BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011492
(484 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B2J1L2|DER_NOSP7 GTPase Der OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
GN=der PE=3 SV=1
Length = 456
Score = 295 bits (756), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 168/313 (53%), Positives = 208/313 (66%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y +FW EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYMPAFWNGREFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ E+C IF+VDG
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQAMTALAEACAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T+AD+EIA+W+R+ + ++LAVNKCESP +G+MQ +EFW LG P PISAI G
Sbjct: 94 QTGPTSADQEIAEWMRQQRVP--VLLAVNKCESPDQGLMQAAEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + + + VE + E N I +AIVGRPNVGKSS+LNA VGE+R IVSP
Sbjct: 152 SGTGELLDELVNHIPAVED----IPETNEI-KVAIVGRPNVGKSSLLNAFVGEERAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT +GQ +RLIDTAGIRK+ I TE S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDT-VIERDGQTYRLIDTAGIRKKKHIEYG---TEFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LV++A+ +TEQ
Sbjct: 263 LLVLDAVDGVTEQ 275
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 38/206 (18%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+ ++PE +VAIVGRPNVGKS+L N VG RAIV G TRD + +
Sbjct: 168 VEDIPETNEIKVAIVGRPNVGKSSLLNAFVGEERAIVSPISGTTRDAIDTVIERDGQTYR 227
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ + I T ++ R A AI +
Sbjct: 228 LIDTAGIRK-------------------KKHIEYGTEFFSINR--------AFKAIRRAD 260
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----L 329
V++ ++D G+T D+++A + + + I+ VNK ++ K + ++ L
Sbjct: 261 VVLLVLDAVDGVTEQDQKLAGRIIEE--GRACIIVVNKWDAVEKDSYTIYDYEKTLQSRL 318
Query: 330 GFS----PLPISAISGTGTGELLDLV 351
F+ + +SA+SG ++L+LV
Sbjct: 319 HFTEWAETIFVSALSGQRVEKILELV 344
>sp|Q8YZH7|DER_NOSS1 GTPase Der OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=der PE=3
SV=1
Length = 453
Score = 291 bits (746), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 172/313 (54%), Positives = 206/313 (65%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y ++W + EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYLPAYWSDREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA AA+ E+ IF+V+G
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQALAALHEASAAIFVVNG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G +ADEEIA+WLR+ + F LAVNKCESP +G +Q SEFW LG P PISAI G
Sbjct: 94 QTGPNSADEEIAEWLRQQPVPVF--LAVNKCESPDQGSIQASEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + L V TE +EE N I IAI+GRPNVGKSS+LNA GE+R IVSP
Sbjct: 152 NGTGELLDELIKHLPPV--TE--LEENNEI-KIAIIGRPNVGKSSLLNAFAGEERVIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT F +GQ +RLIDTAGIRK+ +I TE S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDT-FIERDGQNYRLIDTAGIRKKKSIDYG---TEFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 263 LLVIDALDGVTEQ 275
>sp|Q3M929|DER_ANAVT GTPase Der OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937)
GN=der PE=3 SV=1
Length = 453
Score = 290 bits (743), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 170/313 (54%), Positives = 205/313 (65%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y ++W + EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYLPAYWSDREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA AA+ E+ IF+V+G
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQALAALHEASAAIFVVNG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G +ADEEIA+WLR+ + F LAVNKCESP +G +Q SEFW LG P PISAI G
Sbjct: 94 QTGPNSADEEIAEWLRQQPVPVF--LAVNKCESPDQGSIQASEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + +K + T +L EEN IAI+GRPNVGKSS+LNA GE+R IVSP
Sbjct: 152 NGTGELLDEL---IKHLPPTTEL--EENNEIKIAIIGRPNVGKSSLLNAFAGEERVIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT F GQ +RLIDTAGIRK+ +I TE S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDT-FIERNGQNYRLIDTAGIRKKKSIDYG---TEFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 263 LLVIDALDGVTEQ 275
>sp|B8HQE1|DER_CYAP4 GTPase Der OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=der
PE=3 SV=1
Length = 453
Score = 283 bits (723), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 162/316 (51%), Positives = 205/316 (64%), Gaps = 46/316 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NRL G AIV D+PGVTRDR Y SFW + +F++VDTGG++
Sbjct: 3 LPVVAIVGRPNVGKSTLVNRLTGERVAIVHDQPGVTRDRTYRPSFWQDRDFLVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ E +PL I +Q A+ E+ V I +VDG
Sbjct: 63 FADDT----------------EFLPL-------------IRQQVVTALSEARVAILVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+TAADEEIA WLR+ + +++AVNKCESP++G+ Q +EFW LG P PISAI G
Sbjct: 94 QQGITAADEEIAQWLRQQSLP--VLVAVNKCESPQQGLAQGAEFWELGLGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVE---GTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
GTGELLD V S L + G ED++ +AIVGRPNVGKSS+LNA+VGE R I
Sbjct: 152 NGTGELLDQVVSYLPPTDQQAGEEDIIN-------VAIVGRPNVGKSSLLNAVVGEQRAI 204
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VSPISGTTRDAIDT +GQ++RLIDTAGIRK+ + E +NRAF+AI+R+
Sbjct: 205 VSPISGTTRDAIDT-LVERDGQRYRLIDTAGIRKQKNVDYG---PEFFGINRAFKAIQRA 260
Query: 459 DVVALVIEAMACITEQ 474
+VV LV++A+ +TEQ
Sbjct: 261 EVVLLVLDALDGVTEQ 276
>sp|B7KHD2|DER_CYAP7 GTPase Der OS=Cyanothece sp. (strain PCC 7424) GN=der PE=3 SV=1
Length = 452
Score = 278 bits (712), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 163/313 (52%), Positives = 200/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G +AIV DEPG+TRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGDQQAIVHDEPGITRDRTYRPAFWQDRDFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA A+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAMTALAEAHAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T ADEEIA+WLR + IILAVNKCES +G++Q SEFW LG P PIS+I G
Sbjct: 94 QTGPTPADEEIANWLRSQSVP--IILAVNKCESVEQGLIQASEFWQLGLGEPYPISSIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + L E + E N I +AIVGRPNVGKSS+LNAL GE+R IVSP
Sbjct: 152 SGTGELLDKLIIYLPTTES----LSETNEI-KVAIVGRPNVGKSSLLNALTGENRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAID E Q++RLIDTAGIR++ + E S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDMVVQRNE-QQYRLIDTAGIRRKKNVEYGA---EFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
VI+A+ IT+Q
Sbjct: 263 LFVIDALDGITDQ 275
>sp|B0JFL6|DER_MICAN GTPase Der OS=Microcystis aeruginosa (strain NIES-843) GN=der PE=3
