Query 011501
Match_columns 484
No_of_seqs 409 out of 3843
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 09:26:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011501.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011501hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gwg_A 6-phosphogluconate dehy 100.0 6E-113 2E-117 895.7 45.0 475 1-483 2-478 (484)
2 2p4q_A 6-phosphogluconate dehy 100.0 2E-103 8E-108 830.2 45.8 470 4-483 11-491 (497)
3 2zyd_A 6-phosphogluconate dehy 100.0 5E-103 2E-107 825.9 47.8 467 1-477 13-480 (480)
4 2iz1_A 6-phosphogluconate dehy 100.0 2E-101 9E-106 813.5 48.4 468 1-478 3-473 (474)
5 2pgd_A 6-phosphogluconate dehy 100.0 1E-99 3E-104 802.9 45.6 471 4-483 3-476 (482)
6 1pgj_A 6PGDH, 6-PGDH, 6-phosph 100.0 4.7E-97 2E-101 780.8 46.9 463 4-477 2-476 (478)
7 4e21_A 6-phosphogluconate dehy 100.0 2E-52 6.8E-57 424.5 29.3 321 3-463 22-357 (358)
8 3obb_A Probable 3-hydroxyisobu 100.0 2.4E-47 8.2E-52 378.5 25.9 265 3-295 3-277 (300)
9 4gbj_A 6-phosphogluconate dehy 100.0 1.8E-45 6.2E-50 365.0 21.0 263 4-295 6-272 (297)
10 3doj_A AT3G25530, dehydrogenas 100.0 4.6E-38 1.6E-42 314.1 26.6 264 3-295 21-288 (310)
11 4dll_A 2-hydroxy-3-oxopropiona 100.0 3.7E-38 1.3E-42 316.2 25.4 263 3-295 31-296 (320)
12 3qha_A Putative oxidoreductase 100.0 5.8E-38 2E-42 311.4 25.2 260 3-295 15-286 (296)
13 3pef_A 6-phosphogluconate dehy 100.0 1.3E-37 4.5E-42 307.4 26.0 262 4-294 2-267 (287)
14 3pdu_A 3-hydroxyisobutyrate de 100.0 9.6E-38 3.3E-42 308.4 24.2 262 4-294 2-267 (287)
15 3g0o_A 3-hydroxyisobutyrate de 100.0 3.7E-37 1.2E-41 306.6 25.1 264 3-295 7-276 (303)
16 2h78_A Hibadh, 3-hydroxyisobut 100.0 1.5E-35 5E-40 294.8 27.2 263 3-294 3-276 (302)
17 3l6d_A Putative oxidoreductase 100.0 5E-35 1.7E-39 291.6 22.5 261 3-295 9-276 (306)
18 3qsg_A NAD-binding phosphogluc 100.0 3.7E-33 1.3E-37 278.8 21.6 255 3-295 24-285 (312)
19 4ezb_A Uncharacterized conserv 100.0 9E-33 3.1E-37 276.5 18.0 252 3-295 24-287 (317)
20 1vpd_A Tartronate semialdehyde 100.0 1.2E-31 4E-36 265.9 24.6 261 4-293 6-270 (299)
21 3cky_A 2-hydroxymethyl glutara 100.0 4.5E-31 1.6E-35 262.0 26.2 263 1-292 1-269 (301)
22 2gf2_A Hibadh, 3-hydroxyisobut 100.0 1.2E-30 4.2E-35 258.2 24.4 263 4-294 1-273 (296)
23 1yb4_A Tartronic semialdehyde 100.0 1.3E-30 4.4E-35 257.8 21.1 260 3-292 3-266 (295)
24 2uyy_A N-PAC protein; long-cha 100.0 6.2E-30 2.1E-34 255.8 26.0 262 3-293 30-295 (316)
25 2cvz_A Dehydrogenase, 3-hydrox 100.0 1.9E-30 6.4E-35 255.8 21.5 257 4-293 2-261 (289)
26 4a7p_A UDP-glucose dehydrogena 100.0 1.9E-28 6.6E-33 254.5 23.5 254 4-287 9-297 (446)
27 3gg2_A Sugar dehydrogenase, UD 100.0 1E-27 3.5E-32 250.2 23.0 262 1-294 1-299 (450)
28 3g79_A NDP-N-acetyl-D-galactos 100.0 2.3E-27 7.9E-32 247.8 24.0 255 2-287 17-325 (478)
29 3pid_A UDP-glucose 6-dehydroge 100.0 7.3E-27 2.5E-31 240.7 24.8 250 3-287 36-312 (432)
30 2q3e_A UDP-glucose 6-dehydroge 99.9 5.5E-26 1.9E-30 238.9 21.0 257 1-287 2-304 (467)
31 1i36_A Conserved hypothetical 99.9 4.1E-26 1.4E-30 222.0 18.5 246 4-295 1-249 (264)
32 2o3j_A UDP-glucose 6-dehydroge 99.9 1.5E-25 5.2E-30 236.1 20.1 256 2-287 8-310 (481)
33 3ojo_A CAP5O; rossmann fold, c 99.9 3.2E-25 1.1E-29 228.8 20.4 202 4-222 12-250 (431)
34 2y0c_A BCEC, UDP-glucose dehyd 99.9 1.6E-24 5.3E-29 227.9 25.6 261 3-295 8-310 (478)
35 1mv8_A GMD, GDP-mannose 6-dehy 99.9 1.9E-24 6.4E-29 225.4 18.2 253 4-287 1-293 (436)
36 3k96_A Glycerol-3-phosphate de 99.9 2.6E-24 9E-29 218.0 18.5 288 3-309 29-351 (356)
37 1dlj_A UDP-glucose dehydrogena 99.9 1.7E-22 5.7E-27 208.4 25.9 251 4-287 1-283 (402)
38 3dtt_A NADP oxidoreductase; st 99.9 8E-24 2.7E-28 203.9 10.7 177 3-196 19-231 (245)
39 3vtf_A UDP-glucose 6-dehydroge 99.9 9.2E-22 3.1E-26 202.8 21.2 252 3-287 21-309 (444)
40 2ew2_A 2-dehydropantoate 2-red 99.9 4.1E-22 1.4E-26 198.1 14.2 267 1-293 1-307 (316)
41 1evy_A Glycerol-3-phosphate de 99.9 4E-22 1.4E-26 203.1 8.2 277 4-310 16-346 (366)
42 2dpo_A L-gulonate 3-dehydrogen 99.8 1.9E-20 6.5E-25 186.7 17.5 193 3-223 6-225 (319)
43 1zej_A HBD-9, 3-hydroxyacyl-CO 99.8 1E-20 3.5E-25 186.0 15.0 186 4-223 13-205 (293)
44 1z82_A Glycerol-3-phosphate de 99.8 1.6E-21 5.5E-26 196.3 9.3 273 3-309 14-326 (335)
45 3c24_A Putative oxidoreductase 99.8 4.6E-20 1.6E-24 181.6 14.3 200 3-223 11-229 (286)
46 1yj8_A Glycerol-3-phosphate de 99.8 2.3E-20 7.9E-25 190.8 12.4 284 3-310 21-369 (375)
47 2ahr_A Putative pyrroline carb 99.8 2.7E-19 9.2E-24 173.3 17.9 226 3-261 3-236 (259)
48 3d1l_A Putative NADP oxidoredu 99.8 3.8E-20 1.3E-24 180.1 11.5 198 3-224 10-212 (266)
49 1txg_A Glycerol-3-phosphate de 99.8 2.9E-19 9.9E-24 179.4 17.4 201 4-219 1-243 (335)
50 2qyt_A 2-dehydropantoate 2-red 99.8 7.7E-20 2.6E-24 182.1 12.9 251 3-286 8-306 (317)
51 1ks9_A KPA reductase;, 2-dehyd 99.8 5.5E-21 1.9E-25 187.8 4.5 256 4-292 1-285 (291)
52 1x0v_A GPD-C, GPDH-C, glycerol 99.8 3.9E-19 1.3E-23 180.0 16.6 204 1-218 6-257 (354)
53 1yqg_A Pyrroline-5-carboxylate 99.8 4.3E-19 1.5E-23 172.1 15.5 235 4-293 1-253 (263)
54 2izz_A Pyrroline-5-carboxylate 99.8 2.6E-18 8.7E-23 172.0 21.1 197 1-223 20-229 (322)
55 3ggo_A Prephenate dehydrogenas 99.8 5.1E-18 1.8E-22 169.1 20.8 171 3-192 33-219 (314)
56 3gt0_A Pyrroline-5-carboxylate 99.8 4.3E-17 1.5E-21 156.8 21.6 192 3-223 2-205 (247)
57 4e12_A Diketoreductase; oxidor 99.8 2.2E-17 7.6E-22 162.1 19.6 198 2-223 3-223 (283)
58 2g5c_A Prephenate dehydrogenas 99.8 3.6E-17 1.2E-21 160.3 19.8 177 4-199 2-194 (281)
59 3mog_A Probable 3-hydroxybutyr 99.7 1.7E-17 5.8E-22 174.2 16.8 189 3-223 5-221 (483)
60 1bg6_A N-(1-D-carboxylethyl)-L 99.7 9.1E-18 3.1E-22 170.0 13.2 280 1-294 2-328 (359)
61 2rcy_A Pyrroline carboxylate r 99.7 2.9E-17 9.8E-22 159.2 15.2 186 1-223 2-199 (262)
62 3k6j_A Protein F01G10.3, confi 99.7 9.6E-17 3.3E-21 166.4 19.0 192 3-224 54-268 (460)
63 3b1f_A Putative prephenate deh 99.7 6.2E-17 2.1E-21 159.3 14.6 162 1-178 4-181 (290)
64 3tri_A Pyrroline-5-carboxylate 99.7 6.3E-16 2.2E-20 151.5 21.6 196 1-223 1-207 (280)
65 1jay_A Coenzyme F420H2:NADP+ o 99.7 1.1E-16 3.9E-21 149.9 15.7 178 4-196 1-199 (212)
66 1f0y_A HCDH, L-3-hydroxyacyl-C 99.7 4E-16 1.4E-20 154.6 20.1 192 3-223 15-237 (302)
67 3ktd_A Prephenate dehydrogenas 99.7 7.7E-17 2.6E-21 161.8 14.1 171 3-191 8-200 (341)
68 2f1k_A Prephenate dehydrogenas 99.7 6.9E-16 2.4E-20 150.9 17.3 173 4-197 1-186 (279)
69 3ghy_A Ketopantoate reductase 99.7 2.1E-16 7.2E-21 158.9 13.0 254 1-286 1-312 (335)
70 4huj_A Uncharacterized protein 99.7 5E-17 1.7E-21 153.7 7.6 162 1-184 21-204 (220)
71 2yjz_A Metalloreductase steap4 99.5 6.8E-18 2.3E-22 157.4 0.0 158 3-188 19-192 (201)
72 3hwr_A 2-dehydropantoate 2-red 99.6 1.9E-15 6.4E-20 150.9 16.5 252 3-286 19-303 (318)
73 2i76_A Hypothetical protein; N 99.6 1.1E-16 3.7E-21 156.7 7.1 183 3-216 2-190 (276)
74 1zcj_A Peroxisomal bifunctiona 99.6 2.9E-15 1E-19 156.9 17.5 191 2-223 36-250 (463)
75 2pv7_A T-protein [includes: ch 99.6 3E-15 1E-19 148.0 16.0 178 4-220 22-203 (298)
76 1wdk_A Fatty oxidation complex 99.6 2.4E-15 8.2E-20 165.2 15.5 191 2-223 313-529 (715)
77 2wtb_A MFP2, fatty acid multif 99.6 3.1E-15 1.1E-19 164.4 15.8 190 3-223 312-527 (725)
78 3i83_A 2-dehydropantoate 2-red 99.6 2.6E-15 8.9E-20 150.0 12.7 251 3-286 2-293 (320)
79 3hn2_A 2-dehydropantoate 2-red 99.6 1.8E-14 6.1E-19 143.4 18.5 256 4-291 3-298 (312)
80 2vns_A Metalloreductase steap3 99.6 7.9E-16 2.7E-20 144.9 7.0 165 3-188 28-204 (215)
81 2raf_A Putative dinucleotide-b 99.6 1.5E-15 5.3E-20 142.3 7.3 151 3-192 19-190 (209)
82 3ado_A Lambda-crystallin; L-gu 99.6 2.7E-14 9.4E-19 141.5 16.3 193 4-223 7-225 (319)
83 4fgw_A Glycerol-3-phosphate de 99.6 2.4E-15 8.3E-20 152.7 7.7 280 4-295 35-373 (391)
84 4gwg_A 6-phosphogluconate dehy 99.5 5.2E-15 1.8E-19 154.8 8.6 119 320-446 177-300 (484)
85 3dfu_A Uncharacterized protein 99.5 8.8E-14 3E-18 131.4 12.9 155 3-209 6-162 (232)
86 1np3_A Ketol-acid reductoisome 99.5 2.9E-13 9.8E-18 136.1 13.9 193 3-218 16-223 (338)
87 3g17_A Similar to 2-dehydropan 99.5 1.5E-14 5.3E-19 142.6 3.9 246 3-286 2-275 (294)
88 3ego_A Probable 2-dehydropanto 99.4 3.9E-13 1.4E-17 133.3 9.1 92 3-108 2-103 (307)
89 2i99_A MU-crystallin homolog; 99.3 2E-14 6.7E-19 143.0 -4.4 135 3-150 135-280 (312)
90 3gvx_A Glycerate dehydrogenase 99.3 2.7E-12 9.3E-17 125.7 7.8 117 4-135 123-240 (290)
91 3zwc_A Peroxisomal bifunctiona 99.3 2.7E-11 9.2E-16 132.8 16.3 193 3-225 316-531 (742)
92 2gcg_A Glyoxylate reductase/hy 99.3 1.7E-11 5.7E-16 122.8 12.6 111 4-125 156-267 (330)
93 3c7a_A Octopine dehydrogenase; 99.3 5.3E-11 1.8E-15 122.4 16.2 99 3-105 2-117 (404)
94 2dbq_A Glyoxylate reductase; D 99.3 3.3E-11 1.1E-15 120.8 13.5 120 3-134 150-270 (334)
95 2w2k_A D-mandelate dehydrogena 99.3 2.8E-11 9.6E-16 121.9 12.9 121 4-134 164-286 (348)
96 3jtm_A Formate dehydrogenase, 99.2 1.5E-11 5E-16 123.7 9.0 121 4-134 165-286 (351)
97 2dc1_A L-aspartate dehydrogena 99.2 1.4E-12 4.6E-17 124.5 1.0 159 4-193 1-165 (236)
98 4dgs_A Dehydrogenase; structur 99.2 4E-11 1.4E-15 119.9 10.9 116 4-134 172-288 (340)
99 3gg9_A D-3-phosphoglycerate de 99.2 2.5E-11 8.6E-16 122.1 9.3 120 4-134 161-281 (352)
100 3ba1_A HPPR, hydroxyphenylpyru 99.2 5.3E-11 1.8E-15 119.0 11.4 114 4-132 165-279 (333)
101 3evt_A Phosphoglycerate dehydr 99.2 8E-12 2.7E-16 124.4 5.4 120 4-135 138-258 (324)
102 1mx3_A CTBP1, C-terminal bindi 99.2 3.9E-11 1.3E-15 120.6 9.8 117 4-131 169-286 (347)
103 2pi1_A D-lactate dehydrogenase 99.2 1.1E-10 3.8E-15 116.7 12.7 119 4-135 142-261 (334)
104 4e5n_A Thermostable phosphite 99.2 3.3E-11 1.1E-15 120.4 8.7 120 4-134 146-266 (330)
105 1gdh_A D-glycerate dehydrogena 99.2 6.7E-11 2.3E-15 117.8 10.4 110 4-124 147-258 (320)
106 3hg7_A D-isomer specific 2-hyd 99.2 8.3E-12 2.8E-16 124.1 3.8 119 4-134 141-260 (324)
107 4g2n_A D-isomer specific 2-hyd 99.2 5.2E-11 1.8E-15 119.4 9.4 120 4-135 174-294 (345)
108 2d0i_A Dehydrogenase; structur 99.2 6.4E-11 2.2E-15 118.6 9.8 117 4-133 147-264 (333)
109 1wwk_A Phosphoglycerate dehydr 99.2 1.1E-10 3.6E-15 115.7 10.8 109 4-124 143-252 (307)
110 2ekl_A D-3-phosphoglycerate de 99.2 6.1E-11 2.1E-15 117.7 9.0 118 4-133 143-261 (313)
111 2yq5_A D-isomer specific 2-hyd 99.1 9E-11 3.1E-15 117.5 10.2 118 4-135 149-267 (343)
112 1ygy_A PGDH, D-3-phosphoglycer 99.1 2E-10 6.7E-15 122.1 13.2 151 3-165 142-307 (529)
113 3pp8_A Glyoxylate/hydroxypyruv 99.1 1.4E-11 4.8E-16 122.2 3.9 119 4-134 140-259 (315)
114 2nac_A NAD-dependent formate d 99.1 7.1E-11 2.4E-15 120.3 9.1 119 4-132 192-311 (393)
115 2g76_A 3-PGDH, D-3-phosphoglyc 99.1 1.1E-10 3.9E-15 116.6 10.4 109 4-124 166-275 (335)
116 2j6i_A Formate dehydrogenase; 99.1 1E-10 3.5E-15 118.4 9.3 118 4-131 165-284 (364)
117 4hy3_A Phosphoglycerate oxidor 99.1 3.3E-10 1.1E-14 114.2 12.6 118 4-134 177-295 (365)
118 3fr7_A Putative ketol-acid red 99.1 2.5E-10 8.4E-15 117.4 11.6 147 4-164 55-229 (525)
119 1qp8_A Formate dehydrogenase; 99.1 9.9E-11 3.4E-15 115.6 6.9 113 3-131 124-237 (303)
120 3k5p_A D-3-phosphoglycerate de 99.1 1.4E-10 4.8E-15 118.5 7.6 117 4-134 157-274 (416)
121 3oet_A Erythronate-4-phosphate 99.1 1.4E-10 4.9E-15 117.1 7.2 117 4-135 120-241 (381)
122 1j4a_A D-LDH, D-lactate dehydr 99.1 3.9E-10 1.3E-14 112.9 10.0 118 4-134 147-265 (333)
123 1sc6_A PGDH, D-3-phosphoglycer 99.0 2.1E-10 7.3E-15 117.4 7.2 107 4-124 146-253 (404)
124 2cuk_A Glycerate dehydrogenase 99.0 2.5E-10 8.6E-15 113.1 7.0 103 4-124 145-248 (311)
125 1y81_A Conserved hypothetical 99.0 9.6E-10 3.3E-14 95.7 8.5 104 3-127 14-121 (138)
126 2o4c_A Erythronate-4-phosphate 99.0 5.7E-10 1.9E-14 113.0 7.9 116 4-134 117-237 (380)
127 1dxy_A D-2-hydroxyisocaproate 99.0 5.3E-10 1.8E-14 111.9 7.5 118 4-135 146-264 (333)
128 1xdw_A NAD+-dependent (R)-2-hy 99.0 5E-10 1.7E-14 112.0 6.8 118 4-135 147-265 (331)
129 2d5c_A AROE, shikimate 5-dehyd 98.9 2E-09 6.8E-14 104.1 9.5 109 5-128 118-228 (263)
130 2rir_A Dipicolinate synthase, 98.9 3.1E-09 1.1E-13 104.8 9.4 138 4-164 158-296 (300)
131 2hk9_A Shikimate dehydrogenase 98.9 1.5E-09 5.3E-14 105.6 6.9 110 4-128 130-241 (275)
132 2duw_A Putative COA-binding pr 98.9 2.4E-09 8.3E-14 94.0 6.6 104 3-127 13-122 (145)
133 1lss_A TRK system potassium up 98.8 4.3E-08 1.5E-12 84.3 13.8 117 3-129 4-122 (140)
134 3uuw_A Putative oxidoreductase 98.8 3.2E-08 1.1E-12 97.7 13.5 114 1-127 4-122 (308)
135 3oj0_A Glutr, glutamyl-tRNA re 98.8 1.1E-08 3.7E-13 89.5 7.2 90 4-105 22-111 (144)
136 3e9m_A Oxidoreductase, GFO/IDH 98.7 6.2E-08 2.1E-12 96.7 12.7 115 3-128 5-124 (330)
137 3db2_A Putative NADPH-dependen 98.7 8E-08 2.7E-12 96.8 13.6 115 3-128 5-123 (354)
138 4hkt_A Inositol 2-dehydrogenas 98.7 1E-07 3.4E-12 95.1 13.8 114 3-128 3-120 (331)
139 3d4o_A Dipicolinate synthase s 98.7 6.2E-08 2.1E-12 95.1 11.6 112 3-131 155-268 (293)
140 3euw_A MYO-inositol dehydrogen 98.7 9.1E-08 3.1E-12 95.9 12.8 118 1-128 1-122 (344)
141 3c85_A Putative glutathione-re 98.7 1.1E-07 3.9E-12 86.2 12.3 115 4-129 40-159 (183)
142 1hyh_A L-hicdh, L-2-hydroxyiso 98.7 9.7E-08 3.3E-12 94.4 12.7 98 4-106 2-124 (309)
143 3rc1_A Sugar 3-ketoreductase; 98.7 1.2E-07 4.1E-12 95.4 13.5 117 1-128 25-146 (350)
144 3q2i_A Dehydrogenase; rossmann 98.7 1.2E-07 4.1E-12 95.5 13.4 114 3-127 13-131 (354)
145 1x7d_A Ornithine cyclodeaminas 98.7 9.2E-09 3.1E-13 103.5 5.0 119 4-129 130-250 (350)
146 3ezy_A Dehydrogenase; structur 98.7 1.5E-07 5.2E-12 94.4 13.2 116 3-128 2-121 (344)
147 3llv_A Exopolyphosphatase-rela 98.6 2.5E-07 8.6E-12 80.1 12.1 116 3-129 6-123 (141)
148 3ec7_A Putative dehydrogenase; 98.6 1.8E-07 6.3E-12 94.3 12.8 116 1-125 21-141 (357)
149 1tlt_A Putative oxidoreductase 98.6 2E-07 6.7E-12 92.5 12.8 113 3-128 5-122 (319)
150 3fwz_A Inner membrane protein 98.6 2.3E-07 7.9E-12 80.5 11.7 116 4-129 8-125 (140)
151 2egg_A AROE, shikimate 5-dehyd 98.6 1E-07 3.5E-12 93.7 9.7 118 3-128 141-262 (297)
152 2ewd_A Lactate dehydrogenase,; 98.6 1.7E-07 5.8E-12 93.0 11.3 102 1-107 1-124 (317)
153 3kb6_A D-lactate dehydrogenase 98.6 1E-07 3.5E-12 95.2 9.5 119 4-135 142-261 (334)
154 2p4q_A 6-phosphogluconate dehy 98.6 7.1E-08 2.4E-12 101.5 8.8 117 321-445 183-304 (497)
155 2p2s_A Putative oxidoreductase 98.6 2.5E-07 8.5E-12 92.4 12.3 116 1-126 2-121 (336)
156 3ic5_A Putative saccharopine d 98.6 3.3E-07 1.1E-11 76.2 11.0 104 3-116 5-111 (118)
157 1omo_A Alanine dehydrogenase; 98.6 7.5E-08 2.6E-12 95.8 8.0 114 4-129 126-241 (322)
158 3mz0_A Inositol 2-dehydrogenas 98.6 3.7E-07 1.3E-11 91.5 12.5 114 3-125 2-120 (344)
159 2z2v_A Hypothetical protein PH 98.6 1E-07 3.5E-12 96.5 8.3 113 4-127 17-130 (365)
160 1a5z_A L-lactate dehydrogenase 98.5 4.8E-07 1.6E-11 89.9 12.8 98 4-107 1-119 (319)
161 2iz1_A 6-phosphogluconate dehy 98.5 1.2E-07 4.1E-12 99.4 8.8 117 321-445 179-301 (474)
162 2ho3_A Oxidoreductase, GFO/IDH 98.5 4.4E-07 1.5E-11 90.2 12.5 115 4-129 2-120 (325)
163 2hjr_A Malate dehydrogenase; m 98.5 7.2E-07 2.5E-11 88.9 13.8 99 3-106 14-133 (328)
164 1xea_A Oxidoreductase, GFO/IDH 98.5 4.3E-07 1.5E-11 90.2 12.2 114 3-128 2-120 (323)
165 3e18_A Oxidoreductase; dehydro 98.5 5.4E-07 1.8E-11 91.0 12.6 112 3-126 5-120 (359)
166 3ohs_X Trans-1,2-dihydrobenzen 98.5 9.2E-07 3.1E-11 88.2 13.9 115 3-128 2-123 (334)
167 3cea_A MYO-inositol 2-dehydrog 98.5 6.7E-07 2.3E-11 89.5 12.8 115 3-128 8-129 (346)
168 2glx_A 1,5-anhydro-D-fructose 98.5 9.9E-07 3.4E-11 87.7 14.0 115 4-129 1-120 (332)
169 3m2t_A Probable dehydrogenase; 98.5 3.1E-07 1E-11 92.8 9.9 114 3-126 5-123 (359)
170 3evn_A Oxidoreductase, GFO/IDH 98.5 4.1E-07 1.4E-11 90.7 9.8 117 2-129 4-125 (329)
171 2pgd_A 6-phosphogluconate dehy 98.5 2.7E-07 9.1E-12 96.9 8.9 117 321-445 176-297 (482)
172 3c1a_A Putative oxidoreductase 98.4 3.6E-07 1.2E-11 90.5 8.9 134 3-164 10-147 (315)
173 1guz_A Malate dehydrogenase; o 98.4 1.5E-06 5.1E-11 85.9 13.1 97 4-105 1-119 (310)
174 2zyd_A 6-phosphogluconate dehy 98.4 1.9E-07 6.3E-12 98.0 6.8 116 321-444 188-308 (480)
175 3hdj_A Probable ornithine cycl 98.4 2.8E-07 9.5E-12 91.2 7.3 114 4-129 122-238 (313)
176 1pzg_A LDH, lactate dehydrogen 98.4 2.1E-06 7.1E-11 85.6 13.6 99 4-106 10-134 (331)
177 1ydw_A AX110P-like protein; st 98.4 1.7E-06 5.9E-11 87.2 13.0 120 2-128 5-128 (362)
178 2hmt_A YUAA protein; RCK, KTN, 98.4 9.2E-07 3.2E-11 76.1 9.5 117 3-129 6-124 (144)
179 2v6b_A L-LDH, L-lactate dehydr 98.4 1.9E-06 6.3E-11 85.0 12.8 99 4-107 1-119 (304)
180 1t2d_A LDH-P, L-lactate dehydr 98.4 2.7E-06 9.2E-11 84.5 14.0 99 3-106 4-128 (322)
181 2g1u_A Hypothetical protein TM 98.4 6.8E-07 2.3E-11 78.9 8.4 115 4-129 20-137 (155)
182 3don_A Shikimate dehydrogenase 98.4 1E-07 3.5E-12 92.6 3.2 111 4-127 118-231 (277)
183 1h6d_A Precursor form of gluco 98.4 1.3E-06 4.4E-11 90.5 11.7 122 1-128 81-207 (433)
184 3l4b_C TRKA K+ channel protien 98.4 1.9E-06 6.4E-11 80.5 11.8 117 4-129 1-119 (218)
185 1iuk_A Hypothetical protein TT 98.4 2.7E-07 9.2E-12 80.4 5.3 105 3-127 13-122 (140)
186 3u62_A Shikimate dehydrogenase 98.4 4.7E-07 1.6E-11 86.8 7.1 105 5-124 110-216 (253)
187 1v8b_A Adenosylhomocysteinase; 98.4 7.8E-07 2.7E-11 92.4 9.0 99 4-116 258-357 (479)
188 3phh_A Shikimate dehydrogenase 98.3 4.9E-07 1.7E-11 87.2 6.6 109 4-127 119-229 (269)
189 1ur5_A Malate dehydrogenase; o 98.3 3.9E-06 1.3E-10 82.9 13.2 98 3-105 2-120 (309)
190 1lld_A L-lactate dehydrogenase 98.3 1.8E-06 6E-11 85.5 10.8 100 3-107 7-127 (319)
191 4had_A Probable oxidoreductase 98.3 4E-06 1.4E-10 84.0 13.5 116 2-127 22-142 (350)
192 3u3x_A Oxidoreductase; structu 98.3 2.9E-06 1E-10 85.6 12.4 115 2-126 25-143 (361)
193 2ixa_A Alpha-N-acetylgalactosa 98.3 4.5E-06 1.5E-10 86.6 13.5 120 1-126 18-146 (444)
194 3moi_A Probable dehydrogenase; 98.3 5.7E-06 1.9E-10 84.3 13.7 115 3-128 2-121 (387)
195 3d64_A Adenosylhomocysteinase; 98.3 1.4E-06 4.7E-11 90.9 9.2 100 4-118 278-378 (494)
196 1pgj_A 6PGDH, 6-PGDH, 6-phosph 98.3 1E-06 3.4E-11 92.4 8.2 116 321-445 178-299 (478)
197 2d59_A Hypothetical protein PH 98.3 8.2E-07 2.8E-11 77.6 6.3 105 3-128 22-130 (144)
198 3bio_A Oxidoreductase, GFO/IDH 98.3 1.4E-06 4.8E-11 85.9 8.6 108 2-125 8-120 (304)
199 2nvw_A Galactose/lactose metab 98.3 3.2E-06 1.1E-10 88.6 11.9 121 3-127 39-171 (479)
200 3p2y_A Alanine dehydrogenase/p 98.3 8.4E-07 2.9E-11 89.4 7.0 99 4-105 185-303 (381)
201 3kux_A Putative oxidoreductase 98.3 5.7E-06 1.9E-10 83.1 12.9 111 3-126 7-122 (352)
202 3v5n_A Oxidoreductase; structu 98.3 6.6E-06 2.3E-10 84.6 13.7 117 3-126 37-165 (417)
203 3h9u_A Adenosylhomocysteinase; 98.3 1.6E-06 5.6E-11 88.5 8.8 91 4-108 212-302 (436)
204 4dio_A NAD(P) transhydrogenase 98.3 1.3E-06 4.4E-11 88.8 7.7 99 4-105 191-313 (405)
205 3btv_A Galactose/lactose metab 98.2 3.1E-06 1.1E-10 87.7 10.5 122 3-128 20-152 (438)
206 3gvi_A Malate dehydrogenase; N 98.2 9.8E-06 3.3E-10 80.4 13.6 101 1-106 5-126 (324)
207 3e82_A Putative oxidoreductase 98.2 7.1E-06 2.4E-10 82.9 12.7 110 4-126 8-122 (364)
208 1leh_A Leucine dehydrogenase; 98.2 2.6E-06 8.7E-11 85.8 9.0 109 4-127 174-282 (364)
209 3gdo_A Uncharacterized oxidore 98.2 7.5E-06 2.6E-10 82.5 12.4 111 3-126 5-120 (358)
210 4gqa_A NAD binding oxidoreduct 98.2 6.7E-06 2.3E-10 84.4 12.1 114 4-127 27-152 (412)
211 3dty_A Oxidoreductase, GFO/IDH 98.2 6.8E-06 2.3E-10 84.0 12.0 117 3-126 12-140 (398)
212 3abi_A Putative uncharacterize 98.2 3.9E-06 1.3E-10 84.8 10.1 121 3-134 16-138 (365)
213 3f4l_A Putative oxidoreductase 98.2 2.7E-06 9.3E-11 85.2 8.7 113 3-126 2-120 (345)
214 1zh8_A Oxidoreductase; TM0312, 98.2 1.3E-05 4.5E-10 80.0 13.7 115 3-127 18-138 (340)
215 3qy9_A DHPR, dihydrodipicolina 98.2 4.8E-06 1.6E-10 79.1 9.9 87 1-109 1-88 (243)
216 3p7m_A Malate dehydrogenase; p 98.2 1.6E-05 5.3E-10 78.9 13.9 101 1-106 3-124 (321)
217 4fb5_A Probable oxidoreductase 98.2 7.2E-06 2.5E-10 83.1 11.8 113 4-126 26-149 (393)
218 1id1_A Putative potassium chan 98.2 2.6E-05 8.9E-10 68.3 13.7 119 1-128 1-124 (153)
219 3o8q_A Shikimate 5-dehydrogena 98.2 2.7E-06 9.1E-11 82.8 7.9 114 4-127 127-243 (281)
220 1obb_A Maltase, alpha-glucosid 98.2 1.4E-05 4.8E-10 83.2 13.6 76 1-79 1-87 (480)
221 3d0o_A L-LDH 1, L-lactate dehy 98.2 1.4E-05 4.8E-10 79.1 12.7 100 2-105 5-124 (317)
222 1p77_A Shikimate 5-dehydrogena 98.1 2.8E-06 9.5E-11 82.3 7.0 117 3-127 119-237 (272)
223 4h3v_A Oxidoreductase domain p 98.1 1.2E-05 4.3E-10 81.2 12.0 117 1-126 4-133 (390)
224 3fhl_A Putative oxidoreductase 98.1 6E-06 2E-10 83.3 9.5 111 3-126 5-120 (362)
225 1oju_A MDH, malate dehydrogena 98.1 1.6E-05 5.5E-10 77.7 12.2 97 4-105 1-119 (294)
226 3ce6_A Adenosylhomocysteinase; 98.1 9E-06 3.1E-10 84.9 10.6 91 4-108 275-365 (494)
227 4gmf_A Yersiniabactin biosynth 98.1 5E-06 1.7E-10 84.2 8.4 114 4-127 8-124 (372)
228 3i23_A Oxidoreductase, GFO/IDH 98.1 1.2E-05 4.1E-10 80.6 11.1 115 3-127 2-121 (349)
229 3tl2_A Malate dehydrogenase; c 98.1 3.9E-05 1.3E-09 75.8 14.2 99 3-106 8-129 (315)
230 1y6j_A L-lactate dehydrogenase 98.1 2.1E-05 7.1E-10 77.9 12.3 99 3-105 7-124 (318)
231 3fef_A Putative glucosidase LP 98.1 1.7E-05 5.8E-10 81.9 11.8 75 2-80 4-86 (450)
232 1ff9_A Saccharopine reductase; 98.1 2.8E-05 9.5E-10 80.7 13.2 118 1-128 1-122 (450)
233 1ldn_A L-lactate dehydrogenase 98.1 2.6E-05 8.8E-10 77.2 12.3 99 3-105 6-124 (316)
234 3ulk_A Ketol-acid reductoisome 98.1 1.7E-05 5.7E-10 80.4 10.7 90 4-105 38-133 (491)
235 1nyt_A Shikimate 5-dehydrogena 98.0 3E-05 1E-09 74.9 12.3 113 3-124 119-232 (271)
236 1npy_A Hypothetical shikimate 98.0 3.9E-06 1.3E-10 81.2 5.7 112 4-129 120-236 (271)
237 1f06_A MESO-diaminopimelate D- 98.0 1.2E-05 4.2E-10 79.6 9.5 89 1-106 1-91 (320)
238 1u8x_X Maltose-6'-phosphate gl 98.0 2.3E-05 7.7E-10 81.6 11.6 74 4-80 29-113 (472)
239 2vhw_A Alanine dehydrogenase; 98.0 7.1E-06 2.4E-10 83.3 7.0 95 4-105 169-269 (377)
240 3gvp_A Adenosylhomocysteinase 98.0 8.1E-06 2.8E-10 83.2 7.1 90 4-108 221-311 (435)
241 3n58_A Adenosylhomocysteinase; 98.0 2.2E-05 7.4E-10 80.2 10.2 90 4-108 248-338 (464)
242 2i6t_A Ubiquitin-conjugating e 98.0 2E-05 6.8E-10 77.5 9.6 95 3-106 14-127 (303)
243 3oqb_A Oxidoreductase; structu 98.0 3.9E-05 1.3E-09 77.8 12.1 115 3-128 6-140 (383)
244 3fi9_A Malate dehydrogenase; s 97.9 7.1E-05 2.4E-09 74.7 12.9 76 1-79 6-86 (343)
245 2axq_A Saccharopine dehydrogen 97.9 5E-05 1.7E-09 79.1 12.1 117 3-128 23-142 (467)
246 4e21_A 6-phosphogluconate dehy 97.9 1.1E-05 3.6E-10 81.4 6.7 86 211-308 259-345 (358)
247 1gpj_A Glutamyl-tRNA reductase 97.9 2.6E-05 8.9E-10 79.8 9.5 95 4-105 168-267 (404)
248 3l9w_A Glutathione-regulated p 97.9 4.7E-05 1.6E-09 78.1 11.4 115 4-129 5-122 (413)
249 3pqe_A L-LDH, L-lactate dehydr 97.9 7.5E-05 2.6E-09 74.1 12.3 99 3-106 5-124 (326)
250 1x13_A NAD(P) transhydrogenase 97.9 1.9E-05 6.6E-10 80.7 7.8 91 4-105 173-293 (401)
251 3ldh_A Lactate dehydrogenase; 97.9 5.1E-05 1.7E-09 75.2 10.5 99 3-106 21-140 (330)
252 3jyo_A Quinate/shikimate dehyd 97.9 3.6E-05 1.2E-09 74.9 9.3 117 4-127 128-250 (283)
253 2d4a_B Malate dehydrogenase; a 97.9 0.00011 3.8E-09 72.3 12.7 96 5-105 1-117 (308)
254 4ew6_A D-galactose-1-dehydroge 97.9 5.8E-05 2E-09 75.1 10.6 111 1-128 23-138 (330)
255 2nu8_A Succinyl-COA ligase [AD 97.9 4.2E-05 1.4E-09 74.6 9.3 112 3-127 7-120 (288)
256 3pwz_A Shikimate dehydrogenase 97.9 2E-05 6.9E-10 76.2 7.0 114 4-127 121-237 (272)
257 3oa2_A WBPB; oxidoreductase, s 97.9 5.8E-05 2E-09 74.7 10.5 116 3-127 3-129 (318)
258 2eez_A Alanine dehydrogenase; 97.9 2.8E-05 9.4E-10 78.7 8.3 95 4-105 167-267 (369)
259 3nep_X Malate dehydrogenase; h 97.8 8.2E-05 2.8E-09 73.4 11.4 98 4-106 1-120 (314)
260 3upl_A Oxidoreductase; rossman 97.8 0.00013 4.5E-09 74.9 13.2 118 3-126 23-162 (446)
261 4gbj_A 6-phosphogluconate dehy 97.8 0.00017 5.7E-09 70.6 13.5 105 321-439 167-271 (297)
262 1ez4_A Lactate dehydrogenase; 97.8 0.00015 5.2E-09 71.6 12.6 99 4-106 6-123 (318)
263 3o9z_A Lipopolysaccaride biosy 97.8 6.9E-05 2.4E-09 73.9 10.0 115 3-127 3-128 (312)
264 3do5_A HOM, homoserine dehydro 97.8 5.9E-05 2E-09 74.9 9.3 125 3-133 2-146 (327)
265 2zqz_A L-LDH, L-lactate dehydr 97.8 0.00021 7.2E-09 70.9 13.0 100 3-106 9-127 (326)
266 1lc0_A Biliverdin reductase A; 97.8 6.9E-05 2.4E-09 73.2 9.2 110 3-129 7-123 (294)
267 2xxj_A L-LDH, L-lactate dehydr 97.7 0.0002 6.9E-09 70.5 12.3 99 4-106 1-118 (310)
268 1s6y_A 6-phospho-beta-glucosid 97.7 0.00015 5.1E-09 75.0 11.7 75 3-80 7-94 (450)
269 3mtj_A Homoserine dehydrogenas 97.7 0.00011 3.9E-09 75.6 10.5 118 4-133 11-141 (444)
270 4ina_A Saccharopine dehydrogen 97.7 0.00011 3.8E-09 75.2 10.4 120 4-128 2-139 (405)
271 3ing_A Homoserine dehydrogenas 97.7 8.2E-05 2.8E-09 73.7 8.9 131 1-133 2-148 (325)
272 4aj2_A L-lactate dehydrogenase 97.7 0.00031 1.1E-08 69.7 13.1 99 3-106 19-138 (331)
273 1nvt_A Shikimate 5'-dehydrogen 97.7 7.9E-05 2.7E-09 72.5 8.7 116 3-126 128-250 (287)
274 3vku_A L-LDH, L-lactate dehydr 97.7 0.00026 8.8E-09 70.1 12.4 100 3-106 9-127 (326)
275 3ip3_A Oxidoreductase, putativ 97.7 6.3E-05 2.2E-09 74.9 7.7 115 3-124 2-120 (337)
276 1pjc_A Protein (L-alanine dehy 97.7 9.6E-05 3.3E-09 74.4 9.1 99 4-106 168-269 (361)
277 2aef_A Calcium-gated potassium 97.7 0.00011 3.8E-09 69.0 8.8 113 4-129 10-125 (234)
278 1l7d_A Nicotinamide nucleotide 97.7 6.7E-05 2.3E-09 76.2 7.8 92 4-105 173-295 (384)
279 3obb_A Probable 3-hydroxyisobu 97.7 8.6E-05 2.9E-09 72.8 8.3 108 321-440 166-277 (300)
280 4f3y_A DHPR, dihydrodipicolina 97.6 7.5E-05 2.5E-09 72.1 7.2 97 1-109 5-109 (272)
281 3tnl_A Shikimate dehydrogenase 97.6 0.00021 7.2E-09 70.4 9.9 121 4-127 155-284 (315)
282 1oi7_A Succinyl-COA synthetase 97.6 0.00014 4.8E-09 70.8 8.0 112 3-127 7-120 (288)
283 1mld_A Malate dehydrogenase; o 97.6 0.00041 1.4E-08 68.4 11.4 96 4-105 1-118 (314)
284 3fbt_A Chorismate mutase and s 97.5 0.00018 6E-09 69.9 8.1 109 4-127 123-235 (282)
285 2yv1_A Succinyl-COA ligase [AD 97.5 0.00028 9.5E-09 68.9 9.1 109 4-127 14-126 (294)
286 2czc_A Glyceraldehyde-3-phosph 97.5 0.0003 1E-08 70.0 9.5 94 3-103 2-109 (334)
287 1c1d_A L-phenylalanine dehydro 97.4 0.00085 2.9E-08 67.0 12.0 108 4-127 176-283 (355)
288 3c8m_A Homoserine dehydrogenas 97.4 0.00019 6.4E-09 71.4 6.7 125 3-132 6-151 (331)
289 1smk_A Malate dehydrogenase, g 97.4 0.00049 1.7E-08 68.2 9.8 96 3-105 8-126 (326)
290 3ond_A Adenosylhomocysteinase; 97.4 0.00051 1.7E-08 71.2 9.9 90 4-107 266-355 (488)
291 2x0j_A Malate dehydrogenase; o 97.4 0.0015 5.3E-08 63.5 12.7 98 4-106 1-120 (294)
292 1nvm_B Acetaldehyde dehydrogen 97.4 0.0004 1.4E-08 68.4 8.5 99 1-107 1-107 (312)
293 3ius_A Uncharacterized conserv 97.3 0.00051 1.8E-08 66.0 8.7 70 2-79 4-73 (286)
294 4g65_A TRK system potassium up 97.3 0.00028 9.5E-09 73.4 7.0 85 3-91 3-89 (461)
295 2fp4_A Succinyl-COA ligase [GD 97.3 0.00041 1.4E-08 68.1 7.7 112 3-127 13-128 (305)
296 3eag_A UDP-N-acetylmuramate:L- 97.3 0.0016 5.4E-08 64.5 12.1 113 3-123 4-135 (326)
297 3ngx_A Bifunctional protein fo 97.3 0.00052 1.8E-08 65.8 8.1 74 4-107 151-225 (276)
298 3qvo_A NMRA family protein; st 97.3 0.00024 8.3E-09 66.6 5.8 73 1-80 21-99 (236)
299 3t4e_A Quinate/shikimate dehyd 97.3 0.00079 2.7E-08 66.2 9.6 118 4-127 149-278 (312)
300 1b8p_A Protein (malate dehydro 97.3 0.0022 7.4E-08 63.6 12.8 100 3-105 5-134 (329)
301 3r6d_A NAD-dependent epimerase 97.3 0.00078 2.7E-08 62.2 8.9 72 3-79 5-83 (221)
302 1j5p_A Aspartate dehydrogenase 97.3 0.00042 1.4E-08 65.7 7.0 108 3-133 12-124 (253)
303 2vt3_A REX, redox-sensing tran 97.3 9.2E-05 3.2E-09 68.9 2.4 79 4-92 86-167 (215)
304 2yv2_A Succinyl-COA synthetase 97.3 0.00085 2.9E-08 65.6 9.4 112 4-127 14-127 (297)
305 1edz_A 5,10-methylenetetrahydr 97.2 5.8E-05 2E-09 74.3 0.7 91 4-106 178-277 (320)
306 1dih_A Dihydrodipicolinate red 97.2 0.00016 5.3E-09 70.0 3.2 96 3-107 5-106 (273)
307 3ff4_A Uncharacterized protein 97.2 0.00051 1.7E-08 57.9 6.0 103 3-127 4-110 (122)
308 1o6z_A MDH, malate dehydrogena 97.1 0.004 1.4E-07 60.9 12.8 98 4-105 1-120 (303)
309 4a26_A Putative C-1-tetrahydro 97.1 0.00078 2.7E-08 65.4 7.4 76 4-107 166-242 (300)
310 1vl6_A Malate oxidoreductase; 97.1 0.0009 3.1E-08 67.2 8.1 101 3-111 192-301 (388)
311 3ijp_A DHPR, dihydrodipicolina 97.1 0.0011 3.8E-08 64.2 8.2 96 3-109 21-124 (288)
312 1u8f_O GAPDH, glyceraldehyde-3 97.1 0.0013 4.5E-08 65.3 8.7 102 1-106 1-124 (335)
313 1jw9_B Molybdopterin biosynthe 97.1 0.003 1E-07 60.0 10.8 33 4-36 32-65 (249)
314 3hhp_A Malate dehydrogenase; M 97.0 0.0077 2.6E-07 59.1 13.8 97 4-106 1-120 (312)
315 1b7g_O Protein (glyceraldehyde 97.0 0.0038 1.3E-07 62.1 11.7 97 4-107 2-111 (340)
316 2ejw_A HDH, homoserine dehydro 97.0 0.00026 9E-09 70.2 3.2 87 1-103 1-97 (332)
317 1a4i_A Methylenetetrahydrofola 97.0 0.0016 5.4E-08 63.2 8.1 74 4-107 166-240 (301)
318 3l07_A Bifunctional protein fo 97.0 0.0016 5.6E-08 62.7 8.1 74 4-107 162-236 (285)
319 3p2o_A Bifunctional protein fo 97.0 0.0015 5E-08 63.0 7.8 74 4-107 161-235 (285)
320 2b0j_A 5,10-methenyltetrahydro 97.0 0.035 1.2E-06 52.7 16.8 151 53-216 128-280 (358)
321 1b0a_A Protein (fold bifunctio 97.0 0.0015 5E-08 63.0 7.6 74 4-107 160-234 (288)
322 3e5r_O PP38, glyceraldehyde-3- 97.0 0.0023 8E-08 63.5 9.3 100 1-105 1-127 (337)
323 2c2x_A Methylenetetrahydrofola 96.9 0.0015 5E-08 62.8 7.4 74 4-107 159-235 (281)
324 3lk7_A UDP-N-acetylmuramoylala 96.9 0.0059 2E-07 63.2 12.5 115 4-125 10-141 (451)
325 3g0o_A 3-hydroxyisobutyrate de 96.9 0.013 4.6E-07 57.0 14.1 103 321-438 172-274 (303)
326 3tum_A Shikimate dehydrogenase 96.9 0.0024 8.3E-08 61.3 8.6 117 4-127 126-246 (269)
327 1xyg_A Putative N-acetyl-gamma 96.9 0.0021 7.2E-08 64.5 8.4 96 2-107 15-115 (359)
328 1cf2_P Protein (glyceraldehyde 96.9 0.0029 9.9E-08 62.9 9.2 97 4-107 2-112 (337)
329 1hdo_A Biliverdin IX beta redu 96.9 0.0018 6.2E-08 58.5 7.2 72 1-79 1-77 (206)
330 1ys4_A Aspartate-semialdehyde 96.9 0.001 3.4E-08 66.8 5.8 94 3-107 8-117 (354)
331 2ozp_A N-acetyl-gamma-glutamyl 96.9 0.0014 4.9E-08 65.4 6.9 98 1-107 1-102 (345)
332 4dll_A 2-hydroxy-3-oxopropiona 96.9 0.016 5.6E-07 56.9 14.5 104 321-439 192-295 (320)
333 4a5o_A Bifunctional protein fo 96.8 0.0025 8.5E-08 61.4 8.0 74 4-107 162-236 (286)
334 1lnq_A MTHK channels, potassiu 96.8 0.003 1E-07 62.6 8.7 113 4-129 116-231 (336)
335 2nqt_A N-acetyl-gamma-glutamyl 96.8 0.0007 2.4E-08 67.7 4.1 97 1-108 7-114 (352)
336 3ew7_A LMO0794 protein; Q8Y8U8 96.8 0.0034 1.2E-07 57.4 8.6 69 4-79 1-71 (221)
337 3dr3_A N-acetyl-gamma-glutamyl 96.8 0.0015 5E-08 64.9 6.1 98 3-107 4-109 (337)
338 3keo_A Redox-sensing transcrip 96.8 0.00045 1.5E-08 63.9 2.1 81 4-92 85-170 (212)
339 1p9l_A Dihydrodipicolinate red 96.7 0.022 7.5E-07 53.8 13.8 98 4-129 1-103 (245)
340 3e8x_A Putative NAD-dependent 96.7 0.0031 1E-07 58.8 7.8 71 3-79 21-94 (236)
341 3pef_A 6-phosphogluconate dehy 96.7 0.011 3.7E-07 57.1 11.9 104 321-439 164-267 (287)
342 2yyy_A Glyceraldehyde-3-phosph 96.7 0.0069 2.4E-07 60.3 10.4 97 3-105 2-114 (343)
343 2dt5_A AT-rich DNA-binding pro 96.7 0.00031 1.1E-08 65.1 0.6 79 4-91 81-161 (211)
344 4h7p_A Malate dehydrogenase; s 96.7 0.015 5E-07 57.9 12.5 101 2-105 23-151 (345)
345 3h2s_A Putative NADH-flavin re 96.6 0.0068 2.3E-07 55.6 9.4 69 4-79 1-72 (224)
346 3h8v_A Ubiquitin-like modifier 96.6 0.007 2.4E-07 58.8 9.3 127 4-132 37-172 (292)
347 3dhn_A NAD-dependent epimerase 96.5 0.0036 1.2E-07 57.7 6.6 71 1-79 1-77 (227)
348 1qyd_A Pinoresinol-lariciresin 96.5 0.0084 2.9E-07 58.1 9.4 75 1-79 1-86 (313)
349 3pdu_A 3-hydroxyisobutyrate de 96.5 0.028 9.7E-07 54.1 12.9 104 321-439 164-267 (287)
350 3dfz_A SIRC, precorrin-2 dehyd 96.5 0.017 6E-07 53.7 10.8 78 4-90 32-111 (223)
351 3i6i_A Putative leucoanthocyan 96.4 0.0079 2.7E-07 59.5 8.9 36 1-36 8-44 (346)
352 1qyc_A Phenylcoumaran benzylic 96.4 0.008 2.7E-07 58.1 8.6 36 1-36 1-38 (308)
353 1zud_1 Adenylyltransferase THI 96.4 0.021 7.3E-07 54.1 11.2 123 4-132 29-153 (251)
354 3u95_A Glycoside hydrolase, fa 96.3 0.0042 1.4E-07 64.7 6.2 71 4-77 1-84 (477)
355 3dqp_A Oxidoreductase YLBE; al 96.2 0.013 4.6E-07 53.6 8.8 70 4-80 1-74 (219)
356 2ep5_A 350AA long hypothetical 96.2 0.0071 2.4E-07 60.4 7.3 98 2-107 3-111 (350)
357 2gas_A Isoflavone reductase; N 96.2 0.032 1.1E-06 53.7 11.4 34 3-36 2-36 (307)
358 1up7_A 6-phospho-beta-glucosid 96.2 0.046 1.6E-06 55.8 12.9 74 3-80 2-84 (417)
359 2tmg_A Protein (glutamate dehy 96.1 0.035 1.2E-06 56.4 11.7 114 4-127 210-336 (415)
360 3hsk_A Aspartate-semialdehyde 96.1 0.0066 2.2E-07 61.2 6.3 97 1-107 17-127 (381)
361 3aog_A Glutamate dehydrogenase 96.1 0.022 7.5E-07 58.2 10.1 115 3-127 235-361 (440)
362 2ph5_A Homospermidine synthase 96.1 0.011 3.7E-07 61.0 7.8 98 4-130 14-115 (480)
363 5mdh_A Malate dehydrogenase; o 96.1 0.029 1E-06 55.5 10.7 100 3-105 3-130 (333)
364 4hv4_A UDP-N-acetylmuramate--L 96.1 0.032 1.1E-06 58.3 11.5 111 4-123 23-149 (494)
365 3tfo_A Putative 3-oxoacyl-(acy 96.0 0.02 6.8E-07 54.6 8.9 87 1-106 1-91 (264)
366 1xgk_A Nitrogen metabolite rep 96.0 0.02 6.7E-07 57.0 9.0 73 3-79 5-83 (352)
367 1hye_A L-lactate/malate dehydr 95.9 0.055 1.9E-06 53.0 12.0 71 4-78 1-83 (313)
368 3kkj_A Amine oxidase, flavin-c 95.9 0.0063 2.1E-07 56.1 4.9 35 1-36 1-35 (336)
369 4dpk_A Malonyl-COA/succinyl-CO 95.9 0.0099 3.4E-07 59.5 6.2 92 4-107 8-113 (359)
370 4dpl_A Malonyl-COA/succinyl-CO 95.9 0.0099 3.4E-07 59.5 6.2 92 4-107 8-113 (359)
371 3cps_A Glyceraldehyde 3-phosph 95.8 0.042 1.4E-06 54.7 10.7 96 3-105 17-139 (354)
372 3gpi_A NAD-dependent epimerase 95.8 0.0078 2.7E-07 57.7 5.2 38 1-38 1-38 (286)
373 1lu9_A Methylene tetrahydromet 95.8 0.034 1.2E-06 53.6 9.8 42 4-45 120-162 (287)
374 4gx0_A TRKA domain protein; me 95.8 0.0078 2.7E-07 64.0 5.7 111 4-129 349-462 (565)
375 3aoe_E Glutamate dehydrogenase 95.8 0.052 1.8E-06 55.2 11.4 110 4-127 219-340 (419)
376 3doj_A AT3G25530, dehydrogenas 95.8 0.1 3.4E-06 50.9 13.1 104 321-439 184-287 (310)
377 3l6e_A Oxidoreductase, short-c 95.8 0.042 1.4E-06 51.2 9.8 44 1-44 1-45 (235)
378 1y7t_A Malate dehydrogenase; N 95.7 0.069 2.3E-06 52.5 11.7 75 1-78 1-89 (327)
379 1vkn_A N-acetyl-gamma-glutamyl 95.7 0.04 1.4E-06 54.8 9.9 95 3-107 13-110 (351)
380 2dvm_A Malic enzyme, 439AA lon 95.7 0.029 9.9E-07 57.5 8.9 111 4-126 187-315 (439)
381 3c1o_A Eugenol synthase; pheny 95.7 0.033 1.1E-06 54.1 9.2 34 3-36 4-38 (321)
382 3hn7_A UDP-N-acetylmuramate-L- 95.7 0.061 2.1E-06 56.6 11.7 113 3-123 19-149 (524)
383 2yfq_A Padgh, NAD-GDH, NAD-spe 95.7 0.024 8.2E-07 57.8 8.1 114 4-127 213-343 (421)
384 3sju_A Keto reductase; short-c 95.6 0.027 9.3E-07 54.0 8.2 83 5-106 26-111 (279)
385 3qha_A Putative oxidoreductase 95.5 0.046 1.6E-06 53.0 9.5 102 321-438 174-284 (296)
386 2r6j_A Eugenol synthase 1; phe 95.5 0.036 1.2E-06 53.9 8.7 73 4-78 12-88 (318)
387 2r00_A Aspartate-semialdehyde 95.5 0.0047 1.6E-07 61.4 2.3 92 1-107 1-99 (336)
388 3slg_A PBGP3 protein; structur 95.5 0.0072 2.5E-07 60.2 3.5 42 1-42 22-65 (372)
389 3l6d_A Putative oxidoreductase 95.5 0.046 1.6E-06 53.2 9.3 101 322-439 174-275 (306)
390 1xq6_A Unknown protein; struct 95.4 0.025 8.6E-07 52.5 7.0 72 1-78 2-78 (253)
391 1ebf_A Homoserine dehydrogenas 95.4 0.014 4.8E-07 58.4 5.2 34 3-36 4-42 (358)
392 3hm2_A Precorrin-6Y C5,15-meth 95.4 0.14 4.8E-06 44.6 11.4 120 4-128 27-150 (178)
393 4b4u_A Bifunctional protein fo 95.4 0.039 1.3E-06 53.3 8.1 73 4-106 180-253 (303)
394 3pwk_A Aspartate-semialdehyde 95.4 0.0072 2.5E-07 60.6 3.1 92 3-107 2-98 (366)
395 3e48_A Putative nucleoside-dip 95.4 0.029 9.8E-07 53.7 7.3 72 4-80 1-76 (289)
396 2hjs_A USG-1 protein homolog; 95.4 0.0099 3.4E-07 59.1 4.1 90 3-107 6-102 (340)
397 2csu_A 457AA long hypothetical 95.4 0.021 7.2E-07 59.1 6.7 108 3-127 8-126 (457)
398 3njr_A Precorrin-6Y methylase; 95.3 0.21 7.3E-06 45.2 12.8 119 4-128 57-177 (204)
399 4hb9_A Similarities with proba 95.3 0.012 4E-07 59.1 4.6 34 4-37 2-35 (412)
400 2x5o_A UDP-N-acetylmuramoylala 95.3 0.057 2E-06 55.4 9.9 114 3-125 5-133 (439)
401 1t4b_A Aspartate-semialdehyde 95.3 0.053 1.8E-06 54.4 9.3 91 4-106 2-100 (367)
402 2a9f_A Putative malic enzyme ( 95.3 0.023 7.9E-07 57.1 6.5 100 4-111 189-296 (398)
403 2wm3_A NMRA-like family domain 95.3 0.036 1.2E-06 53.3 7.7 71 3-78 5-81 (299)
404 3ged_A Short-chain dehydrogena 95.3 0.051 1.7E-06 51.4 8.5 80 5-105 4-84 (247)
405 4gx0_A TRKA domain protein; me 95.2 0.067 2.3E-06 56.7 10.3 96 4-105 128-226 (565)
406 4fn4_A Short chain dehydrogena 95.2 0.053 1.8E-06 51.5 8.5 82 5-105 8-93 (254)
407 4g81_D Putative hexonate dehyd 95.2 0.051 1.7E-06 51.6 8.2 82 5-105 10-95 (255)
408 1tt5_A APPBP1, amyloid protein 95.1 0.047 1.6E-06 57.4 8.6 125 4-132 33-159 (531)
409 3rui_A Ubiquitin-like modifier 95.1 0.097 3.3E-06 51.7 10.3 124 4-129 35-171 (340)
410 3m2p_A UDP-N-acetylglucosamine 95.1 0.014 4.9E-07 56.5 4.4 70 3-79 2-72 (311)
411 4fgs_A Probable dehydrogenase 95.1 0.074 2.5E-06 51.0 9.2 80 5-104 30-111 (273)
412 1y1p_A ARII, aldehyde reductas 95.1 0.13 4.6E-06 49.9 11.3 42 3-44 11-53 (342)
413 3o38_A Short chain dehydrogena 95.0 0.073 2.5E-06 50.3 8.9 85 4-106 23-111 (266)
414 2q3e_A UDP-glucose 6-dehydroge 95.0 0.12 4.2E-06 53.4 11.3 114 4-129 330-464 (467)
415 3ruf_A WBGU; rossmann fold, UD 95.0 0.05 1.7E-06 53.5 8.0 36 2-37 24-60 (351)
416 4eso_A Putative oxidoreductase 95.0 0.079 2.7E-06 50.0 8.9 40 5-44 10-50 (255)
417 3op4_A 3-oxoacyl-[acyl-carrier 95.0 0.12 4E-06 48.5 10.1 81 6-106 12-93 (248)
418 2zcu_A Uncharacterized oxidore 95.0 0.08 2.7E-06 50.2 9.1 69 5-78 1-74 (286)
419 2d8a_A PH0655, probable L-thre 94.9 0.06 2.1E-06 53.3 8.4 43 4-46 169-212 (348)
420 4a7p_A UDP-glucose dehydrogena 94.9 0.049 1.7E-06 56.1 7.8 109 4-129 323-441 (446)
421 2x4g_A Nucleoside-diphosphate- 94.9 0.031 1E-06 54.7 6.1 71 3-78 13-86 (342)
422 3oid_A Enoyl-[acyl-carrier-pro 94.9 0.07 2.4E-06 50.4 8.4 86 1-105 1-91 (258)
423 2gn4_A FLAA1 protein, UDP-GLCN 94.9 0.088 3E-06 52.0 9.4 42 3-44 21-65 (344)
424 2d2i_A Glyceraldehyde 3-phosph 94.9 0.11 3.9E-06 52.0 10.1 41 4-44 3-48 (380)
425 3b1j_A Glyceraldehyde 3-phosph 94.9 0.11 3.9E-06 51.3 10.0 40 4-43 3-47 (339)
426 1vpd_A Tartronate semialdehyde 94.8 0.43 1.5E-05 45.7 14.0 103 321-438 168-270 (299)
427 3k92_A NAD-GDH, NAD-specific g 94.8 0.047 1.6E-06 55.4 7.1 174 4-221 222-408 (424)
428 3h5n_A MCCB protein; ubiquitin 94.8 0.19 6.5E-06 50.0 11.5 124 4-132 119-244 (353)
429 3osu_A 3-oxoacyl-[acyl-carrier 94.7 0.1 3.5E-06 48.7 9.1 87 1-106 1-92 (246)
430 3qiv_A Short-chain dehydrogena 94.7 0.099 3.4E-06 48.9 8.9 84 4-106 10-96 (253)
431 3awd_A GOX2181, putative polyo 94.7 0.11 3.7E-06 48.7 9.2 41 4-44 14-55 (260)
432 3e05_A Precorrin-6Y C5,15-meth 94.7 0.25 8.6E-06 44.4 11.4 116 4-123 42-160 (204)
433 3f1l_A Uncharacterized oxidore 94.7 0.17 5.9E-06 47.4 10.5 86 5-106 14-102 (252)
434 3rkr_A Short chain oxidoreduct 94.7 0.086 2.9E-06 49.8 8.5 83 5-106 31-116 (262)
435 3imf_A Short chain dehydrogena 94.7 0.069 2.4E-06 50.3 7.7 83 4-105 7-92 (257)
436 2x5j_O E4PDH, D-erythrose-4-ph 94.7 0.11 3.8E-06 51.4 9.4 97 4-105 3-126 (339)
437 2qrj_A Saccharopine dehydrogen 94.7 0.023 7.8E-07 57.3 4.4 83 3-106 214-302 (394)
438 1yqd_A Sinapyl alcohol dehydro 94.7 0.079 2.7E-06 52.9 8.5 95 4-105 189-283 (366)
439 7mdh_A Protein (malate dehydro 94.7 0.14 4.7E-06 51.4 10.1 104 4-112 33-164 (375)
440 1yb1_A 17-beta-hydroxysteroid 94.7 0.12 4.3E-06 48.9 9.5 84 4-106 32-118 (272)
441 3dii_A Short-chain dehydrogena 94.6 0.09 3.1E-06 49.2 8.3 81 4-105 3-84 (247)
442 3a06_A 1-deoxy-D-xylulose 5-ph 94.6 0.19 6.3E-06 49.9 10.7 118 1-127 1-140 (376)
443 1fmc_A 7 alpha-hydroxysteroid 94.6 0.089 3E-06 49.1 8.3 41 4-44 12-53 (255)
444 3n74_A 3-ketoacyl-(acyl-carrie 94.6 0.15 5.3E-06 47.8 10.0 83 4-106 10-93 (261)
445 4gsl_A Ubiquitin-like modifier 94.6 0.12 4.3E-06 54.7 9.9 124 4-129 327-463 (615)
446 3ftp_A 3-oxoacyl-[acyl-carrier 94.6 0.13 4.3E-06 49.0 9.3 85 5-106 29-115 (270)
447 3i1j_A Oxidoreductase, short c 94.5 0.16 5.4E-06 47.2 9.8 86 5-106 16-104 (247)
448 3lyl_A 3-oxoacyl-(acyl-carrier 94.5 0.12 4.1E-06 48.1 8.9 84 4-106 6-92 (247)
449 2jl1_A Triphenylmethane reduct 94.5 0.05 1.7E-06 51.7 6.4 70 4-78 1-75 (287)
450 1hdc_A 3-alpha, 20 beta-hydrox 94.5 0.17 5.7E-06 47.5 10.0 85 2-106 4-89 (254)
451 4e6p_A Probable sorbitol dehyd 94.5 0.18 6.3E-06 47.3 10.3 83 4-106 9-92 (259)
452 1pl8_A Human sorbitol dehydrog 94.5 0.28 9.7E-06 48.5 12.1 43 4-46 173-216 (356)
453 3tox_A Short chain dehydrogena 94.5 0.052 1.8E-06 52.1 6.4 82 6-106 11-95 (280)
454 2ehd_A Oxidoreductase, oxidore 94.5 0.14 4.8E-06 47.1 9.2 40 5-44 7-47 (234)
455 3guy_A Short-chain dehydrogena 94.5 0.072 2.5E-06 49.2 7.2 41 4-44 2-43 (230)
456 4g65_A TRK system potassium up 94.5 0.16 5.6E-06 52.4 10.5 99 4-106 236-336 (461)
457 2h78_A Hibadh, 3-hydroxyisobut 94.4 0.2 6.7E-06 48.4 10.5 106 321-439 166-276 (302)
458 2jah_A Clavulanic acid dehydro 94.4 0.14 4.9E-06 47.8 9.2 83 4-105 8-93 (247)
459 2bka_A CC3, TAT-interacting pr 94.4 0.02 6.8E-07 53.2 3.2 37 3-39 18-57 (242)
460 1pqw_A Polyketide synthase; ro 94.4 0.066 2.3E-06 48.2 6.6 40 4-43 40-80 (198)
461 4e3z_A Putative oxidoreductase 94.4 0.12 4.1E-06 49.0 8.6 84 4-106 26-114 (272)
462 3ip1_A Alcohol dehydrogenase, 94.4 0.23 7.7E-06 50.2 11.2 43 4-46 215-258 (404)
463 1oc2_A DTDP-glucose 4,6-dehydr 94.3 0.1 3.4E-06 51.1 8.3 36 1-36 1-40 (348)
464 3ucx_A Short chain dehydrogena 94.3 0.14 4.8E-06 48.4 9.0 82 5-105 13-97 (264)
465 3tpc_A Short chain alcohol deh 94.3 0.1 3.5E-06 49.0 8.0 83 5-107 9-92 (257)
466 3r1i_A Short-chain type dehydr 94.3 0.15 5E-06 48.7 9.2 86 4-106 33-119 (276)
467 1wma_A Carbonyl reductase [NAD 94.3 0.12 3.9E-06 48.7 8.4 86 4-106 5-92 (276)
468 1cyd_A Carbonyl reductase; sho 94.3 0.11 3.9E-06 48.0 8.2 41 4-44 8-49 (244)
469 3two_A Mannitol dehydrogenase; 94.3 0.081 2.8E-06 52.3 7.6 91 4-107 178-268 (348)
470 1geg_A Acetoin reductase; SDR 94.3 0.14 4.8E-06 48.0 8.9 82 5-105 4-88 (256)
471 1nff_A Putative oxidoreductase 94.3 0.22 7.5E-06 46.9 10.2 83 4-106 8-91 (260)
472 3d3w_A L-xylulose reductase; u 94.2 0.12 4.1E-06 47.9 8.2 41 4-44 8-49 (244)
473 2rhc_B Actinorhodin polyketide 94.2 0.17 5.9E-06 48.1 9.5 40 5-44 24-64 (277)
474 2pd6_A Estradiol 17-beta-dehyd 94.2 0.2 7E-06 46.9 9.9 41 4-44 8-49 (264)
475 2wsb_A Galactitol dehydrogenas 94.2 0.25 8.4E-06 46.0 10.4 40 5-44 13-53 (254)
476 1hdg_O Holo-D-glyceraldehyde-3 94.2 0.17 5.7E-06 49.9 9.4 97 4-105 1-123 (332)
477 3m1a_A Putative dehydrogenase; 94.2 0.12 4.2E-06 49.1 8.3 83 4-106 6-89 (281)
478 1uuf_A YAHK, zinc-type alcohol 94.2 0.18 6.3E-06 50.3 9.9 94 4-106 196-290 (369)
479 2ae2_A Protein (tropinone redu 94.2 0.19 6.3E-06 47.3 9.5 84 4-106 10-97 (260)
480 3ak4_A NADH-dependent quinucli 94.1 0.24 8E-06 46.6 10.1 41 4-44 13-54 (263)
481 3ai3_A NADPH-sorbose reductase 94.1 0.18 6.2E-06 47.4 9.3 41 4-44 8-49 (263)
482 1uls_A Putative 3-oxoacyl-acyl 94.1 0.26 8.7E-06 46.0 10.2 81 4-106 6-87 (245)
483 1yvv_A Amine oxidase, flavin-c 94.1 0.043 1.5E-06 53.4 4.9 34 3-36 2-35 (336)
484 1gad_O D-glyceraldehyde-3-phos 94.0 0.15 5E-06 50.3 8.6 100 4-107 2-122 (330)
485 4dyv_A Short-chain dehydrogena 94.0 0.23 7.9E-06 47.3 9.9 82 5-106 29-112 (272)
486 3cxt_A Dehydrogenase with diff 94.0 0.23 7.9E-06 47.8 10.0 86 4-106 35-121 (291)
487 2f00_A UDP-N-acetylmuramate--L 94.0 0.26 8.8E-06 51.3 10.9 109 4-123 20-146 (491)
488 2zat_A Dehydrogenase/reductase 94.0 0.16 5.5E-06 47.7 8.6 40 5-44 16-56 (260)
489 1w6u_A 2,4-dienoyl-COA reducta 94.0 0.21 7.2E-06 47.9 9.6 85 4-106 27-114 (302)
490 3gg2_A Sugar dehydrogenase, UD 94.0 0.15 5.2E-06 52.5 9.0 108 4-129 319-436 (450)
491 2gdz_A NAD+-dependent 15-hydro 94.0 0.19 6.4E-06 47.5 9.1 85 5-106 9-96 (267)
492 4dry_A 3-oxoacyl-[acyl-carrier 94.0 0.21 7.2E-06 47.7 9.5 84 6-106 36-121 (281)
493 1iy8_A Levodione reductase; ox 94.0 0.21 7.3E-06 47.1 9.5 86 4-106 14-102 (267)
494 1p3d_A UDP-N-acetylmuramate--a 94.0 0.25 8.6E-06 51.1 10.7 111 4-123 19-145 (475)
495 3s2e_A Zinc-containing alcohol 94.0 0.077 2.6E-06 52.2 6.6 43 4-46 168-210 (340)
496 1zem_A Xylitol dehydrogenase; 94.0 0.18 6.1E-06 47.5 8.9 84 4-106 8-94 (262)
497 1v9l_A Glutamate dehydrogenase 94.0 0.066 2.3E-06 54.4 6.1 115 4-127 211-342 (421)
498 2cfc_A 2-(R)-hydroxypropyl-COM 93.9 0.21 7.1E-06 46.4 9.3 41 4-44 3-44 (250)
499 2uvd_A 3-oxoacyl-(acyl-carrier 93.9 0.2 6.8E-06 46.7 9.1 84 4-106 5-92 (246)
500 1vm6_A DHPR, dihydrodipicolina 93.9 0.24 8.1E-06 45.9 9.2 95 4-131 13-110 (228)
No 1
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=100.00 E-value=5.8e-113 Score=895.67 Aligned_cols=475 Identities=48% Similarity=0.844 Sum_probs=441.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCC
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAG 80 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 80 (484)
|.+|+|||||+|.||.+||.+|+++||+|++|||++++++.+.+.+.. +.++..+.+++++++.++.+|+||+|||++
T Consensus 2 ~~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~--g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~ 79 (484)
T 4gwg_A 2 NAQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAK--GTKVVGAQSLKEMVSKLKKPRRIILLVKAG 79 (484)
T ss_dssp -CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTT--TSSCEECSSHHHHHHTBCSSCEEEECSCSS
T ss_pred CCCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccC--CCceeccCCHHHHHhhccCCCEEEEecCCh
Confidence 556799999999999999999999999999999999999998875422 113556789999999777899999999998
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCCccccCCCHHHHHHHHHHHH
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILL 160 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll~ 160 (484)
.+++++++++.+.+++|++|||+||+.|.++.++.+.+.++|++|+++||+||+.+++.|+++|+||+++++++++++|+
T Consensus 80 ~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~~gA~~G~~im~GG~~ea~~~v~pll~ 159 (484)
T 4gwg_A 80 QAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGPSLMPGGNKEAWPHIKTIFQ 159 (484)
T ss_dssp HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEEEEEECGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCHHHHhcCCeeecCCCHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHH-hCCCCHHHHHHHHHhhccCcchhhhhhhhc
Q 011501 161 KVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKS-VGKLSNEELQQVFSEWNKGELLSFLIEITA 239 (484)
Q Consensus 161 ~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~-~g~~~~~~i~~~~~~~~~g~~~s~l~~~~~ 239 (484)
.++.++.+++||++|+|+.|+||++||+||+++++++++++|++.++++ .| +|++++.++|+.|+.|.+.||+++++.
T Consensus 160 ~ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~G-ld~~~l~~v~~~w~~G~~~S~l~e~~~ 238 (484)
T 4gwg_A 160 GIAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLG-MAQDEMAQAFEDWNKTELDSFLIEITA 238 (484)
T ss_dssp HHSCBCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC-CCHHHHHHHHHHHTTTTTCBHHHHHHH
T ss_pred HhcCcccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHcCCCccchHHHHHH
Confidence 9999865788999999999999999999999999999999999999999 87 999999999999999999999999999
Q ss_pred cccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHhcCchHHHHHHHhccCCCCCCccccc
Q 011501 240 DIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQ 319 (484)
Q Consensus 240 ~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s~~~~~r~~~~~~~~~~~~~~~~~~~ 319 (484)
+++..+| +.+++++|.|+|.++|||||+||+++|.++|||+|+|++||++|++|++|++|..+++.|++|.+. ..
T Consensus 239 ~~l~~~D-~~g~~~ld~i~d~~~~kgtG~wt~~~A~~~gvp~p~i~~av~~R~~S~~k~~r~~a~~~l~~~~~~----~~ 313 (484)
T 4gwg_A 239 NILKFQD-TDGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSSLKDERIQASKKLKGPQKF----QF 313 (484)
T ss_dssp HHHHCBC-TTSSBSGGGSCCCCCSSCTTHHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHHHHHHTTCCCC--C----CC
T ss_pred HHHhcCC-ccCCccHHHHhccccCcchHHHHHHHHHHcCCCchHHHHHHHHHHHhhchHHHHHHHhhcCCCCcc----cc
Confidence 9998765 456789999999999999999999999999999999999999999999999999999999887532 23
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHccCCCCCCcccc
Q 011501 320 TVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVD 399 (484)
Q Consensus 320 ~~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~Gcii~s~ll~~i~~~~~~~~~~~~ll~~ 399 (484)
..+..+|++|||||+||++|++|+|||+||++++++|+|++|+.+|+++||+||||||+||+.|.++|++||+++|||+|
T Consensus 314 ~~~~~~~~~~~~~al~~~~i~~yaqGf~ll~~as~~~~w~l~~~~ia~iwr~GciIrs~~l~~i~~a~~~~~~l~~ll~~ 393 (484)
T 4gwg_A 314 DGDKKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFDRNPELQNLLLD 393 (484)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSTTCTTCBHHHHHHHHHHHHCTTCSCGGGS
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHccCceeHHHHHHHHHHHHHhCCCchhhhcC
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHhhcCCCcchhHHHHHhhccCCccceeccCCCc-cccccccC
Q 011501 400 PEFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERVDMSGS-FHTEWFKI 478 (484)
Q Consensus 400 ~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~~~~~~~~~~~~~~~i~a~rd~fG~h~~~r~d~~~~-~h~~w~~~ 478 (484)
+.|.+.+++..++||+||..|++.|+|+|++|+||+||++||++++|+|||||||||||+|||+|+|++|. ||++|+++
T Consensus 394 ~~f~~~~~~~~~~~r~vv~~a~~~gip~P~~s~al~y~~~~r~~~lpanliqaqRd~FGaH~~~r~d~~g~~~h~~w~~~ 473 (484)
T 4gwg_A 394 DFFKSAVENCQDSWRRAVSTGVQAGIPMPCFTTALSFYDGYRHEMLPASLIQAQRDYFGAHTYELLAKPGQFIHTNWTGH 473 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTCSCCTHHHHHHHHHHHHCCCEEETTEEEEEECCCCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhccCCCHHHHHHHHHHhhCCcceEecCCCCCccccCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999995 89999975
Q ss_pred CccCC
Q 011501 479 AKQSK 483 (484)
Q Consensus 479 ~~~~~ 483 (484)
+.+++
T Consensus 474 ~~~~~ 478 (484)
T 4gwg_A 474 GGTVS 478 (484)
T ss_dssp -----
T ss_pred CCCcc
Confidence 55543
No 2
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-103 Score=830.22 Aligned_cols=470 Identities=49% Similarity=0.873 Sum_probs=435.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHH-HhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE-RAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~-~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
.+|||||+|.||.+||.+|+++|++|++|||++++++.+.+ .... .++..+.+++++++.++++|+||+|||++.+
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~---~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~ 87 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKG---KSIIGATSIEDFISKLKRPRKVMLLVKAGAP 87 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTT---SSEECCSSHHHHHHTSCSSCEEEECCCSSHH
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccC---CCeEEeCCHHHHHhcCCCCCEEEEEcCChHH
Confidence 58999999999999999999999999999999999998876 3110 1367788999999877789999999999889
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCCccccCCCHHHHHHHHHHHHHH
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKV 162 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll~~i 162 (484)
++++++++.+.+++|++|||+||+.+.++.++.+.+.++|++|+++||+|++.++..|+++|+||++++++.++++|+.+
T Consensus 88 v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsgg~~~a~~G~~im~gg~~e~~~~v~~ll~~~ 167 (497)
T 2p4q_A 88 VDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSGGEEGARYGPSLMPGGSEEAWPHIKNIFQSI 167 (497)
T ss_dssp HHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEEEEEECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcccChhHhhcCCeEEecCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999998988999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHH-hCCCCHHHHHHHHHhhccCcchhhhhhhhccc
Q 011501 163 AAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKS-VGKLSNEELQQVFSEWNKGELLSFLIEITADI 241 (484)
Q Consensus 163 ~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~-~g~~~~~~i~~~~~~~~~g~~~s~l~~~~~~~ 241 (484)
+.+. |++||+.++|+.|+|+++||++|++.++.+++++|++.++++ .| ++++++.+++..|+.|.+.||+++++.++
T Consensus 168 g~~~-dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lG-l~~~~~~~~~~~w~~g~~~S~l~~~~~~~ 245 (497)
T 2p4q_A 168 SAKS-DGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGG-FTDKEISDVFAKWNNGVLDSFLVEITRDI 245 (497)
T ss_dssp SCEE-TTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCHHHHHHHHHHHHTTTTCBHHHHHHHHH
T ss_pred cCcc-CCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHHhcCCccccHHHHHHHHH
Confidence 9864 567899999999999999999999999999999999999999 58 99999999999999999999999999888
Q ss_pred cccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHhcCchHHHHHHHhccCCCC-CCcccccc
Q 011501 242 FGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSGLKEERVEAAKVFRSSGI-GDVLAEQT 320 (484)
Q Consensus 242 l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s~~~~~r~~~~~~~~~~~~-~~~~~~~~ 320 (484)
+..+| +++.|.++.+.|.++||+||+|+++.|.++|+|+|++..+|++|++|.++++|..+++++.+|.. . ...
T Consensus 246 l~~~d-~~~~~~vd~i~D~~~~KgtG~~~~~~A~~~Gv~~P~~~~av~ar~~s~~k~~r~~~~~~~~gp~~~~----~~~ 320 (497)
T 2p4q_A 246 LKFDD-VDGKPLVEKIMDTAGQKGTGKWTAINALDLGMPVTLIGEAVFARCLSALKNERIRASKVLPGPEVPK----DAV 320 (497)
T ss_dssp HTCBC-TTSSBGGGGSCCCCCCCSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCT----TSC
T ss_pred HhcCC-CCCccHHHHHHHhhccchHHHHHHHHHHHcCCCCchHHHHHHHHHhhcchhhHHHHhhhcCCCCccc----ccc
Confidence 77654 56679999999999999999999999999999999999999999999999999999999988752 1 233
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHccCCCCCCcccch
Q 011501 321 VDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDP 400 (484)
Q Consensus 321 ~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~Gcii~s~ll~~i~~~~~~~~~~~~ll~~~ 400 (484)
.+++||+|||||||||++|++|+|||+||++++++|+|++|+.+|+++||+||||||+||+.|.++|+++|+|+|||+|+
T Consensus 321 ~~~~~~~~~v~~al~~~~i~syaqGf~ll~~as~~~~w~l~~~~ia~iwr~GciIrs~~l~~i~~a~~~~~~l~~l~~~~ 400 (497)
T 2p4q_A 321 KDREQFVDDLEQALYASKIISYAQGFMLIREAAATYGWKLNNPAIALMWRGGCIIRSVFLGQITKAYREEPDLENLLFNK 400 (497)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHSSSTTCBHHHHHHHHHHHHCTTCSCGGGSH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCchHHHHHHHHHHHHhcCCChhhhhcCH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHhhcCCCcchhHHHHHhhccCCccceec--------cCCCccc
Q 011501 401 EFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERV--------DMSGSFH 472 (484)
Q Consensus 401 ~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~~~~~~~~~~~~~~~i~a~rd~fG~h~~~r~--------d~~~~~h 472 (484)
.|.+.+++..++|||||..|++.|||+|++++||+||++||++++|+|||||||||||+|||+|+ |++|.||
T Consensus 401 ~f~~~~~~~~~~~r~~v~~a~~~gvp~P~~s~aL~~~~~~~~~~~~a~liqa~Rd~FG~H~~~r~~~~~~~~~~~~~~~h 480 (497)
T 2p4q_A 401 FFADAVTKAQSGWRKSIALATTYGIPTPAFSTALSFYDGYRSERLPANLLQAQRDYFGAHTFRVLPECASDNLPVDKDIH 480 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTCSSCTHHHHHHHHHHHSCCCBCCCGGGCCSSSCTTSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccCCchhHHHHHHHHhcCCcceeeccccccccCCCCCeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred cccccCCccCC
Q 011501 473 TEWFKIAKQSK 483 (484)
Q Consensus 473 ~~w~~~~~~~~ 483 (484)
++|++++.+++
T Consensus 481 ~~w~~~~~~~~ 491 (497)
T 2p4q_A 481 INWTGHGGNVS 491 (497)
T ss_dssp CCCC-------
T ss_pred cccCCCCCccc
Confidence 99987555543
No 3
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=100.00 E-value=4.6e-103 Score=825.87 Aligned_cols=467 Identities=51% Similarity=0.889 Sum_probs=436.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCC
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAG 80 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 80 (484)
|++++|||||+|.||.+||.+|+++|++|++|||++++++++.+..... ++..+.+++++++.++++|+||+|||++
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~---gi~~~~s~~e~v~~l~~aDvVil~Vp~~ 89 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGK---KLVPYYTVKEFVESLETPRRILLMVKAG 89 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTS---CEEECSSHHHHHHTBCSSCEEEECSCSS
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCC---CeEEeCCHHHHHhCCCCCCEEEEECCCH
Confidence 6678999999999999999999999999999999999999887652101 3677889999998777799999999998
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCCccccCCCHHHHHHHHHHHH
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILL 160 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll~ 160 (484)
.+++++++++.+.+++|++|||++|+.+.++.++.+.+.++|++|+++|++||+..++.|+++|+||++++++.++++|+
T Consensus 90 ~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll~ 169 (480)
T 2zyd_A 90 AGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILT 169 (480)
T ss_dssp SHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccccCHhHHhcCCeEEecCCHHHHHHHHHHHH
Confidence 78999999999999999999999999999999998888888999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHH-hCCCCHHHHHHHHHhhccCcchhhhhhhhc
Q 011501 161 KVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKS-VGKLSNEELQQVFSEWNKGELLSFLIEITA 239 (484)
Q Consensus 161 ~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~-~g~~~~~~i~~~~~~~~~g~~~s~l~~~~~ 239 (484)
.++.+..|++||+.++|+.|+|+++||++|++.++.+++++|++.++++ .| ++++++.+++..|+.|.+.|++++++.
T Consensus 170 ~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lG-l~~~~~~~l~~~w~~g~~~s~l~~~~~ 248 (480)
T 2zyd_A 170 KIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLN-LTNEELAQTFTEWNNGELSSYLIDITK 248 (480)
T ss_dssp HHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHTTTCBHHHHHHH
T ss_pred HHhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHhcCCCcccHHHHHHH
Confidence 9998644688999999999999999999999999999999999999999 68 999999999999999999999999999
Q ss_pred cccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHhcCchHHHHHHHhccCCCCCCccccc
Q 011501 240 DIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQ 319 (484)
Q Consensus 240 ~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s~~~~~r~~~~~~~~~~~~~~~~~~~ 319 (484)
++++.++ +++++.++.+.|.+.||+||+|+.+.|.++|+|+|++.+++++|++|.++++|..+++++.+|.. ..
T Consensus 249 ~~l~~~d-~~~~~~v~~i~D~~~~k~tG~~~~~~A~~~gv~~Pi~~~av~ar~~s~~k~~R~~~~~~~~g~~~-----~~ 322 (480)
T 2zyd_A 249 DIFTKKD-EDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKDQRVAASKVLSGPQA-----QP 322 (480)
T ss_dssp HHHHCBC-TTSSBGGGGBCCCCCCCSCTTHHHHHHHHHTCCCHHHHHHHHHHHHHTCHHHHHHHHTTCCCCCC-----CC
T ss_pred HHHhcCC-CCCcchHHHHHHHhcCchHHHHHHHHHHHcCCCCchHHHHHHHHhhhcchhhhHHhhcccCCCCC-----CC
Confidence 9887654 56679999999988999999999999999999999999999999999999999999999988753 23
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHccCCCCCCcccc
Q 011501 320 TVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVD 399 (484)
Q Consensus 320 ~~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~Gcii~s~ll~~i~~~~~~~~~~~~ll~~ 399 (484)
..+++||+|||||||||++|++|+|||+||++++++|+|++|+.+|+++||+||||||+||+.|.++|+++|+|+|||+|
T Consensus 323 ~~~~~~~~~~v~~al~~~~~~syaqGf~ll~~as~~~~w~l~~~~ia~iwr~GciIrs~~l~~i~~a~~~~~~l~~l~~~ 402 (480)
T 2zyd_A 323 AGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDACAENPQIANLLLA 402 (480)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSSSSTTCBTHHHHHHHHHHHCTTCSCGGGS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCcchHHHHHHHHHHHHhcCCChHhhhcC
Confidence 45889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHhhcCCCcchhHHHHHhhccCCccceeccCCCcccccccc
Q 011501 400 PEFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERVDMSGSFHTEWFK 477 (484)
Q Consensus 400 ~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~~~~~~~~~~~~~~~i~a~rd~fG~h~~~r~d~~~~~h~~w~~ 477 (484)
+.|.+.+++..++|||||..|++.|+|+|++++||+||++||++++|+|||||||||||+|||+|+|++|.||++|++
T Consensus 403 ~~f~~~~~~~~~~~r~~v~~a~~~gvp~p~~s~al~~~~~~~~~~~~~~l~qa~Rd~FG~H~~~r~~~~~~~h~~w~~ 480 (480)
T 2zyd_A 403 PYFKQIADDYQQALRDVVAYAVQNGIPVPTFSAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRIDKEGVFHTEWLD 480 (480)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTCSSCTHHHHHHHHHHHHCCCBCBSSSCSCBCCCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccCCchhhHHHHHHHhcCCCcceecCCCCcccCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999974
No 4
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=100.00 E-value=2.5e-101 Score=813.51 Aligned_cols=468 Identities=50% Similarity=0.890 Sum_probs=435.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCC
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAG 80 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 80 (484)
|++++|||||+|.||.+||.+|+++|++|.+|||++++++.+.+..... ++..+.+++++++.++++|+||+|||++
T Consensus 3 m~~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~---gi~~~~s~~e~v~~l~~aDvVilavp~~ 79 (474)
T 2iz1_A 3 MAQANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDK---NLVFTKTLEEFVGSLEKPRRIMLMVQAG 79 (474)
T ss_dssp CTTBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTS---CEEECSSHHHHHHTBCSSCEEEECCCTT
T ss_pred CCCCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCC---CeEEeCCHHHHHhhccCCCEEEEEccCc
Confidence 5567899999999999999999999999999999999999887653111 3677889999988777799999999998
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCCccccCCCHHHHHHHHHHHH
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILL 160 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll~ 160 (484)
.+++++++++.+.+++|++|||++|+.+.++.++.+.+.++|++|+++|++|++..+..|+++|+||++++++.++++|+
T Consensus 80 ~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll~ 159 (474)
T 2iz1_A 80 AATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGEKGALLGPSMMPGGQKEAYDLVAPIFE 159 (474)
T ss_dssp HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEECSHHHHHHHCCCEEEEECHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCCCChhhhccCCeEEecCCHHHHHHHHHHHH
Confidence 88999999999999999999999999999998888888888999999999999999999998889999999999999999
Q ss_pred HHhccCC-CCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHH-hCCCCHHHHHHHHHhhccCcchhhhhhhh
Q 011501 161 KVAAQVP-DSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKS-VGKLSNEELQQVFSEWNKGELLSFLIEIT 238 (484)
Q Consensus 161 ~i~~~~~-~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~-~g~~~~~~i~~~~~~~~~g~~~s~l~~~~ 238 (484)
.++.++. +++||+.++|+.|+|+++||++|++.++.+++++|++.++++ .| ++++++.+++..|+.|.+.||+++++
T Consensus 160 ~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~G-l~~~~~~~l~~~w~~g~~~s~l~~~~ 238 (474)
T 2iz1_A 160 QIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILG-LSNAEIQAIFEEWNEGELDSYLIEIT 238 (474)
T ss_dssp HHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC-CCHHHHHHHHHHHTTTTTCBHHHHHH
T ss_pred HHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHhcCCCccccHHHhh
Confidence 9998631 578999999999999999999999999999999999999999 68 99999999999999999999999999
Q ss_pred ccccccccCCCCc-hhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHhcCchHHHHHHHhccCCCCCCccc
Q 011501 239 ADIFGIKDDKGDG-YLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSGLKEERVEAAKVFRSSGIGDVLA 317 (484)
Q Consensus 239 ~~~l~~~~~~~~~-~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s~~~~~r~~~~~~~~~~~~~~~~~ 317 (484)
.+++..+| +.++ +.++.+.|.+.||+||+|+.+.|.++|+|+|++.++|++|++|.+|++|..+++.+.+|..
T Consensus 239 ~~~l~~~d-~~~g~~~vd~i~D~~~~k~tG~~~~~~A~~~gv~~P~~~~av~ar~~s~~k~~r~~~~~~~~g~~~----- 312 (474)
T 2iz1_A 239 KEVLKRKD-DEGEGYIVDKILDKAGNKGTGKWTSESALDLGVPLPLITESVFARYISTYKDERVKASKVLSGPAL----- 312 (474)
T ss_dssp HHHTTCBC-SSSSSBGGGGBCSCCCCCSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCC-----
T ss_pred hhHhhcCC-CCCChhHHHHHHHhhcccchHHHHHHHHHHcCCCCchHHHHHHHHHhhhhhhhhHHhhhccCCCCC-----
Confidence 98876544 5455 8999999999999999999999999999999999999999999999999999999988753
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHccCCCCCCcc
Q 011501 318 EQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVL 397 (484)
Q Consensus 318 ~~~~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~Gcii~s~ll~~i~~~~~~~~~~~~ll 397 (484)
....+++||+|||||||||++|++|+|||+||++++++|+|++|+.+|+++||+||||||+||+.|.++|+++|+++|||
T Consensus 313 ~~~~~~~~~~~~v~~al~~~~~~~yaqGf~ll~~a~~~~~~~l~~~~ia~~wr~Gciirs~~l~~i~~a~~~~~~l~~l~ 392 (474)
T 2iz1_A 313 DFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPYGTIAQIWRAGCIIRAEFLQNITDAFDKDSELENLL 392 (474)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSSSCTTCBTTHHHHHHHHHHCTTCCCGG
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccchHHHHHHHHHHHHHhcCCChhhhh
Confidence 23458899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHhhcCCCcchhHHHHHhhccCCccceeccCCCcccccccc
Q 011501 398 VDPEFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERVDMSGSFHTEWFK 477 (484)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~~~~~~~~~~~~~~~i~a~rd~fG~h~~~r~d~~~~~h~~w~~ 477 (484)
+|+.|.+.+++..++|||||..|++.|+|+|++++||+||++||++++|+|||||||||||+|||+|+|++|.||++|++
T Consensus 393 ~~~~~~~~~~~~~~~~r~~v~~a~~~~~p~p~~s~al~~~~~~~~~~~~~~l~qa~rd~fg~h~~~r~~~~~~~h~~w~~ 472 (474)
T 2iz1_A 393 LDDYFVDITKRYQEAVRDVVSLAVQAGTPIPTFTSAISYYDSYRSENLPANLIQAQRDYFGAHTYERTDKAGIFHYDWYT 472 (474)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTCSSCTHHHHHHHHHHHHCCCBCBSSSSSCBCCCCC-
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccCCchhhHHHHHHHhcCCccceecCCCCeeeccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred C
Q 011501 478 I 478 (484)
Q Consensus 478 ~ 478 (484)
+
T Consensus 473 ~ 473 (474)
T 2iz1_A 473 E 473 (474)
T ss_dssp -
T ss_pred C
Confidence 4
No 5
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=100.00 E-value=9.8e-100 Score=802.94 Aligned_cols=471 Identities=49% Similarity=0.851 Sum_probs=434.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHH-HhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE-RAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~-~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
|+|||||+|.||.+||.+|+++|++|++|||++++++.+.+ ... +.++..+.+++++++.++.+|+||+|||++.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~---g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~ 79 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAK---GTKVLGAHSLEEMVSKLKKPRRIILLVKAGQA 79 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTT---TSSCEECSSHHHHHHHBCSSCEEEECSCTTHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcccc---CCCeEEeCCHHHHHhhccCCCEEEEeCCChHH
Confidence 58999999999999999999999999999999999988876 211 01367788999998755569999999999878
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCCccccCCCHHHHHHHHHHHHHH
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKV 162 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll~~i 162 (484)
++++++++.+.+.+|++|||++|+.+.++.++.+.+.+.|++|+++|++|++..+..|+++++||++++++.++++|+.+
T Consensus 80 v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g~~~~a~~g~~i~~gg~~e~~~~v~~ll~~~ 159 (482)
T 2pgd_A 80 VDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGPSLMPGGNKEAWPHIKAIFQGI 159 (482)
T ss_dssp HHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEEEEEECTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCCCChhhhccCCeEEeCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999988888888888899999999999999999999889999999999999999999
Q ss_pred hccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-CCCCHHHHHHHHHhhccCcchhhhhhhhccc
Q 011501 163 AAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSV-GKLSNEELQQVFSEWNKGELLSFLIEITADI 241 (484)
Q Consensus 163 ~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~-g~~~~~~i~~~~~~~~~g~~~s~l~~~~~~~ 241 (484)
+.++.+++||+.++|+.|.|+++||++|++.++.+++++|++.++++. | ++++++.+++..|+.+.+.|++.+++.++
T Consensus 160 g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G-~~~~~~~~~~~~w~~g~~~S~l~~~~~~~ 238 (482)
T 2pgd_A 160 AAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLG-LGHKEMAKAFEEWNKTELDSFLIEITASI 238 (482)
T ss_dssp SCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC-CCHHHHHHHHHHHTTTTTCBHHHHHHHHH
T ss_pred hhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-cCHHHHHHHHHHhcCCCcCchHHHHHhHH
Confidence 987545689999999999999999999999999999999999999999 8 99999999999999999999999999887
Q ss_pred cccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHhcCchHHHHHHHhccCCCCCCccccccc
Q 011501 242 FGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTV 321 (484)
Q Consensus 242 l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s~~~~~r~~~~~~~~~~~~~~~~~~~~~ 321 (484)
+..+ ++++++.++.+.+.++||+||+|+++.|+++|+|+|++.++|++|+.|.+|++|..+++.+++|... ....
T Consensus 239 l~~~-d~~~~~~ld~i~d~~~~k~t~~~~~~~A~~~Gv~~P~i~~av~~~~~s~~k~~r~~~~~~~~g~~~~----~~~~ 313 (482)
T 2pgd_A 239 LKFQ-DADGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSSLKDERIQASKKLKGPQNI----PFEG 313 (482)
T ss_dssp HHCB-CTTSSBSGGGSCCCCCCCSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCC----CCCS
T ss_pred hhcc-CCCCCeeecccccccccccHHHHHHHHHHHcCCCcchHHHHHHHHhhhhhhhHHHHHhhhcCCCCcc----ccCc
Confidence 7665 4667789999999999999999999999999999999988899999999999999999999887521 2335
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHccCCCCCCcccchh
Q 011501 322 DKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPE 401 (484)
Q Consensus 322 ~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~Gcii~s~ll~~i~~~~~~~~~~~~ll~~~~ 401 (484)
+.+||+|||||||||++|++|+|||+||++++++|+|++|+.+|+++||+||||||+||+.|.++|+++|+|+||++|+.
T Consensus 314 ~~~~~~~~v~~al~~~~~~syaqGf~ll~~as~~~~w~l~~~~ia~~wr~Gciirs~~l~~i~~a~~~~~~l~~l~~~~~ 393 (482)
T 2pgd_A 314 DKKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFDRNPGLQNLLLDDF 393 (482)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTTSSSTTCBTHHHHHHHHHHHCTTCSCGGGSHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCcchHHHHHHHHHHHHhcCCChhhhhcCHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHhhcCCCcchhHHHHHhhccCCccceeccCCC-ccccccccCCc
Q 011501 402 FAKEIIERQSAWRRVVCLAINSGISTPGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERVDMSG-SFHTEWFKIAK 480 (484)
Q Consensus 402 ~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~~~~~~~~~~~~~~~i~a~rd~fG~h~~~r~d~~~-~~h~~w~~~~~ 480 (484)
|.+.+++.+++|||||..|++.|+|+|++++||+||++|+++++|+|||||||||||+|||+|+|+|| .||++|++++.
T Consensus 394 ~~~~~~~~~~~~r~~v~~a~~~g~p~p~~s~al~~~~~~~~~~~~~~l~qa~rd~fG~h~~~r~~~~~~~~h~~w~~~~~ 473 (482)
T 2pgd_A 394 FKSAVENCQDSWRRAISTGVQAGIPMPCFTTALSFYDGYRHAMLPANLIQAQRDYFGAHTYELLAKPGQFIHTNWTGHGG 473 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHCSSCTHHHHHHHHHHHHCCCBCCSSSTTCCBCCCCSCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccCCcchhHHHHHHhhcCCceeeecCCCCCceecccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999987555
Q ss_pred cCC
Q 011501 481 QSK 483 (484)
Q Consensus 481 ~~~ 483 (484)
+++
T Consensus 474 ~~~ 476 (482)
T 2pgd_A 474 SVS 476 (482)
T ss_dssp ---
T ss_pred ccc
Confidence 543
No 6
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=100.00 E-value=4.7e-97 Score=780.80 Aligned_cols=463 Identities=37% Similarity=0.646 Sum_probs=429.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhh----hcCCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK----QEGNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~----~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
|+|||||+|.||.+||.+|+++|++|++|||++++++.+.+... .. ++..+.+++++++.++++|+||+|||+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~---~i~~~~~~~e~v~~l~~aDvVilaVp~ 78 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAG---NLKAFETMEAFAASLKKPRKALILVQA 78 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGG---GEEECSCHHHHHHHBCSSCEEEECCCC
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCC---CeEEECCHHHHHhcccCCCEEEEecCC
Confidence 58999999999999999999999999999999999998876521 01 256788999999876679999999999
Q ss_pred CchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCCccccCCCHHHHHHHHHHH
Q 011501 80 GSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDIL 159 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll 159 (484)
+.+++++++++.+.+.+|++|||++|+.+.++.++.+.+.+.|++|+++|++|++..++.|+++++||++++++.++++|
T Consensus 79 ~~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll 158 (478)
T 1pgj_A 79 GAATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGEEGARKGPAFFPGGTLSVWEEIRPIV 158 (478)
T ss_dssp SHHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESHHHHHHHCCEEEEEECHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccCCHHHHhcCCeEeccCCHHHHHHHHHHH
Confidence 87899999999999999999999999999888888888888899999999999999999999888999999999999999
Q ss_pred HHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhc-cCcchhhhhhhh
Q 011501 160 LKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWN-KGELLSFLIEIT 238 (484)
Q Consensus 160 ~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~-~g~~~s~l~~~~ 238 (484)
+.++.+..+++||+.++|+.|+|+++|+++|++.++.+++++|++.++++.| ++++++.+++..|+ .|.+.|++.+++
T Consensus 159 ~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G-~~~~~~~~l~~~w~~~g~~~s~l~~~~ 237 (478)
T 1pgj_A 159 EAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMG-LNNDEVAAVLEDWKSKNFLKSYMLDIS 237 (478)
T ss_dssp HHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHTSTTCBHHHHHH
T ss_pred HHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHhccCCCcCchHHHhh
Confidence 9999864467899999999999999999999999999999999999999988 99999999999999 889999999999
Q ss_pred ccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHhcCchHHHHHHHhccCCCC-CCccc
Q 011501 239 ADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSGLKEERVEAAKVFRSSGI-GDVLA 317 (484)
Q Consensus 239 ~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s~~~~~r~~~~~~~~~~~~-~~~~~ 317 (484)
.+++..+| +.+.+.++.+.|.++|||||+|+++.|+++|+|+|++.++|++|++|..+++|..+++++++|.. .
T Consensus 238 ~~~l~~~d-~~G~~~ld~i~D~~~~kgtg~~~~~~A~~~Gv~~Pi~~~av~~r~ls~~~~~r~~~~~~l~~~~~~~---- 312 (478)
T 1pgj_A 238 IAAARAKD-KDGSYLTEHVMDRIGSKGTGLWSAQEALEIGVPAPSLNMAVVSRQFTMYKTERQANASNAPGITQSP---- 312 (478)
T ss_dssp HHHHHCBC-TTSSBGGGGBCCCCCCCSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHTHHHHHHHHHHSTTTTCCC----
T ss_pred chhhhcCC-CCChhHHHHHHHHhcCccHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCCHHHHHHHhcCCCCccc----
Confidence 88876554 43348999999999999999999999999999999999999999999999999999999987752 1
Q ss_pred ccc-cch---hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHccCCCC
Q 011501 318 EQT-VDK---KKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDL 393 (484)
Q Consensus 318 ~~~-~~~---~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~Gcii~s~ll~~i~~~~~~~~~~ 393 (484)
... .++ ..|+++|++|+|++++++|+|||++|++++++|+|+||+.+|+++||+||||||.||+.|.++|+++|++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~al~~~~~~~yaqg~~~~~~a~~~~~w~l~~~~~a~~wr~gciir~~~l~~i~~a~~~~~~~ 392 (478)
T 1pgj_A 313 GYTLKNKSPSGPEIKQLYDSVCIAIISCYAQMFQCLREMDKVHNFGLNLPATIATFRAGCILQGYLLKPMTEAFEKNPNI 392 (478)
T ss_dssp CCCCSCCSTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHTTSSSSTTCBTTHHHHHHHHHHCTTC
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHcCCceeeHHHHHHHHHHHhcCCCh
Confidence 122 355 7899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccchhHHHHHHhhhhhHHHHHHH-HHHcCCChHHHHHHHHHHHhhcCCCcc-hhHHHHHhhccCCccceeccCCCcc
Q 011501 394 ANVLVDPEFAKEIIERQSAWRRVVCL-AINSGISTPGMSSSLAYFDTYRRERLP-ANLVQAQRDYFGAHTYERVDMSGSF 471 (484)
Q Consensus 394 ~~ll~~~~~~~~~~~~~~~~~~~v~~-a~~~g~p~p~~~~al~~~~~~~~~~~~-~~~i~a~rd~fG~h~~~r~d~~~~~ 471 (484)
.||| +.|.+.+++.+++||++|.. |++.|+|+|++|+||+|||+||+++|| +|||||||||||+|||+|+|++|.|
T Consensus 393 ~~l~--~~~~~~~~~~~~~~r~~v~~~~~~~g~~~p~~~~~l~y~d~~~~~~l~~~~l~qaqrd~fg~h~~~~~~~~~~~ 470 (478)
T 1pgj_A 393 SNLM--CAFQTEIRAGLQNYRDMVALITSKLEVSIPVLSASLNYVTAMFTPTLKYGQLVSLQRDVFGRHGYERVDKDGRE 470 (478)
T ss_dssp SCTT--GGGHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTCSCCTHHHHHHHHHHHHHCCCEEBSSSSSEE
T ss_pred hhHH--HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhccccCCcchhHHHHHHhccCceeeecCCCCce
Confidence 9999 99999999999999999999 999999999999999999999999999 9999999999999999999999999
Q ss_pred cccccc
Q 011501 472 HTEWFK 477 (484)
Q Consensus 472 h~~w~~ 477 (484)
|++|++
T Consensus 471 h~~w~~ 476 (478)
T 1pgj_A 471 SFQWPE 476 (478)
T ss_dssp CCCCCC
T ss_pred ecCCCC
Confidence 999986
No 7
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=100.00 E-value=2e-52 Score=424.47 Aligned_cols=321 Identities=30% Similarity=0.481 Sum_probs=262.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+|+|||||+|.||.+||.+|+++|++|++|||++++++.+.+.+ +..+.+++++++..+.+|+||+|||++ +
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g-------~~~~~s~~e~~~~a~~~DvVi~~vp~~-~ 93 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREG-------IAGARSIEEFCAKLVKPRVVWLMVPAA-V 93 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTT-------CBCCSSHHHHHHHSCSSCEEEECSCGG-G
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCC-------CEEeCCHHHHHhcCCCCCEEEEeCCHH-H
Confidence 57999999999999999999999999999999999998887543 567889999999844449999999998 9
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCCccccCCCHHHHHHHHHHHHHH
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKV 162 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll~~i 162 (484)
++++++++.+.+++|++|||+||+.|.++.++.+.+.++|++|+++||+||+.+++.|+++|+||+++++++++++|+.+
T Consensus 94 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~~~a~~G~~im~GG~~~a~~~~~~ll~~l 173 (358)
T 4e21_A 94 VDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGIFGLERGYCLMIGGEKQAVERLDPVFRTL 173 (358)
T ss_dssp HHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGGGHHHHCCEEEEESCHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCHHHHhcCCeeeecCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCC-------------CCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCc
Q 011501 163 AAQVPDS-------------GPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGE 229 (484)
Q Consensus 163 ~~~~~~~-------------~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~ 229 (484)
+.+..++ +++++|+|+.|+|+++|+++|.+.++.+++++|++.++++.| +...
T Consensus 174 g~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~l~~~~i~~~aE~~~la~~a~-~~~~------------- 239 (358)
T 4e21_A 174 APGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVHNGIEYGLMAAYAEGLNILHHAN-AGKE------------- 239 (358)
T ss_dssp SCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CC---------------
T ss_pred ccccccCcccccccccccccccceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cccc-------------
Confidence 9532000 136899999999999999999999999999999999999876 2211
Q ss_pred chhhhhhhhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHhcCchHHHHHHHhccC
Q 011501 230 LLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSGLKEERVEAAKVFRS 309 (484)
Q Consensus 230 ~~s~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s~~~~~r~~~~~~~~~ 309 (484)
.. . -+ |. .. |+
T Consensus 240 ------------~~--~------------~~-------------~~-~~---~~-------------------------- 250 (358)
T 4e21_A 240 ------------GQ--G------------AD-------------AE-TA---PL-------------------------- 250 (358)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------cc--c------------cc-------------cc-cc---cc--------------------------
Confidence 00 0 00 00 00 10
Q ss_pred CCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHcc
Q 011501 310 SGIGDVLAEQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDR 389 (484)
Q Consensus 310 ~~~~~~~~~~~~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~Gcii~s~ll~~i~~~~~~ 389 (484)
+.+++|+|++|+.+|+++||+||+|+|+||+.+.++|.+
T Consensus 251 -----------------------------------------~~~~~~~~~~d~~~i~~~~~~g~~~~s~~l~~~~~~~~~ 289 (358)
T 4e21_A 251 -----------------------------------------RNPDFYRYDLDLADITEVWRRGSVISSWLLDLSATALLD 289 (358)
T ss_dssp ------------------------------------------CGGGCCCCCCHHHHHHHHTTTSTTCBHHHHHHHHHHHH
T ss_pred -----------------------------------------ccchhcccCCCHHHHHHHHhCccHHHHHHHHHHHHHHhh
Confidence 015779999999999999999999999999999999998
Q ss_pred CCCCCCcccchhHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHH-HHHhhcCCCcc-hhHHHHHhhccCCccce
Q 011501 390 NPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLA-YFDTYRRERLP-ANLVQAQRDYFGAHTYE 463 (484)
Q Consensus 390 ~~~~~~ll~~~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~-~~~~~~~~~~~-~~~i~a~rd~fG~h~~~ 463 (484)
+|.++++. ..+. ++++ +||++..|.+.|+|+|++++||+ ||.+ +.++++ .|++||||||||+|+++
T Consensus 290 ~p~~~~~~--~~~~---d~g~--~r~~~~~A~~~gvp~p~~~~al~~~~~s-~~~~~~~~~l~~a~r~~fG~h~~~ 357 (358)
T 4e21_A 290 SPDLQEFQ--GRVS---DSGE--GRWTVAAAIDEGVPAHVLSSALYERFSS-RGEDDFANRLLSAMRYEFGGHREK 357 (358)
T ss_dssp CTTCTTC----CCC---CCSH--HHHHHHHHHHHTCCCHHHHHHHHHHHHH-TTTTHHHHHHHHHHC---------
T ss_pred CCChHHHH--HHHH---hcCc--HHHHHHHHHHcCCChHHHHHHHHHHHHH-CCCcccHHHHHHHHHHhcCCCCCC
Confidence 87665422 2222 1334 49999999999999999999997 5666 778888 57999999999999975
No 8
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=100.00 E-value=2.4e-47 Score=378.54 Aligned_cols=265 Identities=21% Similarity=0.285 Sum_probs=240.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
|+||||||+|.||.+||+||+++||+|++|||++++++.+.+.+ .+.+.|+.|+++. +|+||+|||++.+
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~G-------a~~a~s~~e~~~~---~dvv~~~l~~~~~ 72 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAG-------ASAARSARDAVQG---ADVVISMLPASQH 72 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT-------CEECSSHHHHHTT---CSEEEECCSCHHH
T ss_pred cCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcC-------CEEcCCHHHHHhc---CCceeecCCchHH
Confidence 56899999999999999999999999999999999999998764 5789999999998 9999999999999
Q ss_pred HHHHHH---HHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCC-ccccCCCHHHHHHHHHH
Q 011501 83 VDQTIK---TLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGP-SLMPGGSFEAYKHIEDI 158 (484)
Q Consensus 83 v~~vl~---~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~l 158 (484)
+++|+. ++.+.+.+|++|||+||+.|.+++++.+.+.++|++|+|+||+||+.+|+.|+ ++|+||+++++++++|+
T Consensus 73 v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVsGg~~~A~~G~L~imvGG~~~~~~~~~p~ 152 (300)
T 3obb_A 73 VEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARPL 152 (300)
T ss_dssp HHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCCCCHHHHHhCCEEEEEeCCHHHHHHHHHH
Confidence 999985 47788999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhhhhh
Q 011501 159 LLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEIT 238 (484)
Q Consensus 159 l~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~ 238 (484)
|+.++.+ ++|+|+.|+|+.+|+++|.+.++++++++|++.++++.| +|++.+.+++ +.+...||.++..
T Consensus 153 l~~~g~~-------i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~G-ld~~~~~~vl---~~~~~~s~~~~~~ 221 (300)
T 3obb_A 153 FEAMGRN-------IFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANG-LEAKVLAEIM---RRSSGGNWALEVY 221 (300)
T ss_dssp HHHHEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---HTSTTCCHHHHHC
T ss_pred HHHhCCC-------EEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHH---HhCcccchHHHhh
Confidence 9999976 599999999999999999999999999999999999999 9999999987 5677788998877
Q ss_pred ccccc------cccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHhc
Q 011501 239 ADIFG------IKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSG 295 (484)
Q Consensus 239 ~~~l~------~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s~ 295 (484)
.+... ..++|.++|.++.+.||++ ++.+.|++.|+|+|+...+ .++|.++
T Consensus 222 ~p~~~~~~~~~~~~~~~~~f~~~l~~KDl~------l~~~~A~~~g~~~p~~~~a-~~~~~~a 277 (300)
T 3obb_A 222 NPWPGVMENAPASRDYSGGFMAQLMAKDLG------LAQEAAQASASSTPMGSLA-LSLYRLL 277 (300)
T ss_dssp CCSTTTSTTSGGGGTTCSSSBHHHHHHHHH------HHHHHHHHHTCCCHHHHHH-HHHHHHH
T ss_pred ccccchhhhccccccCCccchHHHHHHHHH------HHHHHHHHcCCCChHHHHH-HHHHHHH
Confidence 65321 1246889999999999986 8999999999999987754 5655544
No 9
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=100.00 E-value=1.8e-45 Score=365.02 Aligned_cols=263 Identities=17% Similarity=0.268 Sum_probs=232.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
.||||||+|.||.+||++|+++||+|++|||++++++++.+.+ .+.+.++.|+++. +|+||+|+|++.++
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G-------~~~~~s~~e~~~~---~dvvi~~l~~~~~~ 75 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLG-------ATVVENAIDAITP---GGIVFSVLADDAAV 75 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTT-------CEECSSGGGGCCT---TCEEEECCSSHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcC-------CeEeCCHHHHHhc---CCceeeeccchhhH
Confidence 4899999999999999999999999999999999988876543 5788999999987 99999999999888
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCC-ccccCCCHHHHHHHHHHHHH
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGP-SLMPGGSFEAYKHIEDILLK 161 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll~~ 161 (484)
++++ ..+.+.+.++++|||+||+.|.+++++.+.+.++|++|+|+||+|++.+++.|+ ++|+||+++++++++|+|+.
