct: 61 -----------------IDMGDEPFLTQ----------ITQQAEIAIDEADVIVFIVSAP 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAIS 340
G+T ADE++A L + DK +ILAVNK ++P R+ I +F+SLGF P P+S +
Sbjct: 94 EGITDADEKVAKILYR--ADKPVILAVNKADNPEVRESIY---DFYSLGFGDPYPVSGVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G+LLD V E + +G +++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGLGDLLDAVVKEFPEKDGA----PKDDSI-RFSLIGRPNVGKSSLVNAMLGEERVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I+GTTRDAIDT+F + KF ++DTAGIRKR + + TE SV RA RAI SDV
Sbjct: 204 NIAGTTRDAIDTKFVA-DDTKFTMVDTAGIRKRGKVYEN---TERYSVMRAMRAIDDSDV 259
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 260 VLVVLNAEEGIREQ 273
>gi|421150492|ref|ZP_15610148.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|394329882|gb|EJE55984.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
Newbould 305]
Length = 436
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFFSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V S G E+ + ++I+GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GLGDLLDAVVSHF----GEEEEDPYDEDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
>gi|414564722|ref|YP_006043683.1| GTP-binding protein EngA [Streptococcus equi subsp. zooepidemicus
ATCC 35246]
gi|338847787|gb|AEJ25999.1| GTP-binding protein EngA [Streptococcus equi subsp. zooepidemicus
ATCC 35246]
Length = 446
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/307 (42%), Positives = 185/307 (60%), Gaps = 42/307 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 12 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRQFSLIDTGGI 71
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A++E+ VI+F+V
Sbjct: 72 DDVD------------------------------APFMEQIKHQAHIAMDEADVIVFVVS 101
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++
Sbjct: 102 GKEGVTDADEYVSKLLYRT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPFPVSSVH 158
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E++VE ++ I +++GRPNVGKSS++NA++GE+R I S
Sbjct: 159 GIGTGDVLDAIIDNLP----VEEIVENDDVI-RFSLIGRPNVGKSSLINAILGEERVIAS 213
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT GQ + +IDTAG+RK + + TE SV RA RAI RSD+
Sbjct: 214 PVAGTTRDAIDTSFTDESGQAYTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDI 270
Query: 461 VALVIEA 467
V +VI A
Sbjct: 271 VLMVINA 277
>gi|255975864|ref|ZP_05426450.1| GTP-binding protein engA [Enterococcus faecalis T2]
gi|256961938|ref|ZP_05566109.1| GTP-binding protein engA [Enterococcus faecalis Merz96]
gi|257082561|ref|ZP_05576922.1| GTP-binding protein engA [Enterococcus faecalis E1Sol]
gi|293383006|ref|ZP_06628924.1| ribosome-associated GTPase EngA [Enterococcus faecalis R712]
gi|293389505|ref|ZP_06633962.1| ribosome-associated GTPase EngA [Enterococcus faecalis S613]
gi|307278085|ref|ZP_07559169.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0860]
gi|312907523|ref|ZP_07766514.1| ribosome-associated GTPase EngA [Enterococcus faecalis DAPTO 512]
gi|312910141|ref|ZP_07768988.1| ribosome-associated GTPase EngA [Enterococcus faecalis DAPTO 516]
gi|422699235|ref|ZP_16757108.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX1346]
gi|255968736|gb|EET99358.1| GTP-binding protein engA [Enterococcus faecalis T2]
gi|256952434|gb|EEU69066.1| GTP-binding protein engA [Enterococcus faecalis Merz96]
gi|256990591|gb|EEU77893.1| GTP-binding protein engA [Enterococcus faecalis E1Sol]
gi|291079671|gb|EFE17035.1| ribosome-associated GTPase EngA [Enterococcus faecalis R712]
gi|291081122|gb|EFE18085.1| ribosome-associated GTPase EngA [Enterococcus faecalis S613]
gi|306505482|gb|EFM74668.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0860]
gi|310626551|gb|EFQ09834.1| ribosome-associated GTPase EngA [Enterococcus faecalis DAPTO 512]
gi|311289414|gb|EFQ67970.1| ribosome-associated GTPase EngA [Enterococcus faecalis DAPTO 516]
gi|315172323|gb|EFU16340.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX1346]
Length = 436
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 183/314 (58%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYTTGEWLGREFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
+G E P M I+ QA AI+E+ VIIF+
Sbjct: 62 ----------------DLGDE--------------PFMDQIKHQAEIAIDEADVIIFVAS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L ++ +K +ILAVNK ++P + EF++LG P P+S
Sbjct: 92 GREGITDADELVAKILYRS--NKPVILAVNKVDNPEMR-NDIYEFYALGLGDPFPVSGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD ED E+ I +++GRPNVGKSS++NA++GEDR IVS
Sbjct: 149 GLGIGDVLDEAVKHFPNTSEEED----EDTI-KFSLIGRPNVGKSSLINAILGEDRVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F EGQKF +IDTAG+RKR + S TE SV RA RAI RSD+
Sbjct: 204 DIEGTTRDAIDTYFESEEGQKFLMIDTAGMRKRGKVYES---TEKYSVMRAMRAIERSDI 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 100/198 (50%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R IV D G TRD + Y S G+ +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIVSDIEGTTRDAIDTYFESEEGQ-KFLMIDTAGM- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + E +T + +V R A AIE S +++ +++
Sbjct: 234 ---RKRGKVYE---------------STEKYSVMR--------AMRAIERSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ +A + + + II+ VNK ++ +K + EF L ++P+
Sbjct: 268 EEGIREQDKRVAGYAHE--AGRGIIIVVNKWDTVKKDTNTMRDFEAEIRDEFQYLDYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L +L+
Sbjct: 326 IFVSALTKQRLNKLPELI 343
>gi|403069993|ref|ZP_10911325.1| GTP-binding protein Der [Oceanobacillus sp. Ndiop]
Length = 436
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/310 (46%), Positives = 187/310 (60%), Gaps = 42/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNRLVG +IV D PGVTRDR+Y + W +F L+DTGG+
Sbjct: 6 VAIVGRPNVGKSTIFNRLVGERISIVEDIPGVTRDRIYASADWLNQDFNLIDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
IG E + + R+ QA AI+E+ VIIF+++G+ G
Sbjct: 62 --------------EIGDEPLLVQMRQ------------QAEIAIDEADVIIFILNGKEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+TAADEE+A L K+ +K ++LA+NK ++P + E++SLGF P PIS G G
Sbjct: 96 ITAADEEVAKLLFKS--NKSVVLAINKMDNPEMR-ETIYEYYSLGFGEPFPISGSHGLGL 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V E EE+ I +++GRPNVGKSS++NAL+ E+R IVS I G
Sbjct: 153 GDLLDEVVKHFPVFAEEE---AEEDTI-YFSLIGRPNVGKSSLVNALLNEERVIVSEIEG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT + Q F +IDTAG+RKR + TTE SV RA RAI RSDVV ++
Sbjct: 209 TTRDAIDTRLH-KDDQDFIIIDTAGMRKRGKVY---ETTEKYSVLRALRAIERSDVVLVL 264
Query: 465 IEAMACITEQ 474
I+A I EQ
Sbjct: 265 IDAETGIREQ 274
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPE--GQKFRLIDT 427
R +AIVGRPNVGKS+I N LVGE +IV I G TRD I + + Q F LIDT
Sbjct: 2 RKSVVAIVGRPNVGKSTIFNRLVGERISIVEDIPGVTRDRI---YASADWLNQDFNLIDT 58
Query: 428 AGI 430
GI
Sbjct: 59 GGI 61
>gi|414145478|pdb|4DCS|A Chain A, Crystal Structure Of B. Subtilis Enga In Complex With
Sulfate Ion And Gdp
gi|414145479|pdb|4DCT|A Chain A, Crystal Structure Of B. Subtilis Enga In Complex With
Half-Occupacy Gdp
gi|414145480|pdb|4DCU|A Chain A, Crystal Structure Of B. Subtilis Enga In Complex With Gdp
gi|414145481|pdb|4DCV|A Chain A, Crystal Structure Of B. Subtilis Enga In Complex With
Gmppcp
Length = 456
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 191/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 24 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI-- 81
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I +QA A++E+ VIIF+V+G+
Sbjct: 82 ----------------DIGDE--PFLAQ----------IRQQAEIAMDEADVIIFMVNGR 113
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L + K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 114 EGVTAADEEVAKILYRT--KKPVVLAVNKLDNTEMR-ANIYDFYSLGFGEPYPISGTHGL 170
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K + T+ EE + ++GRPNVGKSS++NA++GE+R IVS +
Sbjct: 171 GLGDLLDAVAEHFKNIPETK--YNEE--VIQFCLIGRPNVGKSSLVNAMLGEERVIVSNV 226
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT FT + Q+F ++DTAG+RK+ + TTE SV RA +AI RS+VVA
Sbjct: 227 AGTTRDAVDTSFTYNQ-QEFVIVDTAGMRKKGKVY---ETTEKYSVLRALKAIDRSEVVA 282
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 283 VVLDGEEGIIEQ 294
>gi|407477495|ref|YP_006791372.1| GTPase Der [Exiguobacterium antarcticum B7]
gi|407061574|gb|AFS70764.1| GTPase Der [Exiguobacterium antarcticum B7]
Length = 436
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 198/314 (63%), Gaps = 44/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P VAIVGRPN+GKS +FNR++G +IV D+PGVTRDR+YG W F L+DTGG+
Sbjct: 3 IPVVAIVGRPNIGKSTIFNRVIGDRVSIVEDKPGVTRDRIYGTGEWLNRHFHLIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+G E PL M+ QA AI+E+ VIIF+V+G
Sbjct: 62 -----------------EVGDE--PLL----------QMMRHQAELAIDEADVIIFMVNG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSEFWSLGFSPL-PISAIS 340
+ G+T+ADEE+A+ L ++ +K +++AVNK ++ + +M EF+SLGF L PIS
Sbjct: 93 REGITSADEEVANMLFRS--NKPVVIAVNKVDNFEMRDLMY--EFYSLGFGDLYPISGTH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD V L+ E++ +EN I A+VGRPNVGKSS+ N+++GE+R IVS
Sbjct: 149 GLGLGDMLDRV---LELAPDKEEIEYDENTI-KFALVGRPNVGKSSMTNSILGEERVIVS 204
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
++GTTRDAIDT F+ E Q++ +IDTAG+RKR + S TE SV RA +AI R+DV
Sbjct: 205 SVAGTTRDAIDTPFSRDE-QEYVIIDTAGMRKRGKVYES---TERFSVMRAQKAIERADV 260
Query: 461 VALVIEAMACITEQ 474
V +V++ I EQ
Sbjct: 261 VCVVLDGEEGIIEQ 274
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ A+VGRPNVGKS++ N ++G R IV G TRD + E E++++DT G+
Sbjct: 177 KFALVGRPNVGKSSMTNSILGEERVIVSSVAGTTRDAIDTPFSRDEQEYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T +V R A AIE + V+ ++DG+
Sbjct: 234 -RKRGKVYE---------------STERFSVMR--------AQKAIERADVVCVVLDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+++A + + + I++ VNK ++ K
Sbjct: 270 GIIEQDKKVAGYAHE--AGRAIVIVVNKWDAVEK 301
>gi|257873989|ref|ZP_05653642.1| GTP-binding protein engA [Enterococcus casseliflavus EC10]
gi|257808153|gb|EEV36975.1| GTP-binding protein engA [Enterococcus casseliflavus EC10]
Length = 436
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/314 (44%), Positives = 183/314 (58%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYATGEWLGREFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
DL+ P M I+ QA AI+E+ VI+F+
Sbjct: 62 ----------DLS--------------------DEPFMDQIKHQAEIAIDEADVIVFITS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+ G+T ADE +A L K+ +K +ILAVNK ++P + EF+ LG P PIS
Sbjct: 92 AREGVTDADELVARLLYKS--NKPVILAVNKVDNPEMR-TDIYEFYGLGLGDPYPISGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD T + EE++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGIGDVLDEAVKHF-----TNEAEEEDDSIIKFSLIGRPNVGKSSLINAILGEERVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT FT GQ+F +IDTAG+RK+ + S TE SV RA RAI RSDV
Sbjct: 204 DIEGTTRDAIDTHFTSESGQEFTMIDTAGMRKKGKVYES---TEKYSVMRAMRAIERSDV 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R IV D G TRD + F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIVSDIEGTTRDAI-DTHFTSESGQEFTMIDTAGM- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + E +T + +V R A AIE S V++ +++
Sbjct: 234 ---RKKGKVYE---------------STEKYSVMR--------AMRAIERSDVVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ IA + + + II+ VNK ++ +K + EF L ++P+
Sbjct: 268 EEGIREQDKRIAGYAHE--AGRGIIIVVNKWDTLKKETNTMRDFEEEIRDEFQYLDYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L L+
Sbjct: 326 IFVSAVTKQRLNKLPQLI 343
>gi|229545835|ref|ZP_04434560.1| GTP-binding protein EngA [Enterococcus faecalis TX1322]
gi|229550027|ref|ZP_04438752.1| GTP-binding protein EngA [Enterococcus faecalis ATCC 29200]
gi|255972808|ref|ZP_05423394.1| GTP-binding protein engA [Enterococcus faecalis T1]
gi|256619052|ref|ZP_05475898.1| GTP-binding protein engA [Enterococcus faecalis ATCC 4200]
gi|256762478|ref|ZP_05503058.1| GTP-binding protein engA [Enterococcus faecalis T3]
gi|256853114|ref|ZP_05558484.1| GTP-binding protein engA [Enterococcus faecalis T8]
gi|256958969|ref|ZP_05563140.1| GTP-binding protein engA [Enterococcus faecalis DS5]
gi|256965136|ref|ZP_05569307.1| GTP-binding protein engA [Enterococcus faecalis HIP11704]
gi|257079000|ref|ZP_05573361.1| GTP-binding protein engA [Enterococcus faecalis JH1]
gi|257085194|ref|ZP_05579555.1| GTP-binding protein engA [Enterococcus faecalis Fly1]
gi|257086755|ref|ZP_05581116.1| GTP-binding protein engA [Enterococcus faecalis D6]
gi|257416082|ref|ZP_05593076.1| GTP-binding protein engA [Enterococcus faecalis ARO1/DG]
gi|257422630|ref|ZP_05599620.1| GTP-binding protein engA [Enterococcus faecalis X98]
gi|294781352|ref|ZP_06746695.1| ribosome-associated GTPase EngA [Enterococcus faecalis PC1.1]
gi|300861220|ref|ZP_07107307.1| ribosome-associated GTPase EngA [Enterococcus faecalis TUSoD Ef11]
gi|307271029|ref|ZP_07552312.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX4248]
gi|307273236|ref|ZP_07554482.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0855]
gi|307274973|ref|ZP_07556136.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX2134]
gi|307289094|ref|ZP_07569050.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0109]
gi|312900749|ref|ZP_07760046.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0470]
gi|312951482|ref|ZP_07770378.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0102]
gi|384513232|ref|YP_005708325.1| ribosome-associated GTPase EngA [Enterococcus faecalis OG1RF]
gi|384518579|ref|YP_005705884.1| small GTP-binding domain protein [Enterococcus faecalis 62]
gi|397699869|ref|YP_006537657.1| small GTP-binding domain protein [Enterococcus faecalis D32]
gi|422686001|ref|ZP_16744214.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX4000]
gi|422693036|ref|ZP_16751051.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0031]
gi|422694970|ref|ZP_16752958.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX4244]
gi|422701743|ref|ZP_16759583.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX1342]
gi|422704462|ref|ZP_16762272.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX1302]
gi|422706684|ref|ZP_16764382.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0043]
gi|422708459|ref|ZP_16765987.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0027]
gi|422718909|ref|ZP_16775560.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0017]
gi|422722532|ref|ZP_16779082.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX2137]
gi|422727035|ref|ZP_16783478.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0312]
gi|422733591|ref|ZP_16789893.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0645]
gi|422734324|ref|ZP_16790618.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX1341]
gi|422739688|ref|ZP_16794861.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX2141]
gi|424673232|ref|ZP_18110175.1| ribosome biogenesis GTPase Der [Enterococcus faecalis 599]
gi|424761330|ref|ZP_18188912.1| ribosome biogenesis GTPase Der [Enterococcus faecalis R508]
gi|428766987|ref|YP_007153098.1| GTP-binding protein engA [Enterococcus faecalis str. Symbioflor 1]
gi|430361008|ref|ZP_19426504.1| GTP-binding protein EngA [Enterococcus faecalis OG1X]
gi|430367319|ref|ZP_19427837.1| GTP-binding protein EngA [Enterococcus faecalis M7]
gi|229304833|gb|EEN70829.1| GTP-binding protein EngA [Enterococcus faecalis ATCC 29200]
gi|229309034|gb|EEN75021.1| GTP-binding protein EngA [Enterococcus faecalis TX1322]
gi|255963826|gb|EET96302.1| GTP-binding protein engA [Enterococcus faecalis T1]
gi|256598579|gb|EEU17755.1| GTP-binding protein engA [Enterococcus faecalis ATCC 4200]
gi|256683729|gb|EEU23424.1| GTP-binding protein engA [Enterococcus faecalis T3]
gi|256711573|gb|EEU26611.1| GTP-binding protein engA [Enterococcus faecalis T8]
gi|256949465|gb|EEU66097.1| GTP-binding protein engA [Enterococcus faecalis DS5]
gi|256955632|gb|EEU72264.1| GTP-binding protein engA [Enterococcus faecalis HIP11704]
gi|256987030|gb|EEU74332.1| GTP-binding protein engA [Enterococcus faecalis JH1]
gi|256993224|gb|EEU80526.1| GTP-binding protein engA [Enterococcus faecalis Fly1]
gi|256994785|gb|EEU82087.1| GTP-binding protein engA [Enterococcus faecalis D6]
gi|257157910|gb|EEU87870.1| GTP-binding protein engA [Enterococcus faecalis ARO1/DG]
gi|257164454|gb|EEU94414.1| GTP-binding protein engA [Enterococcus faecalis X98]
gi|294451582|gb|EFG20041.1| ribosome-associated GTPase EngA [Enterococcus faecalis PC1.1]
gi|295112973|emb|CBL31610.1| ribosome-associated GTPase EngA [Enterococcus sp. 7L76]
gi|300850259|gb|EFK78009.1| ribosome-associated GTPase EngA [Enterococcus faecalis TUSoD Ef11]
gi|306499803|gb|EFM69164.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0109]
gi|306508421|gb|EFM77528.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX2134]
gi|306510221|gb|EFM79245.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0855]
gi|306512527|gb|EFM81176.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX4248]
gi|310630448|gb|EFQ13731.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0102]
gi|311292230|gb|EFQ70786.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0470]
gi|315027277|gb|EFT39209.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX2137]
gi|315029396|gb|EFT41328.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX4000]
gi|315033958|gb|EFT45890.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0017]
gi|315036967|gb|EFT48899.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0027]
gi|315144428|gb|EFT88444.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX2141]
gi|315147253|gb|EFT91269.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX4244]
gi|315152495|gb|EFT96511.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0031]
gi|315155773|gb|EFT99789.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0043]
gi|315158060|gb|EFU02077.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0312]
gi|315160456|gb|EFU04473.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0645]
gi|315164003|gb|EFU08020.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX1302]
gi|315169046|gb|EFU13063.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX1341]
gi|315169716|gb|EFU13733.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX1342]
gi|323480712|gb|ADX80151.1| small GTP-binding domain protein [Enterococcus faecalis 62]
gi|327535121|gb|AEA93955.1| ribosome-associated GTPase EngA [Enterococcus faecalis OG1RF]
gi|397336508|gb|AFO44180.1| small GTP-binding domain protein [Enterococcus faecalis D32]
gi|402353042|gb|EJU87878.1| ribosome biogenesis GTPase Der [Enterococcus faecalis 599]
gi|402402314|gb|EJV35035.1| ribosome biogenesis GTPase Der [Enterococcus faecalis R508]
gi|427185160|emb|CCO72384.1| GTP-binding protein engA [Enterococcus faecalis str. Symbioflor 1]
gi|429512664|gb|ELA02265.1| GTP-binding protein EngA [Enterococcus faecalis OG1X]
gi|429516669|gb|ELA06149.1| GTP-binding protein EngA [Enterococcus faecalis M7]
Length = 436
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 183/314 (58%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYTTGEWLGREFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
+G E P M I+ QA AI+E+ VIIF+
Sbjct: 62 ----------------DLGDE--------------PFMDQIKHQAEIAIDEADVIIFVAS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L ++ +K +ILAVNK ++P + EF++LG P P+S
Sbjct: 92 GREGITDADELVAKILYRS--NKPVILAVNKVDNPEMR-NDIYEFYALGLGDPFPVSGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD ED E+ I +++GRPNVGKSS++NA++GEDR IVS
Sbjct: 149 GLGIGDVLDEAVKHFPNTSEEED----EDTI-KFSLIGRPNVGKSSLINAILGEDRVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F EGQKF +IDTAG+RKR + S TE SV RA RAI RSD+
Sbjct: 204 DIEGTTRDAIDTYFESEEGQKFLMIDTAGMRKRGKVYES---TEKYSVMRAMRAIERSDI 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 100/198 (50%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R IV D G TRD + Y S G+ +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIVSDIEGTTRDAIDTYFESEEGQ-KFLMIDTAGM- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + E +T + +V R A AIE S +++ +++
Sbjct: 234 ---RKRGKVYE---------------STEKYSVMR--------AMRAIERSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ +A + + + II+ VNK ++ +K + EF L ++P+
Sbjct: 268 EEGIREQDKRVAGYAHE--AGRGIIIVVNKWDTVKKDTNTMRDFEAEIRDEFQYLDYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L +L+
Sbjct: 326 IFVSALTKQRLNKLPELI 343
>gi|307292007|ref|ZP_07571876.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0411]
gi|306497005|gb|EFM66553.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0411]
Length = 436
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 183/314 (58%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYTTGEWLGREFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
+G E P M I+ QA AI+E+ VIIF+
Sbjct: 62 ----------------DLGDE--------------PFMDQIKHQAEIAIDEADVIIFVAS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L ++ +K +ILAVNK ++P + EF++LG P P+S
Sbjct: 92 GREGITDADELVAKILYRS--NKPVILAVNKVDNPEMR-NDIYEFYALGLGDPFPVSGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD ED E+ I +++GRPNVGKSS++NA++GEDR IVS
Sbjct: 149 GLGIGDVLDEAVKHFPNTSEEED----EDTI-KFSLIGRPNVGKSSLINAILGEDRVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F EGQKF +IDTAG+RKR + S TE SV RA RAI RSD+
Sbjct: 204 DIEGTTRDAIDTYFESEEGQKFLMIDTAGMRKRGKVYES---TEKYSVMRAMRAIERSDI 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 100/198 (50%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R IV D G TRD + Y S G+ +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIVSDIEGTTRDAIDTYFESEEGQ-KFLMIDTAGM- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + E +T + +V R A AIE S +++ +++
Sbjct: 234 ---RKRGKVYE---------------STEKYSVMR--------AMRAIERSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ +A + + + II+ VNK ++ +K + EF L ++P+
Sbjct: 268 EEGIREQDKRVAGYAHE--AGRGIIIVVNKWDTVKKDTNTMRDFEAEIRDEFQYLDYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L +L+
Sbjct: 326 IFVSALTKQRLNKLPELI 343
>gi|433462992|ref|ZP_20420560.1| GTP-binding protein Der [Halobacillus sp. BAB-2008]
gi|432188129|gb|ELK45347.1| GTP-binding protein Der [Halobacillus sp. BAB-2008]
Length = 436
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 141/311 (45%), Positives = 191/311 (61%), Gaps = 44/311 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS +FNRLVG +IV D PGVTRDR+Y + W F ++DTGG+
Sbjct: 6 IAIVGRPNVGKSTIFNRLVGERISIVEDTPGVTRDRIYAEAEWLTTRFNVIDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E PL + A QA AI+E+ VI+F+V+G+ G
Sbjct: 62 --------------ELGDE--PLLVQMRA----------QAQVAIDEADVIVFMVNGRDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T ADEE+A L K+ +K ++LAVNK ++P + EF+SLGF P PIS G G
Sbjct: 96 ITGADEEVAKLLFKS--NKPVVLAVNKVDNPEMR-ENIYEFYSLGFGEPFPISGTHGLGL 152
Query: 345 GELLDLVCSELKKVEGTEDLVEE-ENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
G++LD V S E ++EE ++ +++GRPNVGKSS++N+L+G++R IVS I+
Sbjct: 153 GDMLDEVVSHF-----PEKVMEEVDDETIRFSLIGRPNVGKSSLVNSLLGQERVIVSNIA 207
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRDAIDT FT + Q F +IDTAG+RKR + S TE S+ RA +AI RSDVV
Sbjct: 208 GTTRDAIDTPFT-KDDQDFVIIDTAGMRKRGKVYES---TERYSIMRALKAIERSDVVLT 263
Query: 464 VIEAMACITEQ 474
+I+A I EQ
Sbjct: 264 LIDADTGIHEQ 274
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N L+G R IV + G TRD + + +F+++DT G+
Sbjct: 177 RFSLIGRPNVGKSSLVNSLLGQERVIVSNIAGTTRDAIDTPFTKDDQDFVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T ++ R A AIE S V++ L+D
Sbjct: 234 -RKRGKVYE---------------STERYSIMR--------ALKAIERSDVVLTLIDADT 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVS-----EFWSLGFSPL 334
G+ D++IA + + K +++ VNK E+ K + + +F L ++P+
Sbjct: 270 GIHEQDKKIAGYAHE--AGKAVVIVVNKWDTVETEEKTMKEFEDKVRDQFRFLDYAPI 325
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAG 429
R IAIVGRPNVGKS+I N LVGE +IV G TRD I E +F +IDT G
Sbjct: 2 RKSVIAIVGRPNVGKSTIFNRLVGERISIVEDTPGVTRDRIYAEAEWLT-TRFNVIDTGG 60
Query: 430 I 430
I
Sbjct: 61 I 61
>gi|312131342|ref|YP_003998682.1| ribosome-associated GTPase enga [Leadbetterella byssophila DSM
17132]
gi|311907888|gb|ADQ18329.1| ribosome-associated GTPase EngA [Leadbetterella byssophila DSM
17132]
Length = 437
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 184/313 (58%), Gaps = 45/313 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL+ AI ++PGVTRDR YG +FW + F L+DTGG +
Sbjct: 5 VAIVGRPNVGKSTLFNRLIEERVAITDNQPGVTRDRHYGNAFWLKKHFTLIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G + T E A I Q AIEE+ VI+F+VD + G
Sbjct: 62 ---------------VGSDD----TFEEA-------IRSQVELAIEEATVILFVVDAKDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP--LPISAISGTG 343
LT DEE AD LR++ FI+ NK E+ + + SEF+ +G + PISAI G+G
Sbjct: 96 LTELDEEFADVLRRSKKPVFIV--ANKAETFERANLTASEFYGMGLNSEVYPISAIDGSG 153
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENR--IPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TGELLD C L D EE N +P IAI+GRPN GKSS LNAL+G+DR+IV+
Sbjct: 154 TGELLDAFCEHL------SDEKEEANEEGVPRIAILGRPNAGKSSFLNALLGKDRSIVTD 207
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDAIDT + G+ F L DTAGIRK+A + E SV R+ +A+ +SDV
Sbjct: 208 IAGTTRDAIDTRYK-MFGKDFILTDTAGIRKKAKV---NEDLEFYSVLRSIKALDKSDVC 263
Query: 462 ALVIEAMACITEQ 474
++++A + Q
Sbjct: 264 IILLDATKGLESQ 276
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 29/159 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR+AI+GRPN GKS+ N L+G +R+IV D G TRD + R +F+L DT
Sbjct: 174 EEGVPRIAILGRPNAGKSSFLNALLGKDRSIVTDIAGTTRDAIDTRYKMFGKDFILTDTA 233
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ A+++S V I L
Sbjct: 234 GI----RKKAKVNEDLEFYSVL-----------------------RSIKALDKSDVCIIL 266
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
+D GL + D I+ + + K I+L VNK ++ K
Sbjct: 267 LDATKGLESQD--ISIIAQAHNAKKGIVLMVNKWDALEK 303
>gi|329770413|ref|ZP_08261795.1| GTP-binding protein engA [Gemella sanguinis M325]
gi|328836536|gb|EGF86196.1| GTP-binding protein engA [Gemella sanguinis M325]
Length = 435
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 189/312 (60%), Gaps = 43/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS +FN+++G +IV D GVTRDR+Y ++ W + F ++DTGG
Sbjct: 4 PTVAIIGRPNVGKSTIFNKIIGDRLSIVEDVAGVTRDRIYSKAEWLNYSFFMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I +E P + I QA AI+E+ VIIFL +G+
Sbjct: 61 -----------------IELEDTPFQKQ----------IRAQAELAIDEADVIIFLTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ DEE+A L K DK ++LAVNK ++ M + +F+SLGF P PIS G
Sbjct: 94 DGVTSDDEEVAKLLYKT--DKPVVLAVNKIDNFDMNHM-IYDFYSLGFGDPFPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD VC K +E ED EE+ +I +++GRPNVGKSS++N ++G++R I S I
Sbjct: 151 GIGDLLDEVCKNFKVLE--ED--EEDEKI-RFSLIGRPNVGKSSLINTILGKERVIASEI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT+F G ++ +IDTAGIRKR + + E SV R+ +AI RSDVV
Sbjct: 206 AGTTRDAIDTDFK-YNGDEYVVIDTAGIRKRGKVYEN---CEKYSVLRSLKAIERSDVVL 261
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 262 VVLNAEEGIIEQ 273
>gi|306834169|ref|ZP_07467289.1| ribosome-associated GTPase EngA [Streptococcus bovis ATCC 700338]
gi|304423742|gb|EFM26888.1| ribosome-associated GTPase EngA [Streptococcus bovis ATCC 700338]
Length = 436
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 136/315 (43%), Positives = 186/315 (59%), Gaps = 48/315 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSKILYRT--NKPVILVVNKVDNPEMR-SDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAI---AIVGRPNVGKSSILNALVGEDRTI 398
GTG++LD + L VEEE+ P I +++GRPNVGKSS++NA++GE+R I
Sbjct: 150 IGTGDVLDAIVENLP--------VEEEDENPDIIKFSLIGRPNVGKSSLINAILGEERVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
SPI+GTTRDAIDT FT +GQ++ +IDTAG+RK + + TE SV R+ RAI RS
Sbjct: 202 ASPIAGTTRDAIDTNFTDSDGQEYTMIDTAGMRKSGKVYEN---TEKYSVMRSMRAIDRS 258
Query: 459 DVVALVIEAMACITE 473
D+V +VI A I E
Sbjct: 259 DIVLMVINAEEGIRE 273
>gi|29376112|ref|NP_815266.1| GTP-binding protein EngA [Enterococcus faecalis V583]
gi|227518740|ref|ZP_03948789.1| GTP-binding protein EngA [Enterococcus faecalis TX0104]
gi|227553350|ref|ZP_03983399.1| GTP-binding protein EngA [Enterococcus faecalis HH22]
gi|257419285|ref|ZP_05596279.1| GTP-binding protein engA [Enterococcus faecalis T11]
gi|422714634|ref|ZP_16771360.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0309A]
gi|422715892|ref|ZP_16772608.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0309B]
gi|424676775|ref|ZP_18113646.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV103]
gi|424681407|ref|ZP_18118194.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV116]
gi|424683597|ref|ZP_18120347.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV129]
gi|424686499|ref|ZP_18123167.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV25]
gi|424690228|ref|ZP_18126763.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV31]
gi|424695322|ref|ZP_18131705.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV37]
gi|424696939|ref|ZP_18133280.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV41]
gi|424699675|ref|ZP_18135886.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV62]
gi|424703312|ref|ZP_18139446.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV63]
gi|424706003|ref|ZP_18142016.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV65]
gi|424717148|ref|ZP_18146446.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV68]
gi|424720727|ref|ZP_18149828.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV72]
gi|424724277|ref|ZP_18153226.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV73]
gi|424733864|ref|ZP_18162419.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV81]
gi|424749532|ref|ZP_18177635.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV93]
gi|37999534|sp|Q834T4.1|DER_ENTFA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|29343574|gb|AAO81336.1| GTPase, putative [Enterococcus faecalis V583]
gi|227073821|gb|EEI11784.1| GTP-binding protein EngA [Enterococcus faecalis TX0104]
gi|227177519|gb|EEI58491.1| GTP-binding protein EngA [Enterococcus faecalis HH22]
gi|257161113|gb|EEU91073.1| GTP-binding protein engA [Enterococcus faecalis T11]
gi|315575878|gb|EFU88069.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0309B]
gi|315580530|gb|EFU92721.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0309A]
gi|402351114|gb|EJU86006.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV116]
gi|402356395|gb|EJU91129.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV103]
gi|402364595|gb|EJU99030.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV129]
gi|402364915|gb|EJU99346.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV31]
gi|402367353|gb|EJV01694.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV25]
gi|402368499|gb|EJV02812.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV37]
gi|402375604|gb|EJV09584.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV62]
gi|402377268|gb|EJV11179.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV41]
gi|402385317|gb|EJV18857.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV63]
gi|402386496|gb|EJV20002.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV68]
gi|402388646|gb|EJV22074.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV65]
gi|402390874|gb|EJV24194.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV81]
gi|402393198|gb|EJV26428.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV72]
gi|402395418|gb|EJV28524.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV73]
gi|402407783|gb|EJV40288.1| ribosome biogenesis GTPase Der [Enterococcus faecalis ERV93]
Length = 436
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 183/314 (58%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGVRISIVEDTPGVTRDRIYTTGEWLGREFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
+G E P M I+ QA AI+E+ VIIF+
Sbjct: 62 ----------------DLGDE--------------PFMDQIKHQAEIAIDEADVIIFVAS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L ++ +K +ILAVNK ++P + EF++LG P P+S
Sbjct: 92 GREGITDADELVAKILYRS--NKPVILAVNKVDNPEMR-NDIYEFYALGLGDPFPVSGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD ED E+ I +++GRPNVGKSS++NA++GEDR IVS
Sbjct: 149 GLGIGDVLDEAVKHFPNTSEEED----EDTI-KFSLIGRPNVGKSSLINAILGEDRVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F EGQKF +IDTAG+RKR + S TE SV RA RAI RSD+
Sbjct: 204 DIEGTTRDAIDTYFESEEGQKFLMIDTAGMRKRGKVYES---TEKYSVMRAMRAIERSDI 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 100/198 (50%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R IV D G TRD + Y S G+ +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIVSDIEGTTRDAIDTYFESEEGQ-KFLMIDTAGM- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + E +T + +V R A AIE S +++ +++
Sbjct: 234 ---RKRGKVYE---------------STEKYSVMR--------AMRAIERSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ +A + + + II+ VNK ++ +K + EF L ++P+
Sbjct: 268 EEGIREQDKRVAGYAHE--AGRGIIIVVNKWDTVKKDTNTMRDFEAEIRDEFQYLDYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L +L+
Sbjct: 326 IFVSALTKQRLNKLPELI 343
>gi|293374967|ref|ZP_06621262.1| ribosome-associated GTPase EngA [Turicibacter sanguinis PC909]
gi|325843340|ref|ZP_08167923.1| ribosome biogenesis GTPase Der [Turicibacter sp. HGF1]
gi|292646377|gb|EFF64392.1| ribosome-associated GTPase EngA [Turicibacter sanguinis PC909]
gi|325489369|gb|EGC91742.1| ribosome biogenesis GTPase Der [Turicibacter sp. HGF1]
Length = 436
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/316 (43%), Positives = 191/316 (60%), Gaps = 46/316 (14%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS +FNR+VG +IV DEPG+TRDR+Y W +F ++DTGG+
Sbjct: 2 VLPVVAIVGRPNVGKSTIFNRIVGSRVSIVEDEPGITRDRIYSSGEWLTRKFNVIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFL 279
IG E P M I+ QA A++E+ VI+F+
Sbjct: 62 ------------------EIGDE--------------PFMRQIKYQAEIAMDEADVIVFV 89
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISA 338
+ + G+T AD+E+A+ L K K ++L VNK + Q+ EF+SLG P+ SA
Sbjct: 90 TNARDGITQADQEVANMLYKT--KKPVVLIVNKVDDINFK-EQIYEFYSLGLGDPIATSA 146
Query: 339 ISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
I G G G++LD + + + +G ++ E + +++GRPNVGKSS+ NAL+GE+R I
Sbjct: 147 IHGIGFGDMLDQIVLNMPEKKG----MDYEEDVIKFSLIGRPNVGKSSLTNALLGEERVI 202
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VS I+GTTRDAIDTEFT +GQK+ +IDTAG+RKR + TTE SV RA AI RS
Sbjct: 203 VSDIAGTTRDAIDTEFT-KDGQKYVVIDTAGMRKRGKVY---ETTEKYSVLRALSAIERS 258
Query: 459 DVVALVIEAMACITEQ 474
DV +VI+A + EQ
Sbjct: 259 DVCLIVIDASKGLIEQ 274
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N L+G R IV D G TRD + +++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSLTNALLGEERVIVSDIAGTTRDAIDTEFTKDGQKYVVIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A +AIE S V + ++D
Sbjct: 234 -RKRGKVYE---------------TTEKYSVLR--------ALSAIERSDVCLIVIDASK 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
GL D+ +A + + K +++ VNK ++ K
Sbjct: 270 GLIEQDKRVAGYAHE--AGKAVVIVVNKWDAIEK 301
>gi|398306785|ref|ZP_10510371.1| GTP-binding protein Der [Bacillus vallismortis DV1-F-3]
Length = 436
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 191/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I +QA A++E+ VIIF+V+G+
Sbjct: 62 ----------------DIGDE--PFLAQ----------IRQQAEIAMDEADVIIFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L + K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 94 EGVTAADEEVAKILYRT--KKPVVLAVNKLDNTEMR-ANIYDFYSLGFGEPYPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD K + T+ +EE + ++GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAAAEHFKNIPETK--YDEE--VVQFCLIGRPNVGKSSLVNAMLGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT FT + Q+F ++DTAG+RK+ + TTE SV RA +AI RS+VVA
Sbjct: 207 AGTTRDAVDTSFTYNQ-QEFVIVDTAGMRKKGKVY---ETTEKYSVLRALKAIDRSEVVA 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 33/174 (18%)
Query: 157 NVPE----HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
N+PE + + ++GRPNVGKS+L N ++G R IV + G TRD + + + E
Sbjct: 165 NIPETKYDEEVVQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTSFTYNQQE 224
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F++VDT G+ + + + E T + +V R A AI+
Sbjct: 225 FVIVDTAGM----RKKGKVYE---------------TTEKYSVLR--------ALKAIDR 257
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
S V+ ++DG+ G+ D+ IA + + K +++ VNK ++ K + EF
Sbjct: 258 SEVVAVVLDGEEGIIEQDKRIAGYAHE--AGKAVVIVVNKWDAVDKDESTMKEF 309
>gi|195978761|ref|YP_002124005.1| GTP-binding protein EngA [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|195975466|gb|ACG62992.1| GTP-binding protein EngA [Streptococcus equi subsp. zooepidemicus
MGCS10565]
Length = 446
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/307 (42%), Positives = 185/307 (60%), Gaps = 42/307 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 12 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRQFSLIDTGGI 71
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A++E+ VI+F+V
Sbjct: 72 DDVD------------------------------APFMEQIKHQAHIAMDEADVIVFVVS 101
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++
Sbjct: 102 GKEGVTDADEYVSKLLYRT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPFPVSSVH 158
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E++VE ++ I +++GRPNVGKSS++NA++GE+R I S
Sbjct: 159 GIGTGDVLDAIIDNLP----VEEIVENDDVI-RFSLIGRPNVGKSSLINAILGEERVIAS 213
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT GQ + +IDTAG+RK + + TE SV RA RAI RSD+
Sbjct: 214 PVAGTTRDAIDTSFTDESGQAYTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDI 270
Query: 461 VALVIEA 467
V +VI A
Sbjct: 271 VLMVINA 277
>gi|418318769|ref|ZP_12930162.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21232]
gi|365242111|gb|EHM82833.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21232]
Length = 436
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I Q+ AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQSEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V S G E+ + ++I+GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GLGDLLDAVVSHF----GEEEEDPYDEDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
>gi|220931895|ref|YP_002508803.1| small GTP-binding protein [Halothermothrix orenii H 168]
gi|254783157|sp|B8CWY9.1|DER_HALOH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|219993205|gb|ACL69808.1| small GTP-binding protein [Halothermothrix orenii H 168]
Length = 438
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 190/312 (60%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL G +IV EP VTRDR+Y W + F++VDTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRLAGYRISIVEGEPNVTRDRIYADVNWLDRSFIIVDTGGIDP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ Q + +M++ QA AI+E+ +I+F+VDG+
Sbjct: 64 YDRDQ-----------------------------IKNMVKYQAQMAIDEASLILFVVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
GLTA DEE+A +LRK+ +K +IL VNK + + EF++LGF L PISA G
Sbjct: 95 NGLTATDEEVAAFLRKS--NKKVILVVNKVDDFKNMEEDCWEFYTLGFDKLIPISAEHGK 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
TG+LLD + + L + +G ED ++ +AI+G+PNVGKSS++N +VG++R IVS I
Sbjct: 153 NTGDLLDEIVNMLPE-KGPED---SDDDAIDVAIIGKPNVGKSSLVNYIVGQERVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT G ++ LIDTAG+RK++ + + TE S R +AI RSD V
Sbjct: 209 PGTTRDAIDT-LVEKNGHRYNLIDTAGLRKKSRVKEA---TEYYSALRTIKAIDRSDGVI 264
Query: 463 LVIEAMACITEQ 474
++I+A+ +TEQ
Sbjct: 265 MMIDALEGVTEQ 276
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 38/195 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+G+PNVGKS+L N +VG R IV D PG TRD + H + L+DT G+ S
Sbjct: 180 VAIIGKPNVGKSSLVNYIVGQERVIVSDIPGTTRDAIDTLVEKNGHRYNLIDTAGLRKKS 239
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + AT + R AI+ S +I ++D G
Sbjct: 240 RVKE-------------------ATEYYSALR--------TIKAIDRSDGVIMMIDALEG 272
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE-----FWSLGF---SPLP-I 336
+T D++IA + + K I+LAVNK + K + +++L F +P+ I
Sbjct: 273 VTEQDKKIAGYAHE--AGKAIVLAVNKWDLVEKDTHTMENYKEEIYYNLKFLQYAPVTFI 330
Query: 337 SAISGTGTGELLDLV 351
SA++G ELL L+
Sbjct: 331 SALTGKRVQELLKLI 345
>gi|325571137|ref|ZP_08146709.1| ribosome-associated GTPase EngA [Enterococcus casseliflavus ATCC
12755]
gi|325156222|gb|EGC68408.1| ribosome-associated GTPase EngA [Enterococcus casseliflavus ATCC
12755]
Length = 436
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/314 (44%), Positives = 183/314 (58%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYATGEWLGREFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
DL+ P M I+ QA AI+E+ VI+F+
Sbjct: 62 ----------DLS--------------------DEPFMDQIKHQAEIAIDEADVIVFITS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+ G+T ADE +A L K+ +K +ILAVNK ++P + EF+ LG P PIS
Sbjct: 92 AREGVTDADELVARLLYKS--NKPVILAVNKVDNPEMR-NDIYEFYGLGLGDPYPISGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD T + EE++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGIGDVLDEAVKHF-----TNEAEEEDDSIIKFSLIGRPNVGKSSLINAILGEERVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT FT GQ+F +IDTAG+RK+ + S TE SV RA RAI RSDV
Sbjct: 204 DIEGTTRDAIDTHFTSESGQEFTMIDTAGMRKKGKVYES---TEKYSVMRAMRAIERSDV 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R IV D G TRD + F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIVSDIEGTTRDAI-DTHFTSESGQEFTMIDTAGM- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + E +T + +V R A AIE S V++ +++
Sbjct: 234 ---RKKGKVYE---------------STEKYSVMR--------AMRAIERSDVVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ IA + + + II+ VNK ++ +K + EF L ++P+
Sbjct: 268 EEGIREQDKRIAGYAHE--AGRGIIIVVNKWDTLKKETNTMRDFEEEIRDEFQYLDYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L L+
Sbjct: 326 IFVSAVTKQRLNKLPQLI 343
>gi|392989861|ref|YP_006488454.1| GTP-binding protein Der [Enterococcus hirae ATCC 9790]
gi|392337281|gb|AFM71563.1| GTP-binding protein Der [Enterococcus hirae ATCC 9790]
Length = 436
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 184/314 (58%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYAKGEWLGREFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
+G E P M I+ QA AIEE+ VII +V
Sbjct: 62 ----------------DLGDE--------------PFMDQIKHQAEIAIEEADVIICVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L ++ +K +ILAVNK ++P + EF+SLG P P+S
Sbjct: 92 GREGVTDADEVVAKILYRS--NKPVILAVNKVDNPEMR-NDIYEFYSLGLGDPYPVSGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD + D EEE+ +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGIGDVLDEAIKHF-----SNDGEEEEDDTIKFSLIGRPNVGKSSLINAILGEERVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F GQKF +IDTAG+RKR + + TE SV RA RAI RSD+
Sbjct: 204 DIEGTTRDAIDTHFVSDNGQKFLMIDTAGMRKRGKVYEN---TEKYSVMRAMRAIDRSDI 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 89/187 (47%), Gaps = 41/187 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH--EFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R IV D G TRD + F ++ +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIVSDIEGTTRDAI-DTHFVSDNGQKFLMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KRGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ +A + + + +I+ VNK + +K + EF L ++P+
Sbjct: 268 EEGIREQDKRVAGYAHE--AGRGVIIVVNKWDLVKKETNTMRDFEQEIREEFRYLDYAPI 325
Query: 335 P-ISAIS 340
+SA++
Sbjct: 326 VFVSAVT 332
>gi|420263972|ref|ZP_14766607.1| ribosome-associated GTPase EngA [Enterococcus sp. C1]
gi|394768871|gb|EJF48748.1| ribosome-associated GTPase EngA [Enterococcus sp. C1]
Length = 436
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/314 (44%), Positives = 183/314 (58%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYATGEWLGREFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
DL+ P M I+ QA AI+E+ VI+F+
Sbjct: 62 ----------DLS--------------------DEPFMDQIKHQAEIAIDEADVIVFITS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+ G+T ADE +A L K+ +K +ILAVNK ++P + EF+ LG P PIS
Sbjct: 92 AREGVTDADELVARLLYKS--NKPVILAVNKVDNPEMR-NDIYEFYGLGLGDPYPISGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD T + EE++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGIGDVLDEAVKHF-----TNEAEEEDDSIIKFSLIGRPNVGKSSLINAILGEERVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT FT GQ+F +IDTAG+RK+ + S TE SV RA RAI RSDV
Sbjct: 204 DIEGTTRDAIDTHFTSESGQEFTMIDTAGMRKKGKVYES---TEKYSVMRAMRAIERSDV 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R IV D G TRD + F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIVSDIEGTTRDAI-DTHFTSESGQEFTMIDTAGM- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + E +T + +V R A AIE S V++ +++
Sbjct: 234 ---RKKGKVYE---------------STEKYSVMR--------AMRAIERSDVVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ IA + + + II+ +NK ++ +K + EF L ++P+
Sbjct: 268 EEGIREQDKRIAGYAHE--AGRGIIIVINKWDTLKKETNTMRDFEEEIRDEFQYLDYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L L+
Sbjct: 326 IFVSAVTKQRLNKLPQLI 343
>gi|408423615|emb|CCJ11026.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408425605|emb|CCJ12992.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408427593|emb|CCJ14956.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408429581|emb|CCJ26746.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408431568|emb|CCJ18883.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408433562|emb|CCJ20847.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408435554|emb|CCJ22814.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408437538|emb|CCJ24781.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
Length = 436
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 186/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIGEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V S G E+ + ++I+GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GLGDLLDAVVSHF----GEEEEDPYDEDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
>gi|431794252|ref|YP_007221157.1| ribosome-associated GTPase EngA [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784478|gb|AGA69761.1| ribosome-associated GTPase EngA [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 441
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 189/314 (60%), Gaps = 45/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL GG AIV + PGVTRDR+Y + W +F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRLAGGLVAIVENRPGVTRDRLYRDAEWLGRKFTIIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+++ P + S + RQA AIEE+ VI+F++D Q
Sbjct: 64 VNENTP----------------------------ISSQMRRQAEIAIEEADVIVFVIDAQ 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
T D+ IA+ LR++ K +ILA NK E K ++ EF+ LG P+PISA+ G
Sbjct: 96 VSPTPDDDMIANTLRRS--GKPVILAANKVEHFEKA--ELYEFYRLGLGEPIPISAVHGM 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEE--NRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G+LLD V S D +EEE IA+VGRPNVGKSS++N L+GE+R IVS
Sbjct: 152 NIGDLLDEVISHFP------DELEEEIDPDTIRIAVVGRPNVGKSSLVNTLLGEERVIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAID+ F +G+ + +IDTAG+R++ I TE SV R+ RA+ RSDV
Sbjct: 206 NIPGTTRDAIDSAFKH-DGKSYVIIDTAGMRRKGRIE---ELTEQYSVARSLRAVDRSDV 261
Query: 461 VALVIEAMACITEQ 474
+ ++IEA+ +TEQ
Sbjct: 262 ILMLIEAVEGVTEQ 275
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 49/214 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A+VGRPNVGKS+L N L+G R IV + PG TRD + ++++DT G+
Sbjct: 178 RIAVVGRPNVGKSSLVNTLLGEERVIVSNIPGTTRDAIDSAFKHDGKSYVIIDTAGMRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ +E+L T + +VAR + A++ S VI+ L++
Sbjct: 238 GR-----IEEL--------------TEQYSVAR--------SLRAVDRSDVILMLIEAVE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGF---SP-LP 335
G+T D++IA + + K I+L VNK + K ++ F LGF +P L
Sbjct: 271 GVTEQDKKIAGYAHE--AGKGIVLVVNKWDLVEKDDKTMNRFEKTIREELGFMQYAPTLF 328
Query: 336 ISAISGTGTGELLDLVCSELKKVEGTEDLVEEEN 369
ISA +G +LLDLV D V E+N
Sbjct: 329 ISAKTGQRVTKLLDLV-----------DFVAEQN 351
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 372 PAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI--DTEFTGPEGQKFRLIDTAG 429
P +AIVGRPNVGKS++ N L G IV G TRD + D E+ G+KF +IDT G
Sbjct: 4 PVVAIVGRPNVGKSTLFNRLAGGLVAIVENRPGVTRDRLYRDAEWL---GRKFTIIDTGG 60
Query: 430 IRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQAD 476
I + + + +A AI +DV+ VI+A T D
Sbjct: 61 IE----FVNENTPISSQMRRQAEIAIEEADVIVFVIDAQVSPTPDDD 103
>gi|225867922|ref|YP_002743870.1| GTP-binding protein EngA [Streptococcus equi subsp. zooepidemicus]
gi|225701198|emb|CAW98121.1| GTP-binding protein EngA [Streptococcus equi subsp. zooepidemicus]
Length = 446
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/307 (42%), Positives = 185/307 (60%), Gaps = 42/307 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 12 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRQFSLIDTGGI 71
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A++E+ VI+F+V
Sbjct: 72 DDVD------------------------------APFMEQIKHQAHIAMDEADVIVFVVS 101
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++
Sbjct: 102 GKEGVTDADEYVSKLLYRT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPFPVSSVH 158
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E++VE ++ I +++GRPNVGKSS++NA++GE+R I S
Sbjct: 159 GIGTGDVLDAIIDNLP----VEEIVENDDVI-RFSLIGRPNVGKSSLINAILGEERVIAS 213
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT GQ + +IDTAG+RK + + TE SV RA RAI RSD+
Sbjct: 214 PVAGTTRDAIDTSFTDESGQAYTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDI 270
Query: 461 VALVIEA 467
V +VI A
Sbjct: 271 VLMVINA 277
>gi|363893307|ref|ZP_09320444.1| ribosome-associated GTPase EngA [Eubacteriaceae bacterium CM2]
gi|402838428|ref|ZP_10886935.1| ribosome-associated GTPase EngA [Eubacteriaceae bacterium OBRC8]
gi|361961405|gb|EHL14606.1| ribosome-associated GTPase EngA [Eubacteriaceae bacterium CM2]
gi|402272905|gb|EJU22116.1| ribosome-associated GTPase EngA [Eubacteriaceae bacterium OBRC8]
Length = 440
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/310 (44%), Positives = 186/310 (60%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRLVG +IV D PGVTRDR++ W + F L+DTGG+
Sbjct: 5 VAIVGRPNVGKSTLFNRLVGERISIVEDTPGVTRDRIFADVSWLNYSFTLIDTGGI---E 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
N++ P M+ +QA AI+ + VI+F+VDG+AG
Sbjct: 62 TDTDNLI--------------------------PEMMRKQAQIAIDMADVIMFVVDGKAG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
L D E+AD LRK+ K +I+ VNK ++ R +F+ LGF + IS+ G G
Sbjct: 96 LVPQDFEVADLLRKS--KKPVIVIVNKVDNSRLP-DDYYDFYQLGFDNMYAISSTQGLGL 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G++LD + + K E+L+E E+ +AI+G+PN GKSSILNAL+GE+RTIVSPI+G
Sbjct: 153 GDMLDEIVALFPK----EELLEVEDNSIKVAIIGKPNAGKSSILNALIGEERTIVSPIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAID E G + IDTAGIRK+ I + E SV RA+ AI ++DVV +V
Sbjct: 209 TTRDAID-EKCNINGIDYTFIDTAGIRKKNKIYDN---IEKYSVLRAYSAIEKADVVLVV 264
Query: 465 IEAMACITEQ 474
I+A +TEQ
Sbjct: 265 IDATTMVTEQ 274
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PN GKS++ N L+G R IV G TRD + + ++ +DT G+
Sbjct: 177 KVAIIGKPNAGKSSILNALIGEERTIVSPIAGTTRDAIDEKCNINGIDYTFIDTAGIRKK 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+K NI + +V R A +AIE++ V++ ++D
Sbjct: 237 NKIYDNI-------------------EKYSVLR--------AYSAIEKADVVLVVIDATT 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSPLP- 335
+T D +IA + K +I+ VNK + +K + ++ S + ++P+
Sbjct: 270 MVTEQDTKIAGLAHE--AGKCVIVVVNKWDLIQKETNTMRDYTSDVRNSLAYMQYAPVEF 327
Query: 336 ISAISGTGTGELLDLV 351
ISA +G +++L+
Sbjct: 328 ISAKTGKRLNNIVELI 343
>gi|407718427|ref|YP_006795832.1| GTP-binding protein Der [Leuconostoc carnosum JB16]
gi|407242183|gb|AFT81833.1| GTP-binding protein Der [Leuconostoc carnosum JB16]
Length = 437
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 185/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G AIV D+PGVTRDR+Y + W +EF ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRMAGERIAIVEDQPGVTRDRLYAPAEWLNYEFRMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+G E P S I Q AI+E+ VI+ + G+
Sbjct: 62 ----------------ELGDE--PFL----------SEIRAQVELAIDEADVIVMVASGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT+ADE +A L + K ++LA+NK ++P V +F++LG P P+S G
Sbjct: 94 EGLTSADEVVAKMLYRT--KKPVVLAINKVDNPEMR-QDVYDFYALGLGDPFPVSGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V E E +E++ + +I+GRPNVGKSSI+NA++GE+R IVS I
Sbjct: 151 GLGDLLDEVVKHFPD-EAAE---QEDDGVTRFSIIGRPNVGKSSIVNAMLGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F PEG +F ++DTAG+RKR + + TE SV RA +AI S V+
Sbjct: 207 EGTTRDAIDTRFVTPEGDEFIMVDTAGMRKRGKVYEN---TEKYSVMRALKAIDNSSVIL 263
Query: 463 LVIEAMACITEQ 474
+VI+A A I EQ
Sbjct: 264 MVIDAEAGIREQ 275
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 30/166 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +I+GRPNVGKS++ N ++G R IV D G TRD + R E EF++VDT G+
Sbjct: 177 RFSIIGRPNVGKSSIVNAMLGEERVIVSDIEGTTRDAIDTRFVTPEGDEFIMVDTAGMRK 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S VI+ ++D +
Sbjct: 237 RGKVYEN-------------------TEKYSVMR--------ALKAIDNSSVILMVIDAE 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL 329
AG+ D+ +A + + +I+ VNK ++ K + EF +
Sbjct: 270 AGIREQDKHVAGFAHD--AGRAMIIVVNKWDAIEKDDHTMKEFEEM 313
>gi|384135333|ref|YP_005518047.1| small GTP-binding protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339289418|gb|AEJ43528.1| small GTP-binding protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 444
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 190/313 (60%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGR NVGKS LFNRLVG +IV D PGVTRDR+YG+S W F ++DTGG+
Sbjct: 3 LPVVAIVGRANVGKSTLFNRLVGRRVSIVEDTPGVTRDRIYGKSEWNGVPFRVIDTGGIE 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + M ++I QA AI+E+ VI+F+VDG
Sbjct: 63 MDEEDE-----------------------------MGNLIRVQAQIAIDEADVILFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A LR+ K ++L VNK + ++ + EF+ LGF P+P SA G
Sbjct: 94 RQGVTQADEHVAQVLRR--ARKPVVLGVNKLDHVQQHALSY-EFYRLGFGEPIPFSAEHG 150
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG+LLD V + L K G + E+E+ I IA +GRPNVGKSS++N L+GE+R +VSP
Sbjct: 151 RGTGDLLDAVVAALPKASGED---EDEDAI-RIAFIGRPNVGKSSLVNRLLGEERVMVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDA+DT +GQ + L+DTAG+R++ + E SV RA RA+ R+DV
Sbjct: 207 VAGTTRDAVDTPLE-RDGQAYVLVDTAGMRRKGKVYER---IEKYSVLRALRALDRADVA 262
Query: 462 ALVIEAMACITEQ 474
+V++A I EQ
Sbjct: 263 FVVLDAETGIVEQ 275
>gi|363894034|ref|ZP_09321126.1| GTP-binding protein engA [Eubacteriaceae bacterium ACC19a]
gi|361963108|gb|EHL16196.1| GTP-binding protein engA [Eubacteriaceae bacterium ACC19a]
Length = 440
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 139/310 (44%), Positives = 186/310 (60%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRLVG +IV D PGVTRDR++ W + F L+DTGG+
Sbjct: 5 VAIVGRPNVGKSTLFNRLVGERISIVEDTPGVTRDRIFADVSWLNYSFTLIDTGGI---E 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
N++ P M+ +QA AI+ + VI+F+VDG+AG
Sbjct: 62 TDTDNLI--------------------------PEMMRKQAQIAIDMADVIMFVVDGKAG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
L D E+AD LRK+ K +I+ VNK ++ R +F+ LGF + IS+ G G
Sbjct: 96 LVPQDFEVADLLRKS--KKPVIVIVNKVDNSRLP-DDYYDFYQLGFENMYAISSTQGLGL 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G++LD + + K E+L+E E+ +AI+G+PN GKSSILNAL+GE+RTIVSPI+G
Sbjct: 153 GDMLDEIVALFPK----EELLEVEDNSIKVAIIGKPNAGKSSILNALIGEERTIVSPIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAID E G + IDTAGIRK+ I + E SV RA+ AI ++DVV +V
Sbjct: 209 TTRDAID-EKCNINGIDYTFIDTAGIRKKNKIYDN---IEKYSVLRAYSAIEKADVVLVV 264
Query: 465 IEAMACITEQ 474
I+A +TEQ
Sbjct: 265 IDATTMVTEQ 274
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 36/200 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PN GKS++ N L+G R IV G TRD + + ++ +DT G+
Sbjct: 177 KVAIIGKPNAGKSSILNALIGEERTIVSPIAGTTRDAIDEKCNINGIDYTFIDTAGIRKK 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+K NI + +V R A +AIE++ V++ ++D
Sbjct: 237 NKIYDNI-------------------EKYSVLR--------AYSAIEKADVVLVVIDATT 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSPL-PISA 338
+T D +IA + K +I+ VNK + +K + ++ SL + P+
Sbjct: 270 MVTEQDTKIAGLAHE--AGKCVIVVVNKWDLIQKETNTMRDYTADVRNSLAYMQYAPVEF 327
Query: 339 ISGTGTGELLDLVCSELKKV 358
IS TG+ L+ + + KV
Sbjct: 328 ISAK-TGKRLNNIVELINKV 346
>gi|258511668|ref|YP_003185102.1| ribosome-associated GTPase EngA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478394|gb|ACV58713.1| ribosome-associated GTPase EngA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 444
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 190/313 (60%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGR NVGKS LFNRLVG +IV D PGVTRDR+YG+S W F ++DTGG+
Sbjct: 3 LPVVAIVGRANVGKSTLFNRLVGRRVSIVEDTPGVTRDRIYGKSEWNGVPFRVIDTGGIE 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + M ++I QA AI+E+ VI+F+VDG
Sbjct: 63 MDEEDE-----------------------------MGNLIRVQAQIAIDEADVILFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A LR+ + K ++L VNK + + + EF+ LGF P+P SA G
Sbjct: 94 RQGVTQADEHVAQVLRRAH--KPVVLGVNKLDHVEQHALSY-EFYRLGFGEPIPFSAEHG 150
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG+LLD V + L K ED E+E+ I IA +GRPNVGKSS++N L+GE+R +VSP
Sbjct: 151 QGTGDLLDAVVAALPKAS-EED--EDEDAI-RIAFIGRPNVGKSSLVNRLLGEERVMVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDA+DT +GQ + L+DTAG+R++ + E SV RA RA+ R+DV
Sbjct: 207 VAGTTRDAVDTPLE-RDGQTYMLVDTAGMRRKGKVYER---IEKYSVLRALRALDRADVA 262
Query: 462 ALVIEAMACITEQ 474
+V++A I EQ
Sbjct: 263 FVVLDAQTGIVEQ 275
>gi|418010831|ref|ZP_12650602.1| GTP-binding protein [Lactobacillus casei Lc-10]
gi|410553410|gb|EKQ27413.1| GTP-binding protein [Lactobacillus casei Lc-10]
Length = 435
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 191/314 (60%), Gaps = 43/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AIVGRPNVGKS +FNR++G +IV D PGVTRDR+YG S W EF ++DTGG+
Sbjct: 2 VLPTLAIVGRPNVGKSTIFNRILGERVSIVEDTPGVTRDRIYGTSEWLGKEFAVIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+G E P + I+ QA AI+E+ VI+FL D
Sbjct: 62 ------------------DLGDE--PFL----------AQIKDQAEIAIDEADVILFLAD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
++G+T ADE +A L + K ++LAVNK ++P + + +F+SLGF P P+S
Sbjct: 92 IESGVTDADERVAQILYR--AKKPVVLAVNKVDNPERR-QDIYDFYSLGFGEPYPLSGTH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD V + +ED E++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GIGLGDVLDAVLAAFP----SEDKSVEDDSI-KFSLIGRPNVGKSSLVNAILGENRVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI GTTRDAID +F + + F +IDTAGIRKR + + TE +V RA RAI RSDV
Sbjct: 204 PIEGTTRDAIDAKFEAVD-ETFTMIDTAGIRKRGKVYEN---TEKYAVMRALRAIDRSDV 259
Query: 461 VALVIEAMACITEQ 474
V VI A I EQ
Sbjct: 260 VLFVINAEEGIREQ 273
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 29/165 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N ++G NR IV G TRD + + + F ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLVNAILGENRVIVSPIEGTTRDAIDAKFEAVDETFTMIDTAGIRKR 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + AV R A AI+ S V++F+++ +
Sbjct: 236 GKVYEN-------------------TEKYAVMR--------ALRAIDRSDVVLFVINAEE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL 329
G+ D+++A + + + II+ VNK ++ K + +F +L
Sbjct: 269 GIREQDKKVAGYAHE--AGRGIIIVVNKWDTVEKDNHTMKDFENL 311
>gi|383753847|ref|YP_005432750.1| putative GTP-binding protein EngA [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365899|dbj|BAL82727.1| putative GTP-binding protein EngA [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 443
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 143/312 (45%), Positives = 187/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG
Sbjct: 4 PIVAIVGRPNVGKSTLFNQIGKKRVSIVDDMPGVTRDRIYLDAEWLNHEFTMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + M S QA A+EE+ VI+FLVDG+
Sbjct: 61 ----------------------IEFDESNHILKSMRS----QAEIAMEEADVILFLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT +DEE+A LR K +IL VNK +SP+ M + EF++LG P+P+SA +
Sbjct: 95 AGLTTSDEEVAKILRNT--KKPVILGVNKIDSPQLE-MNIYEFYNLGLGDPIPLSATNVM 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD + + + E E+ E+E +IA++GRPNVGKSS++N L+GE+R IVS +
Sbjct: 152 NLGDLLDAIVAAFPE-EVPEEKDEDE---ISIAVIGRPNVGKSSLVNQLLGEERVIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F + KF LIDTAG+R+R I E SV R+ RAI R+DVV
Sbjct: 208 AGTTRDAIDTHFV-KDDMKFMLIDTAGMRRRGKI---DEPVERYSVMRSLRAIDRADVVL 263
Query: 463 LVIEAMACITEQ 474
+VI A ITEQ
Sbjct: 264 MVINAFEGITEQ 275
>gi|358052402|ref|ZP_09146285.1| GTP-binding protein EngA [Staphylococcus simiae CCM 7213]
gi|357258097|gb|EHJ08271.1| GTP-binding protein EngA [Staphylococcus simiae CCM 7213]
Length = 436
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 188/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVG+PNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PVVAIVGKPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AIEE+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIEEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-NDIYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V E ED +++ ++I+GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVVEHFG--EEQEDPYDDDT--IRLSIIGRPNVGKSSLVNAILGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAVDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAVDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEQ--GKAVVIVVNKWDTVEKDSKTMKKF 309
>gi|311068799|ref|YP_003973722.1| GTP-binding protein EngA [Bacillus atrophaeus 1942]
gi|419820559|ref|ZP_14344169.1| GTP-binding protein Der [Bacillus atrophaeus C89]
gi|310869316|gb|ADP32791.1| GTP-binding protein EngA [Bacillus atrophaeus 1942]
gi|388475375|gb|EIM12088.1| GTP-binding protein Der [Bacillus atrophaeus C89]
Length = 436
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 190/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I +QA A++E+ VIIF+V+G+
Sbjct: 62 ----------------DIGDE--PFMTQ----------IRQQAEIAMDEADVIIFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L + K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGVTAADEEVAKILYRT--KKPVVLAVNKLDNTEMR-ANVYDFYSLGFGEPYPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD K + T+ EE + ++GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAAAEHFKNIPETK--YNEE--VVQFCLIGRPNVGKSSLVNAMLGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT F+ + Q F ++DTAG+RK+ + TTE SV RA +AI RS+VVA
Sbjct: 207 AGTTRDAVDTMFSYNQ-QDFVIVDTAGMRKKGKVY---ETTEKYSVLRALKAIDRSEVVA 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 33/174 (18%)
Query: 157 NVPE----HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
N+PE + + ++GRPNVGKS+L N ++G R IV + G TRD + + + +
Sbjct: 165 NIPETKYNEEVVQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTMFSYNQQD 224
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F++VDT G+ + + + E T + +V R A AI+
Sbjct: 225 FVIVDTAGM----RKKGKVYE---------------TTEKYSVLR--------ALKAIDR 257
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
S V+ ++DG+ G+ D+ IA + + K +++ VNK ++ K + EF
Sbjct: 258 SEVVAVVLDGEEGIIEQDKRIAGYAHE--AGKAVVIVVNKWDAVDKDERTMKEF 309
>gi|218290942|ref|ZP_03494999.1| small GTP-binding protein [Alicyclobacillus acidocaldarius LAA1]
gi|218239107|gb|EED06310.1| small GTP-binding protein [Alicyclobacillus acidocaldarius LAA1]
Length = 442
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 191/313 (61%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGR NVGKS LFNRLVG +IV D PGVTRDR+YG+S W F ++DTGG+
Sbjct: 3 LPVVAIVGRANVGKSTLFNRLVGRRVSIVEDTPGVTRDRIYGKSEWNGVPFRVIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
++ IG ++I QA AI+E+ VI+F+VDG
Sbjct: 62 -----------EMDEEDEIG-----------------NLIRVQAQIAIDEADVILFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A LR+ + K ++L VNK + + + EF+ LGF P+P SA G
Sbjct: 94 RQGVTQADEHVAQVLRRAH--KPVVLGVNKLDHVEQHALS-YEFYRLGFGEPIPFSAEHG 150
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG+LLD V + L K G + E+E+ I IA +GRPNVGKSS++N L+GE+R +VSP
Sbjct: 151 RGTGDLLDAVVAALPKQSGED---EDEDAI-RIAFIGRPNVGKSSLVNRLLGEERVMVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDA+DT +GQ + L+DTAG+R++ + E SV RA RA+ R+DV
Sbjct: 207 VAGTTRDAVDTPLE-RDGQSYVLVDTAGMRRKGKVYER---IEKYSVLRALRALDRADVA 262
Query: 462 ALVIEAMACITEQ 474
+V++A I EQ
Sbjct: 263 FVVLDAQTGIVEQ 275
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 35/220 (15%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A +GRPNVGKS+L NRL+G R +V G TRD + ++LVDT G+
Sbjct: 178 RIAFIGRPNVGKSSLVNRLLGEERVMVSPVAGTTRDAVDTPLERDGQSYVLVDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E + + + +A A++ + V ++D Q
Sbjct: 235 -RRKGKVYERIEKYSVL-----------------------RALRALDRADVAFVVLDAQT 270
Query: 285 GLTAADEEIADW-LRKNYMDKFIILAVNKCESPRKGIMQVS-----EFWSLGFSP-LPIS 337
G+ D+ +A + L F++ + E K + EF L F+P + +S
Sbjct: 271 GIVEQDKRVAGYALDAGCAIAFVVNKWDAIEKDDKTAHRFEEKIRDEFPFLRFAPVIFVS 330
Query: 338 AISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIV 377
A++G G LLD V E+ + NR+ A A V
Sbjct: 331 ALTGQRVGRLLD-VAKEIAEYHAMRVPTSTLNRVLADAQV 369
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 11/108 (10%)
Query: 371 IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI--DTEFTGPEGQKFRLIDTA 428
+P +AIVGR NVGKS++ N LVG +IV G TRD I +E+ G FR+IDT
Sbjct: 3 LPVVAIVGRANVGKSTLFNRLVGRRVSIVEDTPGVTRDRIYGKSEWNGV---PFRVIDTG 59
Query: 429 GIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQAD 476
GI + + V +A AI +DV+ V++ +T QAD
Sbjct: 60 GIE----MDEEDEIGNLIRV-QAQIAIDEADVILFVVDGRQGVT-QAD 101
>gi|449908997|ref|ZP_21794091.1| GTP-binding protein EngA [Streptococcus mutans OMZ175]
gi|449261902|gb|EMC59362.1| GTP-binding protein EngA [Streptococcus mutans OMZ175]
Length = 436
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 135/314 (42%), Positives = 185/314 (58%), Gaps = 46/314 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ +T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KESITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAIVDNLPA-----EAQEESSDIIKFSLIGRPNVGKSSLINAILGEDRVIA 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SP++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD
Sbjct: 203 SPVAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSD 259
Query: 460 VVALVIEAMACITE 473
+ +V+ A I E
Sbjct: 260 IALMVLNAEEGIRE 273
>gi|422728918|ref|ZP_16785324.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0012]
gi|315150548|gb|EFT94564.1| ribosome-associated GTPase EngA [Enterococcus faecalis TX0012]
Length = 436
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 139/314 (44%), Positives = 181/314 (57%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYTTGEWLGREFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
+G E P M I+ QA AI+E+ VIIF+
Sbjct: 62 ----------------DLGDE--------------PFMDQIKHQAEIAIDEADVIIFVAS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L ++ +K +ILAVNK ++P + EF++LG P P+S
Sbjct: 92 GREGITDADELVAKILYRS--NKPVILAVNKVDNPEMR-NDIYEFYALGLGDPFPVSGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD ED+ +++GRPNVGKSS++NA++GEDR IVS
Sbjct: 149 GLGIGDVLDEAVKHFPNTSEEEDV-----DTIKFSLIGRPNVGKSSLINAILGEDRVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F EGQKF +IDTAG+RKR + S TE SV RA RAI RSD+
Sbjct: 204 DIEGTTRDAIDTYFESEEGQKFLMIDTAGMRKRGKVYES---TEKYSVMRAMRAIERSDI 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 100/198 (50%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R IV D G TRD + Y S G+ +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIVSDIEGTTRDAIDTYFESEEGQ-KFLMIDTAGM- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + E +T + +V R A AIE S +++ +++
Sbjct: 234 ---RKRGKVYE---------------STEKYSVMR--------AMRAIERSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ +A + + + II+ VNK ++ +K + EF L ++P+
Sbjct: 268 EEGIREQDKRVAGYAHE--AGRGIIIVVNKWDTVKKDTNTMRDFEAEIRDEFQYLDYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L +L+
Sbjct: 326 IFVSALTKQRLNKLPELI 343
>gi|339498163|ref|ZP_08659139.1| GTP-binding protein Der [Leuconostoc pseudomesenteroides KCTC 3652]
Length = 436
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 182/312 (58%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G AIV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRMAGERIAIVEDMPGVTRDRLYASAEWLNYDFRMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I Q A++E+ VI+ +V G+
Sbjct: 62 ----------------------------EIGDAPFLAEIRGQVELALDEADVIVMVVSGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT ADE +A L K DK ++LAVNK ++P + +F++LG P P+S G
Sbjct: 94 EGLTEADEVVAKMLYKT--DKPVVLAVNKVDNPEMR-NDIYDFYALGLGDPFPVSGSHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V ++ E+E+ +I+GRPNVGKSSI+NA++GE R IVS I
Sbjct: 151 GLGDLLDEVVKHF-----PDEAAEQEDEAIRFSIIGRPNVGKSSIVNAMLGEKRVIVSDI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F P+G +F ++DTAG+RKR I + TE SV RA +AI S+V+
Sbjct: 206 EGTTRDAIDTRFVTPDGDEFVMVDTAGMRKRGKIYEN---TEKYSVMRAMKAIDDSNVIL 262
Query: 463 LVIEAMACITEQ 474
+V++A A I EQ
Sbjct: 263 MVLDAEAGIREQ 274
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 37/202 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +I+GRPNVGKS++ N ++G R IV D G TRD + R + EF++VDT G+
Sbjct: 176 RFSIIGRPNVGKSSIVNAMLGEKRVIVSDIEGTTRDAIDTRFVTPDGDEFVMVDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI++S VI+ ++D +
Sbjct: 236 RGKIYEN-------------------TEKYSVMR--------AMKAIDDSNVILMVLDAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL---GFSPL---PIS 337
AG+ D+ +A + + +I+ VNK ++ K +S+F +L F L PI
Sbjct: 269 AGIREQDKHVAGFAHD--AGRAMIIVVNKWDAIEKDDHTMSDFENLIRDEFKFLDYAPIV 326
Query: 338 AISGTGTGELLDLVCSELKKVE 359
+S TG+ LD + +K V+
Sbjct: 327 FVSAK-TGQRLDRLPQLVKDVD 347
>gi|450107362|ref|ZP_21860991.1| GTP-binding protein EngA [Streptococcus mutans SF14]
gi|449222057|gb|EMC21798.1| GTP-binding protein EngA [Streptococcus mutans SF14]
Length = 436
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 185/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+ +V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVCVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILAVNK ++P + +F++LG P P+S+ G
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMR-SAIYDFYALGLGEPYPVSSAHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVDNLPA-----EAQEESSDIIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD+V
Sbjct: 205 VAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDIV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|78045106|ref|YP_360738.1| GTP-binding protein EngA [Carboxydothermus hydrogenoformans Z-2901]
gi|123575819|sp|Q3AAU6.1|DER_CARHZ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|77997221|gb|ABB16120.1| GTP-binding protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 440
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 186/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR++G AIV D PGVTRDR+Y + W F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIIGERIAIVEDTPGVTRDRLYSEAEWQGKVFDLIDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
EDL ITT + RE Q AI E+ +I+F+ D +
Sbjct: 62 ------EFSEDL-ITTKV---------RE------------QIEKAINEADLILFVCDSR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ DE +A LRK+ DK +IL NK + + + LG P P+SA +GT
Sbjct: 94 EGITSTDEAVAKNLRKS--DKPVILVANKVDDYLNPPANFYDLYRLGLGEPFPVSAANGT 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLDLV S+L E ED EN + IA+VGRPNVGKSS++NAL+GE+R +VS I
Sbjct: 152 NVGDLLDLVISKLNFPEDYED----ENPVVKIAVVGRPNVGKSSLVNALLGEERVVVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT +G+ + LIDTAG+R+++ I E SVNR+ +AIRR+DV
Sbjct: 208 PGTTRDAIDTPMWY-QGKPYLLIDTAGMRRKSRIEED---LERYSVNRSIKAIRRADVAL 263
Query: 463 LVIEAMACITEQ 474
LVI A +TEQ
Sbjct: 264 LVISAEEGVTEQ 275
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 38/201 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E+ + ++A+VGRPNVGKS+L N L+G R +V D PG TRD + ++ ++L+DT
Sbjct: 173 ENPVVKIAVVGRPNVGKSSLVNALLGEERVVVSDIPGTTRDAIDTPMWYQGKPYLLIDTA 232
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + I EDL + ++ AI + V + +
Sbjct: 233 GM----RRKSRIEEDLERYSV-----------------------NRSIKAIRRADVALLV 265
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE--FWSLGF--- 331
+ + G+T D++IA + + + +I+ VNK E K + E ++ LGF
Sbjct: 266 ISAEEGVTEQDKKIAGLIHE--YGRGVIIVVNKWDLIEKDAKTADRYKEHIYFELGFLKY 323
Query: 332 SP-LPISAISGTGTGELLDLV 351
+P + +SA +G +L++LV
Sbjct: 324 APVIFVSAKTGQRLNKLMELV 344
>gi|399515908|ref|ZP_10757541.1| GTP-binding protein EngA [Leuconostoc pseudomesenteroides 4882]
gi|398649342|emb|CCJ65568.1| GTP-binding protein EngA [Leuconostoc pseudomesenteroides 4882]
Length = 436
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 182/312 (58%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G AIV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRMAGERIAIVEDMPGVTRDRLYASAEWLNYDFRMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I Q A++E+ VI+ +V G+
Sbjct: 62 ----------------------------EIGDAPFLAEIRGQVELALDEADVIVMVVSGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT ADE +A L K DK ++LAVNK ++P + +F++LG P P+S G
Sbjct: 94 EGLTEADEVVAKMLYKT--DKPVVLAVNKVDNPEMR-NDIYDFYALGLGDPFPVSGSHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V ++ E+E+ +I+GRPNVGKSSI+NA++GE R IVS I
Sbjct: 151 GLGDLLDEVVKHF-----PDEAAEQEDEAIRFSIIGRPNVGKSSIVNAMLGEKRVIVSDI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F P+G +F ++DTAG+RKR I + TE SV RA +AI S+V+
Sbjct: 206 EGTTRDAIDTRFVTPDGDEFVMVDTAGMRKRGKIYEN---TEKYSVMRAMKAIDDSNVIL 262
Query: 463 LVIEAMACITEQ 474
+V++A A I EQ
Sbjct: 263 MVLDAEAGIREQ 274
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 37/202 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +I+GRPNVGKS++ N ++G R IV D G TRD + R + EF++VDT G+
Sbjct: 176 RFSIIGRPNVGKSSIVNAMLGEKRVIVSDIEGTTRDAIDTRFVTPDGDEFVMVDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI++S VI+ ++D +
Sbjct: 236 RGKIYEN-------------------TEKYSVMR--------AMKAIDDSNVILMVLDAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL---GFSPL---PIS 337
AG+ D+ +A + + +I+ VNK ++ K +S+F +L F L PI
Sbjct: 269 AGIREQDKHVAGFAHD--AGRAMIIVVNKWDAIEKDDHTMSDFENLIRDEFKFLDYAPIV 326
Query: 338 AISGTGTGELLDLVCSELKKVE 359
+S TG+ LD + +K V+
Sbjct: 327 FVSAK-TGQRLDRLPQLVKDVD 347
>gi|300812163|ref|ZP_07092607.1| ribosome-associated GTPase EngA [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300496848|gb|EFK31926.1| ribosome-associated GTPase EngA [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 435
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 183/313 (58%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR++ AIV D PGVTRDR Y R+ W H+F ++DTGG+
Sbjct: 3 LPIVAIVGRPNVGKSTLFNRIINERVAIVEDRPGVTRDRNYARASWMGHQFSIIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
ED +TI E I QA AIEE+ VI+ L D
Sbjct: 62 --------TWED----STIDEE-----------------IRAQAEIAIEEADVIVMLADA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+T+ DE IA L + DK ++LAVNK ++P + + +F+SLG P+P+S G
Sbjct: 93 SQGVTSLDERIAHLLYR--ADKPVLLAVNKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD V D + E + + +++GRPNVGKSSI+N L+GE+R IV+
Sbjct: 150 TGIGDLLDEVVKNFPA-----DAEKTEEGVISFSVIGRPNVGKSSIVNRLLGEERVIVAN 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
GTTRDAIDT F +G KFR++DTAGIR+R + TE SV RA A+ RSDV
Sbjct: 205 EEGTTRDAIDTPFV-KDGTKFRVVDTAGIRRRGKVYEK---TEKYSVMRAMSAMERSDVA 260
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 261 ILVLDASTGIREQ 273
>gi|450161423|ref|ZP_21880495.1| GTP-binding protein EngA [Streptococcus mutans 66-2A]
gi|449238689|gb|EMC37441.1| GTP-binding protein EngA [Streptococcus mutans 66-2A]
Length = 436
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 185/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+ +V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVCVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILAVNK ++P + +F++LG P P+S+ G
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMR-SAIYDFYALGLGDPYPVSSAHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L + EE + I +++GRPNVGKSS++NA++GEDR I SP
Sbjct: 150 IGTGDVLDAIVDNLPT-----EAQEESSDIIKFSLIGRPNVGKSSLINAILGEDRVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT EGQ+F +IDTAG+RK + + TE SV RA RAI RSD+V
Sbjct: 205 VAGTTRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDIV 261
Query: 462 ALVIEAMACITE 473
+V+ A I E
Sbjct: 262 LMVLNAEEGIRE 273
>gi|313123537|ref|YP_004033796.1| GTP-binding protein enga [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|422845530|ref|ZP_16892240.1| ribosome-associated GTPase EngA [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
gi|312280100|gb|ADQ60819.1| GTP-binding protein engA [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|325684298|gb|EGD26471.1| ribosome-associated GTPase EngA [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 435
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 183/313 (58%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR++ AIV D PGVTRDR Y R+ W H+F ++DTGG+
Sbjct: 3 LPIVAIVGRPNVGKSTLFNRIINERVAIVEDRPGVTRDRNYARASWMGHQFSIIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
ED +TI E I QA AIEE+ VI+ L D
Sbjct: 62 --------TWED----STIDEE-----------------IRAQAEIAIEEADVIVMLADA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+T+ DE IA L + DK ++LAVNK ++P + + +F+SLG P+P+S G
Sbjct: 93 SQGVTSLDERIAHLLYR--ADKPVLLAVNKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD V D + E + + +++GRPNVGKSSI+N L+GE+R IV+
Sbjct: 150 TGIGDLLDEVVKNFPA-----DAEKTEEGVISFSVIGRPNVGKSSIVNRLLGEERVIVAN 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
GTTRDAIDT F +G KFR++DTAGIR+R + TE SV RA A+ RSDV
Sbjct: 205 EEGTTRDAIDTPFV-KDGTKFRVVDTAGIRRRGKVYEK---TEKYSVMRAMSAMERSDVA 260
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 261 ILVLDASTGIREQ 273
>gi|256851011|ref|ZP_05556400.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 27-2-CHN]
gi|260661223|ref|ZP_05862137.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 115-3-CHN]
gi|256616073|gb|EEU21261.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 27-2-CHN]
gi|260548160|gb|EEX24136.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 115-3-CHN]
Length = 436
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 183/313 (58%), Gaps = 42/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVG+PNVGKS LFNR++ AIV D PGVTRDR Y ++ W HEF ++DTGG
Sbjct: 3 LPTVAIVGQPNVGKSTLFNRIINERLAIVEDRPGVTRDRNYAKASWLGHEFNIIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I EG R+ I QA A+EE+ VI+ +
Sbjct: 61 ------------------ITWEG----------GRIEDEIRAQADIAMEEADVIVMITSV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
LT DE IA L ++ K +ILAVNK ++P + + +F+SLG P+PIS+ G
Sbjct: 93 ALHLTDLDERIARILYRS--SKPVILAVNKADNPEQR-ADIYDFYSLGLGDPIPISSTHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD V T+D E+ I A +++GRPNVGKSSI+NA++G+ R IV+
Sbjct: 150 TGIGDLLDAVVENFPPEADTKD----EDEI-AFSVIGRPNVGKSSIINAMLGQKRVIVAN 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
GTTRDA+DT F +G KFR+IDTAGIR+R + TE SV RA AI+RSDVV
Sbjct: 205 EEGTTRDAVDTPFVAEDGTKFRMIDTAGIRRRGKVYEK---TEKYSVLRAQAAIQRSDVV 261
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 262 CLVLDASTGIREQ 274
>gi|422869377|ref|ZP_16915897.1| ribosome biogenesis GTPase Der [Enterococcus faecalis TX1467]
gi|329571714|gb|EGG53395.1| ribosome biogenesis GTPase Der [Enterococcus faecalis TX1467]
Length = 436
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 182/314 (57%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W EF ++DTGG
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYTTGEWLGREFSIIDTGGF-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
+G E P M I+ QA AI+E+ VIIF+
Sbjct: 62 ----------------DLGDE--------------PFMDQIKHQAEIAIDEADVIIFVAS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L ++ +K +ILAVNK ++P + EF++LG P P+S
Sbjct: 92 GREGITDADELVAKILYRS--NKPVILAVNKVDNPEMR-NDIYEFYALGLGDPFPVSGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD ED E+ I +++GRPNVGKSS++NA++GEDR IVS
Sbjct: 149 GLGIGDVLDEAVKHFPNTSEEED----EDTI-KFSLIGRPNVGKSSLINAILGEDRVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F EGQKF +IDTAG+RKR + S TE SV RA RAI RSD+
Sbjct: 204 DIEGTTRDAIDTYFESEEGQKFLMIDTAGMRKRGKVYES---TEKYSVMRAMRAIERSDI 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 100/198 (50%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R IV D G TRD + Y S G+ +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIVSDIEGTTRDAIDTYFESEEGQ-KFLMIDTAGM- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + E +T + +V R A AIE S +++ +++
Sbjct: 234 ---RKRGKVYE---------------STEKYSVMR--------AMRAIERSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ +A + + + II+ VNK ++ +K + EF L ++P+
Sbjct: 268 EEGIREQDKRVAGYAHE--AGRGIIIVVNKWDTVKKDTNTMRDFEAEIRDEFQYLDYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L +L+
Sbjct: 326 IFVSALTKQRLNKLPELI 343
>gi|308174076|ref|YP_003920781.1| GTPase [Bacillus amyloliquefaciens DSM 7]
gi|384158710|ref|YP_005540783.1| GTP-binding protein Der [Bacillus amyloliquefaciens TA208]
gi|384164851|ref|YP_005546230.1| GTPase essential for ribosome 50S subunit assembly [Bacillus
amyloliquefaciens LL3]
gi|384167771|ref|YP_005549149.1| GTP-binding protein EngA [Bacillus amyloliquefaciens XH7]
gi|307606940|emb|CBI43311.1| GTPase essential for ribosome 50S subunit assembly [Bacillus
amyloliquefaciens DSM 7]
gi|328552798|gb|AEB23290.1| GTP-binding protein Der [Bacillus amyloliquefaciens TA208]
gi|328912406|gb|AEB64002.1| GTPase essential for ribosome 50S subunit assembly [Bacillus
amyloliquefaciens LL3]
gi|341827050|gb|AEK88301.1| GTP-binding protein EngA [Bacillus amyloliquefaciens XH7]
Length = 436
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I +QA A++E+ VIIF+V+G+
Sbjct: 62 ----------------DIGDE--PFLTQ----------IRQQAEIAMDEADVIIFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ADEE+A L + K ++LAVNK ++ + +F++LGF P PIS G
Sbjct: 94 EGVTSADEEVAKILYRT--KKPVVLAVNKLDNTEMR-ANIYDFYALGFGEPYPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD K + T+ + + ++GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDACAEHFKNIPETK----YNDDVVQFCLIGRPNVGKSSLVNAMLGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT FT + Q+F ++DTAG+RK+ + TTE SV RA +AI RSDVV
Sbjct: 207 AGTTRDAVDTAFTYNQ-QEFVIVDTAGMRKKGKVY---ETTEKYSVLRALKAIDRSDVVG 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGILEQ 274
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 33/174 (18%)
Query: 157 NVPEHL----LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
N+PE + + ++GRPNVGKS+L N ++G R IV + G TRD + + + E
Sbjct: 165 NIPETKYNDDVVQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTAFTYNQQE 224
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F++VDT G+ + + + E T + +V R A AI+
Sbjct: 225 FVIVDTAGM----RKKGKVYE---------------TTEKYSVLR--------ALKAIDR 257
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
S V+ +++ + G+ D+ IA + + K +++ VNK ++ K + EF
Sbjct: 258 SDVVGVVLNAEEGILEQDKRIAGYAHE--AGKAVVIIVNKWDAVDKDESTMKEF 309
>gi|418029507|ref|ZP_12668045.1| hypothetical protein LDBUL1632_00839 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354689813|gb|EHE89786.1| hypothetical protein LDBUL1632_00839 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 435
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 183/313 (58%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR++ AIV D PGVTRDR Y R+ W H+F ++DTGG+
Sbjct: 3 LPIVAIVGRPNVGKSTLFNRIINERVAIVEDRPGVTRDRNYARASWMGHQFSIIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
ED +TI E I QA AIEE+ VI+ L D
Sbjct: 62 --------TWED----STIDEE-----------------IRAQAEIAIEEADVIVMLADA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+T+ DE IA L + DK ++LAVNK ++P + + +F+SLG P+P+S G
Sbjct: 93 SQGVTSLDERIAHLLYR--ADKPVLLAVNKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD V D + E + + +++GRPNVGKSSI+N L+GE+R IV+
Sbjct: 150 TGIGDLLDEVVKNFPA-----DSEKTEEGVISFSVIGRPNVGKSSIVNRLLGEERVIVAN 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
GTTRDAIDT F +G KFR++DTAGIR+R + TE SV RA A+ RSDV
Sbjct: 205 EEGTTRDAIDTPFV-KDGTKFRVVDTAGIRRRGKVYEK---TEKYSVMRAMSAMERSDVA 260
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 261 ILVLDASTGIREQ 273
>gi|326391582|ref|ZP_08213112.1| ribosome-associated GTPase EngA [Thermoanaerobacter ethanolicus JW
200]
gi|325992364|gb|EGD50826.1| ribosome-associated GTPase EngA [Thermoanaerobacter ethanolicus JW
200]
Length = 439
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 197/312 (63%), Gaps = 45/312 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS LFN+++G +IV D+PGVTRDR+YG + W + +F+LVDTGG+
Sbjct: 6 VSIVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRIYGNAEWLDKKFILVDTGGL---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
PN ED+ + S + Q AAI+ S VI+FLVD + G
Sbjct: 62 --DPN-AEDI----------------------LFSKVRLQVEAAIDASDVILFLVDAKEG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
L DEEIA+ LR+ K +IL NK +S ++ +F+SLG +P+PISA +G G
Sbjct: 97 LMPEDEEIANILRR--AKKEVILVCNKVDSFKEMPPTYYDFFSLGLGNPIPISASNGLGI 154
Query: 345 GELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GELLD V +L +++E TE+ ++ IA++G+PNVGKSS++N ++GE+R IVS I
Sbjct: 155 GELLDEVVKKLPQEELEYTEETIK-------IAVIGKPNVGKSSLVNKILGEERVIVSNI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F+ +G+ + LIDTAGIR+++ I+ S E SV RA AI RSD+
Sbjct: 208 PGTTRDAIDTPFS-KDGKNYVLIDTAGIRRKSRISES---IERYSVLRALAAIERSDICL 263
Query: 463 LVIEAMACITEQ 474
L+I+A TEQ
Sbjct: 264 LMIDATEGPTEQ 275
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 46/200 (23%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L N+++G R IV + PG TRD + ++L+DT G+
Sbjct: 178 KIAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER----QATAAIEESCVIIFLV 280
S R+ IER +A AAIE S + + ++
Sbjct: 238 S-------------------------------RISESIERYSVLRALAAIERSDICLLMI 266
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL--------GFS 332
D G T D +IA + +N K II+ VNK ++ +K V+E+ + F+
Sbjct: 267 DATEGPTEQDTKIAGYAFEN--GKGIIIVVNKWDAIKKDNNTVNEYTKMVREKLSFISFA 324
Query: 333 P-LPISAISGTGTGELLDLV 351
P L ISA +G +L+ V
Sbjct: 325 PILFISAKTGQRVHRVLETV 344
>gi|345017911|ref|YP_004820264.1| GTP-binding protein engA [Thermoanaerobacter wiegelii Rt8.B1]
gi|344033254|gb|AEM78980.1| GTP-binding protein engA [Thermoanaerobacter wiegelii Rt8.B1]
Length = 439
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 196/312 (62%), Gaps = 45/312 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS LFN+++G +IV D+PGVTRDR+YG + W + +F+LVDTGG+
Sbjct: 6 VSIVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRIYGNAEWLDKKFILVDTGGL---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
PN ED+ S + Q AAI+ S VI+FLVD + G
Sbjct: 62 --DPN-AEDILF----------------------SKVRLQVEAAIDASDVILFLVDAKEG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
L DEEIA+ LR+ K +IL NK +S ++ +F+SLG +P+PISA +G G
Sbjct: 97 LMPEDEEIANILRR--AKKEVILVCNKVDSFKEMPPTYYDFFSLGLGNPIPISASNGLGI 154
Query: 345 GELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GELLD V +L +++E TE+ ++ IA++G+PNVGKSS++N ++GE+R IVS I
Sbjct: 155 GELLDEVVKKLPQEELEYTEETIK-------IAVIGKPNVGKSSLVNKILGEERVIVSNI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F+ +G+ + LIDTAGIR+++ I+ S E SV RA AI RSD+
Sbjct: 208 PGTTRDAIDTPFS-KDGKNYVLIDTAGIRRKSRISES---IERYSVLRALAAIERSDICL 263
Query: 463 LVIEAMACITEQ 474
L+I+A TEQ
Sbjct: 264 LMIDATEGPTEQ 275
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 46/200 (23%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L N+++G R IV + PG TRD + ++L+DT G+
Sbjct: 178 KIAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER----QATAAIEESCVIIFLV 280
S R+ IER +A AAIE S + + ++
Sbjct: 238 S-------------------------------RISESIERYSVLRALAAIERSDICLLMI 266
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL--------GFS 332
D G T D +IA + +N K II+ VNK ++ +K V+E+ + F+
Sbjct: 267 DATEGPTEQDTKIAGYAFEN--GKGIIIVVNKWDAIKKDNNTVNEYTKMVREKLSFISFA 324
Query: 333 P-LPISAISGTGTGELLDLV 351
P L ISA +G +L+ V
Sbjct: 325 PILFISAKTGQRVHRVLETV 344
>gi|429505671|ref|YP_007186855.1| GTP-binding protein Der [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429487261|gb|AFZ91185.1| GTP-binding protein Der [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 436
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 191/315 (60%), Gaps = 48/315 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I +QA A++E+ VIIF+V+G+
Sbjct: 62 ----------------DIGDE--PFLTQ----------IRQQAEIAMDEADVIIFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ADEE+A L + K ++LAVNK ++ + +F++LGF P PIS G
Sbjct: 94 EGVTSADEEVAKILYRT--KKPVVLAVNKLDNTEMR-ANIYDFYALGFGEPYPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGT---EDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G G+LLD K + T +D+V+ ++GRPNVGKSS++NA++GE+R IV
Sbjct: 151 GLGDLLDACAEHFKNIPETKYSDDVVQ-------FCLIGRPNVGKSSLVNAMLGEERVIV 203
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S ++GTTRDA+DT FT + Q+F ++DTAG+RK+ + TTE SV RA +AI RSD
Sbjct: 204 SNVAGTTRDAVDTAFTYNQ-QEFVIVDTAGMRKKGKVY---ETTEKYSVLRALKAIDRSD 259
Query: 460 VVALVIEAMACITEQ 474
VV +V+ A I EQ
Sbjct: 260 VVGVVLNAEEGILEQ 274
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 33/174 (18%)
Query: 157 NVPEHL----LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
N+PE + + ++GRPNVGKS+L N ++G R IV + G TRD + + + E
Sbjct: 165 NIPETKYSDDVVQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTAFTYNQQE 224
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F++VDT G+ + + + E T + +V R A AI+
Sbjct: 225 FVIVDTAGM----RKKGKVYE---------------TTEKYSVLR--------ALKAIDR 257
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
S V+ +++ + G+ D+ IA + + K +++ VNK ++ K + EF
Sbjct: 258 SDVVGVVLNAEEGILEQDKRIAGYAHE--AGKAVVIIVNKWDAVDKDERTMKEF 309
>gi|334880466|emb|CCB81207.1| GTP-binding protein engA [Lactobacillus pentosus MP-10]
gi|339638925|emb|CCC18126.1| GTPase Der (GTP-binding protein EngA) [Lactobacillus pentosus IG1]
Length = 436
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 183/312 (58%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y S W +F L+DTGG
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYANSEWLGQDFSLIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I ++ P + I +QA AI+E+ VII+LV +
Sbjct: 61 -----------------IDIDDAPFIKQ----------ITQQAEIAIDEADVIIYLVSIK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE +A L ++ +K ++LAVNK ++P +V +F+SLGF P PIS G
Sbjct: 94 EGVTDADEHVAQILYRS--NKPVVLAVNKVDNPELR-SEVYDFYSLGFGDPYPISGAHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + G E+E +++GRPNVGKSSI+NAL+GE+R IVS +
Sbjct: 151 GLGDLLDAVIKNFPEKSG-----EDEPGTIRFSLIGRPNVGKSSIVNALLGEERVIVSDV 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT FT +G +F ++DTAGIRK+ + + TE SV RA +AI SDV
Sbjct: 206 AGTTRDAIDTAFTDEDGDRFVMVDTAGIRKKGKVYEN---TERYSVMRALKAIDNSDVAL 262
Query: 463 LVIEAMACITEQ 474
VI I EQ
Sbjct: 263 FVINGEEGIREQ 274
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 39/202 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
R +++GRPNVGKS++ N L+G R IV D G TRD + +F E F++VDT G+
Sbjct: 176 RFSLIGRPNVGKSSIVNALLGEERVIVSDVAGTTRDAI-DTAFTDEDGDRFVMVDTAGIR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T +V R A AI+ S V +F+++G
Sbjct: 235 KKGKVYEN-------------------TERYSVMR--------ALKAIDNSDVALFVING 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------LGFSPLPI 336
+ G+ D+ +A + + K I++ VNK ++ +K + EF + + S PI
Sbjct: 268 EEGIREQDKRVAGYAHE--AGKAIVIVVNKWDTVKKDNHTMQEFEAYIRDQFVYLSYAPI 325
Query: 337 SAISGTGTGELLDLVCSELKKV 358
+S T + L + + +KKV
Sbjct: 326 IFVSAK-TNQRLAQLPALIKKV 346
>gi|163754018|ref|ZP_02161141.1| hypothetical protein KAOT1_20387 [Kordia algicida OT-1]
gi|161326232|gb|EDP97558.1| hypothetical protein KAOT1_20387 [Kordia algicida OT-1]
Length = 434
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 137/311 (44%), Positives = 189/311 (60%), Gaps = 42/311 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNR++ AIV GVTRDR YG+S W EF L+DTGG +
Sbjct: 5 VAIVGRPNVGKSTLFNRMIKRREAIVDSVSGVTRDRHYGKSDWNGKEFSLIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G + I I++Q AI+E+ I+F+VD ++G
Sbjct: 62 ---------------VGSDDI-----------FEQEIDKQVELAIDEADAILFVVDVESG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T DEE+A+ LR+ ++K ++L VNK ++ + + +EF+SLG PI++I+G+GT
Sbjct: 96 VTGMDEEVANLLRR--VNKPVLLVVNKVDAANR-LHDATEFYSLGLGEYYPIASINGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GE+LD + L VE TE EEN +P A+VGRPN GKSS++NAL+GEDR IV+ I+G
Sbjct: 153 GEMLDALVEALPDVEETE----EEN-LPRFAVVGRPNAGKSSLINALIGEDRYIVTDIAG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT++ G +F L+DTAGIR++A + E SV R+ RAI SDV LV
Sbjct: 208 TTRDAIDTKYNR-FGFEFNLVDTAGIRRKAKVKED---LEFYSVMRSIRAIEHSDVCLLV 263
Query: 465 IEAMACITEQA 475
++A Q
Sbjct: 264 VDATRGFDSQV 274
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 86/188 (45%), Gaps = 37/188 (19%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E LPR A+VGRPN GKS+L N L+G +R IV D G TRD + + EF LVDT
Sbjct: 171 EENLPRFAVVGRPNAGKSSLINALIGEDRYIVTDIAGTTRDAIDTKYNRFGFEFNLVDTA 230
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIE S V + +
Sbjct: 231 GI----RRKAKVKEDLEFYSVM-----------------------RSIRAIEHSDVCLLV 263
Query: 280 VDGQAGLTAADEEIADWL-RKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFS 332
VD G + + I WL KN+ K I++ VNK + K V EF F+
Sbjct: 264 VDATRGFDSQVQNIF-WLAEKNH--KGIVILVNKWDLVEKDTSTVKEFEKHIRQQIEPFT 320
Query: 333 PLPISAIS 340
+PI IS
Sbjct: 321 DVPIVFIS 328
>gi|154686532|ref|YP_001421693.1| GTP-binding protein EngA [Bacillus amyloliquefaciens FZB42]
gi|375362798|ref|YP_005130837.1| GTP-binding protein engA [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|384265881|ref|YP_005421588.1| GTP-binding protein engA [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385265259|ref|ZP_10043346.1| GTP-binding protein EngA [Bacillus sp. 5B6]
gi|387898892|ref|YP_006329188.1| GTP-binding protein [Bacillus amyloliquefaciens Y2]
gi|394993529|ref|ZP_10386274.1| GTP-binding protein Der [Bacillus sp. 916]
gi|421731218|ref|ZP_16170344.1| GTP-binding protein Der [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451346531|ref|YP_007445162.1| GTP-binding protein Der [Bacillus amyloliquefaciens IT-45]
gi|452856044|ref|YP_007497727.1| GTPase essential for ribosome 50S subunit assembly [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|166224304|sp|A7Z636.1|DER_BACA2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|154352383|gb|ABS74462.1| EngA [Bacillus amyloliquefaciens FZB42]
gi|371568792|emb|CCF05642.1| GTP-binding protein engA [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|380499234|emb|CCG50272.1| GTP-binding protein engA [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385149755|gb|EIF13692.1| GTP-binding protein EngA [Bacillus sp. 5B6]
gi|387173002|gb|AFJ62463.1| GTP-binding protein [Bacillus amyloliquefaciens Y2]
gi|393805641|gb|EJD67015.1| GTP-binding protein Der [Bacillus sp. 916]
gi|407075372|gb|EKE48359.1| GTP-binding protein Der [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449850289|gb|AGF27281.1| GTP-binding protein Der [Bacillus amyloliquefaciens IT-45]
gi|452080304|emb|CCP22066.1| GTPase essential for ribosome 50S subunit assembly [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 436
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 191/315 (60%), Gaps = 48/315 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I +QA A++E+ VIIF+V+G+
Sbjct: 62 ----------------DIGDE--PFLTQ----------IRQQAEIAMDEADVIIFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ADEE+A L + K ++LAVNK ++ + +F++LGF P PIS G
Sbjct: 94 EGVTSADEEVAKILYRT--KKPVVLAVNKLDNTEMR-ANIYDFYALGFGEPYPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGT---EDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G G+LLD K + T +D+V+ ++GRPNVGKSS++NA++GE+R IV
Sbjct: 151 GLGDLLDACAEHFKNIPETKYSDDVVQ-------FCLIGRPNVGKSSLVNAMLGEERVIV 203
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S ++GTTRDA+DT FT + Q+F ++DTAG+RK+ + TTE SV RA +AI RSD
Sbjct: 204 SNVAGTTRDAVDTAFTYNQ-QEFVIVDTAGMRKKGKVY---ETTEKYSVLRALKAIDRSD 259
Query: 460 VVALVIEAMACITEQ 474
VV +V+ A I EQ
Sbjct: 260 VVGVVLNAEEGILEQ 274
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 33/174 (18%)
Query: 157 NVPEHL----LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
N+PE + + ++GRPNVGKS+L N ++G R IV + G TRD + + + E
Sbjct: 165 NIPETKYSDDVVQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTAFTYNQQE 224
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F++VDT G+ + + + E T + +V R A AI+
Sbjct: 225 FVIVDTAGM----RKKGKVYE---------------TTEKYSVLR--------ALKAIDR 257
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
S V+ +++ + G+ D+ IA + + K +++ VNK ++ K + EF
Sbjct: 258 SDVVGVVLNAEEGILEQDKRIAGYAHE--AGKAVVIIVNKWDAVDKDERTMKEF 309
>gi|297205894|ref|ZP_06923289.1| ribosome-associated GTPase EngA [Lactobacillus jensenii JV-V16]
gi|297149020|gb|EFH29318.1| ribosome-associated GTPase EngA [Lactobacillus jensenii JV-V16]
Length = 439
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 183/313 (58%), Gaps = 42/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVG+PNVGKS LFNR++ AIV D PGVTRDR Y ++ W HEF ++DTGG
Sbjct: 6 LPTVAIVGQPNVGKSTLFNRIINERLAIVEDRPGVTRDRNYAKASWLGHEFNIIDTGG-- 63
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I EG R+ I QA A+EE+ VI+ +
Sbjct: 64 ------------------ITWEG----------GRIEDEIRAQADIAMEEADVIVMITSV 95
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
LT DE IA L ++ K +ILAVNK ++P + + +F+SLG P+PIS+ G
Sbjct: 96 ALHLTDLDERIARILYRS--SKPVILAVNKADNPEQR-ADIYDFYSLGLGDPIPISSTHG 152
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD V T+D E+ I A +++GRPNVGKSSI+NA++G+ R IV+
Sbjct: 153 TGIGDLLDAVVENFPPEADTKD----EDEI-AFSVIGRPNVGKSSIINAMLGQKRVIVAN 207
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
GTTRDA+DT F +G KFR+IDTAGIR+R + TE SV RA AI+RSDVV
Sbjct: 208 EEGTTRDAVDTPFVAEDGTKFRMIDTAGIRRRGKVYEK---TEKYSVLRAQAAIQRSDVV 264
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 265 CLVLDASTGIREQ 277
>gi|392940711|ref|ZP_10306355.1| LOW QUALITY PROTEIN: ribosome-associated GTPase EngA
[Thermoanaerobacter siderophilus SR4]
gi|392292461|gb|EIW00905.1| LOW QUALITY PROTEIN: ribosome-associated GTPase EngA
[Thermoanaerobacter siderophilus SR4]
Length = 439
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 196/312 (62%), Gaps = 45/312 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS LFN+++G +IV D+PGVTRDR+YG + W + +F+LVDTGG+
Sbjct: 6 VSIVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRVYGNAEWLDKKFILVDTGGL---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
PN ED+ S + Q AAI+ S VI+FLVD + G
Sbjct: 62 --DPN-AEDILF----------------------SKVRLQVEAAIDASDVILFLVDAKEG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
L DEEIA+ LR+ K +IL NK +S ++ +F+SLG +P+PISA +G G
Sbjct: 97 LMPEDEEIANILRR--AKKEVILVCNKVDSFKEMPPTYYDFFSLGLGNPIPISASNGLGI 154
Query: 345 GELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GELLD V +L +++E TE+ ++ IA++G+PNVGKSS++N ++GE+R IVS I
Sbjct: 155 GELLDEVVKKLPQEELEYTEETIK-------IAVIGKPNVGKSSLVNKILGEERVIVSNI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F+ +G+ + LIDTAGIR+++ I+ S E SV RA AI RSD+
Sbjct: 208 PGTTRDAIDTPFS-KDGKNYVLIDTAGIRRKSRISES---IERYSVLRALAAIERSDICL 263
Query: 463 LVIEAMACITEQ 474
L+I+A TEQ
Sbjct: 264 LMIDATEGPTEQ 275
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 46/200 (23%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L N+++G R IV + PG TRD + ++L+DT G+
Sbjct: 178 KIAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER----QATAAIEESCVIIFLV 280
S R+ IER +A AAIE S + + ++
Sbjct: 238 S-------------------------------RISESIERYSVLRALAAIERSDICLLMI 266
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL--------GFS 332
D G T D +IA + +N K II+ VNK ++ +K V+E+ + F+
Sbjct: 267 DATEGPTEQDTKIAGYAFEN--GKGIIIVVNKWDAIKKDNNTVNEYTKMVREKLSFISFA 324
Query: 333 P-LPISAISGTGTGELLDLV 351
P L ISA +G +L+ V
Sbjct: 325 PILFISAKTGQRVHRVLETV 344
>gi|339451713|ref|ZP_08655083.1| GTP-binding protein Der [Leuconostoc lactis KCTC 3528]
Length = 437
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 185/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G AIV D+PGVTRDR+Y + W +EF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRMAGERIAIVEDQPGVTRDRLYAPAEWLNYEFRMIDTGGIE- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + E I Q A++E+ VI+ + G+
Sbjct: 63 -LGDEPFLAE----------------------------IRAQVELALDEADVIVMVTSGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ADE +A L K DK ++LAVNK ++P + +F+SLG P P+S G
Sbjct: 94 EGVTSADEVVAKMLYKT--DKPVVLAVNKVDNPEMR-QDIYDFYSLGLGEPYPVSGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V E E +E++ +I+GRPNVGKSSI+NA++GE+R IVS I
Sbjct: 151 GLGDLLDEVVKNFPD-EAAE---QEDDGAIRFSIIGRPNVGKSSIVNAILGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F PEG +F ++DTAG+RKR + + TE SV RA +AI S+VV
Sbjct: 207 EGTTRDAIDTRFVTPEGDEFIMVDTAGMRKRGKVYEN---TEKYSVMRALKAIDDSNVVL 263
Query: 463 LVIEAMACITEQ 474
+V++A A I EQ
Sbjct: 264 MVLDAEAGIREQ 275
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 41/207 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +I+GRPNVGKS++ N ++G R IV D G TRD + R E EF++VDT G+
Sbjct: 177 RFSIIGRPNVGKSSIVNAILGEERVIVSDIEGTTRDAIDTRFVTPEGDEFIMVDTAGMRK 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI++S V++ ++D +
Sbjct: 237 RGKVYEN-------------------TEKYSVMR--------ALKAIDDSNVVLMVLDAE 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG--------IMQVSEFWSLGFSPLP 335
AG+ D+ +A + + +I+ VNK ++ K M +EF L ++P+
Sbjct: 270 AGIREQDKHVAGSAHE--AGRAMIIVVNKWDAIEKDDHTMKDFENMIRAEFKFLDYAPI- 326
Query: 336 ISAISGTGTGELLDLVCSELKKVEGTE 362
TG+ LD + +K V+
Sbjct: 327 --VFVSAKTGQRLDRLPQMIKDVDANH 351
>gi|317128566|ref|YP_004094848.1| ribosome-associated GTPase EngA [Bacillus cellulosilyticus DSM
2522]
gi|315473514|gb|ADU30117.1| ribosome-associated GTPase EngA [Bacillus cellulosilyticus DSM
2522]
Length = 438
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 143/312 (45%), Positives = 188/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG AIV D+PGVTRDR+Y + W EF ++DTGG
Sbjct: 4 PVLAIVGRPNVGKSTIFNRIVGERIAIVEDKPGVTRDRIYSSAEWLNKEFNIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + PL + + QA AIEE+ VI F+V+G+
Sbjct: 61 -----------------IEINDEPLMVQ----------MRYQAELAIEEADVICFIVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ADEE+A L ++ K I+L VNK + P ++ EF+SLG P PIS G
Sbjct: 94 EGITSADEEVAQILFRS--KKPIVLGVNKMDDPSMH-DRLYEFYSLGIGDPKPISGSHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + TED+ +E+ I+I+GRPNVGKSS+ NA++GE+R IVS I
Sbjct: 151 GLGDLLDEVIKQFPS--QTEDVYDEDT--IRISIIGRPNVGKSSLTNAILGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F+ +GQ + +IDTAG+RK+ + S TE SV RA RAI RSDVV
Sbjct: 207 PGTTRDAIDTPFS-KDGQDYVVIDTAGMRKKGKVYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+VI + EQ
Sbjct: 263 MVINGEEGMIEQ 274
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV D PG TRD + +++++DT G+
Sbjct: 177 RISIIGRPNVGKSSLTNAILGEERVIVSDIPGTTRDAIDTPFSKDGQDYVVIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ +++G+
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALRAIERSDVVLMVINGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQV-----SEFWSLGFSPLP- 335
G+ D++IA + + + +IL VNK E K ++ EF L ++P+
Sbjct: 270 GMIEQDKKIAGYAHE--AGRAVILVVNKWDVVEKDDKTMLNFEQKLREEFLYLSYAPIIF 327
Query: 336 ISAISGTGTGELLDLV 351
+SA + LL LV
Sbjct: 328 LSAKTKRRMQHLLPLV 343
>gi|167040606|ref|YP_001663591.1| GTP-binding protein EngA [Thermoanaerobacter sp. X514]
gi|300914647|ref|ZP_07131963.1| ribosome-associated GTPase EngA [Thermoanaerobacter sp. X561]
gi|307724119|ref|YP_003903870.1| ribosome-associated GTPase EngA [Thermoanaerobacter sp. X513]
gi|238687595|sp|B0K3E4.1|DER_THEPX RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166854846|gb|ABY93255.1| small GTP-binding protein [Thermoanaerobacter sp. X514]
gi|300889582|gb|EFK84728.1| ribosome-associated GTPase EngA [Thermoanaerobacter sp. X561]
gi|307581180|gb|ADN54579.1| ribosome-associated GTPase EngA [Thermoanaerobacter sp. X513]
Length = 439
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 196/312 (62%), Gaps = 45/312 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS LFN+++G +IV D+PGVTRDR+YG + W + +F+LVDTGG+
Sbjct: 6 VSIVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRIYGNAEWLDKKFILVDTGGL---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
PN ED+ + S + Q AAI+ S VI+FLVD + G
Sbjct: 62 --DPN-AEDI----------------------LFSKVRLQVEAAIDTSDVILFLVDAKEG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
L DEEIA+ LR+ K +IL NK +S ++ +F+SLG +P+PISA +G G
Sbjct: 97 LMPEDEEIANILRR--AKKEVILVCNKVDSFKEMPPTYYDFFSLGLGNPIPISASNGLGI 154
Query: 345 GELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GELLD V L +++E TE+ ++ IA++G+PNVGKSS++N ++GE+R IVS I
Sbjct: 155 GELLDEVVKRLPQEELEYTEETIK-------IAVIGKPNVGKSSLVNKILGEERVIVSNI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F+ +G+ + LIDTAGIR+++ I+ S E SV RA AI RSD+
Sbjct: 208 PGTTRDAIDTPFS-KDGKNYVLIDTAGIRRKSRISES---IERYSVLRALAAIERSDICL 263
Query: 463 LVIEAMACITEQ 474
L+I+A TEQ
Sbjct: 264 LMIDATEGPTEQ 275
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 46/200 (23%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L N+++G R IV + PG TRD + ++L+DT G+
Sbjct: 178 KIAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER----QATAAIEESCVIIFLV 280
S R+ IER +A AAIE S + + ++
Sbjct: 238 S-------------------------------RISESIERYSVLRALAAIERSDICLLMI 266
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL--------GFS 332
D G T D +IA + +N K II+ VNK ++ +K V+E+ + F+
Sbjct: 267 DATEGPTEQDTKIAGYAFEN--GKGIIIVVNKWDAIKKDNNTVNEYTKMVREKLSFISFA 324
Query: 333 P-LPISAISGTGTGELLDLV 351
P L ISA +G +L+ V
Sbjct: 325 PILFISAKTGQRVHRVLETV 344
>gi|260881015|ref|ZP_05403389.2| ribosome-associated GTPase EngA [Mitsuokella multacida DSM 20544]
gi|260850181|gb|EEX70188.1| ribosome-associated GTPase EngA [Mitsuokella multacida DSM 20544]
Length = 445
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 191/312 (61%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN++ +IV D PGVTRDR+Y + W F ++DTGG+
Sbjct: 6 PIVAIVGRPNVGKSTLFNQIGKKRVSIVDDMPGVTRDRIYLDAEWLNQHFTMIDTGGI-E 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+S +I++ + +QA A++E+ VI+FLVDG+
Sbjct: 65 FDESN-HILKSM---------------------------RQQAQLAMDEADVILFLVDGR 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+GLT ADEE+A LR K +ILAVNK +SP++ M V EF++LG P+PISA +
Sbjct: 97 SGLTTADEEVARLLRST--KKPVILAVNKIDSPQRA-MDVYEFYNLGLGDPIPISASNAM 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD + + K E ++ +IA++GRPNVGKSSI+NA++GE+R IVS +
Sbjct: 154 NLGDLLDAIVAAFPKKEEEV----KDEDEISIAVIGRPNVGKSSIVNAILGEERVIVSDV 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT FT +G KF LIDTAG+R+R I E SV R+ RAI R+DVV
Sbjct: 210 PGTTRDAIDTHFT-KDGTKFTLIDTAGMRRRGKI---DEPVERYSVMRSLRAIDRADVVL 265
Query: 463 LVIEAMACITEQ 474
++I A ITEQ
Sbjct: 266 MMINAFEGITEQ 277
>gi|116618390|ref|YP_818761.1| GTP-binding protein EngA [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|381336764|ref|YP_005174539.1| GTP-binding protein Der [Leuconostoc mesenteroides subsp.
mesenteroides J18]
gi|122271410|sp|Q03WN4.1|DER_LEUMM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|116097237|gb|ABJ62388.1| Predicted GTPase [Leuconostoc mesenteroides subsp. mesenteroides
ATCC 8293]
gi|356644730|gb|AET30573.1| GTP-binding protein Der [Leuconostoc mesenteroides subsp.