SV=1
Length = 452
Score = 275 bits (703), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 158/313 (50%), Positives = 195/313 (62%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QGGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD V L EN +AI+GRPNVGKSS+LNAL G+ R IVSP
Sbjct: 152 SGTGELLDAVIKYLPPAAEI-----PENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD+IDT EGQ +RLIDTAGIR++ + E S+NRAF+AIRRSDVV
Sbjct: 207 ISGTTRDSIDT-LIEREGQVYRLIDTAGIRRKKNVDYGA---EFFSINRAFKAIRRSDVV 262
Query: 462 ALVIEAMACITEQ 474
VI+ + +TEQ
Sbjct: 263 LFVIDVLDGVTEQ 275
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A + + + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAGRIIEE--GRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAG 429
++P +AI+GRPNVGKS+++N + G+ + IV G TRD + + F+++DT G
Sbjct: 2 KLPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCD-RDFQIVDTGG 60
Query: 430 IRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACIT----EQADW 477
+ + + S L +A A+ + V V++ IT E A W
Sbjct: 61 L-----VFNDDSEFLPLIREQALIALAEASVAIFVVDGQGGITAGDREIAAW 107
>sp|Q8DKI1|DER_THEEB GTPase Der OS=Thermosynechococcus elongatus (strain BP-1) GN=der
PE=3 SV=1
Length = 449
Score = 271 bits (692), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 160/313 (51%), Positives = 199/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS NRL G AIV DEPGVTRDR Y +FW + EF++VDTGG++
Sbjct: 3 LPIVAVVGRPNVGKSTFVNRLAGERDAIVHDEPGVTRDRTYRPAFWQDREFLVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S + +PL I +QA A++E+ IF+VDG
Sbjct: 63 FDDDS----------------DFLPL-------------IRQQAELALQEATAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG TA D EIA WLR+ + +++AVNKCES + G +Q +EFWSLG P PIS+I G
Sbjct: 94 QAGPTALDYEIAAWLRQ--LSLPVLVAVNKCESRQMGQVQAAEFWSLGLGEPYPISSIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + + L E + E + +AI GRPNVGKSS+LNAL+G DR IVSP
Sbjct: 152 SGTGELLDQLITYLPAGETLPEAPEIQ-----VAIAGRPNVGKSSLLNALIGSDRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT G ++R IDTAGIRKR +A E SV+RAF+AI RSDVV
Sbjct: 207 ISGTTRDAIDTVIEH-GGTQYRFIDTAGIRKRTHVAYG---PEMFSVHRAFKAIHRSDVV 262
Query: 462 ALVIEAMACITEQ 474
LV++A+ ITEQ
Sbjct: 263 LLVLDALEEITEQ 275
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 31/160 (19%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
+PE +VAI GRPNVGKS+L N L+G +RAIV G TRD + G ++ +
Sbjct: 170 TLPEAPEIQVAIAGRPNVGKSSLLNALIGSDRAIVSPISGTTRDAIDTVIEHGGTQYRFI 229
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCV 275
DT G+ + VA P M +A AI S V
Sbjct: 230 DTAGI----------------------------RKRTHVAYGPEMFSVHRAFKAIHRSDV 261
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ ++D +T D+ +A + + +L VNK ++
Sbjct: 262 VLLVLDALEEITEQDQRLAGHIADQ--GRACVLIVNKWDA 299
>sp|B7K1S0|DER_CYAP8 GTPase Der OS=Cyanothece sp. (strain PCC 8801) GN=der PE=3 SV=1
Length = 452
Score = 270 bits (690), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/313 (49%), Positives = 198/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPG+TRDR Y FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLANRLAGDQHAIVHDEPGITRDRTYRPGFWQDRDFQIVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I Q+ AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQSLAALNEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
Q G T D EIADWLR+ + ++LAVNKCESP G++Q ++FW LG +P PIS I G
Sbjct: 94 QTGPTTGDLEIADWLRQQPVP--VLLAVNKCESPELGLIQATQFWELGLGNPYPISGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + + L E + + + I +AI+GRPNVGKSS+LNAL+GE+R IVSP
Sbjct: 152 NGTGELLDDLITYLPPPEE----ITQSDEI-KVAIIGRPNVGKSSLLNALLGENRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT E Q +RLIDTAGIR++ + E S+NRAF+AIRR DVV
Sbjct: 207 ISGTTRDAIDTVIQHNE-QTYRLIDTAGIRRKKNVEYGA---EFFSINRAFKAIRRCDVV 262
Query: 462 ALVIEAMACITEQ 474
VI+A+ +T+Q
Sbjct: 263 LFVIDAIDGVTDQ 275
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 38/198 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+GRPNVGKS+L N L+G NRAIV G TRD + E + L+DT G+
Sbjct: 178 KVAIIGRPNVGKSSLLNALLGENRAIVSPISGTTRDAIDTVIQHNEQTYRLIDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ G E + +A AI V++F++D
Sbjct: 235 -RRKKNV--------EYGAEFFSI---------------NRAFKAIRRCDVVLFVIDAID 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL------PI-- 336
G+T D ++AD + + + ++L +NK ++ K + E+ + FS L PI
Sbjct: 271 GVTDQDLKLADRIIEE--GRSVVLVINKWDAVDKDSYTIYEYKTNIFSRLYFMEWAPIIF 328
Query: 337 -SAISGTGTGELLDLVCS 353
SA++G ++L+LV S
Sbjct: 329 VSAMTGQRVNKILELVNS 346
>sp|B1XLH8|DER_SYNP2 GTPase Der OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 /
PR-6) GN=der PE=3 SV=1
Length = 453
Score = 270 bits (690), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/313 (50%), Positives = 200/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +A++GRPNVGKS L NR+ G +AIV D+PG+TRDR Y FW + F +VDTGG+
Sbjct: 3 LPIIAVIGRPNVGKSTLVNRIAGDQQAIVHDQPGITRDRTYRPGFWQDRNFQIVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA A+ E+ V +F+VDG
Sbjct: 62 --------VFDDHE-------EFLPL-------------IREQAAIALAEAAVALFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
QAGL AAD+EIADWLR+ + ++LAVNKCES +G Q +EFW LG P PISAI G
Sbjct: 94 QAGLNAADQEIADWLRQQNVP--VVLAVNKCESLEQGYTQAAEFWELGMEEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG+LLD V L + VEE+ I +AI+GRPNVGKSS+LNAL GE R IVSP
Sbjct: 152 SGTGDLLDKVIEYLPTITD----VEEDTTI-NVAIIGRPNVGKSSLLNALTGEQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT GQ++RLIDTAGIR++ + E S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDT-IIERNGQQYRLIDTAGIRRKKNVDYGA---EFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
VI+ + +TEQ
Sbjct: 263 LFVIDVLDGVTEQ 275
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 44/210 (20%)
Query: 154 TIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
TI +V E VAI+GRPNVGKS+L N L G RAIV G TRD + ++
Sbjct: 167 TITDVEEDTTINVAIIGRPNVGKSSLLNALTGEQRAIVSPISGTTRDAIDTIIERNGQQY 226
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
L+DT G+ + + N+ G E + +A AI +
Sbjct: 227 RLIDTAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRA 259
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF------- 326
V++F++D G+T D ++A R + +I+ NK ++ K ++++
Sbjct: 260 DVVLFVIDVLDGVTEQDLKLAG--RIIDEGRAVIIVANKWDAVEKDTYTINQYRKELQAR 317
Query: 327 -----WSLGFSPLPISAISGTGTGELLDLV 351
W+ L ISA +G ++LDLV
Sbjct: 318 LFFMEWA---EMLFISAQTGQRVNKILDLV 344
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTG-PEGQKFRLIDTA 428