T Consensus 76 ~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg~~~a~~g~l~im~gG~~~~~~~~~~~l~~ 155 (297)
T 4gbj_A 76 EELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFARPEAVRAKVGNICLSGNAGAKERIKPIVEN 155 (297)
T ss_dssp HHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCCEEEEEECHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCCccccccccceeecccchhHHHHHHHHHHH
Confidence 8776 568888999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred HhccCCCCCCceEEeCC-chhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhhhhhcc
Q 011501 162 VAAQVPDSGPCVTYVGK-GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITAD 240 (484)
Q Consensus 162 i~~~~~~~~~~~~~~G~-~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~~~ 240 (484)
++.+ ++|+|+ +|+|+.+|+++|.+.++.+++++|++.++++.| +|++++.+++ +.+.+.||.++.+.+
T Consensus 156 ~g~~-------i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~G-ld~~~~~~~l---~~~~~~s~~~~~~~~ 224 (297)
T 4gbj_A 156 FVKG-------VFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNG-ISRQSIYEML---TSTLFAAPIFQNYGK 224 (297)
T ss_dssp TCSE-------EEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---HTTTTCSHHHHHHHH
T ss_pred hhCC-------eEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHH---HhhcccCchhhccCc
Confidence 9976 589984 799999999999999999999999999999999 9999998887 578888999999888
Q ss_pred ccccccCCCC-chhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHhc
Q 011501 241 IFGIKDDKGD-GYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSG 295 (484)
Q Consensus 241 ~l~~~~~~~~-~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s~ 295 (484)
.+..+ +|.| +|.++.+.||++ ++.+.|++.|+|+|+... +.++|..+
T Consensus 225 ~~~~~-~~~p~~f~~~l~~KDl~------l~~~~A~~~g~~~p~~~~-~~~~~~~a 272 (297)
T 4gbj_A 225 LVASN-TYEPVAFRFPLGLKDIN------LTLQTASDVNAPMPFADI-IRNRFISG 272 (297)
T ss_dssp HHHHT-CCCSCSSBHHHHHHHHH------HHHHHHHHTTCCCHHHHH-HHHHHHHH
T ss_pred cccCC-CCCCccchhHHHHHHHH------HHHHHHHHhCCCChHHHH-HHHHHHHH
Confidence 77654 4665 799999999986 899999999999998765 46666554
No 10
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=100.00 E-value=4.6e-38 Score=314.11 Aligned_cols=264 Identities=19% Similarity=0.289 Sum_probs=238.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
||+|||||+|.||.+||.+|+++||+|++|||++++++.+.+.+ +..+.+++++++. +|+||+|||++.+
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g-------~~~~~~~~~~~~~---aDvvi~~vp~~~~ 90 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHG-------ASVCESPAEVIKK---CKYTIAMLSDPCA 90 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTT-------CEECSSHHHHHHH---CSEEEECCSSHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC-------CeEcCCHHHHHHh---CCEEEEEcCCHHH
Confidence 57999999999999999999999999999999999998887543 5678899999988 9999999999888
Q ss_pred HHHHH---HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCC-ccccCCCHHHHHHHHHH
Q 011501 83 VDQTI---KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGP-SLMPGGSFEAYKHIEDI 158 (484)
Q Consensus 83 v~~vl---~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~l 158 (484)
+++++ +++.+.+.+|++|||+||+.|.+++++.+.+.++|++|+++|++|++..+..|+ .+++||+++++++++++
T Consensus 91 ~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~l 170 (310)
T 3doj_A 91 ALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVSGSKKPAEDGQLIILAAGDKALFEESIPA 170 (310)
T ss_dssp HHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHHHHH
T ss_pred HHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEeCCCCCChhHHhcCCeEEEEcCCHHHHHHHHHH
Confidence 99998 788899999999999999999999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhhhhh
Q 011501 159 LLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEIT 238 (484)
Q Consensus 159 l~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~ 238 (484)
|+.++.+ ++++|+.|.|+.+|+++|.+.+..+++++|++.++++.| ++++++.+++. .+...|++++..
T Consensus 171 l~~~g~~-------~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G-~d~~~~~~~~~---~~~~~s~~~~~~ 239 (310)
T 3doj_A 171 FDVLGKR-------SFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSG-LSSDTLLDILD---LGAMTNPMFKGK 239 (310)
T ss_dssp HHHHEEE-------EEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SCHHHHHHHHH---HSTTCCHHHHHH
T ss_pred HHHhCCC-------EEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH---hcccccHHHHHH
Confidence 9999976 589999999999999999999999999999999999999 99999999984 567788888877
Q ss_pred ccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHhc
Q 011501 239 ADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSG 295 (484)
Q Consensus 239 ~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s~ 295 (484)
.+.+.. ++|.++|.++...||++ .+++.|+++|+|+|++..+ .+.+..+
T Consensus 240 ~~~~~~-~~~~~~f~~~~~~KDl~------~~~~~a~~~g~~~p~~~~~-~~~~~~a 288 (310)
T 3doj_A 240 GPSMNK-SSYPPAFPLKHQQKDMR------LALALGDENAVSMPVAAAA-NEAFKKA 288 (310)
T ss_dssp HHHHHT-TCCCCSSBHHHHHHHHH------HHHHHHHHTTCCCHHHHHH-HHHHHHH
T ss_pred hhhhhc-CCCCCCccHHHHHHHHH------HHHHHHHHcCCCChHHHHH-HHHHHHH
Confidence 666554 35788999999999985 8999999999999987754 5555443
No 11
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=100.00 E-value=3.7e-38 Score=316.20 Aligned_cols=263 Identities=19% Similarity=0.277 Sum_probs=237.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+|+|||||+|.||.+||.+|+++|++|++|||++++.+.+.+.+ +..+.+++++++. +|+||+|||++.+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g-------~~~~~~~~e~~~~---aDvVi~~vp~~~~ 100 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALG-------ATIHEQARAAARD---ADIVVSMLENGAV 100 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTT-------CEEESSHHHHHTT---CSEEEECCSSHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCC-------CEeeCCHHHHHhc---CCEEEEECCCHHH
Confidence 46999999999999999999999999999999999988887543 5778899999887 9999999999888
Q ss_pred HHHHHH--HHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCC-ccccCCCHHHHHHHHHHH
Q 011501 83 VDQTIK--TLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGP-SLMPGGSFEAYKHIEDIL 159 (484)
Q Consensus 83 v~~vl~--~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll 159 (484)
++.++. ++.+.+.++++|||+||+.|.+++++.+.+.++|++|+++|++|++..+..|+ .+++||+++++++++++|
T Consensus 101 ~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll 180 (320)
T 4dll_A 101 VQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTPVSGGTVGAEQGTLVIMAGGKPADFERSLPLL 180 (320)
T ss_dssp HHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECHHHHHHHTCEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHhHHhcCCeeEEeCCCHHHHHHHHHHH
Confidence 999887 88888999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred HHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhhhhhc
Q 011501 160 LKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITA 239 (484)
Q Consensus 160 ~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~~ 239 (484)
+.+ .+ ++++|+.|+|+.+|+++|.+.+..+++++|++.++++.| +|++++.+++ +.+.+.||+++...
T Consensus 181 ~~~-~~-------~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G-~d~~~~~~~~---~~~~~~s~~~~~~~ 248 (320)
T 4dll_A 181 KVF-GR-------ATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFATKGG-ADMAKVKEAI---TGGFADSRVLQLHG 248 (320)
T ss_dssp HHH-EE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-CCHHHHHHHH---TTSTTCBHHHHTHH
T ss_pred Hhc-CC-------EEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHH---HcccccCHHHHHhh
Confidence 999 76 489999999999999999999999999999999999998 9999999987 56677899998877
Q ss_pred cccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHhc
Q 011501 240 DIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSG 295 (484)
Q Consensus 240 ~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s~ 295 (484)
+.+..+ +|.++|.++.+.||+. ++++.|+++|+|+|++..+ .+.+..+
T Consensus 249 ~~~l~~-~~~~gf~~~~~~KDl~------~~~~~a~~~g~~~p~~~~~-~~~~~~a 296 (320)
T 4dll_A 249 QRMVER-DFAPRARLSIQLKDMR------NALATAQEIGFDAPITGLF-EQLYAEG 296 (320)
T ss_dssp HHHHTT-CCCCSSBHHHHHHHHH------HHHHHHHHTTCCCHHHHHH-HHHHHHH
T ss_pred hhhccC-CCCCcccHHHHHHHHH------HHHHHHHHcCCCChHHHHH-HHHHHHH
Confidence 666543 5788999999999986 8999999999999987754 5555443
No 12
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=100.00 E-value=5.8e-38 Score=311.40 Aligned_cols=260 Identities=18% Similarity=0.203 Sum_probs=231.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++|||||+|.||.+||.+|+++||+|++|||++++++.+.+.+ ++.+++++++++ +|+||+|||++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~~~~~~~~~~----aDvvi~~vp~~~~ 83 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAG-------ATLADSVADVAA----ADLIHITVLDDAQ 83 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTT-------CEECSSHHHHTT----SSEEEECCSSHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC-------CEEcCCHHHHHh----CCEEEEECCChHH
Confidence 46899999999999999999999999999999999988887643 577889998875 8999999999888
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCC-ccccCCCHHHHHHHHHHHHH
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGP-SLMPGGSFEAYKHIEDILLK 161 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll~~ 161 (484)
++++++++.+.++++++|||+||+.|.+++++.+.+.++|++|+++|++|++..+..|+ .+++||+++++++++++|+.
T Consensus 84 ~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~ 163 (296)
T 3qha_A 84 VREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAAAARGELATMVGADREVYERIKPAFKH 163 (296)
T ss_dssp HHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEESCHHHHHHTCEEEEEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHHHHhcCCccEEecCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988999999999999999999999 99999999999999999999
Q ss_pred HhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHH------HHHHHhhccCcchhhhh
Q 011501 162 VAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEEL------QQVFSEWNKGELLSFLI 235 (484)
Q Consensus 162 i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i------~~~~~~~~~g~~~s~l~ 235 (484)
++.+ ++++|+.|+|+.+|+++|.+.+..+++++|++.++++.| +|++++ .+++ +.+.+.||+.
T Consensus 164 ~g~~-------~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G-~d~~~~~~~~~~~~~i---~~~~~~s~~~ 232 (296)
T 3qha_A 164 WAAV-------VIHAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAG-LDLQALGRVVRHTDAL---TGGPGAIMVR 232 (296)
T ss_dssp HEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHH---HCCGGGGCCC
T ss_pred HcCC-------eEEcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHhhhcchHHHH---hcCcccCHHh
Confidence 9976 489999999999999999999999999999999999999 999999 5555 4577778776
Q ss_pred hhhccccccccCCCCchhH-----HHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHhc
Q 011501 236 EITADIFGIKDDKGDGYLV-----DKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSG 295 (484)
Q Consensus 236 ~~~~~~l~~~~~~~~~~~l-----~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s~ 295 (484)
+ ...++. + |.++|.+ +.+.||+. ++.+.|+++|+|+|++..+ .+.|..+
T Consensus 233 ~-~~~~~~--~-~~~~f~~~~~~~~~~~KD~~------~~~~~a~~~g~~~p~~~~~-~~~~~~~ 286 (296)
T 3qha_A 233 D-NMKDLE--P-DNFLYQPFLHTRGLGEKDLS------LALALGEAVSVDLPLARLA-YEGLAAG 286 (296)
T ss_dssp S-SCSCCC--T-TSTTHHHHHHHHHHHHHHHH------HHHHHHHHTTCCCHHHHHH-HHHHHHH
T ss_pred h-chhhhh--c-CCCCCchhhhhhHHHHHHHH------HHHHHHHHcCCCChHHHHH-HHHHHHH
Confidence 6 333443 2 6788988 99999985 8889999999999988754 5666544
No 13
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=100.00 E-value=1.3e-37 Score=307.43 Aligned_cols=262 Identities=17% Similarity=0.269 Sum_probs=237.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
|||||||+|.||.++|.+|+++|++|++|||++++.+.+.+.+ +..+.+++++++. +|+||+|||++.++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~~~~~~~~~~~---aDvvi~~vp~~~~~ 71 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALG-------AERAATPCEVVES---CPVTFAMLADPAAA 71 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTT-------CEECSSHHHHHHH---CSEEEECCSSHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCC-------CeecCCHHHHHhc---CCEEEEEcCCHHHH
Confidence 6899999999999999999999999999999999998887643 5778899999988 99999999988789
Q ss_pred HHHH---HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCC-ccccCCCHHHHHHHHHHH
Q 011501 84 DQTI---KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGP-SLMPGGSFEAYKHIEDIL 159 (484)
Q Consensus 84 ~~vl---~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll 159 (484)
++++ +++.+.+++|++|||+||..|.+++++.+.+.++|++|+++|++|++..+..|+ .+++||+++++++++++|
T Consensus 72 ~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll 151 (287)
T 3pef_A 72 EEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVSGSKKPAEDGTLIILAAGDRNLYDEAMPGF 151 (287)
T ss_dssp HHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHHHHHH
T ss_pred HHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEECCCcCCHHHHhcCCEEEEEeCCHHHHHHHHHHH
Confidence 9999 888899999999999999999999999999999999999999999999999999 899999999999999999
Q ss_pred HHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhhhhhc
Q 011501 160 LKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITA 239 (484)
Q Consensus 160 ~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~~ 239 (484)
+.++.+ ++++|+.|.|+.+|+++|.+.+..+++++|++.++++.| ++++++.+++. .+.+.|++++...
T Consensus 152 ~~~g~~-------~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G-~d~~~~~~~~~---~~~~~s~~~~~~~ 220 (287)
T 3pef_A 152 EKMGKK-------IIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAG-LATDAILDVIG---AGAMANPMFALKG 220 (287)
T ss_dssp HHHEEE-------EEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH---HSTTCCHHHHHHH
T ss_pred HHhCCC-------eEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH---hcccccHHHHHHh
Confidence 999976 489999999999999999999999999999999999999 99999999984 5667889888877
Q ss_pred cccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHh
Q 011501 240 DIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLS 294 (484)
Q Consensus 240 ~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s 294 (484)
+.+..+ +|.++|.++...||+. ++++.|+++|+|+|++..+ .+.+..
T Consensus 221 ~~~~~~-~~~~~~~~~~~~kd~~------~~~~~a~~~g~~~p~~~~~-~~~~~~ 267 (287)
T 3pef_A 221 GLIRDR-NFAPAFPLKHMQKDLR------LAVALGDRVGQPLVASAAA-NELFKG 267 (287)
T ss_dssp HHHHTT-CCCCSSBHHHHHHHHH------HHHHHHHHHTCCCHHHHHH-HHHHHH
T ss_pred hhhhcC-CCCCCCchHHHHHHHH------HHHHHHHHcCCCChHHHHH-HHHHHH
Confidence 666543 5788999999999985 8999999999999987754 555443
No 14
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=100.00 E-value=9.6e-38 Score=308.41 Aligned_cols=262 Identities=18% Similarity=0.250 Sum_probs=236.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||.+||.+|+++||+|++|||++++.+.+.+.+ +..+.+++++++. +|+||+|||++.++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~~~~~~~~~~~---advvi~~v~~~~~~ 71 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALG-------ARQASSPAEVCAA---CDITIAMLADPAAA 71 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHT-------CEECSCHHHHHHH---CSEEEECCSSHHHH
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCC-------CeecCCHHHHHHc---CCEEEEEcCCHHHH
Confidence 5899999999999999999999999999999999998887653 5678899999988 99999999998789
Q ss_pred HHHH---HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCC-ccccCCCHHHHHHHHHHH
Q 011501 84 DQTI---KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGP-SLMPGGSFEAYKHIEDIL 159 (484)
Q Consensus 84 ~~vl---~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll 159 (484)
++++ +++.+.+.+|++|||+||+.|.+++++.+.+.++|++|+++|++|++..+..|+ .+++||+++++++++++|
T Consensus 72 ~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll 151 (287)
T 3pdu_A 72 REVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSGTKKPAEDGTLIILAAGDQSLFTDAGPAF 151 (287)
T ss_dssp HHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHTHHHH
T ss_pred HHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEECCccCCHHHHhcCCEEEEEeCCHHHHHHHHHHH
Confidence 9998 888899999999999999999999999999989999999999999999999999 899999999999999999
Q ss_pred HHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhhhhhc
Q 011501 160 LKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITA 239 (484)
Q Consensus 160 ~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~~ 239 (484)
+.++.+ ++++|+.|+|+.+|+++|.+.+..+++++|++.++++.| ++++++.+++. .+...|++++...
T Consensus 152 ~~~g~~-------~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G-~~~~~~~~~~~---~~~~~s~~~~~~~ 220 (287)
T 3pdu_A 152 AALGKK-------CLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCG-LDGGQLLEVLD---AGAMANPMFKGKG 220 (287)
T ss_dssp HHHEEE-------EEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH---HSTTCCHHHHHHH
T ss_pred HHhCCC-------EEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH---hccccChHHHhhc
Confidence 999976 589999999999999999999999999999999999999 99999999984 5667888888877
Q ss_pred cccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHh
Q 011501 240 DIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLS 294 (484)
Q Consensus 240 ~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s 294 (484)
+.+..+ +|.++|.++...||++ ++++.|+++|+|+|++..+ .+.+..
T Consensus 221 ~~~~~~-~~~~~~~~~~~~kd~~------~~~~~a~~~g~~~p~~~~~-~~~~~~ 267 (287)
T 3pdu_A 221 QMLLSG-EFPTSFPLKHMQKDLR------LAVELGDRLGQPLHGAATA-NESFKR 267 (287)
T ss_dssp HHHHHT-CCCCSSBHHHHHHHHH------HHHHHHHHHTCCCHHHHHH-HHHHHH
T ss_pred cccccC-CCCCCCcHHHHHHHHH------HHHHHHHHcCCCChHHHHH-HHHHHH
Confidence 666543 5788899999999975 8999999999999987754 454443
No 15
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=3.7e-37 Score=306.64 Aligned_cols=264 Identities=21% Similarity=0.268 Sum_probs=235.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeee-cCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYG-FHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~-~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
+|+|||||+|.||.+||.+|+++|++|++|||++++++.+.+.+ ... +.+++++++. +|+||+|||++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~~~~~~~e~~~~---aDvvi~~vp~~~ 76 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEG-------ACGAAASAREFAGV---VDALVILVVNAA 76 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CSEEESSSTTTTTT---CSEEEECCSSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC-------CccccCCHHHHHhc---CCEEEEECCCHH
Confidence 46899999999999999999999999999999999998887654 334 7788888877 999999999987
Q ss_pred hHHHHH---HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCC-ccccCCCHHHHHHHHH
Q 011501 82 PVDQTI---KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGP-SLMPGGSFEAYKHIED 157 (484)
Q Consensus 82 ~v~~vl---~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ 157 (484)
.++.++ +++.+.++++++|||+||+.|.+++++.+.+.++|++|+++|++|++..+..|+ .+++||++++++++++
T Consensus 77 ~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ 156 (303)
T 3g0o_A 77 QVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLDAPVSGGAVKAAQGEMTVMASGSEAAFTRLKP 156 (303)
T ss_dssp HHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESCHHHHHTTCEEEEEECCHHHHHHHHH
T ss_pred HHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEeCCCCCChhhhhcCCeEEEeCCCHHHHHHHHH
Confidence 888888 788899999999999999999999999998988999999999999999999999 8999999999999999
Q ss_pred HHHHHhccCCCCCCceEEeCC-chhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhhh
Q 011501 158 ILLKVAAQVPDSGPCVTYVGK-GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIE 236 (484)
Q Consensus 158 ll~~i~~~~~~~~~~~~~~G~-~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~ 236 (484)
+|+.++.+ ++++|+ .|+|+.+|+++|.+.+..+++++|++.++++.| ++++++.+++ +.+...|++++
T Consensus 157 ll~~~g~~-------~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G-~d~~~~~~~~---~~~~~~s~~~~ 225 (303)
T 3g0o_A 157 VLDAVASN-------VYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAG-IPLDVMYDVV---THAAGNSWMFE 225 (303)
T ss_dssp HHHHHEEE-------EEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---TTSTTCCHHHH
T ss_pred HHHHHCCC-------EEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHH---HhcccCCHHHH
Confidence 99999976 489998 899999999999999999999999999999999 9999999987 45677888888
Q ss_pred hhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHhc
Q 011501 237 ITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSG 295 (484)
Q Consensus 237 ~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s~ 295 (484)
...+.+.. ++|.++|.++...||+. ++++.|+++|+|+|++..+ .+.+..+
T Consensus 226 ~~~~~~~~-~~~~~~~~~~~~~kD~~------~~~~~a~~~g~~~p~~~~~-~~~~~~a 276 (303)
T 3g0o_A 226 NRMQHVVD-GDYTPRSAVDIFVKDLG------LVADTAKALRFPLPLASTA-LNMFTSA 276 (303)
T ss_dssp HHHHHHHT-TCCCCSSBHHHHHHHHH------HHHHHHHHTTCCCHHHHHH-HHHHHHH
T ss_pred hhhHHHhc-CCCCCCCchHHHHHHHH------HHHHHHHHcCCCChHHHHH-HHHHHHH
Confidence 77665544 35788899999999985 8999999999999987754 5555443
No 16
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=100.00 E-value=1.5e-35 Score=294.78 Aligned_cols=263 Identities=21% Similarity=0.285 Sum_probs=235.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
||||+|||+|.||..||.+|+++|++|++|||++++.+.+.+.+ +..+.+++++++. +|+||+|||++.+
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g-------~~~~~~~~~~~~~---aDvvi~~vp~~~~ 72 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAG-------ASAARSARDAVQG---ADVVISMLPASQH 72 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT-------CEECSSHHHHHTT---CSEEEECCSCHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCC-------CeEcCCHHHHHhC---CCeEEEECCCHHH
Confidence 57999999999999999999999999999999999998887653 5678899999887 9999999998888
Q ss_pred HHHHHH---HHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCC-ccccCCCHHHHHHHHHH
Q 011501 83 VDQTIK---TLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGP-SLMPGGSFEAYKHIEDI 158 (484)
Q Consensus 83 v~~vl~---~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~l 158 (484)
++.++. ++.+.+.++++||++||..+..++++.+.+.++|++|+++|+++++..+..|+ .+++||+++.++.++++
T Consensus 73 ~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~g~l~~~~~g~~~~~~~~~~l 152 (302)
T 2h78_A 73 VEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARPL 152 (302)
T ss_dssp HHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEEEEccCChhhHhcCCceEEeCCCHHHHHHHHHH
Confidence 999998 89999999999999999999999999998988999999999999999999999 88999999999999999
Q ss_pred HHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhhhhh
Q 011501 159 LLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEIT 238 (484)
Q Consensus 159 l~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~ 238 (484)
|+.++.+ ++++|+.|.|+++|+++|.+.+..+++++|++.++++.| ++++++.+++ +.+...|+.++..
T Consensus 153 l~~~g~~-------~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G-~~~~~~~~~~---~~~~~~s~~~~~~ 221 (302)
T 2h78_A 153 FEAMGRN-------IFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANG-LEAKVLAEIM---RRSSGGNWALEVY 221 (302)
T ss_dssp HHHHEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---HTSTTCCHHHHHC
T ss_pred HHHhCCC-------eEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHH---HcCCCCCHHHHHh
Confidence 9999976 489999999999999999999999999999999999998 9999999987 4566778888877
Q ss_pred cc-------ccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHh
Q 011501 239 AD-------IFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLS 294 (484)
Q Consensus 239 ~~-------~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s 294 (484)
.+ .+.. ++|.++|.++.+.||++ .+++.|+++|+|+|+...+ .+.+..
T Consensus 222 ~~~~g~~~~~~~~-~~~~~g~~~~~~~kD~~------~~~~~a~~~g~~~p~~~~~-~~~~~~ 276 (302)
T 2h78_A 222 NPWPGVMENAPAS-RDYSGGFMAQLMAKDLG------LAQEAAQASASSTPMGSLA-LSLYRL 276 (302)
T ss_dssp CCSTTTSTTSGGG-GTTCSSSBHHHHHHHHH------HHHHHHHHHTCCCHHHHHH-HHHHHH
T ss_pred CCCcccccccccC-CCCCCCCcHHHHHHHHH------HHHHHHHHcCCCChHHHHH-HHHHHH
Confidence 66 4444 45788999999999986 8899999999999987754 455443
No 17
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=100.00 E-value=5e-35 Score=291.57 Aligned_cols=261 Identities=13% Similarity=0.136 Sum_probs=224.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++|||||+|.||.+||.+|+++|++|++|||++++.+.+.+.+ +..+.+++++++. +|+||+|||++.+
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~~~~~~e~~~~---aDvVi~~vp~~~~ 78 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAG-------AHLCESVKAALSA---SPATIFVLLDNHA 78 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT-------CEECSSHHHHHHH---SSEEEECCSSHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCC-------CeecCCHHHHHhc---CCEEEEEeCCHHH
Confidence 46899999999999999999999999999999999998887653 4678899999988 9999999999877
Q ss_pred HHHHHH--HHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCC-ccccCCCHHHHHHHHHHH
Q 011501 83 VDQTIK--TLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGP-SLMPGGSFEAYKHIEDIL 159 (484)
Q Consensus 83 v~~vl~--~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll 159 (484)
+++++. .+.+ +.+|++|||+||+.|..++++.+.+.++|++|+++||+|+++.+..+. .+++||+++++++++++|
T Consensus 79 ~~~v~~~~~l~~-~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~~~~~~~~~i~~gg~~~~~~~~~~ll 157 (306)
T 3l6d_A 79 THEVLGMPGVAR-ALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHSIHTGDREAFEQHRALL 157 (306)
T ss_dssp HHHHHTSTTHHH-HTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGGGTTCTTCEEEEEECHHHHHHHHHHH
T ss_pred HHHHhcccchhh-ccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcccccCCceEEEEcCCHHHHHHHHHHH
Confidence 898886 6644 568999999999999999999999999999999999999987776666 899999999999999999
Q ss_pred HHHhccCCCCCCceEEe--CC-chhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhhh
Q 011501 160 LKVAAQVPDSGPCVTYV--GK-GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIE 236 (484)
Q Consensus 160 ~~i~~~~~~~~~~~~~~--G~-~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~ 236 (484)
+.++.+ ++++ |+ .|+|+.+| .+.++.+++++|++.++++.| +|++++.+++..+.. .+.|++++
T Consensus 158 ~~lg~~-------~~~~~~g~~~g~g~~~k----~~~~~~~~~~~Ea~~la~~~G-ld~~~~~~~~~~~~~-~~~s~~~~ 224 (306)
T 3l6d_A 158 EGLAGH-------TVFLPWDEALAFATVLH----AHAFAAMVTFFEAVGAGDRFG-LPVSKTARLLLETSR-FFVADALE 224 (306)
T ss_dssp HTTCSE-------EEECCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHH-HHHHHHHH
T ss_pred HHhcCC-------EEEecCCCCccHHHHHH----HHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHhhh-hcccHHHH
Confidence 999765 5999 87 79999999 566788999999999999999 999999999854310 15788888
Q ss_pred hhccccccccCCCCc-hhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHhc
Q 011501 237 ITADIFGIKDDKGDG-YLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSG 295 (484)
Q Consensus 237 ~~~~~l~~~~~~~~~-~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s~ 295 (484)
...+.+..+ +|.++ |.++...||+. ++++.|++.|+|+|++..+ .+.+..+
T Consensus 225 ~~~~~~~~~-~~~~~~~~~~~~~KDl~------~~~~~a~~~g~~~p~~~~~-~~~~~~a 276 (306)
T 3l6d_A 225 EAVRRLETQ-DFKGDQARLDVHADAFA------HIAQSLHAQGVWTPVFDAV-CQVVQRA 276 (306)
T ss_dssp HHHHHHHHT-CCCTTSSBHHHHHHHHH------HHHHHHHHTTCCCHHHHHH-HHHHHHH
T ss_pred HHHHHHhcC-CCCCCcccHHHHHHHHH------HHHHHHHHcCCCchHHHHH-HHHHHHH
Confidence 777666543 57764 78999999986 8999999999999987754 5655544
No 18
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=100.00 E-value=3.7e-33 Score=278.80 Aligned_cols=255 Identities=13% Similarity=0.096 Sum_probs=209.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCC--hhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRT--TSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~--~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
+|+|||||+|.||.+||.+|+++|+ +|++|||+ +++.+.+.+.+ +..+.+++++++. +|+||+|||+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g-------~~~~~~~~e~~~~---aDvVi~~vp~ 93 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELG-------VSCKASVAEVAGE---CDVIFSLVTA 93 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTT-------CEECSCHHHHHHH---CSEEEECSCT
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCC-------CEEeCCHHHHHhc---CCEEEEecCc
Confidence 5799999999999999999999999 99999997 46666665432 5678899999888 9999999999
Q ss_pred CchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHc--CCeEEeccCCCCHHhhhcCC-ccccCCCHHHHHHHH
Q 011501 80 GSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAEL--GLLYLGMGVSGGEEGARYGP-SLMPGGSFEAYKHIE 156 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~--g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~ 156 (484)
+. ..++++++.+.+.++++|||+||+.|.+++++.+.+.++ |++|+++|++|++..+ .|. .+++||+.+ +.++
T Consensus 94 ~~-~~~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~~~-~g~l~i~vgg~~~--~~~~ 169 (312)
T 3qsg_A 94 QA-ALEVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVKPH-GHRVPLVVDGDGA--RRFQ 169 (312)
T ss_dssp TT-HHHHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEECSCSTTT-GGGSEEEEESTTH--HHHH
T ss_pred hh-HHHHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccccCCchhh-cCCEEEEecCChH--HHHH
Confidence 85 455779999999999999999999999999999998888 9999999999976654 566 889999877 8999
Q ss_pred HHHHHHhccCCCCCCceEEeCC-chhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhh
Q 011501 157 DILLKVAAQVPDSGPCVTYVGK-GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLI 235 (484)
Q Consensus 157 ~ll~~i~~~~~~~~~~~~~~G~-~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~ 235 (484)
++|+.++.+ ++++|+ .|+|+.+|+++|.+.++.+++++|++.++++.| +++ ++.+.+. .+. .++.+
T Consensus 170 ~ll~~~g~~-------~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~G-ld~-~~~~~l~---~~~-~~~~~ 236 (312)
T 3qsg_A 170 AAFTLYGCR-------IEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAAAEKMG-LAD-RVLASLD---ASF-PEHHL 236 (312)
T ss_dssp HHHHTTTCE-------EEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CHH-HHHHHHH---HHS-GGGTH
T ss_pred HHHHHhCCC-------eEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCH-HHHHHHH---hcC-CchhH
Confidence 999999976 589998 899999999999999999999999999999999 999 5666663 332 24444
Q ss_pred hhhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHhc
Q 011501 236 EITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSG 295 (484)
Q Consensus 236 ~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s~ 295 (484)
+...+.+.. ++|.++|.+ .||++ .+++.|++.|+|+|++..+ .+.+...
T Consensus 237 ~~~~~~~~~-~~~~~g~~~---~KDl~------~~~~~a~~~g~~~pl~~~~-~~~~~~~ 285 (312)
T 3qsg_A 237 RDLALYLVE-RNLEHADRR---AHELG------EVAATLCSVGVEPLVAEAG-YRRLTRV 285 (312)
T ss_dssp HHHHHHHHH-HHHHHHHHH---HHHHH------HHHHHHHHTTCCCHHHHHH-HHHHHHH
T ss_pred HHhhhHhhc-CCCCcccch---HHHHH------HHHHHHHHcCCCcHHHHHH-HHHHHHH
Confidence 444444433 246666765 46664 7899999999999987754 4554443
No 19
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=100.00 E-value=9e-33 Score=276.50 Aligned_cols=252 Identities=14% Similarity=0.134 Sum_probs=201.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCC-CcEEEEeCCh-------hHHHHHHHHhhhcCCCCeeecC-CHhHHHhhcCCCcEE
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKG-FPISVYNRTT-------SKVDETVERAKQEGNLPLYGFH-DPESFVHSIQKPRVI 73 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G-~~V~v~dr~~-------~~~~~~~~~~~~~~~~~~~~~~-s~~e~~~~l~~advI 73 (484)
+|+|||||+|.||.+||.+|+++| ++|++|||++ +..+.+.+. ++ +. +++++++. +|+|
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~-------g~--~~~s~~e~~~~---aDvV 91 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAEL-------GV--EPLDDVAGIAC---ADVV 91 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHT-------TC--EEESSGGGGGG---CSEE
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHC-------CC--CCCCHHHHHhc---CCEE
Confidence 468999999999999999999999 9999999998 333433322 23 56 78888887 9999
Q ss_pred EEecCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCC-ccccCCCHHHH
Q 011501 74 IMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGP-SLMPGGSFEAY 152 (484)
Q Consensus 74 i~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~~~ 152 (484)
|+|||++.. .++++++.+.++++++|||+||+.|.+++++.+.+.++|+.|+++|++|++ .+..|. ++++||+.+
T Consensus 92 i~avp~~~~-~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~-~a~~g~l~i~vgg~~~-- 167 (317)
T 4ezb_A 92 LSLVVGAAT-KAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARV-PPYAEKVPILVAGRRA-- 167 (317)
T ss_dssp EECCCGGGH-HHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCS-TTTGGGSEEEEESTTH--
T ss_pred EEecCCHHH-HHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCc-hhhcCCEEEEEeCChH--
Confidence 999999854 456689999999999999999999999999999999899999999999964 555666 889999877
Q ss_pred HHHHHHHHHHhccCCCCCCceEEeCC-chhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCc-c
Q 011501 153 KHIEDILLKVAAQVPDSGPCVTYVGK-GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGE-L 230 (484)
Q Consensus 153 ~~v~~ll~~i~~~~~~~~~~~~~~G~-~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~-~ 230 (484)
+.++++|+.++.+ ++++|+ .|+|+.+|+++|.+.++.+++++|++.++++.| ++++ +.+.+. .+. .
T Consensus 168 ~~~~~ll~~~g~~-------v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~G-id~~-~~~~l~---~~~~~ 235 (317)
T 4ezb_A 168 VEVAERLNALGMN-------LEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAG-VTER-ILDSVQ---ETFPG 235 (317)
T ss_dssp HHHHHHHHTTTCE-------EEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CHHH-HHHHHH---HHSTT
T ss_pred HHHHHHHHHhCCC-------eEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHH-HHHHHH---hcCcc
Confidence 8999999999965 599998 899999999999999999999999999999999 9995 444442 222 2
Q ss_pred hhhhhhhhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHhc
Q 011501 231 LSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSG 295 (484)
Q Consensus 231 ~s~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s~ 295 (484)
.+| ....+.+.. ++|.++|.+ .||++ .+++.|+++|+|+|++..+ .+.+..+
T Consensus 236 ~~~--~~~~~~~~~-~~~~~g~~~---~KDl~------~~~~~a~~~g~~~pl~~~~-~~~~~~a 287 (317)
T 4ezb_A 236 LDW--RDVADYYLS-RTFEHGARR---VTEMT------EAAETIESFGLNAPMSRAA-CETIAAA 287 (317)
T ss_dssp SCH--HHHHHHHHH-HHHHHHHHH---HHHHH------HHHHHHHTTTCCCHHHHHH-HHHHHHH
T ss_pred ccH--HHhhhhhhc-CCCCCCcch---HHHHH------HHHHHHHHcCCCChHHHHH-HHHHHHH
Confidence 233 222333332 235556653 66764 7899999999999987754 5554443
No 20
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=100.00 E-value=1.2e-31 Score=265.94 Aligned_cols=261 Identities=19% Similarity=0.283 Sum_probs=223.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
|+|+|||+|.||..++.+|.++|++|.+|||++++.+.+.+.+ +..+.+++++++. +|+||+|+|++.++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~---~D~vi~~v~~~~~~ 75 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAG-------AETASTAKAIAEQ---CDVIITMLPNSPHV 75 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CEECSSHHHHHHH---CSEEEECCSSHHHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCC-------CeecCCHHHHHhC---CCEEEEECCCHHHH
Confidence 6999999999999999999999999999999999988876642 5667889898887 99999999988788
Q ss_pred HHHH---HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCC-ccccCCCHHHHHHHHHHH
Q 011501 84 DQTI---KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGP-SLMPGGSFEAYKHIEDIL 159 (484)
Q Consensus 84 ~~vl---~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll 159 (484)
+.++ +++.+.+.++++||++++..+.+.+++.+.+.+.|++|+++|+++++..+..+. .+++||+++.++.++++|
T Consensus 76 ~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 155 (299)
T 1vpd_A 76 KEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLM 155 (299)
T ss_dssp HHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHH
T ss_pred HHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEecCCCCHhHHhcCCEEEEeCCCHHHHHHHHHHH
Confidence 8888 678888999999999999998888888888888899999999999988888888 888899999999999999
Q ss_pred HHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhhhhhc
Q 011501 160 LKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITA 239 (484)
Q Consensus 160 ~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~~ 239 (484)
+.++.+ ++++++.|.+.++|+++|.+.+..+++++|++.++++.| ++++++.+++ ..+...++.+....
T Consensus 156 ~~~g~~-------~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G-~~~~~~~~~~---~~~~~~s~~~~~~~ 224 (299)
T 1vpd_A 156 KAMAGS-------VVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAG-VNPDLVYQAI---RGGLAGSTVLDAKA 224 (299)
T ss_dssp HTTEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---TTSTTCCHHHHHHH
T ss_pred HHHcCC-------eEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHH---HccCCCCHHHHHhh
Confidence 999975 488899999999999999999999999999999999999 9999988876 44555566665444
Q ss_pred cccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHH
Q 011501 240 DIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFL 293 (484)
Q Consensus 240 ~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~ 293 (484)
+.+.. +++.+++.++.+.++++ ++++.|+++|+|+|+... +++.+.
T Consensus 225 ~~~l~-~~~~~g~~~~~~~kd~~------~~~~~a~~~gv~~p~~~~-~~~~~~ 270 (299)
T 1vpd_A 225 PMVMD-RNFKPGFRIDLHIKDLA------NALDTSHGVGAQLPLTAA-VMEMMQ 270 (299)
T ss_dssp HHHHT-TCCCCSSBHHHHHHHHH------HHHHHHHHHTCCCHHHHH-HHHHHH
T ss_pred hHhhc-CCCCCCCChHHHHHHHH------HHHHHHHHcCCCChHHHH-HHHHHH
Confidence 44333 34677788998888765 889999999999998765 344433
No 21
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.98 E-value=4.5e-31 Score=261.98 Aligned_cols=263 Identities=23% Similarity=0.364 Sum_probs=224.4
Q ss_pred CC-CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 1 MV-QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 1 M~-~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
|+ +|+|+|||+|.||..++.+|++.|++|++|||++++.+.+.+.+ +..+.+++++++. +|+||+|+|.
T Consensus 1 M~~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~---~D~vi~~vp~ 70 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQG-------AQACENNQKVAAA---SDIIFTSLPN 70 (301)
T ss_dssp ---CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTT-------CEECSSHHHHHHH---CSEEEECCSS
T ss_pred CCCCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC-------CeecCCHHHHHhC---CCEEEEECCC
Confidence 53 47999999999999999999999999999999999888776532 5677889998887 9999999998
Q ss_pred CchHHHHHH---HHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCC-ccccCCCHHHHHHH
Q 011501 80 GSPVDQTIK---TLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGP-SLMPGGSFEAYKHI 155 (484)
Q Consensus 80 ~~~v~~vl~---~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v 155 (484)
+.+++.++. ++.+.+.++++||++++..|.+..++.+.+.++|++|+++|+++++..+..|. .+++||+++.++.+
T Consensus 71 ~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~a~~g~~~~~~~g~~~~~~~v 150 (301)
T 3cky_A 71 AGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAPVSGGTKGAEAGTLTIMVGASEAVFEKI 150 (301)
T ss_dssp HHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHH
T ss_pred HHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEccCCCCHHHHHcCCeEEEECCCHHHHHHH
Confidence 878888885 78888999999999999998888888888888899999999999998888888 78889999999999
Q ss_pred HHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhh
Q 011501 156 EDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLI 235 (484)
Q Consensus 156 ~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~ 235 (484)
+++|+.++.+ ++++++.|+|..+|+++|.+.+..++++.|++.++++.| ++++++.+++. .+...++.+
T Consensus 151 ~~ll~~~g~~-------~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G-~~~~~~~~~~~---~~~~~~~~~ 219 (301)
T 3cky_A 151 QPVLSVIGKD-------IYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCG-LKPETMQEIIG---KSSGRSYAM 219 (301)
T ss_dssp HHHHHHHEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH---TSTTCBHHH
T ss_pred HHHHHHhcCC-------EEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH---cCCCCCHHH
Confidence 9999999975 478899999999999999999999999999999999998 99999988874 344456666
Q ss_pred hhhcc-ccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHH
Q 011501 236 EITAD-IFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARF 292 (484)
Q Consensus 236 ~~~~~-~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~ 292 (484)
....+ .+.. +++.+++.++.+.||++ ++++.++++|+|+|+... +++.+
T Consensus 220 ~~~~~~~~l~-~~~~~g~~~~~~~kd~~------~~~~~a~~~gv~~p~~~~-~~~~~ 269 (301)
T 3cky_A 220 EAKMEKFIMS-GDFAGGFAMDLQHKDLG------LALEAGKEGNVPLPMTAM-ATQIF 269 (301)
T ss_dssp HHHCCCCCCT-CCCSSSSBHHHHHHHHH------HHHHHHHHHTCCCHHHHH-HHHHH
T ss_pred HHhhhhhhhc-CCCCCCccHHHHHHHHH------HHHHHHHHhCCCChHHHH-HHHHH
Confidence 55555 3332 34677889999998875 889999999999998764 44444
No 22
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.97 E-value=1.2e-30 Score=258.21 Aligned_cols=263 Identities=19% Similarity=0.270 Sum_probs=220.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
|+|+|||+|.||..+|.+|+++|++|++|||++++.+.+.+. ++..+.+++++++. +|+||+|+|.+.++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~---~Dvvi~~vp~~~~~ 70 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDA-------GEQVVSSPADVAEK---ADRIITMLPTSINA 70 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTT-------TCEECSSHHHHHHH---CSEEEECCSSHHHH
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-------CCeecCCHHHHHhc---CCEEEEeCCCHHHH
Confidence 489999999999999999999999999999999998877653 25677899998887 99999999988788
Q ss_pred HHHHHH---HhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCC-ccccCCCHHHHHHHHHHH
Q 011501 84 DQTIKT---LSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGP-SLMPGGSFEAYKHIEDIL 159 (484)
Q Consensus 84 ~~vl~~---l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll 159 (484)
+.++.+ +.+.+.++++||++++..+.+.+++.+.+.++|..|+++|+++++..+..|. .+++|++++.++.++++|
T Consensus 71 ~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~~~~~p~~~g~~~a~~~~~~~~~~~~~~~~~~v~~l~ 150 (296)
T 2gf2_A 71 IEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELL 150 (296)
T ss_dssp HHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESHHHHHHHTCEEEEEESCGGGHHHHHHHH
T ss_pred HHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCCCCChhHHhcCcEEEEeCCCHHHHHHHHHHH
Confidence 888875 4557788999999999998888888777777899999999999988888888 888999999999999999
Q ss_pred HHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhhhhhc
Q 011501 160 LKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITA 239 (484)
Q Consensus 160 ~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~~ 239 (484)
+.++.+ ++++++.|+|+..|+++|.+.+..+.+++|++.++++.| ++++++.+++. .+.+.++++....
T Consensus 151 ~~~g~~-------~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G-~~~~~~~~~~~---~~~~~~~~~~~~~ 219 (296)
T 2gf2_A 151 GCMGSN-------VVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLG-LDPKLLAKILN---MSSGRCWSSDTYN 219 (296)
T ss_dssp TTTEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH---TSTTCBHHHHHSC
T ss_pred HHHcCC-------eEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH---hCcccCHHHHhcC
Confidence 999975 488888999999999999999999999999999999999 99999988874 3445566665432
Q ss_pred c---ccc---cccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHh
Q 011501 240 D---IFG---IKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLS 294 (484)
Q Consensus 240 ~---~l~---~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s 294 (484)
+ .+. .+.++.++|.++.+.||++ ++++.|+++|+|+|+... +++.+..
T Consensus 220 ~~~~~l~~s~~~~~~~~g~~~~~~~kd~~------~~~~~a~~~gv~~p~~~~-~~~~~~~ 273 (296)
T 2gf2_A 220 PVPGVMDGVPSANNYQGGFGTTLMAKDLG------LAQDSATSTKSPILLGSL-AHQIYRM 273 (296)
T ss_dssp SSTTTCSSSGGGGTTCSSSBHHHHHHHHH------HHHHHHHHTTCCCHHHHH-HHHHHHH
T ss_pred CcccccccchhccCCCCCCchHHHHHHHH------HHHHHHHHcCCCChHHHH-HHHHHHH
Confidence 1 211 1234677889999988875 899999999999998765 4554443
No 23
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.97 E-value=1.3e-30 Score=257.84 Aligned_cols=260 Identities=22% Similarity=0.330 Sum_probs=221.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
||+|+|||+|.||..+|.+|+++|++|++|| ++++.+.+.+.+ +..+.+++++++. +|+||+|+|.+.+
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g-------~~~~~~~~~~~~~---~D~vi~~vp~~~~ 71 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLG-------AVNVETARQVTEF---ADIIFIMVPDTPQ 71 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTT-------CBCCSSHHHHHHT---CSEEEECCSSHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcC-------CcccCCHHHHHhc---CCEEEEECCCHHH
Confidence 4699999999999999999999999999999 988887776532 4567789888877 9999999999877
Q ss_pred HHHHHH---HHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCC-ccccCCCHHHHHHHHHH
Q 011501 83 VDQTIK---TLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGP-SLMPGGSFEAYKHIEDI 158 (484)
Q Consensus 83 v~~vl~---~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~l 158 (484)
++.++. ++.+.+.++++||++++..+.+.+++.+.+.++|++|+++|+++++..+..|. .+++||+++.++.++++
T Consensus 72 ~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~a~~g~~~~~~~~~~~~~~~~~~l 151 (295)
T 1yb4_A 72 VEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMGADYLDAPVSGGEIGAREGTLSIMVGGEQKVFDRVKPL 151 (295)
T ss_dssp HHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEccCCCCHHHHHcCCeEEEECCCHHHHHHHHHH
Confidence 888887 78888889999999999998888888888887899999999999988888888 78889999999999999
Q ss_pred HHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhhhhh
Q 011501 159 LLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEIT 238 (484)
Q Consensus 159 l~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~ 238 (484)
|+.++.+ ++++++.|.+..+|+++|.+.+..++++.|++.++++.| ++++++.+++ ..+...++.+...
T Consensus 152 l~~~g~~-------~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G-~~~~~~~~~~---~~~~~~s~~~~~~ 220 (295)
T 1yb4_A 152 FDILGKN-------ITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAG-ADPVRVRQAL---MGGFASSRILEVH 220 (295)
T ss_dssp HHHHEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---TSSSSCBHHHHHH
T ss_pred HHHhcCC-------EEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHH---HcCCCCCHHHHHh
Confidence 9999976 488899999999999999999999999999999999999 9999988876 4455556665544
Q ss_pred ccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHH
Q 011501 239 ADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARF 292 (484)
Q Consensus 239 ~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~ 292 (484)
.+.+.. +++++++..+.+.+|++ +.++.++++|+|+|++.. +.+.+
T Consensus 221 ~~~~~~-~~~~~g~~~~~~~kd~~------~~~~~a~~~g~~~p~~~~-~~~~~ 266 (295)
T 1yb4_A 221 GERMIN-RTFEPGFKIALHQKDLN------LALQSAKALALNLPNTAT-CQELF 266 (295)
T ss_dssp HHHHHT-TCCCCSSBHHHHHHHHH------HHHHHHHHTTCCCHHHHH-HHHHH
T ss_pred hHHHhc-CCCCCCCchHHHHHHHH------HHHHHHHHcCCCChHHHH-HHHHH
Confidence 443433 34677888888888874 889999999999998764 34443
No 24
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.97 E-value=6.2e-30 Score=255.76 Aligned_cols=262 Identities=16% Similarity=0.269 Sum_probs=220.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+|+|+|||+|.||..+|.+|++.|++|++|||++++.+.+.+.+ +..+.+++++++. +|+||+|+|++.+
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~---~DvVi~av~~~~~ 99 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEG-------ARLGRTPAEVVST---CDITFACVSDPKA 99 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTT-------CEECSCHHHHHHH---CSEEEECCSSHHH
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcC-------CEEcCCHHHHHhc---CCEEEEeCCCHHH
Confidence 37899999999999999999999999999999999888776532 4567788888887 9999999997778
Q ss_pred HHHHHHHH---hhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCC-ccccCCCHHHHHHHHHH
Q 011501 83 VDQTIKTL---SVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGP-SLMPGGSFEAYKHIEDI 158 (484)
Q Consensus 83 v~~vl~~l---~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~l 158 (484)
+++++.++ .+.+.++++||+++|..+....++.+.+..++..|+++|+++++..+..|+ .++++|+++.++.++++
T Consensus 100 ~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g~~~~~~~g~~~~~~~g~~~~~~~v~~l 179 (316)
T 2uyy_A 100 AKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSC 179 (316)
T ss_dssp HHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEEEEEECHHHHHHTHHH
T ss_pred HHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCccCChhHHhhCCEEEEeCCCHHHHHHHHHH
Confidence 88888754 477889999999999998888888888877899999999999998888898 77888899999999999
Q ss_pred HHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhhhhh
Q 011501 159 LLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEIT 238 (484)
Q Consensus 159 l~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~ 238 (484)
|+.++.+ ++++|+.+.+...|++.|.+....+.++.|++.++++.| ++++++.+++. .+...++.+...
T Consensus 180 l~~~g~~-------~~~~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~~~G-~~~~~~~~~~~---~~~~~s~~~~~~ 248 (316)
T 2uyy_A 180 FQAMGKT-------SFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTG-QSQQTLLDILN---QGQLASIFLDQK 248 (316)
T ss_dssp HHHHEEE-------EEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH---HSTTCCHHHHHH
T ss_pred HHHhcCC-------EEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH---cCCCCCHHHHHh
Confidence 9999975 478888999999999999999999999999999999998 99999988874 444455555443
Q ss_pred ccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHH
Q 011501 239 ADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFL 293 (484)
Q Consensus 239 ~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~ 293 (484)
.+.+.. +++++++.++.+.+|++ ++++.++++|+|+|+... +++.+.
T Consensus 249 ~~~~l~-~~~~~g~~~~~~~kd~~------~~~~~a~~~gv~~p~~~~-v~~~~~ 295 (316)
T 2uyy_A 249 CQNILQ-GNFKPDFYLKYIQKDLR------LAIALGDAVNHPTPMAAA-ANEVYK 295 (316)
T ss_dssp HHHHHH-TCCCCSSBHHHHHHHHH------HHHHHHHHTTCCCHHHHH-HHHHHH
T ss_pred hHHhhc-CCCCCCCcHHHHHHHHH------HHHHHHHHhCCCChHHHH-HHHHHH
Confidence 333332 34677888998888875 889999999999998764 444443
No 25
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.97 E-value=1.9e-30 Score=255.83 Aligned_cols=257 Identities=25% Similarity=0.305 Sum_probs=218.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
|+|+|||+|.||..+|.+|++ |++|++|||++++.+.+.+.+ +..++ +++++.. +|+||+|+|++.++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g-------~~~~~-~~~~~~~---~D~vi~~v~~~~~~ 69 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEF-------GSEAV-PLERVAE---ARVIFTCLPTTREV 69 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHH-------CCEEC-CGGGGGG---CSEEEECCSSHHHH
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCC-------CcccC-HHHHHhC---CCEEEEeCCChHHH
Confidence 589999999999999999999 999999999999988877654 23344 6676666 99999999998678
Q ss_pred HHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCC-ccccCCCHHHHHHHHHHHHHH
Q 011501 84 DQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGP-SLMPGGSFEAYKHIEDILLKV 162 (484)
Q Consensus 84 ~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll~~i 162 (484)
+.+++++.+.+.++++||++|+..+...+++.+.+.++|++|+++|+++++..+..|+ .+++|++++.++.++++| .+
T Consensus 70 ~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll-~~ 148 (289)
T 2cvz_A 70 YEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAGTLTVMLGGPEEAVERVRPFL-AY 148 (289)
T ss_dssp HHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHGGGC-TT
T ss_pred HHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEecCCCChhHHhhCCeEEEECCCHHHHHHHHHHH-hh
Confidence 9999999888999999999999998888888888887889999999999998888888 788899999999999999 99
Q ss_pred hccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhhhhhcc--
Q 011501 163 AAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITAD-- 240 (484)
Q Consensus 163 ~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~~~-- 240 (484)
+.+ ++++++.+.++.+|+++|.+.+..+++++|++.++++.| ++++++.+++ ..+...+++++...+
T Consensus 149 g~~-------~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G-~~~~~~~~~~---~~~~~~s~~~~~~~~~~ 217 (289)
T 2cvz_A 149 AKK-------VVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQG-VSAEKALEVI---NASSGRSNATENLIPQR 217 (289)
T ss_dssp EEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---TTSTTCBHHHHHTHHHH
T ss_pred cCC-------eEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cCHHHHHHHH---HccCCCCHHHHHhccch
Confidence 865 488898999999999999999999999999999999998 9999988887 345555666665544
Q ss_pred ccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHH
Q 011501 241 IFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFL 293 (484)
Q Consensus 241 ~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~ 293 (484)
++. +++++++.++.+.||++ ++++.++++|+|+|+..+ +.+.+.
T Consensus 218 ~l~--~~~~~g~~~~~~~kd~~------~~~~~a~~~gv~~p~~~~-v~~~~~ 261 (289)
T 2cvz_A 218 VLT--RAFPKTFALGLLVKDLG------IAMGVLDGEKAPSPLLRL-AREVYE 261 (289)
T ss_dssp TTT--SCCCCSSBHHHHHHHHH------HHHHHHTTTCCCCHHHHH-HHHHHH
T ss_pred hhc--CCCCCCcChHHHHHHHH------HHHHHHHHcCCCChHHHH-HHHHHH
Confidence 433 34677889999988875 889999999999998764 455443
No 26
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.96 E-value=1.9e-28 Score=254.55 Aligned_cols=254 Identities=17% Similarity=0.174 Sum_probs=198.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhh---------------hcCCCCeeecCCHhHHHhhcC
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK---------------QEGNLPLYGFHDPESFVHSIQ 68 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~---------------~~~~~~~~~~~s~~e~~~~l~ 68 (484)
.+|+|||+|.||.+||.+|+++||+|++||+++++++.+.+... ..+ +++.+++++++++.
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g--~l~~ttd~~ea~~~-- 84 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAG--RLSFTTDLAEGVKD-- 84 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTT--CEEEESCHHHHHTT--
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccC--CEEEECCHHHHHhc--
Confidence 48999999999999999999999999999999999988765210 011 46788899888887
Q ss_pred CCcEEEEecCCCc----------hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhh
Q 011501 69 KPRVIIMLVKAGS----------PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGAR 138 (484)
Q Consensus 69 ~advIi~~vp~~~----------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~ 138 (484)
+|+||+|||++. .++++++++.+.+++|++||++||+.|.+++++.+.+.+.+.. .+.++.++|+.++
T Consensus 85 -aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~~-~d~~v~~~Pe~a~ 162 (446)
T 4a7p_A 85 -ADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVAPN-SGAKVVSNPEFLR 162 (446)
T ss_dssp -CSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHSTT-SCCEEEECCCCCC
T ss_pred -CCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCC-CCceEEeCccccc
Confidence 999999999875 4899999999999999999999999999999998888776432 3344444444444
Q ss_pred cCC---------ccccCCC-HHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 011501 139 YGP---------SLMPGGS-FEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLK 208 (484)
Q Consensus 139 ~g~---------~i~~gg~-~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~ 208 (484)
+|. .+++|++ +++.+.++++|+.+..+ ...++++++.++|+++|+++|.+.+..+++++|+..+|+
T Consensus 163 eG~a~~d~~~p~~ivvG~~~~~~~~~~~~ly~~~~~~----~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~~ 238 (446)
T 4a7p_A 163 EGAAIEDFKRPDRVVVGTEDEFARQVMREIYRPLSLN----QSAPVLFTGRRTSELIKYAANAFLAVKITFINEIADLCE 238 (446)
T ss_dssp TTSHHHHHHSCSCEEEECSCHHHHHHHHHHHCSCC---------CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCCCEEEEeCCcHHHHHHHHHHHHHHhcC----CCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443 6788885 89999999999887642 001478889999999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHhhccCcchhhhhhhhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHH
Q 011501 209 SVGKLSNEELQQVFSEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESS 287 (484)
Q Consensus 209 ~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~a 287 (484)
+.| +|++++.+++. .++ ++....+.. +++|...-+.||+. +.+..|+++|+++|++.++
T Consensus 239 ~~G-iD~~~v~~~~~---~~~------rig~~~l~p----g~G~gg~c~~KD~~------~l~~~A~~~g~~~~l~~~~ 297 (446)
T 4a7p_A 239 QVG-ADVQEVSRGIG---MDN------RIGGKFLHA----GPGYGGSCFPKDTL------ALMKTAADNETPLRIVEAT 297 (446)
T ss_dssp HTT-CCHHHHHHHHH---TST------TC---CCCC----CSCCCTTTHHHHHH------HHHHHHHHTTCCCHHHHHH
T ss_pred HcC-CCHHHHHHHHh---cCC------CCCCccCCC----CCCcchhhHHHHHH------HHHHHHHhcCCCCHHHHHH
Confidence 999 99999999873 221 111112221 23344445556653 6788999999999998865
No 27
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.96 E-value=1e-27 Score=250.24 Aligned_cols=262 Identities=15% Similarity=0.108 Sum_probs=199.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhh---------------hcCCCCeeecCCHhHHHh
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK---------------QEGNLPLYGFHDPESFVH 65 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~---------------~~~~~~~~~~~s~~e~~~ 65 (484)
|+ |||+|||+|.||.++|.+|+++|++|++||+++++++.+.+... ..+ ++..+++++++++
T Consensus 1 M~-mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~--~l~~t~d~~ea~~ 77 (450)
T 3gg2_A 1 MS-LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAG--RLRFGTEIEQAVP 77 (450)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTT--SEEEESCHHHHGG
T ss_pred CC-CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccC--cEEEECCHHHHHh
Confidence 44 69999999999999999999999999999999999988775210 011 3677889998888
Q ss_pred hcCCCcEEEEecCCCc---------hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCe---EEeccCCCC
Q 011501 66 SIQKPRVIIMLVKAGS---------PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLL---YLGMGVSGG 133 (484)
Q Consensus 66 ~l~~advIi~~vp~~~---------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~---~i~~pv~gg 133 (484)
. +|+||+|||++. .++++++++.++++++++||++||+.|.+++++.+.+.+.+.. ..+.++.++
T Consensus 78 ~---aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~ 154 (450)
T 3gg2_A 78 E---ADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDFDIASN 154 (450)
T ss_dssp G---CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEEC
T ss_pred c---CCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcceeEEec
Confidence 7 999999999985 7899999999999999999999999999999988877664211 123333444
Q ss_pred HHhhhcCC---------ccccCC-CHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHH
Q 011501 134 EEGARYGP---------SLMPGG-SFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEA 203 (484)
Q Consensus 134 ~~~a~~g~---------~i~~gg-~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea 203 (484)
|+.++.|. .+++|| ++++.+.++++|+.+..+ ..++++++.+.++++|+++|.+.+..+++++|+
T Consensus 155 Pe~a~eG~~~~~~~~p~~ivvG~~~~~~~~~~~~l~~~~~~~-----~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~ 229 (450)
T 3gg2_A 155 PEFLKEGNAIDDFMKPDRVVVGVDSDRARELITSLYKPMLLN-----NFRVLFMDIASAEMTKYAANAMLATRISFMNDV 229 (450)
T ss_dssp CCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTTCCS-----CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccchhhhccCCCEEEEEcCCHHHHHHHHHHHHHHhcC-----CCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44443333 577787 589999999999988752 113678889999999999999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHhhccCcchhhhhhhhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcch
Q 011501 204 YDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPT 283 (484)
Q Consensus 204 ~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~ 283 (484)
..++++.| +|++++.+++. .++ ++....+.. +++|...-+.||+. +.+..|+++|+++|+
T Consensus 230 ~~l~~~~G-id~~~v~~~~~---~~~------rig~~~~~p----g~G~gg~c~~KD~~------~l~~~a~~~g~~~~l 289 (450)
T 3gg2_A 230 ANLCERVG-ADVSMVRLGIG---SDS------RIGSKFLYP----GCGYGGSCFPKDVK------ALIRTAEDNGYRMEV 289 (450)
T ss_dssp HHHHHHHT-CCHHHHHHHHH---TST------TTCSSSCCC----SSCCCSSHHHHHHH------HHHHHHHHTTCCCHH
T ss_pred HHHHHHhC-CCHHHHHHHHc---CCC------CCCcccCCC----CCCCCcccHHhhHH------HHHHHHHHcCCCcHH
Confidence 99999999 99999999873 221 111112221 12233445556653 678899999999999
Q ss_pred HHHHHHHHHHh
Q 011501 284 IESSLDARFLS 294 (484)
Q Consensus 284 ~~~av~~r~~s 294 (484)
+.++ .+-+.+
T Consensus 290 ~~~~-~~iN~~ 299 (450)
T 3gg2_A 290 LEAV-ERVNEK 299 (450)
T ss_dssp HHHH-HHHHHH
T ss_pred HHHH-HHHHHH
Confidence 8865 343333
No 28
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.95 E-value=2.3e-27 Score=247.84 Aligned_cols=255 Identities=12% Similarity=0.050 Sum_probs=198.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC-CC-cEEEEeCChh----HHHHHHHHhh-----------------hcCCCCeeecC
Q 011501 2 VQTRIGLAGLAVMGQNLALNIAEK-GF-PISVYNRTTS----KVDETVERAK-----------------QEGNLPLYGFH 58 (484)
Q Consensus 2 ~~~~IgiIGlG~mG~~lA~~L~~~-G~-~V~v~dr~~~----~~~~~~~~~~-----------------~~~~~~~~~~~ 58 (484)
.+|||+|||+|.||.++|.+|+++ || +|++||++++ +++.+.+... ..+ ++..++
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g--~l~~tt 94 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAG--KFECTP 94 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTT--CEEEES
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccC--CeEEeC
Confidence 457999999999999999999999 99 9999999999 8887764110 011 356666
Q ss_pred CHhHHHhhcCCCcEEEEecCCCc-----------hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHH--HcC---
Q 011501 59 DPESFVHSIQKPRVIIMLVKAGS-----------PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVA--ELG--- 122 (484)
Q Consensus 59 s~~e~~~~l~~advIi~~vp~~~-----------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~--~~g--- 122 (484)
+ .+.++. +|+||+|||++. .+..+.+++.+++++|++||++||+.|.+++++.+.+. +.|
T Consensus 95 d-~ea~~~---aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~g~~~ 170 (478)
T 3g79_A 95 D-FSRISE---LDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESGLKA 170 (478)
T ss_dssp C-GGGGGG---CSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHHCCCB
T ss_pred c-HHHHhc---CCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhcCCCc
Confidence 6 566666 999999999873 25677789999999999999999999999999886443 345
Q ss_pred ---CeEEeccCCCCHHhhhc----CCccccCCCHHHHHHHHHHHHHH-hccCCCCCCceEEeCCchhHHHHHHHHHHHHH
Q 011501 123 ---LLYLGMGVSGGEEGARY----GPSLMPGGSFEAYKHIEDILLKV-AAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEY 194 (484)
Q Consensus 123 ---~~~i~~pv~gg~~~a~~----g~~i~~gg~~~~~~~v~~ll~~i-~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~ 194 (484)
+.++++|.++.+..+.. .+.++.|++++.+++++++|+.+ +.. ++++|+.++|+.+|+++|.+.+
T Consensus 171 ~~d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~~~~~~~~~~~ly~~~~~~~-------~~~~~~~~~aE~~Kl~~N~~~a 243 (478)
T 3g79_A 171 GEDFALAHAPERVMVGRLLKNIREHDRIVGGIDEASTKRAVELYSPVLTVG-------QVIPMSATAAEVTKTAENTFRD 243 (478)
T ss_dssp TTTBEEEECCCCCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHGGGCSSC-------CEEEEEHHHHHHHHHHHHHHHH
T ss_pred CCceeEEeCCccCCccchhhhhcCCcEEEEeCCHHHHHHHHHHHhhhccCC-------eEEeCCHHHHHHHHHHHHHHHH
Confidence 47899998877655433 23788999999999999999999 654 4889999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhhhhhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHH
Q 011501 195 GDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQA 274 (484)
Q Consensus 195 ~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A 274 (484)
..+++++|+..+|++.| +|++++.+++. .. +.+++....+..+-.|+ ..-+-||.. +.+..|
T Consensus 244 ~~Ia~~nE~~~l~e~~G-iD~~~v~~~~~---~~----~~~ri~~~~~~PG~G~G----G~c~~KD~~------~l~~~a 305 (478)
T 3g79_A 244 LQIAAINQLALYCEAMG-INVYDVRTGVD---SL----KGEGITRAVLWPGAGVG----GHCLTKDTY------HLERGV 305 (478)
T ss_dssp HHHHHHHHHHHHHHHTT-CCHHHHHHHHH---TS----CCSSSCCCCCCCCSCCC----SSHHHHHHH------HHHHHH
T ss_pred HHHHHHHHHHHHHHHcC-CCHHHHHHHHC---CC----chhhhccccCCCCCCcc----hhhHHHHHH------HHHHHH
Confidence 99999999999999999 99999999873 21 21122222222211122 234455553 677889
Q ss_pred HHcCCC-------cchHHHH
Q 011501 275 ADLSVA-------APTIESS 287 (484)
Q Consensus 275 ~~~gvp-------~p~~~~a 287 (484)
+++|++ .|++.++
T Consensus 306 ~~~g~~~~~~~~~~~li~~~ 325 (478)
T 3g79_A 306 KIGRGELDYPEGADSIYVLA 325 (478)
T ss_dssp TTSSCCCCCCSSCCCHHHHH
T ss_pred HHcCCCcccccchhHHHHHH
Confidence 999987 8888765
No 29
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.95 E-value=7.3e-27 Score=240.69 Aligned_cols=250 Identities=15% Similarity=0.111 Sum_probs=194.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhh-----------hcCCCCeeecCCHhHHHhhcCCCc
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK-----------QEGNLPLYGFHDPESFVHSIQKPR 71 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~-----------~~~~~~~~~~~s~~e~~~~l~~ad 71 (484)
+|||+|||+|.||.++|..|++ |++|++||+++++++.+.+... ..+..+++.+++++++++. +|
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~---aD 111 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRN---AD 111 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTT---CS
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhC---CC
Confidence 5799999999999999999998 9999999999999988765210 0000146778899888887 99
Q ss_pred EEEEecCCCc----------hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcC-
Q 011501 72 VIIMLVKAGS----------PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYG- 140 (484)
Q Consensus 72 vIi~~vp~~~----------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g- 140 (484)
+||+|||++. .++++++++.+ +++|++||+.||+.|.+++++.+.+.+.++ ..+|+++++..+..+
T Consensus 112 vViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v--~~sPe~~~~G~A~~~~ 188 (432)
T 3pid_A 112 YVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNV--IFSPEFLREGRALYDN 188 (432)
T ss_dssp EEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCE--EECCCCCCTTSHHHHH
T ss_pred EEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccE--eecCccCCcchhhhcc
Confidence 9999999872 58888899999 999999999999999999999988876654 449999998777544
Q ss_pred --C-ccccCCCHHHHHHHHHHHHH--HhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCH
Q 011501 141 --P-SLMPGGSFEAYKHIEDILLK--VAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSN 215 (484)
Q Consensus 141 --~-~i~~gg~~~~~~~v~~ll~~--i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~ 215 (484)
| .+++||+++.++++.++|.. ++.. ..+++++.++|+++|+++|.+.+..+++++|+..+|++.| +|+
T Consensus 189 l~p~rIvvG~~~~~~~~~~~ll~~~~~~~~------~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~lae~~G-iD~ 261 (432)
T 3pid_A 189 LHPSRIVIGERSARAERFADLLKEGAIKQD------IPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYAESQG-LNS 261 (432)
T ss_dssp HSCSCEEESSCSHHHHHHHHHHHHHCSSSS------CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCH
T ss_pred cCCceEEecCCHHHHHHHHHHHHhhhccCC------CeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCH
Confidence 3 78999999999999999987 3322 1256678999999999999999999999999999999999 999
Q ss_pred HHHHHHHHhhccCcchhhhhhhhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHH
Q 011501 216 EELQQVFSEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESS 287 (484)
Q Consensus 216 ~~i~~~~~~~~~g~~~s~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~a 287 (484)
+++.+++. .. .. +....+..+-.|++.++.... |.+ .+...|++.+++.++
T Consensus 262 ~~v~~~~~---~d---pr---ig~~~~~pg~G~GG~C~pkD~-----------~~L-~~~~~~~~~~li~~~ 312 (432)
T 3pid_A 262 KQIIEGVC---LD---PR---IGNHYNNPSFGYGGYCLPKDT-----------KQL-LANYESVPNNIIAAI 312 (432)
T ss_dssp HHHHHHHH---TS---TT---TCSSSCCCCSCCCTTTHHHHH-----------HHH-HHHTTTSCCSHHHHH
T ss_pred HHHHHHHc---cC---CC---CCcccCCCCCCCcccchhhhH-----------HHH-HHHhcCCchhHHHHH
Confidence 99999873 21 11 111122222235665554433 222 233468998888766
No 30
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.94 E-value=5.5e-26 Score=238.91 Aligned_cols=257 Identities=12% Similarity=0.088 Sum_probs=198.3
Q ss_pred CC-CCeEEEEcccHHHHHHHHHHHhC--CCcEEEEeCChhHHHHHHHH------------hhhcCCCCeeecCCHhHHHh
Q 011501 1 MV-QTRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVER------------AKQEGNLPLYGFHDPESFVH 65 (484)
Q Consensus 1 M~-~~~IgiIGlG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~~~~~------------~~~~~~~~~~~~~s~~e~~~ 65 (484)
|+ +|||+|||+|.||.++|.+|+++ |++|++||+++++++.+.+. .......++..++++++.++
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~ 81 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIK 81 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHH
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHh
Confidence 54 57999999999999999999999 89999999999998875321 00000013667788888888
Q ss_pred hcCCCcEEEEecCCCch--------------HHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCC
Q 011501 66 SIQKPRVIIMLVKAGSP--------------VDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVS 131 (484)
Q Consensus 66 ~l~~advIi~~vp~~~~--------------v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~ 131 (484)
. +|+||+|||++.. +.++++++.+.+.++++||++||..|.+++++.+.+.+.+..+++.+++
T Consensus 82 ~---aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~ 158 (467)
T 2q3e_A 82 E---ADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVL 158 (467)
T ss_dssp H---CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEE
T ss_pred c---CCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEE
Confidence 7 9999999998754 5677788999999999999999999999988888888776555677777
Q ss_pred CCHHhhhcCC-c--------cccCC-----CHHHHHHHHHHHHHH-hccCCCCCCceEEeCCchhHHHHHHHHHHHHHHH
Q 011501 132 GGEEGARYGP-S--------LMPGG-----SFEAYKHIEDILLKV-AAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGD 196 (484)
Q Consensus 132 gg~~~a~~g~-~--------i~~gg-----~~~~~~~v~~ll~~i-~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~ 196 (484)
++++.+..|. . +++|| ++++.+.++++|+.+ +.. ++++++.++++.+|++.|.+.+..
T Consensus 159 ~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~-------~~~~~~~~~ae~~Kl~~N~~~a~~ 231 (467)
T 2q3e_A 159 SNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPRE-------KILTTNTWSSELSKLAANAFLAQR 231 (467)
T ss_dssp ECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGG-------GEEEECHHHHHHHHHHHHHHHHHH
T ss_pred eCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCC-------eEEecCHHHHHHHHHHHHHHHHHH
Confidence 7777777776 3 77888 788899999999998 544 388889999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhhhhhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHH
Q 011501 197 MQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAAD 276 (484)
Q Consensus 197 ~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~ 276 (484)
+++++|+..++++.| +|++++.+++..+.. +....+..+..|++.+ +.||+. +.+..|++
T Consensus 232 ia~~nE~~~l~~~~G-id~~~v~~~~~~~~~---------~~~~~~~pg~g~gg~c----~~kD~~------~l~~~a~~ 291 (467)
T 2q3e_A 232 ISSINSISALCEATG-ADVEEVATAIGMDQR---------IGNKFLKASVGFGGSC----FQKDVL------NLVYLCEA 291 (467)
T ss_dssp HHHHHHHHHHHHHHT-CCHHHHHHHHHTSTT---------TCSSSCCCCSCCCSSS----HHHHHH------HHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-cCHHHHHHHHcCCCC---------CCccccCCCCCCCCcc----HHHHHH------HHHHHHHH
Confidence 999999999999999 999999998743211 1111222221244433 335553 67788999
Q ss_pred cCCC--cchHHHH
Q 011501 277 LSVA--APTIESS 287 (484)
Q Consensus 277 ~gvp--~p~~~~a 287 (484)
+|+| .+++.++
T Consensus 292 ~g~~~~~~~~~~~ 304 (467)
T 2q3e_A 292 LNLPEVARYWQQV 304 (467)
T ss_dssp TTCHHHHHHHHHH
T ss_pred cCCchHHHHHHHH
Confidence 9987 4555543
No 31
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.94 E-value=4.1e-26 Score=222.04 Aligned_cols=246 Identities=14% Similarity=0.145 Sum_probs=191.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeC--ChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNR--TTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr--~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
|+|+|||+|.||..||.+|+++|++|++||| ++++.+.+.+.+ +. .+++++++. +|+||+|||++.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g-------~~--~~~~~~~~~---aDvvi~~v~~~~ 68 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVG-------VT--ETSEEDVYS---CPVVISAVTPGV 68 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHT-------CE--ECCHHHHHT---SSEEEECSCGGG
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCC-------Cc--CCHHHHHhc---CCEEEEECCCHH
Confidence 4899999999999999999999999999999 777777766542 34 677788776 999999999986
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCCccccCCCHHHHHHHHHHHHH
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLK 161 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll~~ 161 (484)
.++. +.++.+.+++ +|||+++..+.+++++.+.+.+.| |+++|+++++..+..|..++++|+.+ +.+++ |+.
T Consensus 69 ~~~~-~~~~~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~g--~~~~~v~~~~~~~~~g~~~~~~g~~~--~~~~~-l~~ 140 (264)
T 1i36_A 69 ALGA-ARRAGRHVRG--IYVDINNISPETVRMASSLIEKGG--FVDAAIMGSVRRKGADIRIIASGRDA--EEFMK-LNR 140 (264)
T ss_dssp HHHH-HHHHHTTCCS--EEEECSCCCHHHHHHHHHHCSSSE--EEEEEECSCHHHHGGGCEEEEESTTH--HHHHG-GGG
T ss_pred HHHH-HHHHHHhcCc--EEEEccCCCHHHHHHHHHHHhhCC--eeeeeeeCCccccccCCeEEecCCcH--HHhhh-HHH
Confidence 5655 4677777755 999999999888888888777666 89999999998887787677788765 78888 999
Q ss_pred HhccCCCCCCceEEeCC-chhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhhhhhcc
Q 011501 162 VAAQVPDSGPCVTYVGK-GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITAD 240 (484)
Q Consensus 162 i~~~~~~~~~~~~~~G~-~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~~~ 240 (484)
++.+ ++++++ .|.+..+|+++|.+.+..+.+++|++.++++.| ++++ ..+.+. .+.+.+++. .. +
T Consensus 141 ~g~~-------~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G-~~~~-~~~~~~---~~~g~~~~~-~~-~ 206 (264)
T 1i36_A 141 YGLN-------IEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLG-LEED-VLEMLE---YTEGNDFRE-SA-I 206 (264)
T ss_dssp GTCE-------EEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CHHH-HHHHHH---TTSCSSTHH-HH-H
T ss_pred cCCe-------eEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcHH-HHHHHH---HhcCccHHH-HH-H
Confidence 9865 588887 799999999999999999999999999999999 9986 666653 322223332 22 2
Q ss_pred ccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHHhc
Q 011501 241 IFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSG 295 (484)
Q Consensus 241 ~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~s~ 295 (484)
.+.. .++.+++. ..++++ .+++.++++ +|+|++.. +.+.+...
T Consensus 207 ~~~~-~~~~~g~~---~~~~~~------~~~~~a~~~-v~~p~~~~-v~~~~~~~ 249 (264)
T 1i36_A 207 SRLK-SSCIHARR---RYEEMK------EVQDMLAEV-IDPVMPTC-IIRIFDKL 249 (264)
T ss_dssp HHHH-HHHHTHHH---HHHHHH------HHHHHHHTT-SCCSHHHH-HHHHHHHH
T ss_pred HHhc-CCCCcchh---hHHHHH------HHHHHHHHh-cCchHHHH-HHHHHHHH
Confidence 2222 23455554 334543 678999999 99998764 45555444
No 32
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.93 E-value=1.5e-25 Score=236.12 Aligned_cols=256 Identities=15% Similarity=0.118 Sum_probs=193.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC--CCcEEEEeCChhHHHHHHHHhhh---cC---------CCCeeecCCHhHHHhhc
Q 011501 2 VQTRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKQ---EG---------NLPLYGFHDPESFVHSI 67 (484)
Q Consensus 2 ~~~~IgiIGlG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~~~~~~~~---~~---------~~~~~~~~s~~e~~~~l 67 (484)
++|||+|||+|.||.++|.+|+++ |++|++||+++++++.+.+.... .+ ..++..++++++.++.
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~- 86 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAE- 86 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhc-
Confidence 357999999999999999999998 79999999999998887641100 00 0025667788787777
Q ss_pred CCCcEEEEecCCCc--------------hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHH-cCC------eEE
Q 011501 68 QKPRVIIMLVKAGS--------------PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAE-LGL------LYL 126 (484)
Q Consensus 68 ~~advIi~~vp~~~--------------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~-~g~------~~i 126 (484)
+|+||+|||++. .+.++++++.++++++++||++||..|.+++++.+.+.+ .++ .+.
T Consensus 87 --aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~~~d~~v~ 164 (481)
T 2o3j_A 87 --ADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNENLKFQVL 164 (481)
T ss_dssp --CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC----CCEEEE
T ss_pred --CCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcCcCCceEEE
Confidence 999999998874 388888999999999999999999999999988888877 542 245
Q ss_pred eccCCCCHHhhh---cCC-ccccCCCH-----HHHHHHHHHHHHHhc-cCCCCCCceEEeCCchhHHHHHHHHHHHHHHH
Q 011501 127 GMGVSGGEEGAR---YGP-SLMPGGSF-----EAYKHIEDILLKVAA-QVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGD 196 (484)
Q Consensus 127 ~~pv~gg~~~a~---~g~-~i~~gg~~-----~~~~~v~~ll~~i~~-~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~ 196 (484)
.+|....+..+. ..+ .+++||+. ++++.++++|+.++. . ++++++.++++++|++.|.+.+..
T Consensus 165 ~~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~-------~~~~~d~~~ae~~Kl~~N~~~a~~ 237 (481)
T 2o3j_A 165 SNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRN-------RIITTNTWSSELSKLVANAFLAQR 237 (481)
T ss_dssp ECCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGG-------GEEEEEHHHHHHHHHHHHHHHHHH
T ss_pred eCcccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCC-------eEEecCHHHHHHHHHHHHHHHHHH
Confidence 566655443332 223 67788754 678899999999884 4 378888999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhhhhhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHH
Q 011501 197 MQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAAD 276 (484)
Q Consensus 197 ~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~ 276 (484)
+++++|+..++++.| +|++++.+++. .+. ++....+..+..|++. -+.||+. +.+..|++
T Consensus 238 ia~~nE~~~la~~~G-id~~~v~~~~~---~~~------ri~~~~~~pg~g~gg~----c~~KD~~------~l~~~A~~ 297 (481)
T 2o3j_A 238 ISSINSISAVCEATG-AEISEVAHAVG---YDT------RIGSKFLQASVGFGGS----CFQKDVL------SLVYLCES 297 (481)
T ss_dssp HHHHHHHHHHHHHHS-CCHHHHHHHHH---TST------TTCSSSCCCCSCCCSS----SHHHHHH------HHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-cCHHHHHHHHc---cCC------CCCCCCCCCCCccCCc----cHHHHHH------HHHHHHHH
Confidence 999999999999999 99999998873 221 1111122221112333 3445653 67788999
Q ss_pred cCCC--cchHHHH
Q 011501 277 LSVA--APTIESS 287 (484)
Q Consensus 277 ~gvp--~p~~~~a 287 (484)
+|+| +|++.++
T Consensus 298 ~g~~~~~~l~~~~ 310 (481)
T 2o3j_A 298 LNLPQVADYWQGV 310 (481)
T ss_dssp TTCHHHHHHHHHH
T ss_pred cCCCccchHHHHH
Confidence 9999 8988765
No 33
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.93 E-value=3.2e-25 Score=228.85 Aligned_cols=202 Identities=13% Similarity=0.152 Sum_probs=169.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhh---------------cCCCCeeecCCHhHHHhhcC
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQ---------------EGNLPLYGFHDPESFVHSIQ 68 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~---------------~~~~~~~~~~s~~e~~~~l~ 68 (484)
.|..|||+|.||.+||.+|+++||+|++||+++++++.+.+.... .+ ++..+++ ++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g--~l~~ttd-------~~ 82 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSG--KLKVSTT-------PE 82 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTT--CEEEESS-------CC
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccC--ceEEeCc-------hh
Confidence 579999999999999999999999999999999999988752100 00 2333333 23
Q ss_pred CCcEEEEecCCCc-----------hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHH-cC------CeEEeccC
Q 011501 69 KPRVIIMLVKAGS-----------PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAE-LG------LLYLGMGV 130 (484)
Q Consensus 69 ~advIi~~vp~~~-----------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~-~g------~~~i~~pv 130 (484)
.+|+||+|||++. .+..+.+++.+++++|++||+.||+.|.+++++.+.+.+ .| +.++++|.
T Consensus 83 ~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~Pe 162 (431)
T 3ojo_A 83 ASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPE 162 (431)
T ss_dssp CCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTTTEEEEECCC
T ss_pred hCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCCCeEEEECCC
Confidence 4999999999986 267778999999999999999999999999998876544 55 37899998
Q ss_pred CCCHHhhhcC---C-ccccCCCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHH
Q 011501 131 SGGEEGARYG---P-SLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDV 206 (484)
Q Consensus 131 ~gg~~~a~~g---~-~i~~gg~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l 206 (484)
+..+..+..+ | .++.|+++++.+.++++|+.++... +++|+.++|+++|+++|.+.+..+++++|+..+
T Consensus 163 ~~~~G~A~~~~~~p~~Iv~G~~~~~~~~~~~ly~~~~~~~-------~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l 235 (431)
T 3ojo_A 163 RVLPGKILEELVHNNRIIGGVTKACIEAGKRVYRTFVQGE-------MIETDARTAEMSKLMENTYRDVNIALANELTKI 235 (431)
T ss_dssp CCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHTTTCCSC-------EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcchhhcccCCCEEEEeCCHHHHHHHHHHHHHHhCCc-------EEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7765544322 3 7889999999999999999998653 788999999999999999999999999999999
Q ss_pred HHHhCCCCHHHHHHHH
Q 011501 207 LKSVGKLSNEELQQVF 222 (484)
Q Consensus 207 ~~~~g~~~~~~i~~~~ 222 (484)
|++.| +|++++.+++
T Consensus 236 ~e~~G-iD~~~v~~~~ 250 (431)
T 3ojo_A 236 CNNLN-INVLDVIEMA 250 (431)
T ss_dssp HHHTT-CCHHHHHHHH
T ss_pred HHHcC-CCHHHHHHHH
Confidence 99999 9999999987
No 34
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.93 E-value=1.6e-24 Score=227.88 Aligned_cols=261 Identities=15% Similarity=0.105 Sum_probs=195.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhh---------------cCCCCeeecCCHhHHHhhc
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQ---------------EGNLPLYGFHDPESFVHSI 67 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~---------------~~~~~~~~~~s~~e~~~~l 67 (484)
.|||+|||+|.||.++|.+|+++||+|++||+++++++.+.+.+.. .+ ++..++++++.++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~--~l~~ttd~~~a~~~- 84 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAG--RLRFSTDIEAAVAH- 84 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTT--CEEEECCHHHHHHH-
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccC--CEEEECCHHHHhhc-
Confidence 4799999999999999999999999999999999999888753100 01 36777888888777
Q ss_pred CCCcEEEEecCCC---------chHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHc---CCeE-EeccCCCCH
Q 011501 68 QKPRVIIMLVKAG---------SPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAEL---GLLY-LGMGVSGGE 134 (484)
Q Consensus 68 ~~advIi~~vp~~---------~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~---g~~~-i~~pv~gg~ 134 (484)
+|+||+|||++ ..++++++++.++++++++||+.||+.|.+++++.+.+.+. | .| ++.++.++|
T Consensus 85 --aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~~~~~g-~~~~~~~v~~~P 161 (478)
T 2y0c_A 85 --GDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKR-GGDQMFSVVSNP 161 (478)
T ss_dssp --CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHT-TCCCCEEEEECC
T ss_pred --CCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHHHhcCC-CCCccEEEEECh
Confidence 99999999986 68999999999999999999999999999998887777653 3 12 334455555
Q ss_pred HhhhcCC---------ccccCCC-H----HHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHH
Q 011501 135 EGARYGP---------SLMPGGS-F----EAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLI 200 (484)
Q Consensus 135 ~~a~~g~---------~i~~gg~-~----~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~ 200 (484)
+.+..|. .+++|++ + ++.+.++++|+.+..+ ..++++++.+.+++.|++.|.+.+..++++
T Consensus 162 e~~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~ 236 (478)
T 2y0c_A 162 EFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRN-----HERTLYMDVRSAEFTKYAANAMLATRISFM 236 (478)
T ss_dssp CCCCTTCHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHTGGGGSS-----SCCEEEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccceeeccCCCCEEEEEECCCcccHHHHHHHHHHHHHHhcc-----CCeEEcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5444443 5777775 5 7889999999887631 124788889999999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhhhhhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCC
Q 011501 201 AEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVA 280 (484)
Q Consensus 201 ~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp 280 (484)
+|+..++++.| +|++++.+.+.. .+ ++....+..+-.+++.+. .+|.. ..+..|+++|++
T Consensus 237 nE~~~la~~~G-id~~~v~~~i~~------~~---rig~~~~~pG~g~gg~c~----~kD~~------~l~~~A~~~gv~ 296 (478)
T 2y0c_A 237 NELANLADRFG-ADIEAVRRGIGS------DP---RIGYHFLYAGCGYGGSCF----PKDVE------ALIRTADEHGQS 296 (478)
T ss_dssp HHHHHHHHHTT-CCHHHHHHHHHT------ST---TTCSTTCCCSSCCCSSSH----HHHHH------HHHHHHHHTTCC
T ss_pred HHHHHHHHHhC-CCHHHHHHHHhc------CC---ccCcccCCCCcccccCcC----HHHHH------HHHHHHHHcCCC
Confidence 99999999999 999998877631 11 011011111111233322 23332 677899999999
Q ss_pred cchHHHHHHHHHHhc
Q 011501 281 APTIESSLDARFLSG 295 (484)
Q Consensus 281 ~p~~~~av~~r~~s~ 295 (484)
+|++.++ .+.+...
T Consensus 297 ~pl~~~v-~~in~~~ 310 (478)
T 2y0c_A 297 LQILKAV-SSVNATQ 310 (478)
T ss_dssp CHHHHHH-HHHHHHH
T ss_pred cHHHHHH-HHHHHHh
Confidence 9988764 4444443
No 35
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.92 E-value=1.9e-24 Score=225.44 Aligned_cols=253 Identities=17% Similarity=0.187 Sum_probs=187.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhh---------------hcCCCCeeecCCHhHHHhhcC
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK---------------QEGNLPLYGFHDPESFVHSIQ 68 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~---------------~~~~~~~~~~~s~~e~~~~l~ 68 (484)
|||+|||+|.||.++|..|+++|++|++||+++++++.+.+.+. ..+ ++..++++++.++.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g--~l~~t~~~~~~~~~-- 76 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTG--RLSGTTDFKKAVLD-- 76 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTT--CEEEESCHHHHHHT--
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccC--ceEEeCCHHHHhcc--
Confidence 48999999999999999999999999999999999888765210 011 36677888887777
Q ss_pred CCcEEEEecCCCch---------HHHHHHHHhhhcCC---CCEEEecCCCChHH-HHHHHHHHHHc-CCeE-EeccCCCC
Q 011501 69 KPRVIIMLVKAGSP---------VDQTIKTLSVYMEK---GDCIIDGGNEWYEN-TERRQKAVAEL-GLLY-LGMGVSGG 133 (484)
Q Consensus 69 ~advIi~~vp~~~~---------v~~vl~~l~~~l~~---g~iiId~st~~~~~-~~~~~~~l~~~-g~~~-i~~pv~gg 133 (484)
+|+||+|||++.. ++++++++.+.+++ +++||+.||..+.+ .+.+.+.+.+. |..+ ++.++.++
T Consensus 77 -aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~~~v~~~ 155 (436)
T 1mv8_A 77 -SDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTN 155 (436)
T ss_dssp -CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTTBEEEEC
T ss_pred -CCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCcEEEEEC
Confidence 9999999999865 89999999999988 99999999999888 55566666654 5443 33344444
Q ss_pred HHhhhcC--------C-ccccCCC-HHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHH
Q 011501 134 EEGARYG--------P-SLMPGGS-FEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEA 203 (484)
Q Consensus 134 ~~~a~~g--------~-~i~~gg~-~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea 203 (484)
++....| + .++.|++ +++.+.++++++.++.. +++++.+.++.+|++.|.+.+..+++++|+
T Consensus 156 Pe~~~~G~~~~~~~~~~~iv~G~~~~~~~~~~~~l~~~~~~~--------v~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~ 227 (436)
T 1mv8_A 156 PEFLRESTAIKDYDFPPMTVIGELDKQTGDLLEEIYRELDAP--------IIRKTVEVAEMIKYTCNVWHAAKVTFANEI 227 (436)
T ss_dssp CCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTSSSC--------EEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccchhccCCCEEEEEcCCHHHHHHHHHHHhccCCC--------EEcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433333 2 5677775 88899999999988753 344778999999999999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHhhccCcchhhhhhhhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcch
Q 011501 204 YDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPT 283 (484)
Q Consensus 204 ~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~ 283 (484)
..++++.| ++++++.+++. ... .+. .....+..+..+++.+. .+|.. ..+..|+++|+++|+
T Consensus 228 ~~l~~~~G-id~~~v~~~~~---~~~--r~~--~~~~~~~pg~g~gg~~~----~kD~~------~l~~~a~~~g~~~pl 289 (436)
T 1mv8_A 228 GNIAKAVG-VDGREVMDVIC---QDH--KLN--LSRYYMRPGFAFGGSCL----PKDVR------ALTYRASQLDVEHPM 289 (436)
T ss_dssp HHHHHHTT-SCHHHHHHHHT---TCT--TTT--TSSTTCSCCSCCCSSSH----HHHHH------HHHHHHHHTTCCCTT
T ss_pred HHHHHHhC-CCHHHHHHHhc---CCC--CCC--CcccCCCCcccccCcCc----HhhHH------HHHHHHHHcCCCcHH
Confidence 99999999 99999888763 111 000 00111111112333332 23332 677899999999998
Q ss_pred HHHH
Q 011501 284 IESS 287 (484)
Q Consensus 284 ~~~a 287 (484)
+.++
T Consensus 290 ~~~v 293 (436)
T 1mv8_A 290 LGSL 293 (436)
T ss_dssp GGGH
T ss_pred HHHH
Confidence 8765
No 36
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.92 E-value=2.6e-24 Score=218.03 Aligned_cols=288 Identities=14% Similarity=0.113 Sum_probs=203.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcC---CC----CeeecCCHhHHHhhcCCCcEEEE
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEG---NL----PLYGFHDPESFVHSIQKPRVIIM 75 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~---~~----~~~~~~s~~e~~~~l~~advIi~ 75 (484)
+|||+|||+|.||.++|..|+++|++|++|+|++++++.+.+.+.+.. +. ++..+++++++++. +|+||+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~---aDvVil 105 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEG---VTDILI 105 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTT---CCEEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhc---CCEEEE
Confidence 479999999999999999999999999999999999988887643210 00 25667888888877 999999
Q ss_pred ecCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHH----HHHHHHcCCeEEeccCCCCHHhhhcCC-ccccCCCHH
Q 011501 76 LVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERR----QKAVAELGLLYLGMGVSGGEEGARYGP-SLMPGGSFE 150 (484)
Q Consensus 76 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~----~~~l~~~g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~ 150 (484)
+||+. .++++++++.++++++++||+++++....+..+ .+.+....+.++.+|.+..+....... .++.+.+++
T Consensus 106 aVp~~-~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~~~~~vlsgP~~a~ev~~g~pt~~via~~~~~ 184 (356)
T 3k96_A 106 VVPSF-AFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLASNNSQ 184 (356)
T ss_dssp CCCHH-HHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCSCCEEEEESSCCHHHHHTTCCEEEEEEESCHH
T ss_pred CCCHH-HHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCCCCEEEEECccHHHHHHcCCCeEEEEecCCHH
Confidence 99986 899999999999999999999988654443222 333332456678888776654443333 445667899
Q ss_pred HHHHHHHHHHHHhccCCCCCCceEEeCC-----------------chhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC
Q 011501 151 AYKHIEDILLKVAAQVPDSGPCVTYVGK-----------------GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKL 213 (484)
Q Consensus 151 ~~~~v~~ll~~i~~~~~~~~~~~~~~G~-----------------~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~ 213 (484)
..+.++++|+..+-++ +...+ .|.+..+|+..|...+.+...++|+..++++.| .
T Consensus 185 ~~~~v~~lf~~~~~rv-------~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~E~~~l~~a~G-~ 256 (356)
T 3k96_A 185 FSKDLIERLHGQRFRV-------YKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVSVFG-G 256 (356)
T ss_dssp HHHHHHHHHCCSSEEE-------EEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTT-C
T ss_pred HHHHHHHHhCCCCeeE-------EEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHhC-C
Confidence 9999999998655432 33222 256667789999999999999999999999999 9
Q ss_pred CHHHHHHHHHhhccCcchh--hhhhhhccccccccCCCCchhHHHhhhhcCCCCchHHHH----HHHHHcCCCcchHHHH
Q 011501 214 SNEELQQVFSEWNKGELLS--FLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTV----QQAADLSVAAPTIESS 287 (484)
Q Consensus 214 ~~~~i~~~~~~~~~g~~~s--~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~----~~A~~~gvp~p~~~~a 287 (484)
+++++.++ .|.++- ......++..+.+..+..+..++.+.+.++++.+|..++ +.|+++|+++|++. +
T Consensus 257 ~~~t~~gl-----~g~gDl~~tc~s~~sRN~~~G~~l~~g~~~~~~~~~~~~~~eG~~t~~~~~~la~~~~v~~Pi~~-~ 330 (356)
T 3k96_A 257 KQETLTGL-----AGLGDLVLTCTDNQSRNRRFGLALGEGVDKKEAQQAIGQAIEGLYNTDQVHALAQKHAIEMPLTF-Q 330 (356)
T ss_dssp CHHHHTST-----TTHHHHHHHHHCTTCHHHHHHHHHHHTCCHHHHHHHHCSCCSHHHHHHHHHHHHHHTTCCCHHHH-H
T ss_pred ChHhhccc-----chhhHHHHhccCCCCccHHHHHHHHCCCCHHHHHHHcCCccchHHHHHHHHHHHHHcCCCCcHHH-H
Confidence 99987653 222221 111111111111111122345677777788899997665 46899999999766 5
Q ss_pred HHHHHHhcCchHHHHHHHhccC
Q 011501 288 LDARFLSGLKEERVEAAKVFRS 309 (484)
Q Consensus 288 v~~r~~s~~~~~r~~~~~~~~~ 309 (484)
|++.+... ++.+..+..++..
T Consensus 331 v~~il~~~-~~~~~~~~~l~~r 351 (356)
T 3k96_A 331 VHRILHED-LDPQQAVQELLER 351 (356)
T ss_dssp HHHHHHSC-CCHHHHHHHHHSC
T ss_pred HHHHHhCC-CCHHHHHHHHHcC
Confidence 66665554 4566666666643
No 37
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.91 E-value=1.7e-22 Score=208.37 Aligned_cols=251 Identities=14% Similarity=0.057 Sum_probs=183.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhc-----------CCCCeeecCCHhHHHhhcCCCcE
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQE-----------GNLPLYGFHDPESFVHSIQKPRV 72 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~-----------~~~~~~~~~s~~e~~~~l~~adv 72 (484)
|||+|||+|.||.++|.+|++ |++|++|||++++++.+.+.+..- ...++..++++++.++. +|+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~---aDv 76 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKE---AEL 76 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHH---CSE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcC---CCE
Confidence 489999999999999999999 999999999999998876533100 00024566788777777 999
Q ss_pred EEEecCCCc----------hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhh---c
Q 011501 73 IIMLVKAGS----------PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGAR---Y 139 (484)
Q Consensus 73 Ii~~vp~~~----------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~---~ 139 (484)
||+|||++. .++++++++.+ +.++++||+.||..+.+++++.+.+.+. .++.+|....+..+. .
T Consensus 77 viiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~--~v~~~Pe~~~~G~a~~~~~ 153 (402)
T 1dlj_A 77 VIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD--RIIFSPEFLRESKALYDNL 153 (402)
T ss_dssp EEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS--CEEECCCCCCTTSTTHHHH
T ss_pred EEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC--eEEECCccccCcchhhccc
Confidence 999999984 58999999999 8999999999999999998888766543 677788776654433 2
Q ss_pred CC-ccccCCCH-------HHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Q 011501 140 GP-SLMPGGSF-------EAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVG 211 (484)
Q Consensus 140 g~-~i~~gg~~-------~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g 211 (484)
.+ .+++|++. +..+.+.++|..-..+. ..++++++.++++++|++.|.+.+..+++++|+..+|++.|
T Consensus 154 ~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~~G 229 (402)
T 1dlj_A 154 YPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKN----NVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYAESRK 229 (402)
T ss_dssp SCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCS----CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccC----CceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33 58888876 55566666665422110 11377888999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhhccCcchhhhhhhhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHH
Q 011501 212 KLSNEELQQVFSEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESS 287 (484)
Q Consensus 212 ~~~~~~i~~~~~~~~~g~~~s~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~a 287 (484)
+|++++.+++. .++ + +....+..+ ++|...-+.+|.. +.+..| .|+++|++.++
T Consensus 230 -id~~~v~~~~~---~~~---r---i~~~~~~pg----~g~gg~c~~kD~~------~l~~~a--~~~~~~l~~~~ 283 (402)
T 1dlj_A 230 -LNSHMIIQGIS---YDD---R---IGMHYNNPS----FGYGGYSLPKDTK------QLLANY--NNIPQTLIEAI 283 (402)
T ss_dssp -CCHHHHHHHHH---TST---T---TCSSSCCCC----SSCCSSHHHHHHH------HHHHHH--TTSSCSHHHHH
T ss_pred -CCHHHHHHHhc---cCC---C---CCcCCCCCC----CccCCccHHhhHH------HHHHHh--cCCChHHHHHH
Confidence 99999988873 222 1 111111111 1233334555542 344445 38999988765
No 38
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.90 E-value=8e-24 Score=203.91 Aligned_cols=177 Identities=14% Similarity=0.129 Sum_probs=143.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhH--------------HHHHHHHhhhcCCCCeeecCCHhHHHhhcC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSK--------------VDETVERAKQEGNLPLYGFHDPESFVHSIQ 68 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~--------------~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~ 68 (484)
.++|||||+|.||.+||.+|+++|++|++|||++++ .+++.+.. +...+.+++++++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~e~~~~-- 90 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEH------PHVHLAAFADVAAG-- 90 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGS------TTCEEEEHHHHHHH--
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhc------CceeccCHHHHHhc--
Confidence 479999999999999999999999999999999987 44443321 12346788888887
Q ss_pred CCcEEEEecCCCchHHHHHHHH-hhhcCCCCEEEecCC-----------CChHHHHHHHHHHHH--------cCCeEEec
Q 011501 69 KPRVIIMLVKAGSPVDQTIKTL-SVYMEKGDCIIDGGN-----------EWYENTERRQKAVAE--------LGLLYLGM 128 (484)
Q Consensus 69 ~advIi~~vp~~~~v~~vl~~l-~~~l~~g~iiId~st-----------~~~~~~~~~~~~l~~--------~g~~~i~~ 128 (484)
+|+||+|||+. .+.+++.++ .+.+ ++++|||+++ ..|.++....+.+++ +++.++++
T Consensus 91 -aDvVilavp~~-~~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~~~vv~~~~~~~a 167 (245)
T 3dtt_A 91 -AELVVNATEGA-SSIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPEAKVVKTLNTMNA 167 (245)
T ss_dssp -CSEEEECSCGG-GHHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTTSEEEECSTTSCH
T ss_pred -CCEEEEccCcH-HHHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCCCeEEEeecccCH
Confidence 99999999987 566777788 7777 8999999994 444444444455544 37889999
Q ss_pred cCCCCHHhhhcCC-ccccCC-CHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHH
Q 011501 129 GVSGGEEGARYGP-SLMPGG-SFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGD 196 (484)
Q Consensus 129 pv~gg~~~a~~g~-~i~~gg-~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~ 196 (484)
|+++++..+..|+ .++++| ++++++.++++|+.++.+. ++++|+.|+|+.+|+++|.+...+
T Consensus 168 ~v~~~~~~a~~g~~~~~v~g~d~~~~~~v~~ll~~~g~~~------~~~~G~~g~a~~~k~~~~~~~~l~ 231 (245)
T 3dtt_A 168 SLMVDPGRAAGGDHSVFVSGNDAAAKAEVATLLKSLGHQD------VIDLGDITTARGAEMLLPVWIRLW 231 (245)
T ss_dssp HHHHCGGGTGGGCCCEEEECSCHHHHHHHHHHHHHTTCCC------EEEEESGGGHHHHHTTHHHHHHHH
T ss_pred HHhcCccccCCCCeeEEEECCCHHHHHHHHHHHHHcCCCc------eeccCcHHHHHHhhhhHHHHHHHH
Confidence 9999999888888 777755 6999999999999999642 689999999999999999877555
No 39
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.88 E-value=9.2e-22 Score=202.76 Aligned_cols=252 Identities=15% Similarity=0.079 Sum_probs=182.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHH---------------hhhcCCCCeeecCCHhHHHhhc
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVER---------------AKQEGNLPLYGFHDPESFVHSI 67 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~---------------~~~~~~~~~~~~~s~~e~~~~l 67 (484)
|.+|+|||+|.||.++|..|+++||+|+++|.++++++.+++. ....+ +++.++++++.++.
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g--~l~~tt~~~~ai~~- 97 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSG--RLSFAESAEEAVAA- 97 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTT--CEEECSSHHHHHHT-
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcC--CeeEEcCHHHHHhc-
Confidence 4689999999999999999999999999999999998877531 11111 46778899888887
Q ss_pred CCCcEEEEecCCCc---------hHHHHHHHHhhhcC---CCCEEEecCCCChHHHHHHHHHHH-Hc----CCeEEeccC
Q 011501 68 QKPRVIIMLVKAGS---------PVDQTIKTLSVYME---KGDCIIDGGNEWYENTERRQKAVA-EL----GLLYLGMGV 130 (484)
Q Consensus 68 ~~advIi~~vp~~~---------~v~~vl~~l~~~l~---~g~iiId~st~~~~~~~~~~~~l~-~~----g~~~i~~pv 130 (484)
+|++|+|||++. .++++.+.+.++++ +|++||..||+.|.+++++...+. +. .+....+|-
T Consensus 98 --ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~~~~~f~v~~~PE 175 (444)
T 3vtf_A 98 --TDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEAGGVKFSVASNPE 175 (444)
T ss_dssp --SSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTTTTCCCEEEECCC
T ss_pred --CCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhCCCCCceeecCcc
Confidence 999999998752 46777788887774 689999999999999988765443 32 234444564
Q ss_pred CCCHHhh----hcCCccccCC-CHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHH
Q 011501 131 SGGEEGA----RYGPSLMPGG-SFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYD 205 (484)
Q Consensus 131 ~gg~~~a----~~g~~i~~gg-~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~ 205 (484)
.-.+-.+ ...+.++.|+ ++.+.+.++.+++.+... ++. ....+++++|++.|.+.+..+++++|...
T Consensus 176 rl~eG~a~~d~~~~~riViG~~~~~a~~~~~~ly~~~~~~-------~~~-~~~~~AE~~Kl~eN~~ravnIa~~NEla~ 247 (444)
T 3vtf_A 176 FLREGSALEDFFKPDRIVIGAGDERAASFLLDVYKAVDAP-------KLV-MKPREAELVKYASNVFLALKISFANEVGL 247 (444)
T ss_dssp CCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHTTTSCSC-------EEE-ECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCccccccccCCcEEEcCCCHHHHHHHHHHHhccCCC-------EEE-echhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3222111 2223556665 677778888888766532 244 45689999999999999999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHhhccCcchhhhhhhhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHH
Q 011501 206 VLKSVGKLSNEELQQVFSEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIE 285 (484)
Q Consensus 206 l~~~~g~~~~~~i~~~~~~~~~g~~~s~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~ 285 (484)
+|++.| +|..++.+.+.. ... +....+..+-.+++.++-... ++....|+++|++.+++.
T Consensus 248 ice~~G-iDv~eV~~a~~~--d~r-------ig~~~l~PG~G~GG~CipkD~----------~~L~~~a~~~g~~~~li~ 307 (444)
T 3vtf_A 248 LAKRLG-VDTYRVFEAVGL--DKR-------IGRHYFGAGLGFGGSCFPKDT----------LAFIRFGESLGLEMAISK 307 (444)
T ss_dssp HHHHTT-CCHHHHHHHHHT--STT-------SCSTTCCCSSCCCTTTHHHHH----------HHHHHHHHHTTCCCHHHH
T ss_pred HHHHcC-CCHHHHHHHhcc--CCC-------CCCCCCCCCCCCCCcccCcCH----------HHHHHHHHhcCCCHHHHH
Confidence 999999 999999888731 011 111223333345666554332 145677899999999887
Q ss_pred HH
Q 011501 286 SS 287 (484)
Q Consensus 286 ~a 287 (484)
++
T Consensus 308 a~ 309 (444)
T 3vtf_A 308 AV 309 (444)
T ss_dssp HH
T ss_pred hh
Confidence 65
No 40
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.87 E-value=4.1e-22 Score=198.14 Aligned_cols=267 Identities=17% Similarity=0.166 Sum_probs=175.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCC------CeeecCCHhHHHhhcCCCcEEE
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNL------PLYGFHDPESFVHSIQKPRVII 74 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~------~~~~~~s~~e~~~~l~~advIi 74 (484)
|+||||+|||+|.||..+|..|+++|++|++|||++++.+.+.+.+...... ++.. .+.+++.+.++.+|+||
T Consensus 1 ~~~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~vi 79 (316)
T 2ew2_A 1 SNAMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPI-FSPEEIDHQNEQVDLII 79 (316)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCE-ECGGGCCTTSCCCSEEE
T ss_pred CCCCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEeccee-ecchhhcccCCCCCEEE
Confidence 4567999999999999999999999999999999999988887653210000 0111 13445544333599999
Q ss_pred EecCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHc----CCeEEeccCCCCH--HhhhcCC-ccc--c
Q 011501 75 MLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAEL----GLLYLGMGVSGGE--EGARYGP-SLM--P 145 (484)
Q Consensus 75 ~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~----g~~~i~~pv~gg~--~~a~~g~-~i~--~ 145 (484)
+|||+. .+.++++++.+.+.++++||++++... ..+.+.+.+.+. |..++++++++.. .....|. .++ .
T Consensus 80 ~~v~~~-~~~~v~~~l~~~l~~~~~iv~~~~g~~-~~~~l~~~~~~~~vi~g~~~~~~~~~~p~~~~~~~~g~~~i~~~~ 157 (316)
T 2ew2_A 80 ALTKAQ-QLDAMFKAIQPMITEKTYVLCLLNGLG-HEDVLEKYVPKENILVGITMWTAGLEGPGRVKLLGDGEIELENID 157 (316)
T ss_dssp ECSCHH-HHHHHHHHHGGGCCTTCEEEECCSSSC-THHHHTTTSCGGGEEEEEECCCCEEEETTEEEECSCCCEEEEESS
T ss_pred EEeccc-cHHHHHHHHHHhcCCCCEEEEecCCCC-cHHHHHHHcCCccEEEEEeeeeeEEcCCCEEEEecCCcEEEeecC
Confidence 999986 789999999999999999999988653 334444444433 2233344444321 1223454 443 4
Q ss_pred CCCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHH---------------------HHHHHhHHHHHH
Q 011501 146 GGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGI---------------------EYGDMQLIAEAY 204 (484)
Q Consensus 146 gg~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i---------------------~~~~~~~~~Ea~ 204 (484)
+++++..+.++++|+.++.+ +.+.++.+.+.+.|++.|.+ .....+++.|+.
T Consensus 158 ~~~~~~~~~~~~ll~~~g~~-------~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~E~~ 230 (316)
T 2ew2_A 158 PSGKKFALEVVDVFQKAGLN-------PSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISEFA 230 (316)
T ss_dssp GGGHHHHHHHHHHHHHTTCC-------EEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHhCCCC-------cEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHHHHH
Confidence 56888999999999999854 47777889999999999964 245678899999
Q ss_pred HHHHHhCCCCH--HHHHHHHHhhccCc--chhhhhhhhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCC
Q 011501 205 DVLKSVGKLSN--EELQQVFSEWNKGE--LLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVA 280 (484)
Q Consensus 205 ~l~~~~g~~~~--~~i~~~~~~~~~g~--~~s~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp 280 (484)
.++++.| +++ +.+.+.+..+.... ..++ .++..+++ ..++..+ +.+++ | +.++.|+++|+|
T Consensus 231 ~la~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~-~sm~~d~~------~~g~~~E-~~~~~-----~-~~~~~a~~~gv~ 295 (316)
T 2ew2_A 231 AVAEKEA-IYLDQAEVYTHIVQTYDPNGIGLHY-PSMYQDLI------KNHRLTE-IDYIN-----G-AVWRKGQKYNVA 295 (316)
T ss_dssp HHHHHTT-CCCCHHHHHHHHHHTTCTTTTTTSC-CHHHHHHT------TTCCCCS-GGGTH-----H-HHHHHHHHHTCC
T ss_pred HHHHHcC-CCCChHHHHHHHHHHhccccCCCCC-cHHHHHHH------HcCCcch-HHHHh-----h-HHHHHHHHhCCC
Confidence 9999998 886 45666664322111 1110 01111120 1111122 23333 3 688999999999
Q ss_pred cchHHHHHHHHHH
Q 011501 281 APTIESSLDARFL 293 (484)
Q Consensus 281 ~p~~~~av~~r~~ 293 (484)
+|+... +++.+.
T Consensus 296 ~P~~~~-~~~~~~ 307 (316)
T 2ew2_A 296 TPFCAM-LTQLVH 307 (316)
T ss_dssp CHHHHH-HHHHHH
T ss_pred CCHHHH-HHHHHH
Confidence 998764 455443
No 41
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.85 E-value=4e-22 Score=203.11 Aligned_cols=277 Identities=13% Similarity=0.074 Sum_probs=178.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcC---C----CCeeecCCHhHHHhhcCCCcEEEEe
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEG---N----LPLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~---~----~~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
+||+|||+|.||.+||.+|+++|++|++|||++++++.+.+.+.... + .++..+.+++++++. +|+||+|
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---aDvVila 92 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNG---AEIILFV 92 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTT---CSSEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcC---CCEEEEC
Confidence 38999999999999999999999999999999999888876531100 0 025566788887776 9999999
Q ss_pred cCCCchHHHHHHH----HhhhcCC-CCEEEecCCC-ChHHHHHHHHHHHHc-C---CeEEeccCCCCHHhhhcCC---cc
Q 011501 77 VKAGSPVDQTIKT----LSVYMEK-GDCIIDGGNE-WYENTERRQKAVAEL-G---LLYLGMGVSGGEEGARYGP---SL 143 (484)
Q Consensus 77 vp~~~~v~~vl~~----l~~~l~~-g~iiId~st~-~~~~~~~~~~~l~~~-g---~~~i~~pv~gg~~~a~~g~---~i 143 (484)
||+ .++++++.+ +.+.+.+ +++||+++++ .+...+.+.+.+.+. + ..++.+|....+. ..|. .+
T Consensus 93 v~~-~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~gp~~~~~~--~~g~~~~~~ 169 (366)
T 1evy_A 93 IPT-QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEV--ATGVFTCVS 169 (366)
T ss_dssp CCH-HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEESSCCHHHH--HTTCCEEEE
T ss_pred CCh-HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeCCChHHHH--HhCCceEEE
Confidence 997 588999988 9888888 9999999854 443333344444433 3 2334444332211 2333 34
Q ss_pred ccCCCHHHHHHHHHHHHHH--hccCCCCCCceEEeCCch---h--------------HHHHHHHHHHHHHHHHhHHHHHH
Q 011501 144 MPGGSFEAYKHIEDILLKV--AAQVPDSGPCVTYVGKGG---S--------------GNFVKMIHNGIEYGDMQLIAEAY 204 (484)
Q Consensus 144 ~~gg~~~~~~~v~~ll~~i--~~~~~~~~~~~~~~G~~g---~--------------g~~~K~v~N~i~~~~~~~~~Ea~ 204 (484)
+.+++++.++.++++|+.. +.+ +++.++.- - ...+|+.+|.+.....+++.|+.