mesenteroides J18]
Length = 436
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 181/312 (58%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G AIV D PGVTRDR+Y + W +EF ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRMAGERIAIVEDMPGVTRDRLYAPAEWLNYEFRMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I Q AI E+ VI+ +V G+
Sbjct: 62 ----------------------------EIGDAPFLAEIRGQVELAINEADVIVMVVSGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT ADE +A L K+ DK ++LAVNK ++P V +F++LG P P+S G
Sbjct: 94 EGLTEADEVVARMLYKS--DKPVVLAVNKVDNPEMR-HDVYDFYALGLGDPFPVSGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + ++ E+E+ +I+GRPNVGKSSI+NA++GE R IVS I
Sbjct: 151 GLGDLLDEIVKHFP-----DEAAEQEDDAIRFSIIGRPNVGKSSIVNAMLGEKRVIVSDI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F EG +F ++DTAG+RKR I + TE SV RA +AI S+V+
Sbjct: 206 EGTTRDAIDTRFVTEEGDEFVMVDTAGMRKRGKIYEN---TEKYSVMRAMKAIDDSNVIL 262
Query: 463 LVIEAMACITEQ 474
+VI+A A I EQ
Sbjct: 263 MVIDAEAGIREQ 274
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 37/202 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +I+GRPNVGKS++ N ++G R IV D G TRD + R E EF++VDT G+
Sbjct: 176 RFSIIGRPNVGKSSIVNAMLGEKRVIVSDIEGTTRDAIDTRFVTEEGDEFVMVDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI++S VI+ ++D +
Sbjct: 236 RGKIYEN-------------------TEKYSVMR--------AMKAIDDSNVILMVIDAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL---GFSPL---PIS 337
AG+ D+ +A + + + +I+ VNK ++ K +S+F +L F L PI
Sbjct: 269 AGIREQDKHVAGFAHE--AGRAMIIVVNKWDAIEKNDRTMSDFENLIREEFKFLDYAPIV 326
Query: 338 AISGTGTGELLDLVCSELKKVE 359
+S TG+ LD + +K V+
Sbjct: 327 FVSAK-TGQRLDRLPQMVKDVD 347
>gi|299473466|emb|CBN77863.1| PEngA, plastid EngA GTPase [Ectocarpus siliculosus]
Length = 680
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 192/315 (60%), Gaps = 40/315 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVG--GNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG 220
P VA++GRPNVGKS + NRL + +IV DE GVTRDR Y R+++ +F +VDTGG
Sbjct: 219 FPVVAVIGRPNVGKSTVVNRLAKRFKDGSIVFDESGVTRDRTYKRAWYCGKDFDVVDTGG 278
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ + +D +G + +E I +QA A+EE+ +I +V
Sbjct: 279 L---------VFDD---------KGGDVFAKE---------IRQQALIALEEATAVIMVV 311
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DG G D+EIA +LR+ + ++LAVNKCES + G +Q +EFW LG P PIS +
Sbjct: 312 DGIVGCNVLDQEIARFLRQQKVP--VVLAVNKCESQKYGEIQTAEFWCLGLGEPWPISGL 369
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G G +++D V L +V ++ EEE+ I +AIVGRPNVGKSS+LN L GE R+IV
Sbjct: 370 HGDGIYDMMDNVAEHLYEV---DENAEEEDNI-NVAIVGRPNVGKSSLLNRLFGETRSIV 425
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S + GTTRD+ID F G+ +RL+DTAGIR++ + E VNRAF+AIRR+D
Sbjct: 426 SDVPGTTRDSIDAMFE-RGGRTYRLVDTAGIRRKGKVDYG---NEFFMVNRAFKAIRRAD 481
Query: 460 VVALVIEAMACITEQ 474
VV L+++ A IT+Q
Sbjct: 482 VVLLMVDVEAGITDQ 496
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 75/167 (44%), Gaps = 40/167 (23%)
Query: 157 NVPEHLLP-----------RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR 205
NV EHL VAIVGRPNVGKS+L NRL G R+IV D PG TRD +
Sbjct: 380 NVAEHLYEVDENAEEEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAM 439
Query: 206 SFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQ 265
G + LVDT G+ K G E M+ R
Sbjct: 440 FERGGRTYRLVDTAGIRRKGK------------VDYGNEFF--------------MVNR- 472
Query: 266 ATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
A AI + V++ +VD +AG+T D +AD ++ + + ++ NK
Sbjct: 473 AFKAIRRADVVLLMVDVEAGITDQDRVLADRIQSD--GRACVVVCNK 517
>gi|319651358|ref|ZP_08005487.1| GTP-binding protein EngA [Bacillus sp. 2_A_57_CT2]
gi|317396889|gb|EFV77598.1| GTP-binding protein EngA [Bacillus sp. 2_A_57_CT2]
Length = 436
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 142/315 (45%), Positives = 191/315 (60%), Gaps = 48/315 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W H+F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERISIVEDIPGVTRDRIYSSAEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I QA AI+E+ VIIFLV+G+
Sbjct: 62 ----------------DIGDE--PFLEQ----------IRLQAEIAIDEADVIIFLVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ADEE+A L K K ++L VNK ++P + V +F++LGF P PIS G
Sbjct: 94 EGVTSADEEVAKILYK--AKKPVVLGVNKIDNPEMRDL-VYDFYALGFGEPFPISGSHGL 150
Query: 343 GTGELLDLVCSELKK---VEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G G+LLD K E ED+++ +++GRPNVGKSS++NA++GE+R IV
Sbjct: 151 GLGDLLDEAAKHFPKHGQTEYGEDVIK-------FSLIGRPNVGKSSLVNAMLGEERVIV 203
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S I+GTTRDAID++ +GQ++ +IDTAG+RK+ + TTE SV RA RAI RSD
Sbjct: 204 SNIAGTTRDAIDSK-VKVDGQEYVIIDTAGMRKKGKVY---ETTEKYSVLRALRAIERSD 259
Query: 460 VVALVIEAMACITEQ 474
VV +VI+ I EQ
Sbjct: 260 VVLVVIDGEEGIIEQ 274
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N ++G R IV + G TRD + + E++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSLVNAMLGEERVIVSNIAGTTRDAIDSKVKVDGQEYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIE S V++ ++DG+
Sbjct: 234 -RKKGKVYE---------------TTEKYSVLR--------ALRAIERSDVVLVVIDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + + +++ VNK ++ K
Sbjct: 270 GIIEQDKRIAGYAHE--AGRAVVIVVNKWDAVEK 301
>gi|251796400|ref|YP_003011131.1| GTP-binding protein EngA [Paenibacillus sp. JDR-2]
gi|247544026|gb|ACT01045.1| small GTP-binding protein [Paenibacillus sp. JDR-2]
Length = 440
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 138/314 (43%), Positives = 193/314 (61%), Gaps = 45/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG AIV D+PGVTRDR+Y W F +VDTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRVVGDRLAIVEDKPGVTRDRLYSPGEWNGKAFSIVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ IM+ + RM QA AIEE+ VIIF+ D +
Sbjct: 62 EIDGEDEIMKSV---------------------RM------QAELAIEEADVIIFMCDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
G+T AD+E+A L +++ K ++LAVNK ++ + + ++ EF+ LGF +P+ +S G
Sbjct: 95 TGVTHADDEVAQMLFRSH--KPVVLAVNKVDNLNR-MDEIYEFYGLGFGTPIAVSGSHGL 151
Query: 343 GTGELLDLVCSELKKVE--GTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G++LD +L ++E G +D + +A++GRPNVGKSS++NAL+GE+R IVS
Sbjct: 152 GIGDMLDAAIEKLPELEDDGYDD------DVIRVALIGRPNVGKSSLVNALLGEERVIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
++GTTRDAIDT F +GQK+ LIDTAG+RKR + S TE SV RA +AI R+DV
Sbjct: 206 NVAGTTRDAIDTPFE-RDGQKYVLIDTAGMRKRGKVYES---TEKYSVMRALKAIERADV 261
Query: 461 VALVIEAMACITEQ 474
V ++I I EQ
Sbjct: 262 VLVLINGEEGIIEQ 275
>gi|104773911|ref|YP_618891.1| GTP-binding protein EngA [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513918|ref|YP_812824.1| GTP-binding protein EngA [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|385815548|ref|YP_005851939.1| GTP-binding protein engA [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|418036542|ref|ZP_12674958.1| hypothetical protein LDBUL1519_01658 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|37999708|sp|Q8KH12.1|DER_LACDA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|122275312|sp|Q04AY6.1|DER_LACDB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|21633222|gb|AAM22484.1| conserved hypothetical GTP-binding protein [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
gi|103422992|emb|CAI97674.1| Putative GTP-binding protein [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116093233|gb|ABJ58386.1| Predicted GTPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|325125585|gb|ADY84915.1| Probable GTP-binding protein engA [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|354687592|gb|EHE87672.1| hypothetical protein LDBUL1519_01658 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 435
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 140/313 (44%), Positives = 184/313 (58%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVG+PNVGKS LFNR++ AIV D PGVTRDR Y R+ W H+F ++DTGG+
Sbjct: 3 LPIVAIVGQPNVGKSTLFNRIINERVAIVEDRPGVTRDRNYARASWMGHQFSIIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
ED +TI E I QA AIEE+ VI+ L D
Sbjct: 62 --------TWED----STIDEE-----------------IRAQAEIAIEEADVIVMLADA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+T+ DE IA L + DK ++LAVNK ++P + + +F+SLG P+P+S G
Sbjct: 93 SQGVTSLDERIAHLLYR--ADKPVLLAVNKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD V + D + E + + +++GRPNVGKSSI+N L+GE+R IV+
Sbjct: 150 TGIGDLLDEVVKNF-----SPDAEKTEEGVISFSVIGRPNVGKSSIVNRLLGEERVIVAN 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
GTTRDAIDT F +G KFR++DTAGIR+R + TE SV RA A+ RSDV
Sbjct: 205 EEGTTRDAIDTPFV-KDGTKFRVVDTAGIRRRGKVYEK---TEKYSVMRAMSAMERSDVA 260
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 261 ILVLDASTGIREQ 273
>gi|392394322|ref|YP_006430924.1| ribosome-associated GTPase EngA [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390525400|gb|AFM01131.1| ribosome-associated GTPase EngA [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 441
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 191/312 (61%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL GG AIV + PGVTRDR+Y S W +F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRLAGGLVAIVENRPGVTRDRLYRDSEWLGRKFTIIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+++ P + S + RQA AIEES VI+F++D Q
Sbjct: 64 VNENTP----------------------------ITSQMRRQAEIAIEESDVIVFVIDAQ 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
T D+ IA LR++ K +ILA NK E+ K ++ EF++LG P+PISA+ G
Sbjct: 96 ISPTPDDDMIAQTLRRS--GKPVILAANKVENFSK--TELYEFYNLGLGEPIPISAVHGM 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V S E E+ V+ + IA++GRPNVGKSS++N L+GE+R IVS I
Sbjct: 152 NIGDLLDEVISHFP--EEIEEEVDPDT--IRIAVIGRPNVGKSSLVNTLLGEERVIVSNI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID+ F +G+ + +IDTAG+R++ I TE SV+R+ RA+ RSDV+
Sbjct: 208 PGTTRDAIDSAFEH-DGKHYIIIDTAGMRRKGRIE---ELTEQYSVSRSLRAVDRSDVIL 263
Query: 463 LVIEAMACITEQ 474
++I+A +TEQ
Sbjct: 264 MLIDAGEGVTEQ 275
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++GRPNVGKS+L N L+G R IV + PG TRD + ++++DT G+
Sbjct: 178 RIAVIGRPNVGKSSLVNTLLGEERVIVSNIPGTTRDAIDSAFEHDGKHYIIIDTAGMRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ +E+L T + +V+R + A++ S VI+ L+D
Sbjct: 238 GR-----IEEL--------------TEQYSVSR--------SLRAVDRSDVILMLIDAGE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGF---SP-LP 335
G+T D++IA + + K I+L VNK + K ++ F LGF +P L
Sbjct: 271 GVTEQDKKIAGYAHE--AGKGIVLVVNKWDLIEKDDKTMNRFEKDIREELGFMQYAPTLF 328
Query: 336 ISAISGTGTGELLDLV 351
ISA +G +LL+LV
Sbjct: 329 ISAKTGQRVAKLLELV 344
>gi|326692494|ref|ZP_08229499.1| GTP-binding protein Der [Leuconostoc argentinum KCTC 3773]
Length = 437
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 185/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G AIV D+PGVTRDR+Y + W +EF ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRMAGERIAIVEDQPGVTRDRLYAPAEWLNYEFRMIDTGGIE- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + E I Q A++E+ VI+ + G+
Sbjct: 63 -LGDEPFLAE----------------------------IRAQVELALDEADVIVMVTSGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ADE +A L K DK ++LAVNK ++P + +F+SLG P P+S G
Sbjct: 94 EGVTSADEVVAKMLYKT--DKPVVLAVNKVDNPEMR-QDIYDFYSLGLGEPYPVSGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V E E +E++ +I+GRPNVGKSSI+NA++GE+R IVS I
Sbjct: 151 GLGDLLDEVVKNFPD-EAAE---QEDDGAIRFSIIGRPNVGKSSIVNAILGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F PEG +F ++DTAG+RKR + + TE SV RA +AI S+VV
Sbjct: 207 EGTTRDAIDTRFVTPEGDEFIMVDTAGMRKRGKVYEN---TEKYSVMRALKAIDDSNVVL 263
Query: 463 LVIEAMACITEQ 474
+V++A A I EQ
Sbjct: 264 MVLDAEAGIREQ 275
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 37/205 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +I+GRPNVGKS++ N ++G R IV D G TRD + R E EF++VDT G+
Sbjct: 177 RFSIIGRPNVGKSSIVNAILGEERVIVSDIEGTTRDAIDTRFVTPEGDEFIMVDTAGMRK 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI++S V++ ++D +
Sbjct: 237 RGKVYEN-------------------TEKYSVMR--------ALKAIDDSNVVLMVLDAE 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL---GFSPL---PIS 337
AG+ D+ +A + + + +I+ VNK ++ K + +F +L F L PI
Sbjct: 270 AGIREQDKHVAGFAHE--AGRAMIIVVNKWDAIEKDDHTMKDFENLIRAEFKFLDYAPIV 327
Query: 338 AISGTGTGELLDLVCSELKKVEGTE 362
+S TG+ LD + +K V+
Sbjct: 328 FVSAK-TGQRLDRLPQMIKDVDANH 351
>gi|319892465|ref|YP_004149340.1| GTP-binding protein EngA [Staphylococcus pseudintermedius HKU10-03]
gi|386319261|ref|YP_006015424.1| GTP-binding protein EngA [Staphylococcus pseudintermedius ED99]
gi|317162161|gb|ADV05704.1| GTP-binding protein EngA [Staphylococcus pseudintermedius HKU10-03]
gi|323464432|gb|ADX76585.1| GTP-binding protein EngA [Staphylococcus pseudintermedius ED99]
Length = 436
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 189/314 (60%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAIS 340
G+T DE +A L K+ K ++LAVNK ++P R I +F+SLGF P P+S
Sbjct: 94 EGVTQNDELVAQILYKS--KKPVVLAVNKVDNPDMRNDIY---DFYSLGFGEPFPLSGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G+LL+ V KK T D +++ ++++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGLGDLLEEVAKHFKK--DTSDPYDDDT--IRLSLIGRPNVGKSSLINAILGEERVIVS 204
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I+GTTRDAIDT ++ EGQ + LIDTAG+RK+ + S TE SV RA +AI RS+V
Sbjct: 205 NIAGTTRDAIDTVYS-YEGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNV 260
Query: 461 VALVIEAMACITEQ 474
V +V++A I EQ
Sbjct: 261 VLVVLDAEQGIIEQ 274
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++++GRPNVGKS+L N ++G R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSLIGRPNVGKSSLINAILGEERVIVSNIAGTTRDAIDTVYSYEGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVLDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K I++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTLEKDSNTMKKF 309
>gi|89894997|ref|YP_518484.1| GTP-binding protein EngA [Desulfitobacterium hafniense Y51]
gi|122482578|sp|Q24VA2.1|DER_DESHY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|89334445|dbj|BAE84040.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 441
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 140/313 (44%), Positives = 191/313 (61%), Gaps = 43/313 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL GG AIV + PGVTRDR+Y S W +F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRLAGGLVAIVENRPGVTRDRLYRDSEWLGRKFTIIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+++ P + + + RQA AIEE+ VI+F++D Q
Sbjct: 64 VNENTP----------------------------ITAQMRRQAEIAIEEADVIVFVIDAQ 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
T D+ IA LR++ K +ILA NK E+ K ++ EF++LG P+PISA+ G
Sbjct: 96 ISPTPDDDMIAQTLRRS--GKPVILAANKVENFAK--TELYEFYNLGLGEPVPISAVHGM 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEE-ENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G+LLD V S ED+ EE + IA+VGRPNVGKSS++N L+GE+R IVS
Sbjct: 152 NIGDLLDEVVSHFP-----EDIEEEVDPDTIRIAVVGRPNVGKSSLVNTLLGEERVIVSN 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRDAID+ F EG+ + +IDTAG+R++ I TE SV+R+ RA+ RSDV+
Sbjct: 207 IPGTTRDAIDSAFEH-EGKHYIIIDTAGMRRKGRIE---ELTEQYSVSRSLRAVDRSDVI 262
Query: 462 ALVIEAMACITEQ 474
++++A +TEQ
Sbjct: 263 LMLLDAGEGVTEQ 275
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
R+A+VGRPNVGKS+L N L+G R IV + PG TRD + +F EHE ++++DT G+
Sbjct: 178 RIAVVGRPNVGKSSLVNTLLGEERVIVSNIPGTTRDAI-DSAF--EHEGKHYIIIDTAGM 234
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +E+L T + +V+R + A++ S VI+ L+D
Sbjct: 235 RRKGR-----IEEL--------------TEQYSVSR--------SLRAVDRSDVILMLLD 267
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGF---SP 333
G+T D++IA + + K I+L VNK + K ++ F LGF +P
Sbjct: 268 AGEGVTEQDKKIAGYAHE--AGKGIVLVVNKWDLIEKDDKTMNRFEKDIREELGFMQYAP 325
Query: 334 -LPISAISGTGTGELLDLV 351
L ISA +G +LLDLV
Sbjct: 326 TLFISAKTGQRVTKLLDLV 344
>gi|423073655|ref|ZP_17062394.1| ribosome biogenesis GTPase Der [Desulfitobacterium hafniense DP7]
gi|361855496|gb|EHL07464.1| ribosome biogenesis GTPase Der [Desulfitobacterium hafniense DP7]
Length = 444
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/313 (44%), Positives = 191/313 (61%), Gaps = 43/313 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL GG AIV + PGVTRDR+Y S W +F ++DTGG+
Sbjct: 7 PVVAIVGRPNVGKSTLFNRLAGGLVAIVENRPGVTRDRLYRDSEWLGRKFTIIDTGGIEF 66
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+++ P + + + RQA AIEE+ VI+F++D Q
Sbjct: 67 VNENTP----------------------------ISAQMRRQAEIAIEEADVIVFVIDAQ 98
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
T D+ IA LR++ K +ILA NK E+ K ++ EF++LG P+PISA+ G
Sbjct: 99 ISPTPDDDMIAQTLRRS--GKPVILAANKVENFAK--TELYEFYNLGLGEPVPISAVHGM 154
Query: 343 GTGELLDLVCSELKKVEGTEDLVEE-ENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G+LLD V S ED+ EE + IA+VGRPNVGKSS++N L+GE+R IVS
Sbjct: 155 NIGDLLDEVVSHFP-----EDIEEEVDPDTIRIAVVGRPNVGKSSLVNTLLGEERVIVSN 209
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRDAID+ F EG+ + +IDTAG+R++ I TE SV+R+ RA+ RSDV+
Sbjct: 210 IPGTTRDAIDSAFEH-EGKHYIIIDTAGMRRKGRIE---ELTEQYSVSRSLRAVDRSDVI 265
Query: 462 ALVIEAMACITEQ 474
++++A +TEQ
Sbjct: 266 LMLLDAGEGVTEQ 278
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
R+A+VGRPNVGKS+L N L+G R IV + PG TRD + +F EHE ++++DT G+
Sbjct: 181 RIAVVGRPNVGKSSLVNTLLGEERVIVSNIPGTTRDAI-DSAF--EHEGKHYIIIDTAGM 237
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +E+L T + +V+R + A++ S VI+ L+D
Sbjct: 238 RRKGR-----IEEL--------------TEQYSVSR--------SLRAVDRSDVILMLLD 270
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGF---SP 333
G+T D++IA + + K I+L VNK + K ++ F LGF +P
Sbjct: 271 AGEGVTEQDKKIAGYAHE--AGKGIVLVVNKWDLIEKDDKTMNRFEKDIREELGFMQYAP 328
Query: 334 -LPISAISGTGTGELLDLV 351
L ISA +G +LLDLV
Sbjct: 329 TLFISAKTGQRVTKLLDLV 347
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 372 PAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI--DTEFTGPEGQKFRLIDTAG 429
P +AIVGRPNVGKS++ N L G IV G TRD + D+E+ G+KF +IDT G
Sbjct: 7 PVVAIVGRPNVGKSTLFNRLAGGLVAIVENRPGVTRDRLYRDSEWL---GRKFTIIDTGG 63
Query: 430 IRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQAD 476
I + + A +A AI +DV+ VI+A T D
Sbjct: 64 IE----FVNENTPISAQMRRQAEIAIEEADVIVFVIDAQISPTPDDD 106
>gi|197302999|ref|ZP_03168047.1| hypothetical protein RUMLAC_01725 [Ruminococcus lactaris ATCC
29176]
gi|197297854|gb|EDY32406.1| ribosome biogenesis GTPase Der [Ruminococcus lactaris ATCC 29176]
Length = 442
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 192/312 (61%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + EF L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAGEMISIVKDTPGVTRDRIYADVDWLDREFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ +R+ +++M QA AI+ + VIIF+ D +
Sbjct: 62 ----EPD-------------------SRDIILSQM----REQAQIAIDTADVIIFITDVK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR++ K ++L VNK ++ K + V EF++LG P+PISA S
Sbjct: 95 QGLVDSDSKVADMLRRS--GKPVVLVVNKVDNFDKYMADVYEFYNLGIGDPIPISAASRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + + +GTE E+++R P +AIVG+PNVGKSSI+N L+GE+R IVS I
Sbjct: 153 GLGDMLDAVIAHFPESDGTE---EDDDR-PRVAIVGKPNVGKSSIINRLLGENRVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE G+++ IDTAG+R++ I E S+ R A+ R+DVV
Sbjct: 209 AGTTRDAIDTEIVH-NGKEYVFIDTAGLRRKNKIKEE---LERYSIIRTVSAVERADVVL 264
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 265 MVIDATEGVTEQ 276
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PRVAIVG+PNVGKS++ NRL+G NR IV D G TRD + E++ +DT G+
Sbjct: 178 PRVAIVGKPNVGKSSIINRLLGENRVIVSDIAGTTRDAIDTEIVHNGKEYVFIDTAGL-- 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E+L + I + +A+E + V++ ++D
Sbjct: 236 --RRKNKIKEELERYSII-----------------------RTVSAVERADVVLMVIDAT 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP----L 334
G+T D +IA + K +I+ VNK ++ K + E+ + L + P +
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGVIIVVNKWDAIEKNDKTMREYEAKIRQVLSYMPYAEIM 328
Query: 335 PISAISGTGTGELLDLV 351
+SA++G +L D++
Sbjct: 329 YVSAMTGQRLPKLYDMI 345
>gi|392425150|ref|YP_006466144.1| ribosome-associated GTPase EngA [Desulfosporosinus acidiphilus SJ4]
gi|391355113|gb|AFM40812.1| ribosome-associated GTPase EngA [Desulfosporosinus acidiphilus SJ4]
Length = 443
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 191/312 (61%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ GG AIV ++PGVTRDR+Y + W +F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGGLVAIVENKPGVTRDRLYRDAEWLGRKFALIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
EG P+A + + RQA A+EE+ V+IF+VD Q
Sbjct: 62 ----------------EFKAEGTPIA----------AQMRRQAEIAMEEADVVIFVVDAQ 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
T D+ IA LR++ K ++LA NK E+ K Q+ +F +LG P+PISA+ G
Sbjct: 96 LAPTPDDDLIARTLRRS--GKPVLLAANKVENFEKAEGQLYDFLTLGLGEPIPISAVHGM 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD+V S L + +G ++ + I I+++GRPNVGKSS++N ++G++R IVS I
Sbjct: 154 NMGDLLDMVVSNLPENDGEDN----DPDIIRISVIGRPNVGKSSLVNTMLGKERVIVSNI 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F EG+ + LIDTAG+R++ I TE SV R+ A+ RSDV+
Sbjct: 210 PGTTRDAIDTPFEF-EGKNYILIDTAGMRRKGRIE---ELTEQYSVVRSLHAVDRSDVIL 265
Query: 463 LVIEAMACITEQ 474
++++A +TEQ
Sbjct: 266 MLLDATEGVTEQ 277
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++++GRPNVGKS+L N ++G R IV + PG TRD + + ++L+DT G+
Sbjct: 180 RISVIGRPNVGKSSLVNTMLGKERVIVSNIPGTTRDAIDTPFEFEGKNYILIDTAGMRRK 239
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ +E+L T + +V R + A++ S VI+ L+D
Sbjct: 240 GR-----IEEL--------------TEQYSVVR--------SLHAVDRSDVILMLLDATE 272
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
G+T D++IA + K I++ VNK + K +++F L ++P +
Sbjct: 273 GVTEQDKKIAGYAHD--AGKAIVIVVNKWDLVEKDEKTINKFEKTIREELGFLQYAPTMF 330
Query: 336 ISAISGTGTGELLDLV 351
ISA +G ++L+LV
Sbjct: 331 ISAKTGQRVHKILELV 346
>gi|227431693|ref|ZP_03913723.1| GTP-binding protein EngA [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
gi|227352517|gb|EEJ42713.1| GTP-binding protein EngA [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
Length = 436
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 181/312 (58%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G AIV D PGVTRDR+Y + W +EF ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRMAGERIAIVEDMPGVTRDRLYAPAEWLNYEFRMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I Q AI E+ VI+ +V G+
Sbjct: 62 ----------------------------EIGDAPFLAEIRGQVELAINEADVIVMVVSGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT ADE +A L K+ DK ++LAVNK ++P V +F++LG P P+S G
Sbjct: 94 EGLTEADEVVARMLYKS--DKPVVLAVNKVDNPEMR-HDVYDFYALGLGDPFPVSGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + ++ E+E+ +I+GRPNVGKSSI+NA++GE R IVS I
Sbjct: 151 GLGDLLDEIVKHF-----PDEAAEQEDDAIRFSIIGRPNVGKSSIVNAMLGEKRVIVSDI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F EG +F ++DTAG+RKR I + TE SV RA +AI S+V+
Sbjct: 206 EGTTRDAIDTRFVTEEGDEFVMVDTAGMRKRGKIYEN---TEKYSVMRAMKAIDDSNVIL 262
Query: 463 LVIEAMACITEQ 474
+VI+A A I EQ
Sbjct: 263 MVIDAEAGIREQ 274
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 37/202 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +I+GRPNVGKS++ N ++G R IV D G TRD + R E EF++VDT G+
Sbjct: 176 RFSIIGRPNVGKSSIVNAMLGEKRVIVSDIEGTTRDAIDTRFVTEEGDEFVMVDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI++S VI+ ++D +
Sbjct: 236 RGKIYEN-------------------TEKYSVMR--------AMKAIDDSNVILMVIDAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL---GFSPL---PIS 337
AG+ D+ +A + + + +I+ VNK ++ K +S+F +L F L PI
Sbjct: 269 AGIREQDKHVAGFAHE--AGRAMIIVVNKWDAIEKNDRTMSDFENLIREEFKFLDYAPIV 326
Query: 338 AISGTGTGELLDLVCSELKKVE 359
+S TG+ LD + +K V+
Sbjct: 327 FVSAK-TGQRLDRLPQMVKDVD 347
>gi|332686552|ref|YP_004456326.1| GTP-binding protein EngA [Melissococcus plutonius ATCC 35311]
gi|332370561|dbj|BAK21517.1| GTP-binding protein EngA [Melissococcus plutonius ATCC 35311]
Length = 436
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 184/312 (58%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W F ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDVPGVTRDRIYATGEWLGQAFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
DL I I++QA AIEE+ VI+F+ +
Sbjct: 62 ----------DLGNEPFI------------------EQIKQQAEIAIEEADVILFITSIR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE +A L ++ +K IILAVNK ++P +V EF+SLG P+PIS G
Sbjct: 94 EGITDADELVAKILYRS--NKPIILAVNKADNPELR-SEVYEFYSLGLGDPIPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD + + E ED + +++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GIGDMLDEAINYFSQEEIEEDEDIIK-----FSLIGRPNVGKSSLINAILGEERVIVSEI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT FT P GQKF +IDTAG+RKR + + TE SV RA RAI RSD+V
Sbjct: 206 EGTTRDAIDTYFTSPNGQKFLMIDTAGMRKRGKVYEN---TEKYSVMRAMRAIERSDIVL 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 MVLNAQEGIREQ 274
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 32/164 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R IV + G TRD + Y S G+ +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIVSEIEGTTRDAIDTYFTSPNGQ-KFLMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AIE S +++ +++
Sbjct: 235 KRGKVYEN-------------------TEKYSVMR--------AMRAIERSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
Q G+ D+ +A + + + II+ VNK ++ K + EF
Sbjct: 268 QEGIREQDKRVAGYAHE--AGRGIIILVNKWDAVEKETNTLHEF 309
>gi|227515173|ref|ZP_03945222.1| GTP-binding protein EngA [Lactobacillus fermentum ATCC 14931]
gi|227086505|gb|EEI21817.1| GTP-binding protein EngA [Lactobacillus fermentum ATCC 14931]
Length = 437
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/311 (42%), Positives = 187/311 (60%), Gaps = 42/311 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G AIV D PGVTRDR+Y W F ++DTGG
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGERIAIVEDTPGVTRDRLYAHGEWLGKNFSMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I M PL T+ I +QA AIEE+ VII +V+ +
Sbjct: 61 -----------------IEMSDQPLLTQ----------IRQQAEIAIEEADVIIMVVNVE 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K ++LAVNK ++P + + V +F+ LG P P+S++ G
Sbjct: 94 NGVTDADEQVAQILYRS--NKPVVLAVNKVDNPERR-LDVYDFYQLGLGEPYPVSSVHGV 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V E EEEN + +GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDMLDAVIENF-----AEKDAEEENDRIRFSFIGRPNVGKSSLVNAILGENRVIVSDM 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAI+T+FT +G++F ++DTAGI+K+ + + TE ++ R+ RAI SDVV
Sbjct: 206 AGTTRDAINTQFTAKDGREFTMVDTAGIKKKGKLYEN---TERYALMRSMRAIDDSDVVL 262
Query: 463 LVIEAMACITE 473
+V+ A I E
Sbjct: 263 VVLNAEEGIRE 273
>gi|150390617|ref|YP_001320666.1| GTP-binding protein EngA [Alkaliphilus metalliredigens QYMF]
gi|166920095|sp|A6TS39.1|DER_ALKMQ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|149950479|gb|ABR49007.1| small GTP-binding protein [Alkaliphilus metalliredigens QYMF]
Length = 440
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 191/312 (61%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+++G +IV D+PGVTRDR+Y W +H F L+DTGG
Sbjct: 4 PIVAIVGRPNVGKSTLFNKIIGHRISIVEDQPGVTRDRIYAEVEWLDHYFTLIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I T E +P+ + QA AIE + V +F+VDG+
Sbjct: 61 ----------------------IDADTEEI----IPAQMREQAQLAIETADVTVFMVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT +D E+A+ LRK++ K ++LA+NK ++ + + EF+ LG P+ IS+ G
Sbjct: 95 AGLTTSDREVAEMLRKSH--KPVLLAMNKVDTSNR-LDSFYEFYELGIGDPIEISSAQGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + + +G V ++ + +AI+G+PNVGKSSI+N+++GE+R IVS I
Sbjct: 152 GIGDLLDEIVKHFPENKG----VIYDDDVIKVAIIGKPNVGKSSIVNSILGENRVIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F E Q + LIDTAG+R+++ I + E SV R+ A+ R+DV
Sbjct: 208 AGTTRDAIDTPFNDGEDQ-YVLIDTAGLRRKSKIKEN---IEKYSVIRSIAAVERADVCL 263
Query: 463 LVIEAMACITEQ 474
LVI+A +TEQ
Sbjct: 264 LVIDATEGVTEQ 275
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PNVGKS++ N ++G NR IV D G TRD + GE +++L+DT G+
Sbjct: 178 KVAIIGKPNVGKSSIVNSILGENRVIVSDIAGTTRDAIDTPFNDGEDQYVLIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + NI E ++ +I AA+E + V + ++D
Sbjct: 238 SKIKENI-EKYSVIRSI--------------------------AAVERADVCLLVIDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE-------SPRKGIMQV-SEFWSLGFSP-LP 335
G+T D ++A + +N K I+ VNK + + K I ++ +E L ++P L
Sbjct: 271 GVTEQDTKVAGFSHEN--GKGTIIVVNKWDLIEKDNNTMNKFIKEIRTELAYLSYAPILF 328
Query: 336 ISAISGTGTGELLDLV 351
ISA++ ++L+ V
Sbjct: 329 ISALTRQRMPKVLETV 344
>gi|385812294|ref|YP_005848685.1| GTP-binding protein engA [Lactobacillus fermentum CECT 5716]
gi|299783191|gb|ADJ41189.1| GTP-binding protein engA [Lactobacillus fermentum CECT 5716]
Length = 370
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/311 (42%), Positives = 191/311 (61%), Gaps = 42/311 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G AIV D PGVTRDR+Y W F ++DTGG
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGERIAIVEDTPGVTRDRLYAHGEWLGKNFSMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I M PL T+ I +QA AIEE+ VII +V+ +
Sbjct: 61 -----------------IEMSDQPLLTQ----------IRQQAEIAIEEADVIIMVVNVE 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K ++LAVNK ++P + + V +F+ LG P P+S++ G
Sbjct: 94 NGVTDADEQVAQILYRS--NKPVVLAVNKVDNPERR-LDVYDFYQLGLGEPYPVSSVHGV 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + +D EE++RI + +GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDMLDAVIENFVE----KDAEEEDDRI-RFSFIGRPNVGKSSLVNAILGENRVIVSDM 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAI+T+FT +G++F ++DTAGI+K+ + + TE ++ R+ RAI SDVV
Sbjct: 206 AGTTRDAINTQFTAKDGREFTMVDTAGIKKKGKLYEN---TERYALMRSMRAIDDSDVVL 262
Query: 463 LVIEAMACITE 473
+V+ A I E
Sbjct: 263 VVLNAEEGIRE 273
>gi|221632763|ref|YP_002521985.1| GTP-binding protein EngA [Thermomicrobium roseum DSM 5159]
gi|254783175|sp|B9KZ43.1|DER_THERP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|221155859|gb|ACM04986.1| ribosome-associated GTPase EngA [Thermomicrobium roseum DSM 5159]
Length = 460
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 145/313 (46%), Positives = 184/313 (58%), Gaps = 34/313 (10%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP+VAIVGRPNVGKS LFNRL+ RAIV + PG TRDR+YG W + F L DTGG+L
Sbjct: 3 LPQVAIVGRPNVGKSTLFNRLLRQRRAIVEEVPGTTRDRIYGIVEWNDLRFGLFDTGGLL 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + +L T + QA AI E+ ++IF+VD
Sbjct: 63 TEEEIERSSERELVEAT-----------------------KAQAELAIAEADLVIFVVDA 99
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
AG TA D E+AD+LR+ DK I+L NK ES R+ +F+ LG P+P+SA+ G
Sbjct: 100 SAGPTAGDWEVADFLRRT--DKPILLVANKAES-REREFNALQFYELGLGDPIPVSALHG 156
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G +LLD + L + E ED E P IAIVGRPNVGKS++LNA++G+ R IVSP
Sbjct: 157 RGIADLLDAIAERLPRRE--EDGTAEAE-APKIAIVGRPNVGKSALLNAILGQPRQIVSP 213
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRDA+DTE +GQ LIDTAGIR+ I E S+ RA RAI RSDV
Sbjct: 214 IPGTTRDAVDTELVW-KGQPIVLIDTAGIRRPGRIERG---IERYSILRAERAIERSDVA 269
Query: 462 ALVIEAMACITEQ 474
LV++A T Q
Sbjct: 270 ILVVDATEPFTHQ 282
>gi|167037254|ref|YP_001664832.1| GTP-binding protein EngA [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256752010|ref|ZP_05492879.1| small GTP-binding protein [Thermoanaerobacter ethanolicus CCSD1]
gi|320115673|ref|YP_004185832.1| ribosome-associated GTPase EngA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|238687651|sp|B0K8N3.1|DER_THEP3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166856088|gb|ABY94496.1| small GTP-binding protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256749120|gb|EEU62155.1| small GTP-binding protein [Thermoanaerobacter ethanolicus CCSD1]
gi|319928764|gb|ADV79449.1| ribosome-associated GTPase EngA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 439
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 195/312 (62%), Gaps = 45/312 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS LFN+++G +IV D+PGVTRDR+YG W + +F+LVDTGG+
Sbjct: 6 VSIVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRIYGNVEWLDKKFILVDTGGL---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
PN ED+ S + Q AAI+ S VI+FLVD + G
Sbjct: 62 --DPN-AEDILF----------------------SKVRLQVEAAIDASDVILFLVDAKEG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
L DEEIA+ LR+ K +IL NK +S ++ +F+SLG +P+PISA +G G
Sbjct: 97 LMPEDEEIANILRR--AKKEVILVCNKVDSFKEMPPTYYDFFSLGLGNPIPISASNGLGI 154
Query: 345 GELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GELLD V +L +++E TE+ ++ IA++G+PNVGKSS++N ++GE+R IVS I
Sbjct: 155 GELLDEVVKKLPQEELEYTEETIK-------IAVIGKPNVGKSSLVNKILGEERVIVSNI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F+ +G+ + LIDTAGIR+++ I+ S E SV RA AI RSD+
Sbjct: 208 PGTTRDAIDTPFS-KDGKNYVLIDTAGIRRKSRISES---IERYSVLRALAAIERSDICL 263
Query: 463 LVIEAMACITEQ 474
L+I+A TEQ
Sbjct: 264 LMIDATEGPTEQ 275
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 46/200 (23%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L N+++G R IV + PG TRD + ++L+DT G+
Sbjct: 178 KIAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER----QATAAIEESCVIIFLV 280
S R+ IER +A AAIE S + + ++
Sbjct: 238 S-------------------------------RISESIERYSVLRALAAIERSDICLLMI 266
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL--------GFS 332
D G T D +IA + +N K II+ VNK ++ +K V+E+ + F+
Sbjct: 267 DATEGPTEQDTKIAGYAFEN--GKGIIIVVNKWDAIKKDNNTVNEYTKMVREKLSFISFA 324
Query: 333 P-LPISAISGTGTGELLDLV 351
P L ISA +G +L+ V
Sbjct: 325 PILFISAKTGQRVHRVLETV 344
>gi|402299917|ref|ZP_10819480.1| GTP-binding protein Der [Bacillus alcalophilus ATCC 27647]
gi|401724956|gb|EJS98278.1| GTP-binding protein Der [Bacillus alcalophilus ATCC 27647]
Length = 437
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG AIV D PGVTRDR+Y + W +F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVAIVEDMPGVTRDRLYSKGEWLNRDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+G E + + RE QA AI+E+ VI+F+V+G+
Sbjct: 62 ----------------ELGDEPLLVQMRE------------QAELAIKEADVIVFIVNGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T AD+E+A L ++ K ++L VNK ++P ++ EF+SLG P PIS G
Sbjct: 94 EGITGADQEVAKLLFRS--KKPVVLGVNKIDNPEMR-EELYEFYSLGIGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + +G + + I+++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GLGDLLDAVIEYFPEDDGDD----YDEETIRISLIGRPNVGKSSLVNAMLGEERVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT FT E QK+ LIDTAG+RKR + S TE SV R+ +AI RS+VV
Sbjct: 207 PGTTRDAIDTPFTKDE-QKYVLIDTAGMRKRGKVYES---TEKYSVLRSLKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI A I EQ
Sbjct: 263 IVINAEEGIIEQ 274
>gi|392972152|ref|ZP_10337544.1| GTPase Der [Staphylococcus equorum subsp. equorum Mu2]
gi|403046522|ref|ZP_10901991.1| GTP-binding protein EngA [Staphylococcus sp. OJ82]
gi|392509865|emb|CCI60846.1| GTPase Der [Staphylococcus equorum subsp. equorum Mu2]
gi|402763218|gb|EJX17311.1| GTP-binding protein EngA [Staphylococcus sp. OJ82]
Length = 436
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 189/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+ES VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEVAIDESDVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +D+ +A L K+ K ++LAVNK ++P ++ +F++LGF P PIS G
Sbjct: 94 EGLTQSDQVVAQMLYKS--KKPVVLAVNKVDNPEMR-NEIYDFYALGFGDPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K+ E+ ++ ++I+GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GLGDLLDEVVKHFKE----EEPDPYDDDTIRLSIIGRPNVGKSSLVNAILGEERVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT++T + Q + LIDTAG+RK+ + + TE SV RA +AI RS+V+
Sbjct: 207 AGTTRDAVDTQYTY-DDQDYVLIDTAGMRKKGKVYEN---TEKYSVLRALKAIERSNVIL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDADQGIIEQ 274
>gi|291563224|emb|CBL42040.1| ribosome-associated GTPase EngA [butyrate-producing bacterium
SS3/4]
Length = 441
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 189/313 (60%), Gaps = 42/313 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAGSTISIVKDTPGVTRDRIYADCTWLNNNFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ +++ +A+M QA AI+ + VIIF+VD +
Sbjct: 62 ----EPD-------------------SKDIILAQM----REQAQIAIDTADVIIFIVDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD ++AD LRK+ K ++LAVNK +S K V EF++LG P+P+SA S
Sbjct: 95 QGLVDADSKVADMLRKS--KKPVVLAVNKVDSMAKFGNDVYEFYNLGIGDPVPVSAASRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEE-ENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G GELLD V + ED ++ E+ P IAIVG+PNVGKSSI+N L+GE+R IVS
Sbjct: 153 GLGELLDEVVKYFR-----EDQYDDSEDDRPRIAIVGKPNVGKSSIINKLLGENRVIVSN 207
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDA+DTE G ++ IDTAG+R+++ I E S+ R A+ R+DVV
Sbjct: 208 IAGTTRDAVDTEIV-RNGTEYIFIDTAGLRRKSKIKED---IERYSIIRTVTAVERADVV 263
Query: 462 ALVIEAMACITEQ 474
+VI+A+ ITEQ
Sbjct: 264 LMVIDAVEGITEQ 276
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVG+PNVGKS++ N+L+G NR IV + G TRD + E++ +DT G+
Sbjct: 178 PRIAIVGKPNVGKSSIINKLLGENRVIVSNIAGTTRDAVDTEIVRNGTEYIFIDTAGLRR 237
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + +I E +I T+ A+E + V++ ++D
Sbjct: 238 KSKIKEDI-ERYSIIRTV--------------------------TAVERADVVLMVIDAV 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSPLP--- 335
G+T D +IA K +I+ VNK ++ K + E+ +L + P
Sbjct: 271 EGITEQDAKIAGIAHDR--GKGVIVVVNKWDAIEKNDKTIYEYTRKLKETLSYMPYAEYI 328
Query: 336 -ISAISGTGTGELLDLV 351
+SA++G +L +L+
Sbjct: 329 FVSALTGQRMEKLFELI 345
>gi|435854304|ref|YP_007315623.1| ribosome-associated GTPase EngA [Halobacteroides halobius DSM 5150]
gi|433670715|gb|AGB41530.1| ribosome-associated GTPase EngA [Halobacteroides halobius DSM 5150]
Length = 438
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 190/315 (60%), Gaps = 46/315 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+VG +IV DEP +TRDR+Y + W F++VDTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIVGSRISIVEDEPSITRDRIYADAEWLGRPFLMVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E++ +M + QA AIEE+ VI+F VD +
Sbjct: 62 ------EFNEEV---------------------KMKEKMRYQAEIAIEEADVILFTVDIR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP-ISAISGT 342
GLT D+EIA+ LRK DK +I+A NK E+ ++ + +F+ LGFS + +SA G
Sbjct: 95 DGLTNRDKEIAELLRK--ADKPVIIAANKAENIKEAKLAKYDFYELGFSEICLVSAQHGQ 152
Query: 343 GTGELLDLVCSELKKVEGT---EDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
GTG+LLD V S ++E T ED+++ ++VGRPNVGKSS++N ++GE+R IV
Sbjct: 153 GTGDLLDEVISHFSELETTDYDEDVIK-------FSVVGRPNVGKSSLVNQMLGEERVIV 205
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S I+GTTRDAIDT F + Q++ +IDTAG+R++ + E SV RA RA+ RSD
Sbjct: 206 SDIAGTTRDAIDTPFRSAD-QEYVIIDTAGMRRKGKVDYG---VEKFSVIRALRAVDRSD 261
Query: 460 VVALVIEAMACITEQ 474
V +VI+A +T Q
Sbjct: 262 VALIVIDAQEGVTNQ 276
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 59/246 (23%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ ++VGRPNVGKS+L N+++G R IV D G TRD + + E++++DT G+
Sbjct: 179 KFSVVGRPNVGKSSLVNQMLGEERVIVSDIAGTTRDAIDTPFRSADQEYVIIDTAGMRRK 238
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K G+E + +A A++ S V + ++D Q
Sbjct: 239 GK------------VDYGVEKFSVI---------------RALRAVDRSDVALIVIDAQE 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSPLP- 335
G+T D+ IA + + K ++L VNK + K + + L ++P+
Sbjct: 272 GVTNQDKRIAGYAHEE--GKAVVLVVNKWDLIEKDNQTMDRYIEEIRYQVKFLNYAPITF 329
Query: 336 ISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGED 395
+SA++G +LDLV +K E E R+ K ++LN ++ E
Sbjct: 330 VSALTGQRVLRILDLVDYVVK---------ENEKRV------------KRNMLNDVINEA 368
Query: 396 RTIVSP 401
IV P
Sbjct: 369 VEIVQP 374
>gi|238855193|ref|ZP_04645512.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 269-3]
gi|260664556|ref|ZP_05865408.1| ribosome-associated GTPase EngA [Lactobacillus jensenii SJ-7A-US]
gi|313471978|ref|ZP_07812470.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 1153]
gi|238832085|gb|EEQ24403.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 269-3]
gi|239529090|gb|EEQ68091.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 1153]
gi|260561621|gb|EEX27593.1| ribosome-associated GTPase EngA [Lactobacillus jensenii SJ-7A-US]
Length = 436
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 183/313 (58%), Gaps = 42/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVG+PNVGKS LFNR++ AIV D PGVTRDR Y ++ W HEF ++DTGG
Sbjct: 3 LPTVAIVGQPNVGKSTLFNRIINERLAIVEDRPGVTRDRNYAKASWLGHEFNIIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I EG R+ I QA A+EE+ VI+ +
Sbjct: 61 ------------------ITWEG----------GRIEDEIRAQADIAMEEADVIVMITSV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
LT DE IA L ++ K ++LAVNK ++P + + +F+SLG P+PIS+ G
Sbjct: 93 ALHLTDLDERIARILYRS--SKPVLLAVNKADNPEQR-ADIYDFYSLGLGDPIPISSTHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + T+D E+ I A +++GRPNVGKSSI+NA++G+ R IV+
Sbjct: 150 TGIGDLLDAIVENFPPEADTKD----EDEI-AFSVIGRPNVGKSSIINAMLGQKRVIVAN 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
GTTRDA+DT F +G KFR+IDTAGIR+R + TE SV RA AI+RSDVV
Sbjct: 205 EEGTTRDAVDTPFVAEDGTKFRMIDTAGIRRRGKVYEK---TEKYSVLRAQAAIQRSDVV 261
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 262 CLVLDASTGIREQ 274
>gi|184155357|ref|YP_001843697.1| GTP-binding protein EngA [Lactobacillus fermentum IFO 3956]
gi|238692974|sp|B2GC35.1|DER_LACF3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|183226701|dbj|BAG27217.1| GTP-binding protein [Lactobacillus fermentum IFO 3956]
Length = 437
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/311 (42%), Positives = 191/311 (61%), Gaps = 42/311 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G AIV D PGVTRDR+Y W F ++DTGG
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGERIAIVEDTPGVTRDRLYAHGEWLGKNFSMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I M PL T+ I +QA AIEE+ VII +V+ +
Sbjct: 61 -----------------IEMSDQPLLTQ----------IRQQAEIAIEEADVIIMVVNVE 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K ++LAVNK ++P + + V +F+ LG P P+S++ G
Sbjct: 94 NGVTDADEQVAQILYRS--NKPVVLAVNKVDNPERR-LDVYDFYRLGLGEPYPVSSVHGV 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + +D EE++RI + +GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDMLDAVIENFAE----KDAEEEDDRI-RFSFIGRPNVGKSSLVNAILGENRVIVSDM 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAI+T+FT +G++F ++DTAGI+K+ + + TE ++ R+ RAI SDVV
Sbjct: 206 AGTTRDAINTQFTAKDGREFTMVDTAGIKKKGKLYEN---TERYALMRSMRAIDDSDVVL 262
Query: 463 LVIEAMACITE 473
+V+ A I E
Sbjct: 263 VVLNAEEGIRE 273
>gi|345857524|ref|ZP_08809958.1| small GTP-binding domain protein [Desulfosporosinus sp. OT]
gi|344329352|gb|EGW40696.1| small GTP-binding domain protein [Desulfosporosinus sp. OT]
Length = 443
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 191/312 (61%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ GG AIV + PGVTRDR+Y + W +F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRITGGLVAIVENMPGVTRDRLYRDAEWLGRKFALIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
EG P+A S + RQA A+EE+ V+IF+VD Q
Sbjct: 62 ----------------EFKDEGTPIA----------SQMRRQAEIAMEEADVVIFVVDSQ 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
T+ DE IA LR++ K +ILA NK E K Q+ +F SLG +PISA+ G
Sbjct: 96 ISPTSDDELIARTLRRS--GKPVILAANKVEDFEKVEGQLYDFLSLGLGEAIPISAVHGM 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
TG+LLD+V L E E+ E + + I+++GRPNVGKSS++N ++G++R IVS I
Sbjct: 154 NTGDLLDMVIWNLP--ENNEE--EYDPDVIRISVIGRPNVGKSSLVNTMLGKNRVIVSNI 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F EG+ + LIDTAG+R++A I TE SV R+ RA+ RSD++
Sbjct: 210 PGTTRDAIDTPFEH-EGKHYILIDTAGMRRKARI---DELTEQYSVVRSLRAVDRSDMIL 265
Query: 463 LVIEAMACITEQ 474
++I+A+ +TEQ
Sbjct: 266 MLIDAVDGVTEQ 277
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
R++++GRPNVGKS+L N ++G NR IV + PG TRD + F EHE ++L+DT G+
Sbjct: 180 RISVIGRPNVGKSSLVNTMLGKNRVIVSNIPGTTRDAI-DTPF--EHEGKHYILIDTAGM 236
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
++ I T + +V R + A++ S +I+ L+D
Sbjct: 237 RRKAR-------------------IDELTEQYSVVR--------SLRAVDRSDMILMLID 269
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP 333
G+T D++IA + + K IIL VNK + K ++ F + ++P
Sbjct: 270 AVDGVTEQDKKIAGYAHE--AGKAIILIVNKWDLVEKDEKTINVFEKTIREELSFMQYAP 327
Query: 334 -LPISAISGTGTGELLDLV 351
+ ISA +G ++L+LV
Sbjct: 328 TMFISAKTGQRVNKILELV 346
>gi|379727434|ref|YP_005319619.1| GTP-binding protein EngA [Melissococcus plutonius DAT561]
gi|376318337|dbj|BAL62124.1| GTP-binding protein EngA [Melissococcus plutonius DAT561]
Length = 436
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 184/312 (58%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W F ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDVPGVTRDRIYATGEWLGQAFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
DL I I++QA AIEE+ VI+F+ +
Sbjct: 62 ----------DLGNEPFI------------------EQIKQQAEIAIEEADVILFITSIR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE +A L ++ +K +ILAVNK ++P +V EF+SLG P+PIS G
Sbjct: 94 EGITDADELVAKILYRS--NKPVILAVNKADNPELR-SEVYEFYSLGLGDPIPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD + + E ED + +++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GIGDMLDEAINYFSQEEIEEDEDIIK-----FSLIGRPNVGKSSLINAILGEERVIVSEI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT FT P GQKF +IDTAG+RKR + + TE SV RA RAI RSD+V
Sbjct: 206 EGTTRDAIDTYFTSPNGQKFLMIDTAGMRKRGKVYEN---TEKYSVMRAMRAIERSDIVL 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 MVLNAQEGIREQ 274
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 32/164 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R IV + G TRD + Y S G+ +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIVSEIEGTTRDAIDTYFTSPNGQ-KFLMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AIE S +++ +++
Sbjct: 235 KRGKVYEN-------------------TEKYSVMR--------AMRAIERSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
Q G+ D+ +A + + + II+ VNK ++ K + EF
Sbjct: 268 QEGIREQDKRVAGYAHE--AGRGIIILVNKWDAVEKETNTLHEF 309
>gi|417643233|ref|ZP_12293293.1| ribosome biogenesis GTPase Der [Staphylococcus warneri VCU121]
gi|445059618|ref|YP_007385022.1| GTP-binding protein Der [Staphylococcus warneri SG1]
gi|330686012|gb|EGG97635.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU121]
gi|443425675|gb|AGC90578.1| GTP-binding protein Der [Staphylococcus warneri SG1]
Length = 436
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVG+PNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AIEE+ VI+F+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIEEADVIVFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQMLYKS--KKPVVLAVNKVDNVEMR-NDIYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V G E+ ++ ++I+GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVVENF----GEEEEDPYDDDTIRLSIIGRPNVGKSSLVNAILGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAVDTEYS-YDGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAVDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K I++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTVEKDSKTMKKF 309
>gi|414596443|ref|ZP_11446018.1| GTPase Der [Leuconostoc citreum LBAE E16]
gi|390482905|emb|CCF28079.1| GTPase Der [Leuconostoc citreum LBAE E16]
Length = 437
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 184/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G AIV D+PGVTRDR+Y + W +EF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRMAGERIAIVEDKPGVTRDRLYAPAEWLNYEFRMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + E I Q AI+E+ VI+ + G+
Sbjct: 62 ELGDEPFLAE----------------------------IRAQVELAIDEADVIVMVASGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
G+TAADE +A L K DK +ILAVNK ++P + +F+SLG L P+S G
Sbjct: 94 EGVTAADEVVAKMLYKT--DKPVILAVNKVDNPEMR-QDIYDFYSLGLGDLFPVSGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V E E +E++ +I+GRPNVGKSSI+NA++GEDR IVS I
Sbjct: 151 GLGDLLDAVVKHFPD-EAAE---QEDDGAIRFSIIGRPNVGKSSIVNAMLGEDRVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID+ F EG +F ++DTAG+RKR + + TE SV RA +AI S+V+
Sbjct: 207 EGTTRDAIDSRFVTAEGDEFIMVDTAGMRKRGKVYEN---TEKYSVMRALKAIDNSNVIL 263
Query: 463 LVIEAMACITEQ 474
+V++A A I EQ
Sbjct: 264 MVLDAEAGIREQ 275
>gi|156743465|ref|YP_001433594.1| GTP-binding protein EngA [Roseiflexus castenholzii DSM 13941]
gi|156234793|gb|ABU59576.1| small GTP-binding protein [Roseiflexus castenholzii DSM 13941]
Length = 494
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 186/312 (59%), Gaps = 34/312 (10%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL+G RAIV D PG TRDR+YG + W F +VDT G+L
Sbjct: 3 PIVALVGRPNVGKSTLFNRLIGERRAIVEDIPGTTRDRLYGDTEWNGRVFTVVDTAGLL- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ ED T G + +A R + QA AI ES IIF+VD +
Sbjct: 62 -------LDED---DLTPGTPQLEIARR----------VREQAELAIAESDAIIFIVDSR 101
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD +A+ LR+ DK ++LA NK ++ + M EF++L P+P+SA G
Sbjct: 102 EGLTAADAAVAEVLRRT--DKPVVLAANKADNHERA-MNAVEFYALNLGEPIPMSAYHGI 158
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V L VE +EE+ IAIVGRPNVGKSS+LN L+G++R++VS I
Sbjct: 159 GVGDVLDRVTEALPVVE-----MEEDETAVKIAIVGRPNVGKSSLLNRLIGQERSVVSDI 213
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD+IDT G + LIDTAGIR+R I E SV RA RAI R+DV
Sbjct: 214 PGTTRDSIDTPIE-IGGVRALLIDTAGIRRRGKIDRG---LERYSVMRALRAIERADVAL 269
Query: 463 LVIEAMACITEQ 474
L+I+A +T Q
Sbjct: 270 LLIDATEGVTAQ 281
>gi|403238094|ref|ZP_10916680.1| GTP-binding protein Der [Bacillus sp. 10403023]
Length = 436
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 191/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W EF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSSGEWLNQEFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I QA AI+E+ VIIF+ G+
Sbjct: 62 ----------------DIGDE--PFLAQ----------IRHQAEIAIDEADVIIFMTSGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ADEE+A L ++ ++LAVNK ++P + +F++LGF P+PIS G
Sbjct: 94 EGVTSADEEVAKILYRSKTP--VVLAVNKVDNPDMR-ADIYDFYALGFGEPIPISGSHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K G E+ E+ + +++GRPNVGKSS++N+L+GE+R IVS I
Sbjct: 151 GLGDLLDEVIKHFPK-GGDEEYDED---VIKFSLIGRPNVGKSSLVNSLLGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT++T +G+++ +IDTAG+RK+ + S TE SV RA +AI RSDVV
Sbjct: 207 AGTTRDAIDTKYT-VDGKEYVIIDTAGMRKKGKVYES---TEKYSVLRALKAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIIEQ 274
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N L+G R IV D G TRD + + E++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSLVNSLLGEERVIVSDIAGTTRDAIDTKYTVDGKEYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ +++ +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSDVVLVVLNAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D++IA + + + I++ VNK ++ K + EF
Sbjct: 270 GIIEQDKKIAGYAHE--AGRAIVIVVNKWDAIEKDEKTMKEF 309
>gi|414154804|ref|ZP_11411121.1| GTPase involved in ribosome synthesis and maintenance
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411453635|emb|CCO09025.1| GTPase involved in ribosome synthesis and maintenance
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 438
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/316 (45%), Positives = 185/316 (58%), Gaps = 51/316 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+VG AIV D PGVTRDR+Y + W EF LVDTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIVGARIAIVEDMPGVTRDRLYQDAEWRGQEFTLVDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ ED+ + S I +QA AI+E+ ++F+VD +
Sbjct: 62 ------DFAEDV----------------------ITSQIRKQAELAIKEADAVLFVVDAR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
G+TA DEE+A LRK DK ++L NK E K + EF+ LG P+P+SA G
Sbjct: 94 EGVTALDEEVARSLRKT--DKPVLLVANKVEQFDK--IPYYEFYQLGLGEPIPVSAAEGL 149
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPA----IAIVGRPNVGKSSILNALVGEDRTI 398
TG+LLD + + L +EE+ P IA++GRPNVGKSS++NA++GE+R I
Sbjct: 150 NTGDLLDELVALLPP--------QEEDPYPPDTVRIAVIGRPNVGKSSLVNAILGEERVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VS I GTTRDAIDT F G+ + +IDTAG+R+R I E SV RA RAI R
Sbjct: 202 VSNIPGTTRDAIDTPFER-NGKNYVIIDTAGMRRRNRIDLPA---ERYSVVRALRAIDRC 257
Query: 459 DVVALVIEAMACITEQ 474
DVV +VI+A + EQ
Sbjct: 258 DVVLMVIDATEGVAEQ 273
>gi|170017042|ref|YP_001727961.1| GTP-binding protein EngA [Leuconostoc citreum KM20]
gi|421876350|ref|ZP_16307908.1| GTPase Der [Leuconostoc citreum LBAE C10]
gi|421878100|ref|ZP_16309583.1| GTPase Der [Leuconostoc citreum LBAE C11]
gi|238688961|sp|B1MYB5.1|DER_LEUCK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|169803899|gb|ACA82517.1| GTP-binding protein engA [Leuconostoc citreum KM20]
gi|372557871|emb|CCF24028.1| GTPase Der [Leuconostoc citreum LBAE C10]
gi|390447975|emb|CCF25703.1| GTPase Der [Leuconostoc citreum LBAE C11]
Length = 437
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 184/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G AIV D+PGVTRDR+Y + W +EF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRMAGERIAIVEDKPGVTRDRLYAPAEWLNYEFRMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + E I Q AI+E+ VI+ + G+
Sbjct: 62 ELGDEPFLAE----------------------------IRAQVELAIDEADVIVMVASGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
G+TAADE +A L K DK +ILAVNK ++P + +F+SLG L P+S G
Sbjct: 94 EGVTAADEVVAKMLYKT--DKPVILAVNKVDNPEMR-QDIYDFYSLGLGDLFPVSGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V E E +E++ +I+GRPNVGKSSI+NA++GEDR IVS I
Sbjct: 151 GLGDLLDAVVKHFPD-EAAE---QEDDGAIRFSIIGRPNVGKSSIVNAMLGEDRVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID+ F EG +F ++DTAG+RKR + + TE SV RA +AI S+V+
Sbjct: 207 EGTTRDAIDSRFVTAEGDEFIMVDTAGMRKRGKVYEN---TEKYSVMRALKAIDNSNVIL 263
Query: 463 LVIEAMACITEQ 474
+V++A A I EQ
Sbjct: 264 MVLDAEAGIREQ 275
>gi|374851718|dbj|BAL54670.1| small GTP-binding protein, partial [uncultured Chloroflexi
bacterium]
Length = 401
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 146/319 (45%), Positives = 185/319 (57%), Gaps = 38/319 (11%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNR VG AIV + PG TRDR++G W F +VDTGG+
Sbjct: 6 PLVALVGRPNVGKSTLFNRFVGERLAIVDETPGTTRDRIFGSCEWNGQIFDVVDTGGIDP 65
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ PL+T A I RQA +E + +++FL DGQ
Sbjct: 66 QHGGRS-----------------PLST---GSAEFIEEIRRQALLGVENADIVLFLTDGQ 105
Query: 284 AGLTAADEEIADWLRKNY-------MDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLP 335
G T AD EIA LR++ + I+L VNKCES + + F+ LG P
Sbjct: 106 EGPTPADHEIARLLRRHQKKTAAGKLSPPILLVVNKCESEAQRAASAA-FYELGLGEPHA 164
Query: 336 ISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGED 395
ISA+ GTGTG+LLD + L ++E +E EE+ + IAIVG+PNVGKSS+LN L+GE+
Sbjct: 165 ISALHGTGTGDLLDRIVELLPRIEESE----EEDSV-KIAIVGKPNVGKSSLLNRLLGEE 219
Query: 396 RTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAI 455
R IVSPI GTTRDAIDT +G LIDTAGIR+R I E SV R+ +AI
Sbjct: 220 RVIVSPIPGTTRDAIDTHLEY-QGVPITLIDTAGIRRRGRIEPG---VETYSVLRSLQAI 275
Query: 456 RRSDVVALVIEAMACITEQ 474
R+DVV LVI+A + IT Q
Sbjct: 276 DRADVVLLVIDATSGITAQ 294
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 369 NRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPE--GQKFRLID 426
R P +A+VGRPNVGKS++ N VGE IV GTTRD I F E GQ F ++D
Sbjct: 3 TRKPLVALVGRPNVGKSTLFNRFVGERLAIVDETPGTTRDRI---FGSCEWNGQIFDVVD 59
Query: 427 TAGIRKRAAIASSGSTTEALSV----NRAFRAIRRSDVVALVIEA 467
T GI + S ST A + +A + +D+V + +
Sbjct: 60 TGGIDPQHGGRSPLSTGSAEFIEEIRRQALLGVENADIVLFLTDG 104
>gi|260583467|ref|ZP_05851215.1| ribosome-associated GTPase EngA [Granulicatella elegans ATCC
700633]
gi|260158093|gb|EEW93161.1| ribosome-associated GTPase EngA [Granulicatella elegans ATCC
700633]
Length = 437
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/314 (43%), Positives = 185/314 (58%), Gaps = 45/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D GVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRVVGERISIVEDIAGVTRDRIYSEGEWLGHQFHIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+I ++ P S I QA A+EE+ VIIFL +
Sbjct: 62 ------DITDE------------PFM----------SNIRMQAEIAMEEADVIIFLTSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAIS 340
G+T+ DE IA L + +K ++LAVNK ++P R I +F++LGF P PIS
Sbjct: 94 EGVTSTDEHIAKMLYRT--NKPVLLAVNKVDNPELRSDIF---DFYALGFGEPFPISGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G+LLD + + ED + + + +GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGLGDLLDAAVKAFPEHDDQED----DTDVIRFSFIGRPNVGKSSLVNAMLGEERVIVS 204
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
++GTTRDAIDT FT EG F++IDTAGIRK+ + S TE SV RA RAI RSD+
Sbjct: 205 NVAGTTRDAIDTSFTDEEGTIFKMIDTAGIRKKGRVFES---TEKYSVLRALRAIERSDI 261
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 262 VCVVLNAEEGIQEQ 275
>gi|226324619|ref|ZP_03800137.1| hypothetical protein COPCOM_02403 [Coprococcus comes ATCC 27758]
gi|225207067|gb|EEG89421.1| ribosome biogenesis GTPase Der [Coprococcus comes ATCC 27758]
Length = 442
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 190/312 (60%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G AIV D PGVTRDR+Y W + EF L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGEKIAIVKDTPGVTRDRIYAEVNWLDKEFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ +R+ +++M QA AI+ + VI+F+ D +
Sbjct: 62 ----EPD-------------------SRDVILSQM----REQAQIAIDTADVILFMTDVK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR+++ K +IL VNK ++ K + V EF++LG P+PISA
Sbjct: 95 QGLVDSDSKVADMLRRSH--KPVILVVNKVDNFNKMMPDVYEFYNLGIGDPVPISASERI 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + + G E EE++R P +AIVG+PNVGKSSI+N L+G+DR IVS I
Sbjct: 153 GIGDMLDKVLAYFPEGAGQE---EEDDR-PRVAIVGKPNVGKSSIINRLIGKDRVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE G+++ IDTAG+R++ I E S+ R A+ R+DVV
Sbjct: 209 AGTTRDAIDTEVVH-NGKEYVFIDTAGLRRKNKIKEE---LERYSIIRTVTAVERADVVL 264
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 265 VVIDAAEGVTEQ 276
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PRVAIVG+PNVGKS++ NRL+G +R IV D G TRD + E++ +DT G+
Sbjct: 178 PRVAIVGKPNVGKSSIINRLIGKDRVIVSDIAGTTRDAIDTEVVHNGKEYVFIDTAGL-- 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E+L + I + A+E + V++ ++D
Sbjct: 236 --RRKNKIKEELERYSII-----------------------RTVTAVERADVVLVVIDAA 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----L 334
G+T D +IA + K +I+ VNK ++ K E+ L F P +
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGVIIVVNKWDAIEKNDKTTREYEHQIRMVLSFLPYAEIM 328
Query: 335 PISAISGTGTGELLDLV 351
+SA++G +L D++
Sbjct: 329 YVSALTGQRLPKLFDMI 345
>gi|239636852|ref|ZP_04677851.1| ribosome-associated GTPase EngA [Staphylococcus warneri L37603]
gi|239597526|gb|EEQ80024.1| ribosome-associated GTPase EngA [Staphylococcus warneri L37603]
Length = 436
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVG+PNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AIEE+ VI+F+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIEEADVIVFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQMLYKS--KKPVVLAVNKVDNVEMR-NDIYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V G E+ ++ ++I+GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAVVENF----GEEEEDPYDDDTIRLSIIGRPNVGKSSLVNAILGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DTE++ +GQ + LIDTAG+RK+ + S TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAVDTEYSF-DGQDYVLIDTAGMRKKGKVYES---TEKYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEQGIIEQ 274
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 32/189 (16%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAVDTEYSFDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLPISAISG 341
G+ D+ +A + + K I++ VNK E K + + +E + F L + I+
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTVEKDSKTMKKFTEDVRIEFQFLDYAQIAF 327
Query: 342 TGTGELLDL 350
E L L
Sbjct: 328 VSAKEQLRL 336
>gi|365904011|ref|ZP_09441770.1| GTP-binding protein Der [Lactobacillus versmoldensis KCTC 3814]
Length = 437
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/314 (44%), Positives = 190/314 (60%), Gaps = 43/314 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P VA+VGRPNVGKS +FNR++ +IV D PGVTRDR+Y R+ W EF L+DTGG
Sbjct: 3 VPVVALVGRPNVGKSTIFNRIINERLSIVEDTPGVTRDRIYARASWLGKEFRLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I M PL + I+ QA AI+E+ VI+F+V+G
Sbjct: 61 ------------------IDMSDEPLTVQ----------IKNQAEIAIDEADVIVFIVNG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q +T DE++A L + K IILAVNK ++P + + +F++LGF P P+S G
Sbjct: 93 QNSVTKEDEDVAKILYRT--KKPIILAVNKADNPEQR-ENIYDFYALGFGDPNPVSGSQG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD E+ K TED ++++ I + +GRPNVGKSS++NA++G++R IVS
Sbjct: 150 TGIGDLLD----EIVKAFPTEDKHDQDDSI-KFSFIGRPNVGKSSLVNAILGDERVIVSN 204
Query: 402 ISGTTRDAIDTEFTGPEGQK-FRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT++ +K F +IDTAGIRKR + + TE SV RA AI +SDV
Sbjct: 205 IQGTTRDAIDTKYFDERLEKDFTMIDTAGIRKRGKVYEN---TEKYSVLRALSAIDKSDV 261
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 262 VCVVLNAEEGIREQ 275
>gi|325265091|ref|ZP_08131818.1| ribosome-associated GTPase EngA [Clostridium sp. D5]
gi|324029781|gb|EGB91069.1| ribosome-associated GTPase EngA [Clostridium sp. D5]
Length = 442
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 192/312 (61%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + EF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGEMISIVKDTPGVTRDRIYADVSWLDREFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ +R+ +++M QA AI+ + VIIF+ D +
Sbjct: 62 ----EPD-------------------SRDVILSQM----REQAQIAIDTADVIIFITDVK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR++ K +IL VNK ++ K + V EF++LG P+PISA S
Sbjct: 95 QGLVDSDSKVADMLRRS--GKPVILVVNKVDNFDKFMPDVYEFYNLGIGDPVPISAASRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + K G E EE++R P IAIVG+PNVGKSSI+N L+GE+R IVS +
Sbjct: 153 GLGDMLDEVTAHFPKSAGEE---EEDDR-PRIAIVGKPNVGKSSIINKLLGENRVIVSDV 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE +G+++ IDTAG+R+++ I E S+ R A+ R+DVV
Sbjct: 209 AGTTRDAIDTEIL-HDGKEYIFIDTAGLRRKSRIKEE---LERYSIIRTVTAVERADVVL 264
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 265 IVIDAEEGVTEQ 276
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 40/198 (20%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVG+PNVGKS++ N+L+G NR IV D G TRD + E++ +DT G+
Sbjct: 178 PRIAIVGKPNVGKSSIINKLLGENRVIVSDVAGTTRDAIDTEILHDGKEYIFIDTAGL-- 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E+L + I + A+E + V++ ++D +
Sbjct: 236 --RRKSRIKEELERYSII-----------------------RTVTAVERADVVLIVIDAE 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG----------IMQVSEFWSLGFSP 333
G+T D +IA + K II+ VNK ++ K I QV + S
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGIIIVVNKWDAVEKNDKTMREYDNKIRQVLSYLSYA-EI 327
Query: 334 LPISAISGTGTGELLDLV 351
+ +SA++G +L +++
Sbjct: 328 MYVSAVTGQRLNKLYEMI 345
>gi|374853981|dbj|BAL56875.1| small GTP-binding protein [uncultured Chloroflexi bacterium]
Length = 457
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 146/319 (45%), Positives = 185/319 (57%), Gaps = 38/319 (11%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNR VG AIV + PG TRDR++G W F +VDTGG+
Sbjct: 6 PLVALVGRPNVGKSTLFNRFVGERLAIVDETPGTTRDRIFGSCEWNGQIFDVVDTGGIDP 65
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ PL+T A I RQA +E + +++FL DGQ
Sbjct: 66 QHGGRS-----------------PLST---GSAEFIEEIRRQALLGVENADIVLFLTDGQ 105
Query: 284 AGLTAADEEIADWLRKNY-------MDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLP 335
G T AD EIA LR++ + I+L VNKCES + + F+ LG P
Sbjct: 106 EGPTPADHEIARLLRRHQKKTAAGKLSPPILLVVNKCESEAQRAASAA-FYELGLGEPHA 164
Query: 336 ISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGED 395
ISA+ GTGTG+LLD + L ++E +E EE+ + IAIVG+PNVGKSS+LN L+GE+
Sbjct: 165 ISALHGTGTGDLLDRIVELLPRIEESE----EEDSV-KIAIVGKPNVGKSSLLNRLLGEE 219
Query: 396 RTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAI 455
R IVSPI GTTRDAIDT +G LIDTAGIR+R I E SV R+ +AI
Sbjct: 220 RVIVSPIPGTTRDAIDTHLEY-QGVPITLIDTAGIRRRGRIEPG---VETYSVLRSLQAI 275
Query: 456 RRSDVVALVIEAMACITEQ 474
R+DVV LVI+A + IT Q
Sbjct: 276 DRADVVLLVIDATSGITAQ 294
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 369 NRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPE--GQKFRLID 426
R P +A+VGRPNVGKS++ N VGE IV GTTRD I F E GQ F ++D
Sbjct: 3 TRKPLVALVGRPNVGKSTLFNRFVGERLAIVDETPGTTRDRI---FGSCEWNGQIFDVVD 59
Query: 427 TAGIRKRAAIASSGSTTEALSV----NRAFRAIRRSDVVALVIEA 467
T GI + S ST A + +A + +D+V + +
Sbjct: 60 TGGIDPQHGGRSPLSTGSAEFIEEIRRQALLGVENADIVLFLTDG 104
>gi|334134171|ref|ZP_08507684.1| ribosome biogenesis GTPase Der [Paenibacillus sp. HGF7]
gi|333608299|gb|EGL19600.1| ribosome biogenesis GTPase Der [Paenibacillus sp. HGF7]
Length = 440
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 193/312 (61%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR++G AIV D+PGVTRDR+YG W + EF ++DTGG+
Sbjct: 4 PILAIVGRPNVGKSTIFNRIIGDRLAIVEDKPGVTRDRLYGIGEWLDREFSVIDTGGIEV 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ Q IM+ + + QA AIEE+ VIIF+VD +
Sbjct: 64 EGEDQ--IMKSVRV---------------------------QAELAIEEADVIIFMVDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+T+AD+E+A L ++ K ++LAVNK ++ ++ ++ EF+SLGF P+ IS G
Sbjct: 95 AGVTSADQEVAQLLFRS--RKPVVLAVNKVDNIQRQ-DEIYEFYSLGFGDPIGISGAHGI 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++L+ + E+ EE + +A++GRPNVGKSS++NA++GEDR IVS
Sbjct: 152 GIGDMLEAAAAHFPD-HPDEEYGEE---VIKVALIGRPNVGKSSLVNAILGEDRVIVSDQ 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F + QK+ +IDTAG+RKR + + TE SV RA +AI R+DVV
Sbjct: 208 AGTTRDAIDTPFE-LDDQKYVIIDTAGMRKRGKVYEN---TEKYSVMRAMKAIERADVVL 263
Query: 463 LVIEAMACITEQ 474
+VI I EQ
Sbjct: 264 VVINGEEGIIEQ 275
>gi|37522779|ref|NP_926156.1| GTP-binding protein EngA [Gloeobacter violaceus PCC 7421]
gi|41017005|sp|Q7NGF9.1|DER_GLOVI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|35213781|dbj|BAC91151.1| gll3210 [Gloeobacter violaceus PCC 7421]
Length = 455
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/317 (44%), Positives = 192/317 (60%), Gaps = 46/317 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL GG+ AIV D+PGVTRDR+Y + W + F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLLNRLAGGSEAIVYDQPGVTRDRLYLPAEWCGYRFEVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ ED + +PL I Q A+ E+ ++F+VDG
Sbjct: 62 --------VFEDSEVF-------LPL-------------IREQVEIALAEAAAVLFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+T D E+ADWLR +++ NK E P + +EF++LG P +SAI G
Sbjct: 94 QQGITGGDREVADWLRGR--KPPVLIVANKLEEPSTALSLAAEFYALGLGEPYAVSAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPA--IAIVGRPNVGKSSILNALVGED--RT 397
+GTG+LLD + + L K + EE +P ++IVGRPNVGKSS+LNALVG + R+
Sbjct: 152 SGTGDLLDALVAVLPKDQ------PEEQELPELRVSIVGRPNVGKSSLLNALVGGEHPRS 205
Query: 398 IVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRR 457
+VS ++GTTRDAIDT E +++RLIDTAGIR+++ + EA V RA RAIRR
Sbjct: 206 MVSEVAGTTRDAIDTLVEHGE-RRYRLIDTAGIRRKSRVDYG---PEAFGVTRAIRAIRR 261
Query: 458 SDVVALVIEAMACITEQ 474
+DVV LV++A I +Q
Sbjct: 262 ADVVVLVVDATEGIHDQ 278
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRD--AIDTEFTGPEGQKFRLIDT 427
++P +AI+GRPNVGKS++LN L G IV G TRD + E+ G +F ++DT
Sbjct: 2 QLPIVAIIGRPNVGKSTLLNRLAGGSEAIVYDQPGVTRDRLYLPAEWC---GYRFEVVDT 58
Query: 428 AGI 430
G+
Sbjct: 59 GGL 61
>gi|164686350|ref|ZP_02210380.1| hypothetical protein CLOBAR_02788 [Clostridium bartlettii DSM
16795]
gi|164601952|gb|EDQ95417.1| ribosome biogenesis GTPase Der [Clostridium bartlettii DSM 16795]
Length = 450
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 187/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN+L G +IV D PGVTRDR++ W F L+DTGG+
Sbjct: 14 PIVAVVGRPNVGKSTLFNKLAGKRISIVEDTPGVTRDRIFAEVEWLNKYFTLIDTGGI-- 71
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K +++ S + QA A++ + +IIF+VDG+
Sbjct: 72 -EKDNGDVI--------------------------LSQMRNQAMLAVDMAHIIIFVVDGK 104
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
AGLTAAD+E+A LRK +K ++LAVNK +S + + + +F+ LG +P IS+ +
Sbjct: 105 AGLTAADKEVAQILRKT--NKPVLLAVNKIDSINQ-MDNIYDFYELGLGNPYAISSANSM 161
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K TE + I +AI G+PN GKSSILN ++GE+R IVSPI
Sbjct: 162 GLGDLLDEVVENFPKGLNTE----YDEDIIRVAITGKPNAGKSSILNNILGENRVIVSPI 217
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F +GQ++ LIDTAGIR+++ + E SV R+ A+ R+DVV
Sbjct: 218 AGTTRDAIDTYFE-KDGQQYLLIDTAGIRRKSKVYER---VEKFSVIRSMSAVERADVVL 273
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 274 IVIDATEGVTEQ 285
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 368 ENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDT 427
+NR P +A+VGRPNVGKS++ N L G+ +IV G TRD I E + F LIDT
Sbjct: 11 DNR-PIVAVVGRPNVGKSTLFNKLAGKRISIVEDTPGVTRDRIFAEVEWL-NKYFTLIDT 68
Query: 428 AGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACIT 472
GI K +G + N+A A+ + ++ V++ A +T
Sbjct: 69 GGIEK-----DNGDVILSQMRNQAMLAVDMAHIIIFVVDGKAGLT 108
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 41/205 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVAI G+PN GKS++ N ++G NR IV G TRD + +++L+DT G+
Sbjct: 188 RVAITGKPNAGKSSILNNILGENRVIVSPIAGTTRDAIDTYFEKDGQQYLLIDTAGIRRK 247
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + E ++ ++ +A+E + V++ ++D
Sbjct: 248 SKVYERV-EKFSVI--------------------------RSMSAVERADVVLIVIDATE 280
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVS-----EFWSLGFSP-LP 335
G+T D ++A K I VNK E K + + +F + ++P L
Sbjct: 281 GVTEQDTKVAGIAHDE--GKGCIFIVNKWDLIEKDNKTLGNYTKEIREKFPFMMYAPVLF 338
Query: 336 ISAISGTGTGELL---DLVCSELKK 357
+SA++ ++L D V SE K
Sbjct: 339 VSALTNQRMNKILETVDYVASEHAK 363
>gi|238916971|ref|YP_002930488.1| GTP-binding protein EngA [Eubacterium eligens ATCC 27750]
gi|259645875|sp|C4Z0C8.1|DER_EUBE2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238872331|gb|ACR72041.1| GTP-binding protein [Eubacterium eligens ATCC 27750]
Length = 441
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 189/312 (60%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN L G +IV D PGVTRDR+Y W H F L+DTGG+
Sbjct: 4 PIVAVVGRPNVGKSTLFNSLCGQQISIVKDTPGVTRDRIYAEVSWLNHNFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ T + +++M QA AIE + VIIF+ D +
Sbjct: 62 ----EPD-------------------TGDIILSQM----REQAEIAIETADVIIFMTDVK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR+++ K +IL VNK +S K + V EF++LG P PISA++
Sbjct: 95 QGLVDSDSKVADMLRRSH--KPVILVVNKVDSFEKMMPDVYEFYNLGIGEPFPISAVNKL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G GE+LD V S EG+ D +E++R P +AI+G+PNVGKSSI+N LVG++R IVS I
Sbjct: 153 GFGEVLDEVVSHFP--EGS-DTDKEDDR-PKVAIIGKPNVGKSSIINKLVGKNRVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT G+++ IDTAG+R+++ I E S+ R A+ R+D+
Sbjct: 209 AGTTRDAIDTAIK-YNGKEYVFIDTAGLRRKSKIKED---LERFSIIRTVAAVERADIAI 264
Query: 463 LVIEAMACITEQ 474
LVI+A +TEQ
Sbjct: 265 LVIDATEGVTEQ 276
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 94/197 (47%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P+VAI+G+PNVGKS++ N+LVG NR IV D G TRD + + E++ +DT G+
Sbjct: 178 PKVAIIGKPNVGKSSIINKLVGKNRVIVSDIAGTTRDAIDTAIKYNGKEYVFIDTAGLRR 237
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK I EDL + I + AA+E + + I ++D
Sbjct: 238 KSK----IKEDLERFSII-----------------------RTVAAVERADIAILVIDAT 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSP----L 334
G+T D +IA + K II+AVNK + K + EF +L F +
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGIIIAVNKWDDIEKNDKTIYEFTNKIKDTLAFMSYAEII 328
Query: 335 PISAISGTGTGELLDLV 351
+SA +G ++ +LV
Sbjct: 329 FVSAKTGQRLNKIYELV 345
>gi|358066995|ref|ZP_09153481.1| GTP-binding protein engA [Johnsonella ignava ATCC 51276]
gi|356694844|gb|EHI56499.1| GTP-binding protein engA [Johnsonella ignava ATCC 51276]
Length = 441
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 189/312 (60%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA++GRPNVGKS LFN + G + +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 4 PVVAVIGRPNVGKSTLFNVIAGDSISIVKDTPGVTRDRIYADCNWLDMNFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P +T I + S + +QA AI+ + VIIF+ D +
Sbjct: 62 ----EPE-------STDI----------------ILSQMRQQAQIAIDNADVIIFMTDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD ++AD LR++ K ++LAVNK +S +K V EF+++G P+PISA S
Sbjct: 95 QGLVDADLKVADMLRRS--GKTVVLAVNKVDSIQKFGNDVYEFYNMGIGDPMPISAASRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD VCS K ++D+ ++ P IAI+G+PNVGKSSI+N L+G R IVS I
Sbjct: 153 GIGDLLDAVCSHFDKASASQDIQDDR---PKIAIIGKPNVGKSSIINKLIGTSRVIVSDI 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT + +++ IDTAGIR+++ I E S+ RA A+ R+DV
Sbjct: 210 AGTTRDAIDTVIVHNK-KEYVFIDTAGIRRKSKIKEE---LERYSIIRAVTAVERADVSI 265
Query: 463 LVIEAMACITEQ 474
LVI+A+ ++EQ
Sbjct: 266 LVIDALEGVSEQ 277
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P++AI+G+PNVGKS++ N+L+G +R IV D G TRD + + E++ +DT G+
Sbjct: 179 PKIAIIGKPNVGKSSIINKLIGTSRVIVSDIAGTTRDAIDTVIVHNKKEYVFIDTAGIRR 238
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK I E+L + I +A A+E + V I ++D
Sbjct: 239 KSK----IKEELERYSII-----------------------RAVTAVERADVSILVIDAL 271
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP----L 334
G++ D +IA K +I+AVNK + K ++E S L F P +
Sbjct: 272 EGVSEQDAKIAGIAHDR--GKGVIVAVNKWDLVTKDNKTMNEHLSNLKRILSFIPYAEYI 329
Query: 335 PISAISGTGTGELLDLV 351
ISA+SG +L DL+
Sbjct: 330 FISAVSGQRLYKLFDLI 346
>gi|451818097|ref|YP_007454298.1| GTP-binding protein EngA [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451784076|gb|AGF55044.1| GTP-binding protein EngA [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 438
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 188/314 (59%), Gaps = 45/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL G +IV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRLAGKRISIVQDTPGVTRDRVYAEAEWLSYNFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P +D+ + + RQA AIE + VI+F+VDG+
Sbjct: 62 ----EPE-RDDIIV----------------------KQMRRQANIAIETADVIVFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A LRK+ K ++L VNK +S ++ EF++LG P+ ISA G
Sbjct: 95 EGLTPADNEVATMLRKS--KKPVVLVVNKVDSLKEE-DNAWEFYNLGIGDPVTISASQGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLV--EEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G++LD K VEG + + EEE+ IA++G+PNVGKSS++N L+GEDR IVS
Sbjct: 152 GLGDMLD------KVVEGFDKSIFEEEEDEYIRIAMIGKPNVGKSSLINKLLGEDRVIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
+ GTTRDAID+ EG KF LIDTAG+R+++ + E SV R + AI R+DV
Sbjct: 206 DVPGTTRDAIDSHLETEEG-KFILIDTAGLRRKSKVKEE---IERYSVVRTYAAIERADV 261
Query: 461 VALVIEAMACITEQ 474
L+I+A ITEQ
Sbjct: 262 CILMIDATEGITEQ 275
>gi|225572013|ref|ZP_03780877.1| hypothetical protein RUMHYD_00307 [Blautia hydrogenotrophica DSM
10507]
gi|225040546|gb|EEG50792.1| ribosome biogenesis GTPase Der [Blautia hydrogenotrophica DSM
10507]
Length = 441
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 190/312 (60%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G N +IV D PGVTRDR+Y W + F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAGENISIVKDTPGVTRDRIYAEVTWLDKSFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ D+ + S + QA AI+ + VI+FLVD +
Sbjct: 62 ----EPD-SNDIIL----------------------SQMREQAQIAIDTADVIVFLVDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ AD ++AD LR++ K ++L VNK +S K +M V EF++LG P+P+SA S
Sbjct: 95 QGMVDADAKVADMLRRS--TKPVVLVVNKVDSFEKFMMDVYEFYNLGIGEPIPVSASSRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD + + G ED EE+ IP IA+VG+PNVGKSS++N LVGE+R IVS I
Sbjct: 153 GLGDMLDEIVKHFPEHAG-ED---EEDEIPKIAVVGKPNVGKSSLINKLVGEERVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT+ +G+++ IDTAG+R++ I E SV R A+ R++VV
Sbjct: 209 AGTTRDAIDTKVKW-QGREYVFIDTAGLRRKGKIKEE---IERYSVIRTVTAVERANVVV 264
Query: 463 LVIEAMACITEQ 474
++I+ + +TEQ
Sbjct: 265 IMIDGVEGVTEQ 276
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 36/171 (21%)
Query: 155 IGNVPEHL-------LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSF 207
+ + PEH +P++A+VG+PNVGKS+L N+LVG R IV D G TRD + +
Sbjct: 162 VKHFPEHAGEDEEDEIPKIAVVGKPNVGKSSLINKLVGEERVIVSDIAGTTRDAIDTKVK 221
Query: 208 WGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQAT 267
W E++ +DT G+ K + I E ++ T+
Sbjct: 222 WQGREYVFIDTAGLRRKGKIKEEI-ERYSVIRTV-------------------------- 254
Query: 268 AAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
A+E + V++ ++DG G+T D +IA + K +I+AVNK ++ K
Sbjct: 255 TAVERANVVVIMIDGVEGVTEQDAKIAGIAHEK--GKGVIIAVNKWDAVEK 303
>gi|326791376|ref|YP_004309197.1| ribosome-associated GTPase EngA [Clostridium lentocellum DSM 5427]
gi|326542140|gb|ADZ83999.1| ribosome-associated GTPase EngA [Clostridium lentocellum DSM 5427]
Length = 441
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 190/312 (60%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA++GRPNVGKS LFNRL +IV D PGVTRDR+YG W H+F ++DTGG+
Sbjct: 4 PIVAVIGRPNVGKSTLFNRLTKSKTSIVDDTPGVTRDRIYGEVEWLNHKFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ +T I + S + RQA AAIE + VIIFLVD +
Sbjct: 62 ----EPD-------STDIIL----------------SQMRRQAEAAIESADVIIFLVDVK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T AD +A+ LRK++ K ++L VNK + M + EF++LG P+PIS+
Sbjct: 95 TGMTDADTHVANMLRKSH--KPVVLVVNKVDDMVHQTMGMYEFYNLGLGEPIPISSGQAL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G++LD V S + + ++ +AI+G+PNVGKSS++N +VGE+R IVS I
Sbjct: 153 NLGDMLDEVVSYFPDEDAEAEEDDKIR----VAIIGKPNVGKSSLVNKIVGEERVIVSNI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD++DTE T EGQ++ LIDTAGIR+R+ I + E S+ R AI R+DVV
Sbjct: 209 AGTTRDSVDTEVT-IEGQEYVLIDTAGIRRRSKIKEN---IEKYSIIRTIAAIDRADVVL 264
Query: 463 LVIEAMACITEQ 474
++I+A ITEQ
Sbjct: 265 ILIDAEEGITEQ 276
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 38/198 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVAI+G+PNVGKS+L N++VG R IV + G TRD + E++L+DT G+
Sbjct: 179 RVAIIGKPNVGKSSLVNKIVGEERVIVSNIAGTTRDSVDTEVTIEGQEYVLIDTAGIRRR 238
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + NI E +I TI AAI+ + V++ L+D +
Sbjct: 239 SKIKENI-EKYSIIRTI--------------------------AAIDRADVVLILIDAEE 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
G+T D +IA + K I+ VNK ++ K ++ + + ++P +
Sbjct: 272 GITEQDTKIAGMAHE--AGKGCIIVVNKWDAIEKDDKTMNAYLKKITNTLAYMQYAPCMF 329
Query: 336 ISAISGTGTGELLDLVCS 353
ISA++G +L D + +
Sbjct: 330 ISALTGQRIPKLFDTIYA 347
>gi|354558298|ref|ZP_08977554.1| GTP-binding protein engA [Desulfitobacterium metallireducens DSM
15288]
gi|353549023|gb|EHC18467.1| GTP-binding protein engA [Desulfitobacterium metallireducens DSM
15288]
Length = 441
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 185/314 (58%), Gaps = 45/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL GG AIV D PGVTRDR+Y S W +F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRLAGGLVAIVEDRPGVTRDRLYRDSEWLGRKFTIIDTGGI-E 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
Q +I P+ + +QA AIEE+ VI+ +VD Q
Sbjct: 63 FRNEQTSI---------------------------PTQMRKQAEIAIEEADVIVLVVDAQ 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
LT DE IA LR++ K +++A NK ES ++SE + LG P+PISA+ G
Sbjct: 96 LELTPDDEMIAQTLRRSR--KPVVVAANKIESFANA--ELSELYRLGLGEPIPISAVHGM 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEEN--RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G+LLD V + E EEE I IA +GRPNVGKSS++N+L+GE+R IVS
Sbjct: 152 NIGDLLDEVLTHFPSQE------EEEYDPDIIKIAAIGRPNVGKSSLVNSLLGEERVIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
+ GTTRDAIDT F EG+ + LIDTAG+R++ I TE SV+R+ RA+ R DV
Sbjct: 206 NVPGTTRDAIDTAFEH-EGKHYILIDTAGMRRKGRI---DELTERYSVSRSLRAVDRCDV 261
Query: 461 VALVIEAMACITEQ 474
V ++IEA +TEQ
Sbjct: 262 VLMLIEATEGVTEQ 275
>gi|340750091|ref|ZP_08686938.1| GTP-binding protein engA [Fusobacterium mortiferum ATCC 9817]
gi|229419737|gb|EEO34784.1| GTP-binding protein engA [Fusobacterium mortiferum ATCC 9817]
Length = 440
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 191/314 (60%), Gaps = 44/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN LVG AIV D PGVTRDR+Y + W EF++VDTGG+
Sbjct: 3 PIVAIVGRPNVGKSTLFNNLVGDRVAIVDDMPGVTRDRLYRETEWNGTEFVVVDTGGL-- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P D +T I++QA A+ E+ VI+F+VDG+
Sbjct: 61 ----EPR-NNDFMMTK----------------------IKQQAEVAMNEADVILFVVDGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
G+ DEEIA LRK +K IIL VNK ++ + V +FW+LGF L PIS
Sbjct: 94 CGVNPLDEEIAYILRKK--NKPIILCVNKIDNFLEQQDDVYDFWALGFEHLIPISGGHKV 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G++LD+V +KK+ D+ EEE + +AI+G+PN GKSS++N L GE+RTIVS I
Sbjct: 152 NLGDMLDMVTDMIKKI----DIPEEEEDVLKLAIIGKPNAGKSSLVNRLAGEERTIVSDI 207
Query: 403 SGTTRDAIDT--EFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
+GTTRDAIDT EF + +K+ +IDTAGIR+++ + S E SV RA + I+R+DV
Sbjct: 208 AGTTRDAIDTIVEF---DEKKYMIIDTAGIRRKSKVEES---LEYYSVLRAIKTIKRADV 261
Query: 461 VALVIEAMACITEQ 474
L+++ ++EQ
Sbjct: 262 CLLMLDGKEGLSEQ 275
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+G+PN GKS+L NRL G R IV D G TRD + + E ++M++DT G+
Sbjct: 178 KLAIIGKPNAGKSSLVNRLAGEERTIVSDIAGTTRDAIDTIVEFDEKKYMIIDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + E L + + +A I+ + V + ++DG+
Sbjct: 238 SKVE----ESLEYYSVL-----------------------RAIKTIKRADVCLLMLDGKE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE--SPRKGIMQ------VSEFWSLGFSPLP- 335
GL+ D+ IA + K II+ VNK + + M+ +E L ++P+
Sbjct: 271 GLSEQDKRIAGIAAEEL--KPIIVVVNKWDLVDKKSNTMEKMREKLYAELPFLSYAPIEF 328
Query: 336 ISAISGTGTGELLDL 350
+SA++G T +LL++
Sbjct: 329 VSALTGQRTTKLLEI 343
>gi|269118862|ref|YP_003307039.1| small GTP-binding protein [Sebaldella termitidis ATCC 33386]
gi|268612740|gb|ACZ07108.1| small GTP-binding protein [Sebaldella termitidis ATCC 33386]
Length = 440
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 193/312 (61%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L+G +IV D PGVTRDR+Y W EF LVDTGG+
Sbjct: 3 PIVAIVGRPNVGKSTLFNKLIGERLSIVKDVPGVTRDRLYRDVEWSGKEFTLVDTGGL-- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K+Q IM S I+ QA AI+E+ V++FLVDG+
Sbjct: 61 EPKTQDFIM---------------------------SKIKDQAQVAIDEADVVVFLVDGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGT 342
G+T DEE+A LRK DK +I+AVNK ++ K ++ EF+ LGF + IS
Sbjct: 94 YGITGLDEEVAAVLRKK--DKKVIVAVNKIDNYIKNQDRIYEFFGLGFEEVIGISGEHKV 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD + + +K+ + EEE + +IA++GRPN GKSS++N ++ ++R+IVS I
Sbjct: 152 NLGDLLDAIIGKFEKMNTVQ---EEE--VLSIAVLGRPNAGKSSLVNKILNKERSIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+ID++F + +K+R+IDTAGIR+++ I S E SV RA +AI R+DV
Sbjct: 207 AGTTRDSIDSDFR-YKNRKYRIIDTAGIRRKSKIDDS---IEYYSVLRAIKAINRADVCV 262
Query: 463 LVIEAMACITEQ 474
L++++ +TEQ
Sbjct: 263 LMLDSTELVTEQ 274
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 105/249 (42%), Gaps = 59/249 (23%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+ V E + +A++GRPN GKS+L N+++ R+IV D G TRD + + ++
Sbjct: 167 MNTVQEEEVLSIAVLGRPNAGKSSLVNKILNKERSIVSDIAGTTRDSIDSDFRYKNRKYR 226
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
++DT G+ SK +I +V R A AI +
Sbjct: 227 IIDTAGIRRKSKIDDSI-------------------EYYSVLR--------AIKAINRAD 259
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL 334
V + ++D +T D+ +A + K +I+A+NK + K V +F L + L
Sbjct: 260 VCVLMLDSTELVTEQDKRVAGLIHDE--KKPLIIAINKWDLIEKDNSTVKQFTELVKTEL 317
Query: 335 P---------ISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKS 385
P +SA++G +LD + D+ EE N+ + +
Sbjct: 318 PFLSYAPVITMSALTGQRVMPILDQI----------NDVFEEYNKKIS-----------T 356
Query: 386 SILNALVGE 394
+LN ++GE
Sbjct: 357 GVLNQVLGE 365
>gi|295692881|ref|YP_003601491.1| GTP-binding protein enga [Lactobacillus crispatus ST1]
gi|295030987|emb|CBL50466.1| GTP-binding protein engA [Lactobacillus crispatus ST1]
Length = 435
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 138/314 (43%), Positives = 186/314 (59%), Gaps = 43/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVG+PNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F L+DTGG
Sbjct: 2 VLPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKPGVTRDRNYAQAEWMGHKFDLIDTGG- 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
I EG ++ I QA AIEE+ VI+ L +
Sbjct: 61 -------------------ITWEG----------GKIEEEIRAQAEIAIEEADVIVMLTN 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+T DE IA L + K +ILAVNK ++P + + +F+SLG P+P+S+
Sbjct: 92 VVNHVTDLDERIAHLLYRT--KKPVILAVNKADNPEQR-SDIYDFYSLGLGDPIPVSSSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG G+LLD + ++ +D E + + + +++GRPNVGKSSI+N L+GEDR IV+
Sbjct: 149 GTGIGDLLDQIVNDF-----PDDKDTEADDVISFSVIGRPNVGKSSIVNKLLGEDRVIVA 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
GTTRDA+DT FT +G KF+++DTAGIR+R + TE SV RA AI RSDV
Sbjct: 204 NEEGTTRDAVDTPFTH-DGVKFKVVDTAGIRRRGKVYEK---TEKYSVMRAMSAIERSDV 259
Query: 461 VALVIEAMACITEQ 474
V LVI+A I EQ
Sbjct: 260 VLLVIDASTGIREQ 273
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 42/206 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS++ N+L+G +R IV +E G TRD + +F +VDT G+ +
Sbjct: 178 SVIGRPNVGKSSIVNKLLGEDRVIVANEEGTTRDAVDTPFTHDGVKFKVVDTAGI----R 233
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E T + +V R A +AIE S V++ ++D G+
Sbjct: 234 RRGKVYE---------------KTEKYSVMR--------AMSAIERSDVVLLVIDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSP-LPIS 337
D+ +A + + + II+ VNK + P+K EF L ++P L +S
Sbjct: 271 REQDKHVAGYAHE--AGRGIIIVVNKWDLPKKNSTSAKEFEREIRDEFQYLDYAPILFVS 328
Query: 338 AISGTGTGELLDLVCSELKKVEGTED 363
A TG+ LD + + +K+V ++
Sbjct: 329 A----KTGQRLDQIPNMVKEVYDNQN 350
>gi|300361577|ref|ZP_07057754.1| ribosome-associated GTPase EngA [Lactobacillus gasseri JV-V03]
gi|300354196|gb|EFJ70067.1| ribosome-associated GTPase EngA [Lactobacillus gasseri JV-V03]
Length = 435
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 184/313 (58%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+ GVTRDR+Y R+ W HEF+L+DTGG
Sbjct: 3 LPIVALVGRPNVGKSTIFNRIINSRVAIVEDKAGVTRDRIYARAEWMGHEFILIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I L + E + I+ QA AI+E+ VI+ L D
Sbjct: 61 -----------------------ITLDSGE-----IEEQIKAQAEIAIDEADVIVMLGDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K IILAVNK ++P + + +F+SLG P+P+S G
Sbjct: 93 TQHMTNMDETIAKMLYRT--KKPIILAVNKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + E G + E++ I +++GRPNVGKSS++NA++GE R IVS
Sbjct: 150 TGMGDLLDAIVGEF----GNKANQHEDDSI-RFSVIGRPNVGKSSLVNAILGEQRVIVSN 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRDAIDT FT +GQK+ ++DTAGIR+R + TE SV RA AI SD+
Sbjct: 205 IEGTTRDAIDTTFTN-DGQKYTIVDTAGIRRRGKVYEK---TEKYSVLRAISAIEESDIT 260
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 261 LLVLDASTGIREQ 273
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N ++G R IV + G TRD + ++ +VDT G+
Sbjct: 176 RFSVIGRPNVGKSSLVNAILGEQRVIVSNIEGTTRDAIDTTFTNDGQKYTIVDTAGI--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A +AIEES + + ++D
Sbjct: 233 -RRRGKVYE---------------KTEKYSVLR--------AISAIEESDITLLVLDAST 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLP- 335
G+ D+ +A + + +I+ VNK + P+K + EF L ++P+
Sbjct: 269 GIREQDKHVAGYAHD--AGRGVIIVVNKWDLPKKDSTSMKDFENTIRQEFQYLDYAPIVF 326
Query: 336 ISAISGTGTGELLDLVC----SELKKVEGT--EDLVEEENRIPAIAIV 377
+SA +G ++L LV ++ ++++ + DL+ E RI +V
Sbjct: 327 VSAKTGQRVPDILKLVKEVHDNQTRRIKSSVLNDLLLEATRITPTPLV 374
>gi|402571674|ref|YP_006621017.1| ribosome-associated GTPase EngA [Desulfosporosinus meridiei DSM
13257]
gi|402252871|gb|AFQ43146.1| ribosome-associated GTPase EngA [Desulfosporosinus meridiei DSM
13257]
Length = 443
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 188/312 (60%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ GG AIV + PGVTRDR+Y + W +F L+DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRITGGLVAIVENMPGVTRDRLYRDAEWLGRKFALIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
EG P++ S + RQA A+EE+ V+IF+VD Q
Sbjct: 62 ----------------EFKDEGTPIS----------SQMRRQAEIAMEEADVVIFVVDAQ 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
T DE IA LR++ K ++LA NK E K Q+ EF S G +PISA+ G
Sbjct: 96 ISPTPEDELIARTLRRS--GKPVLLAANKVEDFTKIEGQLYEFLSFGLGEAIPISAVHGM 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
TG+LLDLV S L E +D E + + I+++GRPNVGKSS++N L+G +R IVS I
Sbjct: 154 NTGDLLDLVISHLP--ENNDD--EFDPDVIRISVIGRPNVGKSSLVNTLLGRERVIVSNI 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F EG+ + LIDTAG+R+++ I TE SV R+ RA+ RSD +
Sbjct: 210 PGTTRDAIDTPFEH-EGKHYILIDTAGMRRKSRIE---ELTEQYSVVRSLRAVDRSDAIL 265
Query: 463 LVIEAMACITEQ 474
++I+A+ +TEQ
Sbjct: 266 MLIDAVDGVTEQ 277
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
R++++GRPNVGKS+L N L+G R IV + PG TRD + F EHE ++L+DT G+
Sbjct: 180 RISVIGRPNVGKSSLVNTLLGRERVIVSNIPGTTRDAI-DTPF--EHEGKHYILIDTAGM 236
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ +E+L T + +V R + A++ S I+ L+D
Sbjct: 237 RRKSR-----IEEL--------------TEQYSVVR--------SLRAVDRSDAILMLID 269
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP 333
G+T D++IA + + K IIL VNK + K +++F L ++P
Sbjct: 270 AVDGVTEQDKKIAGYAEE--AGKAIILVVNKWDLVEKDEKTINKFEKSIREELGFLQYAP 327
Query: 334 -LPISAISGTGTGELLDLV 351
+ ISA +G ++LDLV
Sbjct: 328 TMFISAKTGQRVNKILDLV 346
>gi|392960765|ref|ZP_10326230.1| GTP-binding protein engA [Pelosinus fermentans DSM 17108]
gi|421054477|ref|ZP_15517445.1| ribosome-associated GTPase EngA [Pelosinus fermentans B4]
gi|421057821|ref|ZP_15520586.1| GTP-binding protein engA [Pelosinus fermentans B3]
gi|421067194|ref|ZP_15528699.1| GTP-binding protein engA [Pelosinus fermentans A12]
gi|421071339|ref|ZP_15532459.1| GTP-binding protein engA [Pelosinus fermentans A11]
gi|392440835|gb|EIW18495.1| ribosome-associated GTPase EngA [Pelosinus fermentans B4]
gi|392447255|gb|EIW24509.1| GTP-binding protein engA [Pelosinus fermentans A11]
gi|392450622|gb|EIW27654.1| GTP-binding protein engA [Pelosinus fermentans A12]
gi|392454662|gb|EIW31484.1| GTP-binding protein engA [Pelosinus fermentans DSM 17108]
gi|392462100|gb|EIW38218.1| GTP-binding protein engA [Pelosinus fermentans B3]
Length = 440
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 191/312 (61%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS LFN + +IV + PGVTRDR+Y + W + EF ++DTGG+
Sbjct: 4 PILAIVGRPNVGKSTLFNYIGQKRVSIVENIPGVTRDRIYLDAEWLDREFTMIDTGGI-E 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ S +M + + QA AI+E+ I+F+VDG+
Sbjct: 63 IESSD----------------------------KMLTAMRYQAKLAIDEADAILFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT+ADEE+A LR K +I+AVNK ++ +K ++ EF++LG P+ ISA +
Sbjct: 95 VGLTSADEEVAIILRNTR--KPVIVAVNKVDNMQKA-NEIYEFYNLGLGDPIAISAANAL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V L +++VEE+N +A++GRPNVGKSS++N LVGE+R IVS +
Sbjct: 152 NIGDLLDEVVKRLP----NDEVVEEDNETIKVAVIGRPNVGKSSLVNRLVGEERVIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT FT + F LIDTAG+R++A + E SV RA RA+ RSDVV
Sbjct: 208 AGTTRDAIDTHFT-KDDTSFVLIDTAGMRRKAKVELP---VERYSVMRALRAVDRSDVVL 263
Query: 463 LVIEAMACITEQ 474
+VI+A+ +TEQ
Sbjct: 264 IVIDAVDGVTEQ 275
>gi|148656272|ref|YP_001276477.1| GTP-binding protein EngA [Roseiflexus sp. RS-1]
gi|148568382|gb|ABQ90527.1| small GTP-binding protein [Roseiflexus sp. RS-1]
Length = 493
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 143/312 (45%), Positives = 188/312 (60%), Gaps = 34/312 (10%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL+G RAIV D PG TRDR+YG + W F +VDT G+L
Sbjct: 3 PIVALVGRPNVGKSTLFNRLIGERRAIVEDIPGTTRDRLYGDTEWNGRVFTVVDTAGLL- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ ED T G + +A R + QA AIEE+ IIF+VD +
Sbjct: 62 -------LDED---DLTPGTPQLEIARR----------VREQAEIAIEEADAIIFIVDSR 101
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD +A+ LR+ K ++LA NK ++ R+ + EF++L P+P+SA G
Sbjct: 102 EGLTAADAAVAEVLRR--ASKPVVLAANKADN-RERALDAVEFYALNLGEPIPMSAYHGI 158
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V L +E EE++ IAIVGRPNVGKSS+LN L+G++R++VS +
Sbjct: 159 GVGDVLDRVTDVLPIIEA-----EEDDAAVKIAIVGRPNVGKSSLLNRLIGQERSVVSDV 213
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD+IDT +G K LIDTAGIR+R I E SV RA RAI R+DV
Sbjct: 214 PGTTRDSIDTPVE-IDGIKALLIDTAGIRRRGKIERG---LERYSVMRALRAIERADVAL 269
Query: 463 LVIEAMACITEQ 474
L+I+A +T Q
Sbjct: 270 LLIDATEGVTAQ 281
>gi|421074409|ref|ZP_15535441.1| GTP-binding protein engA [Pelosinus fermentans JBW45]
gi|392527450|gb|EIW50544.1| GTP-binding protein engA [Pelosinus fermentans JBW45]
Length = 440
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 191/312 (61%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS LFN + +IV + PGVTRDR+Y + W + EF ++DTGG+
Sbjct: 4 PILAIVGRPNVGKSTLFNYIGQKRVSIVENIPGVTRDRIYLDAEWLDREFTMIDTGGI-E 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ S +M + + QA AI+E+ I+F+VDG+
Sbjct: 63 IESSD----------------------------KMLTAMRYQAKLAIDEADAILFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT+ADEE+A LR K +I+AVNK ++ +K ++ EF++LG P+ ISA +
Sbjct: 95 VGLTSADEEVAIILRNTR--KPVIVAVNKVDNMQKA-NEIYEFYNLGLGDPIAISAANAL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V L +++VEE+N +A++GRPNVGKSS++N LVGE+R IVS +
Sbjct: 152 NIGDLLDEVVKRLP----NDEVVEEDNETIKVAVIGRPNVGKSSLVNRLVGEERVIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT FT + F LIDTAG+R++A + E SV RA RA+ RSDVV
Sbjct: 208 AGTTRDAIDTHFT-KDDTSFVLIDTAGMRRKAKVELP---VERYSVMRALRAVDRSDVVL 263
Query: 463 LVIEAMACITEQ 474
+VI+A+ +TEQ
Sbjct: 264 IVIDAVDGVTEQ 275
>gi|219109543|ref|XP_002176526.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411061|gb|EEC50989.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 551
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 146/324 (45%), Positives = 191/324 (58%), Gaps = 49/324 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNR--AIVVDEPGVTRDRMYGRS-FWGEHEFMLVDTGG 220
P +AIVGRPNVGKSAL NR+ G AIV DE G+TRDR Y + F GE FM+VDTGG
Sbjct: 70 PLIAIVGRPNVGKSALVNRIAGSQSGGAIVADESGITRDRTYRPAEFLGER-FMIVDTGG 128
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ + +D T L +E I QA AIEES +I +V
Sbjct: 129 L---------VFDDDEST---------LFAKE---------IREQAMVAIEESAAVIMVV 161
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ GLT D IA++LRK +D + +AVNKCES + G M ++FW LG P P+SA+
Sbjct: 162 DGQTGLTGMDLMIAEFLRKE-VDIPVHVAVNKCESEKTGAMSAADFWGLGLGEPFPVSAL 220
Query: 340 SGTGTGELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRT 397
G GT E+++ + + KK ED EE N IAI+GRPNVGKSS+LN++ G+ R
Sbjct: 221 HGVGTAEIMETIFDSIAEKKTFDAEDRPEEIN----IAIIGRPNVGKSSLLNSIFGDTRA 276
Query: 398 IVSPISGTTRDAIDT--EFTGPEGQK-----FRLIDTAGIRKRAAIASSGSTTEALSVNR 450
IVS ++GTTRD+ID E P G +R +DTAGIR++ + E VNR
Sbjct: 277 IVSEMAGTTRDSIDAVMERPPPPGSDDLSTIYRFVDTAGIRRKGKVDFG---PEFFMVNR 333
Query: 451 AFRAIRRSDVVALVIEAMACITEQ 474
A RAIRR+DVV L+++A + + EQ
Sbjct: 334 ALRAIRRADVVLLILDATSGVAEQ 357
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 78/166 (46%), Gaps = 23/166 (13%)
Query: 319 GIMQVSEFWSLGFSPLPISAISGTGTGELLDLVC--SELKKVEGTEDL-----VEEENRI 371
GI Q + F F PLP++ G LD V S ++ G L + + +
Sbjct: 14 GIWQANSF---TFRPLPVTR-PVIGLLATLDRVNEKSTVEPSSGDPQLQPIRRLRQNKKE 69
Query: 372 PAIAIVGRPNVGKSSILNALVGEDR--TIVSPISGTTRDAI--DTEFTGPEGQKFRLIDT 427
P IAIVGRPNVGKS+++N + G IV+ SG TRD EF G++F ++DT
Sbjct: 70 PLIAIVGRPNVGKSALVNRIAGSQSGGAIVADESGITRDRTYRPAEFL---GERFMIVDT 126
Query: 428 AGIRKRAAIASSGSTTEALSVN-RAFRAIRRSDVVALVIEAMACIT 472
G+ ST A + +A AI S V +V++ +T
Sbjct: 127 GGL----VFDDDESTLFAKEIREQAMVAIEESAAVIMVVDGQTGLT 168
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD 200
PE + +AI+GRPNVGKS+L N + G RAIV + G TRD
Sbjct: 248 PEEI--NIAIIGRPNVGKSSLLNSIFGDTRAIVSEMAGTTRD 287
>gi|357059986|ref|ZP_09120760.1| GTP-binding protein engA [Alloprevotella rava F0323]
gi|355376876|gb|EHG24116.1| GTP-binding protein engA [Alloprevotella rava F0323]
Length = 437
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 141/311 (45%), Positives = 180/311 (57%), Gaps = 43/311 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL G AIV + G TRDR YG+ W EF +VDTGG V+N
Sbjct: 5 VAIVGRPNVGKSTLFNRLTGTRAAIVSEHAGTTRDRQYGKCEWCNREFSIVDTGGWVVN- 63
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+I E+ I +Q A EE+ I+F+VD
Sbjct: 64 ---SDDIFEE--------------------------EIRKQVLVATEEADCILFVVDNDN 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTG 343
G+T D+++A LR+ + +IL NKC+ K I Q +EF+ LG +P ISA +G+G
Sbjct: 95 GITDLDQQVATILRQTKVP--VILCANKCDD-NKDIYQSAEFYGLGLGTPYCISAATGSG 151
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
TG+LLDLV +L G E EEE RIP AIVGRPN GKSS++NA +GEDR IV+ I+
Sbjct: 152 TGDLLDLVLEKL----GPETRQEEEARIPRFAIVGRPNAGKSSLINAFIGEDRHIVTDIA 207
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRD+I T + G F L+DTAGIRK++ + E SV R+ RAI SDV L
Sbjct: 208 GTTRDSILTRY-DKFGFDFYLVDTAGIRKKSKV---NEDLEFYSVMRSIRAIENSDVCIL 263
Query: 464 VIEAMACITEQ 474
+I+A I Q
Sbjct: 264 LIDATRGIESQ 274
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 29/153 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR AIVGRPN GKS+L N +G +R IV D G TRD + R +F LVDT
Sbjct: 172 EARIPRFAIVGRPNAGKSSLINAFIGEDRHIVTDIAGTTRDSILTRYDKFGFDFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ SK + EDL + + ++ AIE S V I L
Sbjct: 232 GIRKKSK----VNEDLEFYSVM-----------------------RSIRAIENSDVCILL 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
+D G+ + D I +++N K +++A+NK
Sbjct: 265 IDATRGIESQDMNIFQLVQRN--QKSLVVAINK 295
>gi|159900085|ref|YP_001546332.1| GTP-binding protein EngA [Herpetosiphon aurantiacus DSM 785]
gi|238687093|sp|A9B567.1|DER_HERA2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|159893124|gb|ABX06204.1| small GTP-binding protein [Herpetosiphon aurantiacus DSM 785]
Length = 455
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 187/312 (59%), Gaps = 35/312 (11%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L+G RAI+ DE G TRDR YG + W F +VDT G+L
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLIGERRAIIADEAGTTRDRQYGETIWNGRVFTIVDTAGLL- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V PN +PL A + +QA AI+E+ VI+F+VD +
Sbjct: 63 VGDDDPN---------------LPL-------AEIVRRTHQQAQLAIDEADVIVFMVDVR 100
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AADEE+A LR++ K ++L VNK ++ + V EF++LG P+ +SA GT
Sbjct: 101 EGLIAADEEVAALLRRS--SKPVVLGVNKADTEDRRQNAV-EFYNLGLGDPIALSAYHGT 157
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+G+LLD + L G E+ EE++ IAIVGRPNVGKSS+LN LVGE+R +VS I
Sbjct: 158 GSGDLLDEIVRHLPA--GQEE--EEDDNSLKIAIVGRPNVGKSSLLNKLVGEERVVVSNI 213
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD+IDT+ T +G LIDTAGIR+R +I E SV R +AI R +
Sbjct: 214 PGTTRDSIDTKLT-YKGIPITLIDTAGIRRRGSIEQG---IERYSVLRTMKAIERCHIAL 269
Query: 463 LVIEAMACITEQ 474
++++A T Q
Sbjct: 270 ILVDAQEGPTAQ 281
>gi|311030574|ref|ZP_07708664.1| GTP-binding protein EngA [Bacillus sp. m3-13]
Length = 436
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 138/314 (43%), Positives = 188/314 (59%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W F ++DTGG+
Sbjct: 4 PTVAIVGRPNVGKSTIFNRIVGERISIVEDVPGVTRDRIYSSGEWLNQYFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E + A + I QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------------------EISDAPFMTQIREQAEIAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEFWSLGFS-PLPISAIS 340
GLT+ADEE+A L ++ K +++AVNK ++P M+ + +F++LGF P+PIS
Sbjct: 94 EGLTSADEEVAKILYRS--KKPVVVAVNKVDNPD---MRDTLYDFYALGFGEPIPISGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G+LLD V K E + + I +++GRPNVGKSS++NAL+GE+R IVS
Sbjct: 149 GLGLGDLLDFVIENFPKDEEED----YDEDIIKFSLIGRPNVGKSSLVNALLGEERVIVS 204
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I+GTTRDAIDT ++ +G+ + +IDTAG+RK+ + TTE SV RA RAI RSDV
Sbjct: 205 DIAGTTRDAIDTPYSY-DGKDYVIIDTAGMRKKGKVY---ETTEKYSVLRALRAIERSDV 260
Query: 461 VALVIEAMACITEQ 474
V +VI I EQ
Sbjct: 261 VLVVINGEEGIIEQ 274
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N L+G R IV D G TRD + + +++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSLVNALLGEERVIVSDIAGTTRDAIDTPYSYDGKDYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIE S V++ +++G+
Sbjct: 234 -RKKGKVYE---------------TTEKYSVLR--------ALRAIERSDVVLVVINGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D++IA + + + I++ VNK ++ K + EF
Sbjct: 270 GIIEQDKKIAGYAHE--AGRAIVIVVNKWDAVEKDEKTMKEF 309
>gi|114794390|pdb|2HJG|A Chain A, The Crystal Structure Of The B. Subtilis Yphc Gtpase In
Complex With Gdp
Length = 436
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I +QA A +E+ VIIF V+G+
Sbjct: 62 ----------------DIGDE--PFL----------AQIRQQAEIAXDEADVIIFXVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L + K ++LAVNK ++ + +F+SLGF P PIS G
Sbjct: 94 EGVTAADEEVAKILYR--TKKPVVLAVNKLDNTEXR-ANIYDFYSLGFGEPYPISGTHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K + T+ EE + ++GRPNVGKSS++NA +GE+R IVS +
Sbjct: 151 GLGDLLDAVAEHFKNIPETK--YNEE--VIQFCLIGRPNVGKSSLVNAXLGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT FT + Q+F ++DTAG RK+ + TTE SV RA +AI RS+VVA
Sbjct: 207 AGTTRDAVDTSFTYNQ-QEFVIVDTAGXRKKGKVY---ETTEKYSVLRALKAIDRSEVVA 262
Query: 463 LVIEAMACITEQ 474
+V++ I EQ
Sbjct: 263 VVLDGEEGIIEQ 274
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 33/174 (18%)
Query: 157 NVPE----HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
N+PE + + ++GRPNVGKS+L N +G R IV + G TRD + + + E
Sbjct: 165 NIPETKYNEEVIQFCLIGRPNVGKSSLVNAXLGEERVIVSNVAGTTRDAVDTSFTYNQQE 224
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F++VDT G + + + E T + +V R A AI+
Sbjct: 225 FVIVDTAG----XRKKGKVYE---------------TTEKYSVLR--------ALKAIDR 257
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
S V+ ++DG+ G+ D+ IA + + K +++ VNK ++ K EF
Sbjct: 258 SEVVAVVLDGEEGIIEQDKRIAGYAHE--AGKAVVIVVNKWDAVDKDESTXKEF 309
>gi|395243558|ref|ZP_10420543.1| GTPase Der [Lactobacillus hominis CRBIP 24.179]
gi|394484178|emb|CCI81551.1| GTPase Der [Lactobacillus hominis CRBIP 24.179]
Length = 435
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 136/313 (43%), Positives = 186/313 (59%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV DEPGVTRDR+Y ++ W HEF+L+DTGG
Sbjct: 3 LPIVALVGRPNVGKSTIFNRIIKSRVAIVEDEPGVTRDRIYSKAEWMGHEFILIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I L + E + I+ QA AI+E+ VI+ L D
Sbjct: 61 -----------------------ITLDSGE-----IDEQIKAQAEIAIDEADVIVMLGDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
LT+ DE IA L + K +ILAVNK ++P + + +F+SLGF P+P+S G
Sbjct: 93 TNHLTSMDETIAKMLYRT--KKPVILAVNKADNPEQR-NDIYDFYSLGFGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + ++ G + E++ I +++GRPNVGKSS++NA++GE R IV+
Sbjct: 150 TGVGDLLDTIVAQF----GDKANQHEDDAI-RFSVIGRPNVGKSSLVNAILGEQRVIVAD 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
+ GTTRDAIDT F GQK+ ++DTAGIR+R + TE SV RA AI SD+
Sbjct: 205 MEGTTRDAIDTSFNH-NGQKYTIVDTAGIRRRGKVYEK---TEKYSVLRAVSAIENSDIT 260
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 261 LLVLDASTGIREQ 273
>gi|259046866|ref|ZP_05737267.1| ribosome-associated GTPase EngA [Granulicatella adiacens ATCC
49175]
gi|259036489|gb|EEW37744.1| ribosome-associated GTPase EngA [Granulicatella adiacens ATCC
49175]
Length = 437
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 183/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +A+VGRPNVGKS +FNR+VG +IV D GVTRDR+Y W H F ++DTGG+
Sbjct: 4 PVIAVVGRPNVGKSTIFNRIVGERISIVEDIAGVTRDRIYSEGEWLGHSFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+I ++ P S I QA A+EE+ VIIFL +
Sbjct: 62 ------DITDE------------PFM----------SNIRMQAEIAMEEADVIIFLTSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T DE IA L + +K ++LAVNK ++P ++ +F++LGF P PIS G
Sbjct: 94 EGVTTTDEHIAKLLYRT--NKPVLLAVNKVDNPELR-SEIFDFYALGFGEPFPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + +G EE+ + + +GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDLLDAAVKAFPEDKGD----EEDKDVIKFSFIGRPNVGKSSLVNAMLGEERVIVSNV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F EG F++IDTAGIRK+ + S TE SV RA RAI RSD+V
Sbjct: 207 AGTTRDAIDTTFEDEEGTVFKMIDTAGIRKKGRVFES---TEKYSVLRALRAIERSDIVC 263
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 264 VVLNAEEGIQEQ 275
>gi|255521525|ref|ZP_05388762.1| GTP-binding protein EngA [Listeria monocytogenes FSL J1-175]
Length = 259
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 139/301 (46%), Positives = 181/301 (60%), Gaps = 50/301 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
DL+ + I QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------DLSDEPFL------------------EQIRAQAEIAIDEADVIIFITNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K I+LA+NK ++P Q+ +F+SLGF P PIS G
Sbjct: 94 EGVTDADEQVAKILYRS--NKPIVLAINKVDNPEMR-DQIYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIP----AIAIVGRPNVGKSSILNALVGEDRTI 398
G G++LD V + K EEE P +++GRPNVGKSSILNAL+GEDR I
Sbjct: 151 GLGDMLDAVRAHFPK--------EEEEEYPDDTVKFSLIGRPNVGKSSILNALLGEDRVI 202
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VS I+GTTRDAIDT +T +GQ + +IDTAG+RKR + S TE SV RA RAI RS
Sbjct: 203 VSDIAGTTRDAIDTTYTF-DGQDYVMIDTAGMRKRGKVYES---TEKYSVLRAMRAIERS 258
Query: 459 D 459
D
Sbjct: 259 D 259
>gi|422343693|ref|ZP_16424620.1| ribosome-associated GTPase EngA [Selenomonas noxia F0398]
gi|355378109|gb|EHG25300.1| ribosome-associated GTPase EngA [Selenomonas noxia F0398]
Length = 441
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 143/312 (45%), Positives = 189/312 (60%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF+++DTGG
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRISIVDDMPGVTRDRIYMDAEWLNHEFIMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + + M S QA AIEE+ VI+FLVDG+
Sbjct: 61 ----------------------IEFDESDHILRSMRS----QAELAIEEADVILFLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT++DEE+A LR+ K +ILAVNK +S + + + +F++LG P+PISA +
Sbjct: 95 AGLTSSDEEVARILRRT--QKPVILAVNKIDSFDREAL-IYDFYALGLGDPIPISASNAM 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD+V + + D E + I AIA+VGRPNVGKSS++N L+GEDR IVS +
Sbjct: 152 NLGDLLDMVAAAFPR---ATDADAESDEI-AIAVVGRPNVGKSSLVNRLLGEDRVIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT FT +G K+ LIDTAG+R++ I E SV R+ RAI R+ VV
Sbjct: 208 PGTTRDAIDTHFT-RDGVKYLLIDTAGMRRKGKITLP---VERYSVMRSLRAIDRAGVVL 263
Query: 463 LVIEAMACITEQ 474
+VI A I EQ
Sbjct: 264 MVINAAEGILEQ 275
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 29/149 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS+L NRL+G +R IV D PG TRD + +++L+DT G+
Sbjct: 179 IAVVGRPNVGKSSLVNRLLGEDRVIVSDVPGTTRDAIDTHFTRDGVKYLLIDTAGMRRKG 238
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K I L +V R + AI+ + V++ +++ G
Sbjct: 239 K-------------------ITLPVERYSVMR--------SLRAIDRAGVVLMVINAAEG 271
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCE 314
+ D +IA ++ ++ K +I+ VNK +
Sbjct: 272 ILEQDTKIAGYVHES--GKGVIIVVNKWD 298
>gi|310778034|ref|YP_003966367.1| ribosome-associated GTPase EngA [Ilyobacter polytropus DSM 2926]
gi|309747357|gb|ADO82019.1| ribosome-associated GTPase EngA [Ilyobacter polytropus DSM 2926]
Length = 439
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 190/312 (60%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+LVG AIV D+PGVTRDR+Y + W EF++VDTGG+
Sbjct: 3 PIVAIVGRPNVGKSTLFNKLVGDRIAIVDDQPGVTRDRLYRETDWLGTEFVIVDTGGLEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+K M + I++QA AI E+ VI+F+VDG+
Sbjct: 63 RNKD-----------------------------FMMTKIKQQAEVAINEADVILFVVDGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+TA DEE+A LRK +K +IL VNK ++ ++ V +FWSLGF LPISA
Sbjct: 94 AGVTALDEEVAYILRKK--NKPVILCVNKVDNFQRQSDDVYDFWSLGFEFLLPISAEHKL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G++LD + + ++E E+ E +AI+G+PN GKSS++N L G++R IVS I
Sbjct: 152 NLGDMLDTIVQNINQLELPEEEEEGL----KLAIIGKPNAGKSSLVNRLSGKERAIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F K+ LIDTAGIR+++ + S E SV RA + I+RSDV
Sbjct: 208 AGTTRDAIDTTFEY-NYNKYILIDTAGIRRKSKVEES---LEYYSVLRAIKTIKRSDVCM 263
Query: 463 LVIEAMACITEQ 474
L+++A ITEQ
Sbjct: 264 LMLDAQEGITEQ 275
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 38/193 (19%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
AI+G+PN GKS+L NRL G RAIV D G TRD + + ++++L+DT G+ SK
Sbjct: 180 AIIGKPNAGKSSLVNRLSGKERAIVSDIAGTTRDAIDTTFEYNYNKYILIDTAGIRRKSK 239
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ E L + + +A I+ S V + ++D Q G+
Sbjct: 240 VE----ESLEYYSVL-----------------------RAIKTIKRSDVCMLMLDAQEGI 272
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP---------IS 337
T D++IA K II+ +NK ++ +K + + +L S LP +S
Sbjct: 273 TEQDKKIAGIAYDE--KKPIIVVMNKWDALKKETNTMKDMKALILSELPFLNYAPVEFVS 330
Query: 338 AISGTGTGELLDL 350
A++G T +LLDL
Sbjct: 331 ALTGQRTLKLLDL 343
>gi|116629548|ref|YP_814720.1| GTP-binding protein EngA [Lactobacillus gasseri ATCC 33323]
gi|116095130|gb|ABJ60282.1| Predicted GTPase [Lactobacillus gasseri ATCC 33323]
Length = 427
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 184/313 (58%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+ GVTRDR+Y R+ W HEF+L+DTGG
Sbjct: 3 LPIVALVGRPNVGKSTIFNRIINSRVAIVEDKAGVTRDRIYARAEWMGHEFILIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I L + E + I+ QA AI+E+ VI+ L D