++P IA++GRPNVGKS+++N + G+ + IV G TRD T G + + F+++DT
Sbjct: 2 KLPIIAVIGRPNVGKSTLVNRIAGDQQAIVHDQPGITRDR--TYRPGFWQDRNFQIVDTG 59
Query: 429 GI 430
GI
Sbjct: 60 GI 61
>sp|Q119L7|DER_TRIEI GTPase Der OS=Trichodesmium erythraeum (strain IMS101) GN=der PE=3
SV=1
Length = 453
Score = 270 bits (689), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 157/313 (50%), Positives = 196/313 (62%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS + NRL AIV DEPG+TRDR Y ++W + EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTIVNRLAESKDAIVHDEPGITRDRTYRNAYWEDREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ V IF+VDG
Sbjct: 62 --------VFDD-------NTEFLPL-------------IREQAMAALVEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLT DEEIA WLR+ + I+LAVNKCES +G+ Q + FW LG P PIS I G
Sbjct: 94 QTGLTGGDEEIAQWLRQQTIP--ILLAVNKCESITEGLTQAAMFWELGLGEPYPISGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTGELLD + + L T+ + E N+ IAIVGRPNVGKSS+LN+ +GE R IVSP
Sbjct: 152 NGTGELLDDLITYLP----TQGEITETNQ-TKIAIVGRPNVGKSSLLNSFIGEKRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT G+ +RLIDTAGIRK+ + E +NRAF+AIRR++VV
Sbjct: 207 ISGTTRDAIDT-VVERNGKTYRLIDTAGIRKKKNVEYGA---EFFGINRAFKAIRRAEVV 262
Query: 462 ALVIEAMACITEQ 474
VI+A+ +TEQ
Sbjct: 263 MFVIDALDGVTEQ 275
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 29/165 (17%)
Query: 154 TIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
T G + E ++AIVGRPNVGKS+L N +G RAIV G TRD + +
Sbjct: 167 TQGEITETNQTKIAIVGRPNVGKSSLLNSFIGEKRAIVSPISGTTRDAIDTVVERNGKTY 226
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
L+DT G+ + + N+ G E + +A AI +
Sbjct: 227 RLIDTAGI----RKKKNV--------EYGAEFFGI---------------NRAFKAIRRA 259
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
V++F++D G+T D+++A+ + ++ + ++ VNK ++ K
Sbjct: 260 EVVMFVIDALDGVTEQDQKLANRIIED--GRACVIVVNKWDAIEK 302
>sp|P74120|DER_SYNY3 GTPase Der OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=der
PE=3 SV=1
Length = 452
Score = 268 bits (684), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/313 (49%), Positives = 197/313 (62%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGNQQAIVHDQPGITRDRTYRPAFWRDRDFQVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +P I QA A+ E+ IF+VDG
Sbjct: 63 FNDDS----------------EFLP-------------EIREQANLALAEAKAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G TA+DEEIA WLR+ + +ILAVNKCESP +G +Q +EFW LG P P+SAI G
Sbjct: 94 QQGPTASDEEIAQWLRQQSVP--VILAVNKCESPDQGAIQAAEFWHLGLGEPYPMSAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG+LLD + L + E+ E+E + +AIVGRPNVGKSS+LNAL GE R IVSP
Sbjct: 152 SGTGDLLDALLEYLPAPQ--EEPEEDEIK---VAIVGRPNVGKSSLLNALTGEQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAID GQK+RLIDTAGIR++ + E +NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDM-VVERNGQKYRLIDTAGIRRKKNVDYGA---EFFGINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
V++ + +TEQ
Sbjct: 263 LFVLDVLDGVTEQ 275
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 29/167 (17%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE +VAIVGRPNVGKS+L N L G RAIV G TRD + ++ L+DT
Sbjct: 172 PEEDEIKVAIVGRPNVGKSSLLNALTGEQRAIVSPISGTTRDAIDMVVERNGQKYRLIDT 231
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + N+ G E + +A AI + V++F
Sbjct: 232 AGI----RRKKNV--------DYGAEFFGI---------------NRAFKAIRRADVVLF 264
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE 325
++D G+T D ++A + ++ + ++L +NK ++ K + E
Sbjct: 265 VLDVLDGVTEQDLKLAGRIIED--GRAVVLVINKWDAVEKDSYTIYE 309
>sp|B1X0B0|DER_CYAA5 GTPase Der OS=Cyanothece sp. (strain ATCC 51142) GN=der PE=3 SV=1
Length = 452
Score = 266 bits (680), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/313 (49%), Positives = 199/313 (63%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL +AIV D+PG+TRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAKDRQAIVHDQPGITRDRTYRPAFWCDRDFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAMAALTEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G TA D EI+DWLR+ + ++LAVNKCESP G++Q +EFW LG P PIS I G
Sbjct: 94 QLGPTAGDREISDWLRRQKVP--VLLAVNKCESPEMGLIQAAEFWELGLGEPYPISGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD + + L + D EE N ++I+GRPNVGKSS+LNA +GE R IVSP
Sbjct: 152 SGTGELLDQLITYLPSPDELPDR-EEIN----VSIIGRPNVGKSSLLNAFLGEQRAIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT + +RLIDTAGIR++ + E S+NRAF+AIRR+DVV
Sbjct: 207 ISGTTRDAIDTVVERGD-NTYRLIDTAGIRRKKNVNYGA---EFFSINRAFKAIRRADVV 262
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 263 LLVIDAIDGVTDQ 275
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 29/161 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+I+GRPNVGKS+L N +G RAIV G TRD + G++ + L+DT G+
Sbjct: 179 VSIIGRPNVGKSSLLNAFLGEQRAIVSPISGTTRDAIDTVVERGDNTYRLIDTAGI---- 234
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + N+ G E + +A AI + V++ ++D G
Sbjct: 235 RRKKNV--------NYGAEFFSI---------------NRAFKAIRRADVVLLVIDAIDG 271
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+T D ++AD R + I+ VNK ++ K + ++
Sbjct: 272 VTDQDIKLAD--RIIDEGRAAIIVVNKWDAVEKDSYTIYDY 310
>sp|B0C1P2|DER_ACAM1 GTPase Der OS=Acaryochloris marina (strain MBIC 11017) GN=der PE=3
SV=1
Length = 453
Score = 262 bits (669), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/313 (48%), Positives = 191/313 (61%), Gaps = 41/313 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NRL G AIV D PGVTRDR Y + W +F LVDTGG+
Sbjct: 3 LPIVAIVGRPNVGKSTLVNRLTGMMDAIVHDSPGVTRDRTYRPALWNGRDFSLVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +P I +Q A+ E+ V++ +VDG
Sbjct: 62 --------VFDDQT-------EFLPF-------------IRQQVMIALAEATVVVMVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
QAG T AD EIA WLR+ D ++LAVNKCESP +GI Q ++FW L PLP+S I G
Sbjct: 94 QAGPTPADHEIAHWLRQQ--DTPVLLAVNKCESPEQGITQAAQFWELSLDEPLPVSGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG+LLD V + +ED E + +A+VGRPNVGKSS+LNA VGE+R+IVSP
Sbjct: 152 NGTGDLLDQVVEYFSETPESEDEPEIK-----VALVGRPNVGKSSLLNAFVGENRSIVSP 206
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRD ID E Q +R IDTAGIR++ ++ E +NRAF+AIRRS VV
Sbjct: 207 ISGTTRDTIDMVVRRGE-QTYRFIDTAGIRRKKNVSYG---PEFFGINRAFKAIRRSQVV 262
Query: 462 ALVIEAMACITEQ 474
VI+A+ +TEQ
Sbjct: 263 LFVIDALDGVTEQ 275
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 40/205 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA+VGRPNVGKS+L N VG NR+IV G TRD + GE + +DT G+
Sbjct: 178 KVALVGRPNVGKSSLLNAFVGENRSIVSPISGTTRDTIDMVVRRGEQTYRFIDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R+ V+ P +A AI S V++F++D