T Consensus 170 ~~~~~~~~~~~v~~ll~~~g~g~~-------~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~~~~n~~~~~~~~~~~E~~ 242 (366)
T 1evy_A 170 IASADINVARRLQRIMSTGDRSFV-------CWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIR 242 (366)
T ss_dssp EECSSHHHHHHHHHHHSCTTSSEE-------EEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred EecCCHHHHHHHHHHhcCCCCeEE-------EEEcCCchHHHHHHHHHhHHHHHHHHHhhccCCccHHHHHHHHHHHHHH
Confidence 4567888999999999988 543 34555421 1 22234557888888899999999
Q ss_pred HHHHHhCCCCHHHHHHHH---HhhccCcchhhhhhhh--ccccccccCCCCchhHHHh----------hhhcCCCCchHH
Q 011501 205 DVLKSVGKLSNEELQQVF---SEWNKGELLSFLIEIT--ADIFGIKDDKGDGYLVDKV----------LDKTGMKGTGKW 269 (484)
Q Consensus 205 ~l~~~~g~~~~~~i~~~~---~~~~~g~~~s~l~~~~--~~~l~~~~~~~~~~~l~~i----------~~~~~~k~tg~~ 269 (484)
.++++.| ++++.+.++. ..|.. ..+...+.+ ...+.. ++.++.+ .+++ | .
T Consensus 243 ~la~a~G-i~~~~~~~~~~~~~~~~~--~~s~~~~~~~~~~~~~~------g~~~~~~~~~~~~~~e~~~~~-----~-~ 307 (366)
T 1evy_A 243 DLTAALG-GDGSAVFGLAGLGDLQLT--CSSELSRNFTVGKKLGK------GLPIEEIQRTSKAVAEGVATA-----D-P 307 (366)
T ss_dssp HHHHHTT-CCCTTTTSTTTHHHHHHH--HTCTTSHHHHHHHHHHT------TCCHHHHHC---CCCHHHHHH-----H-H
T ss_pred HHHHHhC-CCCccccccccchhheee--ecCCCCchHHHHHHHhC------CCCHHHHHHHcCCeeehHHHH-----H-H
Confidence 9999999 9976553320 00000 001111111 011111 1112222 2333 2 6
Q ss_pred HHHHHHHcCCCcchHHHHHHHHHHhcCchHHHHHHHhccCC
Q 011501 270 TVQQAADLSVAAPTIESSLDARFLSGLKEERVEAAKVFRSS 310 (484)
Q Consensus 270 ~~~~A~~~gvp~p~~~~av~~r~~s~~~~~r~~~~~~~~~~ 310 (484)
+++.|+++|+|+|+... +++.+ ...++.+..+..++..|
T Consensus 308 v~~~a~~~gv~~P~~~~-v~~~~-~~~~~~~~~~~~l~~~~ 346 (366)
T 1evy_A 308 LMRLAKQLKVKMPLCHQ-IYEIV-YKKKNPRDALADLLSCG 346 (366)
T ss_dssp HHHHHHHHTCCCHHHHH-HHHHH-HSCCCHHHHHHHHGGGC
T ss_pred HHHHHHHhCCCCcHHHH-HHHHH-HCCCCHHHHHHHHHcCC
Confidence 78999999999998764 45544 44566677777666543
No 42
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.85 E-value=1.9e-20 Score=186.73 Aligned_cols=193 Identities=17% Similarity=0.212 Sum_probs=145.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhh-------hcC---C-C-------CeeecCCHhHHH
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK-------QEG---N-L-------PLYGFHDPESFV 64 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~-------~~~---~-~-------~~~~~~s~~e~~ 64 (484)
+++|+|||+|.||.+||.+|+++||+|++||+++++++.+.+... ..| + . +++.++++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav 85 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHH
Confidence 468999999999999999999999999999999998877754210 000 0 0 256788998888
Q ss_pred hhcCCCcEEEEecCCCchH-HHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHH----cCCeEEeccCCCCHHhhhc
Q 011501 65 HSIQKPRVIIMLVKAGSPV-DQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAE----LGLLYLGMGVSGGEEGARY 139 (484)
Q Consensus 65 ~~l~~advIi~~vp~~~~v-~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~----~g~~~i~~pv~gg~~~a~~ 139 (484)
+. +|+||+|||.+..+ +.++.++.+.++++.+|++.+++.+.. ++.+.+.. .|.||++.|- .
T Consensus 86 ~~---aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~--~la~~~~~~~r~ig~Hp~~P~~--------~ 152 (319)
T 2dpo_A 86 EG---VVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPS--KLFTGLAHVKQCIVAHPVNPPY--------Y 152 (319)
T ss_dssp TT---EEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHH--HHHTTCTTGGGEEEEEECSSTT--------T
T ss_pred hc---CCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHH--HHHHhcCCCCCeEEeecCCchh--------h
Confidence 77 99999999987555 466688999999999998776654432 33333321 2556665431 1
Q ss_pred CC--ccccC--CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCH
Q 011501 140 GP--SLMPG--GSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSN 215 (484)
Q Consensus 140 g~--~i~~g--g~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~ 215 (484)
++ .+++| +++++++.++++++.+|++ ++++++.+.|+ +++|.+. ++++|++.++++.+ +++
T Consensus 153 ~~lveiv~g~~t~~e~~~~~~~l~~~lGk~-------~v~v~~~~~Gf---i~Nrll~----a~~~EA~~l~~~g~-~~~ 217 (319)
T 2dpo_A 153 IPLVELVPHPETSPATVDRTHALMRKIGQS-------PVRVLKEIDGF---VLNRLQY----AIISEAWRLVEEGI-VSP 217 (319)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCE-------EEECSSCCTTT---THHHHHH----HHHHHHHHHHHTTS-SCH
T ss_pred cceEEEeCCCCCCHHHHHHHHHHHHHcCCE-------EEEECCCcCCc---hHHHHHH----HHHHHHHHHHHhCC-CCH
Confidence 23 46666 7999999999999999976 48898778886 3444432 46899999999887 999
Q ss_pred HHHHHHHH
Q 011501 216 EELQQVFS 223 (484)
Q Consensus 216 ~~i~~~~~ 223 (484)
+++.+++.
T Consensus 218 ~~id~a~~ 225 (319)
T 2dpo_A 218 SDLDLVMS 225 (319)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999973
No 43
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.84 E-value=1e-20 Score=185.99 Aligned_cols=186 Identities=12% Similarity=0.188 Sum_probs=139.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||.+||.+|+ +|++|++||+++++++++.+......--+++.++++++ ++. +|+||.|+|++.++
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~---aDlVieavpe~~~v 87 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKD---CDIVMEAVFEDLNT 87 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGG---CSEEEECCCSCHHH
T ss_pred CeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcC---CCEEEEcCcCCHHH
Confidence 68999999999999999999 99999999999999988876510000002567788877 565 99999999999888
Q ss_pred HHHH-HHHhhhcCCCCEEE-ecCCCChHHHHHHHH-HHHHcCCeEEeccCCCCHHhhhcCC--ccccC--CCHHHHHHHH
Q 011501 84 DQTI-KTLSVYMEKGDCII-DGGNEWYENTERRQK-AVAELGLLYLGMGVSGGEEGARYGP--SLMPG--GSFEAYKHIE 156 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiI-d~st~~~~~~~~~~~-~l~~~g~~~i~~pv~gg~~~a~~g~--~i~~g--g~~~~~~~v~ 156 (484)
+.++ .++.+. ++.+++ |+||.++....+..+ ..+..|.||++ |+.+ ++ .++.| ++++++++++
T Consensus 88 k~~l~~~l~~~--~~~IlasntSti~~~~~a~~~~~~~r~~G~Hf~~-Pv~~-------~~lveiv~g~~t~~~~~~~~~ 157 (293)
T 1zej_A 88 KVEVLREVERL--TNAPLCSNTSVISVDDIAERLDSPSRFLGVHWMN-PPHV-------MPLVEIVISRFTDSKTVAFVE 157 (293)
T ss_dssp HHHHHHHHHTT--CCSCEEECCSSSCHHHHHTTSSCGGGEEEEEECS-STTT-------CCEEEEEECTTCCHHHHHHHH
T ss_pred HHHHHHHHhcC--CCCEEEEECCCcCHHHHHHHhhcccceEeEEecC-cccc-------CCEEEEECCCCCCHHHHHHHH
Confidence 8766 555554 888885 677877654333211 11234788888 5543 34 45666 4999999999
Q ss_pred HHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011501 157 DILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFS 223 (484)
Q Consensus 157 ~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~ 223 (484)
++++.+|++ ++++|+. |+++|.+. ..++|++.++++ | ++++++.+++.
T Consensus 158 ~l~~~lGk~-------~v~v~d~------fi~Nrll~----~~~~EA~~l~~~-G-v~~e~id~~~~ 205 (293)
T 1zej_A 158 GFLRELGKE-------VVVCKGQ------SLVNRFNA----AVLSEASRMIEE-G-VRAEDVDRVWK 205 (293)
T ss_dssp HHHHHTTCE-------EEEEESS------CHHHHHHH----HHHHHHHHHHHH-T-CCHHHHHHHHH
T ss_pred HHHHHcCCe-------EEEeccc------ccHHHHHH----HHHHHHHHHHHh-C-CCHHHHHHHHH
Confidence 999999976 4888864 66666543 568999999998 7 89999999873
No 44
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.84 E-value=1.6e-21 Score=196.34 Aligned_cols=273 Identities=14% Similarity=0.090 Sum_probs=172.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhc---C-CCCeeecCCHhHHHhhcCCCcEEEEecC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQE---G-NLPLYGFHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~---~-~~~~~~~~s~~e~~~~l~~advIi~~vp 78 (484)
.|||+|||+|.||..||.+|+++|++|++|||++++++.+.+.+... + .+++..++++++ ++. +|+||+|||
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~---aDvVil~vk 89 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKK---EDILVIAIP 89 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCT---TEEEEECSC
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcC---CCEEEEECC
Confidence 47999999999999999999999999999999999998887764210 0 001456678877 665 999999999
Q ss_pred CCchHHHHHHHHhhhcCCCCEEEecCCC-ChHHHHHHHHHHHHc-C--CeEEeccCCCCHHhhhcCC--ccccCCCHHHH
Q 011501 79 AGSPVDQTIKTLSVYMEKGDCIIDGGNE-WYENTERRQKAVAEL-G--LLYLGMGVSGGEEGARYGP--SLMPGGSFEAY 152 (484)
Q Consensus 79 ~~~~v~~vl~~l~~~l~~g~iiId~st~-~~~~~~~~~~~l~~~-g--~~~i~~pv~gg~~~a~~g~--~i~~gg~~~~~ 152 (484)
+ .++++++.++.+ ++++||+++++ .+.+.+.+.+.+.+. + ..+..+|....+ ...|. .+..|++. +
T Consensus 90 ~-~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~~~~~~~~~P~~~~~--~~~g~~~~~~~g~~~--~ 161 (335)
T 1z82_A 90 V-QYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILGCPYAVLSGPSHAEE--VAKKLPTAVTLAGEN--S 161 (335)
T ss_dssp G-GGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTCCCEEEEESSCCHHH--HHTTCCEEEEEEETT--H
T ss_pred H-HHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcCCceEEEECCccHHH--HhCCCceEEEEEehh--H
Confidence 7 589998877665 78999999965 443334455555443 2 223334432211 12343 33444433 7
Q ss_pred HHHHHHHHHHhccCCCCCCceEEeCCc-----------------hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCH
Q 011501 153 KHIEDILLKVAAQVPDSGPCVTYVGKG-----------------GSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSN 215 (484)
Q Consensus 153 ~~v~~ll~~i~~~~~~~~~~~~~~G~~-----------------g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~ 215 (484)
+.++++|+..+.+ +++.++. |.+..+|+.+|.+......++.|+..++++.| +++
T Consensus 162 ~~~~~ll~~~g~~-------~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~a~G-~~~ 233 (335)
T 1z82_A 162 KELQKRISTEYFR-------VYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFG-ADQ 233 (335)
T ss_dssp HHHHHHHCCSSEE-------EEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTT-CCH
T ss_pred HHHHHHhCCCCEE-------EEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHhC-CCh
Confidence 8888999876654 2444332 23344566688888888999999999999999 999
Q ss_pred HHHHHHHHhhccCcch------hhhhhhh--ccccccccCCCCchhHHHhhhhcCCC-----CchHHHHHHHHHcCCCcc
Q 011501 216 EELQQVFSEWNKGELL------SFLIEIT--ADIFGIKDDKGDGYLVDKVLDKTGMK-----GTGKWTVQQAADLSVAAP 282 (484)
Q Consensus 216 ~~i~~~~~~~~~g~~~------s~l~~~~--~~~l~~~~~~~~~~~l~~i~~~~~~k-----~tg~~~~~~A~~~gvp~p 282 (484)
+.+.++. +..+ ++..+.+ ...+..+ +..+.+.+..+++ ..| .+++.|+++|+|+|
T Consensus 234 ~~~~~l~-----~~~~~~~t~~s~~~~n~~~~~~~~~g------~~~~~~~~~~g~~~e~~~~~~-~v~~~a~~~gv~~P 301 (335)
T 1z82_A 234 KTFMGLA-----GIGDLMVTCNSRYSRNRRFGELIARG------FNPLKLLESSNQVVEGAFTVK-AVMKIAKENKIDMP 301 (335)
T ss_dssp HHHTSTT-----THHHHHHHHHCTTCHHHHHHHHHHHT------CCHHHHHHTCSSCCTHHHHHH-HHHHHHHHTTCCCH
T ss_pred hhhcccc-----cccceeeeccCccCcHHHHHHHHhCC------CCHHHHHHhcCCeeeHHHHHH-HHHHHHHHhCCCCc
Confidence 8765421 1111 1111111 0111111 1223232222221 122 67789999999999
Q ss_pred hHHHHHHHHHHhcCchHHHHHHHhccC
Q 011501 283 TIESSLDARFLSGLKEERVEAAKVFRS 309 (484)
Q Consensus 283 ~~~~av~~r~~s~~~~~r~~~~~~~~~ 309 (484)
+... +++. +..-++.+..+..++..
T Consensus 302 ~~~~-v~~~-~~~~~~~~~~~~~l~~~ 326 (335)
T 1z82_A 302 ISEE-VYRV-VYEGKPPLQSMRDLMRR 326 (335)
T ss_dssp HHHH-HHHH-HHSCCCHHHHHHHHHC-
T ss_pred HHHH-HHHH-HhCCCCHHHHHHHHHcC
Confidence 8764 4444 44556666776666543
No 45
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.82 E-value=4.6e-20 Score=181.55 Aligned_cols=200 Identities=11% Similarity=0.107 Sum_probs=159.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 3 QTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 3 ~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
||+|+|||+ |.||..+|.+|+++|++|++|||++++.+.+.+.+ +.. .++.++++. +|+||+|||+.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g-------~~~-~~~~~~~~~---aDvVi~av~~~- 78 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMG-------IPL-TDGDGWIDE---ADVVVLALPDN- 78 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTT-------CCC-CCSSGGGGT---CSEEEECSCHH-
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcC-------CCc-CCHHHHhcC---CCEEEEcCCch-
Confidence 469999999 99999999999999999999999999888876532 333 366666666 99999999987
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEE-eccCCCCH------HhhhcC-------C-c--cc
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYL-GMGVSGGE------EGARYG-------P-S--LM 144 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i-~~pv~gg~------~~a~~g-------~-~--i~ 144 (484)
.+.++++++.+.+.++.+|||+|+..+... +.+ + ..+..|+ .+|++|++ .....| . . +.
T Consensus 79 ~~~~v~~~l~~~l~~~~ivv~~s~~~~~~~--l~~-~-~~~~~~v~~~P~~~~~~~~~~~~~~~~g~l~~~~~~~~i~~~ 154 (286)
T 3c24_A 79 IIEKVAEDIVPRVRPGTIVLILDAAAPYAG--VMP-E-RADITYFIGHPCHPPLFNDETDPAARTDYHGGIAKQAIVCAL 154 (286)
T ss_dssp HHHHHHHHHGGGSCTTCEEEESCSHHHHHT--CSC-C-CTTSEEEEEEECCSCSSCCCCSHHHHTCSSSSSSCEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCCchhHH--HHh-h-hCCCeEEecCCCCccccccccchhhccCcccccccceeeeec
Confidence 589999999999999999999888764322 222 2 2367888 78999887 556667 2 2 33
Q ss_pred cCCCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-CCCCHHHHHHHHH
Q 011501 145 PGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSV-GKLSNEELQQVFS 223 (484)
Q Consensus 145 ~gg~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~-g~~~~~~i~~~~~ 223 (484)
.+++++.++.++++|+.+|... ..++++++.+.+.+.|.+.|+.....+..++|++..+... | ++++++.+++.
T Consensus 155 ~~~~~~~~~~v~~l~~~~G~~~----~~~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~G-l~~~~~~~~~~ 229 (286)
T 3c24_A 155 MQGPEEHYAIGADICETMWSPV----TRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYG-IDRQAALDFMI 229 (286)
T ss_dssp EESCTHHHHHHHHHHHHHTCSE----EEEEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhcCCc----ceEEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH
Confidence 5689999999999999999610 0258898877777779999999889999999988776655 7 99999988874
No 46
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.82 E-value=2.3e-20 Score=190.79 Aligned_cols=284 Identities=9% Similarity=0.060 Sum_probs=179.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCC-------CcEEEEeCChh-----HHHHHHHHhhhcC---C----CCeeecCCHhHH
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKG-------FPISVYNRTTS-----KVDETVERAKQEG---N----LPLYGFHDPESF 63 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G-------~~V~v~dr~~~-----~~~~~~~~~~~~~---~----~~~~~~~s~~e~ 63 (484)
||||+|||+|.||.+||.+|+++| ++|++|||+++ +.+.+.+.+.... + .++..+++++++
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea 100 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASV 100 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHH
Confidence 468999999999999999999999 99999999998 8877765431100 0 035667788887
Q ss_pred HhhcCCCcEEEEecCCCchHHHHHHHHhh----hcCCCCEEEecCCCChH---HHHHHHHHHHHc-C--CeEEeccCCCC
Q 011501 64 VHSIQKPRVIIMLVKAGSPVDQTIKTLSV----YMEKGDCIIDGGNEWYE---NTERRQKAVAEL-G--LLYLGMGVSGG 133 (484)
Q Consensus 64 ~~~l~~advIi~~vp~~~~v~~vl~~l~~----~l~~g~iiId~st~~~~---~~~~~~~~l~~~-g--~~~i~~pv~gg 133 (484)
++. +|+||+|||+ ..++++++++.+ .+.++++||+++++... ..+.+.+.+.+. + ..++.+|....
T Consensus 101 ~~~---aDvVilav~~-~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~~~~~v~~gp~~a~ 176 (375)
T 1yj8_A 101 IND---ADLLIFIVPC-QYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLNIPCSALSGANIAM 176 (375)
T ss_dssp HTT---CSEEEECCCH-HHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSSSCEEEEECSCCHH
T ss_pred HcC---CCEEEEcCCH-HHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcCCCEEEEeCCchHH
Confidence 776 9999999997 489999999998 89899999999876432 122333333332 2 22333343221
Q ss_pred HHhhhcCC---ccccCCCHHHHHHHHHHHHHHhccCCCCCCceEEeCCch-----------------hHHHHHHHHHHHH
Q 011501 134 EEGARYGP---SLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGG-----------------SGNFVKMIHNGIE 193 (484)
Q Consensus 134 ~~~a~~g~---~i~~gg~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g-----------------~g~~~K~v~N~i~ 193 (484)
+ ...|. .++.+++++..+.++++|+..+.+ +++.++.- ....+|+.+|...
T Consensus 177 ~--v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~-------~~~~~di~~~~~~k~l~N~~~~~~g~~~~~~~~~n~~~ 247 (375)
T 1yj8_A 177 D--VAMENFSEATIGGNDKDSLVIWQRVFDLPYFK-------INCVNETIEVEICGALKNIITLACGFCDGLNLPTNSKS 247 (375)
T ss_dssp H--HHTTCCEEEEEECSCHHHHHHHHHHHCBTTEE-------EEEESCSHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred H--HHhCCCeEEEEecCCHHHHHHHHHHhCCCCeE-------EEEeCCcHHHHHHHHHHHHHHHHHHHHhhccCChhHHH
Confidence 1 12232 345567888999999999877754 35555532 2222355578888
Q ss_pred HHHHhHHHHHHHHHHHhC-CCCHHHHHH------HHHhhccCcchhhhhhhhcccccc-ccCCCCchhHHHhhhhc--CC
Q 011501 194 YGDMQLIAEAYDVLKSVG-KLSNEELQQ------VFSEWNKGELLSFLIEITADIFGI-KDDKGDGYLVDKVLDKT--GM 263 (484)
Q Consensus 194 ~~~~~~~~Ea~~l~~~~g-~~~~~~i~~------~~~~~~~g~~~s~l~~~~~~~l~~-~~~~~~~~~l~~i~~~~--~~ 263 (484)
....+++.|+..++++.| |++++++.+ ++..-. + ..++.+ ...+.. ++.+ .++.+.+++ ++
T Consensus 248 a~~~~~~~E~~~la~a~G~G~~~~~~~~~~g~~dl~~t~~-~-~~~~~~---~~~~~~~g~~~----~~~d~~~~~~~g~ 318 (375)
T 1yj8_A 248 AIIRNGINEMILFGKVFFQKFNENILLESCGFADIITSFL-A-GRNAKC---SAEFIKSTPKK----TWEELENEILKGQ 318 (375)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCCGGGGGSTTTHHHHHHHHS-S-SSHHHH---HHHHHHHTTSS----CHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhccCCCcchhhccccccceeEeee-C-CccHHH---HHHHHhcCCCC----CHHHHHHhhcCCc
Confidence 889999999999999995 598876533 221100 0 011111 111111 0001 122222211 22
Q ss_pred CCchH----HHHHHHHHcCC--CcchHHHHHHHHHHhcCchHHHHHHHhccCC
Q 011501 264 KGTGK----WTVQQAADLSV--AAPTIESSLDARFLSGLKEERVEAAKVFRSS 310 (484)
Q Consensus 264 k~tg~----~~~~~A~~~gv--p~p~~~~av~~r~~s~~~~~r~~~~~~~~~~ 310 (484)
+-++. .+++.|+++|+ |+|+... ++ +.+...++.++.+..++..|
T Consensus 319 ~~E~~~~~~~v~~~a~~~gv~~~~P~~~~-v~-~~~~~~~~~~~~~~~l~~~~ 369 (375)
T 1yj8_A 319 KLQGTVTLKYVYHMIKEKNMTNEFPLFTV-LH-KISFENEDPSSLLKTFMNNK 369 (375)
T ss_dssp CCHHHHHHHHHHHHHHHTTCGGGCHHHHH-HH-HHHHSCCCTTHHHHHHSSCC
T ss_pred EeeHHHHHHHHHHHHHHhCCCCCCCHHHH-HH-HHHhCCCCHHHHHHHHHcCc
Confidence 22221 46788999999 9998764 44 44555666777777776544
No 47
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.82 E-value=2.7e-19 Score=173.33 Aligned_cols=226 Identities=13% Similarity=0.097 Sum_probs=158.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+|+|+|||+|.||..++.+|.+.|++|.+|||++++.+.+.+.. ++..+.+++++++. +|+||+|+|+ ..
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~------g~~~~~~~~~~~~~---~D~Vi~~v~~-~~ 72 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL------ALPYAMSHQDLIDQ---VDLVILGIKP-QL 72 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH------TCCBCSSHHHHHHT---CSEEEECSCG-GG
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc------CCEeeCCHHHHHhc---CCEEEEEeCc-Hh
Confidence 46999999999999999999999999999999999988877543 24567789888876 9999999995 46
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCC-ccccCC--CHHHHHHHHHHH
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGP-SLMPGG--SFEAYKHIEDIL 159 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~-~i~~gg--~~~~~~~v~~ll 159 (484)
+.+++.+ +.+|++||+.+++.... .+.+.+ ..+..++. ++.+.+.....|. .+++|+ +++.++.++++|
T Consensus 73 ~~~v~~~----l~~~~~vv~~~~~~~~~--~l~~~~-~~~~~~v~-~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ll 144 (259)
T 2ahr_A 73 FETVLKP----LHFKQPIISMAAGISLQ--RLATFV-GQDLPLLR-IMPNMNAQILQSSTALTGNALVSQELQARVRDLT 144 (259)
T ss_dssp HHHHHTT----SCCCSCEEECCTTCCHH--HHHHHH-CTTSCEEE-EECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHHHH----hccCCEEEEeCCCCCHH--HHHHhc-CCCCCEEE-EcCCchHHHcCceEEEEcCCCCCHHHHHHHHHHH
Confidence 7776654 34788999986544332 233333 24556776 5666666666777 566776 899999999999
Q ss_pred HHHhccCCCCCCceEEeCCchhHHHHHHHH--HHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhh-hhh
Q 011501 160 LKVAAQVPDSGPCVTYVGKGGSGNFVKMIH--NGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSF-LIE 236 (484)
Q Consensus 160 ~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~--N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s~-l~~ 236 (484)
+.+| + ++++++.....++++.. |.+.+..+..++|+ +.+.| ++++++.+++. .+...++ ++.
T Consensus 145 ~~~G-~-------~~~~~~~~~d~~~al~g~~~~~~~~~~~~la~~---~~~~G-l~~~~~~~~~~---~~~~~~~~~~~ 209 (259)
T 2ahr_A 145 DSFG-S-------TFDISEKDFDTFTALAGSSPAYIYLFIEALAKA---GVKNG-IPKAKALEIVT---QTVLASASNLK 209 (259)
T ss_dssp HTTE-E-------EEECCGGGHHHHHHHHTTHHHHHHHHHHHHHHH---HHHTT-CCHHHHHHHHH---HHHHHHHHHHH
T ss_pred HhCC-C-------EEEecHHHccHHHHHhccHHHHHHHHHHHHHHH---HHHcC-CCHHHHHHHHH---HHHHHHHHHHH
Confidence 9998 4 48888766666666642 44555556666666 56788 99999988874 3333444 332
Q ss_pred hhc--cccccccCCCCchhHHHhhhhc
Q 011501 237 ITA--DIFGIKDDKGDGYLVDKVLDKT 261 (484)
Q Consensus 237 ~~~--~~l~~~~~~~~~~~l~~i~~~~ 261 (484)
... +...+++.++|++.+...++++
T Consensus 210 ~~~~~p~~l~~~~~~p~~~~~~~~~~l 236 (259)
T 2ahr_A 210 TSSQSPHDFIDAICSPGGTTIAGLMEL 236 (259)
T ss_dssp HSSSCHHHHHHHHCCTTSHHHHHHHHH
T ss_pred hcCCCHHHHHHhCCCCChhHHHHHHHH
Confidence 221 2222223346677777666654
No 48
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.82 E-value=3.8e-20 Score=180.09 Aligned_cols=198 Identities=18% Similarity=0.163 Sum_probs=151.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCc-EEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFP-ISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~-V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
.|+|+|||+|.||..++..|+++|++ |.+|||++++.+.+.+.. ++..+.+++++++. +|+||+|+|+.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~------g~~~~~~~~~~~~~---~Dvvi~av~~~- 79 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKV------EAEYTTDLAEVNPY---AKLYIVSLKDS- 79 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT------TCEEESCGGGSCSC---CSEEEECCCHH-
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc------CCceeCCHHHHhcC---CCEEEEecCHH-
Confidence 36899999999999999999999999 999999999988877642 25667788887765 99999999997
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCCccc-cCCCHHHHHHHHHHHH
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLM-PGGSFEAYKHIEDILL 160 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~~i~-~gg~~~~~~~v~~ll~ 160 (484)
.+.++++++.+.++++++||+++++.+.+. +.+.+...+..+..+|++|++.....+..++ .+++++.++.++++|+
T Consensus 80 ~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~--l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 157 (266)
T 3d1l_A 80 AFAELLQGIVEGKREEALMVHTAGSIPMNV--WEGHVPHYGVFYPMQTFSKQREVDFKEIPFFIEASSTEDAAFLKAIAS 157 (266)
T ss_dssp HHHHHHHHHHTTCCTTCEEEECCTTSCGGG--STTTCSSEEEEEECCCC---CCCCCTTCCEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCcEEEECCCCCchHH--HHHHHHhccCcCCceecCCCchhhcCCCeEEEecCCHHHHHHHHHHHH
Confidence 678899999888889999999999887544 3333333355667778877544322333444 4889999999999999
Q ss_pred HHhccCCCCCCceEEeCCch---hHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHh
Q 011501 161 KVAAQVPDSGPCVTYVGKGG---SGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSE 224 (484)
Q Consensus 161 ~i~~~~~~~~~~~~~~G~~g---~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~ 224 (484)
.+|.+ ++++++.+ -...+|+++|.. ..+..++|+ ++++.| ++++++.+++..
T Consensus 158 ~~g~~-------~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~ea--l~~~~G-l~~~~~~~l~~~ 212 (266)
T 3d1l_A 158 TLSNR-------VYDADSEQRKSLHLAAVFTCNFT--NHMYALAAE--LLKKYN-LPFDVMLPLIDE 212 (266)
T ss_dssp TTCSC-------EEECCHHHHHHHHHHHHHHHHHH--HHHHHHHHH--HHHHTT-CCGGGGHHHHHH
T ss_pred hcCCc-------EEEeCHHHHHHHHHHHHHHHHHH--HHHHHHHHH--HHHHcC-CCHHHHHHHHHH
Confidence 99865 48888654 456789999984 345566676 567888 999988888743
No 49
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.81 E-value=2.9e-19 Score=179.38 Aligned_cols=201 Identities=11% Similarity=0.062 Sum_probs=143.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeC--ChhHHHHHHHHhhhc--C-C-CCeeecC--CHhHHHhhcCCCcEEEE
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNR--TTSKVDETVERAKQE--G-N-LPLYGFH--DPESFVHSIQKPRVIIM 75 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr--~~~~~~~~~~~~~~~--~-~-~~~~~~~--s~~e~~~~l~~advIi~ 75 (484)
|||+|||+|.||..+|..|+++|++|++||| ++++.+.+.+.+... + . .++...+ ++++.++. +|+||+
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~D~vi~ 77 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLEN---AEVVLL 77 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTT---CSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhc---CCEEEE
Confidence 4899999999999999999999999999999 998888876543100 0 0 0124455 66676665 999999
Q ss_pred ecCCCchHHHHHHHHhhhcCCCCEEEecCCCC----hHHHHHHHHHHHHc-CC----eEEeccCCCCHHhhhcCC--ccc
Q 011501 76 LVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEW----YENTERRQKAVAEL-GL----LYLGMGVSGGEEGARYGP--SLM 144 (484)
Q Consensus 76 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~----~~~~~~~~~~l~~~-g~----~~i~~pv~gg~~~a~~g~--~i~ 144 (484)
|||+. .++++++.+.+ +.++++||+++++. |...+.+.+.+.+. |. .+...|.. ......|. .++
T Consensus 78 ~v~~~-~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~--~~~~~~g~~~~~~ 153 (335)
T 1txg_A 78 GVSTD-GVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAI--AREVAKRMPTTVV 153 (335)
T ss_dssp CSCGG-GHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCC--HHHHHTTCCEEEE
T ss_pred cCChH-HHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCc--HHHHHccCCcEEE
Confidence 99997 88999999999 98999999998664 33444555555542 33 12222321 11111233 344
Q ss_pred c-CCCHHHHHHHHHHHHHHhccCCCCCCceEEeCCc-----------------hhHHHHHHH-----HHHHHHHHHhHHH
Q 011501 145 P-GGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKG-----------------GSGNFVKMI-----HNGIEYGDMQLIA 201 (484)
Q Consensus 145 ~-gg~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~-----------------g~g~~~K~v-----~N~i~~~~~~~~~ 201 (484)
+ +++++.++.++++|+..+.+ +++.++. |....+|+. +|.......+++.
T Consensus 154 ~~~~~~~~~~~~~~ll~~~g~~-------~~~~~di~~~~~~k~~~N~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~ 226 (335)
T 1txg_A 154 FSSPSESSANKMKEIFETEYFG-------VEVTTDIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATRAIN 226 (335)
T ss_dssp EECSCHHHHHHHHHHHCBTTEE-------EEEESCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHhCCCcEE-------EEecCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Confidence 4 45788899999999887754 3556654 333445777 8888888899999
Q ss_pred HHHHHHHHhCCCCHHHHH
Q 011501 202 EAYDVLKSVGKLSNEELQ 219 (484)
Q Consensus 202 Ea~~l~~~~g~~~~~~i~ 219 (484)
|+..++++.| ++++++.
T Consensus 227 E~~~la~~~G-~~~~~~~ 243 (335)
T 1txg_A 227 EMAELIEILG-GDRETAF 243 (335)
T ss_dssp HHHHHHHHHT-SCGGGGG
T ss_pred HHHHHHHHHC-CCcchhh
Confidence 9999999999 9987653
No 50
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.81 E-value=7.7e-20 Score=182.07 Aligned_cols=251 Identities=16% Similarity=0.173 Sum_probs=165.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC-----C-CcEEEEeCChhHHHHHHH-HhhhcCC-------CCeeecCCHhHHHhhcC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEK-----G-FPISVYNRTTSKVDETVE-RAKQEGN-------LPLYGFHDPESFVHSIQ 68 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~-----G-~~V~v~dr~~~~~~~~~~-~~~~~~~-------~~~~~~~s~~e~~~~l~ 68 (484)
+|||+|||+|.||..+|.+|+++ | ++|++|+| +++.+.+.+ .+..... .++...++. +.+..
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~-- 83 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNP-AEVGT-- 83 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCH-HHHCC--
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCc-cccCC--
Confidence 36899999999999999999999 9 99999999 788888776 3321000 001111333 33444
Q ss_pred CCcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHH----cCCeEEeccCCCCH--HhhhcCCc
Q 011501 69 KPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAE----LGLLYLGMGVSGGE--EGARYGPS 142 (484)
Q Consensus 69 ~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~----~g~~~i~~pv~gg~--~~a~~g~~ 142 (484)
+|+||+|||+. +++++++.+.+.+.++++||++++.. ...+.+.+.+.+ .|+.++++++++.. .....|..
T Consensus 84 -~D~vil~vk~~-~~~~v~~~i~~~l~~~~~iv~~~nG~-~~~~~l~~~l~~~~v~~g~~~~~a~~~~pg~~~~~~~g~~ 160 (317)
T 2qyt_A 84 -VDYILFCTKDY-DMERGVAEIRPMIGQNTKILPLLNGA-DIAERMRTYLPDTVVWKGCVYISARKSAPGLITLEADREL 160 (317)
T ss_dssp -EEEEEECCSSS-CHHHHHHHHGGGEEEEEEEEECSCSS-SHHHHHTTTSCTTTBCEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred -CCEEEEecCcc-cHHHHHHHHHhhcCCCCEEEEccCCC-CcHHHHHHHCCCCcEEEEEEEEEEEEcCCCEEEEcCCCce
Confidence 99999999997 68999999999998899999998874 333444444433 35566777776421 22233442
Q ss_pred c-c----cCCCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHH-------------------HHHh
Q 011501 143 L-M----PGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEY-------------------GDMQ 198 (484)
Q Consensus 143 i-~----~gg~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~-------------------~~~~ 198 (484)
+ + .+++.+.+ .++++|+..+.+ +.+.++.+.+.+.|++.|.+.. ....
T Consensus 161 ~~ig~~~~~~~~~~~-~~~~ll~~~g~~-------~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~~~~~~ 232 (317)
T 2qyt_A 161 FYFGSGLPEQTDDEV-RLAELLTAAGIR-------AYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHEPELLS 232 (317)
T ss_dssp EEEECCSSSCCHHHH-HHHHHHHHTTCC-------EECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCHHHHHH
T ss_pred EEEcCCCCCCcCHHH-HHHHHHHHCCCC-------CEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 2 3 33457777 899999988854 4777889999999999998754 3458
Q ss_pred HHHHHHHHHHHhCCCCHH--HHHHHHHhhccCcchhhhhhhhccccccccCCCCchh--HHHhhhhcCCCCchHHHHHHH
Q 011501 199 LIAEAYDVLKSVGKLSNE--ELQQVFSEWNKGELLSFLIEITADIFGIKDDKGDGYL--VDKVLDKTGMKGTGKWTVQQA 274 (484)
Q Consensus 199 ~~~Ea~~l~~~~g~~~~~--~i~~~~~~~~~g~~~s~l~~~~~~~l~~~~~~~~~~~--l~~i~~~~~~k~tg~~~~~~A 274 (484)
++.|+..++++.| ++++ .+.+.+..... ........++. ++..++. ++.+ .| ++++.|
T Consensus 233 ~~~E~~~v~~a~G-~~~~~~~~~~~~~~~~~-----~~~~~~~sm~~---d~~~g~~~E~~~~--------~g-~~~~~a 294 (317)
T 2qyt_A 233 LLEEVAELFRAKY-GQVPDDVVQQLLDKQRK-----MPPESTSSMHS---DFLQGGSTEVETL--------TG-YVVREA 294 (317)
T ss_dssp HHHHHHHHHHHHT-SCCCSSHHHHHHHHHHH-----C-----------------------CTT--------TH-HHHHHH
T ss_pred HHHHHHHHHHHcC-CCCChHHHHHHHHHHhc-----cCCCCCChHHH---HHHcCCccCHHHH--------hh-HHHHHH
Confidence 9999999999999 8863 56665543211 01111111111 1222222 2222 23 788999
Q ss_pred HHcCCCcchHHH
Q 011501 275 ADLSVAAPTIES 286 (484)
Q Consensus 275 ~~~gvp~p~~~~ 286 (484)
+++|+|+|+...
T Consensus 295 ~~~gv~~P~~~~ 306 (317)
T 2qyt_A 295 EALRVDLPMYKR 306 (317)
T ss_dssp HHTTCCCHHHHH
T ss_pred HHcCCCCCHHHH
Confidence 999999998764
No 51
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.81 E-value=5.5e-21 Score=187.82 Aligned_cols=256 Identities=19% Similarity=0.221 Sum_probs=167.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCC-CCee-ecCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGN-LPLY-GFHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~-~~~~-~~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
|||+|||+|.||..+|.+|+++|++|++|||++++.+.+...+.. +. .... ..++. +.++. +|+||+|||+.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~-~~~~~~~~~~~~~-~~~~~---~d~vi~~v~~~- 74 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETD-GSIFNESLTANDP-DFLAT---SDLLLVTLKAW- 74 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTT-SCEEEEEEEESCH-HHHHT---CSEEEECSCGG-
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCC-CceeeeeeeecCc-cccCC---CCEEEEEecHH-
Confidence 489999999999999999999999999999998765443221100 00 0011 12343 45555 99999999997
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHH--cCCeEEeccCCCC-HHhhhcCC-cccc-CCCHHHHHHHH
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAE--LGLLYLGMGVSGG-EEGARYGP-SLMP-GGSFEAYKHIE 156 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~--~g~~~i~~pv~gg-~~~a~~g~-~i~~-gg~~~~~~~v~ 156 (484)
.++++++++.+.+.++++||+++++. ...+.+.+.+.+ .|..+.++...+. ...+..|. .+.. +++++.++.++
T Consensus 75 ~~~~v~~~l~~~l~~~~~vv~~~~g~-~~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~g~~~i~~~~~~~~~~~~~~ 153 (291)
T 1ks9_A 75 QVSDAVKSLASTLPVTTPILLIHNGM-GTIEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLA 153 (291)
T ss_dssp GHHHHHHHHHTTSCTTSCEEEECSSS-CTTGGGTTCCSCEEEEEECCEEEEETTEEEEEECCCEEEEESSGGGTTCTHHH
T ss_pred hHHHHHHHHHhhCCCCCEEEEecCCC-CcHHHHHHhcCCeEEEEEeEccEEcCCEEEEecccceEEccCCCCcchHHHHH
Confidence 68999999999999999999987764 233333333322 1222222222222 22344555 4443 55667788999
Q ss_pred HHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHH------------------HHHHhHHHHHHHHHHHhCCCCH--H
Q 011501 157 DILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIE------------------YGDMQLIAEAYDVLKSVGKLSN--E 216 (484)
Q Consensus 157 ~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~------------------~~~~~~~~Ea~~l~~~~g~~~~--~ 216 (484)
++|+.++.+ +++.++.+.+.+.|++.|... ....+++.|+..++++.| +++ +
T Consensus 154 ~ll~~~g~~-------~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~~E~~~va~a~G-~~~~~~ 225 (291)
T 1ks9_A 154 DILQTVLPD-------VAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREG-HHTSAE 225 (291)
T ss_dssp HHHHTTSSC-------EEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHHHHHHT-CCCCHH
T ss_pred HHHHhcCCC-------CeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHHHHHHHHHHHcC-CCCCHH
Confidence 999998854 478888899999999999887 677899999999999999 885 5
Q ss_pred HHHHHHHhhcc--CcchhhhhhhhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHH
Q 011501 217 ELQQVFSEWNK--GELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARF 292 (484)
Q Consensus 217 ~i~~~~~~~~~--g~~~s~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~ 292 (484)
.+.+.+..+.. +...|.+. .++... +. . .++.+ .| ++++.|+++|+|+|+... +++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~ssm~---~d~~~g-~~-~---e~~~~--------~g-~~~~~a~~~gv~~P~~~~-~~~~~ 285 (291)
T 1ks9_A 226 DLRDYVMQVIDATAENISSML---QDIRAL-RH-T---EIDYI--------NG-FLLRRARAHGIAVPENTR-LFEMV 285 (291)
T ss_dssp HHHHHHHHHHHHTTTCCCHHH---HHHHTT-CC-C---SGGGT--------HH-HHHHHHHHHTCCCHHHHH-HHHHH
T ss_pred HHHHHHHHHHhcCCCCCChHH---HHHHcC-Cc-c---HHHHH--------HH-HHHHHHHHhCCCCCHHHH-HHHHH
Confidence 55333322111 11122222 222221 11 1 12221 33 688999999999998764 34443
No 52
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.80 E-value=3.9e-19 Score=180.05 Aligned_cols=204 Identities=9% Similarity=0.015 Sum_probs=142.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCC-------CcEEEEeCChh-----HHHHHHHHhhhc----C---CCCeeecCCHh
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKG-------FPISVYNRTTS-----KVDETVERAKQE----G---NLPLYGFHDPE 61 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G-------~~V~v~dr~~~-----~~~~~~~~~~~~----~---~~~~~~~~s~~ 61 (484)
|++|||+|||+|.||..+|..|+++| ++|++|||+++ +.+.+.+.+... + ..++..+++++
T Consensus 6 m~~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVV 85 (354)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHH
Confidence 55579999999999999999999999 99999999998 777776532110 0 00255667888
Q ss_pred HHHhhcCCCcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCCh---HHHHHHHHHHHHc-C--CeEEeccCCCCHH
Q 011501 62 SFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWY---ENTERRQKAVAEL-G--LLYLGMGVSGGEE 135 (484)
Q Consensus 62 e~~~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~---~~~~~~~~~l~~~-g--~~~i~~pv~gg~~ 135 (484)
++++. +|+||+|||+. .++++++++.+.+.++++||+++++.. ...+.+.+.+.+. + ...+.+|....
T Consensus 86 ~~~~~---aD~Vilav~~~-~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~~~~~v~~gp~~a~-- 159 (354)
T 1x0v_A 86 QAAED---ADILIFVVPHQ-FIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLGIPMSVLMGANIAS-- 159 (354)
T ss_dssp HHHTT---CSEEEECCCGG-GHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHTCCEEEEECSCCHH--
T ss_pred HHHcC---CCEEEEeCCHH-HHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcCCCEEEEECCCcHH--
Confidence 87776 99999999985 899999999999989999999988542 2222232323221 3 22233332211
Q ss_pred hhhcC-C--ccccCCCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHH-----------------HHHHHHHHH
Q 011501 136 GARYG-P--SLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVK-----------------MIHNGIEYG 195 (484)
Q Consensus 136 ~a~~g-~--~i~~gg~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K-----------------~v~N~i~~~ 195 (484)
....| + .++.+++++..+.++++|+..+.+ +++.++.-...+.| +.+|.....
T Consensus 160 ~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~-------~~~~~di~~~~~~k~~~N~~~~~~g~~~~~~~~~n~~~~~ 232 (354)
T 1x0v_A 160 EVADEKFCETTIGCKDPAQGQLLKELMQTPNFR-------ITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAV 232 (354)
T ss_dssp HHHTTCCEEEEEECSSHHHHHHHHHHHCBTTEE-------EEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHhcCCceEEEEECCHHHHHHHHHHhCCCCEE-------EEEcCCchHhHHHHHHHHHHHHHHHHHHHccCCccHHHHH
Confidence 11234 2 334566888899999999887754 35555532233333 347777788
Q ss_pred HHhHHHHHHHHHHHhCCC---CHHHH
Q 011501 196 DMQLIAEAYDVLKSVGKL---SNEEL 218 (484)
Q Consensus 196 ~~~~~~Ea~~l~~~~g~~---~~~~i 218 (484)
...++.|+..++++.| + +++++
T Consensus 233 ~~~~~~E~~~la~a~G-~~~~~~~~~ 257 (354)
T 1x0v_A 233 IRLGLMEMIAFAKLFC-SGPVSSATF 257 (354)
T ss_dssp HHHHHHHHHHHHHHHS-SSCCCGGGG
T ss_pred HHHHHHHHHHHHHHhc-CCCCCcccc
Confidence 8999999999999998 8 87665
No 53
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.80 E-value=4.3e-19 Score=172.12 Aligned_cols=235 Identities=14% Similarity=0.115 Sum_probs=160.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhCC-CcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKG-FPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G-~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
|+|+|||+|.||..+|.+|+++| ++|++|||++++.+.+.+.. ++..+.++++++ . +|+||+||| +.+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~------g~~~~~~~~~~~-~---~D~vi~~v~-~~~ 69 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL------GVETSATLPELH-S---DDVLILAVK-PQD 69 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT------CCEEESSCCCCC-T---TSEEEECSC-HHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhc------CCEEeCCHHHHh-c---CCEEEEEeC-chh
Confidence 48999999999999999999999 99999999999988877642 255667777766 5 999999999 568
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCC-ccccCC--CHHHHHHHHHHH
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGP-SLMPGG--SFEAYKHIEDIL 159 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~-~i~~gg--~~~~~~~v~~ll 159 (484)
+++++.++.+ + +++||+++++... ..+.+.+. .+.+++.+ +.+.+.....|. .+++++ +++.++.++++|
T Consensus 70 ~~~v~~~l~~--~-~~ivv~~~~g~~~--~~l~~~~~-~~~~~v~~-~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~l~ 142 (263)
T 1yqg_A 70 MEAACKNIRT--N-GALVLSVAAGLSV--GTLSRYLG-GTRRIVRV-MPNTPGKIGLGVSGMYAEAEVSETDRRIADRIM 142 (263)
T ss_dssp HHHHHTTCCC--T-TCEEEECCTTCCH--HHHHHHTT-SCCCEEEE-ECCGGGGGTCEEEEEECCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHhcc--C-CCEEEEecCCCCH--HHHHHHcC-CCCcEEEE-cCCHHHHHcCceEEEEcCCCCCHHHHHHHHHHH
Confidence 8888877665 4 8999999554433 33444443 35678877 666666666666 677777 899999999999
Q ss_pred HHHhccCCCCCCceEEeC-C---------chhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCc
Q 011501 160 LKVAAQVPDSGPCVTYVG-K---------GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGE 229 (484)
Q Consensus 160 ~~i~~~~~~~~~~~~~~G-~---------~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~ 229 (484)
+.++.. ++++ + .|.+ +.+.+..+..+.|+ +.+.| ++++++.+++... .
T Consensus 143 ~~~g~~--------~~~~~~~~~~~~~al~g~~-------~~~~~~~~~~l~e~---~~~~G-~~~~~~~~~~~~~---~ 200 (263)
T 1yqg_A 143 KSVGLT--------VWLDDEEKMHGITGISGSG-------PAYVFYLLDALQNA---AIRQG-FDMAEARALSLAT---F 200 (263)
T ss_dssp HTTEEE--------EECSSTTHHHHHHHHTTSH-------HHHHHHHHHHHHHH---HHHTT-CCHHHHHHHHHHH---H
T ss_pred HhCCCE--------EEeCChhhccHHHHHHccH-------HHHHHHHHHHHHHH---HHHcC-CCHHHHHHHHHHH---H
Confidence 999853 4777 4 2222 22233444555565 67788 9999888887432 2
Q ss_pred chhh-hhhhhc--c-ccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHHHHHH
Q 011501 230 LLSF-LIEITA--D-IFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFL 293 (484)
Q Consensus 230 ~~s~-l~~~~~--~-~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~~r~~ 293 (484)
..+. ++.... + .+.. ..++|++.+....++ .++.|++.|+.. ++.+-+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~-------------l~~~~~~~~~~~-a~~~~~~ 253 (263)
T 1yqg_A 201 KGAVALAEQTGEDFEKLQK-NVTSKGGTTHEAVEA-------------FRRHRVAEAISE-GVCACVR 253 (263)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HTCCTTSHHHHHHHH-------------HHHTTHHHHHHH-HHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHH-hcCCCChhHHHHHHH-------------HHHCCHHHHHHH-HHHHHHH
Confidence 2222 332221 2 2222 235566665555443 366889988764 4444443
No 54
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.80 E-value=2.6e-18 Score=172.01 Aligned_cols=197 Identities=13% Similarity=0.131 Sum_probs=139.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCC----CcEEEEeCChh--HHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEE
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKG----FPISVYNRTTS--KVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVII 74 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G----~~V~v~dr~~~--~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi 74 (484)
|++|+|+|||+|.||.+||.+|+++| ++|++|||+++ +.+.+.+.+ +..+.++.++++. +|+||
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G-------~~~~~~~~e~~~~---aDvVi 89 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMG-------VKLTPHNKETVQH---SDVLF 89 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHT-------CEEESCHHHHHHH---CSEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcC-------CEEeCChHHHhcc---CCEEE
Confidence 34579999999999999999999999 89999999986 777775432 5677788888887 99999
Q ss_pred EecCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHc--CCeEEeccCCCCHHhhhcCCccccCCC---H
Q 011501 75 MLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAEL--GLLYLGMGVSGGEEGARYGPSLMPGGS---F 149 (484)
Q Consensus 75 ~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~--g~~~i~~pv~gg~~~a~~g~~i~~gg~---~ 149 (484)
+|||+ ..+++++.++.+.+.++++||+++++.+.. .+.+.+.+. +..++.+... .+.....|..++.+|+ +
T Consensus 90 lav~~-~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~--~l~~~l~~~~~~~~vv~~~p~-~p~~~~~g~~v~~~g~~~~~ 165 (322)
T 2izz_A 90 LAVKP-HIIPFILDEIGADIEDRHIVVSCAAGVTIS--SIEKKLSAFRPAPRVIRCMTN-TPVVVREGATVYATGTHAQV 165 (322)
T ss_dssp ECSCG-GGHHHHHHHHGGGCCTTCEEEECCTTCCHH--HHHHHHHTTSSCCEEEEEECC-GGGGGTCEEEEEEECTTCCH
T ss_pred EEeCH-HHHHHHHHHHHhhcCCCCEEEEeCCCCCHH--HHHHHHhhcCCCCeEEEEeCC-cHHHHcCCeEEEEeCCCCCH
Confidence 99995 589999999999998999999998776532 344555442 3455554322 2222233445666665 8
Q ss_pred HHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHH--HHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011501 150 EAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMI--HNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFS 223 (484)
Q Consensus 150 ~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v--~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~ 223 (484)
+.++.++++|+.+|.. +++.+........+. .+.+.+..+..++|+ +.+.| ++++++.+++.
T Consensus 166 ~~~~~v~~ll~~~G~~--------~~~~e~~~~~~~a~~g~gpa~~~~~~eala~a---~~~~G-l~~~~a~~l~~ 229 (322)
T 2izz_A 166 EDGRLMEQLLSSVGFC--------TEVEEDLIDAVTGLSGSGPAYAFTALDALADG---GVKMG-LPRRLAVRLGA 229 (322)
T ss_dssp HHHHHHHHHHHTTEEE--------EECCGGGHHHHHHHTTTHHHHHHHHHHHHHHH---HHHTT-CCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCE--------EEeCHHHHHHHHHHhcCHHHHHHHHHHHHHHH---HHHcC-CCHHHHHHHHH
Confidence 8999999999999864 445543333333332 233444444444444 46778 99999888874
No 55
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.79 E-value=5.1e-18 Score=169.08 Aligned_cols=171 Identities=15% Similarity=0.194 Sum_probs=136.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCC--cEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhH-HHhhcCCCcEEEEecCC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKQEGNLPLYGFHDPES-FVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e-~~~~l~~advIi~~vp~ 79 (484)
+++|||||+|.||.++|..|.++|+ +|++|||++++.+.+.+.+.. ...+.++++ +++. +|+||+|||.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~-----~~~~~~~~~~~~~~---aDvVilavp~ 104 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGII-----DEGTTSIAKVEDFS---PDFVMLSSPV 104 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSC-----SEEESCTTGGGGGC---CSEEEECSCG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCc-----chhcCCHHHHhhcc---CCEEEEeCCH
Confidence 4789999999999999999999999 999999999988877654321 145678888 7776 9999999998
Q ss_pred CchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe-ccCCCC----HHhhh----cCC-cccc---C
Q 011501 80 GSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG-MGVSGG----EEGAR----YGP-SLMP---G 146 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~-~pv~gg----~~~a~----~g~-~i~~---g 146 (484)
. .+.++++++.+.++++.+|+|++++.......+.+.+.. .|++ .|++|+ +..+. .|. .++. +
T Consensus 105 ~-~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~---~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~ 180 (314)
T 3ggo_A 105 R-TFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK---RFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKK 180 (314)
T ss_dssp G-GHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG---GEECEEECCCCCCCSGGGCCTTTTTTCEEEECCCTT
T ss_pred H-HHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC---CEEecCcccCCcccchhhhhhhhhcCCEEEEEeCCC
Confidence 7 688899999999999999999999987666666665543 6887 588885 33333 465 4444 4
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHH
Q 011501 147 GSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGI 192 (484)
Q Consensus 147 g~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i 192 (484)
++++.++.++++|+.+|.+ ++++++..-...+.++...-
T Consensus 181 ~~~~~~~~v~~l~~~~G~~-------v~~~~~~~hD~~~a~~s~lp 219 (314)
T 3ggo_A 181 TDKKRLKLVKRVWEDVGGV-------VEYMSPELHDYVFGVVSHLP 219 (314)
T ss_dssp SCHHHHHHHHHHHHHTTCE-------EEECCHHHHHHHHHHHTHHH
T ss_pred CCHHHHHHHHHHHHHcCCE-------EEEcCHHHHHHHHHHHHHHH
Confidence 6899999999999999976 48888877777777776543
No 56
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.76 E-value=4.3e-17 Score=156.85 Aligned_cols=192 Identities=14% Similarity=0.131 Sum_probs=135.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCC----cEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGF----PISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~----~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp 78 (484)
+|||+|||+|.||.+|+.+|+++|+ +|++|||++++.+.+.+.. ++..+.+++++++. +|+||+|||
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~------g~~~~~~~~e~~~~---aDvVilav~ 72 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY------GLTTTTDNNEVAKN---ADILILSIK 72 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH------CCEECSCHHHHHHH---CSEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh------CCEEeCChHHHHHh---CCEEEEEeC
Confidence 4689999999999999999999998 9999999999998887643 25678899999888 999999997
Q ss_pred CCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe----ccCCCCHHhhhcCC-cccc--CCCHHH
Q 011501 79 AGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG----MGVSGGEEGARYGP-SLMP--GGSFEA 151 (484)
Q Consensus 79 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~----~pv~gg~~~a~~g~-~i~~--gg~~~~ 151 (484)
+. .++++++++.+.++++++||..+++.... .+.+.+. .+..++. .|+.+ ..|. .++. +++++.
T Consensus 73 ~~-~~~~v~~~l~~~l~~~~~vvs~~~gi~~~--~l~~~~~-~~~~~v~~~p~~p~~~-----~~g~~~~~~~~~~~~~~ 143 (247)
T 3gt0_A 73 PD-LYASIINEIKEIIKNDAIIVTIAAGKSIE--STENAFN-KKVKVVRVMPNTPALV-----GEGMSALCPNEMVTEKD 143 (247)
T ss_dssp TT-THHHHC---CCSSCTTCEEEECSCCSCHH--HHHHHHC-SCCEEEEEECCGGGGG-----TCEEEEEEECTTCCHHH
T ss_pred HH-HHHHHHHHHHhhcCCCCEEEEecCCCCHH--HHHHHhC-CCCcEEEEeCChHHHH-----cCceEEEEeCCCCCHHH
Confidence 65 89999999999998999998655554322 3333332 3344443 23332 2344 3444 478999
Q ss_pred HHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCCHHHHHHHHH
Q 011501 152 YKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDV-LKSVGKLSNEELQQVFS 223 (484)
Q Consensus 152 ~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l-~~~~g~~~~~~i~~~~~ 223 (484)
++.++++|+.+|. ++++++.-.-.++-+. +-.-..+..+.|++.. +.+.| +++++..+++.
T Consensus 144 ~~~~~~l~~~~G~--------~~~~~e~~~d~~~a~~--g~gpa~~~~~~eal~~a~~~~G-l~~~~a~~~~~ 205 (247)
T 3gt0_A 144 LEDVLNIFNSFGQ--------TEIVSEKLMDVVTSVS--GSSPAYVYMIIEAMADAAVLDG-MPRNQAYKFAA 205 (247)
T ss_dssp HHHHHHHHGGGEE--------EEECCGGGHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH
T ss_pred HHHHHHHHHhCCC--------EEEeCHHHccHHHHHh--ccHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH
Confidence 9999999999996 3666542211122222 1112344566677766 67888 99999999874
No 57
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.76 E-value=2.2e-17 Score=162.14 Aligned_cols=198 Identities=15% Similarity=0.182 Sum_probs=140.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhh-------cC-C----------CCeeecCCHhHH
Q 011501 2 VQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQ-------EG-N----------LPLYGFHDPESF 63 (484)
Q Consensus 2 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~-------~~-~----------~~~~~~~s~~e~ 63 (484)
.+++|+|||+|.||.++|..|+++|++|++||+++++++.+.+.... .+ . .++..+.+++++
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 82 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQA 82 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHH
Confidence 45789999999999999999999999999999999988776654100 00 0 024567788887
Q ss_pred HhhcCCCcEEEEecCCCch-HHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCC-
Q 011501 64 VHSIQKPRVIIMLVKAGSP-VDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGP- 141 (484)
Q Consensus 64 ~~~l~~advIi~~vp~~~~-v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~- 141 (484)
++. +|+||++||...+ ...++.++.+.++++.++++.+++.+. .++.+.+.. +..+++...+. .+..++
T Consensus 83 ~~~---aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~--~~la~~~~~-~~~~ig~h~~~---p~~~~~l 153 (283)
T 4e12_A 83 VKD---ADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLP--SDLVGYTGR-GDKFLALHFAN---HVWVNNT 153 (283)
T ss_dssp TTT---CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCH--HHHHHHHSC-GGGEEEEEECS---STTTSCE
T ss_pred hcc---CCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCH--HHHHhhcCC-CcceEEEccCC---CcccCce
Confidence 776 9999999998743 446668888899999999976666543 234444422 22333332111 122344
Q ss_pred ccccCC---CHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHH
Q 011501 142 SLMPGG---SFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEEL 218 (484)
Q Consensus 142 ~i~~gg---~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i 218 (484)
..++.+ +++.++.++++++.++.. .++++..+.|. ++++.+ ...++|++.++++.+ .+++++
T Consensus 154 vevv~~~~t~~~~~~~~~~l~~~~g~~-------~v~v~~~~~g~---i~nr~~----~~~~~ea~~l~~~g~-~~~~~i 218 (283)
T 4e12_A 154 AEVMGTTKTDPEVYQQVVEFASAIGMV-------PIELKKEKAGY---VLNSLL----VPLLDAAAELLVDGI-ADPETI 218 (283)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHTTCE-------EEECSSCCTTT---THHHHH----HHHHHHHHHHHHTTS-CCHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCE-------EEEEecCCCCE---EehHHH----HHHHHHHHHHHHhCC-CCHHHH
Confidence 333333 789999999999999976 47886666665 333333 246799999999887 999999
Q ss_pred HHHHH
Q 011501 219 QQVFS 223 (484)
Q Consensus 219 ~~~~~ 223 (484)
.+++.
T Consensus 219 d~~~~ 223 (283)
T 4e12_A 219 DKTWR 223 (283)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99874
No 58
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.75 E-value=3.6e-17 Score=160.29 Aligned_cols=177 Identities=15% Similarity=0.201 Sum_probs=138.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC--cEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHh-hcCCCcEEEEecCCC
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVH-SIQKPRVIIMLVKAG 80 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~-~l~~advIi~~vp~~ 80 (484)
++|+|||+|.||..+|..|.++|+ +|++|||++++.+.+.+.+. ....+.+++++++ . +|+||+|||..
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~---aDvVilavp~~ 73 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI-----IDEGTTSIAKVEDFS---PDFVMLSSPVR 73 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS-----CSEEESCGGGGGGTC---CSEEEECSCHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCC-----cccccCCHHHHhcCC---CCEEEEcCCHH
Confidence 689999999999999999999999 99999999998877664332 1123567777776 6 99999999987
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe-ccCCCC----HHhhh----cCC-cccc---CC
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG-MGVSGG----EEGAR----YGP-SLMP---GG 147 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~-~pv~gg----~~~a~----~g~-~i~~---gg 147 (484)
.+.+++.++.+.++++.+|+++++........+.+.+.. + +++ .|++++ +..+. .|. .++. ++
T Consensus 74 -~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~-~--~v~~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~ 149 (281)
T 2g5c_A 74 -TFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK-R--FVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKT 149 (281)
T ss_dssp -HHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-G--EECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSSS
T ss_pred -HHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccc-c--ceeeccccCCccCChhhhhhHHhCCCCEEEecCCCC
Confidence 778899999998999999999999887666666666654 2 666 466654 33332 566 5555 67
Q ss_pred CHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhH
Q 011501 148 SFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQL 199 (484)
Q Consensus 148 ~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~ 199 (484)
+++.++.++++|+.++.+ ++++++...+..+|++.|+..+....+
T Consensus 150 ~~~~~~~v~~l~~~~g~~-------~~~~~~~~~d~~~~~~~~~~~~~a~~~ 194 (281)
T 2g5c_A 150 DKKRLKLVKRVWEDVGGV-------VEYMSPELHDYVFGVVSHLPHAVAFAL 194 (281)
T ss_dssp CHHHHHHHHHHHHHTTCE-------EEECCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCE-------EEEcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999965 478887777889999998876544433
No 59
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.74 E-value=1.7e-17 Score=174.20 Aligned_cols=189 Identities=14% Similarity=0.192 Sum_probs=139.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhh-------hcCCC----------CeeecCCHhHHHh
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK-------QEGNL----------PLYGFHDPESFVH 65 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~-------~~~~~----------~~~~~~s~~e~~~ 65 (484)
++||||||+|.||.+||.+|+++|++|++||+++++++.+.+... ..+.. +++.++++++ ++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHA-LA 83 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGG-GG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHH-hc
Confidence 468999999999999999999999999999999999887654210 00000 2456677754 45
Q ss_pred hcCCCcEEEEecCCCchHH-HHHHHHhhhcCCCCEEE-ecCCCChHHHHHHHHHHH----HcCCeEEe-ccCCCCHHhhh
Q 011501 66 SIQKPRVIIMLVKAGSPVD-QTIKTLSVYMEKGDCII-DGGNEWYENTERRQKAVA----ELGLLYLG-MGVSGGEEGAR 138 (484)
Q Consensus 66 ~l~~advIi~~vp~~~~v~-~vl~~l~~~l~~g~iiI-d~st~~~~~~~~~~~~l~----~~g~~~i~-~pv~gg~~~a~ 138 (484)
. +|+||+|||++..++ +++.++.+.++++.+|+ ++|+.++. ++.+.+. -.|.||++ +|++
T Consensus 84 ~---aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~---~ia~~~~~p~~~ig~hf~~Pa~v~------- 150 (483)
T 3mog_A 84 A---ADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISIT---AIAAEIKNPERVAGLHFFNPAPVM------- 150 (483)
T ss_dssp G---CSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH---HHTTTSSSGGGEEEEEECSSTTTC-------
T ss_pred C---CCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHH---HHHHHccCccceEEeeecChhhhC-------
Confidence 5 999999999986664 67788999999999985 56666543 2232221 12566666 3433
Q ss_pred cCC-ccccCC---CHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCC
Q 011501 139 YGP-SLMPGG---SFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLS 214 (484)
Q Consensus 139 ~g~-~i~~gg---~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~ 214 (484)
+ ..+++| ++++++.+.++++.+|+. ++++++. .| ++++|.+.. .++|++.++++.+ .+
T Consensus 151 --~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~-------~v~v~d~-~G---fi~Nr~l~~----~~~Ea~~l~~~g~-~~ 212 (483)
T 3mog_A 151 --KLVEVVSGLATAAEVVEQLCELTLSWGKQ-------PVRCHST-PG---FIVNRVARP----YYSEAWRALEEQV-AA 212 (483)
T ss_dssp --CEEEEEECSSCCHHHHHHHHHHHHHTTCE-------EEEEESC-TT---TTHHHHTHH----HHHHHHHHHHTTC-SC
T ss_pred --CeEEEecCCCCCHHHHHHHHHHHHHhCCE-------EEEEecc-Cc---chHHHHHHH----HHHHHHHHHHhCC-CC
Confidence 4 445555 899999999999999976 4888763 23 666665443 6799999999988 99
Q ss_pred HHHHHHHHH
Q 011501 215 NEELQQVFS 223 (484)
Q Consensus 215 ~~~i~~~~~ 223 (484)
++++.+++.
T Consensus 213 ~~~id~a~~ 221 (483)
T 3mog_A 213 PEVIDAALR 221 (483)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999985
No 60
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.74 E-value=9.1e-18 Score=169.98 Aligned_cols=280 Identities=16% Similarity=0.136 Sum_probs=161.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhc--C-CC----Ce-eecCCHhHHHhhcCCCcE
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQE--G-NL----PL-YGFHDPESFVHSIQKPRV 72 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~--~-~~----~~-~~~~s~~e~~~~l~~adv 72 (484)
|++|||+|||+|.||..+|..|+++|++|++|||++++.+.+.+.+... + .. .+ ..+.+++++++. +|+
T Consensus 2 m~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~D~ 78 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKD---ADV 78 (359)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTT---CSE
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhc---CCE
Confidence 3457999999999999999999999999999999999988887653100 0 00 11 345678887766 999
Q ss_pred EEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcC---CeEEe---ccCCCCHHhh---h----c
Q 011501 73 IIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELG---LLYLG---MGVSGGEEGA---R----Y 139 (484)
Q Consensus 73 Ii~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g---~~~i~---~pv~gg~~~a---~----~ 139 (484)
||+|+|.. ...++++++.+.+.++++||++.+..+ .+.++.+.+.+.+ +.|++ .|+.+...+. . .
T Consensus 79 vi~~v~~~-~~~~~~~~l~~~l~~~~~vv~~~~~~~-~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~gpg~v~~~~~~ 156 (359)
T 1bg6_A 79 ILIVVPAI-HHASIAANIASYISEGQLIILNPGATG-GALEFRKILRENGAPEVTIGETSSMLFTCRSERPGQVTVNAIK 156 (359)
T ss_dssp EEECSCGG-GHHHHHHHHGGGCCTTCEEEESSCCSS-HHHHHHHHHHHTTCCCCEEEEESSCSEEEECSSTTEEEEEEEC
T ss_pred EEEeCCch-HHHHHHHHHHHhCCCCCEEEEcCCCch-HHHHHHHHHHhcCCCCeEEEEecCCcEEEEeCCCCEEEEEEee
Confidence 99999997 568899999999999999999855333 3344555566654 55655 4554432211 0 0
Q ss_pred CC-cc--cc-CCCHHHHHHHHHHHHHHhccCCCCC-----C---ceEEeCCc--hhHHHHH---HH------HHHHHHHH
Q 011501 140 GP-SL--MP-GGSFEAYKHIEDILLKVAAQVPDSG-----P---CVTYVGKG--GSGNFVK---MI------HNGIEYGD 196 (484)
Q Consensus 140 g~-~i--~~-gg~~~~~~~v~~ll~~i~~~~~~~~-----~---~~~~~G~~--g~g~~~K---~v------~N~i~~~~ 196 (484)
+. .+ .. +++++.++.++++|..+... +.. . ++++.+.. +.+...| +. .+......
T Consensus 157 ~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~--~di~~k~~~nvn~~~n~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (359)
T 1bg6_A 157 GAMDFACLPAAKAGWALEQIGSVLPQYVAV--ENVLHTSLTNVNAVMHPLPTLLNAARCESGTPFQYYLEGITPSVGSLA 234 (359)
T ss_dssp SCEEEEEESGGGHHHHHHHHTTTCTTEEEC--SCHHHHHHCCHHHHHTHHHHHTTHHHHHTTCCCBHHHHHCCHHHHHHH
T ss_pred cceEEEeccccccHHHHHHHHHHhhhcEEc--CChHhhhccCCCccccHHHHHhhhchhhcCCccchhhcCCCHHHHHHH
Confidence 11 11 11 34555677777777544210 000 0 11111110 2333222 11 23345667
Q ss_pred HhHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchh-hhhhhhccccccccCCCCchhHH--HhhhhcCCCCchHHHHHH
Q 011501 197 MQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLS-FLIEITADIFGIKDDKGDGYLVD--KVLDKTGMKGTGKWTVQQ 273 (484)
Q Consensus 197 ~~~~~Ea~~l~~~~g~~~~~~i~~~~~~~~~g~~~s-~l~~~~~~~l~~~~~~~~~~~l~--~i~~~~~~k~tg~~~~~~ 273 (484)
.+++.|+..++++.| ++++.+.+.+.........+ +....+..++. |...+ ..++ .+.+|+. -+.| ..++.
T Consensus 235 ~~~~~E~~~va~a~G-~~~~~~~~~~~~~~~~~~~~l~~~~~~~sm~~--d~~~~-~e~~~~~~~~D~~-~~~g-~~~~~ 308 (359)
T 1bg6_A 235 EKVDAERIAIAKAFD-LNVPSVCEWYKESYGQSPATIYEAVQGNPAYR--GIAGP-INLNTRYFFEDVS-TGLV-PLSEL 308 (359)
T ss_dssp HHHHHHHHHHHHTTT-CCCCCHHHHC-------CCSHHHHHHTCGGGT--TCBCC-SSSCCHHHHHHHH-TTHH-HHHHH
T ss_pred HHHHHHHHHHHHHhC-CCCCcHHHHHHHHhCCCcccHHHHHhcchhhc--CCCCC-CCCCccceecCcC-ccHH-HHHHH
Confidence 889999999999998 98876666553211111110 00000112221 11111 1222 3344431 0112 68899
Q ss_pred HHHcCCCcchHHHHHHHHHHh
Q 011501 274 AADLSVAAPTIESSLDARFLS 294 (484)
Q Consensus 274 A~~~gvp~p~~~~av~~r~~s 294 (484)
|+++|+|+|+... +++.+..
T Consensus 309 a~~~gv~~P~~~~-l~~~~~~ 328 (359)
T 1bg6_A 309 GRAVNVPTPLIDA-VLDLISS 328 (359)
T ss_dssp HHHTTCCCHHHHH-HHHHHHH
T ss_pred HHHcCCCchHHHH-HHHHHHH
Confidence 9999999998775 4554443
No 61
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.73 E-value=2.9e-17 Score=159.16 Aligned_cols=186 Identities=16% Similarity=0.147 Sum_probs=133.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCC----CcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEe
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKG----FPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G----~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
|++|+|+|||+|.||..||.+|+++| ++|++|||++++ . ++..+.+++++++. +|+||+|
T Consensus 2 m~~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~-------g~~~~~~~~~~~~~---~D~vi~~ 65 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN------T-------TLNYMSSNEELARH---CDIIVCA 65 (262)
T ss_dssp CSSSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------S-------SSEECSCHHHHHHH---CSEEEEC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------C-------ceEEeCCHHHHHhc---CCEEEEE
Confidence 66789999999999999999999999 799999999876 1 25667788888887 9999999
Q ss_pred cCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHH--cCCeEEe-ccCCCCHHhhhcCCccccCC---CHH
Q 011501 77 VKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAE--LGLLYLG-MGVSGGEEGARYGPSLMPGG---SFE 150 (484)
Q Consensus 77 vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~--~g~~~i~-~pv~gg~~~a~~g~~i~~gg---~~~ 150 (484)
||+. .+++++.++.+.++++.+|.++++..+. .+.+.+.. +.+.++. .|+.+ ..|..++.++ +++
T Consensus 66 v~~~-~~~~v~~~l~~~l~~~~vv~~~~gi~~~---~l~~~~~~~~~~v~~~p~~p~~~-----~~g~~~~~~~~~~~~~ 136 (262)
T 2rcy_A 66 VKPD-IAGSVLNNIKPYLSSKLLISICGGLNIG---KLEEMVGSENKIVWVMPNTPCLV-----GEGSFIYCSNKNVNST 136 (262)
T ss_dssp SCTT-THHHHHHHSGGGCTTCEEEECCSSCCHH---HHHHHHCTTSEEEEEECCGGGGG-----TCEEEEEEECTTCCHH
T ss_pred eCHH-HHHHHHHHHHHhcCCCEEEEECCCCCHH---HHHHHhCCCCcEEEECCChHHHH-----cCCeEEEEeCCCCCHH
Confidence 9965 8999999999888444455556666653 23333332 1133432 23332 2345444434 788
Q ss_pred HHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHH--HHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011501 151 AYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMI--HNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFS 223 (484)
Q Consensus 151 ~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v--~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~ 223 (484)
.++.++++|+.+|. ++++++......+++. .|.+.+..+..+.|+ +.+.| ++++++.+++.
T Consensus 137 ~~~~~~~ll~~~G~--------~~~~~~~~~~~~~a~~~~~~~~~~~~~~al~~~---~~~~G-l~~~~~~~~~~ 199 (262)
T 2rcy_A 137 DKKYVNDIFNSCGI--------IHEIKEKDMDIATAISGCGPAYVYLFIESLIDA---GVKNG-LSRELSKNLVL 199 (262)
T ss_dssp HHHHHHHHHHTSEE--------EEECCGGGHHHHHHHTTSHHHHHHHHHHHHHHH---HHHTT-CCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC--------EEEeCHHHccHHHHHHccHHHHHHHHHHHHHHH---HHHcC-CCHHHHHHHHH
Confidence 99999999999985 3888876555566653 355556666555555 46788 99988887764
No 62
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.73 E-value=9.6e-17 Score=166.42 Aligned_cols=192 Identities=11% Similarity=0.113 Sum_probs=135.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHH--------HHHHhhhc------CCCCeeecCCHhHHHhhcC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDE--------TVERAKQE------GNLPLYGFHDPESFVHSIQ 68 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~--------~~~~~~~~------~~~~~~~~~s~~e~~~~l~ 68 (484)
+++|+|||+|.||.+||.+|+++|++|++||+++++... +.+.+.-. .-.+++.+++++ .++.
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~-- 130 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSN-- 130 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTT--
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHcc--
Confidence 478999999999999999999999999999999984321 22211000 000356677775 3444
Q ss_pred CCcEEEEecCCCchHH-HHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHH----cCCeEEeccCCCCHHhhhcCC--
Q 011501 69 KPRVIIMLVKAGSPVD-QTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAE----LGLLYLGMGVSGGEEGARYGP-- 141 (484)
Q Consensus 69 ~advIi~~vp~~~~v~-~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~----~g~~~i~~pv~gg~~~a~~g~-- 141 (484)
+|+||+|||.+..++ .++.++.+.++++.+|++.+++.+.+ ++++.+.. .|.+|++ |+. ..+
T Consensus 131 -aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~--~ia~~~~~p~r~iG~Hffn-Pv~-------~m~Lv 199 (460)
T 3k6j_A 131 -CDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLN--EISSVLRDPSNLVGIHFFN-PAN-------VIRLV 199 (460)
T ss_dssp -CSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHH--HHHTTSSSGGGEEEEECCS-STT-------TCCEE
T ss_pred -CCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHH--HHHHhccCCcceEEEEecc-hhh-------hCCEE
Confidence 999999999886665 56688999999999997755554432 33333321 2555555 332 233
Q ss_pred ccccCC--CHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHH
Q 011501 142 SLMPGG--SFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQ 219 (484)
Q Consensus 142 ~i~~gg--~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~ 219 (484)
-++.|. ++++++.+.++++.+++. ++++++ +.|. +.|.+.. ..++|++.++++.| ++++++.
T Consensus 200 EIv~g~~Ts~e~~~~~~~l~~~lGk~-------~v~v~d-~pGf----i~Nril~---~~~~EA~~l~~~~G-a~~e~ID 263 (460)
T 3k6j_A 200 EIIYGSHTSSQAIATAFQACESIKKL-------PVLVGN-CKSF----VFNRLLH---VYFDQSQKLMYEYG-YLPHQID 263 (460)
T ss_dssp EEECCSSCCHHHHHHHHHHHHHTTCE-------EEEESS-CCHH----HHHHHHH---HHHHHHHHHHHTSC-CCHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHHhCCE-------EEEEec-ccHH----HHHHHHH---HHHHHHHHHHHHcC-CCHHHHH
Confidence 355553 899999999999999976 488886 5553 3444443 35799999998888 9999999
Q ss_pred HHHHh
Q 011501 220 QVFSE 224 (484)
Q Consensus 220 ~~~~~ 224 (484)
+++..
T Consensus 264 ~a~~~ 268 (460)
T 3k6j_A 264 KIITN 268 (460)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99854
No 63
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.71 E-value=6.2e-17 Score=159.29 Aligned_cols=162 Identities=23% Similarity=0.289 Sum_probs=124.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC--CCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecC
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp 78 (484)
|.+|+|+|||+|.||..+|..|+++ |++|++|||++++.+.+.+.+. ....+.+++++++. +|+||+|||
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~---aDvVilavp 75 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGI-----VDEATADFKVFAAL---ADVIILAVP 75 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTS-----CSEEESCTTTTGGG---CSEEEECSC
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCC-----cccccCCHHHhhcC---CCEEEEcCC
Confidence 6678999999999999999999988 6899999999998887765331 11356678777776 999999999
Q ss_pred CCchHHHHHHHHhhh-cCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe-ccCCC----CHHhhh----cCC-ccc---
Q 011501 79 AGSPVDQTIKTLSVY-MEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG-MGVSG----GEEGAR----YGP-SLM--- 144 (484)
Q Consensus 79 ~~~~v~~vl~~l~~~-l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~-~pv~g----g~~~a~----~g~-~i~--- 144 (484)
+. .++++++++.+. ++++.+|+|++++.+..+..+.+.+..++++|++ .|++| ++..+. .|. .++
T Consensus 76 ~~-~~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~ 154 (290)
T 3b1f_A 76 IK-KTIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAANVNLFENAYYIFSPS 154 (290)
T ss_dssp HH-HHHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----CCTTSCCTTTTTTSEEEEEEC
T ss_pred HH-HHHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcchHHHhhHHHhCCCeEEEecC
Confidence 87 668899999998 8899999999998876666666665544788888 57766 333232 454 322
Q ss_pred cCCCHHHHHHHHHHHHHHhccCCCCCCceEEeCC
Q 011501 145 PGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGK 178 (484)
Q Consensus 145 ~gg~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~ 178 (484)
.+++++.++.++++|+.+|.+ ++++++
T Consensus 155 ~~~~~~~~~~v~~l~~~~G~~-------~~~~~~ 181 (290)
T 3b1f_A 155 CLTKPNTIPALQDLLSGLHAR-------YVEIDA 181 (290)
T ss_dssp TTCCTTHHHHHHHHTGGGCCE-------EEECCH
T ss_pred CCCCHHHHHHHHHHHHHcCCE-------EEEcCH
Confidence 357888999999999999965 366664
No 64
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.71 E-value=6.3e-16 Score=151.52 Aligned_cols=196 Identities=17% Similarity=0.177 Sum_probs=137.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCC---cEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEec
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKGF---PISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLV 77 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G~---~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~v 77 (484)
|++++|||||+|.||.+|+..|+++|+ +|++|||++++.+.+.+.. ++..+.+..++++. +|+||+||
T Consensus 1 M~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~------gi~~~~~~~~~~~~---aDvVilav 71 (280)
T 3tri_A 1 MNTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKC------GVHTTQDNRQGALN---ADVVVLAV 71 (280)
T ss_dssp -CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTT------CCEEESCHHHHHSS---CSEEEECS
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHc------CCEEeCChHHHHhc---CCeEEEEe
Confidence 777899999999999999999999999 9999999999998887642 36777888888877 99999999
Q ss_pred CCCchHHHHHHHHhhh-cCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEec-cCCCCHHhhhcCCc-cccC--CCHHHH
Q 011501 78 KAGSPVDQTIKTLSVY-MEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGM-GVSGGEEGARYGPS-LMPG--GSFEAY 152 (484)
Q Consensus 78 p~~~~v~~vl~~l~~~-l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~-pv~gg~~~a~~g~~-i~~g--g~~~~~ 152 (484)
|+ ..++++++++.+. ++++++||..+++.+. ..+.+.+. .+..++.+ |. .+.....|.. +..+ .+++.+
T Consensus 72 ~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~~--~~l~~~l~-~~~~vvr~mPn--~p~~v~~g~~~l~~~~~~~~~~~ 145 (280)
T 3tri_A 72 KP-HQIKMVCEELKDILSETKILVISLAVGVTT--PLIEKWLG-KASRIVRAMPN--TPSSVRAGATGLFANETVDKDQK 145 (280)
T ss_dssp CG-GGHHHHHHHHHHHHHTTTCEEEECCTTCCH--HHHHHHHT-CCSSEEEEECC--GGGGGTCEEEEEECCTTSCHHHH
T ss_pred CH-HHHHHHHHHHHhhccCCCeEEEEecCCCCH--HHHHHHcC-CCCeEEEEecC--ChHHhcCccEEEEeCCCCCHHHH
Confidence 87 4899999999998 8888899987766543 33444443 23444443 42 1222223333 3333 368999
Q ss_pred HHHHHHHHHHhccCCCCCCceEEeCCch-hHHHHHH--HHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011501 153 KHIEDILLKVAAQVPDSGPCVTYVGKGG-SGNFVKM--IHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFS 223 (484)
Q Consensus 153 ~~v~~ll~~i~~~~~~~~~~~~~~G~~g-~g~~~K~--v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~~~ 223 (484)
+.++++|+.+|.. +++.++. -..++-+ .-..+.+..+..+.|+ +.+.| +++++..++..
T Consensus 146 ~~v~~l~~~iG~~--------~~v~~E~~~d~~talsgsgpa~~~~~~eal~~a---~v~~G-l~~~~a~~l~~ 207 (280)
T 3tri_A 146 NLAESIMRAVGLV--------IWVSSEDQIEKIAALSGSGPAYIFLIMEALQEA---AEQLG-LTKETAELLTE 207 (280)
T ss_dssp HHHHHHHGGGEEE--------EECSSHHHHHHHHHHTTSHHHHHHHHHHHHHHH---HHHTT-CCHHHHHHHHH
T ss_pred HHHHHHHHHCCCe--------EEECCHHHhhHHHHHhccHHHHHHHHHHHHHHH---HHHcC-CCHHHHHHHHH
Confidence 9999999999963 5664421 1111111 1133445555555555 35777 99999988874
No 65
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.71 E-value=1.1e-16 Score=149.92 Aligned_cols=178 Identities=13% Similarity=0.102 Sum_probs=135.8
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCC-CCeeecCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGN-LPLYGFHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~-~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
|||+||| +|.||..++..|+++|++|.++||++++.+.+.+.....-. ..+. ..+++++++. +|+||+++|+.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~D~Vi~~~~~~- 75 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEA---CDIAVLTIPWE- 75 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHH---CSEEEECSCHH-
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhc---CCEEEEeCChh-
Confidence 4899999 99999999999999999999999999988777654210000 0133 3577777777 99999999975
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCCCh------------HHHHHHHHHHHHcCCeEEec--cCCCCHHhh--hcCC-ccc
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNEWY------------ENTERRQKAVAELGLLYLGM--GVSGGEEGA--RYGP-SLM 144 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~~~------------~~~~~~~~~l~~~g~~~i~~--pv~gg~~~a--~~g~-~i~ 144 (484)
.++++++++.+.+ ++++|+|+++... ...+++.+.+. +..++.+ |+.+..... ..+. .++
T Consensus 76 ~~~~~~~~l~~~~-~~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 152 (212)
T 1jay_A 76 HAIDTARDLKNIL-REKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLE--SEKVVSALHTIPAARFANLDEKFDWDVP 152 (212)
T ss_dssp HHHHHHHHTHHHH-TTSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHT--CSCEEECCTTCCHHHHHCTTCCCCEEEE
T ss_pred hHHHHHHHHHHHc-CCCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCC--CCeEEEEccchHHHHhhCcCCCCCccEE
Confidence 6788888888777 5899999998543 22556665554 4678887 665554443 4455 667
Q ss_pred cCCC-HHHHHHHHHHHHHH-hccCCCCCCceEEeCCchhHHHHHHHHHHHHHHH
Q 011501 145 PGGS-FEAYKHIEDILLKV-AAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGD 196 (484)
Q Consensus 145 ~gg~-~~~~~~v~~ll~~i-~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~ 196 (484)
++|+ ++.++.++++|+.+ |.+ ++++++.++++.+|++.|.+.+..
T Consensus 153 ~~g~~~~~~~~v~~l~~~~~G~~-------~~~~~~~~~a~~~k~~~~~~~~~~ 199 (212)
T 1jay_A 153 VCGDDDESKKVVMSLISEIDGLR-------PLDAGPLSNSRLVESLTPLILNIM 199 (212)
T ss_dssp EEESCHHHHHHHHHHHHHSTTEE-------EEEEESGGGHHHHHTHHHHHHHHH
T ss_pred EECCcHHHHHHHHHHHHHcCCCC-------ceeccchhHHHHhcchHHHHHHHH
Confidence 7775 89999999999999 865 489999999999999999776544
No 66
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.71 E-value=4e-16 Score=154.56 Aligned_cols=192 Identities=14% Similarity=0.199 Sum_probs=134.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhh-------hcCC---------------CCeeecCCH
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK-------QEGN---------------LPLYGFHDP 60 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~-------~~~~---------------~~~~~~~s~ 60 (484)
+++|+|||+|.||.+||..|+++|++|++||+++++++.+.+... ..|. .+++.++++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~ 94 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDA 94 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCH
Confidence 468999999999999999999999999999999998776432110 0000 025567788
Q ss_pred hHHHhhcCCCcEEEEecCCCchH-HHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHH----HcCCeEEeccCCCCHH
Q 011501 61 ESFVHSIQKPRVIIMLVKAGSPV-DQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVA----ELGLLYLGMGVSGGEE 135 (484)
Q Consensus 61 ~e~~~~l~~advIi~~vp~~~~v-~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~----~~g~~~i~~pv~gg~~ 135 (484)
++.++. +|+||+|||.+.++ +.++.++.+.++++.+|+..+++.+.. ++.+.+. -.|.+|++ |+
T Consensus 95 ~~~~~~---aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~--~l~~~~~~~~~~~g~h~~~-P~----- 163 (302)
T 1f0y_A 95 ASVVHS---TDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQIT--SIANATTRQDRFAGLHFFN-PV----- 163 (302)
T ss_dssp HHHTTS---CSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHH--HHHTTSSCGGGEEEEEECS-ST-----
T ss_pred HHhhcC---CCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHH--HHHHhcCCcccEEEEecCC-Cc-----
Confidence 877766 99999999987544 466788888888899888655554332 2333221 11344443 22
Q ss_pred hhhcCC--ccccC--CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Q 011501 136 GARYGP--SLMPG--GSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVG 211 (484)
Q Consensus 136 ~a~~g~--~i~~g--g~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g 211 (484)
..++ .++.| ++++.++.+.++++.+|.. ++++++. .| ++++|.+ ..+++|++.++++.+
T Consensus 164 --~~~~~~~i~~g~~~~~e~~~~~~~l~~~~G~~-------~v~~~~~-~g---~i~nr~l----~~~~~Ea~~l~~~g~ 226 (302)
T 1f0y_A 164 --PVMKLVEVIKTPMTSQKTFESLVDFSKALGKH-------PVSCKDT-PG---FIVNRLL----VPYLMEAIRLYERGD 226 (302)
T ss_dssp --TTCCEEEEECCTTCCHHHHHHHHHHHHHTTCE-------EEEECSC-TT---TTHHHHH----HHHHHHHHHHHHTTS
T ss_pred --ccCceEEEeCCCCCCHHHHHHHHHHHHHcCCc-------eEEecCc-cc---ccHHHHH----HHHHHHHHHHHHcCC
Confidence 1233 34444 3899999999999999965 4777752 33 4555543 356899999999987
Q ss_pred CCCHHHHHHHHH
Q 011501 212 KLSNEELQQVFS 223 (484)
Q Consensus 212 ~~~~~~i~~~~~ 223 (484)
++++++..++.
T Consensus 227 -~~~~~id~~~~ 237 (302)
T 1f0y_A 227 -ASKEDIDTAMK 237 (302)
T ss_dssp -SCHHHHHHHHH
T ss_pred -CCHHHHHHHHH
Confidence 99999988863
No 67
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.70 E-value=7.7e-17 Score=161.82 Aligned_cols=171 Identities=15% Similarity=0.167 Sum_probs=131.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhh-cCCCcEEEEecCCCc
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHS-IQKPRVIIMLVKAGS 81 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~-l~~advIi~~vp~~~ 81 (484)
.++|||||+|.||.+||++|.++|++|++|||++++.+.+.+.+ +..+.+++++++. .+.+|+||+|||..
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G-------~~~~~~~~e~~~~a~~~aDlVilavP~~- 79 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEG-------FDVSADLEATLQRAAAEDALIVLAVPMT- 79 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTT-------CCEESCHHHHHHHHHHTTCEEEECSCHH-
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-------CeeeCCHHHHHHhcccCCCEEEEeCCHH-
Confidence 46899999999999999999999999999999999888766543 4557788887653 12379999999975
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe-ccCCCCH-Hhhh-------cCC-ccccCC---C
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG-MGVSGGE-EGAR-------YGP-SLMPGG---S 148 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~-~pv~gg~-~~a~-------~g~-~i~~gg---~ 148 (484)
.+.++++++.+. .++.+|+|+++++......+.+.+. +..|++ .|++|++ .++. .|. .++..+ +
T Consensus 80 ~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~~~~--~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~~ 156 (341)
T 3ktd_A 80 AIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKARNM--QHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFD 156 (341)
T ss_dssp HHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHHTTC--GGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGGTS
T ss_pred HHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHHhCC--CCcEecCCccccccccchhhhhhHHhcCCeEEEEeCCCCC
Confidence 788999999886 7899999999998765555544432 578998 6999876 3332 233 444443 5
Q ss_pred HH--------HHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHH
Q 011501 149 FE--------AYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNG 191 (484)
Q Consensus 149 ~~--------~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~ 191 (484)
++ .++.++++|+.+|++ ++++++..--..+.++...
T Consensus 157 ~e~~~~~~~~~~~~v~~l~~~~Ga~-------v~~~~~~~HD~~~A~vshl 200 (341)
T 3ktd_A 157 GTDINSTWISIWKDVVQMALAVGAE-------VVPSRVGPHDAAAARVSHL 200 (341)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHTTCE-------EEECCHHHHHHHHHHHTHH
T ss_pred hhhhccchHHHHHHHHHHHHHcCCE-------EEEeCHHHHHHHHHHHhHH
Confidence 56 899999999999977 4888876666666666553
No 68
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.68 E-value=6.9e-16 Score=150.85 Aligned_cols=173 Identities=16% Similarity=0.179 Sum_probs=132.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
|+|+|||+|.||..+|..|.++|++|++|||++++.+.+.+.+. ....+.+++++ .. +|+||+|||+. .+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~-~~---~D~vi~av~~~-~~ 70 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQL-----VDEAGQDLSLL-QT---AKIIFLCTPIQ-LI 70 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTS-----CSEEESCGGGG-TT---CSEEEECSCHH-HH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCC-----CccccCCHHHh-CC---CCEEEEECCHH-HH
Confidence 48999999999999999999999999999999999888764331 11346677777 65 99999999976 78
Q ss_pred HHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEec-cCCCCH----Hhhh----cCC-cccc---CCCHH
Q 011501 84 DQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGM-GVSGGE----EGAR----YGP-SLMP---GGSFE 150 (484)
Q Consensus 84 ~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~-pv~gg~----~~a~----~g~-~i~~---gg~~~ 150 (484)
.++++++.+.++++.+|+++++..+...+.+.+.+ ..+++. |++|++ ..+. .|. .++. +++++
T Consensus 71 ~~~~~~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~----~~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~~~ 146 (279)
T 2f1k_A 71 LPTLEKLIPHLSPTAIVTDVASVKTAIAEPASQLW----SGFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPE 146 (279)
T ss_dssp HHHHHHHGGGSCTTCEEEECCSCCHHHHHHHHHHS----TTCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTCCHH
T ss_pred HHHHHHHHhhCCCCCEEEECCCCcHHHHHHHHHHh----CCEeecCcccCCccCCHHHHhHHHhCCCcEEEecCCCCCHH
Confidence 89999999999999999999888766554444332 256665 776543 2222 343 3332 45899
Q ss_pred HHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHH
Q 011501 151 AYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDM 197 (484)
Q Consensus 151 ~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~ 197 (484)
..+.++++|+.++.+ ++++++......+|++.|.-.+...
T Consensus 147 ~~~~v~~l~~~~g~~-------~~~~~~~~~~~~~~~~~~~p~~i~~ 186 (279)
T 2f1k_A 147 QLACLRSVLEPLGVK-------IYLCTPADHDQAVAWISHLPVMVSA 186 (279)
T ss_dssp HHHHHHHHHGGGTCE-------EEECCHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCE-------EEEcCHHHHHHHHHHHhhHHHHHHH
Confidence 999999999999965 4788888888899999997544443
No 69
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.67 E-value=2.1e-16 Score=158.90 Aligned_cols=254 Identities=19% Similarity=0.214 Sum_probs=155.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhc---C---CCCeeecCCHhHHHhhcCCCcEEE
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQE---G---NLPLYGFHDPESFVHSIQKPRVII 74 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~---~---~~~~~~~~s~~e~~~~l~~advIi 74 (484)
|++|||+|||+|.||..+|..|+++|++|++|+|+ +..+.+.+.+... + ..++..+++++++ .. +|+||
T Consensus 1 M~~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~---~D~Vi 75 (335)
T 3ghy_A 1 MSLTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAAL-GE---QDVVI 75 (335)
T ss_dssp -CCCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHHH-CC---CSEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHHc-CC---CCEEE
Confidence 77789999999999999999999999999999996 5666666543210 0 0012334567663 44 99999
Q ss_pred EecCCCchHHHHHHHHhhhcCCCCEEEecCCCCh------------------HHHHHHHHHHHHcC----CeEEeccCCC
Q 011501 75 MLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWY------------------ENTERRQKAVAELG----LLYLGMGVSG 132 (484)
Q Consensus 75 ~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~------------------~~~~~~~~~l~~~g----~~~i~~pv~g 132 (484)
+|||.. +++++++.+.+.+.++++||.+.|..+ ...+.+.+.+.... +.++.+...+
T Consensus 76 lavk~~-~~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~v~~gv~~~~a~~~~ 154 (335)
T 3ghy_A 76 VAVKAP-ALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTRHVLGCVVHLTCATVS 154 (335)
T ss_dssp ECCCHH-HHHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGGGEEEEEECCCEEESS
T ss_pred EeCCch-hHHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcccEEEEEEEEEEEEcC
Confidence 999995 889999999999999999999988842 11223344433221 1111111222
Q ss_pred CHHhhhcCC-ccccC----CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHH----------------
Q 011501 133 GEEGARYGP-SLMPG----GSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNG---------------- 191 (484)
Q Consensus 133 g~~~a~~g~-~i~~g----g~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~---------------- 191 (484)
.......+. .+.+| .+.+..+.+..+|+.-+-+ +....+.-...+.|++.|.
T Consensus 155 pg~v~~~~~g~~~iG~~~~~~~~~~~~l~~~l~~~g~~-------~~~~~di~~~~w~Kl~~na~~N~l~al~~~~~g~~ 227 (335)
T 3ghy_A 155 PGHIRHGNGRRLILGEPAGGASPRLASIAALFGRAGLQ-------AECSEAIQRDIWFKLWGNMTMNPVSVLTGATCDRI 227 (335)
T ss_dssp TTEEEECSCCEEEEECTTCSCCHHHHHHHHHHHHTTCE-------EEECSCHHHHHHHHHHTTTTHHHHHHHHCCCHHHH
T ss_pred CcEEEECCCCeEEEecCCCCcCHHHHHHHHHHHhCCCC-------cEeCchHHHHHHHHHHHHhhhhHHHHHhCCChHHH
Confidence 111111222 23333 3456677888888876643 2444445555667765442
Q ss_pred -----HHHHHHhHHHHHHHHHHHhCCCCH----HHHHHHHHhhccCcchhhhhhhhccccccccCCCCchhHHHhhhhcC
Q 011501 192 -----IEYGDMQLIAEAYDVLKSVGKLSN----EELQQVFSEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTG 262 (484)
Q Consensus 192 -----i~~~~~~~~~Ea~~l~~~~g~~~~----~~i~~~~~~~~~g~~~s~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~ 262 (484)
....+..++.|+..++++.| +++ +++.++.+ .. .....++..++...+. .-.+|.+..
T Consensus 228 ~~~~~~~~l~~~~~~E~~~va~a~G-~~~~~~~~~~~~~~~---~~--~~~~sSM~qD~~~gr~----~tEid~i~G--- 294 (335)
T 3ghy_A 228 LDDPLVSAFCLAVMAEAKAIGARIG-CPIEQSGEARSAVTR---QL--GAFKTSMLQDAEAGRG----PLEIDALVA--- 294 (335)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHTTT-CCCCSCHHHHHHHHH---TT--CSCCCTTTC-----CC----CCCHHHHTH---
T ss_pred hcChHHHHHHHHHHHHHHHHHHHcC-CCCCccHHHHHHHHh---cc--CCCCcHHHHHHHcCCC----CchHHHHhh---
Confidence 34566789999999999998 763 22333322 11 1112233344433210 135777766
Q ss_pred CCCchHHHHHHHHHcCCCcchHHH
Q 011501 263 MKGTGKWTVQQAADLSVAAPTIES 286 (484)
Q Consensus 263 ~k~tg~~~~~~A~~~gvp~p~~~~ 286 (484)
+.++.|+++|+|+|+...
T Consensus 295 ------~vv~~a~~~gv~~P~~~~ 312 (335)
T 3ghy_A 295 ------SVREIGLHVGVPTPQIDT 312 (335)
T ss_dssp ------HHHHHHHHHTCCCHHHHH
T ss_pred ------HHHHHHHHhCCCCCHHHH
Confidence 478999999999998764
No 70
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.67 E-value=5e-17 Score=153.70 Aligned_cols=162 Identities=15% Similarity=0.185 Sum_probs=117.8
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCcEEE-EeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKGFPISV-YNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v-~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
|+||||+|||+|.||..+|..|+++|++|.+ |||++++.+.+.+... +....+..+.++. +|+||++||.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g------~~~~~~~~~~~~~---aDvVilavp~ 91 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFG------ASVKAVELKDALQ---ADVVILAVPY 91 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHT------TTEEECCHHHHTT---SSEEEEESCG
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhC------CCcccChHHHHhc---CCEEEEeCCh
Confidence 4568999999999999999999999999999 9999999888776532 2333344555555 9999999997
Q ss_pred CchHHHHHHHHhhhcCCCCEEEecCCCCh------------HHHHHHHHHHHHcCCeEE------eccCCC-CHHhhhcC
Q 011501 80 GSPVDQTIKTLSVYMEKGDCIIDGGNEWY------------ENTERRQKAVAELGLLYL------GMGVSG-GEEGARYG 140 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~iiId~st~~~------------~~~~~~~~~l~~~g~~~i------~~pv~g-g~~~a~~g 140 (484)
. .+.+++.++.+ + ++++||++++..+ ...+.+.+.+. +..++ .+++.. ++. ...+
T Consensus 92 ~-~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~--~~~vv~~~~~~~~~v~~~g~~-~~~~ 165 (220)
T 4huj_A 92 D-SIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP--GAKVVKAFNTLPAAVLAADPD-KGTG 165 (220)
T ss_dssp G-GHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST--TCEEEEESCSSCHHHHTSCSB-CSSC
T ss_pred H-HHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC--CCCEEECCCCCCHHHhhhCcc-cCCC
Confidence 5 78888888877 5 6889999998763 14455555553 22222 223332 222 2223
Q ss_pred C--ccccCCCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHH
Q 011501 141 P--SLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNF 184 (484)
Q Consensus 141 ~--~i~~gg~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~ 184 (484)
+ .++.|.++++.+.++++|+.+|.+ ++++|+.+.|..
T Consensus 166 ~~~v~~~g~~~~~~~~v~~l~~~~G~~-------~~~~G~l~~a~~ 204 (220)
T 4huj_A 166 SRVLFLSGNHSDANRQVAELISSLGFA-------PVDLGTLAASGP 204 (220)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHHTTCE-------EEECCSHHHHHH
T ss_pred CeeEEEeCCCHHHHHHHHHHHHHhCCC-------eEeeCChhhcch
Confidence 3 345566899999999999999976 599999777754
No 71
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.47 E-value=6.8e-18 Score=157.42 Aligned_cols=158 Identities=20% Similarity=0.197 Sum_probs=114.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
.|+|+|||+|.||..+|.+|.+.|++|++|||+++ .+.+...+ +... +++++++. +|+||++||+. +
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g-------~~~~-~~~~~~~~---aDvVilav~~~-~ 85 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRG-------AEVL-CYSEAASR---SDVIVLAVHRE-H 85 (201)
Confidence 46899999999999999999999999999999987 44443322 3334 66677666 99999999986 6
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCC--------------HHhhhcCC--ccccC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGG--------------EEGARYGP--SLMPG 146 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg--------------~~~a~~g~--~i~~g 146 (484)
++.++ ++.+ +.++++|||+++..+... +...+..+++.++.++ ..+...|. .+++|
T Consensus 86 ~~~v~-~l~~-~~~~~ivI~~~~G~~~~~------~~~~~~~~l~~~~~~~~vvra~~n~~a~~~~~g~l~g~~~~~~~g 157 (201)
T 2yjz_A 86 YDFLA-ELAD-SLKGRVLIDVSNNQKMNQ------YPESNAEYLAQLVPGAHVVKAFNTISAWALQSGTLDASRQVFVCG 157 (201)
Confidence 77776 4544 347899999999986322 1112223333332222 11221222 57788
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHH
Q 011501 147 GSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMI 188 (484)
Q Consensus 147 g~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v 188 (484)
++++.++.++++|+.+|.++ +++|+.|.|..+|.+
T Consensus 158 ~~~~~~~~v~~ll~~~G~~~-------~~~G~l~~a~~~e~~ 192 (201)
T 2yjz_A 158 NDSKAKDRVMDIARTLGLTP-------LDQGSLVAAKEIENY 192 (201)
Confidence 89999999999999999874 899999999998865
No 72
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.65 E-value=1.9e-15 Score=150.90 Aligned_cols=252 Identities=12% Similarity=0.139 Sum_probs=157.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcC--C----CCeeecCCHhHHHhhcCCCcEEEEe
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEG--N----LPLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~--~----~~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
++||+|||+|.||..+|..|+++|++|++| +++++++.+.+.+.... + .++..++++++ +.. +|+||++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~---~D~vila 93 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQG---ADLVLFC 93 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTT---CSEEEEC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCC---CCEEEEE
Confidence 479999999999999999999999999999 99988888876542100 0 02334556654 344 9999999
Q ss_pred cCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHc---CCeEEeccCCCCHHhhhcCC-ccccCCCHHHH
Q 011501 77 VKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAEL---GLLYLGMGVSGGEEGARYGP-SLMPGGSFEAY 152 (484)
Q Consensus 77 vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~---g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~~~ 152 (484)
||.. +++++++.+.+.+.++++||.++++.... ..+.+.+.+. ++.+..+..+|.......+. .+.+|. .+..
T Consensus 94 vk~~-~~~~~l~~l~~~l~~~~~iv~~~nGi~~~-~~l~~~~~~~vl~g~~~~~a~~~gP~~~~~~~~g~~~ig~-~~~~ 170 (318)
T 3hwr_A 94 VKST-DTQSAALAMKPALAKSALVLSLQNGVENA-DTLRSLLEQEVAAAVVYVATEMAGPGHVRHHGRGELVIEP-TSHG 170 (318)
T ss_dssp CCGG-GHHHHHHHHTTTSCTTCEEEEECSSSSHH-HHHHHHCCSEEEEEEEEEEEEEEETTEEEEEEEEEEEECC-CTTT
T ss_pred cccc-cHHHHHHHHHHhcCCCCEEEEeCCCCCcH-HHHHHHcCCcEEEEEEEEeEEEcCCeEEEEcCCceEEEcC-CHHH
Confidence 9997 89999999999999999999998886432 3444444210 11112222222111111122 233444 3445
Q ss_pred HHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHH---------------------HHHHhHHHHHHHHHHHhC
Q 011501 153 KHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIE---------------------YGDMQLIAEAYDVLKSVG 211 (484)
Q Consensus 153 ~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~---------------------~~~~~~~~Ea~~l~~~~g 211 (484)
+.++.+|..-+-+ ++...+.-...+.|++-|... .....++.|+..++++.|
T Consensus 171 ~~l~~~l~~~~~~-------~~~~~Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~~~~~~~l~~~~~~E~~~va~a~G 243 (318)
T 3hwr_A 171 ANLAAIFAAAGVP-------VETSDNVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVMRDVMEECFAVARAEG 243 (318)
T ss_dssp HHHHHHHHHTTCC-------EEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSTTHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCC-------cEechHHHHHHHHHHHHHhhhhHHHHHHCCCHHHHhcChhHHHHHHHHHHHHHHHHHHcC
Confidence 6788888876643 344455666778888777422 334568899999999998
Q ss_pred CCCH--HHHHHHHHhhccCcchhhhhhhhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHH
Q 011501 212 KLSN--EELQQVFSEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIES 286 (484)
Q Consensus 212 ~~~~--~~i~~~~~~~~~g~~~s~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~ 286 (484)
++. +....++....... ....++..++...+. ..+|.+.. +.++.|+++|+|+|+...
T Consensus 244 -~~l~~~~~~~~~~~~~~~~--~~~sSM~qD~~~gr~-----tEid~i~G---------~vv~~a~~~gv~tP~~~~ 303 (318)
T 3hwr_A 244 -VKLPDDVALAIRRIAETMP--RQSSSTAQDLARGKR-----SEIDHLNG---------LIVRRGDALGIPVPANRV 303 (318)
T ss_dssp -CCCCTTHHHHHHHHHHHST--TCCCHHHHHHHTTCC-----CSGGGTHH---------HHHHHHHHTTCCCHHHHH
T ss_pred -CCCChHHHHHHHHHHHhcC--CCCcHHHHHHHcCCh-----hHHHHHHH---------HHHHHHHHhCCCCcHHHH
Confidence 762 21122211111111 222333444443221 24555544 578999999999998764
No 73
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.65 E-value=1.1e-16 Score=156.68 Aligned_cols=183 Identities=9% Similarity=0.050 Sum_probs=123.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
+|+|||||+|.||..|+..|+++ ++| .+|||++++.+.+.+.. +. .+.+++++++. +|+||+|||+.
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~------g~-~~~~~~~~~~~---~DvVilav~~~- 69 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVY------GG-KAATLEKHPEL---NGVVFVIVPDR- 69 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHT------CC-CCCSSCCCCC------CEEECSCTT-
T ss_pred CceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHc------CC-ccCCHHHHHhc---CCEEEEeCChH-
Confidence 46899999999999999999998 999 59999999988876543 23 45677776665 99999999997
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhh--cCCccccCCCHHHHHHHHHHH
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGAR--YGPSLMPGGSFEAYKHIEDIL 159 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~--~g~~i~~gg~~~~~~~v~~ll 159 (484)
.+.+++.++. .++++||++|+..+.+..+.. ..+..+...++++++.... .+..++++++++.++.++++|
T Consensus 70 ~~~~v~~~l~---~~~~ivi~~s~~~~~~~l~~~----~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 142 (276)
T 2i76_A 70 YIKTVANHLN---LGDAVLVHCSGFLSSEIFKKS----GRASIHPNFSFSSLEKALEMKDQIVFGLEGDERGLPIVKKIA 142 (276)
T ss_dssp THHHHHTTTC---CSSCCEEECCSSSCGGGGCSS----SEEEEEECSCC--CTTGGGCGGGCCEEECCCTTTHHHHHHHH
T ss_pred HHHHHHHHhc---cCCCEEEECCCCCcHHHHHHh----hccccchhhhcCCCchhHHHhCCCeEEEEeChHHHHHHHHHH
Confidence 5777776654 578999999977655432211 1112223345666554433 333567778888899999999
Q ss_pred HHHhccCCCCCCceEEeCCchhH---HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHH
Q 011501 160 LKVAAQVPDSGPCVTYVGKGGSG---NFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNE 216 (484)
Q Consensus 160 ~~i~~~~~~~~~~~~~~G~~g~g---~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~ 216 (484)
+.+|.+ ++++++.+.. ...+++.|.+. .++.|+..++.+.| ++.+
T Consensus 143 ~~lG~~-------~~~v~~~~~~~~~~~~~l~~n~~~----~~~~~a~~~~~~~G-l~~~ 190 (276)
T 2i76_A 143 EEISGK-------YFVIPSEKKKAYHLAAVIASNFPV----ALAYLSKRIYTLLG-LDEP 190 (276)
T ss_dssp HHHCSC-------EEECCGGGHHHHHHHHHHHHTTHH----HHHHHHHHHHHTTT-CSCH
T ss_pred HHhCCC-------EEEECHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHcC-CChH
Confidence 999965 4888864422 34467777554 35678888888888 9987
No 74
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.64 E-value=2.9e-15 Score=156.88 Aligned_cols=191 Identities=15% Similarity=0.229 Sum_probs=134.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHH-----------hhhcC----CCCeeecCCHhHHHhh
Q 011501 2 VQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVER-----------AKQEG----NLPLYGFHDPESFVHS 66 (484)
Q Consensus 2 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~-----------~~~~~----~~~~~~~~s~~e~~~~ 66 (484)
.+++|+|||+|.||.+||..|+++|++|++||+++++++.+.+. +.-.. ......+++++ .++.
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~-~~~~ 114 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTK-ELST 114 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGG-GGTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHH-HHCC
Confidence 35689999999999999999999999999999999887765432 10000 00123455663 3444
Q ss_pred cCCCcEEEEecCCCchH-HHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHH----cCCeEEeccCCCCHHhhhcCC
Q 011501 67 IQKPRVIIMLVKAGSPV-DQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAE----LGLLYLGMGVSGGEEGARYGP 141 (484)
Q Consensus 67 l~~advIi~~vp~~~~v-~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~----~g~~~i~~pv~gg~~~a~~g~ 141 (484)
+|+||+|||....+ ..++.++.+.++++.+|++ +|+.+..+ ++.+.+.. .|.||+ .|+. .++
T Consensus 115 ---aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~s-nTs~~~~~-~la~~~~~~~~~ig~hf~-~P~~-------~~~ 181 (463)
T 1zcj_A 115 ---VDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCT-NTSALNVD-DIASSTDRPQLVIGTHFF-SPAH-------VMR 181 (463)
T ss_dssp ---CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEE-CCSSSCHH-HHHTTSSCGGGEEEEEEC-SSTT-------TCC
T ss_pred ---CCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEe-CCCCcCHH-HHHHHhcCCcceEEeecC-CCcc-------cce
Confidence 99999999987544 4666888888989999987 44444444 44443321 256665 4543 223
Q ss_pred --ccccC--CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHH
Q 011501 142 --SLMPG--GSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEE 217 (484)
Q Consensus 142 --~i~~g--g~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~ 217 (484)
.++.| +++++++.++++++.+++. ++++++ ..|. +.|.+... .++|++.++++ | +++++
T Consensus 182 lvevv~g~~t~~e~~~~~~~l~~~lGk~-------~v~v~~-~~gf----i~Nrll~~---~~~ea~~l~~~-G-~~~~~ 244 (463)
T 1zcj_A 182 LLEVIPSRYSSPTTIATVMSLSKKIGKI-------GVVVGN-CYGF----VGNRMLAP---YYNQGFFLLEE-G-SKPED 244 (463)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHTTCE-------EEEBCC-STTT----THHHHHHH---HHHHHHHHHHT-T-CCHHH
T ss_pred eEEEeCCCCCCHHHHHHHHHHHHHhCCE-------EEEECC-CccH----HHHHHHHH---HHHHHHHHHHc-C-CCHHH
Confidence 34443 6899999999999999965 488886 3443 44544433 35999999887 7 99999
Q ss_pred HHHHHH
Q 011501 218 LQQVFS 223 (484)
Q Consensus 218 i~~~~~ 223 (484)
+.+++.