Sbjct: 61 -----------------------ITLDSGE-----IEEQIKAQAEIAIDEADVIVMLGDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K IILAVNK ++P + + +F+SLG P+P+S G
Sbjct: 93 TQHMTNMDETIAKMLYRT--KKPIILAVNKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + E G + E++ I +++GRPNVGKSS++NA++GE R IVS
Sbjct: 150 TGMGDLLDAIVGEF----GDKANQHEDDSI-RFSVIGRPNVGKSSLVNAILGEQRVIVSN 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRDAIDT FT +GQK+ ++DTAGIR+R + TE SV RA AI SD+
Sbjct: 205 IEGTTRDAIDTTFTN-DGQKYTIVDTAGIRRRGKVYEK---TEKYSVLRAISAIEESDIT 260
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 261 LLVLDASTGIREQ 273
>gi|386714590|ref|YP_006180913.1| GTP-binding protein EngA [Halobacillus halophilus DSM 2266]
gi|384074146|emb|CCG45639.1| GTP-binding protein EngA [Halobacillus halophilus DSM 2266]
Length = 436
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 137/311 (44%), Positives = 189/311 (60%), Gaps = 44/311 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS +FNRLVG +IV D PGVTRDR+Y W F ++DTGG+
Sbjct: 6 MAIVGRPNVGKSTIFNRLVGERISIVEDTPGVTRDRIYAEGEWLNERFNVIDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E + + RE QA AI+E+ VI+F+V+G+ G
Sbjct: 62 --------------ELGDEPLLVQMRE------------QAQVAIDEADVIVFMVNGRDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T ADEE+A L K+ +K ++LAVNK ++P + EF+SLGF P PIS G G
Sbjct: 96 ITGADEEVAKILYKS--NKPVVLAVNKVDNPEMR-ENIYEFYSLGFGEPHPISGTHGLGL 152
Query: 345 GELLDLVCSELKKVEGTEDLVEE-ENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
G++LD V E ++EE ++ I +++GRPNVGKSS++N L+G++R IVS I+
Sbjct: 153 GDMLDEVVKYF-----PEKILEEIDDDIIRFSVIGRPNVGKSSLVNTLLGQERVIVSDIA 207
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRDAIDT F+ + + + +IDTAG+RKR I + TE S+ RA +AI RSDVV
Sbjct: 208 GTTRDAIDTPFS-KDDRDYVIIDTAGMRKRGKIYEA---TEKYSIMRAMKAIERSDVVLS 263
Query: 464 VIEAMACITEQ 474
+I+A I EQ
Sbjct: 264 LIDADTGIQEQ 274
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N L+G R IV D G TRD + + +++++DT G+
Sbjct: 177 RFSVIGRPNVGKSSLVNTLLGQERVIVSDIAGTTRDAIDTPFSKDDRDYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + I E AT + ++ R A AIE S V++ L+D
Sbjct: 234 -RKRGKIYE---------------ATEKYSIMR--------AMKAIERSDVVLSLIDADT 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
G+ D++IA + + K +I+ VNK ++
Sbjct: 270 GIQEQDKKIAGYAHE--AGKAVIIVVNKWDT 298
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAG 429
R +AIVGRPNVGKS+I N LVGE +IV G TRD I E ++F +IDT G
Sbjct: 2 RKSVMAIVGRPNVGKSTIFNRLVGERISIVEDTPGVTRDRIYAEGEWL-NERFNVIDTGG 60
Query: 430 I 430
I
Sbjct: 61 I 61
>gi|238852698|ref|ZP_04643108.1| ribosome-associated GTPase EngA [Lactobacillus gasseri 202-4]
gi|282852069|ref|ZP_06261427.1| ribosome-associated GTPase EngA [Lactobacillus gasseri 224-1]
gi|238834844|gb|EEQ27071.1| ribosome-associated GTPase EngA [Lactobacillus gasseri 202-4]
gi|282556829|gb|EFB62433.1| ribosome-associated GTPase EngA [Lactobacillus gasseri 224-1]
Length = 435
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 184/313 (58%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+ GVTRDR+Y R+ W HEF+L+DTGG
Sbjct: 3 LPIVALVGRPNVGKSTIFNRIINSRVAIVEDKAGVTRDRIYARAEWMGHEFILIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I L + E + I+ QA AI+E+ VI+ L D
Sbjct: 61 -----------------------ITLDSGE-----IEEQIKAQAEIAIDEADVIVMLGDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K IILAVNK ++P + + +F+SLG P+P+S G
Sbjct: 93 TQHMTNMDETIAKMLYRT--KKPIILAVNKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + E G + E++ I +++GRPNVGKSS++NA++GE R IVS
Sbjct: 150 TGMGDLLDAIVGEF----GDKANQHEDDSI-RFSVIGRPNVGKSSLVNAILGEQRVIVSN 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRDAIDT FT +GQK+ ++DTAGIR+R + TE SV RA AI SD+
Sbjct: 205 IEGTTRDAIDTTFTN-DGQKYTIVDTAGIRRRGKVYEK---TEKYSVLRAISAIEESDIT 260
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 261 LLVLDASTGIREQ 273
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N ++G R IV + G TRD + ++ +VDT G+
Sbjct: 176 RFSVIGRPNVGKSSLVNAILGEQRVIVSNIEGTTRDAIDTTFTNDGQKYTIVDTAGI--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A +AIEES + + ++D
Sbjct: 233 -RRRGKVYE---------------KTEKYSVLR--------AISAIEESDITLLVLDAST 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLP- 335
G+ D+ +A + + +I+ VNK + P+K + EF L ++P+
Sbjct: 269 GIREQDKHVAGYAHD--AGRGVIIVVNKWDLPKKDSTSMKDFEDTIRQEFQYLDYAPIVF 326
Query: 336 ISAISGTGTGELLDLVC----SELKKVEGT--EDLVEEENRIPAIAIV 377
+SA +G ++L LV ++ ++++ + DL+ E RI +V
Sbjct: 327 VSAKTGQRVPDILKLVKEVHDNQTRRIKSSVLNDLLLEATRITPTPLV 374
>gi|420147300|ref|ZP_14654576.1| GTPase Der (GTP-binding protein EngA) [Lactobacillus gasseri CECT
5714]
gi|398401301|gb|EJN54803.1| GTPase Der (GTP-binding protein EngA) [Lactobacillus gasseri CECT
5714]
Length = 435
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 184/313 (58%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+ GVTRDR+Y R+ W HEF+L+DTGG
Sbjct: 3 LPIVALVGRPNVGKSTIFNRIINSRVAIVEDKAGVTRDRIYARAEWMGHEFILIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I L + E + I+ QA AI+E+ VI+ L D
Sbjct: 61 -----------------------ITLDSGE-----IEEQIKAQAEIAIDEADVIVMLGDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K IILAVNK ++P + + +F+SLG P+P+S G
Sbjct: 93 TQHMTNMDETIAKMLYRT--KKPIILAVNKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + E G + E++ I +++GRPNVGKSS++NA++GE R IVS
Sbjct: 150 TGMGDLLDAIVGEF----GDKANQHEDDSI-RFSVIGRPNVGKSSLVNAILGEQRVIVSN 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRDAIDT FT +GQK+ ++DTAGIR+R + TE SV RA AI SD+
Sbjct: 205 IEGTTRDAIDTTFTN-DGQKYTIVDTAGIRRRGKVYEK---TEKYSVLRAISAIEESDIT 260
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 261 LLVLDASTGIREQ 273
>gi|259503207|ref|ZP_05746109.1| ribosome-associated GTPase EngA [Lactobacillus antri DSM 16041]
gi|259168864|gb|EEW53359.1| ribosome-associated GTPase EngA [Lactobacillus antri DSM 16041]
Length = 437
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 133/311 (42%), Positives = 186/311 (59%), Gaps = 42/311 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G +IV D PGVTRDR+Y W F ++DTGG
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGERISIVEDTPGVTRDRIYAHGEWLGKNFNMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + PL T+ I +QA AI+E+ VI+ +VD +
Sbjct: 61 -----------------IELSDQPLLTQ----------IRQQAEIAIDEADVIVLVVDVE 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+G+T ADE++A L ++ +K ++LAVNK ++P + V +F+SLG P P+S++ G
Sbjct: 94 SGVTDADEQVARILYRS--NKPVVLAVNKVDNPERR-NDVYDFYSLGLGEPYPVSSVHGV 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V E+ E + +++GRPNVGKSS++N ++GE+R IVS +
Sbjct: 151 GLGDLLDAVIHHFP-----ENAANEADDSIRFSLIGRPNVGKSSLVNGILGENRVIVSNM 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAI+T F P+GQ+F +IDTAGIRK+ I + TE ++ RA RAI SDVV
Sbjct: 206 AGTTRDAINTRFVAPDGQEFTMIDTAGIRKQGKIYEN---TERYALMRAMRAIDDSDVVL 262
Query: 463 LVIEAMACITE 473
+V+ A I E
Sbjct: 263 VVLNAEEGIRE 273
>gi|219669400|ref|YP_002459835.1| GTP-binding protein EngA [Desulfitobacterium hafniense DCB-2]
gi|254783150|sp|B8G2P9.1|DER_DESHD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|219539660|gb|ACL21399.1| small GTP-binding protein [Desulfitobacterium hafniense DCB-2]
Length = 441
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 192/313 (61%), Gaps = 43/313 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL GG AIV + PGVTRDR+Y S W +F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRLAGGLVAIVENRPGVTRDRLYRDSEWLGRKFTIIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+ E+ +I+ + + RQA AIEE+ VI+F++D Q
Sbjct: 64 VN-------ENTSIS---------------------AQMRRQAEIAIEEADVIVFVIDAQ 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
T D+ IA LR++ K +ILA NK E+ K ++ EF++LG P+PISA+ G
Sbjct: 96 ISPTPDDDMIAQTLRRS--GKPVILAANKVENFAK--TELYEFYNLGLGEPVPISAVHGM 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEE-ENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G+LLD V S ED+ EE + IA+VGRPNVGKSS++N L+GE+R IVS
Sbjct: 152 NIGDLLDEVVSHFP-----EDIEEEVDPDTIRIAVVGRPNVGKSSLVNTLLGEERVIVSN 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRDAID+ F EG+ + +IDTAG+R++ I TE SV+R+ RA+ RSDV+
Sbjct: 207 IPGTTRDAIDSAFEH-EGKHYIIIDTAGMRRKGRIE---ELTEQYSVSRSLRAVDRSDVI 262
Query: 462 ALVIEAMACITEQ 474
++++A +TEQ
Sbjct: 263 LMLLDAGEGVTEQ 275
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
R+A+VGRPNVGKS+L N L+G R IV + PG TRD + +F EHE ++++DT G+
Sbjct: 178 RIAVVGRPNVGKSSLVNTLLGEERVIVSNIPGTTRDAI-DSAF--EHEGKHYIIIDTAGM 234
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +E+L T + +V+R + A++ S VI+ L+D
Sbjct: 235 RRKGR-----IEEL--------------TEQYSVSR--------SLRAVDRSDVILMLLD 267
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGF---SP 333
G+T D++IA + + K I+L VNK + K ++ F LGF +P
Sbjct: 268 AGEGVTEQDKKIAGYAHE--AGKGIVLVVNKWDLIEKDDKTMNRFEKDIREELGFMQYAP 325
Query: 334 -LPISAISGTGTGELLDLV 351
L ISA +G +LLDLV
Sbjct: 326 TLFISAKTGQRVTKLLDLV 344
>gi|227879096|ref|ZP_03996985.1| GTP-binding protein EngA [Lactobacillus crispatus JV-V01]
gi|256843085|ref|ZP_05548573.1| ribosome-associated GTPase EngA [Lactobacillus crispatus 125-2-CHN]
gi|256850263|ref|ZP_05555692.1| phosphoglycerate dehydrogenase [Lactobacillus crispatus MV-1A-US]
gi|262046345|ref|ZP_06019307.1| ribosome-associated GTPase EngA [Lactobacillus crispatus MV-3A-US]
gi|293379768|ref|ZP_06625900.1| ribosome-associated GTPase EngA [Lactobacillus crispatus 214-1]
gi|312977269|ref|ZP_07789017.1| ribosome-associated GTPase EngA [Lactobacillus crispatus CTV-05]
gi|423318777|ref|ZP_17296654.1| GTPase Der [Lactobacillus crispatus FB049-03]
gi|227861337|gb|EEJ68967.1| GTP-binding protein EngA [Lactobacillus crispatus JV-V01]
gi|256614505|gb|EEU19706.1| ribosome-associated GTPase EngA [Lactobacillus crispatus 125-2-CHN]
gi|256712900|gb|EEU27892.1| phosphoglycerate dehydrogenase [Lactobacillus crispatus MV-1A-US]
gi|260573216|gb|EEX29774.1| ribosome-associated GTPase EngA [Lactobacillus crispatus MV-3A-US]
gi|290923677|gb|EFE00548.1| ribosome-associated GTPase EngA [Lactobacillus crispatus 214-1]
gi|310895700|gb|EFQ44766.1| ribosome-associated GTPase EngA [Lactobacillus crispatus CTV-05]
gi|405591864|gb|EKB65323.1| GTPase Der [Lactobacillus crispatus FB049-03]
Length = 435
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 137/314 (43%), Positives = 186/314 (59%), Gaps = 43/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVG+PNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F L+DTGG
Sbjct: 2 VLPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKPGVTRDRNYAQAEWMGHKFDLIDTGG- 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
I EG ++ I QA AIEE+ VI+ L +
Sbjct: 61 -------------------ITWEG----------GKIEEEIRAQAEIAIEEADVIVMLTN 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+T DE IA L + K +ILAVNK ++P + + +F+SLG P+P+S+
Sbjct: 92 VVNHVTDLDERIAHLLYRT--KKPVILAVNKADNPEQR-SDIYDFYSLGLGDPIPVSSSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG G+LLD + ++ +D E + + + +++GRPNVGKSSI+N L+GEDR IV+
Sbjct: 149 GTGIGDLLDQIVNDF-----PDDKDTEADDVISFSVIGRPNVGKSSIVNKLLGEDRVIVA 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
GTTRDA+DT FT +G KF+++DTAGIR+R + TE SV RA AI RSDV
Sbjct: 204 NEEGTTRDAVDTPFTH-DGVKFKVVDTAGIRRRGKVYEK---TEKYSVMRAMSAIERSDV 259
Query: 461 VALVIEAMACITEQ 474
V LV++A I EQ
Sbjct: 260 VLLVLDASTGIREQ 273
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 42/206 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS++ N+L+G +R IV +E G TRD + +F +VDT G+ +
Sbjct: 178 SVIGRPNVGKSSIVNKLLGEDRVIVANEEGTTRDAVDTPFTHDGVKFKVVDTAGI----R 233
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E T + +V R A +AIE S V++ ++D G+
Sbjct: 234 RRGKVYE---------------KTEKYSVMR--------AMSAIERSDVVLLVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSP-LPIS 337
D+ +A + + + II+ VNK + P+K EF L ++P L +S
Sbjct: 271 REQDKHVAGYAHE--AGRGIIIVVNKWDLPKKNSTSAKEFEREIRDEFQYLDYAPILFVS 328
Query: 338 AISGTGTGELLDLVCSELKKVEGTED 363
A TG+ LD + + +K+V ++
Sbjct: 329 A----KTGQRLDQIPNMVKEVYDNQN 350
>gi|332663276|ref|YP_004446064.1| GTP-binding protein engA [Haliscomenobacter hydrossis DSM 1100]
gi|332332090|gb|AEE49191.1| GTP-binding protein engA [Haliscomenobacter hydrossis DSM 1100]
Length = 434
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 136/310 (43%), Positives = 189/310 (60%), Gaps = 42/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+G ++IV + GVTRDR YG S+W F +VDTGG + S
Sbjct: 5 VAIVGRPNVGKSTFFNRLIGERQSIVDNISGVTRDRQYGASYWNGKNFTVVDTGGFVPHS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EAA I Q A++E+ VIIFLVD G
Sbjct: 65 DD----------------------VFEAA-------IREQVKIAVDEASVIIFLVDVTTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
+T DEE+A+ LR++ K + L VNK ++ ++ + + +EFWSLGF + L +SA++G+G+
Sbjct: 96 ITDLDEEVANLLRRS--KKPVFLVVNKVDNGQR-LFEANEFWSLGFENTLFLSALTGSGS 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GE+LD V L ++D +E+ +P AIVG+PNVGKSS+ NAL+GEDR IV+ I+G
Sbjct: 153 GEILDAVADHL-----SDDEQPKEDSLPRFAIVGQPNVGKSSLTNALLGEDRNIVTEIAG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+ID +T + ++F L+DTAGIRK+A + + E SV RA +AI DV L+
Sbjct: 208 TTRDSIDALYTKFD-KEFILVDTAGIRKKAKVHEN---LEFYSVLRAIKAIEDCDVCILM 263
Query: 465 IEAMACITEQ 474
I+A + Q
Sbjct: 264 IDAQTGVESQ 273
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 29/153 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E LPR AIVG+PNVGKS+L N L+G +R IV + G TRD + + EF+LVDT
Sbjct: 171 EDSLPRFAIVGQPNVGKSSLTNALLGEDRNIVTEIAGTTRDSIDALYTKFDKEFILVDTA 230
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + E+L + + +A AIE+ V I +
Sbjct: 231 GI----RKKAKVHENLEFYSVL-----------------------RAIKAIEDCDVCILM 263
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
+D Q G+ + D+ I ++ +K I++ VNK
Sbjct: 264 IDAQTGVESQDQAIFRLAQRR--NKGIVILVNK 294
>gi|331081965|ref|ZP_08331093.1| GTP-binding protein engA [Lachnospiraceae bacterium 6_1_63FAA]
gi|330405560|gb|EGG85090.1| GTP-binding protein engA [Lachnospiraceae bacterium 6_1_63FAA]
Length = 441
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 134/314 (42%), Positives = 190/314 (60%), Gaps = 44/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNALAGEKISIVKDTPGVTRDRIYAEVTWLDKTFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + + +++M QA AI+ + VIIF+ D +
Sbjct: 62 ----EPE-------------------SNDVILSQM----REQAQIAIDTADVIIFMTDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD ++AD LR++ K ++L VNK +S +K +M EF++LG P+PISA S
Sbjct: 95 QGLVDADSKVADMLRRS--KKPVVLVVNKVDSFQKFMMDTYEFYNLGIGEPVPISAASML 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVE--EENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G++L+ K VE +D + EE+ IP IA+VG+PNVGKSS++N ++GEDR IVS
Sbjct: 153 GLGDMLE------KVVEHFDDDAQNDEEDEIPKIAVVGKPNVGKSSLINKILGEDRVIVS 206
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I+GTTRDAIDT+ T +G+++ IDTAG+R++ I E S+ R A+ R+DV
Sbjct: 207 NIAGTTRDAIDTKVT-YQGKEYTFIDTAGLRRKNKIKEE---LERYSIIRTVTAVERADV 262
Query: 461 VALVIEAMACITEQ 474
V ++I+A +TEQ
Sbjct: 263 VVMMIDATEGVTEQ 276
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 38/204 (18%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
N E +P++A+VG+PNVGKS+L N+++G +R IV + G TRD + + + E+ +
Sbjct: 171 NDEEDEIPKIAVVGKPNVGKSSLINKILGEDRVIVSNIAGTTRDAIDTKVTYQGKEYTFI 230
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DT G+ + + I E+L + I + A+E + V+
Sbjct: 231 DTAGL----RRKNKIKEELERYSII-----------------------RTVTAVERADVV 263
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGF 331
+ ++D G+T D +IA K +++AVNK ++ K + +F +L +
Sbjct: 264 VMMIDATEGVTEQDAKIAGIAHDR--GKGVVIAVNKWDAIEKNDKTIYKFTNKVRETLSY 321
Query: 332 SP----LPISAISGTGTGELLDLV 351
P + ISA +G +L + +
Sbjct: 322 MPYAEIMFISAHTGQRIPKLFETI 345
>gi|302670901|ref|YP_003830861.1| GTP-binding protein [Butyrivibrio proteoclasticus B316]
gi|302395374|gb|ADL34279.1| GTP-binding protein [Butyrivibrio proteoclasticus B316]
Length = 442
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 138/310 (44%), Positives = 184/310 (59%), Gaps = 40/310 (12%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS LFN L G AIV D PGVTRDR+Y W H F L+DTGG+
Sbjct: 7 VAVVGRPNVGKSTLFNALAGSRIAIVQDTPGVTRDRIYQDVEWLNHSFTLIDTGGI---- 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+P+ +++ +A+M QA AI+ + VIIF+VD + G
Sbjct: 63 --EPD-------------------SKDIILAQMRD----QAQIAIDTADVIIFMVDVKQG 97
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT +D ++AD LRK+ K I+L VNK ++ + M V EF++LG P PISA++ G
Sbjct: 98 LTDSDSKVADMLRKS--GKPIVLCVNKVDNYNRDSMDVYEFYNLGIGEPFPISAVNKQGI 155
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LL+ V S K + D EEE+ IAI+G+PNVGKSSI+N L+GE+R IVS I+G
Sbjct: 156 GDLLEEVVSHFSK--SSTD--EEEDDSVKIAIIGKPNVGKSSIINKLIGENRLIVSDIAG 211
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT G+K+ IDTAG+R++ I E + R A+ R+DV LV
Sbjct: 212 TTRDAIDTP-VKYNGKKYTFIDTAGLRRKNKIKDE---LEHYMIVRTVGAVERADVAILV 267
Query: 465 IEAMACITEQ 474
I A +TEQ
Sbjct: 268 INAEDGVTEQ 277
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+G+PNVGKS++ N+L+G NR IV D G TRD + + ++ +DT G+
Sbjct: 180 KIAIIGKPNVGKSSIINKLIGENRLIVSDIAGTTRDAIDTPVKYNGKKYTFIDTAGLRRK 239
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+K + +E I T+G A+E + V I +++ +
Sbjct: 240 NKIKDE-LEHYMIVRTVG--------------------------AVERADVAILVINAED 272
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGF----SPLP 335
G+T D +IA ++ K +I+AVNK + K V EF +L F +
Sbjct: 273 GVTEQDAKIAGIAHES--GKAVIIAVNKWDLIEKDNHSVKEFTKDIRNTLAFMNYAEIIF 330
Query: 336 ISAISGTGTGELLDLV 351
ISA +G +L D++
Sbjct: 331 ISAETGQRLVKLYDMI 346
>gi|330719101|ref|ZP_08313701.1| GTP-binding protein Der [Leuconostoc fallax KCTC 3537]
Length = 436
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 183/312 (58%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G AIV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRMAGERIAIVEDLPGVTRDRLYASADWLNYDFKIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P S I Q A+EE+ VI+ + G+
Sbjct: 62 ----------------EIGNE--PFL----------SEIRGQVEIALEEADVIVMVASGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT ADE +A L K DK ++LA+NK ++P + EF++LG P PIS G
Sbjct: 94 EGLTEADEVVAKLLYKT--DKPVVLAINKVDNPEMR-ADIYEFYALGLGDPFPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + ++ E+E+ +I+GRPNVGKSSI+NA++GE+R IVS I
Sbjct: 151 GLGDLLDEIVKHFP-----DEAAEQEDDAIRFSIIGRPNVGKSSIVNAILGEERVIVSDI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID+ F +G +F ++DTAG+RKR + + TE SV RA +A+ S+V+
Sbjct: 206 EGTTRDAIDSRFMTADGDEFVMVDTAGMRKRGKVYEN---TEKYSVLRALKAVDESNVIL 262
Query: 463 LVIEAMACITEQ 474
+VI+A A I EQ
Sbjct: 263 MVIDAEAGIREQ 274
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 41/207 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +I+GRPNVGKS++ N ++G R IV D G TRD + R + EF++VDT G+
Sbjct: 176 RFSIIGRPNVGKSSIVNAILGEERVIVSDIEGTTRDAIDSRFMTADGDEFVMVDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A A++ES VI+ ++D +
Sbjct: 236 RGKVYEN-------------------TEKYSVLR--------ALKAVDESNVILMVIDAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLP 335
AG+ D+ +A + + + +I+ VNK ++ K + +EF L ++P+
Sbjct: 269 AGIREQDKHVAGFAHE--AGRSMIIVVNKWDAIDKNTKTMQEFEETIRTEFKFLDYAPI- 325
Query: 336 ISAISGTGTGELLDLVCSELKKVEGTE 362
TG+ LD + +K V+
Sbjct: 326 --VFVSAKTGQRLDRLPQLIKDVDANH 350
>gi|399926843|ref|ZP_10784201.1| GTP-binding protein Der [Myroides injenensis M09-0166]
Length = 437
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 140/310 (45%), Positives = 181/310 (58%), Gaps = 39/310 (12%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W EF ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRRDAIVDSVSGVTRDRNYGKSEWNGREFSVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K +I E I RQ + AI+E+ VI+F+VD + G
Sbjct: 62 KGSDDIFE--------------------------GEIRRQVSLAIDEADVIVFVVDVEEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T DEE+A LRK K I +AVNK +S ++ + EF++LG + PI+ ISG+GT
Sbjct: 96 ITPMDEEVARLLRKE--KKPIFVAVNKVDSAKR-MDDCYEFYNLGLGEIFPIAGISGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V L E D EE+ +P A+VGRPN GKSS +NAL+GEDR IV+ I+G
Sbjct: 153 GDLLDAVVQALPPEEERGD--SEEDELPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAG 210
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+IDT FT G F L+DTAGIR++A + E SV R+ RAI SDV L+
Sbjct: 211 TTRDSIDTRFT-QFGFDFNLVDTAGIRRKAKVKED---LEFYSVMRSIRAIEHSDVCILM 266
Query: 465 IEAMACITEQ 474
++A Q
Sbjct: 267 VDATRGFESQ 276
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 80/172 (46%), Gaps = 31/172 (18%)
Query: 156 GNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFML 215
G+ E LPR A+VGRPN GKS+ N L+G +R IV D G TRD + R +F L
Sbjct: 170 GDSEEDELPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDSIDTRFTQFGFDFNL 229
Query: 216 VDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCV 275
VDT G+ + + + EDL + + ++ AIE S V
Sbjct: 230 VDTAGI----RRKAKVKEDLEFYSVM-----------------------RSIRAIEHSDV 262
Query: 276 IIFLVDGQAGLTAADEEIADWL-RKNYMDKFIILAVNKCESPRKGIMQVSEF 326
I +VD G + D+ I WL KN K I++ VNK + K M +F
Sbjct: 263 CILMVDATRGFESQDQNIF-WLAEKN--RKGIVILVNKWDLVDKDTMTSKQF 311
>gi|423321586|ref|ZP_17299457.1| GTPase Der [Lactobacillus crispatus FB077-07]
gi|405594275|gb|EKB67692.1| GTPase Der [Lactobacillus crispatus FB077-07]
Length = 435
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/314 (43%), Positives = 186/314 (59%), Gaps = 43/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVG+PNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F L+DTGG
Sbjct: 2 VLPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKPGVTRDRNYAQAEWMGHKFDLIDTGG- 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
I EG ++ I QA AIEE+ VI+ L +
Sbjct: 61 -------------------ITWEG----------GKIEEEIRAQAEIAIEEADVIVMLTN 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+T DE IA L + K +ILAVNK ++P + + +F+SLG P+P+S+
Sbjct: 92 VVNHVTDLDERIAHLLYRT--KKPVILAVNKADNPEQR-SDIYDFYSLGLGDPIPVSSSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG G+LLD + ++ +D E + + + +++GRPNVGKSSI+N L+GEDR IV+
Sbjct: 149 GTGIGDLLDQIVNDF-----PDDKDTEADDVISFSVIGRPNVGKSSIVNKLLGEDRVIVA 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
GTTRDA+DT FT +G KF+++DTAGIR+R + TE SV RA AI RSDV
Sbjct: 204 NEEGTTRDAVDTPFTH-DGVKFKVVDTAGIRRRGKVYEK---TEKYSVMRAMSAIERSDV 259
Query: 461 VALVIEAMACITEQ 474
V LV++A I EQ
Sbjct: 260 VFLVLDASTGIREQ 273
>gi|392529404|ref|ZP_10276541.1| GTP-binding protein Der [Carnobacterium maltaromaticum ATCC 35586]
gi|414083664|ref|YP_006992372.1| ribosome-associated GTPase EngA [Carnobacterium maltaromaticum
LMA28]
gi|412997248|emb|CCO11057.1| ribosome-associated GTPase EngA [Carnobacterium maltaromaticum
LMA28]
Length = 437
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 186/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D GVTRDR+Y W EF ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERISIVEDVSGVTRDRIYADGEWLGKEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I++QA A++E+ VIIF+ G+
Sbjct: 62 ----------------DIGDE--PFLEQ----------IKQQAEIAMDEADVIIFITSGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+T ADE +A L + K ++LAVNK ++P V +F+SLG P PIS G
Sbjct: 94 ESVTDADENVAKMLYRT--KKPVLLAVNKIDNPEMR-NDVFDFYSLGLGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD E TE+ E ++ + +++GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GLGDLLDAAIGHFP--EETEE--EYDDSVIKFSLIGRPNVGKSSLVNAILGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTEF +G +F +IDTAG+RKR + TTE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAIDTEFVSADGTEFVMIDTAGMRKRGKVY---ETTEKYSVLRALRAIERSDVVL 263
Query: 463 LVIEAMACITEQ 474
+V++A I EQ
Sbjct: 264 VVLDAETGIREQ 275
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 37/180 (20%)
Query: 155 IGNVPEHL-------LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSF 207
IG+ PE + + +++GRPNVGKS+L N ++G R IV D G TRD +
Sbjct: 160 IGHFPEETEEEYDDSVIKFSLIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAIDTEFV 219
Query: 208 WGE-HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQA 266
+ EF+++DT G+ + + + E T + +V R A
Sbjct: 220 SADGTEFVMIDTAGM----RKRGKVYE---------------TTEKYSVLR--------A 252
Query: 267 TAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
AIE S V++ ++D + G+ D+++A + + + II+ VNK ++ K + +F
Sbjct: 253 LRAIERSDVVLVVLDAETGIREQDKKVAGYAHE--AGRGIIIVVNKWDTLEKDNSTMKKF 310
>gi|373856644|ref|ZP_09599388.1| ribosome-associated GTPase EngA [Bacillus sp. 1NLA3E]
gi|372453623|gb|EHP27090.1| ribosome-associated GTPase EngA [Bacillus sp. 1NLA3E]
Length = 436
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 191/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W H+F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERISIVEDIPGVTRDRIYSSAEWLTHDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I QA AI+E+ VII + +G+
Sbjct: 62 ----------------DIGDE--PFLEQ----------IRLQAEIAIDEADVIILITNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ K ++LAVNK ++P Q+ +F+SLGF P+ IS G
Sbjct: 94 EGVTAADEEVAKILYRS--KKPVVLAVNKVDNPEMR-EQIYDFYSLGFGEPIAISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD E K + + ++ I +++GRPNVGKSS++NA++GEDR IVS I
Sbjct: 151 GLGDLLD----EAAKHFPNKKDKDYDDDIIKFSLIGRPNVGKSSLVNAILGEDRVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAID+ T GQ++ +IDTAG+RK+ + S TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAIDSGLT-YNGQRYMIIDTAGMRKKGKVYES---TEKYSVLRALRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V++A I EQ
Sbjct: 263 VVLDAEEGIIEQ 274
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 29/160 (18%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS+L N ++G +R IV D G TRD + + +M++DT G+ +
Sbjct: 179 SLIGRPNVGKSSLVNAILGEDRVIVSDIAGTTRDAIDSGLTYNGQRYMIIDTAGM----R 234
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E +T + +V R A AIE S V++ ++D + G+
Sbjct: 235 KKGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVVLDAEEGI 271
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
D+++A + + + +++ VNK ++ K + EF
Sbjct: 272 IEQDKKVAGYAHE--AGRAVVIVVNKWDAVEKDEKTMKEF 309
>gi|260588686|ref|ZP_05854599.1| ribosome-associated GTPase EngA [Blautia hansenii DSM 20583]
gi|260541161|gb|EEX21730.1| ribosome-associated GTPase EngA [Blautia hansenii DSM 20583]
Length = 441
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/314 (42%), Positives = 190/314 (60%), Gaps = 44/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNALAGEKISIVKDTPGVTRDRIYAEVTWLDKTFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + + +++M QA AI+ + VIIF+ D +
Sbjct: 62 ----EPE-------------------SNDVILSQM----REQAQIAIDTADVIIFMTDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD ++AD LR++ K ++L VNK +S +K +M EF++LG P+PISA S
Sbjct: 95 QGLVDADSKVADMLRRS--KKPVVLVVNKVDSFQKFMMDTYEFYNLGIGEPVPISAASML 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVE--EENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G++L+ K VE +D + EE+ IP IA+VG+PNVGKSS++N ++GEDR IVS
Sbjct: 153 GLGDMLE------KVVEHFDDDAQNDEEDEIPKIAVVGKPNVGKSSLINKILGEDRVIVS 206
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I+GTTRDAIDT+ T +G+++ IDTAG+R++ I E S+ R A+ R+DV
Sbjct: 207 NIAGTTRDAIDTKVT-YQGKEYTFIDTAGLRRKNKIKEE---LERYSIIRTVTAVERADV 262
Query: 461 VALVIEAMACITEQ 474
V ++I+A +TEQ
Sbjct: 263 VVMMIDATEGVTEQ 276
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 38/204 (18%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
N E +P++A+VG+PNVGKS+L N+++G +R IV + G TRD + + + E+ +
Sbjct: 171 NDEEDEIPKIAVVGKPNVGKSSLINKILGEDRVIVSNIAGTTRDAIDTKVTYQGKEYTFI 230
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DT G+ + + I E+L + I + A+E + V+
Sbjct: 231 DTAGL----RRKNKIKEELERYSII-----------------------RTVTAVERADVV 263
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGF 331
+ ++D G+T D +IA K +++AVNK ++ K + +F +L +
Sbjct: 264 VMMIDATEGVTEQDAKIAGIAHDR--GKGVVIAVNKWDAIEKNDKTIYKFTNKVRETLSY 321
Query: 332 SP----LPISAISGTGTGELLDLV 351
P + ISA +G L + +
Sbjct: 322 MPYAEIMFISAHTGQRIPNLFETI 345
>gi|222151373|ref|YP_002560529.1| GTP-binding protein EngA [Macrococcus caseolyticus JCSC5402]
gi|254783159|sp|B9E6L5.1|DER_MACCJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|222120498|dbj|BAH17833.1| GTP-binding protein EngA [Macrococcus caseolyticus JCSC5402]
Length = 436
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 184/312 (58%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGR NVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PTIAIVGRANVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E I QA AIEE+ VIIF+V+G+
Sbjct: 62 ----------------------------ELGDEPFQEQIRAQAEIAIEEADVIIFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T D+ +A L K+ K ++L VNK ++P + EF+SLGF P PIS G
Sbjct: 94 DGITNEDDFVAKLLFKS--SKPVVLGVNKIDNPEMR-ADIYEFYSLGFGEPFPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + + ED ++ + +++GRPNVGKSS++NA++GE+R IVSP+
Sbjct: 151 GIGDLLDEAAKHFPE-QQEEDY---DDDVIKFSLIGRPNVGKSSLINAILGEERVIVSPV 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT +T E Q++ +IDTAG+RK+ + + TE SV RA +AI RS+VV
Sbjct: 207 AGTTRDAIDTVYTF-ENQEYVMIDTAGMRKKGKVYEA---TERYSVLRALKAIERSNVVL 262
Query: 463 LVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 263 VVIDAEEGIIEQ 274
>gi|257869556|ref|ZP_05649209.1| GTP-binding protein engA [Enterococcus gallinarum EG2]
gi|257803720|gb|EEV32542.1| GTP-binding protein engA [Enterococcus gallinarum EG2]
Length = 436
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 184/314 (58%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYATGEWLGREFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
+G E P M I+ QA AI+E+ VI+F+
Sbjct: 62 ----------------DLGDE--------------PFMDQIKHQAEIAIDEADVIVFITS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+ G+T ADE +A L K+ +K +ILAVNK ++P + EF++LG P PIS
Sbjct: 92 AREGVTDADELVARLLYKS--NKPVILAVNKVDNPEMR-ADIYEFYTLGLGDPYPISGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD TE+ EE+ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGIGDVLDEAVKHF-----TEEAEEEDESIIKFSLIGRPNVGKSSLINAILGEERVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT FT GQ+F +IDTAG+RK+ + S TE SV RA RAI RSDV
Sbjct: 204 DIEGTTRDAIDTHFTSENGQEFTMIDTAGMRKKGKVYES---TEKYSVMRAMRAIERSDV 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 40/180 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH--EFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R IV D G TRD + F E+ EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIVSDIEGTTRDAI-DTHFTSENGQEFTMIDTAGM- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + E +T + +V R A AIE S V++ +++
Sbjct: 234 ---RKKGKVYE---------------STEKYSVMR--------AMRAIERSDVVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ IA + + + IIL VNK + +K + EF L ++P+
Sbjct: 268 EEGIREQDKRIAGYAHE--AGRGIILVVNKWDLLKKETNTMRDFEAEIRDEFQYLDYAPI 325
>gi|342214776|ref|ZP_08707449.1| ribosome-associated GTPase EngA [Veillonella sp. oral taxon 780
str. F0422]
gi|341590599|gb|EGS33836.1| ribosome-associated GTPase EngA [Veillonella sp. oral taxon 780
str. F0422]
Length = 444
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 193/312 (61%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W + EF ++DTGG+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLQREFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E I + E +P M+ QA AIEE+ VI+F+VDG+
Sbjct: 62 --------------------EFITAESHE-----IPKMMRFQAQLAIEEADVILFVVDGK 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADEE+A+ LR + K +IL VNK +S + + EF++LG P+ ISA +
Sbjct: 97 QGITIADEEVANLLRAS--GKPVILVVNKIDSVNQE-ANIYEFYNLGIGDPIGISAKNLM 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V +E E+E+ I +A++GRPNVGKSS+ NAL+G++R IVS +
Sbjct: 154 NLGDLLDDVVKHFPPQSASE---EDEDTI-HVALIGRPNVGKSSLTNALLGQERVIVSDV 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+IDT ++ +GQ F LIDTAG+R+++ I + E S+ R+ RAI RSD+V
Sbjct: 210 AGTTRDSIDTHWSH-DGQDFVLIDTAGMRRKSRI---DAPVERYSIVRSLRAIDRSDIVV 265
Query: 463 LVIEAMACITEQ 474
LV++A +TEQ
Sbjct: 266 LVLDATDGVTEQ 277
>gi|302874737|ref|YP_003843370.1| ribosome-associated GTPase EngA [Clostridium cellulovorans 743B]
gi|307690648|ref|ZP_07633094.1| GTP-binding protein EngA [Clostridium cellulovorans 743B]
gi|302577594|gb|ADL51606.1| ribosome-associated GTPase EngA [Clostridium cellulovorans 743B]
Length = 438
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 138/315 (43%), Positives = 190/315 (60%), Gaps = 47/315 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D+PGVTRDR+Y S W EF ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVEDKPGVTRDRIYASSEWVGQEFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + + +A+M RQA AIE + VIIF+VDG+
Sbjct: 62 ----EPK-------------------SDDIILAQM----RRQALIAIETANVIIFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+GLT D E+A LRK+ K I+LAVNK +S ++ + EF++LG P+ ISA G
Sbjct: 95 SGLTDTDREVAQMLRKS--KKSIVLAVNKVDSIKEEENKF-EFYNLGLGDPVAISASQGL 151
Query: 343 GTGELLDLVCSELKKV---EGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G G++LD+V K + E +E+ ++ IA++G+PNVGKSS++N L+GE+R IV
Sbjct: 152 GLGDMLDMVVDNFKDISNDEASEEYIK-------IAMIGKPNVGKSSLINKLLGEERNIV 204
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S I GTTRDAID+ G KF LIDTAG+R+++ + E SV R AI R+D
Sbjct: 205 SNIPGTTRDAIDSPLETEIG-KFMLIDTAGLRRKSKVKEE---IERYSVIRTLTAIERAD 260
Query: 460 VVALVIEAMACITEQ 474
V L+++A ++EQ
Sbjct: 261 VCILMLDATEELSEQ 275
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L N+L+G R IV + PG TRD + +FML+DT G+
Sbjct: 178 KIAMIGKPNVGKSSLINKLLGEERNIVSNIPGTTRDAIDSPLETEIGKFMLIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I E ++ T+ AIE + V I ++D
Sbjct: 238 SKVKEEI-ERYSVIRTL--------------------------TAIERADVCILMLDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
L+ DE+I + + ++K I++ VNK + K + +F + ++P L
Sbjct: 271 ELSEQDEKIIGYAHE--LNKAIMVIVNKWDLIEKDDKTMKKFTDDLRFKLSFMNYAPYLF 328
Query: 336 ISAISGTGTGELLDL 350
ISA+SG ++L+L
Sbjct: 329 ISALSGQRVHKVLEL 343
>gi|254431747|ref|ZP_05045450.1| GTP-binding protein EngA [Cyanobium sp. PCC 7001]
gi|197626200|gb|EDY38759.1| GTP-binding protein EngA [Cyanobium sp. PCC 7001]
Length = 441
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/305 (46%), Positives = 180/305 (59%), Gaps = 47/305 (15%)
Query: 174 VGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL--NVSKSQPNI 231
+GKS L NRL AIV D+PGVTRDR Y FWG+ F +VDTGG++ + S+ P I
Sbjct: 1 MGKSTLVNRLCRSREAIVHDQPGVTRDRTYQEGFWGDRTFRVVDTGGLVFDDDSEFLPEI 60
Query: 232 MEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADE 291
E QA A+ E+ V + +VDGQ G TAADE
Sbjct: 61 RE-------------------------------QANLALAEASVALVIVDGQQGCTAADE 89
Query: 292 EIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDL 350
IA WLR + ++LAVNKCESP G+ +EFW LG P PISAI G GTG+LLD
Sbjct: 90 AIAAWLRGQNVP--VLLAVNKCESPEAGLAMAAEFWGLGLGEPHPISAIHGAGTGDLLDQ 147
Query: 351 VCSELKKVEGTEDLVEEENRIP-AIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDA 409
V L + +EE P +AI+GRPNVGKSS+LNA+ GE+R IVSPI GTTRD
Sbjct: 148 VIGHLPPTQ------DEEGEEPIQLAIIGRPNVGKSSLLNAVCGENRAIVSPIRGTTRDT 201
Query: 410 IDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMA 469
IDT EG+ ++L+DTAGIR+R ++ E +NR+F+AI RSDV LVI+A+
Sbjct: 202 IDTTIE-REGKTWKLLDTAGIRRRRSVNYG---PEFFGINRSFKAIERSDVCVLVIDALD 257
Query: 470 CITEQ 474
+TEQ
Sbjct: 258 GVTEQ 262
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N + G NRAIV G TRD + + L+DT G+
Sbjct: 165 QLAIIGRPNVGKSSLLNAVCGENRAIVSPIRGTTRDTIDTTIEREGKTWKLLDTAGI--- 221
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AIE S V + ++D
Sbjct: 222 -------------------------RRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDAL 256
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + ++ + ++ VNK ++ K
Sbjct: 257 DGVTEQDQRLAGRIEED--GRACVVVVNKWDAIEK 289
>gi|297617642|ref|YP_003702801.1| ribosome-associated GTPase EngA [Syntrophothermus lipocalidus DSM
12680]
gi|297145479|gb|ADI02236.1| ribosome-associated GTPase EngA [Syntrophothermus lipocalidus DSM
12680]
Length = 442
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/311 (45%), Positives = 190/311 (61%), Gaps = 43/311 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS LFNR+ G +AIV D PGVTRDR+Y ++ W EF++VDTGG+
Sbjct: 6 VALVGRPNVGKSTLFNRMAGLRKAIVEDTPGVTRDRIYEQAEWAGREFIVVDTGGIRF-- 63
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EG LA +++Q+ AIEE+ VI+ +VD + G
Sbjct: 64 -----------------EEGDILAPE----------VKKQSELAIEEADVIVMVVDAREG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE +A LR+ +K ++LA NK E +K + + +F+ LG P+P+SAI G T
Sbjct: 97 VTPEDEMVAGILRR--ANKPVVLAANKVEDFKKHLGYL-DFYRLGLGEPIPVSAIHGMNT 153
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPA-IAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
ELLD V + L E EE++ + IA+VGRPNVGKSS+LN L+GE+R IVS I
Sbjct: 154 DELLDAVIALLPPAEE-----EEKDELAVRIALVGRPNVGKSSLLNRLIGEERVIVSEIP 208
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRDAIDT F G ++ LIDTAGIR+++ I TE SV RA RA+ RSDVV +
Sbjct: 209 GTTRDAIDTPFRYG-GNRYVLIDTAGIRRKSRIKEP---TERYSVLRALRAVERSDVVLI 264
Query: 464 VIEAMACITEQ 474
+++A +TEQ
Sbjct: 265 ILDATERVTEQ 275
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 99/201 (49%), Gaps = 38/201 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
+ L R+A+VGRPNVGKS+L NRL+G R IV + PG TRD + +G + ++L+DT
Sbjct: 173 DELAVRIALVGRPNVGKSSLLNRLIGEERVIVSEIPGTTRDAIDTPFRYGGNRYVLIDTA 232
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ S+ I T +V R A A+E S V++ +
Sbjct: 233 GIRRKSR-------------------IKEPTERYSVLR--------ALRAVERSDVVLII 265
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF--------WSLGF 331
+D +T D++IA ++ + II VNK + +K + EF L +
Sbjct: 266 LDATERVTEQDKKIAGFVHEAGKSNIII--VNKWDLVKKTERTMKEFDDLIREELKFLAY 323
Query: 332 SP-LPISAISGTGTGELLDLV 351
SP L ISA++G +++++V
Sbjct: 324 SPILYISALTGQRVKQVIEVV 344
>gi|150016018|ref|YP_001308272.1| GTP-binding protein EngA [Clostridium beijerinckii NCIMB 8052]
gi|189037141|sp|A6LSI6.1|DER_CLOB8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|149902483|gb|ABR33316.1| small GTP-binding protein [Clostridium beijerinckii NCIMB 8052]
Length = 438
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 184/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAEAEWLRYNFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P D+ I + RQA AIE + VIIF+VDG+
Sbjct: 62 ----EPE-NNDIII----------------------KQMRRQANIAIETADVIIFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD E+A LRK+ K ++L VNK ++ K EF++LG P+ ISA G
Sbjct: 95 EGLTAADNEVATMLRKS--KKPVVLVVNKVDNL-KDENNAYEFYNLGIGDPMAISAGQGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V K D EE++ IA++G+PNVGKSS++N L+GE+R IVS I
Sbjct: 152 GLGDMLDEVVKHFDK--SIYD--EEDDEYIRIAMIGKPNVGKSSLINKLLGEERVIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD+ID+ EG KF L+DTAG+R+++ + E SV R + AI R+DV
Sbjct: 208 PGTTRDSIDSHLETEEG-KFILVDTAGLRRKSKVKEE---IERYSVIRTYAAIERADVCI 263
Query: 463 LVIEAMACITEQ 474
L+I+A ITEQ
Sbjct: 264 LMIDATEGITEQ 275
>gi|315038199|ref|YP_004031767.1| GTP-binding protein EngA [Lactobacillus amylovorus GRL 1112]
gi|325956651|ref|YP_004292063.1| GTP-binding protein Der [Lactobacillus acidophilus 30SC]
gi|385817538|ref|YP_005853928.1| GTP-binding protein Der [Lactobacillus amylovorus GRL1118]
gi|312276332|gb|ADQ58972.1| GTP-binding protein EngA [Lactobacillus amylovorus GRL 1112]
gi|325333216|gb|ADZ07124.1| GTP-binding protein Der [Lactobacillus acidophilus 30SC]
gi|327183476|gb|AEA31923.1| GTP-binding protein Der [Lactobacillus amylovorus GRL1118]
Length = 435
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/313 (43%), Positives = 182/313 (58%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F L+DTGG
Sbjct: 3 LPVVAIVGRPNVGKSTLFNRIINQRLAIVEDKPGVTRDRNYAQAEWMGHKFDLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I EG ++ I QA AIEE+ VI+ L
Sbjct: 61 ------------------ITWEG----------GKIEEEIRAQAEIAIEEADVIVMLTSV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE +A L + K +ILAVNK ++P + + +F+SLG P+P+S+ G
Sbjct: 93 VNHMTDLDERVAHLLYRT--QKPVILAVNKADNPEQR-NDIYDFYSLGLGDPIPVSSSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + + ED + + + +++GRPNVGKSSI+N L+GEDR IV+
Sbjct: 150 TGIGDLLDAIVDKF-----PEDKDTQAEDVISFSVIGRPNVGKSSIVNKLLGEDRVIVAN 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
GTTRDA+DT FT +G KF+++DTAGIR+R + TE SV RA AI RSDVV
Sbjct: 205 EEGTTRDAVDTPFT-KDGVKFKVVDTAGIRRRGKVYEK---TEKYSVLRAMSAIERSDVV 260
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 261 LLVLDASTGIREQ 273
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 42/206 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS++ N+L+G +R IV +E G TRD + +F +VDT G+ +
Sbjct: 178 SVIGRPNVGKSSIVNKLLGEDRVIVANEEGTTRDAVDTPFTKDGVKFKVVDTAGI----R 233
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E T + +V R A +AIE S V++ ++D G+
Sbjct: 234 RRGKVYE---------------KTEKYSVLR--------AMSAIERSDVVLLVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSP-LPIS 337
D+ +A + + + II+ VNK + P+K EF L ++P L +S
Sbjct: 271 REQDKHVAGYAHE--AGRGIIIVVNKWDLPKKNSTSAKEFEREIKEEFQYLDYAPILFVS 328
Query: 338 AISGTGTGELLDLVCSELKKVEGTED 363
A TG+ LD + S +K+V ++
Sbjct: 329 A----KTGQRLDQIPSMVKEVYDNQN 350
>gi|334341454|ref|YP_004546434.1| ribosome-associated GTPase EngA [Desulfotomaculum ruminis DSM 2154]
gi|334092808|gb|AEG61148.1| ribosome-associated GTPase EngA [Desulfotomaculum ruminis DSM 2154]
Length = 440
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/316 (43%), Positives = 186/316 (58%), Gaps = 49/316 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS+LFNR+VG AIV D PGVTRDR+Y + W EF LVDTGG+
Sbjct: 4 PIVAIVGRPNVGKSSLFNRIVGARIAIVEDMPGVTRDRLYQDAEWQGREFTLVDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ ED+ + + I +QA AI+E+ I+FLVD +
Sbjct: 62 ------DFAEDV----------------------ITAQIRKQAELAIKEADAILFLVDAR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT+ D+E+A LR+ DK ++L NK E + + +F+ LG P+P+SA G
Sbjct: 94 EGLTSIDQEVAGVLRRT--DKPVLLVANKVEQFDQSKISYFDFYQLGLGDPIPVSAAEGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPA----IAIVGRPNVGKSSILNALVGEDRTI 398
TG+LLD + + L + +E+ P IA++GRPNVGKSS++NA++GE+R I
Sbjct: 152 NTGDLLDQLITLLPQ--------PDEDPYPPDTIRIAVIGRPNVGKSSLVNAILGEERVI 203
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VS I GTTRDAIDT F G+ + +IDTAG+R+R I TE SV RA RA+ R
Sbjct: 204 VSSIPGTTRDAIDTPFER-GGKNYVIIDTAGMRRRKKI---DLPTERYSVVRALRAVDRC 259
Query: 459 DVVALVIEAMACITEQ 474
DV ++I+A + EQ
Sbjct: 260 DVTLMLIDATEGVAEQ 275
>gi|197294798|ref|YP_001799339.1| GTP-binding protein EngA [Candidatus Phytoplasma australiense]
gi|171854125|emb|CAM12114.1| GTP-binding protein [Candidatus Phytoplasma australiense]
Length = 439
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/317 (40%), Positives = 187/317 (58%), Gaps = 45/317 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P++AIVGRPNVGKS+LFNRL+G +AI + G+TRDR+Y ++ W F ++DTGG
Sbjct: 1 MPKIAIVGRPNVGKSSLFNRLIGKRQAITHHKEGITRDRIYAQANWLTRTFDVIDTGG-- 58
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + IP + I++QA AI+E+ VIIF+VDG
Sbjct: 59 ------------------IEFQAIPFLEQ----------IKQQAQLAIDEADVIIFVVDG 90
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
+ GLT +D +A L + K ++L VNK ++ + + EF++LGF +PLP+SA+ G
Sbjct: 91 KTGLTQSDHYLAKILYQT--KKKVLLVVNKIDN-HDLLSNIYEFYALGFDAPLPVSALHG 147
Query: 342 TGTGELLDLVCSELK----KVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRT 397
G G+LLD + L ++ TE+ E + + I+GRPNVGKS++ N+L+ R
Sbjct: 148 VGVGDLLDKIIFHLDFSKPSLQATEN---ETDNVIKFCIIGRPNVGKSTLTNSLLFSQRM 204
Query: 398 IVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRR 457
+VS I+GTT DAIDT F EGQK+++IDTAGI+KR I + SV RA + +
Sbjct: 205 VVSDIAGTTTDAIDTFFIN-EGQKYQIIDTAGIKKRGKIYEQ---EDKYSVLRALQTLAN 260
Query: 458 SDVVALVIEAMACITEQ 474
D+ LVI+A A I EQ
Sbjct: 261 CDIACLVIDAQAGILEQ 277
>gi|385826004|ref|YP_005862346.1| putative GTP-binding protein EngA [Lactobacillus johnsonii DPC
6026]
gi|329667448|gb|AEB93396.1| putative GTP-binding protein EngA [Lactobacillus johnsonii DPC
6026]
Length = 435
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/313 (43%), Positives = 184/313 (58%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+ GVTRDR+Y R+ W HEF+L+DTGG
Sbjct: 3 LPVVALVGRPNVGKSTIFNRIINSRVAIVEDKAGVTRDRIYARAEWMGHEFILIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I L + E + I+ QA AI+E+ VI+ L D
Sbjct: 61 -----------------------ITLDSGE-----IEEQIKAQAEIAIDEADVIVMLGDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K +ILA+NK ++P + + +F+SLG P+P+S G
Sbjct: 93 TQHMTNMDETIAKMLYRT--KKPVILAINKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + E G + E++ I +++GRPNVGKSS++NA++GE R IVS
Sbjct: 150 TGMGDLLDAIVGEF----GDKANQHEDDSI-RFSVIGRPNVGKSSLVNAILGEQRVIVSN 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRDAIDT FT +GQK+ ++DTAGIR+R + TE SV RA AI SD+
Sbjct: 205 IEGTTRDAIDTTFTN-DGQKYTIVDTAGIRRRGKVYEK---TEKYSVLRAISAIEESDIT 260
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 261 LLVLDASTGIREQ 273
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N ++G R IV + G TRD + ++ +VDT G+
Sbjct: 176 RFSVIGRPNVGKSSLVNAILGEQRVIVSNIEGTTRDAIDTTFTNDGQKYTIVDTAGI--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A +AIEES + + ++D
Sbjct: 233 -RRRGKVYE---------------KTEKYSVLR--------AISAIEESDITLLVLDAST 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP- 335
G+ D+ +A + + +I+ VNK + P+K + EF L ++P+
Sbjct: 269 GIREQDKHVAGYAHD--AGRGVIIVVNKWDLPKKDSRSMKDFEDTIRREFQYLDYAPIIF 326
Query: 336 ISAISGTGTGELLDLVC----SELKKVEGT--EDLVEEENRIPAIAIV 377
+SA +G ++L LV ++ ++++ + DL+ E RI +V
Sbjct: 327 VSAKTGQRVPDILKLVKEVHENQTRRIQSSVLNDLLLEATRITPTPLV 374
>gi|291543597|emb|CBL16706.1| ribosome-associated GTPase EngA [Ruminococcus champanellensis
18P13]
Length = 442
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/313 (42%), Positives = 189/313 (60%), Gaps = 40/313 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS LFN+L+G +IV D PGVTRDR+Y + W EFM+VDTGG+
Sbjct: 3 LPIVAVVGRPNVGKSTLFNKLIGQRLSIVEDTPGVTRDRIYSKCEWRGREFMVVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+P+ T + +A+M RQA AI + VI+ + D
Sbjct: 62 -----EPD-------------------TDDVILAQM----RRQAEVAIHRADVIVLVTDV 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+TA D +AD L+K+ K ++LAVNKC++ + +++ EF++LG P PIS+ G
Sbjct: 94 RCGVTANDYAVADMLQKS--GKPVVLAVNKCDTIGEPPLELYEFYNLGIGEPFPISSQHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L + + ED E+ +A++G+PN GKSS++N + GE+R IVS
Sbjct: 152 HGTGDMLDEILKYLPETDA-EDYDED---CIKVAVIGKPNAGKSSLINKIAGEERVIVSD 207
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDA DT +G KF IDTAGIRK++ I E SV RA+ A+ R+DV
Sbjct: 208 IAGTTRDATDTVVENEQG-KFVFIDTAGIRKKSRITER---VEHFSVLRAYMAVDRADVC 263
Query: 462 ALVIEAMACITEQ 474
++I+A TEQ
Sbjct: 264 IIMIDAQTGFTEQ 276
>gi|269797893|ref|YP_003311793.1| small GTP-binding protein [Veillonella parvula DSM 2008]
gi|269094522|gb|ACZ24513.1| small GTP-binding protein [Veillonella parvula DSM 2008]
Length = 444
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 192/312 (61%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W EF ++DTG
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTG---- 59
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
GI T + V +P M+ QA AIEE+ VI+F+VDG+
Sbjct: 60 ---------------------GIEFITENSHV--IPKMMRLQAELAIEEADVILFVVDGK 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ ADEE+A+ LR + K I+L VNK +S + + EF++LG P+ ISA +
Sbjct: 97 QGIVPADEEVANILRAS--GKPIVLVVNKIDSVNQE-PNIYEFYNLGLGDPIGISAKNLM 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V GT V++E+ I +A++GRPNVGKSS+ NAL+G+DR IVS +
Sbjct: 154 NLGDLLDDTVKHFPPV-GTN--VDDEDTI-HVAVIGRPNVGKSSLTNALLGQDRVIVSDV 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+IDT +T EGQKF LIDTAG+R+++ I + E S+ R+ R++ R+D+V
Sbjct: 210 AGTTRDSIDTYWTH-EGQKFVLIDTAGMRRKSKIEEA---VERYSIVRSLRSVDRADIVV 265
Query: 463 LVIEAMACITEQ 474
LV++A +TEQ
Sbjct: 266 LVLDAQDGVTEQ 277
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 33/164 (20%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFM 214
NV + VA++GRPNVGKS+L N L+G +R IV D G TRD + ++W +F+
Sbjct: 172 NVDDEDTIHVAVIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSI--DTYWTHEGQKFV 229
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ SK E AV R + ++ +++ +
Sbjct: 230 LIDTAGMRRKSKI------------------------EEAVERYSIV---RSLRSVDRAD 262
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
+++ ++D Q G+T D++IA + + K +++ VNK + +K
Sbjct: 263 IVVLVLDAQDGVTEQDKKIAGYAYE--AGKGVVIVVNKWDLVKK 304
>gi|225871164|ref|YP_002747111.1| GTP-binding protein EngA [Streptococcus equi subsp. equi 4047]
gi|225700568|emb|CAW95070.1| GTP-binding protein EngA [Streptococcus equi subsp. equi 4047]
Length = 446
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/307 (42%), Positives = 183/307 (59%), Gaps = 42/307 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 12 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRQFSLIDTGGI 71
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A++E+ VI+F+V
Sbjct: 72 DDVD------------------------------APFMEQIKHQAHIAMDEADVIVFVVS 101
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P+S++
Sbjct: 102 GKEGVTDADEYVSKLLYRT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDSFPVSSVH 158
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E+ VE ++ I +++GRPNVGKSS++NA++GE+R I S
Sbjct: 159 GIGTGDVLDAIIDNLP----IEEPVENDDVI-RFSLIGRPNVGKSSLINAILGEERVIAS 213
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT GQ + +IDTAG+RK + + TE SV RA RAI RSD+
Sbjct: 214 PVAGTTRDAIDTSFTDESGQAYTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDI 270
Query: 461 VALVIEA 467
V +VI A
Sbjct: 271 VLMVINA 277
>gi|399053691|ref|ZP_10742490.1| ribosome-associated GTPase EngA [Brevibacillus sp. CF112]
gi|433544583|ref|ZP_20500963.1| GTP-binding protein EngA [Brevibacillus agri BAB-2500]
gi|398048468|gb|EJL40940.1| ribosome-associated GTPase EngA [Brevibacillus sp. CF112]
gi|432184162|gb|ELK41683.1| GTP-binding protein EngA [Brevibacillus agri BAB-2500]
Length = 437
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 180/313 (57%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNRLVG AIV D PGVTRDR+YG+ W H F ++DTGG
Sbjct: 3 LPVVAIVGRPNVGKSTIFNRLVGERIAIVEDMPGVTRDRLYGKGEWLTHTFHVIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + + +M QA AI+E+ VII + D
Sbjct: 61 -----------------------IEFGETDEILTQM----RYQAELAIDEANVIIMIADS 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T AD E+A L N K ++LAVNK ++P + +F+SLG P PIS G
Sbjct: 94 RTGVTDADVELARML--NRTGKPVVLAVNKADNPDMR-ADIYDFYSLGLGEPFPISGSHG 150
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G G++L+ V ED E + + ++I+GRPNVGKSS+ NAL+GE+R IVS
Sbjct: 151 LGLGDMLEEVVRHFP----AEDDEERKEDVIRVSIIGRPNVGKSSLTNALLGEERVIVSD 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT F +GQ + L+DTAG+RKR + TTE SV RA R+I SDVV
Sbjct: 207 VAGTTRDAIDTPFE-RDGQSYVLVDTAGMRKRGKVY---ETTEKYSVMRAMRSIEDSDVV 262
Query: 462 ALVIEAMACITEQ 474
+VI I EQ
Sbjct: 263 LVVINGEEGIIEQ 275
>gi|357050750|ref|ZP_09111947.1| GTP-binding protein engA [Enterococcus saccharolyticus 30_1]
gi|355380902|gb|EHG28034.1| GTP-binding protein engA [Enterococcus saccharolyticus 30_1]
Length = 436
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 184/314 (58%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYATGEWLGREFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
+G E P M I+ QA AI+E+ VI+F+
Sbjct: 62 ----------------DLGDE--------------PFMDQIKHQAEIAIDEADVIVFITS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+ G+T ADE +A L K+ +K +ILAVNK ++P + EF++LG P PIS
Sbjct: 92 AREGVTDADELVARLLYKS--NKPVILAVNKVDNPEMR-ADIYEFYTLGLGDPYPISGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD TE+ EE+ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGIGDVLDEAVKYF-----TEEAEEEDESIIKFSLIGRPNVGKSSLINAILGEERVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT FT GQ+F +IDTAG+RK+ + S TE SV RA RAI RSDV
Sbjct: 204 DIEGTTRDAIDTHFTSENGQEFTMIDTAGMRKKGKVYES---TEKYSVMRAMRAIERSDV 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 40/180 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH--EFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R IV D G TRD + F E+ EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIVSDIEGTTRDAI-DTHFTSENGQEFTMIDTAGM- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + E +T + +V R A AIE S V++ +++
Sbjct: 234 ---RKKGKVYE---------------STEKYSVMR--------AMRAIERSDVVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ IA + + + IIL VNK + +K + EF L ++P+
Sbjct: 268 EEGIREQDKRIAGYAHE--AGRGIILVVNKWDLLKKETNTMRDFEAEIRDEFQYLDYAPI 325
>gi|333924179|ref|YP_004497759.1| GTP-binding protein engA [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333749740|gb|AEF94847.1| GTP-binding protein engA [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 442
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/316 (44%), Positives = 183/316 (57%), Gaps = 49/316 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+VG AIV D PGVTRDR+Y + W EF LVDTGG+
Sbjct: 4 PIVAIVGRPNVGKSMLFNRIVGSRIAIVEDMPGVTRDRLYQDAEWQGREFTLVDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ ED+ + S I +QA A+ E+ IIF+VD +
Sbjct: 62 ------DFAEDV----------------------ITSQIRKQAELAMREADAIIFVVDAR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT DEE+A LR DK ++LA NK E + +F+ LG P+PISA G
Sbjct: 94 AGLTTTDEEVAKVLR--LTDKPVLLAANKVEQFDLAKIPYYDFYRLGLGDPIPISAAEGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPA----IAIVGRPNVGKSSILNALVGEDRTI 398
TG+LLD + L + +EE+ P IA++GRPNVGKSS++NA++GE+R I
Sbjct: 152 NTGDLLDELVKLLPE--------QEEDPYPPDTIRIAVIGRPNVGKSSLVNAILGEERVI 203
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VS I GTTRDAID+ F G+ + ++DTAG+R+R I E SV RA RAI R
Sbjct: 204 VSNIPGTTRDAIDSPFER-NGKSYVIVDTAGMRRRNRIDLPA---ERYSVVRALRAIDRC 259
Query: 459 DVVALVIEAMACITEQ 474
DV ++++A +TEQ
Sbjct: 260 DVALMLLDATEGVTEQ 275
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++GRPNVGKS+L N ++G R IV + PG TRD + +++VDT G+
Sbjct: 178 RIAVIGRPNVGKSSLVNAILGEERVIVSNIPGTTRDAIDSPFERNGKSYVIVDTAGMRRR 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
++ I L +V R A AI+ V + L+D
Sbjct: 238 NR-------------------IDLPAERYSVVR--------ALRAIDRCDVALMLLDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
G+T D+ I + + K IIL VNK + K +++F L ++P L
Sbjct: 271 GVTEQDKRIVGYAHEK--GKAIILVVNKWDLIEKDDKTMNKFEKKIREELSFLSYAPTLY 328
Query: 336 ISAISGTGTGELLDLV 351
ISA++ ++L++V
Sbjct: 329 ISALTKQRVPKVLEMV 344
>gi|410727128|ref|ZP_11365351.1| ribosome-associated GTPase EngA [Clostridium sp. Maddingley
MBC34-26]
gi|410599463|gb|EKQ54016.1| ribosome-associated GTPase EngA [Clostridium sp. Maddingley
MBC34-26]
Length = 438
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 185/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAEAEWLSYNFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P R+ + + + RQA AIE + VI+F+VDG+
Sbjct: 62 ----EPE--------------------RDDIIVKQ---MRRQANIAIETADVIVFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD E+A LRK+ K ++L VNK +S K EF++LG P+ ISA G
Sbjct: 95 EGLTAADNEVATMLRKS--KKPVVLVVNKVDSL-KDEDNAWEFYNLGIGDPITISASQGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD + K D EE++ IA++G+PNVGKSS++N L+GE+R IVS I
Sbjct: 152 GLGDMLDKIVENFDK--SIYD--EEDDEYIRIAMIGKPNVGKSSLINKLLGEERVIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID+ EG KF LIDTAG+R+++ + E SV R + AI R+DV
Sbjct: 208 PGTTRDAIDSYLETEEG-KFILIDTAGLRRKSKVKEE---IERYSVVRTYAAIERADVCI 263
Query: 463 LVIEAMACITEQ 474
L+I+A ITEQ
Sbjct: 264 LMIDATEGITEQ 275
>gi|347534430|ref|YP_004841100.1| GTP-binding protein engA [Lactobacillus sanfranciscensis TMW
1.1304]
gi|345504486|gb|AEN99168.1| GTP-binding protein engA [Lactobacillus sanfranciscensis TMW
1.1304]
Length = 435
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 189/312 (60%), Gaps = 43/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W H F L+DTGG+
Sbjct: 4 PTVAIVGRPNVGKSTIFNRVAGERISIVEDTPGVTRDRIYSHGEWLGHNFNLIDTGGI-E 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
VS QP I + I QA AI+E+ VIIF+V+G+
Sbjct: 63 VS-DQPFIKQ----------------------------ITAQAEIAIDEADVIIFMVNGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE +A L ++ +K ++LAVNK ++ + + +F+SLGF P PIS G
Sbjct: 94 QGITDADERVAQILYRS--NKPVVLAVNKIDN-FESRADIYDFYSLGFGDPYPISGAHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V E E+ +++N I +++GRPNVGKSS++NA +G++R IVS +
Sbjct: 151 GLGDLLDEVIKNFP--EAPEE--KKDNSI-RFSLIGRPNVGKSSLVNAFLGDNRVIVSDV 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAID++F +GQ+F ++DTAGIRKR + TE SV RA +AI SDVV
Sbjct: 206 AGTTRDAIDSKFVH-DGQEFTIVDTAGIRKRGKVYEK---TEKYSVMRAMKAIDESDVVL 261
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 262 VVLNAEEGIREQ 273
>gi|403515138|ref|YP_006655958.1| GTP-binding protein Der [Lactobacillus helveticus R0052]
gi|403080576|gb|AFR22154.1| GTP-binding protein Der [Lactobacillus helveticus R0052]
Length = 435
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/313 (43%), Positives = 185/313 (59%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVG+PNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F L+DTGG
Sbjct: 3 LPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKPGVTRDRNYAQAEWMGHKFDLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I EG ++ I QA AIEE+ VI+ L +
Sbjct: 61 ------------------ITWEG----------GKIEEEIRAQAEIAIEEADVIVMLTNV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K +ILAVNK ++P + + +F+SLG P+P+S+ G
Sbjct: 93 VNHVTDLDERIAHLLYRT--KKPVILAVNKADNPEQR-NDIYDFYSLGLGDPIPVSSSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + S+ + ++ N + + +++GRPNVGKSSI+N L+GEDR IV+
Sbjct: 150 TGIGDLLDEIVSDFPAEKDSQ-----ANDVISFSVIGRPNVGKSSIVNKLLGEDRVIVAN 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
GTTRDA+DT FT +G KF+++DTAGIR+R + TE SV RA AI RSDVV
Sbjct: 205 EEGTTRDAVDTPFT-KDGVKFKVVDTAGIRRRGKVYEK---TEKYSVLRAMAAIERSDVV 260
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 261 LLVLDASTGIREQ 273
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 42/206 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS++ N+L+G +R IV +E G TRD + +F +VDT G+ +
Sbjct: 178 SVIGRPNVGKSSIVNKLLGEDRVIVANEEGTTRDAVDTPFTKDGVKFKVVDTAGI----R 233
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E T + +V R A AAIE S V++ ++D G+
Sbjct: 234 RRGKVYE---------------KTEKYSVLR--------AMAAIERSDVVLLVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP-LPIS 337
D+ +A + + + II+ VNK + P+K +EF L ++P L +S
Sbjct: 271 REQDKHVAGYAHET--GRGIIIVVNKWDLPKKNSTSAKEFEREIRAEFQYLDYAPILFVS 328
Query: 338 AISGTGTGELLDLVCSELKKVEGTED 363
A TG+ LD + S +K+V ++
Sbjct: 329 A----KTGQRLDQIPSMVKEVYDNQN 350
>gi|381184442|ref|ZP_09893053.1| GTP-binding protein Der [Listeriaceae bacterium TTU M1-001]
gi|380315668|gb|EIA19176.1| GTP-binding protein Der [Listeriaceae bacterium TTU M1-001]
Length = 436
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 191/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKEFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P + I QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------EIGDE--PFLDQ----------IRAQAEIAIDEADVIIFIANGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ K ++LA+NK ++P QV +F+SLGF P PIS G
Sbjct: 94 EGVTDADEQVAKILYRS--KKPVVLAINKVDNPEMR-DQVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + E+ + ++ + +++GRPNVGKSS++NA++GEDR IVS I
Sbjct: 151 GLGDLLDEVRTHFP----AEEEDDYDDDVIKFSLIGRPNVGKSSLINAMLGEDRVIVSNI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT +T E Q++ +IDTAG+RK+ + + TE SV RA RAI RSDVV
Sbjct: 207 AGTTRDAIDTSYTY-EDQEYVMIDTAGMRKKGKVYEN---TEKYSVLRAMRAIERSDVVL 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIREQ 274
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N ++G +R IV + G TRD + + + E++++DT G+
Sbjct: 177 KFSLIGRPNVGKSSLINAMLGEDRVIVSNIAGTTRDAIDTSYTYEDQEYVMIDTAGMRKK 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + +V R A AIE S V++ +++ +
Sbjct: 237 GKVYEN-------------------TEKYSVLR--------AMRAIERSDVVLVVLNAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + II+ VNK ++ +K
Sbjct: 270 GIREQDKRIAGYAHD--AGRAIIIVVNKWDAIQK 301
>gi|210612261|ref|ZP_03289209.1| hypothetical protein CLONEX_01409 [Clostridium nexile DSM 1787]
gi|210151635|gb|EEA82642.1| hypothetical protein CLONEX_01409 [Clostridium nexile DSM 1787]
Length = 442
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 185/312 (59%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + EF ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNALAGEMISIVKDTPGVTRDRIYAEVTWLDKEFTMIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK D+ + S + QA AI+ + VI+F+ D +
Sbjct: 64 DSK-------DIIL----------------------SQMREQAQIAIDTADVIVFITDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD ++AD LR++ K ++L VNK +S +K + V EF++LG P+PISA S
Sbjct: 95 QGLVDADSKVADMLRRS--GKPVVLVVNKVDSFQKLMPDVYEFYNLGIGDPIPISAASRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + TE EE+ P IAIVG+PNVGKSSI+N L+GE+R IVS +
Sbjct: 153 GIGDMLDEVVKFFPERNATE----EEDERPRIAIVGKPNVGKSSIVNKLLGENRVIVSDV 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT G+++ IDTAG+R++ I E S+ R A+ R+DVV
Sbjct: 209 AGTTRDAIDTAIK-YHGKEYVFIDTAGLRRKNKIKEE---LERYSIIRTVTAVERADVVL 264
Query: 463 LVIEAMACITEQ 474
+VI+A+ ITEQ
Sbjct: 265 MVIDAVEGITEQ 276
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVG+PNVGKS++ N+L+G NR IV D G TRD + + E++ +DT G+
Sbjct: 178 PRIAIVGKPNVGKSSIVNKLLGENRVIVSDVAGTTRDAIDTAIKYHGKEYVFIDTAGL-- 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E+L + I + A+E + V++ ++D
Sbjct: 236 --RRKNKIKEELERYSII-----------------------RTVTAVERADVVLMVIDAV 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----L 334
G+T D +IA + K II+ VNK ++ K + E+ +L + P +
Sbjct: 271 EGITEQDAKIAGIAHER--GKGIIIVVNKWDAIEKHDKTMYEYEKKIRQTLAYMPYAEIM 328
Query: 335 PISAISGTGTGELLDLV 351
+SA +G +L +++
Sbjct: 329 YVSAATGQRLNKLYEMI 345
>gi|409197746|ref|ZP_11226409.1| GTP-binding protein engA [Marinilabilia salmonicolor JCM 21150]
Length = 434
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/303 (45%), Positives = 179/303 (59%), Gaps = 42/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL +AIV + GVTRDR+YG+S W F +VDTGG S
Sbjct: 5 VAIVGRPNVGKSTLFNRLTESRQAIVDEASGVTRDRIYGKSEWNGVRFSVVDTGGYAINS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ Q + I Q AIEE+ VIIF+VD G
Sbjct: 65 EDQ-----------------------------FENAIREQVLIAIEEADVIIFVVDVSTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T DE +A+ LR+ K +I+AVNK ++ ++ I + S F+S+G S L PIS+I+G GT
Sbjct: 96 VTDYDEAVAEILRRK--AKNVIIAVNKVDNHQQ-IPEASYFYSMGLSDLFPISSINGAGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GELLD + L + VEE+ +P +VGRPN GKSS++NAL+GEDR IV+P+SG
Sbjct: 153 GELLDHLVKIL-----PDKGVEEDMELPRFTVVGRPNAGKSSLINALIGEDRNIVTPLSG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+I T + G F L+DTAGIRK+ + E SV RA RAI SDV L+
Sbjct: 208 TTRDSIFTRYN-KYGHDFYLVDTAGIRKKTKVHED---LEFYSVMRAIRAIENSDVCLLM 263
Query: 465 IEA 467
I+A
Sbjct: 264 IDA 266
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 29/164 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR +VGRPN GKS+L N L+G +R IV G TRD ++ R H+F LVDT G+
Sbjct: 174 LPRFTVVGRPNAGKSSLINALIGEDRNIVTPLSGTTRDSIFTRYNKYGHDFYLVDTAGI- 232
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + +A AIE S V + ++D
Sbjct: 233 ---RKKTKVHEDLEFYSVM-----------------------RAIRAIENSDVCLLMIDA 266
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G D++I + +N K +++ VNK + K EF
Sbjct: 267 TRGFEGQDQKIFSLIERN--RKGVVVLVNKWDLIEKDNNTAKEF 308
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+AIVGRPNVGKS++ N L + IV SG TRD I + + G +F ++DT G
Sbjct: 5 VAIVGRPNVGKSTLFNRLTESRQAIVDEASGVTRDRIYGK-SEWNGVRFSVVDTGGY--- 60
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITE 473
AI S A+ + AI +DV+ V++ +T+
Sbjct: 61 -AINSEDQFENAIR-EQVLIAIEEADVIIFVVDVSTGVTD 98
>gi|357057998|ref|ZP_09118855.1| GTP-binding protein engA [Selenomonas infelix ATCC 43532]
gi|355374575|gb|EHG21869.1| GTP-binding protein engA [Selenomonas infelix ATCC 43532]
Length = 441
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 189/312 (60%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMPGVTRDRIYMDAEWLNHEFTIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + + M S QA A+EE+ VI+FLVDG+
Sbjct: 61 ----------------------IEFDESDHILRSMRS----QAELAMEEADVILFLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT++DEE+ LR+ K +ILAVNK +S + + + +F+SLG P+PISA +
Sbjct: 95 AGLTSSDEEVGRLLRRT--QKPVILAVNKIDSFEREAL-IYDFYSLGLGDPIPISASNAM 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V + K E E++ +E AIA+VGRPNVGKSS++N L+GE+R IVS +
Sbjct: 152 NLGDLLDAVVAAFPK-EAEENIDADE---IAIAVVGRPNVGKSSLVNRLLGEERVIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT FT +G K+ LIDTAG+R++ I+ E SV R+ RAI R+ VV
Sbjct: 208 PGTTRDAIDTHFT-RDGAKYLLIDTAGMRRKGKISLP---VERYSVMRSLRAIDRAGVVL 263
Query: 463 LVIEAMACITEQ 474
+VI A I EQ
Sbjct: 264 MVINAAEGILEQ 275
>gi|355677536|ref|ZP_09060439.1| GTP-binding protein engA [Clostridium citroniae WAL-17108]
gi|354813101|gb|EHE97714.1| GTP-binding protein engA [Clostridium citroniae WAL-17108]
Length = 442
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 188/312 (60%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN + G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNVIAGDTISIVKDTPGVTRDRIYADCNWLDMNFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ R+ +++M QA AI + VIIF+VD +
Sbjct: 62 ----EPD-------------------ARDVILSQM----REQAEIAISTADVIIFIVDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LRK++ K ++LAVNK +S K V EF++LG P+P+SA S
Sbjct: 95 QGLVDSDAKVADMLRKSH--KPVVLAVNKVDSVAKFGNDVFEFYNLGIGDPVPVSAASRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K +GT+ E+++R P IA+VG+PNVGKSSI+N L+GE+R IVS I
Sbjct: 153 GIGDLLDEVA---KHFDGTQAEEEDDDR-PRIAVVGKPNVGKSSIINKLLGENRVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DTE G + IDTAG+R++ I E S+ R A+ R+D+V
Sbjct: 209 AGTTRDAVDTEIIH-NGTPYVFIDTAGLRRKNKIKEE---LERYSIIRTVTAVERADIVV 264
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 265 IVIDATEGVTEQ 276
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+A+VG+PNVGKS++ N+L+G NR IV D G TRD + ++ +DT G+
Sbjct: 178 PRIAVVGKPNVGKSSIINKLLGENRVIVSDIAGTTRDAVDTEIIHNGTPYVFIDTAGL-- 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E+L + I + A+E + +++ ++D
Sbjct: 236 --RRKNKIKEELERYSII-----------------------RTVTAVERADIVVIVIDAT 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSPLP--- 335
G+T D +IA + K +I+AVNK ++ K + E+ +L F P
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGVIVAVNKWDAIEKTDKTIYEYTNKIKNTLSFMPYAEYI 328
Query: 336 -ISAISGTGTGELLDLV 351
+SA +G +L +L+
Sbjct: 329 FVSAQTGQRLPKLFELI 345
>gi|169348409|ref|ZP_02866347.1| hypothetical protein CLOSPI_00124 [Clostridium spiroforme DSM 1552]
gi|169293878|gb|EDS76011.1| ribosome biogenesis GTPase Der [Clostridium spiroforme DSM 1552]
Length = 434
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/310 (44%), Positives = 187/310 (60%), Gaps = 43/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGR NVGKS +FNR+VG +IV D GVTRDR+Y + W EF L+DTGG+
Sbjct: 5 VAIVGRANVGKSTIFNRIVGERISIVEDIAGVTRDRIYATASWLTKEFRLIDTGGIE--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
++D + TT I M QA AIEE+ +IIF+V+G+ G
Sbjct: 62 ------LKDASFTTQIKM---------------------QAEIAIEEADLIIFVVNGREG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE +A L+KN K I+LAVNK + I + +F+SLG P+P+S G G
Sbjct: 95 VTQEDEYVARLLQKN--KKPILLAVNKIDDG-AFINDIYDFYSLGIGDPIPVSGSHGIGI 151
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V +L E E+ E+E R +I+GRPNVGKSS+ N+++GE+R IVS I G
Sbjct: 152 GDLLDEVIKKLDFTE--EEFAEDEIR---FSIIGRPNVGKSSLTNSILGEERVIVSNIEG 206
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT F +GQK+R+IDTAG+RK+ I + E SV RA +I +SDV+ +V
Sbjct: 207 TTRDAIDTVFE-KDGQKYRVIDTAGMRKKGKIYEN---VEKYSVLRALSSIEKSDVIVVV 262
Query: 465 IEAMACITEQ 474
I+ + EQ
Sbjct: 263 IDGERGVIEQ 272
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +I+GRPNVGKS+L N ++G R IV + G TRD + ++ ++DT G+
Sbjct: 175 RFSIIGRPNVGKSSLTNSILGEERVIVSNIEGTTRDAIDTVFEKDGQKYRVIDTAGMRKK 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N+ + +V R A ++IE+S VI+ ++DG+
Sbjct: 235 GKIYENV-------------------EKYSVLR--------ALSSIEKSDVIVVVIDGER 267
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ +A + + K +IL VNK + K
Sbjct: 268 GVIEQDKHVAGYAHE--AGKGVILVVNKWDLVEK 299
>gi|312143875|ref|YP_003995321.1| ribosome-associated GTPase EngA [Halanaerobium hydrogeniformans]
gi|311904526|gb|ADQ14967.1| ribosome-associated GTPase EngA [Halanaerobium hydrogeniformans]
Length = 438
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/310 (43%), Positives = 186/310 (60%), Gaps = 40/310 (12%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRLVGG RAIV EP VTRDR+YG + W + F ++DTGG+
Sbjct: 6 VAIVGRPNVGKSTLFNRLVGGRRAIVEGEPNVTRDRIYGEAEWLDRTFNVIDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+P + E + + I+ QA A+EE+ VI+F+VD + G
Sbjct: 62 --------------------VPRDSDE-----IKNKIKYQAELAMEEADVILFVVDSRTG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D+EIA L + +K ++L VNK E EF+SLGF P+ ISA G T
Sbjct: 97 MTGIDQEIAQLLYRT--NKEVLLVVNKVEDFSNQQEISWEFYSLGFGDPILISAEHGKNT 154
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GELL+ + +EL + E ED E N IA++G+PNVGKSS++N LVGE+R IVS + G
Sbjct: 155 GELLEKISAELPEYEEDEDKREAIN----IAVIGKPNVGKSSLINHLVGENRVIVSDMPG 210
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDA+DT + KF IDTAG+R+++ + S E S RA +++ RSD V ++
Sbjct: 211 TTRDAVDTLIEWKD-IKFNFIDTAGLRRKSRVKES---IEYYSNLRALKSVDRSDAVLMM 266
Query: 465 IEAMACITEQ 474
I+A +++Q
Sbjct: 267 IDATKGVSDQ 276
>gi|336054210|ref|YP_004562497.1| GTP-binding protein engA [Lactobacillus kefiranofaciens ZW3]
gi|333957587|gb|AEG40395.1| GTP-binding protein engA [Lactobacillus kefiranofaciens ZW3]
Length = 435
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/314 (43%), Positives = 185/314 (58%), Gaps = 43/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR++ AIV D+ GVTRDR Y ++ W H+F L+DTGG
Sbjct: 2 VLPVVAIVGRPNVGKSTLFNRIINQRLAIVEDKAGVTRDRNYAQAEWMGHQFDLIDTGG- 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
I EG ++ I QA AIEE+ VI+ L +
Sbjct: 61 -------------------ITWEG----------GKIEEEIRAQAEIAIEEADVIVMLTN 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+T DE +A L + K +ILAVNK ++P + + +F+SLG P+PIS+
Sbjct: 92 VVNHMTDLDERVAHLLYRT--KKPVILAVNKADNPEQR-NDIYDFYSLGLGDPIPISSSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG G+LLD + +L ED + + + + +++GRPNVGKSSI+N L+GEDR IV+
Sbjct: 149 GTGIGDLLDEIVKKL-----PEDKDVKADDVISFSVIGRPNVGKSSIVNKLLGEDRVIVA 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
GTTRDA+DT FT +G KF+++DTAGIR+R + TE SV RA AI RSDV
Sbjct: 204 NEEGTTRDAVDTPFT-KDGIKFKVVDTAGIRRRGKVYEK---TEKYSVMRAMSAIERSDV 259
Query: 461 VALVIEAMACITEQ 474
V LV++A I EQ
Sbjct: 260 VLLVLDASTGIREQ 273
>gi|161507460|ref|YP_001577414.1| GTP-binding protein EngA [Lactobacillus helveticus DPC 4571]
gi|260101628|ref|ZP_05751865.1| ribosome-associated GTPase EngA [Lactobacillus helveticus DSM
20075]
gi|172048280|sp|A8YV35.1|DER_LACH4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|160348449|gb|ABX27123.1| phosphoglycerate dehydrogenase [Lactobacillus helveticus DPC 4571]
gi|260084561|gb|EEW68681.1| ribosome-associated GTPase EngA [Lactobacillus helveticus DSM
20075]
Length = 435
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/313 (43%), Positives = 185/313 (59%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVG+PNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F L+DTGG
Sbjct: 3 LPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKPGVTRDRNYAQAEWMGHKFDLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I EG ++ I QA AIEE+ VI+ L +
Sbjct: 61 ------------------ITWEG----------GKIEEEIRAQAEIAIEEADVIVMLTNV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K +ILAVNK ++P + + +F+SLG P+P+S+ G
Sbjct: 93 VNHVTDLDERIAHLLYRT--KKPVILAVNKADNPEQR-NDIYDFYSLGLGDPIPVSSSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + S+ + ++ N + + +++GRPNVGKSSI+N L+GEDR IV+
Sbjct: 150 TGIGDLLDEIVSDFPAEKDSQ-----ANDVISFSVIGRPNVGKSSIVNKLLGEDRVIVAN 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
GTTRDA+DT FT +G KF+++DTAGIR+R + TE SV RA AI RSDVV
Sbjct: 205 EEGTTRDAVDTPFT-KDGVKFKVVDTAGIRRRGKVYEK---TEKYSVLRAVAAIERSDVV 260
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 261 LLVLDASTGIREQ 273
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 42/206 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS++ N+L+G +R IV +E G TRD + +F +VDT G+ +
Sbjct: 178 SVIGRPNVGKSSIVNKLLGEDRVIVANEEGTTRDAVDTPFTKDGVKFKVVDTAGI----R 233
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E T + +V R A AAIE S V++ ++D G+
Sbjct: 234 RRGKVYE---------------KTEKYSVLR--------AVAAIERSDVVLLVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP-LPIS 337
D+ +A + + + II+ VNK + P+K +EF L ++P L +S
Sbjct: 271 REQDKHVAGYAHE--AGRGIIIVVNKWDLPKKNSTSAKEFEREIRAEFQYLDYAPILFVS 328
Query: 338 AISGTGTGELLDLVCSELKKVEGTED 363
A TG+ LD + S +K+V ++
Sbjct: 329 A----KTGQRLDQIPSMVKEVYDNQN 350
>gi|51892817|ref|YP_075508.1| GTP-binding protein [Symbiobacterium thermophilum IAM 14863]
gi|81826113|sp|Q67NS9.1|DER_SYMTH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|51856506|dbj|BAD40664.1| GTP-binding protein [Symbiobacterium thermophilum IAM 14863]
Length = 471
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 185/312 (59%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL AIV D+PGVTRDR+Y + W LVDTGG+
Sbjct: 3 PIVAIVGRPNVGKSTLFNRLTQSRHAIVEDQPGVTRDRLYADTEWNGRTLTLVDTGGI-- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ EG T EA V RQA AI E+ VIIF+VD
Sbjct: 61 ----------------QLDKEG---DTIEAHVT-------RQAELAIREADVIIFVVDVT 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
G+TA D E+AD LR+ K +I+AVNK E+ ++ + EFW+LG PL +SA G
Sbjct: 95 DGVTAPDLEVADLLRRQR--KPVIVAVNKVENLKRE-DEALEFWALGLEPLINVSAEHGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD V + L + E EE +A++GRPNVGKSS++NA++GE+R IVS +
Sbjct: 152 GTGDLLDAVVAALPDLSEPE---PEEGGPVRVAVIGRPNVGKSSLVNAILGEERVIVSDV 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID E KF LIDTAG+R++A + + E SV RA RA+ R+ VV
Sbjct: 209 PGTTRDAIDVLVERGE-DKFLLIDTAGMRRKARVEEA---VERYSVMRALRAVERAQVVL 264
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 265 IVIDAQDGVTEQ 276
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 76/148 (51%), Gaps = 29/148 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G R IV D PG TRD + GE +F+L+DT G+
Sbjct: 179 RVAVIGRPNVGKSSLVNAILGEERVIVSDVPGTTRDAIDVLVERGEDKFLLIDTAGMRRK 238
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
++ E AV R M +A A+E + V++ ++D Q
Sbjct: 239 ARV------------------------EEAVERYSVM---RALRAVERAQVVLIVIDAQD 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK 312
G+T D+ IA + +N K I+ VNK
Sbjct: 272 GVTEQDQRIAGYAHEN--GKACIVVVNK 297
>gi|42519017|ref|NP_964947.1| GTP-binding protein EngA [Lactobacillus johnsonii NCC 533]
gi|227889871|ref|ZP_04007676.1| GTP-binding protein EngA [Lactobacillus johnsonii ATCC 33200]
gi|268319593|ref|YP_003293249.1| GTP-binding protein engA [Lactobacillus johnsonii FI9785]
gi|81832245|sp|Q74JL6.1|DER_LACJO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|41583304|gb|AAS08913.1| probable GTP-binding protein EngA [Lactobacillus johnsonii NCC 533]
gi|227849735|gb|EEJ59821.1| GTP-binding protein EngA [Lactobacillus johnsonii ATCC 33200]
gi|262397968|emb|CAX66982.1| GTP-binding protein engA [Lactobacillus johnsonii FI9785]
Length = 435
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/313 (43%), Positives = 183/313 (58%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+ GVTRDR+Y R+ W HEF+L+DTGG
Sbjct: 3 LPVVALVGRPNVGKSTIFNRIINSRVAIVEDKAGVTRDRIYARAEWMGHEFILIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I L + E + I+ QA AI+E+ VI+ L D
Sbjct: 61 -----------------------ITLDSGE-----IEEQIKAQAEIAIDEADVIVMLGDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K +ILA+NK ++P + + +F+SLG P+P+S G
Sbjct: 93 TQHMTNMDETIAKMLYRT--KKPVILAINKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + E G + E+ I +++GRPNVGKSS++NA++GE R IVS
Sbjct: 150 TGMGDLLDAIVGEF----GDKANQHEDGSI-RFSVIGRPNVGKSSLVNAILGEQRVIVSN 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRDAIDT FT +GQK+ ++DTAGIR+R + TE SV RA AI SD+
Sbjct: 205 IEGTTRDAIDTTFTN-DGQKYTIVDTAGIRRRGKVYEK---TEKYSVLRAISAIEESDIT 260
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 261 LLVLDASTGIREQ 273
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N ++G R IV + G TRD + ++ +VDT G+
Sbjct: 176 RFSVIGRPNVGKSSLVNAILGEQRVIVSNIEGTTRDAIDTTFTNDGQKYTIVDTAGI--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A +AIEES + + ++D
Sbjct: 233 -RRRGKVYE---------------KTEKYSVLR--------AISAIEESDITLLVLDAST 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP- 335
G+ D+ +A + + +I+ VNK + P+K + EF L ++P+
Sbjct: 269 GIREQDKHVAGYAHD--AGRGVIIVVNKWDLPKKDSRSMKDFEDTIRREFQYLDYAPIIF 326
Query: 336 ISAISGTGTGELLDLVC----SELKKVEGT--EDLVEEENRIPAIAIV 377
+SA +G ++L LV ++ ++++ + DL+ E RI +V
Sbjct: 327 VSAKTGQRVPDILKLVKEVHENQTRRIQSSVLNDLLLEATRITPTPLV 374
>gi|226312035|ref|YP_002771929.1| GTP-binding protein EngA [Brevibacillus brevis NBRC 100599]
gi|254783139|sp|C0ZCB6.1|DER_BREBN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|226094983|dbj|BAH43425.1| GTP-binding protein EngA [Brevibacillus brevis NBRC 100599]
Length = 437
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 135/313 (43%), Positives = 181/313 (57%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNRL+G AIV D PGVTRDR+YG+ W H F ++DTGG
Sbjct: 3 LPVVAIVGRPNVGKSTIFNRLIGERVAIVEDMPGVTRDRLYGKGEWLTHTFHVIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + + +M QA AI+E+ VII + D
Sbjct: 61 -----------------------IEFGETDEILTQM----RYQAELAIDEADVIIMIADS 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T AD E++ L N K ++LAVNK ++P + +F+SLG P P+S G
Sbjct: 94 RTGVTDADVELSRML--NRTGKPVVLAVNKADNPEMR-ADIYDFYSLGLGEPFPVSGSHG 150
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G G++L+ VC ED E+ + + ++I+GRPNVGKSS+ NA++GE+R IVS
Sbjct: 151 LGLGDMLEEVCQHFP----AEDDEEKRDDVIRVSIIGRPNVGKSSLTNAILGEERVIVSE 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT F + Q + L+DTAG+RKR + TTE SV RA R+I SDVV
Sbjct: 207 VAGTTRDAIDTPFE-RDDQSYVLVDTAGMRKRGKVY---ETTEKYSVMRAMRSIEDSDVV 262
Query: 462 ALVIEAMACITEQ 474
+VI I EQ
Sbjct: 263 LVVINGEEGIIEQ 275
>gi|299821633|ref|ZP_07053521.1| ribosome-associated GTPase EngA [Listeria grayi DSM 20601]
gi|299817298|gb|EFI84534.1| ribosome-associated GTPase EngA [Listeria grayi DSM 20601]
Length = 447
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/312 (45%), Positives = 192/312 (61%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W +F ++DTGG+
Sbjct: 15 PVVAIVGRPNVGKSTIFNRIVGERISIVEDVPGVTRDRIYNSAEWLGKDFNIIDTGGI-- 72
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
DL+ + I QA AI+E+ VIIF+ +G+
Sbjct: 73 ----------DLSDEPFL------------------DQIRAQAEIAIDEADVIIFITNGR 104
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ K ++LA+NK ++P Q+ +F+SLGF P PIS G
Sbjct: 105 EGVTDADEQVAKILYRS--QKPVVLAINKVDNPEMR-TQIYDFYSLGFGEPFPISGSHGL 161
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD E++K ED VEE++ I +++GRPNVGKSSILNAL+GE+R IVS I
Sbjct: 162 GLGDLLD----EVRKHFPAEDEVEEDDDIIKFSLIGRPNVGKSSILNALLGEERVIVSDI 217
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT + + Q++ +IDTAG+RKR + TE SV RA RAI RSDVV
Sbjct: 218 AGTTRDAIDTSYI-YDDQEYIMIDTAGMRKRGKVYEG---TEKYSVLRAMRAIERSDVVL 273
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 274 VVLNAEEGIREQ 285
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 35/192 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS++ N L+G R IV D G TRD + + + E++++DT G+
Sbjct: 188 KFSLIGRPNVGKSSILNALLGEERVIVSDIAGTTRDAIDTSYIYDDQEYIMIDTAGMRKR 247
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K EG T + +V R A AIE S V++ +++ +
Sbjct: 248 GKV---------------YEG----TEKYSVLR--------AMRAIERSDVVLVVLNAEE 280
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------LGFSPLPISA 338
G+ D++IA + + I++ VNK ++ K + F + L S PI
Sbjct: 281 GIREQDKKIAGYAHD--AGRAIVIVVNKWDAIEKDEKTMKAFETDIREQFLFLSYAPIVY 338
Query: 339 ISGTGTGELLDL 350
+S L +L
Sbjct: 339 VSAKTKQRLTNL 350
>gi|416998755|ref|ZP_11939424.1| ribosome biogenesis GTPase Der [Veillonella parvula
ACS-068-V-Sch12]
gi|333976908|gb|EGL77767.1| ribosome biogenesis GTPase Der [Veillonella parvula
ACS-068-V-Sch12]
Length = 444
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 192/312 (61%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W EF ++DTG
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTG---- 59
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
GI T + V +P M+ QA AIEE+ VI+F+VDG+
Sbjct: 60 ---------------------GIEFITENSHV--IPKMMRLQAELAIEEADVILFVVDGK 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ ADEE+A+ LR + K ++L VNK +S + + EF++LG P+ ISA +
Sbjct: 97 QGIVPADEEVANILRAS--GKPVVLVVNKIDSVNQE-PNIYEFYNLGLGDPIGISAKNLM 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V GT V++E+ I +A++GRPNVGKSS+ NAL+G+DR IVS +
Sbjct: 154 NLGDLLDDTVKHFPPV-GTN--VDDEDTI-HVAVIGRPNVGKSSLTNALLGQDRVIVSDV 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+IDT +T EGQKF LIDTAG+R+++ I + E S+ R+ R++ R+D+V
Sbjct: 210 AGTTRDSIDTYWTH-EGQKFVLIDTAGMRRKSKIEEA---VERYSIVRSLRSVDRADIVV 265
Query: 463 LVIEAMACITEQ 474
LV++A +TEQ
Sbjct: 266 LVLDAQDGVTEQ 277
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 38/182 (20%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFM 214
NV + VA++GRPNVGKS+L N L+G +R IV D G TRD + ++W +F+
Sbjct: 172 NVDDEDTIHVAVIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSI--DTYWTHEGQKFV 229
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ SK E AV R + ++ +++ +
Sbjct: 230 LIDTAGMRRKSKI------------------------EEAVERYSIV---RSLRSVDRAD 262
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE--FWSL 329
+++ ++D Q G+T D++IA + + K +++ VNK E K ++ +E + L
Sbjct: 263 IVVLVLDAQDGVTEQDKKIAGYAYE--AGKGVVIVVNKWDLVEKDDKTTLRFTEDIYDEL 320
Query: 330 GF 331
GF
Sbjct: 321 GF 322
>gi|375089285|ref|ZP_09735612.1| ribosome-associated GTPase EngA [Facklamia languida CCUG 37842]
gi|374567061|gb|EHR38292.1| ribosome-associated GTPase EngA [Facklamia languida CCUG 37842]
Length = 437
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/313 (45%), Positives = 189/313 (60%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P VAIVGRPNVGKS LFNR+VG +IV D GVTRDR+Y + W EF L+DTGG
Sbjct: 3 IPVVAIVGRPNVGKSTLFNRMVGERLSIVEDYEGVTRDRIYATASWLGREFRLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I M PL + I+ QA A+EE+ VI+F+V
Sbjct: 61 ------------------IDMSDEPLMQQ----------IKYQAEIAMEEADVILFVVGS 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE IA +L ++ +K ++LAVNK ++P + EF+SLG P PIS+ G
Sbjct: 93 REGVTDADEAIAHYLHRS--EKPVVLAVNKADNPEQR-ATAYEFYSLGHGDPYPISSTHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TGTG+LLD + + L + G D E RI + +GRPNVGKSS++NA++ E+R IVS
Sbjct: 150 TGTGDLLDRLLALLPEEAGETDTQE---RI-KFSFIGRPNVGKSSLVNAVLQEERVIVSN 205
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTR+A+DT+F G+ F +IDTAGIRKR + + TE SV RA AI RSD+V
Sbjct: 206 IEGTTREAVDTDFVSQTGRPFTMIDTAGIRKRGKVYEN---TEKYSVMRALSAIDRSDIV 262
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 263 CLVLDAETGIREQ 275
>gi|225389099|ref|ZP_03758823.1| hypothetical protein CLOSTASPAR_02845 [Clostridium asparagiforme
DSM 15981]
gi|225044833|gb|EEG55079.1| hypothetical protein CLOSTASPAR_02845 [Clostridium asparagiforme
DSM 15981]
Length = 441
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 185/312 (59%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAGETISIVKDTPGVTRDRIYADCSWLNMNFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ T + +++M QA AI + VI+F+VD +
Sbjct: 62 ----EPD-------------------TSDVILSQM----REQAEIAIATADVIVFIVDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD ++AD LRK+ K ++LAVNK +S K V EF++LG P+P+SA S
Sbjct: 95 QGLVDADTKVADMLRKS--RKPVVLAVNKVDSYEKFGNDVYEFYNLGIGDPVPVSAASRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD E+ K L EEE+ P IA+VG+PNVGKSSI+N L+GE+R IVS I
Sbjct: 153 GIGDLLD----EVVKYFDCAKLEEEEDERPRIAVVGKPNVGKSSIINKLLGENRVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DTE +G + IDTAG+R+++ I E S+ R A+ R+D+V
Sbjct: 209 AGTTRDAVDTEIVH-DGTPYVFIDTAGLRRKSKIHEE---LERYSIIRTVTAVERADIVV 264
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 265 VVIDAKEGVTEQ 276
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+A+VG+PNVGKS++ N+L+G NR IV D G TRD + ++ +DT G+
Sbjct: 178 PRIAVVGKPNVGKSSIINKLLGENRVIVSDIAGTTRDAVDTEIVHDGTPYVFIDTAGLRR 237
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK I E+L + I + A+E + +++ ++D +
Sbjct: 238 KSK----IHEELERYSII-----------------------RTVTAVERADIVVVVIDAK 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP----L 334
G+T D +IA + K II+AVNK ++ K + E+ + L F P L
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGIIVAVNKWDAIEKNDKTIYEYTNKLKEILSFIPYAEYL 328
Query: 335 PISAISGTGTGELLDLV 351
+SA +G +L +++
Sbjct: 329 FVSAATGQRLPKLFEVI 345
>gi|323703070|ref|ZP_08114725.1| ribosome-associated GTPase EngA [Desulfotomaculum nigrificans DSM
574]
gi|323531964|gb|EGB21848.1| ribosome-associated GTPase EngA [Desulfotomaculum nigrificans DSM
574]
Length = 442
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 139/316 (43%), Positives = 183/316 (57%), Gaps = 49/316 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+VG AIV D PGVTRDR+Y + W EF LVDTGG+
Sbjct: 4 PIVAIVGRPNVGKSMLFNRIVGSRIAIVEDMPGVTRDRLYQDAEWQGREFTLVDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ ED+ + S I +QA A+ E+ +IF+VD +
Sbjct: 62 ------DFAEDV----------------------ITSQIRKQAELAMREADAVIFVVDAR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT DEE+A LR DK ++LA NK E + +F+ LG P+PISA G
Sbjct: 94 AGLTTTDEEVAKVLR--LTDKPVLLAANKVEQFDLAKIPYYDFYRLGLGDPIPISAAEGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPA----IAIVGRPNVGKSSILNALVGEDRTI 398
TG+LLD + L + +EE+ P IA++GRPNVGKSS++NA++GE+R I
Sbjct: 152 NTGDLLDELVKLLPE--------QEEDPYPPDTIRIAVIGRPNVGKSSLVNAILGEERVI 203
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VS I GTTRDAID+ F G+ + ++DTAG+R+R I E SV RA RAI R
Sbjct: 204 VSNIPGTTRDAIDSPFER-NGKSYVIVDTAGMRRRNRIDLPA---ERYSVVRALRAIDRC 259
Query: 459 DVVALVIEAMACITEQ 474
DV ++++A +TEQ
Sbjct: 260 DVALMLLDATEGVTEQ 275
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++GRPNVGKS+L N ++G R IV + PG TRD + +++VDT G+
Sbjct: 178 RIAVIGRPNVGKSSLVNAILGEERVIVSNIPGTTRDAIDSPFERNGKSYVIVDTAGMRRR 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
++ I L +V R A AI+ V + L+D
Sbjct: 238 NR-------------------IDLPAERYSVVR--------ALRAIDRCDVALMLLDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
G+T D+ I + + K IIL VNK + K +++F L ++P L
Sbjct: 271 GVTEQDKRIVGYAHEK--GKAIILVVNKWDLIEKDDKTMNKFEKKIREELSFLSYAPTLY 328
Query: 336 ISAISGTGTGELLDLV 351
ISA++ ++L++V
Sbjct: 329 ISALTKQRVPKVLEMV 344
>gi|325661996|ref|ZP_08150615.1| GTP-binding protein engA [Lachnospiraceae bacterium 4_1_37FAA]
gi|331085846|ref|ZP_08334929.1| GTP-binding protein engA [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325471659|gb|EGC74878.1| GTP-binding protein engA [Lachnospiraceae bacterium 4_1_37FAA]
gi|330406769|gb|EGG86274.1| GTP-binding protein engA [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 442
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 189/312 (60%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + EF L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGEMISIVKDTPGVTRDRIYAEVTWLDREFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ +++ +A+M QA AI+ + VIIF+ D +
Sbjct: 62 ----EPD-------------------SKDIILAQM----REQAQIAIDTADVIIFITDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR++ K ++L VNK +S +K + V EF++LG P+PISA S
Sbjct: 95 QGLQDSDSKVADMLRRS--GKPVVLVVNKVDSFQKLMADVYEFYNLGIGDPIPISASSRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + + E+ E P IAIVG+PNVGKSSI+N LVGE+R IVS I
Sbjct: 153 GLGDMLDAVAAHFPEHSAEEEEDER----PRIAIVGKPNVGKSSIINKLVGENRVIVSNI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE T G+++ IDTAG+R++ I E S+ R A+ R+DVV
Sbjct: 209 AGTTRDAIDTEITW-NGKEYVFIDTAGLRRKNKIKEE---LERYSIIRTVTAVERADVVL 264
Query: 463 LVIEAMACITEQ 474
+VI+A+ +TEQ
Sbjct: 265 VVIDAVEGVTEQ 276
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 45/212 (21%)
Query: 156 GNVPEH-------LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
+ PEH PR+AIVG+PNVGKS++ N+LVG NR IV + G TRD + W
Sbjct: 163 AHFPEHSAEEEEDERPRIAIVGKPNVGKSSIINKLVGENRVIVSNIAGTTRDAIDTEITW 222
Query: 209 GEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATA 268
E++ +DT G+ + + I E+L + I +
Sbjct: 223 NGKEYVFIDTAGL----RRKNKIKEELERYSII-----------------------RTVT 255
Query: 269 AIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS 328
A+E + V++ ++D G+T D +IA + K +I+ VNK ++ K + E+
Sbjct: 256 AVERADVVLVVIDAVEGVTEQDAKIAGIAHER--GKGVIIIVNKWDAIEKNDKTMYEYEK 313
Query: 329 -----LGFSP----LPISAISGTGTGELLDLV 351
L + P + +SA +G +L D++
Sbjct: 314 NVRQVLSYMPYAEIMYVSAKTGQRLPKLFDMI 345
>gi|385813937|ref|YP_005850330.1| GTP-binding protein engA [Lactobacillus helveticus H10]
gi|323466656|gb|ADX70343.1| GTP-binding protein engA [Lactobacillus helveticus H10]
Length = 435
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/313 (43%), Positives = 185/313 (59%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVG+PNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F L+DTGG
Sbjct: 3 LPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKPGVTRDRNYAQAEWMGHKFDLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I EG ++ I QA AIEE+ VI+ L +
Sbjct: 61 ------------------ITWEG----------GKIEEEIRAQAEIAIEEADVIVMLTNV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K +ILAVNK ++P + + +F+SLG P+P+S+ G
Sbjct: 93 VNHVTDLDERIAHLLYRT--KKPVILAVNKADNPEQR-NDIYDFYSLGLGDPIPVSSSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + S+ + ++ N + + +++GRPNVGKSS++N L+GEDR IV+
Sbjct: 150 TGIGDLLDEIVSDFPAEKDSQ-----ANDVISFSVIGRPNVGKSSVVNKLLGEDRVIVAN 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
GTTRDA+DT FT +G KF+++DTAGIR+R + TE SV RA AI RSDVV
Sbjct: 205 EEGTTRDAVDTPFT-KDGVKFKVVDTAGIRRRGKVYEK---TEKYSVLRAVAAIERSDVV 260
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 261 LLVLDASTGIREQ 273
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 42/206 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS++ N+L+G +R IV +E G TRD + +F +VDT G+ +
Sbjct: 178 SVIGRPNVGKSSVVNKLLGEDRVIVANEEGTTRDAVDTPFTKDGVKFKVVDTAGI----R 233
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E T + +V R A AAIE S V++ ++D G+
Sbjct: 234 RRGKVYE---------------KTEKYSVLR--------AVAAIERSDVVLLVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP-LPIS 337
D+ +A + + + II+ VNK + P+K +EF L ++P L +S
Sbjct: 271 REQDKHVAGYAHE--AGRGIIIVVNKWDLPKKNSTSAKEFEREIRAEFQYLDYAPILFVS 328
Query: 338 AISGTGTGELLDLVCSELKKVEGTED 363
A TG+ LD + S +K+V ++
Sbjct: 329 A----KTGQRLDQIPSMVKEVYDNQN 350
>gi|333394949|ref|ZP_08476768.1| GTP-binding protein Der [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
gi|336392879|ref|ZP_08574278.1| GTP-binding protein Der [Lactobacillus coryniformis subsp. torquens
KCTC 3535]
Length = 436
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 137/313 (43%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W HEF L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTVFNRIAGQRVSIVDDAPGVTRDRIYTSAEWLGHEFNLIDTGGIDI 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V QP + + I+ QA AIEE+ VI+F+ +
Sbjct: 64 V--DQPFVEQ----------------------------IKEQAEIAIEEADVIVFVTSVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ-VSEFWSLGF-SPLPISAISG 341
G+T ADE +A L ++ DK ++LAVNK ++ + + Q + ++++LGF P+ IS + G
Sbjct: 94 EGITDADENVARILYRS--DKPVVLAVNKVDN--QDLRQDIYDYYALGFDEPIGISGVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G G+LLD + T+ E+E+RI +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 150 IGVGDLLDAIIKHFP----TDIEPEDESRI-RFSLIGRPNVGKSSLVNAILGENRVIVSD 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDAIDT F G +F +IDTAG+RKR + E SV RA AI RSDVV
Sbjct: 205 IAGTTRDAIDTRFAAANGTEFNMIDTAGLRKR---GKAYENAEKYSVLRAMSAIDRSDVV 261
Query: 462 ALVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 262 LVVLNAEEGIREQ 274
>gi|375088358|ref|ZP_09734698.1| GTPase Der [Dolosigranulum pigrum ATCC 51524]
gi|374562396|gb|EHR33726.1| GTPase Der [Dolosigranulum pigrum ATCC 51524]
Length = 437
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 145/314 (46%), Positives = 184/314 (58%), Gaps = 45/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV DEPGVTRDR+Y + W EF L+DTGG
Sbjct: 4 PLVAIVGRPNVGKSTIFNRIVGERISIVRDEPGVTRDRIYADAEWLGKEFSLIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I M+ PL I+ QA AIEE+ VII + Q
Sbjct: 61 -----------------ITMDEEPLHKE----------IKLQAEIAIEEADVIIMMTSVQ 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAIS 340
G+T D+++A L K+ K IILAVNK ++P R I Q F++LG P PIS
Sbjct: 94 DGITDMDDQVAPILYKS--GKPIILAVNKADNPELRTDIYQ---FYALGLGDPYPISGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG G+LLD V ++ E + E+ I +++GRPNVGKSS++N ++GE+R IVS
Sbjct: 149 GTGLGDLLDEVIAQFP---ADEPELYGEDTI-KFSLIGRPNVGKSSLVNKILGENRVIVS 204
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F + ++F +IDTAGIR+R + TE SV RA RAI RSDV
Sbjct: 205 DIEGTTRDAIDTPFITQDDREFVMIDTAGIRRRGKVYEK---TEKYSVMRAMRAIERSDV 261
Query: 461 VALVIEAMACITEQ 474
V VI+A I EQ
Sbjct: 262 VLCVIDAEVGIREQ 275
>gi|392374271|ref|YP_003206104.1| GTP-binding protein engA [Candidatus Methylomirabilis oxyfera]
gi|258591964|emb|CBE68269.1| GTP-binding protein engA [Candidatus Methylomirabilis oxyfera]
Length = 439
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 135/313 (43%), Positives = 183/313 (58%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP V IVGRPNVGKS LFNRLVGG RAIV D+PGVTRDR+Y W F L DTGG+
Sbjct: 3 LPIVTIVGRPNVGKSTLFNRLVGGRRAIVHDQPGVTRDRLYATVEWKGRAFTLGDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+P + LA + + Q A++ES ++IF+VD
Sbjct: 62 -----EPGVGTGLA-----------------------AQVLAQVRQAVQESVLVIFVVDA 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISG 341
+ GLT DEEIA LR + + I++A NK + P ++ SEF+ +GF+ + P+SA G
Sbjct: 94 REGLTPLDEEIARLLRHDVQTR-IVVAPNKVDRPTHEVL-ASEFFRIGFAEVCPVSAEHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G EL D++ L E E++ + +VGRPNVGKSS++NAL+G++R IVS
Sbjct: 152 LGVAELCDVIAEALPVTESA-----SESKAIRVTVVGRPNVGKSSLVNALLGQERVIVSE 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
+GTTRDAIDT FT + + LIDTAG+R R+ + E SV RA +AI RSDV
Sbjct: 207 QAGTTRDAIDTPFTYND-TAYILIDTAGLRSRSKVQQP---LERFSVVRALKAIERSDVA 262
Query: 462 ALVIEAMACITEQ 474
++++A IT+Q
Sbjct: 263 LILVDAKDGITDQ 275
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 38/198 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RV +VGRPNVGKS+L N L+G R IV ++ G TRD + + + ++L+DT G+ +
Sbjct: 178 RVTVVGRPNVGKSSLVNALLGQERVIVSEQAGTTRDAIDTPFTYNDTAYILIDTAGLRSR 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK Q +E ++ +A AIE S V + LVD +
Sbjct: 238 SKVQ-QPLERFSVV--------------------------RALKAIERSDVALILVDAKD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW--------SLGFSPLP- 335
G+T D +IA +++ + I+ NK + G +F + ++P+
Sbjct: 271 GITDQDAKIAAYVQD--VGSGAIVVANKWDLMPSGADARQQFTLEIRDRLRHVDYAPIAF 328
Query: 336 ISAISGTGTGELLDLVCS 353
+SA++G+ L LV S
Sbjct: 329 VSALTGSDVPTLFPLVQS 346
>gi|227543422|ref|ZP_03973471.1| GTP-binding protein EngA [Lactobacillus reuteri CF48-3A]
gi|338204371|ref|YP_004650516.1| ribosome-associated GTPase EngA [Lactobacillus reuteri SD2112]
gi|227186601|gb|EEI66672.1| GTP-binding protein EngA [Lactobacillus reuteri CF48-3A]
gi|336449611|gb|AEI58226.1| ribosome-associated GTPase EngA [Lactobacillus reuteri SD2112]
Length = 440
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/311 (41%), Positives = 187/311 (60%), Gaps = 42/311 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNR+ G +IV D PGVTRDR+Y + W F ++DTGG
Sbjct: 7 PIVAVVGRPNVGKSTLFNRIAGERISIVEDTPGVTRDRIYAHAEWLGKHFSMIDTGG--- 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + PL T+ I +QA AI+E+ VIIF+ D +
Sbjct: 64 -----------------IEISDQPLLTQ----------IRQQAEVAIDEADVIIFVADVE 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K ++LAVNK ++P + + +++SLG P +S++ G
Sbjct: 97 NGVTDADEQVARILYRS--NKPVVLAVNKVDNPERR-SDIYDYYSLGLGEPYAVSSVHGI 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V E ++ +E+ + +GRPNVGKSS++NA++GE+R IVS +
Sbjct: 154 GMGDLLDAVIKEFP-----DNAANDEDDSIHFSFIGRPNVGKSSLVNAILGENRVIVSNV 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAI+T+F +GQKF ++DTAGIRK+ I + TE S+ R+ RAI SDVV
Sbjct: 209 AGTTRDAINTQFETADGQKFTMVDTAGIRKKGKIYEN---TERYSLMRSMRAIDDSDVVL 265
Query: 463 LVIEAMACITE 473
+V+ A I E
Sbjct: 266 VVLNAEEGIRE 276
>gi|310827223|ref|YP_003959580.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308738957|gb|ADO36617.1| hypothetical protein ELI_1631 [Eubacterium limosum KIST612]
Length = 439
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 187/312 (59%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN+LVG AIV D PGVTRDR+ + W H F L+DTGG+
Sbjct: 4 PIVAVVGRPNVGKSTLFNKLVGERIAIVEDTPGVTRDRIIADAEWQNHHFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ +D+ + + QA AI+ + +I+ LVDG+
Sbjct: 62 ----EPHTKDDILLQMRV-----------------------QAELAIDMADLIVLLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
G+TA+D E+A+ +RK+ K ++LAVNK +S + + EF++LG P+ ISA G
Sbjct: 95 EGMTASDLEVANMIRKH--SKNVLLAVNKVDSQQLE-NNIFEFYNLGIGEPIAISAEQGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+ LD V +KKV ED E++N IA++G+PN GKS+++N +VG DR IVS +
Sbjct: 152 GLGDFLDEVIERVKKVYD-EDAQEDDN--LKIAVIGKPNAGKSTLINKMVGHDRLIVSDV 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDTE G+ + LIDTAG+RK+ I E S+ RA A+ RSDVV
Sbjct: 209 PGTTRDAIDTEVRF-NGRDYTLIDTAGLRKKKKIYED---IERYSIVRAIAAVDRSDVVL 264
Query: 463 LVIEAMACITEQ 474
++I+ +TEQ
Sbjct: 265 VLIDGEKGVTEQ 276
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 27/130 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PN GKS L N++VG +R IV D PG TRD + + ++ L+DT G+
Sbjct: 179 KIAVIGKPNAGKSTLINKMVGHDRLIVSDVPGTTRDAIDTEVRFNGRDYTLIDTAGL--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + I ED+ + + +A AA++ S V++ L+DG+
Sbjct: 236 -RKKKKIYEDIERYSIV-----------------------RAIAAVDRSDVVLVLIDGEK 271
Query: 285 GLTAADEEIA 294
G+T D +IA
Sbjct: 272 GVTEQDAKIA 281
>gi|427414339|ref|ZP_18904529.1| ribosome-associated GTPase EngA [Veillonella ratti ACS-216-V-Col6b]
gi|425714715|gb|EKU77718.1| ribosome-associated GTPase EngA [Veillonella ratti ACS-216-V-Col6b]
Length = 444
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 190/312 (60%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W EF ++DTG
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTG---- 59
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
GI T ++ V +P M+ QA AIEE+ VI+F+VDG+
Sbjct: 60 ---------------------GIEFITADSHV--IPKMMRLQAQLAIEEADVILFVVDGK 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ ADEE+A+ LR + K ++L VNK +S + + EF++LG P+ ISA +
Sbjct: 97 QGIVPADEEVANILRAS--GKPVLLVVNKIDSVNQE-ANIYEFYNLGIGDPIGISAKNLM 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V ED EE+ I +A++GRPNVGKSS+ NAL+G+DR IVS +
Sbjct: 154 NLGDLLDDVVKHFPDSAQAED---EEDTI-HVALIGRPNVGKSSLTNALLGQDRVIVSDV 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+IDT + +GQKF LIDTAG+R++A I + E S+ R+ R++ R+D+V
Sbjct: 210 AGTTRDSIDTHWNH-DGQKFVLIDTAGMRRKAKI---DAPVERYSIVRSLRSVDRADIVV 265
Query: 463 LVIEAMACITEQ 474
LV++ + +TEQ
Sbjct: 266 LVLDGVDGVTEQ 277
>gi|166030917|ref|ZP_02233746.1| hypothetical protein DORFOR_00598 [Dorea formicigenerans ATCC
27755]
gi|346306527|ref|ZP_08848683.1| GTP-binding protein engA [Dorea formicigenerans 4_6_53AFAA]
gi|166029184|gb|EDR47941.1| ribosome biogenesis GTPase Der [Dorea formicigenerans ATCC 27755]
gi|345897901|gb|EGX67798.1| GTP-binding protein engA [Dorea formicigenerans 4_6_53AFAA]
Length = 442
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 184/312 (58%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + +F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGEKISIVKDTPGVTRDRIYADVSWLDKDFTLIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK D+ + S + QA AI+ S VIIF+ D +
Sbjct: 64 ESK-------DIIL----------------------SQMREQAQIAIDTSDVIIFITDVK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR++ K +IL VNK ++ K + EF++LG P+PISA S
Sbjct: 95 QGLVDSDSKVADMLRRS--GKPVILVVNKVDNFDKYMADTYEFYNLGIGDPVPISASSRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + G E EE++R P +AIVG+PNVGKSSI+N L+GE R IVS I
Sbjct: 153 GLGDMLDKVIEHFPEHAGEE---EEDSR-PRVAIVGKPNVGKSSIINKLLGEQRVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE G+++ IDTAG+R++ I E S+ R A+ R+DVV
Sbjct: 209 AGTTRDAIDTEIVH-NGKEYVFIDTAGLRRKNKIKEE---LERYSIIRTVTAVERADVVL 264
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 265 VVIDATQGVTEQ 276
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 45/214 (21%)
Query: 154 TIGNVPEHL-------LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
I + PEH PRVAIVG+PNVGKS++ N+L+G R IV D G TRD +
Sbjct: 161 VIEHFPEHAGEEEEDSRPRVAIVGKPNVGKSSIINKLLGEQRVIVSDIAGTTRDAIDTEI 220
Query: 207 FWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQA 266
E++ +DT G+ + + I E+L + I +
Sbjct: 221 VHNGKEYVFIDTAGL----RRKNKIKEELERYSII-----------------------RT 253
Query: 267 TAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
A+E + V++ ++D G+T D ++A + K +I+ VNK ++ K + E+
Sbjct: 254 VTAVERADVVLVVIDATQGVTEQDAKVAGIAHER--GKGVIIVVNKWDAIEKNDKTMREY 311
Query: 327 WS-----LGFSP----LPISAISGTGTGELLDLV 351
+ L F P + +SA++G ++ D++
Sbjct: 312 ENEVRRVLSFMPYAEIMYVSAVTGQRLPKMFDMI 345
>gi|359411359|ref|ZP_09203824.1| GTP-binding protein engA [Clostridium sp. DL-VIII]
gi|357170243|gb|EHI98417.1| GTP-binding protein engA [Clostridium sp. DL-VIII]
Length = 438
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 185/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL G +IV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRLAGKRISIVQDTPGVTRDRVYAEAEWLNYSFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P +D+ + + RQA AIE + VI+F+VDG+
Sbjct: 62 ----EPE-RDDIIV----------------------KQMRRQANIAIETADVIVFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A LRK+ K ++L VNK +S ++ EF++LG P+ ISA G
Sbjct: 95 EGLTPADNEVAAMLRKS--KKPVVLVVNKVDSLKEE-DNAWEFYNLGIGDPVTISASQGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + K EEE+ IA++G+PNVGKSS++N L+GE+R IVS +
Sbjct: 152 GLGDMLDKVVENIDK----SVYEEEEDEYIRIAMIGKPNVGKSSLINKLLGEERVIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID+ + E KF LIDTAG+R+++ + E SV R + AI R+DV
Sbjct: 208 PGTTRDAIDS-YLETENGKFILIDTAGLRRKSKVKEE---IERYSVVRTYAAIERADVCI 263
Query: 463 LVIEAMACITEQ 474
L+I+A ITEQ
Sbjct: 264 LMIDATEGITEQ 275
>gi|20808046|ref|NP_623217.1| GTP-binding protein EngA [Thermoanaerobacter tengcongensis MB4]
gi|26006716|sp|Q8R9J1.1|DER_THETN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|20516626|gb|AAM24821.1| predicted GTPases [Thermoanaerobacter tengcongensis MB4]
Length = 439
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 140/310 (45%), Positives = 186/310 (60%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNR++ +IV D PGVTRDR+YG + W +F+LVDTGG+
Sbjct: 6 VAIVGRPNVGKSTLFNRILKRRISIVEDIPGVTRDRIYGNAEWLNRKFILVDTGGL---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
P+ + + S ++ Q AAIE + +I+F+VD + G
Sbjct: 62 --DPDPKDVIF-----------------------SKVKLQVEAAIEAADLILFVVDAREG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
L DEEIA+ LRK K +IL NK +S ++ +F+ LG P+PISA +G G
Sbjct: 97 LVPEDEEIANMLRKT--KKEVILVCNKVDSFKEMPASFYDFFKLGLGEPIPISASNGLGI 154
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GELLD V L E+ VE E IA++GRPNVGKSS++N ++GE+R IVS I G
Sbjct: 155 GELLDEVIKRL-----PENDVEYEEETIKIAVIGRPNVGKSSLVNRILGEERVIVSDIPG 209
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT FT +G+ + LIDTAGIR+++ I+ S E SV RA AI R+D+ L+
Sbjct: 210 TTRDAIDTPFT-KDGRNYILIDTAGIRRKSRISES---IERYSVLRALAAIERADICLLM 265
Query: 465 IEAMACITEQ 474
I+A TEQ
Sbjct: 266 IDATEGPTEQ 275
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 91/200 (45%), Gaps = 46/200 (23%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++GRPNVGKS+L NR++G R IV D PG TRD + ++L+DT G+
Sbjct: 178 KIAVIGRPNVGKSSLVNRILGEERVIVSDIPGTTRDAIDTPFTKDGRNYILIDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER----QATAAIEESCVIIFLV 280
S R+ IER +A AAIE + + + ++
Sbjct: 238 S-------------------------------RISESIERYSVLRALAAIERADICLLMI 266
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL--------GFS 332
D G T D +IA + +N K II+ VNK + K E+ + F+
Sbjct: 267 DATEGPTEQDTKIAGYAFEN--GKGIIILVNKWDIVEKDSNTYKEYTEMIREKLAFISFA 324
Query: 333 P-LPISAISGTGTGELLDLV 351
P L ISA +G ++L+ V
Sbjct: 325 PILFISAKTGQRIHKVLETV 344
>gi|447912883|ref|YP_007394295.1| GTP-binding protein EngA [Enterococcus faecium NRRL B-2354]
gi|445188592|gb|AGE30234.1| GTP-binding protein EngA [Enterococcus faecium NRRL B-2354]
Length = 436
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 186/314 (59%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYAKGEWLGREFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
+G E P M I+ QA AIEE+ VII +V
Sbjct: 62 ----------------DLGDE--------------PFMDQIKHQAEIAIEEADVIICVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L ++ +K +ILAVNK ++P + EF+SLG P PIS
Sbjct: 92 GREGVTDADEMVAKILYRS--NKPVILAVNKVDNPEMR-NDIYEFYSLGLGDPYPISGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD E K E E+++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGIGDILD----EAVKYFSEETEEEDDDTI-KFSLIGRPNVGKSSLINAILGEERVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F GQKF +IDTAG+RKR + + TE SV RA RAI RSDV
Sbjct: 204 DIEGTTRDAIDTHFVSESGQKFLMIDTAGMRKRGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 41/187 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R IV D G TRD + F E +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIVSDIEGTTRDAI-DTHFVSESGQKFLMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S V++ +++
Sbjct: 235 KRGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ +A + + + II+ VNK + +K + EF L ++P+
Sbjct: 268 EEGIREQDKRVAGYAHE--AGRGIIIVVNKWDLVKKETNTMRDFEQEIRDEFRYLDYAPI 325
Query: 335 P-ISAIS 340
+SA++
Sbjct: 326 VFVSAVT 332
>gi|227364908|ref|ZP_03848953.1| GTP-binding protein EngA [Lactobacillus reuteri MM2-3]
gi|325682467|ref|ZP_08161984.1| ribosome-associated GTPase EngA [Lactobacillus reuteri MM4-1A]
gi|227070055|gb|EEI08433.1| GTP-binding protein EngA [Lactobacillus reuteri MM2-3]
gi|324978306|gb|EGC15256.1| ribosome-associated GTPase EngA [Lactobacillus reuteri MM4-1A]
Length = 440
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 130/311 (41%), Positives = 187/311 (60%), Gaps = 42/311 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNR+ G +IV D PGVTRDR+Y + W F ++DTGG
Sbjct: 7 PIVAVVGRPNVGKSTLFNRIAGERISIVEDTPGVTRDRIYAHAEWLGKHFSMIDTGG--- 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + PL T+ I +QA AI+E+ VIIF+ D +
Sbjct: 64 -----------------IEISDQPLLTQ----------IRQQAEIAIDEADVIIFVADVE 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K ++LAVNK ++P + + +++SLG P +S++ G
Sbjct: 97 NGVTDADEQVARILYRS--NKPVVLAVNKVDNPERR-SDIYDYYSLGLGEPYAVSSVHGI 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V E ++ +E+ + +GRPNVGKSS++NA++GE+R IVS +
Sbjct: 154 GMGDLLDAVIKEFP-----DNAANDEDDSIHFSFIGRPNVGKSSLVNAILGENRVIVSNV 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAI+T+F +GQKF ++DTAGIRK+ I + TE S+ R+ RAI SDVV
Sbjct: 209 AGTTRDAINTQFETADGQKFTMVDTAGIRKKGKIYEN---TERYSLMRSMRAIDDSDVVL 265
Query: 463 LVIEAMACITE 473
+V+ A I E
Sbjct: 266 VVLNAEEGIRE 276
>gi|254478784|ref|ZP_05092152.1| putative GTPase [Carboxydibrachium pacificum DSM 12653]
gi|214035296|gb|EEB76002.1| putative GTPase [Carboxydibrachium pacificum DSM 12653]
Length = 439
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 140/310 (45%), Positives = 186/310 (60%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNR++ +IV D PGVTRDR+YG + W +F+LVDTGG+
Sbjct: 6 VAIVGRPNVGKSTLFNRILKRRISIVEDIPGVTRDRIYGNAEWLNRKFILVDTGGL---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
P+ + + S ++ Q AAIE + +I+F+VD + G
Sbjct: 62 --DPDPKDVIF-----------------------SKVKLQVEAAIEAADLILFVVDAREG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
L DEEIA+ LRK K +IL NK +S ++ +F+ LG P+PISA +G G
Sbjct: 97 LVPEDEEIANMLRKT--KKEVILVCNKVDSFKEMPASFYDFFKLGLGEPIPISASNGLGI 154
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GELLD V L E+ VE E IA++GRPNVGKSS++N ++GE+R IVS I G
Sbjct: 155 GELLDEVIKRL-----PENDVEYEEETIKIAVIGRPNVGKSSLVNRILGEERVIVSDIPG 209