Sbjct: 235 -------------------------RRKKNVSYGPEFFGINRAFKAIRRSQVVLFVIDAL 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP----L 334
G+T D+++A + + + +L VNK ++ K ++EF L F +
Sbjct: 270 DGVTEQDQKLAGRIIDD--GRACVLVVNKWDAVTKDTYTINEFSKQIRSRLNFMEWAEMI 327
Query: 335 PISAISGTGTGELLDLVCSELKKVE 359
+SA +G ++L+LV + ++ E
Sbjct: 328 FVSAQTGQRVEKILNLVDTAARQFE 352
>sp|Q5N167|DER_SYNP6 GTPase Der OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 /
SAUG 1402/1) GN=der PE=3 SV=1
Length = 453
Score = 261 bits (666), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 158/313 (50%), Positives = 205/313 (65%), Gaps = 40/313 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAILGRPNVGKSTLVNRLAGSREAIVHDEPGVTRDRTYQEAFWCDRDFTVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA A+ E+ + + +VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAELALAEAALAVLVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAGLTAAD EIADWLR + ++ I++AVNKCESP KG Q +EFWSLGF PLPIS+I G
Sbjct: 94 QAGLTAADNEIADWLR--HQNRPIVVAVNKCESPDKGAAQAAEFWSLGFGEPLPISSIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD V L+ + ++ +E I +AIVGRPNVGKSS+LN+ +GE R IVSP
Sbjct: 152 SGTGELLDRV---LELLPPADEAAGDETEI-GVAIVGRPNVGKSSLLNSFLGEQRAIVSP 207
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDAIDT + Q++RL+DTAGIR++ + E +NR+F+AIRR+DV
Sbjct: 208 IAGTTRDAIDTVIERND-QRYRLVDTAGIRRKRGVDYG---PEFFGINRSFKAIRRADVC 263
Query: 462 ALVIEAMACITEQ 474
LVI+ + +T+Q
Sbjct: 264 LLVIDVLDGVTDQ 276
>sp|Q31KP9|DER_SYNE7 GTPase Der OS=Synechococcus elongatus (strain PCC 7942) GN=der PE=3
SV=1
Length = 453
Score = 261 bits (666), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 158/313 (50%), Positives = 205/313 (65%), Gaps = 40/313 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAILGRPNVGKSTLVNRLAGSREAIVHDEPGVTRDRTYQEAFWCDRDFTVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA A+ E+ + + +VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAELALAEAALAVLVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAGLTAAD EIADWLR + ++ I++AVNKCESP KG Q +EFWSLGF PLPIS+I G
Sbjct: 94 QAGLTAADNEIADWLR--HQNRPIVVAVNKCESPDKGAAQAAEFWSLGFGEPLPISSIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTGELLD V L+ + ++ +E I +AIVGRPNVGKSS+LN+ +GE R IVSP
Sbjct: 152 SGTGELLDRV---LELLPPADEAAGDETEI-GVAIVGRPNVGKSSLLNSFLGEQRAIVSP 207
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDAIDT + Q++RL+DTAGIR++ + E +NR+F+AIRR+DV
Sbjct: 208 IAGTTRDAIDTVIERND-QRYRLVDTAGIRRKRGVDYG---PEFFGINRSFKAIRRADVC 263
Query: 462 ALVIEAMACITEQ 474
LVI+ + +T+Q
Sbjct: 264 LLVIDVLDGVTDQ 276
>sp|A5GR60|DER_SYNR3 GTPase Der OS=Synechococcus sp. (strain RCC307) GN=der PE=3 SV=1
Length = 452
Score = 259 bits (663), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/316 (49%), Positives = 191/316 (60%), Gaps = 47/316 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y FWG F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLCRSRDAIVHDEPGVTRDRTYQEGFWGGRTFRVVDTGGLV 62
Query: 223 --NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ S+ P I E QA+ A+ E+CV + +V
Sbjct: 63 FDDDSEFLPEIRE-------------------------------QASLAMAEACVALVIV 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ GLTAADE IA WLR+ ++L VNKCESP +G+ +EFW+LG P PISAI
Sbjct: 92 DGQQGLTAADEAIAAWLRQQKCP--VLLGVNKCESPEQGLAMAAEFWALGLGEPKPISAI 149
Query: 340 SGTGTGELLDLVCSELKKVEGTEDLVEEENRIP-AIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG+LLD V L + EEE P +AIVGRPNVGKSS+LN + GE+R I
Sbjct: 150 HGAGTGDLLDQVLDFLPPQD------EEEAPEPIQMAIVGRPNVGKSSLLNTVCGENRAI 203
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VSPI GTTRD IDT EGQ ++L+DTAGIR+R ++ E +NR+F+AI RS
Sbjct: 204 VSPIRGTTRDTIDTSIE-REGQSWKLLDTAGIRRRRSVNYG---PEFFGINRSFKAIERS 259
Query: 459 DVVALVIEAMACITEQ 474
DV LVI+A +TEQ
Sbjct: 260 DVCVLVIDAEEGVTEQ 275
>sp|Q7VDI8|DER_PROMA GTPase Der OS=Prochlorococcus marinus (strain SARG / CCMP1375 /
SS120) GN=der PE=3 SV=1
Length = 456
Score = 258 bits (660), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 153/314 (48%), Positives = 190/314 (60%), Gaps = 44/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y FWG+ EF LVDTGG++
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLCQSREAIVHDQPGVTRDRSYQDGFWGDREFKLVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+++ P I E QA A+ E+ + + +VD
Sbjct: 64 DDETEFLPEIRE-------------------------------QANLALSEASIALLIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ GLTAADE IA WLR + + I+LAVNKCES G+ EFW LG P P+SAI
Sbjct: 93 GQQGLTAADEVIAAWLRHSKCE--ILLAVNKCESVELGLSMAGEFWRLGLGEPYPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTGELLD + S L E L+++E +AIVGRPNVGKSS+LNA+ GE R IVS
Sbjct: 151 GAGTGELLDRLISILPPKE----LIKDEEEPIQVAIVGRPNVGKSSLLNAICGEKRAIVS 206
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
I GTTRD IDT EG+ ++LIDTAGIR+R ++ E +NR+F+AI RSDV
Sbjct: 207 AIRGTTRDTIDTSIV-REGKLWKLIDTAGIRRRKSVNYG---PEFFGINRSFKAIERSDV 262
Query: 461 VALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 263 CVLVIDALDGVTEQ 276
>sp|Q3AI13|DER_SYNSC GTPase Der OS=Synechococcus sp. (strain CC9605) GN=der PE=3 SV=1
Length = 455
Score = 258 bits (660), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 157/316 (49%), Positives = 194/316 (61%), Gaps = 48/316 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA A+EE+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALEEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ GLTAADE IA++LR + +LAVNKCESP +G+ EFWSLG P PISAI
Sbjct: 93 GQQGLTAADESIAEFLRSHRCP--TLLAVNKCESPEQGLAMAGEFWSLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTGELLD V + L K EG +EE I +AI+GRPNVGKSS+LNA+ GE R I
Sbjct: 151 GAGTGELLDQVLTFLPPKDQEG-----DEEEPI-QMAIIGRPNVGKSSLLNAICGEQRAI 204
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VSPI GTTRD IDT E + +RL+DTAGIR+R ++ E +NR+F+AI RS
Sbjct: 205 VSPIRGTTRDTIDTSII-RENRPWRLVDTAGIRRRRSVNYG---PEFFGINRSFKAIERS 260
Query: 459 DVVALVIEAMACITEQ 474
DV LVI+A+ +TEQ
Sbjct: 261 DVCVLVIDALDGVTEQ 276
>sp|Q7U8G2|DER_SYNPX GTPase Der OS=Synechococcus sp. (strain WH8102) GN=der PE=3 SV=1
Length = 455
Score = 256 bits (655), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 156/316 (49%), Positives = 194/316 (61%), Gaps = 48/316 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDEPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA A+EE+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALAMEEASVAVVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TAADE IA++LR +LAVNKCESP +G+ +EFWSLG P PISAI