T Consensus 245 id~~~~ 250 (463)
T 1zcj_A 245 VDGVLE 250 (463)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999985
No 75
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.63 E-value=3e-15 Score=147.98 Aligned_cols=178 Identities=16% Similarity=0.170 Sum_probs=133.3
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
++|+||| +|.||.++|..|+++|++|++|||+++. ++.+++.. +|+||+|||.. .
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--------------------~~~~~~~~---aDvVilavp~~-~ 77 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--------------------VAESILAN---ADVVIVSVPIN-L 77 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--------------------GHHHHHTT---CSEEEECSCGG-G
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--------------------CHHHHhcC---CCEEEEeCCHH-H
Confidence 5899999 9999999999999999999999998642 33455555 99999999987 6
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEec-cCCCCHHhhhcCC-cccc-CCCHHHHHHHHHHH
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGM-GVSGGEEGARYGP-SLMP-GGSFEAYKHIEDIL 159 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~-pv~gg~~~a~~g~-~i~~-gg~~~~~~~v~~ll 159 (484)
+.++++++.+.++++.+|+|++++.......+.+. .+..|++. |++|++.....|. .++. +.+++.++.++++|
T Consensus 78 ~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~---~~~~~v~~hP~~g~~~~~~~g~~~~l~~~~~~~~~~~v~~l~ 154 (298)
T 2pv7_A 78 TLETIERLKPYLTENMLLADLTSVKREPLAKMLEV---HTGAVLGLHPMFGADIASMAKQVVVRCDGRFPERYEWLLEQI 154 (298)
T ss_dssp HHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHH---CSSEEEEEEECSCTTCSCCTTCEEEEEEEECGGGTHHHHHHH
T ss_pred HHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHh---cCCCEEeeCCCCCCCchhhcCCeEEEecCCCHHHHHHHHHHH
Confidence 99999999999999999999998876555444333 34678875 8888765555665 4443 44788899999999
Q ss_pred HHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHH
Q 011501 160 LKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQ 220 (484)
Q Consensus 160 ~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~ 220 (484)
+.+|.+ ++++++......++++.++-.+....+ .+++ ...| ++.++..+
T Consensus 155 ~~~G~~-------~~~~~~~~~d~~~a~~~~~p~~~a~~l-~~~l---~~~g-~~~~~~~~ 203 (298)
T 2pv7_A 155 QIWGAK-------IYQTNATEHDHNMTYIQALRHFSTFAN-GLHL---SKQP-INLANLLA 203 (298)
T ss_dssp HHTTCE-------EEECCHHHHHHHHHHHTHHHHHHHHHH-HHHH---TTSS-CCHHHHHH
T ss_pred HHcCCE-------EEECCHHHHHHHHHHHHHHHHHHHHHH-HHHH---HhcC-CCHHHHHh
Confidence 999975 477776666778888877654433322 2332 1356 88766544
No 76
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.62 E-value=2.4e-15 Score=165.23 Aligned_cols=191 Identities=14% Similarity=0.189 Sum_probs=133.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHH-------hhhcCCC----------CeeecCCHhHHH
Q 011501 2 VQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVER-------AKQEGNL----------PLYGFHDPESFV 64 (484)
Q Consensus 2 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~-------~~~~~~~----------~~~~~~s~~e~~ 64 (484)
..++|||||+|.||.+||.+|+++||+|++||+++++++..... ....|.. +++.++++ +.+
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~ 391 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDF 391 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTG
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHH
Confidence 34689999999999999999999999999999999987764221 0000000 14556677 445
Q ss_pred hhcCCCcEEEEecCCCchHH-HHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHH----cCCeEEeccCCCCHHhhhc
Q 011501 65 HSIQKPRVIIMLVKAGSPVD-QTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAE----LGLLYLGMGVSGGEEGARY 139 (484)
Q Consensus 65 ~~l~~advIi~~vp~~~~v~-~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~----~g~~~i~~pv~gg~~~a~~ 139 (484)
+. +|+||+|||++..++ .++.++.+.++++.+|++.+++.+.+ ++.+.+.. .|.||++ |+. .
T Consensus 392 ~~---aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~--~la~~~~~~~~~ig~hf~~-P~~-------~ 458 (715)
T 1wdk_A 392 GN---VDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISIS--LLAKALKRPENFVGMHFFN-PVH-------M 458 (715)
T ss_dssp GG---CSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHH--HHGGGCSCGGGEEEEECCS-STT-------T
T ss_pred CC---CCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHH--HHHHHhcCccceEEEEccC-Ccc-------c
Confidence 55 999999999986665 56688888899999998765554432 23332211 2455554 332 2
Q ss_pred CC--ccccCC--CHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCH
Q 011501 140 GP--SLMPGG--SFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSN 215 (484)
Q Consensus 140 g~--~i~~gg--~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~ 215 (484)
++ .++.|. ++++++.+.++++.+|+. ++++++. .|. +.|.+.. ..++|++.++++ | +++
T Consensus 459 ~~lvevv~g~~t~~e~~~~~~~l~~~lGk~-------~v~v~d~-~Gf----i~Nril~---~~~~Ea~~l~~~-G-~~~ 521 (715)
T 1wdk_A 459 MPLVEVIRGEKSSDLAVATTVAYAKKMGKN-------PIVVNDC-PGF----LVNRVLF---PYFGGFAKLVSA-G-VDF 521 (715)
T ss_dssp CCEEEEEECSSCCHHHHHHHHHHHHHTTCE-------EEEEESC-TTT----THHHHHH---HHHHHHHHHHHT-T-CCH
T ss_pred CceEEEEECCCCCHHHHHHHHHHHHHhCCE-------eEEEcCC-CCh----hhhHHHH---HHHHHHHHHHHC-C-CCH
Confidence 33 345554 899999999999999965 4888863 443 3444443 467999999997 7 999
Q ss_pred HHHHHHHH
Q 011501 216 EELQQVFS 223 (484)
Q Consensus 216 ~~i~~~~~ 223 (484)
+++.+++.
T Consensus 522 ~~id~~~~ 529 (715)
T 1wdk_A 522 VRIDKVME 529 (715)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998873
No 77
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.62 E-value=3.1e-15 Score=164.45 Aligned_cols=190 Identities=15% Similarity=0.209 Sum_probs=134.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHh-------hhcCC----------CCeeecCCHhHHHh
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERA-------KQEGN----------LPLYGFHDPESFVH 65 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~-------~~~~~----------~~~~~~~s~~e~~~ 65 (484)
+++|+|||+|.||.+||.+|+++||+|++||+++++++...+.. ...|. -+++.+++++ .++
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~-~~~ 390 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYE-SFR 390 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSSG-GGT
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCHH-HHC
Confidence 46899999999999999999999999999999999877653310 00000 0355666773 444
Q ss_pred hcCCCcEEEEecCCCchHH-HHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHH----cCCeEEeccCCCCHHhhhcC
Q 011501 66 SIQKPRVIIMLVKAGSPVD-QTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAE----LGLLYLGMGVSGGEEGARYG 140 (484)
Q Consensus 66 ~l~~advIi~~vp~~~~v~-~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~----~g~~~i~~pv~gg~~~a~~g 140 (484)
. +|+||+|||++..++ .++.++.+.++++.+|++.+++.+.+ ++.+.+.. .|.||++ |+. ..
T Consensus 391 ~---aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~--~la~~~~~p~~~iG~hf~~-P~~-------~~ 457 (725)
T 2wtb_A 391 D---VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLN--KIGERTKSQDRIVGAHFFS-PAH-------IM 457 (725)
T ss_dssp T---CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH--HHTTTCSCTTTEEEEEECS-STT-------TC
T ss_pred C---CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHH--HHHHHhcCCCCEEEecCCC-Ccc-------cC
Confidence 4 999999999986654 56688888999999987765554433 23322211 2566665 432 23
Q ss_pred C--ccccCC--CHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHH
Q 011501 141 P--SLMPGG--SFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNE 216 (484)
Q Consensus 141 ~--~i~~gg--~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~ 216 (484)
+ .++.|. ++++++.+.++++.+++. ++++++. .|. +.|.+.. ..++|++.++++ | ++++
T Consensus 458 ~lvevv~g~~t~~e~~~~~~~l~~~lGk~-------~v~v~d~-~Gf----i~Nril~---~~~~Ea~~l~~~-G-~~~e 520 (725)
T 2wtb_A 458 PLLEIVRTNHTSAQVIVDLLDVGKKIKKT-------PVVVGNC-TGF----AVNRMFF---PYTQAAMFLVEC-G-ADPY 520 (725)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHTTCE-------EEEEESS-TTT----THHHHHH---HHHHHHHHHHHT-T-CCHH
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHHhCCE-------EEEECCC-ccH----HHHHHHH---HHHHHHHHHHHC-C-CCHH
Confidence 3 344553 899999999999999965 4888863 443 3454443 467999999997 7 9999
Q ss_pred HHHHHHH
Q 011501 217 ELQQVFS 223 (484)
Q Consensus 217 ~i~~~~~ 223 (484)
++.+++.
T Consensus 521 ~id~~~~ 527 (725)
T 2wtb_A 521 LIDRAIS 527 (725)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999874
No 78
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.61 E-value=2.6e-15 Score=149.97 Aligned_cols=251 Identities=16% Similarity=0.109 Sum_probs=157.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhh-----cCCC---CeeecCCHhHHHhhcCCCcEEE
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQ-----EGNL---PLYGFHDPESFVHSIQKPRVII 74 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~-----~~~~---~~~~~~s~~e~~~~l~~advIi 74 (484)
+|||+|||+|.||..+|..|+++|++|++|+|++ .+.+.+.+.. .+.+ ++..+.+++++.+. +|+||
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~---~DlVi 76 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETK---PDCTL 76 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSC---CSEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCC---CCEEE
Confidence 3699999999999999999999999999999986 3555554310 0000 12334566665534 99999
Q ss_pred EecCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCC------HHhhhcCC-cccc--
Q 011501 75 MLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGG------EEGARYGP-SLMP-- 145 (484)
Q Consensus 75 ~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg------~~~a~~g~-~i~~-- 145 (484)
++||.. +++++++.+.+.+.++++||.+.++... .+.+.+.+... .++.+++..+ ......++ .+.+
T Consensus 77 lavK~~-~~~~~l~~l~~~l~~~t~Iv~~~nGi~~-~~~l~~~~~~~--~vl~g~~~~~a~~~~pg~v~~~~~~~~~ig~ 152 (320)
T 3i83_A 77 LCIKVV-EGADRVGLLRDAVAPDTGIVLISNGIDI-EPEVAAAFPDN--EVISGLAFIGVTRTAPGEIWHQAYGRLMLGN 152 (320)
T ss_dssp ECCCCC-TTCCHHHHHTTSCCTTCEEEEECSSSSC-SHHHHHHSTTS--CEEEEEEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred EecCCC-ChHHHHHHHHhhcCCCCEEEEeCCCCCh-HHHHHHHCCCC--cEEEEEEEeceEEcCCCEEEECCCCEEEEec
Confidence 999997 6788999999999999999998887531 13344444332 3444443321 11112233 3333
Q ss_pred --CCCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHH--------------------HHHHHhHHHHH
Q 011501 146 --GGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGI--------------------EYGDMQLIAEA 203 (484)
Q Consensus 146 --gg~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i--------------------~~~~~~~~~Ea 203 (484)
+.+.+..+.+..+|+.-+-+ +.+..+.-...+.|++-|.. ......++.|+
T Consensus 153 ~~~~~~~~~~~l~~~l~~~~~~-------~~~~~di~~~~w~Kl~~N~~~N~ltal~~~~~g~~~~~~~~~l~~~~~~E~ 225 (320)
T 3i83_A 153 YPGGVSERVKTLAAAFEEAGID-------GIATENITTARWQKCVWNAAFNPLSVLSGGLDTLDILSTQEGFVRAIMQEI 225 (320)
T ss_dssp SSSCCCHHHHHHHHHHHHTTSC-------EEECSCHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHCHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHhCCCC-------ceECHHHHHHHHHHHHHHHhhhHHHHHHCCCHHHHHhCcHHHHHHHHHHHH
Confidence 34556777888888876643 35555567777788877631 22345788999
Q ss_pred HHHHHHhCCCCHH-H-HHHHHHhhccCcchhhhhhhhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCc
Q 011501 204 YDVLKSVGKLSNE-E-LQQVFSEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAA 281 (484)
Q Consensus 204 ~~l~~~~g~~~~~-~-i~~~~~~~~~g~~~s~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~ 281 (484)
..++++.| ++.+ + +..++....... ....++..++...+. -.+|.+.. +.++.|+++|+|+
T Consensus 226 ~~va~a~G-~~l~~~~~~~~~~~~~~~~--~~~sSM~qD~~~gr~-----tEid~i~G---------~vv~~a~~~gv~~ 288 (320)
T 3i83_A 226 RAVAAANG-HPLPEDIVEKNVASTYKMP--PYKTSMLVDFEAGQP-----METEVILG---------NAVRAGRRTRVAI 288 (320)
T ss_dssp HHHHHHTT-CCCCTTHHHHHHHHHHHSC--CCCCHHHHHHHHTCC-----CCHHHHTH---------HHHHHHHHTTCCC
T ss_pred HHHHHHcC-CCCChHHHHHHHHHHhcCC--CCCCcHHHHHHhCCC-----chHHHHcc---------HHHHHHHHhCCCC
Confidence 99999998 7632 1 222221111111 112233344433221 35677655 5789999999999
Q ss_pred chHHH
Q 011501 282 PTIES 286 (484)
Q Consensus 282 p~~~~ 286 (484)
|+...
T Consensus 289 P~~~~ 293 (320)
T 3i83_A 289 PHLES 293 (320)
T ss_dssp HHHHH
T ss_pred CHHHH
Confidence 98764
No 79
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.61 E-value=1.8e-14 Score=143.36 Aligned_cols=256 Identities=13% Similarity=0.152 Sum_probs=156.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhc----CCC---CeeecCCHhHHHhhcCCCcEEEEe
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQE----GNL---PLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~----~~~---~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
|||+|||+|.||..+|..|+++|++|++|+|++ .+.+.+.+... +.. ++..++++++ +.. +|+||++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~---~D~vila 76 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGP---MDLVLVG 76 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCC---CSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCC---CCEEEEe
Confidence 689999999999999999999999999999986 35555443210 000 1223455554 343 9999999
Q ss_pred cCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHc----CCeEEeccCCCCHHhhhcCC-ccccC----C
Q 011501 77 VKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAEL----GLLYLGMGVSGGEEGARYGP-SLMPG----G 147 (484)
Q Consensus 77 vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~----g~~~i~~pv~gg~~~a~~g~-~i~~g----g 147 (484)
||.. +++++++.+.+.+.++++||.+.++.. ..+.+.+.+... ++.++.+-..+.......++ .+.+| .
T Consensus 77 vk~~-~~~~~l~~l~~~l~~~~~iv~l~nGi~-~~~~l~~~~~~~~v~~~~~~~~a~~~~p~~v~~~~~g~~~ig~~~~~ 154 (312)
T 3hn2_A 77 LKTF-ANSRYEELIRPLVEEGTQILTLQNGLG-NEEALATLFGAERIIGGVAFLCSNRGEPGEVHHLGAGRIILGEFLPR 154 (312)
T ss_dssp CCGG-GGGGHHHHHGGGCCTTCEEEECCSSSS-HHHHHHHHTCGGGEEEEEEEEECCBCSSSEEEECEEEEEEEEESSCC
T ss_pred cCCC-CcHHHHHHHHhhcCCCCEEEEecCCCC-cHHHHHHHCCCCcEEEEEEEeeeEEcCCcEEEECCCCeEEEecCCCC
Confidence 9987 788999999999999999999988862 223444444332 22233333333211112223 33333 3
Q ss_pred CHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHH---------------------HHHHHhHHHHHHHH
Q 011501 148 SFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGI---------------------EYGDMQLIAEAYDV 206 (484)
Q Consensus 148 ~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i---------------------~~~~~~~~~Ea~~l 206 (484)
+.+..+.+..+|+.-+-+ +.+..+.-...+-|++-|.. ......++.|+..+
T Consensus 155 ~~~~~~~l~~~l~~~g~~-------~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~~~~~~l~~~~~~E~~~v 227 (312)
T 3hn2_A 155 DTGRIEELAAMFRQAGVD-------CRTTDDLKRARWEKLVWNIPFNGLCALLQQPVNLILARDVSRKLVRGIMLEVIAG 227 (312)
T ss_dssp CSHHHHHHHHHHHHTTCC-------EEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhCCCC-------cEEChHHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhChhHHHHHHHHHHHHHHH
Confidence 456677788888876643 24444455566677766643 33455678899999
Q ss_pred HHHhC---CCCHHHHHHHHHhhccCcchhhhhhhhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcch
Q 011501 207 LKSVG---KLSNEELQQVFSEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPT 283 (484)
Q Consensus 207 ~~~~g---~~~~~~i~~~~~~~~~g~~~s~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~ 283 (484)
+++.| .++.+.+..++....... ....++..++...+. -.+|.+.. +.++.|+++|+|+|+
T Consensus 228 a~a~G~~~~~~~~~~~~~~~~~~~~~--~~~sSM~qD~~~gr~-----tEid~i~G---------~vv~~a~~~gv~~P~ 291 (312)
T 3hn2_A 228 ANAQGLATFIADGYVDDMLEFTDAMG--EYKPSMEIDREEGRP-----LEIAAIFR---------TPLAYGAREGIAMPR 291 (312)
T ss_dssp HHTSCCSSCCCTTHHHHHHHHHTTSC--SCCCHHHHHHHTTCC-----CCHHHHTH---------HHHHHHHHTTCCCHH
T ss_pred HHHcCCccCCCHHHHHHHHHHHhcCC--CCCchHHHHHHhCCC-----ccHHHHhh---------HHHHHHHHhCCCCCH
Confidence 98876 233322333332111111 112233344433221 35676655 578999999999998
Q ss_pred HHHHHHHH
Q 011501 284 IESSLDAR 291 (484)
Q Consensus 284 ~~~av~~r 291 (484)
... ++..
T Consensus 292 ~~~-l~~l 298 (312)
T 3hn2_A 292 VEM-LATL 298 (312)
T ss_dssp HHH-HHHH
T ss_pred HHH-HHHH
Confidence 764 3443
No 80
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.60 E-value=7.9e-16 Score=144.94 Aligned_cols=165 Identities=20% Similarity=0.201 Sum_probs=117.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+|+|+|||+|.||..++..|+++|++|.+|||++++.+.+.+.+ +... +.+++++. +|+||+++|.. .
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g-------~~~~-~~~~~~~~---~DvVi~av~~~-~ 95 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSA-------AQVT-FQEEAVSS---PEVIFVAVFRE-H 95 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTT-------SEEE-EHHHHTTS---CSEEEECSCGG-G
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-------Ccee-cHHHHHhC---CCEEEECCChH-H
Confidence 46899999999999999999999999999999998877664322 3444 67776665 99999999974 5
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCChHHHHH----HHHHHHH--cCCeEEec--cCCCCH--HhhhcCC--ccccCCCHH
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEWYENTER----RQKAVAE--LGLLYLGM--GVSGGE--EGARYGP--SLMPGGSFE 150 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~----~~~~l~~--~g~~~i~~--pv~gg~--~~a~~g~--~i~~gg~~~ 150 (484)
++++++ +.+.+ ++++|||+++..+..+.+ ..+.+.+ .+..++.+ ++++.. ++...|+ .++.|++++
T Consensus 96 ~~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~~~~vv~~~n~~~~~~~~~~~~~g~~~~~~~g~~~~ 173 (215)
T 2vns_A 96 YSSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFPTCTVVKAFNVISAWTLQAGPRDGNRQVPICGDQPE 173 (215)
T ss_dssp SGGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCTTSEEEEECTTBCHHHHHTCSCSSCCEEEEEESCHH
T ss_pred HHHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCCCCeEEeccccccHhHhcccccCCceeEEEecCCHH
Confidence 666665 55556 899999999998654421 1122221 12233321 221111 1122333 567788999
Q ss_pred HHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHH
Q 011501 151 AYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMI 188 (484)
Q Consensus 151 ~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v 188 (484)
.++.++++|+.+|.+ ++++|+.|+|+.++.+
T Consensus 174 ~~~~v~~ll~~~G~~-------~~~~g~~~~~~~~e~~ 204 (215)
T 2vns_A 174 AKRAVSEMALAMGFM-------PVDMGSLASAWEVEAM 204 (215)
T ss_dssp HHHHHHHHHHHTTCE-------EEECCSGGGHHHHHHS
T ss_pred HHHHHHHHHHHcCCc-------eEeecchhhhhHhhhh
Confidence 999999999999976 5999999999988754
No 81
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.58 E-value=1.5e-15 Score=142.31 Aligned_cols=151 Identities=17% Similarity=0.195 Sum_probs=112.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++|+|||+|.||..+|..|+++|++|++|||+++ .++. +|+||+++|+ ..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~-------------------------~~~~---aD~vi~av~~-~~ 69 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ-------------------------ATTL---GEIVIMAVPY-PA 69 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC-------------------------CSSC---CSEEEECSCH-HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH-------------------------Hhcc---CCEEEEcCCc-HH
Confidence 47899999999999999999999999999998854 1123 8999999994 58
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCCh-H--------H----HHHHHHHHHHcCCeEEec-cCCCCHHhhh---cC--C-c
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEWY-E--------N----TERRQKAVAELGLLYLGM-GVSGGEEGAR---YG--P-S 142 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~~-~--------~----~~~~~~~l~~~g~~~i~~-pv~gg~~~a~---~g--~-~ 142 (484)
++++++++.+.++ +++||++++..+ . . ++.+.+.+. +..++.+ ....++..+. .+ + .
T Consensus 70 ~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~--~~~vv~~~~~~~~p~~~~~~~~g~~~~~ 146 (209)
T 2raf_A 70 LAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP--DSQVLKAFNTTFAATLQSGQVNGKEPTT 146 (209)
T ss_dssp HHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT--TSEEEECSTTSCHHHHHHSEETTTEECE
T ss_pred HHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC--CCcEEEeeecccHhhccccccCCCCCce
Confidence 8899999988887 999999998553 1 1 344444332 4667772 2222222221 23 3 4
Q ss_pred cccCC-CHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHH
Q 011501 143 LMPGG-SFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGI 192 (484)
Q Consensus 143 i~~gg-~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i 192 (484)
++++| +++..+.++++|+.++.+ ++++++.+.+..+|++.|.+
T Consensus 147 ~~~~g~~~~~~~~v~~ll~~~G~~-------~~~~~~i~~a~~~K~i~~l~ 190 (209)
T 2raf_A 147 VLVAGNDDSAKQRFTRALADSPLE-------VKDAGKLKRARELEAMGFMQ 190 (209)
T ss_dssp EEEEESCHHHHHHHHHHTTTSSCE-------EEEEESGGGHHHHHHHHHHH
T ss_pred eEEcCCCHHHHHHHHHHHHHcCCc-------eEeCCCHhHHHHhcchHHHH
Confidence 55555 568899999999999865 48999999999999998754
No 82
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.58 E-value=2.7e-14 Score=141.48 Aligned_cols=193 Identities=17% Similarity=0.211 Sum_probs=135.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhh-------hcC----CC-------CeeecCCHhHHHh
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK-------QEG----NL-------PLYGFHDPESFVH 65 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~-------~~~----~~-------~~~~~~s~~e~~~ 65 (484)
.||+|||+|.||.++|..++.+|++|.+||++++.++...+... ..+ .. ++..++++++.++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~~ 86 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAVE 86 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHTT
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHhc
Confidence 58999999999999999999999999999999987654432211 111 00 3566778888777
Q ss_pred hcCCCcEEEEecCCCchHH-HHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHc----CCeEEecc-CCCCHHhhhc
Q 011501 66 SIQKPRVIIMLVKAGSPVD-QTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAEL----GLLYLGMG-VSGGEEGARY 139 (484)
Q Consensus 66 ~l~~advIi~~vp~~~~v~-~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~----g~~~i~~p-v~gg~~~a~~ 139 (484)
. +|+|+.+||....++ +++.+|.+.++++.|+-..|++.+.+ ++++.+... |.||+..| ++.-.+
T Consensus 87 ~---ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is--~ia~~~~~p~r~ig~HffNP~~~m~LVE---- 157 (319)
T 3ado_A 87 G---VVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPS--KLFTGLAHVKQCIVAHPVNPPYYIPLVE---- 157 (319)
T ss_dssp T---EEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHH--HHHTTCTTGGGEEEEEECSSTTTCCEEE----
T ss_pred c---CcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccch--hhhhhccCCCcEEEecCCCCccccchHH----
Confidence 6 999999999998877 55588888888887776655554432 333333221 56666554 221111
Q ss_pred CCccccC--CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHH
Q 011501 140 GPSLMPG--GSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEE 217 (484)
Q Consensus 140 g~~i~~g--g~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~ 217 (484)
++.| .++++++.+..+++.+++++ +.+-.+..| ++.|.+. ..++.|++.+....+ .++++
T Consensus 158 ---iv~g~~Ts~~~~~~~~~~~~~~gk~p-------v~v~kd~pG----Fi~NRl~---~~~~~EA~~lv~eGv-as~ed 219 (319)
T 3ado_A 158 ---LVPHPETSPATVDRTHALMRKIGQSP-------VRVLKEIDG----FVLNRLQ---YAIISEAWRLVEEGI-VSPSD 219 (319)
T ss_dssp ---EEECTTCCHHHHHHHHHHHHHTTCEE-------EECSSCCTT----TTHHHHH---HHHHHHHHHHHHTTS-SCHHH
T ss_pred ---hcCCCCCcHHHHHHHHHHHHHhCCcc-------CCcCCCCCC----EeHHHHH---HHHHHHHHHHHHhCC-CCHHH
Confidence 3444 38999999999999999764 444333445 4456554 355699999999887 99999
Q ss_pred HHHHHH
Q 011501 218 LQQVFS 223 (484)
Q Consensus 218 i~~~~~ 223 (484)
+..++.
T Consensus 220 ID~~~~ 225 (319)
T 3ado_A 220 LDLVMS 225 (319)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998873
No 83
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=99.56 E-value=2.4e-15 Score=152.68 Aligned_cols=280 Identities=11% Similarity=-0.007 Sum_probs=172.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC--------cEEEEeCChhH-----HHHHHHHhhhcC---CC----CeeecCCHhHH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF--------PISVYNRTTSK-----VDETVERAKQEG---NL----PLYGFHDPESF 63 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~--------~V~v~dr~~~~-----~~~~~~~~~~~~---~~----~~~~~~s~~e~ 63 (484)
.||+|||.|.||++||..|+++|+ +|.+|.|+++. .+.+...+.+.. +. ++..+++++++
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~a 114 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDS 114 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHH
Confidence 389999999999999999999875 49999988753 333333322210 00 57788899998
Q ss_pred HhhcCCCcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHH---HHHHHHHHH-cCC--eEEeccCCCCHHhh
Q 011501 64 VHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENT---ERRQKAVAE-LGL--LYLGMGVSGGEEGA 137 (484)
Q Consensus 64 ~~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~---~~~~~~l~~-~g~--~~i~~pv~gg~~~a 137 (484)
++. +|+||++||.. .++++++++.++++++.++|.++.+.-..+ +.+.+.+.+ .+. .++..|-+. .+-+
T Consensus 115 l~~---ad~ii~avPs~-~~r~~l~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~~~~~~~vLsGPs~A-~EVa 189 (391)
T 4fgw_A 115 VKD---VDIIVFNIPHQ-FLPRICSQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEELGIQCGALSGANIA-TEVA 189 (391)
T ss_dssp HTT---CSEEEECSCGG-GHHHHHHHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHHHCCEEEEEECSCCH-HHHH
T ss_pred Hhc---CCEEEEECChh-hhHHHHHHhccccCCCceeEEeccccccccccchhHHHHHHHHhCccceeccCCchH-HHhh
Confidence 887 99999999986 899999999999999999999987753212 122333322 233 334445442 3445
Q ss_pred hcCC-ccccCC-CH---------HHHHHHHHHHHH-----------HhccCCCCCCceEEeCCchhHHHHHHHHHHHHHH
Q 011501 138 RYGP-SLMPGG-SF---------EAYKHIEDILLK-----------VAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYG 195 (484)
Q Consensus 138 ~~g~-~i~~gg-~~---------~~~~~v~~ll~~-----------i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~ 195 (484)
+.-| .+.++. ++ ...+.++.+|.. +|.++....|+++-++ .|....+++-.|...+.
T Consensus 190 ~~~pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~~frvy~s~DviGvElgGAlKNViAIA-aGi~dGlg~G~NakAAL 268 (391)
T 4fgw_A 190 QEHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPYFHVSVIEDVAGISICGALKNVVALG-CGFVEGLGWGNNASAAI 268 (391)
T ss_dssp TTCCEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHH-HHHHHHTTCHHHHHHHH
T ss_pred cCCCceEEEEecChhhhhhhhHHHHHHHHHHHhCCCCEEEEEeCCccceehHHHHHHHHHHH-HHHHhcCCCCCCHHHHH
Confidence 5555 443332 21 223456666621 1211111225555554 36666777889999999
Q ss_pred HHhHHHHHHHHHHHh--CCCCHHHHHHHHHhhccCcchhhhhhhhccccccccCCC-CchhHHHhhhhc--CCCCchHHH
Q 011501 196 DMQLIAEAYDVLKSV--GKLSNEELQQVFSEWNKGELLSFLIEITADIFGIKDDKG-DGYLVDKVLDKT--GMKGTGKWT 270 (484)
Q Consensus 196 ~~~~~~Ea~~l~~~~--g~~~~~~i~~~~~~~~~g~~~s~l~~~~~~~l~~~~~~~-~~~~l~~i~~~~--~~k~tg~~~ 270 (484)
+...++|+..++.+. ||-++..+... .|-++-.+.-..++..+.+..+. .+..++.+.+.+ +|+.+|..+
T Consensus 269 itrGl~Em~rlg~al~~~g~~~tt~~gl-----aGlGDLi~Tc~sSRNr~~G~~lg~~G~~~~~~~~~~~~g~v~EGv~t 343 (391)
T 4fgw_A 269 QRVGLGEIIRFGQMFFPESREETYYQES-----AGVADLITTCAGGRNVKVARLMATSGKDAWECEKELLNGQSAQGLIT 343 (391)
T ss_dssp HHHHHHHHHHHHHHHSTTCCHHHHHHST-----TTHHHHHHHHHSSHHHHHHHHHHHTCCCHHHHHHHHHTTCCCTHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCceeecCC-----CcccceeEEecCCccHHHHHHHHhcCCCHHHHHHHHhCCCEEehHHH
Confidence 999999999999987 32443333211 12222111111111111111111 234566666665 788999887
Q ss_pred HH----HHHHcCC--CcchHHHHHHHHHHhc
Q 011501 271 VQ----QAADLSV--AAPTIESSLDARFLSG 295 (484)
Q Consensus 271 ~~----~A~~~gv--p~p~~~~av~~r~~s~ 295 (484)
+. .++++|+ .+|++. +|++-+...
T Consensus 344 a~~v~~l~~~~~v~~emPI~~-~vy~IL~~~ 373 (391)
T 4fgw_A 344 CKEVHEWLETCGSVEDFPLFE-AVYQIVYNN 373 (391)
T ss_dssp HHHHHHHHHHHTCSTTCHHHH-HHHHHHHSC
T ss_pred HHHHHHHHHHcCCCCCCCHHH-HHHHHHhCC
Confidence 75 4678899 899765 567766654
No 84
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.55 E-value=5.2e-15 Score=154.77 Aligned_cols=119 Identities=8% Similarity=0.145 Sum_probs=100.9
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHH---HcCCCccchhhHHHHHHHHccCCCCCCc
Q 011501 320 TVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRI---WKGGCIIRAIFLDRIKKAYDRNPDLANV 396 (484)
Q Consensus 320 ~~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~i---W~~Gcii~s~ll~~i~~~~~~~~~~~~l 396 (484)
+.+++|++||+||+++|++|+.++|+|.++++ ..++|..+++++ |+.| .++|++++...+++.+++.....
T Consensus 177 ~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~-----~~Gld~~~l~~v~~~w~~G-~~~S~l~e~~~~~l~~~D~~g~~ 250 (484)
T 4gwg_A 177 DEGAGHFVKMVHNGIEYGDMQLICEAYHLMKD-----VLGMAQDEMAQAFEDWNKT-ELDSFLIEITANILKFQDTDGKH 250 (484)
T ss_dssp ETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TSCCCHHHHHHHHHHHTTT-TTCBHHHHHHHHHHHCBCTTSSB
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCCHHHHHHHHHHHcCC-CccchHHHHHHHHHhcCCccCCc
Confidence 35899999999999999999999999999986 245887666555 9999 78999999999999864433557
Q ss_pred ccchhHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHH--HHHhhcCCCcc
Q 011501 397 LVDPEFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLA--YFDTYRRERLP 446 (484)
Q Consensus 397 l~~~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~--~~~~~~~~~~~ 446 (484)
++|.+.+...+|++| ||+++.|+++|+|+|+|++||+ ++++++.+|..
T Consensus 251 ~ld~i~d~~~~kgtG--~wt~~~A~~~gvp~p~i~~av~~R~~S~~k~~r~~ 300 (484)
T 4gwg_A 251 LLPKIRDSAGQKGTG--KWTAISALEYGVPVTLIGEAVFARCLSSLKDERIQ 300 (484)
T ss_dssp SGGGSCCCCCSSCTT--HHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHHHH
T ss_pred cHHHHhccccCcchH--HHHHHHHHHcCCCchHHHHHHHHHHHhhchHHHHH
Confidence 888888888889999 9999999999999999999997 77777766543
No 85
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.51 E-value=8.8e-14 Score=131.41 Aligned_cols=155 Identities=10% Similarity=0.109 Sum_probs=114.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
.|||+|||+|.||.+||.+|.++|++|.+||+.. + +.. +| |+|||+. .
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~~-------------------------~-~~~---aD--ilavP~~-a 53 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAPE-------------------------D-IRD---FE--LVVIDAH-G 53 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSGG-------------------------G-GGG---CS--EEEECSS-C
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCHH-------------------------H-hcc---CC--EEEEcHH-H
Confidence 4799999999999999999999999999999830 1 233 89 9999997 8
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe-ccCCCCHHhhhcCCccccCCCHHHHHHHHHHHHH
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG-MGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLK 161 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~-~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll~~ 161 (484)
+.+++.++.+.+.+|++|+|+|++..... .+.+...|..|++ .|+.|.. .++.++++++++.++++++.
T Consensus 54 i~~vl~~l~~~l~~g~ivvd~sgs~~~~v---l~~~~~~g~~fvg~HPm~g~~-------~~i~a~d~~a~~~l~~L~~~ 123 (232)
T 3dfu_A 54 VEGYVEKLSAFARRGQMFLHTSLTHGITV---MDPLETSGGIVMSAHPIGQDR-------WVASALDELGETIVGLLVGE 123 (232)
T ss_dssp HHHHHHHHHTTCCTTCEEEECCSSCCGGG---GHHHHHTTCEEEEEEEEETTE-------EEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEEEEECCcCHHHH---HHHHHhCCCcEEEeeeCCCCc-------eeeeCCCHHHHHHHHHHHHH
Confidence 99999999999999999999876654433 3334467899996 5886542 34455688899999999999
Q ss_pred HhccCCCCCCceEEeCCchhHHH-HHHHHHHHHHHHHhHHHHHHHHHHH
Q 011501 162 VAAQVPDSGPCVTYVGKGGSGNF-VKMIHNGIEYGDMQLIAEAYDVLKS 209 (484)
Q Consensus 162 i~~~~~~~~~~~~~~G~~g~g~~-~K~v~N~i~~~~~~~~~Ea~~l~~~ 209 (484)
+|+++ +++++...-.+ .-.+|+ .-...++.++..+++.
T Consensus 124 lG~~v-------v~~~~~~hd~~~AAvsh~---nhLv~L~~~A~~ll~~ 162 (232)
T 3dfu_A 124 LGGSI-------VEIADDKRAQLAAALTYA---GFLSTLQRDASYFLDE 162 (232)
T ss_dssp TTCEE-------CCCCGGGHHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred hCCEE-------EEeCHHHHhHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 99874 77876433322 222332 2234556666666643
No 86
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.47 E-value=2.9e-13 Score=136.13 Aligned_cols=193 Identities=15% Similarity=0.100 Sum_probs=126.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
.++|+|||+|.||.++|.+|.+.|++|++|||++++..+..... ++..+ +++++++. +|+||++||+. .
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~------G~~~~-~~~e~~~~---aDvVilavp~~-~ 84 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAH------GLKVA-DVKTAVAA---ADVVMILTPDE-F 84 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHT------TCEEE-CHHHHHHT---CSEEEECSCHH-H
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHC------CCEEc-cHHHHHhc---CCEEEEeCCcH-H
Confidence 36899999999999999999999999999999987633332221 24455 88888877 99999999987 5
Q ss_pred HHHHHH-HHhhhcCCCCEEEecCCCChHHHHHHHHHHH-HcCCeEEec-cCCCCHHh---hh---cCC-cc-cc--CCCH
Q 011501 83 VDQTIK-TLSVYMEKGDCIIDGGNEWYENTERRQKAVA-ELGLLYLGM-GVSGGEEG---AR---YGP-SL-MP--GGSF 149 (484)
Q Consensus 83 v~~vl~-~l~~~l~~g~iiId~st~~~~~~~~~~~~l~-~~g~~~i~~-pv~gg~~~---a~---~g~-~i-~~--gg~~ 149 (484)
..+++. ++.+.++++.+|+|+++.. . .+ ..+. ..++.++.. | +|.... .. .|. .+ .+ +.++
T Consensus 85 ~~~v~~~~i~~~l~~~~ivi~~~gv~---~-~~-~~~~~~~~~~vv~~~P-~gp~~a~~~l~~~G~g~~~ii~~~~~~~~ 158 (338)
T 1np3_A 85 QGRLYKEEIEPNLKKGATLAFAHGFS---I-HY-NQVVPRADLDVIMIAP-KAPGHTVRSEFVKGGGIPDLIAIYQDASG 158 (338)
T ss_dssp HHHHHHHHTGGGCCTTCEEEESCCHH---H-HT-TSSCCCTTCEEEEEEE-SSCSHHHHHHHHTTCCCCEEEEEEECSSS
T ss_pred HHHHHHHHHHhhCCCCCEEEEcCCch---h-HH-HhhcCCCCcEEEeccC-CCCchhHHHHHhccCCCeEEEEecCCCCH
Confidence 688888 9999999999999986432 1 22 2222 345666654 5 433221 11 254 43 33 3467
Q ss_pred HHHHHHHHHHHHHhc-cCCCCCCceEEeCCchhHHHHHHHHH-HHHHHHHhHHHHHHHHHHHhCCCCHHHH
Q 011501 150 EAYKHIEDILLKVAA-QVPDSGPCVTYVGKGGSGNFVKMIHN-GIEYGDMQLIAEAYDVLKSVGKLSNEEL 218 (484)
Q Consensus 150 ~~~~~v~~ll~~i~~-~~~~~~~~~~~~G~~g~g~~~K~v~N-~i~~~~~~~~~Ea~~l~~~~g~~~~~~i 218 (484)
++.+.++.+++.+|. +. .++.+....-.....++.+ .+..+...+++.++..+.+.| +++++.
T Consensus 159 ~a~~~~~~l~~~lG~~~a-----gv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~G-l~~~~a 223 (338)
T 1np3_A 159 NAKNVALSYACGVGGGRT-----GIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAG-YAPEMA 223 (338)
T ss_dssp CHHHHHHHHHHHTTHHHH-----CEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTT-CCHHHH
T ss_pred HHHHHHHHHHHHcCCCcc-----ceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcC-CCHHHH
Confidence 788999999999996 30 0245543222223334333 333334455566666666788 998765
No 87
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.46 E-value=1.5e-14 Score=142.61 Aligned_cols=246 Identities=13% Similarity=0.143 Sum_probs=146.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHH-hhcCCCcEEEEecCCCc
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFV-HSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~-~~l~~advIi~~vp~~~ 81 (484)
+|||+|||+|.||..+|..|+++|++|++|+|+++.++.....+ ........++.+.+ . .+|+||++||..
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g----~~~~~~~~~~~~~~~~---~~D~vilavk~~- 73 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPH----APAQDIVVKGYEDVTN---TFDVIIIAVKTH- 73 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTT----SCCEEEEEEEGGGCCS---CEEEEEECSCGG-
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCC----eeccceecCchHhcCC---CCCEEEEeCCcc-
Confidence 36999999999999999999999999999999976432111001 00112222333332 3 389999999987
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHc----CCeEEeccCCCCHHhhhcCC-ccccCCCHHHHHHHH
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAEL----GLLYLGMGVSGGEEGARYGP-SLMPGGSFEAYKHIE 156 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~----g~~~i~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~ 156 (484)
+++++++.+.+.+.++++||.+.++...... +... |+.++.+-..|. ..+..++ .+.. ++.+..+.+.
T Consensus 74 ~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~-----~~~~~v~~g~~~~~a~~~~p-g~v~~~~~~~~~-~~~~~~~~l~ 146 (294)
T 3g17_A 74 QLDAVIPHLTYLAHEDTLIILAQNGYGQLEH-----IPFKNVCQAVVYISGQKKGD-VVTHFRDYQLRI-QDNALTRQFR 146 (294)
T ss_dssp GHHHHGGGHHHHEEEEEEEEECCSSCCCGGG-----CCCSCEEECEEEEEEEEETT-EEEEEEEEEEEE-ECSHHHHHHH
T ss_pred CHHHHHHHHHHhhCCCCEEEEeccCcccHhh-----CCCCcEEEEEEEEEEEEcCC-CEEEECCCEEec-CccHHHHHHH
Confidence 8999999999999888899998887643221 2111 222222212211 1111222 2333 3444556666
Q ss_pred HHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHH--------------------HHHHHhHHHHHHHHHHHhCCCC--
Q 011501 157 DILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGI--------------------EYGDMQLIAEAYDVLKSVGKLS-- 214 (484)
Q Consensus 157 ~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i--------------------~~~~~~~~~Ea~~l~~~~g~~~-- 214 (484)
.+|+.-+-+ +.+..+.-...+-|++-|.. ......++.|+.+++++.| ++
T Consensus 147 ~~l~~~~~~-------~~~~~di~~~~w~Kl~~N~~inl~al~~~~~g~~l~~~~~~~l~~~~~~E~~~va~a~G-~~l~ 218 (294)
T 3g17_A 147 DLVQDSQID-------IVLEANIQQAIWYKLLVNLGINSITALGRQTVAIMHNPEIRILCRQLLLDGCRVAQAEG-LNFS 218 (294)
T ss_dssp HHTTTSSCE-------EEEESSHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSHHHHHHHHHHHHHHHHHHHHTT-CCCC
T ss_pred HHHHhCCCc-------eEEChHHHHHHHHHHHHHHHHHHHHHHCCChHHHHcCHHHHHHHHHHHHHHHHHHHHcC-CCCC
Confidence 666543322 34445566667778777752 2334568899999999998 65
Q ss_pred HHHHHHHHHhhccCcchhhhhhhhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHH
Q 011501 215 NEELQQVFSEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIES 286 (484)
Q Consensus 215 ~~~i~~~~~~~~~g~~~s~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~ 286 (484)
++.+.+.+........ ....++..++...+. ..+|.+.. +.++.|+++|+|+|+...
T Consensus 219 ~~~~~~~~~~~~~~~~-~~~sSM~qD~~~gr~-----tEid~i~G---------~vv~~a~~~gv~~P~~~~ 275 (294)
T 3g17_A 219 EQTVDTIMTIYQGYPD-EMGTSMYYDIVHQQP-----LEVEAIQG---------FIYRRAREHNLDTPYLDT 275 (294)
T ss_dssp HHHHHHHHHHHHTSCT-TCCCHHHHHHHTTCC-----CSGGGTHH---------HHHHHHHHTTCCCHHHHH
T ss_pred HHHHHHHHHHHhhcCC-CCCCcHHHHHHcCCC-----ccHHHhhh---------HHHHHHHHhCCCCChHHH
Confidence 4444444432221111 112233444433221 24555544 578999999999998764
No 88
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.40 E-value=3.9e-13 Score=133.33 Aligned_cols=92 Identities=15% Similarity=0.154 Sum_probs=71.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCC---------H-hHHHhhcCCCcE
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHD---------P-ESFVHSIQKPRV 72 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s---------~-~e~~~~l~~adv 72 (484)
+|||+|||+|.||..+|..|+ +|++|++|+|++++.+.+.+.+. ....+ . .+.. ..+|+
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~-------~~~~~~~~~~~~~~~~~~~~---~~~D~ 70 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGI-------RLYKGGEEFRADCSADTSIN---SDFDL 70 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCE-------EEEETTEEEEECCEEESSCC---SCCSE
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCc-------eEecCCCeeccccccccccc---CCCCE
Confidence 469999999999999999999 99999999999988888876532 21110 0 1222 34999
Q ss_pred EEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCCh
Q 011501 73 IIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWY 108 (484)
Q Consensus 73 Ii~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~ 108 (484)
||++||.. +++++++.+.+. .++. ||...|+..
T Consensus 71 vilavK~~-~~~~~l~~l~~~-~~~~-ivs~~nGi~ 103 (307)
T 3ego_A 71 LVVTVKQH-QLQSVFSSLERI-GKTN-ILFLQNGMG 103 (307)
T ss_dssp EEECCCGG-GHHHHHHHTTSS-CCCE-EEECCSSSH
T ss_pred EEEEeCHH-HHHHHHHHhhcC-CCCe-EEEecCCcc
Confidence 99999986 789999888774 4555 888888863
No 89
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=99.35 E-value=2e-14 Score=143.04 Aligned_cols=135 Identities=14% Similarity=0.180 Sum_probs=103.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC-CC-cEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEK-GF-PISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAG 80 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~-G~-~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 80 (484)
.++|+|||+|.||..++.+|++. |+ +|.+|||++++.+++.+.... .+..+.+++++++. +|+|++|+|..
T Consensus 135 ~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~----~~~~~~~~~e~v~~---aDiVi~atp~~ 207 (312)
T 2i99_A 135 SEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQG----EVRVCSSVQEAVAG---ADVIITVTLAT 207 (312)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSS----CCEECSSHHHHHTT---CSEEEECCCCS
T ss_pred CcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhC----CeEEeCCHHHHHhc---CCEEEEEeCCC
Confidence 36899999999999999999886 76 899999999999988765321 15667899998887 99999999964
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe----ccCCCCH----HhhhcCC-ccccCCCHH
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG----MGVSGGE----EGARYGP-SLMPGGSFE 150 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~----~pv~gg~----~~a~~g~-~i~~gg~~~ 150 (484)
. .++.. +.+++|++|+++++..|.. .++.+.+.++|..|+| +|+..|+ .++..|+ ..|++|+.+
T Consensus 208 ~---~v~~~--~~l~~g~~vi~~g~~~p~~-~el~~~~~~~g~~~vD~~~~a~~~~G~~~~~~~~~~g~L~~~v~G~~~ 280 (312)
T 2i99_A 208 E---PILFG--EWVKPGAHINAVGASRPDW-RELDDELMKEAVLYVDSQEAALKESGDVLLSGAEIFAELGEVIKGVKP 280 (312)
T ss_dssp S---CCBCG--GGSCTTCEEEECCCCSTTC-CSBCHHHHHHSEEEESCHHHHHHHCHHHHTTTCCCCEEHHHHHHTSSC
T ss_pred C---cccCH--HHcCCCcEEEeCCCCCCCc-eeccHHHHhcCEEEECCHHHHHhhcCCcccChhhccccHHHHhCCCCC
Confidence 2 33322 5688999999999888864 6667777788999999 6773443 3344555 667777643
No 90
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.30 E-value=2.7e-12 Score=125.70 Aligned_cols=117 Identities=12% Similarity=0.120 Sum_probs=101.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|++|...|++|++|||++++.+. .....+++++++. +|+|++++|....+
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------------~~~~~~l~ell~~---aDiV~l~~P~t~~t 187 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV------------DVISESPADLFRQ---SDFVLIAIPLTDKT 187 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC------------SEECSSHHHHHHH---CSEEEECCCCCTTT
T ss_pred chheeeccCchhHHHHHHHHhhCcEEEEEecccccccc------------ccccCChHHHhhc---cCeEEEEeeccccc
Confidence 68999999999999999999999999999999764321 2456799999988 99999999987777
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHH
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEE 135 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~ 135 (484)
+.++ .+.++.+++|.++||++++.+.+...+.+.+.+.++......|+..++
T Consensus 188 ~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP 240 (290)
T 3gvx_A 188 RGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEP 240 (290)
T ss_dssp TTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTT
T ss_pred hhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCc
Confidence 7776 677888999999999999999999999999998888887777777664
No 91
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.30 E-value=2.7e-11 Score=132.77 Aligned_cols=193 Identities=16% Similarity=0.252 Sum_probs=132.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhh-----------hcC----CCCeeecCCHhHHHhhc
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK-----------QEG----NLPLYGFHDPESFVHSI 67 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~-----------~~~----~~~~~~~~s~~e~~~~l 67 (484)
..+|||||.|.||..+|..++.+|++|+++|++++.++...+... ... ...+...++.+++..
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-- 393 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELST-- 393 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGGGS--
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHHhh--
Confidence 468999999999999999999999999999999987654432110 000 003556667666443
Q ss_pred CCCcEEEEecCCCchHH-HHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHH--c--CCeEEecc-CCCCHHhhhcCC
Q 011501 68 QKPRVIIMLVKAGSPVD-QTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAE--L--GLLYLGMG-VSGGEEGARYGP 141 (484)
Q Consensus 68 ~~advIi~~vp~~~~v~-~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~--~--g~~~i~~p-v~gg~~~a~~g~ 141 (484)
+|+||.+||....++ +++.++.+.++++.|+...|++.+.+. +++.+.. + |.||+..| ++.-.
T Consensus 394 --aDlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSsl~i~~--ia~~~~~p~r~ig~HFfnP~~~m~LV------- 462 (742)
T 3zwc_A 394 --VDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDD--IASSTDRPQLVIGTHFFSPAHVMRLL------- 462 (742)
T ss_dssp --CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHH--HHTTSSCGGGEEEEECCSSTTTCCEE-------
T ss_pred --CCEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCcCChHH--HHhhcCCccccccccccCCCCCCceE-------
Confidence 999999999998877 555888888888888776665554332 3333221 1 45555432 11111
Q ss_pred ccccC--CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHH
Q 011501 142 SLMPG--GSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQ 219 (484)
Q Consensus 142 ~i~~g--g~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~ 219 (484)
=|+.| .++++++.+..+.+.+++.+ +.+.+ ..|. +.|.+. ...+.|++.++.. | .+++++.
T Consensus 463 Evi~g~~Ts~e~~~~~~~~~~~lgK~p-------V~vkd-~pGF----i~NRi~---~~~~~ea~~l~~e-G-~~~~~id 525 (742)
T 3zwc_A 463 EVIPSRYSSPTTIATVMSLSKKIGKIG-------VVVGN-CYGF----VGNRML---APYYNQGFFLLEE-G-SKPEDVD 525 (742)
T ss_dssp EEEECSSCCHHHHHHHHHHHHHTTCEE-------EECCC-STTT----THHHHH---HHHHHHHHHHHHT-T-CCHHHHH
T ss_pred EEecCCCCCHHHHHHHHHHHHHhCCCC-------cccCC-CCCc----cHHHHh---hHHHHHHHHHHHc-C-CCHHHHH
Confidence 13444 38999999999999999753 66654 4554 445543 4556999999876 6 8999999
Q ss_pred HHHHhh
Q 011501 220 QVFSEW 225 (484)
Q Consensus 220 ~~~~~~ 225 (484)
+++..+
T Consensus 526 ~a~~~~ 531 (742)
T 3zwc_A 526 GVLEEF 531 (742)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 887654
No 92
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.28 E-value=1.7e-11 Score=122.76 Aligned_cols=111 Identities=15% Similarity=0.169 Sum_probs=91.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|+.|...|++|++|||++++.+.+.+. ++... +++++++. +|+|++++|....+
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~-------g~~~~-~l~e~l~~---aDvVi~~vp~~~~t 224 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEF-------QAEFV-STPELAAQ---SDFIVVACSLTPAT 224 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTT-------TCEEC-CHHHHHHH---CSEEEECCCCCTTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhc-------CceeC-CHHHHHhh---CCEEEEeCCCChHH
Confidence 689999999999999999999999999999988765544321 24444 88888887 99999999988777
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeE
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLY 125 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~ 125 (484)
+.++ .++.+.+++|.++|++|++.+.+...+.+.+.+.++..
T Consensus 225 ~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~g 267 (330)
T 2gcg_A 225 EGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAA 267 (330)
T ss_dssp TTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSE
T ss_pred HHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccE
Confidence 7666 56778899999999999999888888888888765543
No 93
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.27 E-value=5.3e-11 Score=122.43 Aligned_cols=99 Identities=14% Similarity=0.188 Sum_probs=76.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHh-CCCcEEEEe---CChhHHHHHHHHhh------hcCC--C----Cee-ecCCHhHHHh
Q 011501 3 QTRIGLAGLAVMGQNLALNIAE-KGFPISVYN---RTTSKVDETVERAK------QEGN--L----PLY-GFHDPESFVH 65 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~-~G~~V~v~d---r~~~~~~~~~~~~~------~~~~--~----~~~-~~~s~~e~~~ 65 (484)
+|||+|||+|.||..+|..|++ +|++|++|+ |++++++.+.+... ..++ . .+. .++++++++.
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 81 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAIS 81 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHT
T ss_pred CceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhC
Confidence 3699999999999999999998 599999999 88777776443221 0000 0 122 5567877777
Q ss_pred hcCCCcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCC
Q 011501 66 SIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 66 ~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st 105 (484)
. +|+||++||+. ..+++++++.+.+.++++|++..+
T Consensus 82 ~---aD~Vilav~~~-~~~~v~~~l~~~l~~~~ivv~~~~ 117 (404)
T 3c7a_A 82 G---ADVVILTVPAF-AHEGYFQAMAPYVQDSALIVGLPS 117 (404)
T ss_dssp T---CSEEEECSCGG-GHHHHHHHHTTTCCTTCEEEETTC
T ss_pred C---CCEEEEeCchH-HHHHHHHHHHhhCCCCcEEEEcCC
Confidence 6 99999999997 689999999999999999998533
No 94
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.26 E-value=3.3e-11 Score=120.79 Aligned_cols=120 Identities=21% Similarity=0.186 Sum_probs=96.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
.++|||||+|.||..+|+.|...|++|++|||++++ +.....+ +.. .+++++++. +|+|++++|....
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g-------~~~-~~l~~~l~~---aDvVil~vp~~~~ 217 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELN-------AEF-KPLEDLLRE---SDFVVLAVPLTRE 217 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHC-------CEE-CCHHHHHHH---CSEEEECCCCCTT
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcC-------ccc-CCHHHHHhh---CCEEEECCCCChH
Confidence 368999999999999999999999999999999876 4333221 333 488888887 9999999999876
Q ss_pred HHHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCH
Q 011501 83 VDQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGE 134 (484)
Q Consensus 83 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~ 134 (484)
++.++ .++.+.++++.++|++|++.+.+...+.+.+.+..+.....-+++.+
T Consensus 218 t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~E 270 (334)
T 2dbq_A 218 TYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEE 270 (334)
T ss_dssp TTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSS
T ss_pred HHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCCC
Confidence 77777 46778899999999999999888888888888766655444455433
No 95
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.26 E-value=2.8e-11 Score=121.91 Aligned_cols=121 Identities=15% Similarity=0.166 Sum_probs=97.6
Q ss_pred CeEEEEcccHHHHHHHHHHH-hCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAVMGQNLALNIA-EKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~-~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
++|||||+|.||..+|+.+. ..|++|++|||++++.+...+.+ +..+.+++++++. +|+|++++|....
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g-------~~~~~~l~ell~~---aDvVil~vp~~~~ 233 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALG-------AERVDSLEELARR---SDCVSVSVPYMKL 233 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHT-------CEECSSHHHHHHH---CSEEEECCCCSGG
T ss_pred CEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcC-------cEEeCCHHHHhcc---CCEEEEeCCCChH
Confidence 58999999999999999999 99999999999987655443322 4455688898887 9999999999877
Q ss_pred HHHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCH
Q 011501 83 VDQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGE 134 (484)
Q Consensus 83 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~ 134 (484)
++.++ .++.+.+++|.+|||++++.+.+...+.+.+.+..+......+++.+
T Consensus 234 t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~E 286 (348)
T 2w2k_A 234 THHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFE 286 (348)
T ss_dssp GTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTT
T ss_pred HHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCC
Confidence 77776 46777899999999999999888888888887755544445565544
No 96
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.23 E-value=1.5e-11 Score=123.73 Aligned_cols=121 Identities=16% Similarity=0.092 Sum_probs=100.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|++|...|++|.+|||++...+.+.+.+ +..+.+++++++. +|+|++++|....+
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~~~~l~ell~~---aDvV~l~~Plt~~t 234 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETG-------AKFVEDLNEMLPK---CDVIVINMPLTEKT 234 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHC-------CEECSCHHHHGGG---CSEEEECSCCCTTT
T ss_pred CEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCC-------CeEcCCHHHHHhc---CCEEEECCCCCHHH
Confidence 6899999999999999999999999999999875554444332 4566799999988 99999999987777
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCH
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGE 134 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~ 134 (484)
+.++ .+.+..+++|.++||++++.+.+...+.+.+.+..+......|+..+
T Consensus 235 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~E 286 (351)
T 3jtm_A 235 RGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQ 286 (351)
T ss_dssp TTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSS
T ss_pred HHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCccEEEeCCCCCC
Confidence 7776 67778899999999999999999999999998876654444555443
No 97
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=99.22 E-value=1.4e-12 Score=124.45 Aligned_cols=159 Identities=14% Similarity=0.140 Sum_probs=110.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
|||||||+|.||..++.+|.+.|++| .+||+++ +.+ ..+.+++++++ ..+|+|++|+|+..+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~-~~~--------------~~~~~~~~l~~--~~~DvVv~~~~~~~~ 63 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRG-EHE--------------KMVRGIDEFLQ--REMDVAVEAASQQAV 63 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSC-CCT--------------TEESSHHHHTT--SCCSEEEECSCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCc-chh--------------hhcCCHHHHhc--CCCCEEEECCCHHHH
Confidence 48999999999999999999999997 7999985 211 13678888883 239999999998643
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCChHHH---HHHHHHHHHcCCe-EEeccCCCCHHhhhcCCccccCCCHHHHHHHHHH
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEWYENT---ERRQKAVAELGLL-YLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDI 158 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~~~~~---~~~~~~l~~~g~~-~i~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~l 158 (484)
.+++ ...++.|..|++.++..+... +++.+..+++|.. ++++|++|+...+..+.. +++...++..++.
T Consensus 64 -~~~~---~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~ 136 (236)
T 2dc1_A 64 -KDYA---EKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGGLDAIFSASE---LIEEIVLTTRKNW 136 (236)
T ss_dssp -HHHH---HHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSCHHHHHHTGG---GEEEEEEEEEEEG
T ss_pred -HHHH---HHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeEEecCccccChHHHHHhhc---cccEEEEEEEcCh
Confidence 3333 334567899999988764433 6677777777877 789999999876665542 4443333333444
Q ss_pred HHHHhccCCCCCCceEEeCCchhH-HHHHHHHHHHH
Q 011501 159 LLKVAAQVPDSGPCVTYVGKGGSG-NFVKMIHNGIE 193 (484)
Q Consensus 159 l~~i~~~~~~~~~~~~~~G~~g~g-~~~K~v~N~i~ 193 (484)
++..+ ++++|.|+.+.+ ...|...|.+.
T Consensus 137 ~~~~~-------~~~~~~G~~~~~~~~~~~~~n~~~ 165 (236)
T 2dc1_A 137 RQFGR-------KGVIFEGSASEAAQKFPKNLNVAA 165 (236)
T ss_dssp GGTTS-------CEEEEEEEHHHHHHHSTTCCHHHH
T ss_pred HHcCc-------ceEEEeccHHHHHHHCCchHHHHH
Confidence 33333 456888875433 46676666554
No 98
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.21 E-value=4e-11 Score=119.92 Aligned_cols=116 Identities=18% Similarity=0.251 Sum_probs=76.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||+.+|+++...|++|.+|||++++. . ......+++++++. +|+|++++|...++
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~-----~-------~~~~~~sl~ell~~---aDvVil~vP~t~~t 236 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSG-----V-------DWIAHQSPVDLARD---SDVLAVCVAASAAT 236 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTT-----S-------CCEECSSHHHHHHT---CSEEEECC------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcccc-----c-------CceecCCHHHHHhc---CCEEEEeCCCCHHH
Confidence 689999999999999999999999999999997641 0 23456799999988 99999999988788
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCH
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGE 134 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~ 134 (484)
+.++ ++.++.+++|.++||++++.+.+...+.+.+++..+......|+..+
T Consensus 237 ~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~E 288 (340)
T 4dgs_A 237 QNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNE 288 (340)
T ss_dssp ----CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCSSS
T ss_pred HHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCC
Confidence 8888 67788899999999999999999999999988776655544555443
No 99
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.21 E-value=2.5e-11 Score=122.11 Aligned_cols=120 Identities=13% Similarity=0.111 Sum_probs=98.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|+++...|++|.+|||++.. +..... ++..+.++++++++ +|+|++++|....+
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~-------g~~~~~~l~ell~~---aDiV~l~~Plt~~t 229 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK-ERARAD-------GFAVAESKDALFEQ---SDVLSVHLRLNDET 229 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH-HHHHHT-------TCEECSSHHHHHHH---CSEEEECCCCSTTT
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH-HHHHhc-------CceEeCCHHHHHhh---CCEEEEeccCcHHH
Confidence 58999999999999999999999999999998643 333322 25666799999998 99999999988777
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCH
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGE 134 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~ 134 (484)
+.++ .+.++.+++|.++||++++.+.+...+.+.+++..+......|+..+
T Consensus 230 ~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~E 281 (352)
T 3gg9_A 230 RSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETE 281 (352)
T ss_dssp TTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSS
T ss_pred HHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCC
Confidence 7666 56778899999999999999999999999999887765554455433
No 100
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.20 E-value=5.3e-11 Score=118.98 Aligned_cols=114 Identities=16% Similarity=0.190 Sum_probs=93.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|+.|...|++|++|||++++.. + .....++++++++ +|+|++++|....+
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~-----g-------~~~~~~l~ell~~---aDvVil~vP~~~~t 229 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT-----N-------YTYYGSVVELASN---SDILVVACPLTPET 229 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC-----C-------SEEESCHHHHHHT---CSEEEECSCCCGGG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc-----C-------ceecCCHHHHHhc---CCEEEEecCCChHH
Confidence 5899999999999999999999999999999976421 1 3456789998887 99999999998777
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCC
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSG 132 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~g 132 (484)
+.++ ++..+.+++|.++||++++.+.++..+.+.+.+.++.....-++.
T Consensus 230 ~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~ 279 (333)
T 3ba1_A 230 THIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFE 279 (333)
T ss_dssp TTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCT
T ss_pred HHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCC
Confidence 7777 456778899999999999999999999999987655544333333
No 101
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.20 E-value=8e-12 Score=124.36 Aligned_cols=120 Identities=16% Similarity=0.145 Sum_probs=98.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|++|...|++|++|||+++..+.+. ......++++++++ +|+|++++|...++
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~---------~~~~~~~l~ell~~---aDvV~l~lPlt~~t 205 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFH---------ETVAFTATADALAT---ANFIVNALPLTPTT 205 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCS---------EEEEGGGCHHHHHH---CSEEEECCCCCGGG
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhHh---------hccccCCHHHHHhh---CCEEEEcCCCchHH
Confidence 5899999999999999999999999999999976532211 12334678899888 99999999988777
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHH
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEE 135 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~ 135 (484)
+.++ .+.+..+++|.++||++++.+.+...+.+.+.+..+......|+..++
T Consensus 206 ~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EP 258 (324)
T 3evt_A 206 HHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEP 258 (324)
T ss_dssp TTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSS
T ss_pred HHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCC
Confidence 7776 567788999999999999999999999999988777666666665543
No 102
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.19 E-value=3.9e-11 Score=120.59 Aligned_cols=117 Identities=15% Similarity=0.183 Sum_probs=95.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|++|...|++|++||+++++.. .... ++..+.+++++++. +|+|++++|...++
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~~-------g~~~~~~l~ell~~---aDvV~l~~P~t~~t 237 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGV-ERAL-------GLQRVSTLQDLLFH---SDCVTLHCGLNEHN 237 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTH-HHHH-------TCEECSSHHHHHHH---CSEEEECCCCCTTC
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhh-Hhhc-------CCeecCCHHHHHhc---CCEEEEcCCCCHHH
Confidence 6899999999999999999999999999999876421 1111 24456689999988 99999999998777
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCC
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVS 131 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~ 131 (484)
+.++ ++.++.+++|.++||++++.+.+...+.+.+.+.++.....-|.
T Consensus 238 ~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~ 286 (347)
T 1mx3_A 238 HHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVH 286 (347)
T ss_dssp TTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCC
T ss_pred HHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEEEEeec
Confidence 7777 66778899999999999999999999999998876654333333
No 103
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.18 E-value=1.1e-10 Score=116.67 Aligned_cols=119 Identities=18% Similarity=0.204 Sum_probs=98.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|++|...|++|++|||+++.... +.+ +.. .+++++++. +|+|++++|....+
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~--~~g-------~~~-~~l~ell~~---aDvV~l~~P~t~~t 208 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK--EKG-------CVY-TSLDELLKE---SDVISLHVPYTKET 208 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH--HTT-------CEE-CCHHHHHHH---CSEEEECCCCCTTT
T ss_pred ceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhH--hcC-------cee-cCHHHHHhh---CCEEEEeCCCChHH
Confidence 58999999999999999999999999999999876422 221 333 359999988 99999999987777
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHH
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEE 135 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~ 135 (484)
+.++ .+.+..+++|.++||++++.+.+...+.+.+.+..+.....-|+..++
T Consensus 209 ~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP 261 (334)
T 2pi1_A 209 HHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEE 261 (334)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHH
T ss_pred HHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEeecCCCCC
Confidence 7766 567788999999999999999999999999988776655556776655
No 104
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.18 E-value=3.3e-11 Score=120.37 Aligned_cols=120 Identities=12% Similarity=0.099 Sum_probs=98.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|++|...|++|++|||++.+.+.....+ +.. .+++++++. +|+|++++|....+
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g-------~~~-~~l~ell~~---aDvV~l~~P~t~~t 214 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLG-------LRQ-VACSELFAS---SDFILLALPLNADT 214 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHT-------EEE-CCHHHHHHH---CSEEEECCCCSTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcC-------cee-CCHHHHHhh---CCEEEEcCCCCHHH
Confidence 6899999999999999999999999999999974444333322 333 489999988 99999999987777
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCH
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGE 134 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~ 134 (484)
..++ .+.+..+++|.++||++++.+.+...+.+.+.+.++.....-|+..+
T Consensus 215 ~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E 266 (330)
T 4e5n_A 215 LHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEME 266 (330)
T ss_dssp TTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCGGG
T ss_pred HHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEecccccc
Confidence 7766 57788899999999999999999999999998887765555555444
No 105
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.17 E-value=6.7e-11 Score=117.76 Aligned_cols=110 Identities=13% Similarity=0.142 Sum_probs=90.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeC-ChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNR-TTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr-~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
++|||||+|.||..+|++|...|++|++||+ ++++. ...+.+ +....+++++++. +|+|++++|...+
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~~g-------~~~~~~l~ell~~---aDvVil~~p~~~~ 215 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DEASYQ-------ATFHDSLDSLLSV---SQFFSLNAPSTPE 215 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HHHHHT-------CEECSSHHHHHHH---CSEEEECCCCCTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hhhhcC-------cEEcCCHHHHHhh---CCEEEEeccCchH
Confidence 5899999999999999999999999999999 87663 222222 4455589999888 9999999998877
Q ss_pred HHHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCe
Q 011501 83 VDQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLL 124 (484)
Q Consensus 83 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 124 (484)
++.++ +..++.+++|.++||+++..+.+...+.+.+.+.++.
T Consensus 216 t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~ 258 (320)
T 1gdh_A 216 TRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLA 258 (320)
T ss_dssp TTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred HHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCc
Confidence 77777 5577889999999999999887888888888776544
No 106
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=99.17 E-value=8.3e-12 Score=124.08 Aligned_cols=119 Identities=14% Similarity=0.101 Sum_probs=95.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||+.+|++|...|++|++|||++...+.+. ......+++++++. +|+|++++|...++
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~---------~~~~~~~l~ell~~---aDvV~l~lPlt~~T 208 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFD---------QVYQLPALNKMLAQ---ADVIVSVLPATRET 208 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTCS---------EEECGGGHHHHHHT---CSEEEECCCCCSSS
T ss_pred ceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhhh---------cccccCCHHHHHhh---CCEEEEeCCCCHHH
Confidence 6899999999999999999999999999999874322110 12335688899887 99999999987777
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCH
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGE 134 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~ 134 (484)
+.++ .+.+..+++|.++||++++.+.+...+.+.+.+..+......|+..+
T Consensus 209 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~E 260 (324)
T 3hg7_A 209 HHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQE 260 (324)
T ss_dssp TTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSS
T ss_pred HHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCC
Confidence 7766 45667789999999999999999999999998877655444555444
No 107
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.17 E-value=5.2e-11 Score=119.36 Aligned_cols=120 Identities=16% Similarity=0.206 Sum_probs=98.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|++|...|++|.+|||++...+... + ...+.++++++++ +|+|++++|...++
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g-------~~~~~~l~ell~~---sDvV~l~~Plt~~T 241 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEE--G-------AIYHDTLDSLLGA---SDIFLIAAPGRPEL 241 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--T-------CEECSSHHHHHHT---CSEEEECSCCCGGG
T ss_pred CEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--C-------CeEeCCHHHHHhh---CCEEEEecCCCHHH
Confidence 5899999999999999999999999999999875433211 1 4556799999988 99999999988777
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHH
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEE 135 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~ 135 (484)
+.++ .+.+..+++|.++||++.+...+...+.+.+.+..+....-.|+..++
T Consensus 242 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP 294 (345)
T 4g2n_A 242 KGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEP 294 (345)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT
T ss_pred HHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCC
Confidence 7777 667788999999999999999999999999987666554555665544
No 108
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.16 E-value=6.4e-11 Score=118.58 Aligned_cols=117 Identities=13% Similarity=0.181 Sum_probs=93.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|+.|...|++|++|||++++ +...+.+ +.. .+++++++. +|+|++++|....+
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g-------~~~-~~l~e~l~~---aDiVil~vp~~~~t 214 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELK-------ARY-MDIDELLEK---SDIVILALPLTRDT 214 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHT-------EEE-CCHHHHHHH---CSEEEECCCCCTTT
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcC-------cee-cCHHHHHhh---CCEEEEcCCCChHH
Confidence 68999999999999999999999999999999876 3332222 343 388888887 99999999998777
Q ss_pred HHHHH-HHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCC
Q 011501 84 DQTIK-TLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGG 133 (484)
Q Consensus 84 ~~vl~-~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg 133 (484)
+.++. ++.+.+++| ++||+|+..+.+..++.+.+.+..+...+..+++.
T Consensus 215 ~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~ 264 (333)
T 2d0i_A 215 YHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFEK 264 (333)
T ss_dssp TTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCSS
T ss_pred HHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCCC
Confidence 77773 567788999 99999999988888888888775555554455543
No 109
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.15 E-value=1.1e-10 Score=115.68 Aligned_cols=109 Identities=19% Similarity=0.181 Sum_probs=90.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|+.|...|++|++||+++++ +.+.+.+ +.. .+++++++. +|+|++++|....+
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g-------~~~-~~l~ell~~---aDvV~l~~p~~~~t 210 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVN-------GKF-VDLETLLKE---SDVVTIHVPLVEST 210 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTT-------CEE-CCHHHHHHH---CSEEEECCCCSTTT
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcC-------ccc-cCHHHHHhh---CCEEEEecCCChHH
Confidence 68999999999999999999999999999999876 3333322 333 378898887 99999999988777
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCe
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLL 124 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 124 (484)
+.++ ++.++.+++|.++||+++..+.+...+.+.+.+..+.
T Consensus 211 ~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ 252 (307)
T 1wwk_A 211 YHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIA 252 (307)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred hhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCc
Confidence 7766 5677889999999999999888888888888876554
No 110
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.15 E-value=6.1e-11 Score=117.73 Aligned_cols=118 Identities=13% Similarity=0.138 Sum_probs=93.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|++|...|++|++|||++++. ...+.+ +.. .+++++++. +|+|++++|...++
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g-------~~~-~~l~ell~~---aDvVvl~~P~~~~t 210 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKIN-------AKA-VSLEELLKN---SDVISLHVTVSKDA 210 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTT-------CEE-CCHHHHHHH---CSEEEECCCCCTTS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh-HHHhcC-------cee-cCHHHHHhh---CCEEEEeccCChHH
Confidence 689999999999999999999999999999998764 222222 333 488898888 99999999987667
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCC
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGG 133 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg 133 (484)
+.++ +..++.+++|.++||++++.+.+...+.+.+++.++.-...-+...
T Consensus 211 ~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~ 261 (313)
T 2ekl_A 211 KPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWN 261 (313)
T ss_dssp CCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSS
T ss_pred HHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCC
Confidence 6666 5667789999999999999988888888888776553333334433
No 111
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=99.15 E-value=9e-11 Score=117.51 Aligned_cols=118 Identities=17% Similarity=0.220 Sum_probs=94.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|+++...|++|++|||+++.. .+. .+. ..+++++++. +|+|++++|....+
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---~~~-------~~~-~~~l~ell~~---aDvV~l~~Plt~~t 214 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE---FEP-------FLT-YTDFDTVLKE---ADIVSLHTPLFPST 214 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG---GTT-------TCE-ECCHHHHHHH---CSEEEECCCCCTTT
T ss_pred CeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh---hhc-------ccc-ccCHHHHHhc---CCEEEEcCCCCHHH
Confidence 589999999999999999999999999999997641 111 122 3389999988 99999999987777
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHH
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEE 135 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~ 135 (484)
..++ .+.+..+++|.++||++++...+...+.+.+.+..+.....-|+..++
T Consensus 215 ~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP 267 (343)
T 2yq5_A 215 ENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLAGES 267 (343)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCTTGG
T ss_pred HHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccccCC
Confidence 7666 567788999999999999999999999999988766544444444433
No 112
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.15 E-value=2e-10 Score=122.11 Aligned_cols=151 Identities=17% Similarity=0.167 Sum_probs=109.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
.++|||||+|.||..+|++|...|++|++||+++.. +...+.+ +..+ +++++++. +|+|++++|....
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g-------~~~~-~l~e~~~~---aDvV~l~~P~~~~ 209 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSP-ARAAQLG-------IELL-SLDDLLAR---ADFISVHLPKTPE 209 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCH-HHHHHHT-------CEEC-CHHHHHHH---CSEEEECCCCSTT
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHHhcC-------cEEc-CHHHHHhc---CCEEEECCCCchH
Confidence 368999999999999999999999999999998753 3333322 3444 88898888 9999999999877
Q ss_pred HHHHHHH-HhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHh----hhcCC-ccc---cC-CCHHHH
Q 011501 83 VDQTIKT-LSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEG----ARYGP-SLM---PG-GSFEAY 152 (484)
Q Consensus 83 v~~vl~~-l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~----a~~g~-~i~---~g-g~~~~~ 152 (484)
+..++.+ +++.+++|.+|||+++..+.+..++.+.+.+..+......++++++. -...+ .++ .+ -+.++.
T Consensus 210 t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~ 289 (529)
T 1ygy_A 210 TAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQ 289 (529)
T ss_dssp TTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBHHHH
T ss_pred HHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCHHHH
Confidence 7877754 77889999999999999998888888888765444333334444332 22334 332 24 367766
Q ss_pred HH-----HHHHHHHHhcc
Q 011501 153 KH-----IEDILLKVAAQ 165 (484)
Q Consensus 153 ~~-----v~~ll~~i~~~ 165 (484)
++ ++.+.+.++.+
T Consensus 290 ~~~~~~~~~~l~~~l~~~ 307 (529)
T 1ygy_A 290 DRAGTDVAESVRLALAGE 307 (529)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 65 55666666643
No 113
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=99.14 E-value=1.4e-11 Score=122.18 Aligned_cols=119 Identities=18% Similarity=0.250 Sum_probs=95.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||+.+|+.|...|++|++|||+++..+.+. ......+++++++. +|+|++++|...++
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~---------~~~~~~~l~ell~~---aDiV~l~~Plt~~t 207 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVE---------SYVGREELRAFLNQ---TRVLINLLPNTAQT 207 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCE---------EEESHHHHHHHHHT---CSEEEECCCCCGGG
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhh---------hhcccCCHHHHHhh---CCEEEEecCCchhh
Confidence 6899999999999999999999999999999976432110 01123578888887 99999999988788
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCH
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGE 134 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~ 134 (484)
+.++ .+.+..+++|.++||++.+...+...+.+.+.+..+....-.|+..+
T Consensus 208 ~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~E 259 (315)
T 3pp8_A 208 VGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQE 259 (315)
T ss_dssp TTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSS
T ss_pred hhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCC
Confidence 8777 67788899999999999999999999999998876654444555444
No 114
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.14 E-value=7.1e-11 Score=120.25 Aligned_cols=119 Identities=12% Similarity=0.058 Sum_probs=95.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|++|...|++|++|||++.+.+...+.+ +..+.+++++++. +|+|++++|...++
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G-------~~~~~~l~ell~~---aDvV~l~~Plt~~t 261 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELN-------LTWHATREDMYPV---CDVVTLNCPLHPET 261 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHT-------CEECSSHHHHGGG---CSEEEECSCCCTTT
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcC-------ceecCCHHHHHhc---CCEEEEecCCchHH
Confidence 6899999999999999999999999999999875544333322 4445689998887 99999999987777
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCC
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSG 132 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~g 132 (484)
+.++ ++.++.+++|.++||+++..+.+...+.+.+.+..+.....-|+.
T Consensus 262 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~ 311 (393)
T 2nac_A 262 EHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWF 311 (393)
T ss_dssp TTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCS
T ss_pred HHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecC
Confidence 7777 567788999999999999998888889888877554433333443
No 115
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.14 E-value=1.1e-10 Score=116.64 Aligned_cols=109 Identities=12% Similarity=0.077 Sum_probs=91.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|++|...|++|++||+++++. .....+ +.. .+++++++. +|+|++++|...++
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~g-------~~~-~~l~ell~~---aDvV~l~~P~t~~t 233 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPE-VSASFG-------VQQ-LPLEEIWPL---CDFITVHTPLLPST 233 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHH-HHHHTT-------CEE-CCHHHHGGG---CSEEEECCCCCTTT
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hhhhcC-------cee-CCHHHHHhc---CCEEEEecCCCHHH
Confidence 589999999999999999999999999999987652 222222 333 488888887 99999999998777
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCe
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLL 124 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 124 (484)
+.++ ++.++.+++|.++||+++..+.+...+.+.+.+..+.
T Consensus 234 ~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~ 275 (335)
T 2g76_A 234 TGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCA 275 (335)
T ss_dssp TTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEE
T ss_pred HHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCcc
Confidence 7777 5678889999999999999988888888888876543
No 116
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.12 E-value=1e-10 Score=118.41 Aligned_cols=118 Identities=14% Similarity=0.090 Sum_probs=96.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCc-EEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFP-ISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~-V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
++|||||+|.||..+|++|...|++ |++|||++.+.+...+. ++..+.+++++++. +|+|++++|....
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~-------g~~~~~~l~ell~~---aDvV~l~~P~t~~ 234 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKV-------GARRVENIEELVAQ---ADIVTVNAPLHAG 234 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHT-------TEEECSSHHHHHHT---CSEEEECCCCSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhc-------CcEecCCHHHHHhc---CCEEEECCCCChH
Confidence 6899999999999999999999997 99999987655443332 24556689999887 9999999999877
Q ss_pred HHHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCC
Q 011501 83 VDQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVS 131 (484)
Q Consensus 83 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~ 131 (484)
++.++ +..++.+++|.++|++++..+.+...+.+.+.+.++....--|+
T Consensus 235 t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf 284 (364)
T 2j6i_A 235 TKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVW 284 (364)
T ss_dssp TTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCC
T ss_pred HHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecC
Confidence 77777 56778899999999999999989999999998876544333344
No 117
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.12 E-value=3.3e-10 Score=114.24 Aligned_cols=118 Identities=15% Similarity=0.136 Sum_probs=93.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|+++...|++|.+||+++.. +.....+ +. ..+++++++. +|+|++++|...++
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~~~~g-------~~-~~~l~ell~~---aDvV~l~~Plt~~T 244 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPR-SMLEENG-------VE-PASLEDVLTK---SDFIFVVAAVTSEN 244 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCH-HHHHHTT-------CE-ECCHHHHHHS---CSEEEECSCSSCC-
T ss_pred CEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCH-HHHhhcC-------ee-eCCHHHHHhc---CCEEEEcCcCCHHH
Confidence 58999999999999999999999999999998643 3333222 33 3589999988 99999999998888
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCH
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGE 134 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~ 134 (484)
+.++ .+.+..+++|.++||++.+..-+...+.+.+++..+. ....|+..+
T Consensus 245 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~E 295 (365)
T 4hy3_A 245 KRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV-AASDVYPEE 295 (365)
T ss_dssp --CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSS
T ss_pred HhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce-EEeeCCCCC
Confidence 8887 6778889999999999999999999999999877665 344455443
No 118
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.11 E-value=2.5e-10 Score=117.38 Aligned_cols=147 Identities=14% Similarity=0.077 Sum_probs=101.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhC------CCcEEEEeCChhH-HHHHHHHhhhcCCCCeee----cCCHhHHHhhcCCCcE
Q 011501 4 TRIGLAGLAVMGQNLALNIAEK------GFPISVYNRTTSK-VDETVERAKQEGNLPLYG----FHDPESFVHSIQKPRV 72 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~------G~~V~v~dr~~~~-~~~~~~~~~~~~~~~~~~----~~s~~e~~~~l~~adv 72 (484)
++|||||+|.||.++|++|.+. |++|++.+++.++ .+...+.+ +.. ..+++++++. +|+
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G-------~~v~d~ta~s~aEAa~~---ADV 124 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAG-------FTEESGTLGDIWETVSG---SDL 124 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTT-------CCTTTTCEEEHHHHHHH---CSE
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCC-------CEEecCCCCCHHHHHhc---CCE
Confidence 6899999999999999999999 9999887776443 33333332 332 3578899988 999
Q ss_pred EEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHH--HHHHcCCeEEe-ccCCCCHH---hhh-------c
Q 011501 73 IIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQK--AVAELGLLYLG-MGVSGGEE---GAR-------Y 139 (484)
Q Consensus 73 Ii~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~--~l~~~g~~~i~-~pv~gg~~---~a~-------~ 139 (484)
||++||+. ...++++++.+.+++|++|+.+..... ..+.+ .....++.++- +|-..+.. ... .
T Consensus 125 VILaVP~~-~~~eVl~eI~p~LK~GaILs~AaGf~I---~~le~~~i~~p~dv~VVrVmPNtPg~~VR~~y~~G~~~~g~ 200 (525)
T 3fr7_A 125 VLLLISDA-AQADNYEKIFSHMKPNSILGLSHGFLL---GHLQSAGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGA 200 (525)
T ss_dssp EEECSCHH-HHHHHHHHHHHHSCTTCEEEESSSHHH---HHHHHTTCCCCTTSEEEEEEESSCHHHHHHHHHHHTTSTTC
T ss_pred EEECCChH-HHHHHHHHHHHhcCCCCeEEEeCCCCH---HHHhhhcccCCCCCcEEEEecCCCchhHHHHHhcccccccC
Confidence 99999997 456788899999999999877766431 11121 11123455544 57555543 111 3
Q ss_pred CC--ccccCC--CHHHHHHHHHHHHHHhc
Q 011501 140 GP--SLMPGG--SFEAYKHIEDILLKVAA 164 (484)
Q Consensus 140 g~--~i~~gg--~~~~~~~v~~ll~~i~~ 164 (484)
|. .+.+.. +.++.+.+..++..+|.
T Consensus 201 Gv~~liAv~qd~tgea~e~alala~aiG~ 229 (525)
T 3fr7_A 201 GINSSFAVHQDVDGRATDVALGWSVALGS 229 (525)
T ss_dssp SCCEEEEEEECSSSCHHHHHHHHHHHTTC
T ss_pred CccEEEEcCCCCCHHHHHHHHHHHHHCCC
Confidence 44 233333 34788899999999996
No 119
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.08 E-value=9.9e-11 Score=115.58 Aligned_cols=113 Identities=12% Similarity=0.144 Sum_probs=93.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
.++|||||+|.||..+|++|...|++|.+|||+++ +. + .....+++++++. +|+|++++|....
T Consensus 124 g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~--~~----~-------~~~~~~l~ell~~---aDvV~l~~P~~~~ 187 (303)
T 1qp8_A 124 GEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK--EG----P-------WRFTNSLEEALRE---ARAAVCALPLNKH 187 (303)
T ss_dssp TCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC--CS----S-------SCCBSCSHHHHTT---CSEEEECCCCSTT
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc--cc----C-------cccCCCHHHHHhh---CCEEEEeCcCchH
Confidence 36899999999999999999999999999999876 11 1 2335688888887 9999999999877
Q ss_pred HHHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCC
Q 011501 83 VDQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVS 131 (484)
Q Consensus 83 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~ 131 (484)
++.++ ++.++.+++|.++||+|+..+.+...+.+.+.+..+.....-|+
T Consensus 188 t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~ 237 (303)
T 1qp8_A 188 TRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVW 237 (303)
T ss_dssp TTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCC
T ss_pred HHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccC
Confidence 77777 47788899999999999999888888988888766544333444
No 120
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=99.07 E-value=1.4e-10 Score=118.55 Aligned_cols=117 Identities=15% Similarity=0.190 Sum_probs=92.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|+++...|++|++||+++.... . ......+++++++. +|+|++++|...++
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~~-----~------~~~~~~sl~ell~~---aDvV~lhvPlt~~T 222 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQY-----G------NVKPAASLDELLKT---SDVVSLHVPSSKST 222 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCCB-----T------TBEECSSHHHHHHH---CSEEEECCCC----
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhcc-----c------CcEecCCHHHHHhh---CCEEEEeCCCCHHH
Confidence 5899999999999999999999999999999854210 0 13456799999998 99999999998777
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCH
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGE 134 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~ 134 (484)
+.++ .+.+..+++|.++||+|++.+.+...+.+.+++..+......|+..+
T Consensus 223 ~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~E 274 (416)
T 3k5p_A 223 SKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVE 274 (416)
T ss_dssp -CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSC
T ss_pred hhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCC
Confidence 7777 56778899999999999999999999999998766554444555443
No 121
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=99.06 E-value=1.4e-10 Score=117.13 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=96.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch-
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP- 82 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~- 82 (484)
++|||||+|.||..+|++|...|++|.+||++.+... . .....+++++++. +|+|++++|....
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~-----~-------~~~~~sl~ell~~---aDiV~l~~Plt~~g 184 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAARG-----D-------EGDFRTLDELVQE---ADVLTFHTPLYKDG 184 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHTT-----C-------CSCBCCHHHHHHH---CSEEEECCCCCCSS
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHHhc-----c-------CcccCCHHHHHhh---CCEEEEcCcCCccc
Confidence 5899999999999999999999999999998543211 1 1235689999988 9999999998766
Q ss_pred ---HHHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHH
Q 011501 83 ---VDQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEE 135 (484)
Q Consensus 83 ---v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~ 135 (484)
+..++ .+.+..+++|.++||++.+.+.+...+.+.+++.++......|+..++
T Consensus 185 ~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP 241 (381)
T 3oet_A 185 PYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEP 241 (381)
T ss_dssp TTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTT
T ss_pred cccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCC
Confidence 66666 567778999999999999999999999999988877776667776553
No 122
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=99.06 E-value=3.9e-10 Score=112.89 Aligned_cols=118 Identities=16% Similarity=0.163 Sum_probs=95.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|+++...|++|++||+++++. + ... +....+++++++. +|+|++++|....+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-------~~~~~~l~ell~~---aDvV~l~~p~~~~t 213 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--L-EKK-------GYYVDSLDDLYKQ---ADVISLHVPDVPAN 213 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--H-HHT-------TCBCSCHHHHHHH---CSEEEECSCCCGGG
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--H-Hhh-------CeecCCHHHHHhh---CCEEEEcCCCcHHH
Confidence 589999999999999999999999999999998764 2 221 2334588999888 99999999988777
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCH
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGE 134 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~ 134 (484)
+.++ +..++.+++|.++|++++..+.+...+.+.+++.++....--|+-.+
T Consensus 214 ~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~E 265 (333)
T 1j4a_A 214 VHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGE 265 (333)
T ss_dssp TTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTC
T ss_pred HHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCCCC
Confidence 7766 45677899999999999999999999999998876654444444443
No 123
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.03 E-value=2.1e-10 Score=117.45 Aligned_cols=107 Identities=13% Similarity=0.199 Sum_probs=90.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|+++...|++|++|||++... .+ .+....+++++++. +|+|++++|...++
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-----~~------~~~~~~~l~ell~~---aDvV~l~~P~t~~t 211 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP-----LG------NATQVQHLSDLLNM---SDVVSLHVPENPST 211 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC-----CT------TCEECSCHHHHHHH---CSEEEECCCSSTTT
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc-----cC------CceecCCHHHHHhc---CCEEEEccCCChHH
Confidence 589999999999999999999999999999986431 11 24556789999988 99999999998888
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCe
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLL 124 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 124 (484)
+.++ ++.+..+++|.++||+|++.+.+...+.+.+++..+.
T Consensus 212 ~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~ 253 (404)
T 1sc6_A 212 KNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLA 253 (404)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEE
T ss_pred HHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCcc
Confidence 8777 5677889999999999999999999999988775443
No 124
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.02 E-value=2.5e-10 Score=113.14 Aligned_cols=103 Identities=17% Similarity=0.248 Sum_probs=87.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|++|...|++|++|||++++.. . ...+++++++. +|+|++++|....+
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~------~--------~~~~l~ell~~---aDvV~l~~p~~~~t 207 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP------Y--------PFLSLEELLKE---ADVVSLHTPLTPET 207 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS------S--------CBCCHHHHHHH---CSEEEECCCCCTTT
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc------c--------ccCCHHHHHhh---CCEEEEeCCCChHH
Confidence 5899999999999999999999999999999976532 1 14578898888 99999999998777
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCe
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLL 124 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 124 (484)
..++ ++.++.+++|.++||+++..+.+...+.+.++ ..+.
T Consensus 208 ~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i~ 248 (311)
T 2cuk_A 208 HRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR-GHLF 248 (311)
T ss_dssp TTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTSS
T ss_pred HhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcCC
Confidence 7777 36677899999999999998888888888887 5554
No 125
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.99 E-value=9.6e-10 Score=95.72 Aligned_cols=104 Identities=19% Similarity=0.224 Sum_probs=83.8
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecC
Q 011501 3 QTRIGLAGL----AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 3 ~~~IgiIGl----G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp 78 (484)
..+|+|||+ |.||..++++|.+.||+|+.+|++.+.+ . ++..+.|++|+.+. +|++++++|
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----~-------G~~~~~s~~el~~~---vDlvii~vp 78 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----E-------GLKCYRSVRELPKD---VDVIVFVVP 78 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----T-------TEECBSSGGGSCTT---CCEEEECSC
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----C-------CeeecCCHHHhCCC---CCEEEEEeC
Confidence 468999999 9999999999999999877776664322 1 36778899998876 999999999
Q ss_pred CCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 79 AGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 79 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
+ +.+.++++++.. ...+.+|++.++. .+++.+.+++.|+.+++
T Consensus 79 ~-~~v~~v~~~~~~-~g~~~i~~~~~~~----~~~l~~~a~~~Gi~~ig 121 (138)
T 1y81_A 79 P-KVGLQVAKEAVE-AGFKKLWFQPGAE----SEEIRRFLEKAGVEYSF 121 (138)
T ss_dssp H-HHHHHHHHHHHH-TTCCEEEECTTSC----CHHHHHHHHHHTCEEEC
T ss_pred H-HHHHHHHHHHHH-cCCCEEEEcCccH----HHHHHHHHHHCCCEEEc
Confidence 6 588888888776 4456788888775 36677777888999997
No 126
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.98 E-value=5.7e-10 Score=113.01 Aligned_cols=116 Identities=14% Similarity=0.182 Sum_probs=93.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch-
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP- 82 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~- 82 (484)
++|||||+|.||..+|++|...|++|.+||++++.. ..+ . ...+++++++. +|+|++++|...+
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~g-------~-~~~~l~ell~~---aDvV~l~~Plt~~g 181 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR----EPD-------G-EFVSLERLLAE---ADVISLHTPLNRDG 181 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH----STT-------S-CCCCHHHHHHH---CSEEEECCCCCSSS
T ss_pred CEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh----ccC-------c-ccCCHHHHHHh---CCEEEEeccCcccc
Confidence 589999999999999999999999999999876432 111 1 24689999988 9999999998876
Q ss_pred ---HHHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCH
Q 011501 83 ---VDQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGE 134 (484)
Q Consensus 83 ---v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~ 134 (484)
+..++ ++.++.+++|.++||++++.+.+...+.+.+.+.++....--|+..+
T Consensus 182 ~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~E 237 (380)
T 2o4c_A 182 EHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGE 237 (380)
T ss_dssp SSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTT
T ss_pred ccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeeccC
Confidence 66666 56778899999999999999989999999988776655444555443
No 127
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.98 E-value=5.3e-10 Score=111.87 Aligned_cols=118 Identities=16% Similarity=0.142 Sum_probs=96.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|+++...|++|++||+++++. + ... +. ..+++++++. +|+|++++|....+
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-------~~-~~~l~ell~~---aDvV~~~~P~~~~t 211 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D-HPD-------FD-YVSLEDLFKQ---SDVIDLHVPGIEQN 211 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C-CTT-------CE-ECCHHHHHHH---CSEEEECCCCCGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h-Hhc-------cc-cCCHHHHHhc---CCEEEEcCCCchhH
Confidence 589999999999999999999999999999987643 1 111 22 3488899888 99999999998777
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHH
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEE 135 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~ 135 (484)
+.++ ++.++.+++|.++||++++.+.+...+.+.+++.++.-..--|+-.++
T Consensus 212 ~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP 264 (333)
T 1dxy_A 212 THIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYET 264 (333)
T ss_dssp TTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHH
T ss_pred HHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCCCC
Confidence 7777 567788999999999999999999999999987766555455665543
No 128
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.97 E-value=5e-10 Score=111.95 Aligned_cols=118 Identities=17% Similarity=0.130 Sum_probs=95.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|+++...|++|++|||++++. + +.. +. ..+++++++. +|+|++++|....+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-------~~-~~~l~ell~~---aDvV~~~~p~t~~t 212 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I-EDY-------CT-QVSLDEVLEK---SDIITIHAPYIKEN 212 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C-TTT-------CE-ECCHHHHHHH---CSEEEECCCCCTTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H-Hhc-------cc-cCCHHHHHhh---CCEEEEecCCchHH
Confidence 589999999999999999999999999999987643 1 111 22 3488898888 99999999988777
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHH
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEE 135 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~ 135 (484)
+.++ ++.++.+++|.++||+|++.+.+...+.+.+.+.++....--|+..++
T Consensus 213 ~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP 265 (331)
T 1xdw_A 213 GAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLDGEA 265 (331)
T ss_dssp CCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTGG
T ss_pred HHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCCCCC
Confidence 7666 567788999999999999999999999999988766555445555443
No 129
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.94 E-value=2e-09 Score=104.10 Aligned_cols=109 Identities=17% Similarity=0.151 Sum_probs=83.8
Q ss_pred eEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch--
Q 011501 5 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP-- 82 (484)
Q Consensus 5 ~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~-- 82 (484)
+|+|||+|.||.+++..|.+.|++|++|||++++.+++.+... .. ..+++++ +. +|+||+|+|.+..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~------~~-~~~~~~~-~~---~Divi~~tp~~~~~~ 186 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFG------LR-AVPLEKA-RE---ARLLVNATRVGLEDP 186 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHT------CE-ECCGGGG-GG---CSEEEECSSTTTTCT
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cc-hhhHhhc-cC---CCEEEEccCCCCCCC
Confidence 7999999999999999999999999999999998888776532 23 4577777 66 9999999998731
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEec
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
+..++. .+.+++|.+|+|++.. |..+ ++.+.++++|+.+++.
T Consensus 187 ~~~~l~--~~~l~~g~~viD~~~~-p~~t-~l~~~a~~~g~~~v~g 228 (263)
T 2d5c_A 187 SASPLP--AELFPEEGAAVDLVYR-PLWT-RFLREAKAKGLKVQTG 228 (263)
T ss_dssp TCCSSC--GGGSCSSSEEEESCCS-SSSC-HHHHHHHHTTCEEECS
T ss_pred CCCCCC--HHHcCCCCEEEEeecC-Cccc-HHHHHHHHCcCEEECc
Confidence 112221 3567889999999887 4444 4666777788877743
No 130
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.90 E-value=3.1e-09 Score=104.82 Aligned_cols=138 Identities=16% Similarity=0.155 Sum_probs=95.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|+|||+|.||..+|+.|...|.+|++|||++++.+.+.+.+. ......+++++++. +|+|++++|... +
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~-----~~~~~~~l~~~l~~---aDvVi~~~p~~~-i 228 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGL-----VPFHTDELKEHVKD---IDICINTIPSMI-L 228 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC-----EEEEGGGHHHHSTT---CSEEEECCSSCC-B
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC-----eEEchhhHHHHhhC---CCEEEECCChhh-h
Confidence 68999999999999999999999999999999987665544221 11113466666665 999999999853 2
Q ss_pred HHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEecc-CCCCHHhhhcCCccccCCCHHHHHHHHHHHHHH
Q 011501 84 DQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMG-VSGGEEGARYGPSLMPGGSFEAYKHIEDILLKV 162 (484)
Q Consensus 84 ~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p-v~gg~~~a~~g~~i~~gg~~~~~~~v~~ll~~i 162 (484)
. +.....++++.++||++....... + +.....|+.++++| +.++...+..+. -.++.+.+++..+
T Consensus 229 ~---~~~~~~mk~g~~lin~a~g~~~~~--~-~~a~~~G~~~i~~pg~~g~v~~a~a~~--------l~~~~~~~~l~~~ 294 (300)
T 2rir_A 229 N---QTVLSSMTPKTLILDLASRPGGTD--F-KYAEKQGIKALLAPGLPGIVAPKTAGQ--------ILANVLSKLLAEI 294 (300)
T ss_dssp C---HHHHTTSCTTCEEEECSSTTCSBC--H-HHHHHHTCEEEECCCHHHHHCHHHHHH--------HHHHHHHHHHHHH
T ss_pred C---HHHHHhCCCCCEEEEEeCCCCCcC--H-HHHHHCCCEEEECCCCCCcHHHHHHHH--------HHHHHHHHHHHHh
Confidence 2 234567889999999998643322 2 44556799999888 444332332222 1245566777766
Q ss_pred hc
Q 011501 163 AA 164 (484)
Q Consensus 163 ~~ 164 (484)
+.
T Consensus 295 ~~ 296 (300)
T 2rir_A 295 QA 296 (300)
T ss_dssp HH
T ss_pred cc
Confidence 54
No 131
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.89 E-value=1.5e-09 Score=105.65 Aligned_cols=110 Identities=18% Similarity=0.210 Sum_probs=82.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|+|||+|.||.+++..|.+.|++|++|||++++.+++.+.. ++....+++++++. +|+||.|+|.+..-
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~------g~~~~~~~~~~~~~---aDiVi~atp~~~~~ 200 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF------PLEVVNSPEEVIDK---VQVIVNTTSVGLKD 200 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS------CEEECSCGGGTGGG---CSEEEECSSTTSST
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc------CCeeehhHHhhhcC---CCEEEEeCCCCCCC
Confidence 5899999999999999999999999999999999887765432 24555577777766 99999999987421
Q ss_pred --HHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEec
Q 011501 84 --DQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 84 --~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
...+. .+.++++.+|+|+++ .. .++.+...++|+.+++.
T Consensus 201 ~~~~~i~--~~~l~~g~~viDv~~-~~---t~ll~~a~~~g~~~v~g 241 (275)
T 2hk9_A 201 EDPEIFN--YDLIKKDHVVVDIIY-KE---TKLLKKAKEKGAKLLDG 241 (275)
T ss_dssp TCCCSSC--GGGCCTTSEEEESSS-SC---CHHHHHHHHTTCEEECS
T ss_pred CCCCCCC--HHHcCCCCEEEEcCC-Ch---HHHHHHHHHCcCEEECC
Confidence 11221 345788999999998 32 23445556678877653
No 132
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.87 E-value=2.4e-09 Score=94.00 Aligned_cols=104 Identities=10% Similarity=0.082 Sum_probs=82.8
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhCCCcEEEEeCCh--hHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEe
Q 011501 3 QTRIGLAGL----AVMGQNLALNIAEKGFPISVYNRTT--SKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 3 ~~~IgiIGl----G~mG~~lA~~L~~~G~~V~v~dr~~--~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
+.+|+|||+ |.||..++++|.+.||+|+.+|++. +.+ . ++..+.|++|+.+. +|+++++
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-----~-------G~~~~~sl~el~~~---~Dlvii~ 77 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-----L-------GQQGYATLADVPEK---VDMVDVF 77 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE-----T-------TEECCSSTTTCSSC---CSEEECC
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc-----C-------CeeccCCHHHcCCC---CCEEEEE
Confidence 357999999 8999999999999999977777765 221 1 36777889888765 9999999
Q ss_pred cCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 77 VKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 77 vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
+|+ ..+.++++++.. ...+.+|++.++. .+++.+.+++.|+.+++
T Consensus 78 vp~-~~v~~v~~~~~~-~g~~~i~i~~~~~----~~~l~~~a~~~Gi~~ig 122 (145)
T 2duw_A 78 RNS-EAAWGVAQEAIA-IGAKTLWLQLGVI----NEQAAVLAREAGLSVVM 122 (145)
T ss_dssp SCS-THHHHHHHHHHH-HTCCEEECCTTCC----CHHHHHHHHTTTCEEEC
T ss_pred eCH-HHHHHHHHHHHH-cCCCEEEEcCChH----HHHHHHHHHHcCCEEEc
Confidence 996 588899988776 4456788887765 45677778888999986
No 133
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.85 E-value=4.3e-08 Score=84.35 Aligned_cols=117 Identities=15% Similarity=0.146 Sum_probs=79.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeee-cCCHhHHHh-hcCCCcEEEEecCCC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYG-FHDPESFVH-SIQKPRVIIMLVKAG 80 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~-~~s~~e~~~-~l~~advIi~~vp~~ 80 (484)
.|+|.|+|+|.+|..++..|.+.|++|+++|+++++.+.+.+..... -+.. ..+.+.+.+ .++.+|+||+++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~---~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 80 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL---VINGDCTKIKTLEDAGIEDADMYIAVTGKE 80 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE---EEESCTTSHHHHHHTTTTTCSEEEECCSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcE---EEEcCCCCHHHHHHcCcccCCEEEEeeCCc
Confidence 36899999999999999999999999999999999887776431100 0111 123333322 245699999999886
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
.....+..+.+.+.++.+|+..++.. . .+.+.+.|+.++-+|
T Consensus 81 -~~~~~~~~~~~~~~~~~ii~~~~~~~--~----~~~l~~~g~~~v~~p 122 (140)
T 1lss_A 81 -EVNLMSSLLAKSYGINKTIARISEIE--Y----KDVFERLGVDVVVSP 122 (140)
T ss_dssp -HHHHHHHHHHHHTTCCCEEEECSSTT--H----HHHHHHTTCSEEECH
T ss_pred -hHHHHHHHHHHHcCCCEEEEEecCHh--H----HHHHHHcCCCEEECH
Confidence 44444555566677778887665543 2 234556788777666
No 134
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.82 E-value=3.2e-08 Score=97.71 Aligned_cols=114 Identities=14% Similarity=0.174 Sum_probs=85.6
Q ss_pred CCCCeEEEEcccHHHHH-HHHHHHhC-CCcEE-EEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEec
Q 011501 1 MVQTRIGLAGLAVMGQN-LALNIAEK-GFPIS-VYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLV 77 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~v 77 (484)
|+++||||||+|.||.. ++..|.+. ++++. ++|+++++.+.+.+... +..+++++++++. +|+|++|+
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~------~~~~~~~~~ll~~---~D~V~i~t 74 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYR------IMPFDSIESLAKK---CDCIFLHS 74 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHT------CCBCSCHHHHHTT---CSEEEECC
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcC------CCCcCCHHHHHhc---CCEEEEeC
Confidence 55679999999999996 88888874 66766 89999999988876542 3448899999885 99999999
Q ss_pred CCCchHHHHHHHHhhhcCCCC-EEEe-cCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 78 KAGSPVDQTIKTLSVYMEKGD-CIID-GGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 78 p~~~~v~~vl~~l~~~l~~g~-iiId-~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
|+..+.+.+...+ ..|. ++++ -.+..+.+.+++.+.++++|+.+.-
T Consensus 75 p~~~h~~~~~~al----~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~v 122 (308)
T 3uuw_A 75 STETHYEIIKILL----NLGVHVYVDKPLASTVSQGEELIELSTKKNLNLMV 122 (308)
T ss_dssp CGGGHHHHHHHHH----HTTCEEEECSSSSSSHHHHHHHHHHHHHHTCCEEE
T ss_pred CcHhHHHHHHHHH----HCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 9987655544333 3343 5555 3556678888888888888876543
No 135
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.76 E-value=1.1e-08 Score=89.47 Aligned_cols=90 Identities=21% Similarity=0.334 Sum_probs=72.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|+|||+|.||..++..|.+.|++|++|||++++.+.+.+.... .+....+..++++. +|+||.++|.+..+
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~----~~~~~~~~~~~~~~---~Divi~at~~~~~~ 94 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEY----EYVLINDIDSLIKN---NDVIITATSSKTPI 94 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTC----EEEECSCHHHHHHT---CSEEEECSCCSSCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCC----ceEeecCHHHHhcC---CCEEEEeCCCCCcE
Confidence 589999999999999999999999999999999998887765421 23456788888877 99999999987432
Q ss_pred HHHHHHHhhhcCCCCEEEecCC
Q 011501 84 DQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 84 ~~vl~~l~~~l~~g~iiId~st 105 (484)
+. ...+.+|.+++|.+.
T Consensus 95 ---~~--~~~l~~g~~vid~~~ 111 (144)
T 3oj0_A 95 ---VE--ERSLMPGKLFIDLGN 111 (144)
T ss_dssp ---BC--GGGCCTTCEEEECCS
T ss_pred ---ee--HHHcCCCCEEEEccC
Confidence 11 245778999999876
No 136
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.74 E-value=6.2e-08 Score=96.68 Aligned_cols=115 Identities=11% Similarity=0.173 Sum_probs=87.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC-CCcEE-EEeCChhHHHHHHHHhhhcCCCCe-eecCCHhHHHhhcCCCcEEEEecCC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKQEGNLPL-YGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
++||||||+|.||..++..|.+. +++|. ++|+++++.+.+.+... + ..+++++++++. ..+|+|++|+|+
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~------~~~~~~~~~~ll~~-~~~D~V~i~tp~ 77 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELA------IPVAYGSYEELCKD-ETIDIIYIPTYN 77 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTT------CCCCBSSHHHHHHC-TTCSEEEECCCG
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcC------CCceeCCHHHHhcC-CCCCEEEEcCCC
Confidence 46899999999999999999985 66665 78999999888876542 3 467899999873 238999999999
Q ss_pred CchHHHHHHHHhhhcCCC-CEEEecC-CCChHHHHHHHHHHHHcCCeEEec
Q 011501 80 GSPVDQTIKTLSVYMEKG-DCIIDGG-NEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g-~iiId~s-t~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
..+.+.+...+. .| .++++.- +..+.+++++.+..++.|+.+..+
T Consensus 78 ~~h~~~~~~al~----~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~ 124 (330)
T 3e9m_A 78 QGHYSAAKLALS----QGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEA 124 (330)
T ss_dssp GGHHHHHHHHHH----TTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHH----CCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 876665544333 33 4677654 566778888888888888766544
No 137
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.74 E-value=8e-08 Score=96.77 Aligned_cols=115 Identities=15% Similarity=0.214 Sum_probs=87.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC-CCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEK-GFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAG 80 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 80 (484)
++||||||+|.||..++..|.+. +++| .++|+++++.+.+.+.. ++..+++++++++. ..+|+|++|+|+.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~------g~~~~~~~~~~l~~-~~~D~V~i~tp~~ 77 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRY------NCAGDATMEALLAR-EDVEMVIITVPND 77 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHH------TCCCCSSHHHHHHC-SSCCEEEECSCTT
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHc------CCCCcCCHHHHhcC-CCCCEEEEeCChH
Confidence 45899999999999999999987 7775 48899999988887654 24568899999853 2389999999998
Q ss_pred chHHHHHHHHhhhcCCCC-EEEecC-CCChHHHHHHHHHHHHcCCeEEec
Q 011501 81 SPVDQTIKTLSVYMEKGD-CIIDGG-NEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
.+.+.+...+. .|. ++++.- +..+.+.+++.+..+++|+.+.-+
T Consensus 78 ~h~~~~~~al~----~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~ 123 (354)
T 3db2_A 78 KHAEVIEQCAR----SGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCG 123 (354)
T ss_dssp SHHHHHHHHHH----TTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHHHHH----cCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEe
Confidence 77665544333 343 566543 556778888888888888765443
No 138
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.72 E-value=1e-07 Score=95.11 Aligned_cols=114 Identities=11% Similarity=0.079 Sum_probs=86.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC-CCcEE-EEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAG 80 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 80 (484)
++||||||+|.||..++..|.+. +++|. ++|+++++.+.+.+.. ++. +++++++++. ..+|+|++|+|+.
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~------~~~-~~~~~~~l~~-~~~D~V~i~tp~~ 74 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAY------GCE-VRTIDAIEAA-ADIDAVVICTPTD 74 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHT------TCE-ECCHHHHHHC-TTCCEEEECSCGG
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHh------CCC-cCCHHHHhcC-CCCCEEEEeCCch
Confidence 46999999999999999999986 67765 7999999988887654 356 8899999873 2389999999998
Q ss_pred chHHHHHHHHhhhcCCC-CEEEecC-CCChHHHHHHHHHHHHcCCeEEec
Q 011501 81 SPVDQTIKTLSVYMEKG-DCIIDGG-NEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g-~iiId~s-t~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
.+.+.+...+ ..| .++++.- +..+.+.+++.+.+++.|+.+..+
T Consensus 75 ~h~~~~~~al----~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 120 (331)
T 4hkt_A 75 THADLIERFA----RAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVG 120 (331)
T ss_dssp GHHHHHHHHH----HTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred hHHHHHHHHH----HcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEc
Confidence 7666554333 234 3555543 566788888888888888766543
No 139
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.71 E-value=6.2e-08 Score=95.13 Aligned_cols=112 Identities=15% Similarity=0.100 Sum_probs=81.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeee--cCCHhHHHhhcCCCcEEEEecCCC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYG--FHDPESFVHSIQKPRVIIMLVKAG 80 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~--~~s~~e~~~~l~~advIi~~vp~~ 80 (484)
.++|+|||+|.||..+|+.|...|.+|++|||++++.+.+.+.+ ... ..+++++++. +|+|++++|..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~~~~~~l~~~l~~---aDvVi~~~p~~ 224 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMG-------MEPFHISKAAQELRD---VDVCINTIPAL 224 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-------SEEEEGGGHHHHTTT---CSEEEECCSSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCC-------CeecChhhHHHHhcC---CCEEEECCChH
Confidence 36899999999999999999999999999999998766554322 222 2456666665 99999999975
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCC
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVS 131 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~ 131 (484)
..-+ .....++++.++||++....... + +.....|+.++.+|-.