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT FT +G+ + LIDTAGIR+++ I+ S E SV RA AI R+D+ L+
Sbjct: 210 TTRDAIDTPFT-KDGRNYILIDTAGIRRKSRISES---IERYSVLRALAAIERADICLLM 265
Query: 465 IEAMACITEQ 474
I+A TEQ
Sbjct: 266 IDATEGPTEQ 275
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 91/200 (45%), Gaps = 46/200 (23%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++GRPNVGKS+L NR++G R IV D PG TRD + ++L+DT G+
Sbjct: 178 KIAVIGRPNVGKSSLVNRILGEERVIVSDIPGTTRDAIDTPFTKDGRNYILIDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER----QATAAIEESCVIIFLV 280
S R+ IER +A AAIE + + + ++
Sbjct: 238 S-------------------------------RISESIERYSVLRALAAIERADICLLMI 266
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL--------GFS 332
D G T D +IA + +N K II+ VNK + K E+ + F+
Sbjct: 267 DATEGPTEQDTKIAGYAFEN--GKGIIILVNKWDIVEKDSNTYKEYTEMIREKLAFISFA 324
Query: 333 P-LPISAISGTGTGELLDLV 351
P L ISA +G ++L+ V
Sbjct: 325 PILFISAKTGQRIHKVLETV 344
>gi|148543995|ref|YP_001271365.1| GTP-binding protein EngA [Lactobacillus reuteri DSM 20016]
gi|184153389|ref|YP_001841730.1| GTP-binding protein EngA [Lactobacillus reuteri JCM 1112]
gi|194467923|ref|ZP_03073909.1| small GTP-binding protein [Lactobacillus reuteri 100-23]
gi|423332743|ref|ZP_17310525.1| GTP-binding protein [Lactobacillus reuteri ATCC 53608]
gi|166920101|sp|A5VJK4.1|DER_LACRD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|229784134|sp|B2G718.1|DER_LACRJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|148531029|gb|ABQ83028.1| small GTP-binding protein [Lactobacillus reuteri DSM 20016]
gi|183224733|dbj|BAG25250.1| GTP-binding protein [Lactobacillus reuteri JCM 1112]
gi|194452776|gb|EDX41674.1| small GTP-binding protein [Lactobacillus reuteri 100-23]
gi|337727861|emb|CCC02949.1| GTP-binding protein [Lactobacillus reuteri ATCC 53608]
Length = 437
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 130/311 (41%), Positives = 187/311 (60%), Gaps = 42/311 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNR+ G +IV D PGVTRDR+Y + W F ++DTGG
Sbjct: 4 PIVAVVGRPNVGKSTLFNRIAGERISIVEDTPGVTRDRIYAHAEWLGKHFSMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + PL T+ I +QA AI+E+ VIIF+ D +
Sbjct: 61 -----------------IEISDQPLLTQ----------IRQQAEIAIDEADVIIFVADVE 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K ++LAVNK ++P + + +++SLG P +S++ G
Sbjct: 94 NGVTDADEQVARILYRS--NKPVVLAVNKVDNPERR-SDIYDYYSLGLGEPYAVSSVHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V E ++ +E+ + +GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GMGDLLDAVIKEFP-----DNAANDEDDSIHFSFIGRPNVGKSSLVNAILGENRVIVSNV 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAI+T+F +GQKF ++DTAGIRK+ I + TE S+ R+ RAI SDVV
Sbjct: 206 AGTTRDAINTQFETADGQKFTMVDTAGIRKKGKIYEN---TERYSLMRSMRAIDDSDVVL 262
Query: 463 LVIEAMACITE 473
+V+ A I E
Sbjct: 263 VVLNAEEGIRE 273
>gi|227893492|ref|ZP_04011297.1| GTP-binding protein EngA [Lactobacillus ultunensis DSM 16047]
gi|227864717|gb|EEJ72138.1| GTP-binding protein EngA [Lactobacillus ultunensis DSM 16047]
Length = 435
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 136/314 (43%), Positives = 182/314 (57%), Gaps = 43/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F L+DTGG
Sbjct: 2 VLPVVAIVGRPNVGKSTLFNRIINQRLAIVEDKPGVTRDRNYAQAEWMGHKFDLIDTGG- 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
I EG ++ I QA AIEE+ VI+ L
Sbjct: 61 -------------------ITWEG----------GKIEEEIRAQAEIAIEEADVIVMLTS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+T DE +A L + K +ILAVNK ++P + + +F+SLG P+P+S+
Sbjct: 92 VVNHMTDLDERVAHLLYRT--KKPVILAVNKADNPEQR-NDIYDFYSLGLGDPIPVSSSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG G+LLD + + ED + + + +++GRPNVGKSSI+N L+GEDR IV+
Sbjct: 149 GTGIGDLLDEIVNNF-----PEDKDTQSEDVISFSVIGRPNVGKSSIVNKLLGEDRVIVA 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
GTTRDA+DT FT G K++++DTAGIR+R + TE SV RA AI RSDV
Sbjct: 204 NEEGTTRDAVDTPFT-KNGVKYKVVDTAGIRRRGKVYEK---TEKYSVLRAMSAIERSDV 259
Query: 461 VALVIEAMACITEQ 474
V LV++A I EQ
Sbjct: 260 VLLVLDASTGIREQ 273
>gi|289578647|ref|YP_003477274.1| ribosome-associated GTPase EngA [Thermoanaerobacter italicus Ab9]
gi|289528360|gb|ADD02712.1| ribosome-associated GTPase EngA [Thermoanaerobacter italicus Ab9]
Length = 439
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 193/312 (61%), Gaps = 45/312 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS LFN+++G +IV D+PGVTRDR+ G + W +F+LVDTGG+
Sbjct: 6 VSIVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRICGNAEWLNKKFILVDTGGL---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
P+ ED+ S + Q AAIE S VI+FLVD + G
Sbjct: 62 --DPD-AEDIIF----------------------SKVRLQVEAAIEASEVILFLVDAKEG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
L DEEIAD LR+ K IIL NK ++ ++ +F+SLG +P+PISA +G G
Sbjct: 97 LMPEDEEIADILRR--AKKEIILVCNKVDNFKELPPTYYDFFSLGLGNPIPISASNGLGI 154
Query: 345 GELLDLVCSELKK--VEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GELLD + +L + +E +E+ ++ IA++GRPNVGKSS++N ++GE+R IVS I
Sbjct: 155 GELLDEIVKKLPQEGLEYSEETIK-------IAVIGRPNVGKSSLVNKILGEERVIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F+ +G+ + LIDTAGIR+++ I+ S E SV RA AI RSD+
Sbjct: 208 PGTTRDAIDTPFS-KDGKNYVLIDTAGIRRKSRISES---IERYSVLRALTAIERSDICL 263
Query: 463 LVIEAMACITEQ 474
L+I+A+ EQ
Sbjct: 264 LMIDAIEGPAEQ 275
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 94/206 (45%), Gaps = 44/206 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++GRPNVGKS+L N+++G R IV D PG TRD + ++L+DT G+
Sbjct: 178 KIAVIGRPNVGKSSLVNKILGEERVIVSDIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER----QATAAIEESCVIIFLV 280
S R+ IER +A AIE S + + ++
Sbjct: 238 S-------------------------------RISESIERYSVLRALTAIERSDICLLMI 266
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGF-SPL 334
D G D +IA + +N K II+ VNK ++ +K V+E+ L F S
Sbjct: 267 DAIEGPAEQDTKIAGYAFEN--GKGIIIVVNKWDAIKKNNNTVNEYTKMIREKLSFISFA 324
Query: 335 PISAISGTGTGELLDLVCSELKKVEG 360
PI IS TG+ + V + KV G
Sbjct: 325 PILFISAK-TGQRVHRVLQTVDKVWG 349
>gi|297544868|ref|YP_003677170.1| ribosome-associated GTPase EngA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842643|gb|ADH61159.1| ribosome-associated GTPase EngA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 439
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 193/312 (61%), Gaps = 45/312 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS LFN+++G +IV D+PGVTRDR+ G + W +F+LVDTGG+
Sbjct: 6 VSIVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRICGNAEWLNKKFILVDTGGL---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
P+ ED+ S + Q AAIE S VI+FLVD + G
Sbjct: 62 --DPD-AEDIIF----------------------SKVRLQVEAAIEASEVILFLVDAKEG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
L DEEIAD LR+ K IIL NK ++ ++ +F+SLG +P+PISA +G G
Sbjct: 97 LMPEDEEIADILRR--AKKEIILVCNKVDNFKELPPTYYDFFSLGLGNPIPISASNGLGI 154
Query: 345 GELLDLVCSELKK--VEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GELLD + +L + +E +E+ ++ IA++GRPNVGKSS++N ++GE+R IVS I
Sbjct: 155 GELLDEIVKKLPQEGLEYSEETIK-------IAVIGRPNVGKSSLVNKILGEERVIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F+ +G+ + LIDTAGIR+++ I+ S E SV RA AI RSD+
Sbjct: 208 PGTTRDAIDTPFS-KDGKNYVLIDTAGIRRKSRISES---IERYSVLRALTAIERSDICL 263
Query: 463 LVIEAMACITEQ 474
L+I+A+ EQ
Sbjct: 264 LMIDAIEGPAEQ 275
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 94/206 (45%), Gaps = 44/206 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++GRPNVGKS+L N+++G R IV D PG TRD + ++L+DT G+
Sbjct: 178 KIAVIGRPNVGKSSLVNKILGEERVIVSDIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER----QATAAIEESCVIIFLV 280
S R+ IER +A AIE S + + ++
Sbjct: 238 S-------------------------------RISESIERYSVLRALTAIERSDICLLMI 266
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGF-SPL 334
D G D +IA + +N K II+ VNK ++ +K V+E+ L F S
Sbjct: 267 DAIEGPAEQDTKIAGYAFEN--GKGIIIVVNKWDAIKKNNNTVNEYTKMIREKLSFISFA 324
Query: 335 PISAISGTGTGELLDLVCSELKKVEG 360
PI IS TG+ + V + KV G
Sbjct: 325 PILFISAK-TGQRVHRVLQTVDKVWG 349
>gi|303232074|ref|ZP_07318777.1| ribosome-associated GTPase EngA [Veillonella atypica
ACS-049-V-Sch6]
gi|302513180|gb|EFL55219.1| ribosome-associated GTPase EngA [Veillonella atypica
ACS-049-V-Sch6]
Length = 444
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 191/312 (61%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W EF ++DTG
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTG---- 59
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
GI T + V +P M+ QA AIEE+ VI+F+VDG+
Sbjct: 60 ---------------------GIEFVTENSHV--IPKMMRLQAELAIEEADVILFVVDGK 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ ADEE+A+ LR + K ++L VNK +S + + EF++LG P+ ISA +
Sbjct: 97 QGIVPADEEVANILRTS--GKPVVLVVNKIDSVNQE-SNIYEFYNLGLGDPIGISAKNLM 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V GT V+EE+ I +AI+GRPNVGKSS+ NAL+G+DR IVS +
Sbjct: 154 NLGDLLDDTVKHFPPV-GTN--VDEEDTI-HVAIIGRPNVGKSSLTNALLGQDRVIVSDV 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+IDT +T + QKF LIDTAG+R+++ I + E S+ R+ R++ RSD+V
Sbjct: 210 AGTTRDSIDTHWTHGD-QKFVLIDTAGMRRKSKIDEA---VERYSIVRSLRSVDRSDIVV 265
Query: 463 LVIEAMACITEQ 474
LV++ + +TEQ
Sbjct: 266 LVLDGVDGVTEQ 277
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 34/180 (18%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
NV E VAI+GRPNVGKS+L N L+G +R IV D G TRD + G+ +F+L+
Sbjct: 172 NVDEEDTIHVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSIDTHWTHGDQKFVLI 231
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DT G+ SK I A ++ R + +++ S ++
Sbjct: 232 DTAGMRRKSK-------------------IDEAVERYSIVR--------SLRSVDRSDIV 264
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE--FWSLGF 331
+ ++DG G+T D++IA + + K +I+ VNK E K ++ +E + LGF
Sbjct: 265 VLVLDGVDGVTEQDKKIAGYAYE--AGKGVIIVVNKWDLVEKDDKTTLRYTEDIYDELGF 322
>gi|153816157|ref|ZP_01968825.1| hypothetical protein RUMTOR_02405 [Ruminococcus torques ATCC 27756]
gi|317500477|ref|ZP_07958701.1| GTP-binding protein engA [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089422|ref|ZP_08338321.1| GTP-binding protein engA [Lachnospiraceae bacterium 3_1_46FAA]
gi|336438827|ref|ZP_08618448.1| GTP-binding protein engA [Lachnospiraceae bacterium 1_1_57FAA]
gi|145846492|gb|EDK23410.1| ribosome biogenesis GTPase Der [Ruminococcus torques ATCC 27756]
gi|316898232|gb|EFV20279.1| GTP-binding protein engA [Lachnospiraceae bacterium 8_1_57FAA]
gi|330404790|gb|EGG84328.1| GTP-binding protein engA [Lachnospiraceae bacterium 3_1_46FAA]
gi|336017317|gb|EGN47079.1| GTP-binding protein engA [Lachnospiraceae bacterium 1_1_57FAA]
Length = 441
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 187/312 (59%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + EF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGEMISIVKDTPGVTRDRIYADVTWLDKEFTMIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK D+ + S + QA AI+ + VIIF+ D +
Sbjct: 64 DSK-------DIIL----------------------SQMREQAQIAIDTADVIIFITDVK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD ++AD LR++ K ++L VNK ++ K + V EF++LG P+PISA S
Sbjct: 95 QGLVDADSKVADMLRRS--GKPVVLVVNKVDNFDKYMADVYEFYNLGIGDPVPISAASRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD+V EG+ E+++R P +AIVG+PNVGKSSI+N L+GE+R IVS I
Sbjct: 153 GLGDMLDIVAENFP--EGSAQ-AEDDDR-PRVAIVGKPNVGKSSIINKLLGENRVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE G+++ IDTAG+R++ I E S+ R A+ R+DVV
Sbjct: 209 AGTTRDAIDTEIL-HNGKEYIFIDTAGLRRKNKIKEE---LERYSIIRTVTAVERADVVL 264
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 265 MVIDATEGVTEQ 276
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PRVAIVG+PNVGKS++ N+L+G NR IV D G TRD + E++ +DT G+
Sbjct: 178 PRVAIVGKPNVGKSSIINKLLGENRVIVSDIAGTTRDAIDTEILHNGKEYIFIDTAGL-- 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E+L + I + A+E + V++ ++D
Sbjct: 236 --RRKNKIKEELERYSII-----------------------RTVTAVERADVVLMVIDAT 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP----L 334
G+T D +IA + K +I+ VNK ++ K + E+ S L + P +
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGVIIVVNKWDAIEKNDRTMREYESDIRQVLSYMPYAEIM 328
Query: 335 PISAISGTGTGELLDLV 351
+SA +G L D++
Sbjct: 329 YVSAATGQRLNRLYDMI 345
>gi|309807087|ref|ZP_07701066.1| ribosome biogenesis GTPase Der [Lactobacillus iners LactinV 03V1-b]
gi|308166517|gb|EFO68717.1| ribosome biogenesis GTPase Der [Lactobacillus iners LactinV 03V1-b]
Length = 431
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 133/313 (42%), Positives = 185/313 (59%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+PGVTRDR+Y + W +F+LVDTGG+
Sbjct: 3 LPVVALVGRPNVGKSTIFNRIINSRVAIVEDQPGVTRDRIYANAQWMGKQFVLVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ N++E+ I+ QA AI E+ VI+ L D
Sbjct: 62 ---TFEDNVIEE--------------------------QIKTQAEIAINEADVIVLLSDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L K K IILA+NK ++P + + +F+SLG P+P+S G
Sbjct: 93 TGHVTNLDETIAKILYK--AKKPIILAINKADNPEQR-NDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + S+ T+D +N I +I+GRPNVGKSSI+N+++GE+R IV+
Sbjct: 150 TGLGDLLDAIVSKFNGNNTTDD----DNNI-RFSIIGRPNVGKSSIVNSILGENRVIVAD 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
+ GTTRDAIDT F +GQK+ ++DTAGIR++ + E SV R+ AI +SDV
Sbjct: 205 MEGTTRDAIDTIFE-KDGQKYTIVDTAGIRRKGKVYEK---VEKYSVMRSISAIEQSDVA 260
Query: 462 ALVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 261 IIVIDASVGIIEQ 273
>gi|312128144|ref|YP_003993018.1| ribosome-associated gtpase enga [Caldicellulosiruptor
hydrothermalis 108]
gi|311778163|gb|ADQ07649.1| ribosome-associated GTPase EngA [Caldicellulosiruptor
hydrothermalis 108]
Length = 440
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 190/312 (60%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL+G RAIV D PG+TRDR+ G + W F ++DTGG+
Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIIGETEWRGITFNVIDTGGIEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S ED+ + + RQA AI+ S VIIF+VDG+
Sbjct: 63 YS-------EDIIL----------------------KQMRRQAQFAIDMSDVIIFMVDGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A+ LR + K I+LAVNK ++ + M + EF+ LG S P+ +SA GT
Sbjct: 94 TGLTDADREVANMLRTS--KKPIVLAVNKIDNISQQAM-IYEFYELGLSDPIAMSAEHGT 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + L K EG ++ EE I +AI+G+PN GKSS++N ++GE+R IVS I
Sbjct: 151 GVGDVLDAVVNYLNK-EGINEI--EEGTI-KVAIIGKPNTGKSSLVNYILGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID+ F EG LIDTAG+R+++ I + E S+ R +AI RSD+
Sbjct: 207 PGTTRDAIDSTFEF-EGIPITLIDTAGLRRKSKIYDN---VERYSMLRTLQAIERSDICI 262
Query: 463 LVIEAMACITEQ 474
++++ ++EQ
Sbjct: 263 ILLDGTENVSEQ 274
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 89/205 (43%), Gaps = 54/205 (26%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PN GKS+L N ++G R IV D PG TRD
Sbjct: 177 KVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRD------------------------ 212
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMI----ER----QATAAIEESCVI 276
AI +T EGIP+ + A R S I ER + AIE S +
Sbjct: 213 -----------AIDSTFEFEGIPITLIDTAGLRRKSKIYDNVERYSMLRTLQAIERSDIC 261
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-------- 328
I L+DG ++ D ++A + + K I+AVNK ++ K E+
Sbjct: 262 IILLDGTENVSEQDAKVAGYAYE--AGKGCIVAVNKWDAVEKDEKTADEYKKQIEEKLSF 319
Query: 329 LGFSP-LPISAISGTGTGELLDLVC 352
L F+P L ISA +G +LL+ V
Sbjct: 320 LKFAPVLFISAKTGFRVKKLLETVL 344
>gi|312869092|ref|ZP_07729266.1| ribosome biogenesis GTPase Der [Lactobacillus oris PB013-T2-3]
gi|417885441|ref|ZP_12529595.1| ribosome biogenesis GTPase Der [Lactobacillus oris F0423]
gi|311095338|gb|EFQ53608.1| ribosome biogenesis GTPase Der [Lactobacillus oris PB013-T2-3]
gi|341595363|gb|EGS38012.1| ribosome biogenesis GTPase Der [Lactobacillus oris F0423]
Length = 437
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 131/311 (42%), Positives = 186/311 (59%), Gaps = 42/311 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G +IV D PGVTRDR+Y W F ++DTGG
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGERISIVEDTPGVTRDRIYAHGEWLGKNFNMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + PL T+ I +QA AI+E+ VI+ +VD +
Sbjct: 61 -----------------IELSDQPLLTQ----------IRQQAEIAIDEADVIVLVVDVE 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+G+T ADE++A L ++ +K ++LAVNK ++P + + +F+SLG P P+S++ G
Sbjct: 94 SGVTDADEQVARILYRS--NKPVVLAVNKVDNPERR-NDIYDFYSLGLGEPYPVSSVHGV 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V E+ E++ +++GRPNVGKSS++N ++GE+R IVS +
Sbjct: 151 GLGDLLDAVIHNFP-----ENAANEDDDSIRFSLIGRPNVGKSSLVNGILGENRVIVSNM 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAI+T F +GQ+F +IDTAGIRK+ I + TE ++ RA RAI SDVV
Sbjct: 206 AGTTRDAINTRFVAKDGQEFTMIDTAGIRKQGKIYEN---TERYALMRAMRAIDGSDVVL 262
Query: 463 LVIEAMACITE 473
+V+ A I E
Sbjct: 263 VVLNAEEGIRE 273
>gi|282848929|ref|ZP_06258319.1| ribosome-associated GTPase EngA [Veillonella parvula ATCC 17745]
gi|282581434|gb|EFB86827.1| ribosome-associated GTPase EngA [Veillonella parvula ATCC 17745]
Length = 444
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 191/312 (61%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W EF ++DTG
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTG---- 59
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
GI T + V +P M+ QA AIEE+ VI+F+VDG+
Sbjct: 60 ---------------------GIEFITENSHV--IPKMMRLQAELAIEEADVILFVVDGK 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ ADEE+A+ LR + K ++L VNK +S + + EF++LG P+ ISA +
Sbjct: 97 QGIVPADEEVANILRAS--GKPVVLVVNKIDSVNQE-PNIYEFYNLGLGDPIGISAKNLM 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V GT V++E+ I +AI+GRPNVGKSS+ NAL+G+DR IVS +
Sbjct: 154 NLGDLLDDTVKHFPPV-GTN--VDDEDTI-HVAIIGRPNVGKSSLTNALLGQDRVIVSDV 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+IDT +T E QKF LIDTAG+R+++ I + E S+ R+ R++ R+D+V
Sbjct: 210 AGTTRDSIDTYWTH-ENQKFVLIDTAGMRRKSKIEEA---VERYSIVRSLRSVDRADIVV 265
Query: 463 LVIEAMACITEQ 474
LV++A +TEQ
Sbjct: 266 LVLDAQDGVTEQ 277
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 38/182 (20%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFM 214
NV + VAI+GRPNVGKS+L N L+G +R IV D G TRD + ++W +F+
Sbjct: 172 NVDDEDTIHVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSI--DTYWTHENQKFV 229
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ SK E AV R + ++ +++ +
Sbjct: 230 LIDTAGMRRKSKI------------------------EEAVERYSIV---RSLRSVDRAD 262
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE--FWSL 329
+++ ++D Q G+T D++IA + + K +++ VNK E K ++ +E + L
Sbjct: 263 IVVLVLDAQDGVTEQDKKIAGYAYE--AGKGVVIVVNKWDLVEKDDKTTLRFTEDIYDEL 320
Query: 330 GF 331
GF
Sbjct: 321 GF 322
>gi|167747191|ref|ZP_02419318.1| hypothetical protein ANACAC_01905 [Anaerostipes caccae DSM 14662]
gi|317473608|ref|ZP_07932897.1| ribosome-associated GTPase EngA [Anaerostipes sp. 3_2_56FAA]
gi|167654151|gb|EDR98280.1| ribosome biogenesis GTPase Der [Anaerostipes caccae DSM 14662]
gi|316898898|gb|EFV20923.1| ribosome-associated GTPase EngA [Anaerostipes sp. 3_2_56FAA]
Length = 440
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 182/312 (58%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G N +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNALAGENISIVKDTPGVTRDRIYADISWLNYNFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ + + ++RM QA AIE + VIIFLVD +
Sbjct: 62 ----EPD-------------------SGDVILSRM----REQAQIAIETADVIIFLVDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD ++AD LR++ K ++LAVNK ++ K + EF++LG P P+SA S
Sbjct: 95 QGLVDADFQVADMLRRS--QKPVVLAVNKADNYEKFLPDTYEFYNLGLGDPHPVSANSKL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + L EEE+ P IAI+G+PN GKSSI+N ++GE+R IVS +
Sbjct: 153 GFGDLLDEVVENCD----PKALEEEEDERPKIAIIGKPNAGKSSIINKMLGEERVIVSDV 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT G+++ IDTAG+R++ I E SV R A+ R DV
Sbjct: 209 AGTTRDAIDT-VIQKNGKEYVFIDTAGLRRKNKIKED---LERYSVIRTVSAVERCDVAV 264
Query: 463 LVIEAMACITEQ 474
LVI+A ITEQ
Sbjct: 265 LVIDATEGITEQ 276
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 29/163 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P++AI+G+PN GKS++ N+++G R IV D G TRD + E++ +DT G+
Sbjct: 178 PKIAIIGKPNAGKSSIINKMLGEERVIVSDVAGTTRDAIDTVIQKNGKEYVFIDTAGL-- 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I EDL + I + +A+E V + ++D
Sbjct: 236 --RRKNKIKEDLERYSVI-----------------------RTVSAVERCDVAVLVIDAT 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+T D +IA + K +I+AVNK + K + +F
Sbjct: 271 EGITEQDAKIAGIAHER--GKGMIIAVNKWDLVEKDDKTIYKF 311
>gi|293568055|ref|ZP_06679393.1| GTP-binding protein EngA [Enterococcus faecium E1071]
gi|406579883|ref|ZP_11055108.1| GTP-binding protein Der [Enterococcus sp. GMD4E]
gi|406582106|ref|ZP_11057237.1| GTP-binding protein Der [Enterococcus sp. GMD3E]
gi|406584393|ref|ZP_11059425.1| GTP-binding protein Der [Enterococcus sp. GMD2E]
gi|406589249|ref|ZP_11063691.1| GTP-binding protein Der [Enterococcus sp. GMD1E]
gi|410935883|ref|ZP_11367757.1| GTP-binding protein Der [Enterococcus sp. GMD5E]
gi|427395180|ref|ZP_18888102.1| GTPase Der [Enterococcus durans FB129-CNAB-4]
gi|430844531|ref|ZP_19462429.1| GTPase Der [Enterococcus faecium E1050]
gi|430861942|ref|ZP_19479294.1| GTPase Der [Enterococcus faecium E1573]
gi|430958938|ref|ZP_19486802.1| GTPase Der [Enterococcus faecium E1576]
gi|431010091|ref|ZP_19489616.1| GTPase Der [Enterococcus faecium E1578]
gi|431228355|ref|ZP_19501496.1| GTPase Der [Enterococcus faecium E1622]
gi|431259184|ref|ZP_19505361.1| GTPase Der [Enterococcus faecium E1623]
gi|291589276|gb|EFF21086.1| GTP-binding protein EngA [Enterococcus faecium E1071]
gi|404454822|gb|EKA01722.1| GTP-binding protein Der [Enterococcus sp. GMD4E]
gi|404458510|gb|EKA04931.1| GTP-binding protein Der [Enterococcus sp. GMD3E]
gi|404464202|gb|EKA09759.1| GTP-binding protein Der [Enterococcus sp. GMD2E]
gi|404471218|gb|EKA15770.1| GTP-binding protein Der [Enterococcus sp. GMD1E]
gi|410735682|gb|EKQ77589.1| GTP-binding protein Der [Enterococcus sp. GMD5E]
gi|425724316|gb|EKU87200.1| GTPase Der [Enterococcus durans FB129-CNAB-4]
gi|430497121|gb|ELA73180.1| GTPase Der [Enterococcus faecium E1050]
gi|430549233|gb|ELA89065.1| GTPase Der [Enterococcus faecium E1573]
gi|430556623|gb|ELA96120.1| GTPase Der [Enterococcus faecium E1576]
gi|430560586|gb|ELA99882.1| GTPase Der [Enterococcus faecium E1578]
gi|430574657|gb|ELB13420.1| GTPase Der [Enterococcus faecium E1622]
gi|430577279|gb|ELB15884.1| GTPase Der [Enterococcus faecium E1623]
Length = 436
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 142/314 (45%), Positives = 186/314 (59%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYAKGEWLGREFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
+G E P M I+ QA AIEE+ VII +V
Sbjct: 62 ----------------DLGDE--------------PFMDQIKHQAEIAIEEADVIICVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L ++ +K +ILAVNK ++P + EF+SLG P PIS
Sbjct: 92 GREGVTDADEMVAKILYRS--NKPVILAVNKVDNPEMR-NDIYEFYSLGLGDPYPISGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD E K E E+++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGIGDILD----EAVKYFSEETEEEDDDTI-KFSLIGRPNVGKSSLINAILGEERVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F GQKF +IDTAG+RKR + + TE SV RA RAI RSD+
Sbjct: 204 DIEGTTRDAIDTHFVSESGQKFLMIDTAGMRKRGKVYEN---TEKYSVMRAMRAIDRSDI 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 41/187 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R IV D G TRD + F E +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIVSDIEGTTRDAI-DTHFVSESGQKFLMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KRGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ +A + + + II+ VNK + +K + EF L ++P+
Sbjct: 268 EEGIREQDKRVAGYAHE--AGRGIIIVVNKWDLVKKETNTMRDFEQEIRDEFRYLDYAPI 325
Query: 335 P-ISAIS 340
+SA++
Sbjct: 326 VFVSAVT 332
>gi|374579680|ref|ZP_09652774.1| ribosome-associated GTPase EngA [Desulfosporosinus youngiae DSM
17734]
gi|374415762|gb|EHQ88197.1| ribosome-associated GTPase EngA [Desulfosporosinus youngiae DSM
17734]
Length = 443
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 189/312 (60%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ GG AIV + PGVTRDR+Y + W +F L+DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRITGGLVAIVENMPGVTRDRLYRDAEWLGRKFSLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
EG P++ S + RQA A+EE+ VIIF+VD Q
Sbjct: 62 ----------------EFKDEGTPIS----------SQMRRQAEIAMEEADVIIFVVDAQ 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
T D+ IA LR++ K ++LA NK E K Q+ +F SLG +PISA+ G
Sbjct: 96 ISPTPDDDIIARTLRRS--GKPVLLAANKVEDFAKIEGQLYDFLSLGLGEAIPISAVHGM 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
TG+LLDLV S L + + E + + I+++GRPNVGKSS++N L+G++R IVS +
Sbjct: 154 NTGDLLDLVISNLPEDDEE----EYDPDVIRISVIGRPNVGKSSLVNTLLGKERVIVSNV 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F EG+ + LIDTAG+R++A I TE SV R+ RA+ RSD +
Sbjct: 210 PGTTRDAIDTPFEH-EGRHYILIDTAGMRRKARIE---ELTEQYSVVRSLRAVDRSDAIL 265
Query: 463 LVIEAMACITEQ 474
++I+A+ +TEQ
Sbjct: 266 MLIDAVDGVTEQ 277
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
R++++GRPNVGKS+L N L+G R IV + PG TRD + F EHE ++L+DT G+
Sbjct: 180 RISVIGRPNVGKSSLVNTLLGKERVIVSNVPGTTRDAI-DTPF--EHEGRHYILIDTAGM 236
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
++ +E+L T + +V R + A++ S I+ L+D
Sbjct: 237 RRKAR-----IEEL--------------TEQYSVVR--------SLRAVDRSDAILMLID 269
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGF---SP 333
G+T D++IA + + K IIL VNK + K +++F LGF +P
Sbjct: 270 AVDGVTEQDKKIAGY--ADEAGKAIILIVNKWDLIEKDEKTINKFEKSIREELGFMQYAP 327
Query: 334 -LPISAISGTGTGELLDLV 351
+ ISA +G ++LDLV
Sbjct: 328 TMFISAKTGQRVNKILDLV 346
>gi|158320432|ref|YP_001512939.1| GTP-binding protein EngA [Alkaliphilus oremlandii OhILAs]
gi|166920096|sp|A8MH56.1|DER_ALKOO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|158140631|gb|ABW18943.1| small GTP-binding protein [Alkaliphilus oremlandii OhILAs]
Length = 440
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 131/312 (41%), Positives = 188/312 (60%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ G +IV ++PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 4 PIVAVVGRPNVGKSTLFNKIAGERISIVENKPGVTRDRIYAEAEWLNYQFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P E + P+ + RQA A+E + VIIF+VDG+
Sbjct: 62 ----EPESEEII-----------------------PAQMRRQAELAMETANVIIFVVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT+ D ++A+ LRK K +I+ +NK ++ R EF+ LG P+ ISA G
Sbjct: 95 EGLTSVDRDVAELLRKT--KKPVIVTLNKVDT-RHQSEHFYEFYELGMGDPIEISASLGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V ED + ++ + +A++G+PNVGKSS++N ++GE+R IVS I
Sbjct: 152 GIGDLLDEVVKNF----NPEDYNQYDDDVIKVAMIGKPNVGKSSLINRILGEERVIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT FT + ++ LIDTAGIR+++ I S E S+ RA A+ +SDV
Sbjct: 208 AGTTRDAIDTPFTDGD-DRYVLIDTAGIRRKSRITES---IEKYSIVRAIAAVEKSDVCL 263
Query: 463 LVIEAMACITEQ 474
LVI+A +TEQ
Sbjct: 264 LVIDASEGVTEQ 275
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 43/231 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA++G+PNVGKS+L NR++G R IV D G TRD + G+ ++L+DT G+
Sbjct: 178 KVAMIGKPNVGKSSLINRILGEERVIVSDIAGTTRDAIDTPFTDGDDRYVLIDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
S+ IT +I + ++ R A AA+E+S V + ++D
Sbjct: 238 SR----------ITESI---------EKYSIVR--------AIAAVEKSDVCLLVIDASE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------LGFSPLPISA 338
G+T D++IA + +N K +++ VNK + K ++EF S PI
Sbjct: 271 GVTEQDKKIAGYSHEN--GKGMVIVVNKWDIIEKDNHTMNEFIKEIRNELTYISYAPIVF 328
Query: 339 ISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILN 389
+S TG+ ++ + E+K V + RIP A+ +G++ +LN
Sbjct: 329 VSAL-TGQRMNKILEEVKHVSNQNAM-----RIPTGAL--NEVIGEAILLN 371
>gi|417837660|ref|ZP_12483898.1| GTP-binding protein EngA [Lactobacillus johnsonii pf01]
gi|338761203|gb|EGP12472.1| GTP-binding protein EngA [Lactobacillus johnsonii pf01]
Length = 435
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 135/313 (43%), Positives = 182/313 (58%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+ GVTRDR+Y R+ W HEF+L+DTGG
Sbjct: 3 LPVVALVGRPNVGKSTIFNRIINSRVAIVEDKAGVTRDRIYARAEWMGHEFILIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I L + E + I+ QA AI+E+ VI+ L D
Sbjct: 61 -----------------------ITLDSGE-----IEEQIKAQAEIAIDEADVIVMLGDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K +ILA+NK ++P + + +F+SLG P+P+S G
Sbjct: 93 TQHMTNMDETIAKMLYRT--KKPVILAINKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + E G + E+ I +++GRPNVGKSS++N ++GE R IVS
Sbjct: 150 TGMGDLLDAIVGEF----GDKANQHEDGSI-RFSVIGRPNVGKSSLVNTILGEQRVIVSN 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRDAIDT FT +GQK+ ++DTAGIR+R + TE SV RA AI SD+
Sbjct: 205 IEGTTRDAIDTTFTN-DGQKYTIVDTAGIRRRGKVYEK---TEKYSVLRAISAIEESDIT 260
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 261 LLVLDASTGIREQ 273
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N ++G R IV + G TRD + ++ +VDT G+
Sbjct: 176 RFSVIGRPNVGKSSLVNTILGEQRVIVSNIEGTTRDAIDTTFTNDGQKYTIVDTAGI--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A +AIEES + + ++D
Sbjct: 233 -RRRGKVYE---------------KTEKYSVLR--------AISAIEESDITLLVLDAST 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP- 335
G+ D+ +A + + +I+ VNK + P+K + EF L ++P+
Sbjct: 269 GIREQDKHVAGYAHD--AGRGVIIVVNKWDLPKKDSRSMKDFEDTIRREFQYLDYAPIIF 326
Query: 336 ISAISGTGTGELLDLVC----SELKKVEGT--EDLVEEENRIPAIAIV 377
+SA +G ++L LV ++ ++++ + DL+ E RI +V
Sbjct: 327 VSAKTGQRVPDILKLVKEVHENQTRRIQSSVLNDLLLEATRITPTPLV 374
>gi|307244110|ref|ZP_07526228.1| ribosome-associated GTPase EngA [Peptostreptococcus stomatis DSM
17678]
gi|306492481|gb|EFM64516.1| ribosome-associated GTPase EngA [Peptostreptococcus stomatis DSM
17678]
Length = 442
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 188/312 (60%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS +FN+L G +IV D PGVTRDR++G W F ++DTGG+
Sbjct: 7 PIVAVVGRPNVGKSTIFNKLTGTKISIVEDTPGVTRDRIFGEVEWLNKYFTIIDTGGI-- 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P +D+ + S + QA A++ + VI+F+VDG+
Sbjct: 65 ----EPE-SDDIIL----------------------SQMRNQAMLAVDMAHVILFVVDGK 97
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
+GLTAAD+E+AD LR+ K ++L VNK +S + V +F+ LG +P+ IS +
Sbjct: 98 SGLTAADKEVADILRRT--KKPVLLVVNKIDS-KSQFDNVYDFYELGLGNPIAISGANSM 154
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V EG +E+ + +AI G+PN GKSSILN ++GE+R IVSPI
Sbjct: 155 GLGDLLDEVVENFP--EGMNTEYDED--VIRVAITGKPNAGKSSILNNILGEERVIVSPI 210
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F + KF LIDTAGIR+R+ + + E SV R+ A+ R+DVV
Sbjct: 211 AGTTRDAIDTYFE-KDDNKFLLIDTAGIRRRSKVYEN---VERFSVIRSMSAVDRADVVL 266
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 267 IVIDATEGVTEQ 278
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVAI G+PN GKS++ N ++G R IV G TRD + +++F+L+DT G+
Sbjct: 181 RVAITGKPNAGKSSILNNILGEERVIVSPIAGTTRDAIDTYFEKDDNKFLLIDTAGIRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK N+ R + + M +A++ + V++ ++D
Sbjct: 241 SKVYENV------------------ERFSVIRSM---------SAVDRADVVLIVIDATE 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGI----MQVSE-FWSLGFSP-LP 335
G+T D +IA K I VNK E K + M V E F + ++P L
Sbjct: 274 GVTEQDTKIAGIAHDE--GKACIFVVNKWDLIEKDNKTMGNFRMSVREKFPFMTYAPILF 331
Query: 336 ISAISGTGTGELLDLVC 352
+SA+S G++L+ V
Sbjct: 332 VSAVSNQRIGKILETVV 348
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 368 ENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDT 427
+NR P +A+VGRPNVGKS+I N L G +IV G TRD I E + F +IDT
Sbjct: 4 DNR-PIVAVVGRPNVGKSTIFNKLTGTKISIVEDTPGVTRDRIFGEVEWL-NKYFTIIDT 61
Query: 428 AGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACIT 472
GI S + N+A A+ + V+ V++ + +T
Sbjct: 62 GGIE-----PESDDIILSQMRNQAMLAVDMAHVILFVVDGKSGLT 101
>gi|303229883|ref|ZP_07316659.1| ribosome-associated GTPase EngA [Veillonella atypica
ACS-134-V-Col7a]
gi|302515439|gb|EFL57405.1| ribosome-associated GTPase EngA [Veillonella atypica
ACS-134-V-Col7a]
Length = 444
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 191/312 (61%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W EF ++DTG
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTG---- 59
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
GI T + V +P M+ QA AIEE+ VI+F+VDG+
Sbjct: 60 ---------------------GIEFVTENSHV--IPKMMRLQAELAIEEADVILFVVDGK 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ ADEE+A+ LR + K ++L VNK +S + + EF++LG P+ ISA +
Sbjct: 97 QGIVPADEEVANILRTS--GKPVVLVVNKIDSVNQE-PNIYEFYNLGLGDPIGISAKNLM 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V GT V+EE+ I +AI+GRPNVGKSS+ NAL+G+DR IVS +
Sbjct: 154 NLGDLLDDTVKHFPPV-GTN--VDEEDTI-HVAIIGRPNVGKSSLTNALLGQDRVIVSDV 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+IDT +T + QKF LIDTAG+R+++ I + E S+ R+ R++ RSD+V
Sbjct: 210 AGTTRDSIDTHWTHGD-QKFVLIDTAGMRRKSKIDEA---VERYSIVRSLRSVDRSDIVV 265
Query: 463 LVIEAMACITEQ 474
LV++ + +TEQ
Sbjct: 266 LVLDGVDGVTEQ 277
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 34/180 (18%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
NV E VAI+GRPNVGKS+L N L+G +R IV D G TRD + G+ +F+L+
Sbjct: 172 NVDEEDTIHVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSIDTHWTHGDQKFVLI 231
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DT G+ SK I A ++ R + +++ S ++
Sbjct: 232 DTAGMRRKSK-------------------IDEAVERYSIVR--------SLRSVDRSDIV 264
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE--FWSLGF 331
+ ++DG G+T D++IA + + K +I+ VNK E K ++ +E + LGF
Sbjct: 265 VLVLDGVDGVTEQDKKIAGYAYE--AGKGVIIVVNKWDLVEKDDKTTLRYTEDIYDELGF 322
>gi|429759353|ref|ZP_19291852.1| ribosome biogenesis GTPase Der [Veillonella atypica KON]
gi|429179629|gb|EKY20868.1| ribosome biogenesis GTPase Der [Veillonella atypica KON]
Length = 454
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 191/312 (61%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W EF ++DTG
Sbjct: 14 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTG---- 69
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
GI T + V +P M+ QA AIEE+ VI+F+VDG+
Sbjct: 70 ---------------------GIEFVTENSHV--IPKMMRLQAELAIEEADVILFVVDGK 106
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ ADEE+A+ LR + K ++L VNK +S + + EF++LG P+ ISA +
Sbjct: 107 QGIVPADEEVANILRTS--GKPVVLVVNKIDSVNQE-PNIYEFYNLGLGDPIGISAKNLM 163
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V GT V+EE+ I +AI+GRPNVGKSS+ NAL+G+DR IVS +
Sbjct: 164 NLGDLLDDTVKHFPPV-GTN--VDEEDTI-HVAIIGRPNVGKSSLTNALLGQDRVIVSDV 219
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+IDT +T + QKF LIDTAG+R+++ I + E S+ R+ R++ RSD+V
Sbjct: 220 AGTTRDSIDTHWTHGD-QKFVLIDTAGMRRKSKIDEA---VERYSIVRSLRSVDRSDIVV 275
Query: 463 LVIEAMACITEQ 474
LV++ + +TEQ
Sbjct: 276 LVLDGVDGVTEQ 287
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 34/180 (18%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
NV E VAI+GRPNVGKS+L N L+G +R IV D G TRD + G+ +F+L+
Sbjct: 182 NVDEEDTIHVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSIDTHWTHGDQKFVLI 241
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DT G+ SK I A ++ R + +++ S ++
Sbjct: 242 DTAGMRRKSK-------------------IDEAVERYSIVR--------SLRSVDRSDIV 274
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE--FWSLGF 331
+ ++DG G+T D++IA + + K +I+ VNK E K ++ +E + LGF
Sbjct: 275 VLVLDGVDGVTEQDKKIAGYAYE--AGKGVIIVVNKWDLVEKDDKTTLRYTEDIYDELGF 332
>gi|350270470|ref|YP_004881778.1| GTPase [Oscillibacter valericigenes Sjm18-20]
gi|348595312|dbj|BAK99272.1| GTPase [Oscillibacter valericigenes Sjm18-20]
Length = 441
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 185/312 (59%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L+G +IV D PGVTRDR+YG + W F L+DTGG+
Sbjct: 3 PIVAIVGRPNVGKSMLFNKLIGRRLSIVEDTPGVTRDRIYGETDWNGRAFTLIDTGGIEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ Q + + + +QA AI+ + VIIFL D +
Sbjct: 63 RTDDQ-----------------------------ILTFMRQQAQLAIDHATVIIFLTDVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTA+D E+A L ++ K I+LAVNK +S EF++LG P+ +SA+ G
Sbjct: 94 TGLTASDHEVAGMLLRS--GKPIVLAVNKMDSTGTVNPDFYEFYNLGLGDPIAVSAVHGH 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD C L + E +E+N +A++G+PNVGKSS+LN ++GE+R+IVS +
Sbjct: 152 GTGDLLD-ACVRLFPPQEEE---KEDNDAIKVALIGKPNVGKSSLLNRILGEERSIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAID+ F +G KF IDTAG+RK++ + E SV RA AI RSDV
Sbjct: 208 AGTTRDAIDSLFENKQG-KFLFIDTAGMRKKSKVDED---IEKYSVLRATMAIERSDVCL 263
Query: 463 LVIEAMACITEQ 474
++I+ +TEQ
Sbjct: 264 ILIDGRDGVTEQ 275
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 38/198 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA++G+PNVGKS+L NR++G R+IV D G TRD + + +F+ +DT G+
Sbjct: 178 KVALIGKPNVGKSSLLNRILGEERSIVSDVAGTTRDAIDSLFENKQGKFLFIDTAGMRKK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK +I + +V R AT AIE S V + L+DG+
Sbjct: 238 SKVDEDI-------------------EKYSVLR--------ATMAIERSDVCLILIDGRD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGF---SP-LP 335
G+T D ++A + K I+ VNK + K + + + LGF +P L
Sbjct: 271 GVTEQDTKVAGLAHE--AGKASIIVVNKWDLVDKDDKTMDKLTADIRRDLGFMTYAPVLF 328
Query: 336 ISAISGTGTGELLDLVCS 353
ISA++G +L +L+ +
Sbjct: 329 ISALTGQRVEKLFELIVA 346
>gi|222528757|ref|YP_002572639.1| GTP-binding protein EngA [Caldicellulosiruptor bescii DSM 6725]
gi|222455604|gb|ACM59866.1| small GTP-binding protein [Caldicellulosiruptor bescii DSM 6725]
Length = 440
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 190/312 (60%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL+G RAIV D PG+TRDR+ G + W F ++DTGG+
Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIIGETEWRGITFNVIDTGGIEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S ED+ + + RQA AI+ S VIIF+VDG+
Sbjct: 63 YS-------EDIIL----------------------KQMRRQAQFAIDMSDVIIFMVDGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A+ LR + K I+LAVNK ++ + M + EF+ LG S P+ +SA GT
Sbjct: 94 TGLTDADREVANMLRTS--KKPIVLAVNKIDNISQQAM-IYEFYELGLSDPIAMSAEHGT 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + L K EG ++ EE I +AI+G+PN GKSS++N ++GE+R IVS I
Sbjct: 151 GVGDVLDAVVNYLNK-EGINEI--EEGTI-KVAIIGKPNTGKSSLVNYILGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID+ F EG LIDTAG+R+++ I + E S+ R +AI RSD+
Sbjct: 207 PGTTRDAIDSTFEF-EGIPITLIDTAGLRRKSKIYDN---VERYSMLRTLQAIERSDICI 262
Query: 463 LVIEAMACITEQ 474
++++ ++EQ
Sbjct: 263 ILLDGTENVSEQ 274
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 89/204 (43%), Gaps = 54/204 (26%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PN GKS+L N ++G R IV D PG TRD
Sbjct: 177 KVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRD------------------------ 212
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMI----ER----QATAAIEESCVI 276
AI +T EGIP+ + A R S I ER + AIE S +
Sbjct: 213 -----------AIDSTFEFEGIPITLIDTAGLRRKSKIYDNVERYSMLRTLQAIERSDIC 261
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-------- 328
I L+DG ++ D ++A + + K I+AVNK ++ K E+
Sbjct: 262 IILLDGTENVSEQDAKVAGYAYE--AGKGCIVAVNKWDAVEKDEKTADEYKKQIEEKLSF 319
Query: 329 LGFSP-LPISAISGTGTGELLDLV 351
L F+P L ISA +G +LL+ V
Sbjct: 320 LKFAPVLFISAKTGFRVKKLLETV 343
>gi|325912018|ref|ZP_08174420.1| ribosome biogenesis GTPase Der [Lactobacillus iners UPII 143-D]
gi|325476203|gb|EGC79367.1| ribosome biogenesis GTPase Der [Lactobacillus iners UPII 143-D]
Length = 435
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 133/313 (42%), Positives = 185/313 (59%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+PGVTRDR+Y + W +F+LVDTGG+
Sbjct: 3 LPVVALVGRPNVGKSTIFNRIINSRVAIVEDQPGVTRDRIYANAQWMGKQFVLVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ N++E+ I+ QA AI E+ VI+ L D
Sbjct: 62 ---TFEDNVIEE--------------------------QIKTQAEIAINEADVIVLLSDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L K K IILA+NK ++P + + +F+SLG P+P+S G
Sbjct: 93 TGHVTNLDETIAKILYK--AKKPIILAINKADNPEQR-NDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + S+ T+D +N I +I+GRPNVGKSSI+N+++GE+R IV+
Sbjct: 150 TGLGDLLDAIVSKFNGNNTTDD----DNNI-RFSIIGRPNVGKSSIVNSILGENRVIVAD 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
+ GTTRDAIDT F +GQK+ ++DTAGIR++ + E SV R+ AI +SDV
Sbjct: 205 MEGTTRDAIDTIFE-KDGQKYTIVDTAGIRRKGKVYEK---VEKYSVMRSISAIEQSDVA 260
Query: 462 ALVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 261 IIVIDASVGIIEQ 273
>gi|310659189|ref|YP_003936910.1| GTPase involved in ribosome synthesis and maintenance
[[Clostridium] sticklandii]
gi|308825967|emb|CBH22005.1| GTPase involved in ribosome synthesis and maintenance
[[Clostridium] sticklandii]
Length = 438
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 135/315 (42%), Positives = 192/315 (60%), Gaps = 47/315 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G AIV D PGVTRDR+Y ++ W F ++DTGG+
Sbjct: 3 PIVAIVGRPNVGKSTLFNRIAGERIAIVEDTPGVTRDRIYAQAEWVSKHFTIIDTGGI-- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ E+L +P + +QA A++ + VI+F+VDG+
Sbjct: 61 ----EPD-SEEL----------------------IPKKMRQQAELAMDMAQVILFVVDGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT +D ++A L K K ++L VNK ++ + +F+ LGF P+P+S+ G
Sbjct: 94 AGLTPSDRDVALMLLKT--KKPVLLVVNKVDN-KNLPDDFYDFYELGFGEPIPVSSSIGL 150
Query: 343 GTGELLDLVCSELKK---VEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
GTG+LLD V + E ED+V+ +AIVG+PN GKSSILN L+GE+R IV
Sbjct: 151 GTGDLLDEVVKNFPQDMDTELDEDVVK-------VAIVGKPNAGKSSILNRLIGEERVIV 203
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
SPI+GTTRDAIDT + +G+K+ IDTAGIR+++ + + E SV RA+ ++ ++D
Sbjct: 204 SPIAGTTRDAIDT-YIEMDGKKYLFIDTAGIRRKSKVYEN---IEKYSVIRAYASVEKAD 259
Query: 460 VVALVIEAMACITEQ 474
VV VI+A I+EQ
Sbjct: 260 VVLTVIDATEGISEQ 274
>gi|399890216|ref|ZP_10776093.1| GTP-binding protein Der [Clostridium arbusti SL206]
Length = 438
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 183/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVEDTPGVTRDRIYAEAEWINNLFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + + VA+M RQA AIE + VI+F+VDG+
Sbjct: 62 ----EPE-------------------SNDIIVAQM----RRQAQMAIETADVIVFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A LRK+ K I+L VNK + EF++LG P+ ISA G
Sbjct: 95 QGLTDADNEVALMLRKS--RKPIVLVVNKIDKLADE-QNSFEFYNLGIGDPITISASQGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V K++ ++E + IA+VGRPNVGKSS++N L+GEDR IVS I
Sbjct: 152 GLGDMLDKVVEHFKEIHN----IDENDEYTKIAVVGRPNVGKSSLINRLLGEDRVIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDA+D+ +G KF LIDTAG+R+++ + E SV R AI RSDV
Sbjct: 208 PGTTRDAVDSYLETDKG-KFILIDTAGLRRKSKVKEE---IERYSVIRTLAAIERSDVCI 263
Query: 463 LVIEAMACITEQ 474
L+++A +++Q
Sbjct: 264 LILDATEQLSDQ 275
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 35/209 (16%)
Query: 155 IGNVPEH-LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
I N+ E+ ++A+VGRPNVGKS+L NRL+G +R IV D PG TRD + + +F
Sbjct: 167 IHNIDENDEYTKIAVVGRPNVGKSSLINRLLGEDRVIVSDIPGTTRDAVDSYLETDKGKF 226
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
+L+DT G+ SK + I E ++ T+ AAIE S
Sbjct: 227 ILIDTAGLRRKSKVKEEI-ERYSVIRTL--------------------------AAIERS 259
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WS 328
V I ++D L+ DE+I + + + K I++ VNK + K + +F +
Sbjct: 260 DVCILILDATEQLSDQDEKIIGYAHE--LSKAIMVIVNKWDLIEKDDKTMDQFKKNIQYK 317
Query: 329 LGFSPLPISAISGTGTGELLDLVCSELKK 357
L F TG+ ++ + E+KK
Sbjct: 318 LSFMAYAQYMFISAKTGQRVNKLLDEVKK 346
>gi|402831379|ref|ZP_10880064.1| ribosome-associated GTPase EngA [Capnocytophaga sp. CM59]
gi|402282153|gb|EJU30713.1| ribosome-associated GTPase EngA [Capnocytophaga sp. CM59]
Length = 434
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 134/303 (44%), Positives = 182/303 (60%), Gaps = 42/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRLV AIV GVTRDR YG++ W +F ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLVQRREAIVDSISGVTRDRHYGKTDWNGRDFSVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
G + +E I++Q AIEE+ IIFLVD ++G
Sbjct: 62 -----------------AGGDDVFQKE---------IDKQVNLAIEEADAIIFLVDVESG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+ DEEIA LR++ F LAVNK ++ ++ M +EF++LGF + PIS+++G+GT
Sbjct: 96 IMGTDEEIAQLLRRSKKPTF--LAVNKVDNTKRA-MDANEFYALGFEEIFPISSVNGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GELLD V L + E E++ +P A+VGRPN GKSS +NAL+GE+R IV+ I+G
Sbjct: 153 GELLDAVVKVLPEEEKVEEVT-----LPRFAVVGRPNAGKSSFINALIGEERYIVTDIAG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT + G +F L+DTAGIR++A + E SV R+ RAI SDV L+
Sbjct: 208 TTRDAIDTRYN-RFGFEFNLVDTAGIRRKAKVKED---LEFYSVMRSVRAIEHSDVCLLL 263
Query: 465 IEA 467
++A
Sbjct: 264 VDA 266
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 71/157 (45%), Gaps = 29/157 (18%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
V E LPR A+VGRPN GKS+ N L+G R IV D G TRD + R EF LVD
Sbjct: 169 VEEVTLPRFAVVGRPNAGKSSFINALIGEERYIVTDIAGTTRDAIDTRYNRFGFEFNLVD 228
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + + EDL + + ++ AIE S V +
Sbjct: 229 TAGI----RRKAKVKEDLEFYSVM-----------------------RSVRAIEHSDVCL 261
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
LVD G D I WL + K I++ VNK +
Sbjct: 262 LLVDATRGFEGQDANIF-WLAQR-NKKGIVILVNKWD 296
>gi|374993845|ref|YP_004969344.1| ribosome-associated GTPase EngA [Desulfosporosinus orientis DSM
765]
gi|357212211|gb|AET66829.1| ribosome-associated GTPase EngA [Desulfosporosinus orientis DSM
765]
Length = 443
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 189/312 (60%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ GG AIV + PGVTRDR+Y + W +F L+DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRITGGLVAIVENMPGVTRDRLYRDAEWLGRKFALIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
EG ++ S + RQA A+EE+ V+IF+VD Q
Sbjct: 62 ----------------EFKNEGTAIS----------SQMRRQAEIAMEEADVVIFVVDAQ 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
T D+ IA LR++ K ++L NK E ++ Q+ ++ S G P+PISA+ G
Sbjct: 96 ISPTPDDDLIARTLRRS--GKPVLLVANKVEDFKQVEGQLYDYLSFGLGEPIPISAVHGM 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
TG+LLDLV S L ++ D E + + I+++GRPNVGKSS++N L+G++R IVS +
Sbjct: 154 NTGDLLDLVISNLPEI----DEEEYDPDVIRISVIGRPNVGKSSLVNNLLGKERVIVSNV 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F EG+ + LIDTAG+R+++ I TE SV R+ RA+ RSD +
Sbjct: 210 PGTTRDAIDTPFEH-EGRHYILIDTAGMRRKSRIE---DLTEQYSVVRSLRAVDRSDAIL 265
Query: 463 LVIEAMACITEQ 474
++I+A+ +TEQ
Sbjct: 266 MLIDAVDGVTEQ 277
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
R++++GRPNVGKS+L N L+G R IV + PG TRD + F EHE ++L+DT G+
Sbjct: 180 RISVIGRPNVGKSSLVNNLLGKERVIVSNVPGTTRDAI-DTPF--EHEGRHYILIDTAGM 236
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ +EDL T + +V R + A++ S I+ L+D
Sbjct: 237 RRKSR-----IEDL--------------TEQYSVVR--------SLRAVDRSDAILMLID 269
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP 333
G+T D++IA + K I+L VNK + +K +++F L ++P
Sbjct: 270 AVDGVTEQDKKIAGYAED--AGKAIVLVVNKWDLIQKDEKTINKFEKSIREELGFLQYAP 327
Query: 334 -LPISAISGTGTGELLDLV 351
+ ISA +G ++LDLV
Sbjct: 328 TMFISAKTGQRVNKILDLV 346
>gi|424780309|ref|ZP_18207189.1| GTP-binding protein EngA [Catellicoccus marimammalium M35/04/3]
gi|422843267|gb|EKU27708.1| GTP-binding protein EngA [Catellicoccus marimammalium M35/04/3]
Length = 436
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 134/311 (43%), Positives = 183/311 (58%), Gaps = 42/311 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS LFNR+ G +IV DEPGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTLFNRIAGDRISIVEDEPGVTRDRIYATGEWLGHEFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+G E P S I+ QA A++E+ VI+F+ G+
Sbjct: 62 ----------------DLGDE--PFM----------SQIKEQAQIAMDEADVILFVTSGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+T ADE +A L ++ +K +IL VNK ++P + +F++LG P P+S G
Sbjct: 94 EHVTDADEAVAHMLYRS--NKPVILVVNKVDNPEMR-NDIYDFYALGLGDPYPVSGAHGV 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD + + E E + +++GRPNVGKSS++NA++GEDR IVS I
Sbjct: 151 GMGDVLDKAIQYFPEEKEEE-----EEGVIKFSLIGRPNVGKSSLINAILGEDRVIVSNI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT F EGQKF +IDTAG+RKR + + TE SV R+ +AI RSDVV
Sbjct: 206 AGTTRDAIDTSFVDEEGQKFVMIDTAGMRKRGKVYEN---TEKYSVMRSMKAIDRSDVVL 262
Query: 463 LVIEAMACITE 473
+V+ A I E
Sbjct: 263 MVLNAEEGIRE 273
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 32/164 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R IV + G TRD + SF E +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIVSNIAGTTRDAI-DTSFVDEEGQKFVMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R + AI+ S V++ +++
Sbjct: 235 KRGKVYEN-------------------TEKYSVMR--------SMKAIDRSDVVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+ G+ D+ IA + + K +I+ VNK ++ K + EF
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGMIIVVNKWDAIEKDNHTMKEF 309
>gi|304436527|ref|ZP_07396500.1| ribosome-associated GTPase EngA [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304370470|gb|EFM24122.1| ribosome-associated GTPase EngA [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 442
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 143/312 (45%), Positives = 188/312 (60%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMPGVTRDRIYLDAEWLNHEFTIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + + M S QA A+EE+ VI+FLVDG+
Sbjct: 61 ----------------------IEFDESDHILRSMRS----QAELAMEEADVILFLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT +DEE+A LR+ K +ILAVNK +S + + + +F+SLG P+PISA +
Sbjct: 95 AGLTTSDEEVARLLRRT--KKPVILAVNKIDSFEREAL-IYDFYSLGLGDPIPISASNAM 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V + + E E +E + I AIA+VGRPNVGKSS++N L+GE+R IVS +
Sbjct: 152 NLGDLLDAVVAAFPE-EPAES--QETDEI-AIAVVGRPNVGKSSLVNRLLGEERVIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT FT +G K+ LIDTAG+R++ I E SV R+ RAI R+ VV
Sbjct: 208 PGTTRDAIDTHFT-KDGAKYLLIDTAGMRRKGKITLP---VERYSVMRSLRAIDRAGVVL 263
Query: 463 LVIEAMACITEQ 474
+VI A I EQ
Sbjct: 264 MVINAAEGILEQ 275
>gi|238926984|ref|ZP_04658744.1| GTP-binding protein EngA [Selenomonas flueggei ATCC 43531]
gi|238885218|gb|EEQ48856.1| GTP-binding protein EngA [Selenomonas flueggei ATCC 43531]
Length = 441
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 143/312 (45%), Positives = 188/312 (60%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMPGVTRDRIYLDAEWLTHEFTIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + + M S QA A+EE+ VI+FLVDG+
Sbjct: 61 ----------------------IEFDESDHILRSMRS----QAELAMEEADVILFLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+GLT +DEE+A LR+ K +ILAVNK +S + + + +F+SLG P+PISA +
Sbjct: 95 SGLTTSDEEVARLLRRT--KKPVILAVNKIDSFEREAL-IYDFYSLGLGDPIPISASNAM 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V + E E V+E + I AIA+VGRPNVGKSS++N L+GE+R IVS +
Sbjct: 152 NLGDLLDAVVAAFP-TEPAE--VQETDEI-AIAVVGRPNVGKSSLVNRLLGEERVIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT FT +G K+ LIDTAG+R++ I E SV R+ RAI R+ VV
Sbjct: 208 PGTTRDAIDTHFT-KDGAKYLLIDTAGMRRKGKITLP---VERYSVMRSLRAIDRAGVVL 263
Query: 463 LVIEAMACITEQ 474
+VI A I EQ
Sbjct: 264 MVINAAEGILEQ 275
>gi|167768008|ref|ZP_02440061.1| hypothetical protein CLOSS21_02551 [Clostridium sp. SS2/1]
gi|317498398|ref|ZP_07956693.1| ribosome-associated GTPase EngA [Lachnospiraceae bacterium
5_1_63FAA]
gi|429761254|ref|ZP_19293684.1| ribosome biogenesis GTPase Der [Anaerostipes hadrus DSM 3319]
gi|167710337|gb|EDS20916.1| ribosome biogenesis GTPase Der [Clostridium sp. SS2/1]
gi|291561010|emb|CBL39810.1| ribosome-associated GTPase EngA [butyrate-producing bacterium
SSC/2]
gi|316894292|gb|EFV16479.1| ribosome-associated GTPase EngA [Lachnospiraceae bacterium
5_1_63FAA]
gi|429184278|gb|EKY25301.1| ribosome biogenesis GTPase Der [Anaerostipes hadrus DSM 3319]
Length = 440
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 183/312 (58%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W ++F L+DTGG+
Sbjct: 4 PIIAIVGRPNVGKSTLFNALAGEKISIVKDTPGVTRDRIYADVTWLNYQFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ DL ++ G QA A+E + VIIFL D +
Sbjct: 62 ----EPD-SGDLLLSHMRG----------------------QAEIAMETADVIIFLTDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
GL AD ++AD LR++ K I+LAVNK ++ K ++ EF++LG +P P+SA S
Sbjct: 95 QGLVDADYQVADMLRRS--GKPIVLAVNKVDNYEKFVLDTYEFYNLGLGTPFPVSANSKI 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V +D E+E+ P +AI+G+PN GKSS++N L+GEDR IVS I
Sbjct: 153 GFGDLLDEVLVHC----NPQDADEKEDERPRVAIIGKPNAGKSSLINKLLGEDRLIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT G+++ IDTAG+RK+A + E SV R A+ R DV
Sbjct: 209 AGTTRDAIDTT-VKRNGKEYVFIDTAGLRKKARVKED---IERYSVIRTVAAVERCDVAI 264
Query: 463 LVIEAMACITEQ 474
LVI+A ITEQ
Sbjct: 265 LVIDAEEGITEQ 276
>gi|431295478|ref|ZP_19507366.1| GTPase Der [Enterococcus faecium E1626]
gi|430581568|gb|ELB20013.1| GTPase Der [Enterococcus faecium E1626]
Length = 436
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 186/314 (59%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYAKGEWLGREFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
+G E P M I+ QA AIEE+ VII +V
Sbjct: 62 ----------------DLGDE--------------PFMDQIKHQAEIAIEEADVIICVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L ++ +K +ILAVNK ++P + EF+SLG P P+S
Sbjct: 92 GREGVTDADEMVAKILYRS--NKPVILAVNKVDNPEMR-NDIYEFYSLGLGDPYPVSGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD E K E E+++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGIGDILD----EAVKYFSEETEEEDDDTI-KFSLIGRPNVGKSSLINAILGEERVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F GQKF +IDTAG+RKR + + TE SV RA RAI RSD+
Sbjct: 204 DIEGTTRDAIDTHFVSKSGQKFLMIDTAGMRKRGKVYEN---TEKYSVMRAMRAIDRSDI 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 41/187 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R IV D G TRD + + S G+ +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIVSDIEGTTRDAIDTHFVSKSGQ-KFLMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KRGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ +A + + + II+ VNK + +K + EF L ++P+
Sbjct: 268 EEGIREQDKRVAGYAHE--AGRGIIIVVNKWDLVKKETNTMRDFEQEIRDEFRYLDYAPI 325
Query: 335 P-ISAIS 340
+SA++
Sbjct: 326 VFVSAVT 332
>gi|312871411|ref|ZP_07731506.1| ribosome biogenesis GTPase Der [Lactobacillus iners LEAF 3008A-a]
gi|311093064|gb|EFQ51413.1| ribosome biogenesis GTPase Der [Lactobacillus iners LEAF 3008A-a]
Length = 435
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/313 (42%), Positives = 185/313 (59%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+PGVTRDR+Y + W +F+LVDTGG+
Sbjct: 3 LPVVALVGRPNVGKSTIFNRIINSRVAIVEDQPGVTRDRIYANAQWMGKQFVLVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ N++E+ I+ QA AI E+ VI+ L D
Sbjct: 62 ---TFEDNVIEE--------------------------QIKTQAEIAINEADVIVMLSDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L K K IILA+NK ++P + + +F+SLG P+P+S G
Sbjct: 93 TGHVTNLDETIAKILYK--AKKPIILAINKADNPEQR-NDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + S+ T+D +N I +I+GRPNVGKSSI+N+++GE+R IV+
Sbjct: 150 TGLGDLLDAIVSKFNGNNTTDD----DNNI-RFSIIGRPNVGKSSIVNSILGENRVIVAE 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
+ GTTRDAIDT F +GQK+ ++DTAGIR++ + E SV R+ AI +SDV
Sbjct: 205 MEGTTRDAIDTIFE-KDGQKYTIVDTAGIRRKGKVYEK---VEKYSVMRSISAIEQSDVA 260
Query: 462 ALVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 261 IIVIDASVGIIEQ 273
>gi|332879048|ref|ZP_08446757.1| ribosome biogenesis GTPase Der [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|357047629|ref|ZP_09109227.1| ribosome biogenesis GTPase Der [Paraprevotella clara YIT 11840]
gi|332682997|gb|EGJ55885.1| ribosome biogenesis GTPase Der [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|355529317|gb|EHG98751.1| ribosome biogenesis GTPase Der [Paraprevotella clara YIT 11840]
Length = 437
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/311 (45%), Positives = 183/311 (58%), Gaps = 43/311 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL AIV DE G TRDR YG+S W EF ++DTGG V+N
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRHAIVSDEAGTTRDRQYGKSEWTGREFSVIDTGGWVVN- 63
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+I E+ I +Q T A EE+ VI+FLVD +
Sbjct: 64 ---SDDIFEE--------------------------EIRKQVTLATEEADVILFLVDVRN 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
GLT DE +A+ LR+ K +IL NK ++ + I +EF++LG P ISA +G+G
Sbjct: 95 GLTDLDEAVANILRRT--KKPVILVANKADT-NEWIYSAAEFYALGLGDPYCISAATGSG 151
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
TGELLDL+ S+ K T+D E + IP A+VGRPN GKSS++NA +GE+R IV+ I+
Sbjct: 152 TGELLDLIVSKFPKT--TDD--ETDENIPRFAVVGRPNAGKSSLINAFIGEERNIVTDIA 207
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRD+I T +T G F L+DTAGIR++ + E SV R+ RAI SDV L
Sbjct: 208 GTTRDSIYTRYT-KFGFDFYLVDTAGIRRKNKVTED---LEYYSVMRSIRAIENSDVCIL 263
Query: 464 VIEAMACITEQ 474
+++A I Q
Sbjct: 264 MLDAERGIEAQ 274
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 29/152 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+PR A+VGRPN GKS+L N +G R IV D G TRD +Y R +F LVDT G+
Sbjct: 175 IPRFAVVGRPNAGKSSLINAFIGEERNIVTDIAGTTRDSIYTRYTKFGFDFYLVDTAGI- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ AIE S V I ++D
Sbjct: 234 ---RRKNKVTEDLEYYSVM-----------------------RSIRAIENSDVCILMLDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+ G+ A D I +++N +K +++ VNK +
Sbjct: 268 ERGIEAQDLNIFQLIQRN--NKSLVVVVNKWD 297
>gi|302191345|ref|ZP_07267599.1| GTP-binding protein EngA [Lactobacillus iners AB-1]
gi|309804160|ref|ZP_07698238.1| ribosome biogenesis GTPase Der [Lactobacillus iners LactinV 11V1-d]
gi|312872309|ref|ZP_07732379.1| ribosome biogenesis GTPase Der [Lactobacillus iners LEAF 2062A-h1]
gi|312873983|ref|ZP_07734019.1| ribosome biogenesis GTPase Der [Lactobacillus iners LEAF 2052A-d]
gi|325912827|ref|ZP_08175205.1| ribosome biogenesis GTPase Der [Lactobacillus iners UPII 60-B]
gi|329921288|ref|ZP_08277726.1| ribosome biogenesis GTPase Der [Lactobacillus iners SPIN 1401G]
gi|349611403|ref|ZP_08890639.1| GTP-binding protein engA [Lactobacillus sp. 7_1_47FAA]
gi|308163743|gb|EFO66012.1| ribosome biogenesis GTPase Der [Lactobacillus iners LactinV 11V1-d]
gi|311090532|gb|EFQ48940.1| ribosome biogenesis GTPase Der [Lactobacillus iners LEAF 2052A-d]
gi|311092132|gb|EFQ50506.1| ribosome biogenesis GTPase Der [Lactobacillus iners LEAF 2062A-h1]
gi|325477820|gb|EGC80954.1| ribosome biogenesis GTPase Der [Lactobacillus iners UPII 60-B]
gi|328934580|gb|EGG31084.1| ribosome biogenesis GTPase Der [Lactobacillus iners SPIN 1401G]
gi|348608725|gb|EGY58695.1| GTP-binding protein engA [Lactobacillus sp. 7_1_47FAA]
Length = 435
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/313 (42%), Positives = 185/313 (59%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+PGVTRDR+Y + W +F+LVDTGG+
Sbjct: 3 LPVVALVGRPNVGKSTIFNRIINSRVAIVEDQPGVTRDRIYANAQWMGKQFVLVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ N++E+ I+ QA AI E+ VI+ L D
Sbjct: 62 ---TFEDNVIEE--------------------------QIKTQAEIAINEADVIVMLSDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L K K IILA+NK ++P + + +F+SLG P+P+S G
Sbjct: 93 TGHVTNLDETIAKILYK--AKKPIILAINKADNPEQR-NDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + S+ T+D +N I +I+GRPNVGKSSI+N+++GE+R IV+
Sbjct: 150 TGLGDLLDAIVSKFNGNNTTDD----DNNI-RFSIIGRPNVGKSSIVNSILGENRVIVAD 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
+ GTTRDAIDT F +GQK+ ++DTAGIR++ + E SV R+ AI +SDV
Sbjct: 205 MEGTTRDAIDTIFE-KDGQKYTIVDTAGIRRKGKVYEK---VEKYSVMRSISAIEQSDVA 260
Query: 462 ALVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 261 IIVIDASVGIIEQ 273
>gi|294791776|ref|ZP_06756924.1| ribosome-associated GTPase EngA [Veillonella sp. 6_1_27]
gi|294793637|ref|ZP_06758774.1| ribosome-associated GTPase EngA [Veillonella sp. 3_1_44]
gi|294455207|gb|EFG23579.1| ribosome-associated GTPase EngA [Veillonella sp. 3_1_44]
gi|294457006|gb|EFG25368.1| ribosome-associated GTPase EngA [Veillonella sp. 6_1_27]
Length = 444
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 191/312 (61%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W EF ++DTG
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTG---- 59
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
GI T + V +P M+ QA AIEE+ VI+F+VDG+
Sbjct: 60 ---------------------GIEFITDNSHV--IPKMMRLQAELAIEEADVILFVVDGK 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ ADEE+A+ LR + K ++L VNK +S + + EF++LG P+ ISA +
Sbjct: 97 QGIVPADEEVANILRAS--GKPVVLVVNKIDSVNQE-PNIYEFYNLGLGDPIGISAKNLM 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V GT V++E+ I +AI+GRPNVGKSS+ NAL+G+DR IVS +
Sbjct: 154 NLGDLLDDTVKHFPPV-GTN--VDDEDTI-HVAIIGRPNVGKSSLTNALLGQDRVIVSDV 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+IDT +T E QKF LIDTAG+R+++ I + E S+ R+ R++ R+D+V
Sbjct: 210 AGTTRDSIDTYWTH-ENQKFVLIDTAGMRRKSKIEEA---VERYSIVRSLRSVDRADIVV 265
Query: 463 LVIEAMACITEQ 474
LV++A +TEQ
Sbjct: 266 LVLDAQDGVTEQ 277
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 38/182 (20%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFM 214
NV + VAI+GRPNVGKS+L N L+G +R IV D G TRD + ++W +F+
Sbjct: 172 NVDDEDTIHVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSI--DTYWTHENQKFV 229
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ SK E AV R + ++ +++ +
Sbjct: 230 LIDTAGMRRKSKI------------------------EEAVERYSIV---RSLRSVDRAD 262
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE--FWSL 329
+++ ++D Q G+T D++IA + + K +++ VNK E K ++ +E + L
Sbjct: 263 IVVLVLDAQDGVTEQDKKIAGYAYE--AGKGVVIVVNKWDLVEKDDKTTLRFTEDIYDEL 320
Query: 330 GF 331
GF
Sbjct: 321 GF 322
>gi|257898848|ref|ZP_05678501.1| GTP-binding protein engA [Enterococcus faecium Com15]
gi|257836760|gb|EEV61834.1| GTP-binding protein engA [Enterococcus faecium Com15]
Length = 436
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 186/314 (59%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYAKGEWLGREFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
+G E P M I+ QA AIEE+ VII +V
Sbjct: 62 ----------------DLGDE--------------PFMDQIKHQAEIAIEEADVIICVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L ++ +K +ILAVNK ++P + EF+SLG P P+S
Sbjct: 92 GREGVTDADEMVAKILYRS--NKPVILAVNKVDNPEMR-NDIYEFYSLGLGDPYPVSGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD E K E E+++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGIGDILD----EAVKYFSEETEEEDDDTI-KFSLIGRPNVGKSSLINAILGEERVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F GQKF +IDTAG+RKR + + TE SV RA RAI RSD+
Sbjct: 204 DIEGTTRDAIDTHFVSENGQKFLMIDTAGMRKRGKVYEN---TEKYSVMRAMRAIDRSDI 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 41/187 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH--EFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R IV D G TRD + F E+ +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIVSDIEGTTRDAI-DTHFVSENGQKFLMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KRGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ +A + + + II+ VNK + +K + EF L ++P+
Sbjct: 268 EEGIREQDKRVAGYAHE--AGRGIIIVVNKWDLVKKETNTMRDFEQEIRDEFRYLDYAPI 325
Query: 335 P-ISAIS 340
+SA++
Sbjct: 326 VFVSAVT 332
>gi|306820449|ref|ZP_07454085.1| ribosome-associated GTPase EngA [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|402309399|ref|ZP_10828392.1| ribosome-associated GTPase EngA [Eubacterium sp. AS15]
gi|304551524|gb|EFM39479.1| ribosome-associated GTPase EngA [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|400372366|gb|EJP25310.1| ribosome-associated GTPase EngA [Eubacterium sp. AS15]
Length = 439
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/310 (45%), Positives = 182/310 (58%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRLVG +IV D PGVTRDR++ W + F L+DTG
Sbjct: 5 VAIVGRPNVGKSTLFNRLVGEKISIVEDTPGVTRDRIFADVNWLTYTFTLIDTG------ 58
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
GI T E +P+M+ +QA AI+ S VI+F++DG+ G
Sbjct: 59 -------------------GIETDTEEM----IPAMMRKQAQVAIDMSDVIMFVLDGKNG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
L D E+ LRK+ K +IL VNK + K +F+ LGF + +SA G G
Sbjct: 96 LHPQDFEVGTMLRKS--KKPVILVVNKVDGS-KLPDDYYDFYQLGFDDMYAVSASQGLGI 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V K ++L EE+ +AIVGRPN GKSSILNA++GE+RTIVSPI+G
Sbjct: 153 GDLLDEVVGLFPK----DELEIEEDDSIKVAIVGRPNAGKSSILNAIIGEERTIVSPIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAID E +G+ + IDTAGIRK+ I + E SV R++ AI R DVV +V
Sbjct: 209 TTRDAID-EKCEIDGKSYTFIDTAGIRKKNKIFDN---IEKYSVLRSYTAIERCDVVLMV 264
Query: 465 IEAMACITEQ 474
I+A ++EQ
Sbjct: 265 IDATEMVSEQ 274
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAIVGRPN GKS++ N ++G R IV G TRD + + + +DT G+
Sbjct: 177 KVAIVGRPNAGKSSILNAIIGEERTIVSPIAGTTRDAIDEKCEIDGKSYTFIDTAGIRKK 236
Query: 225 SKSQPNI 231
+K NI
Sbjct: 237 NKIFDNI 243
>gi|259500656|ref|ZP_05743558.1| ribosome-associated GTPase EngA [Lactobacillus iners DSM 13335]
gi|259168040|gb|EEW52535.1| ribosome-associated GTPase EngA [Lactobacillus iners DSM 13335]
Length = 442
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/313 (42%), Positives = 185/313 (59%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+PGVTRDR+Y + W +F+LVDTGG+
Sbjct: 10 LPVVALVGRPNVGKSTIFNRIINSRVAIVEDQPGVTRDRIYANAQWMGKQFVLVDTGGI- 68
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ N++E+ I+ QA AI E+ VI+ L D
Sbjct: 69 ---TFEDNVIEE--------------------------QIKTQAEIAINEADVIVMLSDV 99
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L K K IILA+NK ++P + + +F+SLG P+P+S G
Sbjct: 100 TGHVTNLDETIAKILYK--AKKPIILAINKADNPEQR-NDIYDFYSLGLGDPIPVSGSHG 156
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + S+ T+D +N I +I+GRPNVGKSSI+N+++GE+R IV+
Sbjct: 157 TGLGDLLDAIVSKFNGNNTTDD----DNNI-RFSIIGRPNVGKSSIVNSILGENRVIVAD 211
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
+ GTTRDAIDT F +GQK+ ++DTAGIR++ + E SV R+ AI +SDV
Sbjct: 212 MEGTTRDAIDTIFE-KDGQKYTIVDTAGIRRKGKVYEK---VEKYSVMRSISAIEQSDVA 267
Query: 462 ALVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 268 IIVIDASVGIIEQ 280
>gi|430852810|ref|ZP_19470541.1| GTPase Der [Enterococcus faecium E1258]
gi|430541644|gb|ELA81789.1| GTPase Der [Enterococcus faecium E1258]
Length = 436
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 186/314 (59%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYAKGEWLGREFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
+G E P M I+ QA AIEE+ VII +V
Sbjct: 62 ----------------DLGDE--------------PFMDQIKHQAEIAIEEADVIICVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L ++ +K +ILAVNK ++P + EF+SLG P P+S
Sbjct: 92 GREGVTDADEMVAKILYRS--NKPVILAVNKVDNPEMR-NDIYEFYSLGLGDPYPVSGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD E K E E+++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGIGDILD----EAVKYFSEETEEEDDDTI-KFSLIGRPNVGKSSLINAILGEERVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F GQKF +IDTAG+RKR + + TE SV RA RAI RSD+
Sbjct: 204 DIEGTTRDAIDTHFVSESGQKFLMIDTAGMRKRGKVYEN---TEKYSVMRAMRAIDRSDI 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 41/187 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R IV D G TRD + F E +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIVSDIEGTTRDAI-DTHFVSESGQKFLMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KRGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ +A + + + II+ VNK + +K + EF L ++P+
Sbjct: 268 EEGIREQDKRVAGYAHE--AGRGIIMVVNKWDLVKKETNTMRDFEQEIRDEFRYLDYAPI 325
Query: 335 P-ISAIS 340
+SA++
Sbjct: 326 VFVSAVT 332
>gi|227551166|ref|ZP_03981215.1| GTP-binding protein EngA [Enterococcus faecium TX1330]
gi|257896210|ref|ZP_05675863.1| GTP-binding protein engA [Enterococcus faecium Com12]
gi|293379548|ref|ZP_06625690.1| ribosome-associated GTPase EngA [Enterococcus faecium PC4.1]
gi|293570249|ref|ZP_06681318.1| GTP-binding protein EngA [Enterococcus faecium E980]
gi|425053987|ref|ZP_18457502.1| ribosome biogenesis GTPase Der [Enterococcus faecium 505]
gi|430840957|ref|ZP_19458878.1| GTPase Der [Enterococcus faecium E1007]
gi|431068951|ref|ZP_19494144.1| GTPase Der [Enterococcus faecium E1604]
gi|431102178|ref|ZP_19496789.1| GTPase Der [Enterococcus faecium E1613]
gi|431580924|ref|ZP_19520016.1| GTPase Der [Enterococcus faecium E1861]
gi|431738036|ref|ZP_19526986.1| GTPase Der [Enterococcus faecium E1972]
gi|431740464|ref|ZP_19529379.1| GTPase Der [Enterococcus faecium E2039]
gi|431751503|ref|ZP_19540191.1| GTPase Der [Enterococcus faecium E2620]
gi|431761601|ref|ZP_19550163.1| GTPase Der [Enterococcus faecium E3548]
gi|227179728|gb|EEI60700.1| GTP-binding protein EngA [Enterococcus faecium TX1330]
gi|257832775|gb|EEV59196.1| GTP-binding protein engA [Enterococcus faecium Com12]
gi|291609656|gb|EFF38917.1| GTP-binding protein EngA [Enterococcus faecium E980]
gi|292641857|gb|EFF60025.1| ribosome-associated GTPase EngA [Enterococcus faecium PC4.1]
gi|403036911|gb|EJY48244.1| ribosome biogenesis GTPase Der [Enterococcus faecium 505]
gi|430494688|gb|ELA70923.1| GTPase Der [Enterococcus faecium E1007]
gi|430567890|gb|ELB06957.1| GTPase Der [Enterococcus faecium E1604]
gi|430570406|gb|ELB09367.1| GTPase Der [Enterococcus faecium E1613]
gi|430594691|gb|ELB32655.1| GTPase Der [Enterococcus faecium E1861]
gi|430598072|gb|ELB35832.1| GTPase Der [Enterococcus faecium E1972]
gi|430603328|gb|ELB40858.1| GTPase Der [Enterococcus faecium E2039]
gi|430615284|gb|ELB52242.1| GTPase Der [Enterococcus faecium E2620]
gi|430624293|gb|ELB60943.1| GTPase Der [Enterococcus faecium E3548]
Length = 436
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 186/314 (59%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYAKGEWLGREFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
+G E P M I+ QA AIEE+ VII +V
Sbjct: 62 ----------------DLGDE--------------PFMDQIKHQAEIAIEEADVIICVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L ++ +K +ILAVNK ++P + EF+SLG P P+S
Sbjct: 92 GREGVTDADEMVAKILYRS--NKPVILAVNKVDNPEMR-NDIYEFYSLGLGDPYPVSGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD E K E E+++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGIGDILD----EAVKYFSEETEEEDDDTI-KFSLIGRPNVGKSSLINAILGEERVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F GQKF +IDTAG+RKR + + TE SV RA RAI RSD+
Sbjct: 204 DIEGTTRDAIDTHFVSESGQKFLMIDTAGMRKRGKVYEN---TEKYSVMRAMRAIDRSDI 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 41/187 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R IV D G TRD + F E +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIVSDIEGTTRDAI-DTHFVSESGQKFLMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KRGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ +A + + + +I+ VNK + +K + EF L ++P+
Sbjct: 268 EEGIREQDKRVAGYAHE--AGRGVIIVVNKWDLVKKETNTMRDFEQEIRDEFRYLDYAPI 325
Query: 335 P-ISAIS 340
+SA++
Sbjct: 326 VFVSAVT 332
>gi|430836239|ref|ZP_19454222.1| GTPase Der [Enterococcus faecium E0680]
gi|430488596|gb|ELA65258.1| GTPase Der [Enterococcus faecium E0680]
Length = 436
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 186/314 (59%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYAKGEWLGREFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
+G E P M I+ QA AIEE+ VII +V
Sbjct: 62 ----------------DLGDE--------------PFMDQIKHQAEIAIEEADVIICVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L ++ +K +ILAVNK ++P + EF+SLG P P+S
Sbjct: 92 GREGVTDADEMVAKILYRS--NKPVILAVNKVDNPEMR-NDIYEFYSLGLGDPYPVSGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD E K E E+++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGIGDILD----EAVKYFSEETEEEDDDTI-KFSLIGRPNVGKSSLINAILGEERVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F GQKF +IDTAG+RKR + + TE SV RA RAI RSD+
Sbjct: 204 DIEGTTRDAIDTHFVSESGQKFLMIDTAGMRKRGKVYEN---TEKYSVMRAMRAIDRSDI 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 41/187 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R IV D G TRD + F E +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIVSDIEGTTRDAI-DTHFVSESGQKFLMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KRGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ +A + + + II+ VNK + +K + EF L ++P+
Sbjct: 268 EEGIREQDKRVAGYAHE--AGRGIIIVVNKWDLVKKETNTMRDFEQEIRDEFRYLDYAPI 325
Query: 335 P-ISAIS 340
+SA++
Sbjct: 326 VFVSAVT 332
>gi|257877995|ref|ZP_05657648.1| GTP-binding protein engA [Enterococcus faecium 1,230,933]
gi|257881218|ref|ZP_05660871.1| GTP-binding protein engA [Enterococcus faecium 1,231,502]
gi|257884882|ref|ZP_05664535.1| GTP-binding protein engA [Enterococcus faecium 1,231,501]
gi|257889806|ref|ZP_05669459.1| GTP-binding protein engA [Enterococcus faecium 1,231,410]
gi|257892257|ref|ZP_05671910.1| GTP-binding protein engA [Enterococcus faecium 1,231,408]
gi|260559046|ref|ZP_05831232.1| GTP-binding protein engA [Enterococcus faecium C68]
gi|261207580|ref|ZP_05922265.1| GTP-binding protein engA [Enterococcus faecium TC 6]
gi|289565092|ref|ZP_06445545.1| ribosome-associated GTPase EngA [Enterococcus faecium D344SRF]
gi|293556739|ref|ZP_06675302.1| ribosome-associated GTPase EngA [Enterococcus faecium E1039]
gi|293563397|ref|ZP_06677846.1| GTP-binding protein EngA [Enterococcus faecium E1162]
gi|294614846|ref|ZP_06694741.1| GTP-binding protein EngA [Enterococcus faecium E1636]
gi|294618677|ref|ZP_06698211.1| GTP-binding protein EngA [Enterococcus faecium E1679]
gi|294621937|ref|ZP_06701085.1| GTP-binding protein EngA [Enterococcus faecium U0317]
gi|314938008|ref|ZP_07845318.1| ribosome-associated GTPase EngA [Enterococcus faecium TX0133a04]
gi|314942006|ref|ZP_07848867.1| ribosome-associated GTPase EngA [Enterococcus faecium TX0133C]
gi|314948741|ref|ZP_07852113.1| ribosome-associated GTPase EngA [Enterococcus faecium TX0082]
gi|314951759|ref|ZP_07854798.1| ribosome-associated GTPase EngA [Enterococcus faecium TX0133A]
gi|314991834|ref|ZP_07857292.1| ribosome-associated GTPase EngA [Enterococcus faecium TX0133B]
gi|314995875|ref|ZP_07860962.1| ribosome-associated GTPase EngA [Enterococcus faecium TX0133a01]
gi|383328525|ref|YP_005354409.1| ribosome-associated GTPase EngA [Enterococcus faecium Aus0004]
gi|389868292|ref|YP_006375715.1| GTP-binding protein EngA [Enterococcus faecium DO]
gi|415894978|ref|ZP_11550474.1| GTP-binding protein EngA [Enterococcus faecium E4453]
gi|416134938|ref|ZP_11598399.1| GTP-binding protein EngA [Enterococcus faecium E4452]
gi|424786293|ref|ZP_18213083.1| ribosome biogenesis GTPase Der [Enterococcus faecium V689]
gi|424796677|ref|ZP_18222375.1| ribosome biogenesis GTPase Der [Enterococcus faecium S447]
gi|424825699|ref|ZP_18250662.1| ribosome biogenesis GTPase Der [Enterococcus faecium R501]
gi|424857066|ref|ZP_18281258.1| ribosome biogenesis GTPase Der [Enterococcus faecium R499]
gi|424868169|ref|ZP_18291930.1| ribosome biogenesis GTPase Der [Enterococcus faecium R497]
gi|424938689|ref|ZP_18354461.1| ribosome biogenesis GTPase Der [Enterococcus faecium R496]
gi|424954677|ref|ZP_18369565.1| ribosome biogenesis GTPase Der [Enterococcus faecium R494]
gi|424956863|ref|ZP_18371620.1| ribosome biogenesis GTPase Der [Enterococcus faecium R446]
gi|424960234|ref|ZP_18374772.1| ribosome biogenesis GTPase Der [Enterococcus faecium P1986]
gi|424963102|ref|ZP_18377367.1| ribosome biogenesis GTPase Der [Enterococcus faecium P1190]
gi|424967147|ref|ZP_18380879.1| ribosome biogenesis GTPase Der [Enterococcus faecium P1140]
gi|424969834|ref|ZP_18383382.1| ribosome biogenesis GTPase Der [Enterococcus faecium P1139]
gi|424973499|ref|ZP_18386776.1| ribosome biogenesis GTPase Der [Enterococcus faecium P1137]
gi|424976262|ref|ZP_18389365.1| ribosome biogenesis GTPase Der [Enterococcus faecium P1123]
gi|424980622|ref|ZP_18393404.1| ribosome biogenesis GTPase Der [Enterococcus faecium ERV99]
gi|424983212|ref|ZP_18395812.1| ribosome biogenesis GTPase Der [Enterococcus faecium ERV69]
gi|424986624|ref|ZP_18399033.1| ribosome biogenesis GTPase Der [Enterococcus faecium ERV38]
gi|424989622|ref|ZP_18401882.1| ribosome biogenesis GTPase Der [Enterococcus faecium ERV26]
gi|424994816|ref|ZP_18406738.1| ribosome biogenesis GTPase Der [Enterococcus faecium ERV168]
gi|424998473|ref|ZP_18410157.1| ribosome biogenesis GTPase Der [Enterococcus faecium ERV165]
gi|425001444|ref|ZP_18412959.1| ribosome biogenesis GTPase Der [Enterococcus faecium ERV161]
gi|425003665|ref|ZP_18415018.1| ribosome biogenesis GTPase Der [Enterococcus faecium ERV102]
gi|425009174|ref|ZP_18420206.1| ribosome biogenesis GTPase Der [Enterococcus faecium ERV1]
gi|425011584|ref|ZP_18422475.1| ribosome biogenesis GTPase Der [Enterococcus faecium E422]
gi|425013336|ref|ZP_18424072.1| ribosome biogenesis GTPase Der [Enterococcus faecium E417]
gi|425017170|ref|ZP_18427693.1| ribosome biogenesis GTPase Der [Enterococcus faecium C621]
gi|425020475|ref|ZP_18430779.1| ribosome biogenesis GTPase Der [Enterococcus faecium C497]
gi|425022906|ref|ZP_18433059.1| ribosome biogenesis GTPase Der [Enterococcus faecium C1904]
gi|425031840|ref|ZP_18436941.1| ribosome biogenesis GTPase Der [Enterococcus faecium 515]
gi|425036862|ref|ZP_18441577.1| ribosome biogenesis GTPase Der [Enterococcus faecium 514]
gi|425038781|ref|ZP_18443371.1| ribosome biogenesis GTPase Der [Enterococcus faecium 513]
gi|425043828|ref|ZP_18448030.1| ribosome biogenesis GTPase Der [Enterococcus faecium 511]
gi|425045674|ref|ZP_18449761.1| ribosome biogenesis GTPase Der [Enterococcus faecium 510]
gi|425049503|ref|ZP_18453350.1| ribosome biogenesis GTPase Der [Enterococcus faecium 509]
gi|425051419|ref|ZP_18455085.1| ribosome biogenesis GTPase Der [Enterococcus faecium 506]
gi|425059360|ref|ZP_18462706.1| ribosome biogenesis GTPase Der [Enterococcus faecium 504]
gi|425060005|ref|ZP_18463315.1| ribosome biogenesis GTPase Der [Enterococcus faecium 503]
gi|430820409|ref|ZP_19439041.1| GTPase Der [Enterococcus faecium E0045]
gi|430821944|ref|ZP_19440525.1| GTPase Der [Enterococcus faecium E0120]
gi|430828331|ref|ZP_19446453.1| GTPase Der [Enterococcus faecium E0269]
gi|430830281|ref|ZP_19448339.1| GTPase Der [Enterococcus faecium E0333]
gi|430833534|ref|ZP_19451546.1| GTPase Der [Enterococcus faecium E0679]
gi|430838907|ref|ZP_19456850.1| GTPase Der [Enterococcus faecium E0688]
gi|430846511|ref|ZP_19464370.1| GTPase Der [Enterococcus faecium E1133]
gi|430850111|ref|ZP_19467877.1| GTPase Der [Enterococcus faecium E1185]
gi|430854382|ref|ZP_19472095.1| GTPase Der [Enterococcus faecium E1392]
gi|430858582|ref|ZP_19476209.1| GTPase Der [Enterococcus faecium E1552]
gi|430864428|ref|ZP_19480350.1| GTPase Der [Enterococcus faecium E1574]
gi|430870378|ref|ZP_19483233.1| GTPase Der [Enterococcus faecium E1575]
gi|431193737|ref|ZP_19500244.1| GTPase Der [Enterococcus faecium E1620]
gi|431368571|ref|ZP_19509385.1| GTPase Der [Enterococcus faecium E1627]
gi|431436376|ref|ZP_19513075.1| GTPase Der [Enterococcus faecium E1630]
gi|431503058|ref|ZP_19515294.1| GTPase Der [Enterococcus faecium E1634]
gi|431539189|ref|ZP_19517693.1| GTPase Der [Enterococcus faecium E1731]
gi|431626808|ref|ZP_19523047.1| GTPase Der [Enterococcus faecium E1904]
gi|431743457|ref|ZP_19532336.1| GTPase Der [Enterococcus faecium E2071]
gi|431745739|ref|ZP_19534578.1| GTPase Der [Enterococcus faecium E2134]
gi|431748752|ref|ZP_19537507.1| GTPase Der [Enterococcus faecium E2297]
gi|431754385|ref|ZP_19543046.1| GTPase Der [Enterococcus faecium E2883]
gi|431758863|ref|ZP_19547484.1| GTPase Der [Enterococcus faecium E3346]
gi|431766289|ref|ZP_19554782.1| GTPase Der [Enterococcus faecium E4215]
gi|431766753|ref|ZP_19555214.1| GTPase Der [Enterococcus faecium E1321]
gi|431770372|ref|ZP_19558772.1| GTPase Der [Enterococcus faecium E1644]
gi|431772893|ref|ZP_19561229.1| GTPase Der [Enterococcus faecium E2369]
gi|431776241|ref|ZP_19564508.1| GTPase Der [Enterococcus faecium E2560]
gi|431778302|ref|ZP_19566513.1| GTPase Der [Enterococcus faecium E4389]
gi|431782342|ref|ZP_19570477.1| GTPase Der [Enterococcus faecium E6012]
gi|431785273|ref|ZP_19573299.1| GTPase Der [Enterococcus faecium E6045]
gi|257812223|gb|EEV40981.1| GTP-binding protein engA [Enterococcus faecium 1,230,933]
gi|257816876|gb|EEV44204.1| GTP-binding protein engA [Enterococcus faecium 1,231,502]
gi|257820720|gb|EEV47868.1| GTP-binding protein engA [Enterococcus faecium 1,231,501]
gi|257826166|gb|EEV52792.1| GTP-binding protein engA [Enterococcus faecium 1,231,410]
gi|257828636|gb|EEV55243.1| GTP-binding protein engA [Enterococcus faecium 1,231,408]
gi|260074803|gb|EEW63119.1| GTP-binding protein engA [Enterococcus faecium C68]
gi|260077963|gb|EEW65669.1| GTP-binding protein engA [Enterococcus faecium TC 6]
gi|289163099|gb|EFD10946.1| ribosome-associated GTPase EngA [Enterococcus faecium D344SRF]
gi|291592308|gb|EFF23922.1| GTP-binding protein EngA [Enterococcus faecium E1636]
gi|291595060|gb|EFF26403.1| GTP-binding protein EngA [Enterococcus faecium E1679]
gi|291598486|gb|EFF29555.1| GTP-binding protein EngA [Enterococcus faecium U0317]
gi|291601071|gb|EFF31360.1| ribosome-associated GTPase EngA [Enterococcus faecium E1039]
gi|291604658|gb|EFF34143.1| GTP-binding protein EngA [Enterococcus faecium E1162]
gi|313589979|gb|EFR68824.1| ribosome-associated GTPase EngA [Enterococcus faecium TX0133a01]
gi|313593645|gb|EFR72490.1| ribosome-associated GTPase EngA [Enterococcus faecium TX0133B]
gi|313596038|gb|EFR74883.1| ribosome-associated GTPase EngA [Enterococcus faecium TX0133A]
gi|313599258|gb|EFR78103.1| ribosome-associated GTPase EngA [Enterococcus faecium TX0133C]
gi|313642583|gb|EFS07163.1| ribosome-associated GTPase EngA [Enterococcus faecium TX0133a04]
gi|313644807|gb|EFS09387.1| ribosome-associated GTPase EngA [Enterococcus faecium TX0082]
gi|364091872|gb|EHM34295.1| GTP-binding protein EngA [Enterococcus faecium E4453]
gi|364092368|gb|EHM34749.1| GTP-binding protein EngA [Enterococcus faecium E4452]
gi|378938219|gb|AFC63291.1| ribosome-associated GTPase EngA [Enterococcus faecium Aus0004]
gi|388533541|gb|AFK58733.1| GTP-binding protein EngA [Enterococcus faecium DO]
gi|402922683|gb|EJX43038.1| ribosome biogenesis GTPase Der [Enterococcus faecium S447]
gi|402923339|gb|EJX43636.1| ribosome biogenesis GTPase Der [Enterococcus faecium V689]
gi|402925215|gb|EJX45376.1| ribosome biogenesis GTPase Der [Enterococcus faecium R501]
gi|402929491|gb|EJX49245.1| ribosome biogenesis GTPase Der [Enterococcus faecium R499]
gi|402936173|gb|EJX55370.1| ribosome biogenesis GTPase Der [Enterococcus faecium R494]
gi|402936418|gb|EJX55599.1| ribosome biogenesis GTPase Der [Enterococcus faecium R496]
gi|402937339|gb|EJX56457.1| ribosome biogenesis GTPase Der [Enterococcus faecium R497]
gi|402944867|gb|EJX63256.1| ribosome biogenesis GTPase Der [Enterococcus faecium R446]
gi|402948596|gb|EJX66720.1| ribosome biogenesis GTPase Der [Enterococcus faecium P1986]
gi|402950216|gb|EJX68225.1| ribosome biogenesis GTPase Der [Enterococcus faecium P1190]
gi|402954988|gb|EJX72562.1| ribosome biogenesis GTPase Der [Enterococcus faecium P1140]
gi|402958457|gb|EJX75770.1| ribosome biogenesis GTPase Der [Enterococcus faecium P1137]
gi|402963167|gb|EJX80053.1| ribosome biogenesis GTPase Der [Enterococcus faecium P1139]
gi|402966068|gb|EJX82739.1| ribosome biogenesis GTPase Der [Enterococcus faecium ERV99]
gi|402970065|gb|EJX86431.1| ribosome biogenesis GTPase Der [Enterococcus faecium P1123]
gi|402972210|gb|EJX88428.1| ribosome biogenesis GTPase Der [Enterococcus faecium ERV69]
gi|402976086|gb|EJX92007.1| ribosome biogenesis GTPase Der [Enterococcus faecium ERV38]
gi|402979028|gb|EJX94722.1| ribosome biogenesis GTPase Der [Enterococcus faecium ERV168]
gi|402981504|gb|EJX97030.1| ribosome biogenesis GTPase Der [Enterococcus faecium ERV26]
gi|402982908|gb|EJX98341.1| ribosome biogenesis GTPase Der [Enterococcus faecium ERV165]
gi|402986635|gb|EJY01749.1| ribosome biogenesis GTPase Der [Enterococcus faecium ERV161]
gi|402990399|gb|EJY05272.1| ribosome biogenesis GTPase Der [Enterococcus faecium ERV1]
gi|402991451|gb|EJY06238.1| ribosome biogenesis GTPase Der [Enterococcus faecium ERV102]
gi|402996322|gb|EJY10714.1| ribosome biogenesis GTPase Der [Enterococcus faecium E422]
gi|403001338|gb|EJY15399.1| ribosome biogenesis GTPase Der [Enterococcus faecium E417]
gi|403004934|gb|EJY18690.1| ribosome biogenesis GTPase Der [Enterococcus faecium C621]
gi|403009170|gb|EJY22634.1| ribosome biogenesis GTPase Der [Enterococcus faecium C497]
gi|403011656|gb|EJY24950.1| ribosome biogenesis GTPase Der [Enterococcus faecium C1904]
gi|403013162|gb|EJY26289.1| ribosome biogenesis GTPase Der [Enterococcus faecium 514]
gi|403014601|gb|EJY27589.1| ribosome biogenesis GTPase Der [Enterococcus faecium 515]
gi|403017871|gb|EJY30594.1| ribosome biogenesis GTPase Der [Enterococcus faecium 511]
gi|403018642|gb|EJY31310.1| ribosome biogenesis GTPase Der [Enterococcus faecium 513]
gi|403026597|gb|EJY38560.1| ribosome biogenesis GTPase Der [Enterococcus faecium 510]
gi|403027363|gb|EJY39256.1| ribosome biogenesis GTPase Der [Enterococcus faecium 509]
gi|403035465|gb|EJY46853.1| ribosome biogenesis GTPase Der [Enterococcus faecium 504]
gi|403037687|gb|EJY48951.1| ribosome biogenesis GTPase Der [Enterococcus faecium 506]
gi|403042997|gb|EJY53926.1| ribosome biogenesis GTPase Der [Enterococcus faecium 503]
gi|430439540|gb|ELA49876.1| GTPase Der [Enterococcus faecium E0045]
gi|430443776|gb|ELA53738.1| GTPase Der [Enterococcus faecium E0120]
gi|430482883|gb|ELA59982.1| GTPase Der [Enterococcus faecium E0333]
gi|430483626|gb|ELA60694.1| GTPase Der [Enterococcus faecium E0269]
gi|430486275|gb|ELA63134.1| GTPase Der [Enterococcus faecium E0679]
gi|430491308|gb|ELA67781.1| GTPase Der [Enterococcus faecium E0688]
gi|430536143|gb|ELA76520.1| GTPase Der [Enterococcus faecium E1185]
gi|430538958|gb|ELA79227.1| GTPase Der [Enterococcus faecium E1133]
gi|430545209|gb|ELA85195.1| GTPase Der [Enterococcus faecium E1552]
gi|430548041|gb|ELA87946.1| GTPase Der [Enterococcus faecium E1392]
gi|430553975|gb|ELA93649.1| GTPase Der [Enterococcus faecium E1574]
gi|430559031|gb|ELA98413.1| GTPase Der [Enterococcus faecium E1575]
gi|430572147|gb|ELB11013.1| GTPase Der [Enterococcus faecium E1620]
gi|430584159|gb|ELB22509.1| GTPase Der [Enterococcus faecium E1627]
gi|430586973|gb|ELB25207.1| GTPase Der [Enterococcus faecium E1630]
gi|430587681|gb|ELB25902.1| GTPase Der [Enterococcus faecium E1634]
gi|430594452|gb|ELB32421.1| GTPase Der [Enterococcus faecium E1731]
gi|430603062|gb|ELB40605.1| GTPase Der [Enterococcus faecium E1904]
gi|430606889|gb|ELB44226.1| GTPase Der [Enterococcus faecium E2071]
gi|430609945|gb|ELB47117.1| GTPase Der [Enterococcus faecium E2134]
gi|430613078|gb|ELB50101.1| GTPase Der [Enterococcus faecium E2297]
gi|430618979|gb|ELB55807.1| GTPase Der [Enterococcus faecium E2883]
gi|430626990|gb|ELB63533.1| GTPase Der [Enterococcus faecium E3346]
gi|430627065|gb|ELB63601.1| GTPase Der [Enterococcus faecium E4215]
gi|430631988|gb|ELB68279.1| GTPase Der [Enterococcus faecium E1321]
gi|430635299|gb|ELB71395.1| GTPase Der [Enterococcus faecium E1644]
gi|430637409|gb|ELB73425.1| GTPase Der [Enterococcus faecium E2369]
gi|430641575|gb|ELB77376.1| GTPase Der [Enterococcus faecium E2560]
gi|430643848|gb|ELB79551.1| GTPase Der [Enterococcus faecium E4389]
gi|430647677|gb|ELB83118.1| GTPase Der [Enterococcus faecium E6012]
gi|430647760|gb|ELB83199.1| GTPase Der [Enterococcus faecium E6045]
Length = 436
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 186/314 (59%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYAKGEWLGREFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
+G E P M I+ QA AIEE+ VII +V
Sbjct: 62 ----------------DLGDE--------------PFMDQIKHQAEIAIEEADVIICVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L ++ +K +ILAVNK ++P + EF+SLG P P+S
Sbjct: 92 GREGVTDADEMVAKILYRS--NKPVILAVNKVDNPEMR-NDIYEFYSLGLGDPYPVSGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD E K E E+++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGIGDILD----EAVKYFSEETEEEDDDTI-KFSLIGRPNVGKSSLINAILGEERVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F GQKF +IDTAG+RKR + + TE SV RA RAI RSD+
Sbjct: 204 DIEGTTRDAIDTHFVSESGQKFLMIDTAGMRKRGKVYEN---TEKYSVMRAMRAIDRSDI 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 41/187 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R IV D G TRD + F E +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIVSDIEGTTRDAI-DTHFVSESGQKFLMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KRGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ +A + + + II+ VNK + +K + EF L ++P+
Sbjct: 268 EEGIREQDKRVAGYAHE--AGRGIIIVVNKWDLVKKETNTMRDFEQEIRDEFRYLDYAPI 325
Query: 335 P-ISAIS 340
+SA++
Sbjct: 326 VFVSAVT 332
>gi|421873079|ref|ZP_16304695.1| ribosome-associated GTPase EngA [Brevibacillus laterosporus GI-9]
gi|372458025|emb|CCF14244.1| ribosome-associated GTPase EngA [Brevibacillus laterosporus GI-9]
Length = 437
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/315 (44%), Positives = 183/315 (58%), Gaps = 45/315 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNRL+G AIV D+PGVTRDR+Y + W EF ++DTGG
Sbjct: 3 LPVVAIVGRPNVGKSTIFNRLIGERVAIVEDKPGVTRDRLYAKGEWLNREFHVIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I A + + +M QA AI+E+ VII +VD
Sbjct: 61 -----------------------IEFAETDQILTQM----RYQAELAIDEADVIILIVDV 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
++G+T AD +A L N K I+LAVNK ++ + EF+ LG P PIS G
Sbjct: 94 RSGVTDADLNVARML--NRTGKPIVLAVNKVDNFEMR-NDIYEFYQLGVGEPFPISGSHG 150
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENR--IPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G G++LD V L V+ EEE R + ++I+GRPNVGKSS+ NA++GE+R IV
Sbjct: 151 LGLGDMLDEVFHHLPPVD------EEEKRDDVIRVSIIGRPNVGKSSLTNAILGEERVIV 204
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S I+GTTRDAIDT F +GQ++ L+DTAG+RK+ + TE SV RA +AI SD
Sbjct: 205 SEIAGTTRDAIDTPFV-RDGQEYVLVDTAGMRKKGKVYEG---TEKYSVMRALKAIEDSD 260
Query: 460 VVALVIEAMACITEQ 474
VV +VI I EQ
Sbjct: 261 VVLVVINGEEGIIEQ 275
>gi|269926863|ref|YP_003323486.1| small GTP-binding protein [Thermobaculum terrenum ATCC BAA-798]
gi|269790523|gb|ACZ42664.1| small GTP-binding protein [Thermobaculum terrenum ATCC BAA-798]
Length = 448
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 143/315 (45%), Positives = 184/315 (58%), Gaps = 39/315 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV-- 221
P VAIVGRPNVGKS FNRL+G AIV DEPG TRDR+YG W F +VDTGG+
Sbjct: 5 PIVAIVGRPNVGKSTFFNRLLGERAAIVQDEPGTTRDRLYGEVSWRGRTFTIVDTGGLET 64
Query: 222 -LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
++ S +P+ + M+ QA AI E+ +I+F++
Sbjct: 65 SVDSSSDEPDPIR--------------------------RMVREQAEQAIREADLIVFMI 98
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
D + G T +D EIAD LR+ +K ILAVNK +SP++ V EF+SLG P+P+SA
Sbjct: 99 DVKTGPTPSDYEIADLLRRT--NKPTILAVNKADSPQREYEAV-EFYSLGMGDPIPVSAY 155
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G G LLD V L E+ EE + IAIVGRPNVGKS +LNA++G++R IV
Sbjct: 156 HGMGITPLLDRVVELLPPE--EEEEEEETGPVVRIAIVGRPNVGKSRLLNAILGQERAIV 213
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S + GTTRD +DTE + Q+ LIDTAGIR+R + S E SV R RAI RSD
Sbjct: 214 SDVPGTTRDPVDTEIQWGD-QRIVLIDTAGIRRRGKVESG---IEQYSVFRTLRAIGRSD 269
Query: 460 VVALVIEAMACITEQ 474
VV L+I+A +T Q
Sbjct: 270 VVLLLIDAQEGLTAQ 284
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 77/150 (51%), Gaps = 29/150 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+AIVGRPNVGKS L N ++G RAIV D PG TRD + WG+ +L+DT G+
Sbjct: 187 RIAIVGRPNVGKSRLLNAILGQERAIVSDVPGTTRDPVDTEIQWGDQRIVLIDTAGIRRR 246
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + I E ++ T+ AI S V++ L+D Q
Sbjct: 247 GKVESGI-EQYSVFRTL--------------------------RAIGRSDVVLLLIDAQE 279
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE 314
GLTA DE IA ++ + Y K ++L VNK +
Sbjct: 280 GLTAQDEHIAGYVLEEY--KGLVLVVNKWD 307
>gi|323486971|ref|ZP_08092286.1| hypothetical protein HMPREF9474_04037 [Clostridium symbiosum
WAL-14163]
gi|323692018|ref|ZP_08106266.1| GTP-binding protein engA [Clostridium symbiosum WAL-14673]
gi|355628115|ref|ZP_09049605.1| GTP-binding protein engA [Clostridium sp. 7_3_54FAA]
gi|323399743|gb|EGA92126.1| hypothetical protein HMPREF9474_04037 [Clostridium symbiosum
WAL-14163]
gi|323503941|gb|EGB19755.1| GTP-binding protein engA [Clostridium symbiosum WAL-14673]
gi|354819922|gb|EHF04355.1| GTP-binding protein engA [Clostridium sp. 7_3_54FAA]
Length = 444
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 188/312 (60%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN L G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 6 PVVAVVGRPNVGKSTLFNVLAGDMISIVKDTPGVTRDRIYADCTWLDKAFTLIDTGGI-- 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ T++ +A+M QA AI + VIIF+VD +
Sbjct: 64 ----EPD-------------------TKDVILAQM----REQAEIAIATADVIIFIVDVR 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +D ++AD LRK+ K ++LAVNK +S +K V EF++LG P+ ISA S
Sbjct: 97 QGLTDSDSKVADMLRKS--KKPVVLAVNKVDSFQKFGNDVYEFYNLGIGDPVGISAASRL 154
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G GELLD V S + G E+ E P IAIVG+PNVGKSSI+N L+GE+R IVS I
Sbjct: 155 GLGELLDAVVSHFEDGTGEEEEDER----PRIAIVGKPNVGKSSIINKLLGENRVIVSDI 210
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DTE G ++ IDTAG+R+++ I E S+ R A+ R+DVV
Sbjct: 211 AGTTRDAVDTEII-HNGTEYVFIDTAGLRRKSKIKEE---LERYSIIRTVTAVERADVVL 266
Query: 463 LVIEAMACITEQ 474
+VI+A+ +TEQ
Sbjct: 267 VVIDAVEGVTEQ 278
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVG+PNVGKS++ N+L+G NR IV D G TRD + E++ +DT G+
Sbjct: 180 PRIAIVGKPNVGKSSIINKLLGENRVIVSDIAGTTRDAVDTEIIHNGTEYVFIDTAGLRR 239
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + +E +I T+ A+E + V++ ++D
Sbjct: 240 KSKIKEE-LERYSIIRTV--------------------------TAVERADVVLVVIDAV 272
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----L 334
G+T D +IA + K II+ VNK ++ K + E+ +L F P +
Sbjct: 273 EGVTEQDAKIAGIAHER--GKGIIIVVNKWDAIEKTDKTIYEYTNKIKMTLSFIPYAEFI 330
Query: 335 PISAISGTGTGELLDLV 351
ISA +G +L +++
Sbjct: 331 FISAATGQRINKLYEII 347
>gi|407474170|ref|YP_006788570.1| GTP-binding protein EngA [Clostridium acidurici 9a]
gi|407050678|gb|AFS78723.1| GTP-binding protein EngA [Clostridium acidurici 9a]
Length = 439
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 185/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+VG +IV D+PGVTRDR+Y + W F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIVGERISIVEDKPGVTRDRIYAEAEWLNKYFTLIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK D+ + S + RQA AIE VI+F+VDG
Sbjct: 64 ESK-------DIIL----------------------SQMRRQAEIAIETGDVILFVVDGL 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
GLT+ D E+A+ LR++ K ++L NK ++P K + EF+ LG SP+ ISA
Sbjct: 95 EGLTSTDREVAEMLRRS--GKEVLLVCNKIDTP-KNPDSIYEFYELGLGSPIVISAGQSL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + + TE E+ + +A++G+PN GKSS++N ++GE+R IVS I
Sbjct: 152 GLGDLLDEVIGHFPEDKDTE----YEDDVIKVAVIGKPNAGKSSLINKVLGENRVIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT FT E K+ LIDTAG+R++ + S E SV R AI RSDV
Sbjct: 208 AGTTRDAIDTPFTRGE-DKYVLIDTAGLRRKKNVDES---IERYSVIRTLMAIERSDVCV 263
Query: 463 LVIEAMACITEQ 474
++I+A +TEQ
Sbjct: 264 IMIDATEGVTEQ 275
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 49/216 (22%)
Query: 154 TIGNVPEHL-------LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
IG+ PE + +VA++G+PN GKS+L N+++G NR IV D G TRD +
Sbjct: 160 VIGHFPEDKDTEYEDDVIKVAVIGKPNAGKSSLINKVLGENRVIVSDIAGTTRDAIDTPF 219
Query: 207 FWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQA 266
GE +++L+DT G+ + + N+ E + + I +
Sbjct: 220 TRGEDKYVLIDTAGL----RRKKNVDESIERYSVI-----------------------RT 252
Query: 267 TAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG------- 319
AIE S V + ++D G+T D +IA + N K ++ VNK ++ KG
Sbjct: 253 LMAIERSDVCVIMIDATEGVTEQDAKIAGYAHNN--GKASVIVVNKWDAIEKGDKTYLDF 310
Query: 320 ---IMQVSEFWSLGFSPLP-ISAISGTGTGELLDLV 351
+M F + ++P+ ISA +G +L DL+
Sbjct: 311 EKEVMNTLSFMT--YAPIIFISAKTGQRVNKLFDLI 344
>gi|397905173|ref|ZP_10506044.1| GTP-binding protein EngA [Caloramator australicus RC3]
gi|397161822|emb|CCJ33378.1| GTP-binding protein EngA [Caloramator australicus RC3]
Length = 439
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 184/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+LVG +IV D PGVTRDR+Y W + F LVDTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLVGKRISIVEDTPGVTRDRIYAEVEWLNYRFTLVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + ++RQA AIE + VI+F+VDG+
Sbjct: 62 ----EPE-SEDIIL----------------------KQMKRQAQIAIETADVILFMVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
GLTA D E+A+ LR+ + K ++L VNK ++ + + EF+SLG P+ ISA
Sbjct: 95 EGLTATDIEVAEMLRR--VKKPVVLVVNKIDNLKLEDNKF-EFYSLGLGEPITISAALSL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD + K E +EE + +AIVG+PNVGKSS+LN L GE+R IVS I
Sbjct: 152 GIGDMLDEIVKYFKDKEAD----DEEEPLIKVAIVGKPNVGKSSLLNRLTGEERAIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID+ G+KF IDTAGIR+++ I E SV R+ AI R+DV
Sbjct: 208 PGTTRDAIDS-LVEINGEKFLFIDTAGIRRKSKIKEE---IEKYSVIRSLAAIDRADVCL 263
Query: 463 LVIEAMACITEQ 474
++I+A +TEQ
Sbjct: 264 IMIDATEGVTEQ 275
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 38/201 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E L +VAIVG+PNVGKS+L NRL G RAIV D PG TRD + +F+ +DT
Sbjct: 173 EEPLIKVAIVGKPNVGKSSLLNRLTGEERAIVSDIPGTTRDAIDSLVEINGEKFLFIDTA 232
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ SK I E++ + I ++ AAI+ + V + +
Sbjct: 233 GIRRKSK----IKEEIEKYSVI-----------------------RSLAAIDRADVCLIM 265
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGF 331
+D G+T DE+IA + K I++ VNK + K ++E+ + + +
Sbjct: 266 IDATEGVTEQDEKIAGIAHE--AGKGIVIVVNKWDLIEKDDKTMNEYNNKIRTALSFMTY 323
Query: 332 SP-LPISAISGTGTGELLDLV 351
+P + ISA +G +L+DL+
Sbjct: 324 APIIYISAKTGQRVTKLIDLI 344
>gi|374385579|ref|ZP_09643082.1| ribosome-associated GTPase EngA [Odoribacter laneus YIT 12061]
gi|373225281|gb|EHP47615.1| ribosome-associated GTPase EngA [Odoribacter laneus YIT 12061]
Length = 435
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/304 (44%), Positives = 176/304 (57%), Gaps = 43/304 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL+G +AIV +E GVTRDR YG+S W EF ++DTGG VS
Sbjct: 5 VAIVGRPNVGKSTLFNRLIGSRKAIVNEESGVTRDRNYGKSEWNGKEFSVIDTGGY--VS 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
S E+ I +Q AIEE+ VI+F+VD + G
Sbjct: 63 NSDDIFEEE---------------------------INKQVLLAIEEADVILFMVDTEIG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP--LPISAISGTG 343
LT D+ A LR + K I L NK ++ + I SEF+ LG + IS+ +G G
Sbjct: 96 LTDLDQNFAKLLRN--IQKPIYLVANKVDTSER-IYDASEFYRLGINSDLFCISSANGFG 152
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
TGELLD + S + D VE + +P I IVGRPNVGKSS +NAL+GE+R IV+ I+
Sbjct: 153 TGELLDKITSHFQT-----DSVESTDHLPRITIVGRPNVGKSSTINALIGEERNIVTEIA 207
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRD++ T + G F L+DTAG+RK+A + E SV R+ RAI SDV L
Sbjct: 208 GTTRDSLYTRY-NRFGHDFLLVDTAGLRKKAKV---NEDVEFYSVMRSVRAIEDSDVCML 263
Query: 464 VIEA 467
+I+A
Sbjct: 264 LIDA 267
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 29/150 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR+ IVGRPNVGKS+ N L+G R IV + G TRD +Y R H+F+LVDT G+
Sbjct: 175 LPRITIVGRPNVGKSSTINALIGEERNIVTEIAGTTRDSLYTRYNRFGHDFLLVDTAGL- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + ED+ + + ++ AIE+S V + L+D
Sbjct: 234 ---RKKAKVNEDVEFYSVM-----------------------RSVRAIEDSDVCMLLIDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNK 312
G+ A D I + +N K +++ +NK
Sbjct: 268 TRGMEAQDLNIFHLIERN--RKGVVILINK 295
>gi|309809326|ref|ZP_07703195.1| ribosome biogenesis GTPase Der [Lactobacillus iners SPIN 2503V10-D]
gi|308170439|gb|EFO72463.1| ribosome biogenesis GTPase Der [Lactobacillus iners SPIN 2503V10-D]
Length = 435
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/313 (42%), Positives = 185/313 (59%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+PGVTRDR+Y + W +F+LVDTGG+
Sbjct: 3 LPVVALVGRPNVGKSTIFNRIINSRVAIVEDQPGVTRDRIYANAQWMGKQFVLVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ N++E+ I+ QA AI E+ VI+ L D
Sbjct: 62 ---TFEDNVIEE--------------------------QIKTQAEIAINEADVIVMLSDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L K K IILA+NK ++P + + +F+SLG P+P+S G
Sbjct: 93 TGHVTNLDETIAKILYK--AKKPIILAINKADNPEQR-NDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + S+ T+D +N I +I+GRPNVGKSSI+N+++GE+R IV+
Sbjct: 150 TGLGDLLDAIVSKFDGNNTTDD----DNNI-RFSIIGRPNVGKSSIVNSILGENRVIVAD 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
+ GTTRDAIDT F +GQK+ ++DTAGIR++ + E SV R+ AI +SDV
Sbjct: 205 MEGTTRDAIDTIFE-KDGQKYTIVDTAGIRRKGKVYEK---VEKYSVMRSISAIEQSDVA 260
Query: 462 ALVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 261 IIVIDASVGIIEQ 273
>gi|302386477|ref|YP_003822299.1| ribosome-associated GTPase EngA [Clostridium saccharolyticum WM1]
gi|302197105|gb|ADL04676.1| ribosome-associated GTPase EngA [Clostridium saccharolyticum WM1]
Length = 442
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 143/312 (45%), Positives = 187/312 (59%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAGDTISIVKDTPGVTRDRIYADCTWLDMNFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ D+ + S + QA AI + VIIF+VD +
Sbjct: 62 ----EPD-SSDIIL----------------------SQMREQAEIAIATADVIIFIVDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD ++AD LRK+ K I+LAVNK +S +K V EF++LG P+P+SA S
Sbjct: 95 QGLVDADSKVADMLRKS--KKPIVLAVNKVDSFQKFGNDVYEFYNLGIGDPIPVSAASRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V E E EE++R P IAIVG+PNVGKSSI+N L+GE+R IVS I
Sbjct: 153 GLGDLLDEVAKHFDLSETEE---EEDDR-PRIAIVGKPNVGKSSIINQLLGENRVIVSNI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DTE EG ++ IDTAG+R+++ I E S+ R A+ R+DVV
Sbjct: 209 AGTTRDAVDTEIV-HEGTEYVFIDTAGLRRKSKIKEE---LERYSIIRTVTAVERADVVV 264
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 265 VVIDAEEGVTEQ 276
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVG+PNVGKS++ N+L+G NR IV + G TRD + E++ +DT G+
Sbjct: 178 PRIAIVGKPNVGKSSIINQLLGENRVIVSNIAGTTRDAVDTEIVHEGTEYVFIDTAGLRR 237
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + +E +I T+ A+E + V++ ++D +
Sbjct: 238 KSKIKEE-LERYSIIRTV--------------------------TAVERADVVVVVIDAE 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSPLP--- 335
G+T D +IA + K I++AVNK ++ K + E+ +L F P
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGIVVAVNKWDAIEKNDKTIYEYTNKIKNTLSFMPYAEFV 328
Query: 336 -ISAISGTGTGELLDLV 351
ISA +G +L +++
Sbjct: 329 FISAKTGLRMNKLFEVI 345
>gi|398813287|ref|ZP_10571986.1| ribosome-associated GTPase EngA [Brevibacillus sp. BC25]
gi|398038948|gb|EJL32094.1| ribosome-associated GTPase EngA [Brevibacillus sp. BC25]
Length = 437
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/313 (43%), Positives = 181/313 (57%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNRL+G AIV D PGVTRDR+YG+ W H F ++DTGG
Sbjct: 3 LPVVAIVGRPNVGKSTIFNRLIGQRVAIVEDMPGVTRDRLYGKGEWLTHTFHVIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + + +M QA AI+E+ VII + D
Sbjct: 61 -----------------------IEFGETDEILTQM----RYQAELAIDEADVIIMIADS 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T AD E++ L N K ++LAVNK ++P + +F+SLG P P+S G
Sbjct: 94 RTGVTDADVELSRML--NRTGKPVVLAVNKADNPEMR-ADIYDFYSLGLGEPFPVSGSHG 150
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G G++L+ V ED E+ + + ++I+GRPNVGKSS+ NAL+GE+R IVS
Sbjct: 151 LGLGDMLEDVVQHFP----AEDDEEKRDDVIRVSIIGRPNVGKSSLTNALLGEERVIVSD 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT F + Q + L+DTAG+RKR + TTE SV RA R+I SDVV
Sbjct: 207 VAGTTRDAIDTPFE-RDDQSYILVDTAGMRKRGKVY---ETTEKYSVMRAMRSIEDSDVV 262
Query: 462 ALVIEAMACITEQ 474
+VI+ I EQ
Sbjct: 263 LVVIDGEEGIIEQ 275
>gi|381210191|ref|ZP_09917262.1| GTP-binding protein Der [Lentibacillus sp. Grbi]
Length = 436
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/311 (43%), Positives = 187/311 (60%), Gaps = 44/311 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNRLVG +IV D PGVTRDR+Y + W F ++DTGG
Sbjct: 6 VAIVGRPNVGKSTIFNRLVGERISIVEDTPGVTRDRVYAEAEWLTTTFNVIDTGG----- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
I M PL + + +QA AI+E+ VIIFL++G+ G
Sbjct: 61 ---------------IEMSDEPLLVQ----------MRQQAEIAIDEADVIIFLLNGREG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIM-QVSEFWSLGFS-PLPISAISGTG 343
+TAADEE+A L K+ +K + LAVNK ++P G+ ++ E+++LGF P PIS G G
Sbjct: 96 ITAADEEVAKILYKS--NKPVALAVNKIDNP--GMRDEIYEYYALGFGEPYPISGAHGLG 151
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
G+LLD V ++ E ++ +++GRPNVGKSS++NA++ E+R IVS
Sbjct: 152 LGDLLDAVVGYFPEIHDPE----PDDDTIYFSVIGRPNVGKSSLVNAMLNEERVIVSEQE 207
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRDA+DT + + Q F +IDTAG+RKR + + TE SV RA +AI RSDVV +
Sbjct: 208 GTTRDAVDT-YLHKDDQDFVIIDTAGMRKRGKVYEA---TEKYSVLRALKAIERSDVVLV 263
Query: 464 VIEAMACITEQ 474
+I+A I EQ
Sbjct: 264 LIDAETGIREQ 274
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 35/191 (18%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS+L N ++ R IV ++ G TRD + + +F+++DT G+ +
Sbjct: 179 SVIGRPNVGKSSLVNAMLNEERVIVSEQEGTTRDAVDTYLHKDDQDFVIIDTAGM----R 234
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E AT + +V R A AIE S V++ L+D + G+
Sbjct: 235 KRGKVYE---------------ATEKYSVLR--------ALKAIERSDVVLVLIDAETGI 271
Query: 287 TAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPL---PISAIS 340
D++IA + + + II+ VNK E+ K + + + GF L PI +S
Sbjct: 272 REQDKKIAGYAHE--AGRSIIIVVNKWDTVETDEKTMKEFEQKVRAGFQYLDYAPIVFLS 329
Query: 341 GTGTGELLDLV 351
L L+
Sbjct: 330 AKTRKRLHTLI 340
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAG 429
R +AIVGRPNVGKS+I N LVGE +IV G TRD + E F +IDT G
Sbjct: 2 RKSVVAIVGRPNVGKSTIFNRLVGERISIVEDTPGVTRDRVYAEAEWLT-TTFNVIDTGG 60
Query: 430 I 430
I
Sbjct: 61 I 61
>gi|302871345|ref|YP_003839981.1| ribosome-associated GTPase EngA [Caldicellulosiruptor obsidiansis
OB47]
gi|302574204|gb|ADL41995.1| ribosome-associated GTPase EngA [Caldicellulosiruptor obsidiansis
OB47]
Length = 440
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 191/312 (61%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL+G RAIV D PG+TRDR+ G + W F ++DTGG+
Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIIGEAEWRGITFNVIDTGGIEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S ED+ + + RQA AI+ S VIIF+VDG+
Sbjct: 63 YS-------EDIIL----------------------KQMRRQAQFAIDMSDVIIFIVDGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD+E+A+ LR + K I+LAVNK ++ + M + EF+ LG S P+ +SA GT
Sbjct: 94 TGLTDADKEVANMLRTS--KKPIVLAVNKIDNISQEPM-IYEFYELGLSDPIAMSAEHGT 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + L V G ++ EEN I +AI+G+PN GKSS++N ++GE+R IVS I
Sbjct: 151 GVGDVLDAVVNYLDNV-GINEI--EENTI-KVAIIGKPNTGKSSLVNYILGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID+ F EG LIDTAG+R+++ I + E S+ R +AI RSD+
Sbjct: 207 PGTTRDAIDSTFEF-EGIPITLIDTAGLRRKSKIYDN---VERYSMLRTLQAIERSDICI 262
Query: 463 LVIEAMACITEQ 474
++++ ++EQ
Sbjct: 263 ILLDGTEGVSEQ 274
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 90/205 (43%), Gaps = 54/205 (26%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PN GKS+L N ++G R IV D PG TRD
Sbjct: 177 KVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRD------------------------ 212
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMI----ER----QATAAIEESCVI 276
AI +T EGIP+ + A R S I ER + AIE S +
Sbjct: 213 -----------AIDSTFEFEGIPITLIDTAGLRRKSKIYDNVERYSMLRTLQAIERSDIC 261
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-------- 328
I L+DG G++ D ++A + + K I+AVNK ++ K E+
Sbjct: 262 IILLDGTEGVSEQDAKVAGYAYE--AGKGCIVAVNKWDAVEKDEKTADEYKKQIEEKLSF 319
Query: 329 LGFSP-LPISAISGTGTGELLDLVC 352
L F+P L ISA +G +LL+ V
Sbjct: 320 LKFAPVLFISAKTGFRVKKLLETVL 344
>gi|430825064|ref|ZP_19443275.1| GTPase Der [Enterococcus faecium E0164]
gi|430446565|gb|ELA56233.1| GTPase Der [Enterococcus faecium E0164]
Length = 436
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 186/314 (59%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYAKGEWLGREFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
+G E P M I+ QA AIEE+ VII +V
Sbjct: 62 ----------------DLGDE--------------PFMDQIKHQAEIAIEEADVIICVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L ++ +K +ILAVNK ++P + EF+SLG P P+S
Sbjct: 92 GREGVTDADEMVAKILYRS--NKPVILAVNKVDNPEMR-NDIYEFYSLGLGDPYPVSGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD E K E E+++ I +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGIGDILD----EAVKYFSEETEEEDDDTI-KFSLIGRPNVGKSSLINAILGEERVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F GQKF +IDTAG+RKR + + TE SV RA RAI RSD+