Sbjct: 93 GQQGITAADESIAEFLRSRPCP--TLLAVNKCESPEQGLAMAAEFWSLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GTG+LLD V + L K EG +EE I +AI+GRPNVGKSS+LNA+ GE R I
Sbjct: 151 GVGTGDLLDQVLTFLPPKDQEG-----DEEEPI-QMAIIGRPNVGKSSLLNAICGEQRAI 204
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VSPI GTTRD IDT E + +RL+DTAGIR+R ++ E +NR+F+AI RS
Sbjct: 205 VSPIRGTTRDTIDTNIV-RENRPWRLVDTAGIRRRRSVNYG---PEYFGINRSFKAIDRS 260
Query: 459 DVVALVIEAMACITEQ 474
DV LVI+A+ +TEQ
Sbjct: 261 DVCVLVIDALDGVTEQ 276
>sp|Q7V8X0|DER_PROMM GTPase Der OS=Prochlorococcus marinus (strain MIT 9313) GN=der PE=3
SV=1
Length = 455
Score = 256 bits (653), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 153/314 (48%), Positives = 187/314 (59%), Gaps = 44/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y FWG+ EF +VDTGG++
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLCRSREAIVDDKPGVTRDRTYQDGFWGDREFKVVDTGGLVF 63
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA A+ E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QANLALAEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TAADE IA+WLR + AVNKCESP +G+ +EFW LG P PISAI
Sbjct: 93 GQQGVTAADESIAEWLRTQPCPTLV--AVNKCESPDQGLAMAAEFWRLGLGEPFPISAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG+LLD V S L EE+ +AI+GRPNVGKSS+LNA+ GE R IVS
Sbjct: 151 GAGTGDLLDRVLSLLPPKHEE----PEEDEPIQMAIIGRPNVGKSSLLNAICGEPRAIVS 206
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI GTTRD IDT EG +RLIDTAGIR+R ++ E +NR+F+AI RSDV
Sbjct: 207 PIRGTTRDTIDTRLE-REGHPWRLIDTAGIRRRRSVNYG---PEFFGINRSFKAIERSDV 262
Query: 461 VALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 263 CVLVIDALDGVTEQ 276
>sp|Q0ICK8|DER_SYNS3 GTPase Der OS=Synechococcus sp. (strain CC9311) GN=der PE=3 SV=1
Length = 455
Score = 255 bits (651), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 152/314 (48%), Positives = 191/314 (60%), Gaps = 44/314 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA+ A+ E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QASLALAEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ GLTAADE IA+WLR +LAVNKCESP +G+ +EFW LG P PISAI
Sbjct: 93 GQQGLTAADESIAEWLRTQNCK--TLLAVNKCESPEQGLGMAAEFWRLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GT ELLD V + L + D EE I ++I+GRPNVGKSS+LN++ GE R IVS
Sbjct: 151 GAGTAELLDQVLTFLPPKDEESD---EEEPI-QLSIIGRPNVGKSSLLNSICGETRAIVS 206
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI GTTRD IDT E +++RLIDTAGIR+R ++ E +NR+F+AI RSDV
Sbjct: 207 PIRGTTRDTIDTRIE-RENRRWRLIDTAGIRRRRSVNYG---PEFFGINRSFKAIERSDV 262
Query: 461 VALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 263 CVLVIDALDGVTEQ 276
>sp|Q2JV46|DER_SYNJA GTPase Der OS=Synechococcus sp. (strain JA-3-3Ab) GN=der PE=3 SV=1
Length = 459
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/313 (48%), Positives = 200/313 (63%), Gaps = 39/313 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS+L NRL G AIV DEPG+TRDR+Y W +VDTGG++
Sbjct: 3 LPLVAVVGRPNVGKSSLVNRLAGVRSAIVHDEPGITRDRLYQEVEWNGRRLRVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +P I +QA AA+ E+ +IF+VDG
Sbjct: 63 FGDDS----------------EFLP-------------HIRQQAMAAMAEAHAVIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ GLT AD+E+ADWLR+ + +++AVNKCES + G+ Q + FW LG P+P SA+ G
Sbjct: 94 REGLTPADKELADWLRRQPLP--VVVAVNKCESGQLGLAQAAAFWELGLGEPIPCSAVHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G ELL+ V L +V ++ +E + I A+AIVGRPNVGKSS+LN LVG +R IVSP
Sbjct: 152 NGVAELLEAVLPHLPEV--AQEAADEPDPI-AVAIVGRPNVGKSSLLNRLVGSERAIVSP 208
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
I+GTTRDA+DT EGQ +RLIDTAGIR+++ + E S+NRAF+AI+RSDVV
Sbjct: 209 IAGTTRDAVDT-LVEWEGQSYRLIDTAGIRRKSRVEYG---VEFFSINRAFKAIQRSDVV 264
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 265 LLVIDALEGVTEQ 277
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 39/193 (20%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS+L NRLVG RAIV G TRD + W + L+DT G+ S
Sbjct: 181 VAIVGRPNVGKSSLLNRLVGSERAIVSPIAGTTRDAVDTLVEWEGQSYRLIDTAGIRRKS 240
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + G+E + +A AI+ S V++ ++D G
Sbjct: 241 RVE------------YGVEFFSI---------------NRAFKAIQRSDVVLLVIDALEG 273
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSEF--------WSLGFSPLP- 335
+T D+ +A R + I+ VNK ++ K ++E+ + + ++PL
Sbjct: 274 VTEQDQRLAG--RIEEEGRACIIVVNKWDAVENKDTHTINEYTREIRERLYFIDWAPLLF 331
Query: 336 ISAISGTGTGELL 348
+SA++G T ++
Sbjct: 332 VSALTGQRTHKIF 344
>sp|A5GJ79|DER_SYNPW GTPase Der OS=Synechococcus sp. (strain WH7803) GN=der PE=3 SV=1
Length = 455
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/317 (47%), Positives = 194/317 (61%), Gaps = 50/317 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y +WG+ +F +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCHSREAIVHDEPGVTRDRTYQDGYWGDRDFKVVDTGGLVF 63
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA A+EE+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALEEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TA+DE IA++LR +LAVNKCESP +G+ +EFWSLG P PISAI
Sbjct: 93 GQQGVTASDEAIAEFLRGQRCPA--LLAVNKCESPEQGLAMAAEFWSLGLGEPYPISAIH 150
Query: 341 GTGTGELLDLVCSEL--KKVEG-TEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRT 397
G GT ELLD V + L K EG +E+ ++ +AI+GRPNVGKSS+LNA+ GE R
Sbjct: 151 GAGTAELLDQVLTYLPPKSEEGDSEEPIQ-------LAIIGRPNVGKSSLLNAICGEQRA 203
Query: 398 IVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRR 457
IVSPI GTTRD IDT E + +RL+DTAGIR+R ++ E +NR+F+AI R
Sbjct: 204 IVSPIRGTTRDTIDTSLV-RENRPWRLVDTAGIRRRRSVNYG---PEFFGINRSFKAIER 259
Query: 458 SDVVALVIEAMACITEQ 474
SDV LVI+A+ +TEQ
Sbjct: 260 SDVCVLVIDALDGVTEQ 276
>sp|Q2JM09|DER_SYNJB GTPase Der OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=der
PE=3 SV=1
Length = 459
Score = 249 bits (636), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 157/313 (50%), Positives = 196/313 (62%), Gaps = 39/313 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NR+ G AIV DEPGVTRDR+Y W +VDTGG++
Sbjct: 3 LPLVAIVGRPNVGKSTLVNRMAGVRSAIVHDEPGVTRDRLYQEVEWNGRRLRVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +P I +QA AA+ E+ +IF+VDG
Sbjct: 63 FGDDS----------------EFLP-------------HIRQQAMAAMAEAQAVIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ GLT AD E+ADWLRK + +++AVNKCES + G+ Q + FW LG P+P S I G
Sbjct: 94 REGLTPADVEVADWLRKQPLP--VVVAVNKCESGQMGLAQAAAFWELGLGDPIPCSGIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