T Consensus 225 ~i~~----~~l~~mk~~~~lin~ar~~~~~~--~-~~a~~~Gv~~~~~~~l 268 (293)
T 3d4o_A 225 VVTA----NVLAEMPSHTFVIDLASKPGGTD--F-RYAEKRGIKALLVPGL 268 (293)
T ss_dssp CBCH----HHHHHSCTTCEEEECSSTTCSBC--H-HHHHHHTCEEEECCCH
T ss_pred HhCH----HHHHhcCCCCEEEEecCCCCCCC--H-HHHHHCCCEEEECCCC
Confidence 3222 33456789999999997543321 2 4445678888877643
No 140
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.70 E-value=9.1e-08 Score=95.93 Aligned_cols=118 Identities=14% Similarity=0.104 Sum_probs=86.9
Q ss_pred CC-CCeEEEEcccHHHHHHHHHHHhC-CCcEE-EEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEec
Q 011501 1 MV-QTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLV 77 (484)
Q Consensus 1 M~-~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~v 77 (484)
|+ ++||||||+|.||..++..|.+. +++|. ++|+++++.+.+.+.. +...+++++++++. ..+|+|++|+
T Consensus 1 M~~~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~------g~~~~~~~~~~l~~-~~~D~V~i~t 73 (344)
T 3euw_A 1 MSLTLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEAN------GAEAVASPDEVFAR-DDIDGIVIGS 73 (344)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTT------TCEEESSHHHHTTC-SCCCEEEECS
T ss_pred CCCceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHc------CCceeCCHHHHhcC-CCCCEEEEeC
Confidence 54 46899999999999999999986 66765 8999999988877643 35678999999873 2389999999
Q ss_pred CCCchHHHHHHHHhhhcCCCCEEEecC-CCChHHHHHHHHHHHHcCCeEEec
Q 011501 78 KAGSPVDQTIKTLSVYMEKGDCIIDGG-NEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 78 p~~~~v~~vl~~l~~~l~~g~iiId~s-t~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
|+..+.+.+...+.. ...++++.- +..+....++.+.+++.|+.+..+
T Consensus 74 p~~~h~~~~~~al~~---gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 122 (344)
T 3euw_A 74 PTSTHVDLITRAVER---GIPALCEKPIDLDIEMVRACKEKIGDGASKVMLG 122 (344)
T ss_dssp CGGGHHHHHHHHHHT---TCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEEC
T ss_pred CchhhHHHHHHHHHc---CCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEec
Confidence 998766655443322 224666654 566778888888888777755443
No 141
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.70 E-value=1.1e-07 Score=86.24 Aligned_cols=115 Identities=9% Similarity=0.087 Sum_probs=76.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhC-CCcEEEEeCChhHHHHHHHHhhhcCCCCee-ec-CCHhHHHhh--cCCCcEEEEecC
Q 011501 4 TRIGLAGLAVMGQNLALNIAEK-GFPISVYNRTTSKVDETVERAKQEGNLPLY-GF-HDPESFVHS--IQKPRVIIMLVK 78 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~-G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~-~~-~s~~e~~~~--l~~advIi~~vp 78 (484)
++|.|+|+|.||..+|+.|.+. |++|+++|+++++.+.+.+.+. .+. .. .+.+.+.+. ++++|+||+++|
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~-----~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGR-----NVISGDATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTC-----CEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCC-----CEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence 5899999999999999999999 9999999999999888765432 111 11 233323222 456999999999
Q ss_pred CCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 79 AGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 79 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
++.....++..+. .+.+...|+..++ .+.. .+.+.+.|+.++..|
T Consensus 115 ~~~~~~~~~~~~~-~~~~~~~ii~~~~-~~~~----~~~l~~~G~~~vi~p 159 (183)
T 3c85_A 115 HHQGNQTALEQLQ-RRNYKGQIAAIAE-YPDQ----LEGLLESGVDAAFNI 159 (183)
T ss_dssp SHHHHHHHHHHHH-HTTCCSEEEEEES-SHHH----HHHHHHHTCSEEEEH
T ss_pred ChHHHHHHHHHHH-HHCCCCEEEEEEC-CHHH----HHHHHHcCCCEEEch
Confidence 8755444444333 3444444444333 2332 234556688887776
No 142
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.70 E-value=9.7e-08 Score=94.43 Aligned_cols=98 Identities=15% Similarity=0.089 Sum_probs=70.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhCC--CcEEEEeCChhHHHHHHHHhhhc---CCCCeee-cCCHhHHHhhcCCCcEEEEec
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKG--FPISVYNRTTSKVDETVERAKQE---GNLPLYG-FHDPESFVHSIQKPRVIIMLV 77 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G--~~V~v~dr~~~~~~~~~~~~~~~---~~~~~~~-~~s~~e~~~~l~~advIi~~v 77 (484)
|||+|||+|.||.++|..|+++| ++|.+||+++++++.+....... ....+.. ..++ +.++. +|+||+++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~---aDvViiav 77 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALAD---ADVVISTL 77 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTT---CSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCC---CCEEEEec
Confidence 69999999999999999999999 79999999998887765432100 0001233 3455 44444 99999999
Q ss_pred CCCch-------------------HHHHHHHHhhhcCCCCEEEecCCC
Q 011501 78 KAGSP-------------------VDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 78 p~~~~-------------------v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
|.+.. ++++++.+.++. ++.+||..+|.
T Consensus 78 ~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp 124 (309)
T 1hyh_A 78 GNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNP 124 (309)
T ss_dssp SCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECSSS
T ss_pred CCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCc
Confidence 98653 467777777765 56677777664
No 143
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.70 E-value=1.2e-07 Score=95.43 Aligned_cols=117 Identities=14% Similarity=0.112 Sum_probs=87.1
Q ss_pred CCCCeEEEEcccHHHH-HHHHHHHhC-CCcEE-EEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEec
Q 011501 1 MVQTRIGLAGLAVMGQ-NLALNIAEK-GFPIS-VYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLV 77 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~-~lA~~L~~~-G~~V~-v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~v 77 (484)
|.++||||||+|.||. .++..|.+. +++|. ++|+++++.+.+.+.. ++..+.+++++++. ...|+|++|+
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~------g~~~~~~~~~ll~~-~~~D~V~i~t 97 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERF------GGEPVEGYPALLER-DDVDAVYVPL 97 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHH------CSEEEESHHHHHTC-TTCSEEEECC
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHc------CCCCcCCHHHHhcC-CCCCEEEECC
Confidence 4456899999999998 799999887 67764 8899999988887654 25567899999864 3489999999
Q ss_pred CCCchHHHHHHHHhhhcCCCC-EEEecC-CCChHHHHHHHHHHHHcCCeEEec
Q 011501 78 KAGSPVDQTIKTLSVYMEKGD-CIIDGG-NEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 78 p~~~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
|+..+.+.+...+. .|. ++++.- +..+.+++++.+..++.|+.+..+
T Consensus 98 p~~~h~~~~~~al~----aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~ 146 (350)
T 3rc1_A 98 PAVLHAEWIDRALR----AGKHVLAEKPLTTDRPQAERLFAVARERGLLLMEN 146 (350)
T ss_dssp CGGGHHHHHHHHHH----TTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CcHHHHHHHHHHHH----CCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEE
Confidence 99877665544332 343 566543 556788888888888888766543
No 144
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.69 E-value=1.2e-07 Score=95.48 Aligned_cols=114 Identities=16% Similarity=0.198 Sum_probs=85.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC--CCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEK--GFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~--G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
++||||||+|.||..++..|.+. ++++ .++|+++++.+.+.+.. ++..+++++++++. ..+|+|++|+|+
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~------~~~~~~~~~~ll~~-~~~D~V~i~tp~ 85 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERT------GARGHASLTDMLAQ-TDADIVILTTPS 85 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHH------CCEEESCHHHHHHH-CCCSEEEECSCG
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHc------CCceeCCHHHHhcC-CCCCEEEECCCc
Confidence 35899999999999999999987 6775 48999999988887654 36788999999873 238999999999
Q ss_pred CchHHHHHHHHhhhcCCCC-EEEecC-CCChHHHHHHHHHHHHcCCeEEe
Q 011501 80 GSPVDQTIKTLSVYMEKGD-CIIDGG-NEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
..+.+.+...+ ..|. ++++.- +..+.+..++.+..++.|+.+.-
T Consensus 86 ~~h~~~~~~al----~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v 131 (354)
T 3q2i_A 86 GLHPTQSIECS----EAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFV 131 (354)
T ss_dssp GGHHHHHHHHH----HTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHH----HCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEE
Confidence 86655544333 3444 455432 45567888888888888876643
No 145
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.69 E-value=9.2e-09 Score=103.47 Aligned_cols=119 Identities=13% Similarity=0.119 Sum_probs=89.2
Q ss_pred CeEEEEcccHHHHHHHHHHHh--CCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 4 TRIGLAGLAVMGQNLALNIAE--KGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~--~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
.+|+|||+|.||..++..|.. ...+|.+|||++++.+++.+......+..+..+.+++++++. +|+|++|+|.+.
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~---aDiVi~aTps~~ 206 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKG---VDIITTVTADKA 206 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTT---CSEEEECCCCSS
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhc---CCEEEEeccCCC
Confidence 589999999999999998764 346899999999999998876421000124567889998887 999999999862
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
...++. ...+++|..|++.++..|. .+++...+..++..|+|..
T Consensus 207 -~~pvl~--~~~l~~G~~V~~vgs~~p~-~~El~~~~~~~a~v~vD~~ 250 (350)
T 1x7d_A 207 -YATIIT--PDMLEPGMHLNAVGGDCPG-KTELHADVLRNARVFVEYE 250 (350)
T ss_dssp -EEEEEC--GGGCCTTCEEEECSCCBTT-BEEECHHHHHTSEEEESSH
T ss_pred -CCceec--HHHcCCCCEEEECCCCCCC-ceeeCHHHHhcCcEEECCH
Confidence 112221 2467899999999998876 5555566666777899873
No 146
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.67 E-value=1.5e-07 Score=94.36 Aligned_cols=116 Identities=12% Similarity=0.194 Sum_probs=86.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC-CCcEE-EEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAG 80 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 80 (484)
++||||||+|.||..++..|.+. ++++. ++|+++++.+.+.+.... ...+++++++++. ..+|+|++|+|+.
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~-~~~D~V~i~tp~~ 75 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGV-----EKAYKDPHELIED-PNVDAVLVCSSTN 75 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTC-----SEEESSHHHHHHC-TTCCEEEECSCGG
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCC-----CceeCCHHHHhcC-CCCCEEEEcCCCc
Confidence 46999999999999999999885 56655 789999998888765421 2468899999883 2389999999998
Q ss_pred chHHHHHHHHhhhcCCCC-EEEecC-CCChHHHHHHHHHHHHcCCeEEec
Q 011501 81 SPVDQTIKTLSVYMEKGD-CIIDGG-NEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
.+.+.+...+ ..|. ++++.- +..+.+..++.+..++.|+.+.-+
T Consensus 76 ~h~~~~~~al----~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~ 121 (344)
T 3ezy_A 76 THSELVIACA----KAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTG 121 (344)
T ss_dssp GHHHHHHHHH----HTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred chHHHHHHHH----hcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEe
Confidence 6655544333 3343 666643 566788888888888888765443
No 147
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.64 E-value=2.5e-07 Score=80.13 Aligned_cols=116 Identities=11% Similarity=0.114 Sum_probs=75.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhh--cCCCcEEEEecCCC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHS--IQKPRVIIMLVKAG 80 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~--l~~advIi~~vp~~ 80 (484)
+++|.|+|+|.+|..+|..|.+.|++|.++|+++++++.+.+.+.. -+....+..+.++. ++++|+||+++|+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~----~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFD----AVIADPTDESFYRSLDLEGVSAVLITGSDD 81 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCE----EEECCTTCHHHHHHSCCTTCSEEEECCSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCc----EEECCCCCHHHHHhCCcccCCEEEEecCCH
Confidence 4689999999999999999999999999999999998887764321 01122222333332 34699999999965
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
.....+-..+..+....+|.-..+.. . .+.+.+.|+..+-.|
T Consensus 82 -~~n~~~~~~a~~~~~~~iia~~~~~~--~----~~~l~~~G~~~vi~p 123 (141)
T 3llv_A 82 -EFNLKILKALRSVSDVYAIVRVSSPK--K----KEEFEEAGANLVVLV 123 (141)
T ss_dssp -HHHHHHHHHHHHHCCCCEEEEESCGG--G----HHHHHHTTCSEEEEH
T ss_pred -HHHHHHHHHHHHhCCceEEEEEcChh--H----HHHHHHcCCCEEECH
Confidence 33333333333344556666554432 2 234456677665554
No 148
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.64 E-value=1.8e-07 Score=94.33 Aligned_cols=116 Identities=12% Similarity=0.235 Sum_probs=85.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHH-h-CCCcEE-EEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEec
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIA-E-KGFPIS-VYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLV 77 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~-~-~G~~V~-v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~v 77 (484)
|+++||||||+|.||..++..|. + .+++|. ++|+++++.+.+.+.... ....+++++++++. ...|+|++|+
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~----~~~~~~~~~~ll~~-~~~D~V~i~t 95 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAI----EAKDYNDYHDLIND-KDVEVVIITA 95 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTC----CCEEESSHHHHHHC-TTCCEEEECS
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCC----CCeeeCCHHHHhcC-CCCCEEEEcC
Confidence 55568999999999999999998 4 367755 799999998888765420 14678899999874 3489999999
Q ss_pred CCCchHHHHHHHHhhhcCCC-CEEEecC-CCChHHHHHHHHHHHHcCCeE
Q 011501 78 KAGSPVDQTIKTLSVYMEKG-DCIIDGG-NEWYENTERRQKAVAELGLLY 125 (484)
Q Consensus 78 p~~~~v~~vl~~l~~~l~~g-~iiId~s-t~~~~~~~~~~~~l~~~g~~~ 125 (484)
|+..+.+.+...+. .| .++++.- +..+.+++++.+..++.|+.+
T Consensus 96 p~~~h~~~~~~al~----aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~ 141 (357)
T 3ec7_A 96 SNEAHADVAVAALN----ANKYVFCEKPLAVTAADCQRVIEAEQKNGKRM 141 (357)
T ss_dssp CGGGHHHHHHHHHH----TTCEEEEESSSCSSHHHHHHHHHHHHHHTSCC
T ss_pred CcHHHHHHHHHHHH----CCCCEEeecCccCCHHHHHHHHHHHHHhCCeE
Confidence 99876665544333 34 4555533 556678888888888888754
No 149
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.64 E-value=2e-07 Score=92.48 Aligned_cols=113 Identities=18% Similarity=0.171 Sum_probs=82.5
Q ss_pred CCeEEEEcccHHHHH-HHHHHHhC-CCcEE-EEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 3 QTRIGLAGLAVMGQN-LALNIAEK-GFPIS-VYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
+++|||||+|.||.. ++..|.+. ++++. ++|+++++.+.+.+... +..+++.+++.. .+|+|++++|+
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g------~~~~~~~~~l~~---~~D~V~i~tp~ 75 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWR------IPYADSLSSLAA---SCDAVFVHSST 75 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHT------CCBCSSHHHHHT---TCSEEEECSCT
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcC------CCccCcHHHhhc---CCCEEEEeCCc
Confidence 468999999999997 88888764 67765 89999999888776542 345678877733 49999999999
Q ss_pred CchHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHcCCeEEec
Q 011501 80 GSPVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
..+.+.+... ++.|. ++++. .+..+.+.+++.+.+++.|+.+..+
T Consensus 76 ~~h~~~~~~a----l~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~ 122 (319)
T 1tlt_A 76 ASHFDVVSTL----LNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMVG 122 (319)
T ss_dssp THHHHHHHHH----HHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred hhHHHHHHHH----HHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEe
Confidence 8655544333 33555 66663 4556778888888888888766543
No 150
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.63 E-value=2.3e-07 Score=80.54 Aligned_cols=116 Identities=18% Similarity=0.255 Sum_probs=75.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHh--hcCCCcEEEEecCCCc
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVH--SIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~--~l~~advIi~~vp~~~ 81 (484)
.+|.|+|+|.+|..+|..|.+.|++|+++|+++++++.+.+.+... +....+..+... .++++|.||+++|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~----i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRA----VLGNAANEEIMQLAHLECAKWLILTIPNGY 83 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEE----EESCTTSHHHHHHTTGGGCSEEEECCSCHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCE----EECCCCCHHHHHhcCcccCCEEEEECCChH
Confidence 4799999999999999999999999999999999998887643210 112222333333 2345999999999874
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
....++..+ ..+.++..||-..+. +. ..+.+.+.|+..+-.|
T Consensus 84 ~n~~~~~~a-~~~~~~~~iiar~~~-~~----~~~~l~~~G~d~vi~p 125 (140)
T 3fwz_A 84 EAGEIVASA-RAKNPDIEIIARAHY-DD----EVAYITERGANQVVMG 125 (140)
T ss_dssp HHHHHHHHH-HHHCSSSEEEEEESS-HH----HHHHHHHTTCSEEEEH
T ss_pred HHHHHHHHH-HHHCCCCeEEEEECC-HH----HHHHHHHCCCCEEECc
Confidence 444344333 334344444433332 22 2345566788766555
No 151
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.61 E-value=1e-07 Score=93.71 Aligned_cols=118 Identities=15% Similarity=0.146 Sum_probs=82.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
.++|.|||+|.||.+++..|++.|. +|+++||++++.+++.+......+ .+....++.+.+.. +|+||.|+|.+.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~-~~~~~~~~~~~~~~---aDivIn~t~~~~ 216 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS-AYFSLAEAETRLAE---YDIIINTTSVGM 216 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC-CEECHHHHHHTGGG---CSEEEECSCTTC
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC-ceeeHHHHHhhhcc---CCEEEECCCCCC
Confidence 3589999999999999999999998 999999999998888765321000 01111233343444 999999999874
Q ss_pred hH--HHH-HHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEec
Q 011501 82 PV--DQT-IKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 82 ~v--~~v-l~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
.. +.+ +. ...++++.+++|++.. |..| ++.+..+++|..+++.
T Consensus 217 ~~~~~~~~i~--~~~l~~~~~v~D~~y~-P~~T-~ll~~A~~~G~~~v~G 262 (297)
T 2egg_A 217 HPRVEVQPLS--LERLRPGVIVSDIIYN-PLET-KWLKEAKARGARVQNG 262 (297)
T ss_dssp SSCCSCCSSC--CTTCCTTCEEEECCCS-SSSC-HHHHHHHHTTCEEECS
T ss_pred CCCCCCCCCC--HHHcCCCCEEEEcCCC-CCCC-HHHHHHHHCcCEEECC
Confidence 21 100 10 1346789999999985 5555 3667778888877654
No 152
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.60 E-value=1.7e-07 Score=93.02 Aligned_cols=102 Identities=14% Similarity=0.208 Sum_probs=72.1
Q ss_pred CC-CCeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHH----hhhc-CCCCeeecCCHhHHHhhcCCCcEE
Q 011501 1 MV-QTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVER----AKQE-GNLPLYGFHDPESFVHSIQKPRVI 73 (484)
Q Consensus 1 M~-~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~----~~~~-~~~~~~~~~s~~e~~~~l~~advI 73 (484)
|. .+||+|||+|.||.++|..|+.+|+ +|.+||+++++++..... .... ...++..+++. +.++. +|+|
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~---aDiV 76 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISG---SDVV 76 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT---CSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCC---CCEE
Confidence 54 3689999999999999999999998 999999999877653211 0000 01135555666 44554 9999
Q ss_pred EEecCCCc---------------hHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 74 IMLVKAGS---------------PVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 74 i~~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
|++++.+. ..+++++.+.++. ++.+++..||..
T Consensus 77 i~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~-~~~iii~~sNp~ 124 (317)
T 2ewd_A 77 IITASIPGRPKDDRSELLFGNARILDSVAEGVKKYC-PNAFVICITNPL 124 (317)
T ss_dssp EECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSH
T ss_pred EEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEeCChH
Confidence 99994321 2456667777775 588898888854
No 153
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=98.60 E-value=1e-07 Score=95.20 Aligned_cols=119 Identities=18% Similarity=0.222 Sum_probs=95.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.+|+.+|+.+..-|.+|.+||+.+... ....+ + ...++++++++ +|+|++++|-...+
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~--~~~~~-------~-~~~~l~ell~~---sDivslh~Plt~~T 208 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRED--LKEKG-------C-VYTSLDELLKE---SDVISLHVPYTKET 208 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHHTT-------C-EECCHHHHHHH---CSEEEECCCCCTTT
T ss_pred cEEEEECcchHHHHHHHhhcccCceeeecCCccchh--hhhcC-------c-eecCHHHHHhh---CCEEEEcCCCChhh
Confidence 579999999999999999999999999999876532 22211 2 34689999998 99999999998888
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCCCHH
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEE 135 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~ 135 (484)
+.++ .+.+..+++|.++|+++.+..-+...+.+.+++..+.....-|+-.|+
T Consensus 209 ~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EP 261 (334)
T 3kb6_A 209 HHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEE 261 (334)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHH
T ss_pred ccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCC
Confidence 8777 566778999999999999998889899998887655544445665554
No 154
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=98.60 E-value=7.1e-08 Score=101.49 Aligned_cols=117 Identities=9% Similarity=0.193 Sum_probs=87.9
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHH---HHHcCCCccchhhHHHHHHHHccCCCCCCcc
Q 011501 321 VDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELT---RIWKGGCIIRAIFLDRIKKAYDRNPDLANVL 397 (484)
Q Consensus 321 ~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~---~iW~~Gcii~s~ll~~i~~~~~~~~~~~~ll 397 (484)
.++++++|++||+++++.|+.++|++.+++++ .++|..++. ..|+.| .++|++++.....+.+++......
T Consensus 183 ~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~-----lGl~~~~~~~~~~~w~~g-~~~S~l~~~~~~~l~~~d~~~~~~ 256 (497)
T 2p4q_A 183 AGAGHYVKMVHNGIEYGDMQLICEAYDIMKRL-----GGFTDKEISDVFAKWNNG-VLDSFLVEITRDILKFDDVDGKPL 256 (497)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCCCHHHHHHHHHHHHTT-TTCBHHHHHHHHHHTCBCTTSSBG
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cCCCHHHHHHHHHHhcCC-ccccHHHHHHHHHHhcCCCCCccH
Confidence 47999999999999999999999999998862 237766555 558888 579999998777665532212234
Q ss_pred cchhHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHH--HHHhhcCCCc
Q 011501 398 VDPEFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLA--YFDTYRRERL 445 (484)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~--~~~~~~~~~~ 445 (484)
++...+...+|+++ +|++..|.++|+|+|.+..+++ +++.++.+|.
T Consensus 257 vd~i~D~~~~KgtG--~~~~~~A~~~Gv~~P~~~~av~ar~~s~~k~~r~ 304 (497)
T 2p4q_A 257 VEKIMDTAGQKGTG--KWTAINALDLGMPVTLIGEAVFARCLSALKNERI 304 (497)
T ss_dssp GGGSCCCCCCCSHH--HHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHhhccchHH--HHHHHHHHHcCCCCchHHHHHHHHHhhcchhhHH
Confidence 44444334456666 9999999999999999999985 6666665554
No 155
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=98.60 E-value=2.5e-07 Score=92.41 Aligned_cols=116 Identities=16% Similarity=0.198 Sum_probs=86.6
Q ss_pred CCCCeEEEEcccHHHH-HHHHHHHhCCCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecC
Q 011501 1 MVQTRIGLAGLAVMGQ-NLALNIAEKGFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~-~lA~~L~~~G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp 78 (484)
|.++||||||+|.+|. .++..|...+++| .++|+++++.+.+.+... ....+++++++++. ...|+|++|+|
T Consensus 2 M~~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~-----~~~~~~~~~~ll~~-~~~D~V~i~tp 75 (336)
T 2p2s_A 2 MKKIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFP-----SVPFAASAEQLITD-ASIDLIACAVI 75 (336)
T ss_dssp --CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHST-----TCCBCSCHHHHHTC-TTCCEEEECSC
T ss_pred CCccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcC-----CCcccCCHHHHhhC-CCCCEEEEeCC
Confidence 6678999999999996 6888887778885 689999999888876542 24568899999873 23899999999
Q ss_pred CCchHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHcCCeEE
Q 011501 79 AGSPVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAELGLLYL 126 (484)
Q Consensus 79 ~~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i 126 (484)
+..+.+.++..+ +.|+ ++++. .+..+.+.+++.+..++.|+.+.
T Consensus 76 ~~~h~~~~~~al----~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~ 121 (336)
T 2p2s_A 76 PCDRAELALRTL----DAGKDFFTAKPPLTTLEQLDAVQRRVAETGRKFA 121 (336)
T ss_dssp GGGHHHHHHHHH----HTTCEEEECSSCCSCHHHHHHHHHHHHHHCCCEE
T ss_pred hhhHHHHHHHHH----HCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 987766555433 3455 66664 45667788888888888887654
No 156
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.59 E-value=3.3e-07 Score=76.21 Aligned_cols=104 Identities=12% Similarity=0.080 Sum_probs=72.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCC-CcEEEEeCChhHHHHHHHHhhhcCCCCeee--cCCHhHHHhhcCCCcEEEEecCC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKG-FPISVYNRTTSKVDETVERAKQEGNLPLYG--FHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G-~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~--~~s~~e~~~~l~~advIi~~vp~ 79 (484)
+++|.|+|+|.||..++..|.+.| ++|.++||++++.+.+...+. .... ..+.+++.+.++.+|+||.++|.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~~d~vi~~~~~ 79 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGV-----ATKQVDAKDEAGLAKALGGFDAVISAAPF 79 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTC-----EEEECCTTCHHHHHHHTTTCSEEEECSCG
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCC-----cEEEecCCCHHHHHHHHcCCCEEEECCCc
Confidence 458999999999999999999999 999999999998877663221 1111 22344444445569999999976
Q ss_pred CchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHH
Q 011501 80 GSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQK 116 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~ 116 (484)
. ....+++.. ...|..++|.++.. ..++++.+
T Consensus 80 ~-~~~~~~~~~---~~~g~~~~~~~~~~-~~~~~~~~ 111 (118)
T 3ic5_A 80 F-LTPIIAKAA---KAAGAHYFDLTEDV-AATNAVRA 111 (118)
T ss_dssp G-GHHHHHHHH---HHTTCEEECCCSCH-HHHHHHHH
T ss_pred h-hhHHHHHHH---HHhCCCEEEecCcH-HHHHHHHH
Confidence 5 344444433 34677888887654 45555444
No 157
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.58 E-value=7.5e-08 Score=95.78 Aligned_cols=114 Identities=11% Similarity=0.111 Sum_probs=86.1
Q ss_pred CeEEEEcccHHHHHHHHHHHh--CCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 4 TRIGLAGLAVMGQNLALNIAE--KGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~--~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
.+|+|||+|.||..++..|.+ ...+|.+|||++++.+++.+..... +..+. +.++++++ . +|+|++|+|...
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~-~~~~~-~~~~~e~v-~---aDvVi~aTp~~~ 199 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDR-GISAS-VQPAEEAS-R---CDVLVTTTPSRK 199 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHT-TCCEE-ECCHHHHT-S---SSEEEECCCCSS
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhc-CceEE-ECCHHHHh-C---CCEEEEeeCCCC
Confidence 589999999999999999987 3468999999999999988764321 01255 78888888 7 999999999864
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
. ++. ...+++|..|++.++..|. ..++...+..++..|+|.+
T Consensus 200 p---v~~--~~~l~~G~~V~~ig~~~p~-~~el~~~~~~~a~v~vD~~ 241 (322)
T 1omo_A 200 P---VVK--AEWVEEGTHINAIGADGPG-KQELDVEILKKAKIVVDDL 241 (322)
T ss_dssp C---CBC--GGGCCTTCEEEECSCCSTT-CCCBCHHHHHTEEEEESCH
T ss_pred c---eec--HHHcCCCeEEEECCCCCCC-ccccCHHHHhcCeEEECCH
Confidence 2 221 2468899999999888776 3444444555556788864
No 158
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.56 E-value=3.7e-07 Score=91.50 Aligned_cols=114 Identities=14% Similarity=0.195 Sum_probs=84.6
Q ss_pred CCeEEEEcccHHHHHHHHHHH-h-CCCcEE-EEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 3 QTRIGLAGLAVMGQNLALNIA-E-KGFPIS-VYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~-~-~G~~V~-v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
++||||||+|.||..++..|. + .++++. ++|+++++.+.+.+.... ....+++++++++. ..+|+|++|+|+
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~----~~~~~~~~~~ll~~-~~~D~V~i~tp~ 76 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQL----NATVYPNDDSLLAD-ENVDAVLVTSWG 76 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTC----CCEEESSHHHHHHC-TTCCEEEECSCG
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCC----CCeeeCCHHHHhcC-CCCCEEEECCCc
Confidence 359999999999999999998 5 366755 889999998888765420 14678999999874 348999999999
Q ss_pred CchHHHHHHHHhhhcCCCC-EEEecC-CCChHHHHHHHHHHHHcCCeE
Q 011501 80 GSPVDQTIKTLSVYMEKGD-CIIDGG-NEWYENTERRQKAVAELGLLY 125 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~ 125 (484)
..+.+.+... +..|. ++++.- +..+.+++++.+..++.|..+
T Consensus 77 ~~h~~~~~~a----l~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 120 (344)
T 3mz0_A 77 PAHESSVLKA----IKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRL 120 (344)
T ss_dssp GGHHHHHHHH----HHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCC
T ss_pred hhHHHHHHHH----HHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEE
Confidence 8766655433 33444 555543 556778888888888877754
No 159
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.56 E-value=1e-07 Score=96.49 Aligned_cols=113 Identities=12% Similarity=0.131 Sum_probs=81.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeee-cCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYG-FHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~-~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
++|+|||+|.||..++..|++. ++|+++||++++++++.+.... +.. ..+.+++.+.++++|+||.|+|...+
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~-----~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~ 90 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATP-----LKVDASNFDKLVEVMKEFELVIGALPGFLG 90 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEE-----EECCTTCHHHHHHHHTTCSCEEECCCHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCe-----EEEecCCHHHHHHHHhCCCEEEECCChhhh
Confidence 5899999999999999999998 9999999999998887653210 111 12333333333449999999987633
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
..++. ..+..|..++|++... ..+.++.+..+++|+.++.
T Consensus 91 -~~v~~---a~l~~G~~~vD~s~~~-~~~~~l~~~Ak~aG~~~l~ 130 (365)
T 2z2v_A 91 -FKSIK---AAIKSKVDMVDVSFMP-ENPLELRDEAEKAQVTIVF 130 (365)
T ss_dssp -HHHHH---HHHHTTCCEEECCCCS-SCGGGGHHHHHHTTCEEEC
T ss_pred -HHHHH---HHHHhCCeEEEccCCc-HHHHHHHHHHHHcCCEEEE
Confidence 23433 3456889999998764 4556677778888988764
No 160
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.55 E-value=4.8e-07 Score=89.85 Aligned_cols=98 Identities=17% Similarity=0.290 Sum_probs=68.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC--cEEEEeCChhHHHHHHHHhhhc----CCCCeeecCCHhHHHhhcCCCcEEEEec
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKQE----GNLPLYGFHDPESFVHSIQKPRVIIMLV 77 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~~~~~~~~~----~~~~~~~~~s~~e~~~~l~~advIi~~v 77 (484)
|||+|||+|.||.++|..|+.+|+ +|.+||+++++++.+....... ....+.. ++. +.++. +|+||+++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~-~d~-~~~~~---aDvViiav 75 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA-GDY-ADLKG---SDVVIVAA 75 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE-CCG-GGGTT---CSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe-CCH-HHhCC---CCEEEEcc
Confidence 589999999999999999999999 9999999998877654321100 0001222 343 33444 99999999
Q ss_pred CCCch---------------HHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 78 KAGSP---------------VDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 78 p~~~~---------------v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
|.+.. ++++++.+.++. ++.++|..||..
T Consensus 76 ~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~ 119 (319)
T 1a5z_A 76 GVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPV 119 (319)
T ss_dssp CCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcH
Confidence 97642 456667777764 666777776643
No 161
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=98.55 E-value=1.2e-07 Score=99.37 Aligned_cols=117 Identities=18% Similarity=0.302 Sum_probs=89.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHH---HHHHcCCCccchhhHHHHHHHHcc-CCCCCCc
Q 011501 321 VDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGEL---TRIWKGGCIIRAIFLDRIKKAYDR-NPDLANV 396 (484)
Q Consensus 321 ~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i---~~iW~~Gcii~s~ll~~i~~~~~~-~~~~~~l 396 (484)
.++++++|++||+++++.++.++|++.+++++ .+++..++ +..|+.| .+.|++++.....+.+ +......
T Consensus 179 ~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~-----~Gl~~~~~~~l~~~w~~g-~~~s~l~~~~~~~l~~~d~~~g~~ 252 (474)
T 2iz1_A 179 NGAGHYVKMVHNGIEYGDMQLIAESYDLLKRI-----LGLSNAEIQAIFEEWNEG-ELDSYLIEITKEVLKRKDDEGEGY 252 (474)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SCCCHHHHHHHHHHHTTT-TTCBHHHHHHHHHTTCBCSSSSSB
T ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHhcCC-CccccHHHhhhhHhhcCCCCCChh
Confidence 47899999999999999999999999998862 23666554 4558988 5789999988787653 3222224
Q ss_pred ccchhHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHH--HHHhhcCCCc
Q 011501 397 LVDPEFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLA--YFDTYRRERL 445 (484)
Q Consensus 397 l~~~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~--~~~~~~~~~~ 445 (484)
.++.+.+...+|+++ +|++..|.++|+|+|.+..++. +++.++.+|.
T Consensus 253 ~vd~i~D~~~~k~tG--~~~~~~A~~~gv~~P~~~~av~ar~~s~~k~~r~ 301 (474)
T 2iz1_A 253 IVDKILDKAGNKGTG--KWTSESALDLGVPLPLITESVFARYISTYKDERV 301 (474)
T ss_dssp GGGGBCSCCCCCSHH--HHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHhhcccchH--HHHHHHHHHcCCCCchHHHHHHHHHhhhhhhhhH
Confidence 555555445556667 9999999999999999999985 6666665554
No 162
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.55 E-value=4.4e-07 Score=90.16 Aligned_cols=115 Identities=10% Similarity=0.170 Sum_probs=83.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhC-CCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 4 TRIGLAGLAVMGQNLALNIAEK-GFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
++|||||+|.||..++..|.+. ++++ .++|+++++.+.+.+... ....+.++++++ . ..+|+|++|+|+..
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~-----~~~~~~~~~~~l-~-~~~D~V~i~tp~~~ 74 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQ-----NIQLFDQLEVFF-K-SSFDLVYIASPNSL 74 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSS-----SCEEESCHHHHH-T-SSCSEEEECSCGGG
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcC-----CCeEeCCHHHHh-C-CCCCEEEEeCChHH
Confidence 5899999999999999999886 4665 589999998877655321 135678999988 1 23999999999886
Q ss_pred hHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 82 PVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
+.+.+... +..|+ ++++. .+....+.+++.+..++.|+.+..+.
T Consensus 75 h~~~~~~a----l~~gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~~~~ 120 (325)
T 2ho3_A 75 HFAQAKAA----LSAGKHVILEKPAVSQPQEWFDLIQTAEKNNCFIFEAA 120 (325)
T ss_dssp HHHHHHHH----HHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHH----HHcCCcEEEecCCcCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 55544332 33455 66664 45566788888888888887765543
No 163
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.54 E-value=7.2e-07 Score=88.87 Aligned_cols=99 Identities=13% Similarity=0.247 Sum_probs=69.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHH----hhhc-CCCCeeecCCHhHHHhhcCCCcEEEEe
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVER----AKQE-GNLPLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~----~~~~-~~~~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
++||+|||+|.||.++|..|+.+|+ +|.+||+++++++..... .... ...+++.+++. +.++. +|+||++
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~---aD~VI~a 89 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQN---SDVVIIT 89 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT---CSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCC---CCEEEEc
Confidence 3689999999999999999999999 999999999877643211 1000 01146666676 44454 9999999
Q ss_pred cCCCc---------------hHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 77 VKAGS---------------PVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 77 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
++.+. .++++++.+.++. ++.++|..||.
T Consensus 90 vg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP 133 (328)
T 2hjr_A 90 AGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICITNP 133 (328)
T ss_dssp CSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSS
T ss_pred CCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCc
Confidence 94432 1455666777765 67777777763
No 164
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.54 E-value=4.3e-07 Score=90.17 Aligned_cols=114 Identities=11% Similarity=0.063 Sum_probs=79.9
Q ss_pred CCeEEEEcccHHHH-HHHHHHHhC-CCcEEEEeCChhHHHHHHHHhhhcCCCCeee-cCCHhHHHhhcCCCcEEEEecCC
Q 011501 3 QTRIGLAGLAVMGQ-NLALNIAEK-GFPISVYNRTTSKVDETVERAKQEGNLPLYG-FHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 3 ~~~IgiIGlG~mG~-~lA~~L~~~-G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~-~~s~~e~~~~l~~advIi~~vp~ 79 (484)
++||||||+|.||. .++..|.+. +++|.++|+++++.+++.+... +.. +.+..+++. +.+|+|++|+|+
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g------~~~~~~~~~~~l~--~~~D~V~i~tp~ 73 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYR------VSATCTDYRDVLQ--YGVDAVMIHAAT 73 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTT------CCCCCSSTTGGGG--GCCSEEEECSCG
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcC------CCccccCHHHHhh--cCCCEEEEECCc
Confidence 46999999999998 599998875 6777799999999888776532 222 344444442 249999999998
Q ss_pred CchHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHcCCeEEec
Q 011501 80 GSPVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
..+.+.+...+ ..|+ ++++. .+..+.+.+++.+.+++.|+.+..+
T Consensus 74 ~~h~~~~~~al----~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 120 (323)
T 1xea_A 74 DVHSTLAAFFL----HLGIPTFVDKPLAASAQECENLYELAEKHHQPLYVG 120 (323)
T ss_dssp GGHHHHHHHHH----HTTCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred hhHHHHHHHHH----HCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCeEEEe
Confidence 86555443332 3454 66664 4556678888888888888765543
No 165
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.53 E-value=5.4e-07 Score=90.97 Aligned_cols=112 Identities=13% Similarity=0.179 Sum_probs=82.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC-CCcEE-EEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAG 80 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 80 (484)
+.||||||+|.||..++..|.+. +++|. ++|+++++.+.+ +. +++..+++++++++. ...|+|++|+|+.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a-~~------~g~~~~~~~~~ll~~-~~~D~V~i~tp~~ 76 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAA-AQ------KGLKIYESYEAVLAD-EKVDAVLIATPND 76 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHH-HT------TTCCBCSCHHHHHHC-TTCCEEEECSCGG
T ss_pred cCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHH-Hh------cCCceeCCHHHHhcC-CCCCEEEEcCCcH
Confidence 35899999999999999999886 66764 789999887543 21 136678999999873 2389999999998
Q ss_pred chHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHcCCeEE
Q 011501 81 SPVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAELGLLYL 126 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i 126 (484)
.+.+.+...+ ..|+ ++++. -+..+.+++++.+..++.|+.+.
T Consensus 77 ~h~~~~~~al----~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~ 120 (359)
T 3e18_A 77 SHKELAISAL----EAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFM 120 (359)
T ss_dssp GHHHHHHHHH----HTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHH----HCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 7666554333 3444 55553 24556788888888888887654
No 166
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.52 E-value=9.2e-07 Score=88.23 Aligned_cols=115 Identities=10% Similarity=0.152 Sum_probs=85.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCC---c-EEEEeCChhHHHHHHHHhhhcCCCCe-eecCCHhHHHhhcCCCcEEEEec
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGF---P-ISVYNRTTSKVDETVERAKQEGNLPL-YGFHDPESFVHSIQKPRVIIMLV 77 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~---~-V~v~dr~~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~l~~advIi~~v 77 (484)
++||||||+|.||..++..|.+.+. + |.++|+++++.+++.+... + ..+++++++++. ...|+|++|+
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~------~~~~~~~~~~ll~~-~~vD~V~i~t 74 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHD------IPKAYGSYEELAKD-PNVEVAYVGT 74 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHT------CSCEESSHHHHHHC-TTCCEEEECC
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcC------CCcccCCHHHHhcC-CCCCEEEECC
Confidence 4699999999999999999987642 3 5688999999988877643 3 468899999874 3489999999
Q ss_pred CCCchHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHcCCeEEec
Q 011501 78 KAGSPVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 78 p~~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
|+..+.+.+...+ ..|+ ++++. -+..+.+.+++.+..+++|+.+..+
T Consensus 75 p~~~H~~~~~~al----~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~ 123 (334)
T 3ohs_X 75 QHPQHKAAVMLCL----AAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEA 123 (334)
T ss_dssp CGGGHHHHHHHHH----HTTCEEEEESSSSSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CcHHHHHHHHHHH----hcCCEEEEECCCCCCHHHHHHHHHHHHHhCCEEEEE
Confidence 9987766554433 3444 56653 3456678888888888888766543
No 167
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.51 E-value=6.7e-07 Score=89.53 Aligned_cols=115 Identities=10% Similarity=0.205 Sum_probs=82.6
Q ss_pred CCeEEEEcccHHHHHHHHHHH-h-CCCc-EEEEeCChhHHHHHHHHhhhcCCCCe-eecCCHhHHHhhcCCCcEEEEecC
Q 011501 3 QTRIGLAGLAVMGQNLALNIA-E-KGFP-ISVYNRTTSKVDETVERAKQEGNLPL-YGFHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~-~-~G~~-V~v~dr~~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~l~~advIi~~vp 78 (484)
+++|||||+|.||..++..|. + .+++ |.++|+++++.+.+.+.. ++ ..+.+++++++. ..+|+|++|+|
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~------g~~~~~~~~~~~l~~-~~~D~V~i~tp 80 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNEL------GVETTYTNYKDMIDT-ENIDAIFIVAP 80 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTT------CCSEEESCHHHHHTT-SCCSEEEECSC
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHh------CCCcccCCHHHHhcC-CCCCEEEEeCC
Confidence 468999999999999999998 5 3676 468999999988776643 23 567899998863 23899999999
Q ss_pred CCchHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHc-CCeEEec
Q 011501 79 AGSPVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAEL-GLLYLGM 128 (484)
Q Consensus 79 ~~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~-g~~~i~~ 128 (484)
+..+.+.+... +..|. ++++. .+..+.+.+++.+..++. |+.+..+
T Consensus 81 ~~~h~~~~~~a----l~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~ 129 (346)
T 3cea_A 81 TPFHPEMTIYA----MNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSG 129 (346)
T ss_dssp GGGHHHHHHHH----HHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSCEECC
T ss_pred hHhHHHHHHHH----HHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEe
Confidence 98665554433 33455 55553 345566777777777777 7765543
No 168
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.51 E-value=9.9e-07 Score=87.73 Aligned_cols=115 Identities=13% Similarity=0.145 Sum_probs=84.5
Q ss_pred CeEEEEcccHHHHHH-HHHHHhCCCcEE-EEeCChhHHHHHHHHhhhcCCCCe-eecCCHhHHHhhcCCCcEEEEecCCC
Q 011501 4 TRIGLAGLAVMGQNL-ALNIAEKGFPIS-VYNRTTSKVDETVERAKQEGNLPL-YGFHDPESFVHSIQKPRVIIMLVKAG 80 (484)
Q Consensus 4 ~~IgiIGlG~mG~~l-A~~L~~~G~~V~-v~dr~~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~l~~advIi~~vp~~ 80 (484)
+||||||+|.||..+ +..|.+.+++|. ++|+++++.+.+.+... + ..+++++++++. ..+|+|++++|+.
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g------~~~~~~~~~~~l~~-~~~D~V~i~tp~~ 73 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENG------IGKSVTSVEELVGD-PDVDAVYVSTTNE 73 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTT------CSCCBSCHHHHHTC-TTCCEEEECSCGG
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcC------CCcccCCHHHHhcC-CCCCEEEEeCChh
Confidence 489999999999998 888888778764 88999999887776532 3 357889998763 2389999999988
Q ss_pred chHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 81 SPVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
.+.+.+... +..|+ ++++. .+..+.+.+++.+..+++|+.+..+.
T Consensus 74 ~h~~~~~~a----l~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~ 120 (332)
T 2glx_A 74 LHREQTLAA----IRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNH 120 (332)
T ss_dssp GHHHHHHHH----HHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECC
T ss_pred HhHHHHHHH----HHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEee
Confidence 655444332 33565 55653 45567788888888888888766554
No 169
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.49 E-value=3.1e-07 Score=92.77 Aligned_cols=114 Identities=11% Similarity=0.123 Sum_probs=82.1
Q ss_pred CCeEEEEcccHHHHH-HHHHHHhC-CCcEE-EEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 3 QTRIGLAGLAVMGQN-LALNIAEK-GFPIS-VYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
++||||||+|.||.. ++..|.+. +.+|. ++|+++++.+.+.+... ....+++++++++. ...|+|++|+|+
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~-----~~~~~~~~~~ll~~-~~vD~V~i~tp~ 78 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFIS-----DIPVLDNVPAMLNQ-VPLDAVVMAGPP 78 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSC-----SCCEESSHHHHHHH-SCCSEEEECSCH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcC-----CCcccCCHHHHhcC-CCCCEEEEcCCc
Confidence 468999999999985 88998876 66765 88999998877765421 24678899999986 236999999998
Q ss_pred CchHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHcCCeEE
Q 011501 80 GSPVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAELGLLYL 126 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i 126 (484)
..+.+.+... +..|+ ++++. -+..+.+++++.+..+++|+.+.
T Consensus 79 ~~H~~~~~~a----l~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~ 123 (359)
T 3m2t_A 79 QLHFEMGLLA----MSKGVNVFVEKPPCATLEELETLIDAARRSDVVSG 123 (359)
T ss_dssp HHHHHHHHHH----HHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHH----HHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 8665544433 33444 55553 24556778888888777776543
No 170
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.47 E-value=4.1e-07 Score=90.66 Aligned_cols=117 Identities=13% Similarity=0.168 Sum_probs=82.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCC-Cc-EEEEeCChhHHHHHHHHhhhcCCCCe-eecCCHhHHHhhcCCCcEEEEecC
Q 011501 2 VQTRIGLAGLAVMGQNLALNIAEKG-FP-ISVYNRTTSKVDETVERAKQEGNLPL-YGFHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 2 ~~~~IgiIGlG~mG~~lA~~L~~~G-~~-V~v~dr~~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~l~~advIi~~vp 78 (484)
.++||||||+|.||..++..|.+.+ .+ |.++|+++++.+.+.+.. ++ ..+.+++++++. ..+|+|++|+|
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~------~~~~~~~~~~~ll~~-~~~D~V~i~tp 76 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKY------HLPKAYDKLEDMLAD-ESIDVIYVATI 76 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CC------CCSCEESCHHHHHTC-TTCCEEEECSC
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHc------CCCcccCCHHHHhcC-CCCCEEEECCC
Confidence 3468999999999999999998764 44 458899999887776543 23 367899999873 23899999999
Q ss_pred CCchHHHHHHHHhhhcCCCC-EEEecC-CCChHHHHHHHHHHHHcCCeEEecc
Q 011501 79 AGSPVDQTIKTLSVYMEKGD-CIIDGG-NEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 79 ~~~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
+..+.+.+...+ ..|+ ++++.- +..+.+.+++.+..++.|+.+..+.
T Consensus 77 ~~~h~~~~~~al----~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~ 125 (329)
T 3evn_A 77 NQDHYKVAKAAL----LAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQ 125 (329)
T ss_dssp GGGHHHHHHHHH----HTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cHHHHHHHHHHH----HCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 986665544333 3444 555542 4566788888888888887665443
No 171
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=98.47 E-value=2.7e-07 Score=96.92 Aligned_cols=117 Identities=9% Similarity=0.147 Sum_probs=85.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHH---HcCCCccchhhHHHHHHHHccCCCCCCcc
Q 011501 321 VDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRI---WKGGCIIRAIFLDRIKKAYDRNPDLANVL 397 (484)
Q Consensus 321 ~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~i---W~~Gcii~s~ll~~i~~~~~~~~~~~~ll 397 (484)
.+.++++|++||+++++.|+.++|++.++++. .+++..++.++ |+.| .+.|++++.....+.+++......
T Consensus 176 ~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~-----~G~~~~~~~~~~~~w~~g-~~~S~l~~~~~~~l~~~d~~~~~~ 249 (482)
T 2pgd_A 176 DGAGHFVKMVHNGIEYGDMQLICEAYHLMKDV-----LGLGHKEMAKAFEEWNKT-ELDSFLIEITASILKFQDADGKHL 249 (482)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SCCCHHHHHHHHHHHTTT-TTCBHHHHHHHHHHHCBCTTSSBS
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcCHHHHHHHHHHhcCC-CcCchHHHHHhHHhhccCCCCCee
Confidence 47899999999999999999999999998863 13666655444 8888 478888888777665543222344
Q ss_pred cchhHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHH--HHHhhcCCCc
Q 011501 398 VDPEFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLA--YFDTYRRERL 445 (484)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~--~~~~~~~~~~ 445 (484)
++.+.+...+++++ +|++..|.++|+|+|.+.+++. +.+.++.+|.
T Consensus 250 ld~i~d~~~~k~t~--~~~~~~A~~~Gv~~P~i~~av~~~~~s~~k~~r~ 297 (482)
T 2pgd_A 250 LPKIRDSAGQKGTG--KWTAISALEYGVPVTLIGEAVFARCLSSLKDERI 297 (482)
T ss_dssp GGGSCCCCCCCSHH--HHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHHH
T ss_pred ecccccccccccHH--HHHHHHHHHcCCCcchHHHHHHHHhhhhhhhHHH
Confidence 44444444445555 9999999999999999987764 4455555443
No 172
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.45 E-value=3.6e-07 Score=90.45 Aligned_cols=134 Identities=14% Similarity=0.144 Sum_probs=92.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC-CCc-EEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEK-GFP-ISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAG 80 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~-G~~-V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 80 (484)
+++|||||+|.||..++..|.+. +++ |.++|+++++.+.+.+. +..+++++++++. ..+|+|++++|+.
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~--------~~~~~~~~~~l~~-~~~D~V~i~tp~~ 80 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG--------CVIESDWRSVVSA-PEVEAVIIATPPA 80 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT--------CEEESSTHHHHTC-TTCCEEEEESCGG
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh--------CcccCCHHHHhhC-CCCCEEEEeCChH
Confidence 46899999999999999999986 566 45899998876554332 3457788998852 2389999999998
Q ss_pred chHHHHHHHHhhhcCCCC-EEEe-cCCCChHHHHHHHHHHHHcCCeEEeccCCCCHHhhhcCCccccCCCHHHHHHHHHH
Q 011501 81 SPVDQTIKTLSVYMEKGD-CIID-GGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDI 158 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~-iiId-~st~~~~~~~~~~~~l~~~g~~~i~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~l 158 (484)
.+.+.+... ++.|+ ++++ -.+..+....++.+.+++.|+.+..+....- + ..+..++.+
T Consensus 81 ~h~~~~~~a----l~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~--------------~-p~~~~~~~~ 141 (315)
T 3c1a_A 81 THAEITLAA----IASGKAVLVEKPLTLDLAEAEAVAAAAKATGVMVWVEHTQLF--------------N-PAWEALKAD 141 (315)
T ss_dssp GHHHHHHHH----HHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCCEEEECGGGG--------------C-HHHHHHHHT
T ss_pred HHHHHHHHH----HHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEEeechhc--------------C-HHHHHHHHH
Confidence 655444332 33454 6666 3455677888888888888877655432211 1 135667777
Q ss_pred HHHHhc
Q 011501 159 LLKVAA 164 (484)
Q Consensus 159 l~~i~~ 164 (484)
++.+|.
T Consensus 142 i~~lG~ 147 (315)
T 3c1a_A 142 LTSIGP 147 (315)
T ss_dssp HHHHCS
T ss_pred HHHcCC
Confidence 776664
No 173
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.44 E-value=1.5e-06 Score=85.91 Aligned_cols=97 Identities=15% Similarity=0.149 Sum_probs=66.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhC--CCcEEEEeCChhHHHHHHHHhhh----c-CCCCeeecCCHhHHHhhcCCCcEEEEe
Q 011501 4 TRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKQ----E-GNLPLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~~~~~~~~----~-~~~~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
|||+|||+|.||.++|..|+.+ |++|.+||+++++++........ . ...++..++++++ ++. +|+||++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~---aDvViia 76 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TAN---SDIVIIT 76 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTT---CSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCC---CCEEEEe
Confidence 5899999999999999999985 79999999999887754321110 0 0012455567766 454 9999999
Q ss_pred cCCCc---------------hHHHHHHHHhhhcCCCCEEEecCC
Q 011501 77 VKAGS---------------PVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 77 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st 105 (484)
+|.+. .++++.+.+.++. ++.+|+..||
T Consensus 77 v~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~viv~tN 119 (310)
T 1guz_A 77 AGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-KNPIIIVVSN 119 (310)
T ss_dssp CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-SSCEEEECCS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEcC
Confidence 97642 1234456666664 5666666655
No 174
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=98.44 E-value=1.9e-07 Score=97.96 Aligned_cols=116 Identities=16% Similarity=0.254 Sum_probs=87.8
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHH---HHHHcCCCccchhhHHHHHHHHccCCCCCCcc
Q 011501 321 VDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGEL---TRIWKGGCIIRAIFLDRIKKAYDRNPDLANVL 397 (484)
Q Consensus 321 ~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i---~~iW~~Gcii~s~ll~~i~~~~~~~~~~~~ll 397 (484)
.++++++|+++|+++++.|+.++|++.+++++. + +|..++ +..|++| .+.|++++...+.+++.+......
T Consensus 188 ~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~l---G--l~~~~~~~l~~~w~~g-~~~s~l~~~~~~~l~~~d~~~~~~ 261 (480)
T 2zyd_A 188 DGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGL---N--LTNEELAQTFTEWNNG-ELSSYLIDITKDIFTKKDEDGNYL 261 (480)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---C--CCHHHHHHHHHHHHHT-TTCBHHHHHHHHHHHCBCTTSSBG
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---C--CCHHHHHHHHHHhcCC-CcccHHHHHHHHHHhcCCCCCcch
Confidence 479999999999999999999999999988721 3 666554 4568888 578999998888775432212244
Q ss_pred cchhHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHH--HHHhhcCCC
Q 011501 398 VDPEFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLA--YFDTYRRER 444 (484)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~--~~~~~~~~~ 444 (484)
++.+.+...+++++ +|++..|.+.|+|+|.+.+++. +++.++..|
T Consensus 262 v~~i~D~~~~k~tG--~~~~~~A~~~gv~~Pi~~~av~ar~~s~~k~~R 308 (480)
T 2zyd_A 262 VDVILDEAANKGTG--KWTSQSALDLGEPLSLITESVFARYISSLKDQR 308 (480)
T ss_dssp GGGBCCCCCCCSCT--THHHHHHHHHTCCCHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHhcCchHH--HHHHHHHHHcCCCCchHHHHHHHHhhhcchhhh
Confidence 44444444557777 9999999999999999999985 566655544
No 175
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.43 E-value=2.8e-07 Score=91.21 Aligned_cols=114 Identities=13% Similarity=0.179 Sum_probs=81.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhC--CCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 4 TRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
.+|+|||+|.||..++..|.+. ..+|.+|||+ +.+++.++.....+..+..+ ++++++.+ +|+|++|+|...
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~g~~~~~~-~~~eav~~---aDIVi~aT~s~~ 195 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRCGVPARMA-APADIAAQ---ADIVVTATRSTT 195 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHHTSCEEEC-CHHHHHHH---CSEEEECCCCSS
T ss_pred cEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhcCCeEEEe-CHHHHHhh---CCEEEEccCCCC
Confidence 5799999999999999999863 4589999999 55555543211001134566 99999988 999999999864
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcC-CeEEecc
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELG-LLYLGMG 129 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g-~~~i~~p 129 (484)
. ++. .+++++|.+|++.++..|.. +++...+-.+. ..|+|..
T Consensus 196 p---vl~--~~~l~~G~~V~~vGs~~p~~-~El~~~~~~~a~~v~vD~~ 238 (313)
T 3hdj_A 196 P---LFA--GQALRAGAFVGAIGSSLPHT-RELDDEALRRARAVVVEWR 238 (313)
T ss_dssp C---SSC--GGGCCTTCEEEECCCSSTTC-CCCCHHHHHHCSEEEESCH
T ss_pred c---ccC--HHHcCCCcEEEECCCCCCch-hhcCHHHHhcCCEEEECCH
Confidence 3 222 35688999999999988754 44444443343 4678843
No 176
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.42 E-value=2.1e-06 Score=85.65 Aligned_cols=99 Identities=11% Similarity=0.160 Sum_probs=71.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhh----cC-CCCeeecCCHhHHHhhcCCCcEEEEec
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQ----EG-NLPLYGFHDPESFVHSIQKPRVIIMLV 77 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~----~~-~~~~~~~~s~~e~~~~l~~advIi~~v 77 (484)
|||+|||+|.||.++|..|+.+|+ +|.+||+++++++........ .. ..+++.++++++.++. +|+||+++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~---aDiVi~a~ 86 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTG---ADCVIVTA 86 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTT---CSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCC---CCEEEEcc
Confidence 689999999999999999999998 999999999877663221100 00 1146667888876666 99999998
Q ss_pred --CCCc------------------hHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 78 --KAGS------------------PVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 78 --p~~~------------------~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
|... .++++.+.+.++. ++.++|..||.
T Consensus 87 g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP 134 (331)
T 1pzg_A 87 GLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNP 134 (331)
T ss_dssp SCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSS
T ss_pred CCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCc
Confidence 4321 1456667777765 67777777664
No 177
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.41 E-value=1.7e-06 Score=87.23 Aligned_cols=120 Identities=18% Similarity=0.158 Sum_probs=85.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC-CCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 2 VQTRIGLAGLAVMGQNLALNIAEK-GFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 2 ~~~~IgiIGlG~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
.+++|||||+|.||..++..|.+. ++++ .++|+++++.+.+.+..... .....+.+++++++. ..+|+|++++|+
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~--~~~~~~~~~~~ll~~-~~~D~V~i~tp~ 81 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYP--ESTKIHGSYESLLED-PEIDALYVPLPT 81 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCC--TTCEEESSHHHHHHC-TTCCEEEECCCG
T ss_pred CceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCC--CCCeeeCCHHHHhcC-CCCCEEEEcCCh
Confidence 356999999999999999999875 5555 68999999988877653200 013567899998863 238999999999
Q ss_pred CchHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHcCCeEEec
Q 011501 80 GSPVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
..+.+.+.. .+..|+ ++++. .+......+++.+..++.|+.+..+
T Consensus 82 ~~h~~~~~~----al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~~~~ 128 (362)
T 1ydw_A 82 SLHVEWAIK----AAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQIMDG 128 (362)
T ss_dssp GGHHHHHHH----HHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCEEEC
T ss_pred HHHHHHHHH----HHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 865544432 344565 45543 3456677888888888888876644
No 178
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.41 E-value=9.2e-07 Score=76.14 Aligned_cols=117 Identities=12% Similarity=0.177 Sum_probs=70.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeee-cCCHhHHHh-hcCCCcEEEEecCCC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYG-FHDPESFVH-SIQKPRVIIMLVKAG 80 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~-~~s~~e~~~-~l~~advIi~~vp~~ 80 (484)
+++|.|+|+|.+|..++..|.+.|++|.++|+++++.+.+.+.+.. -+.. ..+.+.+.+ .++++|+||.+++.+
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~----~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATH----AVIANATEENELLSLGIRNFEYVIVAIGAN 81 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSE----EEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCE----EEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence 4579999999999999999999999999999998877655432210 0111 123333222 134599999999876
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
......+...+..+.+..+|+..++. ... +.+.+.|...+-.|
T Consensus 82 ~~~~~~~~~~~~~~~~~~ii~~~~~~--~~~----~~l~~~g~~~vi~p 124 (144)
T 2hmt_A 82 IQASTLTTLLLKELDIPNIWVKAQNY--YHH----KVLEKIGADRIIHP 124 (144)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCSH--HHH----HHHHHHTCSEEECH
T ss_pred hHHHHHHHHHHHHcCCCeEEEEeCCH--HHH----HHHHHcCCCEEECc
Confidence 33333333334445555555444432 222 23444566554333
No 179
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.41 E-value=1.9e-06 Score=84.99 Aligned_cols=99 Identities=12% Similarity=0.226 Sum_probs=64.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC--cEEEEeCChhHHHHHHHHhhhcCCC--Ceeec-CCHhHHHhhcCCCcEEEEecC
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKQEGNL--PLYGF-HDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~~~~~~~~~~~~--~~~~~-~s~~e~~~~l~~advIi~~vp 78 (484)
|||+|||+|.||.++|..|+.+|+ +|.+||+++++++...........+ ..+.. ++. +.++ .+|+||++++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~-~a~~---~aDvVIi~~~ 76 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGH-SELA---DAQVVILTAG 76 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECG-GGGT---TCSEEEECC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCH-HHhC---CCCEEEEcCC
Confidence 589999999999999999999999 9999999988765433322110000 11222 233 3333 4999999996
Q ss_pred CCc---------------hHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 79 AGS---------------PVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 79 ~~~---------------~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
.+. .++++++.+.++ .++.+++..||..
T Consensus 77 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tNP~ 119 (304)
T 2v6b_A 77 ANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTSNPV 119 (304)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSSSH
T ss_pred CCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecCch
Confidence 553 235566777776 4777877776643
No 180
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.41 E-value=2.7e-06 Score=84.50 Aligned_cols=99 Identities=14% Similarity=0.132 Sum_probs=69.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhh----c-CCCCeeecCCHhHHHhhcCCCcEEEEe
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQ----E-GNLPLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~----~-~~~~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
++||+|||+|.||.++|..|+..|+ +|.++|+++++++........ . ...+++.+++. +.++. +|+||++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~---aD~Vi~a 79 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAG---ADVVIVT 79 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTT---CSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCC---CCEEEEe
Confidence 5699999999999999999999998 999999999877643222110 0 01145555676 44454 9999999
Q ss_pred cCCCc--------------------hHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 77 VKAGS--------------------PVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 77 vp~~~--------------------~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
++.+. .++++.+.+.++. ++.++|..||.
T Consensus 80 ~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP 128 (322)
T 1t2d_A 80 AGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNP 128 (322)
T ss_dssp CSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSS
T ss_pred CCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCC
Confidence 83321 2445556676665 67777777663
No 181
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.40 E-value=6.8e-07 Score=78.87 Aligned_cols=115 Identities=17% Similarity=0.158 Sum_probs=69.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHH-HHhhhcCCCCeee-cCCHhHHHh-hcCCCcEEEEecCCC
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETV-ERAKQEGNLPLYG-FHDPESFVH-SIQKPRVIIMLVKAG 80 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~-~~~~~~~~~~~~~-~~s~~e~~~-~l~~advIi~~vp~~ 80 (484)
++|.|+|+|.+|..++..|.+.|++|+++|+++++.+.+. ..+.. .+.. ..+.+.+.+ .++.+|+||++++++
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~----~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~ 95 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGF----TVVGDAAEFETLKECGMEKADMVFAFTNDD 95 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSE----EEESCTTSHHHHHTTTGGGCSEEEECSSCH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCc----EEEecCCCHHHHHHcCcccCCEEEEEeCCc
Confidence 6899999999999999999999999999999998876554 22110 0111 112322221 134599999999986
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
. ....+..+...+.+...++-..+.. ... +.+.+.|+. +-.|
T Consensus 96 ~-~~~~~~~~~~~~~~~~~iv~~~~~~-~~~----~~l~~~G~~-vi~p 137 (155)
T 2g1u_A 96 S-TNFFISMNARYMFNVENVIARVYDP-EKI----KIFEENGIK-TICP 137 (155)
T ss_dssp H-HHHHHHHHHHHTSCCSEEEEECSSG-GGH----HHHHTTTCE-EECH
T ss_pred H-HHHHHHHHHHHHCCCCeEEEEECCH-HHH----HHHHHCCCc-EEcH
Confidence 4 3434444444433444444433332 222 334456766 4433
No 182
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.39 E-value=1e-07 Score=92.61 Aligned_cols=111 Identities=17% Similarity=0.072 Sum_probs=76.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++.|||+|.||.+++..|++.|. +|+++||++++.+++.... ......++.+.+.. +|+||.++|.+..
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~------~~~~~~~~~~~~~~---aDiVInaTp~Gm~ 188 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNI------NKINLSHAESHLDE---FDIIINTTPAGMN 188 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCC------EEECHHHHHHTGGG---CSEEEECCC----
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhc------ccccHhhHHHHhcC---CCEEEECccCCCC
Confidence 579999999999999999999999 8999999998876654311 11222334444444 9999999998621
Q ss_pred --HHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 83 --VDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 83 --v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
....+ -...++++.+|+|+... |..| .+.+..+++|...++
T Consensus 189 ~~~~~~l--~~~~l~~~~~V~D~vY~-P~~T-~ll~~A~~~G~~~~~ 231 (277)
T 3don_A 189 GNTDSVI--SLNRLASHTLVSDIVYN-PYKT-PILIEAEQRGNPIYN 231 (277)
T ss_dssp ---CCSS--CCTTCCSSCEEEESCCS-SSSC-HHHHHHHHTTCCEEC
T ss_pred CCCcCCC--CHHHcCCCCEEEEecCC-CCCC-HHHHHHHHCcCEEeC
Confidence 11111 12357789999999887 4444 466777888876544
No 183
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=98.39 E-value=1.3e-06 Score=90.46 Aligned_cols=122 Identities=9% Similarity=0.101 Sum_probs=85.2
Q ss_pred CCCCeEEEEcccHHHH-HHHHHHHhC-CCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEec
Q 011501 1 MVQTRIGLAGLAVMGQ-NLALNIAEK-GFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLV 77 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~-~lA~~L~~~-G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~v 77 (484)
|.++||||||+|.||. .++..|.+. +++| .++|+++++.+.+.+..... ...+..+.+.+++++. ...|+|++|+
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~-~~~~~~~~~~~~ll~~-~~vD~V~iat 158 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVD-PRKIYDYSNFDKIAKD-PKIDAVYIIL 158 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCC-GGGEECSSSGGGGGGC-TTCCEEEECS
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCC-cccccccCCHHHHhcC-CCCCEEEEcC
Confidence 3456899999999997 899998875 4564 68999999988877653210 0002357889998863 2389999999
Q ss_pred CCCchHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHcCCeEEec
Q 011501 78 KAGSPVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 78 p~~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
|+..+.+.+... +..|+ ++++. .+....+.+++.+.+++.|+.+..+
T Consensus 159 p~~~h~~~~~~a----l~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~ 207 (433)
T 1h6d_A 159 PNSLHAEFAIRA----FKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIG 207 (433)
T ss_dssp CGGGHHHHHHHH----HHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred CchhHHHHHHHH----HHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCeEEEE
Confidence 998665555433 33454 66654 3456678888888888888766544
No 184
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.39 E-value=1.9e-06 Score=80.48 Aligned_cols=117 Identities=15% Similarity=0.158 Sum_probs=72.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeec-CCHhHHHh-hcCCCcEEEEecCCCc
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGF-HDPESFVH-SIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~-~s~~e~~~-~l~~advIi~~vp~~~ 81 (484)
|+|.|+|+|.+|..+|..|.+.|++|.++|+++++++.+.+..... -+... .+.+.+-+ .++++|+||++++++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~---~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d- 76 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKAT---IIHGDGSHKEILRDAEVSKNDVVVILTPRD- 76 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSE---EEESCTTSHHHHHHHTCCTTCEEEECCSCH-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCe---EEEcCCCCHHHHHhcCcccCCEEEEecCCc-
Confidence 5899999999999999999999999999999999988876532110 01111 22222222 256799999999886
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
.....+..++..+.+...+|-..+. +... +.+...|+..+-.|
T Consensus 77 ~~n~~~~~~a~~~~~~~~iia~~~~-~~~~----~~l~~~G~d~vi~p 119 (218)
T 3l4b_C 77 EVNLFIAQLVMKDFGVKRVVSLVND-PGNM----EIFKKMGITTVLNL 119 (218)
T ss_dssp HHHHHHHHHHHHTSCCCEEEECCCS-GGGH----HHHHHHTCEECCCH
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEeC-cchH----HHHHHCCCCEEECH
Confidence 4444444555443333334333322 2222 23345576654444
No 185
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.38 E-value=2.7e-07 Score=80.35 Aligned_cols=105 Identities=11% Similarity=0.120 Sum_probs=80.2
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhCCCcEEEEeCChhHH-HHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEec
Q 011501 3 QTRIGLAGL----AVMGQNLALNIAEKGFPISVYNRTTSKV-DETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLV 77 (484)
Q Consensus 3 ~~~IgiIGl----G~mG~~lA~~L~~~G~~V~v~dr~~~~~-~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~v 77 (484)
..+|+|||+ |.+|..++++|.+.||+ +|++|+.+. +++ . ++..+.|++|+.+. +|++++++
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~--v~~vnp~~~~~~i----~-----G~~~~~sl~el~~~---vDlavi~v 78 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGEEL----F-----GEEAVASLLDLKEP---VDILDVFR 78 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTSEE----T-----TEECBSSGGGCCSC---CSEEEECS
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCE--EEEeCCCcccCcC----C-----CEEecCCHHHCCCC---CCEEEEEe
Confidence 357999999 89999999999999997 777777641 111 0 36778899988775 99999999
Q ss_pred CCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 78 KAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 78 p~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
|+. .+.++++++...- .+.+|+..++. .+++.+.+++.|+.+++
T Consensus 79 p~~-~~~~v~~~~~~~g-i~~i~~~~g~~----~~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 79 PPS-ALMDHLPEVLALR-PGLVWLQSGIR----HPEFEKALKEAGIPVVA 122 (140)
T ss_dssp CHH-HHTTTHHHHHHHC-CSCEEECTTCC----CHHHHHHHHHTTCCEEE
T ss_pred CHH-HHHHHHHHHHHcC-CCEEEEcCCcC----HHHHHHHHHHcCCEEEc
Confidence 984 7788887777643 34677776654 25667777888999986
No 186
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.37 E-value=4.7e-07 Score=86.82 Aligned_cols=105 Identities=11% Similarity=0.115 Sum_probs=74.1
Q ss_pred eEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 5 RIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 5 ~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
+|+|||+|.||.+++..|++.|. +|+++||++++.+++.+.. +.....++.+.++. +|+||.++|.+..-
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~------~~~~~~~~~~~~~~---aDiVInatp~gm~p 180 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPV------KIFSLDQLDEVVKK---AKSLFNTTSVGMKG 180 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSC------EEEEGGGHHHHHHT---CSEEEECSSTTTTS
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc------ccCCHHHHHhhhcC---CCEEEECCCCCCCC
Confidence 79999999999999999999998 9999999999877665422 12234566666666 99999999864210
Q ss_pred -HHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCe
Q 011501 84 -DQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLL 124 (484)
Q Consensus 84 -~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 124 (484)
...+. ...+.++.+|+|.... +. .+.+...++|+.
T Consensus 181 ~~~~i~--~~~l~~~~~V~Divy~-~T---~ll~~A~~~G~~ 216 (253)
T 3u62_A 181 EELPVS--DDSLKNLSLVYDVIYF-DT---PLVVKARKLGVK 216 (253)
T ss_dssp CCCSCC--HHHHTTCSEEEECSSS-CC---HHHHHHHHHTCS
T ss_pred CCCCCC--HHHhCcCCEEEEeeCC-Cc---HHHHHHHHCCCc
Confidence 00110 1235689999998877 32 334444566765
No 187
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.36 E-value=7.8e-07 Score=92.40 Aligned_cols=99 Identities=9% Similarity=0.019 Sum_probs=76.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|+.+...|.+|++||+++.+..+....+ +. ..+++++++. +|+|++++....-+
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g-------~~-~~~l~ell~~---aDiVi~~~~t~~lI 326 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEG-------FN-VVTLDEIVDK---GDFFITCTGNVDVI 326 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTT-------CE-ECCHHHHTTT---CSEEEECCSSSSSB
T ss_pred CEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcC-------CE-ecCHHHHHhc---CCEEEECCChhhhc
Confidence 6899999999999999999999999999999987653333222 33 3578888877 99999997443222
Q ss_pred HHHHHHHhhhcCCCCEEEecCCCCh-HHHHHHHH
Q 011501 84 DQTIKTLSVYMEKGDCIIDGGNEWY-ENTERRQK 116 (484)
Q Consensus 84 ~~vl~~l~~~l~~g~iiId~st~~~-~~~~~~~~ 116 (484)
. .+.+..+++|.+|||+++... -+...+.+
T Consensus 327 ~---~~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 327 K---LEHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp C---HHHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred C---HHHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 1 355677899999999999987 37766665
No 188
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=98.34 E-value=4.9e-07 Score=87.21 Aligned_cols=109 Identities=19% Similarity=0.174 Sum_probs=77.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
+++.|||+|.||.+++..|++.|.+|+++||++++.+++. +.. +... +.+++. .+|+||.++|.+...
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~------~~~~-~~~~l~----~~DiVInaTp~Gm~~ 186 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG------CDCF-MEPPKS----AFDLIINATSASLHN 186 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT------CEEE-SSCCSS----CCSEEEECCTTCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC------CeEe-cHHHhc----cCCEEEEcccCCCCC
Confidence 5799999999999999999999999999999999998887 331 2222 333332 399999999976321
Q ss_pred HHHH--HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 84 DQTI--KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 84 ~~vl--~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
+..+ +.+...++++.+++|+... | .|. +.+..+++|...++
T Consensus 187 ~~~l~~~~l~~~l~~~~~v~D~vY~-P-~T~-ll~~A~~~G~~~~~ 229 (269)
T 3phh_A 187 ELPLNKEVLKGYFKEGKLAYDLAYG-F-LTP-FLSLAKELKTPFQD 229 (269)
T ss_dssp SCSSCHHHHHHHHHHCSEEEESCCS-S-CCH-HHHHHHHTTCCEEC
T ss_pred CCCCChHHHHhhCCCCCEEEEeCCC-C-chH-HHHHHHHCcCEEEC
Confidence 1111 1222245678999999886 4 443 66677788876554
No 189
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.34 E-value=3.9e-06 Score=82.87 Aligned_cols=98 Identities=15% Similarity=0.130 Sum_probs=65.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhh-----cCCCCeeecCCHhHHHhhcCCCcEEEEe
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQ-----EGNLPLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~-----~~~~~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
++||+|||+|.||.++|..|+..|+ +|.++|+++++++........ ....+++.+++. +.++. +|+||++
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~---aD~Vi~a 77 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTAN---SDVIVVT 77 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTT---CSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCC---CCEEEEc
Confidence 3699999999999999999999997 999999998877543322111 001135555666 44444 9999999
Q ss_pred cCCCc---------------hHHHHHHHHhhhcCCCCEEEecCC
Q 011501 77 VKAGS---------------PVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 77 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st 105 (484)
++.+. .++++.+.+..+. ++.+|+..||
T Consensus 78 ~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tN 120 (309)
T 1ur5_A 78 SGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIMVNN 120 (309)
T ss_dssp CCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECCS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcCC
Confidence 85542 1223445555554 6777777765
No 190
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.34 E-value=1.8e-06 Score=85.50 Aligned_cols=100 Identities=15% Similarity=0.254 Sum_probs=67.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCC--cEEEEeCChhHHHH--HH-HHhhhc-CCCCeeecCCHhHHHhhcCCCcEEEEe
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDE--TV-ERAKQE-GNLPLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~--~~-~~~~~~-~~~~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
+|||+|||+|.||..+|..|+.+|+ +|+++|+++++++. .. ..+... +...+....+.+ .++. +|+||++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~---aD~Vii~ 82 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPE-ICRD---ADMVVIT 82 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGG-GGTT---CSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHH-HhCC---CCEEEEC
Confidence 4699999999999999999999999 99999999877652 21 111100 000122223443 3343 9999999
Q ss_pred cCCCc---------------hHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 77 VKAGS---------------PVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 77 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
++.+. .+++++..+.++ .++.+|+..+|..
T Consensus 83 v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~ 127 (319)
T 1lld_A 83 AGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPV 127 (319)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCch
Confidence 96542 122566677765 5778888887754
No 191
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.34 E-value=4e-06 Score=84.01 Aligned_cols=116 Identities=13% Similarity=0.172 Sum_probs=83.0
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhC-CCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecC
Q 011501 2 VQTRIGLAGLAVMGQN-LALNIAEK-GFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 2 ~~~~IgiIGlG~mG~~-lA~~L~~~-G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp 78 (484)
+|+||||||+|.||.. ++..+.+. +.+| .++|+++++.+++.++... ...++|++++++. +..|+|++|+|
T Consensus 22 ~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~-----~~~y~d~~ell~~-~~iDaV~I~tP 95 (350)
T 4had_A 22 SMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSV-----PHAFGSYEEMLAS-DVIDAVYIPLP 95 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTC-----SEEESSHHHHHHC-SSCSEEEECSC
T ss_pred CccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCC-----CeeeCCHHHHhcC-CCCCEEEEeCC
Confidence 3569999999999976 46666665 5565 4789999999988876531 2568899999875 34899999999
Q ss_pred CCchHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHcCCeEEe
Q 011501 79 AGSPVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 79 ~~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
+..+.+.++..+. .|+ ++++- -+....+++++.+..++.|+.+.-
T Consensus 96 ~~~H~~~~~~al~----aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v 142 (350)
T 4had_A 96 TSQHIEWSIKAAD----AGKHVVCEKPLALKAGDIDAVIAARDRNKVVVTE 142 (350)
T ss_dssp GGGHHHHHHHHHH----TTCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEE
T ss_pred CchhHHHHHHHHh----cCCEEEEeCCcccchhhHHHHHHHHHHcCCceeE
Confidence 9977776655443 343 55552 123356788888888777765543
No 192
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=98.33 E-value=2.9e-06 Score=85.58 Aligned_cols=115 Identities=13% Similarity=0.213 Sum_probs=82.6
Q ss_pred CCCeEEEEcccHHHH-HHHHHHHhCCCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 2 VQTRIGLAGLAVMGQ-NLALNIAEKGFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 2 ~~~~IgiIGlG~mG~-~lA~~L~~~G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
.+.||||||+|.+|. .++..+...+.+| .++|+++++.+++.+... ....+++++++++. ...|+|++|+|+
T Consensus 25 ~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~-----~~~~~~~~~~ll~~-~~vD~V~I~tp~ 98 (361)
T 3u3x_A 25 DELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYA-----DARRIATAEEILED-ENIGLIVSAAVS 98 (361)
T ss_dssp -CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSS-----SCCEESCHHHHHTC-TTCCEEEECCCH
T ss_pred cCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcC-----CCcccCCHHHHhcC-CCCCEEEEeCCh
Confidence 346899999999995 5777777788874 588999999988877542 14578899999875 348999999999
Q ss_pred CchHHHHHHHHhhhcCCC-CEEEec-CCCChHHHHHHHHHHHHcCCeEE
Q 011501 80 GSPVDQTIKTLSVYMEKG-DCIIDG-GNEWYENTERRQKAVAELGLLYL 126 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g-~iiId~-st~~~~~~~~~~~~l~~~g~~~i 126 (484)
..+.+.+...+ ..| .++++- -+....+++++.+..++.|+.+.
T Consensus 99 ~~H~~~~~~al----~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~ 143 (361)
T 3u3x_A 99 SERAELAIRAM----QHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFS 143 (361)
T ss_dssp HHHHHHHHHHH----HTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEE
T ss_pred HHHHHHHHHHH----HCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 86655554433 344 355553 23456778888887777776543
No 193
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=98.31 E-value=4.5e-06 Score=86.65 Aligned_cols=120 Identities=15% Similarity=0.177 Sum_probs=84.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC-CCcE-EEEeCChhHHHHHHHHhhhcCCC-CeeecC----CHhHHHhhcCCCcEE
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEK-GFPI-SVYNRTTSKVDETVERAKQEGNL-PLYGFH----DPESFVHSIQKPRVI 73 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~~~~~~~~~~~~-~~~~~~----s~~e~~~~l~~advI 73 (484)
|.++||||||+|.||...+..|.+. +++| .++|+++++.+.+.+..... ++ ....++ +++++++. ...|+|
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~-g~~~~~~~~~~~~~~~~ll~~-~~vD~V 95 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKN-GKKPAKVFGNGNDDYKNMLKD-KNIDAV 95 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHT-TCCCCEEECSSTTTHHHHTTC-TTCCEE
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhc-CCCCCceeccCCCCHHHHhcC-CCCCEE
Confidence 3456899999999999999999875 5665 58999999988876532111 00 135566 89998874 238999
Q ss_pred EEecCCCchHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHcCCeEE
Q 011501 74 IMLVKAGSPVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAELGLLYL 126 (484)
Q Consensus 74 i~~vp~~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i 126 (484)
++|+|+..+.+.++..+ +.|+ ++++. -+....+.+++.+..++.|..+.
T Consensus 96 ~i~tp~~~h~~~~~~al----~aGkhV~~EKP~a~~~~ea~~l~~~a~~~g~~~~ 146 (444)
T 2ixa_A 96 FVSSPWEWHHEHGVAAM----KAGKIVGMEVSGAITLEECWDYVKVSEQTGVPLM 146 (444)
T ss_dssp EECCCGGGHHHHHHHHH----HTTCEEEECCCCCSSHHHHHHHHHHHHHHCCCEE
T ss_pred EEcCCcHHHHHHHHHHH----HCCCeEEEeCCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 99999987766555443 3454 55553 34456778888888887787654
No 194
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=98.30 E-value=5.7e-06 Score=84.26 Aligned_cols=115 Identities=11% Similarity=0.135 Sum_probs=85.7
Q ss_pred CCeEEEEccc-HHHHHHHHHHHhC-CCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 3 QTRIGLAGLA-VMGQNLALNIAEK-GFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 3 ~~~IgiIGlG-~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
++||||||+| .||..++..|.+. +++| .++|+++++.+++.+.. ++..+.|++++++. ...|+|++++|+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~------g~~~~~~~~ell~~-~~vD~V~i~tp~ 74 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEY------GIPVFATLAEMMQH-VQMDAVYIASPH 74 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHH------TCCEESSHHHHHHH-SCCSEEEECSCG
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHc------CCCeECCHHHHHcC-CCCCEEEEcCCc
Confidence 4699999999 9999999999876 4554 58899999988877654 25678999999875 348999999999
Q ss_pred CchHHHHHHHHhhhcCCCC-EEEecC-CCChHHHHHHHHHHHHcCCeEEec
Q 011501 80 GSPVDQTIKTLSVYMEKGD-CIIDGG-NEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
..+.+.+...+. .|+ ++++.- +.......++.+..+++|+.+..+
T Consensus 75 ~~H~~~~~~al~----aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~ 121 (387)
T 3moi_A 75 QFHCEHVVQASE----QGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVVG 121 (387)
T ss_dssp GGHHHHHHHHHH----TTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHH----CCCceeeeCCccCCHHHHHHHHHHHHHhCCeEEEE
Confidence 876665543333 344 555532 445678888888888888766543
No 195
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.30 E-value=1.4e-06 Score=90.87 Aligned_cols=100 Identities=10% Similarity=0.025 Sum_probs=75.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|||||+|.||..+|+.+...|.+|++||+++.+..+....+ +. ..+++++++. +|+|++++....-+
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G-------~~-~~~l~ell~~---aDiVi~~~~t~~lI 346 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEG-------YR-VVTMEYAADK---ADIFVTATGNYHVI 346 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTT-------CE-ECCHHHHTTT---CSEEEECSSSSCSB
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcC-------CE-eCCHHHHHhc---CCEEEECCCccccc
Confidence 6899999999999999999999999999999987643322211 33 3478888877 99999998543222
Q ss_pred HHHHHHHhhhcCCCCEEEecCCCChH-HHHHHHHHH
Q 011501 84 DQTIKTLSVYMEKGDCIIDGGNEWYE-NTERRQKAV 118 (484)
Q Consensus 84 ~~vl~~l~~~l~~g~iiId~st~~~~-~~~~~~~~l 118 (484)
. .+.+..+++|.+|||++..... +...+ +.+
T Consensus 347 ~---~~~l~~MK~gAilINvgrg~veID~~aL-~AL 378 (494)
T 3d64_A 347 N---HDHMKAMRHNAIVCNIGHFDSEIDVAST-RQY 378 (494)
T ss_dssp C---HHHHHHCCTTEEEEECSSSSCSBCCGGG-TTS
T ss_pred C---HHHHhhCCCCcEEEEcCCCcchhchHHH-Hhh
Confidence 1 3566778999999999998764 55555 444
No 196
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=98.30 E-value=1e-06 Score=92.40 Aligned_cols=116 Identities=16% Similarity=0.221 Sum_probs=84.8
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHH---HHHc-CCCccchhhHHHHHHHHccCCCCCCc
Q 011501 321 VDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELT---RIWK-GGCIIRAIFLDRIKKAYDRNPDLANV 396 (484)
Q Consensus 321 ~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~---~iW~-~Gcii~s~ll~~i~~~~~~~~~~~~l 396 (484)
.+.++++|++||++.+..++.++|.+.++++. + ++..++. ..|+ .| ...|++++.....+.+.+.....
T Consensus 178 ~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~----G--~~~~~~~~l~~~w~~~g-~~~s~l~~~~~~~l~~~d~~G~~ 250 (478)
T 1pgj_A 178 GGAGSCVKMYHNSGEYAILQIWGEVFDILRAM----G--LNNDEVAAVLEDWKSKN-FLKSYMLDISIAAARAKDKDGSY 250 (478)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----T--CCHHHHHHHHHHHHHTS-TTCBHHHHHHHHHHHCBCTTSSB
T ss_pred chHHHHHhhHHHHHHHHHHHHHHHHHHHHHHc----C--CCHHHHHHHHHHhccCC-CcCchHHHhhchhhhcCCCCChh
Confidence 47899999999999999999999999998853 3 6665544 4577 88 67898888877777542211113
Q ss_pred ccchhHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHH--HHHhhcCCCc
Q 011501 397 LVDPEFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLA--YFDTYRRERL 445 (484)
Q Consensus 397 l~~~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~--~~~~~~~~~~ 445 (484)
.++...+...+++++ +|++..|.++|+|+|.+.+++. +++..+.+|.
T Consensus 251 ~ld~i~D~~~~kgtg--~~~~~~A~~~Gv~~Pi~~~av~~r~ls~~~~~r~ 299 (478)
T 1pgj_A 251 LTEHVMDRIGSKGTG--LWSAQEALEIGVPAPSLNMAVVSRQFTMYKTERQ 299 (478)
T ss_dssp GGGGBCCCCCCCSHH--HHHHHHHHHHTCCCHHHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHhcCccHH--HHHHHHHHHhCCCChHHHHHHHHHHHhCCCCHHH
Confidence 444434333345555 9999999999999999999985 6666665543
No 197
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.29 E-value=8.2e-07 Score=77.62 Aligned_cols=105 Identities=14% Similarity=0.111 Sum_probs=77.8
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecC
Q 011501 3 QTRIGLAGL----AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 3 ~~~IgiIGl----G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp 78 (484)
..+|+|||+ |.+|..++.+|.+.||+ +|++|+.. +++ . ++..+.+++|+.+. +|++++++|
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~--v~~Vnp~~-~~i----~-----G~~~y~sl~~l~~~---vDlvvi~vp 86 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYD--VYPVNPKY-EEV----L-----GRKCYPSVLDIPDK---IEVVDLFVK 86 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTC-SEE----T-----TEECBSSGGGCSSC---CSEEEECSC
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCE--EEEECCCC-CeE----C-----CeeccCCHHHcCCC---CCEEEEEeC
Confidence 357999999 79999999999999997 56666553 111 1 36778899998765 999999999
Q ss_pred CCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEec
Q 011501 79 AGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 79 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
+. .+.++++++...- .+.+++..++. ..++.+.+++.|+.+++.
T Consensus 87 ~~-~~~~vv~~~~~~g-i~~i~~~~g~~----~~~l~~~a~~~Gi~vvGp 130 (144)
T 2d59_A 87 PK-LTMEYVEQAIKKG-AKVVWFQYNTY----NREASKKADEAGLIIVAN 130 (144)
T ss_dssp HH-HHHHHHHHHHHHT-CSEEEECTTCC----CHHHHHHHHHTTCEEEES
T ss_pred HH-HHHHHHHHHHHcC-CCEEEECCCch----HHHHHHHHHHcCCEEEcC
Confidence 85 7788887777643 34566554443 456677778889998863
No 198
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.29 E-value=1.4e-06 Score=85.87 Aligned_cols=108 Identities=17% Similarity=0.209 Sum_probs=66.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC-CCcEE-EEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 2 VQTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 2 ~~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
+++||||||+|.||..++..|.+. ++++. ++|+++++.+. .+. .....+++.+. ..+|+|++|+|+
T Consensus 8 ~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~---~g~-----~~~~~~~l~~~----~~~DvViiatp~ 75 (304)
T 3bio_A 8 KKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF---ELQ-----PFRVVSDIEQL----ESVDVALVCSPS 75 (304)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------CCT-----TSCEESSGGGS----SSCCEEEECSCH
T ss_pred CCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH---cCC-----CcCCHHHHHhC----CCCCEEEECCCc
Confidence 356899999999999999999874 66776 79999887543 111 11223344333 349999999998
Q ss_pred CchHHHHHHHHhhhcCCCCEEEecCCC---ChHHHHHHHHHHHHcCCeE
Q 011501 80 GSPVDQTIKTLSVYMEKGDCIIDGGNE---WYENTERRQKAVAELGLLY 125 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~iiId~st~---~~~~~~~~~~~l~~~g~~~ 125 (484)
..+.+.+ ...++.|..|++.... .+....++.+..++.|..+
T Consensus 76 ~~h~~~~----~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~ 120 (304)
T 3bio_A 76 REVERTA----LEILKKGICTADSFDIHDGILALRRSLGDAAGKSGAAA 120 (304)
T ss_dssp HHHHHHH----HHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCEE
T ss_pred hhhHHHH----HHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCEE
Confidence 7554333 2345568888886542 3444556666666777543
No 199
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=98.29 E-value=3.2e-06 Score=88.55 Aligned_cols=121 Identities=20% Similarity=0.219 Sum_probs=87.0
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhC--CCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEE
Q 011501 3 QTRIGLAGL----AVMGQNLALNIAEK--GFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIM 75 (484)
Q Consensus 3 ~~~IgiIGl----G~mG~~lA~~L~~~--G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~ 75 (484)
++||||||+ |.||..++..|.+. +++| .++|+++++.+.+.+..... ....+.+++++++. ...|+|++
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~---~~~~~~d~~ell~~-~~vD~V~I 114 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLK---HATGFDSLESFAQY-KDIDMIVV 114 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCT---TCEEESCHHHHHHC-TTCSEEEE
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCC---cceeeCCHHHHhcC-CCCCEEEE
Confidence 458999999 99999999999986 6665 58999999988887653210 12478899999863 23899999
Q ss_pred ecCCCchHHHHHHHHhhhcC---CCCEEEec-CCCChHHHHHHHHHHHHcC-CeEEe
Q 011501 76 LVKAGSPVDQTIKTLSVYME---KGDCIIDG-GNEWYENTERRQKAVAELG-LLYLG 127 (484)
Q Consensus 76 ~vp~~~~v~~vl~~l~~~l~---~g~iiId~-st~~~~~~~~~~~~l~~~g-~~~i~ 127 (484)
|+|+..+.+.++..+....+ ...++++. -+..+.+++++.+.+++.| +.+.-
T Consensus 115 ~tp~~~H~~~~~~al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g~~~~~v 171 (479)
T 2nvw_A 115 SVKVPEHYEVVKNILEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQRANLQTII 171 (479)
T ss_dssp CSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCTTCEEEE
T ss_pred cCCcHHHHHHHHHHHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEEE
Confidence 99998766655544433200 02477775 4556778888888888888 65543
No 200
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.29 E-value=8.4e-07 Score=89.44 Aligned_cols=99 Identities=13% Similarity=0.097 Sum_probs=67.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCC-----e-------------eecCCHhHHHh
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLP-----L-------------YGFHDPESFVH 65 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~-----~-------------~~~~s~~e~~~ 65 (484)
.+|+|||+|.||..+++.+...|.+|++||+++++.+.+.+.+...-.+. . ....++++.++
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l~ 264 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAIT 264 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHHHT
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHHh
Confidence 58999999999999999999999999999999998888766432100000 0 00112334444
Q ss_pred hcCCCcEEEEec--CCCchHHHHHHHHhhhcCCCCEEEecCC
Q 011501 66 SIQKPRVIIMLV--KAGSPVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 66 ~l~~advIi~~v--p~~~~v~~vl~~l~~~l~~g~iiId~st 105 (484)
.+|+||.++ |....-.-+-++....+++|.+|||++.
T Consensus 265 ---~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~ 303 (381)
T 3p2y_A 265 ---KFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAG 303 (381)
T ss_dssp ---TCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred ---cCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeC
Confidence 499999986 4321111112566777889999999874
No 201
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=98.27 E-value=5.7e-06 Score=83.09 Aligned_cols=111 Identities=17% Similarity=0.259 Sum_probs=81.0
Q ss_pred CCeEEEEcccHHHHH-HHHHHHhC-CCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 3 QTRIGLAGLAVMGQN-LALNIAEK-GFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~-lA~~L~~~-G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
+.||||||+|.||.. .+..+.+. +++| .++|+++++.+ +... ....+++++++++. ...|+|++|+|+
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~---~~~~-----~~~~~~~~~~ll~~-~~vD~V~i~tp~ 77 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH---ADWP-----AIPVVSDPQMLFND-PSIDLIVIPTPN 77 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH---TTCS-----SCCEESCHHHHHHC-SSCCEEEECSCT
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH---hhCC-----CCceECCHHHHhcC-CCCCEEEEeCCh
Confidence 358999999999997 77777765 6665 48899988765 1111 35678899999875 348999999999
Q ss_pred CchHHHHHHHHhhhcCCCC-EEEecC-CCChHHHHHHHHHHHHcCCeEE
Q 011501 80 GSPVDQTIKTLSVYMEKGD-CIIDGG-NEWYENTERRQKAVAELGLLYL 126 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~i 126 (484)
..+.+.+...+ ..|+ ++++.- +....+.+++.+..++.|+.+.
T Consensus 78 ~~H~~~~~~al----~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~ 122 (352)
T 3kux_A 78 DTHFPLAQSAL----AAGKHVVVDKPFTVTLSQANALKEHADDAGLLLS 122 (352)
T ss_dssp TTHHHHHHHHH----HTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHH----HCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 87766554443 3444 666644 5567788888888888887654
No 202
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=98.27 E-value=6.6e-06 Score=84.64 Aligned_cols=117 Identities=13% Similarity=0.203 Sum_probs=83.3
Q ss_pred CCeEEEEcccH---HHHHHHHHHHhCC-CcEE--EEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhc----CCCcE
Q 011501 3 QTRIGLAGLAV---MGQNLALNIAEKG-FPIS--VYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSI----QKPRV 72 (484)
Q Consensus 3 ~~~IgiIGlG~---mG~~lA~~L~~~G-~~V~--v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l----~~adv 72 (484)
+.||||||+|. ||...+..+...+ +++. ++|+++++.+++.++.... ....+++++++++.- ...|+
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~---~~~~~~~~~~ll~~~~~~~~~vD~ 113 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLD---PSRVYSDFKEMAIREAKLKNGIEA 113 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCC---GGGBCSCHHHHHHHHHHCTTCCSE
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCC---cccccCCHHHHHhcccccCCCCcE
Confidence 35899999999 9999998888776 5654 6899999998887754210 015688999998741 34899
Q ss_pred EEEecCCCchHHHHHHHHhhhcCCCC-EEEecC-CCChHHHHHHHHHHHHcCCeEE
Q 011501 73 IIMLVKAGSPVDQTIKTLSVYMEKGD-CIIDGG-NEWYENTERRQKAVAELGLLYL 126 (484)
Q Consensus 73 Ii~~vp~~~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~i 126 (484)
|++|+|+..+.+.+... +..|+ ++++.- +....+++++.+..++.|+.+.
T Consensus 114 V~I~tp~~~H~~~~~~a----l~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 165 (417)
T 3v5n_A 114 VAIVTPNHVHYAAAKEF----LKRGIHVICDKPLTSTLADAKKLKKAADESDALFV 165 (417)
T ss_dssp EEECSCTTSHHHHHHHH----HTTTCEEEEESSSCSSHHHHHHHHHHHHHCSSCEE
T ss_pred EEECCCcHHHHHHHHHH----HhCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 99999998776655433 33454 555532 4456788888888888887654
No 203
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.27 E-value=1.6e-06 Score=88.50 Aligned_cols=91 Identities=10% Similarity=0.041 Sum_probs=71.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|+|||+|.+|..+|+.|...|.+|++||+++.+.......+ +. ..+++++++. +|+|+++..+...+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G-------~~-~~sL~eal~~---ADVVilt~gt~~iI 280 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEG-------YQ-VLLVEDVVEE---AHIFVTTTGNDDII 280 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CE-ECCHHHHTTT---CSEEEECSSCSCSB
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhC-------Ce-ecCHHHHHhh---CCEEEECCCCcCcc
Confidence 5899999999999999999999999999999987765544332 23 3488898887 99999876544222
Q ss_pred HHHHHHHhhhcCCCCEEEecCCCCh
Q 011501 84 DQTIKTLSVYMEKGDCIIDGGNEWY 108 (484)
Q Consensus 84 ~~vl~~l~~~l~~g~iiId~st~~~ 108 (484)
. .+....+++|.+||+++...+
T Consensus 281 ~---~e~l~~MK~gAIVINvgRg~v 302 (436)
T 3h9u_A 281 T---SEHFPRMRDDAIVCNIGHFDT 302 (436)
T ss_dssp C---TTTGGGCCTTEEEEECSSSGG
T ss_pred C---HHHHhhcCCCcEEEEeCCCCC
Confidence 2 245677899999999998765
No 204
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.26 E-value=1.3e-06 Score=88.82 Aligned_cols=99 Identities=10% Similarity=0.058 Sum_probs=68.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCC---------ee-e------------cCCHh
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLP---------LY-G------------FHDPE 61 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~---------~~-~------------~~s~~ 61 (484)
.+|+|||+|.||..+++.+...|.+|++||+++++.+.+.+.+...-... .. . ..+++
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l~ 270 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALVA 270 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhHHH
Confidence 58999999999999999999999999999999998877765432100000 00 0 11345
Q ss_pred HHHhhcCCCcEEEEec--CCCchHHHHHHHHhhhcCCCCEEEecCC
Q 011501 62 SFVHSIQKPRVIIMLV--KAGSPVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 62 e~~~~l~~advIi~~v--p~~~~v~~vl~~l~~~l~~g~iiId~st 105 (484)
+.++. +|+||.++ |....-.-+-++....+++|.+|||++.
T Consensus 271 e~l~~---aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 271 EHIAK---QDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp HHHHT---CSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTG
T ss_pred HHhcC---CCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeC
Confidence 55555 99999986 3321111112567778999999999974
No 205
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=98.25 E-value=3.1e-06 Score=87.70 Aligned_cols=122 Identities=20% Similarity=0.207 Sum_probs=87.8
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhC--CCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEE
Q 011501 3 QTRIGLAGL----AVMGQNLALNIAEK--GFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIM 75 (484)
Q Consensus 3 ~~~IgiIGl----G~mG~~lA~~L~~~--G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~ 75 (484)
++||||||+ |.||..++..|.+. +++| .++|+++++.+.+.+..... .+..+.+++++++. ...|+|++
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~---~~~~~~~~~~ll~~-~~vD~V~i 95 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLS---NATAFPTLESFASS-STIDMIVI 95 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCT---TCEEESSHHHHHHC-SSCSEEEE
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCC---cceeeCCHHHHhcC-CCCCEEEE
Confidence 358999999 99999999999987 6665 68999999988877653210 13468899999873 23899999
Q ss_pred ecCCCchHHHHHHHHhhhc---CCCCEEEec-CCCChHHHHHHHHHHHHcCCeEEec
Q 011501 76 LVKAGSPVDQTIKTLSVYM---EKGDCIIDG-GNEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 76 ~vp~~~~v~~vl~~l~~~l---~~g~iiId~-st~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
|+|+..+.+.++..+.... +...++++. .+....+++++.+.+++.|+.+..+
T Consensus 96 ~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~ 152 (438)
T 3btv_A 96 AIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTIIS 152 (438)
T ss_dssp CSCHHHHHHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTTTCEEEEE
T ss_pred eCCcHHHHHHHHHHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 9999866665554443320 002577774 4556778888888888888765443
No 206
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.24 E-value=9.8e-06 Score=80.38 Aligned_cols=101 Identities=17% Similarity=0.222 Sum_probs=67.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHH----HHHHhhhc-CCCCeeecCCHhHHHhhcCCCcEEE
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDE----TVERAKQE-GNLPLYGFHDPESFVHSIQKPRVII 74 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~----~~~~~~~~-~~~~~~~~~s~~e~~~~l~~advIi 74 (484)
|.++||+|||+|.||.++|..|+..|+ +|.+||+++++++. +.+..... ...++..+++. +.++. +|+||
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~---aDiVI 80 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEG---ADVVI 80 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTT---CSEEE
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCC---CCEEE
Confidence 667899999999999999999999999 99999999987642 22211000 01134555665 44454 99999
Q ss_pred EecCCCc---------------hHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 75 MLVKAGS---------------PVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 75 ~~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
++.+.+. .++++.+.+..+. ++.+++..||-
T Consensus 81 iaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvtNP 126 (324)
T 3gvi_A 81 VTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA-PEAFVICITNP 126 (324)
T ss_dssp ECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSS
T ss_pred EccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEecCCC
Confidence 9975432 1233335555554 67788888864
No 207
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.24 E-value=7.1e-06 Score=82.85 Aligned_cols=110 Identities=15% Similarity=0.172 Sum_probs=78.7
Q ss_pred CeEEEEcccHHHHH-HHHHHHhC-CCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCC
Q 011501 4 TRIGLAGLAVMGQN-LALNIAEK-GFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAG 80 (484)
Q Consensus 4 ~~IgiIGlG~mG~~-lA~~L~~~-G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 80 (484)
.||||||+|.||.. .+..+.+. +++| .++|+++++.++ ... ....+++++++++. ...|+|++|+|+.
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~---~~~-----~~~~~~~~~~ll~~-~~~D~V~i~tp~~ 78 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKR---DLP-----DVTVIASPEAAVQH-PDVDLVVIASPNA 78 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHH---HCT-----TSEEESCHHHHHTC-TTCSEEEECSCGG
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHh---hCC-----CCcEECCHHHHhcC-CCCCEEEEeCChH
Confidence 58999999999997 66677665 6676 488999977542 211 35778999999873 2389999999998
Q ss_pred chHHHHHHHHhhhcCCCCEEEecC--CCChHHHHHHHHHHHHcCCeEE
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGG--NEWYENTERRQKAVAELGLLYL 126 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~s--t~~~~~~~~~~~~l~~~g~~~i 126 (484)
.+.+.+... +..|+-|+.-- +....+++++.+.+++.|+.+.
T Consensus 79 ~H~~~~~~a----l~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~ 122 (364)
T 3e82_A 79 THAPLARLA----LNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLS 122 (364)
T ss_dssp GHHHHHHHH----HHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHH----HHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 776655443 33455444433 4566788888888888887654
No 208
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.23 E-value=2.6e-06 Score=85.82 Aligned_cols=109 Identities=17% Similarity=0.213 Sum_probs=75.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|+|+|+|.||..+|+.|.+.|.+|+++|+++++++++.+... .... +.+++.. ..+|+++.|.....-.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~g------a~~v-~~~~ll~--~~~DIvip~a~~~~I~ 244 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEG------ADAV-APNAIYG--VTCDIFAPCALGAVLN 244 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC------CEEC-CGGGTTT--CCCSEEEECSCSCCBS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcC------CEEE-ChHHHhc--cCCcEeeccchHHHhC
Confidence 68999999999999999999999999999999998887766531 2333 4445443 1399999886554221
Q ss_pred HHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 84 DQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 84 ~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
... ++.+ ...+|++.++.. .+..+..+.+.++|+.|+.
T Consensus 245 ~~~----~~~l-g~~iV~e~An~p-~t~~ea~~~L~~~Gi~~~P 282 (364)
T 1leh_A 245 DFT----IPQL-KAKVIAGSADNQ-LKDPRHGKYLHELGIVYAP 282 (364)
T ss_dssp TTH----HHHC-CCSEECCSCSCC-BSSHHHHHHHHHHTCEECC
T ss_pred HHH----HHhC-CCcEEEeCCCCC-cccHHHHHHHHhCCCEEec
Confidence 222 2334 446677676664 3434566778888986653
No 209
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=98.22 E-value=7.5e-06 Score=82.45 Aligned_cols=111 Identities=16% Similarity=0.261 Sum_probs=78.7
Q ss_pred CCeEEEEcccHHHHH-HHHHHHhC-CCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 3 QTRIGLAGLAVMGQN-LALNIAEK-GFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~-lA~~L~~~-G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
++||||||+|.||.. .+..+.+. +++| .++|+++++. .+... ....+++++++++. ...|+|++|+|+
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~---~~~~~-----~~~~~~~~~~ll~~-~~vD~V~i~tp~ 75 (358)
T 3gdo_A 5 TIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEV---KRDFP-----DAEVVHELEEITND-PAIELVIVTTPS 75 (358)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHH---HHHCT-----TSEEESSTHHHHTC-TTCCEEEECSCT
T ss_pred cceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHH---HhhCC-----CCceECCHHHHhcC-CCCCEEEEcCCc
Confidence 468999999999997 67777665 6665 5789998763 22221 25678999999874 238999999999
Q ss_pred CchHHHHHHHHhhhcCCCC-EEEecC-CCChHHHHHHHHHHHHcCCeEE
Q 011501 80 GSPVDQTIKTLSVYMEKGD-CIIDGG-NEWYENTERRQKAVAELGLLYL 126 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~i 126 (484)
..+.+.+...+. .|+ ++++.- +....+++++.+..++.|+.+.
T Consensus 76 ~~H~~~~~~al~----aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~ 120 (358)
T 3gdo_A 76 GLHYEHTMACIQ----AGKHVVMEKPMTATAEEGETLKRAADEKGVLLS 120 (358)
T ss_dssp TTHHHHHHHHHH----TTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHH----cCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 977665554433 444 555532 4456788888888888777654
No 210
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=98.21 E-value=6.7e-06 Score=84.38 Aligned_cols=114 Identities=12% Similarity=0.119 Sum_probs=84.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhCC---------Cc-EEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEE
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKG---------FP-ISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVI 73 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G---------~~-V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advI 73 (484)
.||||||+|.||...+..+.+.+ .+ |.++|+++++++++.++... ...++|.+++++. ...|+|
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~-----~~~y~d~~~ll~~-~~vD~V 100 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGA-----EKAYGDWRELVND-PQVDVV 100 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTC-----SEEESSHHHHHHC-TTCCEE
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCC-----CeEECCHHHHhcC-CCCCEE
Confidence 48999999999999998887642 34 55789999999988876531 2578899999875 348999
Q ss_pred EEecCCCchHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHcCCeEEe
Q 011501 74 IMLVKAGSPVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 74 i~~vp~~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
++|+|+..+.+.++..+. .|+ ++++. -+....+++++.+..++.|+.+.-
T Consensus 101 ~I~tp~~~H~~~~~~al~----aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v 152 (412)
T 4gqa_A 101 DITSPNHLHYTMAMAAIA----AGKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMV 152 (412)
T ss_dssp EECSCGGGHHHHHHHHHH----TTCEEEEESCSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred EECCCcHHHHHHHHHHHH----cCCCeEeecCCcCCHHHHHHHHHHHHHhCCeeee
Confidence 999999987776655544 343 55552 233457788888877777776543
No 211
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=98.21 E-value=6.8e-06 Score=84.01 Aligned_cols=117 Identities=11% Similarity=0.049 Sum_probs=83.9
Q ss_pred CCeEEEEcccH---HHHHHHHHHHhCC-CcEE--EEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhc----CCCcE
Q 011501 3 QTRIGLAGLAV---MGQNLALNIAEKG-FPIS--VYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSI----QKPRV 72 (484)
Q Consensus 3 ~~~IgiIGlG~---mG~~lA~~L~~~G-~~V~--v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l----~~adv 72 (484)
+.||||||+|. ||...+..+...+ +++. ++|+++++.+++.++.... ....++|++++++.- ...|+
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~---~~~~~~~~~~ll~~~~~~~~~vD~ 88 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVD---SERCYADYLSMFEQEARRADGIQA 88 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCC---GGGBCSSHHHHHHHHTTCTTCCSE
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCC---cceeeCCHHHHHhcccccCCCCCE
Confidence 45899999999 9999998888765 5665 6799999988887654210 015788999998742 24899
Q ss_pred EEEecCCCchHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHcCCeEE
Q 011501 73 IIMLVKAGSPVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAELGLLYL 126 (484)
Q Consensus 73 Ii~~vp~~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i 126 (484)
|++|+|+..+.+.+...+. .|+ ++++. -+....+++++.+..++.|+.+.
T Consensus 89 V~i~tp~~~H~~~~~~al~----aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 140 (398)
T 3dty_A 89 VSIATPNGTHYSITKAALE----AGLHVVCEKPLCFTVEQAENLRELSHKHNRIVG 140 (398)
T ss_dssp EEEESCGGGHHHHHHHHHH----TTCEEEECSCSCSCHHHHHHHHHHHHHTTCCEE
T ss_pred EEECCCcHHHHHHHHHHHH----CCCeEEEeCCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 9999999877665544433 344 44442 23456788888888888887654
No 212
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.21 E-value=3.9e-06 Score=84.76 Aligned_cols=121 Identities=14% Similarity=0.167 Sum_probs=85.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeee-cCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYG-FHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~-~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
+|||.|||+|.+|+.++..|++ .++|.++|++.++++.+.+... .+.. ..+.+++.+.++++|+||.|+|...
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~-----~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~ 89 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFAT-----PLKVDASNFDKLVEVMKEFELVIGALPGFL 89 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSE-----EEECCTTCHHHHHHHHTTCSEEEECCCGGG
T ss_pred ccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCC-----cEEEecCCHHHHHHHHhCCCEEEEecCCcc
Confidence 4799999999999999999876 5899999999988877654221 1111 2355555555566999999998863
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe-ccCCCCH
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG-MGVSGGE 134 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~-~pv~gg~ 134 (484)
-..+++.. +..|.-++|.|-.. +...++.+..++.|+.++. +++..|.
T Consensus 90 -~~~v~~~~---~~~g~~yvD~s~~~-~~~~~l~~~a~~~g~~~i~~~G~~PG~ 138 (365)
T 3abi_A 90 -GFKSIKAA---IKSKVDMVDVSFMP-ENPLELRDEAEKAQVTIVFDAGFAPGL 138 (365)
T ss_dssp -HHHHHHHH---HHHTCEEEECCCCS-SCGGGGHHHHHHTTCEEECCCBTTTBH
T ss_pred -cchHHHHH---HhcCcceEeeeccc-hhhhhhhhhhccCCceeeecCCCCCch
Confidence 34454443 44678899988554 4556677777788887654 5655554
No 213
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.20 E-value=2.7e-06 Score=85.21 Aligned_cols=113 Identities=9% Similarity=0.165 Sum_probs=78.0
Q ss_pred CCeEEEEcccHHHHHHHHH-H-Hh-CCCcEE-EEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecC
Q 011501 3 QTRIGLAGLAVMGQNLALN-I-AE-KGFPIS-VYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~-L-~~-~G~~V~-v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp 78 (484)
++||||||+|.||..+... + .. .+++|. ++|+++++.+.+.+.. ++..++|++++++. ...|+|++|+|
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~------~~~~~~~~~~ll~~-~~~D~V~i~tp 74 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYS------HIHFTSDLDEVLND-PDVKLVVVCTH 74 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGT------TCEEESCTHHHHTC-TTEEEEEECSC
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcC------CCceECCHHHHhcC-CCCCEEEEcCC
Confidence 4699999999999975444 4 33 366765 8999988753322211 35778999999874 34799999999
Q ss_pred CCchHHHHHHHHhhhcCCCCEEEecC--CCChHHHHHHHHHHHHcCCeEE
Q 011501 79 AGSPVDQTIKTLSVYMEKGDCIIDGG--NEWYENTERRQKAVAELGLLYL 126 (484)
Q Consensus 79 ~~~~v~~vl~~l~~~l~~g~iiId~s--t~~~~~~~~~~~~l~~~g~~~i 126 (484)
+..+.+.+... +..|+-|+.-- +..+.+++++.+.++++|+.+.
T Consensus 75 ~~~h~~~~~~a----l~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~ 120 (345)
T 3f4l_A 75 ADSHFEYAKRA----LEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVT 120 (345)
T ss_dssp GGGHHHHHHHH----HHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred hHHHHHHHHHH----HHcCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 98776655433 34555555433 4456788888888888887664
No 214
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=98.20 E-value=1.3e-05 Score=80.03 Aligned_cols=115 Identities=17% Similarity=0.106 Sum_probs=83.7
Q ss_pred CCeEEEEccc-HHHHHHHHHHHhC--CCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecC
Q 011501 3 QTRIGLAGLA-VMGQNLALNIAEK--GFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 3 ~~~IgiIGlG-~mG~~lA~~L~~~--G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp 78 (484)
+.||||||+| .||...+..|.+. ++++ .++|+++++.+++.++... ...++|++++++. ...|+|++|+|
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~-----~~~~~~~~~ll~~-~~vD~V~i~tp 91 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGN-----PAVFDSYEELLES-GLVDAVDLTLP 91 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSS-----CEEESCHHHHHHS-SCCSEEEECCC
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCC-----CcccCCHHHHhcC-CCCCEEEEeCC
Confidence 3589999999 8999999999876 4555 6899999999888765421 2678899999874 34899999999
Q ss_pred CCchHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHcCCeEEe
Q 011501 79 AGSPVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 79 ~~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
+..+.+.+...+ ..|+ ++++. -+....+.+++.+..++.|+.+..
T Consensus 92 ~~~H~~~~~~al----~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v 138 (340)
T 1zh8_A 92 VELNLPFIEKAL----RKGVHVICEKPISTDVETGKKVVELSEKSEKTVYI 138 (340)
T ss_dssp GGGHHHHHHHHH----HTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEE
T ss_pred chHHHHHHHHHH----HCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 987655544333 3444 55553 234567777888877777775543
No 215
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.20 E-value=4.8e-06 Score=79.12 Aligned_cols=87 Identities=20% Similarity=0.157 Sum_probs=60.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCcEE-EEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKGFPIS-VYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G~~V~-v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
|+|+||+|+|+|.||+.++..+.+.++++. ++|++++. . . ++..+++++++. . +|+||-+.++
T Consensus 1 M~MmkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~-----~----~---gv~v~~dl~~l~-~---~DVvIDft~p 64 (243)
T 3qy9_A 1 MASMKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA-----T----T---PYQQYQHIADVK-G---ADVAIDFSNP 64 (243)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-----------C---CSCBCSCTTTCT-T---CSEEEECSCH
T ss_pred CCceEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc-----c----C---CCceeCCHHHHh-C---CCEEEEeCCh
Confidence 777899999999999999999998877654 47988762 1 1 356778888876 5 9999855433
Q ss_pred CchHHHHHHHHhhhcCCCCEEEecCCCChH
Q 011501 80 GSPVDQTIKTLSVYMEKGDCIIDGGNEWYE 109 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~ 109 (484)
. .+...+ . +..|.-+|.++|....