Sbjct: 204 DIEGTTRDAIDTHFVSESGQKFLMIDTAGMRKRGKVYEN---TEKYSVMRAMRAIDRSDI 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 32/164 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R IV D G TRD + F E +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIVSDIEGTTRDAI-DTHFVSESGQKFLMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KRGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+ G+ D+ +A + + + II+ VNK + +K + +F
Sbjct: 268 EEGIREQDKRVAGYAHE--AGRGIIIVVNKWDLVKKETNTMRDF 309
>gi|309805732|ref|ZP_07699772.1| ribosome biogenesis GTPase Der [Lactobacillus iners LactinV 09V1-c]
gi|309807723|ref|ZP_07701658.1| ribosome biogenesis GTPase Der [Lactobacillus iners LactinV 01V1-a]
gi|312875513|ref|ZP_07735516.1| ribosome biogenesis GTPase Der [Lactobacillus iners LEAF 2053A-b]
gi|315653509|ref|ZP_07906430.1| ribosome-associated GTPase EngA [Lactobacillus iners ATCC 55195]
gi|308164985|gb|EFO67228.1| ribosome biogenesis GTPase Der [Lactobacillus iners LactinV 09V1-c]
gi|308169034|gb|EFO71117.1| ribosome biogenesis GTPase Der [Lactobacillus iners LactinV 01V1-a]
gi|311089024|gb|EFQ47465.1| ribosome biogenesis GTPase Der [Lactobacillus iners LEAF 2053A-b]
gi|315489200|gb|EFU78841.1| ribosome-associated GTPase EngA [Lactobacillus iners ATCC 55195]
Length = 435
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/313 (42%), Positives = 185/313 (59%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+PGVTRDR+Y + W +F+LVDTGG+
Sbjct: 3 LPVVALVGRPNVGKSTIFNRIINSRVAIVEDQPGVTRDRIYANAQWMGKQFVLVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ N++E+ I+ QA AI E+ VI+ L D
Sbjct: 62 ---TFEDNVIEE--------------------------QIKTQAEIAINEADVIVMLSDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L K K IILA+NK ++P + + +F+SLG P+P+S G
Sbjct: 93 TGHVTNLDETIAKILYK--AKKPIILAINKADNPEQR-NDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD + S+ T+D +N I +I+GRPNVGKSSI+N+++GE+R IV+
Sbjct: 150 TGLGDLLDAIVSKFDGNNTTDD----DNNI-RFSIIGRPNVGKSSIVNSILGENRVIVAD 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
+ GTTRDAIDT F +GQK+ ++DTAGIR++ + E SV R+ AI +SDV
Sbjct: 205 MEGTTRDAIDTIFE-KDGQKYTIVDTAGIRRKGKVYEK---VEKYSVMRSISAIEQSDVA 260
Query: 462 ALVIEAMACITEQ 474
+VI+A I EQ
Sbjct: 261 IIVIDASVGIIEQ 273
>gi|168186800|ref|ZP_02621435.1| GTP-binding protein EngA [Clostridium botulinum C str. Eklund]
gi|169295122|gb|EDS77255.1| GTP-binding protein EngA [Clostridium botulinum C str. Eklund]
Length = 438
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 183/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVDDMPGVTRDRIYAEAEWLNNNFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + VA+M RQA AIE + V++F+VDG+
Sbjct: 62 ----EPE-------------------NDDIIVAQM----RRQAQLAIEMADVVLFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A LRK +K I+LAVNK + R+ + EF++LG P+PISA G
Sbjct: 95 QGLTDADREVAHMLRK--ANKSIVLAVNKIDR-RQLDDNIYEFYNLGLGEPMPISASQGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + G E EE+ IA++GRPNVGKSS++N ++GE++ IVS I
Sbjct: 152 GLGDLLDEVVGKFPDFNGEE----EEDEYIRIAMIGRPNVGKSSLINRILGEEKHIVSNI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDA+D+ EG KF LIDTAG+R+++ I E S R +I +DV
Sbjct: 208 PGTTRDAVDSYIETEEG-KFVLIDTAGLRRKSKIKEQ---VERYSAVRTLASIENADVCI 263
Query: 463 LVIEAMACITEQ 474
L+I+A I EQ
Sbjct: 264 LMIDATEDIAEQ 275
>gi|420145959|ref|ZP_14653403.1| GTPase Der (GTP-binding protein EngA) [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
gi|398402348|gb|EJN55699.1| GTPase Der (GTP-binding protein EngA) [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
Length = 436
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/313 (43%), Positives = 187/313 (59%), Gaps = 44/313 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W HEF L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTVFNRIAGQRVSIVDDAPGVTRDRIYTSAEWLGHEFNLIDTGGIDI 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V QP + + I+ QA AIEE+ VI+F+ +
Sbjct: 64 V--DQPFVEQ----------------------------IKEQAEIAIEEADVIVFVTSVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ-VSEFWSLGF-SPLPISAISG 341
G+T ADE +A L + DK ++LAVNK ++ + + Q + ++++LGF P+ IS + G
Sbjct: 94 EGITDADENVARILYCS--DKPVVLAVNKVDN--QDLRQDIYDYYALGFDEPIGISGVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G G+LLD + T+ E+E+RI +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 150 IGVGDLLDAIIKHFP----TDIEPEDESRI-RFSLIGRPNVGKSSLVNAILGENRVIVSD 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDAIDT F G +F +IDTAG+RKR + E SV RA AI RSDVV
Sbjct: 205 IAGTTRDAIDTRFAAANGTEFNMIDTAGLRKR---GKAYENAEKYSVLRAMSAIDRSDVV 261
Query: 462 ALVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 262 LVVLNAEEGIREQ 274
>gi|134299023|ref|YP_001112519.1| GTP-binding protein EngA [Desulfotomaculum reducens MI-1]
gi|172044273|sp|A4J3P1.1|DER_DESRM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|134051723|gb|ABO49694.1| small GTP-binding protein [Desulfotomaculum reducens MI-1]
Length = 439
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 181/316 (57%), Gaps = 51/316 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+VG AIV D PGVTRDR+Y + W EF LVDTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRIVGARIAIVEDMPGVTRDRLYQDAEWQGREFTLVDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ ED+ + + I +QA AI E+ +I+F+VD +
Sbjct: 62 ------DFAEDI----------------------ITAQIRKQAELAIYEADIILFVVDAR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTA DEE+ LR+ DK +IL NK E K + +F+ LG P+P+SA G
Sbjct: 94 EGLTAIDEEVGRTLRR--ADKPVILVANKVEHFDK--IPYYDFYQLGLGDPVPVSAAEGL 149
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPA----IAIVGRPNVGKSSILNALVGEDRTI 398
TG+LLD + L ++E+ P IA++GRPNVGKSS++N ++GE+R I
Sbjct: 150 NTGDLLDELVKNLP--------AQDEDPYPPDTIRIAVIGRPNVGKSSLVNTILGEERVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VS I GTTRDAID+ F G+ + L+DTAG+R+R I TE SV RA RA+ R
Sbjct: 202 VSNIPGTTRDAIDSSFEK-NGKNYVLVDTAGMRRRKKI---DLPTERYSVVRALRAVDRC 257
Query: 459 DVVALVIEAMACITEQ 474
DV +V +A I EQ
Sbjct: 258 DVALMVFDATEGIAEQ 273
>gi|257887716|ref|ZP_05667369.1| GTP-binding protein engA [Enterococcus faecium 1,141,733]
gi|424765176|ref|ZP_18192579.1| ribosome biogenesis GTPase Der [Enterococcus faecium TX1337RF]
gi|431034754|ref|ZP_19491631.1| GTPase Der [Enterococcus faecium E1590]
gi|431756350|ref|ZP_19544982.1| GTPase Der [Enterococcus faecium E3083]
gi|257823770|gb|EEV50702.1| GTP-binding protein engA [Enterococcus faecium 1,141,733]
gi|402417198|gb|EJV49502.1| ribosome biogenesis GTPase Der [Enterococcus faecium TX1337RF]
gi|430563469|gb|ELB02678.1| GTPase Der [Enterococcus faecium E1590]
gi|430620204|gb|ELB57006.1| GTPase Der [Enterococcus faecium E3083]
Length = 436
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/314 (43%), Positives = 182/314 (57%), Gaps = 46/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYAKGEWLGREFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM--IERQATAAIEESCVIIFLVD 281
+G E P M I+ QA AIEE+ VII +V
Sbjct: 62 ----------------DLGDE--------------PFMDQIKHQAEIAIEEADVIICVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L ++ +K +ILAVNK ++P + EF+SLG P P+S
Sbjct: 92 GREGVTDADEMVAKILYRS--NKPVILAVNKVDNPEMR-NDIYEFYSLGLGDPYPVSGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G++LD + ED + +++GRPNVGKSS++NA++GE+R IVS
Sbjct: 149 GLGIGDILDEAVKYFTEETEEEDDDTIK-----FSLIGRPNVGKSSLINAILGEERVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRDAIDT F GQKF +IDTAG+RKR + + TE SV RA RAI RSD+
Sbjct: 204 DIEGTTRDAIDTHFVSESGQKFLMIDTAGMRKRGKVYEN---TEKYSVMRAMRAIDRSDI 260
Query: 461 VALVIEAMACITEQ 474
V +V+ A I EQ
Sbjct: 261 VLMVLNAEEGIREQ 274
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 41/187 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R IV D G TRD + F E +F+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIVSDIEGTTRDAI-DTHFVSESGQKFLMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KRGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ +A + + + +I+ VNK + +K + EF L ++P+
Sbjct: 268 EEGIREQDKRVAGYAHE--AGRGVIIVVNKWDLVKKETNTMRDFEQEIRDEFRYLDYAPI 325
Query: 335 P-ISAIS 340
+SA++
Sbjct: 326 VFVSAVT 332
>gi|366053178|ref|ZP_09450900.1| GTP-binding protein Der [Lactobacillus suebicus KCTC 3549]
Length = 436
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/311 (41%), Positives = 188/311 (60%), Gaps = 42/311 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W F L+DTGG
Sbjct: 4 PVVAVVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYAHGEWIGKNFNLIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + P T+ I +QA AI+E+ VI+F+VD +
Sbjct: 61 -----------------IEISDQPFVTQ----------IRQQAEIAIDEADVIVFIVDIK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K ++LAVNK ++ ++ +V +F+SLGF P PIS + G
Sbjct: 94 TGMTDADEQVAQILYRS--NKPVVLAVNKVDN-QELRSEVYDFYSLGFGEPYPISGVHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + +++ EE+ +++GRPNVGKSS++NA++GE R IVS I
Sbjct: 151 GIGDLLDAVVNNFP-----DNVDNEEDDSIRFSLIGRPNVGKSSLVNAILGEHRVIVSNI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT+FT + +F ++DTAG++KR I + TE ++ RA +AI SD+V
Sbjct: 206 AGTTRDAIDTKFTTEDDTEFTMVDTAGMKKRGKIYEN---TERYAMLRAMKAIDDSDIVL 262
Query: 463 LVIEAMACITE 473
+V+ A I E
Sbjct: 263 VVLNAEEGIRE 273
>gi|149277444|ref|ZP_01883585.1| GTP-binding protein EngA [Pedobacter sp. BAL39]
gi|149231677|gb|EDM37055.1| GTP-binding protein EngA [Pedobacter sp. BAL39]
Length = 433
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 185/312 (59%), Gaps = 47/312 (15%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS LFNRL +AIV D GVTRDR YG + W + +F ++DTGG + S
Sbjct: 5 IAIVGRPNVGKSTLFNRLTESRKAIVDDFSGVTRDRHYGSAEWTDKQFTVIDTGGYVANS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
ED+ EAA I Q AIEE+ V++F+VD G
Sbjct: 65 -------EDVF---------------EAA-------IREQVVIAIEEATVLLFMVDVVTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEFWSLGFSPL-PISAISGT 342
+T D++IA LR++ FI+ VNK ++ + +Q S F+ G + PIS+++G+
Sbjct: 96 ITDLDDDIAQLLRRSKKPVFIV--VNKVDNTQ---LQNDASVFYGFGLGEIYPISSMTGS 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD V ED+ EEEN +P I IVGRPNVGKSS++NAL+G++R IV+PI
Sbjct: 151 GTGDLLDEVIKHF------EDIPEEENALPKITIVGRPNVGKSSLINALIGKERNIVTPI 204
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+I + G +F IDTAG+RK+ + + E SV R +A+ +DVV
Sbjct: 205 AGTTRDSIHIHY-NQFGHEFMFIDTAGLRKKTKVKEN---IEFYSVMRTIKALEEADVVV 260
Query: 463 LVIEAMACITEQ 474
L+I+AM + Q
Sbjct: 261 LMIDAMEGLESQ 272
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 76/155 (49%), Gaps = 29/155 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E+ LP++ IVGRPNVGKS+L N L+G R IV G TRD ++ HEFM +DT
Sbjct: 170 ENALPKITIVGRPNVGKSSLINALIGKERNIVTPIAGTTRDSIHIHYNQFGHEFMFIDTA 229
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ +K + NI E ++ TI A+EE+ V++ +
Sbjct: 230 GLRKKTKVKENI-EFYSVMRTI--------------------------KALEEADVVVLM 262
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+D GL + D I KN K I++ VNK +
Sbjct: 263 IDAMEGLESQDVNIFHLAEKN--KKGIVILVNKWD 295
>gi|58337266|ref|YP_193851.1| GTP-binding protein EngA [Lactobacillus acidophilus NCFM]
gi|81311473|sp|Q5FKF4.1|DER_LACAC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|58254583|gb|AAV42820.1| phosphoglycerate dehydrogenase [Lactobacillus acidophilus NCFM]
Length = 435
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/314 (42%), Positives = 186/314 (59%), Gaps = 43/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVG+PNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F L+DTGG
Sbjct: 2 VLPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKPGVTRDRNYAQAEWMGHKFDLIDTGG- 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
I EG ++ I QA AIEE+ VI+ L +
Sbjct: 61 -------------------ITWEG----------GKIEDEIRAQAEIAIEEADVIVMLTN 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+T DE IA L + K +ILAVNK ++P + + +F+SLG P+P+S+
Sbjct: 92 VVNHVTDLDERIARLLYRT--KKPVILAVNKADNPEQR-NDIYDFYSLGLGDPIPVSSSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG G+LLD + ++ + +E + + + +++GRPNVGKSS++N L+GEDR IV+
Sbjct: 149 GTGIGDLLDEIVNDFPAEKDSE-----ADDVISFSMIGRPNVGKSSLVNKLLGEDRVIVA 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
GTTRDA+DT FT +G KF+++DTAGIR+R + TE SV RA AI RSDV
Sbjct: 204 NEEGTTRDAVDTPFT-KDGIKFKVVDTAGIRRRGKVYEK---TEKYSVLRAMSAIERSDV 259
Query: 461 VALVIEAMACITEQ 474
V LV++A I EQ
Sbjct: 260 VLLVLDASTGIREQ 273
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 42/206 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS+L N+L+G +R IV +E G TRD + +F +VDT G+ +
Sbjct: 178 SMIGRPNVGKSSLVNKLLGEDRVIVANEEGTTRDAVDTPFTKDGIKFKVVDTAGI----R 233
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E T + +V R A +AIE S V++ ++D G+
Sbjct: 234 RRGKVYE---------------KTEKYSVLR--------AMSAIERSDVVLLVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP-LPIS 337
D+ +A + + + II+ VNK + P K SEF L ++P L +S
Sbjct: 271 REQDKHVAGYAHE--AGRGIIIVVNKWDLPEKNSTSAKEFEREIRSEFQYLDYAPILFVS 328
Query: 338 AISGTGTGELLDLVCSELKKVEGTED 363
A TG+ +D + S +K+V ++
Sbjct: 329 A----KTGQRIDQIPSMVKEVYDNQN 350
>gi|399949830|gb|AFP65487.1| GTP-binding protein EngA [Chroomonas mesostigmatica CCMP1168]
Length = 529
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/315 (42%), Positives = 179/315 (56%), Gaps = 41/315 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGG--NRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
P + +VGR NVGKS L NR+ G N +IV D G+TRD+ Y R FW HEF++ DTGG
Sbjct: 88 PIITVVGRSNVGKSTLVNRISGEFENGSIVYDTDGITRDKTYRRGFWCGHEFLITDTGGF 147
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ K N E I+ QA +AI+E+ VI+F+VD
Sbjct: 148 VFDEKIFQNWTES---------------------------IKEQALSAIQEANVIVFVVD 180
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAIS 340
GQ GLT D E+A++L+ + ++LAVNKCE+ S FWSLG P+P+S I
Sbjct: 181 GQCGLTNNDLELANYLK--FQKIPVVLAVNKCENLNLFETNCSRFWSLGIGKPIPVSGIH 238
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GT T +LL+ V S L KV + EN I +AI+G+PNVGKSSILN L + R IVS
Sbjct: 239 GTNTDQLLERVTSFLPKV----NFPISENSI-KVAIIGKPNVGKSSILNFLTNKKRAIVS 293
Query: 401 PISGTTRDAIDTEFT-GPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
+ GTTRD+ D+ + G + IDTAGIRK+ I E VNR F++I++S+
Sbjct: 294 DLPGTTRDSNDSYISGGSNCNVYNFIDTAGIRKKKMIEYG---PEFFMVNRTFKSIQKSE 350
Query: 460 VVALVIEAMACITEQ 474
V VI+++ ITEQ
Sbjct: 351 CVLFVIDSLKGITEQ 365
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 367 EENRI----PAIAIVGRPNVGKSSILNALVG--EDRTIVSPISGTTRDAIDTEFTGPE-G 419
+ENR+ P I +VGR NVGKS+++N + G E+ +IV G TRD T G G
Sbjct: 79 QENRLNRRTPIITVVGRSNVGKSTLVNRISGEFENGSIVYDTDGITRDK--TYRRGFWCG 136
Query: 420 QKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQ 474
+F + DT G I + TE++ +A AI+ ++V+ V++ +T
Sbjct: 137 HEFLITDTGGFVFDEKIFQNW--TESIK-EQALSAIQEANVIVFVVDGQCGLTNN 188
>gi|401679822|ref|ZP_10811746.1| ribosome-associated GTPase EngA [Veillonella sp. ACP1]
gi|400218949|gb|EJO49820.1| ribosome-associated GTPase EngA [Veillonella sp. ACP1]
Length = 444
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 190/312 (60%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W EF ++DTG
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTG---- 59
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
GI T + V +P M+ QA AIEE+ VI+F+VDG+
Sbjct: 60 ---------------------GIEFVTENSHV--IPKMMRLQAELAIEEADVILFVVDGK 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ ADEE+A+ LR + K ++L VNK +S + + EF++LG P+ ISA +
Sbjct: 97 QGIVPADEEVANILRTS--GKPVVLVVNKIDSVNQE-PNIYEFYNLGLGDPIGISAKNLM 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V GT V+EE+ I +AI+GRPNVGKSS+ NAL+G+DR IVS +
Sbjct: 154 NLGDLLDDTVKHFPPV-GTN--VDEEDTI-HVAIIGRPNVGKSSLTNALLGQDRVIVSDV 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+IDT +T + QKF LIDTAG+R+++ I + E S+ R+ R++ RSD+V
Sbjct: 210 AGTTRDSIDTHWTHGD-QKFVLIDTAGMRRKSKIDEA---VERYSIVRSLRSVDRSDIVV 265
Query: 463 LVIEAMACITEQ 474
V++ + +TEQ
Sbjct: 266 FVLDGVDGVTEQ 277
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 34/180 (18%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
NV E VAI+GRPNVGKS+L N L+G +R IV D G TRD + G+ +F+L+
Sbjct: 172 NVDEEDTIHVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSIDTHWTHGDQKFVLI 231
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DT G+ SK I A ++ R + +++ S ++
Sbjct: 232 DTAGMRRKSK-------------------IDEAVERYSIVR--------SLRSVDRSDIV 264
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE--FWSLGF 331
+F++DG G+T D++IA + + K +I+ VNK E K ++ +E + LGF
Sbjct: 265 VFVLDGVDGVTEQDKKIAGYAYE--AGKGVIIVVNKWDLVEKDDKTTLRYTEDIYDELGF 322
>gi|339010827|ref|ZP_08643396.1| GTPase Der [Brevibacillus laterosporus LMG 15441]
gi|338772161|gb|EGP31695.1| GTPase Der [Brevibacillus laterosporus LMG 15441]
Length = 437
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 182/313 (58%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNRL+G AIV D+PGVTRDR+Y + W EF ++DTGG
Sbjct: 3 LPVVAIVGRPNVGKSTIFNRLIGERVAIVEDKPGVTRDRLYAKGEWLNREFHVIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I A + + +M QA AI+E+ VII +VD
Sbjct: 61 -----------------------IEFAETDQILTQM----RYQAELAIDEADVIILIVDV 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
++G+T AD +A L N K I+LAVNK ++ + EF+ LG P PIS G
Sbjct: 94 RSGVTDADLNVARML--NRTGKPIVLAVNKVDNFEMR-NDIYEFYQLGVGEPFPISGSHG 150
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G G++LD V L V D E+ + + ++I+GRPNVGKSS+ NA++GE+R IVS
Sbjct: 151 LGLGDMLDEVFHHLPPV----DAEEKRDDVIRVSIIGRPNVGKSSLTNAILGEERVIVSE 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDAIDT F +GQ++ L+DTAG+RK+ + TE SV RA +AI SDVV
Sbjct: 207 IAGTTRDAIDTPFV-RDGQEYVLVDTAGMRKKGKVYEG---TEKYSVMRALKAIEDSDVV 262
Query: 462 ALVIEAMACITEQ 474
+VI I EQ
Sbjct: 263 LVVINGEEGIIEQ 275
>gi|260893088|ref|YP_003239185.1| ribosome-associated GTPase EngA [Ammonifex degensii KC4]
gi|260865229|gb|ACX52335.1| ribosome-associated GTPase EngA [Ammonifex degensii KC4]
Length = 447
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/315 (45%), Positives = 184/315 (58%), Gaps = 44/315 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P V IVGRPNVGKS LFNRLVG AIV +EPGVTRDR+Y W EF+LVDTGGV+
Sbjct: 4 PVVVIVGRPNVGKSTLFNRLVGKGVAIVEEEPGVTRDRLYREVEWCGREFVLVDTGGVVE 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+S PL I RQ A+EE+ +++F+VD +
Sbjct: 64 SPES-------------------PLEV----------AIRRQVEQALEEADLVLFVVDYK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS--PLPISAISG 341
G+TA D+ IA LR+ K +L VNK + + +S+F++LG S P+P+SA G
Sbjct: 95 TGVTAEDQAIASMLRRT--GKPTLLVVNKVDKFDPPPV-LSDFYALGLSTEPIPVSAAQG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAI--AIVGRPNVGKSSILNALVGEDRTIV 399
G+LLD V L ED EE + AI AIVGRPNVGKSS++NAL+GE+R IV
Sbjct: 152 LNVGDLLDAVIDRLP----PEDREEERPQAEAIAVAIVGRPNVGKSSLVNALLGEERVIV 207
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S I GTTRDA+DT FT EGQ + LIDTAG+R+R+ I L RA +A+RR+
Sbjct: 208 SDIPGTTRDAVDTFFTW-EGQPYILIDTAGLRRRSRIKEEAERQSCL---RARQALRRAH 263
Query: 460 VVALVIEAMACITEQ 474
V LV++ +T Q
Sbjct: 264 VAVLVLDGAEGVTMQ 278
>gi|227903851|ref|ZP_04021656.1| GTP-binding protein EngA [Lactobacillus acidophilus ATCC 4796]
gi|227868738|gb|EEJ76159.1| GTP-binding protein EngA [Lactobacillus acidophilus ATCC 4796]
Length = 435
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/314 (42%), Positives = 186/314 (59%), Gaps = 43/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVG+PNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F L+DTGG
Sbjct: 2 VLPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKPGVTRDRNYAQAEWMGHKFDLIDTGG- 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
I EG ++ I QA AIEE+ VI+ L +
Sbjct: 61 -------------------ITWEG----------GKIEDEIRAQAEIAIEEADVIVMLTN 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+T DE IA L + K +ILAVNK ++P + + +F+SLG P+P+S+
Sbjct: 92 VVNHVTDLDERIARLLYRT--KKPVILAVNKADNPEQR-NDIYDFYSLGLGDPIPVSSSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG G+LLD + ++ + +E + + + +++GRPNVGKSS++N L+GEDR IV+
Sbjct: 149 GTGIGDLLDEIVNDFPAEKDSE-----ADDVISFSMIGRPNVGKSSLVNKLLGEDRVIVA 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
GTTRDA+DT FT +G KF+++DTAGIR+R + TE SV RA AI RSDV
Sbjct: 204 NEEGTTRDAVDTPFT-KDGIKFKVVDTAGIRRRGKVYEK---TEKYSVLRAMSAIERSDV 259
Query: 461 VALVIEAMACITEQ 474
V LV++A I EQ
Sbjct: 260 VLLVLDASTGIREQ 273
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 42/201 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS+L N+L+G +R IV +E G TRD + +F +VDT G+ +
Sbjct: 178 SMIGRPNVGKSSLVNKLLGEDRVIVANEEGTTRDAVDTPFTKDGIKFKVVDTAGI----R 233
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E T + +V R A +AIE S V++ ++D G+
Sbjct: 234 RRGKVYE---------------KTEKYSVLR--------AMSAIERSDVVLLVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP-LPIS 337
D+ +A + + + II+ VNK + P K SEF L ++P L +S
Sbjct: 271 REQDKHVAGYAHE--AGRGIIIVVNKWDLPEKNSTSAKEFEREIRSEFQYLDYAPILFVS 328
Query: 338 AISGTGTGELLDLVCSELKKV 358
A TG+ +D + S +K+V
Sbjct: 329 A----KTGQRIDQIPSMVKEV 345
>gi|375084641|ref|ZP_09731501.1| ribosome-associated GTPase EngA [Megamonas funiformis YIT 11815]
gi|374567888|gb|EHR39086.1| ribosome-associated GTPase EngA [Megamonas funiformis YIT 11815]
Length = 444
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 188/312 (60%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS FN++ +IV D PGVTRDR+Y + W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTFFNQIGKKRVSIVEDFPGVTRDRIYMDAEWLNHQFTMIDTGGIEL 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I+ + + +QA AIEE+ VI+F+VDG+
Sbjct: 64 ENDGEGKIL---------------------------ASMRQQARLAIEEADVIVFMVDGR 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T DEEI LR K +I+AVNK +SP++ + V EF++LG P+ ISA +
Sbjct: 97 TGMTHDDEEIGHILRNTR--KPVIVAVNKIDSPKQH-LDVYEFYNLGLGEPIGISAANAL 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD + + K + +D+ +E R IA++GRPNVGKSS++NAL+G++R IVS +
Sbjct: 154 NVGDLLDEIVANFPK-DLEDDIEHDEIR---IAVIGRPNVGKSSLVNALLGQERVIVSDV 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT+F F LIDTAG+R++ I E SV R+ RA+ R+DVV
Sbjct: 210 AGTTRDAIDTKFDDGNTH-FTLIDTAGMRRKGKIDMP---IERYSVMRSLRAVDRADVVL 265
Query: 463 LVIEAMACITEQ 474
+VI A +TEQ
Sbjct: 266 MVISAPEGVTEQ 277
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 38/201 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
EH R+A++GRPNVGKS+L N L+G R IV D G TRD + + G F L+DT
Sbjct: 175 EHDEIRIAVIGRPNVGKSSLVNALLGQERVIVSDVAGTTRDAIDTKFDDGNTHFTLIDTA 234
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ K I + +V R + A++ + V++ +
Sbjct: 235 GMRRKGK-------------------IDMPIERYSVMR--------SLRAVDRADVVLMV 267
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVS-----EFWSLGF 331
+ G+T D++IA + ++ K I+ VNK E K ++ + E L +
Sbjct: 268 ISAPEGVTEQDKKIAGYAHES--GKGCIIVVNKWDLIEKDDKTSLRFTEDIRDELGFLQY 325
Query: 332 SP-LPISAISGTGTGELLDLV 351
+P L SA++ ++DLV
Sbjct: 326 APVLYTSALTKQRVHRVVDLV 346
>gi|325280073|ref|YP_004252615.1| GTP-binding protein engA [Odoribacter splanchnicus DSM 20712]
gi|324311882|gb|ADY32435.1| GTP-binding protein engA [Odoribacter splanchnicus DSM 20712]
Length = 435
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/311 (42%), Positives = 183/311 (58%), Gaps = 43/311 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRLVG +AIV +E GVTRDR YG+S W +F ++DTGG VS
Sbjct: 5 VAIVGRPNVGKSTLFNRLVGTRKAIVNEESGVTRDRNYGKSSWNGKDFSVIDTGGY--VS 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
S E+ I +Q A++E+ VI+F+VD + G
Sbjct: 63 NSDDIFEEE---------------------------INKQVILALDEADVILFMVDAEIG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP--LPISAISGTG 343
+T D+ A LR +DK + L NK ++ + + + +F+ LG IS++SG+G
Sbjct: 96 VTDLDQNFARLLRN--IDKPVYLVANKVDNHER-LYEAQDFYRLGIKGDLFCISSVSGSG 152
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
TG+LLD V S + E+ +E+ + +P I IVGRPNVGKSS +NAL+GE+R IV+ I+
Sbjct: 153 TGDLLDQVVSHFQ-----ENTIEDTDHLPRITIVGRPNVGKSSTINALIGEERNIVTDIA 207
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRD ++T + G F L+DTAG+RK+A ++ E SV R+ RAI SDV L
Sbjct: 208 GTTRDTLNTRY-NRFGYDFLLVDTAGLRKKAKVSED---VEFYSVMRSIRAIEESDVCIL 263
Query: 464 VIEAMACITEQ 474
+I+A + Q
Sbjct: 264 LIDATRGMEAQ 274
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 29/150 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR+ IVGRPNVGKS+ N L+G R IV D G TRD + R ++F+LVDT G+
Sbjct: 175 LPRITIVGRPNVGKSSTINALIGEERNIVTDIAGTTRDTLNTRYNRFGYDFLLVDTAGL- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + ED+ + + ++ AIEES V I L+D
Sbjct: 234 ---RKKAKVSEDVEFYSVM-----------------------RSIRAIEESDVCILLIDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNK 312
G+ A D I + +N K +++ VNK
Sbjct: 268 TRGMEAQDLNIFHLIERN--RKGVVIVVNK 295
>gi|332799113|ref|YP_004460612.1| GTP-binding protein engA [Tepidanaerobacter acetatoxydans Re1]
gi|438002226|ref|YP_007271969.1| GTP-binding protein EngA [Tepidanaerobacter acetatoxydans Re1]
gi|332696848|gb|AEE91305.1| GTP-binding protein engA [Tepidanaerobacter acetatoxydans Re1]
gi|432179020|emb|CCP25993.1| GTP-binding protein EngA [Tepidanaerobacter acetatoxydans Re1]
Length = 439
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/310 (42%), Positives = 191/310 (61%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VG+PNVGKS LFNR++G +IV D+PGVTRDR+YG + W +F +VDTGGV
Sbjct: 5 VAVVGKPNVGKSTLFNRIIGKRISIVDDKPGVTRDRIYGEAEWNGKKFTMVDTGGV---- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+P A+++ +++M +RQA AIE + +I+F+VDG+ G
Sbjct: 61 --EP-------------------ASKDIILSQM----KRQADFAIETANLILFMVDGKEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT D ++A LR++ K ++L VNK ++ EF+ LGF P+ ISA+ G
Sbjct: 96 LTPTDLDVAQILRRS--GKPVLLVVNKVDNYTNTAYDY-EFYKLGFGDPIFISAVHGLAV 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD + +++ ++ E+ I +AI+G+PNVGKSS+LNA++GE+R IVS I G
Sbjct: 153 GDLLDKITDYIEE----PHILSEDEDIIKVAIIGKPNVGKSSLLNAILGEERVIVSDIPG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAID+ F G+K IDTAG+RK++ I+ E S RA AI R+DVV +V
Sbjct: 209 TTRDAIDSYFE-INGKKMLFIDTAGLRKKSRISED---VEYYSTVRALGAIDRADVVLMV 264
Query: 465 IEAMACITEQ 474
++A I+EQ
Sbjct: 265 LDASQNISEQ 274
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PNVGKS+L N ++G R IV D PG TRD + + + +DT G+
Sbjct: 177 KVAIIGKPNVGKSSLLNAILGEERVIVSDIPGTTRDAIDSYFEINGKKMLFIDTAGL--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + I ED+ +T+ +A AI+ + V++ ++D
Sbjct: 234 -RKKSRISEDVEYYSTV-----------------------RALGAIDRADVVLMVLDASQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSPL-P 335
++ D+ IA + K +I+ VNK + K EF + ++P+
Sbjct: 270 NISEQDKRIAGIAHE--AGKAVIIIVNKWDLIDKDSHTTDEFSKKIKNELAFMQYAPIVY 327
Query: 336 ISAISGTGTGELLDLV 351
+SA +G G +L+L+
Sbjct: 328 VSAKTGQRVGRILELI 343
>gi|163813998|ref|ZP_02205391.1| hypothetical protein COPEUT_00150 [Coprococcus eutactus ATCC 27759]
gi|158450692|gb|EDP27687.1| ribosome biogenesis GTPase Der [Coprococcus eutactus ATCC 27759]
Length = 445
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 182/312 (58%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W ++ F L+DTGG+
Sbjct: 9 PIVAIVGRPNVGKSTLFNVLAGEKISIVQDTPGVTRDRIYADINWLDYNFTLIDTGGI-- 66
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
NI+ + SM E QA AIE + VIIF+ D +
Sbjct: 67 -EPETDNII-------------------------LKSMRE-QAEIAIETADVIIFMTDVR 99
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ D ++AD LR++ K I+L VNK +S K + V EF++LG P PIS S
Sbjct: 100 QGMVDDDSKVADMLRRS--KKPIVLVVNKVDSFEKFMPDVYEFYNLGLGDPHPISGSSRL 157
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V S E ++ VE+E P IAI+G+PNVGKSSI+N L+GEDR IVS I
Sbjct: 158 GIGDMLDEVVSHFD--ESAKEEVEDER--PRIAIIGKPNVGKSSIINKLLGEDRVIVSDI 213
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDTE G+++ IDTAG+RK++ I E S+ R A+ R +V
Sbjct: 214 AGTTRDAIDTEVV-RNGREYVFIDTAGLRKKSKIKED---IERYSIIRTVSAVERCNVAV 269
Query: 463 LVIEAMACITEQ 474
LVI+A IT+Q
Sbjct: 270 LVIDATEGITDQ 281
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AI+G+PNVGKS++ N+L+G +R IV D G TRD + E++ +DT G+
Sbjct: 183 PRIAIIGKPNVGKSSIINKLLGEDRVIVSDIAGTTRDAIDTEVVRNGREYVFIDTAGLRK 242
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + +I E +I T+ +A+E V + ++D
Sbjct: 243 KSKIKEDI-ERYSIIRTV--------------------------SAVERCNVAVLVIDAT 275
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSP----L 334
G+T D +IA + K +I+AVNK ++ K + +F L + P L
Sbjct: 276 EGITDQDAKIAGIAHER--GKGMIIAVNKWDAIEKNDKTIYKFTEEIRNKLSYMPYAELL 333
Query: 335 PISAISGTGTGELLDLV 351
ISA +G +L + +
Sbjct: 334 FISAETGQRLPKLFETI 350
>gi|427392465|ref|ZP_18886470.1| GTPase Der [Alloiococcus otitis ATCC 51267]
gi|425731426|gb|EKU94244.1| GTPase Der [Alloiococcus otitis ATCC 51267]
Length = 437
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 131/312 (41%), Positives = 183/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS +FNR++G AIV DEPGVTRDR+Y + W +F ++DTGG
Sbjct: 4 PLVAIIGRPNVGKSTIFNRIIGDRLAIVQDEPGVTRDRIYADAEWLGKDFSVIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + +PL I+ QA AI+E+ VI+ + +
Sbjct: 61 -----------------ITFDDLPLHEE----------IKVQAEIAIDEADVIVMVTSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T D+++A L+++ +K ++LAVNK ++P ++ EF+ LG PLP+S G
Sbjct: 94 EGITDLDDQVALILQQS--NKPVVLAVNKTDNPELR-NEIYEFYGLGLGDPLPVSGSHGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + E + + I ++GRPNVGKSS++NA++GEDR IVS +
Sbjct: 151 GFGDLLDAVVANFP----NEANMAYDQDIIKFCLIGRPNVGKSSLVNAIIGEDRVIVSEL 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F +GQ + +IDTAGIR+R + TE SV RA RAI RSDVV
Sbjct: 207 EGTTRDAIDTPFMTQDGQDYVMIDTAGIRRRGKVYEK---TEKYSVMRAQRAIDRSDVVL 263
Query: 463 LVIEAMACITEQ 474
V++A I +Q
Sbjct: 264 CVLDAETGIRDQ 275
>gi|312794132|ref|YP_004027055.1| ribosome-associated gtpase enga [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|344995690|ref|YP_004798033.1| GTP-binding protein engA [Caldicellulosiruptor lactoaceticus 6A]
gi|312181272|gb|ADQ41442.1| ribosome-associated GTPase EngA [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|343963909|gb|AEM73056.1| GTP-binding protein engA [Caldicellulosiruptor lactoaceticus 6A]
Length = 440
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 190/312 (60%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL+G RAIV D PG+TRDR+ G + W F ++DTGG+
Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIIGETEWRGITFNVIDTGGIEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S ED+ + + RQA AI+ S VIIF+VDG+
Sbjct: 63 YS-------EDIIL----------------------KQMRRQAQFAIDMSDVIIFMVDGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A+ LR + K I+LAVNK ++ + M + EF+ LG S P+ +SA GT
Sbjct: 94 TGLTDADREVANMLRTS--KKPIVLAVNKIDNISQQAM-IYEFYELGLSDPIAMSAEHGT 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + K EG ++ EE+ I +AI+G+PN GKSS++N ++GE+R IVS I
Sbjct: 151 GVGDVLDAVVNYFDK-EGINEI--EESTI-KVAIIGKPNTGKSSLVNYILGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID+ F EG LIDTAG+R+++ I + E S+ R +AI RSD+
Sbjct: 207 PGTTRDAIDSTFEF-EGIPITLIDTAGLRRKSKIYDN---VERYSMLRTLQAIERSDICI 262
Query: 463 LVIEAMACITEQ 474
++++ ++EQ
Sbjct: 263 ILLDGTEDVSEQ 274
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 89/205 (43%), Gaps = 54/205 (26%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PN GKS+L N ++G R IV D PG TRD
Sbjct: 177 KVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRD------------------------ 212
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMI----ER----QATAAIEESCVI 276
AI +T EGIP+ + A R S I ER + AIE S +
Sbjct: 213 -----------AIDSTFEFEGIPITLIDTAGLRRKSKIYDNVERYSMLRTLQAIERSDIC 261
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-------- 328
I L+DG ++ D ++A + + K I+AVNK ++ K E+
Sbjct: 262 IILLDGTEDVSEQDAKVAGYAYE--AGKGCIVAVNKWDAVEKDEKTADEYKKQIEEKLSF 319
Query: 329 LGFSP-LPISAISGTGTGELLDLVC 352
L F+P L ISA +G +LL+ V
Sbjct: 320 LKFAPVLFISAKTGFRVKKLLETVL 344
>gi|260662130|ref|ZP_05863026.1| ribosome-associated GTPase EngA [Lactobacillus fermentum 28-3-CHN]
gi|260553513|gb|EEX26405.1| ribosome-associated GTPase EngA [Lactobacillus fermentum 28-3-CHN]
Length = 437
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/311 (42%), Positives = 190/311 (61%), Gaps = 42/311 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G AIV D PGVTRDR+Y W F ++DTGG
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGERIAIVEDTPGVTRDRLYAHGEWLGKNFSMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I M PL T+ I +QA AIEE+ VII +V+ +
Sbjct: 61 -----------------IEMSDQPLLTQ----------IRQQAEIAIEEADVIIMVVNVE 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K ++LAVNK ++P + + V +F+ LG P P+S++ G
Sbjct: 94 NGVTDADEQVAQILYRS--NKPVVLAVNKVDNPERR-LDVYDFYQLGLGEPYPVSSVHGV 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + + E E++RI + +GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GLGDMLDAVIENFAEEDAEE----EDDRI-RFSFIGRPNVGKSSLVNAILGENRVIVSDM 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAI+T+FT +G++F ++DTAGI+K+ + + TE ++ R+ RAI SDVV
Sbjct: 206 AGTTRDAINTQFTAKDGREFTMVDTAGIKKKGKLYEN---TERYALMRSMRAIDNSDVVL 262
Query: 463 LVIEAMACITE 473
+V+ A I E
Sbjct: 263 VVLNAEEGIRE 273
>gi|187935025|ref|YP_001885401.1| GTP-binding protein EngA [Clostridium botulinum B str. Eklund 17B]
gi|238691598|sp|B2THQ9.1|DER_CLOBB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|187723178|gb|ACD24399.1| ribosome-associated GTPase EngA [Clostridium botulinum B str.
Eklund 17B]
Length = 438
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 131/312 (41%), Positives = 186/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAEAEWLNYNFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P T + + + + RQA AIE + VI+F+VDG+
Sbjct: 62 ----EP--------------------TNDDIIMKQ---MRRQANIAIETADVIVFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD+E+A+ LRK+ K ++L VNK +S + EF++LG P+ ISA
Sbjct: 95 EGLTAADQEVANMLRKS--KKPVVLVVNKIDSLKYE-ENSWEFYNLGIGDPITISASQAL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + D EE+ IA++G+PNVGKSS++N L+GE+R IVS +
Sbjct: 152 GLGDMLDRVVEHFDRF----DADAEEDEYIRIAMIGKPNVGKSSLINKLLGEERLIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAID+ +G KF LIDTAG+R+++ + E SV R + +I ++DV
Sbjct: 208 AGTTRDAIDSYLETEQG-KFILIDTAGLRRKSKVKEE---IERYSVIRTYASIEKADVCI 263
Query: 463 LVIEAMACITEQ 474
L+I+A +TEQ
Sbjct: 264 LMIDAQDGVTEQ 275
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++G+PNVGKS+L N+L+G R IV D G TRD + + +F+L+DT G+
Sbjct: 178 RIAMIGKPNVGKSSLINKLLGEERLIVSDVAGTTRDAIDSYLETEQGKFILIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I I T A+IE++ V I ++D Q
Sbjct: 238 SKVKEEIERYSVIRTY---------------------------ASIEKADVCILMIDAQD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----LP 335
G+T DE+I + + ++K II+ VNK + K + +F SL F P L
Sbjct: 271 GVTEQDEKIIGYAHE--LNKAIIVLVNKWDLVEKDDKTMEKFKKDLQGSLKFMPYAEYLF 328
Query: 336 ISAISGTGTGELLDL 350
ISA++G T ++L+L
Sbjct: 329 ISALTGQRTHKILEL 343
>gi|340354819|ref|ZP_08677517.1| ribosome-associated GTPase EngA [Sporosarcina newyorkensis 2681]
gi|339623071|gb|EGQ27580.1| ribosome-associated GTPase EngA [Sporosarcina newyorkensis 2681]
Length = 439
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 143/312 (45%), Positives = 187/312 (59%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D GVTRDR+Y + W +EF L+DTGG+
Sbjct: 7 PTVAIVGRPNVGKSTIFNRIVGERISIVEDVSGVTRDRIYSPADWLNYEFNLIDTGGI-- 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E PL + I QA AI+E+ VIIFL +G+
Sbjct: 65 ----------------DIGDE--PLLEQ----------IRAQAEIAIDEADVIIFLTNGR 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L K K I+LAVNK ++P M + +F+SLGF P PIS G
Sbjct: 97 DGVTDADEQVARMLYKT--KKPIVLAVNKVDNPEMKEM-IYDFYSLGFGEPYPISGSHGL 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K+++ E E+ ++GRPNVGKSS++NAL+GEDR IVS I
Sbjct: 154 GLGDLLDAVAESFKEMDLEE----EDEDTIRFCLIGRPNVGKSSLVNALLGEDRVIVSDI 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTT DAID+ +GQ F++IDTAG+RK+ + + E SV RA +AI RSDVV
Sbjct: 210 AGTTTDAIDS-VKEVDGQLFKIIDTAGMRKKGKVYEN---MEKYSVLRALKAIDRSDVVL 265
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 266 IVLNAEEGIREQ 277
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R ++GRPNVGKS+L N L+G +R IV D G T D + F ++DT G+
Sbjct: 180 RFCLIGRPNVGKSSLVNALLGEDRVIVSDIAGTTTDAIDSVKEVDGQLFKIIDTAGMRKK 239
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N ME ++ +A AI+ S V++ +++ +
Sbjct: 240 GKVYEN-MEKYSVL--------------------------RALKAIDRSDVVLIVLNAEE 272
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K ++ VNK ++ K +++F
Sbjct: 273 GIREQDKRVAGYAEE--AGKGVLFVVNKWDTLEKDDKTMNKF 312
>gi|160331570|ref|XP_001712492.1| engA [Hemiselmis andersenii]
gi|159765940|gb|ABW98167.1| engA [Hemiselmis andersenii]
Length = 519
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 135/316 (42%), Positives = 180/316 (56%), Gaps = 41/316 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGG--NRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG 220
+P VAIVGR NVGKS L NR+ G + +IV D GVTRD+ Y ++FW EH+F++ DTGG
Sbjct: 77 IPIVAIVGRGNVGKSTLVNRISGAFEDGSIVHDLEGVTRDKNYRKAFWCEHQFLVTDTGG 136
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
A E + + ++ QA AIEE+ VIIF+V
Sbjct: 137 ---------------------------FAFEENNSNKFEADVKEQALKAIEEANVIIFVV 169
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DG+ L D E+A++L+ + ++LAVNK E+ +K + S+FWSLGF P+PISAI
Sbjct: 170 DGKCELDINDIELANYLK--FQKTPVLLAVNKSENLKKFDSEGSKFWSLGFGEPIPISAI 227
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
GT T LLD + L K+ E I +AI+G+PNVGKSSILN L + R IV
Sbjct: 228 HGTNTDVLLDKTITHLPKIS----FPFSETSI-KVAIIGKPNVGKSSILNFLTNKKRAIV 282
Query: 400 SPISGTTRDAIDTEFTGPEGQK-FRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
S I GTTRD+ D+ +G + LIDTAGIRK+ I E +NR F+AI++
Sbjct: 283 SDIPGTTRDSCDSFISGGSNSNIYNLIDTAGIRKKKMIEYG---PEFFMINRTFKAIQKC 339
Query: 459 DVVALVIEAMACITEQ 474
D V VI+A ITEQ
Sbjct: 340 DCVLFVIDASTGITEQ 355
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 364 LVEEENRIPAIAIVGRPNVGKSSILNALVG--EDRTIVSPISGTTRDAIDTEFTGPEGQK 421
L + RIP +AIVGR NVGKS+++N + G ED +IV + G TRD + E Q
Sbjct: 70 LKNQNRRIPIVAIVGRGNVGKSTLVNRISGAFEDGSIVHDLEGVTRDKNYRKAFWCEHQ- 128
Query: 422 FRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEA 467
F + DT G A ++ + EA +A +AI ++V+ V++
Sbjct: 129 FLVTDTGGF---AFEENNSNKFEADVKEQALKAIEEANVIIFVVDG 171
>gi|295091914|emb|CBK78021.1| ribosome-associated GTPase EngA [Clostridium cf. saccharolyticum
K10]
Length = 444
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 186/312 (59%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN L G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 6 PVVAVVGRPNVGKSTLFNVLAGEMISIVKDTPGVTRDRIYADCTWLDKAFTLIDTGGI-- 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ +R+ +A+M QA AI + VIIF+VD +
Sbjct: 64 ----EPD-------------------SRDIILAQM----REQAEIAIATADVIIFIVDVR 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +D ++AD LRK+ K +ILAVNK +S K V EF++LG P+PISA S
Sbjct: 97 QGLTDSDSKVADMLRKS--RKPVILAVNKVDSFAKFGNDVYEFYNLGIGDPIPISAASRL 154
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G GELLD V + + G E+ + P IAIVG+PNVGKSSI+N L+GE+R IVS I
Sbjct: 155 GLGELLDAVVAHFPEDTGEEEDDDR----PRIAIVGKPNVGKSSIVNKLLGENRVIVSNI 210
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DTE G ++ IDTAG+R++ I E S+ R A+ R+DVV
Sbjct: 211 AGTTRDAVDTEIV-HNGTEYVFIDTAGLRRKNKIKEE---LERYSIIRTVTAVERADVVL 266
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 267 VVIDATEGVTEQ 278
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVG+PNVGKS++ N+L+G NR IV + G TRD + E++ +DT G+
Sbjct: 180 PRIAIVGKPNVGKSSIVNKLLGENRVIVSNIAGTTRDAVDTEIVHNGTEYVFIDTAGL-- 237
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E+L + I + A+E + V++ ++D
Sbjct: 238 --RRKNKIKEELERYSII-----------------------RTVTAVERADVVLVVIDAT 272
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSPLP--- 335
G+T D +IA K II+ VNK ++ K + E+ + L F P
Sbjct: 273 EGVTEQDAKIAGIAHDR--GKGIIIVVNKWDAIEKNDKTIYEYTNKIKTILSFVPYAEYV 330
Query: 336 -ISAISGTGTGELLDLV 351
+SA +G +L DL+
Sbjct: 331 FVSAQTGQRLNKLYDLI 347
>gi|332982413|ref|YP_004463854.1| ribosome-associated GTPase EngA [Mahella australiensis 50-1 BON]
gi|332700091|gb|AEE97032.1| ribosome-associated GTPase EngA [Mahella australiensis 50-1 BON]
Length = 437
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 135/311 (43%), Positives = 191/311 (61%), Gaps = 44/311 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+GRPNVGKS LFNRLVG +IV D PG+TRDR+Y W F LVDTGG
Sbjct: 6 VAIIGRPNVGKSTLFNRLVGRRISIVDDTPGITRDRIYADVEWTGKIFSLVDTGG----- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
I + +++ V +M RQA AI+ + VI+ +VD G
Sbjct: 61 --------------------IDFSGKDSIVNQMI----RQAQYAIDTADVILLVVDANEG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSEFWSLGFS-PLPISAISGTG 343
+T+ADEE+AD LR++ +K ++L NK ++ RK ++ +F+ LG P+PISA +G G
Sbjct: 97 MTSADEEVADILRRS--NKSVLLVCNKVDNFNRKDLLY--DFYKLGLGDPIPISAGNGLG 152
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
G+LLD + + + + D+++EE IA++G+PN GKSSI+N L+G++R IVS
Sbjct: 153 IGDLLDKIVAHINV---SVDIIDEET--IRIAVIGKPNAGKSSIVNRLLGQERVIVSDQP 207
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRDAID EG ++ LIDTAG+R++A I + E SV+RA A++RSDV AL
Sbjct: 208 GTTRDAIDV-LIEHEGDRYILIDTAGLRRKAKINEA---VERYSVSRALEAVQRSDVAAL 263
Query: 464 VIEAMACITEQ 474
VI+A+ +TEQ
Sbjct: 264 VIDAVEGVTEQ 274
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
R+A++G+PN GKS++ NRL+G R IV D+PG TRD + EHE ++L+DT G+
Sbjct: 177 RIAVIGKPNAGKSSIVNRLLGQERVIVSDQPGTTRDAI---DVLIEHEGDRYILIDTAGL 233
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+K I A +V+R ++R AA+ ++D
Sbjct: 234 RRKAK-------------------INEAVERYSVSRALEAVQRSDVAAL--------VID 266
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP 333
G+T D +IA + + K +I+ +NK + K VS + +G++P
Sbjct: 267 AVEGVTEQDAKIAGFAHEK--GKGLIVLLNKWDLIEKDNKTVSRYKQDIAEKLGFIGYAP 324
Query: 334 -LPISAISGTGTGELLDLV 351
L ISA +G ++L +V
Sbjct: 325 VLFISAKTGQRMDKILPMV 343
>gi|28210831|ref|NP_781775.1| GTP-binding protein EngA [Clostridium tetani E88]
gi|37999662|sp|Q895X8.1|DER_CLOTE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|28203269|gb|AAO35712.1| GTP-binding protein [Clostridium tetani E88]
Length = 438
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 184/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y ++ W H F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVEDTPGVTRDRIYAQAEWLNHNFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + + VA+M RQA AIE + VI+F+VDG+
Sbjct: 62 ----EPE-------------------SEDIIVAQM----RRQAEMAIEMADVIMFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
GLT AD E+A LRK+ K I+L VNK + + + EF++LG P ISA
Sbjct: 95 EGLTPADNEVALMLRKS--KKPIVLVVNKIDRIEEE-DNMYEFYNLGIGEPTTISASQAL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD + K G +D EEE+ IA VG+PNVGKSS++N ++GE+R IVS I
Sbjct: 152 GLGDMLDKIVENFPK--GYQD--EEEDEYIRIAFVGKPNVGKSSLINKILGEERNIVSNI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID+ F + KF LIDTAG+R+R+ + E S R + AI R+DV
Sbjct: 208 PGTTRDAIDS-FLERDEDKFILIDTAGLRRRSKVKDQ---IERYSTVRTYAAIDRADVCI 263
Query: 463 LVIEAMACITEQ 474
L+I+A I+EQ
Sbjct: 264 LLIDAEEGISEQ 275
>gi|336437031|ref|ZP_08616740.1| GTP-binding protein engA [Lachnospiraceae bacterium 1_4_56FAA]
gi|336006165|gb|EGN36201.1| GTP-binding protein engA [Lachnospiraceae bacterium 1_4_56FAA]
Length = 442
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 187/312 (59%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + EF L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAGEMISIVKDTPGVTRDRIYADVSWLDREFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P +R+ +++M QA AI+ + VIIF+ D +
Sbjct: 62 ----EPE-------------------SRDIILSQM----REQAQIAIDTADVIIFITDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD ++ D LR++ K +IL VNK ++ K + V EF++LG P+PISA S
Sbjct: 95 QGLQDADSKVTDMLRRS--GKPVILTVNKVDNFDKFMPDVYEFYNLGIGDPVPISASSRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD VC+ + E+ E P IAIVG+PNVGKSSI+N LVGE+R IVS I
Sbjct: 153 GLGDMLDAVCAHFPEKTEEEEEDER----PRIAIVGKPNVGKSSIINKLVGENRVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT+ +G+++ IDTAG+R++ I E S+ R A+ R+DVV
Sbjct: 209 AGTTRDAIDTDVVH-DGKEYIFIDTAGLRRKNKIKEE---LERYSIIRTVTAVERADVVL 264
Query: 463 LVIEAMACITEQ 474
+VI+A+ +TEQ
Sbjct: 265 MVIDAVEGVTEQ 276
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVG+PNVGKS++ N+LVG NR IV D G TRD + E++ +DT G+
Sbjct: 178 PRIAIVGKPNVGKSSIINKLVGENRVIVSDIAGTTRDAIDTDVVHDGKEYIFIDTAGL-- 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E+L + I + A+E + V++ ++D
Sbjct: 236 --RRKNKIKEELERYSII-----------------------RTVTAVERADVVLMVIDAV 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP----L 334
G+T D +IA + K II+ VNK ++ K + E+ S L F P +
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGIIIVVNKWDAIEKNDKTMREYESKVRQILSFMPYAEIM 328
Query: 335 PISAISGTGTGELLDLV 351
+SA +G +L D++
Sbjct: 329 YVSAKTGQRLHKLYDMI 345
>gi|238019393|ref|ZP_04599819.1| hypothetical protein VEIDISOL_01257 [Veillonella dispar ATCC 17748]
gi|237864092|gb|EEP65382.1| hypothetical protein VEIDISOL_01257 [Veillonella dispar ATCC 17748]
Length = 444
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 191/312 (61%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W EF ++DTG
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTG---- 59
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
GI T + V +P M+ QA AIEE+ VI+F+VDG+
Sbjct: 60 ---------------------GIEFITDNSHV--IPKMMRLQAELAIEEADVILFVVDGK 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ ADEE+A+ LR + K ++L VNK +S + + EF++LG P+ ISA +
Sbjct: 97 QGIVPADEEVANILRAS--GKPVVLVVNKIDSVNQE-PNIYEFYNLGLGDPIGISAKNLM 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V GT V++E+ I +A++GRPNVGKSS+ NAL+G+DR IVS +
Sbjct: 154 NLGDLLDDTVKHFPPV-GTN--VDDEDTI-HVAVIGRPNVGKSSLTNALLGQDRVIVSDV 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+IDT +T + QKF LIDTAG+R+++ I + E S+ R+ R++ RSD+V
Sbjct: 210 AGTTRDSIDTYWTHGD-QKFVLIDTAGMRRKSKIEEA---VERYSIVRSLRSVDRSDIVV 265
Query: 463 LVIEAMACITEQ 474
LV++A +TEQ
Sbjct: 266 LVLDAQDGVTEQ 277
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 38/182 (20%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW--GEHEFM 214
NV + VA++GRPNVGKS+L N L+G +R IV D G TRD + ++W G+ +F+
Sbjct: 172 NVDDEDTIHVAVIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSI--DTYWTHGDQKFV 229
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ SK E AV R + ++ +++ S
Sbjct: 230 LIDTAGMRRKSKI------------------------EEAVERYSIV---RSLRSVDRSD 262
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE--FWSL 329
+++ ++D Q G+T D++IA + + K +I+ VNK E K ++ +E + L
Sbjct: 263 IVVLVLDAQDGVTEQDKKIAGYAYE--AGKGVIIVVNKWDLIEKDDKTTLRFTEDIYDEL 320
Query: 330 GF 331
GF
Sbjct: 321 GF 322
>gi|154498134|ref|ZP_02036512.1| hypothetical protein BACCAP_02115 [Bacteroides capillosus ATCC
29799]
gi|150273124|gb|EDN00281.1| ribosome biogenesis GTPase Der [Pseudoflavonifractor capillosus
ATCC 29799]
Length = 441
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 129/312 (41%), Positives = 186/312 (59%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRLVG +IV D PGVTRDR+Y W +F +VDTGG+
Sbjct: 3 PLVAIVGRPNVGKSMLFNRLVGQRLSIVEDTPGVTRDRIYAECEWRNRKFDIVDTGGI-- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+PN ++ S + QA AI + V +F+ D +
Sbjct: 61 ----EPNTDSEIL-----------------------SFMREQAEIAIRNADVTVFVCDIK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+GLTA+D+E+A+ L ++ K ++LAVNK + + EF++LG P+ +SA+ G
Sbjct: 94 SGLTASDQEVANMLLRS--GKPVVLAVNKMDQVGMTNPDIFEFYNLGLGDPIAVSAVHGH 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD ED VEE++ + +A++G+PNVGKSS++N ++GE+R IVS +
Sbjct: 152 GTGDLLDACFQYFP----PEDQVEEQDDVIKVAVIGKPNVGKSSLINRILGEERVIVSNM 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAID+ + +G K+ LIDTAG+RK++ + E SV RA AI R DV
Sbjct: 208 AGTTRDAIDSYYENDKG-KYILIDTAGMRKKSKVDDR---IEKFSVLRATMAIERCDVCL 263
Query: 463 LVIEAMACITEQ 474
++++A +TEQ
Sbjct: 264 IMVDAQEGVTEQ 275
>gi|440780870|ref|ZP_20959341.1| GTP-binding protein Der [Clostridium pasteurianum DSM 525]
gi|440221458|gb|ELP60663.1| GTP-binding protein Der [Clostridium pasteurianum DSM 525]
Length = 438
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 137/313 (43%), Positives = 185/313 (59%), Gaps = 43/313 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVEDTPGVTRDRIYAEAEWLNNLFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + + +A+M RQA AIE + VI+FLVDG+
Sbjct: 62 ----EPE-------------------SSDIILAQM----RRQAQMAIETADVIVFLVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A LRK+ K I+L VNK + EF++LG P+ ISA G
Sbjct: 95 QGLTDADNEVALMLRKS--KKPIVLVVNKIDKLADE-QNSFEFYNLGIGDPVTISASQGL 151
Query: 343 GTGELLDLVCSELKKVE-GTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G G++LD + K+++ G+ED + IA+VGRPNVGKSS++N L+GEDR IVS
Sbjct: 152 GLGDMLDKIVGNFKELDNGSED-----DEYIKIAVVGRPNVGKSSLINKLLGEDRVIVSD 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRDA+D+ EG KF LIDTAG+R+++ + E SV R AI R+DV
Sbjct: 207 IPGTTRDAVDSYLETEEG-KFVLIDTAGLRRKSKVKEE---IERYSVIRTLAAIERADVC 262
Query: 462 ALVIEAMACITEQ 474
L+++A +++Q
Sbjct: 263 ILILDATEQLSDQ 275
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 34/198 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A+VGRPNVGKS+L N+L+G +R IV D PG TRD + E +F+L+DT G+
Sbjct: 178 KIAVVGRPNVGKSSLINKLLGEDRVIVSDIPGTTRDAVDSYLETEEGKFVLIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I E ++ T+ AAIE + V I ++D
Sbjct: 238 SKVKEEI-ERYSVIRTL--------------------------AAIERADVCILILDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSPLPISAI 339
L+ DE+I + + ++K I++ VNK + K ++ F + L F P
Sbjct: 271 QLSDQDEKIIGYAHE--LNKAIMVIVNKWDLIEKDDKTMNVFKKNIQYKLSFMPYAQYMF 328
Query: 340 SGTGTGELLDLVCSELKK 357
TG+ ++ V E+KK
Sbjct: 329 ISAKTGQRVNKVLEEVKK 346
>gi|402303539|ref|ZP_10822632.1| ribosome-associated GTPase EngA [Selenomonas sp. FOBRC9]
gi|400378377|gb|EJP31234.1| ribosome-associated GTPase EngA [Selenomonas sp. FOBRC9]
Length = 441
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 186/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMPGVTRDRIYMDAEWLNHEFTIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + + M S QA A+EE+ VI+FLVDG+
Sbjct: 61 ----------------------IEFDESDHILRSMRS----QAELAMEEADVILFLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLTA+DEE+ LR+ +K +ILAVNK +S + + + +F++LG P+PISA +
Sbjct: 95 AGLTASDEEVGRLLRRT--NKPVILAVNKIDSFERESL-IYDFYALGLGDPIPISASNAM 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V + K E E E AIA+VGRPNVGKSS++N L+GE+R IVS +
Sbjct: 152 NLGDLLDAVVAAFPKEETEE----REPDEIAIAVVGRPNVGKSSLVNRLLGEERVIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT FT +G K+ LIDTAG+R++ I E SV R+ RAI R+ VV
Sbjct: 208 PGTTRDAIDTHFT-RDGAKYLLIDTAGMRRKGKITLP---VERYSVMRSLRAIDRAGVVL 263
Query: 463 LVIEAMACITEQ 474
+VI A I EQ
Sbjct: 264 MVINAAEGILEQ 275
>gi|320159766|ref|YP_004172990.1| GTP-binding protein EngA [Anaerolinea thermophila UNI-1]
gi|319993619|dbj|BAJ62390.1| GTP-binding protein EngA [Anaerolinea thermophila UNI-1]
Length = 455
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 149/320 (46%), Positives = 184/320 (57%), Gaps = 43/320 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS LFNRL G AIV D PG TRDR++ + W EF +VDTGG+
Sbjct: 6 VALVGRPNVGKSTLFNRLAGEPLAIVDDIPGTTRDRLFATAEWSGVEFDIVDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
P+ G E + + + A I QA AI+++ I+FLVD +G
Sbjct: 62 --DPS-------AARAGREPLSIGS-----AEFIKEIRSQAELAIQDADAILFLVDAISG 107
Query: 286 LTAADEEIADWLR--------KNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPI 336
LT AD E+A LR K Y F++ VNK +S + SEF+ LG P PI
Sbjct: 108 LTPADREVAQILRRKQQMVDGKPYPPVFLV--VNKADSANLRAV-ASEFYELGMGEPYPI 164
Query: 337 SAISGTGTGELLDLVCSELKKVE--GTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGE 394
SA+ GTGTG+LLD + + L KVE G +D V+ IAIVG+PN GKSS+LN LVGE
Sbjct: 165 SALHGTGTGDLLDDLIASLPKVEEAGEDDSVK-------IAIVGKPNAGKSSLLNRLVGE 217
Query: 395 DRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRA 454
+R IVSPI GTTRDA+DT G LIDTAGIR+R I E SV R+ RA
Sbjct: 218 ERAIVSPIPGTTRDAVDTRIEY-NGVPITLIDTAGIRRRGKIEPG---VEKYSVLRSLRA 273
Query: 455 IRRSDVVALVIEAMACITEQ 474
I RSDV L+I+A IT Q
Sbjct: 274 IERSDVALLMIDATTGITAQ 293
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 36/201 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVG+PN GKS+L NRLVG RAIV PG TRD + R + L+DT G+
Sbjct: 196 KIAIVGKPNAGKSSLLNRLVGEERAIVSPIPGTTRDAVDTRIEYNGVPITLIDTAGIRRR 255
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K +P + E ++ ++ AIE S V + ++D
Sbjct: 256 GKIEPGV-EKYSVLRSL--------------------------RAIERSDVALLMIDATT 288
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGF-SPLPISA 338
G+TA D IA ++ + + K ++ VNK ++ K ++E+ + L F +PI
Sbjct: 289 GITAQDTHIAGFILEAW--KSAVVLVNKWDAVEKDSHTMAEYTARLRHELNFMDYVPILF 346
Query: 339 ISGTGTGELLDLVCSELKKVE 359
IS TG+ +D V +V+
Sbjct: 347 ISAK-TGQRVDQVLPLALRVQ 366
>gi|347532222|ref|YP_004838985.1| GTP-binding protein Der [Roseburia hominis A2-183]
gi|345502370|gb|AEN97053.1| GTP-binding protein Der [Roseburia hominis A2-183]
Length = 441
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 186/312 (59%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN L G +IV D PGVTRDR+Y W ++ F ++DTGG+
Sbjct: 4 PVVAVVGRPNVGKSTLFNALAGERISIVKDTPGVTRDRIYADVNWLDYHFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ +R+ +++M QA AI + VIIFL D +
Sbjct: 62 ----EPD-------------------SRDVILSQM----REQAEIAIATADVIIFLTDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR++ K ++L VNK +S K + V EF++LG P PISA S
Sbjct: 95 QGLQDSDSKVADMLRRS--GKPVVLVVNKVDSFEKFMPDVYEFYNLGIGDPFPISAASML 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + +D EEE+ P +AI+G+PNVGKSS++N L EDR IVS I
Sbjct: 153 GLGDMLDEVVKHFP--DYAKD--EEEDERPKVAIIGKPNVGKSSLINKLAQEDRVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT+ T +G+++ IDTAG+R++ I E S+ RA A+ R+DV
Sbjct: 209 AGTTRDAIDTDIT-YDGKEYVFIDTAGLRRKNKIKEE---IERYSIIRAVTAVERADVCI 264
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 265 IVIDATEGVTEQ 276
>gi|348026191|ref|YP_004765996.1| GTP-binding protein engA [Megasphaera elsdenii DSM 20460]
gi|341822245|emb|CCC73169.1| GTP-binding protein engA [Megasphaera elsdenii DSM 20460]
Length = 443
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 184/312 (58%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVKKRISIVEDIPGVTRDRIYFDAEWLGQEFTMIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V D I T+ + QA AI E+ VI+++VDG+
Sbjct: 64 VDS-------DNHIFTS---------------------MRYQAELAIREADVILYVVDGK 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ DEEIA LR K +IL VNK +S + M + EF+SLG P+ +SA++
Sbjct: 96 VGVQPQDEEIAHILRS--CGKPVILVVNKIDSVEQE-MNIYEFYSLGLGDPIGVSAVNLM 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V +KKV +D ++ IA+VGRPNVGKSS+ NAL+G+DR IVS +
Sbjct: 153 NLGDLLDEVLKYIKKVPAIDD----DDEAIHIALVGRPNVGKSSLTNALLGQDRVIVSNV 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD+IDT ++ EG F LIDTAG+R++A I E SV RA RA+ RSD+
Sbjct: 209 PGTTRDSIDTHWS-YEGTDFVLIDTAGMRRKAKI---DLPVERYSVVRALRAVDRSDIAV 264
Query: 463 LVIEAMACITEQ 474
LVI+A +TEQ
Sbjct: 265 LVIDATEGVTEQ 276
>gi|255533659|ref|YP_003094031.1| small GTP-binding protein [Pedobacter heparinus DSM 2366]
gi|255346643|gb|ACU05969.1| small GTP-binding protein [Pedobacter heparinus DSM 2366]
Length = 433
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 185/312 (59%), Gaps = 47/312 (15%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS LFNRL +AIV D GVTRDR YG + W + +F ++DTGG + S
Sbjct: 5 IAIVGRPNVGKSTLFNRLTESRKAIVDDFSGVTRDRHYGVAEWTDKQFTVIDTGGYVANS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
ED+ EAA I Q AIEE+ V++F+VD G
Sbjct: 65 -------EDVF---------------EAA-------IREQVIIAIEEATVLLFMVDVTTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEFWSLGFSPL-PISAISGT 342
+T D+EIA LR++ FI+ VNK ++ + +Q + F+ G + PIS+++G+
Sbjct: 96 ITDLDDEIAQLLRRSKKPVFIV--VNKVDNTQ---LQNDAAVFYGFGLGEIHPISSMTGS 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD V ED+ EEEN +P I IVGRPNVGKSS++NAL+G++R IV+PI
Sbjct: 151 GTGDLLDEVIKHF------EDVPEEENALPKITIVGRPNVGKSSLINALMGKERNIVTPI 204
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+I + G +F IDTAG+RK+ + + E SV R +A+ +DVV
Sbjct: 205 AGTTRDSIHIHY-NQFGHEFMFIDTAGLRKKTKVKEN---IEFYSVMRTIKALEEADVVI 260
Query: 463 LVIEAMACITEQ 474
L+I+AM + Q
Sbjct: 261 LMIDAMEGLESQ 272
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 91/202 (45%), Gaps = 35/202 (17%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E+ LP++ IVGRPNVGKS+L N L+G R IV G TRD ++ HEFM +DT
Sbjct: 170 ENALPKITIVGRPNVGKSSLINALMGKERNIVTPIAGTTRDSIHIHYNQFGHEFMFIDTA 229
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ +K + NI E ++ TI A+EE+ V+I +
Sbjct: 230 GLRKKTKVKENI-EFYSVMRTI--------------------------KALEEADVVILM 262
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------LGFSP 333
+D GL + D I KN K I++ VNK + K V+ F F+
Sbjct: 263 IDAMEGLESQDVNIFHLAEKN--KKGIVILVNKWDLVEKNSKTVNIFEDQIRQKLQPFTD 320
Query: 334 LPISAISGTGTGELLDLVCSEL 355
+PI IS + V + L
Sbjct: 321 IPIIFISALNKQRIFQAVETAL 342
>gi|424834977|ref|ZP_18259649.1| GTP-binding protein Der [Clostridium sporogenes PA 3679]
gi|365978337|gb|EHN14428.1| GTP-binding protein Der [Clostridium sporogenes PA 3679]
Length = 439
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 139/314 (44%), Positives = 186/314 (59%), Gaps = 45/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ I S + RQA AIE + VIIFLVDG+
Sbjct: 62 ----EPE-SEDIII----------------------SQMRRQAQIAIEMANVIIFLVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL ADEE+A LRK+ K ++L VNK + K EF++LG P+ IS+
Sbjct: 95 EGLAPADEEVAQMLRKS--KKPVVLVVNKIDK-LKDEDNAYEFYNLGIGDPITISSSQAL 151
Query: 343 GTGELLDLVCSELK--KVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G++LD V K K +G EE+ RI IA VG+PNVGKSS++N L+GE+R IVS
Sbjct: 152 GLGDMLDRVVEHFKDDKSDG-----EEDERI-NIAFVGKPNVGKSSLINKLLGEERLIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRD+ID+ + + +F LIDTAG+R+++ + E SV R + +I R+DV
Sbjct: 206 NIPGTTRDSIDS-YVNTDFGEFTLIDTAGLRRKSKVKEE---IERYSVIRTYASIERADV 261
Query: 461 VALVIEAMACITEQ 474
L+I+A I+EQ
Sbjct: 262 CILMIDATEGISEQ 275
>gi|313893405|ref|ZP_07826977.1| ribosome biogenesis GTPase Der [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442046|gb|EFR60466.1| ribosome biogenesis GTPase Der [Veillonella sp. oral taxon 158 str.
F0412]
Length = 444
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 190/312 (60%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W EF ++DTG
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTG---- 59
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
GI T + V +P M+ QA AIEE+ VI+F+VDG+
Sbjct: 60 ---------------------GIEFITENSHV--IPKMMRLQAELAIEEADVILFVVDGK 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ ADEE+ + LR + K ++L VNK +S + + EF++LG P+ ISA +
Sbjct: 97 QGIVPADEEVGNILRAS--GKPVVLVVNKIDSVNQE-PNIYEFYNLGLGDPIGISAKNLM 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V GT V++E+ I +AI+GRPNVGKSS+ NAL+G+DR IVS +
Sbjct: 154 NLGDLLDDTVKHFPPV-GTN--VDDEDTI-HVAIIGRPNVGKSSLTNALLGQDRVIVSDV 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+IDT +T + QKF LIDTAG+R+++ I + E S+ R+ R++ RSD+V
Sbjct: 210 AGTTRDSIDTYWTHGD-QKFVLIDTAGMRRKSKIDEA---VERYSIVRSLRSVDRSDIVV 265
Query: 463 LVIEAMACITEQ 474
LV++A +TEQ
Sbjct: 266 LVLDAQDGVTEQ 277
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 38/182 (20%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW--GEHEFM 214
NV + VAI+GRPNVGKS+L N L+G +R IV D G TRD + ++W G+ +F+
Sbjct: 172 NVDDEDTIHVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSI--DTYWTHGDQKFV 229
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ SK I A ++ R + +++ S
Sbjct: 230 LIDTAGMRRKSK-------------------IDEAVERYSIVR--------SLRSVDRSD 262
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE--FWSL 329
+++ ++D Q G+T D++IA + + K +++ VNK E K ++ +E + L
Sbjct: 263 IVVLVLDAQDGVTEQDKKIAGYAYE--AGKGVVIVVNKWDLVEKDDKTTLRFTEDIYEEL 320
Query: 330 GF 331
GF
Sbjct: 321 GF 322
>gi|365873837|ref|ZP_09413370.1| ribosome-associated GTPase EngA [Thermanaerovibrio velox DSM 12556]
gi|363983924|gb|EHM10131.1| ribosome-associated GTPase EngA [Thermanaerovibrio velox DSM 12556]
Length = 440
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 186/311 (59%), Gaps = 43/311 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS+LFNRLVG AIV D PGVTRDR+Y + W F LVDTGG +
Sbjct: 4 VAIVGRPNVGKSSLFNRLVGKKLAIVEDIPGVTRDRLYAETEWDGKRFYLVDTGG---IE 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ P+ +D I RQ A++E V+IFL+DG+ G
Sbjct: 61 PASPHPFQD--------------------------AIRRQVEIALKECDVVIFLLDGKEG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL--PISAISGTG 343
+TA DE IA+ LR++ K +++A+NK ++P++ V + +SLGF PL IS G
Sbjct: 95 VTAGDEAIAEMLRRS--SKPVVVAMNKIDNPKRED-NVLDAYSLGF-PLVMGISVEHGIN 150
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
G+LLD V S L E ED +E I +IVGRPNVGKSS+ N L+GE+R +VSPI
Sbjct: 151 MGDLLDAVASSLPDDEPVED---DEGAI-RFSIVGRPNVGKSSLFNRLIGEERAVVSPIP 206
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRD +D +F + KFR++DTAG+R+++ + S E SV R +AI RS V L
Sbjct: 207 GTTRDTVDVDFQWNQ-LKFRIMDTAGLRRKSRVDDS---LEYYSVVRTLKAIDRSHVALL 262
Query: 464 VIEAMACITEQ 474
+++A +TEQ
Sbjct: 263 LMDASEMLTEQ 273
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 38/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +IVGRPNVGKS+LFNRL+G RA+V PG TRD + W + +F ++DT G+
Sbjct: 176 RFSIVGRPNVGKSSLFNRLIGEERAVVSPIPGTTRDTVDVDFQWNQLKFRIMDTAGLRRK 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
S+ + +E ++ T+ AI+ S V + L+D
Sbjct: 236 SRVDDS-LEYYSVVRTL--------------------------KAIDRSHVALLLMDASE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE--SPRKGIMQ------VSEFWSLGFSPLP- 335
LT D+ + L K +++ VNK + +P + + E +L ++P+
Sbjct: 269 MLTEQDKRLM--LHVEERGKGLVIGVNKWDLLTPSEDLGDRIRDRIRDELPTLSYAPMVF 326
Query: 336 ISAISGTGTGELLDLVC 352
+SA +G G ++ +L+
Sbjct: 327 LSAKTGRGIQKVPELIA 343
>gi|312622952|ref|YP_004024565.1| ribosome-associated GTPase enga [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203419|gb|ADQ46746.1| ribosome-associated GTPase EngA [Caldicellulosiruptor
kronotskyensis 2002]
Length = 440
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 188/312 (60%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL+G RAIV D PG+TRDR+ G + W F ++DTGG+
Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIIGETEWRGITFNVIDTGGIEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S ED+ + + RQA AI+ S VIIF+VDG+
Sbjct: 63 YS-------EDIIL----------------------KQMRRQAQFAIDMSDVIIFMVDGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A+ LR + K I+LAVNK ++ + M + EF+ LG S P+ +SA G
Sbjct: 94 TGLTDADREVANMLRAS--KKPIVLAVNKIDNISQQAM-IYEFYELGLSDPIAMSAEHGA 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + K EG ++ EE I +AI+G+PN GKSS++N ++GE+R IVS I
Sbjct: 151 GVGDVLDAVVNYFNK-EGINEI--EEGTIK-VAIIGKPNTGKSSLVNYILGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID+ F EG LIDTAG+R+++ I + E S+ R +AI RSD+
Sbjct: 207 PGTTRDAIDSTFEF-EGIPITLIDTAGLRRKSKIYDN---VERYSMLRTLQAIERSDICI 262
Query: 463 LVIEAMACITEQ 474
++++ ++EQ
Sbjct: 263 ILLDGTENVSEQ 274
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 89/205 (43%), Gaps = 54/205 (26%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PN GKS+L N ++G R IV D PG TRD
Sbjct: 177 KVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRD------------------------ 212
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMI----ER----QATAAIEESCVI 276
AI +T EGIP+ + A R S I ER + AIE S +
Sbjct: 213 -----------AIDSTFEFEGIPITLIDTAGLRRKSKIYDNVERYSMLRTLQAIERSDIC 261
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-------- 328
I L+DG ++ D ++A + + K I+AVNK ++ K EF
Sbjct: 262 IILLDGTENVSEQDAKVAGYAYE--AGKGCIVAVNKWDAVEKDEKTADEFKKQIEEKLSF 319
Query: 329 LGFSP-LPISAISGTGTGELLDLVC 352
L F+P L ISA +G +LL+ V
Sbjct: 320 LKFAPVLFISAKTGFRVKKLLETVL 344
>gi|365134322|ref|ZP_09343201.1| ribosome-associated GTPase EngA [Subdoligranulum sp. 4_3_54A2FAA]
gi|363614283|gb|EHL65780.1| ribosome-associated GTPase EngA [Subdoligranulum sp. 4_3_54A2FAA]
Length = 441
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 131/312 (41%), Positives = 188/312 (60%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+LVG AIV D PGVTRDR+YG W +H F+L+DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLVGQRLAIVEDTPGVTRDRLYGNCEWQDHRFLLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P +D+ + G QA AI+ + I+F+ D +
Sbjct: 62 ----EPK-ADDVLLRHMRG----------------------QAQLAIDTADAILFVTDIR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
+G+TA D++IA L ++ K + L VNK + + M++ +F+SLG L P+S++ G
Sbjct: 95 SGVTAQDQDIAAMLMRS--GKPVFLVVNKVDGVGEPPMELYDFYSLGIGELYPVSSVHGH 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LL+ VC+ L G ED +E+ RI +A++GRPNVGKSS++N ++GE+R IV+
Sbjct: 153 GTGDLLEAVCACLP---GNEDGEDEDERI-GVAVIGRPNVGKSSLVNHILGEERMIVANE 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+D++ G KF IDTAG+RKR + E SV R+ A+ R+ V
Sbjct: 209 AGTTRDAVDSDVDNQYG-KFTFIDTAGLRKRGKVEDG---VERYSVLRSLAAVERAKVCV 264
Query: 463 LVIEAMACITEQ 474
++I+A TEQ
Sbjct: 265 IMIDATEGFTEQ 276
>gi|187778884|ref|ZP_02995357.1| hypothetical protein CLOSPO_02479 [Clostridium sporogenes ATCC
15579]
gi|187772509|gb|EDU36311.1| ribosome biogenesis GTPase Der [Clostridium sporogenes ATCC 15579]
Length = 439
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 139/314 (44%), Positives = 186/314 (59%), Gaps = 45/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ I S + RQA AIE + VIIFLVDG+
Sbjct: 62 ----EPE-SEDIII----------------------SQMRRQAQIAIEMANVIIFLVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL ADEE+A LRK+ K ++L VNK + K EF++LG P+ IS+
Sbjct: 95 EGLAPADEEVAQMLRKS--KKPVVLVVNKIDK-LKDEDNAYEFYNLGIGDPVTISSSQAL 151
Query: 343 GTGELLDLVCSELK--KVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G++LD V K K +G EE+ RI IA VG+PNVGKSS++N L+GE+R IVS
Sbjct: 152 GLGDMLDRVVEHFKDDKSDG-----EEDERI-NIAFVGKPNVGKSSLINKLLGEERLIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRD+ID+ + + +F LIDTAG+R+++ + E SV R + +I R+DV
Sbjct: 206 NIPGTTRDSIDS-YVNTDFGEFTLIDTAGLRRKSKVKEE---IERYSVIRTYASIERADV 261
Query: 461 VALVIEAMACITEQ 474
L+I+A I+EQ
Sbjct: 262 CILMIDATEGISEQ 275
>gi|188587902|ref|YP_001920548.1| GTP-binding protein EngA [Clostridium botulinum E3 str. Alaska E43]
gi|238689667|sp|B2V3Z1.1|DER_CLOBA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|188498183|gb|ACD51319.1| ribosome-associated GTPase EngA [Clostridium botulinum E3 str.
Alaska E43]
Length = 438
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 130/312 (41%), Positives = 186/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAEAEWLNYNFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P T + + + + RQA AIE + VI+F+VDG+
Sbjct: 62 ----EP--------------------TNDDIIMKQ---MRRQANIAIETADVIVFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD+E+A+ LRK+ K ++L VNK +S + EF++LG P+ ISA
Sbjct: 95 EGLTAADQEVANMLRKS--KKPVVLVVNKIDSLKYE-ENSWEFYNLGIGDPITISASQAL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + D E++ IA++G+PNVGKSS++N L+GE+R IVS +
Sbjct: 152 GLGDMLDKVVEHFDRF----DADAEDDEYIRIAMIGKPNVGKSSLINKLLGEERLIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAID+ +G KF LIDTAG+R+++ + E SV R + +I ++DV
Sbjct: 208 AGTTRDAIDSYLETEQG-KFILIDTAGLRRKSKVKEE---IERYSVIRTYASIEKADVCI 263
Query: 463 LVIEAMACITEQ 474
L+I+A +TEQ
Sbjct: 264 LMIDAQDGVTEQ 275
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++G+PNVGKS+L N+L+G R IV D G TRD + + +F+L+DT G+
Sbjct: 178 RIAMIGKPNVGKSSLINKLLGEERLIVSDVAGTTRDAIDSYLETEQGKFILIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I I T A+IE++ V I ++D Q
Sbjct: 238 SKVKEEIERYSVIRTY---------------------------ASIEKADVCILMIDAQD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----LP 335
G+T DE+I + + ++K I++ VNK + K + +F SL F P L
Sbjct: 271 GVTEQDEKIIGYAHE--LNKAIMVLVNKWDLVEKDDKTMEKFKKDLQGSLKFMPYAEYLF 328
Query: 336 ISAISGTGTGELLDL 350
ISA++G T ++L+L
Sbjct: 329 ISALTGQRTHKILEL 343
>gi|401565470|ref|ZP_10806308.1| ribosome-associated GTPase EngA [Selenomonas sp. FOBRC6]
gi|400187219|gb|EJO21415.1| ribosome-associated GTPase EngA [Selenomonas sp. FOBRC6]
Length = 441
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 186/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMPGVTRDRIYMDAEWLNHEFTIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + + M S QA A+EE+ VI+FLVDG+
Sbjct: 61 ----------------------IEFDESDHILRSMRS----QAELAMEEADVILFLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT++DEE+A LR+ K +ILAVNK +S + + + +F++LG P+PISA +
Sbjct: 95 AGLTSSDEEVARLLRRT--KKPVILAVNKIDSFDRESL-IYDFYALGLGDPIPISASNAM 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD + + E D E + AIA+VGRPNVGKSS++N L+GE+R IVS +
Sbjct: 152 NLGDLLDAIVAAFP--EEMSDGTESDE--IAIAVVGRPNVGKSSLVNRLLGEERVIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT FT +G K+ LIDTAG+R++ I E SV R+ RAI R+ VV
Sbjct: 208 PGTTRDAIDTHFT-RDGAKYLLIDTAGMRRKGKITLP---VERYSVMRSLRAIDRAGVVL 263
Query: 463 LVIEAMACITEQ 474
+VI A I EQ
Sbjct: 264 MVINAAEGILEQ 275
>gi|251778692|ref|ZP_04821612.1| ribosome-associated GTPase EngA [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243083007|gb|EES48897.1| ribosome-associated GTPase EngA [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 438
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 130/312 (41%), Positives = 186/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAEAEWLNYNFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P T + + + + RQA AIE + VI+F+VDG+
Sbjct: 62 ----EP--------------------TNDDIIMKQ---MRRQANIAIETADVIVFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD+E+A+ LRK+ K ++L VNK +S + EF++LG P+ ISA
Sbjct: 95 EGLTAADQEVANMLRKS--KKPVVLVVNKIDSLKYE-ENSWEFYNLGIGDPITISASQAL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + D E++ IA++G+PNVGKSS++N L+GE+R IVS +
Sbjct: 152 GLGDMLDRVVEHFDRF----DADAEDDEYIRIAMIGKPNVGKSSLINKLLGEERLIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAID+ +G KF LIDTAG+R+++ + E SV R + +I ++DV
Sbjct: 208 AGTTRDAIDSYLETEQG-KFILIDTAGLRRKSKVKEE---IERYSVIRTYASIEKADVCI 263
Query: 463 LVIEAMACITEQ 474
L+I+A +TEQ
Sbjct: 264 LMIDAQDGVTEQ 275
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++G+PNVGKS+L N+L+G R IV D G TRD + + +F+L+DT G+
Sbjct: 178 RIAMIGKPNVGKSSLINKLLGEERLIVSDVAGTTRDAIDSYLETEQGKFILIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I I T A+IE++ V I ++D Q
Sbjct: 238 SKVKEEIERYSVIRTY---------------------------ASIEKADVCILMIDAQD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----LP 335
G+T DE+I + + ++K I++ VNK + K + +F SL F P L
Sbjct: 271 GVTEQDEKIIGYAHE--LNKAIMVLVNKWDLVEKDDKTMEKFKKDLQGSLKFMPYAEYLF 328
Query: 336 ISAISGTGTGELLDL 350
ISA++G T ++L+L
Sbjct: 329 ISALTGQRTHKILEL 343
>gi|406980534|gb|EKE02122.1| hypothetical protein ACD_20C00425G0019 [uncultured bacterium]
Length = 444
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 132/314 (42%), Positives = 188/314 (59%), Gaps = 45/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS NRL+G +IV D PGVTRDR+Y W +F ++DTGG++
Sbjct: 5 PIVAIVGRPNVGKSTFVNRLLGSRESIVDDMPGVTRDRLYFNVEWAGKDFTVIDTGGIV- 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
P + +++ ++ I Q A EE+ VIIF+VDG+
Sbjct: 64 -----PGVEDEIMMS-----------------------IYTQVEIATEEADVIIFMVDGK 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL D ++A+ LRK+ +K I L VNK + P K + +++F++LG P P+S++ GT
Sbjct: 96 EGLNPVDIDVANLLRKS--EKPIFLTVNKIDVPEKTSL-IADFYALGIGDPYPVSSMHGT 152
Query: 343 -GTGELLDLVCSELKKVEGTEDLVEEENRIPA-IAIVGRPNVGKSSILNALVGEDRTIVS 400
G G+LLD + V+ D V +E P +AIVGRPN GKSS++N+L+GE+R IVS
Sbjct: 153 GGVGDLLDDI------VKAIPDFVSDEETKPVHLAIVGRPNAGKSSLVNSLLGEERVIVS 206
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
++GTTRDAI+T +G + L+DTAGIR++A + E SV R+ +AIR SDV
Sbjct: 207 EVAGTTRDAINTNLC-VDGNCYTLVDTAGIRRKARVEYG---IEKFSVARSIKAIRESDV 262
Query: 461 VALVIEAMACITEQ 474
L+I+A IT+Q
Sbjct: 263 TLLIIDATEGITDQ 276
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 33/154 (21%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P HL AIVGRPN GKS+L N L+G R IV + G TRD + + + LVDT
Sbjct: 177 PVHL----AIVGRPNAGKSSLVNSLLGEERVIVSEVAGTTRDAINTNLCVDGNCYTLVDT 232
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ ++ + G+E +A ++ AI ES V +
Sbjct: 233 AGIRRKARVE------------YGIEKFSVA---------------RSIKAIRESDVTLL 265
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
++D G+T D++I + N + I++ VNK
Sbjct: 266 IIDATEGITDQDKKIGEI--SNDAGRGIVIVVNK 297
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI--DTEFTGPEGQKFRLIDT 427
R P +AIVGRPNVGKS+ +N L+G +IV + G TRD + + E+ G+ F +IDT
Sbjct: 3 RKPIVAIVGRPNVGKSTFVNRLLGSRESIVDDMPGVTRDRLYFNVEWA---GKDFTVIDT 59
Query: 428 AGI 430
GI
Sbjct: 60 GGI 62
>gi|373954476|ref|ZP_09614436.1| GTP-binding protein engA [Mucilaginibacter paludis DSM 18603]
gi|373891076|gb|EHQ26973.1| GTP-binding protein engA [Mucilaginibacter paludis DSM 18603]
Length = 433
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 135/310 (43%), Positives = 179/310 (57%), Gaps = 43/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL+ +AIV D GVTRDR YG S W H+F ++DTGG + S
Sbjct: 5 VAIVGRPNVGKSTLFNRLIEARKAIVDDFSGVTRDRHYGVSEWTGHDFTVIDTGGYVANS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EAA I Q AIEE+ VI+F+VD G
Sbjct: 65 DD----------------------VFEAA-------IREQVIIAIEEASVILFMVDVTTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T D+EIA +LRK+ F++ NK ++ + + + + F+ G + ISA++G+GT
Sbjct: 96 ITDLDDEIATFLRKSKKPVFVV--SNKVDNNSQQV-ESATFYGFGLGDIYNISAMTGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GELLD V V+ ED+ E+N +P I GRPNVGKSSI+N L+G DR IV+PI+G
Sbjct: 153 GELLDEV------VKTFEDVPLEQNTLPKYTIAGRPNVGKSSIINTLLGHDRNIVTPIAG 206
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+I + G F LIDTAG+RK+ + + E SV R +AI SDVV L+
Sbjct: 207 TTRDSIHIHY-NQFGHDFMLIDTAGMRKKTKVKEN---IEFYSVMRTIKAIEESDVVILM 262
Query: 465 IEAMACITEQ 474
I+A+ I Q
Sbjct: 263 IDAVEGIEAQ 272
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 80/163 (49%), Gaps = 31/163 (19%)
Query: 154 TIGNVP--EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH 211
T +VP ++ LP+ I GRPNVGKS++ N L+G +R IV G TRD ++ H
Sbjct: 162 TFEDVPLEQNTLPKYTIAGRPNVGKSSIINTLLGHDRNIVTPIAGTTRDSIHIHYNQFGH 221
Query: 212 EFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIE 271
+FML+DT G+ +K + NI E ++ TI AIE
Sbjct: 222 DFMLIDTAGMRKKTKVKENI-EFYSVMRTI--------------------------KAIE 254
Query: 272 ESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
ES V+I ++D G+ A D I KN K I++ VNK +
Sbjct: 255 ESDVVILMIDAVEGIEAQDVNIFHLAEKN--KKGIVIVVNKWD 295
>gi|288930105|ref|ZP_06423943.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 317 str.
F0108]
gi|288328578|gb|EFC67171.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 317 str.
F0108]
Length = 437
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 139/311 (44%), Positives = 180/311 (57%), Gaps = 43/311 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V+N
Sbjct: 5 VAIVGRPNVGKSTLFNRLTKTRSAIVSDTAGTTRDRQYGKCDWAGREFSVVDTGGWVVN- 63
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+I ED I RQ A EE+ +++FLVD
Sbjct: 64 ---SDDIFED--------------------------AIRRQVLVATEEADLVLFLVDVNT 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
G+T DE++A LR+ + ++L VNK ++ + I + F+SLG P PISA +G+G
Sbjct: 95 GVTDLDEDVAQILRRTKVP--VVLVVNKADNNEQ-IYEAPAFYSLGLGDPFPISAATGSG 151
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
TG+LLD V ++LK E E++ E+ IP A+VGRPN GKSSI+NA +GEDR IV+ I+
Sbjct: 152 TGDLLDAVIAQLKPGEN-ENV---EDGIPRFAVVGRPNAGKSSIVNAFIGEDRNIVTEIA 207
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRD+I T F G F L+DTAGIR++ + E SV R+ RAI SDV L
Sbjct: 208 GTTRDSIYTRF-DKFGFDFYLVDTAGIRRKNKVTED---LEFYSVMRSIRAIEHSDVCIL 263
Query: 464 VIEAMACITEQ 474
+I+A I Q
Sbjct: 264 MIDATRGIESQ 274
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 29/153 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT
Sbjct: 172 EDGIPRFAVVGRPNAGKSSIVNAFIGEDRNIVTEIAGTTRDSIYTRFDKFGFDFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIE S V I +
Sbjct: 232 GI----RRKNKVTEDLEFYSVM-----------------------RSIRAIEHSDVCILM 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
+D G+ + D I ++KN K +++ VNK
Sbjct: 265 IDATRGIESQDMNIFQLIQKN--QKSLVVVVNK 295
>gi|320529134|ref|ZP_08030226.1| ribosome-associated GTPase EngA [Selenomonas artemidis F0399]
gi|320138764|gb|EFW30654.1| ribosome-associated GTPase EngA [Selenomonas artemidis F0399]
Length = 441
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 187/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMPGVTRDRIYMDAEWLNHEFTIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + + M S QA A+EE+ VI+FLVDG+
Sbjct: 61 ----------------------IEFDESDHILRSMRS----QAELAMEEADVILFLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLTA+DEE+ LR+ +K +ILAVNK +S + + + +F++LG P+PISA +
Sbjct: 95 AGLTASDEEVGRLLRRT--NKPVILAVNKIDSFERESL-IYDFYALGLGDPIPISASNAM 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V + + E+ E E AIA+VGRPNVGKSS++N L+GE+R IVS +
Sbjct: 152 NLGDLLDAVVAAFR----AEETEEREPDEIAIAVVGRPNVGKSSLVNRLLGEERVIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT FT +G K+ LIDTAG+R++ I E SV R+ RAI R+ VV
Sbjct: 208 PGTTRDAIDTHFT-RDGAKYLLIDTAGMRRKGKITLP---VERYSVMRSLRAIDRAGVVL 263
Query: 463 LVIEAMACITEQ 474
+VI A I EQ
Sbjct: 264 MVINAAEGILEQ 275
>gi|372221087|ref|ZP_09499508.1| GTP-binding protein Der [Mesoflavibacter zeaxanthinifaciens S86]
Length = 433
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/303 (44%), Positives = 181/303 (59%), Gaps = 43/303 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W EF L+DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRREAIVDAVSGVTRDRHYGKSDWNGKEFSLIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
IG E I I++Q AI+E+ IIF+VD ++G
Sbjct: 62 ---------------IGSEDI-----------FEQEIDKQVELAIDEADAIIFMVDVESG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T DE++A+ LRK +DK + LAVNK ++ ++ V EF++LG IS+I+G+G+
Sbjct: 96 VTGMDEDVANLLRK--VDKPVFLAVNKVDNAQREADAV-EFYALGLGEYFTISSINGSGS 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GELLD + L + E ED +P A+VGRPN GKSS +NAL+GEDR IV+ I+G
Sbjct: 153 GELLDALVEVLPETEEIED------ELPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAG 206
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+IDT++ G +F L+DTAGIR++A + E SV R+ RAI DV L+
Sbjct: 207 TTRDSIDTKYN-RFGFEFNLVDTAGIRRKAKVKED---LEFYSVMRSVRAIEHCDVCILM 262
Query: 465 IEA 467
++A
Sbjct: 263 LDA 265
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E LPR A+VGRPN GKS+ N L+G +R IV D G TRD + + EF LVDT
Sbjct: 170 EDELPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDSIDTKYNRFGFEFNLVDTA 229
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIE V I +
Sbjct: 230 GI----RRKAKVKEDLEFYSVM-----------------------RSVRAIEHCDVCILM 262
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+D G + I WL + +K I++ VNK + K V ++
Sbjct: 263 LDATRGFDGQVQNIF-WLAQR-NNKGIVILVNKWDKVDKETNSVRDY 307
>gi|429765820|ref|ZP_19298100.1| ribosome biogenesis GTPase Der [Clostridium celatum DSM 1785]
gi|429185673|gb|EKY26647.1| ribosome biogenesis GTPase Der [Clostridium celatum DSM 1785]
Length = 439
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 185/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y + W H F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAEAEWLSHTFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ++ V +M RQA AIE + VI+F+VDG+
Sbjct: 62 ----EPE-------------------NQDIIVKQM----RRQANIAIETADVIMFVVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD E+A LRK+ K ++L VNK ++ K EF+ LG P+ ISA G
Sbjct: 95 EGLTAADNEVATMLRKS--KKPVVLVVNKIDNL-KDEENAWEFYKLGIGDPVAISAGLGK 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD+V + + E+ E+ IA++G+PNVGKSS++N L+GEDR IVS I
Sbjct: 152 GLGDMLDMVVAHFDSIASKEEEEED----IKIAMIGKPNVGKSSLINRLLGEDRLIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAID++ G KF LIDTAG+R+++ + E SV R A+ R+DV
Sbjct: 208 AGTTRDAIDSKVETEFG-KFTLIDTAGLRRKSKVKEE---IERYSVIRTLAAVERADVCI 263
Query: 463 LVIEAMACITEQ 474
L+I+A +TEQ
Sbjct: 264 LMIDATEGVTEQ 275
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 29/148 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L NRL+G +R IV D G TRD + + +F L+DT G+
Sbjct: 178 KIAMIGKPNVGKSSLINRLLGEDRLIVSDIAGTTRDAIDSKVETEFGKFTLIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I E ++ T+ AA+E + V I ++D
Sbjct: 238 SKVKEEI-ERYSVIRTL--------------------------AAVERADVCILMIDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK 312
G+T DE+I + + ++K I++ VNK
Sbjct: 271 GVTEQDEKIIGFAHE--LNKAIMVIVNK 296
>gi|403386906|ref|ZP_10928963.1| GTP-binding protein Der [Clostridium sp. JC122]
Length = 439
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 184/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W H F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVQDTPGVTRDRIYAEAEWLNHNFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + S + RQA AIE + VI+F+VDG+
Sbjct: 62 ----EPT-NEDIIM----------------------SQMRRQANIAIETADVIVFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
AGL +D E+A LRK+ K I+L VNK + + EF++LG +P+ ISA G
Sbjct: 95 AGLHPSDHEVAQMLRKS--KKPIVLVVNKVDRIEQE-DNAYEFYNLGIGNPVTISASQGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V +D EEE IA++G+PNVGKSS++N ++GEDR IVS I
Sbjct: 152 GLGDMLDEVVKHF----NYDDANEEEEEDIKIAMIGKPNVGKSSLINKIIGEDRNIVSNI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID++ EG KF LIDTAG+R+++ + E SV R AI R+DV
Sbjct: 208 PGTTRDAIDSKVETNEG-KFTLIDTAGLRRKSKVKEE---IERYSVVRTLTAIERADVCI 263
Query: 463 LVIEAMACITEQ 474
L+I+A +++Q
Sbjct: 264 LMIDATEGLSDQ 275
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L N+++G +R IV + PG TRD + + E +F L+DT G+
Sbjct: 178 KIAMIGKPNVGKSSLINKIIGEDRNIVSNIPGTTRDAIDSKVETNEGKFTLIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I E ++ T+ AIE + V I ++D
Sbjct: 238 SKVKEEI-ERYSVVRTL--------------------------TAIERADVCILMIDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
GL+ DE+I + + ++K I++ VNK + K + EF + + ++P L
Sbjct: 271 GLSDQDEKIVGYAHE--LNKAIMVIVNKWDLIEKDDKTMKEFQNNIAKGLSFMNYAPYLF 328
Query: 336 ISAISGTGTGELLDL 350
ISA +G ++L +
Sbjct: 329 ISAKTGQRVNKVLQM 343
>gi|346722769|ref|YP_001179705.2| GTP-binding protein Der [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|380865375|sp|A4XHX9.2|DER_CALS8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|345106740|gb|ABP66514.2| small GTP-binding protein [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 439
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 190/312 (60%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL+G RAIV D PG+TRDR+ G + W F ++DTGG+
Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIVGETEWRGITFNVIDTGGIEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S ED+ + + RQA AI+ S VIIF+VDG+
Sbjct: 63 YS-------EDIIL----------------------KQMRRQAQFAIDMSDVIIFMVDGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A+ LR + K I+LAVNK ++ + + + EF+ LG S P+P+SA G+
Sbjct: 94 TGLTDADREVANMLRVS--KKPIVLAVNKIDNISEQPI-IYEFYELGLSDPIPMSAEHGS 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V S KV G ++ EE+ I +AI+G+PN GKSS++N ++GE+R IVS I
Sbjct: 151 GVGDVLDAVVSYFDKV-GINEI--EEDSI-KVAIIGKPNTGKSSLVNYILGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID+ + EG LIDTAG+R+++ I + E S+ R AI RSD+
Sbjct: 207 PGTTRDAIDS-YVEFEGIPLTLIDTAGLRRKSKIYDN---IERYSMLRTISAIERSDICV 262
Query: 463 LVIEAMACITEQ 474
++++ ++EQ
Sbjct: 263 ILLDGTEPVSEQ 274
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PN GKS+L N ++G R IV D PG TRD + + L+DT G+
Sbjct: 177 KVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRDAIDSYVEFEGIPLTLIDTAGLRRK 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK NI E ++ TI +AIE S + + L+DG
Sbjct: 237 SKIYDNI-ERYSMLRTI--------------------------SAIERSDICVILLDGTE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
++ D +IA + + K I+AVNK ++ K E+ L F+P L
Sbjct: 270 PVSEQDAKIAGYAYE--AGKGCIIAVNKWDAVEKDEKTADEYKKQIEEKLSFLKFAPVLF 327
Query: 336 ISAISGTGTGELLDLVC 352
ISA +G +LL+ V
Sbjct: 328 ISAKTGFRVKKLLETVL 344
>gi|312134636|ref|YP_004001974.1| ribosome-associated gtpase enga [Caldicellulosiruptor owensensis
OL]
gi|311774687|gb|ADQ04174.1| ribosome-associated GTPase EngA [Caldicellulosiruptor owensensis
OL]
Length = 440
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 190/312 (60%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL+G RAIV D PG+TRDR+ G + W F ++DTGG+
Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIIGETEWRGITFNVIDTGGIEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S ED+ + + RQA A++ S VIIF+VDG+
Sbjct: 63 YS-------EDIIL----------------------KQMRRQAQFAVDMSDVIIFIVDGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A+ LR + K I+LAVNK ++ + M + EF+ LG S P+ +SA GT
Sbjct: 94 TGLTDADREVANMLRAS--KKPIVLAVNKIDNISQEPM-IYEFYELGLSDPIAMSAEHGT 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + L V G ++ EE+ I +AI+G+PN GKSS++N ++GE+R IVS I
Sbjct: 151 GVGDVLDAVVNYLDNV-GINEI--EESTI-KVAIIGKPNTGKSSLVNYILGEERVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID+ F EG LIDTAG+R+++ I + E S+ R +AI RSD+
Sbjct: 207 PGTTRDAIDSTFEF-EGIPITLIDTAGLRRKSKIYDN---VERYSMLRTLQAIERSDICI 262
Query: 463 LVIEAMACITEQ 474
++++ ++EQ
Sbjct: 263 ILLDGTEGVSEQ 274
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 90/205 (43%), Gaps = 54/205 (26%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PN GKS+L N ++G R IV D PG TRD
Sbjct: 177 KVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRD------------------------ 212
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMI----ER----QATAAIEESCVI 276
AI +T EGIP+ + A R S I ER + AIE S +
Sbjct: 213 -----------AIDSTFEFEGIPITLIDTAGLRRKSKIYDNVERYSMLRTLQAIERSDIC 261
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-------- 328
I L+DG G++ D +IA + + K I+AVNK ++ K E+
Sbjct: 262 IILLDGTEGVSEQDAKIAGYAYE--AGKGCIIAVNKWDAVEKDEKTADEYKKQIEEKLSF 319
Query: 329 LGFSP-LPISAISGTGTGELLDLVC 352
L F+P L ISA +G +LL+ +
Sbjct: 320 LKFAPVLFISAKTGFRVKKLLETIL 344
>gi|255525663|ref|ZP_05392596.1| small GTP-binding protein [Clostridium carboxidivorans P7]
gi|296185422|ref|ZP_06853832.1| ribosome-associated GTPase EngA [Clostridium carboxidivorans P7]
gi|255510649|gb|EET86956.1| small GTP-binding protein [Clostridium carboxidivorans P7]
gi|296050256|gb|EFG89680.1| ribosome-associated GTPase EngA [Clostridium carboxidivorans P7]
Length = 438
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 186/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN++ G +IV D PGVTRDR+Y + W ++ F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKMAGKRISIVQDTPGVTRDRIYAEAEWLKYNFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P D+ I S + RQAT A+E + VI+F+VDG+
Sbjct: 62 ----EPE-NSDIII----------------------SQMRRQATMAVETANVIVFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD+E+A LRK+ K ++L VNK +S K EF++LG P+ ISA
Sbjct: 95 QGLTDADKEVAQMLRKS--KKPVVLVVNKIDS-LKDEDNAYEFYNLGIGEPIAISASQAL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V S + L +E++ IA VG+PNVGKSS++N L+GEDR IVS I
Sbjct: 152 GLGDMLDKVVSYFD----DDKLDDEDDEYIKIAFVGKPNVGKSSLINKLLGEDRVIVSEI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID+ +G KF LIDTAG+R+++ + E SV R + AI R+DV
Sbjct: 208 PGTTRDAIDSYLETEQG-KFTLIDTAGLRRKSKVKEE---IERYSVIRTYTAIERADVCI 263
Query: 463 LVIEAMACITEQ 474
L+++A IT+Q
Sbjct: 264 LMLDATHGITDQ 275
>gi|409350332|ref|ZP_11233492.1| GTPase Der [Lactobacillus equicursoris CIP 110162]
gi|407877498|emb|CCK85550.1| GTPase Der [Lactobacillus equicursoris CIP 110162]
Length = 435
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 181/313 (57%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVG+PNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F ++DTGG+
Sbjct: 3 LPVVAIVGQPNVGKSTLFNRIINERVAIVEDQPGVTRDRNYAQASWMGHQFNIIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
ED +TI E I QA AIEE+ VI+ L D
Sbjct: 62 --------TWED----STIDEE-----------------IRAQAEIAIEEADVIVMLCDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K ++LAVNK ++P + + +F+SLG P+P+S G
Sbjct: 93 TKHVTDLDERIARLLYQ--AKKPVLLAVNKADNPEQR-NDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD V D + E+ + + ++GRPNVGKSSI+N L+GEDR IV+
Sbjct: 150 TGIGDLLDEVVKNF-----PADSEKTEDGVISFCVIGRPNVGKSSIVNRLLGEDRVIVAN 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
GTTRDAIDT FT + KFR++DTAGIR+R + TE SV RA A+ RSDV
Sbjct: 205 EEGTTRDAIDTPFTQGD-TKFRVVDTAGIRRRGKVYEK---TEKYSVMRAMSAMERSDVA 260
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 261 ILVLDASTGIREQ 273
>gi|408410415|ref|ZP_11181632.1| GTPase Der [Lactobacillus sp. 66c]
gi|407875409|emb|CCK83438.1| GTPase Der [Lactobacillus sp. 66c]
Length = 435
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 181/313 (57%), Gaps = 43/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVG+PNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F ++DTGG+
Sbjct: 3 LPVVAIVGQPNVGKSTLFNRIINERVAIVEDQPGVTRDRNYAQASWMGHQFNIIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
ED +TI E I QA AIEE+ VI+ L D
Sbjct: 62 --------TWED----STIDEE-----------------IRAQAEIAIEEADVIVMLCDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K ++LAVNK ++P + + +F+SLG P+P+S G
Sbjct: 93 TKHVTDLDERIARLLYQ--AKKPVLLAVNKADNPEQR-NDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TG G+LLD V D + E+ + + ++GRPNVGKSSI+N L+GEDR IV+
Sbjct: 150 TGIGDLLDEVVKNFPA-----DSEKTEDGVISFCVIGRPNVGKSSIVNRLLGEDRVIVAN 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
GTTRDAIDT FT + KFR++DTAGIR+R + TE SV RA A+ RSDV
Sbjct: 205 EEGTTRDAIDTPFTQGD-TKFRVVDTAGIRRRGKVYEK---TEKYSVMRAMSAMERSDVA 260
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 261 ILVLDASTGIREQ 273
>gi|408372254|ref|ZP_11169996.1| GTP-binding protein Der [Galbibacter sp. ck-I2-15]
gi|407742324|gb|EKF53929.1| GTP-binding protein Der [Galbibacter sp. ck-I2-15]
Length = 434
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 184/303 (60%), Gaps = 42/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL+ AIV + GVTRDR YG++ W EF ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTLFNRLIKRRDAIVDEISGVTRDRHYGKTDWNGREFSVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G + I I++Q A++E+ IIF+VD G
Sbjct: 62 ---------------VGSDDI-----------FEQEIDKQVELALDEADAIIFVVDVATG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T DEE+A LR+ +DK I +AVNK +S + + +EF++LG IS+I+G+GT
Sbjct: 96 VTGMDEEVAQLLRQ--VDKPIFMAVNKVDSAMR-VADAAEFYALGLGDYYTISSINGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GELLD V L + EG +E+E +P A+VGRPN GKSS +NAL+GEDR IV+ I+G
Sbjct: 153 GELLDAVVEALPEDEGA---IEDE--LPRFAVVGRPNAGKSSFINALLGEDRYIVTDIAG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD++DT++ G +F L+DTAGIR++A + E +V R+ RAI SDV LV
Sbjct: 208 TTRDSVDTKYN-RFGFEFNLVDTAGIRRKAKVKED---LEFYTVMRSVRAIEHSDVCLLV 263
Query: 465 IEA 467
++A
Sbjct: 264 LDA 266
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 83/187 (44%), Gaps = 35/187 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E LPR A+VGRPN GKS+ N L+G +R IV D G TRD + + EF LVDT
Sbjct: 171 EDELPRFAVVGRPNAGKSSFINALLGEDRYIVTDIAGTTRDSVDTKYNRFGFEFNLVDTA 230
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL T + ++ AIE S V + +
Sbjct: 231 GI----RRKAKVKEDLEFYTVM-----------------------RSVRAIEHSDVCLLV 263
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFSP 333
+D G D I WL + K I++ VNK + K V EF + F+
Sbjct: 264 LDATRGFEGQDLNIF-WLAERNR-KGIVILVNKWDLVEKQTNTVKEFETYIRKQIEPFTD 321
Query: 334 LPISAIS 340
+PI IS
Sbjct: 322 VPIVFIS 328
>gi|328957352|ref|YP_004374738.1| GTP-binding protein EngA [Carnobacterium sp. 17-4]
gi|328673676|gb|AEB29722.1| GTP-binding protein EngA [Carnobacterium sp. 17-4]
Length = 437
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/314 (43%), Positives = 184/314 (58%), Gaps = 45/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D GVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERISIVEDVSGVTRDRIYAPAEWLGKEFNVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+G E P + I+ QA A++E+ VIIF+ +
Sbjct: 62 ----------------DLGDE--PFLEQ----------IKYQAEIAMDEADVIIFITSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAIS 340
+T ADE +A L + +K ++LAVNK ++P R I +F+SLG P PIS
Sbjct: 94 EHITDADENVAKILYRT--NKPVLLAVNKVDNPEMRNDIF---DFYSLGLGEPFPISGSH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G+LLD S + E E ++ + +++GRPNVGKSS++NA++GEDR IVS
Sbjct: 149 GLGIGDLLDAAISHFPE----EQEEEYDDSVIKFSLIGRPNVGKSSLVNAILGEDRVIVS 204
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I+GTTRDAIDT F G +G +F +IDTAG+RK+ + + TE SV RA RAI RSDV
Sbjct: 205 SIAGTTRDAIDTAFVGEDGTEFVMIDTAGMRKKGKVYEN---TERYSVLRALRAIERSDV 261
Query: 461 VALVIEAMACITEQ 474
V V+ A I EQ
Sbjct: 262 VLCVLNAEEGIREQ 275
>gi|325954552|ref|YP_004238212.1| GTP-binding protein engA [Weeksella virosa DSM 16922]
gi|323437170|gb|ADX67634.1| GTP-binding protein engA [Weeksella virosa DSM 16922]
Length = 435
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/303 (43%), Positives = 178/303 (58%), Gaps = 41/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRLV +AIV D GVTRDR YG+S W EF ++DTGG V
Sbjct: 5 VAIVGRPNVGKSTFFNRLVQKRQAIVDDVSGVTRDRHYGKSDWNGVEFTVIDTGGY--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
S+ E+ I +Q A++E+ VI+F+VD Q G
Sbjct: 63 GSEDTFEEE---------------------------IRKQVELAVDEANVILFMVDNQVG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
LT D+E++ LRK F L VNK ++ K + EF++LGF + I+AISG+GT
Sbjct: 96 LTDMDKEVSHLLRKAKKKTF--LVVNKVDT-NKNLDDSYEFYTLGFDKIFTIAAISGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V + T++ ++ +P IAIVGRPN GKS+++NAL+GE+R IV+ ++G
Sbjct: 153 GDLLDEVVDSFE----TKEFEDKFEGLPRIAIVGRPNAGKSTLINALLGEERNIVTDVAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+I+T + G KF L+DTAG+RK+ +A E SV RA R I DV LV
Sbjct: 209 TTRDSIETLY-NKFGHKFVLVDTAGMRKKGKVAED---LEFYSVMRAIRTIEECDVCVLV 264
Query: 465 IEA 467
++
Sbjct: 265 VDG 267
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 84/185 (45%), Gaps = 35/185 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR+AIVGRPN GKS L N L+G R IV D G TRD + H+F+LVDT G+
Sbjct: 175 LPRIAIVGRPNAGKSTLINALLGEERNIVTDVAGTTRDSIETLYNKFGHKFVLVDTAGM- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + +A IEE V + +VDG
Sbjct: 234 ---RKKGKVAEDLEFYSVM-----------------------RAIRTIEECDVCVLVVDG 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFSPLPI 336
GL A D I +N K +++ VNK + K + +F + F+ +PI
Sbjct: 268 SRGLEAQDLNILYLAERN--RKGVVILVNKWDLVEKQTNTMRDFEKMIKTKIAPFTDVPI 325
Query: 337 SAISG 341
IS
Sbjct: 326 LFISA 330
>gi|229815385|ref|ZP_04445720.1| hypothetical protein COLINT_02432 [Collinsella intestinalis DSM
13280]
gi|229809165|gb|EEP44932.1| hypothetical protein COLINT_02432 [Collinsella intestinalis DSM
13280]
Length = 445
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 186/312 (59%), Gaps = 38/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS L NR+ + AIV GVTRDR Y + W EFMLVDTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLVNRIAQTSDAIVHQSRGVTRDRSYHVADWNGREFMLVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P +D+ T+ I QA AA EE+ VI+F+VDG
Sbjct: 62 ----EPMKSDDVFATS----------------------IRDQALAAAEEAAVILFVVDGS 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G T DE +A +RK + K L VNK ++P + + EF+SLG P+ +SA+ G
Sbjct: 96 VGATEEDESVARMVRK--LKKPTFLLVNKLDNPARENDSLWEFYSLGVGDPVAVSALHGH 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD V S L + G ED +E +AI+GRPN GKSS+ N ++G DR+IVS I
Sbjct: 154 GTGDLLDEVVSLLPEDAGDED---DEPDTLRVAIIGRPNAGKSSLFNKMIGNDRSIVSNI 210
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT +G+++R++DTAGIRK++ + + E S+ R RAI R+DV
Sbjct: 211 AGTTRDAIDT-VVERDGKRYRMVDTAGIRKKSTVYEN---IEYYSMVRGLRAIDRADVAL 266
Query: 463 LVIEAMACITEQ 474
LV++A A +TEQ
Sbjct: 267 LVVDASAGVTEQ 278
>gi|225028014|ref|ZP_03717206.1| hypothetical protein EUBHAL_02283 [Eubacterium hallii DSM 3353]
gi|224954728|gb|EEG35937.1| ribosome biogenesis GTPase Der [Eubacterium hallii DSM 3353]
Length = 445
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 186/312 (59%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN L G +IV D PGVTRDR+Y W +++F L+DTGG+
Sbjct: 8 PVVAVVGRPNVGKSTLFNALAGSRISIVEDTPGVTRDRIYAEVSWLDYQFTLIDTGGI-- 65
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P +D+ I S + QA AI + VI+FLVD +
Sbjct: 66 ----EPE-SDDIII----------------------SRMREQAETAIMTADVILFLVDVR 98
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD ++AD LR+++ + ++L VNK ++ K + V EF++LG P+P+SA
Sbjct: 99 QGLVDADFKVADMLRRSH--RPVVLVVNKVDNFDKFMPDVYEFYNLGLGDPIPVSAQGKL 156
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V ++K E EEE+ P IA++G+PN GKSSI+N L+GE+R IVSP+
Sbjct: 157 GIGDMLDQV---VEKFEAPVQEEEEEDDRPKIAVIGKPNAGKSSIINKLLGEERVIVSPV 213
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT GQ++ IDTAG+R+++ I E S+ R A+ R DV
Sbjct: 214 AGTTRDAIDTT-VKRNGQEYVFIDTAGLRRKSKIKEE---LERYSIIRTVTAVERCDVAV 269
Query: 463 LVIEAMACITEQ 474
L+I+A ITEQ
Sbjct: 270 LIIDATEGITEQ 281
>gi|315924473|ref|ZP_07920695.1| ribosome-associated GTPase EngA [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315622352|gb|EFV02311.1| ribosome-associated GTPase EngA [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 440
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/312 (41%), Positives = 184/312 (58%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VG+PNVGKS LFN+LVG AIV + PGVTRDR+ + W H F L+DTGG+
Sbjct: 3 PIVAVVGKPNVGKSTLFNKLVGERIAIVENTPGVTRDRIIADAEWQNHRFTLIDTGGI-- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K+ IM + + QA AIE + +I+ L DG+
Sbjct: 61 ELKTGNTIMHQMRV---------------------------QAEIAIETADLILLLCDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADE++AD LRK + K +I+ VNK +S + ++ EF++LG PLPISA G
Sbjct: 94 EGMTAADEDVADMLRKQH--KKVIVVVNKLDSVKLE-ERLYEFYNLGLGDPLPISAEQGL 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + L ++E+ IA+VG+PN GKS+++N L+GE+R IVS I
Sbjct: 151 GLGDLLDAIVDN---TAALYQLADDEDGSLHIAVVGKPNAGKSTLVNQLIGENRMIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAID++ G ++ IDTAG+R+++ IA E S+ RA A+ R+DVV
Sbjct: 208 PGTTRDAIDSKIERG-GVEYTFIDTAGLRRKSKIADE---VERYSIIRAIAAVDRADVVL 263
Query: 463 LVIEAMACITEQ 474
+++ A +TEQ
Sbjct: 264 MMVNAQTGVTEQ 275
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VG+PN GKS L N+L+G NR IV D PG TRD + + G E+ +DT G+ S
Sbjct: 179 IAVVGKPNAGKSTLVNQLIGENRMIVSDIPGTTRDAIDSKIERGGVEYTFIDTAGLRRKS 238
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K I +++ + I +A AA++ + V++ +V+ Q G
Sbjct: 239 K----IADEVERYSII-----------------------RAIAAVDRADVVLMMVNAQTG 271
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSP----LPI 336
+T D +IA ++ I+ VNK + K + + SL F P L I
Sbjct: 272 VTEQDSKIAGIAHNRFIPTIIV--VNKWDLIEKDTKTMQKMTGDIRNSLAFMPYAPMLFI 329
Query: 337 SAISGTGTGELLD 349
SA +G ++ D
Sbjct: 330 SAKTGKRAEKIYD 342
>gi|379011828|ref|YP_005269640.1| GTP-binding protein EngA [Acetobacterium woodii DSM 1030]
gi|375302617|gb|AFA48751.1| GTP-binding protein EngA [Acetobacterium woodii DSM 1030]
Length = 439
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 190/312 (60%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN+LVG AIV D PGVTRDR+ + W H F L+DTGG+
Sbjct: 4 PIVAVVGRPNVGKSTLFNKLVGERIAIVEDTPGVTRDRIIADAEWQNHHFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ +D+ + + QA AI+ + +I+ +VDG+
Sbjct: 62 ----EPHTKDDILLQMRV-----------------------QAEVAIDMADLIVLMVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
G+T++D E+A+ +RK+ DK ++LAVNK +S R EF++LG PL ISA G
Sbjct: 95 EGMTSSDLEVANMIRKH--DKDVLLAVNKVDS-RNLENNAYEFYNLGIGEPLAISAEQGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + + +K+ E+ +++R+ +A++G+PNVGKS+++N ++GE+R IVS I
Sbjct: 152 GLGDLLDEIINHVKRYYDEEE--TDDDRL-KVAVIGKPNVGKSTLINKILGEERLIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDA+DT +G+ + LIDTAG+R++ I E S+ RA A+ RS VV
Sbjct: 209 PGTTRDAVDTSVR-YDGEDYVLIDTAGLRRKKKIYED---IERYSIVRAIAAVERSQVVL 264
Query: 463 LVIEAMACITEQ 474
++I+ +TEQ
Sbjct: 265 VLIDGSQGVTEQ 276
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA++G+PNVGKS L N+++G R IV D PG TRD + + +++L+DT G+
Sbjct: 179 KVAVIGKPNVGKSTLINKILGEERLIVSDIPGTTRDAVDTSVRYDGEDYVLIDTAGL--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + I ED+ + + +A AA+E S V++ L+DG
Sbjct: 236 -RRKKKIYEDIERYSIV-----------------------RAIAAVERSQVVLVLIDGSQ 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D +IA + II VNK ++ K
Sbjct: 272 GVTEQDAKIAGIAHNRSIPSIII--VNKWDAVEK 303
>gi|291519504|emb|CBK74725.1| ribosome-associated GTPase EngA [Butyrivibrio fibrisolvens 16/4]
Length = 441
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/312 (41%), Positives = 186/312 (59%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W ++F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGERISIVKDTPGVTRDRIYADVSWLNYDFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ T + +++M QA AI+ + VIIFLVD +
Sbjct: 62 ----EPD-------------------TNDIILSQM----REQAQIAIDTADVIIFLVDVK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR+++ K +IL VNK +S + + V EF++LG P+P+SA S
Sbjct: 95 QGLQDSDSKVADMLRRSH--KPVILVVNKVDSFERDMADVYEFYNLGIGDPIPVSASSRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + G E EE+ P IA++G+PNVGKSS++N L GE+R IVS I
Sbjct: 153 GFGDMLDKVVEYFPEQSGEE----EEDDTPKIAVIGKPNVGKSSLINKLCGEERVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT + + IDTAG+R+++ I E S+ RA ++ ++DVV
Sbjct: 209 AGTTRDAVDTRVRYNH-KDYIFIDTAGLRRKSKIKED---LERYSIVRAVASVEKADVVI 264
Query: 463 LVIEAMACITEQ 474
++I+A +TEQ
Sbjct: 265 IMIDATEGVTEQ 276
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P++A++G+PNVGKS+L N+L G R IV D G TRD + R + +++ +DT G+
Sbjct: 178 PKIAVIGKPNVGKSSLINKLCGEERVIVSDIAGTTRDAVDTRVRYNHKDYIFIDTAGLRR 237
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK I EDL + + +A A++E++ V+I ++D
Sbjct: 238 KSK----IKEDLERYSIV-----------------------RAVASVEKADVVIIMIDAT 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP----L 334
G+T D +IA + K II+ VNK ++ K + E + L F P L
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGIIICVNKWDAIEKNDKTMKEHETKIRQILSFMPYASIL 328
Query: 335 PISAISGTGTGELLDLV 351
IS SG G++ + +
Sbjct: 329 FISVKSGQRLGKIYETI 345
>gi|313896288|ref|ZP_07829841.1| ribosome biogenesis GTPase Der [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975087|gb|EFR40549.1| ribosome biogenesis GTPase Der [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 441
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 187/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRISIVDDMPGVTRDRIYMDAEWLNHEFTIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + + M S QA A+EE+ VI+FLVDG+
Sbjct: 61 ----------------------IEFDESDHILRSMRS----QAELAMEEADVILFLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLTA+DEE+ LR+ +K +ILAVNK +S + + + +F++LG P+PISA +
Sbjct: 95 AGLTASDEEVGRLLRRT--NKPVILAVNKIDSFERENL-IYDFYALGLGDPIPISASNAM 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V + V E+ E E AIA+VGRPNVGKSS++N L+GE+R IVS +
Sbjct: 152 NLGDLLDAVVA----VFPREEAEEREPDEIAIAVVGRPNVGKSSLVNRLLGEERVIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT FT +G K+ LIDTAG+R++ I E SV R+ RAI R+ VV
Sbjct: 208 PGTTRDAIDTHFT-RDGAKYLLIDTAGMRRKGKITLP---VERYSVMRSLRAIDRAGVVL 263
Query: 463 LVIEAMACITEQ 474
+VI A I EQ
Sbjct: 264 MVINAAEGILEQ 275
>gi|291546330|emb|CBL19438.1| ribosome-associated GTPase EngA [Ruminococcus sp. SR1/5]
Length = 441
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 187/312 (59%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G N +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGDNISIVKDTPGVTRDRIYADVTWLDRTFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ + + ++RM QA AI+ + VIIF+ D +
Sbjct: 62 ----EPD-------------------SSDIILSRM----REQAQIAIDTADVIIFITDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR++ K + L VNK +S +K +M V EF++LG P+PISA +
Sbjct: 95 QGLVDSDAKVADMLRRS--GKPVRLVVNKVDSHQKYMMDVYEFYNLGIGEPIPISAANRQ 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V E ED ++ IP IAIVG+PNVGKSS++N L+GE+R IVS I
Sbjct: 153 GLGDMLDEVIKEFPDKSEEED----QDDIPKIAIVGKPNVGKSSLINKLLGEERVIVSNI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT+ T + + + IDTAG+R++ + E SV R A+ R+DVV
Sbjct: 209 AGTTRDAIDTKVTWNK-KDYIFIDTAGLRRKGKVKEE---IERYSVIRTVTAVERADVVV 264
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 265 VVIDASEGVTEQ 276
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 29/156 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P++AIVG+PNVGKS+L N+L+G R IV + G TRD + + W + +++ +DT G+
Sbjct: 177 IPKIAIVGKPNVGKSSLINKLLGEERVIVSNIAGTTRDAIDTKVTWNKKDYIFIDTAGLR 236
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K + I E ++ T+ A+E + V++ ++D
Sbjct: 237 RKGKVKEEI-ERYSVIRTV--------------------------TAVERADVVVVVIDA 269
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D +IA K II+AVNK ++ K
Sbjct: 270 SEGVTEQDAKIAGIAHDR--GKGIIVAVNKWDAIEK 303
>gi|373501194|ref|ZP_09591559.1| GTP-binding protein engA [Prevotella micans F0438]
gi|371950101|gb|EHO67960.1| GTP-binding protein engA [Prevotella micans F0438]
Length = 437
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 183/312 (58%), Gaps = 45/312 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL RAIV + G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTKSRRAIVSETAGTTRDRQYGKCEWNGKEFSIVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I RQ A EE+ +++F+VD Q G
Sbjct: 63 KSD-DIFED--------------------------AIRRQVIVATEEADLVLFIVDTQTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + +IL NK ++ + + +EF+ LG P+P+SA+SG G+
Sbjct: 96 ITDWDEDVAQILRRTKLP--VILVANKVDNNAQ-YYETAEFYKLGLGEPIPVSAMSGGGS 152
Query: 345 GELLDLVCSELKKVEGTEDLVEE--ENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD++ +L ++L +E E+ +P A+VGRPN GKSSI+NA +GEDR IV+ I
Sbjct: 153 GDLLDILLEKL------QNLPDEAPEDELPRFAVVGRPNAGKSSIINAFIGEDRNIVTEI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+I T +T G F L+DTAGIR++ + E SV R+ R+I SDV
Sbjct: 207 AGTTRDSIYTRYT-KFGFDFYLVDTAGIRRKNRVTED---LEFYSVMRSIRSIENSDVCI 262
Query: 463 LVIEAMACITEQ 474
L+I+A I Q
Sbjct: 263 LMIDATRGIEAQ 274
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 29/154 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE LPR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT
Sbjct: 171 PEDELPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYTKFGFDFYLVDT 230
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + + EDL + + ++ +IE S V I
Sbjct: 231 AGI----RRKNRVTEDLEFYSVM-----------------------RSIRSIENSDVCIL 263
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
++D G+ A D I ++KN +K +++ VNK
Sbjct: 264 MIDATRGIEAQDMNIFQLIQKN--NKSLVVVVNK 295
>gi|419814980|ref|ZP_14339694.1| GTP-binding protein Der, partial [Streptococcus sp. GMD2S]
gi|404470279|gb|EKA14928.1| GTP-binding protein Der, partial [Streptococcus sp. GMD2S]
Length = 249
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 129/290 (44%), Positives = 173/290 (59%), Gaps = 48/290 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG++LD + VE VEEEN + +++GRPNVGKSS++NA++GEDR I
Sbjct: 148 HGIGTGDVLDAI------VENLPHEVEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI 201
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSV 448
SP++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV
Sbjct: 202 ASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSV 248
>gi|227529194|ref|ZP_03959243.1| GTP-binding protein EngA [Lactobacillus vaginalis ATCC 49540]
gi|227350919|gb|EEJ41210.1| GTP-binding protein EngA [Lactobacillus vaginalis ATCC 49540]
Length = 437
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/311 (43%), Positives = 187/311 (60%), Gaps = 42/311 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G +IV D PGVTRDR+Y + W F L+DTGG
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGERISIVEDTPGVTRDRIYAHAEWLGKNFNLIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + PL T+ I +QA AI+E+ VI+ +VD Q
Sbjct: 61 -----------------IEISDQPLLTQ----------IRQQAEVAIDEADVIVLVVDIQ 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ DK I+LAVNK ++P + + +F+SLG P P+S + G
Sbjct: 94 NGVTDADEQVAKILYRS--DKPIVLAVNKVDNPERR-SDIYDFYSLGLGEPYPVSGVHGV 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + + ED + +++GRPNVGKSS++NA++GE+R IVS +
Sbjct: 151 GVGDLLDAVINHFPETADNED-----DGTIHFSLIGRPNVGKSSLVNAILGENRVIVSNV 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAI+T FT +G++F +IDTAGIRK+ I + TE S+ R+ RAI SDVV
Sbjct: 206 AGTTRDAINTRFTAKDGREFTMIDTAGIRKKGKIYEN---TERYSLMRSMRAIDDSDVVL 262
Query: 463 LVIEAMACITE 473
+V+ A I E
Sbjct: 263 VVLNAEEGIRE 273
>gi|260910017|ref|ZP_05916700.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635847|gb|EEX53854.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 472 str.