G ELL+ V + L +V T + E + I A++IVGRPNVGKSS+LN LVG +R IVSP
Sbjct: 152 NGVAELLEAVLAHLPEV--TAEAAGEPDPI-AVSIVGRPNVGKSSLLNRLVGSERAIVSP 208
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTTRDAIDT T EGQ +RLIDTAGIRK+ + E S+NRAF+AI+RSD V
Sbjct: 209 ISGTTRDAIDTVVTW-EGQPYRLIDTAGIRKKNRVQYG---IEFFSINRAFKAIQRSDAV 264
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +TEQ
Sbjct: 265 LLVIDALEGVTEQ 277
>sp|Q3AZ65|DER_SYNS9 GTPase Der OS=Synechococcus sp. (strain CC9902) GN=der PE=3 SV=1
Length = 455
Score = 249 bits (635), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 151/316 (47%), Positives = 193/316 (61%), Gaps = 48/316 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA A++E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALDEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GLTAADE IA++LR+ +LAVNKCES +G+ +EFWSLG P PISAI
Sbjct: 93 GKQGLTAADESIAEFLRQQRCP--TLLAVNKCESVEQGLAMAAEFWSLGLGEPYPISAIH 150
Query: 341 GTGTGELLDLVCSEL--KKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTI 398
G GT E+LD V + L K EG +EE I ++I+GRPNVGKSS+LNA+ GE R I
Sbjct: 151 GAGTAEVLDQVLTFLPPKDQEG-----DEEEPI-QMSIIGRPNVGKSSLLNAICGEQRAI 204
Query: 399 VSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRS 458
VSPI GTTRD IDT E + +RL+DTAGIR+R ++ E +NR+F+AI RS
Sbjct: 205 VSPIRGTTRDTIDTNIV-RENRPWRLVDTAGIRRRRSVNYG---PEYFGINRSFKAIERS 260
Query: 459 DVVALVIEAMACITEQ 474
DV LVI+A+ +TEQ
Sbjct: 261 DVCVLVIDALDGVTEQ 276
>sp|A2BV51|DER_PROM5 GTPase Der OS=Prochlorococcus marinus (strain MIT 9515) GN=der PE=3
SV=1
Length = 458
Score = 248 bits (634), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 147/313 (46%), Positives = 191/313 (61%), Gaps = 40/313 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 3 LPSIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ ED + E +P I Q A+EE+ + +F+VDG
Sbjct: 62 --------VFEDDS-------EFLP-------------EIRTQVFLALEEASIALFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+T D IA WLR + D I+AVNKCES GI SEFW LG P P+SAI G
Sbjct: 94 NQGVTTGDLSIAKWLRNS--DCKTIVAVNKCESLSLGISMASEFWKLGLGEPYPVSAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG+LLDLV EL K ED +E+++ ++I+GRPNVGKSS+LNA+ GE R IVS
Sbjct: 152 SGTGDLLDLVIDELPKDFDVED---KEDKV-MMSIIGRPNVGKSSLLNAICGEKRAIVSD 207
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTT D+IDT ++++DTAGIR++ + TE +NRAF++I RSDV
Sbjct: 208 ISGTTTDSIDT-LIKKNSHLWKIVDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDVC 263
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 264 VLVIDAIDGVTDQ 276
>sp|Q31CE7|DER_PROM9 GTPase Der OS=Prochlorococcus marinus (strain MIT 9312) GN=der PE=3
SV=1
Length = 457
Score = 243 bits (619), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 190/314 (60%), Gaps = 41/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------EIRAQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCKT--IIAVNKCESTTLGISLASEFWKLGLGEPYPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G+GTG+LLDLV EL E+ ++EE ++I+GRPNVGKSS+LN++ GE R IVS
Sbjct: 151 GSGTGDLLDLVIGEL-----PENNIQEEEEKIMMSIIGRPNVGKSSLLNSISGEKRAIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
ISGTT D+IDT + Q ++++DTAGIR++ + TE +NRAF++I RSDV
Sbjct: 206 DISGTTTDSIDTLIKKGDTQ-WKIVDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDV 261
Query: 461 VALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 262 CVLVIDAIDGVTDQ 275
>sp|Q7V2S6|DER_PROMP GTPase Der OS=Prochlorococcus marinus subsp. pastoris (strain
CCMP1986 / MED4) GN=der PE=3 SV=1
Length = 458
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/313 (45%), Positives = 188/313 (60%), Gaps = 40/313 (12%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + W EF +VDTGG+
Sbjct: 3 LPSIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWAGREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ ED + E +P I Q A+EE+ + +F+VDG
Sbjct: 62 --------VFEDDS-------EFLP-------------EIRTQVFLALEEASLALFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+T D IA WLR + I+AVNKCES G+ SEFW LG P P+SAI G
Sbjct: 94 NQGVTDGDLSIAKWLRNSACK--TIVAVNKCESTSLGVSLASEFWKLGLGEPYPVSAIHG 151
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
+GTG+LLDLV K ED +E++I ++I+GRPNVGKSS+LNA+ GE R IVS
Sbjct: 152 SGTGDLLDLVIDGFPKDLNVED---KEDKI-MMSIIGRPNVGKSSLLNAICGEKRAIVSD 207
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
ISGTT D+IDT + ++++DTAGIR++ + TE +NRAF++I RSDV
Sbjct: 208 ISGTTTDSIDT-LIKKDSHLWKIVDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDVC 263
Query: 462 ALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 264 VLVIDAIDGVTDQ 276
>sp|Q1WTQ4|DER_LACS1 GTPase Der OS=Lactobacillus salivarius (strain UCC118) GN=der PE=3
SV=1
Length = 436
Score = 239 bits (610), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 188/312 (60%), Gaps = 42/312 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNRL G +IV D PGVTRDR+Y R+ W H F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRLAGERISIVEDTPGVTRDRIYARTEWLGHPFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I QA AIEE+ VIIF+V +
Sbjct: 62 ----------------DIGDE--PFLTQ----------ITEQAEIAIEEADVIIFVVSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
G+T ADE++A L + DK ++LAVNK ++P + +F+SLGF P+P++ G
Sbjct: 94 EGVTDADEKVARILYRT--DKPVVLAVNKVDNPELR-ADIYDFYSLGFGEPIPVAGTHGI 150
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG+LLD + E K D EE+ + +GRPNVGKSS++NA++GE+R IVS I
Sbjct: 151 GTGDLLDKIIKEFPK-----DATNEEDDSIKFSFIGRPNVGKSSLVNAILGENRVIVSNI 205
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRDAIDT F +G K+ +IDTAGIRK+ + + TE SV RA RAI RSDVV
Sbjct: 206 EGTTRDAIDTRFETEDGTKYTMIDTAGIRKKGKVYEN---TEKYSVLRAMRAIDRSDVVC 262
Query: 463 LVIEAMACITEQ 474
+V+ A I EQ
Sbjct: 263 VVLNAEEGIREQ 274
>sp|A2BPL9|DER_PROMS GTPase Der OS=Prochlorococcus marinus (strain AS9601) GN=der PE=3
SV=1
Length = 457
Score = 239 bits (609), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 188/314 (59%), Gaps = 41/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +S E +P I Q A+EE+ + + +VD
Sbjct: 62 VFDDES----------------EFLP-------------EIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCKT--IVAVNKCESTTLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G+GTG+LLDLV EL E+ ++++ ++I+GRPNVGKSS+LN++ GE R IVS
Sbjct: 151 GSGTGDLLDLVIGEL-----PENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKRAIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
ISGTT D+IDT + +++IDTAGIR++ + TE +NRAF++I RSDV