T Consensus 65 ~-a~~~~~----~-l~~g~~vVigTTG~s~ 88 (243)
T 3qy9_A 65 N-LLFPLL----D-EDFHLPLVVATTGEKE 88 (243)
T ss_dssp H-HHHHHH----T-SCCCCCEEECCCSSHH
T ss_pred H-HHHHHH----H-HhcCCceEeCCCCCCH
Confidence 2 333333 2 6677777777777533
No 216
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.20 E-value=1.6e-05 Score=78.85 Aligned_cols=101 Identities=15% Similarity=0.142 Sum_probs=67.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhhc-----CCCCeeecCCHhHHHhhcCCCcEEE
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQE-----GNLPLYGFHDPESFVHSIQKPRVII 74 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~~-----~~~~~~~~~s~~e~~~~l~~advIi 74 (484)
|.++||+|||+|.||.++|..|+..|+ +|.++|+++++++......... ...++..+.+. +.++. +|+||
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~-~a~~~---aDvVI 78 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDY-KDLEN---SDVVI 78 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTT---CSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCH-HHHCC---CCEEE
Confidence 667899999999999999999999988 9999999998765332211110 01134444554 34444 99999
Q ss_pred EecCCCc---------------hHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 75 MLVKAGS---------------PVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 75 ~~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
++.+.+. .++++++.+..+. ++.+++..||-
T Consensus 79 i~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtNP 124 (321)
T 3p7m_A 79 VTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC-PNAFVICITNP 124 (321)
T ss_dssp ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSS
T ss_pred EcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEecCc
Confidence 9975441 1233445555554 66777777653
No 217
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=98.19 E-value=7.2e-06 Score=83.05 Aligned_cols=113 Identities=15% Similarity=0.126 Sum_probs=80.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhC--------CCc-EEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEE
Q 011501 4 TRIGLAGLAVMGQNLALNIAEK--------GFP-ISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVII 74 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~--------G~~-V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi 74 (484)
-||||||+|.||...+..+... +.+ |.++|+++++.+++.++... ...++|.+++++. ++.|+|+
T Consensus 26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~-----~~~y~d~~ell~~-~~iDaV~ 99 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGF-----EKATADWRALIAD-PEVDVVS 99 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTC-----SEEESCHHHHHHC-TTCCEEE
T ss_pred ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCC-----CeecCCHHHHhcC-CCCcEEE
Confidence 4799999999999887776542 344 56889999999988876531 2578899999875 3489999
Q ss_pred EecCCCchHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHcCCeEE
Q 011501 75 MLVKAGSPVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAELGLLYL 126 (484)
Q Consensus 75 ~~vp~~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i 126 (484)
+|+|+..+.+.++..+. .|+ ++++- -+....+++++.+..++.|+.+.
T Consensus 100 IatP~~~H~~~a~~al~----aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~ 149 (393)
T 4fb5_A 100 VTTPNQFHAEMAIAALE----AGKHVWCEKPMAPAYADAERMLATAERSGKVAA 149 (393)
T ss_dssp ECSCGGGHHHHHHHHHH----TTCEEEECSCSCSSHHHHHHHHHHHHHSSSCEE
T ss_pred ECCChHHHHHHHHHHHh----cCCeEEEccCCcccHHHHHHhhhhHHhcCCccc
Confidence 99999988776655544 343 55552 23345778888888888877553
No 218
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.19 E-value=2.6e-05 Score=68.35 Aligned_cols=119 Identities=13% Similarity=0.161 Sum_probs=74.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCC-hhHHHHHHHHhhhcCCCCe-eec-CCHhHHHh-hcCCCcEEEEe
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRT-TSKVDETVERAKQEGNLPL-YGF-HDPESFVH-SIQKPRVIIML 76 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~-~~~~~~~~~~~~~~~~~~~-~~~-~s~~e~~~-~l~~advIi~~ 76 (484)
|..++|.|+|+|.+|..++..|.+.|++|+++|++ +++.+.+...... +..+ ... .+.+.+.+ .++++|.||++
T Consensus 1 ~~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~--~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (153)
T 1id1_A 1 HRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD--NADVIPGDSNDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT--TCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcC--CCeEEEcCCCCHHHHHHcChhhCCEEEEe
Confidence 66678999999999999999999999999999998 4655555432211 0111 111 23333322 25679999999
Q ss_pred cCCCchHHHHHHHHhhhc-CCCCEEEecCCCChHHHHHHHHHHHHcCCeEEec
Q 011501 77 VKAGSPVDQTIKTLSVYM-EKGDCIIDGGNEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 77 vp~~~~v~~vl~~l~~~l-~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
++++ .....+...+..+ +...+|+...+.. .. +.+...|+..+-.
T Consensus 79 ~~~d-~~n~~~~~~a~~~~~~~~ii~~~~~~~--~~----~~l~~~G~~~vi~ 124 (153)
T 1id1_A 79 SDND-ADNAFVVLSAKDMSSDVKTVLAVSDSK--NL----NKIKMVHPDIILS 124 (153)
T ss_dssp SSCH-HHHHHHHHHHHHHTSSSCEEEECSSGG--GH----HHHHTTCCSEEEC
T ss_pred cCCh-HHHHHHHHHHHHHCCCCEEEEEECCHH--HH----HHHHHcCCCEEEc
Confidence 9886 4444444444444 4456776665543 22 2344567654433
No 219
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=98.19 E-value=2.7e-06 Score=82.79 Aligned_cols=114 Identities=18% Similarity=0.106 Sum_probs=79.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++.|+|+|.||.+++..|++.|. +|+++||++++.+++.+.....+ .+.. .+.+++.. .+|+||.++|.+..
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~--~~~~-~~~~~l~~---~aDiIInaTp~gm~ 200 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG--EVKA-QAFEQLKQ---SYDVIINSTSASLD 200 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS--CEEE-EEGGGCCS---CEEEEEECSCCCC-
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC--CeeE-eeHHHhcC---CCCEEEEcCcCCCC
Confidence 579999999999999999999996 99999999999988877654211 1222 24455443 49999999998843
Q ss_pred HHHH-HHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCe-EEe
Q 011501 83 VDQT-IKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLL-YLG 127 (484)
Q Consensus 83 v~~v-l~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~-~i~ 127 (484)
.+.. +. ...+.++.+|+|+...+ ..|. +.+..+++|.. .++
T Consensus 201 ~~~~~l~--~~~l~~~~~V~DlvY~P-~~T~-ll~~A~~~G~~~~~~ 243 (281)
T 3o8q_A 201 GELPAID--PVIFSSRSVCYDMMYGK-GYTV-FNQWARQHGCAQAID 243 (281)
T ss_dssp ---CSCC--GGGEEEEEEEEESCCCS-SCCH-HHHHHHHTTCSEEEC
T ss_pred CCCCCCC--HHHhCcCCEEEEecCCC-ccCH-HHHHHHHCCCCEEEC
Confidence 2211 10 13466789999998764 4443 44667778875 443
No 220
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.18 E-value=1.4e-05 Score=83.17 Aligned_cols=76 Identities=16% Similarity=0.277 Sum_probs=54.8
Q ss_pred CCCCeEEEEcccHH--HHHHHHHHHhC----CCcEEEEeCChhHHHHHHHHhhh---cC--CCCeeecCCHhHHHhhcCC
Q 011501 1 MVQTRIGLAGLAVM--GQNLALNIAEK----GFPISVYNRTTSKVDETVERAKQ---EG--NLPLYGFHDPESFVHSIQK 69 (484)
Q Consensus 1 M~~~~IgiIGlG~m--G~~lA~~L~~~----G~~V~v~dr~~~~~~~~~~~~~~---~~--~~~~~~~~s~~e~~~~l~~ 69 (484)
|+++||+|||+|.| |.++|..|+.. |++|.+||+++++++........ .. ..+++.++++++.++.
T Consensus 1 m~~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~d--- 77 (480)
T 1obb_A 1 MPSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIID--- 77 (480)
T ss_dssp -CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTT---
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCC---
Confidence 66789999999997 56667788754 89999999999887654332110 00 1146667788777776
Q ss_pred CcEEEEecCC
Q 011501 70 PRVIIMLVKA 79 (484)
Q Consensus 70 advIi~~vp~ 79 (484)
||+||+++|.
T Consensus 78 AD~VIiaagv 87 (480)
T 1obb_A 78 ADFVINTAMV 87 (480)
T ss_dssp CSEEEECCCT
T ss_pred CCEEEECCCc
Confidence 9999999975
No 221
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.16 E-value=1.4e-05 Score=79.11 Aligned_cols=100 Identities=13% Similarity=0.148 Sum_probs=64.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCC--cEEEEeCChhHHHHHHHH---hhhcCCCCeeecCCHhHHHhhcCCCcEEEEe
Q 011501 2 VQTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVER---AKQEGNLPLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 2 ~~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~~~~~---~~~~~~~~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
+++||+|||+|.+|.+++..|+..|. +|.++|+++++++..... .....+..+....+..+.++. +|+||++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~---aDvVvi~ 81 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHD---ADLVVIC 81 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTT---CSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCC---CCEEEEC
Confidence 45699999999999999999998884 899999998776542211 110000122333233444444 9999999
Q ss_pred cCCCc---------------hHHHHHHHHhhhcCCCCEEEecCC
Q 011501 77 VKAGS---------------PVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 77 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st 105 (484)
++.+. .++++.+.+.++ .++.+||..||
T Consensus 82 ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tN 124 (317)
T 3d0o_A 82 AGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVATN 124 (317)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSS
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecC
Confidence 97652 133344555555 57777777664
No 222
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=98.14 E-value=2.8e-06 Score=82.34 Aligned_cols=117 Identities=21% Similarity=0.161 Sum_probs=76.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
.+++.|+|+|.||.+++..|++.|.+|+++||++++.+++.+.....+ .+.. .+++++.+ ..+|+||.++|.+..
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~--~~~~-~~~~~~~~--~~~DivIn~t~~~~~ 193 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG--NIQA-VSMDSIPL--QTYDLVINATSAGLS 193 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS--CEEE-EEGGGCCC--SCCSEEEECCCC---
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC--CeEE-eeHHHhcc--CCCCEEEECCCCCCC
Confidence 358999999999999999999999999999999999888876542110 1222 23333322 249999999998743
Q ss_pred HHHHHHHHh-hhcCCCCEEEecCCCChHHHHHHHHHHHHcCCe-EEe
Q 011501 83 VDQTIKTLS-VYMEKGDCIIDGGNEWYENTERRQKAVAELGLL-YLG 127 (484)
Q Consensus 83 v~~vl~~l~-~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~-~i~ 127 (484)
. .+. .+. ..+.++.+++|++......+. +.+..+++|.. +++
T Consensus 194 ~-~~~-~i~~~~l~~~~~v~D~~y~p~~~t~-ll~~a~~~G~~~~v~ 237 (272)
T 1p77_A 194 G-GTA-SVDAEILKLGSAFYDMQYAKGTDTP-FIALCKSLGLTNVSD 237 (272)
T ss_dssp ------CCCHHHHHHCSCEEESCCCTTSCCH-HHHHHHHTTCCCEEC
T ss_pred C-CCC-CCCHHHcCCCCEEEEeeCCCCcCCH-HHHHHHHcCCCEeeC
Confidence 2 110 111 124568899999986543243 45566777876 654
No 223
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=98.13 E-value=1.2e-05 Score=81.18 Aligned_cols=117 Identities=15% Similarity=0.105 Sum_probs=80.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCC--------Cc-EEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCc
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKG--------FP-ISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPR 71 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G--------~~-V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~ad 71 (484)
|++-||||||+|.||...+..+.... .+ |.++|+++++.+.+.++... ...++|.+++++. ...|
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~-----~~~~~d~~~ll~~-~~iD 77 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGW-----STTETDWRTLLER-DDVQ 77 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTC-----SEEESCHHHHTTC-TTCS
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCC-----CcccCCHHHHhcC-CCCC
Confidence 44458999999999999888877532 13 56889999999888876531 2567899999875 3489
Q ss_pred EEEEecCCCchHHHHHHHHhhhcCCCCEEEec-CCCChHHHHHHHH---HHHHcCCeEE
Q 011501 72 VIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDG-GNEWYENTERRQK---AVAELGLLYL 126 (484)
Q Consensus 72 vIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~-st~~~~~~~~~~~---~l~~~g~~~i 126 (484)
+|++|+|+..+.+.++..+... ..+++.- -+....+++++.+ ...+.|+.+.
T Consensus 78 aV~I~tP~~~H~~~~~~al~aG---khVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~ 133 (390)
T 4h3v_A 78 LVDVCTPGDSHAEIAIAALEAG---KHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRSM 133 (390)
T ss_dssp EEEECSCGGGHHHHHHHHHHTT---CEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCEE
T ss_pred EEEEeCChHHHHHHHHHHHHcC---CCceeecCcccchhHHHHHHHHHHHHHhcCCceE
Confidence 9999999998877766555432 2355552 2233467777743 3555666443
No 224
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=98.13 E-value=6e-06 Score=83.28 Aligned_cols=111 Identities=15% Similarity=0.188 Sum_probs=79.1
Q ss_pred CCeEEEEcccHHHHH-HHHHHHhC-CCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 3 QTRIGLAGLAVMGQN-LALNIAEK-GFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~-lA~~L~~~-G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
+.||||||+|.||.. .+..|.+. +++| .++|+++++.. +... ....+++++++++. ...|+|++|+|+
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~---~~~~-----~~~~~~~~~~ll~~-~~vD~V~i~tp~ 75 (362)
T 3fhl_A 5 IIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSK---ERYP-----QASIVRSFKELTED-PEIDLIVVNTPD 75 (362)
T ss_dssp CEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGG---TTCT-----TSEEESCSHHHHTC-TTCCEEEECSCG
T ss_pred ceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH---HhCC-----CCceECCHHHHhcC-CCCCEEEEeCCh
Confidence 458999999999997 67777765 6666 47899987632 2111 35778999999875 348999999999
Q ss_pred CchHHHHHHHHhhhcCCC-CEEEecC-CCChHHHHHHHHHHHHcCCeEE
Q 011501 80 GSPVDQTIKTLSVYMEKG-DCIIDGG-NEWYENTERRQKAVAELGLLYL 126 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g-~iiId~s-t~~~~~~~~~~~~l~~~g~~~i 126 (484)
..+.+.+...+. .| .++++.- +....+++++.+..++.|+.+.
T Consensus 76 ~~H~~~~~~al~----aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~ 120 (362)
T 3fhl_A 76 NTHYEYAGMALE----AGKNVVVEKPFTSTTKQGEELIALAKKKGLMLS 120 (362)
T ss_dssp GGHHHHHHHHHH----TTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHH----CCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 877665544433 34 4566532 4556788888888888887654
No 225
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.13 E-value=1.6e-05 Score=77.74 Aligned_cols=97 Identities=13% Similarity=0.107 Sum_probs=65.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC--cEEEEeCChhHHHH----HHHHhhhc-CCCCeeecCCHhHHHhhcCCCcEEEEe
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDE----TVERAKQE-GNLPLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~----~~~~~~~~-~~~~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
|||+|||+|.||.++|..|+.+|+ +|.+||+++++++. +....... ...++..+++ .+.++. +|+||++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~---aDiVVia 76 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG---SEIIVVT 76 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT---CSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC---CCEEEEC
Confidence 589999999999999999999998 89999999988652 22211100 0112444556 555555 9999999
Q ss_pred cCCCc---------------hHHHHHHHHhhhcCCCCEEEecCC
Q 011501 77 VKAGS---------------PVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 77 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st 105 (484)
.+.+. .++++.+.+..+ .++.+++..||
T Consensus 77 ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvsN 119 (294)
T 1oju_A 77 AGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVTN 119 (294)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECSS
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeCC
Confidence 85542 122333455555 57788888885
No 226
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=98.11 E-value=9e-06 Score=84.92 Aligned_cols=91 Identities=10% Similarity=0.058 Sum_probs=72.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|+|||+|.||..+|+.+...|.+|+++|+++.+.+.+...+ +. ..++++++.. +|+|+.+++....+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~G-------a~-~~~l~e~l~~---aDvVi~atgt~~~i 343 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEG-------FD-VVTVEEAIGD---ADIVVTATGNKDII 343 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CE-ECCHHHHGGG---CSEEEECSSSSCSB
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-------CE-EecHHHHHhC---CCEEEECCCCHHHH
Confidence 5899999999999999999999999999999998876655443 33 3467787766 99999999876433
Q ss_pred HHHHHHHhhhcCCCCEEEecCCCCh
Q 011501 84 DQTIKTLSVYMEKGDCIIDGGNEWY 108 (484)
Q Consensus 84 ~~vl~~l~~~l~~g~iiId~st~~~ 108 (484)
. .+.+..+++|.+|++.+....
T Consensus 344 ~---~~~l~~mk~ggilvnvG~~~~ 365 (494)
T 3ce6_A 344 M---LEHIKAMKDHAILGNIGHFDN 365 (494)
T ss_dssp C---HHHHHHSCTTCEEEECSSSGG
T ss_pred H---HHHHHhcCCCcEEEEeCCCCC
Confidence 2 245566889999999998653
No 227
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=98.11 E-value=5e-06 Score=84.16 Aligned_cols=114 Identities=13% Similarity=0.216 Sum_probs=79.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhC--CCcEE-EEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCC
Q 011501 4 TRIGLAGLAVMGQNLALNIAEK--GFPIS-VYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAG 80 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~--G~~V~-v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 80 (484)
.||||||+| +|...+..+.+. ++++. ++|+++++.+++.++. ++..++|.+++.+. .|++++++|+.
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~------gv~~~~~~~~l~~~---~D~v~i~~p~~ 77 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAF------GIPLYTSPEQITGM---PDIACIVVRST 77 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHT------TCCEESSGGGCCSC---CSEEEECCC--
T ss_pred CEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHh------CCCEECCHHHHhcC---CCEEEEECCCc
Confidence 589999999 899888888765 56654 7899999998887754 36778999999876 99999999987
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
.+...-.+-....+..|.-|+.-=...+.+..++.+..+++|+.|.-
T Consensus 78 ~h~~~~~~~a~~al~aGkhVl~EKPl~~~ea~~l~~~A~~~g~~~~v 124 (372)
T 4gmf_A 78 VAGGAGTQLARHFLARGVHVIQEHPLHPDDISSLQTLAQEQGCCYWI 124 (372)
T ss_dssp CTTSHHHHHHHHHHHTTCEEEEESCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred ccchhHHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHcCCEEEE
Confidence 55211111112223455544443345667888888888888887654
No 228
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=98.11 E-value=1.2e-05 Score=80.65 Aligned_cols=115 Identities=11% Similarity=0.176 Sum_probs=78.6
Q ss_pred CCeEEEEcccHHHH-HHHHHHHhC-CCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 3 QTRIGLAGLAVMGQ-NLALNIAEK-GFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 3 ~~~IgiIGlG~mG~-~lA~~L~~~-G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
++||||||+|.||. ..+..+.+. +++| .++|++ +.+++.+..... ++..+++++++++. .+.|+|++|+|+
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~a~~~~~~---~~~~~~~~~~ll~~-~~~D~V~i~tp~ 75 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH--VNEKAAAPFKEK---GVNFTADLNELLTD-PEIELITICTPA 75 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT--CCHHHHHHHHTT---TCEEESCTHHHHSC-TTCCEEEECSCG
T ss_pred eeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC--HHHHHHHhhCCC---CCeEECCHHHHhcC-CCCCEEEEeCCc
Confidence 46999999999998 466666654 5666 488988 444554432111 36778999999874 348999999999
Q ss_pred CchHHHHHHHHhhhcCCCC-EEEecC-CCChHHHHHHHHHHHHcCCeEEe
Q 011501 80 GSPVDQTIKTLSVYMEKGD-CIIDGG-NEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
..+.+.+...+ ..|+ ++++.- +..+.+.+++.+..+++|+.+.-
T Consensus 76 ~~h~~~~~~al----~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v 121 (349)
T 3i23_A 76 HTHYDLAKQAI----LAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVMP 121 (349)
T ss_dssp GGHHHHHHHHH----HTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHH----HcCCEEEEECCCcCCHHHHHHHHHHHHHcCCeEEE
Confidence 87766554433 3444 555532 44567788888888888876543
No 229
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.09 E-value=3.9e-05 Score=75.78 Aligned_cols=99 Identities=10% Similarity=0.158 Sum_probs=64.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCC--hhHHHHHHHHhhh----c-CCCCeeecCCHhHHHhhcCCCcEEE
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRT--TSKVDETVERAKQ----E-GNLPLYGFHDPESFVHSIQKPRVII 74 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~--~~~~~~~~~~~~~----~-~~~~~~~~~s~~e~~~~l~~advIi 74 (484)
.+||+|||+|.||.++|..|+.+|+ +|.++|++ +++.+........ . ...++..+++.++ ++. +|+||
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a-~~~---aDvVI 83 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYAD-TAD---SDVVV 83 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGG-GTT---CSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHH-hCC---CCEEE
Confidence 3589999999999999999999999 99999999 4444332211100 0 0113444555543 343 99999
Q ss_pred EecCCCc---------------hHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 75 MLVKAGS---------------PVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 75 ~~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
++...+. .++++.+.+..+ .++.+++..||-
T Consensus 84 iaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vlvvsNP 129 (315)
T 3tl2_A 84 ITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH-SPNAIIVVLTNP 129 (315)
T ss_dssp ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSS
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEECCCh
Confidence 9985432 123333455555 367788888864
No 230
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.09 E-value=2.1e-05 Score=77.90 Aligned_cols=99 Identities=13% Similarity=0.158 Sum_probs=61.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCC--cEEEEeCChhHHHHHHHHhhhcCCC--CeeecCCHhHHHhhcCCCcEEEEecC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKQEGNL--PLYGFHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~~~~~~~~~~~~--~~~~~~s~~e~~~~l~~advIi~~vp 78 (484)
++||+|||+|.+|.+++..|+..|+ +|.++|+++++++...........+ +++...+..+.++ .+|+||++++
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~---~aDvVii~~g 83 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVK---DCDVIVVTAG 83 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGT---TCSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhC---CCCEEEEcCC
Confidence 3689999999999999999999988 8999999987755432222110000 1222222233344 4999999998
Q ss_pred CCch---------------HHHHHHHHhhhcCCCCEEEecCC
Q 011501 79 AGSP---------------VDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 79 ~~~~---------------v~~vl~~l~~~l~~g~iiId~st 105 (484)
.+.. +.++.+.+.++ .++.+|+..||
T Consensus 84 ~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tN 124 (318)
T 1y6j_A 84 ANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVSN 124 (318)
T ss_dssp C------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECSS
T ss_pred CCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEecC
Confidence 7531 34555666666 46777777644
No 231
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.08 E-value=1.7e-05 Score=81.89 Aligned_cols=75 Identities=12% Similarity=0.233 Sum_probs=56.9
Q ss_pred CCCeEEEEcccHH--HHHHHHHHHh----CCCcEEEEeCChhHHHHHHHHhhhc--CCCCeeecCCHhHHHhhcCCCcEE
Q 011501 2 VQTRIGLAGLAVM--GQNLALNIAE----KGFPISVYNRTTSKVDETVERAKQE--GNLPLYGFHDPESFVHSIQKPRVI 73 (484)
Q Consensus 2 ~~~~IgiIGlG~m--G~~lA~~L~~----~G~~V~v~dr~~~~~~~~~~~~~~~--~~~~~~~~~s~~e~~~~l~~advI 73 (484)
+.+||+|||.|.| |.+++..|+. .| +|.+||+++++++........- ...+++.+++.+++++. +|+|
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~d---ADfV 79 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSA---ADIV 79 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTT---CSEE
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcC---CCEE
Confidence 3469999999997 6899988886 57 9999999998876654322100 01146778899988887 9999
Q ss_pred EEecCCC
Q 011501 74 IMLVKAG 80 (484)
Q Consensus 74 i~~vp~~ 80 (484)
|++++.+
T Consensus 80 I~airvG 86 (450)
T 3fef_A 80 IISILPG 86 (450)
T ss_dssp EECCCSS
T ss_pred EeccccC
Confidence 9999765
No 232
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=98.06 E-value=2.8e-05 Score=80.73 Aligned_cols=118 Identities=12% Similarity=0.142 Sum_probs=79.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeee----cCCHhHHHhhcCCCcEEEEe
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYG----FHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~----~~s~~e~~~~l~~advIi~~ 76 (484)
|.+++|.|+|+|.+|..++..|++.|++|.++||++++.+++.+... ++.. ..+.+++.+.++++|+||.+
T Consensus 1 M~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~-----~~~~~~~Dv~d~~~l~~~l~~~DvVIn~ 75 (450)
T 1ff9_A 1 MATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ-----HSTPISLDVNDDAALDAEVAKHDLVISL 75 (450)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCT-----TEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcC-----CceEEEeecCCHHHHHHHHcCCcEEEEC
Confidence 77779999999999999999999999999999999988776654221 1111 22334333333459999999
Q ss_pred cCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEec
Q 011501 77 VKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 77 vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
+|...+. .+... .+.+|..++|.+...+ .+..+.+.+++.|+.++..
T Consensus 76 a~~~~~~-~i~~a---~l~~g~~vvd~~~~~~-~~~~l~~aA~~aGv~~i~g 122 (450)
T 1ff9_A 76 IPYTFHA-TVIKS---AIRQKKHVVTTSYVSP-AMMELDQAAKDAGITVMNE 122 (450)
T ss_dssp CC--CHH-HHHHH---HHHHTCEEEESSCCCH-HHHHTHHHHHHTTCEEECS
T ss_pred Cccccch-HHHHH---HHhCCCeEEEeecccH-HHHHHHHHHHHCCCeEEeC
Confidence 9876432 23222 2445778888876554 4556777778888876653
No 233
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.06 E-value=2.6e-05 Score=77.18 Aligned_cols=99 Identities=11% Similarity=0.151 Sum_probs=63.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCC--cEEEEeCChhHHHHHHHHhhhcC-CC--CeeecCCHhHHHhhcCCCcEEEEec
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKQEG-NL--PLYGFHDPESFVHSIQKPRVIIMLV 77 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~~~~~~~~~~-~~--~~~~~~s~~e~~~~l~~advIi~~v 77 (484)
++||+|||+|.||.++|..|+..|. +|.++|+++++.+.......... .. ..+...+..+.++. +|+||++.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~---aDvViia~ 82 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRD---ADLVVICA 82 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTT---CSEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCC---CCEEEEcC
Confidence 4699999999999999999998775 89999999876554322211100 00 12222333344444 99999998
Q ss_pred CCCc---------------hHHHHHHHHhhhcCCCCEEEecCC
Q 011501 78 KAGS---------------PVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 78 p~~~---------------~v~~vl~~l~~~l~~g~iiId~st 105 (484)
+.+. .+.++++.+..+. ++.+++..||
T Consensus 83 ~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~~iv~tN 124 (316)
T 1ldn_A 83 GANQKPGETRLDLVDKNIAIFRSIVESVMASG-FQGLFLVATN 124 (316)
T ss_dssp SCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT-CCSEEEECSS
T ss_pred CCCCCCCCCHHHHHHcChHHHHHHHHHHHHHC-CCCEEEEeCC
Confidence 7653 1234445555554 5666777766
No 234
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.05 E-value=1.7e-05 Score=80.35 Aligned_cols=90 Identities=18% Similarity=0.259 Sum_probs=70.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChh------HHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEec
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTS------KVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLV 77 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~------~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~v 77 (484)
++|+|||.|..|.+-|+||.+.|.+|.+--|... ..+.+.+. ++.+ .+++|+++. +|+|++.+
T Consensus 38 K~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~-------Gf~v-~~~~eA~~~---ADvV~~L~ 106 (491)
T 3ulk_A 38 KKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATEN-------GFKV-GTYEELIPQ---ADLVINLT 106 (491)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHT-------TCEE-EEHHHHGGG---CSEEEECS
T ss_pred CEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHC-------CCEe-cCHHHHHHh---CCEEEEeC
Confidence 5899999999999999999999999999887432 22233322 2443 478899888 99999999
Q ss_pred CCCchHHHHHHHHhhhcCCCCEEEecCC
Q 011501 78 KAGSPVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 78 p~~~~v~~vl~~l~~~l~~g~iiId~st 105 (484)
|+. .-..+.+.+.|.|++|+++.-...
T Consensus 107 PD~-~q~~vy~~I~p~lk~G~~L~faHG 133 (491)
T 3ulk_A 107 PDK-QHSDVVRTVQPLMKDGAALGYSHG 133 (491)
T ss_dssp CGG-GHHHHHHHHGGGSCTTCEEEESSC
T ss_pred Chh-hHHHHHHHHHhhCCCCCEEEecCc
Confidence 997 445667889999999999875443
No 235
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=98.05 E-value=3e-05 Score=74.91 Aligned_cols=113 Identities=16% Similarity=0.142 Sum_probs=77.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
.+++.|+|+|.||.+++..|++.|.+|+++||++++.+++.+.....+ .+.. .+.+++.+ ..+|+||.++|.+..
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~--~~~~-~~~~~~~~--~~~DivVn~t~~~~~ 193 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG--SIQA-LSMDELEG--HEFDLIINATSSGIS 193 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS--SEEE-CCSGGGTT--CCCSEEEECCSCGGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC--CeeE-ecHHHhcc--CCCCEEEECCCCCCC
Confidence 357999999999999999999999999999999999888776532110 1222 23334331 349999999987643
Q ss_pred HHHHHHHHh-hhcCCCCEEEecCCCChHHHHHHHHHHHHcCCe
Q 011501 83 VDQTIKTLS-VYMEKGDCIIDGGNEWYENTERRQKAVAELGLL 124 (484)
Q Consensus 83 v~~vl~~l~-~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 124 (484)
..+ ..+. ..+.++.+++|.+... ..+. +.+..+++|..
T Consensus 194 -~~~-~~i~~~~l~~~~~v~D~~y~p-~~t~-~~~~a~~~G~~ 232 (271)
T 1nyt_A 194 -GDI-PAIPSSLIHPGIYCYDMFYQK-GKTP-FLAWCEQRGSK 232 (271)
T ss_dssp -TCC-CCCCGGGCCTTCEEEESCCCS-SCCH-HHHHHHHTTCC
T ss_pred -CCC-CCCCHHHcCCCCEEEEeccCC-cCCH-HHHHHHHcCCC
Confidence 111 0111 2356889999998864 4443 44556777765
No 236
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=98.04 E-value=3.9e-06 Score=81.22 Aligned_cols=112 Identities=11% Similarity=0.140 Sum_probs=78.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++.|||+|.||.+++..|++.|. +|+++||++++.+++.+... .....++. . ..+|+||.++|.+..
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~------~~~~~~~~--~---~~~DivInaTp~gm~ 188 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG------YAYINSLE--N---QQADILVNVTSIGMK 188 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT------CEEESCCT--T---CCCSEEEECSSTTCT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC------Cccchhhh--c---ccCCEEEECCCCCcc
Confidence 479999999999999999999997 89999999999888876532 11222222 2 349999999998742
Q ss_pred HH---HHHHHH-hhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 83 VD---QTIKTL-SVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 83 v~---~vl~~l-~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
.. +.. .+ ...+.++.+++|.... |..| .+.+..+++|..+++..
T Consensus 189 ~~~~~~~~-~~~~~~l~~~~~v~DlvY~-P~~T-~ll~~A~~~G~~~i~Gl 236 (271)
T 1npy_A 189 GGKEEMDL-AFPKAFIDNASVAFDVVAM-PVET-PFIRYAQARGKQTISGA 236 (271)
T ss_dssp TSTTTTSC-SSCHHHHHHCSEEEECCCS-SSSC-HHHHHHHHTTCEEECHH
T ss_pred CccccCCC-CCCHHHcCCCCEEEEeecC-CCCC-HHHHHHHHCCCEEECCH
Confidence 11 000 01 1224468899999874 4455 66677788898877654
No 237
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.04 E-value=1.2e-05 Score=79.62 Aligned_cols=89 Identities=15% Similarity=0.387 Sum_probs=65.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC-CCc-EEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecC
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEK-GFP-ISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~-G~~-V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp 78 (484)
|+++||+|||+|.||..++..+.+. +.+ |.++|+++++ .+. . ++..++++++++. .+|+|++|+|
T Consensus 1 M~~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~--~~~-----~---gv~~~~d~~~ll~---~~DvViiatp 67 (320)
T 1f06_A 1 MTNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL--DTK-----T---PVFDVADVDKHAD---DVDVLFLCMG 67 (320)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC--SSS-----S---CEEEGGGGGGTTT---TCSEEEECSC
T ss_pred CCCCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH--hhc-----C---CCceeCCHHHHhc---CCCEEEEcCC
Confidence 7778999999999999999999887 455 4688998655 221 1 3556677777764 3999999999
Q ss_pred CCchHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 79 AGSPVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 79 ~~~~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
+..+.+.+. ..++.|..+++....
T Consensus 68 ~~~h~~~~~----~al~aG~~Vv~ekp~ 91 (320)
T 1f06_A 68 SATDIPEQA----PKFAQFACTVDTYDN 91 (320)
T ss_dssp TTTHHHHHH----HHHTTTSEEECCCCC
T ss_pred cHHHHHHHH----HHHHCCCEEEECCCC
Confidence 876544443 445567777776654
No 238
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.03 E-value=2.3e-05 Score=81.63 Aligned_cols=74 Identities=14% Similarity=0.267 Sum_probs=54.4
Q ss_pred CeEEEEcccHH-HHHHHHHHHhC-----CCcEEEEeCChhHHHHHHHHhh----hcC-CCCeeecCCHhHHHhhcCCCcE
Q 011501 4 TRIGLAGLAVM-GQNLALNIAEK-----GFPISVYNRTTSKVDETVERAK----QEG-NLPLYGFHDPESFVHSIQKPRV 72 (484)
Q Consensus 4 ~~IgiIGlG~m-G~~lA~~L~~~-----G~~V~v~dr~~~~~~~~~~~~~----~~~-~~~~~~~~s~~e~~~~l~~adv 72 (484)
+||+|||.|.+ |.++|..|+.. +.+|.+||+++++++....... ..+ ..++..++++++.++. +|+
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~---AD~ 105 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTD---VDF 105 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSS---CSE
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcC---CCE
Confidence 48999999998 66688788887 6789999999988665432111 000 1146666788777776 999
Q ss_pred EEEecCCC
Q 011501 73 IIMLVKAG 80 (484)
Q Consensus 73 Ii~~vp~~ 80 (484)
||+++|.+
T Consensus 106 VViaag~~ 113 (472)
T 1u8x_X 106 VMAHIRVG 113 (472)
T ss_dssp EEECCCTT
T ss_pred EEEcCCCc
Confidence 99999885
No 239
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=98.00 E-value=7.1e-06 Score=83.29 Aligned_cols=95 Identities=16% Similarity=0.141 Sum_probs=68.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCe-e---ecCCHhHHHhhcCCCcEEEEecCC
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPL-Y---GFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~-~---~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
.+|+|||+|.+|..+++.+...|.+|+++|+++++.+.+.+.... .+ . ...++++++.. +|+||.+++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~----~~~~~~~~~~~l~~~l~~---aDvVi~~~~~ 241 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCG----RIHTRYSSAYELEGAVKR---ADLVIGAVLV 241 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT----SSEEEECCHHHHHHHHHH---CSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCC----eeEeccCCHHHHHHHHcC---CCEEEECCCc
Confidence 589999999999999999999999999999999988776653321 11 1 12234555555 9999998864
Q ss_pred Cch-HHHH-HHHHhhhcCCCCEEEecCC
Q 011501 80 GSP-VDQT-IKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 80 ~~~-v~~v-l~~l~~~l~~g~iiId~st 105 (484)
+.. ...+ .++..+.+++|.+|||.+.
T Consensus 242 p~~~t~~li~~~~l~~mk~g~~iV~va~ 269 (377)
T 2vhw_A 242 PGAKAPKLVSNSLVAHMKPGAVLVDIAI 269 (377)
T ss_dssp TTSCCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred CCCCCcceecHHHHhcCCCCcEEEEEec
Confidence 421 1111 2445567888999999883
No 240
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.99 E-value=8.1e-06 Score=83.21 Aligned_cols=90 Identities=8% Similarity=0.085 Sum_probs=69.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|+|+|+|.+|..+|+.|...|.+|+++|+++.+.......+ +. ..++++++.. +|+|++|..+.
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G-------~~-v~~Leeal~~---ADIVi~atgt~--- 286 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDG-------FR-LVKLNEVIRQ---VDIVITCTGNK--- 286 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CE-ECCHHHHTTT---CSEEEECSSCS---
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcC-------CE-eccHHHHHhc---CCEEEECCCCc---
Confidence 5899999999999999999999999999999987654433322 22 3578888877 99999973322
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCCh
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWY 108 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~ 108 (484)
.++ .+....+++|.+||+++...+
T Consensus 287 -~lI~~e~l~~MK~gailINvgrg~~ 311 (435)
T 3gvp_A 287 -NVVTREHLDRMKNSCIVCNMGHSNT 311 (435)
T ss_dssp -CSBCHHHHHHSCTTEEEEECSSTTT
T ss_pred -ccCCHHHHHhcCCCcEEEEecCCCc
Confidence 233 255667889999999998764
No 241
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.98 E-value=2.2e-05 Score=80.20 Aligned_cols=90 Identities=10% Similarity=0.012 Sum_probs=70.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++++|||+|.+|..+|+.+...|.+|+++|+++.+.......+ +. ..+++++++. +|+|++++++..
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G-------~~-vv~LeElL~~---ADIVv~atgt~~-- 314 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDG-------FE-VVTLDDAAST---ADIVVTTTGNKD-- 314 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT-------CE-ECCHHHHGGG---CSEEEECCSSSS--
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcC-------ce-eccHHHHHhh---CCEEEECCCCcc--
Confidence 5899999999999999999999999999999987654433222 33 3478888887 999999875432
Q ss_pred HHHH-HHHhhhcCCCCEEEecCCCCh
Q 011501 84 DQTI-KTLSVYMEKGDCIIDGGNEWY 108 (484)
Q Consensus 84 ~~vl-~~l~~~l~~g~iiId~st~~~ 108 (484)
++ .+.+..+++|.+||+++....
T Consensus 315 --lI~~e~l~~MK~GAILINvGRgdv 338 (464)
T 3n58_A 315 --VITIDHMRKMKDMCIVGNIGHFDN 338 (464)
T ss_dssp --SBCHHHHHHSCTTEEEEECSSSTT
T ss_pred --ccCHHHHhcCCCCeEEEEcCCCCc
Confidence 23 345567889999999988753
No 242
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=97.98 E-value=2e-05 Score=77.46 Aligned_cols=95 Identities=14% Similarity=0.157 Sum_probs=64.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCC--cEEEEeCChhH---HHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEec
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSK---VDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLV 77 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~---~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~v 77 (484)
++||+|||+|.||..+|..|+.+|+ +|.++|++++. ..++..... .+++.+.++++ ++. +|+||+++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~----~~i~~t~d~~~-l~~---aD~Vi~aa 85 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNL----PNVEISKDLSA-SAH---SKVVIFTV 85 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTC----TTEEEESCGGG-GTT---CSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcC----CCeEEeCCHHH-HCC---CCEEEEcC
Confidence 4689999999999999999999998 99999999852 222222111 14666667633 444 99999997
Q ss_pred CCCc--------------hHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 78 KAGS--------------PVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 78 p~~~--------------~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
..+. .+.++++.+..+. ++.++|..||.
T Consensus 86 g~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP 127 (303)
T 2i6t_A 86 NSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQP 127 (303)
T ss_dssp CC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCCh
Confidence 3321 1345556666665 77788888884
No 243
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.97 E-value=3.9e-05 Score=77.76 Aligned_cols=115 Identities=13% Similarity=0.166 Sum_probs=81.5
Q ss_pred CCeEEEEc-ccHHHHH-HH----HHHHhCC-CcE----------EEEeCChhHHHHHHHHhhhcCCCCe-eecCCHhHHH
Q 011501 3 QTRIGLAG-LAVMGQN-LA----LNIAEKG-FPI----------SVYNRTTSKVDETVERAKQEGNLPL-YGFHDPESFV 64 (484)
Q Consensus 3 ~~~IgiIG-lG~mG~~-lA----~~L~~~G-~~V----------~v~dr~~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~ 64 (484)
++|||||| +|.||.. .+ ..+.+.+ ..+ .++|+++++.+.+.+... + ..++++++++
T Consensus 6 ~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~------~~~~~~~~~~ll 79 (383)
T 3oqb_A 6 RLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFN------IARWTTDLDAAL 79 (383)
T ss_dssp EEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTT------CCCEESCHHHHH
T ss_pred eeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhC------CCcccCCHHHHh
Confidence 35899999 9999998 66 6666554 222 499999999988876542 3 4678999998
Q ss_pred hhcCCCcEEEEecCCCchHHHHHHHHhhhcCCCCEEE-ec-CCCChHHHHHHHHHHHHcCCeEEec
Q 011501 65 HSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCII-DG-GNEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 65 ~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiI-d~-st~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
+. ...|+|++|+|+..+.+.+... +..|+-|+ +. -.....+..++.+..++.|+.+.-+
T Consensus 80 ~~-~~iD~V~i~tp~~~h~~~~~~a----l~~Gk~V~~EKP~a~~~~~~~~l~~~a~~~~~~~~v~ 140 (383)
T 3oqb_A 80 AD-KNDTMFFDAATTQARPGLLTQA----INAGKHVYCEKPIATNFEEALEVVKLANSKGVKHGTV 140 (383)
T ss_dssp HC-SSCCEEEECSCSSSSHHHHHHH----HTTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred cC-CCCCEEEECCCchHHHHHHHHH----HHCCCeEEEcCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 75 3489999999998776655433 34455444 32 1345577888888888888755433
No 244
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=97.94 E-value=7.1e-05 Score=74.69 Aligned_cols=76 Identities=16% Similarity=0.231 Sum_probs=54.8
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCC--cEEEEeCChhHHHHHHHHhhhc-C-CCCeeecCCHhHHHhhcCCCcEEEE
Q 011501 1 MVQTRIGLAGL-AVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKQE-G-NLPLYGFHDPESFVHSIQKPRVIIM 75 (484)
Q Consensus 1 M~~~~IgiIGl-G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~~~~~~~~~-~-~~~~~~~~s~~e~~~~l~~advIi~ 75 (484)
|.++||+|||+ |.+|.++|..++..|. +|.++|+++++++......... . ..++...++..+.++. +|+||+
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~d---ADvVvi 82 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTD---AKYIVS 82 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTT---EEEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCC---CCEEEE
Confidence 45679999998 9999999999999884 8999999988765422211110 0 1135556777776666 999999
Q ss_pred ecCC
Q 011501 76 LVKA 79 (484)
Q Consensus 76 ~vp~ 79 (484)
+...
T Consensus 83 taG~ 86 (343)
T 3fi9_A 83 SGGA 86 (343)
T ss_dssp CCC-
T ss_pred ccCC
Confidence 8743
No 245
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.93 E-value=5e-05 Score=79.09 Aligned_cols=117 Identities=11% Similarity=0.132 Sum_probs=79.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC-CCcEEEEeCChhHHHHHHHHhhhcCCCCeee--cCCHhHHHhhcCCCcEEEEecCC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEK-GFPISVYNRTTSKVDETVERAKQEGNLPLYG--FHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~--~~s~~e~~~~l~~advIi~~vp~ 79 (484)
+++|.|+|+|.+|..++..|++. |++|+++||++++.+++.+... ..... ..+.+++.+.++.+|+||.|+|.
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~----~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~ 98 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSG----SKAISLDVTDDSALDKVLADNDVVISLIPY 98 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGT----CEEEECCTTCHHHHHHHHHTSSEEEECSCG
T ss_pred CCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcC----CcEEEEecCCHHHHHHHHcCCCEEEECCch
Confidence 45799999999999999999998 7899999999999888765411 01111 12333333323349999999987
Q ss_pred CchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEec
Q 011501 80 GSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
... ..+... .+..|..++|.+...| .+..+.+.+++.|+.+++.
T Consensus 99 ~~~-~~v~~a---~l~~g~~vvd~~~~~p-~~~~Ll~~Ak~aGv~~i~g 142 (467)
T 2axq_A 99 TFH-PNVVKS---AIRTKTDVVTSSYISP-ALRELEPEIVKAGITVMNE 142 (467)
T ss_dssp GGH-HHHHHH---HHHHTCEEEECSCCCH-HHHHHHHHHHHHTCEEECS
T ss_pred hhh-HHHHHH---HHhcCCEEEEeecCCH-HHHHHHHHHHHcCCEEEec
Confidence 632 233322 3446788899876554 4456667777788876654
No 246
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=97.92 E-value=1.1e-05 Score=81.36 Aligned_cols=86 Identities=27% Similarity=0.470 Sum_probs=63.3
Q ss_pred CCCCHHHHHHHHHhhccCc-chhhhhhhhccccccccCCCCchhHHHhhhhcCCCCchHHHHHHHHHcCCCcchHHHHHH
Q 011501 211 GKLSNEELQQVFSEWNKGE-LLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLD 289 (484)
Q Consensus 211 g~~~~~~i~~~~~~~~~g~-~~s~l~~~~~~~l~~~~~~~~~~~l~~i~~~~~~k~tg~~~~~~A~~~gvp~p~~~~av~ 289 (484)
| ++.+++.++ |+.|. +.||+++++.+++..+. . ++.+.+.+.++++|+|+++.|.+.|+|+|++++|++
T Consensus 259 ~-~d~~~i~~~---~~~g~~~~s~~l~~~~~~~~~~p----~--~~~~~~~~~d~g~~r~~~~~A~~~gvp~p~~~~al~ 328 (358)
T 4e21_A 259 D-LDLADITEV---WRRGSVISSWLLDLSATALLDSP----D--LQEFQGRVSDSGEGRWTVAAAIDEGVPAHVLSSALY 328 (358)
T ss_dssp C-CCHHHHHHH---HTTTSTTCBHHHHHHHHHHHHCT----T--CTTC--CCCCCSHHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred C-CCHHHHHHH---HhCccHHHHHHHHHHHHHHhhCC----C--hHHHHHHHHhcCcHHHHHHHHHHcCCChHHHHHHHH
Confidence 5 788777555 78876 79999999988887532 1 122344555678999999999999999999999999
Q ss_pred HHHHhcCchHHHHHHHhcc
Q 011501 290 ARFLSGLKEERVEAAKVFR 308 (484)
Q Consensus 290 ~r~~s~~~~~r~~~~~~~~ 308 (484)
.|+.|. .+|..+.++++
T Consensus 329 ~~~~s~--~~~~~~~~l~~ 345 (358)
T 4e21_A 329 ERFSSR--GEDDFANRLLS 345 (358)
T ss_dssp HHHHHT--TTTHHHHHHHH
T ss_pred HHHHHC--CCcccHHHHHH
Confidence 999994 44554444443
No 247
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.91 E-value=2.6e-05 Score=79.85 Aligned_cols=95 Identities=21% Similarity=0.263 Sum_probs=65.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
++|+|||+|.||..+++.|...|. +|+++||++++.+++.+.... ......++.+.+.. +|+||.++|.+..
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~----~~~~~~~l~~~l~~---aDvVi~at~~~~~ 240 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG----EAVRFDELVDHLAR---SDVVVSATAAPHP 240 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC----EECCGGGHHHHHHT---CSEEEECCSSSSC
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC----ceecHHhHHHHhcC---CCEEEEccCCCCc
Confidence 589999999999999999999998 899999999987666554321 11112455666655 9999999987754
Q ss_pred HH--HHHHH-Hhh-hcCCCCEEEecCC
Q 011501 83 VD--QTIKT-LSV-YMEKGDCIIDGGN 105 (484)
Q Consensus 83 v~--~vl~~-l~~-~l~~g~iiId~st 105 (484)
+. ..+.. ++. .-.++.+++|.+.
T Consensus 241 ~~~~~~l~~~~lk~r~~~~~v~vdia~ 267 (404)
T 1gpj_A 241 VIHVDDVREALRKRDRRSPILIIDIAN 267 (404)
T ss_dssp CBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred eecHHHHHHHHHhccCCCCEEEEEccC
Confidence 32 33333 211 1124456777763
No 248
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.91 E-value=4.7e-05 Score=78.11 Aligned_cols=115 Identities=13% Similarity=0.123 Sum_probs=75.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHh--hcCCCcEEEEecCCCc
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVH--SIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~--~l~~advIi~~vp~~~ 81 (484)
++|.|+|+|.+|..+++.|.+.|++|++.|+++++++.+.+.+.. -+.+..+-.+++. .++++|+||++++++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~----vi~GDat~~~~L~~agi~~A~~viv~~~~~~ 80 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMK----VFYGDATRMDLLESAGAAKAEVLINAIDDPQ 80 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCC----CEESCTTCHHHHHHTTTTTCSEEEECCSSHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCe----EEEcCCCCHHHHHhcCCCccCEEEECCCChH
Confidence 579999999999999999999999999999999999888765421 1222223334433 2567999999998864
Q ss_pred hHHHHHHHHhhhcCCC-CEEEecCCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 82 PVDQTIKTLSVYMEKG-DCIIDGGNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g-~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
....++ ..+..+.+. .+|+-..+ + .....+...|+..+-.|
T Consensus 81 ~n~~i~-~~ar~~~p~~~Iiara~~--~----~~~~~L~~~Gad~Vi~~ 122 (413)
T 3l9w_A 81 TNLQLT-EMVKEHFPHLQIIARARD--V----DHYIRLRQAGVEKPERE 122 (413)
T ss_dssp HHHHHH-HHHHHHCTTCEEEEEESS--H----HHHHHHHHTTCSSCEET
T ss_pred HHHHHH-HHHHHhCCCCeEEEEECC--H----HHHHHHHHCCCCEEECc
Confidence 333333 333444455 44443332 1 22344556676654444
No 249
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=97.90 E-value=7.5e-05 Score=74.06 Aligned_cols=99 Identities=10% Similarity=0.128 Sum_probs=64.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCC--cEEEEeCChhHHHH----HHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEe
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDE----TVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~----~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
.+||+|||+|.||.++|..|+..|+ +|.++|+++++++. +....... +.+++...+..+.++. +|+||++
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~-~~~v~i~~~~~~a~~~---aDvVvi~ 80 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFA-PQPVKTSYGTYEDCKD---ADIVCIC 80 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGS-SSCCEEEEECGGGGTT---CSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccc-cCCeEEEeCcHHHhCC---CCEEEEe
Confidence 4699999999999999999999987 89999999988765 33211100 0022333333344444 9999999
Q ss_pred cCCCc----h-----------HHHHHHHHhhhcCCCCEEEecCCC
Q 011501 77 VKAGS----P-----------VDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 77 vp~~~----~-----------v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
...+. . ++++.+.+..+ .++.+++..||-
T Consensus 81 ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlvvtNP 124 (326)
T 3pqe_A 81 AGANQKPGETRLELVEKNLKIFKGIVSEVMAS-GFDGIFLVATNP 124 (326)
T ss_dssp CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSS
T ss_pred cccCCCCCccHHHHHHHHHHHHHHHHHHHHHh-cCCeEEEEcCCh
Confidence 85432 1 22333445554 467788888863
No 250
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.88 E-value=1.9e-05 Score=80.71 Aligned_cols=91 Identities=11% Similarity=0.131 Sum_probs=65.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecC-------------------------
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFH------------------------- 58 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~------------------------- 58 (484)
.+|+|||+|.+|...++.+...|.+|+++|+++++.+.+.+.+. ..+.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 245 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGA-------EFLELDFKEEAGSGDGYAKVMSDAFIKAE 245 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTC-------EECCC--------CCHHHHHHSHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCC-------EEEEecccccccccccchhhccHHHHHHH
Confidence 58999999999999999999999999999999998777654332 1111
Q ss_pred --CHhHHHhhcCCCcEEEEe--cCCCchHHHHH-HHHhhhcCCCCEEEecCC
Q 011501 59 --DPESFVHSIQKPRVIIML--VKAGSPVDQTI-KTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 59 --s~~e~~~~l~~advIi~~--vp~~~~v~~vl-~~l~~~l~~g~iiId~st 105 (484)
++++++.. +|+||.+ +|... ...++ ++.+..+++|.+|||++.
T Consensus 246 ~~~l~e~~~~---aDvVI~~~~~pg~~-ap~li~~~~l~~mk~g~vIVdva~ 293 (401)
T 1x13_A 246 MELFAAQAKE---VDIIVTTALIPGKP-APKLITREMVDSMKAGSVIVDLAA 293 (401)
T ss_dssp HHHHHHHHHH---CSEEEECCCCTTSC-CCCCBCHHHHHTSCTTCEEEETTG
T ss_pred HHHHHHHhCC---CCEEEECCccCCCC-CCeeeCHHHHhcCCCCcEEEEEcC
Confidence 24455555 9999999 44211 11111 344556788999999884
No 251
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=97.88 E-value=5.1e-05 Score=75.19 Aligned_cols=99 Identities=9% Similarity=0.060 Sum_probs=68.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCC--cEEEEeCChhHHHHHHHHhhh----cCCCCeeecCCHhHHHhhcCCCcEEEEe
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKQ----EGNLPLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~~~~~~~~----~~~~~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
.+||+|||+|.||.++|..|+..|+ +|.++|+++++++........ ....++....++++ ++. +|+||++
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~d---aDiVIit 96 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAG---SKLVVIT 96 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSS---CSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCC---CCEEEEe
Confidence 3689999999999999999999997 899999999876553321111 00002445566665 444 9999998
Q ss_pred cCCCc---------------hHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 77 VKAGS---------------PVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 77 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
...+. .++++.+.+..+ .++.+++..||-
T Consensus 97 aG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvtNP 140 (330)
T 3ldh_A 97 AGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHPEL 140 (330)
T ss_dssp CSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECSSS
T ss_pred CCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCCCc
Confidence 75442 234555666666 577888888864
No 252
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.88 E-value=3.6e-05 Score=74.87 Aligned_cols=117 Identities=16% Similarity=0.156 Sum_probs=79.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhhcC-CCCeeecC--CHhHHHhhcCCCcEEEEecCC
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQEG-NLPLYGFH--DPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~~~-~~~~~~~~--s~~e~~~~l~~advIi~~vp~ 79 (484)
+++.|+|.|.+|.+++..|++.|. +|+++||++++.+++.+...... ...+...+ ++.+.+.. +|+||-++|.
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~---~DiVInaTp~ 204 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAA---ADGVVNATPM 204 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHH---SSEEEECSST
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhc---CCEEEECCCC
Confidence 579999999999999999999998 69999999999888765543210 01233333 66666666 9999999997
Q ss_pred CchHHH--HHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 80 GSPVDQ--TIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 80 ~~~v~~--vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
+..-.. .+ -...++++.+|+|.--.+ ..| .+.+..+++|...++
T Consensus 205 Gm~~~~~~pi--~~~~l~~~~~v~DlvY~P-~~T-~ll~~A~~~G~~~~~ 250 (283)
T 3jyo_A 205 GMPAHPGTAF--DVSCLTKDHWVGDVVYMP-IET-ELLKAARALGCETLD 250 (283)
T ss_dssp TSTTSCSCSS--CGGGCCTTCEEEECCCSS-SSC-HHHHHHHHHTCCEEC
T ss_pred CCCCCCCCCC--CHHHhCCCCEEEEecCCC-CCC-HHHHHHHHCcCeEeC
Confidence 522110 01 123567889999987654 333 334455666765543
No 253
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=97.87 E-value=0.00011 Score=72.30 Aligned_cols=96 Identities=15% Similarity=0.245 Sum_probs=66.0
Q ss_pred eEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhh----c-CCCCeeecCCHhHHHhhcCCCcEEEEecC
Q 011501 5 RIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQ----E-GNLPLYGFHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 5 ~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~----~-~~~~~~~~~s~~e~~~~l~~advIi~~vp 78 (484)
||+|||+|.||.+++..|+..|+ +|.++|+++++++........ . ...+++.+.+.+ .++. +|+||++.+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~-a~~~---aD~Vi~~ag 76 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSYE-DMRG---SDIVLVTAG 76 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCGG-GGTT---CSEEEECCS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCHH-HhCC---CCEEEEeCC
Confidence 69999999999999999998888 699999998876543222111 0 011355545653 3444 999999976
Q ss_pred CCc---------------hHHHHHHHHhhhcCCCCEEEecCC
Q 011501 79 AGS---------------PVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 79 ~~~---------------~v~~vl~~l~~~l~~g~iiId~st 105 (484)
.+. .++++++.+..+. ++.++|..||
T Consensus 77 ~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tN 117 (308)
T 2d4a_B 77 IGRKPGMTREQLLEANANTMADLAEKIKAYA-KDAIVVITTN 117 (308)
T ss_dssp CCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCS
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCC
Confidence 653 1455556666664 6667777776
No 254
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.85 E-value=5.8e-05 Score=75.08 Aligned_cols=111 Identities=10% Similarity=0.173 Sum_probs=78.0
Q ss_pred CCCCeEEEEcccHHHH-HHHHHHHhC-CCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEec
Q 011501 1 MVQTRIGLAGLAVMGQ-NLALNIAEK-GFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLV 77 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~-~lA~~L~~~-G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~v 77 (484)
|.++||||||+|.||. ..+..|.+. +.+| .++|+++++ . ++..+++++++++.....|+|++|+
T Consensus 23 M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~------~-------g~~~~~~~~~ll~~~~~vD~V~i~t 89 (330)
T 4ew6_A 23 MSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV------E-------GVNSYTTIEAMLDAEPSIDAVSLCM 89 (330)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC------T-------TSEEESSHHHHHHHCTTCCEEEECS
T ss_pred CCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh------c-------CCCccCCHHHHHhCCCCCCEEEEeC
Confidence 4456899999999998 788888876 5664 578998653 1 3567899999987534589999999
Q ss_pred CCCchHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHcCCeEEec
Q 011501 78 KAGSPVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 78 p~~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
|+..+.+.+...+ ..|+ ++++. -+....+.+++.+..+++|+.+..+
T Consensus 90 p~~~H~~~~~~al----~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~ 138 (330)
T 4ew6_A 90 PPQYRYEAAYKAL----VAGKHVFLEKPPGATLSEVADLEALANKQGASLFAS 138 (330)
T ss_dssp CHHHHHHHHHHHH----HTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred CcHHHHHHHHHHH----HcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCeEEEE
Confidence 9876554443333 3454 44443 1345677778888888888765543
No 255
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.85 E-value=4.2e-05 Score=74.60 Aligned_cols=112 Identities=17% Similarity=0.064 Sum_probs=75.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 3 QTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 3 ~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
..||+|+|+ |.||..+++++.+.|++ .++..+|.+.. +.. +++..+.|++++.+. ..+|++++++|+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~-~V~~V~p~~~g---~~~-----~G~~vy~sl~el~~~-~~~D~viI~tP~~- 75 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTK-MVGGVTPGKGG---TTH-----LGLPVFNTVREAVAA-TGATASVIYVPAP- 75 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTT---CEE-----TTEEEESSHHHHHHH-HCCCEEEECCCGG-
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCCccc---cee-----CCeeccCCHHHHhhc-CCCCEEEEecCHH-
Confidence 468999998 99999999999998998 44444443210 000 146788899999871 1299999999997
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCC-ChHHHHHHHHHHHHcCCeEEe
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNE-WYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~-~~~~~~~~~~~l~~~g~~~i~ 127 (484)
...+++.+.... .. ..+|..++. ...+.+++.+.+++.|+.+++
T Consensus 76 ~~~~~~~ea~~~-Gi-~~iVi~t~G~~~~~~~~l~~~A~~~gv~liG 120 (288)
T 2nu8_A 76 FCKDSILEAIDA-GI-KLIITITEGIPTLDMLTVKVKLDEAGVRMIG 120 (288)
T ss_dssp GHHHHHHHHHHT-TC-SEEEECCCCCCHHHHHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHHHHHC-CC-CEEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 455555555442 11 333444443 444566777777888987764
No 256
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.85 E-value=2e-05 Score=76.19 Aligned_cols=114 Identities=14% Similarity=0.054 Sum_probs=78.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++.|+|+|.+|.+++..|++.|. +|+++||++++.+++.+.... + ++.. .+.+++.. ..+|+||.++|.+..
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~-~--~~~~-~~~~~l~~--~~~DivInaTp~gm~ 194 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH-S--RLRI-SRYEALEG--QSFDIVVNATSASLT 194 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC-T--TEEE-ECSGGGTT--CCCSEEEECSSGGGG
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc-C--CeeE-eeHHHhcc--cCCCEEEECCCCCCC
Confidence 579999999999999999999996 999999999999888776431 0 1222 23344331 349999999987632
Q ss_pred HHH-HHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCe-EEe
Q 011501 83 VDQ-TIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLL-YLG 127 (484)
Q Consensus 83 v~~-vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~-~i~ 127 (484)
-+. .+ -...+.++.+|+|+... |..|. +.+..+++|.. .++
T Consensus 195 ~~~~~i--~~~~l~~~~~V~DlvY~-P~~T~-ll~~A~~~G~~~~~~ 237 (272)
T 3pwz_A 195 ADLPPL--PADVLGEAALAYELAYG-KGLTP-FLRLAREQGQARLAD 237 (272)
T ss_dssp TCCCCC--CGGGGTTCSEEEESSCS-CCSCH-HHHHHHHHSCCEEEC
T ss_pred CCCCCC--CHHHhCcCCEEEEeecC-CCCCH-HHHHHHHCCCCEEEC
Confidence 110 01 01346789999999876 44443 55566777875 443
No 257
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.85 E-value=5.8e-05 Score=74.66 Aligned_cols=116 Identities=14% Similarity=0.001 Sum_probs=80.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCc-EEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHh--------hcCCCcE
Q 011501 3 QTRIGLAGL-AVMGQNLALNIAEKGFP-ISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVH--------SIQKPRV 72 (484)
Q Consensus 3 ~~~IgiIGl-G~mG~~lA~~L~~~G~~-V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~--------~l~~adv 72 (484)
|+||||||+ |.||...+..|.+.+.+ |.++|+++++. .+.+... ....+++.+++.+ .-...|+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~~~~~~~-----~~~~~~~~~~ll~~~~~l~~~~~~~vD~ 76 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVG-IIDSISP-----QSEFFTEFEFFLDHASNLKRDSATALDY 76 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-GGGGTCT-----TCEEESSHHHHHHHHHHHTTSTTTSCCE
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHH-HHHhhCC-----CCcEECCHHHHHHhhhhhhhccCCCCcE
Confidence 579999999 79999999999998876 45789998762 2222111 3577889999873 1135899
Q ss_pred EEEecCCCchHHHHHHHHhhhcCCCCEEEec-CCCChHHHHHHHHHHHHcCCeEEe
Q 011501 73 IIMLVKAGSPVDQTIKTLSVYMEKGDCIIDG-GNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 73 Ii~~vp~~~~v~~vl~~l~~~l~~g~iiId~-st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
|++++|+..+.+.+...+... ..++++. -+..+.+.+++.+..+++|+.+..
T Consensus 77 V~I~tP~~~H~~~~~~al~aG---khVl~EKPla~~~~ea~~l~~~a~~~g~~~~v 129 (318)
T 3oa2_A 77 VSICSPNYLHYPHIAAGLRLG---CDVICEKPLVPTPEMLDQLAVIERETDKRLYN 129 (318)
T ss_dssp EEECSCGGGHHHHHHHHHHTT---CEEEECSSCCSCHHHHHHHHHHHHHHTCCEEE
T ss_pred EEECCCcHHHHHHHHHHHHCC---CeEEEECCCcCCHHHHHHHHHHHHHhCCEEEE
Confidence 999999987766555444332 2355553 234567888888888888876543
No 258
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.85 E-value=2.8e-05 Score=78.68 Aligned_cols=95 Identities=13% Similarity=0.133 Sum_probs=66.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeee----cCCHhHHHhhcCCCcEEEEecCC
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYG----FHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~----~~s~~e~~~~l~~advIi~~vp~ 79 (484)
++|+|+|+|.+|..+++.+...|.+|+++|+++++.+.+.+.... .+.. ..++++++.. +|+||.+++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~----~~~~~~~~~~~l~~~~~~---~DvVi~~~g~ 239 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGG----RVITLTATEANIKKSVQH---ADLLIGAVLV 239 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT----SEEEEECCHHHHHHHHHH---CSEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCc----eEEEecCCHHHHHHHHhC---CCEEEECCCC
Confidence 589999999999999999999999999999999988776553321 1111 1234455555 9999999976
Q ss_pred Cc-hHHHH-HHHHhhhcCCCCEEEecCC
Q 011501 80 GS-PVDQT-IKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 80 ~~-~v~~v-l~~l~~~l~~g~iiId~st 105 (484)
+. ....+ .+...+.+++|.+|||.+.
T Consensus 240 ~~~~~~~li~~~~l~~mk~gg~iV~v~~ 267 (369)
T 2eez_A 240 PGAKAPKLVTRDMLSLMKEGAVIVDVAV 267 (369)
T ss_dssp ------CCSCHHHHTTSCTTCEEEECC-
T ss_pred CccccchhHHHHHHHhhcCCCEEEEEec
Confidence 52 11111 2455677788999999884
No 259
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=97.85 E-value=8.2e-05 Score=73.37 Aligned_cols=98 Identities=13% Similarity=0.110 Sum_probs=62.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC--cEEEEeCChhHHHHH----HHHhhhc-CCCCeeecCCHhHHHhhcCCCcEEEEe
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDET----VERAKQE-GNLPLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~~----~~~~~~~-~~~~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
|||+|||+|.||.++|..|+..|+ +|.++|+++++++.. .+..... ...++..+++ .+.++. +|+||++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~-~~a~~~---aDvVii~ 76 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND-YGPTED---SDVCIIT 76 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS-SGGGTT---CSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC-HHHhCC---CCEEEEC
Confidence 589999999999999999999887 899999999876532 2211100 0001222333 344444 9999999
Q ss_pred cCCCch---------------HHHHHHHHhhhcCCCCEEEecCCC
Q 011501 77 VKAGSP---------------VDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 77 vp~~~~---------------v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
.+.+.. ++++.+.+..+ .+..+++..||-
T Consensus 77 ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvtNP 120 (314)
T 3nep_X 77 AGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTIIVVANP 120 (314)
T ss_dssp CCC-------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEECCSS
T ss_pred CCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEecCCc
Confidence 865421 22333445554 467788888864
No 260
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.84 E-value=0.00013 Score=74.95 Aligned_cols=118 Identities=18% Similarity=0.183 Sum_probs=75.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC-CCc-EEEEeCChhHHHHHHHHh-h------------------hcCCCCeeecCCHh
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEK-GFP-ISVYNRTTSKVDETVERA-K------------------QEGNLPLYGFHDPE 61 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~-G~~-V~v~dr~~~~~~~~~~~~-~------------------~~~~~~~~~~~s~~ 61 (484)
+.||||||+|.||..++..+.+. +.+ |.++|+++++.+.+.++. . ..+ ....++|.+
T Consensus 23 ~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g--~~~v~~D~e 100 (446)
T 3upl_A 23 PIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAG--KIAVTDDND 100 (446)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTT--CEEEESCHH
T ss_pred ceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccC--CceEECCHH
Confidence 35899999999999999888764 444 557899999988876532 1 000 245678999
Q ss_pred HHHhhcCCCcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCC-ChHHHHHHHHHHHHcCCeEE
Q 011501 62 SFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNE-WYENTERRQKAVAELGLLYL 126 (484)
Q Consensus 62 e~~~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~-~~~~~~~~~~~l~~~g~~~i 126 (484)
++++. ...|+|++++|.+..-. +-....++.|+-|+..... ......++.+..++.|+.|.
T Consensus 101 eLL~d-~dIDaVviaTp~p~~H~---e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvvl~ 162 (446)
T 3upl_A 101 LILSN-PLIDVIIDATGIPEVGA---ETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVIYS 162 (446)
T ss_dssp HHHTC-TTCCEEEECSCCHHHHH---HHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHhcC-CCCCEEEEcCCChHHHH---HHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCeee
Confidence 99874 34799999998752212 2223345567777643321 01123345555566676554
No 261
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=97.84 E-value=0.00017 Score=70.64 Aligned_cols=105 Identities=9% Similarity=0.008 Sum_probs=78.8
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHccCCCCCCcccch
Q 011501 321 VDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDP 400 (484)
Q Consensus 321 ~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~Gcii~s~ll~~i~~~~~~~~~~~~ll~~~ 400 (484)
.++++++|+++|.+.++.|++++|++.+.++ +++|..++.++|+.|. .+|+.++........++..+.
T Consensus 167 ~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~------~Gld~~~~~~~l~~~~-~~s~~~~~~~~~~~~~~~~p~----- 234 (297)
T 4gbj_A 167 PGAANVIKLAGNFMIACSLEMMGEAFTMAEK------NGISRQSIYEMLTSTL-FAAPIFQNYGKLVASNTYEPV----- 234 (297)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------TTCCHHHHHHHHHTTT-TCSHHHHHHHHHHHHTCCCSC-----
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHhhc-ccCchhhccCccccCCCCCCc-----
Confidence 4789999999999999999999999999875 3499999999999884 688888776555444321110
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011501 401 EFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLAYFDT 439 (484)
Q Consensus 401 ~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~~~~~ 439 (484)
-|.-.+ ..-+++-++..|-+.|+|+|....+..+|..
T Consensus 235 ~f~~~l--~~KDl~l~~~~A~~~g~~~p~~~~~~~~~~~ 271 (297)
T 4gbj_A 235 AFRFPL--GLKDINLTLQTASDVNAPMPFADIIRNRFIS 271 (297)
T ss_dssp SSBHHH--HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred cchhHH--HHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 121111 2235677889999999999999888876653
No 262
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=97.80 E-value=0.00015 Score=71.64 Aligned_cols=99 Identities=11% Similarity=0.158 Sum_probs=63.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC--cEEEEeCChhHHHHHHHHhhhc--CCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKQE--GNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~~~~~~~~~--~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
+||+|||+|.+|.+++..|+..+. ++.++|+++++++......... ...+++...+..+.++. +|+||++.+.
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~---aDvVii~ag~ 82 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKD---ADLVVITAGA 82 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTT---CSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCC---CCEEEECCCC
Confidence 699999999999999999998876 8999999998876533322110 00022233333444444 9999999865
Q ss_pred Cc---------------hHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 80 GS---------------PVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 80 ~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
+. .++++.+.+..+ .++.+|+..||-
T Consensus 83 ~~~~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNP 123 (318)
T 1ez4_A 83 PQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAANP 123 (318)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHT-TCCSEEEECSSS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeCCc
Confidence 52 133333455555 466777777553
No 263
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.80 E-value=6.9e-05 Score=73.90 Aligned_cols=115 Identities=18% Similarity=0.116 Sum_probs=80.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCc-EEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHh-------hcCCCcEE
Q 011501 3 QTRIGLAGL-AVMGQNLALNIAEKGFP-ISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVH-------SIQKPRVI 73 (484)
Q Consensus 3 ~~~IgiIGl-G~mG~~lA~~L~~~G~~-V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~-------~l~~advI 73 (484)
|+||||||+ |.||...+..+.+.+.+ |.++|+++++. .+.+... ....+++.+++.+ .-...|+|
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~~~~~~~-----~~~~~~~~~~ll~~~~~l~~~~~~vD~V 76 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVG-LVDSFFP-----EAEFFTEPEAFEAYLEDLRDRGEGVDYL 76 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-GGGGTCT-----TCEEESCHHHHHHHHHHHHHTTCCCSEE
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHH-HHHhhCC-----CCceeCCHHHHHHHhhhhcccCCCCcEE
Confidence 579999999 78999999999998876 45789998763 2222111 3577889999872 11458999
Q ss_pred EEecCCCchHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHcCCeEEe
Q 011501 74 IMLVKAGSPVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 74 i~~vp~~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
++|+|+..+.+.+...+. .|+ ++++. -+....+.+++.+..+++|+.+..
T Consensus 77 ~I~tP~~~H~~~~~~al~----aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v 128 (312)
T 3o9z_A 77 SIASPNHLHYPQIRMALR----LGANALSEKPLVLWPEEIARLKELEARTGRRVYT 128 (312)
T ss_dssp EECSCGGGHHHHHHHHHH----TTCEEEECSSSCSCHHHHHHHHHHHHHHCCCEEE
T ss_pred EECCCchhhHHHHHHHHH----CCCeEEEECCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 999999877665544443 344 55553 234567888888888888876543
No 264
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.79 E-value=5.9e-05 Score=74.85 Aligned_cols=125 Identities=14% Similarity=0.160 Sum_probs=77.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC---------CCcE-EEEeCChhHHH-----H-HHHHhhhcCCCCeeecC--CHhHHH
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEK---------GFPI-SVYNRTTSKVD-----E-TVERAKQEGNLPLYGFH--DPESFV 64 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~---------G~~V-~v~dr~~~~~~-----~-~~~~~~~~~~~~~~~~~--s~~e~~ 64 (484)
|+||||||+|.||..++..|.++ +.+| .++|+++.+.+ . +...... ...++ ++++++
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~-----~~~~~~~d~~~ll 76 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRET-----GMLRDDAKAIEVV 76 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHH-----SSCSBCCCHHHHH
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccC-----ccccCCCCHHHHh
Confidence 46999999999999999999875 4444 46788865422 1 2111111 12344 899998
Q ss_pred hhcCCCcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCChH-HHHHHHHHHHHcCCeEE-eccCCCC
Q 011501 65 HSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYE-NTERRQKAVAELGLLYL-GMGVSGG 133 (484)
Q Consensus 65 ~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~-~~~~~~~~l~~~g~~~i-~~pv~gg 133 (484)
+. ...|+|+.|+|+..+..+..+.....+..|.-|+..+..... ...++.+..+++|+.|+ .+-+.++
T Consensus 77 ~~-~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~~~~ea~v~~g 146 (327)
T 3do5_A 77 RS-ADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLMYEATVGGA 146 (327)
T ss_dssp HH-SCCSEEEECCCCC----CHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCCEECGGGSSTT
T ss_pred cC-CCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCcEEEEEEeeec
Confidence 75 348999999998754212334445667788888877553322 33455556667787654 4444443
No 265
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=97.77 E-value=0.00021 Score=70.89 Aligned_cols=100 Identities=11% Similarity=0.128 Sum_probs=64.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCC--cEEEEeCChhHHHHHHHHhhhc--CCCCeeecCCHhHHHhhcCCCcEEEEecC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKQE--GNLPLYGFHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~~~~~~~~~--~~~~~~~~~s~~e~~~~l~~advIi~~vp 78 (484)
.+||+|||+|.+|.+++..|+..+. ++.++|+++++++......... ...+++...+..+.++. +|+||++.+
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~---aDvVii~ag 85 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKD---ADLVVITAG 85 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGG---CSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCC---CCEEEEcCC
Confidence 4699999999999999999998876 8999999998876543322110 00122333344444555 999999986
Q ss_pred CCch---------------HHHHHHHHhhhcCCCCEEEecCCC
Q 011501 79 AGSP---------------VDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 79 ~~~~---------------v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
.+.. ++++.+.+..+ .++.+|+..||-
T Consensus 86 ~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNP 127 (326)
T 2zqz_A 86 APQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLVAANP 127 (326)
T ss_dssp CC-----CHHHHHHHHHHHHHHHHHHHHHH-TCCSEEEECSSS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCc
Confidence 6521 22333455555 466777777553
No 266
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.76 E-value=6.9e-05 Score=73.24 Aligned_cols=110 Identities=12% Similarity=0.064 Sum_probs=77.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHh----CCCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEec
Q 011501 3 QTRIGLAGLAVMGQNLALNIAE----KGFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLV 77 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~----~G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~v 77 (484)
++||||||+|.||...+..+.+ .+.++ .++|++.. .+. +++. ..+++++++. ...|+|++++
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~-----a~~------~g~~-~~~~~ell~~-~~vD~V~i~t 73 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL-----GSL------DEVR-QISLEDALRS-QEIDVAYICS 73 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC-----CEE------TTEE-BCCHHHHHHC-SSEEEEEECS
T ss_pred cceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH-----HHH------cCCC-CCCHHHHhcC-CCCCEEEEeC
Confidence 4689999999999999998875 34554 47788642 111 1233 5799998873 2379999999
Q ss_pred CCCchHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 78 KAGSPVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 78 p~~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
|+..+.+.+...+ +.|+ ++++. -+..+.+.+++.+..+++|+.+..+.
T Consensus 74 p~~~H~~~~~~al----~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~~ 123 (294)
T 1lc0_A 74 ESSSHEDYIRQFL----QAGKHVLVEYPMTLSFAAAQELWELAAQKGRVLHEEH 123 (294)
T ss_dssp CGGGHHHHHHHHH----HTTCEEEEESCSCSCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CcHhHHHHHHHHH----HCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEE
Confidence 9987766554433 3455 66664 45567788888888888888766554
No 267
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=97.74 E-value=0.0002 Score=70.51 Aligned_cols=99 Identities=11% Similarity=0.198 Sum_probs=64.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhCC--CcEEEEeCChhHHHHHHHHhhhcC--CCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKG--FPISVYNRTTSKVDETVERAKQEG--NLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G--~~V~v~dr~~~~~~~~~~~~~~~~--~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
|||+|||+|.+|.+++..|+..+ .++.++|+++++++.......... ..+++...+..+.++. +|+||++.+.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~---aD~Vii~ag~ 77 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEG---ARAVVLAAGV 77 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTT---EEEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCC---CCEEEECCCC
Confidence 58999999999999999999887 589999999887765333221100 0012222222333444 9999999866
Q ss_pred Cch---------------HHHHHHHHhhhcCCCCEEEecCCC
Q 011501 80 GSP---------------VDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 80 ~~~---------------v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
+.. ++++.+.+..+ .+..+|+..||-
T Consensus 78 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNP 118 (310)
T 2xxj_A 78 AQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLLVATNP 118 (310)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECSSS
T ss_pred CCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEecCc
Confidence 532 33344555555 466777777653
No 268
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=97.73 E-value=0.00015 Score=75.03 Aligned_cols=75 Identities=11% Similarity=0.108 Sum_probs=54.2
Q ss_pred CCeEEEEcccHH-HHHHHHHHHhC-----CCcEEEEeCCh--hHHHHHHH---Hhh-hcC-CCCeeecCCHhHHHhhcCC
Q 011501 3 QTRIGLAGLAVM-GQNLALNIAEK-----GFPISVYNRTT--SKVDETVE---RAK-QEG-NLPLYGFHDPESFVHSIQK 69 (484)
Q Consensus 3 ~~~IgiIGlG~m-G~~lA~~L~~~-----G~~V~v~dr~~--~~~~~~~~---~~~-~~~-~~~~~~~~s~~e~~~~l~~ 69 (484)
.+||+|||.|.+ |.+++..|+.+ +.+|.+||+++ ++++.... ... ..+ ..+++.+++..+.++.
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~g--- 83 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDG--- 83 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTT---
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCC---
Confidence 368999999999 88888888874 56899999999 87665321 110 000 1135666788777776
Q ss_pred CcEEEEecCCC
Q 011501 70 PRVIIMLVKAG 80 (484)
Q Consensus 70 advIi~~vp~~ 80 (484)
+|+||+++|.+
T Consensus 84 AD~VVitagv~ 94 (450)
T 1s6y_A 84 ADFVTTQFRVG 94 (450)
T ss_dssp CSEEEECCCTT
T ss_pred CCEEEEcCCCC
Confidence 99999999875
No 269
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.72 E-value=0.00011 Score=75.63 Aligned_cols=118 Identities=15% Similarity=0.250 Sum_probs=76.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhC----------CCc-EEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcE
Q 011501 4 TRIGLAGLAVMGQNLALNIAEK----------GFP-ISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRV 72 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~----------G~~-V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~adv 72 (484)
.+|||||+|.||..++..|.++ +.+ +.++|+++++.+.+.. ....+++++++++. ...|+
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~--------~~~~~~d~~ell~d-~diDv 81 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAG--------GLPLTTNPFDVVDD-PEIDI 81 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHT--------TCCEESCTHHHHTC-TTCCE
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcc--------cCcccCCHHHHhcC-CCCCE
Confidence 4899999999999999877642 344 4578999988766521 14567899999874 34799
Q ss_pred EEEecCCCchHHHHHHHHhhhcCCCCEEEecCCC-ChHHHHHHHHHHHHcCCeE-EeccCCCC
Q 011501 73 IIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNE-WYENTERRQKAVAELGLLY-LGMGVSGG 133 (484)
Q Consensus 73 Ii~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~-~~~~~~~~~~~l~~~g~~~-i~~pv~gg 133 (484)
|+.++|......+.+ ...+..|.-|+..... ......++.+..+++|+.| +.+.+.++
T Consensus 82 Vve~tp~~~~h~~~~---~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~l~~Ea~V~~g 141 (444)
T 3mtj_A 82 VVELIGGLEPARELV---MQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVMVTFEAAVAGG 141 (444)
T ss_dssp EEECCCSSTTHHHHH---HHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEECGGGSSTT
T ss_pred EEEcCCCchHHHHHH---HHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCeEEEEEeeeCC
Confidence 999999632333332 2345567777654331 1122345555666778877 35555443
No 270
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.72 E-value=0.00011 Score=75.15 Aligned_cols=120 Identities=17% Similarity=0.141 Sum_probs=76.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC---cEEEEeCChhHHHHHHHHhhhcCCCCeee----cCC---HhHHHhhcCCCcEE
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF---PISVYNRTTSKVDETVERAKQEGNLPLYG----FHD---PESFVHSIQKPRVI 73 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~---~V~v~dr~~~~~~~~~~~~~~~~~~~~~~----~~s---~~e~~~~l~~advI 73 (484)
++|+|+|+|.+|..++..|+++|. +|.++||++++.+++.+.....++.++.. ..+ ++++++.. ++|+|
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-~~DvV 80 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-KPQIV 80 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-CCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-CCCEE
Confidence 689999999999999999999983 89999999999888776543210001111 122 33344321 27999
Q ss_pred EEecCCCchHHHHHHHHhhhcCCCCEEEecCCCChH--------HHHHHHHHHHHcCCeEEec
Q 011501 74 IMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYE--------NTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 74 i~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~--------~~~~~~~~l~~~g~~~i~~ 128 (484)
|.+.|... ...+++.. +..|..++|.+...+. ...++.+.+++.|+.++..
T Consensus 81 in~ag~~~-~~~v~~a~---l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g 139 (405)
T 4ina_A 81 LNIALPYQ-DLTIMEAC---LRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLG 139 (405)
T ss_dssp EECSCGGG-HHHHHHHH---HHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEEC
T ss_pred EECCCccc-ChHHHHHH---HHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEc
Confidence 99987653 23343333 3456778887554332 2234556666777765543
No 271
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.71 E-value=8.2e-05 Score=73.72 Aligned_cols=131 Identities=13% Similarity=0.166 Sum_probs=77.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC-------CCcE-EEEeCChhH------HHHHHHHhhhcCCCCeeecCCHhHHHhh
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEK-------GFPI-SVYNRTTSK------VDETVERAKQEGNLPLYGFHDPESFVHS 66 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~-------G~~V-~v~dr~~~~------~~~~~~~~~~~~~~~~~~~~s~~e~~~~ 66 (484)
|.+.+|+|||+|.||+.++..|.++ +.+| .++|++++. .+.+.+.....+...-... +..+++..
T Consensus 2 Mk~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~-d~~e~l~~ 80 (325)
T 3ing_A 2 MKEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAF-SGPEDLMG 80 (325)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBC-CSGGGGTT
T ss_pred CceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccC-CHHHHhcC
Confidence 5567899999999999999999874 3344 466887642 1222211111000000012 66676654
Q ss_pred cCCCcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCCh-HHHHHHHHHHHHcCCeE-EeccCCCC
Q 011501 67 IQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWY-ENTERRQKAVAELGLLY-LGMGVSGG 133 (484)
Q Consensus 67 l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~-~~~~~~~~~l~~~g~~~-i~~pv~gg 133 (484)
...|+|+.|+|+....+...+.....+..|.-||.++.... ....++.+..+++|..| +++.+.+|
T Consensus 81 -~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g~~~~~Ea~vg~g 148 (325)
T 3ing_A 81 -EAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNSKYIRYEATVAGG 148 (325)
T ss_dssp -SCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSSTT
T ss_pred -CCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcCCeEEEEeeeccc
Confidence 34899999999864444444555566778888887766322 23445555566678755 44555544
No 272
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=97.71 E-value=0.00031 Score=69.67 Aligned_cols=99 Identities=14% Similarity=0.196 Sum_probs=66.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCC--cEEEEeCChhHHHHHHHHhhhc----CCCCeeecCCHhHHHhhcCCCcEEEEe
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKQE----GNLPLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~~~~~~~~~----~~~~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
.+||+|||+|.||.++|..|+.+|+ +|.++|+++++++......... ....+....++++ ++. +|+||++
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~~-~~~---aDiVvi~ 94 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYSV-TAN---SKLVIIT 94 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGGG-GTT---EEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHHH-hCC---CCEEEEc
Confidence 4799999999999999999999997 8999999988766533222110 0002334556654 444 9999998
Q ss_pred cCCCc---------------hHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 77 VKAGS---------------PVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 77 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
...+. .++++.+.+..+ .++.+++..||-
T Consensus 95 aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvtNP 138 (331)
T 4aj2_A 95 AGARQQEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKLLIVSNP 138 (331)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECSSS
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCh
Confidence 74331 133444556665 567788888864
No 273
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.71 E-value=7.9e-05 Score=72.55 Aligned_cols=116 Identities=16% Similarity=0.103 Sum_probs=75.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCC----CeeecCCHhHHHhhcCCCcEEEEecC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNL----PLYGFHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~----~~~~~~s~~e~~~~l~~advIi~~vp 78 (484)
.+++.|+|.|.+|.++|..|++.| +|+++||++++.+++.+.....+.. .+... +.. +.+.++|+||.++|
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~-~~~---~~~~~~DilVn~ag 202 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFS-GLD---VDLDGVDIIINATP 202 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEE-CTT---CCCTTCCEEEECSC
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEe-eHH---HhhCCCCEEEECCC
Confidence 357999999999999999999999 9999999999887776543210000 01111 222 23345999999998
Q ss_pred CCchH--HHH-HHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEE
Q 011501 79 AGSPV--DQT-IKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYL 126 (484)
Q Consensus 79 ~~~~v--~~v-l~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i 126 (484)
.+..- +.. +. -...++++.+++|++.. |..+ .+.+..+++|..++
T Consensus 203 ~~~~~~~~~~~~~-~~~~l~~~~~v~Dv~y~-p~~t-~ll~~a~~~G~~~~ 250 (287)
T 1nvt_A 203 IGMYPNIDVEPIV-KAEKLREDMVVMDLIYN-PLET-VLLKEAKKVNAKTI 250 (287)
T ss_dssp TTCTTCCSSCCSS-CSTTCCSSSEEEECCCS-SSSC-HHHHHHHTTTCEEE
T ss_pred CCCCCCCCCCCCC-CHHHcCCCCEEEEeeeC-CccC-HHHHHHHHCCCEEe
Confidence 76321 000 00 12356789999999874 4444 34555666777654
No 274
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=97.70 E-value=0.00026 Score=70.13 Aligned_cols=100 Identities=11% Similarity=0.124 Sum_probs=65.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCC--cEEEEeCChhHHHHHHHHhhhcCC--CCeeecCCHhHHHhhcCCCcEEEEecC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKQEGN--LPLYGFHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~~~~~~~~~~~--~~~~~~~s~~e~~~~l~~advIi~~vp 78 (484)
.+||+|||+|.||.++|..|+..|+ +|.++|+++++++........... .+++...+..+.++. +|+||++..
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~---aDiVvi~ag 85 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKD---ADLVVITAG 85 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTT---CSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcC---CCEEEECCC
Confidence 4799999999999999999999887 899999999877644322211000 023333343444444 999999875
Q ss_pred CCc---------------hHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 79 AGS---------------PVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 79 ~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
.+. .++++.+.+..+ .++.+++..||-
T Consensus 86 ~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~ilvvtNP 127 (326)
T 3vku_A 86 APQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLVAANP 127 (326)
T ss_dssp CC----------------CHHHHHHHHHTT-TCCSEEEECSSS
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEccCc
Confidence 431 123344555554 366778877763
No 275
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.68 E-value=6.3e-05 Score=74.90 Aligned_cols=115 Identities=8% Similarity=0.097 Sum_probs=76.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEE-EEeCCh-hHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPIS-VYNRTT-SKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAG 80 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~-v~dr~~-~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 80 (484)
++||||||+|.+|...+..| ..+.+|. ++|+++ ++.+.+.+...+. +.+...++|++++++. ...|+|++|+|+.
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~-~~vD~V~I~tp~~ 78 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEM-NIKPKKYNNWWEMLEK-EKPDILVINTVFS 78 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTT-TCCCEECSSHHHHHHH-HCCSEEEECSSHH
T ss_pred ceEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHc-CCCCcccCCHHHHhcC-CCCCEEEEeCCcc
Confidence 46999999999998887777 5566655 789987 4444444332111 1124678999999875 2489999999988
Q ss_pred chHHHHHHHHhhhcCCCC-EEEec-CCCChHHHHHHHHHHHHcCCe
Q 011501 81 SPVDQTIKTLSVYMEKGD-CIIDG-GNEWYENTERRQKAVAELGLL 124 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~ 124 (484)
.+.+.+...+. .|+ ++++. -+....+.+++.+..++.|..
T Consensus 79 ~H~~~~~~al~----aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 120 (337)
T 3ip3_A 79 LNGKILLEALE----RKIHAFVEKPIATTFEDLEKIRSVYQKVRNE 120 (337)
T ss_dssp HHHHHHHHHHH----TTCEEEECSSSCSSHHHHHHHHHHHHHHTTT
T ss_pred hHHHHHHHHHH----CCCcEEEeCCCCCCHHHHHHHHHHHHHhCCc
Confidence 66555444433 444 45542 233456777888877777764
No 276
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.68 E-value=9.6e-05 Score=74.44 Aligned_cols=99 Identities=12% Similarity=0.166 Sum_probs=68.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCe-eecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPL-YGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
.+|.|+|+|.+|...++.+...|.+|+++||++++.+.+.+.+... + ....+.+++.+.+..+|+||.+++.+..
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~ 243 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR----VELLYSNSAEIETAVAEADLLIGAVLVPGR 243 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG----SEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCce----eEeeeCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 5899999999999999999999999999999999988877655321 1 1112333333333349999999976431
Q ss_pred H-HH-HHHHHhhhcCCCCEEEecCCC
Q 011501 83 V-DQ-TIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 83 v-~~-vl~~l~~~l~~g~iiId~st~ 106 (484)
. .. +.+.....++++.+|+|.+..
T Consensus 244 ~~~~li~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 244 RAPILVPASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp SCCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred CCCeecCHHHHhhCCCCCEEEEEecC
Confidence 0 00 012344567788888888754
No 277
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.67 E-value=0.00011 Score=69.03 Aligned_cols=113 Identities=6% Similarity=-0.009 Sum_probs=73.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeec-CCHhHHHh-hcCCCcEEEEecCCCc
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGF-HDPESFVH-SIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~-~s~~e~~~-~l~~advIi~~vp~~~ 81 (484)
++|.|+|+|.+|..++..|.+.|+ |+++|+++++++.+. .+.. -+... ++.+.+.+ .++++|.||++++++
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~----~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d- 82 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGAN----FVHGDPTRVSDLEKANVRGARAVIVDLESD- 82 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCE----EEESCTTCHHHHHHTTCTTCSEEEECCSCH-
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCe----EEEcCCCCHHHHHhcCcchhcEEEEcCCCc-
Confidence 579999999999999999999999 999999999887765 3211 01111 23333322 256799999999886
Q ss_pred hHHHHHHHHhhhcCCC-CEEEecCCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 82 PVDQTIKTLSVYMEKG-DCIIDGGNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g-~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
.....+...+..+.++ .+|...++.. .. +.+...|+..+-.|
T Consensus 83 ~~n~~~~~~a~~~~~~~~iia~~~~~~--~~----~~l~~~G~~~vi~p 125 (234)
T 2aef_A 83 SETIHCILGIRKIDESVRIIAEAERYE--NI----EQLRMAGADQVISP 125 (234)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEECSSGG--GH----HHHHHHTCSEEECH
T ss_pred HHHHHHHHHHHHHCCCCeEEEEECCHh--HH----HHHHHCCCCEEECH
Confidence 3333333444445555 6777766543 22 23344577665444
No 278
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.67 E-value=6.7e-05 Score=76.25 Aligned_cols=92 Identities=16% Similarity=0.142 Sum_probs=63.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeec--CC----------------------
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGF--HD---------------------- 59 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~--~s---------------------- 59 (484)
.+|+|+|+|.+|...++.+...|.+|+++|+++++.+.+...+. ... ++
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga-------~~~~i~~~~~~~~~~~~~~~~~~s~~~~~ 245 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGG-------KFITVDDEAMKTAETAGGYAKEMGEEFRK 245 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTC-------EECCC-----------------------C
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC-------eEEeecccccccccccccchhhcCHHHHh
Confidence 58999999999999999999999999999999988776655332 111 01
Q ss_pred -----HhHHHhhcCCCcEEEEecCCC-chHHHHH-HHHhhhcCCCCEEEecCC
Q 011501 60 -----PESFVHSIQKPRVIIMLVKAG-SPVDQTI-KTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 60 -----~~e~~~~l~~advIi~~vp~~-~~v~~vl-~~l~~~l~~g~iiId~st 105 (484)
+.+.+. .+|+||.+++.+ .....++ ++....+++|.+|||.+.
T Consensus 246 ~~~~~l~~~~~---~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~ 295 (384)
T 1l7d_A 246 KQAEAVLKELV---KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV 295 (384)
T ss_dssp CHHHHHHHHHT---TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred hhHHHHHHHhC---CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEec
Confidence 333343 499999888221 0111111 344566788899999873
No 279
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=97.67 E-value=8.6e-05 Score=72.83 Aligned_cols=108 Identities=18% Similarity=0.072 Sum_probs=75.8
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHccCCCCCCcc---
Q 011501 321 VDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVL--- 397 (484)
Q Consensus 321 ~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~Gcii~s~ll~~i~~~~~~~~~~~~ll--- 397 (484)
.++++.+|+++|.+.++.|++++|++.+.++. ++|...+.++|+.|. -+|+.++........ ..+..
T Consensus 166 ~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~------Gld~~~~~~vl~~~~-~~s~~~~~~~p~~~~---~~~~~~~~ 235 (300)
T 3obb_A 166 DGAGQVAKVCNNQLLAVLMIGTAEAMALGVAN------GLEAKVLAEIMRRSS-GGNWALEVYNPWPGV---MENAPASR 235 (300)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCCHHHHHHHHHTST-TCCHHHHHCCCSTTT---STTSGGGG
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CCCHHHHHHHHHhCc-ccchHHHhhccccch---hhhccccc
Confidence 47899999999999999999999999998763 499999999999874 467766532111000 00000
Q ss_pred -cchhHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHhh
Q 011501 398 -VDPEFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLAYFDTY 440 (484)
Q Consensus 398 -~~~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~~~~~~ 440 (484)
.++.|.-.+ ..-+++.++..|.+.|+|+|..+.+..+|...
T Consensus 236 ~~~~~f~~~l--~~KDl~l~~~~A~~~g~~~p~~~~a~~~~~~a 277 (300)
T 3obb_A 236 DYSGGFMAQL--MAKDLGLAQEAAQASASSTPMGSLALSLYRLL 277 (300)
T ss_dssp TTCSSSBHHH--HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred cCCccchHHH--HHHHHHHHHHHHHHcCCCChHHHHHHHHHHHH
Confidence 012222221 23456788899999999999999998866543
No 280
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.64 E-value=7.5e-05 Score=72.09 Aligned_cols=97 Identities=18% Similarity=0.163 Sum_probs=64.2
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhC-CCcEE-EEeCChhHH-----HHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcE
Q 011501 1 MVQTRIGLAG-LAVMGQNLALNIAEK-GFPIS-VYNRTTSKV-----DETVERAKQEGNLPLYGFHDPESFVHSIQKPRV 72 (484)
Q Consensus 1 M~~~~IgiIG-lG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~-----~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~adv 72 (484)
|+|+||+|+| +|.||+.+++.+.+. ++++. ++|++++.. .++.. .. .++..+++++++++. +|+
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g--~~---~gv~v~~dl~~ll~~---~DV 76 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLG--KQ---TGVALTDDIERVCAE---ADY 76 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTT--CC---CSCBCBCCHHHHHHH---CSE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhC--CC---CCceecCCHHHHhcC---CCE
Confidence 7778999999 899999999998865 56655 479875321 01110 00 035667899998887 999
Q ss_pred EEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCChH
Q 011501 73 IIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYE 109 (484)
Q Consensus 73 Ii~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~ 109 (484)
||-++++. .+.+.+... +..|.-+|.++|....
T Consensus 77 VIDfT~p~-a~~~~~~~a---l~~G~~vVigTTG~s~ 109 (272)
T 4f3y_A 77 LIDFTLPE-GTLVHLDAA---LRHDVKLVIGTTGFSE 109 (272)
T ss_dssp EEECSCHH-HHHHHHHHH---HHHTCEEEECCCCCCH
T ss_pred EEEcCCHH-HHHHHHHHH---HHcCCCEEEECCCCCH
Confidence 99988654 444444333 4456667777776543
No 281
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.60 E-value=0.00021 Score=70.40 Aligned_cols=121 Identities=17% Similarity=0.193 Sum_probs=77.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCC---hhHHHHHHHHhhhcCCCCee--ecCCHhHHHhhcCCCcEEEEec
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRT---TSKVDETVERAKQEGNLPLY--GFHDPESFVHSIQKPRVIIMLV 77 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~---~~~~~~~~~~~~~~~~~~~~--~~~s~~e~~~~l~~advIi~~v 77 (484)
+++.|+|.|.+|.+++..|++.|. +|++++|+ .++.+++.++.....+..+. ..++.+++.+.+..+|+||-++
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIINaT 234 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNAT 234 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEECc
Confidence 578999999999999999999998 89999999 88888776553321000111 2233333332233499999999
Q ss_pred CCCchHH--H-HHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 78 KAGSPVD--Q-TIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 78 p~~~~v~--~-vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
|.+-.-. . .+. ....++++.+|+|.--.+. .| .+.+..+++|...++
T Consensus 235 p~Gm~~~~~~~p~~-~~~~l~~~~~V~DlvY~P~-~T-~ll~~A~~~G~~~~~ 284 (315)
T 3tnl_A 235 GVGMKPFEGETLLP-SADMLRPELIVSDVVYKPT-KT-RLLEIAEEQGCQTLN 284 (315)
T ss_dssp STTSTTSTTCCSCC-CGGGCCTTCEEEESCCSSS-SC-HHHHHHHHTTCEEEC
T ss_pred cCCCCCCCCCCCCC-cHHHcCCCCEEEEeccCCC-CC-HHHHHHHHCCCeEeC
Confidence 9762211 0 000 1234678899999876543 33 344555677776543
No 282
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.56 E-value=0.00014 Score=70.84 Aligned_cols=112 Identities=16% Similarity=0.085 Sum_probs=75.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 3 QTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 3 ~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
.+||+|+|+ |.||..+++++.+.|++ .++..+|.+.. +.. .++..+.+++++.+.. .+|++++++|+.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~-~v~~VnP~~~g---~~i-----~G~~vy~sl~el~~~~-~~Dv~Ii~vp~~- 75 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTK-IVAGVTPGKGG---MEV-----LGVPVYDTVKEAVAHH-EVDASIIFVPAP- 75 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTT---CEE-----TTEEEESSHHHHHHHS-CCSEEEECCCHH-
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCe-EEEEECCCCCC---ceE-----CCEEeeCCHHHHhhcC-CCCEEEEecCHH-
Confidence 368999998 99999999999999998 44444443210 000 1477888999998721 299999999986
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCCCh-HHHHHHHHHHHHcCCeEEe
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNEWY-ENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~~~-~~~~~~~~~l~~~g~~~i~ 127 (484)
.+.+++++....- -..+|+ .++..+ .+..++.+.+++.|+.+++
T Consensus 76 ~~~~~~~ea~~~G-i~~vVi-~t~G~~~~~~~~l~~~a~~~gi~vig 120 (288)
T 1oi7_A 76 AAADAALEAAHAG-IPLIVL-ITEGIPTLDMVRAVEEIKALGSRLIG 120 (288)
T ss_dssp HHHHHHHHHHHTT-CSEEEE-CCSCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHCC-CCEEEE-ECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 6666666665531 222444 444443 3455677777778987765
No 283
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.55 E-value=0.00041 Score=68.40 Aligned_cols=96 Identities=11% Similarity=0.116 Sum_probs=61.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCC--CcEEEEeCChhHHHHHHHHhhhc-CCCCeee---cCCHhHHHhhcCCCcEEEEe
Q 011501 4 TRIGLAGL-AVMGQNLALNIAEKG--FPISVYNRTTSKVDETVERAKQE-GNLPLYG---FHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 4 ~~IgiIGl-G~mG~~lA~~L~~~G--~~V~v~dr~~~~~~~~~~~~~~~-~~~~~~~---~~s~~e~~~~l~~advIi~~ 76 (484)
|||+|||. |.+|.+++..|+..| .+|.++|+++.. ......... ...++.. ++++++.++. +|+||++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~--~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~---aDvVvi~ 75 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP--GVAADLSHIETRATVKGYLGPEQLPDCLKG---CDVVVIP 75 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH--HHHHHHTTSSSSCEEEEEESGGGHHHHHTT---CSEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccH--HHHHHHhccCcCceEEEecCCCCHHHHhCC---CCEEEEC
Confidence 48999998 999999999999988 689999999722 111111110 0001333 2456666666 9999999
Q ss_pred cCCCc---------------hHHHHHHHHhhhcCCCCEEEecCC
Q 011501 77 VKAGS---------------PVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 77 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st 105 (484)
...+. .++++++.+..+. ++.+||..||
T Consensus 76 ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~sN 118 (314)
T 1mld_A 76 AGVPRKPGMTRDDLFNTNATIVATLTAACAQHC-PDAMICIISN 118 (314)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSS
T ss_pred CCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECC
Confidence 85432 2444555666655 5556666655
No 284
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.53 E-value=0.00018 Score=69.85 Aligned_cols=109 Identities=16% Similarity=0.029 Sum_probs=74.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++.|+|+|.+|.+++..|.+.|. +|+++||++++.+++.+.. . ..+.+++.+ + .+|+||-++|.+..
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~--------~-~~~~~~l~~-l-~~DivInaTp~Gm~ 191 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF--------K-VISYDELSN-L-KGDVIINCTPKGMY 191 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTS--------E-EEEHHHHTT-C-CCSEEEECSSTTST
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhc--------C-cccHHHHHh-c-cCCEEEECCccCcc
Confidence 579999999999999999999998 8999999999987776422 1 113333333 3 49999999987521
Q ss_pred H--HH-HHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 83 V--DQ-TIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 83 v--~~-vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
- +. .+ -...++++.+|+|..-.+ ..| .+.+..+++|...++
T Consensus 192 ~~~~~~pi--~~~~l~~~~~v~DlvY~P-~~T-~ll~~A~~~G~~~~~ 235 (282)
T 3fbt_A 192 PKEGESPV--DKEVVAKFSSAVDLIYNP-VET-LFLKYARESGVKAVN 235 (282)
T ss_dssp TSTTCCSS--CHHHHTTCSEEEESCCSS-SSC-HHHHHHHHTTCEEEC
T ss_pred CCCccCCC--CHHHcCCCCEEEEEeeCC-CCC-HHHHHHHHCcCeEeC
Confidence 1 10 01 012356789999987554 333 345556677876554
No 285
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.49 E-value=0.00028 Score=68.94 Aligned_cols=109 Identities=15% Similarity=0.084 Sum_probs=75.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHh--hcCCCcEEEEecCCC
Q 011501 4 TRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVH--SIQKPRVIIMLVKAG 80 (484)
Q Consensus 4 ~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~--~l~~advIi~~vp~~ 80 (484)
.++.|+|+ |.||..+++++.+.|++ .+|..+|.+... .. +++..+.+++++.+ . +|++++++|+.
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~-~V~~VnP~~~g~---~i-----~G~~vy~sl~el~~~~~---~Dv~ii~vp~~ 81 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTK-IVGGVTPGKGGQ---NV-----HGVPVFDTVKEAVKETD---ANASVIFVPAP 81 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCC-EEEEECTTCTTC---EE-----TTEEEESSHHHHHHHHC---CCEEEECCCHH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCe-EEEEeCCCCCCc---eE-----CCEeeeCCHHHHhhcCC---CCEEEEccCHH
Confidence 46888898 99999999999999998 666666653200 00 14778899999987 5 99999999986
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCC-ChHHHHHHHHHHHHcCCeEEe
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNE-WYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~-~~~~~~~~~~~l~~~g~~~i~ 127 (484)
.+.+++++.... .. ..+|..++. ...+..++.+.+++.|+.+++
T Consensus 82 -~~~~~v~ea~~~-Gi-~~vVi~t~G~~~~~~~~l~~~A~~~gi~viG 126 (294)
T 2yv1_A 82 -FAKDAVFEAIDA-GI-ELIVVITEHIPVHDTMEFVNYAEDVGVKIIG 126 (294)
T ss_dssp -HHHHHHHHHHHT-TC-SEEEECCSCCCHHHHHHHHHHHHHHTCEEEC
T ss_pred -HHHHHHHHHHHC-CC-CEEEEECCCCCHHHHHHHHHHHHHcCCEEEc
Confidence 566666665553 12 323444444 334456677777778987764
No 286
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.49 E-value=0.0003 Score=70.03 Aligned_cols=94 Identities=10% Similarity=0.160 Sum_probs=62.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCC-CcE-EEEeCChhHHHHHHHHhh-hc-CCC----------CeeecCCHhHHHhhcC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKG-FPI-SVYNRTTSKVDETVERAK-QE-GNL----------PLYGFHDPESFVHSIQ 68 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G-~~V-~v~dr~~~~~~~~~~~~~-~~-~~~----------~~~~~~s~~e~~~~l~ 68 (484)
|.||||+|+|.||..+++.|.++. .+| .++|++++....+.+... .. +.+ .+....+++++...
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~-- 79 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEK-- 79 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTT--
T ss_pred CcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccC--
Confidence 459999999999999999998764 454 567888777766654321 00 000 12345678888765
Q ss_pred CCcEEEEecCCCchHHHHHHHHhhhcCCCCEEEec
Q 011501 69 KPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDG 103 (484)
Q Consensus 69 ~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~ 103 (484)
.|+|++|+|...+.+... .+++.|..||..
T Consensus 80 -vDvV~~aTp~~~h~~~a~----~~l~aGk~Vi~s 109 (334)
T 2czc_A 80 -VDIIVDATPGGIGAKNKP----LYEKAGVKAIFQ 109 (334)
T ss_dssp -CSEEEECCSTTHHHHHHH----HHHHHTCEEEEC
T ss_pred -CCEEEECCCccccHHHHH----HHHHcCCceEee
Confidence 999999999985444332 234456666643
No 287
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=97.44 E-value=0.00085 Score=67.01 Aligned_cols=108 Identities=16% Similarity=0.163 Sum_probs=72.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++|+|+|+|++|...|+.|.+.|.+|.++|+++++ .+..+.. +.+.. +.+++... .+|+++-|-....-.
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~-~~~a~~~------ga~~v-~~~ell~~--~~DIliP~A~~~~I~ 245 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTER-VAHAVAL------GHTAV-ALEDVLST--PCDVFAPCAMGGVIT 245 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHT------TCEEC-CGGGGGGC--CCSEEEECSCSCCBC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHhc------CCEEe-ChHHhhcC--ccceecHhHHHhhcC
Confidence 58999999999999999999999999999999876 3333322 13333 55666551 389998653222111
Q ss_pred HHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 84 DQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 84 ~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
.+. ++.+ +.++|++.++...... +..+.+.++|+.++.
T Consensus 246 ~~~----~~~l-k~~iVie~AN~p~t~~-eA~~~L~~~gIlv~P 283 (355)
T 1c1d_A 246 TEV----ARTL-DCSVVAGAANNVIADE-AASDILHARGILYAP 283 (355)
T ss_dssp HHH----HHHC-CCSEECCSCTTCBCSH-HHHHHHHHTTCEECC
T ss_pred HHH----HhhC-CCCEEEECCCCCCCCH-HHHHHHHhCCEEEEC
Confidence 222 2344 3689999998864332 335778888876653
No 288
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.41 E-value=0.00019 Score=71.41 Aligned_cols=125 Identities=14% Similarity=0.106 Sum_probs=73.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC------C--CcE-EEEeCChhHHHH------HHHHhhhcCCCCee-ecC---CHhHH
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEK------G--FPI-SVYNRTTSKVDE------TVERAKQEGNLPLY-GFH---DPESF 63 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~------G--~~V-~v~dr~~~~~~~------~~~~~~~~~~~~~~-~~~---s~~e~ 63 (484)
+.||||||+|.||..++..|.+. | .+| .++|+++++.+. +.+..... .+. .++ +++++
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~~l 82 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKG---SLDSLEYESISASEA 82 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTT---CGGGCCSEECCHHHH
T ss_pred EEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccC---CcccccCCCCCHHHH
Confidence 36899999999999999998764 2 454 577988765432 22211110 121 344 89998
Q ss_pred HhhcCCCcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCC-hHHHHHHHHHHHHcCCeE-EeccCCC
Q 011501 64 VHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEW-YENTERRQKAVAELGLLY-LGMGVSG 132 (484)
Q Consensus 64 ~~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~-~~~~~~~~~~l~~~g~~~-i~~pv~g 132 (484)
+ . ...|+|+.|+|.....+...+.....+..|+-|+.+.... .....++.+..+++|+.| .++.+.+
T Consensus 83 l-~-~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~~~~ea~vg~ 151 (331)
T 3c8m_A 83 L-A-RDFDIVVDATPASADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRRIRYEATVAG 151 (331)
T ss_dssp H-H-SSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSST
T ss_pred h-C-CCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 8 4 3489999999985101112223344566788777654321 123345555566677654 3333433
No 289
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.40 E-value=0.00049 Score=68.19 Aligned_cols=96 Identities=13% Similarity=0.108 Sum_probs=60.1
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCC--CcEEEEeCChhHH--HHHHHHhhhcCCCCeee---cCCHhHHHhhcCCCcEEE
Q 011501 3 QTRIGLAG-LAVMGQNLALNIAEKG--FPISVYNRTTSKV--DETVERAKQEGNLPLYG---FHDPESFVHSIQKPRVII 74 (484)
Q Consensus 3 ~~~IgiIG-lG~mG~~lA~~L~~~G--~~V~v~dr~~~~~--~~~~~~~~~~~~~~~~~---~~s~~e~~~~l~~advIi 74 (484)
+|||+||| +|.+|.+++..|+..| ++|.++|++++.. .++..... ...+.. .+++++.++. +|+||
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~---~~~v~~~~~t~d~~~al~g---aDvVi 81 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDT---GAVVRGFLGQQQLEAALTG---MDLII 81 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCS---SCEEEEEESHHHHHHHHTT---CSEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccc---cceEEEEeCCCCHHHHcCC---CCEEE
Confidence 46999999 8999999999999998 7999999987621 11221100 001222 2244555555 99999
Q ss_pred EecCCCc---------------hHHHHHHHHhhhcCCCCEEEecCC
Q 011501 75 MLVKAGS---------------PVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 75 ~~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st 105 (484)
++.+.+. .++++++.+..+- +..+|+..||
T Consensus 82 ~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~SN 126 (326)
T 1smk_A 82 VPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLISN 126 (326)
T ss_dssp ECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCS
T ss_pred EcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECC
Confidence 9986432 1334445555544 4556666544
No 290
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.39 E-value=0.00051 Score=71.21 Aligned_cols=90 Identities=12% Similarity=0.058 Sum_probs=69.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
++++|+|+|.+|..+|+.|+..|.+|+++|+++.+.......+ + ...+.+++... +|+++.+......+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g-------~-dv~~lee~~~~---aDvVi~atG~~~vl 334 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEG-------L-QVLTLEDVVSE---ADIFVTTTGNKDII 334 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------C-EECCGGGTTTT---CSEEEECSSCSCSB
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhC-------C-ccCCHHHHHHh---cCEEEeCCCChhhh
Confidence 5799999999999999999999999999999998876655433 2 23467777766 99999887654322
Q ss_pred HHHHHHHhhhcCCCCEEEecCCCC
Q 011501 84 DQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 84 ~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
. ......++++.+|++.+...
T Consensus 335 ~---~e~l~~mk~gaiVvNaG~~~ 355 (488)
T 3ond_A 335 M---LDHMKKMKNNAIVCNIGHFD 355 (488)
T ss_dssp C---HHHHTTSCTTEEEEESSSTT
T ss_pred h---HHHHHhcCCCeEEEEcCCCC
Confidence 2 23456688999999998753
No 291
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=97.38 E-value=0.0015 Score=63.52 Aligned_cols=98 Identities=12% Similarity=0.094 Sum_probs=62.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC--cEEEEeCChhHHHHH----HHHhhhcC-CCCeeecCCHhHHHhhcCCCcEEEEe
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDET----VERAKQEG-NLPLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~~----~~~~~~~~-~~~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
|||+|||+|.+|.++|..|+.++. ++.+||+++++++.. ........ ..++....+.+++ +. +|+||++
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~-~~---aDvVvit 76 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLL-KG---SEIIVVT 76 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGG-TT---CSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHh-CC---CCEEEEe
Confidence 699999999999999999988775 799999998765432 22111000 0123444556543 33 9999998
Q ss_pred cCCC----ch-----------HHHHHHHHhhhcCCCCEEEecCCC
Q 011501 77 VKAG----SP-----------VDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 77 vp~~----~~-----------v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
--.+ .. ++++.+++..+. ++.+++..||-
T Consensus 77 AG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~-p~aivlvvsNP 120 (294)
T 2x0j_A 77 AGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVTNP 120 (294)
T ss_dssp CCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECSSS
T ss_pred cCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcC-CceEEEEecCc
Confidence 7322 11 233445555554 56777777774
No 292
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.37 E-value=0.0004 Score=68.41 Aligned_cols=99 Identities=12% Similarity=0.133 Sum_probs=63.8
Q ss_pred CC-CCeEEEEcccHHHHHHHHHHHh-C-CCc-EEEEeCChhH-HHHHHHHhhhcCCCCee-ecCCHhHHHhh--cCCCcE
Q 011501 1 MV-QTRIGLAGLAVMGQNLALNIAE-K-GFP-ISVYNRTTSK-VDETVERAKQEGNLPLY-GFHDPESFVHS--IQKPRV 72 (484)
Q Consensus 1 M~-~~~IgiIGlG~mG~~lA~~L~~-~-G~~-V~v~dr~~~~-~~~~~~~~~~~~~~~~~-~~~s~~e~~~~--l~~adv 72 (484)
|+ +.||||||+|.+|..++..|.+ . +.+ |.++|+++++ ...+.+... +. ...+.+++++. ....|+
T Consensus 1 M~~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g------~~~~~~~~e~ll~~~~~~~iDv 74 (312)
T 1nvm_B 1 MNQKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMG------VTTTYAGVEGLIKLPEFADIDF 74 (312)
T ss_dssp CCSCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTT------CCEESSHHHHHHHSGGGGGEEE
T ss_pred CCCCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcC------CCcccCCHHHHHhccCCCCCcE
Confidence 54 4689999999999999999966 3 444 4578999887 555544321 22 24566777543 134899
Q ss_pred EEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 73 IIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 73 Ii~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
|++++|...+.+. ....+.. .+|..|++.+...