F0295]
Length = 437
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/311 (44%), Positives = 179/311 (57%), Gaps = 43/311 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V+N
Sbjct: 5 VAIVGRPNVGKSTLFNRLTKTRSAIVSDTAGTTRDRQYGKCDWSGREFSVVDTGGWVVN- 63
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+I ED I RQ A EE+ +++FLVD
Sbjct: 64 ---SDDIFED--------------------------AIRRQVLVATEEADLVLFLVDVNT 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
G+T DE++A LR+ + ++L VNK ++ + I + F+SLG P PISA +G+G
Sbjct: 95 GVTDLDEDVAQILRRTKVP--VLLVVNKADNNEQ-IYEAPVFYSLGLGDPFPISAATGSG 151
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
TG+LLD V +LK G + VE+ IP A+VGRPNVGKSSI+NA +GEDR IV+ I+
Sbjct: 152 TGDLLDAVIEKLK--PGDSENVEDG--IPRFAVVGRPNVGKSSIINAFIGEDRNIVTEIA 207
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRD+I T F G F L+DTAGIR++ + E SV R+ R+I SDV L
Sbjct: 208 GTTRDSIYTRF-DKFGFDFYLVDTAGIRRKNKVTED---LEFYSVMRSIRSIEHSDVCIL 263
Query: 464 VIEAMACITEQ 474
+I+A I Q
Sbjct: 264 MIDATRGIEAQ 274
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 29/153 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR A+VGRPNVGKS++ N +G +R IV + G TRD +Y R +F LVDT
Sbjct: 172 EDGIPRFAVVGRPNVGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRFDKFGFDFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ +IE S V I +
Sbjct: 232 GI----RRKNKVTEDLEFYSVM-----------------------RSIRSIEHSDVCILM 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
+D G+ A D I ++KN K +++ VNK
Sbjct: 265 IDATRGIEAQDMNIFQLIQKN--QKSLVVVVNK 295
>gi|404370873|ref|ZP_10976189.1| GTPase Der [Clostridium sp. 7_2_43FAA]
gi|226913004|gb|EEH98205.1| GTPase Der [Clostridium sp. 7_2_43FAA]
Length = 438
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 186/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y ++ W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGQRISIVQDTPGVTRDRVYAQAEWLNYNFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + + RQA AIE + VIIF+VDG+
Sbjct: 62 ----EPE-REDIIV----------------------KQMRRQANIAIETADVIIFVVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A+ LRK+ K ++L VNK +S ++ EF++LG P+ ISA
Sbjct: 95 EGLTPADHEVANMLRKS--KKEVVLVVNKVDSLKEE-ENAWEFYNLGIGDPVTISASQAL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V K + +EE+ IA++G+PNVGKSS++N L+GE+R IVS I
Sbjct: 152 GLGDMLDRVVENFDKF----NEEDEEDEFIRIAMIGKPNVGKSSLINRLLGEERLIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD+ID+ +G KF L+DTAG+R+++ + E SV R + AI R+DV
Sbjct: 208 PGTTRDSIDSALETEQG-KFILVDTAGLRRKSKVKEE---IERYSVIRTYAAIERADVCI 263
Query: 463 LVIEAMACITEQ 474
L+I+A +TEQ
Sbjct: 264 LMIDATEGVTEQ 275
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 91/194 (46%), Gaps = 38/194 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++G+PNVGKS+L NRL+G R IV D PG TRD + + +F+LVDT G+
Sbjct: 178 RIAMIGKPNVGKSSLINRLLGEERLIVSDIPGTTRDSIDSALETEQGKFILVDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I I T AAIE + V I ++D
Sbjct: 238 SKVKEEIERYSVIRT---------------------------YAAIERADVCILMIDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP------ 335
G+T DE+I + + M+K I++ VNK E K + + E + L
Sbjct: 271 GVTEQDEKIIGYAHE--MNKAIMVIVNKWDLIEKDDKTMQRYKEELQMNLKFLKYAKYLF 328
Query: 336 ISAISGTGTGELLD 349
ISA +G T ++L+
Sbjct: 329 ISAKTGQRTHKVLE 342
>gi|220929546|ref|YP_002506455.1| GTP-binding protein EngA [Clostridium cellulolyticum H10]
gi|254783147|sp|B8I442.1|DER_CLOCE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|219999874|gb|ACL76475.1| small GTP-binding protein [Clostridium cellulolyticum H10]
Length = 441
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/313 (42%), Positives = 183/313 (58%), Gaps = 42/313 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS FN L G +IV D PGVTRDR+Y W +F L+DTGG+
Sbjct: 4 PVVAVVGRPNVGKSTFFNYLAGSRISIVEDTPGVTRDRIYTEIEWRNTKFTLIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S ED+ + ++RQA AIE + VIIF+VD +
Sbjct: 64 YS-------EDIIM----------------------QQMKRQAEIAIETADVIIFMVDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP-ISAISGT 342
G+TA D+E+A LRK+ K ++L VNK + V EF++LG + IS++ G
Sbjct: 95 DGMTATDKEVATMLRKS--QKPVVLCVNKVDRVGDPPPDVYEFYNLGMGEMQIISSVHGL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLV-EEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G G+LLD V ED+ EEE + +A+VG+PN GKSS++N+++GE+R IVS
Sbjct: 153 GIGDLLDEVFEHF-----PEDIASEEEEDVIKVAVVGKPNAGKSSLINSILGENRVIVSN 207
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRDAIDT +GQK+ IDTAGIR+R+ I+ + E S R++ A+ R+DV
Sbjct: 208 IPGTTRDAIDTHVE-KDGQKYTFIDTAGIRRRSKISEN---IEKYSTIRSWTAVERADVC 263
Query: 462 ALVIEAMACITEQ 474
++I+A +TEQ
Sbjct: 264 LIMIDAEDGVTEQ 276
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA+VG+PN GKS+L N ++G NR IV + PG TRD + ++ +DT G+
Sbjct: 179 KVAVVGKPNAGKSSLINSILGENRVIVSNIPGTTRDAIDTHVEKDGQKYTFIDTAGIRRR 238
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK I E++ +TI ++ A+E + V + ++D +
Sbjct: 239 SK----ISENIEKYSTI-----------------------RSWTAVERADVCLIMIDAED 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGF---SP-LP 335
G+T D +IA + + K I+ +NK + K + E+ LGF +P L
Sbjct: 272 GVTEQDTKIAGYAHQQ--GKASIIVINKWDLIEKQTGTLEEYRKVVHEKLGFMTYAPVLF 329
Query: 336 ISAISGTGTGELLDLV 351
ISA +G ++ +L+
Sbjct: 330 ISAKTGQRVIKIYELI 345
>gi|288801362|ref|ZP_06406816.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 299 str.
F0039]
gi|288331745|gb|EFC70229.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 299 str.
F0039]
Length = 437
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 142/311 (45%), Positives = 178/311 (57%), Gaps = 43/311 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V+N
Sbjct: 5 VAIVGRPNVGKSTLFNRLTKTRSAIVSDTAGTTRDRQYGKVDWNGREFSIVDTGGWVVN- 63
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+I ED I RQ A EE+ +++F+VD Q
Sbjct: 64 ---SEDIFED--------------------------AIRRQVLIATEEANLVLFVVDVQT 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
GLT DE++A LRK+ + IIL VNK + + +EF+SLG P IS+ +G+G
Sbjct: 95 GLTDWDEDVAQILRKSKVP--IILVVNKVDKNEQQ-YDAAEFYSLGLGEPFCISSSTGSG 151
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
TG+LLD V + L K E E L E+ IP A+VGRPN GKSSI+NA +GEDR IV+ I+
Sbjct: 152 TGDLLDEVINNL-KAEVDESL---EDGIPRFAVVGRPNAGKSSIINAFMGEDRNIVTEIA 207
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRD+I T F G F L+DTAGIR++ + E SV R+ RAI SDV L
Sbjct: 208 GTTRDSIYTRF-DKFGFDFYLVDTAGIRRKNKVTED---LEFYSVMRSIRAIENSDVCIL 263
Query: 464 VIEAMACITEQ 474
+I+A I Q
Sbjct: 264 MIDATRGIETQ 274
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 29/155 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT
Sbjct: 172 EDGIPRFAVVGRPNAGKSSIINAFMGEDRNIVTEIAGTTRDSIYTRFDKFGFDFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIE S V I +
Sbjct: 232 GI----RRKNKVTEDLEFYSVM-----------------------RSIRAIENSDVCILM 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+D G+ D I +++N +K +++ VNK +
Sbjct: 265 IDATRGIETQDMNIFQLIQRN--NKSLVVVVNKWD 297
>gi|167753390|ref|ZP_02425517.1| hypothetical protein ALIPUT_01664 [Alistipes putredinis DSM 17216]
gi|167658015|gb|EDS02145.1| ribosome biogenesis GTPase Der [Alistipes putredinis DSM 17216]
Length = 433
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 178/310 (57%), Gaps = 42/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRLVG +AIV G TRDR YG++ W EF ++DTGG S
Sbjct: 4 VAIVGRPNVGKSTLFNRLVGQRKAIVDATAGTTRDRHYGKTDWNGREFSVIDTGG---YS 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ +I ED I RQ AIEE+ VI+FLV+ G
Sbjct: 61 VNSDDIFED--------------------------DIRRQVMLAIEEADVILFLVEVNTG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D+ +AD LR+ K ++L NK ++ I EF+SLG P IS++SG+GT
Sbjct: 95 ITDLDQMMADILRRT--SKKVLLVCNKVDN-YDLIYSSHEFYSLGLGEPYCISSMSGSGT 151
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+L+D + +L + EE +P I IVGRPNVGKSS+ NAL+GE+R IV+PI+G
Sbjct: 152 GDLMDEIVRDLPP-----ETKNEEEELPRITIVGRPNVGKSSLTNALLGEERNIVTPIAG 206
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAI + + G F L+DTAG+RK+ + E SV R+ RAI SDV L+
Sbjct: 207 TTRDAIHSRY-NKYGLDFYLVDTAGMRKKGKVTED---LEFYSVMRSIRAIEESDVCILM 262
Query: 465 IEAMACITEQ 474
++A + Q
Sbjct: 263 LDAQQGLESQ 272
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 37/208 (17%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E LPR+ IVGRPNVGKS+L N L+G R IV G TRD ++ R +F LVDT
Sbjct: 170 EEELPRITIVGRPNVGKSSLTNALLGEERNIVTPIAGTTRDAIHSRYNKYGLDFYLVDTA 229
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIEES V I +
Sbjct: 230 GM----RKKGKVTEDLEFYSVM-----------------------RSIRAIEESDVCILM 262
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLG-------FS 332
+D Q GL + D I + + +N K ++ VNK + KG + E W F+
Sbjct: 263 LDAQQGLESQDLNIHNLIVRN--RKGCVIVVNKWDLVEKGNNTMKE-WKEALAKKLAPFN 319
Query: 333 PLPISAISGTGTGELLDLVCSELKKVEG 360
+PI S +L+++ + ++ E
Sbjct: 320 DIPIIFTSVLNKQRILEVLQTAIRVYEN 347
>gi|291087651|ref|ZP_06347028.2| ribosome-associated GTPase EngA [Clostridium sp. M62/1]
gi|291074566|gb|EFE11930.1| ribosome biogenesis GTPase Der [Clostridium sp. M62/1]
Length = 446
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 185/312 (59%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VG PNVGKS LFN L G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 8 PVVAVVGCPNVGKSTLFNVLAGEMISIVKDTPGVTRDRIYADCTWLDKAFTLIDTGGI-- 65
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ +R+ +A+M QA AI + VIIF+VD +
Sbjct: 66 ----EPD-------------------SRDIILAQM----REQAEIAIATADVIIFIVDVR 98
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +D ++AD LRK+ K +ILAVNK +S K V EF++LG P+PISA S
Sbjct: 99 QGLTDSDSKVADMLRKS--RKPVILAVNKVDSFAKFGNDVYEFYNLGIGDPIPISAASRL 156
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G GELLD V + + G E+ + P IAIVG+PNVGKSSI+N L+GE+R IVS I
Sbjct: 157 GLGELLDAVVAHFPEDTGEEEDDDR----PRIAIVGKPNVGKSSIVNKLLGENRVIVSNI 212
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DTE G ++ IDTAG+R++ I E S+ R A+ R+DVV
Sbjct: 213 AGTTRDAVDTEIV-HNGTEYVFIDTAGLRRKNKIKEE---LERYSIIRTVTAVERADVVL 268
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 269 VVIDATEGVTEQ 280
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVG+PNVGKS++ N+L+G NR IV + G TRD + E++ +DT G+
Sbjct: 182 PRIAIVGKPNVGKSSIVNKLLGENRVIVSNIAGTTRDAVDTEIVHNGTEYVFIDTAGL-- 239
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E+L + I + A+E + V++ ++D
Sbjct: 240 --RRKNKIKEELERYSII-----------------------RTVTAVERADVVLVVIDAT 274
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSPLP--- 335
G+T D +IA K II+ VNK ++ K + E+ + L F P
Sbjct: 275 EGVTEQDAKIAGIAHDR--GKGIIIVVNKWDAIEKNDKTIYEYTNKIKTILSFVPYAEYV 332
Query: 336 -ISAISGTGTGELLDLV 351
+SA +G +L DL+
Sbjct: 333 FVSAQTGQRLNKLYDLI 349
>gi|379730094|ref|YP_005322290.1| gtp-binding protein enga [Saprospira grandis str. Lewin]
gi|378575705|gb|AFC24706.1| gtp-binding protein enga [Saprospira grandis str. Lewin]
Length = 433
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 185/310 (59%), Gaps = 43/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNR++G +AIV D GVTRDR YG + W F LVDTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRMLGMRQAIVDDVSGVTRDRQYGSTEWNGKRFHLVDTGGFIGDG 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
ED+ + I +Q AIEE+ V++F+VD + G
Sbjct: 65 -------EDV----------------------FAAAIRKQVRMAIEEAQVVVFMVDVETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T D ++ L++ ++K ++LAVNK ++ + +M + EFW++GF L PIS+ SG+GT
Sbjct: 96 ITDLDAQVGRLLKE--INKPVLLAVNKVDNNERQLM-IHEFWAMGFDNLYPISSTSGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD + + + EE+NR+P IAIVGRPN GKSS +N L+ E+R+IV+ I+G
Sbjct: 153 GDLLDALTDIIPGIP------EEDNRLPHIAIVGRPNAGKSSFVNLLLDEERSIVTDIAG 206
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD++ + GQ+F L+DTAG+R++ ++ E SV RA R++ +D+ L+
Sbjct: 207 TTRDSVHAHYN-KFGQEFILVDTAGLRRKRSVKED---LEFYSVLRAIRSLESADICVLM 262
Query: 465 IEAMACITEQ 474
++A I Q
Sbjct: 263 LDASKGIEAQ 272
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 37/194 (19%)
Query: 155 IGNVPE--HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
I +PE + LP +AIVGRPN GKS+ N L+ R+IV D G TRD ++ E
Sbjct: 163 IPGIPEEDNRLPHIAIVGRPNAGKSSFVNLLLDEERSIVTDIAGTTRDSVHAHYNKFGQE 222
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F+LVDT G+ + + ++ EDL + + +A ++E
Sbjct: 223 FILVDTAGL----RRKRSVKEDLEFYSVL-----------------------RAIRSLES 255
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS---- 328
+ + + ++D G+ A D I KN +K I++ VNK + K + E+
Sbjct: 256 ADICVLMLDASKGIEAQDLNIFRLAIKN--NKGIVIFVNKWDLVEKSTNTLKEYEDHIRE 313
Query: 329 --LGFSPLPISAIS 340
FS +PI IS
Sbjct: 314 RIAPFSDVPIVFIS 327
>gi|304382194|ref|ZP_07364702.1| ribosome-associated GTPase EngA [Prevotella marshii DSM 16973]
gi|304336659|gb|EFM02887.1| ribosome-associated GTPase EngA [Prevotella marshii DSM 16973]
Length = 437
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 178/311 (57%), Gaps = 43/311 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL RAIV DE G TRDR YG+ W EF +VDTGG V+N
Sbjct: 5 VAIVGRPNVGKSTLFNRLTKSRRAIVSDEAGTTRDRQYGKCEWNGREFSVVDTGGWVVN- 63
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+I ED I +Q A EE+ +++FLVD
Sbjct: 64 ---SDDIFED--------------------------AIRKQVIVATEEADLVLFLVDITN 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
GLT DE++A LR+ + +IL NK +S + I +EF+ LG P ISA +G+G
Sbjct: 95 GLTDWDEDVAKILRRAKLP--VILVANKADSNEQ-IYDAAEFYRLGLGDPYCISAATGSG 151
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
TG+LLD V ++ E T D+ E+ IP A+VGRPN GKSSI+NA +GEDR IV+ I+
Sbjct: 152 TGDLLDFVLQKMPASE-TNDI---EDGIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIA 207
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRD+I T + G F L+DTAGIR++ + E SV R+ RAI SDV L
Sbjct: 208 GTTRDSIYTRY-DKFGFDFYLVDTAGIRRKNKVTED---LEFYSVMRSIRAIENSDVCIL 263
Query: 464 VIEAMACITEQ 474
+++A I Q
Sbjct: 264 MLDATRGIEAQ 274
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 29/150 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT G+
Sbjct: 175 IPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYDKFGFDFYLVDTAGI- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ AIE S V I ++D
Sbjct: 234 ---RRKNKVTEDLEFYSVM-----------------------RSIRAIENSDVCILMLDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNK 312
G+ A D I ++KN K +++ VNK
Sbjct: 268 TRGIEAQDMNIFQLIQKN--SKSLVVVVNK 295
>gi|372325313|ref|ZP_09519902.1| GTP-binding protein EngA [Oenococcus kitaharae DSM 17330]
gi|366984121|gb|EHN59520.1| GTP-binding protein EngA [Oenococcus kitaharae DSM 17330]
Length = 442
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/311 (41%), Positives = 187/311 (60%), Gaps = 39/311 (12%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS LFNR+VG +AIV D GVTRDR+Y ++ W +F L+DTGG+
Sbjct: 7 IAIVGRPNVGKSTLFNRIVGSRKAIVNDISGVTRDRLYEKAEWNGVQFSLIDTGGI---- 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ ED+ + RE I+ QA AI E+ IIF+VDG +
Sbjct: 63 ----SASEDVFV-------------RE---------IKEQAELAIAEADAIIFVVDGHSS 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT D+ +A L ++ + + L VN ++ + + +F++LG P P+SA+ G G
Sbjct: 97 LTQDDQLVAKILYRS--KQKVYLVVNHLDNAEQHDY-IYDFYALGLGDPYPVSAVHGNGV 153
Query: 345 GELLDLVCSELKKVEGT-EDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
G+LLD + + K+ + + V+++++I IAI+GRPNVGKSSI N L+ ++R IVS I
Sbjct: 154 GDLLDQIIDDFKQNDDSAASPVDDDDQI-RIAIIGRPNVGKSSIFNDLIQQNRAIVSDIQ 212
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRDA+D +F +GQ+F + DTAGIRK I S TE +V RA A+ +DVV +
Sbjct: 213 GTTRDAVDAQFQDDQGQRFTITDTAGIRKSGKIIES---TEKYAVLRAQMAVEDADVVLV 269
Query: 464 VIEAMACITEQ 474
VI+A A I +Q
Sbjct: 270 VIDASAGIQDQ 280
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 32/164 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
R+AI+GRPNVGKS++FN L+ NRAIV D G TRD + + F + F + DT G+
Sbjct: 182 RIAIIGRPNVGKSSIFNDLIQQNRAIVSDIQGTTRDAVDAQ-FQDDQGQRFTITDTAGIR 240
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K I+E +T + AV R A A+E++ V++ ++D
Sbjct: 241 KSGK----IIE---------------STEKYAVLR--------AQMAVEDADVVLVVIDA 273
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
AG+ D+ IA + +I+ VNK ++ K + EF
Sbjct: 274 SAGIQDQDKHIAGLATDE--GRAVIIVVNKWDAIEKDDHSMQEF 315
>gi|330997747|ref|ZP_08321586.1| ribosome biogenesis GTPase Der [Paraprevotella xylaniphila YIT
11841]
gi|329569846|gb|EGG51604.1| ribosome biogenesis GTPase Der [Paraprevotella xylaniphila YIT
11841]
Length = 437
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 139/311 (44%), Positives = 183/311 (58%), Gaps = 43/311 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL AIV DE G TRDR YG+S W EF ++DTGG V+N
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRHAIVSDEAGTTRDRQYGKSEWTGCEFSVIDTGGWVVN- 63
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+I E+ I +Q T A EE+ V++FLVD +
Sbjct: 64 ---SDDIFEE--------------------------EIRKQVTLATEEADVVLFLVDVRN 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
G+T DE +A+ LR+ K +IL NK ++ + I +EF++LG P ISA +G+G
Sbjct: 95 GVTDLDEAVANILRRT--KKPVILVANKADT-NEWIYSAAEFYALGLGDPYCISAATGSG 151
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
TGELLD + S+ K T D +EN IP A+VGRPNVGKSS++NA +GE+R IV+ I+
Sbjct: 152 TGELLDQIVSKFPK---TIDDETDEN-IPRFAVVGRPNVGKSSLINAFIGEERNIVTDIA 207
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRD+I T +T G F L+DTAGIR++ + E SV R+ RAI SDV L
Sbjct: 208 GTTRDSIYTRYT-KFGFDFYLVDTAGIRRKNKVTED---LEYYSVMRSIRAIENSDVCIL 263
Query: 464 VIEAMACITEQ 474
+++A I Q
Sbjct: 264 MLDAERGIEAQ 274
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 29/159 (18%)
Query: 154 TIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
TI + + +PR A+VGRPNVGKS+L N +G R IV D G TRD +Y R +F
Sbjct: 166 TIDDETDENIPRFAVVGRPNVGKSSLINAFIGEERNIVTDIAGTTRDSIYTRYTKFGFDF 225
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
LVDT G+ + + + EDL + + ++ AIE S
Sbjct: 226 YLVDTAGI----RRKNKVTEDLEYYSVM-----------------------RSIRAIENS 258
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
V I ++D + G+ A D I +++N +K +++ VNK
Sbjct: 259 DVCILMLDAERGIEAQDLNIFQLIQRN--NKSLVVVVNK 295
>gi|359406189|ref|ZP_09198899.1| ribosome biogenesis GTPase Der [Prevotella stercorea DSM 18206]
gi|357556661|gb|EHJ38247.1| ribosome biogenesis GTPase Der [Prevotella stercorea DSM 18206]
Length = 437
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 138/310 (44%), Positives = 183/310 (59%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL +AIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTKTRQAIVSDTAGTTRDRQYGKCEWNGREFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I +Q A EE+ V++F+VD Q G
Sbjct: 63 KSD-DIFED--------------------------AIRKQVIVATEEADVVLFVVDVQTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT D+++A LR+ + +IL NK ++ + I +EF++LG P IS+ +G+GT
Sbjct: 96 LTDWDQDVATILRRTKLP--VILVANKTDNNDQ-IYDAAEFYALGLGEPQCISSATGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLDLV ++LK E ED+ E+ IP A+VGRPN GKSSI+NA +GEDR IV+ I+G
Sbjct: 153 GDLLDLVLTKLKP-EVKEDV---EDGIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+I T + G F L+DTAGIR++ ++ E SV R+ RAI SDV L+
Sbjct: 209 TTRDSIYTRY-DKFGFDFYLVDTAGIRRKNKVSED---LEFYSVMRSIRAIENSDVCILM 264
Query: 465 IEAMACITEQ 474
++A I Q
Sbjct: 265 LDATRGIEAQ 274
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 29/153 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT
Sbjct: 172 EDGIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYDKFGFDFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIE S V I +
Sbjct: 232 GI----RRKNKVSEDLEFYSVM-----------------------RSIRAIENSDVCILM 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
+D G+ A D I +++N +K +++ VNK
Sbjct: 265 LDATRGIEAQDMNIFQLIQRN--NKSLVVVVNK 295
>gi|297538116|ref|YP_003673885.1| ribosome-associated GTPase EngA [Methylotenera versatilis 301]
gi|297257463|gb|ADI29308.1| ribosome-associated GTPase EngA [Methylotenera versatilis 301]
Length = 484
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 130/318 (40%), Positives = 182/318 (57%), Gaps = 45/318 (14%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP V +VGRPNVGKS LFNRL A+V D PG+TRDR YGR +++VDTGG
Sbjct: 1 MLPTVVLVGRPNVGKSTLFNRLTKSRDALVADLPGLTRDRHYGRGIGASQPYLVVDTGGF 60
Query: 222 LNVSKSQPN----IMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
+PN I++ +A+ T + AI+E+ VII
Sbjct: 61 ------EPNTDSGILKAMAVQTLL---------------------------AIDEADVII 87
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPI 336
FLVDG+ G T D EIA+ LR++ ++LAVNK E K ++ +EF LG PL I
Sbjct: 88 FLVDGRQGATPQDMEIANRLRRSKCP--VLLAVNKTEGMNKAVVS-AEFHELGLGDPLSI 144
Query: 337 SAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDR 396
S+ G G +++DL +VE +L + +RIP +AIVGRPNVGKS+++NAL+GE+R
Sbjct: 145 SSAHGEGVKDIIDLALESFHEVEEEPELDQTGDRIPKVAIVGRPNVGKSTLVNALLGEER 204
Query: 397 TIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIR 456
I GTTRD+I + G+ + LIDTAG+RKR + + E SV + ++I
Sbjct: 205 VIAFDEPGTTRDSISIDLE-KNGKHYTLIDTAGVRKRGRVLEA---IEKFSVIKTIQSIE 260
Query: 457 RSDVVALVIEAMACITEQ 474
++VV LV++A ITEQ
Sbjct: 261 EANVVILVVDAQEGITEQ 278
>gi|374296822|ref|YP_005047013.1| ribosome-associated GTPase EngA [Clostridium clariflavum DSM 19732]
gi|359826316|gb|AEV69089.1| ribosome-associated GTPase EngA [Clostridium clariflavum DSM 19732]
Length = 440
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 184/312 (58%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS FN L G +IV D PGVTRDR+Y W +F L+DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTFFNYLAGKRISIVEDTPGVTRDRIYTEVEWRNRKFTLIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S+ + IM+ + + QA AIE + VIIF+VD +
Sbjct: 64 YSEDK--IMKQM---------------------------KNQAEIAIETADVIIFMVDMK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
GLTA+D E+A LRK+ K IILAVNK + + +V EF++LG L PIS+I G
Sbjct: 95 DGLTASDREVATMLRKS--KKPIILAVNKVDKVGELPAEVYEFYNLGMDNLMPISSIHGL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD E+ K E E + + +A+VG+PN GKSS++N ++GE+R IVS I
Sbjct: 153 GVGDLLD----EVFKYFPDEAEEEYDEEVIKVAVVGKPNAGKSSLINKILGEERVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT EG KF IDTAGIR+++ I + E S R++ AI R+DV
Sbjct: 209 PGTTRDAIDTYVENEEG-KFVFIDTAGIRRKSKITEN---IERYSAIRSWTAIERADVCL 264
Query: 463 LVIEAMACITEQ 474
++I+A+ +TEQ
Sbjct: 265 IMIDAVEGVTEQ 276
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 36/200 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA+VG+PN GKS+L N+++G R IV D PG TRD + E +F+ +DT G+
Sbjct: 179 KVAVVGKPNAGKSSLINKILGEERVIVSDIPGTTRDAIDTYVENEEGKFVFIDTAGIRRK 238
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK NI R +A+ ++ AIE + V + ++D
Sbjct: 239 SKITENI------------------ERYSAI---------RSWTAIERADVCLIMIDAVE 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSPL-PISA 338
G+T D +IA + + K I+ VNK + K + E+ LGF P+
Sbjct: 272 GVTEQDTKIAGYAHEQ--GKASIVVVNKWDLVEKTTGTLEEYRKTVLEKLGFMLYAPVVF 329
Query: 339 ISGTGTGELLDLVCSELKKV 358
IS TG+ +D + + +K V
Sbjct: 330 ISAK-TGQRVDKIYNLVKYV 348
>gi|429736003|ref|ZP_19269923.1| ribosome biogenesis GTPase Der [Selenomonas sp. oral taxon 138 str.
F0429]
gi|429156561|gb|EKX99190.1| ribosome biogenesis GTPase Der [Selenomonas sp. oral taxon 138 str.
F0429]
Length = 441
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 185/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMPGVTRDRIYMDAEWLNHEFTIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + + M S QA A+EE+ VI+ LVDG+
Sbjct: 61 ----------------------IEFDESDHILRSMRS----QAELAMEEADVILLLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT++DEE+A LR+ K +ILAVNK +S + + + +F++LG P+PISA +
Sbjct: 95 AGLTSSDEEVARLLRRT--KKPVILAVNKIDSFDRESL-IYDFYALGLGDPIPISASNAM 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD + + E D E + AIA+VGRPNVGKSS++N L+GE+R IVS +
Sbjct: 152 NLGDLLDAIVAAFP--EEISDGAESDE--IAIAVVGRPNVGKSSLVNRLLGEERVIVSDV 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT FT +G K+ LIDTAG+R++ I E SV R+ RAI R+ VV
Sbjct: 208 PGTTRDAIDTHFT-RDGVKYLLIDTAGMRRKGKITLP---VERYSVMRSLRAIDRAGVVL 263
Query: 463 LVIEAMACITEQ 474
+VI A I EQ
Sbjct: 264 MVINAAEGILEQ 275
>gi|288575053|ref|ZP_06393410.1| small GTP-binding protein [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570794|gb|EFC92351.1| small GTP-binding protein [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 444
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 140/310 (45%), Positives = 187/310 (60%), Gaps = 39/310 (12%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V IVGRPNVGKS+LFNRL+G RAIV D PGVTRDR+YG+ W + F LVDTGG+L
Sbjct: 4 VTIVGRPNVGKSSLFNRLIGERRAIVDDVPGVTRDRLYGQVEWRGNSFYLVDTGGLL--L 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + IME GM+G Q A+EES VI+ VDG+ G
Sbjct: 62 RDEDPIME--------GMKG-------------------QIVQAMEESDVILLSVDGREG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
LT DE+IA +RK+ K +I+ VNK + + + V E + LGF + ISAI G
Sbjct: 95 LTWMDEDIAMVIRKS-APKPVIVVVNKLDDMKFDEL-VYEAYGLGFQDVVGISAIHARGI 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
+LLD VC L + + EEE+ I +A+VGRPNVGKSSILN L+GE+R++VS + G
Sbjct: 153 DDLLDRVCELLPE---DDRFFEEEDEIK-VALVGRPNVGKSSILNRLLGENRSLVSDVPG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+ID+ +G+K RLIDTAG+R+++ E S R +I RSDV LV
Sbjct: 209 TTRDSIDSLMELDDGRKLRLIDTAGLRRKSRFKDD---IEYYSFVRTMESIDRSDVSILV 265
Query: 465 IEAMACITEQ 474
++A+ +T+Q
Sbjct: 266 VDAVEGVTDQ 275
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 30/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+VA+VGRPNVGKS++ NRL+G NR++V D PG TRD + + + L+DT G+
Sbjct: 177 KVALVGRPNVGKSSILNRLLGENRSLVSDVPGTTRDSIDSLMELDDGRKLRLIDTAGLRR 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S+ + +I E + T+ +I+ S V I +VD
Sbjct: 237 KSRFKDDI-EYYSFVRTM--------------------------ESIDRSDVSILVVDAV 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+T D+++A + + K I+L +NK +
Sbjct: 270 EGVTDQDKKLASSIVER--GKGIVLVMNKWD 298
>gi|331269697|ref|YP_004396189.1| small GTP-binding protein [Clostridium botulinum BKT015925]
gi|329126247|gb|AEB76192.1| small GTP-binding protein [Clostridium botulinum BKT015925]
Length = 438
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 185/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y ++ W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVDDMPGVTRDRIYAQAEWLNNKFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + + VA+M RQA AIE + V++F+VDG+
Sbjct: 62 ----EPE-------------------SEDVIVAQM----RRQAQMAIEMADVVLFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD E+A LRK +K I+LAVNK + + + EF++LG P+ IS+ G
Sbjct: 95 QGLADADREVAQMLRK--ANKSIVLAVNKIDRHQLD-DNIYEFYNLGLGDPMAISSSQGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + V ED +EEN IA+VGRPNVGKSS++N ++GE++ IVS I
Sbjct: 152 GLGDLLDEVVDKFPSV--NED--DEENEYIRIAMVGRPNVGKSSLINRILGEEKHIVSNI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD++D+ EG KF LIDTAG+R+++ I E S R +I +DV
Sbjct: 208 PGTTRDSVDSYIEREEG-KFALIDTAGLRRKSKIKEQ---VERYSAVRTIASIENADVCI 263
Query: 463 LVIEAMACITEQ 474
L+++A I EQ
Sbjct: 264 LMLDAEQGIAEQ 275
>gi|326336190|ref|ZP_08202362.1| ribosome-associated GTPase EngA [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325691699|gb|EGD33666.1| ribosome-associated GTPase EngA [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 434
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 135/303 (44%), Positives = 181/303 (59%), Gaps = 42/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRLV AIV GVTRDR YG++ W +F ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLVQRREAIVDSISGVTRDRHYGKTDWNGRDFSVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
G + +E I++Q AIEE+ IIFL D ++G
Sbjct: 62 -----------------AGGDDVFQKE---------IDKQVNLAIEEADAIIFLTDVESG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+ + DEEIA LR++ F LAVNK ++ ++ M +EF++LGF L PIS+++G+GT
Sbjct: 96 IMSTDEEIAQLLRRSKKPTF--LAVNKVDNTKRA-MDANEFYALGFEELFPISSVNGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GELLD V L + E E E +P A+VGRPN GKSS +NAL+GE+R IV+ I+G
Sbjct: 153 GELLDAVVKVLPEEEKEE-----ETTLPRFAVVGRPNAGKSSFINALIGEERYIVTDIAG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT + G +F L+DTAGIR++A + E SV R+ RAI SDV L+
Sbjct: 208 TTRDAIDTRY-NRFGFEFNLVDTAGIRRKAKVKED---LEFYSVMRSVRAIEHSDVCLLL 263
Query: 465 IEA 467
++A
Sbjct: 264 VDA 266
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 71/164 (43%), Gaps = 29/164 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G R IV D G TRD + R EF LVDT G+
Sbjct: 174 LPRFAVVGRPNAGKSSFINALIGEERYIVTDIAGTTRDAIDTRYNRFGFEFNLVDTAGI- 232
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ AIE S V + LVD
Sbjct: 233 ---RRKAKVKEDLEFYSVM-----------------------RSVRAIEHSDVCLLLVDA 266
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G D I WL + K +++ VNK + K F
Sbjct: 267 TRGFEGQDANIF-WLAQR-NKKGVVILVNKWDLVEKDTHTTKHF 308
>gi|334127957|ref|ZP_08501859.1| ribosome-associated GTPase EngA [Centipeda periodontii DSM 2778]
gi|333388678|gb|EGK59852.1| ribosome-associated GTPase EngA [Centipeda periodontii DSM 2778]
Length = 447
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 184/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG
Sbjct: 10 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMPGVTRDRIYMDAEWLNHEFTIIDTGG--- 66
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + + M S QA A+EE+ VI+FLVDG+
Sbjct: 67 ----------------------IEFDESDHILRSMRS----QAELAMEEADVILFLVDGR 100
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT++DEE+ LR+ K +ILAVNK +S + + + +F+SLG P+PISA +
Sbjct: 101 AGLTSSDEEVGRLLRRT--QKPVILAVNKIDSFDREAL-IYDFYSLGLGDPIPISASNAM 157
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD + + + G E + I AIA+VGRPNVGKSS++N L+GE+R IVS +
Sbjct: 158 NLGDLLDAIVASFPEDTGEG---AESDEI-AIAVVGRPNVGKSSLVNRLLGEERVIVSDM 213
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F +G + LIDTAG+R++ I E SV R+ RAI R+ VV
Sbjct: 214 PGTTRDAIDTHFV-RDGANYLLIDTAGMRRKGKITLP---VERYSVMRSLRAIDRAAVVV 269
Query: 463 LVIEAMACITEQ 474
+VI A I EQ
Sbjct: 270 MVINAAEGILEQ 281
>gi|305666364|ref|YP_003862651.1| GTP-binding protein EngA [Maribacter sp. HTCC2170]
gi|88708356|gb|EAR00593.1| GTP-binding protein EngA [Maribacter sp. HTCC2170]
Length = 496
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 132/303 (43%), Positives = 182/303 (60%), Gaps = 43/303 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W EF ++DTGG +
Sbjct: 67 VAIVGRPNVGKSTFFNRLIQRREAIVDAVSGVTRDRHYGKSDWNGKEFSIIDTGGYV--- 123
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G + I I++Q AIEE+ +IF+VD + G
Sbjct: 124 ---------------VGSDDI-----------FEQEIDKQVELAIEEADALIFMVDVETG 157
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T DE++A L K ++K + LAVNK ++ ++ V EF+SLG +S+I+G+GT
Sbjct: 158 VTGMDEDVAKILHK--VNKPVFLAVNKVDNAKRAEDAV-EFYSLGLGEYYNLSSINGSGT 214
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GELLD + VE D VEEE+ +P A+VGRPN GKSS +NAL+GE+R IV+ I+G
Sbjct: 215 GELLDAL------VEMLPDNVEEESDLPRFAVVGRPNAGKSSFINALIGEERYIVTDIAG 268
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+IDT++ G +F L+DTAGIR+++ + E SV R+ RAI SDV L+
Sbjct: 269 TTRDSIDTKYN-RFGFEFNLVDTAGIRRKSKVKED---LEFYSVMRSVRAIEHSDVCLLL 324
Query: 465 IEA 467
++A
Sbjct: 325 LDA 327
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 69/152 (45%), Gaps = 29/152 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G R IV D G TRD + + EF LVDT G+
Sbjct: 235 LPRFAVVGRPNAGKSSFINALIGEERYIVTDIAGTTRDSIDTKYNRFGFEFNLVDTAGIR 294
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
SK + EDL + + ++ AIE S V + L+D
Sbjct: 295 RKSK----VKEDLEFYSVM-----------------------RSVRAIEHSDVCLLLLDA 327
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G I WL + +K I++ VNK +
Sbjct: 328 TRGFDGQVSNIF-WLAQR-NNKGIVILVNKWD 357
>gi|343521005|ref|ZP_08757973.1| ribosome-associated GTPase EngA [Parvimonas sp. oral taxon 393 str.
F0440]
gi|343396211|gb|EGV08748.1| ribosome-associated GTPase EngA [Parvimonas sp. oral taxon 393 str.
F0440]
Length = 441
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/312 (41%), Positives = 184/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P V +VGRPNVGKS LFN+L+ AI D PGVTRDR+Y + W F+L DTGG+
Sbjct: 4 PLVCVVGRPNVGKSTLFNKLINKRIAITEDTPGVTRDRLYQDAEWQNKHFILCDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+PN +D+ + I+ QA A+E + VI+F+VDG+
Sbjct: 62 ----EPN-SDDIIL----------------------QKIKAQADVAMENADVILFVVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPI-SAISGT 342
GL D EI+++LR+ K IILAVNK ++ K M+V EF+ LG+ L I SA G
Sbjct: 95 NGLMDEDREISNYLRRT--KKPIILAVNKIDT-HKTPMEVYEFYELGYEKLNIISATQGF 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + E + + T EE+ + IA++G+PNVGKSS++N ++GE+R IVS I
Sbjct: 152 GLGDLLDEIIKEFPENKYTG----EEDEVTKIALIGKPNVGKSSLMNRILGEERMIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+ID+ +G+ + DTAG+R++ I + E SV R A+ RSD+
Sbjct: 208 AGTTRDSIDSR-VEIDGKTYIFTDTAGLRRKKNITEN---LERYSVVRTLNAVERSDIAI 263
Query: 463 LVIEAMACITEQ 474
L+I+A +TEQ
Sbjct: 264 LLIDATEGVTEQ 275
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E + ++A++G+PNVGKS+L NR++G R IV D G TRD + R ++ DT
Sbjct: 173 EDEVTKIALIGKPNVGKSSLMNRILGEERMIVSDIAGTTRDSIDSRVEIDGKTYIFTDTA 232
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + NI E+L +V R + +ER S + I L
Sbjct: 233 GL----RRKKNITENL---------------ERYSVVRTLNAVER--------SDIAILL 265
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSPL 334
+D G+T D ++ + ++ +K +I+AVNK + K F L F P
Sbjct: 266 IDATEGVTEQDTKVIGFAKE--QNKALIIAVNKWDLIVKDNKTYKAFEDDIRTKLSFVPY 323
Query: 335 PISAISGTGTGELLDLVCSELK 356
TG+ +D + +K
Sbjct: 324 AQLVFISVKTGQRIDKLFEAIK 345
>gi|452126153|ref|ZP_21938736.1| GTP-binding protein Der [Bordetella holmesii F627]
gi|452129521|ref|ZP_21942096.1| GTP-binding protein Der [Bordetella holmesii H558]
gi|451921248|gb|EMD71393.1| GTP-binding protein Der [Bordetella holmesii F627]
gi|451923156|gb|EMD73298.1| GTP-binding protein Der [Bordetella holmesii H558]
Length = 451
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/315 (42%), Positives = 187/315 (59%), Gaps = 40/315 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL A+V D G+TRDR YG G+ F+++DTGG
Sbjct: 5 PVVALVGRPNVGKSTLFNRLTRSRAALVADYSGLTRDRHYGEGRVGDIPFIVIDTGGFEP 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K I+ ++A RQ AI E+ V++FLVD +
Sbjct: 65 VAKD--GILAEMA---------------------------RQTRQAIAEADVVVFLVDAR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGL A D EIA LRK+ + ++LAVNK E +G +SEF+ LG P PISA G
Sbjct: 96 AGLNAHDHEIARLLRKSGQQR-VLLAVNKAEGMNEG-KAISEFYELGLGEPHPISAAHGD 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEE---ENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G G+L+++ +L E + E+ E+RI +AIVGRPNVGKS+++N L+GE+R I
Sbjct: 154 GIGDLIEVALQDLAAPEEEVEPSEQDGVEHRI-KLAIVGRPNVGKSTLINTLMGEERVIA 212
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
+ GTTRDAI+ +F +G+K+ LIDTAG+RKR + + E SV + +AI S+
Sbjct: 213 FDLPGTTRDAIEIDFE-RDGRKYTLIDTAGLRKRGKVFEA---VEKFSVIKTLQAIEASN 268
Query: 460 VVALVIEAMACITEQ 474
VV L+++A + I+EQ
Sbjct: 269 VVLLMLDAQSEISEQ 283
>gi|342218626|ref|ZP_08711236.1| ribosome biogenesis GTPase Der [Megasphaera sp. UPII 135-E]
gi|341589496|gb|EGS32771.1| ribosome biogenesis GTPase Der [Megasphaera sp. UPII 135-E]
Length = 443
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 183/312 (58%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W HEF ++DTGG+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVKKRISIVEDIPGVTRDRIYFDAEWLGHEFTMIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V + + + S + QA AI E+ VI+F+VDG+
Sbjct: 64 VDEKE----------------------------HIFSSMRYQAELAIREADVILFVVDGK 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ DEE+A LR + K +IL VNK +S + M + EF+ LG P+ +SAI+
Sbjct: 96 TGIQPQDEEVATILRTS--GKPVILVVNKIDSVEQE-MNMYEFYGLGIGDPIGVSAINLM 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V ++ G ED + + IA+VGRPNVGKSS+ NAL+G++R IVS +
Sbjct: 153 NLGDLLDEVLKHIQTNPGEED----GDDVIHIALVGRPNVGKSSMTNALLGQERVIVSNV 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD+IDT ++ EG F LIDTAG+R++A + E SV RA RA+ RSDV
Sbjct: 209 PGTTRDSIDTHWS-YEGTPFVLIDTAGMRRKAKVDIP---VERYSVVRALRAVDRSDVAV 264
Query: 463 LVIEAMACITEQ 474
L+++ +TEQ
Sbjct: 265 LMLDGTEGVTEQ 276
>gi|170760623|ref|YP_001787836.1| GTP-binding protein EngA [Clostridium botulinum A3 str. Loch Maree]
gi|238688523|sp|B1KX71.1|DER_CLOBM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|169407612|gb|ACA56023.1| ribosome-associated GTPase EngA [Clostridium botulinum A3 str. Loch
Maree]
Length = 439
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 183/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + S + RQA AIE + VIIFLVDG+
Sbjct: 62 ----EPE-SEDIIV----------------------SQMRRQAQIAIEMANVIIFLVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL ADEE+A LRK+ K ++L VNK + K EF++LG P+ IS+
Sbjct: 95 EGLAPADEEVAQMLRKS--KKPVVLVVNKIDK-LKDENNAYEFYNLGIGDPVTISSSQAL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V K E + E N IA +G+PNVGKSS++N L+GE+R IVS I
Sbjct: 152 GLGDMLDRVVEYFKDDESDGEDDERIN----IAFIGKPNVGKSSLINKLLGEERLIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD+ID+ + E +F LIDTAG+R+++ + E SV R + +I R+DV
Sbjct: 208 PGTTRDSIDS-YVDTEFGEFTLIDTAGLRRKSKVKEE---IERYSVIRTYASIERADVCI 263
Query: 463 LVIEAMACITEQ 474
L+I+A+ I+EQ
Sbjct: 264 LMIDAIEGISEQ 275
>gi|240146998|ref|ZP_04745599.1| ribosome-associated GTPase EngA [Roseburia intestinalis L1-82]
gi|257200843|gb|EEU99127.1| ribosome-associated GTPase EngA [Roseburia intestinalis L1-82]
gi|291535193|emb|CBL08305.1| ribosome-associated GTPase EngA [Roseburia intestinalis M50/1]
gi|291539724|emb|CBL12835.1| ribosome-associated GTPase EngA [Roseburia intestinalis XB6B4]
Length = 441
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 180/312 (57%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W ++ F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAGERISIVKDTPGVTRDRIYADVTWLDYHFTMIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK D+ + S + QA AI + VIIFL D +
Sbjct: 64 DSK-------DIIL----------------------SQMREQAEIAIATADVIIFLTDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR++ K ++L VNK +S K + V EF++LG P PISA S
Sbjct: 95 QGLQDSDSKVADMLRRS--GKPVVLVVNKVDSFEKFMPDVYEFYNLGIGDPYPISASSML 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V E +D E+E P +AI+G+PNVGKSS++N L EDR IVS I
Sbjct: 153 GLGDMLDEVVKNFP--EYNKDEAEDER--PKVAIIGKPNVGKSSLINKLAQEDRVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT+ G+++ IDTAG+R++ I E S+ RA A+ R+DV
Sbjct: 209 AGTTRDAIDTDIR-YNGKEYVFIDTAGLRRKNKIKEE---IERYSIIRAVTAVERADVCI 264
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 265 IVIDATEGVTEQ 276
>gi|395216003|ref|ZP_10401131.1| ribosome-associated GTPase EngA [Pontibacter sp. BAB1700]
gi|394455597|gb|EJF10048.1| ribosome-associated GTPase EngA [Pontibacter sp. BAB1700]
Length = 437
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 132/311 (42%), Positives = 189/311 (60%), Gaps = 42/311 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS LFNRLVG +AI+ +E GVTRDR YG W + ++DTGG ++ S
Sbjct: 6 IAIVGRPNVGKSTLFNRLVGRRQAIMDNESGVTRDRSYGHGDWTGKYYTVIDTGGYVHGS 65
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+D+ EG I +Q AI+E+ VI+F+VD +AG
Sbjct: 66 -------DDI-------FEG---------------EINKQVELAIKEADVILFMVDVEAG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS--PLPISAISGTG 343
LT DEE A+ LR++ DK I + NK ++ + Q+ EF++LG PIS+ SG+G
Sbjct: 97 LTGLDEEFANVLRRS--DKPIYVVANKADTNARA-HQMGEFYALGLGIDIFPISSQSGSG 153
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
TGELLD V K EGTED + IP +A++GRPNVGKSS +N L+G +R IV+ I+
Sbjct: 154 TGELLDEVVKHF-KTEGTED---PDAGIPRLAVLGRPNVGKSSFVNMLLGVERNIVTDIA 209
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRDAID+ + G++F ++DTAG+R+++ ++ E SV R+ RA+ +DV +
Sbjct: 210 GTTRDAIDSRYNA-FGKEFIIVDTAGLRRKSKVSED---IEFYSVMRSVRALEDADVCIV 265
Query: 464 VIEAMACITEQ 474
+++A I Q
Sbjct: 266 MLDATRGIESQ 276
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 29/168 (17%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P+ +PR+A++GRPNVGKS+ N L+G R IV D G TRD + R EF++VDT
Sbjct: 173 PDAGIPRLAVLGRPNVGKSSFVNMLLGVERNIVTDIAGTTRDAIDSRYNAFGKEFIIVDT 232
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ SK + ED+ + + ++ A+E++ V I
Sbjct: 233 AGLRRKSK----VSEDIEFYSVM-----------------------RSVRALEDADVCIV 265
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
++D G+ + D I KN K I++ VNK + K EF
Sbjct: 266 MLDATRGIESQDVNIISLAEKN--RKGIVILVNKWDLVEKETNTTKEF 311
>gi|424842166|ref|ZP_18266791.1| ribosome-associated GTPase EngA [Saprospira grandis DSM 2844]
gi|395320364|gb|EJF53285.1| ribosome-associated GTPase EngA [Saprospira grandis DSM 2844]
Length = 433
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/310 (40%), Positives = 184/310 (59%), Gaps = 43/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+GRPNVGKS FNR++G +AIV D GVTRDR YG + W F LVDTGG +
Sbjct: 5 VAIIGRPNVGKSTFFNRMLGMRQAIVDDVSGVTRDRQYGSTEWNGKRFHLVDTGGFIGDG 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
ED+ + I +Q AIEE+ V++F+VD + G
Sbjct: 65 -------EDV----------------------FAAAIRKQVRMAIEEAQVVVFMVDVETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T D ++ L++ + K ++LAVNK ++ + +M + EFW++GF L PIS+ SG+GT
Sbjct: 96 ITDLDAQVGRLLKE--ISKPVLLAVNKVDNNERQLM-IHEFWAMGFDNLYPISSTSGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD + + + EE+NR+P IAIVGRPN GKSS +N L+ E+R+IV+ I+G
Sbjct: 153 GDLLDALTDIIPGIP------EEDNRLPHIAIVGRPNAGKSSFVNLLLDEERSIVTDIAG 206
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD++ + GQ+F L+DTAG+R++ ++ E SV RA R++ +D+ L+
Sbjct: 207 TTRDSVHAHYN-KFGQEFILVDTAGLRRKRSVKED---LEFYSVLRAIRSLESADICVLM 262
Query: 465 IEAMACITEQ 474
++A I Q
Sbjct: 263 LDASKGIEAQ 272
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 37/194 (19%)
Query: 155 IGNVPE--HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
I +PE + LP +AIVGRPN GKS+ N L+ R+IV D G TRD ++ E
Sbjct: 163 IPGIPEEDNRLPHIAIVGRPNAGKSSFVNLLLDEERSIVTDIAGTTRDSVHAHYNKFGQE 222
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F+LVDT G+ + + ++ EDL + + +A ++E
Sbjct: 223 FILVDTAGL----RRKRSVKEDLEFYSVL-----------------------RAIRSLES 255
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS---- 328
+ + + ++D G+ A D I KN +K I++ VNK + K + E+
Sbjct: 256 ADICVLMLDASKGIEAQDLNIFRLAIKN--NKGIVIFVNKWDLVEKSTNTLKEYEDHIRE 313
Query: 329 --LGFSPLPISAIS 340
FS +PI IS
Sbjct: 314 RIAPFSDVPIVFIS 327
>gi|392389910|ref|YP_006426513.1| ribosome-associated GTPase EngA [Ornithobacterium rhinotracheale
DSM 15997]
gi|390520988|gb|AFL96719.1| ribosome-associated GTPase EngA [Ornithobacterium rhinotracheale
DSM 15997]
Length = 436
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/310 (44%), Positives = 175/310 (56%), Gaps = 40/310 (12%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL+ AIV GVTRDR YG+S W EF ++DTGG + S
Sbjct: 5 VAIVGRPNVGKSTLFNRLLQRREAIVDSVSGVTRDRHYGKSDWNGKEFTVIDTGGYIEGS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EG I +Q AIEE+ +I+F+VD Q G
Sbjct: 65 DD--------------AFEG---------------EIRKQVELAIEEASIIVFVVDNQIG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T D+ +A L++ DK + LAVNK +S K IM EF+ LGF ISA SG GT
Sbjct: 96 VTDMDKRVALLLQQT-TDKPVFLAVNKVDS-NKNIMDAVEFYELGFEKYYTISAASGGGT 153
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD + L E + +P I I GRPNVGKS+ NAL+GE+R IV+ I+G
Sbjct: 154 GDLLDAIVEALPNDEHKDPF----EGLPKITIAGRPNVGKSTFTNALLGEERNIVTDIAG 209
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+I+T ++ GQ+F LIDTAG+RK+ + E SV R+ RAI DVV L+
Sbjct: 210 TTRDSIETLYS-KFGQEFVLIDTAGMRKKNKVEED---LEFYSVMRSIRAIEDCDVVILM 265
Query: 465 IEAMACITEQ 474
I+A I Q
Sbjct: 266 IDAERGIESQ 275
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 35/189 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P LP++ I GRPNVGKS N L+G R IV D G TRD + EF+L+DT
Sbjct: 172 PFEGLPKITIAGRPNVGKSTFTNALLGEERNIVTDIAGTTRDSIETLYSKFGQEFVLIDT 231
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + + EDL + + ++ AIE+ V+I
Sbjct: 232 AGM----RKKNKVEEDLEFYSVM-----------------------RSIRAIEDCDVVIL 264
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------LGFS 332
++D + G+ + D +I + +KN K I++ VNK ++ K + E + F+
Sbjct: 265 MIDAERGIESQDMKIFNLAQKN--RKGILILVNKWDAVEKETNTMKEMEAAIKLRIAPFT 322
Query: 333 PLPISAISG 341
+PI IS
Sbjct: 323 DVPILFISA 331
>gi|312898938|ref|ZP_07758326.1| ribosome-associated GTPase EngA [Megasphaera micronuciformis F0359]
gi|310620100|gb|EFQ03672.1| ribosome-associated GTPase EngA [Megasphaera micronuciformis F0359]
Length = 442
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 185/312 (59%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W EF L+DTGG+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVKKRISIVEDLPGVTRDRIYFDAEWLGREFTLIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V S NI + + QA AI E+ VI+++VDG+
Sbjct: 64 VD-SDNNIF---------------------------TSMRYQAELAIHEADVILYVVDGK 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ D+EIA LR + K +IL VNK +S + + + EF+ LG P+ +SA++
Sbjct: 96 TGIQPQDQEIAAMLRAS--GKPVILVVNKIDSVEQEV-NIYEFYGLGLGDPIGVSAVNLM 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V S +K+V ED + + IA+VGRPNVGKSS+ NAL+G++R IVS +
Sbjct: 153 NLGDLLDEVLSHIKEVPVQED----DESVVHIALVGRPNVGKSSLTNALLGKERVIVSDM 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+IDT + +G +F LIDTAG+R++ I E SV RA RAI RSDV
Sbjct: 209 AGTTRDSIDTHWKH-DGTEFVLIDTAGMRRKGKIDLP---VERYSVVRALRAIDRSDVAV 264
Query: 463 LVIEAMACITEQ 474
LV++ + +TEQ
Sbjct: 265 LVLDGVEGVTEQ 276
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 74/152 (48%), Gaps = 33/152 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH--EFMLVDTGGVL 222
+A+VGRPNVGKS+L N L+G R IV D G TRD + + W EF+L+DT G+
Sbjct: 179 HIALVGRPNVGKSSLTNALLGKERVIVSDMAGTTRDSI--DTHWKHDGTEFVLIDTAGMR 236
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K I L +V R A AI+ S V + ++DG
Sbjct: 237 RKGK-------------------IDLPVERYSVVR--------ALRAIDRSDVAVLVLDG 269
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+T D++IA ++ ++ K I+ VNK +
Sbjct: 270 VEGVTEQDKKIAGYIHES--GKGCIIIVNKWD 299
>gi|293115597|ref|ZP_05792245.2| ribosome-associated GTPase EngA [Butyrivibrio crossotus DSM 2876]
gi|292809015|gb|EFF68220.1| ribosome-associated GTPase EngA [Butyrivibrio crossotus DSM 2876]
Length = 446
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 181/312 (58%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 9 PVVAIVGRPNVGKSTLFNALAGEQISIVKDTPGVTRDRIYADVTWLNYNFTLIDTGGIEP 68
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK D+ + S + QA AI + VIIF+VD +
Sbjct: 69 ESK-------DIIL----------------------SQMREQAEIAIASADVIIFMVDVR 99
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++A+ LR++ K ++L VNK +S +K + V EF++LG P+P+S++
Sbjct: 100 QGLVDSDSKVANMLRRS--GKPVVLVVNKVDSFQKMMTDVYEFYNLGIGDPVPVSSVGKL 157
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + ++ E P IAIVG+PNVGKSSI+N +VGE R IVS I
Sbjct: 158 GIGDMLDEVVKHFPESAAEDEEDER----PRIAIVGKPNVGKSSIINKIVGESRVIVSDI 213
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT+ T G ++ IDTAG+R++ I E S+ R A+ R+DVV
Sbjct: 214 AGTTRDAIDTDIT-YNGNEYVFIDTAGLRRKNKIKEE---LERYSIIRTVTAVERADVVL 269
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 270 VVIDATEGVTEQ 281
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVG+PNVGKS++ N++VG +R IV D G TRD + + +E++ +DT G+
Sbjct: 183 PRIAIVGKPNVGKSSIINKIVGESRVIVSDIAGTTRDAIDTDITYNGNEYVFIDTAGL-- 240
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E+L + I + A+E + V++ ++D
Sbjct: 241 --RRKNKIKEELERYSII-----------------------RTVTAVERADVVLVVIDAT 275
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP----L 334
G+T D +IA + K II+ VNK ++ K + E + L F P L
Sbjct: 276 EGVTEQDAKIAGIAHER--GKGIIVVVNKWDAIEKNDKTIYEHTNRIKDILSFMPYAEIL 333
Query: 335 PISAISGTGTGELLDLV 351
ISA +G G++ D +
Sbjct: 334 FISAKTGQRVGKIFDTI 350
>gi|339628052|ref|YP_004719695.1| ribosome-associated GTPase EngA [Sulfobacillus acidophilus TPY]
gi|379007685|ref|YP_005257136.1| GTP-binding protein engA [Sulfobacillus acidophilus DSM 10332]
gi|339285841|gb|AEJ39952.1| ribosome-associated GTPase EngA [Sulfobacillus acidophilus TPY]
gi|361053947|gb|AEW05464.1| GTP-binding protein engA [Sulfobacillus acidophilus DSM 10332]
Length = 438
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/313 (43%), Positives = 185/313 (59%), Gaps = 42/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P VA+VGRPNVGKSALFNR+ RAIV D GVTRDR+Y + W F +VDTGG
Sbjct: 1 MPIVALVGRPNVGKSALFNRITESRRAIVEDFEGVTRDRLYQETDWNGRTFTMVDTGG-- 58
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I ED T+E+ + +M Q AI+E+ V++F+VDG
Sbjct: 59 --------IWED---------------TQESLL----TMTREQTEQAIQEADVLVFVVDG 91
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG+TAAD+++AD LR++ K +ILAVNK E G + EF+ LGF PL +SA+ G
Sbjct: 92 QAGVTAADQDVADRLRRS--RKPVILAVNKAE----GKPLLGEFYQLGFGEPLLVSAVHG 145
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G G+LLD + L TE E IAI GRPNVGKSS+LN + G +RT+V+P
Sbjct: 146 QGIGDLLDRIVDNLPDSPPTE--ASPETAPVRIAIAGRPNVGKSSLLNWISGTERTLVTP 203
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRD +D+ +G+ + +DTAG+R+ + I + E +V R+ AIR +DVV
Sbjct: 204 IAGTTRDVVDS-LVEHDGRSYLFLDTAGLRRPSRIDEA---LEQKTVQRSLAAIREADVV 259
Query: 462 ALVIEAMACITEQ 474
L++ A + Q
Sbjct: 260 LLMLNAAEGLLGQ 272
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 35/189 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE R+AI GRPNVGKS+L N + G R +V G TRD + ++ +DT
Sbjct: 169 PETAPVRIAIAGRPNVGKSSLLNWISGTERTLVTPIAGTTRDVVDSLVEHDGRSYLFLDT 228
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ S+ I A + V R + AAI E+ V++
Sbjct: 229 AGLRRPSR-------------------IDEALEQKTVQR--------SLAAIREADVVLL 261
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI--MQVSEFWSLGF----S 332
+++ GL D+ IA + ++ ++L NK + + +Q L F +
Sbjct: 262 MLNAAEGLLGQDQRIAGQIATHHKAAVVLL--NKADLVKGSTVPLQTRVKEQLPFLSYAT 319
Query: 333 PLPISAISG 341
LPIS ++G
Sbjct: 320 VLPISVLTG 328
>gi|295132650|ref|YP_003583326.1| GTP-binding protein EngA [Zunongwangia profunda SM-A87]
gi|294980665|gb|ADF51130.1| GTP-binding protein EngA [Zunongwangia profunda SM-A87]
Length = 434
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/303 (42%), Positives = 182/303 (60%), Gaps = 42/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W F L+DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRREAIVDSVSGVTRDRHYGKSDWNGRNFSLIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
IG + + + I++Q AI E+ IIF+VD ++G
Sbjct: 62 ---------------IGSDDV-----------FEAEIDKQVELAIGEADAIIFMVDVESG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T DE++A LRK ++K + LAVNK ++ ++ + EF++LG PI++ +G+GT
Sbjct: 96 ITPMDEDVAILLRK--VNKPVFLAVNKVDNNKR-LENAVEFYALGLGEYFPIASTNGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V L E+ +EE+ +P A+VGRPN GKSS +NAL+GEDR IV+ I+G
Sbjct: 153 GDLLDAVIESL-----PEETYKEESELPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+IDT++ G +F L+DTAGIR+++ + E SV R+ RAI +DV LV
Sbjct: 208 TTRDSIDTKYNR-FGFEFNLVDTAGIRRKSKVKED---LEFYSVMRSVRAIENADVCLLV 263
Query: 465 IEA 467
++A
Sbjct: 264 LDA 266
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E LPR A+VGRPN GKS+ N L+G +R IV D G TRD + + EF LVDT
Sbjct: 171 ESELPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDSIDTKYNRFGFEFNLVDTA 230
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ SK + EDL + + ++ AIE + V + +
Sbjct: 231 GIRRKSK----VKEDLEFYSVM-----------------------RSVRAIENADVCLLV 263
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
+D G + I WL + K I++ VNK
Sbjct: 264 LDATRGFDGQVQNIF-WLAQRNR-KGIVILVNK 294
>gi|160915095|ref|ZP_02077308.1| hypothetical protein EUBDOL_01103 [Eubacterium dolichum DSM 3991]
gi|158432894|gb|EDP11183.1| ribosome biogenesis GTPase Der [Eubacterium dolichum DSM 3991]
Length = 436
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 177/312 (56%), Gaps = 47/312 (15%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNR++G ++IV D PGVTRDR+YG++ W EF L+DTGG+
Sbjct: 6 VAIVGRPNVGKSTIFNRIIGERKSIVEDTPGVTRDRIYGKAEWLTKEFRLIDTGGIQ--- 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ED I M Q AIEE+ I+F+V G+ G
Sbjct: 63 ------LEDQDFQQEIQM---------------------QVEIAIEEADAIVFVVSGREG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKC--ESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+T DE IA L+K +K IILAVNK ES + I EF+ LG P+ +S G
Sbjct: 96 VTRDDEYIARLLQKT--NKKIILAVNKIDDESLQPSIY---EFYQLGVGDPIAVSGSHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD + K E + ++GRPNVGKSS++NA++ +DR IVS I
Sbjct: 151 GIGDILDEIVHSFPK-----KAFNEYEGMTRFCLIGRPNVGKSSLVNAILDQDRVIVSNI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT FT EG+ + +IDTAGIR+R + + E SV RA AI RSDVV
Sbjct: 206 EGTTRDAIDTPFT-REGKDYVVIDTAGIRRRGKVYEN---IEKYSVLRAMSAIERSDVVL 261
Query: 463 LVIEAMACITEQ 474
+VI+ I EQ
Sbjct: 262 VVIDGETGIREQ 273
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 38/198 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+ R ++GRPNVGKS+L N ++ +R IV + G TRD + +++++DT G+
Sbjct: 174 MTRFCLIGRPNVGKSSLVNAILDQDRVIVSNIEGTTRDAIDTPFTREGKDYVVIDTAGIR 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K NI + +V R A +AIE S V++ ++DG
Sbjct: 234 RRGKVYENI-------------------EKYSVLR--------AMSAIERSDVVLVVIDG 266
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQV-----SEFWSLGFSPL 334
+ G+ D+ +A + + K +I+ NK E + ++++ + F L ++P+
Sbjct: 267 ETGIREQDKHVAGYAHE--AGKGVIIVYNKWDAVEKDERTMVKIEKEIYAHFLYLNYAPI 324
Query: 335 P-ISAISGTGTGELLDLV 351
+SA+ LL ++
Sbjct: 325 VFVSALKKQRIHTLLPMI 342
>gi|257791089|ref|YP_003181695.1| small GTP-binding protein [Eggerthella lenta DSM 2243]
gi|317488189|ref|ZP_07946760.1| ribosome-associated GTPase EngA [Eggerthella sp. 1_3_56FAA]
gi|325830789|ref|ZP_08164173.1| ribosome biogenesis GTPase Der [Eggerthella sp. HGA1]
gi|257474986|gb|ACV55306.1| small GTP-binding protein [Eggerthella lenta DSM 2243]
gi|316912694|gb|EFV34232.1| ribosome-associated GTPase EngA [Eggerthella sp. 1_3_56FAA]
gi|325487196|gb|EGC89639.1| ribosome biogenesis GTPase Der [Eggerthella sp. HGA1]
Length = 438
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/313 (42%), Positives = 182/313 (58%), Gaps = 39/313 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS NR+ + AIV + GVTRDR Y + W +F L+DTGG+
Sbjct: 3 LPIVAVVGRPNVGKSTFVNRIAQADEAIVHEMRGVTRDRSYHEADWNGVDFKLIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D A +I QA A E+ VI+FLVDG
Sbjct: 62 -------EMGDDDAFQGSI---------------------RNQALAGANEADVILFLVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+ A DE +A LRK K + L VNK ++P + + +V EF+ LG P P+SA+ G
Sbjct: 94 KTGVNADDEAVARILRKT--SKPVFLVVNKLDTPNR-MDEVWEFYQLGLGDPWPVSAMHG 150
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG+LLD V +ELKKV+ D EE+ +AI+GRPN GKSS+ N L DR+IVS
Sbjct: 151 HGTGDLLDEVVNELKKVDLPADADEEDG--INVAIIGRPNAGKSSLTNKLTANDRSIVSD 208
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT +GQ++ ++DTAG+R+++ I E RA RAI R++V
Sbjct: 209 VAGTTRDAIDTHIV-HDGQRYTIVDTAGLRRKSQIDED---VEYYGFVRAMRAIDRANVA 264
Query: 462 ALVIEAMACITEQ 474
LVI++ +T+Q
Sbjct: 265 LLVIDSTLGLTDQ 277
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 41/206 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+GRPN GKS+L N+L +R+IV D G TRD + + +VDT G+
Sbjct: 181 VAIIGRPNAGKSSLTNKLTANDRSIVSDVAGTTRDAIDTHIVHDGQRYTIVDTAGL---- 236
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + I ED+ + +A AI+ + V + ++D G
Sbjct: 237 RRKSQIDEDVEYYGFV-----------------------RAMRAIDRANVALLVIDSTLG 273
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNK---CESP------RKGIMQVSEFWSLGFSP-LP 335
LT D+ +A + + I+L NK E P R+ I F +G++P +
Sbjct: 274 LTDQDQRVAGFAAERGCAMVIVL--NKWDLIEGPEAKAEIRERIADRLTF--VGYAPVIA 329
Query: 336 ISAISGTGTGELLDLVCSELKKVEGT 361
ISA++G + D V + + T
Sbjct: 330 ISALTGKKVDRIWDAVNAAYENYSQT 355
>gi|288924558|ref|ZP_06418495.1| ribosome-associated GTPase EngA [Prevotella buccae D17]
gi|315607420|ref|ZP_07882416.1| ribosome-associated GTPase EngA [Prevotella buccae ATCC 33574]
gi|402306468|ref|ZP_10825513.1| ribosome-associated GTPase EngA [Prevotella sp. MSX73]
gi|288338345|gb|EFC76694.1| ribosome-associated GTPase EngA [Prevotella buccae D17]
gi|315250852|gb|EFU30845.1| ribosome-associated GTPase EngA [Prevotella buccae ATCC 33574]
gi|400379792|gb|EJP32624.1| ribosome-associated GTPase EngA [Prevotella sp. MSX73]
Length = 437
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/310 (44%), Positives = 181/310 (58%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL RAIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQSRRAIVSDTAGTTRDRQYGKCQWNGREFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I RQ A EE+ +++FLVD G
Sbjct: 63 KSD-DIFED--------------------------AIRRQVLVATEEADLVLFLVDVSTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + +IL NK ++ + + +EF+ LG P ISA +G GT
Sbjct: 96 VTDWDEDVAMILRRTKLP--VILVANKVDNSSE-YYEAAEFYKLGLGDPHCISAATGGGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLDL+ L+K++ E+ E E+ IP A+VGRPNVGKSSI+NA +GEDR IV+ I+G
Sbjct: 153 GDLLDLI---LEKMQPKEE-EELEDDIPRFAVVGRPNVGKSSIINAFIGEDRNIVTEIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+I T + G F L+DTAGIR++ ++ E SV R+ RAI SDV L+
Sbjct: 209 TTRDSIYTRY-DKFGFDFYLVDTAGIRRKNKVSED---LEFYSVMRSIRAIENSDVCILM 264
Query: 465 IEAMACITEQ 474
I+A I Q
Sbjct: 265 IDATRGIETQ 274
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 29/150 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+PR A+VGRPNVGKS++ N +G +R IV + G TRD +Y R +F LVDT G+
Sbjct: 175 IPRFAVVGRPNVGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYDKFGFDFYLVDTAGI- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ AIE S V I ++D
Sbjct: 234 ---RRKNKVSEDLEFYSVM-----------------------RSIRAIENSDVCILMIDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNK 312
G+ D I ++KN +K +++ VNK
Sbjct: 268 TRGIETQDMNIFQLIQKN--NKSLVVVVNK 295
>gi|125973539|ref|YP_001037449.1| GTP-binding protein EngA [Clostridium thermocellum ATCC 27405]
gi|256003357|ref|ZP_05428348.1| small GTP-binding protein [Clostridium thermocellum DSM 2360]
gi|281417743|ref|ZP_06248763.1| ribosome-associated GTPase EngA [Clostridium thermocellum JW20]
gi|385778540|ref|YP_005687705.1| ribosome-associated GTPase EngA [Clostridium thermocellum DSM 1313]
gi|419723631|ref|ZP_14250746.1| GTP-binding protein engA [Clostridium thermocellum AD2]
gi|419724544|ref|ZP_14251606.1| GTP-binding protein engA [Clostridium thermocellum YS]
gi|166224331|sp|A3DE77.1|DER_CLOTH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|125713764|gb|ABN52256.1| ribosome-associated GTPase EngA [Clostridium thermocellum ATCC
27405]
gi|255992647|gb|EEU02738.1| small GTP-binding protein [Clostridium thermocellum DSM 2360]
gi|281409145|gb|EFB39403.1| ribosome-associated GTPase EngA [Clostridium thermocellum JW20]
gi|316940220|gb|ADU74254.1| ribosome-associated GTPase EngA [Clostridium thermocellum DSM 1313]
gi|380772091|gb|EIC05949.1| GTP-binding protein engA [Clostridium thermocellum YS]
gi|380780313|gb|EIC09996.1| GTP-binding protein engA [Clostridium thermocellum AD2]
Length = 440
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 185/312 (59%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS FN LVG +IV D PGVTRDR+Y W +F L+DTGG+
Sbjct: 4 PVVAVVGRPNVGKSTFFNYLVGKRISIVEDTPGVTRDRIYAEVEWRNKKFTLIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S+ + IM+ + +RQA AIE + +IIF+VD +
Sbjct: 64 YSEDK--IMQQM---------------------------KRQAEIAIETADIIIFMVDVK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
G+TA+D+E+A LRK K +I+AVNK + + EF++LGF L IS+I G
Sbjct: 95 DGVTASDKEVATLLRKT--KKPVIVAVNKVDKIGELPADFYEFYNLGFGELMAISSIHGL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD E+ K ED + + + +A+VG+PNVGKSS++N ++GE+R IVS I
Sbjct: 153 GMGDLLD----EIFKYFPEEDAEDYDEDVIKVAVVGKPNVGKSSLINRILGEERVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F E KF IDTAGIR+++ I E S+ R++ AI R+DV
Sbjct: 209 PGTTRDAIDT-FVENEHGKFVFIDTAGIRRQSKI---NEKIEKYSIIRSWTAIERADVCL 264
Query: 463 LVIEAMACITEQ 474
++I+A +TEQ
Sbjct: 265 ILIDAKEGVTEQ 276
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 38/201 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH-EFMLVDTGGVLN 223
+VA+VG+PNVGKS+L NR++G R IV D PG TRD + EH +F+ +DT G+
Sbjct: 179 KVAVVGKPNVGKSSLINRILGEERVIVSDIPGTTRDAI-DTFVENEHGKFVFIDTAGI-- 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ Q I E + + I ++ AIE + V + L+D +
Sbjct: 236 --RRQSKINEKIEKYSII-----------------------RSWTAIERADVCLILIDAK 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSPL-PIS 337
G+T D +IA + + K I+ VNK + K + E+ LGF P+
Sbjct: 271 EGVTEQDTKIAGYAHEQ--GKASIIVVNKWDLIEKQTGTLEEYRRTVHEKLGFMLYAPVI 328
Query: 338 AISGTGTGELLDLVCSELKKV 358
IS TG+ +D + +K V
Sbjct: 329 FISAL-TGQRVDRIYGLIKHV 348
>gi|339443166|ref|YP_004709171.1| hypothetical protein CXIVA_21020 [Clostridium sp. SY8519]
gi|338902567|dbj|BAK48069.1| hypothetical protein CXIVA_21020 [Clostridium sp. SY8519]
Length = 442
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 183/312 (58%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN L G +IV D PGVTRDR+Y W H F L+DTGG+
Sbjct: 4 PVVAVVGRPNVGKSTLFNALAGERISIVEDTPGVTRDRIYADVEWLNHPFTLIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK D+ + S + QA AI + VIIF+ D
Sbjct: 64 DSK-------DIIL----------------------SQMREQAEIAIASADVIIFMTDVH 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD ++AD LR+++ K +IL VNK +S +K + V EF++LG P PISA S
Sbjct: 95 QGLIDADAKVADLLRRSH--KPVILVVNKVDSFQKMMPDVYEFYNLGIGDPHPISAASRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++L+ V + K E E+ + P +AI+G+PNVGKSS++N L G+ R IVS I
Sbjct: 153 GLGDMLEAVVAHFPKQEQEEEEDDR----PKVAIIGKPNVGKSSLINRLSGDSRVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT+ + G+++ IDTAG+R++ I E S+ RA A+ R+DVV
Sbjct: 209 AGTTRDAIDTDISY-NGREYVFIDTAGLRRKNKIKEE---IERFSIIRAVTAVERADVVV 264
Query: 463 LVIEAMACITEQ 474
++I+A+ +TEQ
Sbjct: 265 ILIDAVEGVTEQ 276
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P+VAI+G+PNVGKS+L NRL G +R IV D G TRD + + E++ +DT G+
Sbjct: 178 PKVAIIGKPNVGKSSLINRLSGDSRVIVSDIAGTTRDAIDTDISYNGREYVFIDTAGLRR 237
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+K + I E +I +A A+E + V++ L+D
Sbjct: 238 KNKIKEEI-ERFSII--------------------------RAVTAVERADVVVILIDAV 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----L 334
G+T D +IA + K II+AVNK ++ K V ++ +L F P +
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGIIVAVNKWDAIEKTDKSVYQYTDRIRQTLSFMPYAEIM 328
Query: 335 PISAISGTGTGELLDLV 351
ISA +G +L D++
Sbjct: 329 FISAKTGQRVSKLFDMI 345
>gi|281421766|ref|ZP_06252765.1| ribosome-associated GTPase EngA [Prevotella copri DSM 18205]
gi|281404261|gb|EFB34941.1| ribosome-associated GTPase EngA [Prevotella copri DSM 18205]
Length = 437
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/310 (43%), Positives = 180/310 (58%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL RAIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQSRRAIVSDTAGTTRDRQYGKCSWNGREFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I +Q A EE+ +++FLVD G
Sbjct: 63 KSD-DIFED--------------------------AIRKQVLVATEEADLVLFLVDVNTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT DE++A LR+ + +IL NK ++ + Q +EF+ LG P ISA +G GT
Sbjct: 96 LTDWDEDVALILRRAKLP--VILVANKVDNSAE-YYQAAEFYKLGLGDPQCISAATGGGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD++ +L+ + E+ +EE+ IP A+VGRPN GKSSI+NA +GEDR IV+ I+G
Sbjct: 153 GDLLDMILDKLQ--DNPEEAIEED--IPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+I T + G F L+DTAGIR++ ++ E SV R+ RAI SDV L+
Sbjct: 209 TTRDSIYTRY-DKFGFDFYLVDTAGIRRKNKVSED---LEFYSVMRSIRAIENSDVCILM 264
Query: 465 IEAMACITEQ 474
++A I Q
Sbjct: 265 LDATRGIETQ 274
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 29/153 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT
Sbjct: 172 EEDIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYDKFGFDFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIE S V I +
Sbjct: 232 GI----RRKNKVSEDLEFYSVM-----------------------RSIRAIENSDVCILM 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
+D G+ D I ++KN +K +++ VNK
Sbjct: 265 LDATRGIETQDMNIFQLIQKN--NKSLVVVVNK 295
>gi|256847158|ref|ZP_05552604.1| ribosome-associated GTPase EngA [Lactobacillus coleohominis
101-4-CHN]
gi|256715822|gb|EEU30797.1| ribosome-associated GTPase EngA [Lactobacillus coleohominis
101-4-CHN]
Length = 437
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 185/305 (60%), Gaps = 43/305 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G +IV D PGVTRDR+Y + W F L+DTGG
Sbjct: 5 PIVAIVGRPNVGKSTLFNRIAGERISIVEDTPGVTRDRIYTHAEWLGKNFNLIDTGG--- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I M PL T+ I QA AI+E+ VI+ +VD Q
Sbjct: 62 -----------------IDMSDQPLTTQ----------IREQAEVAIDEADVIVLVVDVQ 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K ++LAVNK ++P + + +F+SLG P P+S++ G
Sbjct: 95 NGITDADEKVAQLLYRS--NKPVVLAVNKVDNPERR-SDIYDFYSLGLGEPYPVSSVHGI 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V +K T D +++ +++GRPNVGKSS++NA++G+ R IVS I
Sbjct: 152 GLGDLLDAV---IKNFPDTAD--NQKDDSIRFSLIGRPNVGKSSLVNAILGQQRVIVSDI 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAI+T+F + +KF ++DTAGI+K+ + + TE ++ R+ +AI SDVV
Sbjct: 207 AGTTRDAINTQFVA-DHRKFTMVDTAGIKKKGKLYEN---TERYALMRSMKAIDDSDVVL 262
Query: 463 LVIEA 467
+V+ A
Sbjct: 263 VVLNA 267
>gi|452824931|gb|EME31931.1| GTP-binding protein [Galdieria sulphuraria]
Length = 541
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 204/358 (56%), Gaps = 45/358 (12%)
Query: 124 YSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRL 183
+S L+++Q +D+ + + +++ KT I LP VAIVGRPNVGKS L NRL
Sbjct: 54 FSQLVAKQNSTKDDLTSQTEEKTRKEIPKTRI---IRRNLPLVAIVGRPNVGKSTLLNRL 110
Query: 184 VGGNR--AIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTI 241
R AI VD PG+TRDR Y R+FW +F LVDTGG+ + ++
Sbjct: 111 TRDFRFGAIAVDVPGITRDRTYHRAFWNGIDFELVDTGGL---------VFDE------- 154
Query: 242 GMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNY 301
G E +P I QA A+ E+ IF+VD G+ D +IA +R+
Sbjct: 155 GREQVPFLKE----------IREQALIALNEATAAIFVVDSTVGVADLDRQIAKMIRR-- 202
Query: 302 MDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLD----LVCSELK 356
+ ++LAVNKC+ ++ + +EFW LG P P+S I G GTG+LLD +C E
Sbjct: 203 LGLPVLLAVNKCDDEQR-YLDANEFWKLGLGEPFPVSGIHGIGTGDLLDKLVEYIC-ERG 260
Query: 357 KVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTG 416
V LV+E N + IAIVGRPN GKSSILN LVGE R IVS I GTTRD IDT
Sbjct: 261 NVFHEPYLVDERN-VRRIAIVGRPNAGKSSILNRLVGETRAIVSDIPGTTRDTIDTTIQR 319
Query: 417 PEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQ 474
E + + L+DTAGIR++ + TE +NRAF+AIRR+D+V LV++A+A I EQ
Sbjct: 320 DE-KIYCLMDTAGIRRKKMVEYG---TEFFMINRAFKAIRRADLVILVVDAVADIVEQ 373
>gi|153939462|ref|YP_001391817.1| GTP-binding protein EngA [Clostridium botulinum F str. Langeland]
gi|384462825|ref|YP_005675420.1| ribosome-associated GTPase EngA [Clostridium botulinum F str.
230613]
gi|166224329|sp|A7GGA7.1|DER_CLOBL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|152935358|gb|ABS40856.1| ribosome-associated GTPase EngA [Clostridium botulinum F str.
Langeland]
gi|295319842|gb|ADG00220.1| ribosome-associated GTPase EngA [Clostridium botulinum F str.
230613]
Length = 439
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 182/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + S + RQA AIE + VIIFLVDG+
Sbjct: 62 ----EPK-SEDIIV----------------------SQMRRQAQIAIEMANVIIFLVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL ADEE+A LRK+ K ++L VNK + K EF++LG P+ IS+
Sbjct: 95 EGLAPADEEVAQMLRKS--KKPVVLVVNKIDK-LKDENNAYEFYNLGIGDPVTISSSQAL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V K E + E N IA +G+PNVGKSS++N L+GE+R IVS I
Sbjct: 152 GLGDMLDRVVEYFKDDESDGEDDERIN----IAFIGKPNVGKSSLINKLLGEERLIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD+ID+ + E +F LIDTAG+R+++ + E SV R + +I R+DV
Sbjct: 208 PGTTRDSIDS-YVDTEFGEFTLIDTAGLRRKSKVKEE---IERYSVIRTYASIERADVCI 263
Query: 463 LVIEAMACITEQ 474
L+I+A I+EQ
Sbjct: 264 LMIDATEGISEQ 275
>gi|253578391|ref|ZP_04855663.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850709|gb|EES78667.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 441
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 185/312 (59%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGEKISIVKDTPGVTRDRIYADVTWLDKTFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ D+ + S + QA AI+ + VIIF+ D
Sbjct: 62 ----EPD-SSDIIL----------------------SQMREQAQIAIDTADVIIFITDVH 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR++ K ++L VNK +S +K +M V EF++LG P+PISA +
Sbjct: 95 QGLVDSDAKVADMLRRS--GKPVVLVVNKVDSIQKFMMDVYEFYNLGIGEPIPISAANRM 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + TE E++ IP IAIVG+PNVGKSS++N L+GEDR IVS I
Sbjct: 153 GLGDMLDEVAKHFPEDADTE----EDDEIPRIAIVGKPNVGKSSLVNKLLGEDRVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DT +G+ + IDTAG+R++ + E SV R A+ R+DVV
Sbjct: 209 AGTTRDAVDTRVKW-QGKDYIFIDTAGLRRKGKVKEE---IERYSVIRTVTAVERADVVI 264
Query: 463 LVIEAMACITEQ 474
++I+A +TEQ
Sbjct: 265 VMIDASEGVTEQ 276
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 29/156 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+PR+AIVG+PNVGKS+L N+L+G +R IV D G TRD + R W +++ +DT G+
Sbjct: 177 IPRIAIVGKPNVGKSSLVNKLLGEDRVIVSDIAGTTRDAVDTRVKWQGKDYIFIDTAGLR 236
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K + I E ++ T+ A+E + V+I ++D
Sbjct: 237 RKGKVKEEI-ERYSVIRTV--------------------------TAVERADVVIVMIDA 269
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D +IA + K +I+AVNK ++ K
Sbjct: 270 SEGVTEQDAKIAGIAHER--GKGVIIAVNKWDAIEK 303
>gi|163782118|ref|ZP_02177117.1| GTP binding protein Era [Hydrogenivirga sp. 128-5-R1-1]
gi|159882650|gb|EDP76155.1| GTP binding protein Era [Hydrogenivirga sp. 128-5-R1-1]
Length = 431
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/320 (44%), Positives = 189/320 (59%), Gaps = 46/320 (14%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RV I+GRPNVGKS+LFNR+VG +AIV D PGVTRD + ++ WG EF+LVDTGG+ V
Sbjct: 4 RVVIIGRPNVGKSSLFNRIVGRRKAIVEDIPGVTRDSVESKAEWGGKEFLLVDTGGL--V 61
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
S I+E + T IER+ +E S VI+F+V +
Sbjct: 62 PDSHDEILEGVRKT-----------------------IERE----VERSDVILFVVSVKD 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTG 343
G+T DEEIA L + DK +IL VNK ++ R + VSEF+ LGF P+S++ G G
Sbjct: 95 GVTPLDEEIARLLYP-FGDK-VILVVNKVDTDRDEEV-VSEFYQLGFRHVFPVSSVHGRG 151
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
GELLD V L+ G+ +L E R + + GRPNVGKSS+LNAL+ EDR IVSP++
Sbjct: 152 VGELLDEVVKRLRY--GSVELSYEGIR---LTLAGRPNVGKSSLLNALLKEDRVIVSPVA 206
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRD ++ F G KF L+DTAG+R+ + + E SV R+ +AI SDVV L
Sbjct: 207 GTTRDTVEVPFEW-NGNKFVLVDTAGVRRPSNVEYG---VEFFSVGRSLKAIESSDVVCL 262
Query: 464 VIEAMACITEQADWRDHRWG 483
V++A +T Q D R G
Sbjct: 263 VLDAGEGVTRQ----DKRLG 278
>gi|300854433|ref|YP_003779417.1| GTP-binding protein [Clostridium ljungdahlii DSM 13528]
gi|300434548|gb|ADK14315.1| putative GTP-binding protein [Clostridium ljungdahlii DSM 13528]
Length = 438
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/312 (41%), Positives = 181/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y + W ++ F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVEDTPGVTRDRVYAEAEWLKYNFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P D+ I S + RQA A+E + IIF+VDG+
Sbjct: 62 ----EPE-STDVII----------------------SQMRRQAQVAVETADTIIFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAAD E+A LRK+ K ++L VNK ++ + V EF++LG P+ ISA
Sbjct: 95 EGVTAADREVAQMLRKS--KKPVVLVVNKIDNINQN-AYVYEFYNLGIGEPMAISASQAL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V K E + E +A +G+PNVGKSS++N L+GE+R IVS I
Sbjct: 152 GLGDMLDKVVENFKDDEDDDIDSE----YIKVAFIGKPNVGKSSLINKLLGEERVIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDA+D+ G K LIDTAG+RK++ + E SV R + AI R+DV
Sbjct: 208 PGTTRDAVDSYLETDYG-KLLLIDTAGLRKKSKVKEE---IERYSVIRTYTAIERADVCV 263
Query: 463 LVIEAMACITEQ 474
L+++A+ I+EQ
Sbjct: 264 LILDAVHNISEQ 275
>gi|168180594|ref|ZP_02615258.1| GTP-binding protein [Clostridium botulinum NCTC 2916]
gi|226949875|ref|YP_002804966.1| GTP-binding protein EngA [Clostridium botulinum A2 str. Kyoto]
gi|387818745|ref|YP_005679092.1| GTP-binding protein EngA [Clostridium botulinum H04402 065]
gi|254783146|sp|C1FSU2.1|DER_CLOBJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|182668460|gb|EDT80439.1| GTP-binding protein [Clostridium botulinum NCTC 2916]
gi|226841615|gb|ACO84281.1| ribosome-associated GTPase EngA [Clostridium botulinum A2 str.
Kyoto]
gi|322806789|emb|CBZ04358.1| GTP-binding protein EngA [Clostridium botulinum H04402 065]
Length = 439
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 182/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + S + RQA AIE + VIIFLVDG+
Sbjct: 62 ----EPK-SEDIIV----------------------SQMRRQAQIAIEMANVIIFLVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL ADEE+A LRK+ K ++L VNK + K EF++LG P+ IS+
Sbjct: 95 EGLAPADEEVAQMLRKS--KKPVVLVVNKIDK-LKDENNAYEFYNLGIGDPVTISSSQAL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V K E + E N IA +G+PNVGKSS++N L+GE+R IVS I
Sbjct: 152 GLGDMLDRVVEYFKDDESDGEDDERIN----IAFIGKPNVGKSSLINKLLGEERLIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD+ID+ + E +F LIDTAG+R+++ + E SV R + +I R+DV
Sbjct: 208 PGTTRDSIDS-YVDTEFGEFTLIDTAGLRRKSKVKEE---IERYSVIRTYASIERADVCI 263
Query: 463 LVIEAMACITEQ 474
L+I+A I+EQ
Sbjct: 264 LMIDATEGISEQ 275
>gi|451343141|ref|ZP_21912217.1| ribosome-associated GTPase EngA [Eggerthia catenaformis OT 569 =
DSM 20559]
gi|449338137|gb|EMD17289.1| ribosome-associated GTPase EngA [Eggerthia catenaformis OT 569 =
DSM 20559]
Length = 435
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/310 (43%), Positives = 183/310 (59%), Gaps = 43/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGR NVGKS LFNR+VG +IV D PGVTRDR+Y R+ W EF ++DTGG+
Sbjct: 6 VAIVGRANVGKSTLFNRIVGERISIVEDTPGVTRDRIYARALWLTREFNIIDTGGIE--- 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ED T +I + Q+ AIEE+ VIIF+V+G+ G
Sbjct: 63 ------LEDDDFTQSIKI---------------------QSEIAIEEADVIIFVVNGREG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T+ DE +A L+K+ +K I+LAVNK + + + ++++LG P+P+S+ G G
Sbjct: 96 ITSEDEMVARILQKS--NKPIVLAVNKIDD-KIFADNIYDYYALGVGDPIPVSSAHGIGV 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V L K E +E+ I+GRPNVGKSS+ NAL+GEDR IVS I G
Sbjct: 153 GDLLDEVIHLLPKDESP-----QEHDDIRFCIIGRPNVGKSSLTNALLGEDRVIVSEIEG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAI+ F +G K+ +IDTAG+RKR I + E SV RA A+ SDVV +V
Sbjct: 208 TTRDAINCSFE-KDGTKYTVIDTAGMRKRGKIYEN---IEKYSVLRALSALENSDVVLVV 263
Query: 465 IEAMACITEQ 474
++ I EQ
Sbjct: 264 LDGERGIIEQ 273
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 40/177 (22%)
Query: 161 HLLP-----------RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG 209
HLLP R I+GRPNVGKS+L N L+G +R IV + G TRD +
Sbjct: 161 HLLPKDESPQEHDDIRFCIIGRPNVGKSSLTNALLGEDRVIVSEIEGTTRDAINCSFEKD 220
Query: 210 EHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAA 269
++ ++DT G+ K NI + +V R A +A
Sbjct: 221 GTKYTVIDTAGMRKRGKIYENI-------------------EKYSVLR--------ALSA 253
Query: 270 IEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+E S V++ ++DG+ G+ D+ IA + ++ K ++ VNK ++ +K +++F
Sbjct: 254 LENSDVVLVVLDGERGIIEQDKHIAGYAHQS--GKGVLFVVNKWDAVKKDEKTMAKF 308
>gi|170757031|ref|YP_001782064.1| GTP-binding protein EngA [Clostridium botulinum B1 str. Okra]
gi|429245957|ref|ZP_19209322.1| GTP-binding protein Der [Clostridium botulinum CFSAN001628]
gi|229710728|sp|B1IIN2.1|DER_CLOBK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|169122243|gb|ACA46079.1| ribosome-associated GTPase EngA [Clostridium botulinum B1 str.
Okra]
gi|428757015|gb|EKX79522.1| GTP-binding protein Der [Clostridium botulinum CFSAN001628]
Length = 439
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 182/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + S + RQA AIE + VIIFLVDG+
Sbjct: 62 ----EPE-SEDIIV----------------------SQMRRQAQIAIEMANVIIFLVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL ADEE+A LRK+ K ++L VNK + K EF++LG P+ IS+
Sbjct: 95 EGLAPADEEVAQMLRKS--KKPVVLVVNKIDK-LKDENNAYEFYNLGIGDPVTISSSQAL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V K E + E N IA +G+PNVGKSS++N L+GE+R IVS I
Sbjct: 152 GLGDMLDRVVEYFKDDELDGEEDERIN----IAFIGKPNVGKSSLINKLLGEERLIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD+ID+ + E +F LIDTAG+R+++ + E SV R + +I R+DV
Sbjct: 208 PGTTRDSIDS-YVDTEFGEFTLIDTAGLRRKSKVKEE---IERYSVIRTYASIERADVCI 263
Query: 463 LVIEAMACITEQ 474
L+I+A I+EQ
Sbjct: 264 LMIDATEGISEQ 275
>gi|338211231|ref|YP_004655284.1| GTP-binding protein engA [Runella slithyformis DSM 19594]
gi|336305050|gb|AEI48152.1| GTP-binding protein engA [Runella slithyformis DSM 19594]
Length = 435
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/310 (41%), Positives = 181/310 (58%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ +AI+ D+ GVTRDR YG +FW E F ++DTGG + S
Sbjct: 5 VAIVGRPNVGKSTFFNRLIKERQAIMDDQSGVTRDRHYGHAFWTEQYFTVIDTGGYVVGS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
++ ED A RE Q A++E+ VI+F+VD AG
Sbjct: 65 D---DVFED--------------AIRE------------QVEIAMDEATVILFMVDSMAG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT D+E A +R++ K + L NK E+ + +EF+ LG P P+S+ +G GT
Sbjct: 96 LTDLDKEFAGVVRRS--KKPVFLVANKAETVERQ-HATAEFYELGLGDPYPVSSQTGHGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V K G ED + IP I+I+GRPNVGKSS LN L G++R+IV+ I+G
Sbjct: 153 GDLLDEVVKHF-KTPGVED---PDAGIPKISILGRPNVGKSSFLNVLTGKERSIVTDIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAI+T + G+ F L+DTAGIR++A + + E S R +A+ SDVV ++
Sbjct: 209 TTRDAINTHYKA-FGKDFILVDTAGIRRKAKVKDA---IEFYSTLRTVKAMEESDVVIVM 264
Query: 465 IEAMACITEQ 474
++A + Q
Sbjct: 265 LDATRGLEAQ 274
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 29/156 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P+ +P+++I+GRPNVGKS+ N L G R+IV D G TRD + +F+LVDT
Sbjct: 171 PDAGIPKISILGRPNVGKSSFLNVLTGKERSIVTDIAGTTRDAINTHYKAFGKDFILVDT 230
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + + + + +T+ + A+EES V+I
Sbjct: 231 AGI----RRKAKVKDAIEFYSTL-----------------------RTVKAMEESDVVIV 263
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
++D GL A D I K K I++ +NK +
Sbjct: 264 MLDATRGLEAQDMHIIGMAHK--AKKGILIMINKWD 297
>gi|148380476|ref|YP_001255017.1| GTP-binding protein EngA [Clostridium botulinum A str. ATCC 3502]
gi|153932865|ref|YP_001384700.1| GTP-binding protein EngA [Clostridium botulinum A str. ATCC 19397]
gi|153936714|ref|YP_001388221.1| GTP-binding protein EngA [Clostridium botulinum A str. Hall]
gi|166224327|sp|A7FW89.1|DER_CLOB1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166224328|sp|A5I4V0.1|DER_CLOBH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|148289960|emb|CAL84073.1| putative GTP-binding protein EngA [Clostridium botulinum A str.
ATCC 3502]
gi|152928909|gb|ABS34409.1| GTP-binding protein [Clostridium botulinum A str. ATCC 19397]
gi|152932628|gb|ABS38127.1| ribosome-associated GTPase EngA [Clostridium botulinum A str. Hall]
Length = 439
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 184/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + S + RQA AIE + VIIFLVDG+
Sbjct: 62 ----EPK-SEDIIV----------------------SQMRRQAQIAIEMANVIIFLVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD+E+A LRK+ K ++L VNK + K EF++LG P+ IS+
Sbjct: 95 EGLAPADKEVAQMLRKS--KKPVVLVVNKIDK-LKDENNAYEFYNLGIGDPVTISSSQAL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V K E E++ RI IA +G+PNVGKSS++N L+GE+R IVS I
Sbjct: 152 GLGDMLDRVVEYFKDDESAG---EDDERI-NIAFIGKPNVGKSSLINKLLGEERLIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD+ID+ + + +F LIDTAG+R+++ + E SV R + +I R+DV
Sbjct: 208 PGTTRDSIDS-YVDTDFGEFTLIDTAGLRRKSKVKEE---IERYSVIRTYASIERADVCI 263
Query: 463 LVIEAMACITEQ 474
L+I+A I+EQ
Sbjct: 264 LMIDATEGISEQ 275
>gi|390954549|ref|YP_006418307.1| ribosome-associated GTPase EngA [Aequorivita sublithincola DSM
14238]
gi|390420535|gb|AFL81292.1| ribosome-associated GTPase EngA [Aequorivita sublithincola DSM
14238]
Length = 434
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/303 (42%), Positives = 179/303 (59%), Gaps = 42/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS FNRL+ AIV GVTRDR YG+S W EF L+DTGG +
Sbjct: 4 VAVVGRPNVGKSTFFNRLIQRREAIVDAVSGVTRDRHYGKSDWNGKEFSLIDTGGYV--- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K +I E + I++Q AI+E+ IIF+VD ++G
Sbjct: 61 KGSDDIFE--------------------------AEIDKQVELAIDEADAIIFMVDVESG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D+E+A LR++ K I LA+NK + + + EF+SLGF +S+I+G+GT
Sbjct: 95 VTGMDQEVAKLLRRS--KKPIFLAINKVDGASR-MNAALEFYSLGFEYQYNLSSINGSGT 151
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GELLD + L E +D + +P A+VGRPN GKSS +NAL+G+DR IV+ I+G
Sbjct: 152 GELLDDLVKALPDTEEPDD-----SELPRFAVVGRPNAGKSSFINALIGKDRYIVTDIAG 206
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+IDT++ G +F L+DTAGIRK++ + E SV R+ RAI DV+ LV
Sbjct: 207 TTRDSIDTKYDR-FGFEFNLVDTAGIRKKSKVKED---LEFYSVMRSVRAIEHCDVIILV 262
Query: 465 IEA 467
+A
Sbjct: 263 FDA 265
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 65/147 (44%), Gaps = 28/147 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G +R IV D G TRD + + EF LVDT G+
Sbjct: 173 LPRFAVVGRPNAGKSSFINALIGKDRYIVTDIAGTTRDSIDTKYDRFGFEFNLVDTAGIR 232
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
SK + EDL + + ++ AIE VII + D
Sbjct: 233 KKSK----VKEDLEFYSVM-----------------------RSVRAIEHCDVIILVFDA 265
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILA 309
G E I WL + +ILA
Sbjct: 266 TRGFDGQVENIF-WLAQRNNKGIVILA 291
>gi|323343319|ref|ZP_08083546.1| ribosome-associated GTPase EngA [Prevotella oralis ATCC 33269]
gi|323095138|gb|EFZ37712.1| ribosome-associated GTPase EngA [Prevotella oralis ATCC 33269]
Length = 458
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/311 (43%), Positives = 181/311 (58%), Gaps = 43/311 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL +AIV D G TRDR YG+ W EF +VDTGG V+N
Sbjct: 26 VAIVGRPNVGKSTLFNRLTQSRKAIVSDTAGTTRDRQYGKCNWNGREFSVVDTGGWVVN- 84
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+I ED I RQ A EE+ ++IFLVD
Sbjct: 85 ---SDDIFED--------------------------AIRRQVLVATEEADIVIFLVDTMT 115
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
G+T DE++A LR++ + ++L NK ++ Q ++F+ LG P+ +SA +G G
Sbjct: 116 GVTDWDEDVAQILRRSKLP--VLLVANKVDNS-SDYYQAADFYRLGLGDPVCVSAATGGG 172
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
TG+LLDL+ ++LK T+D + ++ IP A+VGRPNVGKSSI+NA +GEDR IV+ I+
Sbjct: 173 TGDLLDLLITKLK----TDDFDDVQDDIPRFAVVGRPNVGKSSIINAFIGEDRNIVTEIA 228
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRD+I T F G F L+DTAGIR++ + E SV R+ R+I SDV L
Sbjct: 229 GTTRDSIYTRF-DKFGFDFYLVDTAGIRRKNKVTED---LEFYSVMRSIRSIENSDVCIL 284
Query: 464 VIEAMACITEQ 474
+I+A I Q
Sbjct: 285 MIDATRGIEAQ 295
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 29/163 (17%)
Query: 150 KRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG 209
K KT + + +PR A+VGRPNVGKS++ N +G +R IV + G TRD +Y R
Sbjct: 183 KLKTDDFDDVQDDIPRFAVVGRPNVGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRFDKF 242
Query: 210 EHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAA 269
+F LVDT G+ + + + EDL + + ++ +
Sbjct: 243 GFDFYLVDTAGI----RRKNKVTEDLEFYSVM-----------------------RSIRS 275
Query: 270 IEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
IE S V I ++D G+ A D I ++KN +K +++ VNK
Sbjct: 276 IENSDVCILMIDATRGIEAQDMNIFQLIQKN--NKSLVVVVNK 316
>gi|313897444|ref|ZP_07830987.1| ribosome biogenesis GTPase Der [Clostridium sp. HGF2]
gi|422327261|ref|ZP_16408288.1| ribosome-associated GTPase EngA [Erysipelotrichaceae bacterium
6_1_45]
gi|312957814|gb|EFR39439.1| ribosome biogenesis GTPase Der [Clostridium sp. HGF2]
gi|371663955|gb|EHO29139.1| ribosome-associated GTPase EngA [Erysipelotrichaceae bacterium
6_1_45]
Length = 436
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 179/310 (57%), Gaps = 43/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNR++G ++IV D PGVTRDR+YG++ W EF ++DTG
Sbjct: 6 VAIVGRPNVGKSTIFNRIIGERKSIVEDTPGVTRDRIYGKAEWLTREFRVIDTG------ 59
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
GI LA ++ + I Q AI+E+ I+F+V G+ G
Sbjct: 60 -------------------GIQLANQD-----FQTEINMQVEIAIDEADCIVFVVSGKDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT DE +A L K K +ILAVNK + + + EF+SLG PL +S G G
Sbjct: 96 LTHDDEYVARLLHKT--KKPVILAVNKVDDFAQN-DAIYEFYSLGLGDPLAVSGAHGIGI 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G++LD V L + E E + + ++GRPNVGKSS++NA++ ++R IVS I G
Sbjct: 153 GDVLDAVIHALPEKEKN-----EYDGMTKFCVIGRPNVGKSSLVNAILNQERVIVSNIEG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT F EG+++ +IDTAGIRKR + + E SV RA AI RSDVV +V
Sbjct: 208 TTRDAIDTPFK-REGKEYVVIDTAGIRKRGKVYEN---IEKYSVLRAMSAIERSDVVLVV 263
Query: 465 IEAMACITEQ 474
I+ I +Q
Sbjct: 264 IDGEKGIRDQ 273
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 40/188 (21%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGV 221
+ + ++GRPNVGKS+L N ++ R IV + G TRD + F E E++++DT G+
Sbjct: 174 MTKFCVIGRPNVGKSSLVNAILNQERVIVSNIEGTTRDAI-DTPFKREGKEYVVIDTAGI 232
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
K NI + +V R A +AIE S V++ ++D
Sbjct: 233 RKRGKVYENI-------------------EKYSVLR--------AMSAIERSDVVLVVID 265
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP 333
G+ G+ D+ +A + + K +++ NK ++ K + ++F L ++P
Sbjct: 266 GEKGIRDQDKHVAGYAHE--AGKGVVIVYNKWDAVEKDEQTMHTIEKEIRAQFLYLSYAP 323
Query: 334 -LPISAIS 340
L +SA+
Sbjct: 324 VLFVSALK 331
>gi|373121249|ref|ZP_09535117.1| ribosome-associated GTPase EngA [Erysipelotrichaceae bacterium
21_3]
gi|371665267|gb|EHO30432.1| ribosome-associated GTPase EngA [Erysipelotrichaceae bacterium
21_3]
Length = 436
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 179/310 (57%), Gaps = 43/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNR++G ++IV D PGVTRDR+YG++ W EF ++DTG
Sbjct: 6 VAIVGRPNVGKSTIFNRIIGERKSIVEDTPGVTRDRIYGKAEWLTREFRVIDTG------ 59
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
GI LA ++ + I Q AI+E+ I+F+V G+ G
Sbjct: 60 -------------------GIQLANQD-----FQTEINMQVEIAIDEADCIVFVVSGKDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT DE +A L K K +ILAVNK + + + EF+SLG PL +S G G
Sbjct: 96 LTHDDEYVARLLHKT--KKPVILAVNKVDDFAQN-DAIYEFYSLGLGDPLAVSGAHGIGI 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G++LD V L + E E + + ++GRPNVGKSS++NA++ ++R IVS I G
Sbjct: 153 GDVLDAVIHALPEKEKN-----EYDGMTKFCVIGRPNVGKSSLVNAILNQERVIVSNIEG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT F EG+++ +IDTAGIRKR + + E SV RA AI RSDVV +V
Sbjct: 208 TTRDAIDTPFK-REGKEYVVIDTAGIRKRGKVYEN---IEKYSVLRAMSAIERSDVVLVV 263
Query: 465 IEAMACITEQ 474
I+ I +Q
Sbjct: 264 IDGEKGIRDQ 273
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 39/181 (21%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGV 221
+ + ++GRPNVGKS+L N ++ R IV + G TRD + F E E++++DT G+
Sbjct: 174 MTKFCVIGRPNVGKSSLVNAILNQERVIVSNIEGTTRDAI-DTPFKREGKEYVVIDTAGI 232
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
K NI + +V R A +AIE S V++ ++D
Sbjct: 233 RKRGKVYENI-------------------EKYSVLR--------AMSAIERSDVVLVVID 265
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP 333
G+ G+ D+ +A + + K +I+ NK ++ K + ++F L ++P
Sbjct: 266 GEKGIRDQDKHVAGYAHE--AGKGVIIVYNKWDAVEKDEQTMHTIEKEIRAQFLYLSYAP 323
Query: 334 L 334
+
Sbjct: 324 I 324
>gi|374598814|ref|ZP_09671816.1| GTP-binding protein engA [Myroides odoratus DSM 2801]
gi|423322994|ref|ZP_17300836.1| GTPase Der [Myroides odoratimimus CIP 103059]
gi|373910284|gb|EHQ42133.1| GTP-binding protein engA [Myroides odoratus DSM 2801]
gi|404610015|gb|EKB09373.1| GTPase Der [Myroides odoratimimus CIP 103059]
Length = 437
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 134/303 (44%), Positives = 178/303 (58%), Gaps = 39/303 (12%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W EF ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRREAIVDSVSGVTRDRNYGKSEWNGREFSVIDTGGYI--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K ++ E+ I RQ AIEE+ VIIF+VD + G
Sbjct: 62 KGSDDVFEE--------------------------EIRRQVALAIEEADVIIFVVDVEEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T D E+A L + K + +AVNK +S ++ + EF++LG + PI+ +SG+GT
Sbjct: 96 ITPMDAEVAKLLHRE--TKPVFVAVNKVDSGKR-MEDTYEFYNLGLGEIYPIAGMSGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V L + E E+ + E +P A+VGRPN GKSS +NAL+GEDR IV+ I+G
Sbjct: 153 GDLLDEVIKVLPEEEVREESEDGE--LPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAG 210
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT FT G F L+DTAGIR++ + E SV R+ RAI SDV L+
Sbjct: 211 TTRDAIDTRFT-QFGFDFNLVDTAGIRRKTKVKED---LEFYSVMRSIRAIEHSDVCILM 266
Query: 465 IEA 467
++A
Sbjct: 267 VDA 269
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 76/165 (46%), Gaps = 31/165 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G +R IV D G TRD + R +F LVDT G+
Sbjct: 177 LPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDAIDTRFTQFGFDFNLVDTAGI- 235
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ AIE S V I +VD
Sbjct: 236 ---RRKTKVKEDLEFYSVM-----------------------RSIRAIEHSDVCILMVDA 269
Query: 283 QAGLTAADEEIADWL-RKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G D+ I WL KN K I++ VNK + K + +F
Sbjct: 270 TRGFEGQDQNIF-WLAEKN--RKGIVILVNKWDLIDKDTLTSKQF 311
>gi|357043885|ref|ZP_09105571.1| GTP-binding protein engA [Prevotella histicola F0411]
gi|355367939|gb|EHG15365.1| GTP-binding protein engA [Prevotella histicola F0411]
Length = 437
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 181/310 (58%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRHAIVSDTAGTTRDRQYGKCQWNGREFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I +Q A EE+ +++FLVD + G
Sbjct: 63 KSD-DIFED--------------------------AIRKQVLVATEEADLVLFLVDAETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + +IL NK ++ + Q +EF+ LG P+ ISA +G GT
Sbjct: 96 VTDWDEDVAMILRRTKLP--VILVANKVDNSGE-YYQAAEFYKLGLGDPICISAATGGGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLDLV +LK + ++ ++++ IP A+VGRPN GKSSI+NA +GEDR IV+ I+G
Sbjct: 153 GDLLDLVLEKLK--DAPDESIDQD--IPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+I T +T G F L+DTAGIR++ + E SV R+ R+I SDV L+
Sbjct: 209 TTRDSIYTRYT-KFGFDFYLVDTAGIRRKNKVTED---LEFYSVMRSIRSIENSDVCILM 264
Query: 465 IEAMACITEQ 474
++A I Q
Sbjct: 265 LDATRGIEAQ 274
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 29/150 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT G+
Sbjct: 175 IPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYTKFGFDFYLVDTAGI- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ +IE S V I ++D
Sbjct: 234 ---RRKNKVTEDLEFYSVM-----------------------RSIRSIENSDVCILMLDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNK 312
G+ A D I +++N +K +++ VNK
Sbjct: 268 TRGIEAQDMNIFQLIQRN--NKSLVVVVNK 295
>gi|326797802|ref|YP_004315621.1| GTP-binding protein engA [Sphingobacterium sp. 21]
gi|326548566|gb|ADZ76951.1| GTP-binding protein engA [Sphingobacterium sp. 21]
Length = 433
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 182/310 (58%), Gaps = 43/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS L+NRL +AIV D GVTRDR YG++ W F ++DTGG ++ S
Sbjct: 5 IAIVGRPNVGKSTLYNRLTESRKAIVDDMSGVTRDRHYGQAEWVGKTFTVIDTGGYVHGS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
ED+ EAA I Q AIEE+ VI+F+VD G
Sbjct: 65 -------EDIF---------------EAA-------IREQVLIAIEEASVILFMVDVTVG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T D++IA LR++ +K + + VNK + + S F++LG + IS+++G+GT
Sbjct: 96 ITDLDDDIAHLLRRS--NKPVFVVVNKVDHHQLH-TDASTFYALGLGEIYNISSMTGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GELLD V +V+ EEE +P AIVGRPNVGKSS +NAL+G++R IV+PI+G
Sbjct: 153 GELLDEVVKHFDEVQ------EEEGSLPKYAIVGRPNVGKSSFINALIGKERNIVTPIAG 206
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+I + G +F LIDTAG+R++ + + E SV R +A+ +DVV L+
Sbjct: 207 TTRDSIQIHY-NQFGHEFMLIDTAGLRRKTKVKEN---IEFYSVMRTIKALEEADVVILM 262
Query: 465 IEAMACITEQ 474
I+A + Q
Sbjct: 263 IDATEGLESQ 272
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 72/150 (48%), Gaps = 29/150 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP+ AIVGRPNVGKS+ N L+G R IV G TRD + HEFML+DT G+
Sbjct: 173 LPKYAIVGRPNVGKSSFINALIGKERNIVTPIAGTTRDSIQIHYNQFGHEFMLIDTAGLR 232
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+K + NI E ++ TI A+EE+ V+I ++D
Sbjct: 233 RKTKVKENI-EFYSVMRTI--------------------------KALEEADVVILMIDA 265
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNK 312
GL + D I KN K ++L VNK
Sbjct: 266 TEGLESQDVNIFHLAEKN--KKGVVLLVNK 293
>gi|315651881|ref|ZP_07904884.1| ribosome-associated GTPase EngA [Lachnoanaerobaculum saburreum DSM
3986]
gi|315485883|gb|EFU76262.1| ribosome-associated GTPase EngA [Lachnoanaerobaculum saburreum DSM
3986]
Length = 443
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 183/312 (58%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS LFN + G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 4 PVVAIIGRPNVGKSTLFNAIAGEPISIVKDTPGVTRDRIYADCTWLDMNFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P E++ + M E QA AIE + VI+F+ D +
Sbjct: 62 ----EP----------------------ESSDVILSQMRE-QAEIAIETADVIVFITDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++ D LRK+ K ++LAVNK +S K V EF++LG P+ ISA S
Sbjct: 95 QGLVDSDSKVCDMLRKSR--KPVVLAVNKVDSIAKFGNDVYEFYNLGIGDPVAISAASRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K +G E EE++ P IAIVG+PNVGKSSI+N L G++R IVS I
Sbjct: 153 GIGDLLDAVAVHFKS-KGNES--EEDDDRPRIAIVGKPNVGKSSIINRLTGQNRVIVSDI 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT + Q++ IDTAG+R+++ + E S+ R A+ R+DVV
Sbjct: 210 AGTTRDAIDTVVVNNK-QEYIFIDTAGLRRKSKVKED---IERYSIIRTVTAVERADVVI 265
Query: 463 LVIEAMACITEQ 474
LVI+A +TEQ
Sbjct: 266 LVIDASEGVTEQ 277
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 95/197 (48%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVG+PNVGKS++ NRL G NR IV D G TRD + + E++ +DT G+
Sbjct: 179 PRIAIVGKPNVGKSSIINRLTGQNRVIVSDIAGTTRDAIDTVVVNNKQEYIFIDTAGLRR 238
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + +I E +I T+ A+E + V+I ++D
Sbjct: 239 KSKVKEDI-ERYSIIRTV--------------------------TAVERADVVILVIDAS 271
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP----L 334
G+T D +IA K II+AVNK + K V E+ + L F P +
Sbjct: 272 EGVTEQDAKIAGIAHDR--GKGIIVAVNKWDLIEKNNKTVYEYTNDIKRVLSFMPYAEFI 329
Query: 335 PISAISGTGTGELLDLV 351
ISA+SG +L +L+
Sbjct: 330 FISALSGQRLQKLFELI 346
>gi|86142085|ref|ZP_01060609.1| GTP-binding protein EngA [Leeuwenhoekiella blandensis MED217]
gi|85831648|gb|EAQ50104.1| GTP-binding protein EngA [Leeuwenhoekiella blandensis MED217]
Length = 433
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 133/304 (43%), Positives = 181/304 (59%), Gaps = 44/304 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG++ W EF ++DTGG +
Sbjct: 4 VAIVGRPNVGKSTFFNRLIQRREAIVDSVSGVTRDRHYGKTDWNGKEFSVIDTGGYV--- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ +I E+ I++Q AI+E+ IIF+VD +AG
Sbjct: 61 RGSDDIFEE--------------------------QIDKQVELAIDEADAIIFMVDVEAG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T DE++A LR+ K + L VNK ++ + V EF++LG I++ISG+GT
Sbjct: 95 VTGMDEDVATLLRRQ--SKPVFLVVNKVDNAMRQDDAV-EFYNLGLGEYYTIASISGSGT 151
Query: 345 GELLDLVCSEL-KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
G+LLD V L +KVE EEE+ +P A+VGRPN GKSS +NAL+GEDR IV+ I+
Sbjct: 152 GDLLDAVVEVLPEKVE------EEESVLPRFAVVGRPNAGKSSFINALIGEDRYIVTDIA 205
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRDAIDT++ G +F L+DTAGIR+++ + E SV R+ RAI DV L
Sbjct: 206 GTTRDAIDTKYN-RFGFEFNLVDTAGIRRKSKVKED---LEFYSVMRSVRAIEHCDVCLL 261
Query: 464 VIEA 467
V++A
Sbjct: 262 VVDA 265
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 88/206 (42%), Gaps = 35/206 (16%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +LPR A+VGRPN GKS+ N L+G +R IV D G TRD + + EF LVDT
Sbjct: 170 ESVLPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDAIDTKYNRFGFEFNLVDTA 229
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ SK + EDL + + ++ AIE V + +
Sbjct: 230 GIRRKSK----VKEDLEFYSVM-----------------------RSVRAIEHCDVCLLV 262
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFSP 333
VD G + I WL + K I++ +NK + K + EF F+
Sbjct: 263 VDATRGFDGQVQNIF-WLAER-NRKGIVILINKWDLVEKENKTIREFEKHIRAQIEPFTD 320
Query: 334 LPISAISGTGTGELLDLVCSELKKVE 359
+PI IS + + + +K E
Sbjct: 321 VPIVFISALTKQRVYKAIETAVKVYE 346
>gi|335048450|ref|ZP_08541470.1| ribosome biogenesis GTPase Der [Parvimonas sp. oral taxon 110 str.