Sbjct: 206 DISGTTTDSIDTLIKKGD-NNWKIIDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDV 261
Query: 461 VALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 262 CVLVIDAVDGVTDQ 275
>sp|A3PBA9|DER_PROM0 GTPase Der OS=Prochlorococcus marinus (strain MIT 9301) GN=der PE=3
SV=1
Length = 457
Score = 238 bits (608), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 189/314 (60%), Gaps = 41/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------EIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCKT--IVAVNKCESTTLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G+GTG+LLDLV EL E+ ++++ ++I+GRPNVGKSS+LN++ GE R IVS
Sbjct: 151 GSGTGDLLDLVIGEL-----PENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKRAIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
ISGTT D+IDT + +++IDTAGIR++ + TE +NRAF++I RSDV
Sbjct: 206 DISGTTTDSIDTLIKKGDNH-WKIIDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDV 261
Query: 461 VALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 262 CVLVIDAIDGVTDQ 275
>sp|A8G3A3|DER_PROM2 GTPase Der OS=Prochlorococcus marinus (strain MIT 9215) GN=der PE=3
SV=1
Length = 457
Score = 237 bits (605), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/314 (45%), Positives = 191/314 (60%), Gaps = 41/314 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------EIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCKT--IVAVNKCESTTLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G+GTG+LLDLV EL + ++ ++E +I ++I+GRPNVGKSS+LN++ GE R IVS
Sbjct: 151 GSGTGDLLDLVIGELPE----NNIRDDEEKI-MMSIIGRPNVGKSSLLNSICGEKRAIVS 205
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
ISGTT D+IDT + +++IDTAGIR++ + TE +NRAF++I RSDV
Sbjct: 206 DISGTTTDSIDTLIKKGDNY-WKIIDTAGIRRKKNVKYG---TEFFGINRAFKSIDRSDV 261
Query: 461 VALVIEAMACITEQ 474
LVI+A+ +T+Q
Sbjct: 262 CVLVIDAVDGVTDQ 275
>sp|B9LBT6|DER_CHLSY GTPase Der OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637
/ Y-400-fl) GN=der PE=3 SV=1
Length = 449
Score = 237 bits (605), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 185/312 (59%), Gaps = 35/312 (11%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS FNRL+G RAIV D PG TRDR+YG +FW EF +VDT GVL
Sbjct: 4 PIVAIVGRPNVGKSTFFNRLIGERRAIVEDLPGTTRDRLYGDTFWNGREFTVVDTAGVL- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
PN+ EA +AR QA AI E+ IIF+VDG+
Sbjct: 63 FGGEDPNLP-------------------EAEIARRTRA---QAEHAIAEADAIIFIVDGR 100
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD ++AD LR K ++LAVNKC+S + ++ EF++L P+P+SA G
Sbjct: 101 DGLTAADSDVADVLRTT--SKPVVLAVNKCDSQER-MLDAVEFYALNLGEPIPMSAFHGL 157
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG++LD + L + +EE R IAIVGRPNVGKSS+LN L+G++R++VS I
Sbjct: 158 GTGDVLDRLTEYLPP----KTFTQEEERHLRIAIVGRPNVGKSSLLNRLLGQERSVVSSI 213
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD IDT T G+ LIDTAGIR+ I E SV R RAI R DV
Sbjct: 214 PGTTRDPIDTTITY-HGEPITLIDTAGIRRAGKIERG---IEKYSVLRTLRAIERCDVAL 269
Query: 463 LVIEAMACITEQ 474
L+I+A +T Q
Sbjct: 270 LLIDATEGVTAQ 281
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 99/221 (44%), Gaps = 49/221 (22%)
Query: 161 HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG 220
HL R+AIVGRPNVGKS+L NRL+G R++V PG TRD + + L+DT G
Sbjct: 182 HL--RIAIVGRPNVGKSSLLNRLLGQERSVVSSIPGTTRDPIDTTITYHGEPITLIDTAG 239
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ K + I E ++ T+ AIE V + L+
Sbjct: 240 IRRAGKIERGI-EKYSVLRTL--------------------------RAIERCDVALLLI 272
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIM-------QVSE-FWSLGFS 332
D G+TA D IA + + K +IL VNK ++ K QV E F + ++
Sbjct: 273 DATEGVTAQDTHIAGMVVE--AKKGLILVVNKWDAIEKDSHTYYAFQDQVREAFKFVDYA 330
Query: 333 PLP-ISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIP 372
P+ +SA++G LLD E V+ + R+P
Sbjct: 331 PIVFVSALTGQRVSHLLDY---------AREVYVQRQKRVP 362
>sp|A9WHH9|DER_CHLAA GTPase Der OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635
/ J-10-fl) GN=der PE=3 SV=1
Length = 449
Score = 237 bits (605), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 185/312 (59%), Gaps = 35/312 (11%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS FNRL+G RAIV D PG TRDR+YG +FW EF +VDT GVL
Sbjct: 4 PIVAIVGRPNVGKSTFFNRLIGERRAIVEDLPGTTRDRLYGDTFWNGREFTVVDTAGVL- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
PN+ EA +AR QA AI E+ IIF+VDG+
Sbjct: 63 FGGEDPNLP-------------------EAEIARRTRA---QAEHAIAEADAIIFIVDGR 100
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD ++AD LR K ++LAVNKC+S + ++ EF++L P+P+SA G
Sbjct: 101 DGLTAADSDVADVLRTT--SKPVVLAVNKCDSQER-MLDAVEFYALNLGEPIPMSAFHGL 157
Query: 343 GTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
GTG++LD + L + +EE R IAIVGRPNVGKSS+LN L+G++R++VS I
Sbjct: 158 GTGDVLDRLTEYLPP----KTFTQEEERHLRIAIVGRPNVGKSSLLNRLLGQERSVVSSI 213
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
GTTRD IDT T G+ LIDTAGIR+ I E SV R RAI R DV
Sbjct: 214 PGTTRDPIDTTITY-HGEPITLIDTAGIRRAGKIERG---IEKYSVLRTLRAIERCDVAL 269
Query: 463 LVIEAMACITEQ 474
L+I+A +T Q
Sbjct: 270 LLIDATEGVTAQ 281
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 99/221 (44%), Gaps = 49/221 (22%)
Query: 161 HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG 220
HL R+AIVGRPNVGKS+L NRL+G R++V PG TRD + + L+DT G
Sbjct: 182 HL--RIAIVGRPNVGKSSLLNRLLGQERSVVSSIPGTTRDPIDTTITYHGEPITLIDTAG 239
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ K + I E ++ T+ AIE V + L+
Sbjct: 240 IRRAGKIERGI-EKYSVLRTL--------------------------RAIERCDVALLLI 272
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIM-------QVSE-FWSLGFS 332
D G+TA D IA + + K +IL VNK ++ K QV E F + ++
Sbjct: 273 DATEGVTAQDTHIAGMVVE--AKKGLILVVNKWDAIEKDSHTYYAFQDQVREAFKFVDYA 330
Query: 333 PLP-ISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIP 372
P+ +SA++G LLD E V+ + R+P
Sbjct: 331 PIVFVSALTGQRVSHLLDY---------AREVYVQRQKRVP 362
>sp|Q030L6|DER_LACLS GTPase Der OS=Lactococcus lactis subsp. cremoris (strain SK11)
GN=der PE=3 SV=1
Length = 436
Score = 236 bits (602), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F ++DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLTRKFNIIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T I QA A+ E+ VII +VDG
Sbjct: 61 ------------------IELSDEPFMTE----------IRAQAEIAMTEADVIIAVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A+ L + DK +IL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADEAVANILYRT--DKPVILIVNKVDNPERR-MEIFDFYSLGLGDPYPVSAVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENR-IPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L + +EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAIVQNLP------NEIEEENEDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI+GTTRDAIDT F E Q+F +IDTAG+RK I + TE SV RA RAI RSD+