T Consensus 75 V~~atp~~~h~~~-a~~al~a-~~Gk~Vi~ekp~~ 107 (312)
T 1nvm_B 75 VFDATSASAHVQN-EALLRQA-KPGIRLIDLTPAA 107 (312)
T ss_dssp EEECSCHHHHHHH-HHHHHHH-CTTCEEEECSTTC
T ss_pred EEECCChHHHHHH-HHHHHHh-CCCCEEEEcCccc
Confidence 9999996543332 2222221 1388888877543
No 293
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.33 E-value=0.00051 Score=65.98 Aligned_cols=70 Identities=10% Similarity=0.101 Sum_probs=51.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 2 VQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 2 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
|||+|.|.|+|.+|..++..|+++|++|++.+|++++.+.+...+.. . ...|+.++ + ++++|+||-+...
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-----~-~~~D~~d~-~-~~~~d~vi~~a~~ 73 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAE-----P-LLWPGEEP-S-LDGVTHLLISTAP 73 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEE-----E-EESSSSCC-C-CTTCCEEEECCCC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCe-----E-EEeccccc-c-cCCCCEEEECCCc
Confidence 35799999999999999999999999999999999887766543211 1 11233332 1 4558999988754
No 294
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.31 E-value=0.00028 Score=73.43 Aligned_cols=85 Identities=13% Similarity=0.264 Sum_probs=59.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHh--hcCCCcEEEEecCCC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVH--SIQKPRVIIMLVKAG 80 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~--~l~~advIi~~vp~~ 80 (484)
.|||-|+|+|.+|..+|+.|.+.||+|++.|+++++++.+.+...-. -+.+..+-.++.+ .+++||+++.+++++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~---~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~D 79 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLR---VVNGHASHPDVLHEAGAQDADMLVAVTNTD 79 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCE---EEESCTTCHHHHHHHTTTTCSEEEECCSCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcE---EEEEcCCCHHHHHhcCCCcCCEEEEEcCCh
Confidence 47999999999999999999999999999999999998887643110 1223333333333 356799888777654
Q ss_pred chHHHHHHHHh
Q 011501 81 SPVDQTIKTLS 91 (484)
Q Consensus 81 ~~v~~vl~~l~ 91 (484)
.+.-++..++
T Consensus 80 -e~Nl~~~~~A 89 (461)
T 4g65_A 80 -ETNMAACQVA 89 (461)
T ss_dssp -HHHHHHHHHH
T ss_pred -HHHHHHHHHH
Confidence 4443333333
No 295
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=97.31 E-value=0.00041 Score=68.07 Aligned_cols=112 Identities=12% Similarity=0.014 Sum_probs=76.7
Q ss_pred CCeEEEE-cc-cHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCC
Q 011501 3 QTRIGLA-GL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAG 80 (484)
Q Consensus 3 ~~~IgiI-Gl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 80 (484)
..+|+|| |. |.+|...+++|.+.|++ .+|+.||.+.. ++. . ++..+.+++|+.+.. .+|++++++|+.
T Consensus 13 ~~siaVV~Gasg~~G~~~~~~l~~~G~~-~v~~VnP~~~g---~~i--~---G~~vy~sl~el~~~~-~vD~avI~vP~~ 82 (305)
T 2fp4_A 13 KNTKVICQGFTGKQGTFHSQQALEYGTN-LVGGTTPGKGG---KTH--L---GLPVFNTVKEAKEQT-GATASVIYVPPP 82 (305)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTT---CEE--T---TEEEESSHHHHHHHH-CCCEEEECCCHH
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHCCCc-EEEEeCCCcCc---ceE--C---CeeeechHHHhhhcC-CCCEEEEecCHH
Confidence 3568999 98 99999999999999999 55566654311 000 1 477888999998711 299999999987
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCCC-hHHHHHHHHHHHHc-CCeEEe
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNEW-YENTERRQKAVAEL-GLLYLG 127 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~~-~~~~~~~~~~l~~~-g~~~i~ 127 (484)
.+.++++++...= - ..++..+... ..+..++.+.+++. |+.+++
T Consensus 83 -~~~~~~~e~i~~G-i-~~iv~~t~G~~~~~~~~l~~~a~~~~gi~liG 128 (305)
T 2fp4_A 83 -FAAAAINEAIDAE-V-PLVVCITEGIPQQDMVRVKHRLLRQGKTRLIG 128 (305)
T ss_dssp -HHHHHHHHHHHTT-C-SEEEECCCCCCHHHHHHHHHHHTTCSSCEEEC
T ss_pred -HHHHHHHHHHHCC-C-CEEEEECCCCChHHHHHHHHHHHhcCCcEEEe
Confidence 6667776665531 2 3334444443 34455677777888 888765
No 296
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=97.31 E-value=0.0016 Score=64.49 Aligned_cols=113 Identities=15% Similarity=0.095 Sum_probs=68.5
Q ss_pred CCeEEEEcccHHHHH-HHHHHHhCCCcEEEEeCChh--HHHHHHHHhhhcCCCCeeecCCHhHHH-hhcCCCcEEEEe--
Q 011501 3 QTRIGLAGLAVMGQN-LALNIAEKGFPISVYNRTTS--KVDETVERAKQEGNLPLYGFHDPESFV-HSIQKPRVIIML-- 76 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~-lA~~L~~~G~~V~v~dr~~~--~~~~~~~~~~~~~~~~~~~~~s~~e~~-~~l~~advIi~~-- 76 (484)
+++|.|||+|.+|.+ +|+.|.+.|++|+++|+++. ..+.+.+.+. .+..-.+++++. .. +|+||.+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi-----~v~~g~~~~~l~~~~---~d~vV~Spg 75 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGI-----DVYEGFDAAQLDEFK---ADVYVIGNV 75 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTC-----EEEESCCGGGGGSCC---CSEEEECTT
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCC-----EEECCCCHHHcCCCC---CCEEEECCC
Confidence 568999999999995 99999999999999998643 4455554432 122224555544 34 8999985
Q ss_pred cCCCch-HHHHHH---------HHh-hhc-CCCC-EEEecCCCChHHHHHHHHHHHHcCC
Q 011501 77 VKAGSP-VDQTIK---------TLS-VYM-EKGD-CIIDGGNEWYENTERRQKAVAELGL 123 (484)
Q Consensus 77 vp~~~~-v~~vl~---------~l~-~~l-~~g~-iiId~st~~~~~~~~~~~~l~~~g~ 123 (484)
+|.+.. +....+ +++ ..+ +... +-|-.|+++-.++.-+...+...|.
T Consensus 76 i~~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~ 135 (326)
T 3eag_A 76 AKRGMDVVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAGL 135 (326)
T ss_dssp CCTTCHHHHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTTC
T ss_pred cCCCCHHHHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcCC
Confidence 444322 222221 222 222 2223 4445555654445555667777664
No 297
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=97.30 E-value=0.00052 Score=65.76 Aligned_cols=74 Identities=18% Similarity=0.383 Sum_probs=59.8
Q ss_pred CeEEEEcccH-HHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++.|||.|. +|.++|..|.+.|.+|++++++. .++++.+.. +|+||.+++.+..
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t---------------------~~L~~~~~~---ADIVI~Avg~p~~ 206 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT---------------------KDIGSMTRS---SKIVVVAVGRPGF 206 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---------------------SCHHHHHHH---SSEEEECSSCTTC
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc---------------------ccHHHhhcc---CCEEEECCCCCcc
Confidence 5799999985 89999999999999999998642 356677777 9999999988643
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
+. ..++++|.+|||.+...
T Consensus 207 I~------~~~vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 207 LN------REMVTPGSVVIDVGINY 225 (276)
T ss_dssp BC------GGGCCTTCEEEECCCEE
T ss_pred cc------HhhccCCcEEEEeccCc
Confidence 22 24578999999998754
No 298
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.30 E-value=0.00024 Score=66.60 Aligned_cols=73 Identities=8% Similarity=0.136 Sum_probs=50.5
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCC-CcEEEEeCChhHHHHHHHHhhhcCCCCeee----cCCHhHHHhhcCCCcEEE
Q 011501 1 MVQTRIGLAG-LAVMGQNLALNIAEKG-FPISVYNRTTSKVDETVERAKQEGNLPLYG----FHDPESFVHSIQKPRVII 74 (484)
Q Consensus 1 M~~~~IgiIG-lG~mG~~lA~~L~~~G-~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~----~~s~~e~~~~l~~advIi 74 (484)
|+|++|.|.| .|.+|..+++.|++.| ++|.+++|++++.+.+... ++.. ..+.+++.+.++.+|+||
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~-------~~~~~~~Dl~d~~~~~~~~~~~D~vv 93 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPT-------NSQIIMGDVLNHAALKQAMQGQDIVY 93 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCT-------TEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccC-------CcEEEEecCCCHHHHHHHhcCCCEEE
Confidence 4566899998 6999999999999999 8999999998765432211 1111 124444444445589998
Q ss_pred EecCCC
Q 011501 75 MLVKAG 80 (484)
Q Consensus 75 ~~vp~~ 80 (484)
.+....
T Consensus 94 ~~a~~~ 99 (236)
T 3qvo_A 94 ANLTGE 99 (236)
T ss_dssp EECCST
T ss_pred EcCCCC
Confidence 877654
No 299
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.29 E-value=0.00079 Score=66.20 Aligned_cols=118 Identities=14% Similarity=0.127 Sum_probs=77.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCC---hhHHHHHHHHhhhcCCCCeee--cCCH---hHHHhhcCCCcEEE
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRT---TSKVDETVERAKQEGNLPLYG--FHDP---ESFVHSIQKPRVII 74 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~---~~~~~~~~~~~~~~~~~~~~~--~~s~---~e~~~~l~~advIi 74 (484)
+++.|+|+|-+|.+++..|++.|. +|++++|+ .++.+++.++.....+..+.. ..+. .+.+.. +|+||
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~---~DiII 225 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALAS---ADILT 225 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHH---CSEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccC---ceEEE
Confidence 579999999999999999999998 89999999 888877765433210001111 2233 344555 99999
Q ss_pred EecCCCchHHHHHHHH---hhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 75 MLVKAGSPVDQTIKTL---SVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 75 ~~vp~~~~v~~vl~~l---~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
-++|.+..-..- ..+ ...+.++.+|+|.--.+ ..| .+.+..+++|...++
T Consensus 226 NaTp~Gm~~~~~-~~~~~~~~~l~~~~~v~D~vY~P-~~T-~ll~~A~~~G~~~~~ 278 (312)
T 3t4e_A 226 NGTKVGMKPLEN-ESLIGDVSLLRPELLVTECVYNP-HMT-KLLQQAQQAGCKTID 278 (312)
T ss_dssp ECSSTTSTTSTT-CCSCCCGGGSCTTCEEEECCCSS-SSC-HHHHHHHHTTCEEEC
T ss_pred ECCcCCCCCCCC-CcccCCHHHcCCCCEEEEeccCC-CCC-HHHHHHHHCCCeEEC
Confidence 999987310000 011 13467889999987654 333 344555677876554
No 300
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.28 E-value=0.0022 Score=63.59 Aligned_cols=100 Identities=12% Similarity=0.149 Sum_probs=63.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCC-------cEEEEeCC----hhHHHHHHHHhhhc-CCC--CeeecCCHhHHHhhc
Q 011501 3 QTRIGLAGL-AVMGQNLALNIAEKGF-------PISVYNRT----TSKVDETVERAKQE-GNL--PLYGFHDPESFVHSI 67 (484)
Q Consensus 3 ~~~IgiIGl-G~mG~~lA~~L~~~G~-------~V~v~dr~----~~~~~~~~~~~~~~-~~~--~~~~~~s~~e~~~~l 67 (484)
.|||+|+|. |.+|.+++..|+..|+ +|.++|++ +++.+......... ..+ .+...++..+.++.
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~- 83 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKD- 83 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTT-
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCC-
Confidence 469999997 9999999999999885 79999999 55444322111110 000 24445666666665
Q ss_pred CCCcEEEEecCCCc----h-----------HHHHHHHHhhhcCCCCEEEecCC
Q 011501 68 QKPRVIIMLVKAGS----P-----------VDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 68 ~~advIi~~vp~~~----~-----------v~~vl~~l~~~l~~g~iiId~st 105 (484)
+|+||++...+. . +.++++.+..+..+..+||..||
T Consensus 84 --aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 84 --ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp --CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred --CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 999999864331 1 22333455554335567888875
No 301
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.27 E-value=0.00078 Score=62.21 Aligned_cols=72 Identities=14% Similarity=0.273 Sum_probs=49.1
Q ss_pred CCeEEEEc-ccHHHHHHHHHHH-hCCCcEEEEeCChh-HHHHHHHHhhhcCCCCeee----cCCHhHHHhhcCCCcEEEE
Q 011501 3 QTRIGLAG-LAVMGQNLALNIA-EKGFPISVYNRTTS-KVDETVERAKQEGNLPLYG----FHDPESFVHSIQKPRVIIM 75 (484)
Q Consensus 3 ~~~IgiIG-lG~mG~~lA~~L~-~~G~~V~v~dr~~~-~~~~~~~~~~~~~~~~~~~----~~s~~e~~~~l~~advIi~ 75 (484)
|++|.|.| .|.+|..+++.|+ +.|++|.+.+|+++ +.+++..... ++.. ..+.+++.+.++.+|+||.
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~d~~~~~~~~~~~d~vv~ 79 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHE-----RVTVIEGSFQNPGXLEQAVTNAEVVFV 79 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTST-----TEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCC-----ceEEEECCCCCHHHHHHHHcCCCEEEE
Confidence 33499999 5999999999999 89999999999988 7666542211 1211 1233444333445788887
Q ss_pred ecCC
Q 011501 76 LVKA 79 (484)
Q Consensus 76 ~vp~ 79 (484)
+...
T Consensus 80 ~ag~ 83 (221)
T 3r6d_A 80 GAME 83 (221)
T ss_dssp SCCC
T ss_pred cCCC
Confidence 7754
No 302
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.26 E-value=0.00042 Score=65.73 Aligned_cols=108 Identities=13% Similarity=0.057 Sum_probs=72.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
.|+|+++|+|.||..+++. . ++++ .+|+ ++..++ ++..+++++++++. +|+|+.|-+..
T Consensus 12 ~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~---~k~gel----------gv~a~~d~d~lla~---pD~VVe~A~~~- 71 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD---RISKDI----------PGVVRLDEFQVPSD---VSTVVECASPE- 71 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH--S-CCSEEEEEC---SSCCCC----------SSSEECSSCCCCTT---CCEEEECSCHH-
T ss_pred cceEEEECcCHHHHHHHhc--C-CcEEEEEEe---cccccc----------CceeeCCHHHHhhC---CCEEEECCCHH-
Confidence 3799999999999999998 4 8876 5677 332222 24567888888754 99999997443
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCCC---hHHHHHHHHHHHHcCCeE-EeccCCCC
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNEW---YENTERRQKAVAELGLLY-LGMGVSGG 133 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~~---~~~~~~~~~~l~~~g~~~-i~~pv~gg 133 (484)
++++ .+.+.|..|.-++-+|... +...+++.+.+++.|..+ +..+..+|
T Consensus 72 av~e---~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~l~vpSGAi~G 124 (253)
T 1j5p_A 72 AVKE---YSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSPARVFFPSGAIGG 124 (253)
T ss_dssp HHHH---HHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCEEECCCTTCCC
T ss_pred HHHH---HHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCeEEecCCcccc
Confidence 3333 3556677888888887653 222344444445555554 54666666
No 303
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.26 E-value=9.2e-05 Score=68.88 Aligned_cols=79 Identities=24% Similarity=0.356 Sum_probs=51.6
Q ss_pred CeEEEEcccHHHHHHHHH--HHhCCCcEE-EEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCC
Q 011501 4 TRIGLAGLAVMGQNLALN--IAEKGFPIS-VYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAG 80 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~--L~~~G~~V~-v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 80 (484)
.+|+|||+|.+|..++.. +...|+++. ++|.++++...... +.++...++++++++. .|++++|+|+.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~------gv~V~~~~dl~eli~~---~D~ViIAvPs~ 156 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVG------GVPVYNLDDLEQHVKD---ESVAILTVPAV 156 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEET------TEEEEEGGGHHHHCSS---CCEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhc------CCeeechhhHHHHHHh---CCEEEEecCch
Confidence 579999999999999994 445578655 67999987543221 1124456677777765 49999999986
Q ss_pred chHHHHHHHHhh
Q 011501 81 SPVDQTIKTLSV 92 (484)
Q Consensus 81 ~~v~~vl~~l~~ 92 (484)
...++++.+..
T Consensus 157 -~~~ei~~~l~~ 167 (215)
T 2vt3_A 157 -AAQSITDRLVA 167 (215)
T ss_dssp -HHHHHHHHHHH
T ss_pred -hHHHHHHHHHH
Confidence 34455555543
No 304
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.26 E-value=0.00085 Score=65.57 Aligned_cols=112 Identities=15% Similarity=0.050 Sum_probs=75.1
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
.+|.|+|+ |.||..++++|.+.|++ .++..+|.+... .. +++..+.+++++.+....+|++++++|+. .
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~g~~-~v~~VnP~~~g~---~i-----~G~~vy~sl~el~~~~~~~DvaIi~vp~~-~ 83 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEYGTK-VVAGVTPGKGGS---EV-----HGVPVYDSVKEALAEHPEINTSIVFVPAP-F 83 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTC---EE-----TTEEEESSHHHHHHHCTTCCEEEECCCGG-G
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCc-EEEEeCCCCCCc---eE-----CCEeeeCCHHHHhhcCCCCCEEEEecCHH-H
Confidence 46888898 99999999999999998 555555543100 00 14778899999876321289999999987 6
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCCh-HHHHHHHHHHHHcCCeEEe
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEWY-ENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~~-~~~~~~~~~l~~~g~~~i~ 127 (484)
+.+++++....= ...+|+ .++..+ .+..++.+.+++.|+.+++
T Consensus 84 ~~~~v~ea~~~G-i~~vVi-~t~G~~~~~~~~l~~~A~~~gi~viG 127 (297)
T 2yv2_A 84 APDAVYEAVDAG-IRLVVV-ITEGIPVHDTMRFVNYARQKGATIIG 127 (297)
T ss_dssp HHHHHHHHHHTT-CSEEEE-CCCCCCHHHHHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHHHHCC-CCEEEE-ECCCCCHHHHHHHHHHHHHcCCEEEc
Confidence 666776665531 222444 444443 3455677777778887664
No 305
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=97.23 E-value=5.8e-05 Score=74.26 Aligned_cols=91 Identities=14% Similarity=0.096 Sum_probs=62.1
Q ss_pred CeEEEEcccHH-HHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeee-----c--CCHhHHHhhcCCCcEEEE
Q 011501 4 TRIGLAGLAVM-GQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYG-----F--HDPESFVHSIQKPRVIIM 75 (484)
Q Consensus 4 ~~IgiIGlG~m-G~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~-----~--~s~~e~~~~l~~advIi~ 75 (484)
.++.|||.|.| |..+|..|...|.+|+++||+..+........... .... + .++++.+.. +|+||.
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~---~~~~t~~~~t~~~~L~e~l~~---ADIVIs 251 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLN---KHHVEDLGEYSEDLLKKCSLD---SDVVIT 251 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCC---CCEEEEEEECCHHHHHHHHHH---CSEEEE
T ss_pred CEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhh---cccccccccccHhHHHHHhcc---CCEEEE
Confidence 58999999976 99999999999999999999843321111100000 0111 1 456667776 999999
Q ss_pred ecCCCch-HHHHHHHHhhhcCCCCEEEecCCC
Q 011501 76 LVKAGSP-VDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 76 ~vp~~~~-v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
+++.+.. +. ...+++|.+|||.+..
T Consensus 252 Atg~p~~vI~------~e~vk~GavVIDVgi~ 277 (320)
T 1edz_A 252 GVPSENYKFP------TEYIKEGAVCINFACT 277 (320)
T ss_dssp CCCCTTCCBC------TTTSCTTEEEEECSSS
T ss_pred CCCCCcceeC------HHHcCCCeEEEEcCCC
Confidence 9987642 11 1346789999999875
No 306
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.19 E-value=0.00016 Score=69.96 Aligned_cols=96 Identities=15% Similarity=0.217 Sum_probs=57.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHh-CCCcEE-EEeCChhHH--HHHHHH-hhhcCCCCeeecCCHhHHHhhcCCCcEEEEe
Q 011501 3 QTRIGLAGL-AVMGQNLALNIAE-KGFPIS-VYNRTTSKV--DETVER-AKQEGNLPLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 3 ~~~IgiIGl-G~mG~~lA~~L~~-~G~~V~-v~dr~~~~~--~~~~~~-~~~~~~~~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
+|||+|+|+ |.||+.++..+.+ .|+++. ++|+++++. ..+.+. +.. ..++...++++++++. +|+||-+
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~--~~~v~~~~dl~~~l~~---~DvVIDf 79 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAG--KTGVTVQSSLDAVKDD---FDVFIDF 79 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSS--CCSCCEESCSTTTTTS---CSEEEEC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCC--cCCceecCCHHHHhcC---CCEEEEc
Confidence 479999998 9999999998874 577766 789876431 000000 000 0124446677776655 9999955
Q ss_pred cCCCchHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 77 VKAGSPVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 77 vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
+++. ...+.+. ..+..|.-+|-.+|..
T Consensus 80 t~p~-~~~~~~~---~a~~~G~~vVigTtG~ 106 (273)
T 1dih_A 80 TRPE-GTLNHLA---FCRQHGKGMVIGTTGF 106 (273)
T ss_dssp SCHH-HHHHHHH---HHHHTTCEEEECCCCC
T ss_pred CChH-HHHHHHH---HHHhCCCCEEEECCCC
Confidence 5332 3333333 3344566666655544
No 307
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=97.18 E-value=0.00051 Score=57.89 Aligned_cols=103 Identities=11% Similarity=0.045 Sum_probs=75.9
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecC
Q 011501 3 QTRIGLAGL----AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 3 ~~~IgiIGl----G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp 78 (484)
+.+|+|||+ +..|..+.++|.+.||+|+-+|+..+.+. +...+.|+.++-+ .|++++++|
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~------------G~~~y~sl~dlp~----vDlavi~~p 67 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVL------------GKTIINERPVIEG----VDTVTLYIN 67 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEET------------TEECBCSCCCCTT----CCEEEECSC
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCC------------CeeccCChHHCCC----CCEEEEEeC
Confidence 457999997 56899999999999999999887644321 3566777777643 799999999
Q ss_pred CCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 79 AGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 79 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
.. .+.++++++...- ...+|+..+... +++.+.+++.|+++++
T Consensus 68 ~~-~v~~~v~e~~~~g-~k~v~~~~G~~~----~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 68 PQ-NQLSEYNYILSLK-PKRVIFNPGTEN----EELEEILSENGIEPVI 110 (122)
T ss_dssp HH-HHGGGHHHHHHHC-CSEEEECTTCCC----HHHHHHHHHTTCEEEE
T ss_pred HH-HHHHHHHHHHhcC-CCEEEECCCCCh----HHHHHHHHHcCCeEEC
Confidence 86 7777887777643 234666544432 4666777888999885
No 308
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.13 E-value=0.004 Score=60.91 Aligned_cols=98 Identities=9% Similarity=0.081 Sum_probs=59.0
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCC--cEEEEeC--ChhHHHHHHHHhhhc--CCCCeeecCCHhHHHhhcCCCcEEEEe
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGF--PISVYNR--TTSKVDETVERAKQE--GNLPLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~--~V~v~dr--~~~~~~~~~~~~~~~--~~~~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
|||+|+| .|.+|.+++..|+..|+ ++.++|+ ++++++......... ...+++...+..+.++. +|+||++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~---aDvVi~~ 77 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAG---SDVVVIT 77 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTT---CSEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCC---CCEEEEc
Confidence 5899999 99999999999998886 6889999 876654322211110 00012222222444444 9999998
Q ss_pred cCCCc---------------hHHHHHHHHhhhcCCCCEEEecCC
Q 011501 77 VKAGS---------------PVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 77 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st 105 (484)
...+. .++++++.+..+ .+..+|+..||
T Consensus 78 ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SN 120 (303)
T 1o6z_A 78 AGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSN 120 (303)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCC
Confidence 85432 123333444444 45566666544
No 309
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=97.13 E-value=0.00078 Score=65.38 Aligned_cols=76 Identities=16% Similarity=0.287 Sum_probs=58.0
Q ss_pred CeEEEEcccH-HHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++.|||.|. +|.++|..|.+.|.+|+++++....++ +++.+.+ +|+||.+++.+..
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~-------------------l~~~~~~---ADIVI~Avg~p~~ 223 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED-------------------MIDYLRT---ADIVIAAMGQPGY 223 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH-------------------HHHHHHT---CSEEEECSCCTTC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-------------------hhhhhcc---CCEEEECCCCCCC
Confidence 5799999876 899999999999999999997432111 1145565 9999999998643
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
+. ..++++|.+|||.+...
T Consensus 224 I~------~~~vk~GavVIDvgi~~ 242 (300)
T 4a26_A 224 VK------GEWIKEGAAVVDVGTTP 242 (300)
T ss_dssp BC------GGGSCTTCEEEECCCEE
T ss_pred Cc------HHhcCCCcEEEEEeccC
Confidence 22 14578999999998653
No 310
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.12 E-value=0.0009 Score=67.16 Aligned_cols=101 Identities=15% Similarity=0.132 Sum_probs=69.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCC----hhH----HHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEE
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRT----TSK----VDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVI 73 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~----~~~----~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advI 73 (484)
..||.|+|.|.+|..+|+.|...|. +|+++||+ .++ +..+.+......+ ......+++|+++. +|++
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~-~~~~~~~L~eav~~---ADVl 267 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITN-PERLSGDLETALEG---ADFF 267 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSC-TTCCCSCHHHHHTT---CSEE
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhh-ccCchhhHHHHHcc---CCEE
Confidence 3589999999999999999999998 89999998 554 3233332222100 11224578888877 9999
Q ss_pred EEecCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHH
Q 011501 74 IMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENT 111 (484)
Q Consensus 74 i~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~ 111 (484)
|-+..++...++. ...+.++.+|+++|+-.|+.+
T Consensus 268 IG~Sap~l~t~em----Vk~Ma~~pIIfalSNPt~E~~ 301 (388)
T 1vl6_A 268 IGVSRGNILKPEW----IKKMSRKPVIFALANPVPEID 301 (388)
T ss_dssp EECSCSSCSCHHH----HTTSCSSCEEEECCSSSCSSC
T ss_pred EEeCCCCccCHHH----HHhcCCCCEEEEcCCCCCCCC
Confidence 9887644333344 344567889999999766444
No 311
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.09 E-value=0.0011 Score=64.17 Aligned_cols=96 Identities=19% Similarity=0.170 Sum_probs=62.6
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhC-CCcE-EEEeCChhH-----HHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEE
Q 011501 3 QTRIGLAG-LAVMGQNLALNIAEK-GFPI-SVYNRTTSK-----VDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVII 74 (484)
Q Consensus 3 ~~~IgiIG-lG~mG~~lA~~L~~~-G~~V-~v~dr~~~~-----~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi 74 (484)
++||+|+| +|.||+.++..+.+. ++++ .++|+++.. +.++.... ..++..++++++++.. +|+||
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~----~~gv~v~~dl~~ll~~---aDVvI 93 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSD----FLGVRITDDPESAFSN---TEGIL 93 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCS----CCSCBCBSCHHHHTTS---CSEEE
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccC----cCCceeeCCHHHHhcC---CCEEE
Confidence 35899999 999999999998754 6664 466887532 11111000 1246778899998876 99999
Q ss_pred EecCCCchHHHHHHHHhhhcCCCCEEEecCCCChH
Q 011501 75 MLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYE 109 (484)
Q Consensus 75 ~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~ 109 (484)
-.+++. .+.+. +...+..|.-+|.++|....
T Consensus 94 DFT~p~-a~~~~---~~~~l~~Gv~vViGTTG~~~ 124 (288)
T 3ijp_A 94 DFSQPQ-ASVLY---ANYAAQKSLIHIIGTTGFSK 124 (288)
T ss_dssp ECSCHH-HHHHH---HHHHHHHTCEEEECCCCCCH
T ss_pred EcCCHH-HHHHH---HHHHHHcCCCEEEECCCCCH
Confidence 877543 33333 33345567777777777644
No 312
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=97.07 E-value=0.0013 Score=65.29 Aligned_cols=102 Identities=11% Similarity=0.174 Sum_probs=61.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC-CCcEE-EEeC--ChhHHHHHHHHhhhcCCC----------------Ceeec--C
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNR--TTSKVDETVERAKQEGNL----------------PLYGF--H 58 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr--~~~~~~~~~~~~~~~~~~----------------~~~~~--~ 58 (484)
|||.||||+|+|++|..+++.|.++ +.+|. +.|+ +++....+.+....-+.+ .+... .
T Consensus 1 mM~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~ 80 (335)
T 1u8f_O 1 MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQER 80 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred CCceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecC
Confidence 6667999999999999999998875 46655 4564 666665555421100000 01111 2
Q ss_pred CHhHHHhhcCCCcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 59 DPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 59 s~~e~~~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
+++++.-.-..+|+||.|+|.....+. ...+++.|..+|++|.-
T Consensus 81 d~~~l~~~~~~vDvV~eatg~~~~~e~----a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 81 DPSKIKWGDAGAEYVVESTGVFTTMEK----AGAHLQGGAKRVIISAP 124 (335)
T ss_dssp SGGGCCTTTTTCCEEEECSSSCCSHHH----HGGGGGGTCSEEEESSC
T ss_pred CHHHCccccCCCCEEEECCCchhhHHH----HHHHHhCCCeEEEeccC
Confidence 555542000238999999998865432 23456678667777764
No 313
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.07 E-value=0.003 Score=60.03 Aligned_cols=33 Identities=21% Similarity=0.381 Sum_probs=31.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCCh
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTT 36 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~ 36 (484)
++|.|||+|.+|..++.+|++.|. +++++|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 589999999999999999999997 899999987
No 314
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.04 E-value=0.0077 Score=59.12 Aligned_cols=97 Identities=16% Similarity=0.235 Sum_probs=58.8
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhC-C--CcEEEEeCChhHHHHHHHHhhhcCCCC--eeec--CCHhHHHhhcCCCcEEEE
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEK-G--FPISVYNRTTSKVDETVERAKQEGNLP--LYGF--HDPESFVHSIQKPRVIIM 75 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~-G--~~V~v~dr~~~~~~~~~~~~~~~~~~~--~~~~--~s~~e~~~~l~~advIi~ 75 (484)
|||+||| +|.+|.+++..|... + .++.++|+++ +++......... .+. +... ++..+..+. +|+||+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~-~~~~~v~~~~~~~~~~~~~~---aDivii 75 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI-PTAVKIKGFSGEDATPALEG---ADVVLI 75 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS-CSSEEEEEECSSCCHHHHTT---CSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC-CCCceEEEecCCCcHHHhCC---CCEEEE
Confidence 5899999 899999999999875 5 4899999987 222111111110 111 2221 233444455 999999
Q ss_pred ecCCCc----h-----------HHHHHHHHhhhcCCCCEEEecCCC
Q 011501 76 LVKAGS----P-----------VDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 76 ~vp~~~----~-----------v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
+.+.+. . ++++.+.+..+ .++.+++..||-
T Consensus 76 ~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~-~p~a~vlvvtNP 120 (312)
T 3hhp_A 76 SAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKACIGIITNP 120 (312)
T ss_dssp CCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECSSC
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEecCc
Confidence 875432 1 22333455555 366778888763
No 315
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.04 E-value=0.0038 Score=62.11 Aligned_cols=97 Identities=13% Similarity=0.143 Sum_probs=59.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCC-CcE-EEEeCChhHHHHHHHHhhhc--C---------CCCeeecCCHhHHHhhcCCC
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKG-FPI-SVYNRTTSKVDETVERAKQE--G---------NLPLYGFHDPESFVHSIQKP 70 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G-~~V-~v~dr~~~~~~~~~~~~~~~--~---------~~~~~~~~s~~e~~~~l~~a 70 (484)
.||||+|+|.||..+++.|.++. .+| .+.|++++....+.....-. . ..++....+++++.+. +
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~---v 78 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKT---S 78 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHH---C
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcC---C
Confidence 58999999999999999998764 454 46788876655544331000 0 0011122244454445 8
Q ss_pred cEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 71 RVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 71 dvIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
|+||.|+|... ..+.... ++..|..+|+.|...
T Consensus 79 DvV~~aTp~~~-s~~~a~~---~~~aG~kvV~~sa~~ 111 (340)
T 1b7g_O 79 DIVVDTTPNGV-GAQYKPI---YLQLQRNAIFQGGEK 111 (340)
T ss_dssp SEEEECCSTTH-HHHHHHH---HHHTTCEEEECTTSC
T ss_pred CEEEECCCCch-hHHHHHH---HHHcCCeEEEeCCCC
Confidence 99999998873 3333332 344677788877653
No 316
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.04 E-value=0.00026 Score=70.23 Aligned_cols=87 Identities=15% Similarity=0.126 Sum_probs=59.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCC---------CcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCC
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKG---------FPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKP 70 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G---------~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~a 70 (484)
|.+++|||||+|.||..++..|.++. .+| .++|+++++.+.+. ....++|+++++ . .
T Consensus 1 Mk~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~~---------~~~~~~d~~~ll-~---i 67 (332)
T 2ejw_A 1 MEALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAIP---------QELLRAEPFDLL-E---A 67 (332)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSSC---------GGGEESSCCCCT-T---C
T ss_pred CCeeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhccC---------cccccCCHHHHh-C---C
Confidence 55578999999999999999998763 444 57799876532210 013567888877 4 9
Q ss_pred cEEEEecCCCchHHHHHHHHhhhcCCCCEEEec
Q 011501 71 RVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDG 103 (484)
Q Consensus 71 dvIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~ 103 (484)
|+|+.|+|......+.+. ..+..|+-|+..
T Consensus 68 DvVve~t~~~~~a~~~~~---~AL~aGKhVVta 97 (332)
T 2ejw_A 68 DLVVEAMGGVEAPLRLVL---PALEAGIPLITA 97 (332)
T ss_dssp SEEEECCCCSHHHHHHHH---HHHHTTCCEEEC
T ss_pred CEEEECCCCcHHHHHHHH---HHHHcCCeEEEC
Confidence 999999988744343433 344566666654
No 317
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.99 E-value=0.0016 Score=63.20 Aligned_cols=74 Identities=12% Similarity=0.204 Sum_probs=59.2
Q ss_pred CeEEEEcccH-HHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++.|||.|. +|.++|..|...|.+|++++++. .++++.+.. +|+||.+++.+..
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t---------------------~~L~~~~~~---ADIVI~Avg~p~~ 221 (301)
T 1a4i_A 166 RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT---------------------AHLDEEVNK---GDILVVATGQPEM 221 (301)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---------------------SSHHHHHTT---CSEEEECCCCTTC
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc---------------------ccHHHHhcc---CCEEEECCCCccc
Confidence 5899999995 79999999999999999998542 355666666 9999999988742
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
+. ..++++|.+|||.+...
T Consensus 222 I~------~~~vk~GavVIDVgi~~ 240 (301)
T 1a4i_A 222 VK------GEWIKPGAIVIDCGINY 240 (301)
T ss_dssp BC------GGGSCTTCEEEECCCBC
T ss_pred CC------HHHcCCCcEEEEccCCC
Confidence 22 13478999999998864
No 318
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.98 E-value=0.0016 Score=62.66 Aligned_cols=74 Identities=16% Similarity=0.244 Sum_probs=58.6
Q ss_pred CeEEEEcccH-HHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++.|||.|. +|.++|..|...|.+|++++++. .++++.+.. +|+||.+++.+..
T Consensus 162 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t---------------------~~L~~~~~~---ADIVI~Avg~p~~ 217 (285)
T 3l07_A 162 AYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT---------------------TDLKSHTTK---ADILIVAVGKPNF 217 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---------------------SSHHHHHTT---CSEEEECCCCTTC
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHhccc---CCEEEECCCCCCC
Confidence 5799999887 79999999999999999998642 245566666 9999999987643
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
+. ..++++|.+|||.+...
T Consensus 218 I~------~~~vk~GavVIDvgi~~ 236 (285)
T 3l07_A 218 IT------ADMVKEGAVVIDVGINH 236 (285)
T ss_dssp BC------GGGSCTTCEEEECCCEE
T ss_pred CC------HHHcCCCcEEEEecccC
Confidence 22 24578999999998653
No 319
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.98 E-value=0.0015 Score=62.95 Aligned_cols=74 Identities=19% Similarity=0.265 Sum_probs=59.0
Q ss_pred CeEEEEcccH-HHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++.|||.|. +|.++|..|...|.+|++++++. .++++.+.. +|+||.+++.+..
T Consensus 161 k~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t---------------------~~L~~~~~~---ADIVI~Avg~p~~ 216 (285)
T 3p2o_A 161 KDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT---------------------KDLSLYTRQ---ADLIIVAAGCVNL 216 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---------------------SCHHHHHTT---CSEEEECSSCTTC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHHhhc---CCEEEECCCCCCc
Confidence 5799999887 79999999999999999998642 245566666 9999999987643
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
+. ..++++|.+|||.+...
T Consensus 217 I~------~~~vk~GavVIDVgi~~ 235 (285)
T 3p2o_A 217 LR------SDMVKEGVIVVDVGINR 235 (285)
T ss_dssp BC------GGGSCTTEEEEECCCEE
T ss_pred CC------HHHcCCCeEEEEeccCc
Confidence 22 24678999999998653
No 320
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=96.97 E-value=0.035 Score=52.73 Aligned_cols=151 Identities=12% Similarity=0.041 Sum_probs=99.7
Q ss_pred CeeecCCHhHHHhhcCCCcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCC
Q 011501 53 PLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSG 132 (484)
Q Consensus 53 ~~~~~~s~~e~~~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~g 132 (484)
+++.+++..|+++. +|++|+-+|-+...-.+++.+++++++|.+|.++.|.+|...-...+.+.++.+.+.+....+
T Consensus 128 GVkVtsDD~EAvk~---AEi~IlftPfG~~t~~Iakkii~~lpEgAII~nTCTipp~~ly~~le~l~R~DvgIsS~HPaa 204 (358)
T 2b0j_A 128 GLKVTSDDREAVEG---ADIVITWLPKGNKQPDIIKKFADAIPEGAIVTHACTIPTTKFAKIFKDLGREDLNITSYHPGC 204 (358)
T ss_dssp TCEEESCHHHHHTT---CSEEEECCTTCTTHHHHHHHHGGGSCTTCEEEECSSSCHHHHHHHHHHTTCTTSEEEECBCSS
T ss_pred CcEeecchHHHhcC---CCEEEEecCCCCCcHHHHHHHHhhCcCCCEEecccCCCHHHHHHHHHHhCcccCCeeccCCCC
Confidence 57888888899888 999999999998788999999999999999999999998877776666665556655542211
Q ss_pred CHHhhhcCCccccC--CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 011501 133 GEEGARYGPSLMPG--GSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSV 210 (484)
Q Consensus 133 g~~~a~~g~~i~~g--g~~~~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~ 210 (484)
.++. .|.++..- .+++.++++..+.++.+++. |.+-..=.+...-|. ..+.+...+.+.+-+....+.
T Consensus 205 -VPgt-~Gq~~~g~~yAtEEqIeklveLaksa~k~a-------y~vPAdl~SpV~DMg-s~vTAv~~AGiL~Y~~~vtkI 274 (358)
T 2b0j_A 205 -VPEM-KGQVYIAEGYASEEAVNKLYEIGKIARGKA-------FKMPANLIGPVCDMC-SAVTATVYAGLLAYRDAVTKI 274 (358)
T ss_dssp -CTTT-CCCEEEEESSSCHHHHHHHHHHHHHHHSCE-------EEEEHHHHHHHHSTT-HHHHHHHHHHHHHHHHHHHTT
T ss_pred -CCCC-CCccccccccCCHHHHHHHHHHHHHhCCCe-------EecchhhccchhhhH-HHHHHHHHHHHHHHHHHHHHH
Confidence 1111 45433222 38899999999999998763 433211111111111 233344455555666555444
Q ss_pred CCCCHH
Q 011501 211 GKLSNE 216 (484)
Q Consensus 211 g~~~~~ 216 (484)
-|.+.+
T Consensus 275 lgAP~~ 280 (358)
T 2b0j_A 275 LGAPAD 280 (358)
T ss_dssp SCCCHH
T ss_pred hcCcHH
Confidence 435544
No 321
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.97 E-value=0.0015 Score=63.03 Aligned_cols=74 Identities=18% Similarity=0.301 Sum_probs=59.0
Q ss_pred CeEEEEcccH-HHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++.|||.|. +|.++|..|...|.+|++++++. .++++.+.. +|+||.+++.+..
T Consensus 160 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t---------------------~~L~~~~~~---ADIVI~Avg~p~l 215 (288)
T 1b0a_A 160 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT---------------------KNLRHHVEN---ADLLIVAVGKPGF 215 (288)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC---------------------SCHHHHHHH---CSEEEECSCCTTC
T ss_pred CEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHHhcc---CCEEEECCCCcCc
Confidence 5899999996 69999999999999999997543 355666776 9999999997742
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
+. ..++++|.+|||.+...
T Consensus 216 I~------~~~vk~GavVIDVgi~r 234 (288)
T 1b0a_A 216 IP------GDWIKEGAIVIDVGINR 234 (288)
T ss_dssp BC------TTTSCTTCEEEECCCEE
T ss_pred CC------HHHcCCCcEEEEccCCc
Confidence 11 13468999999998753
No 322
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.96 E-value=0.0023 Score=63.50 Aligned_cols=100 Identities=14% Similarity=0.253 Sum_probs=56.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC-CCcEEE-EeC--ChhHHHHHHHHhhhcCCC------------------Ceeec-
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEK-GFPISV-YNR--TTSKVDETVERAKQEGNL------------------PLYGF- 57 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~-G~~V~v-~dr--~~~~~~~~~~~~~~~~~~------------------~~~~~- 57 (484)
||++||||+|+|.+|..+++.|.++ +++|.. .|+ +++....+.+....-|.+ .+...
T Consensus 1 mm~ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~ 80 (337)
T 3e5r_O 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFG 80 (337)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEEC
T ss_pred CCceEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEe
Confidence 5556999999999999999999886 456554 453 445444444211000000 01112
Q ss_pred -CCHhHHH-hhcCCCcEEEEecCCCchHHHHHHHHhhhcCCCC--EEEecCC
Q 011501 58 -HDPESFV-HSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGD--CIIDGGN 105 (484)
Q Consensus 58 -~s~~e~~-~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~--iiId~st 105 (484)
.+++++. .. ..+|+||.|+|.....+. . ..++..|. +||+.+.
T Consensus 81 ~~dp~~l~w~~-~~vDvV~eaTg~~~~~e~-a---~~~l~aGak~VVIs~pa 127 (337)
T 3e5r_O 81 IRNPDEIPWAE-AGAEYVVESTGVFTDKEK-A---AAHLKGGAKKVVISAPS 127 (337)
T ss_dssp CSCGGGCCHHH-HTCSEEEECSSSCCSHHH-H---THHHHTTCSEEEESSCC
T ss_pred cCChHHccccc-cCCCEEEECCCchhhHHH-H---HHHHHcCCCEEEEecCC
Confidence 2555541 10 128999999988755432 2 22344555 8888765
No 323
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=96.95 E-value=0.0015 Score=62.82 Aligned_cols=74 Identities=16% Similarity=0.313 Sum_probs=58.3
Q ss_pred CeEEEEcccHH-HHHHHHHHHhC--CCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCC
Q 011501 4 TRIGLAGLAVM-GQNLALNIAEK--GFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAG 80 (484)
Q Consensus 4 ~~IgiIGlG~m-G~~lA~~L~~~--G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 80 (484)
+++.|||.|.+ |.++|..|.+. |.+|++++++. .++.+.+.+ +|+||.+++.+
T Consensus 159 k~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t---------------------~~L~~~~~~---ADIVI~Avg~p 214 (281)
T 2c2x_A 159 AHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT---------------------RDLPALTRQ---ADIVVAAVGVA 214 (281)
T ss_dssp CEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC---------------------SCHHHHHTT---CSEEEECSCCT
T ss_pred CEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch---------------------hHHHHHHhh---CCEEEECCCCC
Confidence 58999999975 99999999999 88999997653 255556666 99999999887
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
..+. ..++++|.+|||.+...
T Consensus 215 ~~I~------~~~vk~GavVIDVgi~r 235 (281)
T 2c2x_A 215 HLLT------ADMVRPGAAVIDVGVSR 235 (281)
T ss_dssp TCBC------GGGSCTTCEEEECCEEE
T ss_pred cccC------HHHcCCCcEEEEccCCC
Confidence 4221 13478899999998753
No 324
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.93 E-value=0.0059 Score=63.17 Aligned_cols=115 Identities=17% Similarity=0.180 Sum_probs=66.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChh----HHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEe--c
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTS----KVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIML--V 77 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~----~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~--v 77 (484)
++|.|||+|..|.+.|+.|.+.|++|+++|+++. ..+.+.+.+. .+..-..+++.... .+|+||++ +
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi-----~~~~g~~~~~~~~~--~~d~vv~spgi 82 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGI-----KVVCGSHPLELLDE--DFCYMIKNPGI 82 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTC-----EEEESCCCGGGGGS--CEEEEEECTTS
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCC-----EEEECCChHHhhcC--CCCEEEECCcC
Confidence 5899999999999999999999999999998642 3344444332 12222333333331 16888886 4
Q ss_pred CCCchH-HHHHH---------HHhhhcCCCCEE-EecCCCChHHHHHHHHHHHHcCCeE
Q 011501 78 KAGSPV-DQTIK---------TLSVYMEKGDCI-IDGGNEWYENTERRQKAVAELGLLY 125 (484)
Q Consensus 78 p~~~~v-~~vl~---------~l~~~l~~g~ii-Id~st~~~~~~~~~~~~l~~~g~~~ 125 (484)
|.+... ....+ +++..+.+..+| |-.|+++-.++.-+...+...|...
T Consensus 83 ~~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~~~ 141 (451)
T 3lk7_A 83 PYNNPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGGQRG 141 (451)
T ss_dssp CTTSHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTTCCE
T ss_pred CCCChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCCCE
Confidence 443222 21111 222223334444 4445555444455566777777643
No 325
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.90 E-value=0.013 Score=56.98 Aligned_cols=103 Identities=15% Similarity=0.064 Sum_probs=76.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHccCCCCCCcccch
Q 011501 321 VDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDP 400 (484)
Q Consensus 321 ~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~Gcii~s~ll~~i~~~~~~~~~~~~ll~~~ 400 (484)
.+.++.+|.+.|.+.+..+..++|++.+.++. ++|..++.++++.| ..+|++++.....+.+.+.. +
T Consensus 172 ~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~------G~d~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~------~ 238 (303)
T 3g0o_A 172 PGAGSTVKIIHQLLAGVHIAAAAEAMALAARA------GIPLDVMYDVVTHA-AGNSWMFENRMQHVVDGDYT------P 238 (303)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCCHHHHHHHHTTS-TTCCHHHHHHHHHHHTTCCC------C
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHHhc-ccCCHHHHhhhHHHhcCCCC------C
Confidence 36789999999999999999999999987753 49999999999987 45788777654443332211 1
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011501 401 EFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLAYFD 438 (484)
Q Consensus 401 ~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~~~~ 438 (484)
-|. +.....+++.++..|-+.|+|+|.+.++...|.
T Consensus 239 ~~~--~~~~~kD~~~~~~~a~~~g~~~p~~~~~~~~~~ 274 (303)
T 3g0o_A 239 RSA--VDIFVKDLGLVADTAKALRFPLPLASTALNMFT 274 (303)
T ss_dssp SSB--HHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred CCc--hHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 111 112234467899999999999999998887654
No 326
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.89 E-value=0.0024 Score=61.33 Aligned_cols=117 Identities=15% Similarity=0.097 Sum_probs=77.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++.|+|.|-.+++++..|++.|. +|+++||+.++.+++.+...... ......... ..++.+|+||-++|.+..
T Consensus 126 ~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~-~~~~~~~~~----~~~~~~dliiNaTp~Gm~ 200 (269)
T 3tum_A 126 KRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGF-PGLTVSTQF----SGLEDFDLVANASPVGMG 200 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHC-TTCEEESCC----SCSTTCSEEEECSSTTCS
T ss_pred CeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccC-Ccceehhhh----hhhhcccccccCCccccC
Confidence 579999999999999999999996 79999999999888876543210 011111111 223348999999986532
Q ss_pred HHH---HHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 83 VDQ---TIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 83 v~~---vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
-.. +-......+.++.++.|.--.+ ..| .+.+..+++|...++
T Consensus 201 ~~~~~p~~~~~~~~l~~~~~v~D~vY~P-~~T-~ll~~A~~~G~~~~~ 246 (269)
T 3tum_A 201 TRAELPLSAALLATLQPDTLVADVVTSP-EIT-PLLNRARQVGCRIQT 246 (269)
T ss_dssp TTCCCSSCHHHHHTCCTTSEEEECCCSS-SSC-HHHHHHHHHTCEEEC
T ss_pred CCCCCCCChHHHhccCCCcEEEEEccCC-CCC-HHHHHHHHCcCEEEC
Confidence 110 1123345677889999997554 333 345556677876554
No 327
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.89 E-value=0.0021 Score=64.49 Aligned_cols=96 Identities=13% Similarity=0.173 Sum_probs=57.7
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhh-cCC--CCeeecCCHhHHHhhcCCCcEEEEe
Q 011501 2 VQTRIGLAG-LAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQ-EGN--LPLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 2 ~~~~IgiIG-lG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~-~~~--~~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
+++||+|+| .|.+|..+.+.|.++.. ++...+...+.-..+...... .+. ..+... + ++..+. +|+||+|
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~-~-~~~~~~---vDvVf~a 89 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSV-K-DADFST---VDAVFCC 89 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCG-G-GCCGGG---CSEEEEC
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceec-c-hhHhcC---CCEEEEc
Confidence 346899999 89999999999998764 666664433221222211110 000 011111 1 333334 9999999
Q ss_pred cCCCchHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 77 VKAGSPVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 77 vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
+|.+...+ .. ..+ ..|..|||.|+..
T Consensus 90 tp~~~s~~-~a---~~~-~aG~~VId~sa~~ 115 (359)
T 1xyg_A 90 LPHGTTQE-II---KEL-PTALKIVDLSADF 115 (359)
T ss_dssp CCTTTHHH-HH---HTS-CTTCEEEECSSTT
T ss_pred CCchhHHH-HH---HHH-hCCCEEEECCccc
Confidence 99985432 22 234 6789999999865
No 328
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=96.88 E-value=0.0029 Score=62.90 Aligned_cols=97 Identities=15% Similarity=0.171 Sum_probs=60.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhC-CCcE-EEEeCChhHHHHHHHHhh-h-cC----------CCCeeecCCHhHHHhhcCC
Q 011501 4 TRIGLAGLAVMGQNLALNIAEK-GFPI-SVYNRTTSKVDETVERAK-Q-EG----------NLPLYGFHDPESFVHSIQK 69 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~~~~~~~-~-~~----------~~~~~~~~s~~e~~~~l~~ 69 (484)
.||||+|+|.||..+++.|.++ ++++ .+.|+++........... . .+ +.++....+++++...
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~--- 78 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDE--- 78 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHT---
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcC---
Confidence 5899999999999999999875 4565 456887665544433210 0 00 0012222356666655
Q ss_pred CcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 70 PRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 70 advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
+|+||.|+|.... .+..... ++.|..|||.+...
T Consensus 79 vDvV~~atp~~~~-~~~a~~~---l~aG~~VId~sp~~ 112 (337)
T 1cf2_P 79 ADIVIDCTPEGIG-AKNLKMY---KEKGIKAIFQGGEK 112 (337)
T ss_dssp CSEEEECCSTTHH-HHHHHHH---HHHTCCEEECTTSC
T ss_pred CCEEEECCCchhh-HHHHHHH---HHcCCEEEEecCCC
Confidence 9999999998743 3333333 33466688887763
No 329
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.87 E-value=0.0018 Score=58.52 Aligned_cols=72 Identities=17% Similarity=0.295 Sum_probs=49.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeee----cCCHhHHHhhcCCCcEEEE
Q 011501 1 MVQTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYG----FHDPESFVHSIQKPRVIIM 75 (484)
Q Consensus 1 M~~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~----~~s~~e~~~~l~~advIi~ 75 (484)
|+.|+|.|+|. |.+|..+++.|++.|++|++.+|++++...+... ++.. ..+.+++.+.++.+|+||.
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~d~vi~ 73 (206)
T 1hdo_A 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPR-------PAHVVVGDVLQAADVDKTVAGQDAVIV 73 (206)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCC-------CSEEEESCTTSHHHHHHHHTTCSEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCC-------ceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 66578999987 9999999999999999999999998764321000 1111 1234444444445788887
Q ss_pred ecCC
Q 011501 76 LVKA 79 (484)
Q Consensus 76 ~vp~ 79 (484)
+...
T Consensus 74 ~a~~ 77 (206)
T 1hdo_A 74 LLGT 77 (206)
T ss_dssp CCCC
T ss_pred CccC
Confidence 7654
No 330
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.86 E-value=0.001 Score=66.77 Aligned_cols=94 Identities=12% Similarity=0.258 Sum_probs=57.8
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCC-CcEEEEeCChh----HHHHHHHH--------hhhcCCCCeeec-CCHhHHHh-h
Q 011501 3 QTRIGLAG-LAVMGQNLALNIAEKG-FPISVYNRTTS----KVDETVER--------AKQEGNLPLYGF-HDPESFVH-S 66 (484)
Q Consensus 3 ~~~IgiIG-lG~mG~~lA~~L~~~G-~~V~v~dr~~~----~~~~~~~~--------~~~~~~~~~~~~-~s~~e~~~-~ 66 (484)
++||+|+| .|.+|..+.+.|.++. ++|...++++. ..+..... ... .+... .+++++.+ .
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 83 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIK----DMVVIPTDPKHEEFED 83 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHH----TCBCEESCTTSGGGTT
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCce----eeEEEeCCHHHHhcCC
Confidence 36899999 8999999999998875 47766643221 12211000 000 01111 24555544 4
Q ss_pred cCCCcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 67 IQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 67 l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
+|+||+|+|.. ...+....+ +..|..|||.++..
T Consensus 84 ---~DvV~~atp~~-~~~~~a~~~---~~aG~~VId~s~~~ 117 (354)
T 1ys4_A 84 ---VDIVFSALPSD-LAKKFEPEF---AKEGKLIFSNASAY 117 (354)
T ss_dssp ---CCEEEECCCHH-HHHHHHHHH---HHTTCEEEECCSTT
T ss_pred ---CCEEEECCCch-HHHHHHHHH---HHCCCEEEECCchh
Confidence 99999999886 334444443 34688899998763
No 331
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=96.86 E-value=0.0014 Score=65.37 Aligned_cols=98 Identities=10% Similarity=0.199 Sum_probs=57.4
Q ss_pred CC-CCeEEEEc-ccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhhcCC-CCeeecCCHhHHHhhcCCCcEEEEe
Q 011501 1 MV-QTRIGLAG-LAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQEGN-LPLYGFHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 1 M~-~~~IgiIG-lG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~~~~-~~~~~~~s~~e~~~~l~~advIi~~ 76 (484)
|+ ++||+|+| .|.+|..+.+.|.++.. ++....+..+.-..+......-.+ ..+. ..+.++ +..+|+||+|
T Consensus 1 M~~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~-~~~~~~----~~~vDvV~~a 75 (345)
T 2ozp_A 1 MTGKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLK-FVPPEK----LEPADILVLA 75 (345)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCB-CBCGGG----CCCCSEEEEC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCccccc-ccchhH----hcCCCEEEEc
Confidence 54 57999999 79999999999998764 766554433221111110000000 0111 223332 3459999999
Q ss_pred cCCCchHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 77 VKAGSPVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 77 vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
+|... ..+.+.. ++..|..|||.|+..
T Consensus 76 ~g~~~-s~~~a~~---~~~aG~~VId~Sa~~ 102 (345)
T 2ozp_A 76 LPHGV-FAREFDR---YSALAPVLVDLSADF 102 (345)
T ss_dssp CCTTH-HHHTHHH---HHTTCSEEEECSSTT
T ss_pred CCcHH-HHHHHHH---HHHCCCEEEEcCccc
Confidence 99873 3333333 345788999999864
No 332
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.86 E-value=0.016 Score=56.90 Aligned_cols=104 Identities=12% Similarity=0.085 Sum_probs=78.7
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHccCCCCCCcccch
Q 011501 321 VDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDP 400 (484)
Q Consensus 321 ~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~Gcii~s~ll~~i~~~~~~~~~~~~ll~~~ 400 (484)
.+.++.+|+++|.+.++.+..++|++.+.++. ++|..++.++++.+ ..+|++++.....+.+.+-. +
T Consensus 192 ~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~------G~d~~~~~~~~~~~-~~~s~~~~~~~~~~l~~~~~------~ 258 (320)
T 4dll_A 192 HGSGQLTKLANQMIVGITIGAVAEALLFATKG------GADMAKVKEAITGG-FADSRVLQLHGQRMVERDFA------P 258 (320)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------SCCHHHHHHHHTTS-TTCBHHHHTHHHHHHTTCCC------C
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHHcc-cccCHHHHHhhhhhccCCCC------C
Confidence 37889999999999999999999999998753 49999999999988 46788887765554433211 1
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011501 401 EFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLAYFDT 439 (484)
Q Consensus 401 ~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~~~~~ 439 (484)
-|.- .-...+++.++..|-+.|+|+|...++...|..
T Consensus 259 gf~~--~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~ 295 (320)
T 4dll_A 259 RARL--SIQLKDMRNALATAQEIGFDAPITGLFEQLYAE 295 (320)
T ss_dssp SSBH--HHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred cccH--HHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 1211 112345578899999999999999999886654
No 333
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.83 E-value=0.0025 Score=61.37 Aligned_cols=74 Identities=20% Similarity=0.335 Sum_probs=58.8
Q ss_pred CeEEEEcccH-HHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++.|||.|. +|.++|..|...|.+|+++++.. .++++.+.. +|+||.+++.+..
T Consensus 162 k~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T---------------------~~L~~~~~~---ADIVI~Avg~p~~ 217 (286)
T 4a5o_A 162 MDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT---------------------RDLADHVSR---ADLVVVAAGKPGL 217 (286)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC---------------------SCHHHHHHT---CSEEEECCCCTTC
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC---------------------cCHHHHhcc---CCEEEECCCCCCC
Confidence 5799999876 89999999999999999997632 245566676 9999999987643
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
+. ..++++|.+|||.+...
T Consensus 218 I~------~~~vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 218 VK------GEWIKEGAIVIDVGINR 236 (286)
T ss_dssp BC------GGGSCTTCEEEECCSCS
T ss_pred CC------HHHcCCCeEEEEecccc
Confidence 22 24678999999998764
No 334
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=96.81 E-value=0.003 Score=62.58 Aligned_cols=113 Identities=8% Similarity=0.043 Sum_probs=70.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecC-CHhHHHh-hcCCCcEEEEecCCCc
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFH-DPESFVH-SIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~-s~~e~~~-~l~~advIi~~vp~~~ 81 (484)
++|.|+|.|.+|..+++.|.+.|+ |.+.|+++++++ +.+.+.. -+.+.. +.+.+.+ .++++|.++++++++.
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~----~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~ 189 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGAN----FVHGDPTRVSDLEKANVRGARAVIVDLESDS 189 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCE----EEESCTTSHHHHHHTCSTTEEEEEECCSSHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcE----EEEeCCCCHHHHHhcChhhccEEEEcCCccH
Confidence 379999999999999999999999 999999999988 6543221 012222 3333322 2567999999998763
Q ss_pred hHHHHHHHHhhhcCCC-CEEEecCCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 82 PVDQTIKTLSVYMEKG-DCIIDGGNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g-~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
. .-.+-..+..+.+. .++.-..+. ... +.+...|+..+-.|
T Consensus 190 ~-n~~~~~~ar~~~~~~~iiar~~~~--~~~----~~l~~~G~d~vi~~ 231 (336)
T 1lnq_A 190 E-TIHCILGIRKIDESVRIIAEAERY--ENI----EQLRMAGADQVISP 231 (336)
T ss_dssp H-HHHHHHHHHTTCTTSEEEEECSSG--GGH----HHHHHTTCSEEECH
T ss_pred H-HHHHHHHHHHHCCCCeEEEEECCH--HHH----HHHHHcCCCEEECh
Confidence 2 22223333444454 555555443 222 33445676655333
No 335
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=96.80 E-value=0.0007 Score=67.73 Aligned_cols=97 Identities=12% Similarity=0.133 Sum_probs=58.6
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCC-----C-cEEEEe-C-ChhH-HHHHHHHhhhcCCCCeeec-CCHhHHHhhcCC
Q 011501 1 MVQTRIGLAG-LAVMGQNLALNIAEKG-----F-PISVYN-R-TTSK-VDETVERAKQEGNLPLYGF-HDPESFVHSIQK 69 (484)
Q Consensus 1 M~~~~IgiIG-lG~mG~~lA~~L~~~G-----~-~V~v~d-r-~~~~-~~~~~~~~~~~~~~~~~~~-~s~~e~~~~l~~ 69 (484)
|+|+||+|+| .|.+|..+.+.|.+++ + ++..+. + +..+ ........... ..+... .+.++ ...
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~--~~~~~~~~~~~~-~~~--- 80 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPL--AHRVVEPTEAAV-LGG--- 80 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGG--TTCBCEECCHHH-HTT---
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhccccccc--ceeeeccCCHHH-hcC---
Confidence 5567999999 9999999999999987 3 666654 2 2222 21100000000 011111 23333 333
Q ss_pred CcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCCh
Q 011501 70 PRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWY 108 (484)
Q Consensus 70 advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~ 108 (484)
+|+||+|+|... ..+++..+ ..|..+||.|+..-
T Consensus 81 ~DvVf~alg~~~-s~~~~~~~----~~G~~vIDlSa~~R 114 (352)
T 2nqt_A 81 HDAVFLALPHGH-SAVLAQQL----SPETLIIDCGADFR 114 (352)
T ss_dssp CSEEEECCTTSC-CHHHHHHS----CTTSEEEECSSTTT
T ss_pred CCEEEECCCCcc-hHHHHHHH----hCCCEEEEECCCcc
Confidence 999999999874 34444333 56899999998763
No 336
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.80 E-value=0.0034 Score=57.40 Aligned_cols=69 Identities=14% Similarity=0.284 Sum_probs=48.0
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHH-HhhcCCCcEEEEecCC
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESF-VHSIQKPRVIIMLVKA 79 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~-~~~l~~advIi~~vp~ 79 (484)
|||.|+| .|.+|..++..|++.|++|.+.+|++++.+.+. ... .+. ..|+.+. .+.+..+|+||.+...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~-----~~~-~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDI-----NIL-QKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSS-----EEE-ECCGGGCCHHHHTTCSEEEECCCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCC-----eEE-eccccChhhhhhcCCCEEEECCcC
Confidence 5899999 599999999999999999999999998876553 110 111 1122110 0333459999998754
No 337
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=96.77 E-value=0.0015 Score=64.94 Aligned_cols=98 Identities=12% Similarity=0.112 Sum_probs=58.7
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhC-CCcEEEEeCCh---hHHHHHHHHhhhcCCC-CeeecC--CHhHHHhhcCCCcEEE
Q 011501 3 QTRIGLAG-LAVMGQNLALNIAEK-GFPISVYNRTT---SKVDETVERAKQEGNL-PLYGFH--DPESFVHSIQKPRVII 74 (484)
Q Consensus 3 ~~~IgiIG-lG~mG~~lA~~L~~~-G~~V~v~dr~~---~~~~~~~~~~~~~~~~-~~~~~~--s~~e~~~~l~~advIi 74 (484)
|+||+|+| .|.+|..+.+.|.++ .+++.....+. ..-+.+.+....-.+. ...... +.+++.+. +|+||
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~---~Dvvf 80 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPG---VDVVF 80 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTT---CSEEE
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcC---CCEEE
Confidence 46999999 699999999999985 45766553322 2111122111100000 122222 34444344 99999
Q ss_pred EecCCCchHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 75 MLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 75 ~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
+|+|.+ ...+....+ +..|..|||.|+..
T Consensus 81 ~a~p~~-~s~~~~~~~---~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 81 LATAHE-VSHDLAPQF---LEAGCVVFDLSGAF 109 (337)
T ss_dssp ECSCHH-HHHHHHHHH---HHTTCEEEECSSTT
T ss_pred ECCChH-HHHHHHHHH---HHCCCEEEEcCCcc
Confidence 999986 334444444 45789999999875
No 338
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.76 E-value=0.00045 Score=63.90 Aligned_cols=81 Identities=17% Similarity=0.289 Sum_probs=55.3
Q ss_pred CeEEEEcccHHHHHHHHHH--HhCCCcE-EEEeCChh-HHHH-HHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecC
Q 011501 4 TRIGLAGLAVMGQNLALNI--AEKGFPI-SVYNRTTS-KVDE-TVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L--~~~G~~V-~v~dr~~~-~~~~-~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp 78 (484)
.+++|||+|.+|..++..+ .+.|+++ .++|.+++ +... ... +.++...++++++++. .+.|++++|+|
T Consensus 85 ~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~------GvpV~~~~dL~~~v~~-~~Id~vIIAvP 157 (212)
T 3keo_A 85 TNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTED------GIPVYGISTINDHLID-SDIETAILTVP 157 (212)
T ss_dssp EEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTT------CCBEEEGGGHHHHC-C-CSCCEEEECSC
T ss_pred CEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeEC------CeEEeCHHHHHHHHHH-cCCCEEEEecC
Confidence 4799999999999999874 3457765 46799988 6432 111 2234455667777664 24899999999
Q ss_pred CCchHHHHHHHHhh
Q 011501 79 AGSPVDQTIKTLSV 92 (484)
Q Consensus 79 ~~~~v~~vl~~l~~ 92 (484)
.. ..+++.+.+..
T Consensus 158 s~-~aq~v~d~lv~ 170 (212)
T 3keo_A 158 ST-EAQEVADILVK 170 (212)
T ss_dssp GG-GHHHHHHHHHH
T ss_pred ch-hHHHHHHHHHH
Confidence 86 45666666554
No 339
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.75 E-value=0.022 Score=53.83 Aligned_cols=98 Identities=13% Similarity=0.191 Sum_probs=59.1
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhC-CCcEE-EEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCC
Q 011501 4 TRIGLAGL-AVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAG 80 (484)
Q Consensus 4 ~~IgiIGl-G~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 80 (484)
|||+|+|+ |.||+.++..+.+. ++++. ++|++. +++++.. ..+|+||-+.++.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~----------------------dl~~~~~--~~~DvvIDfT~p~ 56 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGD----------------------PLSLLTD--GNTEVVIDFTHPD 56 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTC----------------------CTHHHHH--TTCCEEEECSCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCC----------------------CHHHHhc--cCCcEEEEccChH
Confidence 48999996 99999999998865 88876 566541 2334333 1289999676554
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCCChHH-HHHHHHHHHHc-CCeEEecc
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNEWYEN-TERRQKAVAEL-GLLYLGMG 129 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~-~~~~~~~l~~~-g~~~i~~p 129 (484)
.+.+.+... +..|.-+|-++|..... ..++.+..++. ++.++-+|
T Consensus 57 -a~~~~~~~a---~~~g~~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~ 103 (245)
T 1p9l_A 57 -VVMGNLEFL---IDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAP 103 (245)
T ss_dssp -THHHHHHHH---HHTTCEEEECCCCCCHHHHHHHHHHHHTSTTCEEEECS
T ss_pred -HHHHHHHHH---HHcCCCEEEcCCCCCHHHHHHHHHHHHhCCCCCEEEEC
Confidence 455444433 34566566666654333 33333333323 66555555
No 340
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.73 E-value=0.0031 Score=58.78 Aligned_cols=71 Identities=17% Similarity=0.243 Sum_probs=51.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhh-hcCCCCeeecCCH-hHHHhhcCCCcEEEEecCC
Q 011501 3 QTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK-QEGNLPLYGFHDP-ESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 3 ~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~-~~~~~~~~~~~s~-~e~~~~l~~advIi~~vp~ 79 (484)
.|+|.|.|. |.+|..+++.|++.|++|.+.+|++++.+.+...+. . + ...|+ +++.+.+.++|+||.+...
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~-----~-~~~Dl~~~~~~~~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASD-----I-VVANLEEDFSHAFASIDAVVFAAGS 94 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSE-----E-EECCTTSCCGGGGTTCSEEEECCCC
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCce-----E-EEcccHHHHHHHHcCCCEEEECCCC
Confidence 468999987 999999999999999999999999998877654321 1 1 11111 3333334458888887754
No 341
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=96.73 E-value=0.011 Score=57.09 Aligned_cols=104 Identities=13% Similarity=0.138 Sum_probs=78.7
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHccCCCCCCcccch
Q 011501 321 VDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDP 400 (484)
Q Consensus 321 ~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~Gcii~s~ll~~i~~~~~~~~~~~~ll~~~ 400 (484)
.+.++.+|.++|.+.++.+..++|++.+.++. ++|..++.++++.| ...|++++...+.+.+.+....
T Consensus 164 ~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~------G~d~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~----- 231 (287)
T 3pef_A 164 VGKGAEMKLVVNMVMGGMMACFCEGLALGEKA------GLATDAILDVIGAG-AMANPMFALKGGLIRDRNFAPA----- 231 (287)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCCHHHHHHHHHHS-TTCCHHHHHHHHHHHTTCCCCS-----
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHHhc-ccccHHHHHHhhhhhcCCCCCC-----
Confidence 46788999999999999999999999998753 49999999999887 4578887776555544321111
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011501 401 EFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLAYFDT 439 (484)
Q Consensus 401 ~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~~~~~ 439 (484)
|. +.....+++.++..|-+.|+|+|.+.++...|..
T Consensus 232 -~~--~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~ 267 (287)
T 3pef_A 232 -FP--LKHMQKDLRLAVALGDRVGQPLVASAAANELFKG 267 (287)
T ss_dssp -SB--HHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred -Cc--hHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 21 1123345789999999999999999988876643
No 342
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.70 E-value=0.0069 Score=60.26 Aligned_cols=97 Identities=9% Similarity=0.063 Sum_probs=58.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC-CCcEE-EEeCChhHHHHHHHHh--hhcCC------------CCeeecCCHhHHHhh
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERA--KQEGN------------LPLYGFHDPESFVHS 66 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~~~~~~--~~~~~------------~~~~~~~s~~e~~~~ 66 (484)
|.||||+|+|.+|+.+++.|.++ +++|. +.|++++....+.+.. ...+. -.+....+++++...
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~ 81 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIED 81 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGG
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccC
Confidence 35999999999999999999887 46654 5576666554444321 00000 012222234444444
Q ss_pred cCCCcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCC
Q 011501 67 IQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 67 l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st 105 (484)
+|+|+.|+|.+.. ..... ..+++.|..||+.+.
T Consensus 82 ---vDiV~eatg~~~s-~~~a~--~~~l~aG~~VI~sap 114 (343)
T 2yyy_A 82 ---ADIVVDGAPKKIG-KQNLE--NIYKPHKVKAILQGG 114 (343)
T ss_dssp ---CSEEEECCCTTHH-HHHHH--HTTTTTTCEEEECTT
T ss_pred ---CCEEEECCCcccc-HHHHH--HHHHHCCCEEEECCC
Confidence 8999999887632 22222 356777888877443
No 343
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.70 E-value=0.00031 Score=65.10 Aligned_cols=79 Identities=14% Similarity=0.167 Sum_probs=53.8
Q ss_pred CeEEEEcccHHHHHHHHHHHh-CCCcE-EEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 4 TRIGLAGLAVMGQNLALNIAE-KGFPI-SVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~-~G~~V-~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
.+|+|||+|.+|..++..+.. .|+++ .++|.++++...... +.++...++++++++. +.|.|++|+|..
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~g~~iVg~~D~dp~k~g~~i~------gv~V~~~~dl~ell~~--~ID~ViIA~Ps~- 151 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGESFELRGFFDVDPEKVGRPVR------GGVIEHVDLLPQRVPG--RIEIALLTVPRE- 151 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEET------TEEEEEGGGHHHHSTT--TCCEEEECSCHH-
T ss_pred CEEEEECccHHHHHHHHhHhhcCCcEEEEEEeCCHHHHhhhhc------CCeeecHHhHHHHHHc--CCCEEEEeCCch-
Confidence 479999999999999985322 26764 567999887543221 1124456677887764 489999999986
Q ss_pred hHHHHHHHHh
Q 011501 82 PVDQTIKTLS 91 (484)
Q Consensus 82 ~v~~vl~~l~ 91 (484)
...++.+.+.
T Consensus 152 ~~~ei~~~l~ 161 (211)
T 2dt5_A 152 AAQKAADLLV 161 (211)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 3345555444
No 344
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=96.67 E-value=0.015 Score=57.88 Aligned_cols=101 Identities=12% Similarity=0.108 Sum_probs=62.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCC-------cEEEEeCChhH--HHHHHHHhhhc-CCC--CeeecCCHhHHHhhcC
Q 011501 2 VQTRIGLAGL-AVMGQNLALNIAEKGF-------PISVYNRTTSK--VDETVERAKQE-GNL--PLYGFHDPESFVHSIQ 68 (484)
Q Consensus 2 ~~~~IgiIGl-G~mG~~lA~~L~~~G~-------~V~v~dr~~~~--~~~~~~~~~~~-~~~--~~~~~~s~~e~~~~l~ 68 (484)
+..||+|+|+ |.+|.+++..|+.... ++.+||.++.. ++-.......- ... ++...+++.+.++.
T Consensus 23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~-- 100 (345)
T 4h7p_A 23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDG-- 100 (345)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTTT--
T ss_pred CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhCC--
Confidence 3448999996 9999999999997643 69999998642 22211111110 000 24556677776666
Q ss_pred CCcEEEEecCCC----ch-----------HHHHHHHHhhhcCCCCEEEecCC
Q 011501 69 KPRVIIMLVKAG----SP-----------VDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 69 ~advIi~~vp~~----~~-----------v~~vl~~l~~~l~~g~iiId~st 105 (484)
+|+||++--.+ .. ++++.+.+..+..++.+|+-.||
T Consensus 101 -advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsN 151 (345)
T 4h7p_A 101 -VAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGN 151 (345)
T ss_dssp -CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred -CCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCC
Confidence 99999975322 11 22333455555556777777776
No 345
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.65 E-value=0.0068 Score=55.65 Aligned_cols=69 Identities=10% Similarity=0.233 Sum_probs=47.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeee-cCCHhHH-HhhcCCCcEEEEecCC
Q 011501 4 TRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYG-FHDPESF-VHSIQKPRVIIMLVKA 79 (484)
Q Consensus 4 ~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~-~~s~~e~-~~~l~~advIi~~vp~ 79 (484)
|||.|.|. |.+|..++..|++.|++|.+.+|++++.+.+.... +.. ..|+.+. .+.++.+|+||.+...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-------~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGAT-------VATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTT-------SEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCC-------ceEEecccccccHhhcccCCEEEECCcc
Confidence 47999987 99999999999999999999999998876553211 111 1122110 0233448998888744
No 346
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=96.59 E-value=0.007 Score=58.77 Aligned_cols=127 Identities=15% Similarity=0.199 Sum_probs=70.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
.+|.|||+|..|..++.+|++.|. +++++|.+.=....+....-.....+..-.....+.+..+ .+++-+...+..-.
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~i-NP~v~v~~~~~~l~ 115 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNI-NPDVLFEVHNYNIT 115 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHH-CTTSEEEEECCCTT
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhh-CCCcEEEEecccCC
Confidence 589999999999999999999997 7999998763333333211000000001111222222222 26676766654321
Q ss_pred HHHHHHHHhh-----hc---CCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCC
Q 011501 83 VDQTIKTLSV-----YM---EKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSG 132 (484)
Q Consensus 83 v~~vl~~l~~-----~l---~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~g 132 (484)
..+.++.+.. .+ ..-++|||++-.. ..-..+.+.+.+.++.++.+++++
T Consensus 116 ~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~-~~R~~in~~c~~~~~Pli~~gv~~ 172 (292)
T 3h8v_A 116 TVENFQHFMDRISNGGLEEGKPVDLVLSCVDNF-EARMTINTACNELGQTWMESGVSE 172 (292)
T ss_dssp SHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSH-HHHHHHHHHHHHHTCCEEEEEECT
T ss_pred cHHHHHHHhhhhcccccccCCCCCEEEECCcch-hhhhHHHHHHHHhCCCEEEeeeec
Confidence 1122233221 11 3568999998664 333445666777899999888775
No 347
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.52 E-value=0.0036 Score=57.72 Aligned_cols=71 Identities=18% Similarity=0.240 Sum_probs=49.3
Q ss_pred CC-CCeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeee----cCCHhHHHhhcCCCcEEE
Q 011501 1 MV-QTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYG----FHDPESFVHSIQKPRVII 74 (484)
Q Consensus 1 M~-~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~----~~s~~e~~~~l~~advIi 74 (484)
|+ ||+|.|.| .|.+|..++..|++.|++|++.+|++++.+.+.. ++.. ..+.+++.+.++++|+||
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~Dl~d~~~~~~~~~~~d~vi 72 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENE--------HLKVKKADVSSLDEVCEVCKGADAVI 72 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCT--------TEEEECCCTTCHHHHHHHHTTCSEEE
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccC--------ceEEEEecCCCHHHHHHHhcCCCEEE
Confidence 54 57899998 5999999999999999999999999876433211 1111 124444444445589988
Q ss_pred EecCC
Q 011501 75 MLVKA 79 (484)
Q Consensus 75 ~~vp~ 79 (484)
.+...
T Consensus 73 ~~a~~ 77 (227)
T 3dhn_A 73 SAFNP 77 (227)
T ss_dssp ECCCC
T ss_pred EeCcC
Confidence 88744
No 348
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.50 E-value=0.0084 Score=58.07 Aligned_cols=75 Identities=19% Similarity=0.246 Sum_probs=49.0
Q ss_pred CC-CCeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCC-----hhHHHHHHHHhhhcCCCCeee----cCCHhHHHhhcCC
Q 011501 1 MV-QTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRT-----TSKVDETVERAKQEGNLPLYG----FHDPESFVHSIQK 69 (484)
Q Consensus 1 M~-~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~-----~~~~~~~~~~~~~~~~~~~~~----~~s~~e~~~~l~~ 69 (484)
|+ +|+|.|+| .|.+|..++..|++.|++|.+.+|+ +++.+.+..... . ++.. ..+++++.+.++.
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~-~---~~~~~~~D~~d~~~l~~~~~~ 76 (313)
T 1qyd_A 1 MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ-L---GAKLIEASLDDHQRLVDALKQ 76 (313)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHT-T---TCEEECCCSSCHHHHHHHHTT
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHh-C---CeEEEeCCCCCHHHHHHHHhC
Confidence 65 67899998 5999999999999999999999998 444443322111 1 1211 1244444444455
Q ss_pred CcEEEEecCC
Q 011501 70 PRVIIMLVKA 79 (484)
Q Consensus 70 advIi~~vp~ 79 (484)
+|+||.+...
T Consensus 77 ~d~vi~~a~~ 86 (313)
T 1qyd_A 77 VDVVISALAG 86 (313)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCcc
Confidence 7888777654
No 349
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.47 E-value=0.028 Score=54.08 Aligned_cols=104 Identities=17% Similarity=0.181 Sum_probs=78.0
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHccCCCCCCcccch
Q 011501 321 VDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDP 400 (484)
Q Consensus 321 ~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~Gcii~s~ll~~i~~~~~~~~~~~~ll~~~ 400 (484)
.+.++.+|.++|.+.+..+..++|++.+.++. ++|..++.++.+.| ...|++++.....+.+.+...
T Consensus 164 ~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~------G~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~------ 230 (287)
T 3pdu_A 164 VGQGARMKLVVNMIMGQMMTALGEGMALGRNC------GLDGGQLLEVLDAG-AMANPMFKGKGQMLLSGEFPT------ 230 (287)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCCHHHHHHHHHHS-TTCCHHHHHHHHHHHHTCCCC------
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHHhc-cccChHHHhhccccccCCCCC------
Confidence 46889999999999999999999999988753 49999999999877 357787776655544432111
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011501 401 EFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLAYFDT 439 (484)
Q Consensus 401 ~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~~~~~ 439 (484)
-|. +.....+++.++..|-+.|+|+|...++...|..
T Consensus 231 ~~~--~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~ 267 (287)
T 3pdu_A 231 SFP--LKHMQKDLRLAVELGDRLGQPLHGAATANESFKR 267 (287)
T ss_dssp SSB--HHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred CCc--HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 121 1223345789999999999999999988876553
No 350
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.46 E-value=0.017 Score=53.68 Aligned_cols=78 Identities=14% Similarity=0.159 Sum_probs=52.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChh-HHHHHHHHhhhcCCCCeeecC-CHhHHHhhcCCCcEEEEecCCCc
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTS-KVDETVERAKQEGNLPLYGFH-DPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~-~~~~~~~~~~~~~~~~~~~~~-s~~e~~~~l~~advIi~~vp~~~ 81 (484)
++|-|||.|.+|..-+..|.+.|.+|++++++.. .++.+.+.+ ++.... ...+ +.+..+|+||.++.++
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~------~i~~i~~~~~~--~dL~~adLVIaAT~d~- 102 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKG------QLRVKRKKVGE--EDLLNVFFIVVATNDQ- 102 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTT------SCEEECSCCCG--GGSSSCSEEEECCCCT-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcC------CcEEEECCCCH--hHhCCCCEEEECCCCH-
Confidence 5899999999999999999999999999987654 344444432 122221 1111 1234499999887665
Q ss_pred hHHHHHHHH
Q 011501 82 PVDQTIKTL 90 (484)
Q Consensus 82 ~v~~vl~~l 90 (484)
.+...+...
T Consensus 103 ~~N~~I~~~ 111 (223)
T 3dfz_A 103 AVNKFVKQH 111 (223)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555443
No 351
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.43 E-value=0.0079 Score=59.46 Aligned_cols=36 Identities=22% Similarity=0.274 Sum_probs=31.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCcEEEEeCCh
Q 011501 1 MVQTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTT 36 (484)
Q Consensus 1 M~~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~ 36 (484)
|++++|.|.|. |.+|..++..|++.|++|++.+|++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34468999997 9999999999999999999999976
No 352
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.41 E-value=0.008 Score=58.10 Aligned_cols=36 Identities=28% Similarity=0.408 Sum_probs=32.0
Q ss_pred CC-CCeEEEEcc-cHHHHHHHHHHHhCCCcEEEEeCCh
Q 011501 1 MV-QTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTT 36 (484)
Q Consensus 1 M~-~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~ 36 (484)
|+ +++|.|+|. |.+|..++..|++.|++|.+.+|++
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 1 MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 65 678999996 9999999999999999999999974
No 353
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.39 E-value=0.021 Score=54.10 Aligned_cols=123 Identities=11% Similarity=0.215 Sum_probs=64.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhh-hcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAK-QEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~-~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
.+|.|||+|.+|..++.+|++.|. +++++|.+.-....+..+.. .....+-.-.....+.+..+ .+++-+...+..-
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~~~v~~~~~~~ 107 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQL-NPDIQLTALQQRL 107 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHH-CTTSEEEEECSCC
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHH-CCCCEEEEEeccC
Confidence 589999999999999999999997 78899877422111111100 00000000001111111111 1444444444321
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCC
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSG 132 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~g 132 (484)
. .+-+.++.. .-++||+++.. +..-..+.+.+.+.++.++.+.+.|
T Consensus 108 ~-~~~~~~~~~---~~DvVi~~~d~-~~~r~~l~~~~~~~~~p~i~~~~~g 153 (251)
T 1zud_1 108 T-GEALKDAVA---RADVVLDCTDN-MATRQEINAACVALNTPLITASAVG 153 (251)
T ss_dssp C-HHHHHHHHH---HCSEEEECCSS-HHHHHHHHHHHHHTTCCEEEEEEEB
T ss_pred C-HHHHHHHHh---cCCEEEECCCC-HHHHHHHHHHHHHhCCCEEEEeccc
Confidence 1 112223322 34789988764 3444445566666788888765443
No 354
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=96.30 E-value=0.0042 Score=64.65 Aligned_cols=71 Identities=11% Similarity=0.156 Sum_probs=47.4
Q ss_pred CeEEEEcccHHHHHH--HHHHHh------CCCcEEEEeCChhHHHHHHH---Hhh-hcC-CCCeeecCCHhHHHhhcCCC
Q 011501 4 TRIGLAGLAVMGQNL--ALNIAE------KGFPISVYNRTTSKVDETVE---RAK-QEG-NLPLYGFHDPESFVHSIQKP 70 (484)
Q Consensus 4 ~~IgiIGlG~mG~~l--A~~L~~------~G~~V~v~dr~~~~~~~~~~---~~~-~~~-~~~~~~~~s~~e~~~~l~~a 70 (484)
|||+|||.|..|.+. ...++. .+.+|..+|+++++++.... ... ..+ ..++..+++.+++++. |
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eAl~g---A 77 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEELNSPVKVVKTESLDEAIEG---A 77 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHTT---C
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHhCC---C
Confidence 589999999987553 223332 13479999999987654221 111 110 2246778899998887 9
Q ss_pred cEEEEec
Q 011501 71 RVIIMLV 77 (484)
Q Consensus 71 dvIi~~v 77 (484)
|+||+++
T Consensus 78 D~Vi~~~ 84 (477)
T 3u95_A 78 DFIINTA 84 (477)
T ss_dssp SEEEECC
T ss_pred CEEEECc
Confidence 9999986
No 355
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.25 E-value=0.013 Score=53.63 Aligned_cols=70 Identities=17% Similarity=0.251 Sum_probs=50.0
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeee--cCC-HhHHHhhcCCCcEEEEecCC
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYG--FHD-PESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~--~~s-~~e~~~~l~~advIi~~vp~ 79 (484)
|+|.|.| .|.+|..++..|++.|++|.+.+|++++.+.+ ... .+.. ..+ .+++.+.++++|+||.+...
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~-----~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~ 73 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNV-----KAVHFDVDWTPEEMAKQLHGMDAIINVSGS 73 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTE-----EEEECCTTSCHHHHHTTTTTCSEEEECCCC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCc-----eEEEecccCCHHHHHHHHcCCCEEEECCcC
Confidence 4899998 79999999999999999999999998764432 000 0111 123 55555556668999888754
Q ss_pred C
Q 011501 80 G 80 (484)
Q Consensus 80 ~ 80 (484)
.
T Consensus 74 ~ 74 (219)
T 3dqp_A 74 G 74 (219)
T ss_dssp T
T ss_pred C
Confidence 3
No 356
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=96.24 E-value=0.0071 Score=60.38 Aligned_cols=98 Identities=11% Similarity=0.159 Sum_probs=56.1
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCC-CcEEEEe-CChhHHHHHHHHhhhc-------CCCCeeecC-CHhHHHhhcCCC
Q 011501 2 VQTRIGLAG-LAVMGQNLALNIAEKG-FPISVYN-RTTSKVDETVERAKQE-------GNLPLYGFH-DPESFVHSIQKP 70 (484)
Q Consensus 2 ~~~~IgiIG-lG~mG~~lA~~L~~~G-~~V~v~d-r~~~~~~~~~~~~~~~-------~~~~~~~~~-s~~e~~~~l~~a 70 (484)
+++||||+| .|.+|..+.+.|.++. +++.... .+....+.+....... ++..+...+ +++++ + .+
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~---~v 78 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYEDH-K---DV 78 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGGG-T---TC
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHHh-c---CC
Confidence 357999999 8999999999998764 3666553 2222111121110000 000122221 34443 3 39
Q ss_pred cEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 71 RVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 71 dvIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
|+||+|+|... ..+....+ +..|..|||.|+..
T Consensus 79 DvVf~atp~~~-s~~~a~~~---~~aG~~VId~s~~~ 111 (350)
T 2ep5_A 79 DVVLSALPNEL-AESIELEL---VKNGKIVVSNASPF 111 (350)
T ss_dssp SEEEECCCHHH-HHHHHHHH---HHTTCEEEECSSTT
T ss_pred CEEEECCChHH-HHHHHHHH---HHCCCEEEECCccc
Confidence 99999998763 33333333 44678899998753
No 357
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=96.16 E-value=0.032 Score=53.73 Aligned_cols=34 Identities=21% Similarity=0.361 Sum_probs=31.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCcEEEEeCCh
Q 011501 3 QTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTT 36 (484)
Q Consensus 3 ~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~ 36 (484)
+++|.|.|. |.+|..++..|++.|++|.+.+|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCC
Confidence 468999985 9999999999999999999999987
No 358
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=96.16 E-value=0.046 Score=55.80 Aligned_cols=74 Identities=15% Similarity=0.169 Sum_probs=47.3
Q ss_pred CCeEEEEcccHH-HHHHHHHHHh--C---CCcEEEEeCChhHHHHHHHH---hhhcCCCCeeecCCHhHHHhhcCCCcEE
Q 011501 3 QTRIGLAGLAVM-GQNLALNIAE--K---GFPISVYNRTTSKVDETVER---AKQEGNLPLYGFHDPESFVHSIQKPRVI 73 (484)
Q Consensus 3 ~~~IgiIGlG~m-G~~lA~~L~~--~---G~~V~v~dr~~~~~~~~~~~---~~~~~~~~~~~~~s~~e~~~~l~~advI 73 (484)
++||+|||.|.. +..+...|+. . +.+|.+||+++++++..... .... ..+++.+++..+.++. ||+|
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~~~~~~~~~-~~~v~~t~d~~~al~~---AD~V 77 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKD-RFKVLISDTFEGAVVD---AKYV 77 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTT-SSEEEECSSHHHHHTT---CSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHHHHHHHhhC-CeEEEEeCCHHHHhCC---CCEE
Confidence 469999999984 2222234454 3 56899999999886643221 1110 0135556677676676 9999
Q ss_pred EEecCCC
Q 011501 74 IMLVKAG 80 (484)
Q Consensus 74 i~~vp~~ 80 (484)
|++.-.+
T Consensus 78 iitagvg 84 (417)
T 1up7_A 78 IFQFRPG 84 (417)
T ss_dssp EECCCTT
T ss_pred EEcCCCC
Confidence 9998543
No 359
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=96.13 E-value=0.035 Score=56.40 Aligned_cols=114 Identities=14% Similarity=0.183 Sum_probs=75.7
Q ss_pred CeEEEEcccHHHHHHHHHHHh-CCCcEE-EEeC----------ChhHHHHHHHHhhhcCCC-CeeecCCHhHHHhhcCCC
Q 011501 4 TRIGLAGLAVMGQNLALNIAE-KGFPIS-VYNR----------TTSKVDETVERAKQEGNL-PLYGFHDPESFVHSIQKP 70 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~-~G~~V~-v~dr----------~~~~~~~~~~~~~~~~~~-~~~~~~s~~e~~~~l~~a 70 (484)
++|.|.|.|+||...++.|.+ .|.+|. +.|+ +++.+.++.+....-.++ +.... +.+++... .+
T Consensus 210 ~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~-~~~eil~~--~~ 286 (415)
T 2tmg_A 210 ATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERI-TNEELLEL--DV 286 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEE-CHHHHTTC--SC
T ss_pred CEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEc-CchhhhcC--CC
Confidence 689999999999999999999 999877 5566 666666666542100011 01122 45565442 49
Q ss_pred cEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 71 RVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 71 dvIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
|+++-|-+...-..+. .+.+ .-++|+...|... +.+..+.+.++|+.++.
T Consensus 287 DIliP~A~~n~i~~~~----a~~l-~ak~V~EgAN~p~--t~~a~~~l~~~Gi~~~P 336 (415)
T 2tmg_A 287 DILVPAALEGAIHAGN----AERI-KAKAVVEGANGPT--TPEADEILSRRGILVVP 336 (415)
T ss_dssp SEEEECSSTTSBCHHH----HTTC-CCSEEECCSSSCB--CHHHHHHHHHTTCEEEC
T ss_pred cEEEecCCcCccCccc----HHHc-CCeEEEeCCCccc--CHHHHHHHHHCCCEEEC
Confidence 9999997765332222 2334 5678888888763 45666778899998764
No 360
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=96.12 E-value=0.0066 Score=61.22 Aligned_cols=97 Identities=16% Similarity=0.269 Sum_probs=56.7
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCCC-cEE-EEe-C-Chh-HHHHHHHH--------hhhcCCCCeeecCCHhHHHhh
Q 011501 1 MVQTRIGLAG-LAVMGQNLALNIAEKGF-PIS-VYN-R-TTS-KVDETVER--------AKQEGNLPLYGFHDPESFVHS 66 (484)
Q Consensus 1 M~~~~IgiIG-lG~mG~~lA~~L~~~G~-~V~-v~d-r-~~~-~~~~~~~~--------~~~~~~~~~~~~~s~~e~~~~ 66 (484)
|+++|||||| .|..|.-|.+.|.++-+ ++. ++. + +.. ++.+.... +.. .+.+... +.++..+.
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~--~~~v~~~-~~~~~~~~ 93 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQ--DIVVQEC-KPEGNFLE 93 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHH--TCBCEES-SSCTTGGG
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccc--cceEEeC-chhhhccc
Confidence 6667899999 69999999999988753 553 442 2 222 12211100 000 0012111 22212344
Q ss_pred cCCCcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 67 IQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 67 l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
+|+||+|+|.+ ...+....+ +..|..|||.|+..
T Consensus 94 ---~Dvvf~alp~~-~s~~~~~~~---~~~G~~VIDlSa~f 127 (381)
T 3hsk_A 94 ---CDVVFSGLDAD-VAGDIEKSF---VEAGLAVVSNAKNY 127 (381)
T ss_dssp ---CSEEEECCCHH-HHHHHHHHH---HHTTCEEEECCSTT
T ss_pred ---CCEEEECCChh-HHHHHHHHH---HhCCCEEEEcCCcc
Confidence 99999999987 444444444 34789999999875
No 361
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.11 E-value=0.022 Score=58.24 Aligned_cols=115 Identities=13% Similarity=0.148 Sum_probs=75.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEE-EEeC----------ChhHHHHHHHHhhhcCCC-CeeecCCHhHHHhhcCCC
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPIS-VYNR----------TTSKVDETVERAKQEGNL-PLYGFHDPESFVHSIQKP 70 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~-v~dr----------~~~~~~~~~~~~~~~~~~-~~~~~~s~~e~~~~l~~a 70 (484)
-++|+|.|.|++|...|+.|.+.|.+|. +.|+ +.+.+.++.+....-.++ ..+. .+.+++... .+
T Consensus 235 g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~-i~~~ei~~~--~~ 311 (440)
T 3aog_A 235 GARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEP-LPAADFWGL--PV 311 (440)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEE-CCHHHHTTC--CC
T ss_pred CCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceE-cCchhhhcC--CC
Confidence 3689999999999999999999999887 6676 566666665542110001 0122 245565532 49
Q ss_pred cEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 71 RVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 71 dvIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
|+++-|.+...-..+ -++.+ .-++|+...|.. .+.+..+.+.++|+.|+.
T Consensus 312 DIlvPcA~~n~i~~~----na~~l-~ak~VvEgAN~p--~t~eA~~iL~~~GI~~~P 361 (440)
T 3aog_A 312 EFLVPAALEKQITEQ----NAWRI-RARIVAEGANGP--TTPAADDILLEKGVLVVP 361 (440)
T ss_dssp SEEEECSSSSCBCTT----TGGGC-CCSEEECCSSSC--BCHHHHHHHHHHTCEEEC
T ss_pred cEEEecCCcCccchh----hHHHc-CCcEEEecCccc--cCHHHHHHHHHCCCEEEC
Confidence 999998765432222 22333 567888888876 345667788899998774
No 362
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.09 E-value=0.011 Score=60.97 Aligned_cols=98 Identities=19% Similarity=0.193 Sum_probs=65.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCC-C---cEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKG-F---PISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G-~---~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
+||.|||+|.||+.++..++++. + +|++.|++.... +..+... .+++...|.+
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~-------------------~~~~~~g----~~~~~~~Vda 70 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV-------------------DVAQQYG----VSFKLQQITP 70 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC-------------------CHHHHHT----CEEEECCCCT
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhh-------------------hHHhhcC----CceeEEeccc
Confidence 68999999999999999999864 4 688888764321 1111111 3344444433
Q ss_pred CchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccC
Q 011501 80 GSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGV 130 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv 130 (484)
+ .+++++.. .+.++++||+.+- +.....+.+.+.+.|++|+|..+
T Consensus 71 d-nv~~~l~a---Ll~~~DvVIN~s~--~~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 71 Q-NYLEVIGS---TLEENDFLIDVSI--GISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp T-THHHHTGG---GCCTTCEEEECCS--SSCHHHHHHHHHHHTCEEEESSC
T ss_pred h-hHHHHHHH---HhcCCCEEEECCc--cccCHHHHHHHHHcCCCEEECCC
Confidence 3 44444433 3445699998663 44666788888899999999864
No 363
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=96.08 E-value=0.029 Score=55.49 Aligned_cols=100 Identities=16% Similarity=0.140 Sum_probs=60.1
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCC--c-----EEEEeCCh--hHHHHHHHHhhhc-CCC--CeeecCCHhHHHhhcCC
Q 011501 3 QTRIGLAG-LAVMGQNLALNIAEKGF--P-----ISVYNRTT--SKVDETVERAKQE-GNL--PLYGFHDPESFVHSIQK 69 (484)
Q Consensus 3 ~~~IgiIG-lG~mG~~lA~~L~~~G~--~-----V~v~dr~~--~~~~~~~~~~~~~-~~~--~~~~~~s~~e~~~~l~~ 69 (484)
.+||.|+| +|.+|.+++..|+..|. + +.++|+++ ++++......... ..+ ++....+..+.++.
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~d--- 79 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKD--- 79 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTT---
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCC---
Confidence 46899999 79999999999998876 5 99999975 2333222111110 000 23444555555555
Q ss_pred CcEEEEecCCCc---------------hHHHHHHHHhhhcCCCCEEEecCC
Q 011501 70 PRVIIMLVKAGS---------------PVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 70 advIi~~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st 105 (484)
+|+||++--.+. .++++++.+..+-.++-.++..||
T Consensus 80 aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN 130 (333)
T 5mdh_A 80 LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN 130 (333)
T ss_dssp CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 999999752211 133444555555434434777775
No 364
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=96.07 E-value=0.032 Score=58.32 Aligned_cols=111 Identities=21% Similarity=0.299 Sum_probs=66.7
Q ss_pred CeEEEEcccHHHHH-HHHHHHhCCCcEEEEeCChhH-HHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEe--cCC
Q 011501 4 TRIGLAGLAVMGQN-LALNIAEKGFPISVYNRTTSK-VDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIML--VKA 79 (484)
Q Consensus 4 ~~IgiIGlG~mG~~-lA~~L~~~G~~V~v~dr~~~~-~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~--vp~ 79 (484)
++|.|||+|..|.+ +|+.|.+.|++|+++|..+.. .+.+.+.+. .+..-.+++. +.. +|+||.+ +|.
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi-----~~~~g~~~~~-~~~---~d~vV~Spgi~~ 93 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGA-----QIYFHHRPEN-VLD---ASVVVVSTAISA 93 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTC-----EEESSCCGGG-GTT---CSEEEECTTSCT
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCC-----EEECCCCHHH-cCC---CCEEEECCCCCC
Confidence 58999999999985 999999999999999976543 344444332 1222223333 333 8999886 454
Q ss_pred Cch-HHHHHH---------HHh-hhcCCC-CEEEecCCCChHHHHHHHHHHHHcCC
Q 011501 80 GSP-VDQTIK---------TLS-VYMEKG-DCIIDGGNEWYENTERRQKAVAELGL 123 (484)
Q Consensus 80 ~~~-v~~vl~---------~l~-~~l~~g-~iiId~st~~~~~~~~~~~~l~~~g~ 123 (484)
+.. +....+ +++ ..++.. -+-|-.|+++-.++.-+...+...|.
T Consensus 94 ~~p~~~~a~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~ 149 (494)
T 4hv4_A 94 DNPEIVAAREARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAGL 149 (494)
T ss_dssp TCHHHHHHHHTTCCEEEHHHHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHCCCCEEcHHHHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHhcCC
Confidence 422 221111 222 223322 24555666665555556677777774
No 365
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=96.02 E-value=0.02 Score=54.63 Aligned_cols=87 Identities=14% Similarity=0.200 Sum_probs=54.8
Q ss_pred CCCCe-EEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEE--e
Q 011501 1 MVQTR-IGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIM--L 76 (484)
Q Consensus 1 M~~~~-IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~--~ 76 (484)
|.+.| +-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.++ =
T Consensus 1 Ml~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~---~~~~~~~~D 61 (264)
T 3tfo_A 1 MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA----------------G---GTALAQVLD 61 (264)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT----------------T---CEEEEEECC
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------------C---CcEEEEEcC
Confidence 54445 44455 578999999999999999999999998877765543210 0 222222 2
Q ss_pred cCCCchHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 77 VKAGSPVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 77 vp~~~~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
+.+.+.++.+++.+.....+=+++|++...
T Consensus 62 v~d~~~v~~~~~~~~~~~g~iD~lVnnAG~ 91 (264)
T 3tfo_A 62 VTDRHSVAAFAQAAVDTWGRIDVLVNNAGV 91 (264)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 333345556666665544445677776543
No 366
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=95.96 E-value=0.02 Score=57.05 Aligned_cols=73 Identities=11% Similarity=0.125 Sum_probs=49.1
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHH--HHHHHHhhhcCCCCeeec---CCHhHHHhhcCCCcEEEEe
Q 011501 3 QTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKV--DETVERAKQEGNLPLYGF---HDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 3 ~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~--~~~~~~~~~~~~~~~~~~---~s~~e~~~~l~~advIi~~ 76 (484)
.|+|.|.| .|.+|..++..|++.|++|.+.+|++++. +.+...... .+... .+.+.+.+.++.+|+||.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v----~~v~~D~l~d~~~l~~~~~~~d~Vi~~ 80 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNV----TLFQGPLLNNVPLMDTLFEGAHLAFIN 80 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTE----EEEESCCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCc----EEEECCccCCHHHHHHHHhcCCEEEEc
Confidence 46899998 59999999999999999999999988764 233211000 01112 2444454445569999977
Q ss_pred cCC
Q 011501 77 VKA 79 (484)
Q Consensus 77 vp~ 79 (484)
...
T Consensus 81 a~~ 83 (352)
T 1xgk_A 81 TTS 83 (352)
T ss_dssp CCS
T ss_pred CCC
Confidence 643
No 367
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=95.94 E-value=0.055 Score=52.96 Aligned_cols=71 Identities=14% Similarity=0.253 Sum_probs=45.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCC--cEEEEeC--ChhHHHH----HHHHhhhcCCCCeeecC---CHhHHHhhcCCCc
Q 011501 4 TRIGLAGL-AVMGQNLALNIAEKGF--PISVYNR--TTSKVDE----TVERAKQEGNLPLYGFH---DPESFVHSIQKPR 71 (484)
Q Consensus 4 ~~IgiIGl-G~mG~~lA~~L~~~G~--~V~v~dr--~~~~~~~----~~~~~~~~~~~~~~~~~---s~~e~~~~l~~ad 71 (484)
|||.|+|. |.+|.+++..|+..|+ ++.++|+ ++++.+. +....... +..+.... +..+.++. +|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~-~~~~~i~~~~d~l~~al~g---aD 76 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGT-RSDANIYVESDENLRIIDE---SD 76 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTS-CCCCEEEEEETTCGGGGTT---CS
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhc-CCCeEEEeCCcchHHHhCC---CC
Confidence 48999999 9999999999998885 6889999 7654432 22211100 00122222 13444554 99
Q ss_pred EEEEecC
Q 011501 72 VIIMLVK 78 (484)
Q Consensus 72 vIi~~vp 78 (484)
+||++.-
T Consensus 77 ~Vi~~Ag 83 (313)
T 1hye_A 77 VVIITSG 83 (313)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 9999873
No 368
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.94 E-value=0.0063 Score=56.07 Aligned_cols=35 Identities=17% Similarity=0.464 Sum_probs=31.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCCh
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTT 36 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~ 36 (484)
|+ .+|.|||.|.-|...|..|+++|++|+++|+++
T Consensus 1 Mt-~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 1 MT-VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp -C-CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CC-CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 54 479999999999999999999999999999875
No 369
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=95.86 E-value=0.0099 Score=59.49 Aligned_cols=92 Identities=11% Similarity=0.237 Sum_probs=55.5
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCC-cEEEE-eCCh--hHHHHHHH---------HhhhcCCCCeeecCCHhHHHhhcCC
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGF-PISVY-NRTT--SKVDETVE---------RAKQEGNLPLYGFHDPESFVHSIQK 69 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~-~V~v~-dr~~--~~~~~~~~---------~~~~~~~~~~~~~~s~~e~~~~l~~ 69 (484)
+|||||| .|..|.-|.+.|.++-+ ++... .++. .++..... .... +.+.. .+.+++ + .
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~---~~v~~-~~~~~~-~---~ 79 (359)
T 4dpk_A 8 LKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIAD---MEIKP-TDPKLM-D---D 79 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHT---CBCEE-CCGGGC-T---T
T ss_pred CeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhccccccccccccccc---ceEEe-CCHHHh-c---C
Confidence 4899999 69999999998887653 55443 3332 12222100 0000 01111 233332 3 4
Q ss_pred CcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 70 PRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 70 advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
+|+||+|+|.+. ..+....+ +..|..+||.|+..
T Consensus 80 vDvvf~a~p~~~-s~~~a~~~---~~~G~~vIDlSa~~ 113 (359)
T 4dpk_A 80 VDIIFSPLPQGA-AGPVEEQF---AKEGFPVISNSPDH 113 (359)
T ss_dssp CCEEEECCCTTT-HHHHHHHH---HHTTCEEEECSSTT
T ss_pred CCEEEECCChHH-HHHHHHHH---HHCCCEEEEcCCCc
Confidence 999999999984 44444444 45789999999875
No 370
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=95.86 E-value=0.0099 Score=59.49 Aligned_cols=92 Identities=11% Similarity=0.237 Sum_probs=55.5
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCC-cEEEE-eCCh--hHHHHHHH---------HhhhcCCCCeeecCCHhHHHhhcCC
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGF-PISVY-NRTT--SKVDETVE---------RAKQEGNLPLYGFHDPESFVHSIQK 69 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~-~V~v~-dr~~--~~~~~~~~---------~~~~~~~~~~~~~~s~~e~~~~l~~ 69 (484)
+|||||| .|..|.-|.+.|.++-+ ++... .++. .++..... .... +.+.. .+.+++ + .
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~---~~v~~-~~~~~~-~---~ 79 (359)
T 4dpl_A 8 LKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIAD---MEIKP-TDPKLM-D---D 79 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHT---CBCEE-CCGGGC-T---T
T ss_pred CeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhccccccccccccccc---ceEEe-CCHHHh-c---C
Confidence 4899999 69999999998887653 55443 3332 12222100 0000 01111 233332 3 4
Q ss_pred CcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 70 PRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 70 advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
+|+||+|+|.+. ..+....+ +..|..+||.|+..
T Consensus 80 vDvvf~a~p~~~-s~~~a~~~---~~~G~~vIDlSa~~ 113 (359)
T 4dpl_A 80 VDIIFSPLPQGA-AGPVEEQF---AKEGFPVISNSPDH 113 (359)
T ss_dssp CCEEEECCCTTT-HHHHHHHH---HHTTCEEEECSSTT
T ss_pred CCEEEECCChHH-HHHHHHHH---HHCCCEEEEcCCCc
Confidence 999999999984 44444444 45789999999875
No 371
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.85 E-value=0.042 Score=54.66 Aligned_cols=96 Identities=16% Similarity=0.259 Sum_probs=56.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC-CCcEEEEeC---ChhHHHHHHHHhhhcCCC----------------Ceeec--CCH
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEK-GFPISVYNR---TTSKVDETVERAKQEGNL----------------PLYGF--HDP 60 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~v~dr---~~~~~~~~~~~~~~~~~~----------------~~~~~--~s~ 60 (484)
|+||||+|.|.+|..+.+.|.++ .++|...+- +.+....+.+....-+.+ .+... .++
T Consensus 17 ~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~dp 96 (354)
T 3cps_A 17 QGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKDP 96 (354)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSCG
T ss_pred ceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCCh
Confidence 56999999999999999999987 567665542 233222332211000000 11122 245
Q ss_pred hHHH---hhcCCCcEEEEecCCCchHHHHHHHHhhhcCCCC--EEEecCC
Q 011501 61 ESFV---HSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGD--CIIDGGN 105 (484)
Q Consensus 61 ~e~~---~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~--iiId~st 105 (484)
+++. .. +|+||.|+|.....+ . ...++..|. +|||.+.
T Consensus 97 ~~i~w~~~~---vDvV~eatg~~~s~e-~---a~~~l~~GakkvVId~pa 139 (354)
T 3cps_A 97 AEIPWGASG---AQIVCESTGVFTTEE-K---ASLHLKGGAKKVIISAPP 139 (354)
T ss_dssp GGCCHHHHT---CCEEEECSSSCCSHH-H---HGGGGTTTCSEEEESSCC
T ss_pred HHCCcccCC---CCEEEECCCchhhHH-H---HHHHHHcCCcEEEEeCCC
Confidence 5431 23 899999999875433 2 234566677 8999876
No 372
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.84 E-value=0.0078 Score=57.67 Aligned_cols=38 Identities=24% Similarity=0.400 Sum_probs=34.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhH
Q 011501 1 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSK 38 (484)
Q Consensus 1 M~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~ 38 (484)
|++|+|.|.|+|.+|..++..|++.|++|++.+|++++
T Consensus 1 M~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQP 38 (286)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 77789999999999999999999999999999998765
No 373
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.83 E-value=0.034 Score=53.61 Aligned_cols=42 Identities=14% Similarity=0.203 Sum_probs=37.2
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHH
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVER 45 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~ 45 (484)
+++-|+| .|-+|..++..|++.|++|++++|++++.+++.+.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~ 162 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADS 162 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHH
Confidence 5788999 99999999999999999999999999887766543
No 374
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=95.83 E-value=0.0078 Score=63.99 Aligned_cols=111 Identities=14% Similarity=0.126 Sum_probs=72.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHh--hcCCCcEEEEecCCCc
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVH--SIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~--~l~~advIi~~vp~~~ 81 (484)
++|.|+|+|.+|..+|+.|.+.|++|.+.|.++++++++. . -+.+..+-+++.+ .++++|.++++++++
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~-~-------~i~gD~t~~~~L~~agi~~ad~vi~~~~~d- 419 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDH-V-------VVYGDATVGQTLRQAGIDRASGIIVTTNDD- 419 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS-C-------EEESCSSSSTHHHHHTTTSCSEEEECCSCH-
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcC-C-------EEEeCCCCHHHHHhcCccccCEEEEECCCc-
Confidence 4799999999999999999999999999999998865542 1 1222233333333 356799999999876
Q ss_pred hHHHHHHHHhhhcCCC-CEEEecCCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 82 PVDQTIKTLSVYMEKG-DCIIDGGNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g-~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
...-.+..++..+.+. .+|.-..+... .+.+...|+..+-.|
T Consensus 420 ~~ni~~~~~ak~l~~~~~iiar~~~~~~------~~~l~~~G~d~vi~p 462 (565)
T 4gx0_A 420 STNIFLTLACRHLHSHIRIVARANGEEN------VDQLYAAGADFVVSN 462 (565)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEEESSTTS------HHHHHHHTCSEEEEH
T ss_pred hHHHHHHHHHHHHCCCCEEEEEECCHHH------HHHHHHcCCCEEEcc
Confidence 3333334444555555 55555544432 233445577665444
No 375
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=95.83 E-value=0.052 Score=55.17 Aligned_cols=110 Identities=16% Similarity=0.222 Sum_probs=76.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEE-EEeC----------ChhHHHHHHHHhhhcCCCCeee-cCCHhHHHhhcCCCc
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPIS-VYNR----------TTSKVDETVERAKQEGNLPLYG-FHDPESFVHSIQKPR 71 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~-v~dr----------~~~~~~~~~~~~~~~~~~~~~~-~~s~~e~~~~l~~ad 71 (484)
++|.|.|.|++|...|+.|.+.|.+|. +.|+ +.+.+.++.+... .+.. .-+.+++... .+|
T Consensus 219 k~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g-----~v~~~~~~~~e~~~~--~~D 291 (419)
T 3aoe_E 219 ARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATG-----SLPRLDLAPEEVFGL--EAE 291 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHS-----SCSCCCBCTTTGGGS--SCS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhC-----Ccceeeccchhhhcc--Cce
Confidence 589999999999999999999999887 7788 7777777665432 1110 1133444432 499
Q ss_pred EEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 72 VIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 72 vIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
+++-|-....-..+. .+.+ +=++|+...|.. .|.+..+.+.++|+.|+.