F0139]
gi|333758250|gb|EGL35808.1| ribosome biogenesis GTPase Der [Parvimonas sp. oral taxon 110 str.
F0139]
Length = 441
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 184/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P V +VGRPNVGKS LFN+L+ AI D PGVTRDR+Y + W F+L DTGG+
Sbjct: 4 PLVCVVGRPNVGKSTLFNKLINKRIAITEDTPGVTRDRLYQDAEWQNKHFILCDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+PN +D+ + I+ QA A+E + VI+F+VDG+
Sbjct: 62 ----EPN-SDDIIL----------------------QKIKAQADVAMENADVILFVVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPI-SAISGT 342
+GL D EI+++LR+ K ++LAVNK ++ K +V EF+ LGF L I SA G
Sbjct: 95 SGLMDEDREISNYLRRT--KKPVVLAVNKVDT-HKMPAEVYEFYELGFENLNIISATQGF 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + E + + T EE+ + IA++G+PNVGKSS++N ++GE+R IVS I
Sbjct: 152 GLGDLLDEIIKEFPENKYTG----EEDEVTKIALIGKPNVGKSSLMNRILGEERMIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+ID+ +G+ + DTAG+R++ I + E SV R A+ RSD+
Sbjct: 208 AGTTRDSIDSR-VEIDGKTYIFTDTAGLRRKKNITEN---LERYSVVRTLNAVERSDIAI 263
Query: 463 LVIEAMACITEQ 474
L+I+A +TEQ
Sbjct: 264 LLIDATEGVTEQ 275
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E + ++A++G+PNVGKS+L NR++G R IV D G TRD + R ++ DT
Sbjct: 173 EDEVTKIALIGKPNVGKSSLMNRILGEERMIVSDIAGTTRDSIDSRVEIDGKTYIFTDTA 232
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + NI E+L +V R + +ER S + I L
Sbjct: 233 GL----RRKKNITENL---------------ERYSVVRTLNAVER--------SDIAILL 265
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSPL 334
+D G+T D ++ + ++ +K +I+AVNK + K F L F P
Sbjct: 266 IDATEGVTEQDTKVIGFAKE--QNKSLIIAVNKWDLIVKDNKTYKAFEDDIRTKLSFVPY 323
Query: 335 PISAISGTGTGELLDLVCSELK 356
TG+ +D + +K
Sbjct: 324 AQLVFISVKTGQRIDKLFEAIK 345
>gi|419718327|ref|ZP_14245650.1| ribosome-associated GTPase EngA [Lachnoanaerobaculum saburreum
F0468]
gi|383305498|gb|EIC96860.1| ribosome-associated GTPase EngA [Lachnoanaerobaculum saburreum
F0468]
Length = 443
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 182/312 (58%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS LFN + G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 4 PVVAIIGRPNVGKSTLFNAIAGEPISIVKDTPGVTRDRIYADCTWLDMNFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P E++ + M E QA AIE + VI+F+ D +
Sbjct: 62 ----EP----------------------ESSDVILSQMRE-QAEIAIETADVIVFITDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++ D LRK+ K ++LAVNK +S K V EF++LG P+ ISA S
Sbjct: 95 QGLVDSDSKVCDMLRKSR--KPVVLAVNKVDSIAKFGNDVYEFYNLGIGDPVAISAASRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V K +G E EE++ P IAIVG+PNVGKSSI+N L G++R IVS I
Sbjct: 153 GIGDLLDAVAVHFKS-KGNES--EEDDDRPRIAIVGKPNVGKSSIINRLTGQNRVIVSDI 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT Q++ IDTAG+R+++ + E S+ R A+ R+DVV
Sbjct: 210 AGTTRDAIDTVVVNNR-QEYVFIDTAGLRRKSKVKED---IERYSIIRTVTAVERADVVI 265
Query: 463 LVIEAMACITEQ 474
LVI+A +TEQ
Sbjct: 266 LVIDAREGVTEQ 277
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 95/197 (48%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVG+PNVGKS++ NRL G NR IV D G TRD + E++ +DT G+
Sbjct: 179 PRIAIVGKPNVGKSSIINRLTGQNRVIVSDIAGTTRDAIDTVVVNNRQEYVFIDTAGLRR 238
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + +I E +I T+ A+E + V+I ++D +
Sbjct: 239 KSKVKEDI-ERYSIIRTV--------------------------TAVERADVVILVIDAR 271
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP----L 334
G+T D +IA K II+AVNK + K V E+ + L F P +
Sbjct: 272 EGVTEQDAKIAGIAHDR--GKGIIVAVNKWDLIEKNNKTVYEYTNDIKRVLSFMPYAEFI 329
Query: 335 PISAISGTGTGELLDLV 351
ISA+SG +L +L+
Sbjct: 330 FISALSGQRLQKLFELI 346
>gi|389575878|ref|ZP_10165906.1| ribosome-associated GTPase EngA [Eubacterium cellulosolvens 6]
gi|389311363|gb|EIM56296.1| ribosome-associated GTPase EngA [Eubacterium cellulosolvens 6]
Length = 443
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 180/312 (57%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNALAGERISIVKDTPGVTRDRIYADVTWLNHEFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ D+ + + QA A+E + VIIF+ D +
Sbjct: 62 ----EPD-SSDIIL----------------------KQMREQAVIAMETADVIIFITDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD ++A LRK+ K ++LAVNK + + + + EF++LG P ISA
Sbjct: 95 QGLVDADLQVATMLRKS--KKPVVLAVNKVDDFKTQEIGIYEFYNLGIGEPHAISAEGKM 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD+V S EG + E++N P IAIVG+PNVGKSSI+N L+G +R IVS I
Sbjct: 153 GLGDLLDVVISHFP--EGAGENEEDDN--PKIAIVGKPNVGKSSIINKLLGTNRVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT G+ + IDTAG+R+++ I E S+ R A+ R D+
Sbjct: 209 AGTTRDAIDT-VIKRNGKDYTFIDTAGLRRKSKIKEE---LERYSIVRTVAAVERCDIAV 264
Query: 463 LVIEAMACITEQ 474
+VI+A+ ITEQ
Sbjct: 265 VVIDAVEGITEQ 276
>gi|188586247|ref|YP_001917792.1| small GTP-binding protein [Natranaerobius thermophilus JW/NM-WN-LF]
gi|226741142|sp|B2A4M9.1|DER_NATTJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|179350934|gb|ACB85204.1| small GTP-binding protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 440
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 131/310 (42%), Positives = 184/310 (59%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKSALFNR+VG +IV D PGVTRDR+ G+ W H F L+DTGG+ +
Sbjct: 7 VALVGRPNVGKSALFNRIVGQRISIVDDTPGVTRDRIDGKGEWSGHSFNLIDTGGIFD-- 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ +I++ + I QA AI+E+ VI+F+ DG+ G
Sbjct: 65 -EEDDILKQVVI---------------------------QAEVAIDEADVIVFVTDGRDG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T ADEE+A LRK K +++AVNK E EF+ LGF + ISA+ GT T
Sbjct: 97 ITPADEEVAATLRKT--KKPVLVAVNKSEGNYD--QYAMEFYQLGFEQVISISALHGTNT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD + L + E E+L E+ I ++++GRPNVGKSS++N ++ ++R IVS + G
Sbjct: 153 GQLLDEIVELLPEQE-YEELNYHEDDI-MLSVIGRPNVGKSSLINKILNKERLIVSNMPG 210
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT E QK+ IDTAG+RK++ I E SV R+ + + RS++ L+
Sbjct: 211 TTRDAIDT-VIEREDQKYVFIDTAGLRKKSKIDER---LEKYSVIRSIKGMERSNIALLL 266
Query: 465 IEAMACITEQ 474
I+ I EQ
Sbjct: 267 IDVTKGILEQ 276
>gi|18310737|ref|NP_562671.1| GTP-binding protein EngA [Clostridium perfringens str. 13]
gi|110798819|ref|YP_696441.1| GTP-binding protein EngA [Clostridium perfringens ATCC 13124]
gi|110803315|ref|YP_699041.1| GTP-binding protein EngA [Clostridium perfringens SM101]
gi|168207282|ref|ZP_02633287.1| putative GTP-binding protein Era [Clostridium perfringens E str.
JGS1987]
gi|168210612|ref|ZP_02636237.1| putative GTP-binding protein Era [Clostridium perfringens B str.
ATCC 3626]
gi|168214232|ref|ZP_02639857.1| putative GTP-binding protein Era [Clostridium perfringens CPE str.
F4969]
gi|168217042|ref|ZP_02642667.1| putative GTP-binding protein Era [Clostridium perfringens NCTC
8239]
gi|169342731|ref|ZP_02863772.1| putative GTP-binding protein Era [Clostridium perfringens C str.
JGS1495]
gi|182625851|ref|ZP_02953617.1| putative GTP-binding protein Era [Clostridium perfringens D str.
JGS1721]
gi|422346425|ref|ZP_16427339.1| GTPase Der [Clostridium perfringens WAL-14572]
gi|422874675|ref|ZP_16921160.1| GTP-binding protein Der [Clostridium perfringens F262]
gi|26006720|sp|Q8XJK1.1|DER_CLOPE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123148666|sp|Q0TPJ9.1|DER_CLOP1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123341699|sp|Q0SS66.1|DER_CLOPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|18145418|dbj|BAB81461.1| probable GTP binding protein [Clostridium perfringens str. 13]
gi|110673466|gb|ABG82453.1| ribosome-associated GTPase EngA [Clostridium perfringens ATCC
13124]
gi|110683816|gb|ABG87186.1| ribosome-associated GTPase EngA [Clostridium perfringens SM101]
gi|169299237|gb|EDS81307.1| putative GTP-binding protein Era [Clostridium perfringens C str.
JGS1495]
gi|170661368|gb|EDT14051.1| putative GTP-binding protein Era [Clostridium perfringens E str.
JGS1987]
gi|170711316|gb|EDT23498.1| putative GTP-binding protein Era [Clostridium perfringens B str.
ATCC 3626]
gi|170714259|gb|EDT26441.1| putative GTP-binding protein Era [Clostridium perfringens CPE str.
F4969]
gi|177908885|gb|EDT71377.1| putative GTP-binding protein Era [Clostridium perfringens D str.
JGS1721]
gi|182380862|gb|EDT78341.1| putative GTP-binding protein Era [Clostridium perfringens NCTC
8239]
gi|373225970|gb|EHP48297.1| GTPase Der [Clostridium perfringens WAL-14572]
gi|380304316|gb|EIA16605.1| GTP-binding protein Der [Clostridium perfringens F262]
Length = 438
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 135/313 (43%), Positives = 188/313 (60%), Gaps = 43/313 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN+L G +IV D PGVTRDR+Y S W +F ++DTGG+
Sbjct: 4 PIVAMVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAESEWLNRKFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + + V +M RQA AIE + VI+F+VDG+
Sbjct: 62 ----EPE-------------------SSDIIVKQM----RRQAQIAIEMADVIVFVVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS-EFWSLGFS-PLPISAISG 341
GLTAAD+E+A LRK+ K ++L VNK + R + + S EF++LG P+ ISA G
Sbjct: 95 EGLTAADQEVAQMLRKS--KKPVVLVVNKID--RLALEENSYEFYNLGIGDPITISASQG 150
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G G++LD E+ K EE++ IA++G+PNVGKSS++N L+GE+R IVS
Sbjct: 151 LGLGDMLD----EVVKYFNDPSEDEEDDEYIRIAMIGKPNVGKSSLINRLLGEERVIVSN 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
+ GTTRD+ID+ +G KF L+DTAG+R+++ + E SV R + AI ++DV
Sbjct: 207 VPGTTRDSIDSYLETEDG-KFILVDTAGLRRKSKVKEE---IERYSVIRTYAAIEKADVA 262
Query: 462 ALVIEAMACITEQ 474
LVI+A ITEQ
Sbjct: 263 ILVIDAEQGITEQ 275
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 38/193 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++G+PNVGKS+L NRL+G R IV + PG TRD + + +F+LVDT G+
Sbjct: 178 RIAMIGKPNVGKSSLINRLLGEERVIVSNVPGTTRDSIDSYLETEDGKFILVDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I I T AAIE++ V I ++D +
Sbjct: 238 SKVKEEIERYSVIRT---------------------------YAAIEKADVAILVIDAEQ 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----LP 335
G+T DE+I + + M+K I++ VNK + K +S + L F P L
Sbjct: 271 GITEQDEKIIGYAHE--MNKAIMVVVNKWDLIEKDDKTLSNYQKDLQQKLKFMPYAKYLF 328
Query: 336 ISAISGTGTGELL 348
ISA++G ++L
Sbjct: 329 ISALTGQRVHKIL 341
>gi|160946385|ref|ZP_02093594.1| hypothetical protein PEPMIC_00345 [Parvimonas micra ATCC 33270]
gi|158447501|gb|EDP24496.1| ribosome biogenesis GTPase Der [Parvimonas micra ATCC 33270]
Length = 441
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 184/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P V +VGRPNVGKS LFN+L+ AI D PGVTRDR+Y + W F+L DTGG+
Sbjct: 4 PLVCVVGRPNVGKSTLFNKLINKRIAITEDTPGVTRDRLYQDAEWQNKHFILCDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+PN +D+ + I+ QA A+E + VI+F+VDG+
Sbjct: 62 ----EPN-SDDIIL----------------------QKIKAQADVAMENADVILFVVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPI-SAISGT 342
+GL D EI+++LR+ K ++LAVNK ++ K +V EF+ LGF L I SA G
Sbjct: 95 SGLMDEDREISNYLRRT--KKPVVLAVNKVDT-HKMPAEVYEFYELGFENLNIISATQGF 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + E + + T EE+ + IA++G+PNVGKSS++N ++GE+R IVS I
Sbjct: 152 GLGDLLDEIIKEFPENKYTG----EEDEVTKIALIGKPNVGKSSLMNRILGEERMIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+ID+ +G+ + DTAG+R++ I + E SV R A+ RSD+
Sbjct: 208 AGTTRDSIDSR-VEIDGKTYIFTDTAGLRRKRNITEN---LERYSVVRTLNAVERSDIAI 263
Query: 463 LVIEAMACITEQ 474
L+I+A +TEQ
Sbjct: 264 LLIDATEGVTEQ 275
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E + ++A++G+PNVGKS+L NR++G R IV D G TRD + R ++ DT
Sbjct: 173 EDEVTKIALIGKPNVGKSSLMNRILGEERMIVSDIAGTTRDSIDSRVEIDGKTYIFTDTA 232
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + NI E+L +V R + +ER S + I L
Sbjct: 233 GL----RRKRNITENL---------------ERYSVVRTLNAVER--------SDIAILL 265
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSPL 334
+D G+T D ++ + ++ +K +I+AVNK + K F L F P
Sbjct: 266 IDATEGVTEQDTKVIGFAKE--QNKALIIAVNKWDLIVKDNKTYKAFEDDIRTKLSFVPY 323
Query: 335 PISAISGTGTGELLDLVCSELK 356
TG+ +D + +K
Sbjct: 324 AQLVFISVKTGQRIDKLFEAIK 345
>gi|338811521|ref|ZP_08623735.1| GTP-binding protein Der [Acetonema longum DSM 6540]
gi|337276488|gb|EGO64911.1| GTP-binding protein Der [Acetonema longum DSM 6540]
Length = 442
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 189/312 (60%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKIAKKRVSIVDDLPGVTRDRLYWDAEWLGHEFTMIDTGGIE- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S IM + + RQA AIEE+ VI+F+VD +
Sbjct: 63 -VDSNDFIM---------------------------ASVRRQAALAIEEADVILFVVDSK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
G+T ADEE+A LR + +K +ILAVNK +S + V EF+ LG PL +SA +
Sbjct: 95 TGITTADEEVAALLR--HANKPVILAVNKVDSIKDS-EAVYEFYGLGLGEPLAVSAANLL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V +E + E E+++RI IA++GRPNVGKSS++N L+G++R IVS I
Sbjct: 152 NLGDLLDAVVAEFPPEQEAE---EQDDRIK-IAVIGRPNVGKSSLVNGLLGQERVIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT +G + LIDTAG+RK+A I + E SV R+ A+ R+DVV
Sbjct: 208 PGTTRDAIDTVLE-KDGVSYVLIDTAGMRKKAKI--EDESIERYSVVRSLSAVERADVVL 264
Query: 463 LVIEAMACITEQ 474
+V++A+ +TEQ
Sbjct: 265 MVLDAVDRVTEQ 276
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 10/105 (9%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI--DTEFTGPEGQKFRLIDT 427
R P +AIVGRPNVGKS++ N + + +IV + G TRD + D E+ G E F +IDT
Sbjct: 2 RKPIVAIVGRPNVGKSTLFNKIAKKRVSIVDDLPGVTRDRLYWDAEWLGHE---FTMIDT 58
Query: 428 AGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACIT 472
GI S A +A AI +DV+ V+++ IT
Sbjct: 59 GGIE-----VDSNDFIMASVRRQAALAIEEADVILFVVDSKTGIT 98
>gi|346314466|ref|ZP_08855986.1| GTP-binding protein engA [Erysipelotrichaceae bacterium 2_2_44A]
gi|345906358|gb|EGX76085.1| GTP-binding protein engA [Erysipelotrichaceae bacterium 2_2_44A]
Length = 436
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 131/310 (42%), Positives = 179/310 (57%), Gaps = 43/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNR++G ++IV D PGVTRDR+YG++ W EF ++DTG
Sbjct: 6 VAIVGRPNVGKSTIFNRIIGERKSIVEDTPGVTRDRIYGKAEWLTREFRVIDTG------ 59
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
GI LA ++ + I Q AI+E+ I+F+V G+ G
Sbjct: 60 -------------------GIQLANQD-----FQTEINMQVEIAIDEADCIVFVVSGKDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT DE +A L K K +ILAVNK + + + EF+SLG PL +S G G
Sbjct: 96 LTHDDEYVARLLHKT--KKPVILAVNKVDDFAQN-DAIYEFYSLGLGDPLAVSGAHGIGI 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G++LD V L + E E + + ++GRPNVGKSS++N+++ ++R IVS I G
Sbjct: 153 GDVLDAVIHALPEKEKN-----EYDGMTKFCVIGRPNVGKSSLVNSILNQERVIVSNIEG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT F EG+++ +IDTAGIRKR + + E SV RA AI RSDVV +V
Sbjct: 208 TTRDAIDTPFK-REGKEYVVIDTAGIRKRGKVYEN---IEKYSVLRAMSAIERSDVVLVV 263
Query: 465 IEAMACITEQ 474
I+ I +Q
Sbjct: 264 IDGEKGIRDQ 273
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 39/181 (21%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGV 221
+ + ++GRPNVGKS+L N ++ R IV + G TRD + F E E++++DT G+
Sbjct: 174 MTKFCVIGRPNVGKSSLVNSILNQERVIVSNIEGTTRDAI-DTPFKREGKEYVVIDTAGI 232
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
K NI + +V R A +AIE S V++ ++D
Sbjct: 233 RKRGKVYENI-------------------EKYSVLR--------AMSAIERSDVVLVVID 265
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP 333
G+ G+ D+ +A + + K +++ NK ++ K + ++F L ++P
Sbjct: 266 GEKGIRDQDKHVAGYAHE--AGKGVVIVYNKWDAVEKDEQTMHTIEKEIRAQFLYLSYAP 323
Query: 334 L 334
+
Sbjct: 324 I 324
>gi|358063993|ref|ZP_09150588.1| GTP-binding protein engA [Clostridium hathewayi WAL-18680]
gi|356697779|gb|EHI59344.1| GTP-binding protein engA [Clostridium hathewayi WAL-18680]
Length = 442
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 184/312 (58%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN + G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNVIAGDTISIVKDTPGVTRDRIYADCTWLDMNFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ T + +++M QA AI + VIIF+VD +
Sbjct: 62 ----EPD-------------------TNDIILSQM----REQAEIAIATADVIIFIVDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD +AD LRK+ K ++LAVNK +S +K + EF++LG P+ +SA S
Sbjct: 95 QGLVDADFRVADMLRKS--KKPMVLAVNKVDSFQKFGNDIYEFYNLGLGDPIAVSAASRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V +E ED EE+ P IA+VG+PNVGKSSI+N L+GE+R IVS I
Sbjct: 153 GIGDLLDEVAKHF-DMEQVED---EEDERPRIAVVGKPNVGKSSIINKLIGENRVIVSNI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DTE G ++ IDTAG+R++ I E S+ R A+ R+DVV
Sbjct: 209 AGTTRDAVDTEVV-HNGTEYVFIDTAGLRRKNKIKEE---LERYSIIRTVTAVERADVVV 264
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 265 VVIDASEGVTEQ 276
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+A+VG+PNVGKS++ N+L+G NR IV + G TRD + E++ +DT G+
Sbjct: 178 PRIAVVGKPNVGKSSIINKLIGENRVIVSNIAGTTRDAVDTEVVHNGTEYVFIDTAGL-- 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E+L + I + A+E + V++ ++D
Sbjct: 236 --RRKNKIKEELERYSII-----------------------RTVTAVERADVVVVVIDAS 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSPLP--- 335
G+T D +IA + K +I+AVNK ++ K + EF +L F
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGVIIAVNKWDAIEKNDKTIYEFTRKVRDTLSFMQYAEII 328
Query: 336 -ISAISGTGTGELLDLV 351
ISA++G +L + +
Sbjct: 329 FISALTGQRLNKLFETI 345
>gi|326204998|ref|ZP_08194849.1| ribosome-associated GTPase EngA [Clostridium papyrosolvens DSM
2782]
gi|325984864|gb|EGD45709.1| ribosome-associated GTPase EngA [Clostridium papyrosolvens DSM
2782]
Length = 441
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 131/312 (41%), Positives = 182/312 (58%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS FN L G +IV D PGVTRDR+Y W +F L+DTGG+
Sbjct: 4 PVVAVVGRPNVGKSTFFNYLAGSRISIVEDTPGVTRDRIYTEIEWRSTKFTLIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S ED+ + ++RQA AIE + VI+F+VDG+
Sbjct: 64 YS-------EDIIM----------------------QQMKRQAEIAIETADVIVFMVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP-ISAISGT 342
G+TA D+E+A LRK+ K ++L VNK + + V EF++LG + IS++ G
Sbjct: 95 DGMTATDKEVATMLRKS--QKPVVLCVNKVDRIGEPPPDVYEFYNLGMGDMQIISSVHGL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD + + EE+ + +A+VG+PN GKSS++N+++GE+R IVS I
Sbjct: 153 GMGDLLDAIFEHFP----EDTDAEEDEDVIKVAVVGKPNAGKSSLINSILGENRVIVSNI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT +GQK+ IDTAGIRKR+ I T E S R++ AI R+DV
Sbjct: 209 PGTTRDAIDTHVE-MDGQKYTFIDTAGIRKRSKI---NETIEKYSTIRSWTAIERADVCL 264
Query: 463 LVIEAMACITEQ 474
++I+A +TEQ
Sbjct: 265 IMIDAEDGVTEQ 276
>gi|210633108|ref|ZP_03297675.1| hypothetical protein COLSTE_01584 [Collinsella stercoris DSM 13279]
gi|210159262|gb|EEA90233.1| ribosome biogenesis GTPase Der [Collinsella stercoris DSM 13279]
Length = 444
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 184/312 (58%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS L NR+ + AIV GVTRDR Y + W EF LVDTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLVNRIAQTSDAIVHQSRGVTRDRSYHVADWNGREFTLVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P +D+ T+ I QA AA EE+ VI+F+VDG
Sbjct: 62 ----EPMKSDDVFATS----------------------IRDQALAAAEEAAVILFVVDGS 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T DE +A +RK + K L VNK ++P + + EF+SLG P+ +SA+ G
Sbjct: 96 VGVTEEDESVARMVRK--LKKPTFLLVNKLDNPARENDNLWEFYSLGVGDPVAVSALHGH 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD V + L + G ED E +AI+GRPN GKSS+ N ++G DR+IVS I
Sbjct: 154 GTGDLLDEVVALLPEDAGEED----EPDTLRVAIIGRPNAGKSSLFNKMIGNDRSIVSNI 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT +G+++R++DTAGIRK++ + + E S+ R RAI R+DV
Sbjct: 210 AGTTRDAIDT-VVERDGKRYRMVDTAGIRKKSTVYEN---IEYYSMVRGLRAIDRADVAL 265
Query: 463 LVIEAMACITEQ 474
LV++A +TEQ
Sbjct: 266 LVVDASTGVTEQ 277
>gi|291522204|emb|CBK80497.1| ribosome-associated GTPase EngA [Coprococcus catus GD/7]
Length = 441
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 129/312 (41%), Positives = 183/312 (58%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS LFN L G +IV D PGVTRDR+Y W +F ++DTGG+
Sbjct: 4 PIVAIIGRPNVGKSTLFNALAGQQISIVKDTPGVTRDRIYADVNWLNTQFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ DL + + + QA AIE + VIIFL D +
Sbjct: 62 ----EPS-TNDLILKS----------------------MREQAEIAIETADVIIFLTDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ AD ++A+ +R++ K ++L VNK ++ + + V EF++LG P+PIS S
Sbjct: 95 QGVVDADFQVANMIRRS--GKPVVLVVNKVDNFKTMMADVYEFYNLGLGDPMPISGNSKL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V K GT + EE + P +AIVG+PNVGKSS++N L GE+R IVS I
Sbjct: 153 GLGDMLDEVIKHFK--PGTAE--EEADERPHVAIVGKPNVGKSSLINKLTGENRVIVSNI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT G+++ IDTAG+R+++ I E S+ R A+ R++VV
Sbjct: 209 AGTTRDAIDT-VIKHNGKEYVFIDTAGLRRKSKIKED---IERYSIIRTVSAVERANVVV 264
Query: 463 LVIEAMACITEQ 474
L+I+A +TEQ
Sbjct: 265 LMIDAKEGVTEQ 276
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVG+PNVGKS+L N+L G NR IV + G TRD + E++ +DT G+
Sbjct: 178 PHVAIVGKPNVGKSSLINKLTGENRVIVSNIAGTTRDAIDTVIKHNGKEYVFIDTAGLRR 237
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + +I E +I T+ +A+E + V++ ++D +
Sbjct: 238 KSKIKEDI-ERYSIIRTV--------------------------SAVERANVVVLMIDAK 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSP----L 334
G+T D +IA + K +I+AVNK ++ K +++F L F P L
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGMIIAVNKWDAIEKDDKTMNKFTKDVREKLAFMPYAEML 328
Query: 335 PISAISGTGTGELLDLV 351
ISA +G +L D +
Sbjct: 329 FISAETGQRLPKLFDTI 345
>gi|88802177|ref|ZP_01117705.1| GTP-binding protein EngA [Polaribacter irgensii 23-P]
gi|88782835|gb|EAR14012.1| GTP-binding protein EngA [Polaribacter irgensii 23-P]
Length = 436
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 181/303 (59%), Gaps = 40/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRLV AIV GVTRDR YG+S W EF ++DTGG
Sbjct: 5 VAIVGRPNVGKSTLFNRLVQRRDAIVDSVSGVTRDRHYGKSDWNGKEFSVIDTGGY---- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+IG + I I +Q T AIEE+ +I+F+VD + G
Sbjct: 61 --------------SIGSDDI-----------FEEEIRKQVTLAIEEADIIVFVVDVEEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T D E+A LRK + K I + VNK ++ + V EF++LG IS+I+G+GT
Sbjct: 96 ITPMDAEVAKILRK--IKKPIFVTVNKVDNAMRDANAV-EFYNLGLGGYHTISSINGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD + +++ E DL E+ +P A+VGRPN GKSS +NAL+G+DR IV+ I+G
Sbjct: 153 GDLLDAIAAKMPAPEAV-DL--EQVELPRFAVVGRPNAGKSSFINALIGKDRNIVTNIAG 209
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+IDT++ G F L+DTAGIRK++ + E SV RA R+I +DV+ LV
Sbjct: 210 TTRDSIDTKY-NRFGFDFNLVDTAGIRKKSKVKED---LEFYSVMRAVRSIEYADVIILV 265
Query: 465 IEA 467
++A
Sbjct: 266 VDA 268
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 84/181 (46%), Gaps = 37/181 (20%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G +R IV + G TRD + + +F LVDT G+
Sbjct: 176 LPRFAVVGRPNAGKSSFINALIGKDRNIVTNIAGTTRDSIDTKYNRFGFDFNLVDTAGIR 235
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
SK + EDL + + +A +IE + VII +VD
Sbjct: 236 KKSK----VKEDLEFYSVM-----------------------RAVRSIEYADVIILVVDA 268
Query: 283 QAGLTAADEEIADWL-RKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFSPLP 335
G D+ I WL KN K +I+ +NK + K + +F ++ F+ +P
Sbjct: 269 TRGFEGQDQSIF-WLAEKN--RKGVIILINKWDLVEKETNTMRDFEAMVRKQVAPFTDIP 325
Query: 336 I 336
I
Sbjct: 326 I 326
>gi|224541354|ref|ZP_03681893.1| hypothetical protein CATMIT_00514 [Catenibacterium mitsuokai DSM
15897]
gi|224525688|gb|EEF94793.1| ribosome biogenesis GTPase Der [Catenibacterium mitsuokai DSM
15897]
Length = 435
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 183/312 (58%), Gaps = 47/312 (15%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGR NVGKS LFNR++G +IV D PGVTRDR+Y ++ W EF ++DTGG+
Sbjct: 6 VAIVGRANVGKSTLFNRIIGERVSIVEDVPGVTRDRIYAKASWLTKEFRIIDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
E A I+ QA AIEE+ VIIF+V+G+ G
Sbjct: 62 --------------------------ELKNADFTEQIKTQAEIAIEEADVIIFVVNGREG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCE--SPRKGIMQVSEFWSLGFS-PLPISAISGT 342
LT+ D +A L+K+ K ++LAVNK + + R I +F+SLG P+P+S+ G
Sbjct: 96 LTSEDNFVARMLQKS--GKPVLLAVNKIDDVAFRDNIY---DFYSLGIGEPIPVSSAHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V L E + E + ++I+GRPNVGKSS+ NA++GEDR IVS I
Sbjct: 151 GVGDLLDEVIRVLPDEEDEFEEDEIK-----VSIIGRPNVGKSSLTNAILGEDRVIVSNI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F +G K+R+IDTAG+RK+ + + E SV RA +A+ +SDV+
Sbjct: 206 EGTTRDAIDTAFE-KDGYKYRIIDTAGMRKKGKVYEN---IEKYSVLRALKAVEQSDVIL 261
Query: 463 LVIEAMACITEQ 474
V++ I EQ
Sbjct: 262 CVVDGERGIIEQ 273
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 38/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+V+I+GRPNVGKS+L N ++G +R IV + G TRD + +++ ++DT G+
Sbjct: 176 KVSIIGRPNVGKSSLTNAILGEDRVIVSNIEGTTRDAIDTAFEKDGYKYRIIDTAGMRKK 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K NI + +V R A A+E+S VI+ +VDG+
Sbjct: 236 GKVYENI-------------------EKYSVLR--------ALKAVEQSDVILCVVDGER 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP- 335
G+ D+ +A + + + K ++L VNK ++ K ++ +F L ++ +
Sbjct: 269 GIIEQDKHVAGYAHE--LGKSVVLVVNKWDAVTKDEKTMAKMEKNLREQFKYLDYARIAF 326
Query: 336 ISAISGTGTGELLDLVC 352
+SA+ L DL+
Sbjct: 327 VSALKKQRINTLFDLIV 343
>gi|344205138|ref|YP_004790280.1| GTP-binding protein engA [Mycoplasma putrefaciens KS1]
gi|343957061|gb|AEM68776.1| GTP-binding protein engA [Mycoplasma putrefaciens KS1]
Length = 435
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 186/310 (60%), Gaps = 43/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS+LFNR++ ++IV D+PGVTRDR+Y + W EF+++DTGG+
Sbjct: 6 VAIVGRPNVGKSSLFNRIIKEKKSIVEDKPGVTRDRIYANAEWLTREFIVIDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+E A+ I+ QA A++E+ VIIF++D Q G
Sbjct: 62 -----------------------TLKETEFAK---EIKIQAEIALQEADVIIFVLDSQQG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
+T D+ +A L K K +I+ NK + + GI + E+ SLGF + IS+ G G
Sbjct: 96 VTNEDKIVAKMLYKT--KKPVIVVANKYDKKQTGI-ESYEYLSLGFGQAIMISSTHGIGI 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V + + K + + +++I IAI+G+PNVGKSS++N+LVG++R IVS ++G
Sbjct: 153 GDLLDKVVNLMPK-----NQITNQDQITKIAIIGKPNVGKSSLINSLVGQERMIVSDLAG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TT DA+DT+F + + + LIDTAGIRK+A + E S R+ I SD+V L+
Sbjct: 208 TTLDAVDTKFKYHQ-KDYLLIDTAGIRKKAKVYQG---IEKYSYLRSLTTINNSDIVLLM 263
Query: 465 IEAMACITEQ 474
I+A + IT+Q
Sbjct: 264 IDASSPITDQ 273
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ ++AI+G+PNVGKS+L N LVG R IV D G T D + + + + +++L+DT G+
Sbjct: 174 ITKIAIIGKPNVGKSSLINSLVGQERMIVSDLAGTTLDAVDTKFKYHQKDYLLIDTAGI 232
>gi|409124107|ref|ZP_11223502.1| GTP-binding protein Der [Gillisia sp. CBA3202]
Length = 435
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/303 (43%), Positives = 183/303 (60%), Gaps = 42/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W F L+DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRREAIVDSVSGVTRDRHYGKSDWNGQVFSLIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K ++ E S I++Q AIEE+ IIF+VD ++G
Sbjct: 62 KGSDDVFE--------------------------SEIDKQVILAIEEADAIIFMVDVESG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T DE++A+ LRK DK ++LAVNK ++ ++ + EF++LG PI++ SG+GT
Sbjct: 96 ITGMDEDVANLLRKQ--DKPVLLAVNKVDNSKR-LENAVEFYNLGLGEFYPIASTSGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GELLD + L +VE E E+ +P A+VGRPN GKSS +NAL+GE+R IV+ ++G
Sbjct: 153 GELLDALVEVLPEVEDEE-----ESELPRFAVVGRPNAGKSSFINALIGEERYIVTDVAG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+IDT++ G +F L+DTAGIR+++ + E SV R+ RAI DV +V
Sbjct: 208 TTRDSIDTKYN-RYGFEFNLVDTAGIRRKSKVKED---LEFYSVMRSVRAIENCDVCLIV 263
Query: 465 IEA 467
++A
Sbjct: 264 LDA 266
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 67/150 (44%), Gaps = 29/150 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G R IV D G TRD + + EF LVDT G+
Sbjct: 174 LPRFAVVGRPNAGKSSFINALIGEERYIVTDVAGTTRDSIDTKYNRYGFEFNLVDTAGIR 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
SK + EDL + + ++ AIE V + ++D
Sbjct: 234 RKSK----VKEDLEFYSVM-----------------------RSVRAIENCDVCLIVLDA 266
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNK 312
G + I WL + K I++ VNK
Sbjct: 267 TRGFDGQVQNIF-WLAQR-NRKGIVILVNK 294
>gi|317504953|ref|ZP_07962902.1| ribosome-associated GTPase EngA [Prevotella salivae DSM 15606]
gi|315663945|gb|EFV03663.1| ribosome-associated GTPase EngA [Prevotella salivae DSM 15606]
Length = 437
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/311 (44%), Positives = 179/311 (57%), Gaps = 43/311 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL RAIV D G TRDR YG+ W EF +VDTGG V+N
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQSRRAIVSDTAGTTRDRQYGKCSWNSKEFSIVDTGGWVVN- 63
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+I ED I RQ A EE+ +++FLVD
Sbjct: 64 ---SDDIFED--------------------------AIRRQVLVATEEADLVLFLVDVST 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
G+T DE++A LR+ + +IL NK ++ + + +EF+ LG P ISA +G G
Sbjct: 95 GVTDWDEDVAMILRRAKLP--VILVANKVDNNSE-YYEAAEFYKLGLGEPQCISAATGGG 151
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
TG+LLDL+ +L + E E VEEE IP A+VGRPN GKSSI+NA +GEDR IV+ I+
Sbjct: 152 TGDLLDLIIDKLPQ-ENPES-VEEE--IPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIA 207
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRD+I T + G F L+DTAGIR++ ++ E SV R+ RAI SDV L
Sbjct: 208 GTTRDSIYTRY-DKFGFDFYLVDTAGIRRKNKVSED---LEFYSVMRSIRAIENSDVCIL 263
Query: 464 VIEAMACITEQ 474
+++A + Q
Sbjct: 264 MLDATRGVEAQ 274
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 74/153 (48%), Gaps = 29/153 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT
Sbjct: 172 EEEIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYDKFGFDFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIE S V I +
Sbjct: 232 GI----RRKNKVSEDLEFYSVM-----------------------RSIRAIENSDVCILM 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
+D G+ A D I ++KN K +++ VNK
Sbjct: 265 LDATRGVEAQDMNIFQLIQKN--KKSLVVVVNK 295
>gi|423132223|ref|ZP_17119873.1| GTPase Der [Myroides odoratimimus CCUG 12901]
gi|371639992|gb|EHO05601.1| GTPase Der [Myroides odoratimimus CCUG 12901]
Length = 436
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/303 (44%), Positives = 178/303 (58%), Gaps = 40/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W EF ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRRDAIVDSVSGVTRDRNYGKSEWNGREFSVIDTGGYI--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K ++ E I RQ + AIEE V+IF+VD + G
Sbjct: 62 KGSDDVFE--------------------------GEIRRQVSLAIEECDVVIFIVDVEEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T D E+A LRK K + +AVNK +S ++ + EF++LG + PI+ +SG+GT
Sbjct: 96 ITPMDAEVARLLRKE--TKPVFVAVNKVDSSKR-MDDTFEFYNLGLGEIYPIAGMSGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V + L + E E EE +P +VGRPN GKSS +NAL+GEDR IV+ I+G
Sbjct: 153 GDLLDAVVAALPEEEVRE---TEEEELPRFCVVGRPNAGKSSFINALIGEDRYIVTDIAG 209
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT FT G F L+DTAGIR+++ + E SV R+ RAI SDV L+
Sbjct: 210 TTRDAIDTRFT-QFGFDFNLVDTAGIRRKSKVKED---LEFYSVMRSVRAIEHSDVCILM 265
Query: 465 IEA 467
++A
Sbjct: 266 VDA 268
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 73/164 (44%), Gaps = 29/164 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR +VGRPN GKS+ N L+G +R IV D G TRD + R +F LVDT G+
Sbjct: 176 LPRFCVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDAIDTRFTQFGFDFNLVDTAGIR 235
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
SK + EDL + + ++ AIE S V I +VD
Sbjct: 236 RKSK----VKEDLEFYSVM-----------------------RSVRAIEHSDVCILMVDA 268
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G D+ I KN K +++ VNK + K M +F
Sbjct: 269 TRGFEGQDQNIFWLAEKN--RKGVVILVNKWDLVEKDTMTTKQF 310
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+AIVGRPNVGKS+ N L+ IV +SG TRD + + G++F +IDT G K
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRRDAIVDSVSGVTRDR-NYGKSEWNGREFSVIDTGGYIKG 63
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACIT 472
+ G +S+ AI DVV +++ IT
Sbjct: 64 SDDVFEGEIRRQVSL-----AIEECDVVIFIVDVEEGIT 97
>gi|284040067|ref|YP_003389997.1| ribosome-associated GTPase EngA [Spirosoma linguale DSM 74]
gi|283819360|gb|ADB41198.1| ribosome-associated GTPase EngA [Spirosoma linguale DSM 74]
Length = 435
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/310 (41%), Positives = 181/310 (58%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL +AI+ ++ GVTRDR YG + W + F ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTLFNRLTEQRQAIMDNQSGVTRDRHYGTAEWNDKYFTVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E + I Q AI+ES +++F+VD Q G
Sbjct: 62 ---------------VGSEDV-----------FEESIREQVEMAIQESTLLLFVVDTQTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE+ AD LR++ K + + NK E+ + +EF++LG P PIS+ +GTGT
Sbjct: 96 ITGLDEDFADVLRRS--KKPVYVVANKAETAERA-HTAAEFYALGLGDPYPISSQTGTGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V + G ED + IP IAI+GRPNVGKSS LN L G++R+IV+ I+G
Sbjct: 153 GDLLDEVVKHF-QTPGIED---PDAGIPRIAILGRPNVGKSSFLNVLTGQERSIVTNIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAI+T + G+ F L DTAGIR++A + S+ E SV R+ +A+ SDV ++
Sbjct: 209 TTRDAINTRYKA-YGKDFILTDTAGIRRKARVDSN---IEFYSVLRSIKAMEDSDVCIIL 264
Query: 465 IEAMACITEQ 474
++A + Q
Sbjct: 265 LDATRGLEAQ 274
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 29/160 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P+ +PR+AI+GRPNVGKS+ N L G R+IV + G TRD + R +F+L DT
Sbjct: 171 PDAGIPRIAILGRPNVGKSSFLNVLTGQERSIVTNIAGTTRDAINTRYKAYGKDFILTDT 230
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ ++ NI E ++ +I A+E+S V I
Sbjct: 231 AGIRRKARVDSNI-EFYSVLRSI--------------------------KAMEDSDVCII 263
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
L+D GL A D I K K +++ VNK ++ K
Sbjct: 264 LLDATRGLEAQDLNIIGQAIK--AKKGVVIMVNKWDAIEK 301
>gi|281425284|ref|ZP_06256197.1| hypothetical protein HMPREF0971_02256 [Prevotella oris F0302]
gi|299141484|ref|ZP_07034620.1| ribosome-associated GTPase EngA [Prevotella oris C735]
gi|281400577|gb|EFB31408.1| ribosome-associated GTPase EngA [Prevotella oris F0302]
gi|298576820|gb|EFI48690.1| ribosome-associated GTPase EngA [Prevotella oris C735]
Length = 437
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/310 (43%), Positives = 178/310 (57%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL RAIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQSRRAIVSDTAGTTRDRQYGKCSWNAKEFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I RQ A EE+ +++FLVD G
Sbjct: 63 KSD-DIFED--------------------------AIRRQVLVATEEADLVLFLVDVTTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + +IL NK ++ + + +EF+ LG P ISA +G GT
Sbjct: 96 VTDWDEDVATILRRAKLP--VILVANKVDNSSE-YYEAAEFYKLGIGEPQCISAATGGGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD++ +L + E E + E+ IP A+VGRPN GKSSI+NA +GEDR IV+ I+G
Sbjct: 153 GDLLDMIVDKLPQ-ENPETI---EDEIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+I T F G F L+DTAGIR++ ++ E SV R+ RAI SDV L+
Sbjct: 209 TTRDSIYTRF-DKFGFDFYLVDTAGIRRKNKVSED---LEFYSVMRSIRAIENSDVCILM 264
Query: 465 IEAMACITEQ 474
++A + Q
Sbjct: 265 LDATRGVEAQ 274
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 29/153 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT
Sbjct: 172 EDEIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRFDKFGFDFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIE S V I +
Sbjct: 232 GI----RRKNKVSEDLEFYSVM-----------------------RSIRAIENSDVCILM 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
+D G+ A D I ++KN +K +++ VNK
Sbjct: 265 LDATRGVEAQDMNIFQLIQKN--NKSLVVVVNK 295
>gi|167758361|ref|ZP_02430488.1| hypothetical protein CLOSCI_00701 [Clostridium scindens ATCC 35704]
gi|336423052|ref|ZP_08603190.1| GTP-binding protein engA [Lachnospiraceae bacterium 5_1_57FAA]
gi|167664258|gb|EDS08388.1| ribosome biogenesis GTPase Der [Clostridium scindens ATCC 35704]
gi|336006399|gb|EGN36434.1| GTP-binding protein engA [Lachnospiraceae bacterium 5_1_57FAA]
Length = 442
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 181/312 (58%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L GG +IV D PGVTRDR+Y W + +F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAGGMISIVKDTPGVTRDRIYADVNWLDKDFTLIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK D+ + S + QA AI+ + VIIF+ D +
Sbjct: 64 ESK-------DIIL----------------------SQMREQAQIAIDTADVIIFITDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR++ K ++L VNK ++ K + V EF++LG P+PISA S
Sbjct: 95 QGLVDSDSKVADMLRRS--GKPVVLVVNKVDNFDKFMPDVYEFYNLGIGDPVPISAASRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V + E+ E IAIVG+PNVGKSSI+N L+GE R IVS I
Sbjct: 153 GIGDMLDQVAEHFPEHGREEEEDERP----RIAIVGKPNVGKSSIINKLLGEQRVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT+ G+++ IDTAG+R++ I E S+ R A+ R+DVV
Sbjct: 209 AGTTRDAIDTDIV-YNGKEYVFIDTAGLRRKNKIKEE---LERYSIIRTVTAVERADVVL 264
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 265 IVIDATEGVTEQ 276
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVG+PNVGKS++ N+L+G R IV D G TRD + + E++ +DT G+
Sbjct: 180 IAIVGKPNVGKSSIINKLLGEQRVIVSDIAGTTRDAIDTDIVYNGKEYVFIDTAGL---- 235
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + I E+L + I + A+E + V++ ++D G
Sbjct: 236 RRKNKIKEELERYSII-----------------------RTVTAVERADVVLIVIDATEG 272
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP----LPI 336
+T D +IA + K II+ VNK ++ K + E+ S L F P + +
Sbjct: 273 VTEQDAKIAGIAHER--GKGIIIVVNKWDAIEKNDKTMREYDSEVRRVLSFMPYAEIMYV 330
Query: 337 SAISGTGTGELLD 349
SA +G +L D
Sbjct: 331 SAETGQRLNKLYD 343
>gi|283769536|ref|ZP_06342432.1| ribosome-associated GTPase EngA [Bulleidia extructa W1219]
gi|283103804|gb|EFC05190.1| ribosome-associated GTPase EngA [Bulleidia extructa W1219]
Length = 437
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/310 (43%), Positives = 178/310 (57%), Gaps = 43/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNRLVG +IV D PGVTRDR+YG + W + F ++DTGG
Sbjct: 6 VAIVGRPNVGKSTIFNRLVGERMSIVEDIPGVTRDRLYGSAEWAGNSFRVIDTGG----- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
I + P T I Q A+EE+ VI+ + DGQ G
Sbjct: 61 ---------------IQLANQPFQTE----------IRAQVDIAMEEADVILMVCDGQMG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+ D IA L+KN K ++LAVN+ + + ++ + EF+ LG P+ S I G G
Sbjct: 96 VMEDDRFIAGLLQKN--KKPVVLAVNRIDDQSR-MVNIYEFYELGLGDPMACSGIHGVGV 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G++LD C EL + D+ E + +A++G PNVGKSS++NA++ E+R IVS I G
Sbjct: 153 GDVLDR-CFEL--MPKRMDIPETKG--VKMAVIGEPNVGKSSLVNAILNEERAIVSNIQG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT FT EG+ + ++DTAGIRKR I S E SV RA RAI R DVV V
Sbjct: 208 TTRDAIDTPFTH-EGKPYIIVDTAGIRKRGKIYES---IEKYSVLRAMRAIERCDVVLFV 263
Query: 465 IEAMACITEQ 474
++ A I EQ
Sbjct: 264 MDGEAGIREQ 273
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 117/256 (45%), Gaps = 64/256 (25%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
++PE ++A++G PNVGKS+L N ++ RAIV + G TRD + +++V
Sbjct: 168 DIPETKGVKMAVIGEPNVGKSSLVNAILNEERAIVSNIQGTTRDAIDTPFTHEGKPYIIV 227
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DT G+ + + I E + + + +A AIE V+
Sbjct: 228 DTAGI----RKRGKIYESIEKYSVL-----------------------RAMRAIERCDVV 260
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWS 328
+F++DG+AG+ D+ +A + + M+K II+ VNK + K ++E F
Sbjct: 261 LFVMDGEAGIREQDKHVAGYAVE--MNKPIIIVVNKWDIVEKDDRTMNEFTQKVRDHFLY 318
Query: 329 LGFSPLP-ISAISGTGTGELLDLVCSELKKVEGTEDLVEE--ENRIPAIAIVGRPNVGKS 385
L ++P+ +SA + +L +V D++ E + RIP +
Sbjct: 319 LSYAPIVFVSAKTHQRVNRILPIV-----------DMILENAKRRIP------------T 355
Query: 386 SILNALVGEDRTIVSP 401
++LN +VG D I +P
Sbjct: 356 NVLNEVVG-DAQITTP 370
>gi|118443488|ref|YP_878327.1| GTP-binding protein EngA [Clostridium novyi NT]
gi|166224330|sp|A0Q125.1|DER_CLONN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|118133944|gb|ABK60988.1| GTP-binding protein engA [Clostridium novyi NT]
Length = 438
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 185/312 (59%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVDDMPGVTRDRIYAEAEWLNNNFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + VA+M RQA AIE + V++F+VDG+
Sbjct: 62 ----EPE-------------------NDDIIVAQM----RRQAQLAIEMADVVLFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A LRK K I+LAVNK + R+ + EF++LG P+PISA G
Sbjct: 95 QGLTDADREVAHMLRK--ASKSIVLAVNKIDR-RQLDDNIYEFYNLGLGDPMPISASQGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + EG ++ EEE+ IA++GRPNVGKSS++N ++GE++ IVS I
Sbjct: 152 GLGDLLDEVIEKFP--EG--NVEEEEDEYIRIAMIGRPNVGKSSLINKILGEEKHIVSNI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDA+D+ EG KF LIDTAG+R+++ I E S R +I +DV
Sbjct: 208 PGTTRDAVDSYVETEEG-KFVLIDTAGLRRKSKIKEQ---VERYSAVRTLASIENADVCI 263
Query: 463 LVIEAMACITEQ 474
L+I+A I EQ
Sbjct: 264 LMIDATEDIAEQ 275
>gi|365840247|ref|ZP_09381447.1| ribosome biogenesis GTPase Der [Anaeroglobus geminatus F0357]
gi|364562037|gb|EHM39908.1| ribosome biogenesis GTPase Der [Anaeroglobus geminatus F0357]
Length = 360
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 182/312 (58%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W EF L+DTGG+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVKKRVSIVEDIPGVTRDRIYFDAEWLGREFTLIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V K R+ + + QA AI E+ VI+++VDG+
Sbjct: 64 VDKDN----------------------------RIFTSMRYQAELAIREADVILYVVDGK 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ D EIA LR + K +IL VNK +S + M + EF+ LG P+ +SA++
Sbjct: 96 TGIQPQDREIASLLRSS--GKPVILVVNKIDSVEQE-MNIYEFYGLGLGDPVGVSAVNLM 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V +K+V + EE+ +A+VGRPNVGKSS+ NAL+G++R IVS +
Sbjct: 153 NLGDLLDEVLKNIKEVP----VREEDESAVHVALVGRPNVGKSSLTNALLGKERVIVSDM 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRD+IDT + +G +F LIDTAG+R++ I E SV RA RAI RSDV
Sbjct: 209 AGTTRDSIDTHWR-HDGTEFVLIDTAGMRRKGKI---DLPVERYSVVRALRAIDRSDVAV 264
Query: 463 LVIEAMACITEQ 474
LV++ +TEQ
Sbjct: 265 LVLDGTEGVTEQ 276
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 70/147 (47%), Gaps = 29/147 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS+L N L+G R IV D G TRD + EF+L+DT G+
Sbjct: 180 VALVGRPNVGKSSLTNALLGKERVIVSDMAGTTRDSIDTHWRHDGTEFVLIDTAGMRRKG 239
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K I L +V R A AI+ S V + ++DG G
Sbjct: 240 K-------------------IDLPVERYSVVR--------ALRAIDRSDVAVLVLDGTEG 272
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNK 312
+T D++IA ++ + K I+ VNK
Sbjct: 273 VTEQDKKIAGYIHE--AGKGCIIIVNK 297
>gi|373110947|ref|ZP_09525209.1| GTPase Der [Myroides odoratimimus CCUG 10230]
gi|371641823|gb|EHO07403.1| GTPase Der [Myroides odoratimimus CCUG 10230]
Length = 436
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/303 (44%), Positives = 178/303 (58%), Gaps = 40/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W EF ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRRDAIVDSVSGVTRDRNYGKSEWNGREFSVIDTGGYI--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K ++ E I RQ + AIEE V+IF+VD + G
Sbjct: 62 KGSDDVFE--------------------------GEIRRQVSLAIEECDVVIFVVDVEEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T D E+A LRK K + +AVNK +S ++ + EF++LG + PI+ +SG+GT
Sbjct: 96 ITPMDAEVARLLRKE--TKPVFVAVNKVDSSKR-MDDTFEFYNLGLGEIYPIAGMSGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V + L + E E EE +P +VGRPN GKSS +NAL+GEDR IV+ I+G
Sbjct: 153 GDLLDAVVAALPEEEVRE---TEEEELPRFCVVGRPNAGKSSFINALIGEDRYIVTDIAG 209
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT FT G F L+DTAGIR+++ + E SV R+ RAI SDV L+
Sbjct: 210 TTRDAIDTRFT-QFGFDFNLVDTAGIRRKSKVKED---LEFYSVMRSVRAIEHSDVCILM 265
Query: 465 IEA 467
++A
Sbjct: 266 VDA 268
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 73/164 (44%), Gaps = 29/164 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR +VGRPN GKS+ N L+G +R IV D G TRD + R +F LVDT G+
Sbjct: 176 LPRFCVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDAIDTRFTQFGFDFNLVDTAGIR 235
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
SK + EDL + + ++ AIE S V I +VD
Sbjct: 236 RKSK----VKEDLEFYSVM-----------------------RSVRAIEHSDVCILMVDA 268
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G D+ I KN K +++ VNK + K M +F
Sbjct: 269 TRGFEGQDQNIFWLAEKN--RKGVVILVNKWDLVEKDTMTTKQF 310
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+AIVGRPNVGKS+ N L+ IV +SG TRD + + G++F +IDT G K
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRRDAIVDSVSGVTRDR-NYGKSEWNGREFSVIDTGGYIKG 63
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACIT 472
+ G +S+ AI DVV V++ IT
Sbjct: 64 SDDVFEGEIRRQVSL-----AIEECDVVIFVVDVEEGIT 97
>gi|423136041|ref|ZP_17123686.1| GTPase Der [Myroides odoratimimus CIP 101113]
gi|423329809|ref|ZP_17307615.1| GTPase Der [Myroides odoratimimus CCUG 3837]
gi|371639246|gb|EHO04864.1| GTPase Der [Myroides odoratimimus CIP 101113]
gi|404602717|gb|EKB02404.1| GTPase Der [Myroides odoratimimus CCUG 3837]
Length = 436
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/303 (44%), Positives = 178/303 (58%), Gaps = 40/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W EF ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRRDAIVDSVSGVTRDRNYGKSEWNGREFSVIDTGGYI--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K ++ E I RQ + AIEE V+IF+VD + G
Sbjct: 62 KGSDDVFE--------------------------GEIRRQVSLAIEECDVVIFVVDVEEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T D E+A LRK K + +AVNK +S ++ + EF++LG + PI+ +SG+GT
Sbjct: 96 ITPMDAEVARLLRKE--TKPVFVAVNKVDSSKR-MDDTFEFYNLGLGEIYPIAGMSGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V + L + E E EE +P +VGRPN GKSS +NAL+GEDR IV+ I+G
Sbjct: 153 GDLLDAVVAALPEEEVRE---TEEEELPRFCVVGRPNAGKSSFINALIGEDRYIVTDIAG 209
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT FT G F L+DTAGIR+++ + E SV R+ RAI SDV L+
Sbjct: 210 TTRDAIDTRFT-QFGFDFNLVDTAGIRRKSKVKED---LEFYSVMRSVRAIEHSDVCILM 265
Query: 465 IEA 467
++A
Sbjct: 266 VDA 268
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 73/164 (44%), Gaps = 29/164 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR +VGRPN GKS+ N L+G +R IV D G TRD + R +F LVDT G+
Sbjct: 176 LPRFCVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDAIDTRFTQFGFDFNLVDTAGIR 235
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
SK + EDL + + ++ AIE S V I +VD
Sbjct: 236 RKSK----VKEDLEFYSVM-----------------------RSVRAIEHSDVCILMVDA 268
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G D+ I KN K +++ VNK + K M +F
Sbjct: 269 TRGFEGQDQNIFWLAEKN--RKGVVILVNKWDLVEKDTMTTKQF 310
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+AIVGRPNVGKS+ N L+ IV +SG TRD + + G++F +IDT G K
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRRDAIVDSVSGVTRDR-NYGKSEWNGREFSVIDTGGYIKG 63
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACIT 472
+ G +S+ AI DVV V++ IT
Sbjct: 64 SDDVFEGEIRRQVSL-----AIEECDVVIFVVDVEEGIT 97
>gi|373106138|ref|ZP_09520442.1| GTPase Der [Stomatobaculum longum]
gi|371653234|gb|EHO18638.1| GTPase Der [Stomatobaculum longum]
Length = 444
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 185/312 (59%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPN GKS+LFN + G +IV D PGVTRDR+Y W +F L+DTGG+
Sbjct: 4 PIVAIVGRPNTGKSSLFNAIAGEPISIVKDIPGVTRDRIYADCTWLNRDFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + L ++ + QA AIE + VIIFL D +
Sbjct: 62 ----EPESRDKLLVS-----------------------MREQAEIAIETADVIIFLTDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T AD+ +AD LR+ K ++LAVNK +S K + EF++L P+P+SA S
Sbjct: 95 TGVTDADDRVADMLRR--AKKPVVLAVNKVDSFTKFQNDIYEFYNLACGDPIPVSAASRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LL+ V + +VE +E +E P +A++G+PNVGKSSI+N L+GE+R IVS I
Sbjct: 153 GIGDLLEAVEAYFPQVEESEAEEDER---PKVALIGKPNVGKSSIINRLLGENRVIVSDI 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT +GQ++ IDTAGIR+++ I E S+ R A+ R+DVV
Sbjct: 210 AGTTRDAIDTVVVH-DGQEYVFIDTAGIRRKSKIHED---IERYSIIRTVTAVERADVVL 265
Query: 463 LVIEAMACITEQ 474
LVI+A +TEQ
Sbjct: 266 LVIDASEGVTEQ 277
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P+VA++G+PNVGKS++ NRL+G NR IV D G TRD + E++ +DT G+
Sbjct: 179 PKVALIGKPNVGKSSIINRLLGENRVIVSDIAGTTRDAIDTVVVHDGQEYVFIDTAGIRR 238
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK +I E +I T+ A+E + V++ ++D
Sbjct: 239 KSKIHEDI-ERYSIIRTV--------------------------TAVERADVVLLVIDAS 271
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSP----L 334
G+T D +IA + K I++ VNK + K + EF +L F L
Sbjct: 272 EGVTEQDAKIAGVAHEK--GKGILVVVNKWDLVEKTDKTMKEFTDKIKNTLSFMSYAEFL 329
Query: 335 PISAISGTGTGELLDLV 351
+SA +G +L +++
Sbjct: 330 FVSAETGQRMNKLFEMI 346
>gi|56476106|ref|YP_157695.1| GTP-binding protein EngA [Aromatoleum aromaticum EbN1]
gi|81821192|sp|Q5P7B7.1|DER_AZOSE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|56312149|emb|CAI06794.1| GTP-binding protein engA [Aromatoleum aromaticum EbN1]
Length = 442
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/313 (41%), Positives = 181/313 (57%), Gaps = 42/313 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P + +VGRPNVGKS LFNRL A+V D+PG+TRDR YG G+ ++++VDT G
Sbjct: 3 PTIVLVGRPNVGKSTLFNRLTKTRDALVADQPGLTRDRHYGIGRVGDRDYLVVDTAGFDP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K IM ++A RQA AI E+ ++F+VDG+
Sbjct: 63 VAKD--GIMHEMA---------------------------RQAEQAIAEADALLFMVDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+GLT DE+IA LR+ + + L VNK E + M +EF +LG PLP+SA G
Sbjct: 94 SGLTPHDEQIAARLRR--AGRPVYLVVNKSEGMER-TMVAAEFHALGLGDPLPVSASHGE 150
Query: 343 GTGELLDLVCSEL-KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G +LLDLV VE ED E R P IAIVGRPNVGKS+ +N+L+GE+R I
Sbjct: 151 GVKQLLDLVLGAFPPDVEPEED----EGRTPRIAIVGRPNVGKSTFVNSLLGEERVIAFD 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
+ GTTRDAI F +G+ + LIDTAG+R+R + + E SV + +AI +++VV
Sbjct: 207 MPGTTRDAIAIPFER-DGRHYTLIDTAGLRRRGKVFEA---VEKFSVIKTLQAIEQANVV 262
Query: 462 ALVIEAMACITEQ 474
LV++A I++Q
Sbjct: 263 VLVLDASQDISDQ 275
>gi|376261789|ref|YP_005148509.1| ribosome-associated GTPase EngA [Clostridium sp. BNL1100]
gi|373945783|gb|AEY66704.1| ribosome-associated GTPase EngA [Clostridium sp. BNL1100]
Length = 441
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 180/312 (57%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS FN L G +IV D PGVTRDR+Y W +F L+DTGG+
Sbjct: 4 PVVAVVGRPNVGKSTFFNYLAGSRISIVEDTPGVTRDRIYTEIEWRNTKFTLIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S ED+ + ++RQA AIE + VIIF+VD +
Sbjct: 64 YS-------EDIIM----------------------QQMKRQAEIAIETADVIIFMVDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP-ISAISGT 342
G+TA D+E+A LRK+ K ++L VNK + V EF++LG + IS++ G
Sbjct: 95 DGMTATDKEVATMLRKS--QKPVVLCVNKVDRVGDPPPDVYEFYNLGMGDMQIISSVHGL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + EE+ + +A+VG+PN GKSS++N+++GE+R IVS I
Sbjct: 153 GMGDLLDAVFEHFP----EDMDAEEDEDVIKVAVVGKPNAGKSSLINSILGENRVIVSNI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT +GQK+ IDTAGIRKR+ I T E S R++ AI R+DV
Sbjct: 209 PGTTRDAIDTHVE-KDGQKYTFIDTAGIRKRSKI---NETIEKYSTIRSWTAIERADVCL 264
Query: 463 LVIEAMACITEQ 474
++I+A +TEQ
Sbjct: 265 IMIDAEDGVTEQ 276
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA+VG+PN GKS+L N ++G NR IV + PG TRD + ++ +DT G+
Sbjct: 179 KVAVVGKPNAGKSSLINSILGENRVIVSNIPGTTRDAIDTHVEKDGQKYTFIDTAGIRKR 238
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK I E + +TI ++ AIE + V + ++D +
Sbjct: 239 SK----INETIEKYSTI-----------------------RSWTAIERADVCLIMIDAED 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGF---SP-LP 335
G+T D +IA + + K I+ +NK + K + E+ LGF +P L
Sbjct: 272 GVTEQDTKIAGYAHQQ--GKASIIVINKWDLIEKQTGTLEEYRKVVHEKLGFMTYAPVLF 329
Query: 336 ISAISGTGTGELLDLV 351
ISA +G ++ +L+
Sbjct: 330 ISAKTGQRVNKIYELI 345
>gi|452992491|emb|CCQ96022.1| GTPase essential for ribosome 50S subunit assembly [Clostridium
ultunense Esp]
Length = 440
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 184/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P V IVGRPNVGKS LFNR+VG AI D PGVTRDR+Y + W F L+DTGG+
Sbjct: 6 PVVCIVGRPNVGKSTLFNRIVGRRIAITEDNPGVTRDRIYAEAEWLNKYFNLIDTGGL-- 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P E IP+ R+ QA AI+ + VI+F+VDG
Sbjct: 64 ----EPE-----------SEEIIPINIRQ------------QAEIAIDTADVILFVVDGL 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
G+T+ DE+IA+ LRK+ K ++L NK +S K ++ EF+ LG SP+ ISA G
Sbjct: 97 DGVTSTDEDIANILRKS--GKEVLLVCNKIDS-HKTPDEIFEFYELGMGSPIIISAEQGL 153
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + + T E ++ + +A++G+PNVGKSS++N ++GE+R IV+ I
Sbjct: 154 GIGDLLDEVIKHFPEHKDT----EYDDELVRVAVIGKPNVGKSSLINNILGEERVIVTDI 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT FT E K+ IDTAG+R++ +I + E SV R A+ RSD+
Sbjct: 210 PGTTRDAIDTYFTYGE-DKYVFIDTAGLRRKRSIYEN---VERYSVVRTLTAVDRSDICV 265
Query: 463 LVIEAMACITEQ 474
L+I+ ++EQ
Sbjct: 266 LMIDGTEGVSEQ 277
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 106/224 (47%), Gaps = 43/224 (19%)
Query: 154 TIGNVPEHL-------LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
I + PEH L RVA++G+PNVGKS+L N ++G R IV D PG TRD +
Sbjct: 162 VIKHFPEHKDTEYDDELVRVAVIGKPNVGKSSLINNILGEERVIVTDIPGTTRDAIDTYF 221
Query: 207 FWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQA 266
+GE +++ +DT G+ + + +I E++ + + +
Sbjct: 222 TYGEDKYVFIDTAGL----RRKRSIYENVERYSVV-----------------------RT 254
Query: 267 TAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
A++ S + + ++DG G++ D +IA + +N K II+AVNK + K F
Sbjct: 255 LTAVDRSDICVLMIDGTEGVSEQDTKIAGYAHEN--GKGIIIAVNKWDLMEKETNTHLNF 312
Query: 327 W-----SLGF-SPLPISAISGTGTGELLDLVCSELKKVEGTEDL 364
LGF S PI IS TG +D + LK V+ +L
Sbjct: 313 EKDIRNKLGFISYAPIVFISAK-TGRRVDKLFQLLKVVDNNNNL 355
>gi|227872320|ref|ZP_03990675.1| GTPase [Oribacterium sinus F0268]
gi|227841827|gb|EEJ52102.1| GTPase [Oribacterium sinus F0268]
Length = 440
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/309 (41%), Positives = 178/309 (57%), Gaps = 40/309 (12%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS LFN + G +IV D PGVTRDR+Y W + F +VDTGG+ +S
Sbjct: 6 VAVVGRPNVGKSTLFNTIAGKQISIVQDTPGVTRDRIYAEGNWLNYYFTMVDTGGIEPIS 65
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + +M S QA AIE + VIIF+ D ++G
Sbjct: 66 D-------------------------DVLLKQMRS----QAELAIETADVIIFVTDVKSG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+ AD E+A+ LR++ K I+L VNK +S +K + EF+ LG P P+SA + G
Sbjct: 97 VVDADYEVAEMLRRS--KKPIVLCVNKVDSIKKYGNDIYEFYQLGLGEPFPVSAANHLGL 154
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V K E L EEE+ IA++G+PNVGKSS+ N L+GE+R IVS I+G
Sbjct: 155 GDLLDEVVKHFPK----EGLEEEEDGTLKIALIGKPNVGKSSLTNKLLGENRVIVSDIAG 210
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDTE T G + IDTAG+R++ + E SV R A+ R+D+ ++
Sbjct: 211 TTRDAIDTEVT-YNGTPYIFIDTAGLRRKGKVTED---IERYSVIRTVAAVDRADICIVL 266
Query: 465 IEAMACITE 473
I+A+ IT+
Sbjct: 267 IDAVEGITD 275
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L N+L+G NR IV D G TRD + + ++ +DT G+
Sbjct: 179 KIALIGKPNVGKSSLTNKLLGENRVIVSDIAGTTRDAIDTEVTYNGTPYIFIDTAGL--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + ED+ + I + AA++ + + I L+D
Sbjct: 236 -RRKGKVTEDIERYSVI-----------------------RTVAAVDRADICIVLIDAVE 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+T D IA ++ K +I+AVNK + K + EF
Sbjct: 272 GITDGDTRIAGIAHES--GKGVIIAVNKWDLVEKNDKTMQEF 311
>gi|168182597|ref|ZP_02617261.1| ribosome-associated GTPase EngA [Clostridium botulinum Bf]
gi|237795959|ref|YP_002863511.1| GTP-binding protein EngA [Clostridium botulinum Ba4 str. 657]
gi|259645868|sp|C3L0M1.1|DER_CLOB6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|182674194|gb|EDT86155.1| ribosome-associated GTPase EngA [Clostridium botulinum Bf]
gi|229263345|gb|ACQ54378.1| ribosome-associated GTPase EngA [Clostridium botulinum Ba4 str.
657]
Length = 439
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 182/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + S + RQA AIE + VIIFLVDG+
Sbjct: 62 ----EPE-SEDIIV----------------------SQMRRQAQIAIEMANVIIFLVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD+E+A LRK+ K ++L VNK + K EF++LG P+ IS+
Sbjct: 95 EGLAPADKEVAQMLRKS--KKPVVLVVNKIDK-LKDENNAYEFYNLGIGDPVTISSSQAL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD V K E + E N IA +G+PNVGKSS++N L+GE+R IVS I
Sbjct: 152 GLGDMLDRVVEHFKDDESDGEDDERIN----IAFIGKPNVGKSSLINKLLGEERLIVSDI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD+ID+ + + +F LIDTAG+R+++ + E SV R + +I R+DV
Sbjct: 208 PGTTRDSIDS-YVNTDFGEFTLIDTAGLRRKSKVKEE---IERYSVIRTYASIERADVCI 263
Query: 463 LVIEAMACITEQ 474
L+I+A I+EQ
Sbjct: 264 LMIDATEGISEQ 275
>gi|302345898|ref|YP_003814251.1| ribosome-associated GTPase EngA [Prevotella melaninogenica ATCC
25845]
gi|302149910|gb|ADK96172.1| ribosome-associated GTPase EngA [Prevotella melaninogenica ATCC
25845]
Length = 437
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/310 (42%), Positives = 181/310 (58%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRHAIVSDTAGTTRDRQYGKCQWNGREFSIVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I +Q A EE+ +++F+VD + G
Sbjct: 63 KSD-DIFED--------------------------AIRKQVLVATEEADLVLFVVDTETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + ++L NK ++ + Q +EF+ LG P+ ISA +G GT
Sbjct: 96 ITDWDEDVALILRRTKLP--VLLVANKVDNSGE-YYQAAEFYKLGLGEPICISAATGGGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD++ LK V E+ V+++ IP A+VGRPN GKSSI+NA +GEDR IV+ I+G
Sbjct: 153 GDLLDILLENLKDVP--EEAVDQD--IPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+I T +T G F L+DTAGIR++ ++ E SV R+ R+I SDV L+
Sbjct: 209 TTRDSIYTRYT-KFGFDFYLVDTAGIRRKNKVSED---LEFYSVMRSIRSIENSDVCILM 264
Query: 465 IEAMACITEQ 474
++A I Q
Sbjct: 265 LDATRGIEAQ 274
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 33/162 (20%)
Query: 155 IGNVPEHL----LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE 210
+ +VPE +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R
Sbjct: 163 LKDVPEEAVDQDIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYTKFG 222
Query: 211 HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAI 270
+F LVDT G+ + + + EDL + + ++ +I
Sbjct: 223 FDFYLVDTAGI----RRKNKVSEDLEFYSVM-----------------------RSIRSI 255
Query: 271 EESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
E S V I ++D G+ A D I +++N +K +++ VNK
Sbjct: 256 ENSDVCILMLDATRGIEAQDMNIFQLIQRN--NKSLVVVVNK 295
>gi|237747713|ref|ZP_04578193.1| GTP-binding protein engA [Oxalobacter formigenes OXCC13]
gi|229379075|gb|EEO29166.1| GTP-binding protein engA [Oxalobacter formigenes OXCC13]
Length = 446
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/315 (40%), Positives = 183/315 (58%), Gaps = 41/315 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG G+ F+++DTGG
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRAALVADYPGLTRDRHYGEGRMGDRPFLVIDTGGFEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V K +M+++A +Q A+ E+ V+IF+VDG+
Sbjct: 63 VVKE--GVMQEMA---------------------------KQTKQAVAEADVVIFIVDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS--PLPISAISG 341
G+T D+ I D+LRK+ + +ILAVNK E K V++F+ LG PL IS+ G
Sbjct: 94 QGITPHDKAITDYLRKS--GRPVILAVNKAEG-MKYTAVVADFYELGLGSDPLVISSAHG 150
Query: 342 TGTGELLD--LVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G LLD L L E TED +E + +AIVGRPNVGKS+++NAL+GE+R I
Sbjct: 151 DGVHTLLDEALKMVPLSPAE-TEDEIESGQKHIKLAIVGRPNVGKSTMINALLGEERVIA 209
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
+ GTTRDAI+ F +G+++ L+DTAG+RKR + + E SV + +AI ++
Sbjct: 210 FDLPGTTRDAIEIPFE-RDGKQYTLVDTAGLRKRGKVFQA---IEKFSVVKTLQAISEAN 265
Query: 460 VVALVIEAMACITEQ 474
VV L+++A I+EQ
Sbjct: 266 VVLLLMDAQQDISEQ 280
>gi|269792400|ref|YP_003317304.1| small GTP-binding protein [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100035|gb|ACZ19022.1| small GTP-binding protein [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 443
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 131/310 (42%), Positives = 187/310 (60%), Gaps = 40/310 (12%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS+LFNRL+G AIV D PGVTRDR+Y + W F LVDTGG+ + S
Sbjct: 4 VAIVGRPNVGKSSLFNRLIGRKLAIVEDIPGVTRDRLYAETEWDGKRFYLVDTGGIESAS 63
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
P+ +D+ I RQ A++E V+IFL+DG+ G
Sbjct: 64 ---PHPFQDV--------------------------IARQVQMALKECDVVIFLLDGKEG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
+TA DE IA+ LR++ K +I+A+NK ++P++ V + +SLGF + + IS G G
Sbjct: 95 VTAGDEAIAEMLRRS--SKPVIVAMNKIDNPKRE-DNVLDAYSLGFHTVMGISVEHGIGI 151
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V S L EG D ++ + +++VGRPNVGKSS+ N L+G++R +VSPI G
Sbjct: 152 GDLLDSVVSALPD-EGEPD--GTDDGVIKLSVVGRPNVGKSSLFNRLIGQERAVVSPIPG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD +D + + RL+DTAG+R+++ + E SV R +AI RSDV ++
Sbjct: 209 TTRDTVDVDVRLGD-VDVRLMDTAGMRRKSRVDDP---LEYYSVVRTLKAIDRSDVSLVL 264
Query: 465 IEAMACITEQ 474
++A +TEQ
Sbjct: 265 MDATELLTEQ 274
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 38/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++++VGRPNVGKS+LFNRL+G RA+V PG TRD + G+ + L+DT G+
Sbjct: 177 KLSVVGRPNVGKSSLFNRLIGQERAVVSPIPGTTRDTVDVDVRLGDVDVRLMDTAGMRRK 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
S+ + +E ++ T+ AI+ S V + L+D
Sbjct: 237 SRVD-DPLEYYSVVRTL--------------------------KAIDRSDVSLVLMDATE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE--SPRKGIMQV------SEFWSLGFSPLP- 335
LT D+ + L K +I+ VNK + PR+ + V + +L ++PL
Sbjct: 270 LLTEQDKRL--MLHVEERGKGLIIGVNKWDLLPPREDLGDVIRDQIRDQMPTLSYAPLIF 327
Query: 336 ISAISGTGTGELLDLVC 352
+SA +G G L LV
Sbjct: 328 LSAKTGRGVHRLPPLVS 344
>gi|345882257|ref|ZP_08833762.1| GTP-binding protein engA [Prevotella oulorum F0390]
gi|343918013|gb|EGV28785.1| GTP-binding protein engA [Prevotella oulorum F0390]
Length = 437
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/311 (43%), Positives = 176/311 (56%), Gaps = 43/311 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL RAIV D G TRDR YG+ W EF +VDTGG V+N
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQSRRAIVSDTAGTTRDRQYGKCSWNGKEFSVVDTGGWVVN- 63
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
++ ED I RQ A EE+ +++FLVD
Sbjct: 64 ---SDDVFED--------------------------AIRRQVLVATEEADLVLFLVDVTT 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
G+T DE++A LR+ + +IL NK ++ Q +EF+ LG P +SA +G G
Sbjct: 95 GVTDWDEDVATILRRTKLP--VILVANKVDNS-ADYYQAAEFYRLGLGDPQCVSAATGGG 151
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
TG+LLDL+ +L + E E + E+ IP A+VGRPN GKSSI+NA +GEDR IV+ I+
Sbjct: 152 TGDLLDLIIGKLPQ-ENPETI---EDDIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIA 207
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRD+I T F G F L+DTAGIR++ + E SV R+ RAI SDV L
Sbjct: 208 GTTRDSIYTRF-DKFGFDFYLVDTAGIRRKNKV---NEDLEFYSVMRSIRAIENSDVCIL 263
Query: 464 VIEAMACITEQ 474
+++A + Q
Sbjct: 264 MLDATRGVEAQ 274
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 36/165 (21%)
Query: 155 IGNVP-------EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSF 207
IG +P E +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R
Sbjct: 160 IGKLPQENPETIEDDIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRFD 219
Query: 208 WGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQAT 267
+F LVDT G+ + + + EDL + + ++
Sbjct: 220 KFGFDFYLVDTAGI----RRKNKVNEDLEFYSVM-----------------------RSI 252
Query: 268 AAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
AIE S V I ++D G+ A D I ++KN +K +++ VNK
Sbjct: 253 RAIENSDVCILMLDATRGVEAQDMNIFQLIQKN--NKSLVVVVNK 295
>gi|221194359|ref|ZP_03567416.1| ribosome-associated GTPase EngA [Atopobium rimae ATCC 49626]
gi|221185263|gb|EEE17653.1| ribosome-associated GTPase EngA [Atopobium rimae ATCC 49626]
Length = 440
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 138/315 (43%), Positives = 185/315 (58%), Gaps = 45/315 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS L NRL AIV + GVTRDR Y + W EF L+DTGG+ +
Sbjct: 4 PIVAVVGRPNVGKSTLVNRLAQRREAIVHESRGVTRDRSYHDADWNGREFCLIDTGGIES 63
Query: 224 V-SKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
V SK Q P+I E QA A EE+ VI+F+V
Sbjct: 64 VKSKDQFAPHIRE-------------------------------QALLACEEADVIVFVV 92
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DG+ G+T DEE+A +R++ DK + L VNK +SP + +F++LG PLPISA
Sbjct: 93 DGKTGITDEDEEVARIVRRS--DKPVFLVVNKKDSPETEQDGLWDFYALGVGEPLPISAS 150
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG+LLD + +EL E E+ V++ I +AI+GRPNVGKSS+ N L G+ R+IV
Sbjct: 151 HGIGTGDLLDGIVAELP--EEREEPVDDS--IIRLAIIGRPNVGKSSLANRLAGKKRSIV 206
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S ++GTTRDAIDT + Q L+DTAG+R+++ + E S+ R RA+ R+D
Sbjct: 207 SNVAGTTRDAIDTMIMWKD-QPICLVDTAGMRQKSKVHED---VEYYSLLRGLRAMDRAD 262
Query: 460 VVALVIEAMACITEQ 474
V LVI+A +TEQ
Sbjct: 263 VCLLVIDATVGVTEQ 277
>gi|295098886|emb|CBK87975.1| ribosome-associated GTPase EngA [Eubacterium cylindroides T2-87]
Length = 329
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/315 (43%), Positives = 176/315 (55%), Gaps = 53/315 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNRL+G ++IV D PGVTRDR+YG W F ++DTGG+
Sbjct: 6 VAIVGRPNVGKSTIFNRLIGERKSIVDDTPGVTRDRIYGTVEWLTQSFHIIDTGGIQ--- 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ED + I M Q AIEE+ VIIF+ + G
Sbjct: 63 ------IEDQPFSEEINM---------------------QVDIAIEEADVIIFITSAKEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+ D IA L+K+ +K ++LAVNK ++ M V EF+SLG P+ IS G G
Sbjct: 96 VMTDDMAIARKLQKS--NKPVVLAVNKADNQELQ-MAVYEFYSLGLGDPMTISGAHGIGL 152
Query: 345 GELLDLVC-----SELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G+LLD V ELK EG I + ++GRPNVGKSS++NA++ EDR IV
Sbjct: 153 GDLLDKVIELMPKKELKPYEG----------ITSFCVIGRPNVGKSSLVNAILKEDRVIV 202
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S I GTTRDAIDT F + +++ +IDTAGIRKR I + E S+ RA AI RS+
Sbjct: 203 SNIEGTTRDAIDTPFK-VDDKEYMIIDTAGIRKRGKIYEN---IEKYSILRAMNAIERSN 258
Query: 460 VVALVIEAMACITEQ 474
VV VI+ I EQ
Sbjct: 259 VVLFVIDGELGIREQ 273
>gi|169334783|ref|ZP_02861976.1| hypothetical protein ANASTE_01189 [Anaerofustis stercorihominis DSM
17244]
gi|169257521|gb|EDS71487.1| ribosome biogenesis GTPase Der [Anaerofustis stercorihominis DSM
17244]
Length = 439
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 184/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA++GRPN GKS LFN++ G +IV D PGVTRDR+ + W + F L+DTGG+
Sbjct: 4 PFVALIGRPNTGKSTLFNKISGKRISIVEDTPGVTRDRIITDTSWSGNSFFLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
KS I++ + +RQA AI+ + VI+ +VDG+
Sbjct: 62 EPKSDDVILKQM---------------------------KRQANLAIDMADVIVLVVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+TA+D E+A +RK+ K +LAVNK +S ++ EF+ L P+ ISA
Sbjct: 95 AGVTASDREVATMIRKS--GKPCVLAVNKIDSFDIDYLRY-EFYDLALGEPIGISAEHAL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V +K + VEEE R IA+VG+PN GKSS++N L+GE+R IVS I
Sbjct: 152 GFGDLLDEV---VKHFPENKKGVEEEER-TKIAVVGKPNAGKSSLVNTLLGENRVIVSNI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
SGTTRDAIDT F EG+ + LIDTAGIR++A I E S RA AI R+D+
Sbjct: 208 SGTTRDAIDTIF-NYEGKNYTLIDTAGIRRKAKIYDD---IEHYSTIRAIGAIERADICL 263
Query: 463 LVIEAMACITEQ 474
L+I+AM +T+Q
Sbjct: 264 LMIDAMEGVTDQ 275
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 113/259 (43%), Gaps = 59/259 (22%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
V E ++A+VG+PN GKS+L N L+G NR IV + G TRD + + + L+D
Sbjct: 171 VEEEERTKIAVVGKPNAGKSSLVNTLLGENRVIVSNISGTTRDAIDTIFNYEGKNYTLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + I +D+ +TI +A AIE + + +
Sbjct: 231 TAGI----RRKAKIYDDIEHYSTI-----------------------RAIGAIERADICL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSL 329
++D G+T D +IA ++ Y K +I+ +NK + K + S + L
Sbjct: 264 LMIDAMEGVTDQDVKIAGLIKDRY--KAVIIVINKWDLVEKETNTMKDMEKKVRSSLYFL 321
Query: 330 GFSP-LPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSIL 388
F+P L ISA T +L+ L+ E L E RI + +L
Sbjct: 322 DFAPILFISATEKKRTHKLMPLI---------EEVLTEYGKRIT------------TGLL 360
Query: 389 NALVGEDRTIVSPISGTTR 407
N ++G+ + +P S TR
Sbjct: 361 NEIMGDAVMMNNPPSKGTR 379
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAG 429
R P +A++GRPN GKS++ N + G+ +IV G TRD I T+ T G F LIDT G
Sbjct: 2 REPFVALIGRPNTGKSTLFNKISGKRISIVEDTPGVTRDRIITD-TSWSGNSFFLIDTGG 60
Query: 430 IRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACIT 472
I + S +A AI +DV+ LV++ A +T
Sbjct: 61 IEPK-----SDDVILKQMKRQANLAIDMADVIVLVVDGRAGVT 98
>gi|336172731|ref|YP_004579869.1| GTP-binding protein engA [Lacinutrix sp. 5H-3-7-4]
gi|334727303|gb|AEH01441.1| GTP-binding protein engA [Lacinutrix sp. 5H-3-7-4]
Length = 435
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/303 (44%), Positives = 181/303 (59%), Gaps = 41/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W EF L+DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRREAIVDAVSGVTRDRHYGKSDWNGKEFSLIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K +I E + I++Q AIEE+ IIF+VD +AG
Sbjct: 62 KGSDDIFE--------------------------AEIDKQVELAIEEADAIIFMVDVEAG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T DE++A LRK + K + L VNK ++ ++ V EF+SLG I++I+G+GT
Sbjct: 96 VTGMDEDVARLLRK--VTKPVFLVVNKVDNGKRAEDAV-EFYSLGLGDYFTIASINGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD + L + E EE++ +P A+VGRPN GKSS +NAL+GEDR IV+ I+G
Sbjct: 153 GDLLDALVEALPEQEEE----EEKDELPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT++ G F L+DTAGIRK++ + E SV R+ RAI SDV LV
Sbjct: 209 TTRDAIDTKYN-RFGFDFNLVDTAGIRKKSKVKED---LEFYSVMRSVRAIEHSDVCLLV 264
Query: 465 IEA 467
++A
Sbjct: 265 VDA 267
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G +R IV D G TRD + + +F LVDT G+
Sbjct: 175 LPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDAIDTKYNRFGFDFNLVDTAGIR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
SK + EDL + + ++ AIE S V + +VD
Sbjct: 235 KKSK----VKEDLEFYSVM-----------------------RSVRAIEHSDVCLLVVDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFSPLPI 336
G + I WL + K I++ VNK + K +EF F+ +PI
Sbjct: 268 NRGFDGQVQNIF-WLAER-NRKGIVILVNKWDLVEKDNKTTNEFEKYIRSQIEPFTDVPI 325
Query: 337 SAISG 341
IS
Sbjct: 326 VFISA 330
>gi|290968707|ref|ZP_06560245.1| ribosome-associated GTPase EngA [Megasphaera genomosp. type_1 str.
28L]
gi|335049710|ref|ZP_08542697.1| ribosome biogenesis GTPase Der [Megasphaera sp. UPII 199-6]
gi|290781360|gb|EFD93950.1| ribosome-associated GTPase EngA [Megasphaera genomosp. type_1 str.
28L]
gi|333762445|gb|EGL39943.1| ribosome biogenesis GTPase Der [Megasphaera sp. UPII 199-6]
Length = 443
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 184/312 (58%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V AIV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVKKRIAIVEDIPGVTRDRIYFDAEWLGREFTMIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V A R+ + + QA AI E+ VI+F+VDG+
Sbjct: 64 VD----------------------------AADRIFTDMRYQAELAIREADVILFVVDGK 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ DEE+A+ LR K ++L VNK +S + M + EF++LG P+ +SA++
Sbjct: 96 TGMQPQDEEVANILRT--CGKPVLLVVNKIDSVEQE-MNMYEFYALGMGDPIGVSAVNLM 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V ++ + E E E+ I IA+VGRPNVGKSS+ NAL+G++R IVS +
Sbjct: 153 NLGDLLDSVLQHIQHLPTPE---EREDTI-HIALVGRPNVGKSSMTNALLGQERVIVSNV 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD+IDT +T + F LIDTAG+R++A + E SV RA RA+ RSDV
Sbjct: 209 PGTTRDSIDTYWTYND-TSFVLIDTAGMRRKAKV---DIPVERYSVVRALRAVDRSDVAV 264
Query: 463 LVIEAMACITEQ 474
LV++A +TEQ
Sbjct: 265 LVLDAQDGVTEQ 276
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 29/149 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS++ N L+G R IV + PG TRD + + + F+L+DT G+ +
Sbjct: 180 IALVGRPNVGKSSMTNALLGQERVIVSNVPGTTRDSIDTYWTYNDTSFVLIDTAGMRRKA 239
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K + + +V R A A++ S V + ++D Q G
Sbjct: 240 K-------------------VDIPVERYSVVR--------ALRAVDRSDVAVLVLDAQDG 272
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCE 314
+T D++IA ++ + K I+ VNK +
Sbjct: 273 VTEQDKKIAGYIHE--AGKGCIIVVNKWD 299
>gi|333378546|ref|ZP_08470277.1| GTP-binding protein engA [Dysgonomonas mossii DSM 22836]
gi|332883522|gb|EGK03805.1| GTP-binding protein engA [Dysgonomonas mossii DSM 22836]
Length = 468
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 140/330 (42%), Positives = 188/330 (56%), Gaps = 50/330 (15%)
Query: 147 KQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
K + + T +GN+ VAIVGRPNVGKS LFNRL +AIV + G TRDR YG+
Sbjct: 24 KFRVQYTNMGNL-------VAIVGRPNVGKSTLFNRLTESRQAIVDETSGTTRDRQYGKV 76
Query: 207 FWGEHEFMLVDTGG-VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQ 265
WG +F LVDTGG V+N ED+ + I +Q
Sbjct: 77 EWGGQDFSLVDTGGWVVN--------SEDV----------------------FENEINKQ 106
Query: 266 ATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE 325
AIEE+ VI+F+VD GLT D +A+ LR++ K I+L NK ++ Q +E
Sbjct: 107 VAIAIEEADVILFMVDVMNGLTDLDSSVANMLRRS--KKPILLVSNKADNFNLH-AQSAE 163
Query: 326 FWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGK 384
F++LG P+ ISAI+G+GTG+LLD++ ++ K E L + IP IAIVGRPN GK
Sbjct: 164 FYALGLGDPINISAINGSGTGDLLDVIITKFTKKSEEEHLED----IPRIAIVGRPNAGK 219
Query: 385 SSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTE 444
SS++NAL+ E+R IV+ I+GTTRD+I T F F L+DTAGIRK+ + E
Sbjct: 220 SSLVNALMDEERNIVTNIAGTTRDSIYTRF-DKFNLDFYLVDTAGIRKKGKVTED---LE 275
Query: 445 ALSVNRAFRAIRRSDVVALVIEAMACITEQ 474
SV R+ +AI SDV L+I+A I Q
Sbjct: 276 YYSVIRSIKAIENSDVCVLMIDATQGIESQ 305
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 31/155 (20%)
Query: 160 EHL--LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
EHL +PR+AIVGRPN GKS+L N L+ R IV + G TRD +Y R +F LVD
Sbjct: 201 EHLEDIPRIAIVGRPNAGKSSLVNALMDEERNIVTNIAGTTRDSIYTRFDKFNLDFYLVD 260
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + + EDL + I ++ AIE S V +
Sbjct: 261 TAGI----RKKGKVTEDLEYYSVI-----------------------RSIKAIENSDVCV 293
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
++D G+ + D I ++KN K +++ VNK
Sbjct: 294 LMIDATQGIESQDMNIFSLIQKN--RKGLVVCVNK 326
>gi|325285620|ref|YP_004261410.1| GTP-binding protein engA [Cellulophaga lytica DSM 7489]
gi|324321074|gb|ADY28539.1| GTP-binding protein engA [Cellulophaga lytica DSM 7489]
Length = 434
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 181/303 (59%), Gaps = 43/303 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W EF L+DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRREAIVDAVSGVTRDRHYGKSDWNGVEFSLIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E + + I++Q AI+E+ I+F+VD ++G
Sbjct: 62 ---------------LGSEDV-----------FEAEIDKQVELAIDEADAIVFMVDVESG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T DE++A LR+ +DK I L VNK ++ ++ V EF+SLG I++I+G+GT
Sbjct: 96 VTGMDEDVAKLLRR--VDKPIFLVVNKVDNAKRAEDAV-EFYSLGLGDYFTIASINGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V L + E E + +P A+VGRPN GKSS +NAL+GE+R IV+ ++G
Sbjct: 153 GDLLDAVVKVLPEKE------TENDDLPRFAVVGRPNAGKSSFINALIGEERYIVTDVAG 206
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+IDT++ G +F L+DTAGIR++A + E SV R+ RAI +DV L+
Sbjct: 207 TTRDSIDTKYN-RFGFEFNLVDTAGIRRKAKVKED---LEFYSVMRSVRAIEHADVCILM 262
Query: 465 IEA 467
++A
Sbjct: 263 LDA 265
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 69/150 (46%), Gaps = 29/150 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G R IV D G TRD + + EF LVDT G+
Sbjct: 173 LPRFAVVGRPNAGKSSFINALIGEERYIVTDVAGTTRDSIDTKYNRFGFEFNLVDTAGI- 231
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ AIE + V I ++D
Sbjct: 232 ---RRKAKVKEDLEFYSVM-----------------------RSVRAIEHADVCILMLDA 265
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNK 312
G E I WL + +K I++ VNK
Sbjct: 266 TRGFDGQVENIF-WLAQR-NNKGIVILVNK 293
>gi|126663301|ref|ZP_01734299.1| GTP-binding protein EngA [Flavobacteria bacterium BAL38]
gi|126624959|gb|EAZ95649.1| GTP-binding protein EngA [Flavobacteria bacterium BAL38]
Length = 436
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/303 (43%), Positives = 177/303 (58%), Gaps = 40/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W EF ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRREAIVDSVSGVTRDRNYGKSEWNGKEFSVIDTGGYI--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K +I E + I +Q AI+E+ IIF+VD + G
Sbjct: 62 KGSDDIFE--------------------------AEIRKQVELAIDEADAIIFVVDVEEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T D+E+A LRK + K ++L +NK ++ + V EF++LG IS +SG+GT
Sbjct: 96 ITPMDDEVAKLLRK--VKKPVLLVINKVDNAMREKDAV-EFYNLGLGEYFTISGMSGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GELLD + L ++ ++ EE +P +VGRPN GKSS +NAL+GEDR +V+ I+G
Sbjct: 153 GELLDKLVEVLPEM---PEVTEEVEPLPRFCVVGRPNAGKSSFINALIGEDRFVVTDIAG 209
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT + G +F L+DTAGIR++A + E SV R+ RAI SDV LV
Sbjct: 210 TTRDAIDTRYNR-FGFEFNLVDTAGIRRKAKVKED---LEFYSVMRSVRAIEHSDVCLLV 265
Query: 465 IEA 467
I+A
Sbjct: 266 IDA 268
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 84/193 (43%), Gaps = 37/193 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR +VGRPN GKS+ N L+G +R +V D G TRD + R EF LVDT G+
Sbjct: 176 LPRFCVVGRPNAGKSSFINALIGEDRFVVTDIAGTTRDAIDTRYNRFGFEFNLVDTAGI- 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ AIE S V + ++D
Sbjct: 235 ---RRKAKVKEDLEFYSVM-----------------------RSVRAIEHSDVCLLVIDA 268
Query: 283 QAGLTAADEEIADWL-RKNYMDKFIILAVNKCESPRKGIMQVSEFWS------LGFSPLP 335
G D+ I WL KN K +++ VNK + K M ++ F+ +P
Sbjct: 269 TRGFEGQDQSIF-WLAEKN--RKGVVILVNKWDLVEKDTMTTRDYERKIREELQPFTDVP 325
Query: 336 ISAISGTGTGELL 348
I IS LL
Sbjct: 326 ILFISALTKQRLL 338
>gi|335428823|ref|ZP_08555733.1| GTP-binding protein Der [Haloplasma contractile SSD-17B]
gi|335430793|ref|ZP_08557679.1| GTP-binding protein Der [Haloplasma contractile SSD-17B]
gi|334887333|gb|EGM25665.1| GTP-binding protein Der [Haloplasma contractile SSD-17B]
gi|334891764|gb|EGM30010.1| GTP-binding protein Der [Haloplasma contractile SSD-17B]
Length = 435
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/313 (42%), Positives = 181/313 (57%), Gaps = 42/313 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPN GKS +FNR+VG +IV D PGVTRDR+Y + W EF L+DTGG+
Sbjct: 1 MLPVVAIVGRPNCGKSTIFNRIVGERVSIVEDTPGVTRDRIYSNAEWLGKEFRLIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
E A I+ QA AIEE+ VI+F+ +
Sbjct: 61 ------------------------------EIGDAPFLQQIKEQAEIAIEEADVIVFVTN 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAIS 340
+ G+T DE +A L K+ +K IILAVNK + + EF+SLG P+ IS+
Sbjct: 91 VRDGVTIEDETVAKMLYKS--NKEIILAVNKVDDISFK-NDIYEFYSLGIGEPIAISSTH 147
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G G+LLD V + + D+V +E+ + ++GRPNVGKSS+ NA++GE+R IVS
Sbjct: 148 GIGFGDLLDEVVNRFPE---KPDIVYDED-VVKFCLIGRPNVGKSSLTNAILGEERVIVS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I+GTTRDAIDT+F + + F +IDTAG+RK+ + TE SV RA +AI R+D+
Sbjct: 204 DIAGTTRDAIDTKFKKDDDE-FVVIDTAGMRKKGKVYEK---TEKYSVLRALKAIDRADI 259
Query: 461 VALVIEAMACITE 473
+V+ A I E
Sbjct: 260 AIIVLNAEEGIIE 272
>gi|408673179|ref|YP_006872927.1| GTP-binding protein engA [Emticicia oligotrophica DSM 17448]
gi|387854803|gb|AFK02900.1| GTP-binding protein engA [Emticicia oligotrophica DSM 17448]
Length = 436
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 133/311 (42%), Positives = 178/311 (57%), Gaps = 42/311 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL+ AI + PGVTRDR YG + W E F ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTLFNRLIESRVAITDNMPGVTRDRHYGHAVWTEKYFTVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E T E A I Q AI+ES V++F+VD G
Sbjct: 62 ---------------VGSED----TFEGA-------IREQVEIAIDESSVVLFVVDTMTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP--LPISAISGTG 343
LT D+E A+ LR++ K + +A NK E+ + +EF+ LG PIS G+G
Sbjct: 96 LTDLDKEFANILRRS--KKPVFVAANKAETFERH-QTAAEFYELGLGDEVFPISGADGSG 152
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
TGELLD + ++ G E+ E IP IAI+GRPNVGKSS LNAL G+DR+IV+ I+
Sbjct: 153 TGELLDAIVAKFPD-SGEENPNEG---IPRIAILGRPNVGKSSFLNALTGKDRSIVTNIA 208
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRDAIDT + G+ F L DTAGIRK+A + + E S R+ +A+ SD+ +
Sbjct: 209 GTTRDAIDTHYR-LYGKDFILTDTAGIRKKAKVHDN---IEFYSTLRSIKALENSDICVV 264
Query: 464 VIEAMACITEQ 474
+++A + Q
Sbjct: 265 LLDASQGLESQ 275
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 41/160 (25%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RMYGRSFWGEHE 212
P +PR+AI+GRPNVGKS+ N L G +R+IV + G TRD R+YG+ +
Sbjct: 172 PNEGIPRIAILGRPNVGKSSFLNALTGKDRSIVTNIAGTTRDAIDTHYRLYGK------D 225
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F+L DT G+ +K NI +T+ ++ A+E
Sbjct: 226 FILTDTAGIRKKAKVHDNI----EFYSTL-----------------------RSIKALEN 258
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
S + + L+D GL + D I + K I+L +NK
Sbjct: 259 SDICVVLLDASQGLESQDVSII--AHAHNAKKGIVLMINK 296
>gi|228473598|ref|ZP_04058350.1| ribosome-associated GTPase EngA [Capnocytophaga gingivalis ATCC
33624]
gi|228274970|gb|EEK13780.1| ribosome-associated GTPase EngA [Capnocytophaga gingivalis ATCC
33624]
Length = 434
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 178/303 (58%), Gaps = 42/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRLV AIV GVTRDR YG++ W +F ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLVQRREAIVDSISGVTRDRHYGKTDWNGRDFSVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
G + +E I++Q AIEE+ IIFL D ++G
Sbjct: 62 -----------------AGGDDIFQKE---------IDKQVNLAIEEADAIIFLTDVESG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+ DEEIA LR++ F LAVNK ++ ++ I +EF++LGF + PIS+++G+GT
Sbjct: 96 IMGIDEEIAQLLRRSKKPTF--LAVNKVDNTKRAI-DANEFYALGFEEIFPISSVNGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GELLD V L + E E+ A+VGRPN GKSS +NAL+GEDR IV+ I+G
Sbjct: 153 GELLDAVVKVLPEEEKVEEEPLPR-----FAVVGRPNAGKSSFINALIGEDRYIVTDIAG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT + G +F L+DTAGIR++A + E SV R+ RAI SDV L+
Sbjct: 208 TTRDAIDTRYN-RFGFEFNLVDTAGIRRKAKVKED---LEFYSVMRSVRAIEHSDVCLLL 263
Query: 465 IEA 467
++A
Sbjct: 264 VDA 266
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 70/162 (43%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R A+VGRPN GKS+ N L+G +R IV D G TRD + R EF LVDT G+
Sbjct: 176 RFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDAIDTRYNRFGFEFNLVDTAGI--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + EDL + + ++ AIE S V + LVD
Sbjct: 233 -RRKAKVKEDLEFYSVM-----------------------RSVRAIEHSDVCLLLVDATR 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G D I WL + K +++ VNK + K F
Sbjct: 269 GFEGQDANIF-WLAQR-NKKGVVILVNKWDLVEKDTHTTKHF 308
>gi|392397706|ref|YP_006434307.1| ribosome-associated GTPase EngA [Flexibacter litoralis DSM 6794]
gi|390528784|gb|AFM04514.1| ribosome-associated GTPase EngA [Flexibacter litoralis DSM 6794]
Length = 435
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 178/310 (57%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRLV +AI+ DE GVTRDR YG+S W + F ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTLFNRLVEERKAIMHDESGVTRDRHYGQSEWNGNFFTVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E + I Q A+EE+ VI+F+VD G
Sbjct: 62 ---------------VGSEDV-----------FEKAIREQVEIAMEEASVILFMVDTHVG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP-ISAISGTGT 344
+ DEE LR++ K I L NK E+ +EF++LG L +S+ +GTGT
Sbjct: 96 VNPLDEEFVKVLRRS--RKPIYLVANKVENFEHR-TNATEFYNLGIGELYCVSSQTGTGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V +++ G ED +P IAI+GRPNVGKSS LN L+GE+RTIVS ISG
Sbjct: 153 GDLLDDVVKNFEEI-GDED---PNAGLPKIAILGRPNVGKSSFLNILLGEERTIVSDISG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+IDT + GQ+F L DTAG+R++A + + E SV R+ +A+ DV ++
Sbjct: 209 TTRDSIDTHYKA-YGQEFILTDTAGMRRKARVKEN---IEFYSVMRSLKALDDCDVCIVM 264
Query: 465 IEAMACITEQ 474
I+A + Q
Sbjct: 265 IDATQKLESQ 274
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P LP++AI+GRPNVGKS+ N L+G R IV D G TRD + EF+L DT
Sbjct: 171 PNAGLPKIAILGRPNVGKSSFLNILLGEERTIVSDISGTTRDSIDTHYKAYGQEFILTDT 230
Query: 219 GGVLNVSKSQPNI 231
G+ ++ + NI
Sbjct: 231 AGMRRKARVKENI 243
>gi|441501604|ref|ZP_20983694.1| GTP-binding protein EngA [Fulvivirga imtechensis AK7]
gi|441434627|gb|ELR68081.1| GTP-binding protein EngA [Fulvivirga imtechensis AK7]
Length = 434
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 132/303 (43%), Positives = 177/303 (58%), Gaps = 42/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL+ +AI+ DE GVTRDR YG + W F ++DTGG + S
Sbjct: 5 VAIVGRPNVGKSTLFNRLIEKRKAIMDDESGVTRDRHYGYAEWTGKHFTVIDTGGYVTGS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
ED + + I Q AI+E+ VI+F+VD G
Sbjct: 65 -------ED----------------------KFETEIRHQVELAIDEASVILFMVDSHMG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
LT D++ A LR + K I L NK ++ M SEF++LG + P+S+ SG+GT
Sbjct: 96 LTDLDKDFARVLRTS--KKPIYLVANKADTTEYMHM-ASEFYALGMGEIYPVSSASGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V EG ED E+ IP IAI+GRPNVGKSS LNAL+G++R+IV+ +G
Sbjct: 153 GDLLDRVVEHFD--EGQED---PESGIPRIAILGRPNVGKSSFLNALLGKERSIVTDEAG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAI+T + G+ F L DTAGIRK++ + E SV R+ +A++ SDV +
Sbjct: 208 TTRDAINTHYK-LYGKDFILTDTAGIRKKSKVKED---IEFYSVLRSIQALQDSDVCIFI 263
Query: 465 IEA 467
I+A
Sbjct: 264 IDA 266
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 53/197 (26%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RMYGRSFWGEHE 212
PE +PR+AI+GRPNVGKS+ N L+G R+IV DE G TRD ++YG+ +
Sbjct: 170 PESGIPRIAILGRPNVGKSSFLNALLGKERSIVTDEAGTTRDAINTHYKLYGK------D 223
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F+L DT G+ SK + ED+ + + ++ A+++
Sbjct: 224 FILTDTAGIRKKSK----VKEDIEFYSVL-----------------------RSIQALQD 256
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK----------CESPRKGIMQ 322
S V IF++D + GL A D I + K K I++ VNK E RK I+Q
Sbjct: 257 SDVCIFIIDAERGLEAQDMSIINLALK--YRKGIMIMVNKWDLIEKENNTAEQYRKAIVQ 314
Query: 323 VSEFWSLGFSPLPISAI 339
+ L + P+ +++
Sbjct: 315 --KLGQLDYIPIIFTSV 329
>gi|295398578|ref|ZP_06808610.1| ribosome-associated GTPase EngA [Aerococcus viridans ATCC 11563]
gi|294973179|gb|EFG48974.1| ribosome-associated GTPase EngA [Aerococcus viridans ATCC 11563]
Length = 436
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/310 (40%), Positives = 183/310 (59%), Gaps = 42/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS +FNR+VG +IV DEPGVTRDR+Y + W + ++DTGG+
Sbjct: 6 IAIVGRPNVGKSTIFNRVVGDRISIVQDEPGVTRDRIYAQGEWLGKQLNVIDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
E + I QA A+EE+ VII + + + G
Sbjct: 62 --------------------------EFNDQDFMTQIRLQAEIAMEEADVIIMMTNVREG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D +IA LRK DK ++LAVNK ++P + ++ +F+SLG P PIS G G
Sbjct: 96 VTKTDSQIASMLRKT--DKPVVLAVNKVDNPEQR-AEIYDFYSLGLGDPYPISGSHGLGI 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G++L+ E+ + + ++++ + A++GRPNVGKSS++NA++GE+R IVS ++G
Sbjct: 153 GDILE----EVFHLAPDDIENDDDDDTISFALIGRPNVGKSSLVNAILGENRVIVSNVAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT F +GQ +++IDTAGIRKR + + TE SV RA RAI R+ V +V
Sbjct: 209 TTRDAIDTSFE-DDGQVYKIIDTAGIRKRGKVYEA---TEKYSVMRAMRAIERAQVCLVV 264
Query: 465 IEAMACITEQ 474
+ A I +Q
Sbjct: 265 LNAEEGIRDQ 274
>gi|421186315|ref|ZP_15643708.1| GTPase [Oenococcus oeni AWRIB418]
gi|399967268|gb|EJO01750.1| GTPase [Oenococcus oeni AWRIB418]
Length = 442
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 130/313 (41%), Positives = 183/313 (58%), Gaps = 43/313 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS LFNR+VG +AIV D GVTRDR+Y ++ W EF ++DTGG +S
Sbjct: 7 IAIVGRPNVGKSTLFNRIVGTRKAIVNDISGVTRDRLYEKAEWNGSEFSVIDTGG---IS 63
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
S +++ I+ QA AI+E+ IIF+VDG G
Sbjct: 64 ASNDVFIKE---------------------------IKEQAELAIKEADAIIFVVDGHNG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D+ +A L ++ + I LAVN ++ + + + +F+SLG P PISA+ G G
Sbjct: 97 ITKDDQLVAKVLYRS--KQPIYLAVNHLDNIEQHDL-IYDFYSLGLGDPYPISAVHGNGV 153
Query: 345 GELLDLVCSELKKVEGTEDLV---EEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+LLD + K GT V ++E++I IAI+GRPNVGKSSI N+L+ +R+IVS
Sbjct: 154 ADLLDDIVDAFKN--GTNGGVSDQDQEDQIK-IAIIGRPNVGKSSIFNSLIKRNRSIVSD 210
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRD +D++F +G F + DTAGIRK + S TE +V RA AI +DV+
Sbjct: 211 IQGTTRDTVDSQFEDNQGNVFTISDTAGIRKSGKVIES---TEKYAVLRAQMAIESADVI 267
Query: 462 ALVIEAMACITEQ 474
+VI+A I +Q
Sbjct: 268 LVVIDASTGIQDQ 280
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 34/165 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
++AI+GRPNVGKS++FN L+ NR+IV D G TRD + S + +++ F + DT G+
Sbjct: 182 KIAIIGRPNVGKSSIFNSLIKRNRSIVSDIQGTTRDTV--DSQFEDNQGNVFTISDTAGI 239
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
K ++E +T + AV R A AIE + VI+ ++D
Sbjct: 240 RKSGK----VIE---------------STEKYAVLR--------AQMAIESADVILVVID 272
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + +++ VNK ++ K + +F
Sbjct: 273 ASTGIQDQDKHIAGLATEE--GRAVVIVVNKWDAIEKDNYSMKQF 315
>gi|421188916|ref|ZP_15646248.1| GTPase [Oenococcus oeni AWRIB419]
gi|399964249|gb|EJN98903.1| GTPase [Oenococcus oeni AWRIB419]
Length = 442
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 130/313 (41%), Positives = 183/313 (58%), Gaps = 43/313 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS LFNR+VG +AIV D GVTRDR+Y ++ W EF ++DTGG +S
Sbjct: 7 IAIVGRPNVGKSTLFNRIVGTRKAIVNDISGVTRDRLYEKAEWNGSEFSVIDTGG---IS 63
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
S +++ I+ QA AI+E+ IIF+VDG G
Sbjct: 64 TSNDVFIKE---------------------------IKEQAELAIKEADAIIFVVDGHNG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D+ +A L ++ + I LAVN ++ + + + +F+SLG P PISA+ G G
Sbjct: 97 ITKDDQLVAKVLYRS--KQPIYLAVNHLDNIEQHDL-IYDFYSLGLGDPYPISAVHGNGV 153
Query: 345 GELLDLVCSELKKVEGTEDLV---EEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+LLD + K GT V ++E++I IAI+GRPNVGKSSI N+L+ +R+IVS
Sbjct: 154 ADLLDDIVDAFK--NGTNGGVSDQDQEDQIK-IAIIGRPNVGKSSIFNSLIKRNRSIVSD 210
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRD +D++F +G F + DTAGIRK + S TE +V RA AI +DV+
Sbjct: 211 IQGTTRDTVDSQFEDNQGNVFTISDTAGIRKSGKVIES---TEKYAVLRAQMAIESADVI 267
Query: 462 ALVIEAMACITEQ 474
+VI+A I +Q
Sbjct: 268 LVVIDASTGIQDQ 280
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 34/165 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
++AI+GRPNVGKS++FN L+ NR+IV D G TRD + S + +++ F + DT G+
Sbjct: 182 KIAIIGRPNVGKSSIFNSLIKRNRSIVSDIQGTTRDTV--DSQFEDNQGNVFTISDTAGI 239
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
K ++E +T + AV R A AIE + VI+ ++D
Sbjct: 240 RKSGK----VIE---------------STEKYAVLR--------AQMAIESADVILVVID 272
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + +++ VNK ++ K + +F
Sbjct: 273 ASTGIQDQDKHIAGLATEE--GRAVVIVVNKWDAIEKDNYSMKQF 315
>gi|319936463|ref|ZP_08010879.1| GTP-binding protein engA [Coprobacillus sp. 29_1]
gi|319808578|gb|EFW05130.1| GTP-binding protein engA [Coprobacillus sp. 29_1]
Length = 435
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 131/310 (42%), Positives = 183/310 (59%), Gaps = 43/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGR NVGKS +FNR+VG +IV D PGVTRDR+Y + W +F L+DTGG+
Sbjct: 6 VAIVGRANVGKSTIFNRIVGERVSIVEDIPGVTRDRIYANASWLTRDFRLIDTGGIE--- 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ED + T I M QA AIEE+ VI+F+V+G+ G
Sbjct: 63 ------LEDASFTEQIKM---------------------QAEIAIEEADVILFVVNGREG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D +A L+K+ K I+LAVNK + + +F++LG P+ +S G G
Sbjct: 96 ITREDAFVARMLQKS--KKPIVLAVNKIDDQVYK-DNIYDFYNLGVGDPIAVSGSHGIGI 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G++LD + + + E + E+E R +I+GRPNVGKSS+ NAL+GE+R IVS I G
Sbjct: 153 GDILDQIIHLMPESEDHRE--EDEIR---FSIIGRPNVGKSSLTNALLGEERVIVSDIEG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT F +GQK+R+IDTAG+RK+ + + E S+ RA A+ +SDVV +V
Sbjct: 208 TTRDAIDTAFE-KDGQKYRVIDTAGMRKKGKVYEN---IEKYSILRALSAVEKSDVVLVV 263
Query: 465 IEAMACITEQ 474
I+ + EQ
Sbjct: 264 IDGERGVVEQ 273
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 48/197 (24%)
Query: 161 HLLP-----------RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG 209
HL+P R +I+GRPNVGKS+L N L+G R IV D G TRD +
Sbjct: 161 HLMPESEDHREEDEIRFSIIGRPNVGKSSLTNALLGEERVIVSDIEGTTRDAIDTAFEKD 220
Query: 210 EHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAA 269
++ ++DT G+ K NI E +I +A +A
Sbjct: 221 GQKYRVIDTAGMRKKGKVYENI-EKYSIL--------------------------RALSA 253
Query: 270 IEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSE-- 325
+E+S V++ ++DG+ G+ D+ +A + + +IL VNK + +K MQ E
Sbjct: 254 VEKSDVVLVVIDGERGVVEQDKHVAG--NAHEAGRGVILVVNKWDLVQKDGKTMQKMEKE 311
Query: 326 ----FWSLGFSPLPISA 338
F L ++P+ ++
Sbjct: 312 LREQFKYLDYAPIVFTS 328
>gi|116491039|ref|YP_810583.1| GTPase [Oenococcus oeni PSU-1]
gi|290890519|ref|ZP_06553594.1| hypothetical protein AWRIB429_0984 [Oenococcus oeni AWRIB429]
gi|419758814|ref|ZP_14285126.1| GTPase [Oenococcus oeni AWRIB304]
gi|419857722|ref|ZP_14380426.1| GTPase [Oenococcus oeni AWRIB202]
gi|419859511|ref|ZP_14382165.1| GTPase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|421185437|ref|ZP_15642848.1| GTPase [Oenococcus oeni AWRIB318]
gi|421189701|ref|ZP_15647015.1| GTPase [Oenococcus oeni AWRIB422]
gi|421190841|ref|ZP_15648125.1| GTPase [Oenococcus oeni AWRIB548]
gi|421193643|ref|ZP_15650889.1| GTPase [Oenococcus oeni AWRIB553]
gi|421195317|ref|ZP_15652526.1| GTPase [Oenococcus oeni AWRIB568]
gi|421197430|ref|ZP_15654605.1| GTPase [Oenococcus oeni AWRIB576]
gi|116091764|gb|ABJ56918.1| Predicted GTPase [Oenococcus oeni PSU-1]
gi|290479915|gb|EFD88564.1| hypothetical protein AWRIB429_0984 [Oenococcus oeni AWRIB429]
gi|399904269|gb|EJN91725.1| GTPase [Oenococcus oeni AWRIB304]
gi|399964618|gb|EJN99259.1| GTPase [Oenococcus oeni AWRIB318]
gi|399971802|gb|EJO06041.1| GTPase [Oenococcus oeni AWRIB553]
gi|399972791|gb|EJO06990.1| GTPase [Oenococcus oeni AWRIB422]
gi|399973537|gb|EJO07702.1| GTPase [Oenococcus oeni AWRIB548]
gi|399975039|gb|EJO09107.1| GTPase [Oenococcus oeni AWRIB576]
gi|399976023|gb|EJO10052.1| GTPase [Oenococcus oeni AWRIB568]
gi|410496528|gb|EKP88011.1| GTPase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|410497499|gb|EKP88972.1| GTPase [Oenococcus oeni AWRIB202]
Length = 442
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 130/313 (41%), Positives = 183/313 (58%), Gaps = 43/313 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS LFNR+VG +AIV D GVTRDR+Y ++ W EF ++DTGG +S
Sbjct: 7 IAIVGRPNVGKSTLFNRIVGTRKAIVNDISGVTRDRLYEKAEWNGSEFSVIDTGG---IS 63
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
S +++ I+ QA AI+E+ IIF+VDG G
Sbjct: 64 ASNDVFIKE---------------------------IKEQAELAIKEADAIIFVVDGHNG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D+ +A L ++ + I LAVN ++ + + + +F+SLG P PISA+ G G
Sbjct: 97 ITKDDQLVAKVLYRS--KQPIYLAVNHLDNIEQHDL-IYDFYSLGLGDPYPISAVHGNGV 153
Query: 345 GELLDLVCSELKKVEGTEDLV---EEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+LLD + K GT V ++E++I IAI+GRPNVGKSSI N+L+ +R+IVS
Sbjct: 154 ADLLDDIVDAFK--NGTNGGVSDQDQEDQIK-IAIIGRPNVGKSSIFNSLIKRNRSIVSD 210
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I GTTRD +D++F +G F + DTAGIRK + S TE +V RA AI +DV+
Sbjct: 211 IQGTTRDTVDSQFEDNQGNVFTISDTAGIRKSGKVIES---TEKYAVLRAQMAIESADVI 267
Query: 462 ALVIEAMACITEQ 474
+VI+A I +Q
Sbjct: 268 LVVIDASTGIQDQ 280
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 34/165 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
++AI+GRPNVGKS++FN L+ NR+IV D G TRD + S + +++ F + DT G+
Sbjct: 182 KIAIIGRPNVGKSSIFNSLIKRNRSIVSDIQGTTRDTV--DSQFEDNQGNVFTISDTAGI 239
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
K ++E +T + AV R A AIE + VI+ ++D
Sbjct: 240 RKSGK----VIE---------------STEKYAVLR--------AQMAIESADVILVVID 272
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + +++ VNK ++ K + +F
Sbjct: 273 ASTGIQDQDKHIAGLATEE--GRAVVIVVNKWDAIEKDNYSMKQF 315
>gi|340621593|ref|YP_004740045.1| GTP-binding protein engA [Capnocytophaga canimorsus Cc5]
gi|339901859|gb|AEK22938.1| GTP-binding protein engA [Capnocytophaga canimorsus Cc5]
Length = 434
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 176/303 (58%), Gaps = 42/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG++ W EF ++DTGG + S
Sbjct: 5 VAIVGRPNVGKSTFFNRLIKRREAIVDAVSGVTRDRHYGKTDWNGVEFSVIDTGGYVVGS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
I++Q + AI+E+ I+F+VD + G
Sbjct: 65 DDS-----------------------------FEKEIDKQVSLAIDEADAIVFMVDVEDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T DE +AD LRK+ K I +AVNK +S + + EF++ GF + +S+I+G+GT
Sbjct: 96 ITGMDETVADLLRKS--KKPIFVAVNKVDSNNR-VANSHEFYAFGFENVYTLSSINGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GELLD + L + E D +P A+VGRPN GKSS +NAL+GEDR IV+ I+G
Sbjct: 153 GELLDDLVKILPERESKND-----EDLPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT++ G +F L+DTAGIR+++ + E SV R+ RAI +DV L+
Sbjct: 208 TTRDAIDTKYNR-FGFEFNLVDTAGIRRKSKVKED---LEFYSVMRSIRAIEHADVCILM 263
Query: 465 IEA 467
I+A
Sbjct: 264 IDA 266
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G +R IV D G TRD + + EF LVDT G+
Sbjct: 174 LPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDAIDTKYNRFGFEFNLVDTAGIR 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
SK + EDL + + ++ AIE + V I ++D
Sbjct: 234 RKSK----VKEDLEFYSVM-----------------------RSIRAIEHADVCILMIDA 266
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFSPLPI 336
G D I WL + K I++ VNK + K F ++ F+ +PI
Sbjct: 267 TRGFEGQDSNIF-WLAQRNR-KGIVILVNKWDLVEKQTNTAKNFEAIIRKEIEPFTDVPI 324
Query: 337 SAISG 341
IS
Sbjct: 325 IFISA 329
>gi|330752592|emb|CBL87538.1| GTP-binding protein [uncultured Flavobacteriia bacterium]
Length = 447
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 133/324 (41%), Positives = 182/324 (56%), Gaps = 53/324 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNR+V AIV + GVTRDR YG+S W F L+DTGG L S
Sbjct: 18 VAIVGRPNVGKSTFFNRMVQKRDAIVDSQSGVTRDRHYGKSDWNGRGFTLIDTGGYLENS 77
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
ED+ I++Q + A+EE+ IIF+VD G
Sbjct: 78 -------EDV----------------------FQKEIDKQVSLAVEEADAIIFIVDVIDG 108
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP-ISAISGTGT 344
+T D+ IA LR++ K I LA+NK ++ + M SEF+SLG+ IS++SG+GT
Sbjct: 109 VTGMDQNIAKLLRRS--SKPIYLAINKVDNTSRTQM-TSEFYSLGYKNFYCISSVSGSGT 165
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRI----PAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GELLD + S++ +EE +I P A+VGRPN GKSS +NA++G++R IV+
Sbjct: 166 GELLDDLISQMP---------DEEKKIGDELPNFAVVGRPNAGKSSFINAIIGKERNIVT 216
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I+GTTRD+I++ + G F LIDTAGIRK+ I E S+ R+ R+I +DV
Sbjct: 217 KIAGTTRDSINSRYK-RFGFDFNLIDTAGIRKKTKIKED---IEFYSIMRSVRSIEYADV 272
Query: 461 VALVIEAMACITEQAD---WRDHR 481
L+++A Q W HR
Sbjct: 273 CILIVDATRGFDGQVQNIFWLTHR 296
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP A+VGRPN GKS+ N ++G R IV G TRD + R +F L+DT G+
Sbjct: 187 LPNFAVVGRPNAGKSSFINAIIGKERNIVTKIAGTTRDSINSRYKRFGFDFNLIDTAGI- 245
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + I ED+ + + ++ +IE + V I +VD
Sbjct: 246 ---RKKTKIKEDIEFYSIM-----------------------RSVRSIEYADVCILIVDA 279
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNK 312
G + I +N +K I++ VNK
Sbjct: 280 TRGFDGQVQNIFWLTHRN--NKGIVILVNK 307
>gi|120437317|ref|YP_863003.1| GTP-binding protein EngA [Gramella forsetii KT0803]
gi|166198719|sp|A0M5P1.1|DER_GRAFK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|117579467|emb|CAL67936.1| GTP-binding protein EngA [Gramella forsetii KT0803]
Length = 434
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 131/323 (40%), Positives = 192/323 (59%), Gaps = 48/323 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AI+ GVTRDR YG+S W +F L+DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRREAIIDSVSGVTRDRHYGKSDWNGKKFSLIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K +I E + I++Q AI+E+ IIF+VD ++G
Sbjct: 62 KGSDDIFE--------------------------AEIDKQVELAIDEADAIIFIVDVESG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T+ DEE+A+ LR+ ++K ++LAVNK ++ ++ + EF+SLG PI++ +G+GT
Sbjct: 96 VTSMDEEVANLLRR--VNKPVLLAVNKVDNNKR-LANAVEFYSLGLGEYFPIASTNGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD + L ++E +E+ +P A+VGRPN GKSS +NAL+GEDR IV+ I+G
Sbjct: 153 GDLLDALIEALPEIEEE-----DESELPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+IDT + G +F L+DTAGIR+++ + + E SV R+ RAI DV +V
Sbjct: 208 TTRDSIDTRYN-RFGFEFNLVDTAGIRRKSKVKEN---LEFYSVMRSVRAIENCDVCLVV 263
Query: 465 IEAMACITEQAD---W---RDHR 481
++A Q W R+H+
Sbjct: 264 LDATRGFDGQVQNIFWLAQRNHK 286
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 35/184 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G +R IV D G TRD + R EF LVDT G+
Sbjct: 174 LPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDSIDTRYNRFGFEFNLVDTAGIR 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
SK + E+L + + ++ AIE V + ++D
Sbjct: 234 RKSK----VKENLEFYSVM-----------------------RSVRAIENCDVCLVVLDA 266
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFSPLPI 336
G + I ++N+ K I++ VNK + K + E+ ++ F+ +PI
Sbjct: 267 TRGFDGQVQNIFWLAQRNH--KGIVILVNKWDLVDKETNTMKEYEAMIRREIEPFTDVPI 324
Query: 337 SAIS 340
IS
Sbjct: 325 VFIS 328
>gi|257093699|ref|YP_003167340.1| GTP-binding protein EngA [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257046223|gb|ACV35411.1| small GTP-binding protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 492
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 132/313 (42%), Positives = 182/313 (58%), Gaps = 47/313 (15%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+ +VGRPNVGKS LFNRL A+V D PG+TRDR YG G ++++DTGG ++
Sbjct: 5 IVLVGRPNVGKSTLFNRLTRTRDALVADLPGLTRDRHYGHGKLGSKPYLVIDTGGFEPLA 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K IM +A RQ AI+E+ V+I +VDG++G
Sbjct: 65 KD--GIMYHMA---------------------------RQTEQAIDEADVVILVVDGRSG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LTA D+EIA+ LRK +D+ +++AVNK E G++ VS+F LG PL ISA G G
Sbjct: 96 LTALDKEIANRLRK--VDRPVLVAVNKSEGMSVGVV-VSDFHELGLGEPLAISAAHGEGV 152
Query: 345 GELLDLV---CSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
L+DL C+E + E D+V+ +AIVGRPNVGKS+++NAL+GEDR I
Sbjct: 153 RALIDLALEPCAEAVESEPESDVVK-------VAIVGRPNVGKSTLINALLGEDRVIAFD 205
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
GTTRDAI+ +F G+K+ LIDTAG+R+R + T E SV + +A+ + VV
Sbjct: 206 QPGTTRDAIEVDFER-GGKKYTLIDTAGLRRRGRVF---ETIEKFSVIKTLQAVEDAQVV 261
Query: 462 ALVIEAMACITEQ 474
LV++A I EQ
Sbjct: 262 ILVLDARQDIAEQ 274
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 29/154 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE + +VAIVGRPNVGKS L N L+G +R I D+PG TRD + G ++ L+DT
Sbjct: 171 PESDVVKVAIVGRPNVGKSTLINALLGEDRVIAFDQPGTTRDAIEVDFERGGKKYTLIDT 230
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + I E ++ T+ A+E++ V+I
Sbjct: 231 AGLRRRGRVFETI-EKFSVIKTL--------------------------QAVEDAQVVIL 263
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
++D + + D IA ++R++ + +++AVNK
Sbjct: 264 VLDARQDIAEQDAHIAAFIRES--GRALVVAVNK 295
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 373 AIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQK-FRLIDTAG-- 429
+I +VGRPNVGKS++ N L +V+ + G TRD G G K + +IDT G
Sbjct: 4 SIVLVGRPNVGKSTLFNRLTRTRDALVADLPGLTRDRHYGH--GKLGSKPYLVIDTGGFE 61
Query: 430 -IRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACIT 472
+ K + TE +AI +DVV LV++ + +T
Sbjct: 62 PLAKDGIMYHMARQTE--------QAIDEADVVILVVDGRSGLT 97
>gi|139439670|ref|ZP_01773083.1| Hypothetical protein COLAER_02111 [Collinsella aerofaciens ATCC
25986]
gi|133775011|gb|EBA38831.1| ribosome biogenesis GTPase Der [Collinsella aerofaciens ATCC 25986]
Length = 444
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 187/312 (59%), Gaps = 37/312 (11%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS L NRL + AIV + GVTRDR Y + W EF +VDTGG+
Sbjct: 3 PIVAVVGRPNVGKSTLVNRLAQTSDAIVHESRGVTRDRSYHTADWNGREFTIVDTGGI-- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P +D+ T+ I QA AA EE+ VI+F+VDG+
Sbjct: 61 ----EPLKSDDVFATS----------------------IRDQALAAAEEAAVILFVVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T DE +A L++ DK + L VNK ++P + + EF+SLG P P+SA+ G
Sbjct: 95 TGVTEEDESVARMLKR--CDKPVFLLVNKLDNPDRENDSIWEFYSLGIGEPTPLSALHGH 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD + + L + E +++ +E +AI+GRPN GKSS+ N ++G DR+IVS I
Sbjct: 153 GTGDLLDDIVALLPEEE--DEVADEFPDALNVAIIGRPNAGKSSLFNRILGADRSIVSNI 210
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT G+ +R++DTAGIRK++ + + E S+ R RAI R+DV
Sbjct: 211 AGTTRDAIDT-VVERNGKHYRMVDTAGIRKKSTVYEN---IEYYSMVRGLRAIDRADVAL 266
Query: 463 LVIEAMACITEQ 474
LV++A +TEQ
Sbjct: 267 LVVDASVGVTEQ 278
>gi|288803890|ref|ZP_06409315.1| ribosome-associated GTPase EngA [Prevotella melaninogenica D18]
gi|288333655|gb|EFC72105.1| ribosome-associated GTPase EngA [Prevotella melaninogenica D18]
Length = 437
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 181/310 (58%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRHAIVSDTAGTTRDRQYGKCQWNGREFSIVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I +Q A EE+ +++F+VD + G
Sbjct: 63 KSD-DIFED--------------------------AIRKQVLVATEEADLVLFVVDTETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + ++L NK ++ + Q +EF+ LG P+ ISA +G GT
Sbjct: 96 ITDWDEDVALILRRTKLP--VLLVANKVDNSGE-YYQAAEFYKLGLGEPICISAATGGGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD++ LK V E+ V+++ IP A+VGRPN GKSSI+NA +GEDR IV+ I+G
Sbjct: 153 GDLLDILLENLKDVP--EEAVDQD--IPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+I T +T G F L+DTAGIR++ ++ E SV R+ R+I S+V L+
Sbjct: 209 TTRDSIYTRYT-KFGFDFYLVDTAGIRRKNKVSED---LEFYSVMRSIRSIENSEVCILM 264
Query: 465 IEAMACITEQ 474
++A I Q
Sbjct: 265 LDATRGIEAQ 274
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 33/162 (20%)
Query: 155 IGNVPEHL----LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE 210
+ +VPE +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R
Sbjct: 163 LKDVPEEAVDQDIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYTKFG 222
Query: 211 HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAI 270
+F LVDT G+ + + + EDL + + ++ +I
Sbjct: 223 FDFYLVDTAGI----RRKNKVSEDLEFYSVM-----------------------RSIRSI 255
Query: 271 EESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
E S V I ++D G+ A D I +++N +K +++ VNK
Sbjct: 256 ENSEVCILMLDATRGIEAQDMNIFQLIQRN--NKSLVVVVNK 295
>gi|298373119|ref|ZP_06983109.1| ribosome-associated GTPase EngA [Bacteroidetes oral taxon 274 str.