Sbjct: 204 PIAGTTRDAIDTHFVDSEDQEFVMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDI 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>sp|A2RM49|DER_LACLM GTPase Der OS=Lactococcus lactis subsp. cremoris (strain MG1363)
GN=der PE=3 SV=1
Length = 436
Score = 236 bits (602), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F ++DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLTRKFNIIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T I QA A+ E+ VII +VDG
Sbjct: 61 ------------------IELSDEPFMTE----------IRAQAEIAMTEADVIIAVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A+ L + DK +IL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADEAVANILYRT--DKPVILIVNKVDNPERR-MEIFDFYSLGLGDPYPVSAVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENR-IPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + L + +EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAIVQNLP------NEIEEENEDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
PI+GTTRDAIDT F E Q+F +IDTAG+RK I + TE SV RA RAI RSD+
Sbjct: 204 PIAGTTRDAIDTHFVDSEDQEFVMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDI 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>sp|C1CSX0|DER_STRZT GTPase Der OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=der
PE=3 SV=1
Length = 436
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>sp|C1CM45|DER_STRZP GTPase Der OS=Streptococcus pneumoniae (strain P1031) GN=der PE=3
SV=1
Length = 436
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>sp|C1CFT0|DER_STRZJ GTPase Der OS=Streptococcus pneumoniae (strain JJA) GN=der PE=3
SV=1
Length = 436
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>sp|P64063|DER_STRR6 GTPase Der OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
GN=der PE=3 SV=1
Length = 436
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>sp|B2IRW4|DER_STRPS GTPase Der OS=Streptococcus pneumoniae (strain CGSP14) GN=der PE=3
SV=1
Length = 436
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>sp|P64062|DER_STRPN GTPase Der OS=Streptococcus pneumoniae serotype 4 (strain ATCC
BAA-334 / TIGR4) GN=der PE=3 SV=1
Length = 436
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>sp|B8ZMH4|DER_STRPJ GTPase Der OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain
23F-1) GN=der PE=3 SV=1
Length = 436
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>sp|B1I766|DER_STRPI GTPase Der OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=der
PE=3 SV=1
Length = 436
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>sp|C1C8U6|DER_STRP7 GTPase Der OS=Streptococcus pneumoniae (strain 70585) GN=der PE=3
SV=1
Length = 436
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>sp|B5E756|DER_STRP4 GTPase Der OS=Streptococcus pneumoniae serotype 19F (strain G54)
GN=der PE=3 SV=1
Length = 436
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>sp|Q04J64|DER_STRP2 GTPase Der OS=Streptococcus pneumoniae serotype 2 (strain D39 /
NCTC 7466) GN=der PE=3 SV=1
Length = 436
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 44/313 (14%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
GTG++LD + VE + EEEN + +++GRPNVGKSS++NA++GEDR I S
Sbjct: 150 IGTGDVLDAI------VENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK + + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
>sp|A4VX53|DER_STRSY GTPase Der OS=Streptococcus suis (strain 05ZYH33) GN=der PE=3 SV=1
Length = 436
Score = 234 bits (598), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 185/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L K +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSRILYKT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E EE I +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIIENLPAQEA-----EENPDIIKFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT PEGQ+F +IDTAG+RK + + TE SV RA RAI RSDV+
Sbjct: 205 VAGTTRDAIDTHFTDPEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIERSDVI 261
Query: 462 ALVIEAMACITE 473
+VI A I E
Sbjct: 262 LMVINAEEGIRE 273
>sp|A4W3F7|DER_STRS2 GTPase Der OS=Streptococcus suis (strain 98HAH33) GN=der PE=3 SV=1
Length = 436
Score = 234 bits (598), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 185/312 (59%), Gaps = 42/312 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L K +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSRILYKT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
GTG++LD + L E EE I +++GRPNVGKSS++NA++GE+R I SP
Sbjct: 150 IGTGDVLDAIIENLPAQEA-----EENPDIIKFSLIGRPNVGKSSLINAILGEERVIASP 204
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
++GTTRDAIDT FT PEGQ+F +IDTAG+RK + + TE SV RA RAI RSDV+
Sbjct: 205 VAGTTRDAIDTHFTDPEGQEFTMIDTAGMRKSGKVYEN---TEKYSVMRAMRAIERSDVI 261
Query: 462 ALVIEAMACITE 473
+VI A I E
Sbjct: 262 LMVINAEEGIRE 273
>sp|Q1J8C9|DER_STRPF GTPase Der OS=Streptococcus pyogenes serotype M4 (strain MGAS10750)
GN=der PE=3 SV=1
Length = 436
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 186/313 (59%), Gaps = 42/313 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVS 400
G GTG++LD + L E EE + I +++GRPNVGKSS++NA++GEDR I S
Sbjct: 149 GIGTGDVLDAIVENLPVEEA-----EENDDIIRFSLIGRPNVGKSSLINAILGEDRVIAS 203
Query: 401 PISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDV 460
P++GTTRDAIDT FT +GQ+F +IDTAG+RK I + TE SV RA RAI RSDV
Sbjct: 204 PVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSGKIYEN---TEKYSVMRAMRAIDRSDV 260
Query: 461 VALVIEAMACITE 473
V +VI A I E
Sbjct: 261 VLMVINAEEGIRE 273
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 176,627,455
Number of Sequences: 539616
Number of extensions: 7930199
Number of successful extensions: 59368
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2014
Number of HSP's successfully gapped in prelim test: 755
Number of HSP's that attempted gapping in prelim test: 46461
Number of HSP's gapped (non-prelim): 7959
length of query: 484
length of database: 191,569,459
effective HSP length: 121
effective length of query: 363
effective length of database: 126,275,923
effective search space: 45838160049
effective search space used: 45838160049
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)