F0058]
gi|298276023|gb|EFI17574.1| ribosome-associated GTPase EngA [Bacteroidetes oral taxon 274 str.
F0058]
Length = 438
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 176/310 (56%), Gaps = 40/310 (12%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL RAIV DE G TRDR YG+ W EF ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTLFNRLTKSRRAIVNDEAGTTRDRHYGKVEWNGKEFSVIDTGGWV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E I I RQ + AIEE+ VI+F+VD +G
Sbjct: 62 ---------------VGSEDI-----------FEEEINRQVSIAIEEADVILFVVDVLSG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D +A LRK+ K +I+ NK ++ Q +EF+SLG P +S+++G G+
Sbjct: 96 VTDLDMFVAQVLRKS--GKNVIVVANKVDTFDLQ-YQATEFYSLGLGDPFILSSVNGLGS 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V + K E E + +P +A+VGRPN GKSS++NA + ++R IV+ I+G
Sbjct: 153 GDLLDEVLNRFPK---NEKEAENLDDLPKLAVVGRPNAGKSSLVNAFLDDNRNIVTEIAG 209
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+I T + G F L+DTAGIRK+A + E SV RA RAI SDV L+
Sbjct: 210 TTRDSIYTRY-NKFGYDFYLVDTAGIRKKAKV---NEDVEYYSVIRAIRAIENSDVCVLM 265
Query: 465 IEAMACITEQ 474
I+A I Q
Sbjct: 266 IDAERGIESQ 275
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 29/152 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP++A+VGRPN GKS+L N + NR IV + G TRD +Y R ++F LVDT G+
Sbjct: 176 LPKLAVVGRPNAGKSSLVNAFLDDNRNIVTEIAGTTRDSIYTRYNKFGYDFYLVDTAGI- 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + ED+ + I +A AIE S V + ++D
Sbjct: 235 ---RKKAKVNEDVEYYSVI-----------------------RAIRAIENSDVCVLMIDA 268
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+ G+ + D I ++KN K +++ VNK +
Sbjct: 269 ERGIESQDLNIFSLIQKN--KKGLVVCVNKWD 298
>gi|223557988|gb|ACM90994.1| GTPase [uncultured bacterium URE4]
Length = 424
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 175/297 (58%), Gaps = 44/297 (14%)
Query: 174 VGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIME 233
+GKS LFNRLVG +AIV + GVTRDR YG+ W EF +VDTGG + + ++ E
Sbjct: 1 MGKSTLFNRLVGMRQAIVDETAGVTRDRHYGKCEWCGTEFSVVDTGGY---TSNSDDVFE 57
Query: 234 DLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEI 293
D I RQ A+EE+ V++F+ + Q G+T D EI
Sbjct: 58 D--------------------------AIRRQVVIAVEEADVVLFMCEAQTGITDYDAEI 91
Query: 294 ADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGTGELLDLVC 352
AD LR++ K ++L VNK ++ K + +F+ LG + ISA +G+GTG+LLD +
Sbjct: 92 ADLLRRS--KKPVVLCVNKVDTGEK-MYDAYDFYGLGLGEVWTISAANGSGTGDLLDEIV 148
Query: 353 SELKKVEGTEDLVEEENR--IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI 410
L K D+ EEE+ IP IAIVGRPNVGKSS+ NAL+GE+R IV+P++GTTRD+I
Sbjct: 149 KVLPK-----DVPEEEDHSDIPHIAIVGRPNVGKSSLTNALLGEERNIVTPVAGTTRDSI 203
Query: 411 DTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEA 467
T + G +F L+DTAG+RKRA + E SV RA R I SDV L+I+A
Sbjct: 204 ST-YYNKFGHEFMLVDTAGMRKRAKVTED---LEFYSVLRAMRTIEHSDVCILMIDA 256
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 74/152 (48%), Gaps = 33/152 (21%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGG 220
+P +AIVGRPNVGKS+L N L+G R IV G TRD + Y F HEFMLVDT G
Sbjct: 164 IPHIAIVGRPNVGKSSLTNALLGEERNIVTPVAGTTRDSISTYYNKF--GHEFMLVDTAG 221
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ + + + EDL + + +A IE S V I ++
Sbjct: 222 M----RKRAKVTEDLEFYSVL-----------------------RAMRTIEHSDVCILMI 254
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
D G+ A D I + ++KN K ++ VNK
Sbjct: 255 DATLGMEAQDMNIFNIIQKN--RKGCVIVVNK 284
>gi|327312576|ref|YP_004328013.1| ribosome biogenesis GTPase Der [Prevotella denticola F0289]
gi|326944058|gb|AEA19943.1| ribosome biogenesis GTPase Der [Prevotella denticola F0289]
Length = 437
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 131/310 (42%), Positives = 181/310 (58%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRHAIVSDTAGTTRDRQYGKCQWNGREFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I +Q A EE+ +++FLVD + G
Sbjct: 63 KSD-DIFED--------------------------AIRKQVLVATEEADLVLFLVDTETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + ++L NK ++ + Q +EF+ LG P+ +SA +G GT
Sbjct: 96 VTDWDEDVAMILRRTKLP--VLLVANKVDNSGE-YYQAAEFYKLGLGEPICVSAATGGGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD++ +LK + ++ V+++ IP A+VGRPN GKSSI+NA +GEDR IV+ I+G
Sbjct: 153 GDLLDILLEKLK--DAPDESVDQD--IPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+I T +T G F L+DTAGIR++ + E SV R+ R+I SDV L+
Sbjct: 209 TTRDSIYTRYT-KFGFDFYLVDTAGIRRKNKVTED---LEFYSVMRSIRSIENSDVCILM 264
Query: 465 IEAMACITEQ 474
++A I Q
Sbjct: 265 LDATRGIEAQ 274
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 29/150 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT G+
Sbjct: 175 IPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYTKFGFDFYLVDTAGI- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ +IE S V I ++D
Sbjct: 234 ---RRKNKVTEDLEFYSVM-----------------------RSIRSIENSDVCILMLDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNK 312
G+ A D I +++N +K +++ VNK
Sbjct: 268 TRGIEAQDMNIFQLIQRN--NKSLVVVVNK 295
>gi|325855153|ref|ZP_08171776.1| ribosome biogenesis GTPase Der [Prevotella denticola CRIS 18C-A]
gi|325483890|gb|EGC86834.1| ribosome biogenesis GTPase Der [Prevotella denticola CRIS 18C-A]
Length = 437
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 131/310 (42%), Positives = 181/310 (58%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRHAIVSDTAGTTRDRQYGKCQWNGREFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I +Q A EE+ +++FLVD + G
Sbjct: 63 KSD-DIFED--------------------------AIRKQVLVATEEADLVLFLVDTETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + ++L NK ++ + Q +EF+ LG P+ +SA +G GT
Sbjct: 96 VTDWDEDVAMILRRTKLP--VLLVANKVDNSGE-YYQAAEFYKLGLGEPICVSAATGGGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD++ +LK + ++ V+++ IP A+VGRPN GKSSI+NA +GEDR IV+ I+G
Sbjct: 153 GDLLDILLEKLK--DAPDESVDQD--IPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+I T +T G F L+DTAGIR++ + E SV R+ R+I SDV L+
Sbjct: 209 TTRDSIYTRYT-KFGFDFYLVDTAGIRRKNKVTED---LEFYSVMRSIRSIENSDVCILM 264
Query: 465 IEAMACITEQ 474
++A I Q
Sbjct: 265 LDATRGIEAQ 274
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 29/150 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT G+
Sbjct: 175 IPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYTKFGFDFYLVDTAGI- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ +IE S V I ++D
Sbjct: 234 ---RRKNKVTEDLEFYSVM-----------------------RSIRSIENSDVCILMLDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNK 312
G+ A D I +++N +K +++ VNK
Sbjct: 268 TRGIEAQDMNIFQLIQRN--NKSLVVVVNK 295
>gi|321496287|gb|EAQ39318.2| GTP-binding protein EngA [Dokdonia donghaensis MED134]
Length = 450
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 132/303 (43%), Positives = 182/303 (60%), Gaps = 41/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRLV AIV GVTRDR YG++ W EF ++DTGG +
Sbjct: 20 VAIVGRPNVGKSTFFNRLVQRREAIVDAVSGVTRDRHYGKTDWNGREFTVIDTGGYV--- 76
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G + I + I++Q AI+E+ IIF+VD + G
Sbjct: 77 ---------------VGSDDI-----------FEAEIDKQVELAIDEADAIIFMVDVEHG 110
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T DEE+A+ LR++ K I LAVNK ++ ++ V EF++LG I+A +G+GT
Sbjct: 111 ITGMDEEVANLLRRS--KKPIFLAVNKVDNNKRAADAV-EFYNLGLGDFYTIAATNGSGT 167
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V L + E EE+ +P A+VGRPN GKSS +NAL+GE+R IV+ I+G
Sbjct: 168 GDLLDAVVEALPEKEEE----SEEDELPRFAVVGRPNAGKSSFINALIGEERYIVTDIAG 223
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDA+DT++ G +F L+DTAGIR++A + E SV R+ RAI +DVV LV
Sbjct: 224 TTRDAMDTKYN-RYGFEFNLVDTAGIRRKAKVKED---LEFYSVMRSVRAIEHADVVLLV 279
Query: 465 IEA 467
++A
Sbjct: 280 VDA 282
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 77/167 (46%), Gaps = 35/167 (20%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM---YGRSFWGEHEFMLVDTG 219
LPR A+VGRPN GKS+ N L+G R IV D G TRD M Y R +G EF LVDT
Sbjct: 190 LPRFAVVGRPNAGKSSFINALIGEERYIVTDIAGTTRDAMDTKYNR--YG-FEFNLVDTA 246
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIE + V++ +
Sbjct: 247 GI----RRKAKVKEDLEFYSVM-----------------------RSVRAIEHADVVLLV 279
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
VD G + I WL + K I++ VNK + K + EF
Sbjct: 280 VDATRGFDGQVQNIF-WLAER-NRKGIVILVNKWDLVEKKTNTMKEF 324
>gi|152995389|ref|YP_001340224.1| small GTP-binding protein [Marinomonas sp. MWYL1]
gi|189037150|sp|A6VV10.1|DER_MARMS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|150836313|gb|ABR70289.1| small GTP-binding protein [Marinomonas sp. MWYL1]
Length = 445
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 189/315 (60%), Gaps = 39/315 (12%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P +A+VGRPNVGKS LFN+L A+V D PG+TRDR YG GEHEF+++DTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNQLTRSRDALVADYPGLTRDRKYGDGKLGEHEFIVIDTGG- 59
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+S + I E +A RQ+ AIEE+ V++FLVD
Sbjct: 60 --ISGDEQGIDEKMA---------------------------RQSLLAIEEADVVLFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAIS 340
G+ GL ADE IA LR++ +K + L VNK + + I +++F+SLGF L PI+A
Sbjct: 91 GRHGLNPADEMIASHLRRS--NKQVSLVVNKTDGINEDI-ALADFYSLGFGELHPIAASH 147
Query: 341 GTGTGELLDLVCSEL-KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G G L+D V ++VE ++ + E+R I +VGRPNVGKS+++N ++GEDR +V
Sbjct: 148 GKGVHVLIDKVMLPFAERVEEAKNQISIESRGIRIGVVGRPNVGKSTLVNRMLGEDRVVV 207
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
+ GTTRD++ + + +++ LIDTAGIR+R + + E S+ +A +AI+ ++
Sbjct: 208 YDMPGTTRDSVYIPYVRND-KEYTLIDTAGIRRRKHVKEA---VEKFSIVKALQAIQDAN 263
Query: 460 VVALVIEAMACITEQ 474
VV +VI++ + EQ
Sbjct: 264 VVIVVIDSHENLVEQ 278
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 36/196 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+ +VGRPNVGKS L NR++G +R +V D PG TRD +Y + E+ L+DT G+
Sbjct: 181 RIGVVGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSVYIPYVRNDKEYTLIDTAGIRR- 239
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K +E +I +A AI+++ V+I ++D
Sbjct: 240 RKHVKEAVEKFSIV--------------------------KALQAIQDANVVIVVIDSHE 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG---IMQVSEFWSLGFSPLP----IS 337
L D + ++ + +I+A+NK + +K ++ LGF P IS
Sbjct: 274 NLVEQDLHMIGYVLD--AGRGVIIAINKWDGLKKDDREHIKSEVERRLGFVPYAKVHYIS 331
Query: 338 AISGTGTGELLDLVCS 353
A+ GTG G+L D + S
Sbjct: 332 ALHGTGVGDLYDTIES 347
>gi|366166680|ref|ZP_09466435.1| GTP-binding protein Der [Acetivibrio cellulolyticus CD2]
Length = 440
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 180/312 (57%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS FN L G +IV D PGVTRDR+Y W +F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTFFNYLAGRRISIVEDTPGVTRDRIYTEVEWRNRKFTLIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S+ + IM+ + + QA AIE + VI+F+VD +
Sbjct: 64 YSEDK--IMQQM---------------------------KSQAEIAIETANVIVFMVDRK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
GLTA+D E+A LRK+ K +IL VNK + + +V EF++LG L +S+I G
Sbjct: 95 DGLTASDNEVATLLRKS--KKPVILVVNKVDRVGELPAEVYEFYNLGIGDLMTVSSIHGL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD E+ K E E + + +A++G+PN GKSS++N ++GEDR IVS I
Sbjct: 153 GMGDLLD----EIYKYFPDETEEEYDEEVIKVAVIGKPNAGKSSLINKVLGEDRVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT EG KF IDTAGIR+++ I E S R++ AI R+DV
Sbjct: 209 PGTTRDAIDTYVENEEG-KFVFIDTAGIRRQSKI---NENIERYSTIRSWTAIERADVCL 264
Query: 463 LVIEAMACITEQ 474
++I+A +TEQ
Sbjct: 265 IMIDAEEGVTEQ 276
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA++G+PN GKS+L N+++G +R IV D PG TRD + E +F+ +DT G+
Sbjct: 179 KVAVIGKPNAGKSSLINKVLGEDRVIVSDIPGTTRDAIDTYVENEEGKFVFIDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ Q I E++ +TI ++ AIE + V + ++D +
Sbjct: 236 -RRQSKINENIERYSTI-----------------------RSWTAIERADVCLIMIDAEE 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGF---SP-LP 335
G+T D +IA + + K I+ VNK + K + E+ LGF +P +
Sbjct: 272 GVTEQDTKIAGYAHEQ--GKASIVVVNKWDLVEKNTGTLEEYRKTVLEKLGFMLYAPVMF 329
Query: 336 ISAISGTGTGELLDL 350
ISA SG ++ +L
Sbjct: 330 ISAKSGQRVNKVFEL 344
>gi|257063685|ref|YP_003143357.1| hypothetical protein Shel_09700 [Slackia heliotrinireducens DSM
20476]
gi|256791338|gb|ACV22008.1| small GTP-binding protein domain/GTP-binding conserved hypothetical
protein [Slackia heliotrinireducens DSM 20476]
Length = 438
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/313 (42%), Positives = 182/313 (58%), Gaps = 39/313 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS NR+ + AIV + GVTRDR Y + W F L+DTGG
Sbjct: 3 LPIVAVVGRPNVGKSTFVNRIAHADDAIVHEMRGVTRDRSYHNADWRGVHFTLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + +A S I QA A +E+ VI+F+VDG
Sbjct: 61 -----------------------IEMGDDDA----FQSSIRDQAFMAADEADVILFMVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+TA DEE+A LRK +D + L VNK ++P K + + EF+SLG P IS+ G
Sbjct: 94 KTGITADDEEVARVLRK--VDTPVFLLVNKMDNPSK-MEENWEFYSLGLGDPRSISSTHG 150
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG+LLD V + L+++ ED EE +AI+GRPN GKSS+ N L+G DR+IVS
Sbjct: 151 HGTGDLLDEVVAILRELPEREDEPAEEG--INVAIIGRPNAGKSSLTNRLIGRDRSIVSD 208
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT +G+ + ++DTAG+R+++ I E S RA RAI R+DV
Sbjct: 209 VAGTTRDAIDTRVE-HDGKVYTIVDTAGLRRKSQIDED---VEYYSYVRAMRAIDRADVA 264
Query: 462 ALVIEAMACITEQ 474
LV++A +T+Q
Sbjct: 265 ILVMDATLGLTDQ 277
>gi|239623754|ref|ZP_04666785.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521785|gb|EEQ61651.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 442
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 190/312 (60%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN + G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNVIAGDTISIVKDTPGVTRDRIYADCTWLDMNFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ T++ +++M QA AI + VIIF+VD +
Sbjct: 62 ----EPD-------------------TKDIILSQM----REQAEIAISTADVIIFIVDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LRK+ K ++LAVNK +S K V EF++LG P+P+SA S
Sbjct: 95 QGLVDSDAKVADMLRKS--RKPVVLAVNKVDSIAKFGNDVYEFYNLGIGEPVPVSAASRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V +K +G E + EEE+ P IA+VG+PNVGKSSI+N L+GE+R IVS I
Sbjct: 153 GIGDLLDEV---VKHFDG-EKIEEEEDDRPRIAVVGKPNVGKSSIINKLLGENRVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DTE G + IDTAG+R+++ I E S+ R A+ R+D+V
Sbjct: 209 AGTTRDAVDTEIV-YNGTPYVFIDTAGLRRKSRIKEE---LERYSIIRTVTAVERADIVV 264
Query: 463 LVIEAMACITEQ 474
+VI+A+ +TEQ
Sbjct: 265 VVIDAVEGVTEQ 276
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+A+VG+PNVGKS++ N+L+G NR IV D G TRD + + ++ +DT G+
Sbjct: 178 PRIAVVGKPNVGKSSIINKLLGENRVIVSDIAGTTRDAVDTEIVYNGTPYVFIDTAGL-- 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E+L ++ R + +ER +
Sbjct: 236 --RRKSRIKEEL---------------ERYSIIRTVTAVERADIVVVVIDA--------V 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSPLP--- 335
G+T D +IA + K +I+AVNK ++ K + E+ +L F P
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGVIVAVNKWDAIEKTDKTIYEYTNKIKETLSFMPYAEYI 328
Query: 336 -ISAISGTGTGELLDLV 351
ISA +G +L +++
Sbjct: 329 FISAATGQRLPKLFEMI 345
>gi|385799696|ref|YP_005836100.1| ribosome-associated GTPase EngA [Halanaerobium praevalens DSM 2228]
gi|309389060|gb|ADO76940.1| ribosome-associated GTPase EngA [Halanaerobium praevalens DSM 2228]
Length = 438
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/310 (41%), Positives = 184/310 (59%), Gaps = 40/310 (12%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRLVGG RAIV EP VTRDR+YG + W +F ++DTGG+
Sbjct: 6 VAIVGRPNVGKSTLFNRLVGGRRAIVEGEPNVTRDRIYGETEWLGKKFNVIDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
++ D ++ + I+ QA A+EE+ +I+F+VD + G
Sbjct: 62 -----VLHD--------------------NDKIKNQIKYQAEIAMEEADLILFVVDSRTG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
+T DE+IA L + +K +IL VNK E EF+SLGF +P ISA G T
Sbjct: 97 MTGVDEDIAQLLYRT--NKEVILVVNKVEDFSNQEEIGWEFYSLGFGTPFLISAEHGKNT 154
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V + L ++E ED ++ N IA++G+PNVGKSS++N L+G+ R IVS + G
Sbjct: 155 GQLLDQVKANLPEIETEEDDDDKIN----IAVIGKPNVGKSSLVNHLIGKKRVIVSDMPG 210
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDA+DT + F IDTAG+R+++ + E S RA R++ R+D V ++
Sbjct: 211 TTRDAVDTMIKWKD-ISFNFIDTAGLRRKSRVKED---VEYYSNLRALRSVDRADAVLMM 266
Query: 465 IEAMACITEQ 474
I+A +T+Q
Sbjct: 267 IDAQEGVTDQ 276
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 36/199 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A++G+PNVGKS+L N L+G R IV D PG TRD + W + F +DT G+
Sbjct: 180 IAVIGKPNVGKSSLVNHLIGKKRVIVSDMPGTTRDAVDTMIKWKDISFNFIDTAGL---- 235
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + + ED+ + + +A +++ + ++ ++D Q G
Sbjct: 236 RRKSRVKEDVEYYSNL-----------------------RALRSVDRADAVLMMIDAQEG 272
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSE---FWSLGF-SPLPISAI 339
+T D++IA + K +++A+NK + K G M ++ L F + +P++ I
Sbjct: 273 VTDQDKKIAGYAHDE--GKAMVIAINKWDLMEKDSGTMDRYTDEVYYQLKFLNYVPVTYI 330
Query: 340 SGTGTGELLDLVCSELKKV 358
S TGE +D + S L+ V
Sbjct: 331 SAL-TGERIDELLSLLEFV 348
>gi|293604545|ref|ZP_06686950.1| GTP-binding protein EngA [Achromobacter piechaudii ATCC 43553]
gi|292817126|gb|EFF76202.1| GTP-binding protein EngA [Achromobacter piechaudii ATCC 43553]
Length = 454
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/320 (42%), Positives = 184/320 (57%), Gaps = 46/320 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL A+V D G+TRDR YG GE F+ +DTGG
Sbjct: 5 PVVALVGRPNVGKSTLFNRLTRSRAALVADFSGLTRDRHYGEGRVGEIPFIAIDTGGFEP 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K +GI L + RQ AI E+ V++FLVD +
Sbjct: 65 VAK-----------------DGILLE------------MARQTRQAIAEADVVVFLVDAR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
AGL A D EIA LRK+ + ++LAVNK E G +SEF LG P PISA G
Sbjct: 96 AGLNAHDHEIAQLLRKSGQQR-VLLAVNKAEGMGLG-PAISEFHELGLGQPYPISAAHGD 153
Query: 343 GTGELLDLVCSELKKV--------EGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGE 394
G +L++L +L + EG DL E ++RI +AIVGRPNVGKS+++N L+GE
Sbjct: 154 GIVDLIELALKDLAEPPAEAEPFEEGEGDL-EHDHRI-KLAIVGRPNVGKSTLINTLMGE 211
Query: 395 DRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRA 454
+R I + GTTRDAI+ +F +G+++ LIDTAG+RKR + + E SV + +A
Sbjct: 212 ERVIAFDLPGTTRDAIEIDFD-RDGRRYTLIDTAGLRKRGKVFEA---VEKFSVIKTLQA 267
Query: 455 IRRSDVVALVIEAMACITEQ 474
I S+VV L+++A I+EQ
Sbjct: 268 IEASNVVLLMLDAHTEISEQ 287
>gi|256827122|ref|YP_003151081.1| GTP-binding protein [Cryptobacterium curtum DSM 15641]
gi|256583265|gb|ACU94399.1| small GTP-binding protein domain/GTP-binding conserved hypothetical
protein [Cryptobacterium curtum DSM 15641]
Length = 444
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/319 (41%), Positives = 180/319 (56%), Gaps = 41/319 (12%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+ +HL VA+VGRPNVGKS NR+V + AIV GVTRDR Y + W H F L+D
Sbjct: 1 MAKHL---VAVVGRPNVGKSTFVNRIVHSDEAIVHAMRGVTRDRSYHDADWNGHHFTLID 57
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
TG GI + +A + I QA A E VI+
Sbjct: 58 TG-------------------------GIEMGDEDA----FQTSIRNQAFTAARECDVIL 88
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPI 336
LVDG+ G+TA DEE+A LR+ +++ VNK ++ + EF+ LG P PI
Sbjct: 89 LLVDGRTGITADDEEVARILRREKAP--VLVVVNKLDNLDTA-DAMYEFYRLGLGDPWPI 145
Query: 337 SAISGTGTGELLDLVCSELKKVEGTEDL-VEEENRIPAIAIVGRPNVGKSSILNALVGED 395
SAI GTGTG+LLD V +EL KV E ++++ I +AI+GRPN GKSS+ N L D
Sbjct: 146 SAIHGTGTGDLLDAVVAELDKVTPNETCENDDDDEIINVAIIGRPNAGKSSLTNMLSRND 205
Query: 396 RTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAI 455
R+IVS ++GTTRDAIDT EG+ +RL+DTAG+R+++ I E R+ RAI
Sbjct: 206 RSIVSDVAGTTRDAIDT-LVAHEGRAYRLVDTAGLRRKSKIDED---VEYYGFVRSMRAI 261
Query: 456 RRSDVVALVIEAMACITEQ 474
R+DVV L+++ +T+Q
Sbjct: 262 DRADVVLLMVDGTLGLTDQ 280
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 37/194 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+GRPN GKS+L N L +R+IV D G TRD + + LVDT G+ S
Sbjct: 184 VAIIGRPNAGKSSLTNMLSRNDRSIVSDVAGTTRDAIDTLVAHEGRAYRLVDTAGLRRKS 243
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K I ED+ + ++ AI+ + V++ +VDG G
Sbjct: 244 K----IDEDVEYYGFV-----------------------RSMRAIDRADVVLLMVDGTLG 276
Query: 286 LTAADEEIADWLRKNYMDKFIIL-------AVNKCESPRKGIMQVSEFWSLGFSP-LPIS 337
LT D+ IA + + I+L ++ E+ R I + F +GF+P + +S
Sbjct: 277 LTDQDQRIAGFAHERGCAMVIVLNKWDIVEGADRKEAVRDQITESLRF--VGFAPVVAVS 334
Query: 338 AISGTGTGELLDLV 351
A++G T + + +
Sbjct: 335 ALTGKNTHRIWEAI 348
>gi|392969404|ref|ZP_10334819.1| ribosome-associated GTPase EngA [Fibrisoma limi BUZ 3]
gi|387841598|emb|CCH56877.1| ribosome-associated GTPase EngA [Fibrisoma limi BUZ 3]
Length = 435
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 179/310 (57%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL +AI+ ++ GVTRDR YG + W + F ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTLFNRLTEQRQAIMDNQSGVTRDRHYGYAEWTDKRFTVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E I I Q AIEE+ V++F+VD G
Sbjct: 62 ---------------VGSEDI-----------FEGAIREQVEIAIEEATVLLFVVDTMTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT D++ A+ LR++ K + + NK E+ + SEF++LG P PIS+ +G+GT
Sbjct: 96 LTGLDQDFANVLRRS--KKPVYVVANKAETFDRQ-QAASEFYALGLGDPHPISSQTGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V + EG ED E IP IAI+GRPNVGKSS LN L G +R+IV+ I+G
Sbjct: 153 GDLLDEVVKHFQS-EGVED---PEAGIPRIAILGRPNVGKSSFLNVLTGRERSIVTDIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAI+T + G+ F L DTAGIR++A I + E S+ R+ +A+ SDV ++
Sbjct: 209 TTRDAINTRYKA-YGKDFILTDTAGIRRKARIQDN---IEFYSILRSIKAMEESDVCIVM 264
Query: 465 IEAMACITEQ 474
++A + Q
Sbjct: 265 LDATRGLEAQ 274
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 76/160 (47%), Gaps = 29/160 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE +PR+AI+GRPNVGKS+ N L G R+IV D G TRD + R +F+L DT
Sbjct: 171 PEAGIPRIAILGRPNVGKSSFLNVLTGRERSIVTDIAGTTRDAINTRYKAYGKDFILTDT 230
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ ++ Q NI E +I +I A+EES V I
Sbjct: 231 AGIRRKARIQDNI-EFYSILRSI--------------------------KAMEESDVCIV 263
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
++D GL A D I + K +++ VNK ++ K
Sbjct: 264 MLDATRGLEAQDLNIIGQAVR--AKKGVVIMVNKWDAVEK 301
>gi|404485333|ref|ZP_11020531.1| GTPase Der [Barnesiella intestinihominis YIT 11860]
gi|404338768|gb|EJZ65213.1| GTPase Der [Barnesiella intestinihominis YIT 11860]
Length = 437
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/311 (43%), Positives = 176/311 (56%), Gaps = 43/311 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL +AIV +E G TRDR YG+ W EF ++DTGG V+N
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRKAIVNEEAGTTRDRQYGKVEWCGQEFSVIDTGGWVVN- 63
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+I E+ I +Q AIEE+ VI+F+VD +
Sbjct: 64 ---SEDIFEE--------------------------EINKQVALAIEEADVILFMVDVKT 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
G D+ +A LR++ DK +IL NK +S + +EF+S G P +SA SG+G
Sbjct: 95 GAVDLDDHVAAILRRS--DKPVILVANKADS-NEWQYNAAEFYSFGLGDPFCVSAASGSG 151
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
TG+LLD + K +E +EE IP A+VGRPN GKSSI+NA +GEDR IV+ I+
Sbjct: 152 TGDLLDEILKRFTK--KSEPEIEEN--IPRFAVVGRPNAGKSSIINAFIGEDRYIVTDIA 207
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRD+I T + G F L+DTAGIRK+ + E SV R+ RAI SDV L
Sbjct: 208 GTTRDSIYTRY-DKFGFNFYLVDTAGIRKKGKVTED---LEYYSVIRSIRAIEASDVCIL 263
Query: 464 VIEAMACITEQ 474
+I+A I Q
Sbjct: 264 MIDATRGIEGQ 274
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 72/153 (47%), Gaps = 29/153 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR A+VGRPN GKS++ N +G +R IV D G TRD +Y R F LVDT
Sbjct: 172 EENIPRFAVVGRPNAGKSSIINAFIGEDRYIVTDIAGTTRDSIYTRYDKFGFNFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + I ++ AIE S V I +
Sbjct: 232 GI----RKKGKVTEDLEYYSVI-----------------------RSIRAIEASDVCILM 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
+D G+ D I ++KN K +++ VNK
Sbjct: 265 IDATRGIEGQDLNIFSLIQKN--KKGLVVCVNK 295
>gi|376294861|ref|YP_005166091.1| ribosome-associated GTPase EngA [Desulfovibrio desulfuricans ND132]
gi|323457422|gb|EGB13287.1| ribosome-associated GTPase EngA [Desulfovibrio desulfuricans ND132]
Length = 505
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/319 (40%), Positives = 181/319 (56%), Gaps = 41/319 (12%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VA+VGRPNVGKS LFNRL+ +R+I D PGVTRDR+YG GE F LVDTGG+
Sbjct: 1 MLPIVALVGRPNVGKSTLFNRLLRKSRSITHDLPGVTRDRIYGECIMGETRFDLVDTGGM 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S++ P + +D I QA AI E+ I+F+VD
Sbjct: 61 VLESEATPELSKDFE-----------------------DEIFEQAQEAINEANAIVFVVD 97
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISG 341
G+ GLT D + A+++R++ K +++ +NK + +EF LG LP+SA G
Sbjct: 98 GKEGLTPLDRQAAEFVRRS--GKPVLMLINKVDGSEFEAHMTAEFHELGIEFLPVSAAHG 155
Query: 342 TGTGELLDLVCSELKKVEGTEDL---VEEENRIPA---IAIVGRPNVGKSSILNALVGED 395
E+ D V + EDL VEE++ + + ++GRPN GKSSI+NAL+G+D
Sbjct: 156 YNLHEVRDRVRRFV------EDLGIPVEEDDGVEKGLRLTMLGRPNAGKSSIINALIGKD 209
Query: 396 RTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAI 455
R IVS ++GTTRD+ID F G+++ +DTAG+RKRA I E +SV RA +
Sbjct: 210 RLIVSDVAGTTRDSIDVTFE-KGGKRYTFVDTAGVRKRANIQDH---LEKISVIRALKNS 265
Query: 456 RRSDVVALVIEAMACITEQ 474
+RSDV L I+ + Q
Sbjct: 266 KRSDVTVLTIDITLGVGRQ 284
>gi|342217218|ref|ZP_08709865.1| ribosome-associated GTPase EngA [Peptoniphilus sp. oral taxon 375
str. F0436]
gi|341588108|gb|EGS31508.1| ribosome-associated GTPase EngA [Peptoniphilus sp. oral taxon 375
str. F0436]
Length = 440
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 185/310 (59%), Gaps = 42/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V IVG+PNVGKS+LFN++VG +I D PGVTRDR+YGR+ W EF+L+DTGG L+V
Sbjct: 6 VCIVGKPNVGKSSLFNKIVGQRISITEDTPGVTRDRIYGRASWLGREFILIDTGG-LDV- 63
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS M+++ + QA A+E S VIIFLVDG
Sbjct: 64 KSDDTFMKNIRL---------------------------QADIALETSNVIIFLVDGVES 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+TA D ++A+ LR+ +K +ILAVNK +S +K + +F+ LGF P+ +SA G G
Sbjct: 97 VTAMDRDLANRLRQT--NKKVILAVNKLDS-KKTKENMYDFYELGFGEPIFVSAEQGQGI 153
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V + V+ ED + +I ++ +G+PNVGKSS++N ++GE+R IV+ I G
Sbjct: 154 GDLLDKVIEDFPVVDPDED----DPKI-RVSFIGKPNVGKSSLINYILGENRNIVTNIPG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+ID+ FT + + +DTAG+RKR I E S R +I RS + L+
Sbjct: 209 TTRDSIDSYFTYKD-TDYIFVDTAGLRKRKKIEEK---IERYSAVRTLSSIDRSHICVLM 264
Query: 465 IEAMACITEQ 474
++A I+EQ
Sbjct: 265 VDATEGISEQ 274
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RV+ +G+PNVGKS+L N ++G NR IV + PG TRD + + + +++ VDT G+
Sbjct: 177 RVSFIGKPNVGKSSLINYILGENRNIVTNIPGTTRDSIDSYFTYKDTDYIFVDTAGLRKR 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + I R +AV + S I+ S + + +VD
Sbjct: 237 KKIEEKI------------------ERYSAVRTLSS---------IDRSHICVLMVDATE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI-------MQVSEFWSLG-FSPLP- 335
G++ D +I + +K +I+AVNK ++ K ++ E S ++PL
Sbjct: 270 GISEQDTKIMGYAHD--QNKGLIIAVNKWDAVEKETNTMRAYEKEIREKLSFASYAPLVF 327
Query: 336 ISAISGTGTGELLDLV 351
ISA +G +LLDL+
Sbjct: 328 ISAKTGQRVTQLLDLI 343
>gi|160939128|ref|ZP_02086479.1| hypothetical protein CLOBOL_04022 [Clostridium bolteae ATCC
BAA-613]
gi|158438091|gb|EDP15851.1| hypothetical protein CLOBOL_04022 [Clostridium bolteae ATCC
BAA-613]
Length = 442
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 186/312 (59%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN + G +IV D PGVTRDR+Y W F L+DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNVIAGDTISIVKDTPGVTRDRIYADCDWLNMNFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ +D+ + S + QA AI + VIIF+VD +
Sbjct: 62 ----EPD-SKDIIL----------------------SQMREQAEIAISTADVIIFIVDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LRK++ K ++LAVNK +S K V EF++LG P+ +SA S
Sbjct: 95 QGLVDSDSKVADLLRKSH--KPVVLAVNKVDSVAKYGNDVYEFYNLGIGEPVAVSAASRL 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V +K + + EE+ R P IA+VG+PNVGKSSI+N LVGE+R IVS I
Sbjct: 153 GIGDLLDEV---VKHFDSEQMEEEEDER-PRIAVVGKPNVGKSSIINKLVGENRVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+DTE EG + IDTAG+R+++ I E S+ R A+ R+DVV
Sbjct: 209 AGTTRDAVDTEVI-HEGTPYVFIDTAGLRRKSKIKEE---LERYSIIRTVSAVERADVVV 264
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 265 VVIDATEGVTEQ 276
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+A+VG+PNVGKS++ N+LVG NR IV D G TRD + ++ +DT G+
Sbjct: 178 PRIAVVGKPNVGKSSIINKLVGENRVIVSDIAGTTRDAVDTEVIHEGTPYVFIDTAGLRR 237
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + +E +I T+ +A+E + V++ ++D
Sbjct: 238 KSKIKEE-LERYSIIRTV--------------------------SAVERADVVVVVIDAT 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP----L 334
G+T D +IA + K II+AVNK ++ K + E+ L F P L
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGIIVAVNKWDAIEKTDKTIYEYTRKIKEVLSFIPYAEYL 328
Query: 335 PISAISGTGTGELLDLV 351
ISA +G +L +++
Sbjct: 329 FISAATGQRLTKLFEMI 345
>gi|404451046|ref|ZP_11016020.1| ribosome-associated GTPase EngA [Indibacter alkaliphilus LW1]
gi|403763339|gb|EJZ24307.1| ribosome-associated GTPase EngA [Indibacter alkaliphilus LW1]
Length = 437
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/312 (41%), Positives = 180/312 (57%), Gaps = 43/312 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRLV +AI + GVTRDR YG + WG F ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLVEERKAIEDNVSGVTRDRHYGHATWGGKFFSVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E + A I +Q A+EE+ VI+F+VD G
Sbjct: 62 ---------------MGSEDVYEAE-----------IRKQVKLALEEANVILFVVDCHDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP---LPISAISGT 342
LT D++ A+ LR + +K + + NK ++P K + +EF+++G PI+A SG+
Sbjct: 96 LTDMDKDFANVLRTS--EKPVFIVANKADTPEKS-LAAAEFYAMGIGENEVFPIAAASGS 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD V EG ED E+ IP IAI+GRPNVGKSS LNAL+G++R+IV+
Sbjct: 153 GTGDLLDEVIKHFPD-EGVED---PEDGIPKIAILGRPNVGKSSFLNALLGKERSIVTNE 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAI T + GQ F + DTAGIRK+A + E SV R+ R + SDV+
Sbjct: 209 AGTTRDAIHTRYK-LYGQDFIITDTAGIRKKAKVKED---IEFYSVMRSLRTLEESDVLI 264
Query: 463 LVIEAMACITEQ 474
++++A + Q
Sbjct: 265 VMVDASRGLESQ 276
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 29/154 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE +P++AI+GRPNVGKS+ N L+G R+IV +E G TRD ++ R +F++ DT
Sbjct: 173 PEDGIPKIAILGRPNVGKSSFLNALLGKERSIVTNEAGTTRDAIHTRYKLYGQDFIITDT 232
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + + ED+ + + ++ +EES V+I
Sbjct: 233 AGI----RKKAKVKEDIEFYSVM-----------------------RSLRTLEESDVLIV 265
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
+VD GL + D + KN +K I++ VNK
Sbjct: 266 MVDASRGLESQDMNLISLGIKN--NKGIMIMVNK 297
>gi|292670962|ref|ZP_06604388.1| GTP-binding protein EngA [Selenomonas noxia ATCC 43541]
gi|292647583|gb|EFF65555.1| GTP-binding protein EngA [Selenomonas noxia ATCC 43541]
Length = 428
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/302 (44%), Positives = 180/302 (59%), Gaps = 41/302 (13%)
Query: 174 VGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIME 233
+GKS LFN++ +IV D PGVTRDR+Y + W HEF+++DTGG
Sbjct: 1 MGKSTLFNQIGKKRISIVDDMPGVTRDRIYMDAEWLNHEFIMIDTGG------------- 47
Query: 234 DLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEI 293
I + + M S QA AIEE+ VI+FLVDG+AGLT++DEE+
Sbjct: 48 ------------IEFDESDHILRSMRS----QAELAIEEADVILFLVDGRAGLTSSDEEV 91
Query: 294 ADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLVC 352
A LR+ K +ILAVNK +S + + + +F++LG P+PISA + G+LLD+V
Sbjct: 92 ARILRRT--QKPVILAVNKIDSFDREAL-IYDFYALGLGDPIPISASNAMNLGDLLDMVA 148
Query: 353 SELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDT 412
+ + D E + I AIA+VGRPNVGKSS++N L+GEDR IVS + GTTRDAIDT
Sbjct: 149 AAFPR---ATDADAESDEI-AIAVVGRPNVGKSSLVNRLLGEDRVIVSDVPGTTRDAIDT 204
Query: 413 EFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACIT 472
FT +G K+ LIDTAG+R++ I E SV R+ RAI R+ VV +VI A I
Sbjct: 205 HFT-RDGVKYLLIDTAGMRRKGKITLP---VERYSVMRSLRAIDRAGVVLMVINAAEGIL 260
Query: 473 EQ 474
EQ
Sbjct: 261 EQ 262
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 39/196 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS+L NRL+G +R IV D PG TRD + +++L+DT G+
Sbjct: 166 IAVVGRPNVGKSSLVNRLLGEDRVIVSDVPGTTRDAIDTHFTRDGVKYLLIDTAGMRRKG 225
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K I L +V R + AI+ + V++ +++ G
Sbjct: 226 K-------------------ITLPVERYSVMR--------SLRAIDRAGVVLMVINAAEG 258
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKC----ESPRKGIMQVSE-----FWSLGFSP-LP 335
+ D +IA ++ ++ K +I+ VNK + K ++ ++ F L ++P L
Sbjct: 259 ILEQDTKIAGYVHES--GKGVIIVVNKWDIFPDKNDKSTLRFTDELRDKFGFLQYAPILY 316
Query: 336 ISAISGTGTGELLDLV 351
SA++G + +LV
Sbjct: 317 TSALTGQRIERVTELV 332
>gi|295110181|emb|CBL24134.1| ribosome-associated GTPase EngA [Ruminococcus obeum A2-162]
Length = 441
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 187/312 (59%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGEMISIVKDTPGVTRDRIYADVTWLDKSFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ D+ + S + QA AI+ + VI+F+ D Q
Sbjct: 62 ----EPD-SGDIIL----------------------SQMREQAQIAIDTADVIVFITDVQ 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR++ K ++L VNK +S +K +M V EF++LG P+ ISA + T
Sbjct: 95 QGLVDSDAKVADMLRRS--QKPVVLVVNKVDSVQKYMMDVYEFYNLGIGEPIAISAANRT 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD + E + T+ E++ IP IA+VG+PNVGKSS++N L+GEDR IVS I
Sbjct: 153 GIGDMLDEIVKEFPEDADTD----EDDDIPKIAVVGKPNVGKSSLINKLLGEDRVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+D + + +++ IDTAG+R++ I E SV R A+ R+DVV
Sbjct: 209 AGTTRDAVDAKVKWKD-REYIFIDTAGLRRKGKIKEE---LERYSVIRTVTAVERADVVV 264
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 265 VVIDATEGVTEQ 276
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 29/156 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P++A+VG+PNVGKS+L N+L+G +R IV D G TRD + + W + E++ +DT G+
Sbjct: 177 IPKIAVVGKPNVGKSSLINKLLGEDRVIVSDIAGTTRDAVDAKVKWKDREYIFIDTAGL- 235
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + I E+L + I + A+E + V++ ++D
Sbjct: 236 ---RRKGKIKEELERYSVI-----------------------RTVTAVERADVVVVVIDA 269
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D +IA + K +++AVNK ++ K
Sbjct: 270 TEGVTEQDAKIAGIAHER--GKGVVIAVNKWDAVEK 303
>gi|261367335|ref|ZP_05980218.1| ribosome-associated GTPase EngA [Subdoligranulum variabile DSM
15176]
gi|282570094|gb|EFB75629.1| ribosome biogenesis GTPase Der [Subdoligranulum variabile DSM
15176]
Length = 447
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/312 (41%), Positives = 182/312 (58%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FN+L G AIV D PGVTRDR++ W ++F+LVDTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNKLTGQRLAIVEDTPGVTRDRIFCDCEWCGNKFLLVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P I + L +A M QA AI+ + II + +
Sbjct: 62 ----EPRIDDGL-------------------LAHM----REQAQIAIDSADCIIMVTELT 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGT 342
G+T D++IA L ++ K ++LAVNKC+ + M++ +F+SLG +P+S + G
Sbjct: 95 NGVTPQDQDIAGMLMRS--GKPVVLAVNKCDKIGEPPMELYDFYSLGLGEIIPVSGVHGH 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD VC+ L ED ++RI +A++GRPNVGKSS++N ++GE+R IV+
Sbjct: 153 GTGDLLDAVCAHLDFTRDDED---GDDRI-TVAVIGRPNVGKSSLINHILGENRLIVANE 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAIDT G KF DTAG+RK+ + S E SV R+ A+ RS V
Sbjct: 209 AGTTRDAIDTLVENKYG-KFVFTDTAGLRKKGKVESG---VERYSVLRSLAAVERSRVCV 264
Query: 463 LVIEAMACITEQ 474
++I+A TEQ
Sbjct: 265 IMIDATVGFTEQ 276
>gi|339445293|ref|YP_004711297.1| putative GTPase [Eggerthella sp. YY7918]
gi|338905045|dbj|BAK44896.1| predicted GTPase [Eggerthella sp. YY7918]
Length = 438
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/315 (41%), Positives = 179/315 (56%), Gaps = 43/315 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS NR+ + AIV + GVTRDR Y + W EF L+DTGG+
Sbjct: 3 LPIVAVVGRPNVGKSTFVNRIAQADEAIVHEMRGVTRDRSYHNADWNGVEFKLIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D A S I QA A E+ VI+F+VDG
Sbjct: 62 -------EMGDDDA---------------------FQSSIRTQALAGANEADVIVFIVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+ A DEE+A LRK K + L VNK ++P + ++ EF+ LG P P+S++ G
Sbjct: 94 KTGVNADDEEVARILRKTA--KPVFLVVNKLDTPNR-TDELWEFYQLGLGDPWPVSSLHG 150
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAI--AIVGRPNVGKSSILNALVGEDRTIV 399
GTG+LLD V EL+ VE D +E P I AI+GRPN GKSS+ N + DR+IV
Sbjct: 151 HGTGDLLDAVVEELRMVELPSDADDE----PGINVAIIGRPNAGKSSLTNKMTNNDRSIV 206
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S ++GTTRDAIDT +G ++ ++DTAG+R+++ I E RA RAI R+D
Sbjct: 207 SDVAGTTRDAIDTTVE-HDGVRYTIVDTAGLRRKSQIDQD---VEYYGFVRAMRAIDRAD 262
Query: 460 VVALVIEAMACITEQ 474
V LVI++ +T+Q
Sbjct: 263 VALLVIDSTLGLTDQ 277
>gi|346310348|ref|ZP_08852365.1| ribosome-associated GTPase EngA [Collinsella tanakaei YIT 12063]
gi|345898023|gb|EGX67913.1| ribosome-associated GTPase EngA [Collinsella tanakaei YIT 12063]
Length = 445
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/315 (41%), Positives = 181/315 (57%), Gaps = 42/315 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS L NR+ AIV GVTRDR Y + W F LVDTGG+
Sbjct: 3 PIVAIVGRPNVGKSTLVNRIAQTADAIVHQSRGVTRDRSYHEADWNGRSFTLVDTGGI-- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + I QA AA EE+ VI+F+VDG
Sbjct: 61 ----EPLKSEDV----------------------FSASIRDQALAACEEAAVILFVVDGT 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T DE +A L++ + + L VNK ++P + + EF+SLG P+ ISA+ G
Sbjct: 95 TGVTEEDESVARMLKR--VKAPVFLLVNKLDNPDREGDNLWEFYSLGVGEPIAISALHGH 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIP---AIAIVGRPNVGKSSILNALVGEDRTIV 399
GTG+LLD V + + ED + E P ++AI+GRPN GKSS+ N ++G DR+IV
Sbjct: 153 GTGDLLDEVVALFPE----EDDLTAEPSDPNSLSVAIIGRPNAGKSSLFNKIIGSDRSIV 208
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S I+GTTRDAIDT +G+++ ++DTAGIRK++ + + E S+ R RAI R+D
Sbjct: 209 SDIAGTTRDAIDT-IVERDGRRYCMVDTAGIRKKSTVYEN---IEYYSMVRGLRAIDRAD 264
Query: 460 VVALVIEAMACITEQ 474
V LV+++ +TEQ
Sbjct: 265 VALLVVDSTTGMTEQ 279
>gi|78186288|ref|YP_374331.1| GTP-binding protein EngA [Chlorobium luteolum DSM 273]
gi|123583448|sp|Q3B5U3.1|DER_PELLD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|78166190|gb|ABB23288.1| Small GTP-binding protein domain [Chlorobium luteolum DSM 273]
Length = 436
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 182/312 (58%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +A+VGRPNVGKS LFNR++ AIV PGVTRDR W EF L+DTGG
Sbjct: 3 PLIALVGRPNVGKSTLFNRILREKAAIVDPTPGVTRDRHIAEGHWQGREFRLMDTGGYAP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
ED I+T +M+E Q AI+++ +IIFL D +
Sbjct: 63 ---------EDGVIST--------------------AMLE-QTMMAIQDADIIIFLADVR 92
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+G++ D E+A L++++ DK I LAVNK ESP+ I + + F S GF+ P ISA G+
Sbjct: 93 SGVSYDDLELAKILKRDFSDKPIFLAVNKAESPQLAI-EAASFVSTGFTEPWAISARDGS 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G +LLD + + +G EE+ +A++GRPNVGKSS +NAL+G +R IVS I
Sbjct: 152 GVADLLDEILLTFPESDGP----PEEDGAIRLAVIGRPNVGKSSFVNALLGSNRQIVSSI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT FT + Q+F LIDTAG+RKR I++ E S R+ RAI R +V
Sbjct: 208 PGTTRDAIDTRFTRKQ-QEFMLIDTAGLRKRTKISAG---IEYYSSLRSERAIERCEVAI 263
Query: 463 LVIEAMACITEQ 474
++++A I +Q
Sbjct: 264 VMLDATPGIEKQ 275
>gi|332291461|ref|YP_004430070.1| ribosome-associated GTPase EngA [Krokinobacter sp. 4H-3-7-5]
gi|332169547|gb|AEE18802.1| ribosome-associated GTPase EngA [Krokinobacter sp. 4H-3-7-5]
Length = 435
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/303 (42%), Positives = 181/303 (59%), Gaps = 41/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRLV AIV GVTRDR YG++ W EF ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLVQRREAIVDAVSGVTRDRHYGKTDWNGREFTVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G + + + I++Q AI+E+ IIF+VD + G
Sbjct: 62 ---------------VGSDDV-----------FEAEIDKQVELAIDEADAIIFMVDVEHG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T DEE+A LR++ K I LAVNK ++ ++ V EF++LG I+A +G+GT
Sbjct: 96 VTGMDEEVAKLLRRS--KKPIFLAVNKVDNNKRAADAV-EFYNLGLGDYYTIAATNGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V L + EE++ +P A+VGRPN GKSS +NAL+GEDR IV+ I+G
Sbjct: 153 GDLLDAVVEALPEQVEE----EEKDELPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDA+DT++ G +F L+DTAGIR++A + E SV R+ RAI +DV+ LV
Sbjct: 209 TTRDAMDTKYN-RFGFEFNLVDTAGIRRKAKVKED---LEFYSVMRSVRAIEHADVILLV 264
Query: 465 IEA 467
++A
Sbjct: 265 VDA 267
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 71/167 (42%), Gaps = 43/167 (25%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G +R IV D G TRD M + EF LVDT G+
Sbjct: 175 LPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDAMDTKYNRFGFEFNLVDTAGI- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ AIE + VI+ +VD
Sbjct: 234 ---RRKAKVKEDLEFYSVM-----------------------RSVRAIEHADVILLVVDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL 329
G + I WL E RKGI+ + W L
Sbjct: 268 TRGFDGQVQNIF-WL---------------AERNRKGIVILVNKWDL 298
>gi|300726752|ref|ZP_07060182.1| ribosome-associated GTPase EngA [Prevotella bryantii B14]
gi|299775865|gb|EFI72445.1| ribosome-associated GTPase EngA [Prevotella bryantii B14]
Length = 437
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 178/310 (57%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNR RAIV D G TRDR YG+ W +F +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRFTQSRRAIVSDTAGTTRDRQYGKVSWNGKDFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I RQ A EE+ +++FLVD + G
Sbjct: 63 KSD-DIFED--------------------------AIRRQVLVATEEADLVLFLVDTETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D ++A LR+ + IIL NK ++ + + +EF+ LG P+ ISA +G GT
Sbjct: 96 VTDWDVDVAKILRRAKLP--IILVANKVDNSGE-YYEAAEFYKLGLGDPVCISAATGGGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD++ ++ E+ +EE+ IP A+VGRPN GKSSI+NA +GEDR IV+ I+G
Sbjct: 153 GDLLDMILEKMP--NSPEETIEED--IPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+I T++ G F L+DTAGIR++ + E SV R+ RAI SDV L+
Sbjct: 209 TTRDSIYTKY-DKFGFDFYLVDTAGIRRKNKVTED---LEFYSVMRSIRAIENSDVCILM 264
Query: 465 IEAMACITEQ 474
++A I Q
Sbjct: 265 LDATRGIEAQ 274
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 29/155 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y + +F LVDT
Sbjct: 172 EEDIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTKYDKFGFDFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIE S V I +
Sbjct: 232 GI----RRKNKVTEDLEFYSVM-----------------------RSIRAIENSDVCILM 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+D G+ A D I +++N +K +++ VNK +
Sbjct: 265 LDATRGIEAQDMNIFQLIQRN--NKSLVVVVNKWD 297
>gi|383810865|ref|ZP_09966349.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 306 str.
F0472]
gi|383356504|gb|EID34004.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 306 str.
F0472]
Length = 437
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 180/310 (58%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRHAIVSDTAGTTRDRQYGKCQWNGREFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS ++ ED I +Q A EE+ +++FLVD + G
Sbjct: 63 KSD-DVFED--------------------------AIRKQVLVATEEADLVLFLVDTETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + ++L NK ++ + Q +EF+ LG P+ ISA +G GT
Sbjct: 96 VTDWDEDVAMILRRTKLP--VLLVANKVDNSGE-YYQAAEFYKLGLGDPICISAATGGGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD + +LK + ++ ++++ IP A+VGRPN GKSSI+NA +GEDR IV+ I+G
Sbjct: 153 GDLLDTLLEKLK--DAPDETIDQD--IPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+I T +T G F L+DTAGIR++ + E SV R+ R+I +DV L+
Sbjct: 209 TTRDSIYTRYT-KFGFDFYLVDTAGIRRKNKVTED---LEFYSVMRSIRSIENADVCILM 264
Query: 465 IEAMACITEQ 474
++A I Q
Sbjct: 265 LDATRGIESQ 274
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 29/150 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT G+
Sbjct: 175 IPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYTKFGFDFYLVDTAGI- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ +IE + V I ++D
Sbjct: 234 ---RRKNKVTEDLEFYSVM-----------------------RSIRSIENADVCILMLDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNK 312
G+ + D I +++N +K +++ VNK
Sbjct: 268 TRGIESQDMNIFQLIQRN--NKSLVVVVNK 295
>gi|223985795|ref|ZP_03635838.1| hypothetical protein HOLDEFILI_03144 [Holdemania filiformis DSM
12042]
gi|223962243|gb|EEF66712.1| hypothetical protein HOLDEFILI_03144 [Holdemania filiformis DSM
12042]
Length = 434
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/311 (41%), Positives = 181/311 (58%), Gaps = 46/311 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNR++G +IV D PGVTRDR+YG+ W +F L+DTGG
Sbjct: 6 VAIVGRPNVGKSTIFNRILGERVSIVEDTPGVTRDRIYGKGTWLTQDFRLIDTGG----- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
I +E P I+ Q AIEE+ VI+F+V+G+ G
Sbjct: 61 ---------------IQLENQPFQEE----------IKAQVEIAIEEADVILFVVNGRDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKC-ESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
+T DE IA LR++ K ++LAVNK ++ +G + EF++LG S P+ +S G G
Sbjct: 96 VTGDDEFIARMLRRS--GKPVVLAVNKIDDATLQG--NIYEFYALGLSEPIAVSGSHGIG 151
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
G+++D + + + + E AI+GRPNVGKSS++NAL+ E+R IVS I
Sbjct: 152 IGDVMDALVGAFPEKQ------QPELEGIRFAIIGRPNVGKSSLVNALLKEERVIVSDIE 205
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRDA+DT F +G+++ ++DTAGIRKR + + E SV RA AI R DVV
Sbjct: 206 GTTRDAVDTPFE-HDGKQYVVVDTAGIRKRGKVYEN---IEKYSVLRAMSAIERCDVVLF 261
Query: 464 VIEAMACITEQ 474
VI+ + I EQ
Sbjct: 262 VIDGESGIREQ 272
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 43/211 (20%)
Query: 155 IGNVPEHLLP-----RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG 209
+G PE P R AI+GRPNVGKS+L N L+ R IV D G TRD +
Sbjct: 160 VGAFPEKQQPELEGIRFAIIGRPNVGKSSLVNALLKEERVIVSDIEGTTRDAVDTPFEHD 219
Query: 210 EHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAA 269
++++VDT G+ K NI + +V R A +A
Sbjct: 220 GKQYVVVDTAGIRKRGKVYENI-------------------EKYSVLR--------AMSA 252
Query: 270 IEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE- 325
IE V++F++DG++G+ D+ +A + + K II+ NK E K + +V+E
Sbjct: 253 IERCDVVLFVIDGESGIREQDKHVAGYAHE--AGKPIIIVYNKWDAVEKDEKTMNRVTEQ 310
Query: 326 ----FWSLGFSP-LPISAISGTGTGELLDLV 351
F L ++P L +SA + LL ++
Sbjct: 311 IRAQFVYLSYAPVLFVSAKTHQRVNTLLPMI 341
>gi|345885001|ref|ZP_08836395.1| GTP-binding protein engA [Prevotella sp. C561]
gi|345042150|gb|EGW46257.1| GTP-binding protein engA [Prevotella sp. C561]
Length = 437
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 180/310 (58%), Gaps = 41/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRHAIVSDTAGTTRDRQYGKCQWNGREFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I +Q A EE+ +++F+VD + G
Sbjct: 63 KSD-DIFED--------------------------AIRKQVLVATEEADLVLFVVDTETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + ++L NK ++ + Q +EF+ LG P+ ISA +G GT
Sbjct: 96 ITDWDEDVALILRRTKLP--VLLVANKVDNSGE-YYQAAEFYKLGLGDPICISAATGGGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD + LK + +++V+++ IP A+VGRPN GKSS++NA +GEDR IV+ I+G
Sbjct: 153 GDLLDTLLENLK--DAPDEIVDQD--IPRFAVVGRPNAGKSSLINAFIGEDRNIVTEIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+I T +T G F L+DTAGIR++ + E SV R+ R+I +DV L+
Sbjct: 209 TTRDSIYTRYT-KFGFDFYLVDTAGIRRKNKVTED---LEFYSVMRSIRSIENADVCILM 264
Query: 465 IEAMACITEQ 474
++A I Q
Sbjct: 265 LDATRGIESQ 274
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 29/150 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+PR A+VGRPN GKS+L N +G +R IV + G TRD +Y R +F LVDT G+
Sbjct: 175 IPRFAVVGRPNAGKSSLINAFIGEDRNIVTEIAGTTRDSIYTRYTKFGFDFYLVDTAGI- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ +IE + V I ++D
Sbjct: 234 ---RRKNKVTEDLEFYSVM-----------------------RSIRSIENADVCILMLDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNK 312
G+ + D I +++N +K +++ VNK
Sbjct: 268 TRGIESQDMNIFQLIQRN--NKSLVVVVNK 295
>gi|77164340|ref|YP_342865.1| small GTP-binding protein domain-containing protein [Nitrosococcus
oceani ATCC 19707]
gi|254434862|ref|ZP_05048370.1| GTPase, putative [Nitrosococcus oceani AFC27]
gi|123757906|sp|Q3JCW1.1|DER_NITOC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|76882654|gb|ABA57335.1| Small GTP-binding domain protein [Nitrosococcus oceani ATCC 19707]
gi|207091195|gb|EDZ68466.1| GTPase, putative [Nitrosococcus oceani AFC27]
Length = 464
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/310 (42%), Positives = 181/310 (58%), Gaps = 40/310 (12%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS LFNRL A+VVD+PGVTRDR YG + +GE F +VDTGGV+
Sbjct: 5 VALVGRPNVGKSTLFNRLTRSRDALVVDQPGVTRDRKYGLAHYGEQSFFVVDTGGVME-- 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+E+ + R ++ QA AIEE+ VI FLVDG+ G
Sbjct: 63 -------------------------QESGIGR---LMRAQAQLAIEEADVIFFLVDGREG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
L++ DEEIA WLR K + L +NK E R G + SEF+ LG P+ ISA G G
Sbjct: 95 LSSLDEEIAAWLR--CAQKPLKLVINKAEG-RDGDLVASEFYRLGLGEPIIISAQQGQGV 151
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G LL+ + + L +E E ++ + A++GRPNVGKS+++N ++GE+R + S I G
Sbjct: 152 GRLLEALLTLLPVLEREESEIQAKG--LQFAVIGRPNVGKSTLVNRILGEERVLSSEIPG 209
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+I F G+ + L+DTAGIR+R+ I E SV ++ ++I + VV LV
Sbjct: 210 TTRDSISIPFR-HHGKDYTLVDTAGIRRRSRILDK---VEKFSVIQSLQSIAIAQVVILV 265
Query: 465 IEAMACITEQ 474
I+A + EQ
Sbjct: 266 IDAHDSVVEQ 275
>gi|218282475|ref|ZP_03488734.1| hypothetical protein EUBIFOR_01316 [Eubacterium biforme DSM 3989]
gi|218216571|gb|EEC90109.1| hypothetical protein EUBIFOR_01316 [Eubacterium biforme DSM 3989]
Length = 435
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 131/310 (42%), Positives = 177/310 (57%), Gaps = 43/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNRL+G ++IV D PGVTRDR+YG W F L+DTGG+
Sbjct: 6 VAIVGRPNVGKSTIFNRLIGQRKSIVDDTPGVTRDRIYGEVEWLTQTFRLIDTGGIQ--- 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ED A I M Q AIEE+ VIIFL + G
Sbjct: 63 ------IEDQAFAQEINM---------------------QVDIAIEEADVIIFLTSAKEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+ D IA L+K K +ILA NK ++P M V EF++LG P+ +S G G
Sbjct: 96 VMTDDTVIARKLQK--CKKPVILACNKVDNPEMQ-MNVYEFYALGLGDPVVLSGAHGIGL 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD+V +L + ++L E I + ++GRPNVGKSS++N+++ EDR IVS + G
Sbjct: 153 GDLLDIVLEKLPE----KNLSPYEG-ITSFCVIGRPNVGKSSLVNSILKEDRVIVSNVEG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT F + +++ +IDTAGIRK+ I + E S+ RA AI RS+VV +
Sbjct: 208 TTRDAIDTPFH-VDDKEYMIIDTAGIRKKGKIYEN---IEKYSILRALSAIDRSNVVLFL 263
Query: 465 IEAMACITEQ 474
I+ I +Q
Sbjct: 264 IDGEKGIRDQ 273
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 38/202 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P + ++GRPNVGKS+L N ++ +R IV + G TRD + + E+M++DT
Sbjct: 170 PYEGITSFCVIGRPNVGKSSLVNSILKEDRVIVSNVEGTTRDAIDTPFHVDDKEYMIIDT 229
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ K NI E +I +A +AI+ S V++F
Sbjct: 230 AGIRKKGKIYENI-EKYSIL--------------------------RALSAIDRSNVVLF 262
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQV-----SEFWSLG 330
L+DG+ G+ D+ +A K +I+ NK E K + ++ ++F L
Sbjct: 263 LIDGEKGIRDQDKHVAGLAHD--AGKGVIIVYNKWDTVEKDEKTMAKIEKEIRAQFLYLN 320
Query: 331 FSPLPI-SAISGTGTGELLDLV 351
++P+ SA++G+ +L+ L+
Sbjct: 321 YAPIAFTSALTGSKVNQLIPLI 342
>gi|153812950|ref|ZP_01965618.1| hypothetical protein RUMOBE_03357 [Ruminococcus obeum ATCC 29174]
gi|149830897|gb|EDM85987.1| ribosome biogenesis GTPase Der [Ruminococcus obeum ATCC 29174]
Length = 441
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 131/312 (41%), Positives = 186/312 (59%), Gaps = 40/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGEMISIVKDTPGVTRDRIYADVTWLDKSFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ D+ + S + QA AI+ + VI+F+ D Q
Sbjct: 62 ----EPD-SGDIIL----------------------SQMREQAQIAIDTADVIVFITDVQ 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR++ K ++L VNK +S +K +M V EF++LG P+ ISA + T
Sbjct: 95 QGLVDSDAKVADMLRRS--QKPVVLVVNKVDSVQKYMMDVYEFYNLGIGEPVAISAANRT 152
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G++LD + E + E E++ IP +A+VG+PNVGKSS++N L+GEDR IVS I
Sbjct: 153 GIGDMLDEIIKEFPEDLDAE----EDDDIPKVAVVGKPNVGKSSLINKLLGEDRVIVSDI 208
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDA+D + + +++ IDTAG+R++ I E SV R A+ R+DVV
Sbjct: 209 AGTTRDAVDAKVKWKD-REYIFIDTAGLRRKGKIKEE---IERYSVIRTVTAVERADVVV 264
Query: 463 LVIEAMACITEQ 474
+VI+A +TEQ
Sbjct: 265 VVIDATEGVTEQ 276
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 29/156 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P+VA+VG+PNVGKS+L N+L+G +R IV D G TRD + + W + E++ +DT G+
Sbjct: 177 IPKVAVVGKPNVGKSSLINKLLGEDRVIVSDIAGTTRDAVDAKVKWKDREYIFIDTAGLR 236
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K + I E ++ T+ A+E + V++ ++D
Sbjct: 237 RKGKIKEEI-ERYSVIRTV--------------------------TAVERADVVVVVIDA 269
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D +IA + K +I+AVNK ++ K
Sbjct: 270 TEGVTEQDAKIAGIAHER--GKGVIIAVNKWDAVEK 303
>gi|225181110|ref|ZP_03734557.1| small GTP-binding protein [Dethiobacter alkaliphilus AHT 1]
gi|225168307|gb|EEG77111.1| small GTP-binding protein [Dethiobacter alkaliphilus AHT 1]
Length = 440
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 136/314 (43%), Positives = 178/314 (56%), Gaps = 48/314 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEP--GVTRDRMYGRSFWGEHEFMLVDTGGV 221
P VAIVGRPNVGKS LFNRL+ R + ++EP GVTRDR+YGR+ W HEF L+DTGG
Sbjct: 4 PVVAIVGRPNVGKSTLFNRLI--QRRLAIEEPTAGVTRDRIYGRADWTGHEFWLIDTGG- 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
L E ++R I RQ A+EE+ VIIF+VD
Sbjct: 61 --------------------------LTFEEDKISR---EIHRQVKLAMEEANVIIFVVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
++G D E+A LRK K +ILA NK ESP +SEF++LG P S
Sbjct: 92 VRSGPVTLDYEVAAMLRKT--TKPVILAANKAESPN---FDMSEFYALGLGEPTLTSGAH 146
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG+LLD V L + E E+ I +AI+GRPNVGKSS+ N L G +R IVS
Sbjct: 147 GLGTGDLLDEVAKHLPETEEF----PEDEEILRVAIIGRPNVGKSSLTNKLSGTERVIVS 202
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
+ GTTRDAID + +K+ +DTAGIR+++ + + E SV R+ RA +DV
Sbjct: 203 DMPGTTRDAIDL-LIERDNRKYLFVDTAGIRRKSKVDEA---VEYYSVLRSIRAAESADV 258
Query: 461 VALVIEAMACITEQ 474
V ++I+A +TEQ
Sbjct: 259 VLMLIDAAEGVTEQ 272
>gi|331703406|ref|YP_004400093.1| GTP binding protein EngA [Mycoplasma mycoides subsp. capri LC str.
95010]
gi|328801961|emb|CBW54115.1| GTP binding protein EngA, probably truncated inC terminal
[Mycoplasma mycoides subsp. capri LC str. 95010]
Length = 435
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/311 (42%), Positives = 186/311 (59%), Gaps = 45/311 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVG+PNVGKS+LFNR++ ++IV D+PGVTRDR+Y + W EF+L+DTGG+
Sbjct: 6 VAIVGKPNVGKSSLFNRIIKEKKSIVDDKPGVTRDRIYSSAEWLTREFILIDTGGIS--- 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ D + I + Q AIE++ VIIF+VD
Sbjct: 63 ------LSDQLFSNEIKL---------------------QTQIAIEQADVIIFVVDFLNN 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI-MQVSEFWSLGFSPLP-ISAISGTG 343
L D+ IA L K+ K +ILAVNK + +K I +F SLGFS L IS+ G G
Sbjct: 96 LDNDDKMIAKILHKS--KKPVILAVNKYD--KKTIDDHNYQFMSLGFSDLYFISSTHGIG 151
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
G+LLD V S + K E+++++++ IAI+GRPNVGKSS++N+LV E+R IVS I
Sbjct: 152 IGDLLDKVISYISK---NEEIIKDDS--TKIAIIGRPNVGKSSLVNSLVNENRMIVSEIE 206
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTT DA+D F+ + +K+ +IDTAGIRK++ + G T E S R+ AI +D+V L
Sbjct: 207 GTTLDAVDISFSYNK-KKYTVIDTAGIRKKSKL---GQTIEKYSYLRSLSAISDADIVLL 262
Query: 464 VIEAMACITEQ 474
+I+A IT+Q
Sbjct: 263 MIDATKPITDQ 273
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N LV NR IV + G T D + + + ++ ++DT G+
Sbjct: 176 KIAIIGRPNVGKSSLVNSLVNENRMIVSEIEGTTLDAVDISFSYNKKKYTVIDTAGIRKK 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK L + + S+ +AI ++ +++ ++D
Sbjct: 236 SK---------------------LGQTIEKYSYLRSL------SAISDADIVLLMIDATK 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE-----FWSLGFSPLP- 335
+T D I + K +I+ VNK ++ I++ E F + ++ +
Sbjct: 269 PITDQDTNIGGLIYDE--KKPVIIVVNKWDLIKNKETEILKKEEEIRAYFKYISYAKIIF 326
Query: 336 ISAISGTGTGELLDLV 351
ISA+ T ++LDLV
Sbjct: 327 ISALDKTRITKILDLV 342
>gi|302878616|ref|YP_003847180.1| ribosome-associated GTPase EngA [Gallionella capsiferriformans
ES-2]
gi|302581405|gb|ADL55416.1| ribosome-associated GTPase EngA [Gallionella capsiferriformans
ES-2]
Length = 470
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/318 (40%), Positives = 185/318 (58%), Gaps = 46/318 (14%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP + +VGRPNVGKS LFNRL A+V D+PG+TRDR YGR GE +++VDTGG+
Sbjct: 1 MLPTLVLVGRPNVGKSTLFNRLTRSRDALVADQPGLTRDRHYGRGRVGERPYLVVDTGGL 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K IM ++A RQ+ A++E+ V++FLVD
Sbjct: 61 EPVAKD--GIMFEMA---------------------------RQSRQAVDEADVVLFLVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+AG T D IA LRK K I+L VNK E + + +EF+ LG P PIS+
Sbjct: 92 GRAGCTPQDLIIATQLRKT--GKPILLLVNKAEGMARARV-TAEFFELGLGEPYPISSAH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEE----ENRIPAIAIVGRPNVGKSSILNALVGEDR 396
G E++++ E++VEE E++ P +AIVGRPNVGKS+++NA++GE R
Sbjct: 149 GDNVVEVIEIALENF-----PEEIVEEDAVVEDKPPKLAIVGRPNVGKSTLVNAILGEQR 203
Query: 397 TIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIR 456
I GTTRD+I +F +G+++ +IDTAG+R+R + + E SV + +AI
Sbjct: 204 VIAFDQPGTTRDSIYIDFE-RDGKQYTIIDTAGVRRRGKVEEA---IEKFSVIKTMQAIE 259
Query: 457 RSDVVALVIEAMACITEQ 474
++VV LV++A ITEQ
Sbjct: 260 DANVVVLVVDARDQITEQ 277
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 36/192 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P++AIVGRPNVGKS L N ++G R I D+PG TRD +Y ++ ++DT GV
Sbjct: 179 PKLAIVGRPNVGKSTLVNAILGEQRVIAFDQPGTTRDSIYIDFERDGKQYTIIDTAGVRR 238
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K + I E ++ T+ AIE++ V++ +VD +
Sbjct: 239 RGKVEEAI-EKFSVIKTM--------------------------QAIEDANVVVLVVDAR 271
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVS---EFWSLGFSPLP-I 336
+T D +AD++ + + ++LAVNK ++ ++ +++ + LGF+ I
Sbjct: 272 DQITEQDAHVADFVLQ--AGRALVLAVNKWDGLDNHQREMVKSDIERKLHFLGFAKRHYI 329
Query: 337 SAISGTGTGELL 348
SA++G G +L
Sbjct: 330 SALNGNGISNVL 341
>gi|227498500|ref|ZP_03928646.1| small GTP-binding protein [Acidaminococcus sp. D21]
gi|226903958|gb|EEH89876.1| small GTP-binding protein [Acidaminococcus sp. D21]
Length = 403
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/312 (40%), Positives = 182/312 (58%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN +IV D PGVTRDR+Y + W + FM+VDTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNIFADSRISIVEDTPGVTRDRLYAEAEWLDRRFMMVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
++A T +I + I QA AI+E+ VI+F+ D +
Sbjct: 62 ----------EIANTDSIAVS-----------------IREQAKIAIKEADVILFVCDAR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T D+E+A +R K ++LAVNK ++P + ++ EF++LG P ISA +
Sbjct: 95 TGVTTEDQEVAKLIR--MAQKPVVLAVNKADTPTQE-LEAYEFYNLGIGEPYMISASNRL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V S + ++ ++ + + +AI+GRPNVGKSSI N ++G+ R+IVS +
Sbjct: 152 NLGDLLDAVVSHFPDEDESD--DDDHDDVIKVAIIGRPNVGKSSIFNDIIGQTRSIVSDV 209
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAID +GQ + IDTAG+R++ I E S+ R RA+ RSDVV
Sbjct: 210 AGTTRDAIDVPVM-KDGQTYLFIDTAGMRRKGKI---DEPIEKYSIIRTLRAVDRSDVVL 265
Query: 463 LVIEAMACITEQ 474
+V++A+ +TEQ
Sbjct: 266 MVLDAVDGVTEQ 277
>gi|405983423|ref|ZP_11041729.1| ribosome-associated GTPase EngA [Slackia piriformis YIT 12062]
gi|404389029|gb|EJZ84110.1| ribosome-associated GTPase EngA [Slackia piriformis YIT 12062]
Length = 437
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 134/315 (42%), Positives = 179/315 (56%), Gaps = 44/315 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS NR+ G AIV + GVTRDR Y + W F L+DTGG
Sbjct: 3 LPIVAVVGRPNVGKSTFVNRIAGAQDAIVHEMRGVTRDRSYHEADWNGVHFTLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + +A I QA A EE+ I+FLVDG
Sbjct: 61 -----------------------IEMGNEDA----FQKSIRDQAIMATEEADAIVFLVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSEFWSLGFS-PLPISAI 339
+ G + D E+A L+++ K ++LAVNK ++P K GI EF+SLG P PIS++
Sbjct: 94 KTGSSPDDLEVARILKRS--GKPVMLAVNKMDAPGKEDGIW---EFYSLGLGDPWPISSV 148
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIV 399
G GTG+LLD + S +K +E E+ + +AI+GRPN GKSS+ N L+G DRTIV
Sbjct: 149 HGHGTGDLLDEIVSHIKDIEVEEEEEVDS---INVAIIGRPNAGKSSLTNRLIGRDRTIV 205
Query: 400 SPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSD 459
S ++GTTRDA+DT +G+ + ++DTAG+RKR I E S RA RAI R+D
Sbjct: 206 SDVAGTTRDAVDT-VVEHDGKLYTIVDTAGLRKRTKIDED---VEYYSFVRAMRAIDRAD 261
Query: 460 VVALVIEAMACITEQ 474
V LVI+A +T+Q
Sbjct: 262 VAILVIDATLGLTDQ 276
>gi|352684547|ref|YP_004896532.1| small GTP-binding protein [Acidaminococcus intestini RyC-MR95]
gi|350279202|gb|AEQ22392.1| small GTP-binding protein [Acidaminococcus intestini RyC-MR95]
Length = 448
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/312 (40%), Positives = 182/312 (58%), Gaps = 39/312 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN +IV D PGVTRDR+Y + W + FM+VDTGG+
Sbjct: 10 PIVAIVGRPNVGKSTLFNIFADSRISIVEDTPGVTRDRLYAEAEWLDRRFMMVDTGGI-- 67
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
++A T +I + I QA AI+E+ VI+F+ D +
Sbjct: 68 ----------EIANTDSIAVS-----------------IREQAKIAIKEADVILFVCDAR 100
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T D+E+A +R K ++LAVNK ++P + ++ EF++LG P ISA +
Sbjct: 101 TGVTTEDQEVAKLIR--MAQKPVVLAVNKADTPTQE-LEAYEFYNLGIGEPYMISASNRL 157
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G+LLD V S + ++ ++ + + +AI+GRPNVGKSSI N ++G+ R+IVS +
Sbjct: 158 NLGDLLDAVVSHFPDEDESD--DDDHDDVIKVAIIGRPNVGKSSIFNDIIGQTRSIVSDV 215
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTTRDAID +GQ + IDTAG+R++ I E S+ R RA+ RSDVV
Sbjct: 216 AGTTRDAIDVPVM-KDGQTYLFIDTAGMRRKGKI---DEPIEKYSIIRTLRAVDRSDVVL 271
Query: 463 LVIEAMACITEQ 474
+V++A+ +TEQ
Sbjct: 272 MVLDAVDGVTEQ 283
>gi|387792312|ref|YP_006257377.1| ribosome-associated GTPase EngA [Solitalea canadensis DSM 3403]
gi|379655145|gb|AFD08201.1| ribosome-associated GTPase EngA [Solitalea canadensis DSM 3403]
Length = 434
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 124/310 (40%), Positives = 181/310 (58%), Gaps = 42/310 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL +AIV D GVTRDR YG++ W EF+++DTGG + S
Sbjct: 5 VAIVGRPNVGKSTLFNRLTETRKAIVDDMSGVTRDRHYGKAEWLGREFIVIDTGGYVANS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
ED+ + I Q AIEE+ VIIF+VD G
Sbjct: 65 -------EDV----------------------FETAIREQVMIAIEEASVIIFMVDVTTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T ++++A+ LR++ F++ NK ++ K + + + F+S G + +S+++G+GT
Sbjct: 96 VTDLEDDVANILRRSKKPVFVV--ANKVDNT-KLVHESAVFYSFGLGEVYNLSSMTGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GELLD + ++ + D + + +P AIVGRPNVGKSSI+NA +G DR IV+PI+G
Sbjct: 153 GELLDDIIAKFE-----PDAEDTTSDLPKFAIVGRPNVGKSSIINAFLGHDRNIVTPIAG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+I + G +F LIDTAG+RK+ + + E SV R +A+ +DV L+
Sbjct: 208 TTRDSIHIHYK-QFGHEFMLIDTAGLRKKTKVKEN---IEFYSVMRTIKALEEADVCILM 263
Query: 465 IEAMACITEQ 474
++A A I Q
Sbjct: 264 VDATAGIESQ 273
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 74/150 (49%), Gaps = 29/150 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP+ AIVGRPNVGKS++ N +G +R IV G TRD ++ HEFML+DT G+
Sbjct: 174 LPKFAIVGRPNVGKSSIINAFLGHDRNIVTPIAGTTRDSIHIHYKQFGHEFMLIDTAGLR 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+K + NI E ++ TI A+EE+ V I +VD
Sbjct: 234 KKTKVKENI-EFYSVMRTI--------------------------KALEEADVCILMVDA 266
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNK 312
AG+ + D I KN K I+L +NK
Sbjct: 267 TAGIESQDINIFHLAEKN--RKGIVLLINK 294
>gi|91775967|ref|YP_545723.1| GTP-binding protein EngA [Methylobacillus flagellatus KT]
gi|91709954|gb|ABE49882.1| Small GTP-binding protein domain [Methylobacillus flagellatus KT]
Length = 499
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 126/314 (40%), Positives = 181/314 (57%), Gaps = 39/314 (12%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP + +VGRPNVGKS LFNRL A+V D PG+TRDR YGR G +++VDTGG
Sbjct: 2 MLPTIVLVGRPNVGKSTLFNRLTKTRDALVADLPGLTRDRHYGRGVVGSKPYLVVDTGGF 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S I++++A RQ AI+E+ V+IFLVD
Sbjct: 62 EPLVDS--GILKEMA---------------------------RQTLLAIDEADVVIFLVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IA+ LRK+ + I+LAVNK E ++ I +EF LG PL IS+
Sbjct: 93 GRNGLAPQDKVIAERLRKS--QRPILLAVNKTEGMQRAIAS-AEFHELGLGHPLSISSAH 149
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G +L++L E E+ + N++P +AIVGRPNVGKS+++NAL+GE+R I
Sbjct: 150 GEGVRDLVELALENFP--EPGEEEESQGNQVPKVAIVGRPNVGKSTLVNALLGEERVIAF 207
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
GTTRD+I + G+++ +IDTAG+R+R + + E SV + +AI ++V
Sbjct: 208 DQPGTTRDSIYLDLE-RNGKRYTIIDTAGVRRRGKVFEA---VEKFSVIKTMQAIEEANV 263
Query: 461 VALVIEAMACITEQ 474
LV++A ITEQ
Sbjct: 264 AILVVDAQEGITEQ 277
>gi|443243870|ref|YP_007377095.1| GTPase [Nonlabens dokdonensis DSW-6]
gi|442801269|gb|AGC77074.1| GTPase [Nonlabens dokdonensis DSW-6]
Length = 433
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 178/304 (58%), Gaps = 44/304 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNR++ AI GVTRDR YGRS W EF L+DTGG +
Sbjct: 4 VAIVGRPNVGKSTLFNRMIQRREAITDSVSGVTRDRHYGRSDWNGKEFSLIDTGGYV--- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
IG + + + I++Q AI+E+ I+F+V+ + G
Sbjct: 61 ---------------IGSDDV-----------FETEIDQQVELAIDEADAILFMVNAEEG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T DE++A LRK + K + L VNK ++ ++ EF++LG IS+++G+GT
Sbjct: 95 ITPMDEDVAQLLRK--VTKPVFLVVNKVDNNKRE-QDAYEFYNLGLGEYFSISSMNGSGT 151
Query: 345 GELLDLVCSELKKVEGTEDLVEE-ENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
G+LLD V L D VEE ++ +P A+VGRPN GKSS +NAL+GEDR IV+ I+
Sbjct: 152 GDLLDEVVKVLP------DTVEEKKDDLPRFAVVGRPNAGKSSFINALIGEDRYIVTDIA 205
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRD+IDT++ G +F L+DTAGIR++ + E SV R+ RAI DV L
Sbjct: 206 GTTRDSIDTKY-NRFGFEFNLVDTAGIRRKKKVRED---LEFYSVMRSVRAIEHCDVCIL 261
Query: 464 VIEA 467
+++A
Sbjct: 262 MLDA 265
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 69/167 (41%), Gaps = 43/167 (25%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G +R IV D G TRD + + EF LVDT G+
Sbjct: 173 LPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDSIDTKYNRFGFEFNLVDTAGI- 231
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ AIE V I ++D
Sbjct: 232 ---RRKKKVREDLEFYSVM-----------------------RSVRAIEHCDVCILMLDA 265
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL 329
G + I WL E RKGI+ + W L
Sbjct: 266 TRGFDGQVQNIF-WL---------------AERNRKGIVVLVNKWDL 296
>gi|403746312|ref|ZP_10954845.1| ribosome-associated GTPase EngA [Alicyclobacillus hesperidum
URH17-3-68]
gi|403120643|gb|EJY54997.1| ribosome-associated GTPase EngA [Alicyclobacillus hesperidum
URH17-3-68]
Length = 424
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 175/297 (58%), Gaps = 41/297 (13%)
Query: 179 LFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAIT 238
+FNRL+G +IV D PGVTRDR+Y ++ W F L+DTGG+ + +
Sbjct: 1 MFNRLIGERLSIVEDVPGVTRDRIYAKAEWNGVSFHLIDTGGIEMDEEDE---------- 50
Query: 239 TTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLR 298
M ++I QA AI+E+ IIFLVDG+ GL+ DE +A++LR
Sbjct: 51 -------------------MGNLIRIQAQLAIDEADAIIFLVDGRTGLSVQDEYVAEFLR 91
Query: 299 KNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKK 357
++ K ++L VNK + EF+ LGF P+P+SA GTGTG+LLD V L K
Sbjct: 92 RS--KKPVVLGVNKLDHVSHHAASY-EFYQLGFGDPIPLSAEHGTGTGDLLDAVVDVLPK 148
Query: 358 VEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGP 417
E E + +E R+ A +GRPNVGKSS++N L+GE+R +VS I+GTTRDAIDT
Sbjct: 149 -EEDEPVDDEAIRV---AFIGRPNVGKSSLVNRLLGEERVMVSDIAGTTRDAIDTPLV-H 203
Query: 418 EGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQ 474
+GQKF L+DTAG+R+R + + E SV RA RAI R+DV +V++A I EQ
Sbjct: 204 DGQKFVLVDTAGVRRRGKVYEN---IEKYSVLRALRAIERTDVAFIVLDAERGIAEQ 257
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA +GRPNVGKS+L NRL+G R +V D G TRD + +F+LVDT GV
Sbjct: 160 RVAFIGRPNVGKSSLVNRLLGEERVMVSDIAGTTRDAIDTPLVHDGQKFVLVDTAGVRRR 219
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVAR-MPSMIERQATAAIEESCVIIFLVD 281
K NI + + +E +A R + +R A A++ C I FLV+
Sbjct: 220 GKVYENIEKYSVLRALRAIERTDVAFIVLDAERGIAEQDKRVAGYALDAGCAIAFLVN 277
>gi|416358981|ref|ZP_11682285.1| GTP-binding protein Der, partial [Clostridium botulinum C str.
Stockholm]
gi|338194660|gb|EGO87066.1| GTP-binding protein Der [Clostridium botulinum C str. Stockholm]
Length = 387
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 184/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y ++ W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVDDMPGVTRDRIYAQAEWLNNKFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + + VA+M RQA AIE + V++F+VDG+
Sbjct: 62 ----EPE-------------------SEDVIVAQM----RRQAQMAIEMADVVLFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD E+A LRK +K I+LAVNK + R+ + EF++LG P+ ISA G
Sbjct: 95 QGLADADREVAQMLRK--ANKSIVLAVNKIDR-RQLDDNIYEFYNLGLGDPMAISASQGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + + + EEN IA+VGRPNVGKSS++N ++GE++ IVS I
Sbjct: 152 GLGDLLDEVVDKFPETNEDD----EENEYIRIAMVGRPNVGKSSLINRILGEEKHIVSNI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD++D+ EG KF LIDTAG+R+++ I E S R +I +DV
Sbjct: 208 PGTTRDSVDSYIEREEG-KFALIDTAGLRRKSKIKEQ---VERYSAVRTIASIENADVCI 263
Query: 463 LVIEAMACITEQ 474
L+++A I EQ
Sbjct: 264 LMLDAEQGIAEQ 275
>gi|121604778|ref|YP_982107.1| GTP-binding protein EngA [Polaromonas naphthalenivorans CJ2]
gi|166225835|sp|A1VNF8.1|DER_POLNA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|120593747|gb|ABM37186.1| small GTP-binding protein [Polaromonas naphthalenivorans CJ2]
Length = 445
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 124/312 (39%), Positives = 179/312 (57%), Gaps = 37/312 (11%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +A+VGRPNVGKS LFNRL AIV D G+TRDR YG G HE++++DTGG
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTKTRDAIVADFAGLTRDRHYGNGKLGPHEYIVIDTGGF-- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ AV + + RQ A+ ES V+IF+VD +
Sbjct: 61 ----EPD-----------------------AVTGIYKEMARQTRQAVAESDVVIFVVDAR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGT 342
AG++A D +IA++LRK + K +LA NK E +G QVSEF+ LG L +SA G
Sbjct: 94 AGISAQDYDIANYLRK--LGKPTVLAANKAEGLPEG-TQVSEFFELGLGEMLAVSASHGQ 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G L+DL + L + E+ +E+ + +A+ GRPNVGKS+++N +GE+R + +
Sbjct: 151 GMRMLVDLALAPLNLPDPAEETEQEDPAVIKLAVAGRPNVGKSTLINTWLGEERLVAFDL 210
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAI F GQKF LIDTAG+R++ + + E SV + +AI ++VV
Sbjct: 211 PGTTRDAISVPFEH-AGQKFELIDTAGLRRKGKVFEA---IEKFSVVKTLQAIENANVVL 266
Query: 463 LVIEAMACITEQ 474
L+++A +T+Q
Sbjct: 267 LLLDATQGVTDQ 278
>gi|436838611|ref|YP_007323827.1| ribosome-associated GTPase EngA [Fibrella aestuarina BUZ 2]
gi|384070024|emb|CCH03234.1| ribosome-associated GTPase EngA [Fibrella aestuarina BUZ 2]
Length = 435
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 121/303 (39%), Positives = 178/303 (58%), Gaps = 41/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL+ +AI+ ++ GVTRDR YGR+ W +H F ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTLFNRLIEQRQAIMDNQSGVTRDRHYGRAEWTDHFFTVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E + I Q A++E+ V++F+VD G
Sbjct: 62 ---------------VGSEDV-----------FEEAIREQVEIALDEATVVLFVVDTMTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D+E A+ LR++ K + L NK E+ + + SEF+ LG P PISA +G+GT
Sbjct: 96 ITGLDDEFANVLRRS--KKPVFLVANKAETSDR-MHAASEFYGLGMGEPYPISAQTGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLD V T++ + IP IAI+GRPNVGKSS +N L+G +R IV+ I+G
Sbjct: 153 GDLLDAVVKHFP----TKEAENPDEGIPRIAILGRPNVGKSSFVNTLLGVERNIVTDIAG 208
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAI++ + G++F L DTAG+R++A ++ + E S R +A+ SDV ++
Sbjct: 209 TTRDAINSHYKA-FGKEFILTDTAGLRRKARVSDN---IEFYSTLRTIKAMEESDVCVIL 264
Query: 465 IEA 467
++A
Sbjct: 265 LDA 267
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P+ +PR+AI+GRPNVGKS+ N L+G R IV D G TRD + EF+L DT
Sbjct: 171 PDEGIPRIAILGRPNVGKSSFVNTLLGVERNIVTDIAGTTRDAINSHYKAFGKEFILTDT 230
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ ++ NI E + TI A+EES V +
Sbjct: 231 AGLRRKARVSDNI-EFYSTLRTI--------------------------KAMEESDVCVI 263
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF 331
L+D G+ D I K K +++ VNK ++ K + ++ W F
Sbjct: 264 LLDATRGMEGQDMTIIGQAIK--AKKGVVIMVNKWDAVEKD-HKTADVWRKEF 313
>gi|256383817|gb|ACU78387.1| ribosome-associated GTPase EngA [Mycoplasma mycoides subsp. capri
str. GM12]
gi|256384647|gb|ACU79216.1| ribosome-associated GTPase EngA [Mycoplasma mycoides subsp. capri
str. GM12]
gi|296455372|gb|ADH21607.1| ribosome-associated GTPase EngA [synthetic Mycoplasma mycoides
JCVI-syn1.0]
Length = 435
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 131/311 (42%), Positives = 186/311 (59%), Gaps = 45/311 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVG+PNVGKS+LFNR++ ++IV ++PGVTRDR+Y + W EF+L+DTGG+
Sbjct: 6 VAIVGKPNVGKSSLFNRIIKEKKSIVDNKPGVTRDRIYSSAEWLTREFILIDTGGIS--- 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ D + I + Q AIE++ VIIF+VD
Sbjct: 63 ------LSDQLFSNEIKL---------------------QTQIAIEQADVIIFVVDFLNN 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI-MQVSEFWSLGFSPLP-ISAISGTG 343
L D+ IA L K+ K +ILAVNK + +K I +F SLGFS L IS+ G G
Sbjct: 96 LDNDDKMIAKILHKS--KKPVILAVNKYD--KKTIDDHNYQFMSLGFSDLYFISSTHGIG 151
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
G+LLD V S + K E+++++++ IAI+GRPNVGKSS++N+LV E+R IVS I
Sbjct: 152 VGDLLDKVISYISK---NEEIIKDDS--TKIAIIGRPNVGKSSLVNSLVNENRMIVSEIE 206
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTT DA+D F+ + +K+ +IDTAGIRK++ + G T E S R+ AI +D+V L
Sbjct: 207 GTTLDAVDISFSYNK-KKYTVIDTAGIRKKSKL---GQTIEKYSYLRSLSAISNADIVLL 262
Query: 464 VIEAMACITEQ 474
+I+A IT+Q
Sbjct: 263 MIDATKPITDQ 273
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N LV NR IV + G T D + + + ++ ++DT G+
Sbjct: 176 KIAIIGRPNVGKSSLVNSLVNENRMIVSEIEGTTLDAVDISFSYNKKKYTVIDTAGIRKK 235
Query: 225 SK 226
SK
Sbjct: 236 SK 237
>gi|433454527|ref|ZP_20413094.1| ribosome-associated GTPase EngA [Mycoplasma sp. G5847]
gi|431933303|gb|ELK19896.1| ribosome-associated GTPase EngA [Mycoplasma sp. G5847]
Length = 435
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 132/311 (42%), Positives = 186/311 (59%), Gaps = 45/311 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVG+PNVGKS+LFNR++ ++IV D+PGVTRDR+Y + W EF+LVDTG
Sbjct: 6 VAIVGKPNVGKSSLFNRIIKEKKSIVDDKPGVTRDRIYSNAEWLTREFILVDTG------ 59
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
GI L+ + + I+ Q AI+++ VIIF+VD
Sbjct: 60 -------------------GISLSDQ-----LFSNEIQLQTQIAIQQADVIIFVVDFLNS 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI-MQVSEFWSLGFSPLP-ISAISGTG 343
L D+ IA L K+ K +ILAVNK + +K I EF SLGFS L IS+ G G
Sbjct: 96 LDKDDKMIAKLLHKS--KKPVILAVNKYD--KKTIDDHNYEFMSLGFSDLYFISSTHGIG 151
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
G+LLD V S + K ++++E+++ IAI+GRPNVGKSS++N+ V E+R IVS I
Sbjct: 152 IGDLLDKVISYISK---NDEIIEDDS--TKIAIIGRPNVGKSSLVNSFVNENRMIVSQIE 206
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTT DA+D F+ + +K+ +IDTAGIRK++ ++ T E S R+ AI +D+V L
Sbjct: 207 GTTLDAVDISFSYNK-KKYTVIDTAGIRKKSKLS---QTIEKYSYLRSLSAISNADIVLL 262
Query: 464 VIEAMACITEQ 474
+I+A IT+Q
Sbjct: 263 MIDATKPITDQ 273
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 46/200 (23%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N V NR IV G T D + + + ++ ++DT G+
Sbjct: 176 KIAIIGRPNVGKSSLVNSFVNENRMIVSQIEGTTLDAVDISFSYNKKKYTVIDTAGIRKK 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER----QATAAIEESCVIIFLV 280
SK + IE+ ++ +AI + +++ ++
Sbjct: 236 SK-------------------------------LSQTIEKYSYLRSLSAISNADIVLLMI 264
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFS 332
D +T D I + K +I+ VNK + + Q+ + F + ++
Sbjct: 265 DATKPITDQDTNIGGLIYDE--KKPVIIVVNKWDLVKNKEEQIIKKEEEIRAYFKYISYA 322
Query: 333 PLP-ISAISGTGTGELLDLV 351
+ ISAI T ++LDLV
Sbjct: 323 KIIFISAIDKTRVTKILDLV 342
>gi|253996245|ref|YP_003048309.1| GTP-binding protein EngA [Methylotenera mobilis JLW8]
gi|253982924|gb|ACT47782.1| small GTP-binding protein [Methylotenera mobilis JLW8]
Length = 484
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 124/314 (39%), Positives = 179/314 (57%), Gaps = 37/314 (11%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P + +VGRPNVGKS LFNRL A+V D PG+TRDR YGR +++VDTGG
Sbjct: 1 MIPTIVLVGRPNVGKSTLFNRLTKTRDALVADLPGLTRDRHYGRGIGASQPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S I++ +A +Q AI+E+ IIFLVD
Sbjct: 61 EPHTDS--GILKAMA---------------------------KQTLQAIDEADAIIFLVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G++ D EIA+ LR++ ++LAVNK E +K ++ ++F LG PL IS+
Sbjct: 92 GRQGVSPQDMEIANRLRRSKCP--VLLAVNKTEGMQKAVVS-ADFHELGLGYPLSISSAH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G G ++++L K+VE +RIP +AIVGRPNVGKS+++NAL+GE+R I
Sbjct: 149 GEGVRDIVELALENFKEVEDEPVTDYTGDRIPKVAIVGRPNVGKSTLVNALLGEERVIAY 208
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
GTTRD+I + G+ + LIDTAG+RKR + + E SV + +AI ++V
Sbjct: 209 DEPGTTRDSIHIDLE-KNGKHYTLIDTAGVRKRGRVFEA---IEKFSVIKTIQAIEEANV 264
Query: 461 VALVIEAMACITEQ 474
V LV++A ITEQ
Sbjct: 265 VILVVDAQEGITEQ 278
>gi|372489746|ref|YP_005029311.1| ribosome-associated GTPase EngA [Dechlorosoma suillum PS]
gi|359356299|gb|AEV27470.1| ribosome-associated GTPase EngA [Dechlorosoma suillum PS]
Length = 461
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 184/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P + +VGRPNVGKS LFNRL AIV D PG+TRDR YG G +++VDTGG
Sbjct: 3 PTLVLVGRPNVGKSTLFNRLTKTRDAIVADLPGLTRDRHYGHGKVGSKPYLVVDTGGFEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
++K I ++A RQ AI E+ ++F+VDG+
Sbjct: 63 LAKD--GIFHEMA---------------------------RQTEQAIAEADAVVFVVDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TA D+EIA+ LRK +++ +++AVNK E + ++ ++F+ LG P P+SA G
Sbjct: 94 VGITAQDKEIANKLRK--LERPVLVAVNKAEGMKHTVV-AADFYELGLGEPFPVSATHGD 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G +L+++ ++ E ED ++E P +AIVGRPNVGKS+++NAL+GE+R I +
Sbjct: 151 GVRDLVEMALADFP--EPDEDDAKDET--PRVAIVGRPNVGKSTLINALMGEERVIAFDM 206
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAI +F G+K+ LIDTAG+R+R + + E SV + ++I ++VV
Sbjct: 207 PGTTRDAIFVDFER-NGRKYTLIDTAGLRRRGKVFEA---VEKFSVVKTLQSIEDANVVV 262
Query: 463 LVIEAMACITEQ 474
LV++A I++Q
Sbjct: 263 LVLDADQDISDQ 274
>gi|253682586|ref|ZP_04863383.1| ribosome-associated GTPase EngA [Clostridium botulinum D str. 1873]
gi|253562298|gb|EES91750.1| ribosome-associated GTPase EngA [Clostridium botulinum D str. 1873]
Length = 438
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 184/312 (58%), Gaps = 41/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y ++ W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVDDMPGVTRDRIYAQAEWLNNKFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + + VA+M RQA AIE + V++F+VDG+
Sbjct: 62 ----EPE-------------------SEDVIVAQM----RRQAQMAIEMADVVLFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD E+A LRK +K I+LAVNK + R+ + EF++LG P+ ISA G
Sbjct: 95 QGLADADREVAQMLRK--ANKSIVLAVNKIDR-RQLDDNIYEFYNLGLGDPMAISASQGL 151
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
G G+LLD V + + + EEN IA+VGRPNVGKSS++N ++GE++ IVS I
Sbjct: 152 GLGDLLDEVVDKFPETNEDD----EENEYIRIAMVGRPNVGKSSLINRILGEEKHIVSNI 207
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD++D+ EG KF LIDTAG+R+++ I E S R +I +DV
Sbjct: 208 PGTTRDSVDSYIEREEG-KFALIDTAGLRRKSKIKEQ---VERYSAVRTIASIENADVCI 263
Query: 463 LVIEAMACITEQ 474
L+++A I EQ
Sbjct: 264 LMLDAEQGIAEQ 275
>gi|408490194|ref|YP_006866563.1| GTP-binding protein EngA [Psychroflexus torquis ATCC 700755]
gi|408467469|gb|AFU67813.1| GTP-binding protein EngA [Psychroflexus torquis ATCC 700755]
Length = 434
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 176/303 (58%), Gaps = 42/303 (13%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS LFNR++ AIV GVTRDR YG+S W EF L+DTGG +
Sbjct: 5 VAVVGRPNVGKSTLFNRMIKRREAIVDSASGVTRDRHYGKSDWNGREFTLIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
IG + + I++Q AI+E+ VIIF+VD G
Sbjct: 62 ---------------IGSDDV-----------FEKEIDKQVELAIDEADVIIFVVDVITG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T DE+++ LRK ++K ++L VNK +S K EF++LG ISA SG+GT
Sbjct: 96 ITPMDEDVSKLLRK--INKPVVLCVNKVDS-NKNRTDALEFYNLGLGEYYSISATSGSGT 152
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
GELLD V +L + E E+ A+VGRPN GKSS +NAL+GEDR IV+ I G
Sbjct: 153 GELLDAVVEKLPERELEEEEDLP-----KFAVVGRPNAGKSSFINALIGEDRYIVTDIPG 207
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRD+IDT +T G F+L+DTAGIR++A + E SV R+ RAI SDV +V
Sbjct: 208 TTRDSIDTRYT-RFGFDFKLVDTAGIRRKAKVKED---LEFYSVMRSVRAIENSDVCLIV 263
Query: 465 IEA 467
++A
Sbjct: 264 MDA 266
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 31/161 (19%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
A+VGRPN GKS+ N L+G +R IV D PG TRD + R +F LVDT G+ +
Sbjct: 178 AVVGRPNAGKSSFINALIGEDRYIVTDIPGTTRDSIDTRYTRFGFDFKLVDTAGI----R 233
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + EDL + + ++ AIE S V + ++D G
Sbjct: 234 RKAKVKEDLEFYSVM-----------------------RSVRAIENSDVCLIVMDASRGF 270
Query: 287 TAADEEIADWL-RKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+ + I WL KN K I++ VNK + +K + +F
Sbjct: 271 DSQVQSIF-WLAEKN--RKGIVILVNKWDLVKKETNTMKDF 308
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+A+VGRPNVGKS++ N ++ IV SG TRD + + G++F LIDT G
Sbjct: 5 VAVVGRPNVGKSTLFNRMIKRREAIVDSASGVTRDRHYGK-SDWNGREFTLIDTGG---- 59
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACIT 472
+ S E + AI +DV+ V++ + IT
Sbjct: 60 -YVIGSDDVFEKEIDKQVELAIDEADVIIFVVDVITGIT 97
>gi|422321708|ref|ZP_16402753.1| GTP-binding protein engA [Achromobacter xylosoxidans C54]
gi|317403342|gb|EFV83855.1| GTP-binding protein engA [Achromobacter xylosoxidans C54]
Length = 451
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 133/316 (42%), Positives = 183/316 (57%), Gaps = 41/316 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL A+V D G+TRDR YG GE F+++DTGG
Sbjct: 5 PVVALVGRPNVGKSTLFNRLTRSRAALVADFSGLTRDRHYGEGRVGEIPFIVIDTGGFEP 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K +GI L + RQ AI E+ V++FLVD +
Sbjct: 65 VAK-----------------DGILLE------------MARQTRQAIAEADVVVFLVDAR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
AGL A D EIA LRK+ + ++LAVNK E G ++EF LG P PISA G
Sbjct: 96 AGLNAHDHEIATLLRKSGQQR-VLLAVNKAEGMGAG-AAIAEFHELGLGQPYPISAAHGD 153
Query: 343 GTGELLDLVCSELKKVEGTEDLV----EEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G +L++L +L + E+ E ++RI +AIVGRPNVGKS+++N L+GE+R I
Sbjct: 154 GIVDLIELALQDLAEPPAEEEEPAEEGEHDHRI-KLAIVGRPNVGKSTLINTLMGEERVI 212
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
+ GTTRDAI+ +F +G+++ LIDTAG+RKR + + E SV + +AI S
Sbjct: 213 AFDMPGTTRDAIEIDFE-RDGRRYTLIDTAGLRKRGKVFEA---VEKFSVIKTLQAIEAS 268
Query: 459 DVVALVIEAMACITEQ 474
+VV L+++A I+EQ
Sbjct: 269 NVVLLMLDAQTEISEQ 284
>gi|160880522|ref|YP_001559490.1| GTP-binding protein EngA [Clostridium phytofermentans ISDg]
gi|189037143|sp|A9KLK7.1|DER_CLOPH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|160429188|gb|ABX42751.1| small GTP-binding protein [Clostridium phytofermentans ISDg]
Length = 441
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 179/310 (57%), Gaps = 40/310 (12%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS LFN L G +IV D PGVTRDR+Y W + +F LVDTGG+ S
Sbjct: 6 VAVVGRPNVGKSTLFNALAGDRISIVKDTPGVTRDRIYADITWLDKQFTLVDTGGIEPES 65
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K M + + QA AI + VI+F+VD + G
Sbjct: 66 KDM-----------------------------MLTYMREQAEIAIATADVIMFVVDVRQG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
L AD ++AD LR++ K +IL VNK ++ K + V EF++LG P+P+SA S G
Sbjct: 97 LLDADNKVADMLRRS--GKPVILVVNKVDNFDKFMPDVYEFYNLGIGDPVPVSAASMLGF 154
Query: 345 GELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISG 404
G+LLDLV E+ E P IAIVG+PNVGKSSI+N L+GE+R IVS ++G
Sbjct: 155 GDLLDLVVGHFPPEALEEEEDER----PRIAIVGKPNVGKSSIINKLLGENRVIVSDVAG 210
Query: 405 TTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
TTRDAIDT T + + + IDTAG+R+++ I E S+ R A+ R+DVV +V
Sbjct: 211 TTRDAIDTAVTWNK-KDYVFIDTAGLRRKSKIKEE---LERFSIIRTVSAVERADVVVVV 266
Query: 465 IEAMACITEQ 474
I+A +TEQ
Sbjct: 267 IDANEGVTEQ 276
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 38/195 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVG+PNVGKS++ N+L+G NR IV D G TRD + W + +++ +DT G+
Sbjct: 178 PRIAIVGKPNVGKSSIINKLLGENRVIVSDVAGTTRDAIDTAVTWNKKDYVFIDTAGLRR 237
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + +E +I T+ +A+E + V++ ++D
Sbjct: 238 KSKIKEE-LERFSIIRTV--------------------------SAVERADVVVVVIDAN 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP----L 334
G+T D +IA + K II+AVNK ++ K + ++ + L F P +
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGIIIAVNKWDAIEKDDKTIYKYTNRIREILSFLPYAEIM 328
Query: 335 PISAISGTGTGELLD 349
+SA +G +L D
Sbjct: 329 FLSAKTGQRVTKLFD 343
>gi|313665450|ref|YP_004047321.1| ribosome-associated GTPase EngA [Mycoplasma leachii PG50]
gi|392389052|ref|YP_005907461.1| GTP-binding protein engA [Mycoplasma leachii 99/014/6]
gi|312949987|gb|ADR24583.1| ribosome-associated GTPase EngA [Mycoplasma leachii PG50]
gi|339276697|emb|CBV67276.1| GTP-binding protein engA [Mycoplasma leachii 99/014/6]
Length = 435
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 135/311 (43%), Positives = 184/311 (59%), Gaps = 45/311 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVG+PNVGKS+LFNR++ ++IV ++PGVTRDR+Y + W EF+LVDTGG +S
Sbjct: 6 VAIVGKPNVGKSSLFNRIIKEKKSIVDNKPGVTRDRIYSNAEWLTREFILVDTGG---IS 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
Q ++ I T I AIE++ VIIF+VD
Sbjct: 63 IDQQLFSNEIQIQTQI---------------------------AIEQADVIIFVVDFLNR 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI-MQVSEFWSLGFSPLP-ISAISGTG 343
L D+ IA L K+ K +ILA+NK + +K I EF +LGFS L IS+ G G
Sbjct: 96 LDKDDKMIAKILHKS--KKPVILAINKYD--KKTIDDHNYEFMNLGFSDLYFISSTHGIG 151
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
G+LLD V S + K + DL ++ + IAI+GRPNVGKSS++N+LV E+R IVS I
Sbjct: 152 IGDLLDKVISYISKNDA--DLKDDSTK---IAIIGRPNVGKSSLVNSLVNENRMIVSEIE 206
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTT DA+D F+ + K+ +IDTAGIRK++ + G T E S R+ AI SD+V L
Sbjct: 207 GTTLDAVDISFSYNKN-KYTVIDTAGIRKKSKL---GQTVEKYSYLRSLSAITNSDIVLL 262
Query: 464 VIEAMACITEQ 474
+I+A IT+Q
Sbjct: 263 MIDATKPITDQ 273
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N LV NR IV + G T D + + ++++ ++DT G+
Sbjct: 176 KIAIIGRPNVGKSSLVNSLVNENRMIVSEIEGTTLDAVDISFSYNKNKYTVIDTAGIRKK 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK L + + S+ +AI S +++ ++D
Sbjct: 236 SK---------------------LGQTVEKYSYLRSL------SAITNSDIVLLMIDATK 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE-----FWSLGFSPLP- 335
+T D I + K +I+ VNK ++ ++ I++ E F + ++ +
Sbjct: 269 PITDQDTNIGGLIYDE--KKPVIIVVNKWDLVKNKQEQILKKEEEIRAYFKYISYAKIIF 326
Query: 336 ISAISGTGTGELLDLVC 352
ISA T ++LDLV
Sbjct: 327 ISAPDKTRVTKILDLVA 343
>gi|323453254|gb|EGB09126.1| hypothetical protein AURANDRAFT_37344 [Aureococcus anophagefferens]
Length = 540
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 136/333 (40%), Positives = 186/333 (55%), Gaps = 44/333 (13%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLV--GGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
+ VP P VAI+GRPNVGKS+L NRL G I V+E GVTRDR+Y ++ W
Sbjct: 60 LKRVPRGARPTVAIIGRPNVGKSSLVNRLCDAGKKGTIAVNEAGVTRDRVYQKAEWCGRT 119
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F +VDTGG+L ED EG A I QAT A+ E
Sbjct: 120 FDVVDTGGLL---------FED--------EEG----------ALFLDEIREQATLALRE 152
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKF--IILAVNKCESPRKGIMQVSEFWSLG 330
+C + +VDG+AG T D++IA +LR+ + D+ ++LAVNKCES + V++FW LG
Sbjct: 153 ACACVVVVDGRAGSTRLDDDIARFLRR-WPDQTLEVVLAVNKCESAEREAELVADFWPLG 211
Query: 331 FS-PLPISAISGTGTGELLDLVCSEL-KKVEGTEDLVEEENRIPA-----IAIVGRPNVG 383
P SAI G G E+LD + L +E ++ + I A + +GRPNVG
Sbjct: 212 LGEPRACSAIHGNGVAEVLDALLPALDASIEAKAAQIKTMDAIDAKPHVNVCFLGRPNVG 271
Query: 384 KSSILNALV--GEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGS 441
KSS+LN + GE R IVS ++GTTRDA+D E +G FR +DTAG+R++A + G
Sbjct: 272 KSSLLNRFLGPGETRAIVSDVAGTTRDAVDAELD-VDGTIFRFVDTAGVRRKARVTKQG- 329
Query: 442 TTEALSVNRAFRAIRRSDVVALVIEAMACITEQ 474
TE V RA R R +DVV LV++A +++Q
Sbjct: 330 -TEPEMVARALRTARLADVVLLVVDATQELSDQ 361
>gi|348590095|ref|YP_004874557.1| GTP-binding protein EngA [Taylorella asinigenitalis MCE3]
gi|347973999|gb|AEP36534.1| GTP-binding protein EngA [Taylorella asinigenitalis MCE3]
Length = 459
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 186/325 (57%), Gaps = 51/325 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL AIV D G+TRDR YG G+ F+++DTGG
Sbjct: 5 PVVALVGRPNVGKSTLFNRLTRSRNAIVADYSGLTRDRHYGEGRVGDRPFLVIDTGGF-- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K + IM+++A RQ AI ES V+IFLVD +
Sbjct: 63 EPKVKTGIMKEMA---------------------------RQTELAISESDVVIFLVDAR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+G+ A D EIA LRK + +ILAVNK E + +EF LG PL IS+ G
Sbjct: 96 SGINAHDHEIAVKLRKVGVP--VILAVNKAEGLQAS-QASAEFHELGLGEPLAISSAHGD 152
Query: 343 GTGELLDLVCSELKKVE-----GTEDLVE--------EENRIPAIAIVGRPNVGKSSILN 389
G L+++ S++ +VE +ED V+ +++RI +A+VGRPNVGKS+++N
Sbjct: 153 GVANLIEVALSKIPQVEDETSISSEDEVDSDSNETEFKDHRI-KLAVVGRPNVGKSTLIN 211
Query: 390 ALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVN 449
+L+GE R I + GTTRDAI+ +F G+K++LIDTAG+RKR + S E SV
Sbjct: 212 SLLGEQRVIAFDMPGTTRDAIEIDFES-NGKKYKLIDTAGLRKRGKVFES---IEKFSVI 267
Query: 450 RAFRAIRRSDVVALVIEAMACITEQ 474
+ +AI +VV L+++A + I+EQ
Sbjct: 268 KTLQAIEACNVVVLILDAQSEISEQ 292
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A+VGRPNVGKS L N L+G R I D PG TRD + ++ L+DT G+
Sbjct: 195 KLAVVGRPNVGKSTLINSLLGEQRVIAFDMPGTTRDAIEIDFESNGKKYKLIDTAGLRKR 254
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K +I E ++ T+ AIE V++ ++D Q+
Sbjct: 255 GKVFESI-EKFSVIKTL--------------------------QAIEACNVVVLILDAQS 287
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK----CESPRKGIMQVSE--FWSLGFSPLP-IS 337
++ D IA ++ ++ + +++A+NK E R+ +++ E L F+ + IS
Sbjct: 288 EISEQDAHIAGFILES--GRALVVAINKWDGLSEDKREWVIRELERKLRFLSFAKVHYIS 345
Query: 338 AISGTGTGELLDLV 351
A+ G LL V
Sbjct: 346 ALKAYGIKSLLKSV 359
>gi|94267274|ref|ZP_01290827.1| Small GTP-binding protein domain:GTP-binding [delta proteobacterium
MLMS-1]
gi|93452066|gb|EAT02754.1| Small GTP-binding protein domain:GTP-binding [delta proteobacterium
MLMS-1]
Length = 453
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 126/314 (40%), Positives = 176/314 (56%), Gaps = 35/314 (11%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS+LFNR+ GG +AIV PGVTRDR Y + W + FML+DTGG+
Sbjct: 7 LPLVALVGRPNVGKSSLFNRIAGGRKAIVDPTPGVTRDRHYQQVSWNQRHFMLIDTGGIE 66
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S+ +P+ +I Q+ A+ E+ VI+ L+D
Sbjct: 67 GDKSSE-----------------VPIN----------RLIGEQSRQAVAEADVILLLLDA 99
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISG 341
+ G+T D ++ + LR++ K + VNK ++P + + F+ LG L P+SA G
Sbjct: 100 RQGVTPDDYQVVEILRRS--GKPVHYLVNKIDAPEQVDKLLPTFYELGVPQLWPLSASHG 157
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPA-IAIVGRPNVGKSSILNALVGEDRTIVS 400
G ELLD V +EL E P +A +GRPNVGKSS++N L+G +R +VS
Sbjct: 158 LGLAELLDAVVAELGPAPAEPAAEAESQPQPVRVAFIGRPNVGKSSLINRLLGSERMVVS 217
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
+ GTTRD++D+ E Q +RLIDTAGIR++ + S E SV RA A+ R D+
Sbjct: 218 EVPGTTRDSVDSLLIRGEKQ-YRLIDTAGIRRKGKVRES---VEKFSVMRALAALERCDL 273
Query: 461 VALVIEAMACITEQ 474
LVI+A ITEQ
Sbjct: 274 ALLVIDAAEGITEQ 287
>gi|42560947|ref|NP_975398.1| GTP-binding protein EngA [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|81829393|sp|Q6MTJ6.1|DER_MYCMS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|42492444|emb|CAE77040.1| conserved GTPase of unknown function [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
gi|301321230|gb|ADK69873.1| ribosome-associated GTPase EngA [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 435
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 135/311 (43%), Positives = 183/311 (58%), Gaps = 45/311 (14%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+GRPNVGKS+LFNR++ ++IV ++PGVTRDR+Y + W EF+LVDTGG +S
Sbjct: 6 VAIIGRPNVGKSSLFNRIIKEKKSIVDNKPGVTRDRIYSNAEWLTREFILVDTGG---IS 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
Q ++ I T I AIE++ VIIF+VD
Sbjct: 63 IDQQLFSNEIQIQTQI---------------------------AIEQADVIIFVVDFLNR 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI-MQVSEFWSLGFSPLP-ISAISGTG 343
L D+ IA L K+ K +ILA+NK + +K I EF +LGFS L IS+ G G
Sbjct: 96 LDKDDKMIAKILHKS--KKPVILAINKYD--KKTIDDHNYEFMNLGFSDLYFISSTHGIG 151
Query: 344 TGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
G+LLD V S + K DL ++ + IAI+GRPNVGKSS++N+LV E+R IVS I
Sbjct: 152 IGDLLDKVISYISK--NDVDLKDDSTK---IAIIGRPNVGKSSLVNSLVNENRMIVSEIE 206
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTT DA+D F+ + K+ +IDTAGIRK++ + G T E S R+ AI SD+V L
Sbjct: 207 GTTLDAVDISFSYNKN-KYTVIDTAGIRKKSKL---GQTVEKYSYLRSLSAITNSDIVLL 262
Query: 464 VIEAMACITEQ 474
+I+A IT+Q
Sbjct: 263 MIDATKPITDQ 273
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 38/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N LV NR IV + G T D + + ++++ ++DT G+
Sbjct: 176 KIAIIGRPNVGKSSLVNSLVNENRMIVSEIEGTTLDAVDISFSYNKNKYTVIDTAGIRKK 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK L + + S+ +AI S +++ ++D
Sbjct: 236 SK---------------------LGQTVEKYSYLRSL------SAITNSDIVLLMIDATK 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE-----FWSLGFSPLP- 335
+T D I + K +I+ VNK ++ ++ I++ E F + ++ +
Sbjct: 269 PITDQDTNIGGLIYDE--KKPVIIVVNKWDLVKNKQEQILKKEEEIRAYFKYISYAKIIF 326
Query: 336 ISAISGTGTGELLDLVC 352
ISA+ T ++LDLV
Sbjct: 327 ISALDKTRVTKILDLVA 343
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,437,087,988
Number of Sequences: 23463169
Number of extensions: 331480489
Number of successful extensions: 2101023
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13997
Number of HSP's successfully gapped in prelim test: 6418
Number of HSP's that attempted gapping in prelim test: 2017574
Number of HSP's gapped (non-prelim): 58241
length of query: 484
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 337
effective length of database: 8,910,109,524
effective search space: 3002706909588
effective search space used: 3002706909588
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)