T Consensus 292 VliP~A~~n~i~~~~----A~~l-~ak~V~EgAN~p--~t~~A~~~L~~~Gi~~~P 340 (419)
T 3aoe_E 292 VLVLAAREGALDGDR----ARQV-QAQAVVEVANFG--LNPEAEAYLLGKGALVVP 340 (419)
T ss_dssp EEEECSCTTCBCHHH----HTTC-CCSEEEECSTTC--BCHHHHHHHHHHTCEEEC
T ss_pred EEEecccccccccch----HhhC-CceEEEECCCCc--CCHHHHHHHHHCCCEEEC
Confidence 999987665332322 3334 347899998876 345667788999998874
No 376
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.79 E-value=0.1 Score=50.89 Aligned_cols=104 Identities=15% Similarity=0.244 Sum_probs=76.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHccCCCCCCcccch
Q 011501 321 VDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDP 400 (484)
Q Consensus 321 ~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~Gcii~s~ll~~i~~~~~~~~~~~~ll~~~ 400 (484)
.+.++.+|.+.|.+.++.+..++|++.+.++. ++|..++.++.+.| ...|++++.....+.+.+.. +
T Consensus 184 ~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~------G~d~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~------~ 250 (310)
T 3doj_A 184 VGNGAKMKLIVNMIMGSMMNAFSEGLVLADKS------GLSSDTLLDILDLG-AMTNPMFKGKGPSMNKSSYP------P 250 (310)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TSCHHHHHHHHHHS-TTCCHHHHHHHHHHHTTCCC------C
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHHhc-ccccHHHHHHhhhhhcCCCC------C
Confidence 47889999999999999999999999998753 39999999999876 34677766554444332211 1
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011501 401 EFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLAYFDT 439 (484)
Q Consensus 401 ~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~~~~~ 439 (484)
-|. +.....+++-++..|-+.|+|+|...++...|..
T Consensus 251 ~f~--~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~ 287 (310)
T 3doj_A 251 AFP--LKHQQKDMRLALALGDENAVSMPVAAAANEAFKK 287 (310)
T ss_dssp SSB--HHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred Ccc--HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 121 1123345678889999999999999988876653
No 377
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=95.76 E-value=0.042 Score=51.20 Aligned_cols=44 Identities=20% Similarity=0.399 Sum_probs=35.8
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHH
Q 011501 1 MVQTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 44 (484)
Q Consensus 1 M~~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~ 44 (484)
|+++++-|.|. |-+|..+|+.|++.|++|.+.+|++++.+++.+
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~ 45 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQEL 45 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 66666777775 789999999999999999999999888776554
No 378
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=95.73 E-value=0.069 Score=52.50 Aligned_cols=75 Identities=16% Similarity=0.251 Sum_probs=47.3
Q ss_pred CC-CCeEEEEcc-cHHHHHHHHHHHhCCC-------cEEEEeCCh--hHHHHHHHHhhhcC-CC--CeeecCCHhHHHhh
Q 011501 1 MV-QTRIGLAGL-AVMGQNLALNIAEKGF-------PISVYNRTT--SKVDETVERAKQEG-NL--PLYGFHDPESFVHS 66 (484)
Q Consensus 1 M~-~~~IgiIGl-G~mG~~lA~~L~~~G~-------~V~v~dr~~--~~~~~~~~~~~~~~-~~--~~~~~~s~~e~~~~ 66 (484)
|. .|||.|+|. |.+|+.++..|+..|+ +|.++|+++ ++.+.......... .+ .+....+..+.++.
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~~ 80 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKD 80 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhCC
Confidence 53 368999996 9999999999999996 899999975 22222111111000 00 12333455555554
Q ss_pred cCCCcEEEEecC
Q 011501 67 IQKPRVIIMLVK 78 (484)
Q Consensus 67 l~~advIi~~vp 78 (484)
+|+||.+..
T Consensus 81 ---~D~Vih~Ag 89 (327)
T 1y7t_A 81 ---ADYALLVGA 89 (327)
T ss_dssp ---CSEEEECCC
T ss_pred ---CCEEEECCC
Confidence 999998753
No 379
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.72 E-value=0.04 Score=54.80 Aligned_cols=95 Identities=24% Similarity=0.237 Sum_probs=58.5
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhhc-CCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 3 QTRIGLAG-LAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQE-GNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 3 ~~~IgiIG-lG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~~-~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
|-|||||| .|..|.-|.+.|.++-. ++.........-+.+.+....- ..+.+.. .+.+++.+. +|++|+|+|.
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~-~~~~~~~~~---~Dvvf~alp~ 88 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSE-FDPEKVSKN---CDVLFTALPA 88 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBC-CCHHHHHHH---CSEEEECCST
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEe-CCHHHhhcC---CCEEEECCCc
Confidence 35899997 69999999999998854 5555543222111121110000 0111222 245666555 9999999999
Q ss_pred CchHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 80 GSPVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
+ ... ++.+.+ .|..|||.|+..
T Consensus 89 ~-~s~----~~~~~~-~g~~VIDlSsdf 110 (351)
T 1vkn_A 89 G-ASY----DLVREL-KGVKIIDLGADF 110 (351)
T ss_dssp T-HHH----HHHTTC-CSCEEEESSSTT
T ss_pred H-HHH----HHHHHh-CCCEEEECChhh
Confidence 8 333 344555 799999999875
No 380
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=95.69 E-value=0.029 Score=57.47 Aligned_cols=111 Identities=13% Similarity=0.082 Sum_probs=69.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC---cEEEEe----CC----hh-H---HHHHHHHhhhcCCCCe-eecCCHhHHHhhc
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF---PISVYN----RT----TS-K---VDETVERAKQEGNLPL-YGFHDPESFVHSI 67 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~---~V~v~d----r~----~~-~---~~~~~~~~~~~~~~~~-~~~~s~~e~~~~l 67 (484)
.+|.|+|+|.+|.+++..|.+.|. +|+++| |+ .+ . +..+....... .+. ....++.+.++.
T Consensus 187 ~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~--~~~~~~~~~L~e~l~~- 263 (439)
T 2dvm_A 187 ITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKK--TNGENIEGGPQEALKD- 263 (439)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTT--SCTTCCCSSHHHHHTT-
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhc--cccccccccHHHHhcc-
Confidence 579999999999999999999998 899999 87 32 2 21111111110 000 013456777666
Q ss_pred CCCcEEEEecCC--CchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEE
Q 011501 68 QKPRVIIMLVKA--GSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYL 126 (484)
Q Consensus 68 ~~advIi~~vp~--~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i 126 (484)
+|++|-++|. +...+ .....+.++.+|+|+++-.++.. .+...+.|...+
T Consensus 264 --aDVlInaT~~~~G~~~~----e~v~~m~~~~iVfDLynP~~t~~---~~~A~~~G~~iv 315 (439)
T 2dvm_A 264 --ADVLISFTRPGPGVIKP----QWIEKMNEDAIVFPLANPVPEIL---PEEAKKAGARIV 315 (439)
T ss_dssp --CSEEEECSCCCSSSSCH----HHHTTSCTTCEEEECCSSSCSSC---HHHHHHHTCSEE
T ss_pred --CCEEEEcCCCccCCCCh----HHHHhcCCCCEEEECCCCCCcch---HHHHHHcCCeEE
Confidence 9999999997 43222 23345667889999965443333 233334466555
No 381
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=95.68 E-value=0.033 Score=54.08 Aligned_cols=34 Identities=18% Similarity=0.234 Sum_probs=31.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCcEEEEeCCh
Q 011501 3 QTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTT 36 (484)
Q Consensus 3 ~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~ 36 (484)
||+|.|.|. |.+|..++..|++.|++|.+.+|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCc
Confidence 468999995 9999999999999999999999986
No 382
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=95.67 E-value=0.061 Score=56.60 Aligned_cols=113 Identities=11% Similarity=0.080 Sum_probs=68.1
Q ss_pred CCeEEEEcccHHHHH-HHHHHHhCCCcEEEEeCCh--hHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEe--c
Q 011501 3 QTRIGLAGLAVMGQN-LALNIAEKGFPISVYNRTT--SKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIML--V 77 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~-lA~~L~~~G~~V~v~dr~~--~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~--v 77 (484)
.++|-|||.|..|.+ +|+.|.+.|++|+++|.+. ...+.+.+.+. .+..-.+++.+... +|+||.+ +
T Consensus 19 ~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi-----~~~~G~~~~~~~~~---~d~vV~Spgi 90 (524)
T 3hn7_A 19 GMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGV-----TIEEGYLIAHLQPA---PDLVVVGNAM 90 (524)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTC-----EEEESCCGGGGCSC---CSEEEECTTC
T ss_pred CCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCC-----EEECCCCHHHcCCC---CCEEEECCCc
Confidence 368999999999985 7999999999999999863 33455554432 12222344444333 8999885 4
Q ss_pred CCCch-HHHHHH---------HHh-hhc-CCCC-EEEecCCCChHHHHHHHHHHHHcCC
Q 011501 78 KAGSP-VDQTIK---------TLS-VYM-EKGD-CIIDGGNEWYENTERRQKAVAELGL 123 (484)
Q Consensus 78 p~~~~-v~~vl~---------~l~-~~l-~~g~-iiId~st~~~~~~~~~~~~l~~~g~ 123 (484)
|.+.. +....+ +++ ..+ +... +-|-.|+++-.++.-+...+...|.
T Consensus 91 ~~~~p~l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~G~ 149 (524)
T 3hn7_A 91 KRGMDVIEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYAGI 149 (524)
T ss_dssp CTTSHHHHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHcCC
Confidence 54432 222221 222 222 2223 4555666665555556667777764
No 383
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=95.65 E-value=0.024 Score=57.77 Aligned_cols=114 Identities=14% Similarity=0.138 Sum_probs=67.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEE-EEeCCh---------------hHHHHHHHHhhhcCCC-CeeecCCHhHHHhh
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPIS-VYNRTT---------------SKVDETVERAKQEGNL-PLYGFHDPESFVHS 66 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~-v~dr~~---------------~~~~~~~~~~~~~~~~-~~~~~~s~~e~~~~ 66 (484)
++|.|.|.|++|...|+.|.+.|.+|. +.|.++ +.+.++.+....-.++ +.+.. +.+++...
T Consensus 213 ~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i-~~~~~~~~ 291 (421)
T 2yfq_A 213 AKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERI-TDEEFWTK 291 (421)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC-------------------
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEe-CccchhcC
Confidence 579999999999999999999999887 678873 4555554432100000 00111 22344331
Q ss_pred cCCCcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 67 IQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 67 l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
.||+++-|-+.+.-..+.. +.+ ..++|+...|.. .+.+..+.+.++|+.|+.
T Consensus 292 --~~DIliP~A~~n~i~~~~A----~~l-~ak~VvEgAN~P--~t~ea~~il~~~GI~~~P 343 (421)
T 2yfq_A 292 --EYDIIVPAALENVITGERA----KTI-NAKLVCEAANGP--TTPEGDKVLTERGINLTP 343 (421)
T ss_dssp -----CEEECSCSSCSCHHHH----TTC-CCSEEECCSSSC--SCHHHHHHHHHHTCEEEC
T ss_pred --CccEEEEcCCcCcCCcccH----HHc-CCeEEEeCCccc--cCHHHHHHHHHCCCEEEC
Confidence 3899999877653333332 333 578898888876 346667778889998764
No 384
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=95.65 E-value=0.027 Score=53.98 Aligned_cols=83 Identities=13% Similarity=0.149 Sum_probs=53.9
Q ss_pred eEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEE--ecCCCc
Q 011501 5 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIM--LVKAGS 81 (484)
Q Consensus 5 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~--~vp~~~ 81 (484)
.+-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.++ =+.+.+
T Consensus 26 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~---~~~~~~~~Dv~d~~ 86 (279)
T 3sju_A 26 TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA----------------G---HDVDGSSCDVTSTD 86 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----------------T---CCEEEEECCTTCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------C---CcEEEEECCCCCHH
Confidence 355555 588999999999999999999999998877665533210 0 223222 233444
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
.++.+++.+.....+=+++|++...
T Consensus 87 ~v~~~~~~~~~~~g~id~lv~nAg~ 111 (279)
T 3sju_A 87 EVHAAVAAAVERFGPIGILVNSAGR 111 (279)
T ss_dssp HHHHHHHHHHHHHCSCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCC
Confidence 5666666665555455777776543
No 385
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.54 E-value=0.046 Score=52.97 Aligned_cols=102 Identities=14% Similarity=0.060 Sum_probs=70.9
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCC-----ccchhhHHHHHHHHccCCC-CC
Q 011501 321 VDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGC-----IIRAIFLDRIKKAYDRNPD-LA 394 (484)
Q Consensus 321 ~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~Gc-----ii~s~ll~~i~~~~~~~~~-~~ 394 (484)
.+.++.+|+++|.+.+..+..++|++.+.++. ++|..+++++|+..- .-+|++.+ .+. +.
T Consensus 174 ~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~------G~d~~~~~~~~~~~~~i~~~~~~s~~~~--------~~~~~~ 239 (296)
T 3qha_A 174 PGAGTRMKLARNMLTFTSYAAACEAMKLAEAA------GLDLQALGRVVRHTDALTGGPGAIMVRD--------NMKDLE 239 (296)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCCHHHHHHHHHHHHHHHCCGGGGCCCS--------SCSCCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHhhhcchHHHHhcCcccCHHhh--------chhhhh
Confidence 47889999999999999999999999998753 499999977776421 22343321 111 11
Q ss_pred CcccchhHHH--HH-HhhhhhHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011501 395 NVLVDPEFAK--EI-IERQSAWRRVVCLAINSGISTPGMSSSLAYFD 438 (484)
Q Consensus 395 ~ll~~~~~~~--~~-~~~~~~~~~~v~~a~~~g~p~p~~~~al~~~~ 438 (484)
. .++-|.- .+ .-...+++-++..|.+.|+|+|.+..+...|.
T Consensus 240 ~--~~~~f~~~~~~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~ 284 (296)
T 3qha_A 240 P--DNFLYQPFLHTRGLGEKDLSLALALGEAVSVDLPLARLAYEGLA 284 (296)
T ss_dssp T--TSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred c--CCCCCchhhhhhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 1 2233332 00 23455678888999999999999999987554
No 386
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.53 E-value=0.036 Score=53.85 Aligned_cols=73 Identities=21% Similarity=0.271 Sum_probs=46.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCcEEEEeCChh-HHHHHHHHhhhcCCCCeee--cCCHhHHHhhcCCCcEEEEecC
Q 011501 4 TRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTS-KVDETVERAKQEGNLPLYG--FHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 4 ~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~-~~~~~~~~~~~~~~~~~~~--~~s~~e~~~~l~~advIi~~vp 78 (484)
++|.|+|. |.+|..++..|++.|++|.+.+|+++ +.+.+.+... . +..+.. ..+.+++.+.++.+|+||.+.+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~-~-~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS-L-GAIIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH-T-TCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc-C-CCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 37999995 99999999999999999999999875 3322211100 0 000111 1234444444455777777764
No 387
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=95.53 E-value=0.0047 Score=61.38 Aligned_cols=92 Identities=11% Similarity=0.103 Sum_probs=54.9
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCC---CcEEEEe-C-ChhHHHHHHHHhhhcCCCCeeecC-CHhHHHhhcCCCcEE
Q 011501 1 MVQTRIGLAG-LAVMGQNLALNIAEKG---FPISVYN-R-TTSKVDETVERAKQEGNLPLYGFH-DPESFVHSIQKPRVI 73 (484)
Q Consensus 1 M~~~~IgiIG-lG~mG~~lA~~L~~~G---~~V~v~d-r-~~~~~~~~~~~~~~~~~~~~~~~~-s~~e~~~~l~~advI 73 (484)
|.++||+|+| .|.+|..+.+.|.+++ +++..++ + +..+.-.+. +. .+.... +++. .+. +|+|
T Consensus 1 ~~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~--~~-----~i~~~~~~~~~-~~~---vDvV 69 (336)
T 2r00_A 1 SQQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFN--GK-----TVRVQNVEEFD-WSQ---VHIA 69 (336)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEET--TE-----EEEEEEGGGCC-GGG---CSEE
T ss_pred CCccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeec--Cc-----eeEEecCChHH-hcC---CCEE
Confidence 3467999999 9999999999999884 3555554 2 221100000 00 122211 2222 233 9999
Q ss_pred EEecCCCchHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 74 IMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 74 i~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
|+|+|.. ...+.... ++..|..+||.|+..
T Consensus 70 f~a~g~~-~s~~~a~~---~~~~G~~vId~s~~~ 99 (336)
T 2r00_A 70 LFSAGGE-LSAKWAPI---AAEAGVVVIDNTSHF 99 (336)
T ss_dssp EECSCHH-HHHHHHHH---HHHTTCEEEECSSTT
T ss_pred EECCCch-HHHHHHHH---HHHcCCEEEEcCCcc
Confidence 9999876 33333333 345688999998864
No 388
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=95.48 E-value=0.0072 Score=60.24 Aligned_cols=42 Identities=17% Similarity=0.323 Sum_probs=35.6
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhC-CCcEEEEeCChhHHHHH
Q 011501 1 MVQTRIGLAG-LAVMGQNLALNIAEK-GFPISVYNRTTSKVDET 42 (484)
Q Consensus 1 M~~~~IgiIG-lG~mG~~lA~~L~~~-G~~V~v~dr~~~~~~~~ 42 (484)
|++|+|.|.| .|.+|..++..|++. |++|++.+|++++...+
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~ 65 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDL 65 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGG
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhh
Confidence 4567999998 699999999999998 99999999998765443
No 389
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.47 E-value=0.046 Score=53.24 Aligned_cols=101 Identities=9% Similarity=0.060 Sum_probs=70.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCc-cchhhHHHHHHHHccCCCCCCcccch
Q 011501 322 DKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCI-IRAIFLDRIKKAYDRNPDLANVLVDP 400 (484)
Q Consensus 322 ~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~Gci-i~s~ll~~i~~~~~~~~~~~~ll~~~ 400 (484)
++++.+| .+.++.++.++|++.+.++. ++|..++.++++.+.. .+|++++.....+.+++....
T Consensus 174 g~g~~~k----~~~~~~~~~~~Ea~~la~~~------Gld~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~----- 238 (306)
T 3l6d_A 174 AFATVLH----AHAFAAMVTFFEAVGAGDRF------GLPVSKTARLLLETSRFFVADALEEAVRRLETQDFKGD----- 238 (306)
T ss_dssp HHHHHHH----HHHHHHHHHHHHHHHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCTT-----
T ss_pred cHHHHHH----HHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCC-----
Confidence 5666666 67788999999999987753 4999999999987632 578887776555544321100
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011501 401 EFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLAYFDT 439 (484)
Q Consensus 401 ~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~~~~~ 439 (484)
.|. +.-...+++.++..|-+.|+|+|...++...|..
T Consensus 239 ~~~--~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~ 275 (306)
T 3l6d_A 239 QAR--LDVHADAFAHIAQSLHAQGVWTPVFDAVCQVVQR 275 (306)
T ss_dssp SSB--HHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred ccc--HHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Confidence 111 1112345688899999999999999999876653
No 390
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.44 E-value=0.025 Score=52.51 Aligned_cols=72 Identities=14% Similarity=0.153 Sum_probs=48.8
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhC--CCcEEEEeCChhHHHHHHHHhhhcCCCCeee--cCCHhHHHhhcCCCcEEEE
Q 011501 1 MVQTRIGLAG-LAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKQEGNLPLYG--FHDPESFVHSIQKPRVIIM 75 (484)
Q Consensus 1 M~~~~IgiIG-lG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~--~~s~~e~~~~l~~advIi~ 75 (484)
|++++|.|.| .|.+|..+++.|++. |++|++.+|++++.+.+. . +..... ..+.+++.+.++.+|+||.
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~---~---~~~~~~~D~~d~~~~~~~~~~~d~vi~ 75 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG---G---EADVFIGDITDADSINPAFQGIDALVI 75 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT---C---CTTEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcC---C---CeeEEEecCCCHHHHHHHHcCCCEEEE
Confidence 4567899998 699999999999999 899999999987765431 0 001111 1233444333445888887
Q ss_pred ecC
Q 011501 76 LVK 78 (484)
Q Consensus 76 ~vp 78 (484)
+..
T Consensus 76 ~a~ 78 (253)
T 1xq6_A 76 LTS 78 (253)
T ss_dssp CCC
T ss_pred ecc
Confidence 764
No 391
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=95.38 E-value=0.014 Score=58.39 Aligned_cols=34 Identities=9% Similarity=0.216 Sum_probs=26.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCC----CcE-EEEeCCh
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKG----FPI-SVYNRTT 36 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G----~~V-~v~dr~~ 36 (484)
+++|||||+|.||..++..|.+.. .+| .++|++.
T Consensus 4 ~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~ 42 (358)
T 1ebf_A 4 VVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAER 42 (358)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSB
T ss_pred eEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECCh
Confidence 358999999999999999999863 344 4567543
No 392
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=95.38 E-value=0.14 Score=44.62 Aligned_cols=120 Identities=9% Similarity=0.052 Sum_probs=73.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhC--CCcEEEEeCChhHHHHHHHHhhhcCCC-CeeecCCHhHHHhhc-CCCcEEEEecCC
Q 011501 4 TRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKQEGNL-PLYGFHDPESFVHSI-QKPRVIIMLVKA 79 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~~~~~~~~~~~~-~~~~~~s~~e~~~~l-~~advIi~~vp~ 79 (484)
.+|.-||+|. | .++..+++. +.+|+++|.+++.++.+.+.....+-. ++....+..+..... ...|+|++.-+.
T Consensus 27 ~~vldiG~G~-G-~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~~ 104 (178)
T 3hm2_A 27 ETLWDIGGGS-G-SIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGL 104 (178)
T ss_dssp EEEEEESTTT-T-HHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-T
T ss_pred CeEEEeCCCC-C-HHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCcc
Confidence 3688899997 4 344555555 679999999998887766543321100 232333433333322 458999987655
Q ss_pred CchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEec
Q 011501 80 GSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
.. ..+++.+...+++|..++-.. ..+.......+.+...+..+...
T Consensus 105 ~~--~~~l~~~~~~L~~gG~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 150 (178)
T 3hm2_A 105 TA--PGVFAAAWKRLPVGGRLVANA-VTVESEQMLWALRKQFGGTISSF 150 (178)
T ss_dssp TC--TTHHHHHHHTCCTTCEEEEEE-CSHHHHHHHHHHHHHHCCEEEEE
T ss_pred cH--HHHHHHHHHhcCCCCEEEEEe-eccccHHHHHHHHHHcCCeeEEE
Confidence 42 667788888888877666433 33445556666777777665544
No 393
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=95.37 E-value=0.039 Score=53.33 Aligned_cols=73 Identities=12% Similarity=0.342 Sum_probs=57.8
Q ss_pred CeEEEEccc-HHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGLA-VMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG-~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++.|||-+ .+|.+||..|.+.+..|+++... +.++++.+++ +|+||.++..+..
T Consensus 180 k~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~---------------------T~dl~~~~~~---ADIvV~A~G~p~~ 235 (303)
T 4b4u_A 180 KHAVVVGRSAILGKPMAMMLLQANATVTICHSR---------------------TQNLPELVKQ---ADIIVGAVGKAEL 235 (303)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------------------CSSHHHHHHT---CSEEEECSCSTTC
T ss_pred CEEEEEeccccccchHHHHHHhcCCEEEEecCC---------------------CCCHHHHhhc---CCeEEeccCCCCc
Confidence 579999965 47999999999999999998643 2356666776 9999999977643
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
+. ..++++|.+|||.+..
T Consensus 236 i~------~d~vk~GavVIDVGin 253 (303)
T 4b4u_A 236 IQ------KDWIKQGAVVVDAGFH 253 (303)
T ss_dssp BC------GGGSCTTCEEEECCCB
T ss_pred cc------cccccCCCEEEEecee
Confidence 22 2468999999999865
No 394
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=95.37 E-value=0.0072 Score=60.59 Aligned_cols=92 Identities=9% Similarity=0.137 Sum_probs=53.6
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCc---EEEEeCChhHHHHHHHHhhhcCCCCeeec-CCHhHHHhhcCCCcEEEEec
Q 011501 3 QTRIGLAG-LAVMGQNLALNIAEKGFP---ISVYNRTTSKVDETVERAKQEGNLPLYGF-HDPESFVHSIQKPRVIIMLV 77 (484)
Q Consensus 3 ~~~IgiIG-lG~mG~~lA~~L~~~G~~---V~v~dr~~~~~~~~~~~~~~~~~~~~~~~-~s~~e~~~~l~~advIi~~v 77 (484)
++||+||| .|..|.-|.+.|.+++|+ +.........-+.+.-.+. ..... .+.++ ++.+|+||+|+
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~~-----~~~~~~~~~~~----~~~~Dvvf~a~ 72 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQ-----DITIEETTETA----FEGVDIALFSA 72 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETTE-----EEEEEECCTTT----TTTCSEEEECS
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecCC-----CceEeeCCHHH----hcCCCEEEECC
Confidence 45999999 799999999999998773 3333321110000000000 01111 12222 23499999999
Q ss_pred CCCchHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 78 KAGSPVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 78 p~~~~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
|.. ...+....+ +..|..|||.|+..
T Consensus 73 ~~~-~s~~~a~~~---~~~G~~vIDlSa~~ 98 (366)
T 3pwk_A 73 GSS-TSAKYAPYA---VKAGVVVVDNTSYF 98 (366)
T ss_dssp CHH-HHHHHHHHH---HHTTCEEEECSSTT
T ss_pred ChH-hHHHHHHHH---HHCCCEEEEcCCcc
Confidence 876 334444333 45788999999864
No 395
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.37 E-value=0.029 Score=53.66 Aligned_cols=72 Identities=14% Similarity=0.172 Sum_probs=49.3
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhC-CCcEEEEeCChhHHHHHHHHhhhcCCCCeee--cCCHhHHHhhcCCCcEEEEecCC
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEK-GFPISVYNRTTSKVDETVERAKQEGNLPLYG--FHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~-G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~--~~s~~e~~~~l~~advIi~~vp~ 79 (484)
|+|.|.| .|.+|..++..|.+. |++|.+.+|++++...+...+. .+.. ..+++++.+.++.+|+||.+...
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v-----~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKV-----SVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTB-----EEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCC-----EEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 4799998 599999999999998 9999999999887544322111 0111 12444455555568888887654
Q ss_pred C
Q 011501 80 G 80 (484)
Q Consensus 80 ~ 80 (484)
.
T Consensus 76 ~ 76 (289)
T 3e48_A 76 I 76 (289)
T ss_dssp C
T ss_pred C
Confidence 3
No 396
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=95.36 E-value=0.0099 Score=59.08 Aligned_cols=90 Identities=13% Similarity=0.125 Sum_probs=53.2
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCC---cEEEE-eCC-hhHHHHHHHHhhhcCCCCeeecC-CHhHHHhhcCCCcEEEE
Q 011501 3 QTRIGLAG-LAVMGQNLALNIAEKGF---PISVY-NRT-TSKVDETVERAKQEGNLPLYGFH-DPESFVHSIQKPRVIIM 75 (484)
Q Consensus 3 ~~~IgiIG-lG~mG~~lA~~L~~~G~---~V~v~-dr~-~~~~~~~~~~~~~~~~~~~~~~~-s~~e~~~~l~~advIi~ 75 (484)
++||+|+| .|.+|..+.+.|.+.+| ++... +++ ..+.-.+. +. .+...+ ++++ .+. +|+||+
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~--g~-----~i~~~~~~~~~-~~~---~DvV~~ 74 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFA--ES-----SLRVGDVDSFD-FSS---VGLAFF 74 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEET--TE-----EEECEEGGGCC-GGG---CSEEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccC--Cc-----ceEEecCCHHH-hcC---CCEEEE
Confidence 47999999 89999999999987665 44444 432 11100000 00 111111 2222 233 999999
Q ss_pred ecCCCchHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 76 LVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 76 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
|+|.. ...+.+..+ +..|..+||.|...
T Consensus 75 a~g~~-~s~~~a~~~---~~aG~kvId~Sa~~ 102 (340)
T 2hjs_A 75 AAAAE-VSRAHAERA---RAAGCSVIDLSGAL 102 (340)
T ss_dssp CSCHH-HHHHHHHHH---HHTTCEEEETTCTT
T ss_pred cCCcH-HHHHHHHHH---HHCCCEEEEeCCCC
Confidence 99876 333333333 44678899998765
No 397
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=95.35 E-value=0.021 Score=59.07 Aligned_cols=108 Identities=13% Similarity=0.108 Sum_probs=73.9
Q ss_pred CCeEEEEccc----HHHHHHHHHHHhCC-CcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEec
Q 011501 3 QTRIGLAGLA----VMGQNLALNIAEKG-FPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLV 77 (484)
Q Consensus 3 ~~~IgiIGlG----~mG~~lA~~L~~~G-~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~v 77 (484)
..+|+|||.+ .+|..+.++|.+.| +.|+.+|+..+.+ . ++..+.|+.++.+. +|++++++
T Consensus 8 p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~~~~i-----~-------G~~~y~sl~~lp~~---~Dlavi~v 72 (457)
T 2csu_A 8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV-----Q-------GVKAYKSVKDIPDE---IDLAIIVV 72 (457)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE-----T-------TEECBSSTTSCSSC---CSEEEECS
T ss_pred CCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCCCCeE-----C-------CEeccCCHHHcCCC---CCEEEEec
Confidence 4579999998 88999999999985 6777777653221 0 36778888888765 99999999
Q ss_pred CCCchHHHHHHHHhhhcCCCCEEEecCCCCh-HH-----HHHHHHHHHHcCCeEEe
Q 011501 78 KAGSPVDQTIKTLSVYMEKGDCIIDGGNEWY-EN-----TERRQKAVAELGLLYLG 127 (484)
Q Consensus 78 p~~~~v~~vl~~l~~~l~~g~iiId~st~~~-~~-----~~~~~~~l~~~g~~~i~ 127 (484)
|.. .+.++++++...- -..+|+-.+.... .+ .+++.+.+++.|+.+++
T Consensus 73 p~~-~~~~~v~e~~~~G-i~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~viG 126 (457)
T 2csu_A 73 PKR-FVKDTLIQCGEKG-VKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRIIG 126 (457)
T ss_dssp CHH-HHHHHHHHHHHHT-CCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEEC
T ss_pred CHH-HHHHHHHHHHHcC-CCEEEEecCCCCccccccHHHHHHHHHHHHHcCCEEEc
Confidence 986 6777777766531 2234444433321 11 44556666777888774
No 398
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=95.35 E-value=0.21 Score=45.23 Aligned_cols=119 Identities=10% Similarity=0.072 Sum_probs=75.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCC-Ceee-cCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNL-PLYG-FHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~-~~~~-~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
.+|.-||+|. | .++..+++.+.+|+++|.+++.++.+.+.....+-. ++.. ..+..+........|+|++....
T Consensus 57 ~~vLDlGcG~-G-~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~-- 132 (204)
T 3njr_A 57 ELLWDIGGGS-G-SVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG-- 132 (204)
T ss_dssp CEEEEETCTT-C-HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC--
T ss_pred CEEEEecCCC-C-HHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc--
Confidence 4688899987 4 345556666899999999999887766543221100 1322 34555544444458999976532
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEec
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGM 128 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~ 128 (484)
..+ +++.+...+++|-.++-.+ ..+....+..+.+.+.|......
T Consensus 133 ~~~-~l~~~~~~LkpgG~lv~~~-~~~~~~~~~~~~l~~~g~~i~~i 177 (204)
T 3njr_A 133 SQA-LYDRLWEWLAPGTRIVANA-VTLESETLLTQLHARHGGQLLRI 177 (204)
T ss_dssp CHH-HHHHHHHHSCTTCEEEEEE-CSHHHHHHHHHHHHHHCSEEEEE
T ss_pred cHH-HHHHHHHhcCCCcEEEEEe-cCcccHHHHHHHHHhCCCcEEEE
Confidence 345 7888888888876555332 33466667777788877655443
No 399
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=95.35 E-value=0.012 Score=59.06 Aligned_cols=34 Identities=24% Similarity=0.609 Sum_probs=31.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChh
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTS 37 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~ 37 (484)
|||.|||.|..|..+|..|+++|++|+++++++.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 6999999999999999999999999999998754
No 400
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.34 E-value=0.057 Score=55.42 Aligned_cols=114 Identities=11% Similarity=0.062 Sum_probs=66.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHH--HHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEec--C
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKV--DETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLV--K 78 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~--~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~v--p 78 (484)
.++|.|||+|..|.+.|+.|++.|++|+++|...... ..+. .+. .+..-....+.++. +|.||++. |
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~-----~~~~g~~~~~~~~~---~d~vV~s~gi~ 75 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAV-----ERHTGSLNDEWLMA---ADLIVASPGIA 75 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTS-----CEEESSCCHHHHHT---CSEEEECTTSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCC-----EEEECCCcHHHhcc---CCEEEeCCCCC
Confidence 4689999999999999999999999999999765321 1122 221 22211222444444 89988873 3
Q ss_pred CCc-hHHHHH----------HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeE
Q 011501 79 AGS-PVDQTI----------KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLY 125 (484)
Q Consensus 79 ~~~-~v~~vl----------~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~ 125 (484)
... .+.... +-+...++...|-|-.|+++-.++.-+...+.+.|...
T Consensus 76 ~~~p~~~~a~~~~~~v~~~~~~~~~~~~~~vI~VTGTnGKTTT~~ml~~iL~~~g~~~ 133 (439)
T 2x5o_A 76 LAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNV 133 (439)
T ss_dssp TTCHHHHHHHHTTCEEECHHHHHHHHCCSCEEEEECSSSHHHHHHHHHHHHHHTTCCE
T ss_pred CCCHHHHHHHHCCCcEEEHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCCCE
Confidence 222 222111 11112233334445556666555555666777777554
No 401
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=95.33 E-value=0.053 Score=54.36 Aligned_cols=91 Identities=16% Similarity=0.236 Sum_probs=52.9
Q ss_pred CeEEEEc-ccHHHHHHHH-HHHhCCC---cEEEEeC-ChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEec
Q 011501 4 TRIGLAG-LAVMGQNLAL-NIAEKGF---PISVYNR-TTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLV 77 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~-~L~~~G~---~V~v~dr-~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~v 77 (484)
+||||+| .|.+|..+.+ .|.++++ .+..+.. +..+ .+...... ...+....+++++ +. +|+||.|+
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~--~v~~~~g~--~i~~~~~~~~~~~-~~---~DvVf~a~ 73 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ--AAPSFGGT--TGTLQDAFDLEAL-KA---LDIIVTCQ 73 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS--BCCGGGTC--CCBCEETTCHHHH-HT---CSEEEECS
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCC--CccccCCC--ceEEEecCChHHh-cC---CCEEEECC
Confidence 6999999 9999999999 5666665 3344433 2211 11000000 1112222345554 44 99999999
Q ss_pred CCCchHHHHHHHHhhhcCCCC--EEEecCCC
Q 011501 78 KAGSPVDQTIKTLSVYMEKGD--CIIDGGNE 106 (484)
Q Consensus 78 p~~~~v~~vl~~l~~~l~~g~--iiId~st~ 106 (484)
|.. ...+....+. ..|. +|||.|+.
T Consensus 74 g~~-~s~~~a~~~~---~~G~k~vVID~ss~ 100 (367)
T 1t4b_A 74 GGD-YTNEIYPKLR---ESGWQGYWIDAASS 100 (367)
T ss_dssp CHH-HHHHHHHHHH---HTTCCCEEEECSST
T ss_pred Cch-hHHHHHHHHH---HCCCCEEEEcCChh
Confidence 875 3344444443 3454 99999876
No 402
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=95.31 E-value=0.023 Score=57.06 Aligned_cols=100 Identities=13% Similarity=0.088 Sum_probs=67.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCCh-------hHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEE
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTT-------SKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIM 75 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~-------~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~ 75 (484)
.||-|+|.|..|.++|+.+...|. +|+++|++. +.+..+.+......+ ......+++|+++. +|++|=
T Consensus 189 ~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~-~~~~~~~L~eav~~---ADV~IG 264 (398)
T 2a9f_A 189 VSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTN-REFKSGTLEDALEG---ADIFIG 264 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHS-CTTCCCSCSHHHHT---TCSEEE
T ss_pred cEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccC-cccchhhHHHHhcc---CCEEEe
Confidence 589999999999999999999998 999999873 222222221111000 01124578888887 998877
Q ss_pred ecCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHH
Q 011501 76 LVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENT 111 (484)
Q Consensus 76 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~ 111 (484)
+..++...++ +...+.++.+|+++||-.|+.+
T Consensus 265 ~Sapgl~T~E----mVk~Ma~~pIIfalsNPt~E~~ 296 (398)
T 2a9f_A 265 VSAPGVLKAE----WISKMAARPVIFAMANPIPEIY 296 (398)
T ss_dssp CCSTTCCCHH----HHHTSCSSCEEEECCSSSCSSC
T ss_pred cCCCCCCCHH----HHHhhCCCCEEEECCCCCccCC
Confidence 7554433344 4455668999999999876444
No 403
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.27 E-value=0.036 Score=53.26 Aligned_cols=71 Identities=15% Similarity=0.201 Sum_probs=47.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCC-CcEEEEeCChhHHH--HHHHHhhhcCCCCeee--cCCHhHHHhhcCCCcEEEEe
Q 011501 3 QTRIGLAGL-AVMGQNLALNIAEKG-FPISVYNRTTSKVD--ETVERAKQEGNLPLYG--FHDPESFVHSIQKPRVIIML 76 (484)
Q Consensus 3 ~~~IgiIGl-G~mG~~lA~~L~~~G-~~V~v~dr~~~~~~--~~~~~~~~~~~~~~~~--~~s~~e~~~~l~~advIi~~ 76 (484)
+++|.|.|. |.+|..++..|++.| ++|.+.+|++++.. .+...+. .+.. ..+++.+.+.++.+|+||.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~-----~~~~~D~~d~~~l~~~~~~~d~vi~~ 79 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGA-----EVVQGDQDDQVIMELALNGAYATFIV 79 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTC-----EEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCC-----EEEEecCCCHHHHHHHHhcCCEEEEe
Confidence 468999987 999999999999998 99999999987542 2222111 0111 12444444444558888887
Q ss_pred cC
Q 011501 77 VK 78 (484)
Q Consensus 77 vp 78 (484)
..
T Consensus 80 a~ 81 (299)
T 2wm3_A 80 TN 81 (299)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 404
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=95.26 E-value=0.051 Score=51.36 Aligned_cols=80 Identities=9% Similarity=0.105 Sum_probs=51.5
Q ss_pred eEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 5 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 5 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
+|-|-| .+-+|.++|+.|++.|++|.+.||++++.+++.+++.+ +..+-.=+.+.+++
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~---------------------~~~~~~Dv~~~~~v 62 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPN---------------------LFYFHGDVADPLTL 62 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTT---------------------EEEEECCTTSHHHH
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCC---------------------EEEEEecCCCHHHH
Confidence 344445 57799999999999999999999998877665543211 11111123344456
Q ss_pred HHHHHHHhhhcCCCCEEEecCC
Q 011501 84 DQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 84 ~~vl~~l~~~l~~g~iiId~st 105 (484)
+.+++++.....+=+++|+...
T Consensus 63 ~~~v~~~~~~~g~iDiLVNNAG 84 (247)
T 3ged_A 63 KKFVEYAMEKLQRIDVLVNNAC 84 (247)
T ss_dssp HHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHcCCCCEEEECCC
Confidence 6666666665555567777543
No 405
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=95.23 E-value=0.067 Score=56.72 Aligned_cols=96 Identities=13% Similarity=0.116 Sum_probs=61.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHH-hhhcCCCCeeecCCHhHHHhh--cCCCcEEEEecCCC
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVER-AKQEGNLPLYGFHDPESFVHS--IQKPRVIIMLVKAG 80 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~-~~~~~~~~~~~~~s~~e~~~~--l~~advIi~~vp~~ 80 (484)
++|-|+|.|.+|..++..|.+.|++|.+.|.++++++.+.+. +.. -+.+..+-++..+. ++++|.+++ ++++
T Consensus 128 ~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~----~i~Gd~~~~~~L~~a~i~~a~~vi~-t~~D 202 (565)
T 4gx0_A 128 GHILIFGIDPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFK----VVYGSPTDAHVLAGLRVAAARSIIA-NLSD 202 (565)
T ss_dssp SCEEEESCCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSE----EEESCTTCHHHHHHTTGGGCSEEEE-CSCH
T ss_pred CeEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCe----EEEeCCCCHHHHHhcCcccCCEEEE-eCCc
Confidence 469999999999999999999999999999999998887765 321 12222233333332 456999987 4443
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCC
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st 105 (484)
.....+-..+..+..-.+|.-..+
T Consensus 203 -~~n~~~~~~ar~~~~~~iiar~~~ 226 (565)
T 4gx0_A 203 -PDNANLCLTVRSLCQTPIIAVVKE 226 (565)
T ss_dssp -HHHHHHHHHHHTTCCCCEEEECSS
T ss_pred -HHHHHHHHHHHHhcCceEEEEECC
Confidence 333222223333444455554443
No 406
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=95.21 E-value=0.053 Score=51.46 Aligned_cols=82 Identities=11% Similarity=0.160 Sum_probs=56.8
Q ss_pred eEEEE--cccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEE--ecCCC
Q 011501 5 RIGLA--GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIM--LVKAG 80 (484)
Q Consensus 5 ~IgiI--GlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~--~vp~~ 80 (484)
|+.+| |.+-+|.++|+.|++.|.+|.++||++++++++.++....+ .+++.+ =+.+.
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g-------------------~~~~~~~~Dvt~~ 68 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG-------------------KEVLGVKADVSKK 68 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------------CCEEEEECCTTSH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC-------------------CcEEEEEccCCCH
Confidence 66676 45679999999999999999999999998877765432210 222222 23455
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCC
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st 105 (484)
++++.+++++.....+=+++|+...
T Consensus 69 ~~v~~~~~~~~~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 69 KDVEEFVRRTFETYSRIDVLCNNAG 93 (254)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCc
Confidence 5677777777666555578887654
No 407
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=95.18 E-value=0.051 Score=51.63 Aligned_cols=82 Identities=15% Similarity=0.181 Sum_probs=56.2
Q ss_pred eEEEE--cccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEe--cCCC
Q 011501 5 RIGLA--GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIML--VKAG 80 (484)
Q Consensus 5 ~IgiI--GlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~--vp~~ 80 (484)
|+.+| |.+-+|.++|+.|++.|.+|.+.||++++.++..++....+ .++..+. +.+.
T Consensus 10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g-------------------~~~~~~~~Dv~~~ 70 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG-------------------YDAHGVAFDVTDE 70 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT-------------------CCEEECCCCTTCH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------------CcEEEEEeeCCCH
Confidence 78888 56789999999999999999999999988777665432211 1222111 2344
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCC
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st 105 (484)
++++.+++++.....+=+++|+...
T Consensus 71 ~~v~~~~~~~~~~~G~iDiLVNNAG 95 (255)
T 4g81_D 71 LAIEAAFSKLDAEGIHVDILINNAG 95 (255)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCC
T ss_pred HHHHHHHHHHHHHCCCCcEEEECCC
Confidence 5667777777766555577777644
No 408
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=95.15 E-value=0.047 Score=57.45 Aligned_cols=125 Identities=8% Similarity=0.078 Sum_probs=73.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhh-cCCCCeeecCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQ-EGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~-~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
.+|.|||+|..|..++.+|+..|. +++++|.+.=....+..+.-- ....+-.-+....+.+..+ .+++-+.+.+.
T Consensus 33 ~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~l-Np~v~v~~~~~-- 109 (531)
T 1tt5_A 33 AHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQEL-NSDVSGSFVEE-- 109 (531)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGBTSBHHHHHHHHHHTT-CTTSBCCEESS--
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhcCcHHHHHHHHHHHHh-CCCCeEEEeCC--
Confidence 589999999999999999999998 799999876544455432110 0000000011122223322 24554555544
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCC
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSG 132 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~g 132 (484)
.+...++.....+..=++||+++- .+..-..+.+.+...++.++.+.+.|
T Consensus 110 ~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~ln~~c~~~~iplI~~~~~G 159 (531)
T 1tt5_A 110 SPENLLDNDPSFFCRFTVVVATQL-PESTSLRLADVLWNSQIPLLICRTYG 159 (531)
T ss_dssp CHHHHHHSCGGGGGGCSEEEEESC-CHHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred CcchhhhhhHHHhcCCCEEEEeCC-CHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 244433323344555689999854 44444556667777888888876554
No 409
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.15 E-value=0.097 Score=51.71 Aligned_cols=124 Identities=13% Similarity=0.026 Sum_probs=66.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhh-cCCCCeeecCCHhHHHhhcCCCcEEEEecCCC-
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQ-EGNLPLYGFHDPESFVHSIQKPRVIIMLVKAG- 80 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~-~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~- 80 (484)
.+|.|||+|..|..+|.+|+..|. +++++|.+.-....+..+..- ....+..-+....+.+..+ .+++-+...+..
T Consensus 35 ~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~i-nP~v~v~~~~~~i 113 (340)
T 3rui_A 35 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRI-FPLMDATGVKLSI 113 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHH-CTTCEEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHh-CCCCEEEEEeccc
Confidence 589999999999999999999997 788999875222222111000 0000000011122222222 145555554321
Q ss_pred --------ch--HHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 81 --------SP--VDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 81 --------~~--v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
.. ...-.+.+...+.+-++|+|++-... .-..+.+.+...++.++.+.
T Consensus 114 ~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~-tR~lin~~c~~~~~plI~aa 171 (340)
T 3rui_A 114 PMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRE-SRWLPSLLSNIENKTVINAA 171 (340)
T ss_dssp CCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTG-GGHHHHHHHHHTTCEEEEEE
T ss_pred cccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHH-HHHHHHHHHHHcCCcEEEee
Confidence 00 01111223334455689999877653 33445566677888888763
No 410
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=95.13 E-value=0.014 Score=56.50 Aligned_cols=70 Identities=13% Similarity=0.197 Sum_probs=44.3
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCC
Q 011501 3 QTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKA 79 (484)
Q Consensus 3 ~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~ 79 (484)
+|+|.|.| .|.+|..++..|++.|++|++.+|++...+ +. ... -+...-+.+++.+.++++|+||-+...
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~--~~~----~~~~Dl~~~~~~~~~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN--DYE----YRVSDYTLEDLINQLNDVDAVVHLAAT 72 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCE----EEECCCCHHHHHHHTTTCSEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC--ceE----EEEccccHHHHHHhhcCCCEEEEcccc
Confidence 46899998 699999999999999999999999955433 22 100 011111133333334458888877643
No 411
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=95.11 E-value=0.074 Score=51.00 Aligned_cols=80 Identities=13% Similarity=0.143 Sum_probs=52.2
Q ss_pred eEEEE-c-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 5 RIGLA-G-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 5 ~IgiI-G-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
|+++| | .+-+|.++|+.|++.|.+|.+.+|+.+++++..++... . +-.+-.=+.+.++
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~-----------------~---~~~~~~Dv~~~~~ 89 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGG-----------------G---AVGIQADSANLAE 89 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCT-----------------T---CEEEECCTTCHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC-----------------C---eEEEEecCCCHHH
Confidence 67777 4 56799999999999999999999999988776554311 0 1111122334445
Q ss_pred HHHHHHHHhhhcCCCCEEEecC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGG 104 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~s 104 (484)
++.+++++.....+=+++|+..
T Consensus 90 v~~~~~~~~~~~G~iDiLVNNA 111 (273)
T 4fgs_A 90 LDRLYEKVKAEAGRIDVLFVNA 111 (273)
T ss_dssp HHHHHHHHHHHHSCEEEEEECC
T ss_pred HHHHHHHHHHHcCCCCEEEECC
Confidence 6666666665443335666654
No 412
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.08 E-value=0.13 Score=49.92 Aligned_cols=42 Identities=14% Similarity=0.287 Sum_probs=36.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHH
Q 011501 3 QTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 44 (484)
Q Consensus 3 ~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~ 44 (484)
.++|.|.|. |.+|..++..|++.|++|++.+|++++.+.+.+
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~ 53 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQK 53 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHH
Confidence 368999986 999999999999999999999999887655543
No 413
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=95.04 E-value=0.073 Score=50.29 Aligned_cols=85 Identities=14% Similarity=0.125 Sum_probs=56.3
Q ss_pred CeEEEEcc-c-HHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEE--ecCC
Q 011501 4 TRIGLAGL-A-VMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIM--LVKA 79 (484)
Q Consensus 4 ~~IgiIGl-G-~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~--~vp~ 79 (484)
+++-|.|. | -+|..+|+.|+++|++|++.+|+.++.++..++.... ...++.++ =+.+
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------------------~~~~~~~~~~Dl~~ 84 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL------------------GLGRVEAVVCDVTS 84 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT------------------CSSCEEEEECCTTC
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc------------------CCCceEEEEeCCCC
Confidence 45777788 7 4999999999999999999999998877665533210 00223332 2334
Q ss_pred CchHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 80 GSPVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
.+.++.+++.+.....+=+++|++...
T Consensus 85 ~~~v~~~~~~~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 85 TEAVDALITQTVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHhCCCcEEEECCCc
Confidence 445666666666555455777776554
No 414
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=95.03 E-value=0.12 Score=53.44 Aligned_cols=114 Identities=13% Similarity=0.217 Sum_probs=76.6
Q ss_pred CeEEEEcccH----------HHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhh----------hcCCCCeeecCCHhHH
Q 011501 4 TRIGLAGLAV----------MGQNLALNIAEKGFPISVYNRTTSKVDETVERAK----------QEGNLPLYGFHDPESF 63 (484)
Q Consensus 4 ~~IgiIGlG~----------mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~----------~~~~~~~~~~~s~~e~ 63 (484)
++|+|+|+.. -...++..|.+.|.+|.+||+.-...+ +..... .. ++..+.++.+.
T Consensus 330 ~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 405 (467)
T 2q3e_A 330 KKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQ-IVVDLSHPGVSEDDQVSR---LVTISKDPYEA 405 (467)
T ss_dssp CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHH-HHHHHCC------CHHHH---HEEECSSHHHH
T ss_pred CEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHH-HhhhhccccccccccccC---ceeecCCHHHH
Confidence 5899999875 788999999999999999998633211 111100 00 14566788888
Q ss_pred HhhcCCCcEEEEecCCCchHHH-HHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 64 VHSIQKPRVIIMLVKAGSPVDQ-TIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 64 ~~~l~~advIi~~vp~~~~v~~-vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
++. +|.|++++..+ +.+. -.+.+...+....+|+|+-+.... ..+.+.+.|+.|.+.+
T Consensus 406 ~~~---ad~~vi~t~~~-~f~~~~~~~~~~~~~~~~~i~D~r~~~~~----~~~~~~~~g~~~~~ig 464 (467)
T 2q3e_A 406 CDG---AHAVVICTEWD-MFKELDYERIHKKMLKPAFIFDGRRVLDG----LHNELQTIGFQIETIG 464 (467)
T ss_dssp HTT---CSEEEECSCCG-GGGGSCHHHHHHHSCSSCEEEESSCTTTT----CHHHHHHHTCEEEETT
T ss_pred HhC---CcEEEEecCCh-hhhcCCHHHHHHhcCCCCEEEeCCCcCCc----hHHHHHhcCcEEEEeC
Confidence 776 99999999886 3332 134555556555669999888643 1234456688887654
No 415
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=95.02 E-value=0.05 Score=53.50 Aligned_cols=36 Identities=11% Similarity=0.130 Sum_probs=32.1
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChh
Q 011501 2 VQTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTS 37 (484)
Q Consensus 2 ~~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~ 37 (484)
++|+|.|.| .|.+|..++..|++.|++|++.+|++.
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 457899998 599999999999999999999999654
No 416
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=94.97 E-value=0.079 Score=49.95 Aligned_cols=40 Identities=20% Similarity=0.238 Sum_probs=33.7
Q ss_pred eEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHH
Q 011501 5 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 44 (484)
Q Consensus 5 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~ 44 (484)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+
T Consensus 10 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~ 50 (255)
T 4eso_A 10 KAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIRE 50 (255)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 455565 5889999999999999999999999988776654
No 417
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=94.96 E-value=0.12 Score=48.51 Aligned_cols=81 Identities=12% Similarity=0.165 Sum_probs=53.2
Q ss_pred EEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchHH
Q 011501 6 IGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVD 84 (484)
Q Consensus 6 IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v~ 84 (484)
+-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+.... . ...+-.=+.+.+.++
T Consensus 12 ~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~---~~~~~~Dv~d~~~v~ 71 (248)
T 3op4_A 12 ALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-----------------N---GKGMALNVTNPESIE 71 (248)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG-----------------G---EEEEECCTTCHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-----------------c---ceEEEEeCCCHHHHH
Confidence 44445 58899999999999999999999998887766543211 0 112222233444566
Q ss_pred HHHHHHhhhcCCCCEEEecCCC
Q 011501 85 QTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 85 ~vl~~l~~~l~~g~iiId~st~ 106 (484)
.+++++.....+=+++|++...
T Consensus 72 ~~~~~~~~~~g~iD~lv~nAg~ 93 (248)
T 3op4_A 72 AVLKAITDEFGGVDILVNNAGI 93 (248)
T ss_dssp HHHHHHHHHHCCCSEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 6666666555455777776554
No 418
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=94.96 E-value=0.08 Score=50.19 Aligned_cols=69 Identities=12% Similarity=0.252 Sum_probs=47.7
Q ss_pred eEEEEcc-cHHHHHHHHHHHhC--CCcEEEEeCChhHHHHHHHHhhhcCCCCeee--cCCHhHHHhhcCCCcEEEEecC
Q 011501 5 RIGLAGL-AVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKQEGNLPLYG--FHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 5 ~IgiIGl-G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~--~~s~~e~~~~l~~advIi~~vp 78 (484)
+|.|.|. |.+|..++..|++. |++|.+.+|++++.+.+...+. .+.. ..+.+++.+.++.+|+||.+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~-----~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGI-----TVRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTC-----EEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCC-----eEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 4788886 99999999999998 9999999999877655443211 0111 1244445444556888887754
No 419
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.93 E-value=0.06 Score=53.26 Aligned_cols=43 Identities=12% Similarity=0.109 Sum_probs=37.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHh
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERA 46 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~ 46 (484)
.+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.+
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~G 212 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVG 212 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhC
Confidence 369999999999999999888999 9999999998877766544
No 420
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.92 E-value=0.049 Score=56.10 Aligned_cols=109 Identities=13% Similarity=0.269 Sum_probs=76.0
Q ss_pred CeEEEEccc----------HHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEE
Q 011501 4 TRIGLAGLA----------VMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVI 73 (484)
Q Consensus 4 ~~IgiIGlG----------~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advI 73 (484)
++|+|+|+. .=...++..|.+.|.+|.+||+.... ....... ++..+.++++.++. +|.|
T Consensus 323 ~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~~--~~~~~~~-----~~~~~~~~~~~~~~---ad~v 392 (446)
T 4a7p_A 323 KTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGVE--QASKMLT-----DVEFVENPYAAADG---ADAL 392 (446)
T ss_dssp CEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCHH--HHGGGCS-----SCCBCSCHHHHHTT---BSEE
T ss_pred CEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCCH--hHHHhcC-----CceEecChhHHhcC---CCEE
Confidence 589999987 56789999999999999999987532 2221111 35667888888887 9999
Q ss_pred EEecCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 74 IMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 74 i~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
++++..++.-.--.+.+...+ ++.+|+|+-+.... +.+.+.|+.|.+.+
T Consensus 393 vi~t~~~~f~~~d~~~~~~~~-~~~~i~D~r~~~~~------~~~~~~g~~y~~iG 441 (446)
T 4a7p_A 393 VIVTEWDAFRALDLTRIKNSL-KSPVLVDLRNIYPP------AELERAGLQYTGVG 441 (446)
T ss_dssp EECSCCTTTTSCCHHHHHTTB-SSCBEECSSCCSCH------HHHHHTTCBCCCSS
T ss_pred EEeeCCHHhhcCCHHHHHHhc-CCCEEEECCCCCCH------HHHHhcCCEEEEec
Confidence 999987642111124455545 35689999998743 23456788876554
No 421
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=94.90 E-value=0.031 Score=54.70 Aligned_cols=71 Identities=13% Similarity=0.210 Sum_probs=46.1
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeee--cCCHhHHHhhcCCCcEEEEecC
Q 011501 3 QTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYG--FHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 3 ~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~--~~s~~e~~~~l~~advIi~~vp 78 (484)
+|+|.|.| .|.+|..++..|++.|++|++.+|++++.+.+..... .+.. ..+.+++.+.++++|+||-+..
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~-----~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEP-----ECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCC-----EEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCe-----EEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 36899998 5999999999999999999999998775443321110 0111 1234444444445788877653
No 422
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=94.90 E-value=0.07 Score=50.41 Aligned_cols=86 Identities=20% Similarity=0.350 Sum_probs=53.2
Q ss_pred CCCCeEEEE-c-ccHHHHHHHHHHHhCCCcEEEE-eCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEE--
Q 011501 1 MVQTRIGLA-G-LAVMGQNLALNIAEKGFPISVY-NRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIM-- 75 (484)
Q Consensus 1 M~~~~IgiI-G-lG~mG~~lA~~L~~~G~~V~v~-dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~-- 75 (484)
|+..|+.+| | .|-+|..+|+.|++.|++|.+. +|+.++.+++.+..... . .++.++
T Consensus 1 M~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~ 61 (258)
T 3oid_A 1 MEQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL----------------G---VKVLVVKA 61 (258)
T ss_dssp --CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT----------------T---CCEEEEEC
T ss_pred CCCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc----------------C---CcEEEEEc
Confidence 544454444 5 6889999999999999999885 99988776665432210 0 223322
Q ss_pred ecCCCchHHHHHHHHhhhcCCCCEEEecCC
Q 011501 76 LVKAGSPVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 76 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st 105 (484)
=+.+.+.++.+++.+.....+=+++|++..
T Consensus 62 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg 91 (258)
T 3oid_A 62 NVGQPAKIKEMFQQIDETFGRLDVFVNNAA 91 (258)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 233444566666666655545577777654
No 423
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=94.89 E-value=0.088 Score=51.97 Aligned_cols=42 Identities=21% Similarity=0.313 Sum_probs=36.2
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhC-CC-cEEEEeCChhHHHHHHH
Q 011501 3 QTRIGLAG-LAVMGQNLALNIAEK-GF-PISVYNRTTSKVDETVE 44 (484)
Q Consensus 3 ~~~IgiIG-lG~mG~~lA~~L~~~-G~-~V~v~dr~~~~~~~~~~ 44 (484)
.++|-|.| .|.+|..++..|++. |+ +|.+++|++.+...+.+
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~ 65 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAM 65 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHH
Confidence 36899998 599999999999999 97 99999999887766554
No 424
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=94.88 E-value=0.11 Score=52.00 Aligned_cols=41 Identities=15% Similarity=0.300 Sum_probs=29.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhCC---CcEEEE-eC-ChhHHHHHHH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKG---FPISVY-NR-TTSKVDETVE 44 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G---~~V~v~-dr-~~~~~~~~~~ 44 (484)
+||||+|.|.+|..+.+.|.+++ ++|... |+ +++....+.+
T Consensus 3 ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~ 48 (380)
T 2d2i_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLE 48 (380)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHH
T ss_pred cEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhc
Confidence 59999999999999999998873 565544 44 4454444443
No 425
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=94.87 E-value=0.11 Score=51.27 Aligned_cols=40 Identities=13% Similarity=0.277 Sum_probs=29.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhCC---CcEEEE-eC-ChhHHHHHH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKG---FPISVY-NR-TTSKVDETV 43 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G---~~V~v~-dr-~~~~~~~~~ 43 (484)
.||||+|.|.+|..+.+.|.+++ ++|... |+ +++....+.
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~ 47 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLL 47 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHH
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHh
Confidence 59999999999999999999873 565544 54 555444444
No 426
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=94.81 E-value=0.43 Score=45.72 Aligned_cols=103 Identities=11% Similarity=0.108 Sum_probs=71.5
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHccCCCCCCcccch
Q 011501 321 VDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDP 400 (484)
Q Consensus 321 ~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~Gcii~s~ll~~i~~~~~~~~~~~~ll~~~ 400 (484)
.+++...|.+.|++.+..+..+.|++.+.++. + ++..++.+.+..+. ..|+.+........++.-....-
T Consensus 168 ~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~----G--~~~~~~~~~~~~~~-~~s~~~~~~~~~~l~~~~~~g~~--- 237 (299)
T 1vpd_A 168 IGAGNVTKLANQVIVALNIAAMSEALTLATKA----G--VNPDLVYQAIRGGL-AGSTVLDAKAPMVMDRNFKPGFR--- 237 (299)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----T--CCHHHHHHHHTTST-TCCHHHHHHHHHHHTTCCCCSSB---
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----C--CCHHHHHHHHHccC-CCCHHHHHhhhHhhcCCCCCCCC---
Confidence 36788899999999999999999999987653 3 89999999998873 45666554333222221111110
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011501 401 EFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLAYFD 438 (484)
Q Consensus 401 ~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~~~~ 438 (484)
.+ .....++.++..|-+.|+|+|...+....+.
T Consensus 238 -~~----~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~ 270 (299)
T 1vpd_A 238 -ID----LHIKDLANALDTSHGVGAQLPLTAAVMEMMQ 270 (299)
T ss_dssp -HH----HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred -hH----HHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 11 1112457899999999999999988877554
No 427
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=94.78 E-value=0.047 Score=55.44 Aligned_cols=174 Identities=11% Similarity=0.119 Sum_probs=101.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcE-EEEeCC----------hhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcE
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPI-SVYNRT----------TSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRV 72 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V-~v~dr~----------~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~adv 72 (484)
++|.|-|.|++|...|+.|.+.|.+| .+.|.+ .+.+.++.+....-.++..+ .-+.+++... .||+
T Consensus 222 ~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~-~~~~~~i~~~--~~DI 298 (424)
T 3k92_A 222 ARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTD-VITNEELLEK--DCDI 298 (424)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSC-CBCHHHHHHS--CCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcE-EecCccceec--cccE
Confidence 57999999999999999999999986 567776 44444443221100000011 1245565543 4999
Q ss_pred EEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEecc--CCCCHHhhhcCCccccCCCHH
Q 011501 73 IIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMG--VSGGEEGARYGPSLMPGGSFE 150 (484)
Q Consensus 73 Ii~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p--v~gg~~~a~~g~~i~~gg~~~ 150 (484)
.+-|-....-..+ -.+.+ +-++|+...|.. .+.+..+.+.++|+.|+..- -.||.. -.
T Consensus 299 liPcA~~n~I~~~----~a~~l-~ak~V~EgAN~p--~t~eA~~iL~~rGI~~~PD~~aNAGGV~-------------vS 358 (424)
T 3k92_A 299 LVPAAISNQITAK----NAHNI-QASIVVERANGP--TTIDATKILNERGVLLVPDILASAGGVT-------------VS 358 (424)
T ss_dssp EEECSCSSCBCTT----TGGGC-CCSEEECCSSSC--BCHHHHHHHHHTTCEEECHHHHTTHHHH-------------HH
T ss_pred EeecCcccccChh----hHhhc-CceEEEcCCCCC--CCHHHHHHHHHCCCEEECchHhcCCCEE-------------ee
Confidence 9988765532222 22334 567888888886 34666788899999887532 222221 12
Q ss_pred HHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHH
Q 011501 151 AYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQV 221 (484)
Q Consensus 151 ~~~~v~~ll~~i~~~~~~~~~~~~~~G~~g~g~~~K~v~N~i~~~~~~~~~Ea~~l~~~~g~~~~~~i~~~ 221 (484)
.+|.++.. ..- .+ . ..-+..-+...+...+.+.+..+++.+ +++.+...+
T Consensus 359 ~~E~~qn~----~~~--------~w-~-------~eeV~~~l~~~m~~~~~~v~~~a~~~~-~~~~~aA~~ 408 (424)
T 3k92_A 359 YFEWVQNN----QGY--------YW-S-------EEEVAEKLRSVMVSSFETIYQTAATHK-VDMRLAAYM 408 (424)
T ss_dssp HHHHHHHH----HTC--------CC-C-------HHHHHHHHHHHHHHHHHHHHHHHHHHT-CCHHHHHHH
T ss_pred hhHHHhcc----ccc--------CC-C-------HHHHHHHHHHHHHHHHHHHHHHHHHhC-cCHHHHHHH
Confidence 33333222 110 11 0 123444455555566677888888887 887765544
No 428
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.76 E-value=0.19 Score=49.98 Aligned_cols=124 Identities=9% Similarity=0.094 Sum_probs=67.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhhh-cCCCCeeecCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKQ-EGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~~-~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
.+|.|||+|..|..++.+|+..|. +++++|.+.-....+..+..- ....+..-.....+.+..+ .+++-+...+..-
T Consensus 119 ~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~v~v~~~~~~i 197 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKR-NSEISVSEIALNI 197 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH-CTTSEEEEEECCC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHH-CCCCeEEEeeccc
Confidence 589999999999999999999997 799999875322222211000 0000000011111212211 1444444443321
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCCC
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSG 132 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~g 132 (484)
.-.. .+.. +..-++|||++-.....-..+.+.+.+.++.++.+.+.|
T Consensus 198 ~~~~---~~~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~~~~g 244 (353)
T 3h5n_A 198 NDYT---DLHK-VPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGYVN 244 (353)
T ss_dssp CSGG---GGGG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEEEEET
T ss_pred Cchh---hhhH-hccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 1000 1223 556789999875543244445566777888888776543
No 429
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=94.75 E-value=0.1 Score=48.70 Aligned_cols=87 Identities=23% Similarity=0.358 Sum_probs=53.5
Q ss_pred CCCCeEEEE-c-ccHHHHHHHHHHHhCCCcEEEEeC-ChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEe-
Q 011501 1 MVQTRIGLA-G-LAVMGQNLALNIAEKGFPISVYNR-TTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIML- 76 (484)
Q Consensus 1 M~~~~IgiI-G-lG~mG~~lA~~L~~~G~~V~v~dr-~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~- 76 (484)
|.+.|+.+| | .|-+|..+|+.|++.|++|.+.++ ++++.+++.+..... . .++.++.
T Consensus 1 Ml~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~----------------~---~~~~~~~~ 61 (246)
T 3osu_A 1 MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK----------------G---VDSFAIQA 61 (246)
T ss_dssp CCCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----------------T---SCEEEEEC
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc----------------C---CcEEEEEc
Confidence 544455555 4 688999999999999999998876 555555544332110 1 2333332
Q ss_pred -cCCCchHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 77 -VKAGSPVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 77 -vp~~~~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
+.+.+.++.+++++.....+=+++|++...
T Consensus 62 Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~ 92 (246)
T 3osu_A 62 NVADADEVKAMIKEVVSQFGSLDVLVNNAGI 92 (246)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred cCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 334445666666666555555788877654
No 430
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=94.74 E-value=0.099 Score=48.89 Aligned_cols=84 Identities=12% Similarity=0.101 Sum_probs=55.6
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEe--cCCC
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIML--VKAG 80 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~--vp~~ 80 (484)
+++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.++.... . .++.++. +.+.
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~D~~~~ 70 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD----------------G---GTAISVAVDVSDP 70 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------T---CEEEEEECCTTSH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc----------------C---CcEEEEEccCCCH
Confidence 3456666 488999999999999999999999998877766543210 1 2233322 2333
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
+.++.+++.+.....+=+++|++...
T Consensus 71 ~~~~~~~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 71 ESAKAMADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 45566666666555555778877654
No 431
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=94.73 E-value=0.11 Score=48.69 Aligned_cols=41 Identities=17% Similarity=0.202 Sum_probs=34.0
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHH
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 44 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~ 44 (484)
++|-|.| .|.+|..+++.|+++|++|.+.+|++++.+.+.+
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 55 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVE 55 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 3566775 5899999999999999999999999877665543
No 432
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=94.73 E-value=0.25 Score=44.36 Aligned_cols=116 Identities=8% Similarity=0.021 Sum_probs=74.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhCC--CcEEEEeCChhHHHHHHHHhhhcCCCCeee-cCCHhHHHhhcCCCcEEEEecCCC
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKG--FPISVYNRTTSKVDETVERAKQEGNLPLYG-FHDPESFVHSIQKPRVIIMLVKAG 80 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G--~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~-~~s~~e~~~~l~~advIi~~vp~~ 80 (484)
.+|--||+|. |. ++..+++.+ .+|+++|.+++.++.+.+.....+-.++.. ..+..+....+...|+|++..+..
T Consensus 42 ~~vLDiG~G~-G~-~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~ 119 (204)
T 3e05_A 42 LVMWDIGAGS-AS-VSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGG 119 (204)
T ss_dssp CEEEEETCTT-CH-HHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCCTT
T ss_pred CEEEEECCCC-CH-HHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCCCc
Confidence 4688899986 44 445555555 789999999998877765432211002322 233333333334589999876654
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCC
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGL 123 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~ 123 (484)
....+++.+...+++|..++-... ......+..+.+.+.|+
T Consensus 120 -~~~~~l~~~~~~LkpgG~l~~~~~-~~~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 120 -MLEEIIDAVDRRLKSEGVIVLNAV-TLDTLTKAVEFLEDHGY 160 (204)
T ss_dssp -CHHHHHHHHHHHCCTTCEEEEEEC-BHHHHHHHHHHHHHTTC
T ss_pred -CHHHHHHHHHHhcCCCeEEEEEec-ccccHHHHHHHHHHCCC
Confidence 678888999888888776654332 23455666777788885
No 433
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=94.70 E-value=0.17 Score=47.40 Aligned_cols=86 Identities=15% Similarity=0.234 Sum_probs=55.2
Q ss_pred eEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEec--CCCc
Q 011501 5 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLV--KAGS 81 (484)
Q Consensus 5 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~v--p~~~ 81 (484)
.+-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+.... ... ..+..+..-+ .+..
T Consensus 14 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~--~~~~~~~~D~~~~~~~ 77 (252)
T 3f1l_A 14 IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINE--------------ETG--RQPQWFILDLLTCTSE 77 (252)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--------------HHS--CCCEEEECCTTTCCHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--------------hcC--CCceEEEEecccCCHH
Confidence 455555 57899999999999999999999999887766543211 000 0123333333 3344
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
.++.+++.+.....+=+++|++...
T Consensus 78 ~~~~~~~~~~~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 78 NCQQLAQRIAVNYPRLDGVLHNAGL 102 (252)
T ss_dssp HHHHHHHHHHHHCSCCSEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCCEEEECCcc
Confidence 5666666666655555778876554
No 434
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=94.69 E-value=0.086 Score=49.77 Aligned_cols=83 Identities=8% Similarity=0.084 Sum_probs=53.7
Q ss_pred eEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEE--ecCCCc
Q 011501 5 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIM--LVKAGS 81 (484)
Q Consensus 5 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~--~vp~~~ 81 (484)
+|-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.++ =+.+..
T Consensus 31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~D~~~~~ 91 (262)
T 3rkr_A 31 VAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA----------------G---GEAESHACDLSHSD 91 (262)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------T---CEEEEEECCTTCHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh----------------C---CceeEEEecCCCHH
Confidence 455666 589999999999999999999999998877665533210 0 222222 233334
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
.++.+++.+.....+=+++|++...
T Consensus 92 ~v~~~~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 92 AIAAFATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCc
Confidence 5556666665544455677776554
No 435
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=94.69 E-value=0.069 Score=50.33 Aligned_cols=83 Identities=18% Similarity=0.307 Sum_probs=54.7
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEE--ecCCC
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIM--LVKAG 80 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~--~vp~~ 80 (484)
+++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.++ =+.+.
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~Dv~~~ 67 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF----------------P---GQILTVQMDVRNT 67 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS----------------T---TCEEEEECCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------C---CcEEEEEccCCCH
Confidence 3455555 588999999999999999999999998877766533110 0 122222 23344
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCC
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st 105 (484)
+.++.+++.+.....+=+++|++..
T Consensus 68 ~~v~~~~~~~~~~~g~id~lv~nAg 92 (257)
T 3imf_A 68 DDIQKMIEQIDEKFGRIDILINNAA 92 (257)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCC
Confidence 4566666666655545577887655
No 436
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=94.67 E-value=0.11 Score=51.38 Aligned_cols=97 Identities=9% Similarity=0.202 Sum_probs=54.6
Q ss_pred CeEEEEcccHHHHHHHHHHHh---C-CCcEEEE-eC-ChhHHHHHHHHhhhcCCC----------------Ceeec--CC
Q 011501 4 TRIGLAGLAVMGQNLALNIAE---K-GFPISVY-NR-TTSKVDETVERAKQEGNL----------------PLYGF--HD 59 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~---~-G~~V~v~-dr-~~~~~~~~~~~~~~~~~~----------------~~~~~--~s 59 (484)
.||||+|.|.+|..+.+.|.+ + .++|... |+ +++....+.+.....|.+ .+... .+
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~d 82 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHERS 82 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEEecCC
Confidence 599999999999999999988 5 4566544 44 445444444311000000 11221 24
Q ss_pred HhHHH-hhcCCCcEEEEecCCCchHHHHHHHHhhhcCCC--CEEEecCC
Q 011501 60 PESFV-HSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKG--DCIIDGGN 105 (484)
Q Consensus 60 ~~e~~-~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g--~iiId~st 105 (484)
++++. .. ..+|+||.|+|.....+. .... +..| .+|||.+.
T Consensus 83 p~~l~~~~-~~vDvV~e~tg~~~s~e~-a~~~---l~~GakkVVId~~a 126 (339)
T 2x5j_O 83 LQSLPWRE-LGVDVVLDCTGVYGSREH-GEAH---IAAGAKKVLFSHPG 126 (339)
T ss_dssp GGGCCHHH-HTCSEEEECSSSCCSHHH-HHHH---HHTTCSEEEESSCC
T ss_pred hHHCcccc-cCCCEEEECCCccccHHH-HHHH---HHcCCCEEEEeccc
Confidence 44431 10 038999999988754333 3332 3334 36888765
No 437
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=94.67 E-value=0.023 Score=57.28 Aligned_cols=83 Identities=10% Similarity=0.120 Sum_probs=59.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCC---cEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecC
Q 011501 3 QTRIGLAGL-AVMGQNLALNIAEKGF---PISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 3 ~~~IgiIGl-G~mG~~lA~~L~~~G~---~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp 78 (484)
..||-|||. |+.|.+-+..+...|. .|+++|+++... +. . .+++. . +|+||-|+.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~------g~-----~------~~~i~-~---aDivIn~vl 272 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSR------GG-----P------FDEIP-Q---ADIFINCIY 272 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTT------CS-----C------CTHHH-H---SSEEEECCC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccccc------CC-----c------hhhHh-h---CCEEEECcC
Confidence 358999999 9999999999999998 999999886221 11 1 13433 4 999999998
Q ss_pred CCchHHHHH-HHHhhhc-CCCCEEEecCCC
Q 011501 79 AGSPVDQTI-KTLSVYM-EKGDCIIDGGNE 106 (484)
Q Consensus 79 ~~~~v~~vl-~~l~~~l-~~g~iiId~st~ 106 (484)
-+...-.++ ++.+..+ ++|.+|||.+.-
T Consensus 273 ig~~aP~Lvt~e~v~~m~k~gsVIVDVA~D 302 (394)
T 2qrj_A 273 LSKPIAPFTNMEKLNNPNRRLRTVVDVSAD 302 (394)
T ss_dssp CCSSCCCSCCHHHHCCTTCCCCEEEETTCC
T ss_pred cCCCCCcccCHHHHhcCcCCCeEEEEEecC
Confidence 532221222 4555667 899999999754
No 438
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.67 E-value=0.079 Score=52.87 Aligned_cols=95 Identities=20% Similarity=0.202 Sum_probs=57.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
.+|.|+|.|.+|...++.+...|.+|++.++++++.+.+.+..... .+.-..+.+.+.+.....|+||-++.....+
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~---~v~~~~~~~~~~~~~~~~D~vid~~g~~~~~ 265 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGAD---SFLVSRDQEQMQAAAGTLDGIIDTVSAVHPL 265 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCS---EEEETTCHHHHHHTTTCEEEEEECCSSCCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCc---eEEeccCHHHHHHhhCCCCEEEECCCcHHHH
Confidence 4699999999999999999999999999999998877665322110 0111222222222122467777777654333
Q ss_pred HHHHHHHhhhcCCCCEEEecCC
Q 011501 84 DQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 84 ~~vl~~l~~~l~~g~iiId~st 105 (484)
+..+ +.+.++-.++..+.
T Consensus 266 ~~~~----~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 266 LPLF----GLLKSHGKLILVGA 283 (366)
T ss_dssp HHHH----HHEEEEEEEEECCC
T ss_pred HHHH----HHHhcCCEEEEEcc
Confidence 4333 33334444555443
No 439
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=94.67 E-value=0.14 Score=51.35 Aligned_cols=104 Identities=14% Similarity=0.131 Sum_probs=59.4
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCC--c---EEEEeCChhH----HHHHHHHhhhcC-CC--CeeecCCHhHHHhhcCCC
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGF--P---ISVYNRTTSK----VDETVERAKQEG-NL--PLYGFHDPESFVHSIQKP 70 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~--~---V~v~dr~~~~----~~~~~~~~~~~~-~~--~~~~~~s~~e~~~~l~~a 70 (484)
+||+||| .|.+|.+++..|+..+. + +.++|.+.+. ++...-...... .+ ++...++..+..+. +
T Consensus 33 ~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~~d---a 109 (375)
T 7mdh_A 33 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFED---V 109 (375)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTT---C
T ss_pred CEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHhCC---C
Confidence 5899999 79999999999998765 2 7776544332 222221111100 00 23445555555555 9
Q ss_pred cEEEEecCCC----ch-----------HHHHHHHHhhhcCCCCEEEecCCCChHHHH
Q 011501 71 RVIIMLVKAG----SP-----------VDQTIKTLSVYMEKGDCIIDGGNEWYENTE 112 (484)
Q Consensus 71 dvIi~~vp~~----~~-----------v~~vl~~l~~~l~~g~iiId~st~~~~~~~ 112 (484)
|+||++--.+ .. ++++...+..+..++.+|+..|| |-++.
T Consensus 110 DvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN--PvD~~ 164 (375)
T 7mdh_A 110 DWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN--PCNTN 164 (375)
T ss_dssp SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS--SHHHH
T ss_pred CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC--chhHH
Confidence 9999975322 11 22222344454456778887776 44543
No 440
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=94.66 E-value=0.12 Score=48.95 Aligned_cols=84 Identities=11% Similarity=0.141 Sum_probs=54.3
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEE--ecCCC
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIM--LVKAG 80 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~--~vp~~ 80 (484)
++|-|.| .|.+|..++..|++.|++|++.+|++++.+++.++.... . .++.++ =+.+.
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~---~~~~~~~~Dl~~~ 92 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL----------------G---AKVHTFVVDCSNR 92 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------T---CCEEEEECCTTCH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc----------------C---CeEEEEEeeCCCH
Confidence 4577776 589999999999999999999999988766654432110 0 222222 22333
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
+.++.+++.+.....+=++||++...
T Consensus 93 ~~v~~~~~~~~~~~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 93 EDIYSSAKKVKAEIGDVSILVNNAGV 118 (272)
T ss_dssp HHHHHHHHHHHHHTCCCSEEEECCCC
T ss_pred HHHHHHHHHHHHHCCCCcEEEECCCc
Confidence 45556666665555455778877654
No 441
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=94.62 E-value=0.09 Score=49.21 Aligned_cols=81 Identities=9% Similarity=0.103 Sum_probs=52.1
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+.... ...+..=+.+.+.
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---------------------~~~~~~Dv~~~~~ 61 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPN---------------------LFYFHGDVADPLT 61 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTT---------------------EEEEECCTTSHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc---------------------CCeEEeeCCCHHH
Confidence 3566665 57899999999999999999999998877665432110 1112222233445
Q ss_pred HHHHHHHHhhhcCCCCEEEecCC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st 105 (484)
++.+++++.....+=+++|++..
T Consensus 62 v~~~~~~~~~~~g~id~lv~nAg 84 (247)
T 3dii_A 62 LKKFVEYAMEKLQRIDVLVNNAC 84 (247)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCC
Confidence 66666666555545567777654
No 442
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=94.62 E-value=0.19 Score=49.91 Aligned_cols=118 Identities=13% Similarity=0.129 Sum_probs=72.4
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhC-CCcEEE--EeCChhHHHHHHHHhhhcCCCCeeec---CC--------------
Q 011501 1 MVQTRIGLAG-LAVMGQNLALNIAEK-GFPISV--YNRTTSKVDETVERAKQEGNLPLYGF---HD-------------- 59 (484)
Q Consensus 1 M~~~~IgiIG-lG~mG~~lA~~L~~~-G~~V~v--~dr~~~~~~~~~~~~~~~~~~~~~~~---~s-------------- 59 (484)
|.+++|+|+| +|.+|..-...+.++ .++|.. .++|.+++.+...+... +.... .+
T Consensus 1 M~~k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~~n~~~l~~q~~~f~p----~~v~v~~~~~~~~~l~~~~~G~~~ 76 (376)
T 3a06_A 1 MEERTLVILGATGSIGTQTLDVLKKVKGIRLIGISFHSNLELAFKIVKEFNV----KNVAITGDVEFEDSSINVWKGSHS 76 (376)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEESSCHHHHHHHHHHHTC----CEEEECSSCCCCCSSSEEEESTTH
T ss_pred CCcceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEccCCHHHHHHHHHHcCC----CEEEEccHHHHHHHHHHHccCHHH
Confidence 5556899999 699999988888887 567664 57998887776654421 11111 11
Q ss_pred HhHHHhhcCCCcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCChH-HHHHHHHHHHHcCCeEEe
Q 011501 60 PESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYE-NTERRQKAVAELGLLYLG 127 (484)
Q Consensus 60 ~~e~~~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~-~~~~~~~~l~~~g~~~i~ 127 (484)
+.+++.. ..+|+|+.+++....+...+..+. .|+.|.-.....-- .-..+.+.+++.|..++.
T Consensus 77 l~el~~~-~~~D~Vv~AivG~aGL~ptlaAi~----aGK~vaLANKEsLV~aG~li~~~a~~~g~~llP 140 (376)
T 3a06_A 77 IEEMLEA-LKPDITMVAVSGFSGLRAVLASLE----HSKRVCLANKESLVCGGFLVKKKLKEKGTELIP 140 (376)
T ss_dssp HHHHHHH-HCCSEEEECCCSTTHHHHHHHHHH----HCSEEEECCSHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred HHHHhcC-CCCCEEEEEeeCHHHHHHHHHHHH----CCCEEEEeChHHHHhhHHHHHHHHHHcCCEEEE
Confidence 2455532 348999999999888777765553 45666554432111 112234444556776653
No 443
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=94.62 E-value=0.089 Score=49.07 Aligned_cols=41 Identities=20% Similarity=0.313 Sum_probs=34.2
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHH
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 44 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~ 44 (484)
++|-|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 53 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVD 53 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 4566666 5899999999999999999999999887665544
No 444
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=94.60 E-value=0.15 Score=47.78 Aligned_cols=83 Identities=12% Similarity=0.206 Sum_probs=53.5
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++-|.|. |-+|..+|+.|++.|++|++.+|++++.+++.++... . ...+..=+.+.+.
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~---~~~~~~D~~~~~~ 69 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGD-----------------A---ALAVAADISKEAD 69 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCT-----------------T---EEEEECCTTSHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCC-----------------c---eEEEEecCCCHHH
Confidence 35666764 7899999999999999999999999887776543210 0 1122222333345
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
++.+++.+.....+=+++|++...
T Consensus 70 ~~~~~~~~~~~~g~id~li~~Ag~ 93 (261)
T 3n74_A 70 VDAAVEAALSKFGKVDILVNNAGI 93 (261)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCcc
Confidence 556666665544445677776543
No 445
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=94.57 E-value=0.12 Score=54.71 Aligned_cols=124 Identities=15% Similarity=0.040 Sum_probs=66.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHhh-hcCCCCeeecCCHhHHHhhcCCCcEEEEecCCC-
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAK-QEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAG- 80 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~~-~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~- 80 (484)
.+|.|||+|..|..+|.+|+..|. +++++|.+.=....+..+.. .....+..-+....+.+..+ .+++-+...+..
T Consensus 327 arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~i-NP~V~v~~~~~~I 405 (615)
T 4gsl_A 327 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRI-FPLMDATGVKLSI 405 (615)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHH-CTTCEEEEECCCC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhh-CCCcEEEEeeccc
Confidence 589999999999999999999997 79999987522222211100 00000000011122222222 155555554321
Q ss_pred --------chHHHHH--HHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 81 --------SPVDQTI--KTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 81 --------~~v~~vl--~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
...+..+ +.+...+..-++|||++-.. ..-..+...+...++-++.+.
T Consensus 406 pm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~-~tR~~ln~~c~~~~~PlI~aa 463 (615)
T 4gsl_A 406 PMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSR-ESRWLPSLLSNIENKTVINAA 463 (615)
T ss_dssp CCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSG-GGTHHHHHHHHHTTCEEEEEE
T ss_pred cccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCH-HHHHHHHHHHHHcCCeEEEEE
Confidence 0101111 22333344568999987664 333345566677788888763
No 446
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=94.56 E-value=0.13 Score=49.00 Aligned_cols=85 Identities=15% Similarity=0.202 Sum_probs=55.1
Q ss_pred eEEEE-c-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 5 RIGLA-G-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 5 ~IgiI-G-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
|+.+| | .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... -.. ...+..=+.+...
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~---~~~~~~Dv~d~~~ 91 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA--------------GLE---GRGAVLNVNDATA 91 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--------------TCC---CEEEECCTTCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--------------CCc---EEEEEEeCCCHHH
Confidence 45555 4 588999999999999999999999988877665432210 001 2233333444455
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
++.+++++.....+=+++|++...
T Consensus 92 v~~~~~~~~~~~g~iD~lvnnAg~ 115 (270)
T 3ftp_A 92 VDALVESTLKEFGALNVLVNNAGI 115 (270)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 666666666555455777776543
No 447
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=94.55 E-value=0.16 Score=47.23 Aligned_cols=86 Identities=15% Similarity=0.212 Sum_probs=54.4
Q ss_pred eEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEec--CCCc
Q 011501 5 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLV--KAGS 81 (484)
Q Consensus 5 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~v--p~~~ 81 (484)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.++.... -. ....++..-+ .+..
T Consensus 16 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~--~~~~~~~~d~d~~~~~ 79 (247)
T 3i1j_A 16 VILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSA--------------GQ--PQPLIIALNLENATAQ 79 (247)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--------------TS--CCCEEEECCTTTCCHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc--------------CC--CCceEEEeccccCCHH
Confidence 455556 588999999999999999999999998877765543211 00 0022222222 3334
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
.++.+++.+.....+=+++|++...
T Consensus 80 ~~~~~~~~~~~~~g~id~lv~nAg~ 104 (247)
T 3i1j_A 80 QYRELAARVEHEFGRLDGLLHNASI 104 (247)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCCEEEECCcc
Confidence 5556666665555455777776554
No 448
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=94.54 E-value=0.12 Score=48.12 Aligned_cols=84 Identities=10% Similarity=0.075 Sum_probs=55.7
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEE--ecCCC
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIM--LVKAG 80 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~--~vp~~ 80 (484)
+++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.++ =+.+.
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~D~~~~ 66 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK----------------G---FKARGLVLNISDI 66 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT----------------T---CCEEEEECCTTCH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------C---CceEEEEecCCCH
Confidence 3455565 588999999999999999999999998877665433210 0 222222 23344
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
+.++.+++++.....+=+++|++...
T Consensus 67 ~~~~~~~~~~~~~~~~id~li~~Ag~ 92 (247)
T 3lyl_A 67 ESIQNFFAEIKAENLAIDILVNNAGI 92 (247)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 45666666666655455788877654
No 449
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=94.53 E-value=0.05 Score=51.74 Aligned_cols=70 Identities=14% Similarity=0.256 Sum_probs=48.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhC--CCcEEEEeCChhHHHHHHHHhhhcCCCCeee--cCCHhHHHhhcCCCcEEEEecC
Q 011501 4 TRIGLAGL-AVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKQEGNLPLYG--FHDPESFVHSIQKPRVIIMLVK 78 (484)
Q Consensus 4 ~~IgiIGl-G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~--~~s~~e~~~~l~~advIi~~vp 78 (484)
|+|.|.|. |.+|..++..|++. |++|.+.+|++++.+.+...+. .+.. ..+.+++.+.++++|+||.+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~-----~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 75 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGV-----EVRHGDYNQPESLQKAFAGVSKLLFISG 75 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTC-----EEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCC-----eEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence 46889986 99999999999998 9999999999877665543211 0111 1244444444555888887654
No 450
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=94.52 E-value=0.17 Score=47.52 Aligned_cols=85 Identities=9% Similarity=0.053 Sum_probs=53.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCC
Q 011501 2 VQTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAG 80 (484)
Q Consensus 2 ~~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~ 80 (484)
..+++-|.|. |-+|..+|+.|++.|++|.+.+|++++.+++.++.. .. ...+..=+.+.
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~D~~~~ 63 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG-----------------DA---ARYQHLDVTIE 63 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG-----------------GG---EEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----------------Cc---eeEEEecCCCH
Confidence 3346777765 899999999999999999999999887665543210 01 11222222333
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
+.++.+++.+.....+=+++|++...
T Consensus 64 ~~~~~~~~~~~~~~g~iD~lv~nAg~ 89 (254)
T 1hdc_A 64 EDWQRVVAYAREEFGSVDGLVNNAGI 89 (254)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 45556666555544444677776543
No 451
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=94.52 E-value=0.18 Score=47.34 Aligned_cols=83 Identities=11% Similarity=0.150 Sum_probs=53.8
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++-|.| .|-+|..+|+.|++.|++|.+.+|+.++.+++.+.... . ...+-.=+.+.+.
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~---~~~~~~D~~~~~~ 68 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGP-----------------A---AYAVQMDVTRQDS 68 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCT-----------------T---EEEEECCTTCHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC-----------------C---ceEEEeeCCCHHH
Confidence 3466666 58899999999999999999999998887665543210 0 1112222333345
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
++.+++++.....+=+++|++...
T Consensus 69 v~~~~~~~~~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 69 IDAAIAATVEHAGGLDILVNNAAL 92 (259)
T ss_dssp HHHHHHHHHHHSSSCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCc
Confidence 566666666555555777776554
No 452
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.52 E-value=0.28 Score=48.51 Aligned_cols=43 Identities=14% Similarity=0.220 Sum_probs=36.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHh
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERA 46 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~ 46 (484)
.+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.+
T Consensus 173 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG 216 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIG 216 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhC
Confidence 479999999999999888888898 8999999998877665443
No 453
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=94.50 E-value=0.052 Score=52.10 Aligned_cols=82 Identities=13% Similarity=0.129 Sum_probs=52.6
Q ss_pred EEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEe--cCCCch
Q 011501 6 IGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIML--VKAGSP 82 (484)
Q Consensus 6 IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~--vp~~~~ 82 (484)
+-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.++. +.+.+.
T Consensus 11 vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~Dv~~~~~ 71 (280)
T 3tox_A 11 AIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG----------------G---GEAAALAGDVGDEAL 71 (280)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT----------------T---CCEEECCCCTTCHHH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------------C---CcEEEEECCCCCHHH
Confidence 44445 588999999999999999999999998877766543210 0 2222221 233345
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
++.+++.+.....+=+++|++...
T Consensus 72 v~~~~~~~~~~~g~iD~lvnnAg~ 95 (280)
T 3tox_A 72 HEALVELAVRRFGGLDTAFNNAGA 95 (280)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 556666665554455777776553
No 454
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=94.48 E-value=0.14 Score=47.12 Aligned_cols=40 Identities=15% Similarity=0.320 Sum_probs=33.5
Q ss_pred eEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHH
Q 011501 5 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 44 (484)
Q Consensus 5 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~ 44 (484)
+|-|.| .|.+|..+++.|++.|++|.+.+|++++.+.+.+
T Consensus 7 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 47 (234)
T 2ehd_A 7 AVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAA 47 (234)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 466665 6899999999999999999999999887665543
No 455
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=94.48 E-value=0.072 Score=49.16 Aligned_cols=41 Identities=22% Similarity=0.272 Sum_probs=34.4
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHH
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 44 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~ 44 (484)
++|-|.| .|-+|..+|+.|+++|++|.+.+|++++.+++.+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 43 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTN 43 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 3566776 4789999999999999999999999988777654
No 456
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.46 E-value=0.16 Score=52.42 Aligned_cols=99 Identities=15% Similarity=0.244 Sum_probs=67.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHh--hcCCCcEEEEecCCCc
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVH--SIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~--~l~~advIi~~vp~~~ 81 (484)
.+|-|+|.|.+|..+|+.|. .+++|.+.++++++++.+.+...+. .-+.+..+..++.. .++.+|+++.++.++
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~-~~~~v~iIE~d~~r~~~la~~l~~~--~Vi~GD~td~~~L~ee~i~~~D~~ia~T~~D- 311 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLE-QTYSVKLIERNLQRAEKLSEELENT--IVFCGDAADQELLTEENIDQVDVFIALTNED- 311 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHT-TTSEEEEEESCHHHHHHHHHHCTTS--EEEESCTTCHHHHHHTTGGGCSEEEECCSCH-
T ss_pred cEEEEEcchHHHHHHHHHhh-hcCceEEEecCHHHHHHHHHHCCCc--eEEeccccchhhHhhcCchhhcEEEEcccCc-
Confidence 57999999999999999985 5699999999999999988765421 00122233344443 345699998888765
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
...-+..-++..+...++|.-..+.
T Consensus 312 e~Ni~~~llAk~~gv~kvIa~vn~~ 336 (461)
T 4g65_A 312 ETNIMSAMLAKRMGAKKVMVLIQRG 336 (461)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSCH
T ss_pred HHHHHHHHHHHHcCCcccccccccc
Confidence 4444445555556666666655543
No 457
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=94.45 E-value=0.2 Score=48.40 Aligned_cols=106 Identities=19% Similarity=0.088 Sum_probs=72.5
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHcCCCccchhhHHHHHHHHccCCC-CCCcccc
Q 011501 321 VDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPD-LANVLVD 399 (484)
Q Consensus 321 ~~~~~~v~~v~nai~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~Gcii~s~ll~~i~~~~~~~~~-~~~ll~~ 399 (484)
.+.++.+|.+.|.+....+..+.|++.+.++. ++|..++.++++.+. ..|+.++.... .+. ..+.+++
T Consensus 166 ~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~------G~~~~~~~~~~~~~~-~~s~~~~~~~~----~~g~~~~~~~~ 234 (302)
T 2h78_A 166 DGAGQVAKVCNNQLLAVLMIGTAEAMALGVAN------GLEAKVLAEIMRRSS-GGNWALEVYNP----WPGVMENAPAS 234 (302)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCCHHHHHHHHHTST-TCCHHHHHCCC----STTTSTTSGGG
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHHcCC-CCCHHHHHhCC----CcccccccccC
Confidence 46788999999999999999999999987753 399999999999874 56666543311 000 0011111
Q ss_pred ----hhHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011501 400 ----PEFAKEIIERQSAWRRVVCLAINSGISTPGMSSSLAYFDT 439 (484)
Q Consensus 400 ----~~~~~~~~~~~~~~~~~v~~a~~~g~p~p~~~~al~~~~~ 439 (484)
+-|.- .-...+++.++..|-+.|+|+|....+...|..
T Consensus 235 ~~~~~g~~~--~~~~kD~~~~~~~a~~~g~~~p~~~~~~~~~~~ 276 (302)
T 2h78_A 235 RDYSGGFMA--QLMAKDLGLAQEAAQASASSTPMGSLALSLYRL 276 (302)
T ss_dssp GTTCSSSBH--HHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred CCCCCCCcH--HHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 11211 112234567889999999999999988876553
No 458
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=94.44 E-value=0.14 Score=47.81 Aligned_cols=83 Identities=14% Similarity=0.218 Sum_probs=52.4
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEe--cCCC
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIML--VKAG 80 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~--vp~~ 80 (484)
+++-|.| .|-+|..+|+.|+++|++|.+.+|++++.+++.++.... . .++.++. +.+.
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~---~~~~~~~~Dv~~~ 68 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA----------------G---AKVHVLELDVADR 68 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------T---CCEEEEECCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------------C---CcEEEEECCCCCH
Confidence 3566665 588999999999999999999999988776655432110 0 2222222 2333
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCC
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st 105 (484)
+.++.+++.+.....+=+++|++..
T Consensus 69 ~~~~~~~~~~~~~~g~id~lv~nAg 93 (247)
T 2jah_A 69 QGVDAAVASTVEALGGLDILVNNAG 93 (247)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCC
Confidence 4555556555554444467777654
No 459
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=94.42 E-value=0.02 Score=53.15 Aligned_cols=37 Identities=19% Similarity=0.315 Sum_probs=32.7
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCC--cEEEEeCChhHH
Q 011501 3 QTRIGLAG-LAVMGQNLALNIAEKGF--PISVYNRTTSKV 39 (484)
Q Consensus 3 ~~~IgiIG-lG~mG~~lA~~L~~~G~--~V~v~dr~~~~~ 39 (484)
.++|.|.| .|.+|..++..|++.|+ +|.+.+|++++.
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~ 57 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTF 57 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCC
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCc
Confidence 46799998 69999999999999999 999999987653
No 460
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.41 E-value=0.066 Score=48.18 Aligned_cols=40 Identities=13% Similarity=0.017 Sum_probs=34.4
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHH
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETV 43 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~ 43 (484)
.+|.|+| .|.+|..+++.+...|.+|++.++++++.+.+.
T Consensus 40 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 40 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS 80 (198)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH
T ss_pred CEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 4688999 699999999999999999999999988765543
No 461
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=94.37 E-value=0.12 Score=49.03 Aligned_cols=84 Identities=13% Similarity=0.215 Sum_probs=52.5
Q ss_pred CeEEEE-c-ccHHHHHHHHHHHhCCCcEEEE-eCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEe--cC
Q 011501 4 TRIGLA-G-LAVMGQNLALNIAEKGFPISVY-NRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIML--VK 78 (484)
Q Consensus 4 ~~IgiI-G-lG~mG~~lA~~L~~~G~~V~v~-dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~--vp 78 (484)
.|+.+| | .|-+|..+|+.|++.|++|.+. +|+++..+.+.+..... . .++.++. +.
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~----------------~---~~~~~~~~Dl~ 86 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES----------------G---GEAVAIPGDVG 86 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----------------T---CEEEEEECCTT
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc----------------C---CcEEEEEcCCC
Confidence 345555 4 6889999999999999999775 88887766655432110 0 2333332 23
Q ss_pred CCchHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 79 AGSPVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 79 ~~~~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
+.+.++.+++.+.....+=+++|++...
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~li~nAg~ 114 (272)
T 4e3z_A 87 NAADIAAMFSAVDRQFGRLDGLVNNAGI 114 (272)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCCC
Confidence 3345666666666555455777776553
No 462
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.36 E-value=0.23 Score=50.24 Aligned_cols=43 Identities=9% Similarity=0.105 Sum_probs=36.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHh
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERA 46 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~~~~~~ 46 (484)
.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+.+.+
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lG 258 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELG 258 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcC
Confidence 369999999999999888888999 8999999999887666544
No 463
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=94.35 E-value=0.1 Score=51.13 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=30.8
Q ss_pred CC-CCeEEEEc-ccHHHHHHHHHHHhC--CCcEEEEeCCh
Q 011501 1 MV-QTRIGLAG-LAVMGQNLALNIAEK--GFPISVYNRTT 36 (484)
Q Consensus 1 M~-~~~IgiIG-lG~mG~~lA~~L~~~--G~~V~v~dr~~ 36 (484)
|+ ||+|.|.| .|.+|..++..|++. |++|++.+|++
T Consensus 1 Ms~m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 40 (348)
T 1oc2_A 1 MSQFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLT 40 (348)
T ss_dssp --CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCC
T ss_pred CCcCcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 65 57899998 699999999999998 89999999875
No 464
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=94.34 E-value=0.14 Score=48.37 Aligned_cols=82 Identities=16% Similarity=0.302 Sum_probs=54.8
Q ss_pred eEEEEcc-cHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEE--ecCCCc
Q 011501 5 RIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIM--LVKAGS 81 (484)
Q Consensus 5 ~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~--~vp~~~ 81 (484)
.+-|.|. |-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.++ =+.+.+
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~Dv~~~~ 73 (264)
T 3ucx_A 13 VVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT----------------G---RRALSVGTDITDDA 73 (264)
T ss_dssp EEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------T---CCEEEEECCTTCHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc----------------C---CcEEEEEcCCCCHH
Confidence 4556664 77999999999999999999999998877765533210 0 223332 233444
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCC
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st 105 (484)
.++.+++++.....+=+++|++..
T Consensus 74 ~v~~~~~~~~~~~g~id~lv~nAg 97 (264)
T 3ucx_A 74 QVAHLVDETMKAYGRVDVVINNAF 97 (264)
T ss_dssp HHHHHHHHHHHHTSCCSEEEECCC
T ss_pred HHHHHHHHHHHHcCCCcEEEECCC
Confidence 566666666665555577887653
No 465
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=94.32 E-value=0.1 Score=49.03 Aligned_cols=83 Identities=8% Similarity=0.031 Sum_probs=49.4
Q ss_pred eEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 5 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 5 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
.+-|.| .|-+|..+|+.|++.|++|.+.+|++++.++..++. -.. ...+..=+.+.+.+
T Consensus 9 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----------------~~~---~~~~~~Dv~~~~~v 68 (257)
T 3tpc_A 9 VFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----------------GAA---VRFRNADVTNEADA 68 (257)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------------------------CEEEECCTTCHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----------------CCc---eEEEEccCCCHHHH
Confidence 355555 588999999999999999999999987765443211 011 22333333444556
Q ss_pred HHHHHHHhhhcCCCCEEEecCCCC
Q 011501 84 DQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 84 ~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
+.+++.+.....+=+++|++....
T Consensus 69 ~~~~~~~~~~~g~id~lv~nAg~~ 92 (257)
T 3tpc_A 69 TAALAFAKQEFGHVHGLVNCAGTA 92 (257)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 666666665554557788776543
No 466
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=94.32 E-value=0.15 Score=48.71 Aligned_cols=86 Identities=16% Similarity=0.139 Sum_probs=55.5
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.++.... -.. ...+-.=+.+.+.
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~---~~~~~~Dl~d~~~ 95 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--------------GGK---ALPIRCDVTQPDQ 95 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--------------TCC---CEEEECCTTCHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--------------CCe---EEEEEcCCCCHHH
Confidence 3455666 588999999999999999999999988877665533210 000 2222222344445
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
++.+++++.....+=+++|++...
T Consensus 96 v~~~~~~~~~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 96 VRGMLDQMTGELGGIDIAVCNAGI 119 (276)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 666666666555455777776554
No 467
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=94.32 E-value=0.12 Score=48.67 Aligned_cols=86 Identities=12% Similarity=0.095 Sum_probs=52.9
Q ss_pred CeEEEEc-ccHHHHHHHHHHHh-CCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCc
Q 011501 4 TRIGLAG-LAVMGQNLALNIAE-KGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGS 81 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~-~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~ 81 (484)
++|-|.| .|.+|..+++.|++ .|++|++.+|++++.+.+.+..... -.. ..++..=+.+..
T Consensus 5 k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~--------------~~~---~~~~~~Dl~~~~ 67 (276)
T 1wma_A 5 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--------------GLS---PRFHQLDIDDLQ 67 (276)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--------------TCC---CEEEECCTTCHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc--------------CCe---eEEEECCCCCHH
Confidence 4565665 68999999999999 9999999999988766654432110 001 222322233334
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
.++.+++.+.....+=++||++...
T Consensus 68 ~~~~~~~~~~~~~g~id~li~~Ag~ 92 (276)
T 1wma_A 68 SIRALRDFLRKEYGGLDVLVNNAGI 92 (276)
T ss_dssp HHHHHHHHHHHHHSSEEEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCcc
Confidence 5556666555444344677776543
No 468
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=94.31 E-value=0.11 Score=48.03 Aligned_cols=41 Identities=17% Similarity=0.233 Sum_probs=35.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHH
Q 011501 4 TRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 44 (484)
Q Consensus 4 ~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~ 44 (484)
++|-|.|. |.+|..+++.|++.|++|++.+|++++.+++.+
T Consensus 8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (244)
T 1cyd_A 8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK 49 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 56777875 899999999999999999999999887665543
No 469
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.30 E-value=0.081 Score=52.30 Aligned_cols=91 Identities=16% Similarity=0.214 Sum_probs=64.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCchH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPV 83 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~v 83 (484)
.+|.|+|+|.+|...++.+...|.+|++.++++++.+.+.+.+.. ... .+.+++.+ ..|+||-++.....+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~-----~v~-~~~~~~~~---~~D~vid~~g~~~~~ 248 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVK-----HFY-TDPKQCKE---ELDFIISTIPTHYDL 248 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCS-----EEE-SSGGGCCS---CEEEEEECCCSCCCH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCC-----eec-CCHHHHhc---CCCEEEECCCcHHHH
Confidence 479999999999999988888999999999999998877665532 122 44443333 489999998776444
Q ss_pred HHHHHHHhhhcCCCCEEEecCCCC
Q 011501 84 DQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 84 ~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
.. ....+.++-.++..+...
T Consensus 249 ~~----~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 249 KD----YLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp HH----HHTTEEEEEEEEECCCCC
T ss_pred HH----HHHHHhcCCEEEEECCCC
Confidence 43 345555666666665543
No 470
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=94.30 E-value=0.14 Score=48.03 Aligned_cols=82 Identities=13% Similarity=0.225 Sum_probs=52.1
Q ss_pred eEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEE--ecCCCc
Q 011501 5 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIM--LVKAGS 81 (484)
Q Consensus 5 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~--~vp~~~ 81 (484)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.++ =+.+.+
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~D~~~~~ 64 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA----------------G---GHAVAVKVDVSDRD 64 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------T---CCEEEEECCTTSHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------C---CcEEEEEecCCCHH
Confidence 466665 688999999999999999999999988766654432110 0 122222 223334
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCC
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGN 105 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st 105 (484)
.++.+++++.....+=+++|++..
T Consensus 65 ~v~~~~~~~~~~~g~id~lv~nAg 88 (256)
T 1geg_A 65 QVFAAVEQARKTLGGFDVIVNNAG 88 (256)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCC
Confidence 555666665554444477777654
No 471
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=94.27 E-value=0.22 Score=46.91 Aligned_cols=83 Identities=8% Similarity=0.066 Sum_probs=52.5
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
++|-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+... .. ...+..=+.+.+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~D~~~~~~ 67 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----------------DA---ARYVHLDVTQPAQ 67 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-----------------GG---EEEEECCTTCHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----------------cC---ceEEEecCCCHHH
Confidence 3566666 5889999999999999999999999887665543211 00 1122222233345
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
++.+++.+.....+=+++|++...
T Consensus 68 v~~~~~~~~~~~g~iD~lv~~Ag~ 91 (260)
T 1nff_A 68 WKAAVDTAVTAFGGLHVLVNNAGI 91 (260)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 556666555544444677776543
No 472
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=94.23 E-value=0.12 Score=47.88 Aligned_cols=41 Identities=20% Similarity=0.332 Sum_probs=34.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHH
Q 011501 4 TRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 44 (484)
Q Consensus 4 ~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~ 44 (484)
++|-|.|. |.+|..+++.|++.|++|.+.+|++++.+++.+
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVR 49 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45777775 899999999999999999999999887766544
No 473
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=94.23 E-value=0.17 Score=48.15 Aligned_cols=40 Identities=18% Similarity=0.300 Sum_probs=33.2
Q ss_pred eEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHH
Q 011501 5 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 44 (484)
Q Consensus 5 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~ 44 (484)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+
T Consensus 24 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 64 (277)
T 2rhc_B 24 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLK 64 (277)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 455565 6889999999999999999999999887665544
No 474
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=94.22 E-value=0.2 Score=46.85 Aligned_cols=41 Identities=17% Similarity=0.295 Sum_probs=34.6
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHH
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 44 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~ 44 (484)
++|-|.| .|.+|..+++.|++.|++|++.+|++++.+++.+
T Consensus 8 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (264)
T 2pd6_A 8 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVR 49 (264)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Confidence 4566775 5899999999999999999999999887766554
No 475
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=94.22 E-value=0.25 Score=45.99 Aligned_cols=40 Identities=15% Similarity=0.297 Sum_probs=33.5
Q ss_pred eEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHH
Q 011501 5 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 44 (484)
Q Consensus 5 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~ 44 (484)
+|-|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+
T Consensus 13 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 53 (254)
T 2wsb_A 13 CAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQ 53 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 466665 5899999999999999999999999887665543
No 476
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=94.20 E-value=0.17 Score=49.93 Aligned_cols=97 Identities=13% Similarity=0.214 Sum_probs=55.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhC---CCcEEEE-eC-ChhHHHHHHHHhhhcCCC----------------Ceeec--CCH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEK---GFPISVY-NR-TTSKVDETVERAKQEGNL----------------PLYGF--HDP 60 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~---G~~V~v~-dr-~~~~~~~~~~~~~~~~~~----------------~~~~~--~s~ 60 (484)
.||||+|.|.+|..+.+.|.++ .++|... |+ +++....+.+.....|.+ .+... .++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 80 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP 80 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCCh
Confidence 3899999999999999999886 3676644 44 444444444211100000 12222 245
Q ss_pred hHH-HhhcCCCcEEEEecCCCchHHHHHHHHhhhcCCCC--EEEecCC
Q 011501 61 ESF-VHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGD--CIIDGGN 105 (484)
Q Consensus 61 ~e~-~~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~--iiId~st 105 (484)
+++ ...+ .+|+||.|+|.....+ .... +++.|. +|||.+.
T Consensus 81 ~~l~w~~~-~vDvV~~atg~~~s~e-~a~~---~l~aGakkvVId~~a 123 (332)
T 1hdg_O 81 SKLPWKDL-GVDFVIESTGVFRNRE-KAEL---HLQAGAKKVIITAPA 123 (332)
T ss_dssp GGSCHHHH-TCCEEEECSSSCCBHH-HHTH---HHHTTCSEEEESSCC
T ss_pred HHCccccc-CCCEEEECCccchhHH-HHHH---HHHcCCcEEEEeCCC
Confidence 444 1200 2899999998875433 2222 344565 8888765
No 477
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=94.19 E-value=0.12 Score=49.13 Aligned_cols=83 Identities=16% Similarity=0.190 Sum_probs=53.8
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
++|-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+... .. ...+..=+.+...
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~Dv~~~~~ 65 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYP-----------------DR---AEAISLDVTDGER 65 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCT-----------------TT---EEEEECCTTCHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc-----------------CC---ceEEEeeCCCHHH
Confidence 3455555 5899999999999999999999999887766554211 01 2222223334445
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
++.+++++.....+=+++|++...
T Consensus 66 ~~~~~~~~~~~~g~id~lv~~Ag~ 89 (281)
T 3m1a_A 66 IDVVAADVLARYGRVDVLVNNAGR 89 (281)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHhCCCCCEEEECCCc
Confidence 666666665554455778777553
No 478
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.18 E-value=0.18 Score=50.27 Aligned_cols=94 Identities=11% Similarity=0.118 Sum_probs=61.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhc-CCCcEEEEecCCCch
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSI-QKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l-~~advIi~~vp~~~~ 82 (484)
.+|.|+|+|.+|...++.+...|.+|++.++++++.+.+.+.+.. .....+.++.++.+ ...|+||-++.....
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~-----~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~ 270 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGAD-----EVVNSRNADEMAAHLKSFDFILNTVAAPHN 270 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCS-----EEEETTCHHHHHTTTTCEEEEEECCSSCCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc-----EEeccccHHHHHHhhcCCCEEEECCCCHHH
Confidence 369999999999999988888999999999999988877665432 11111212333322 347889888876544
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
++.. ...+.++-.++..+..
T Consensus 271 ~~~~----~~~l~~~G~iv~~G~~ 290 (369)
T 1uuf_A 271 LDDF----TTLLKRDGTMTLVGAP 290 (369)
T ss_dssp HHHH----HTTEEEEEEEEECCCC
T ss_pred HHHH----HHHhccCCEEEEeccC
Confidence 4433 3445555556665543
No 479
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=94.17 E-value=0.19 Score=47.32 Aligned_cols=84 Identities=11% Similarity=0.183 Sum_probs=53.0
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEe--cCCC
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIML--VKAG 80 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~--vp~~ 80 (484)
++|-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.++... .. .++.++. +.+.
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----------------~~---~~~~~~~~D~~~~ 70 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS----------------KG---FKVEASVCDLSSR 70 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----------------TT---CEEEEEECCTTCH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----------------cC---CcEEEEEcCCCCH
Confidence 3566665 58899999999999999999999998876655443211 01 2222222 2333
Q ss_pred chHHHHHHHHhhhc-CCCCEEEecCCC
Q 011501 81 SPVDQTIKTLSVYM-EKGDCIIDGGNE 106 (484)
Q Consensus 81 ~~v~~vl~~l~~~l-~~g~iiId~st~ 106 (484)
+.++.+++.+.... .+=+++|++...
T Consensus 71 ~~~~~~~~~~~~~~~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 71 SERQELMNTVANHFHGKLNILVNNAGI 97 (260)
T ss_dssp HHHHHHHHHHHHHTTTCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCCEEEECCCC
Confidence 44556666665544 344677776553
No 480
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=94.13 E-value=0.24 Score=46.63 Aligned_cols=41 Identities=12% Similarity=0.222 Sum_probs=33.6
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHH
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 44 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~ 44 (484)
+++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+.+.+
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 54 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVA 54 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 3566665 5889999999999999999999999877665543
No 481
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=94.11 E-value=0.18 Score=47.41 Aligned_cols=41 Identities=20% Similarity=0.302 Sum_probs=33.8
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHH
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 44 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~ 44 (484)
+++-|.| .|-+|..+|+.|+++|++|.+.+|++++.+++.+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAAR 49 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 3466666 5899999999999999999999999887665543
No 482
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=94.07 E-value=0.26 Score=45.97 Aligned_cols=81 Identities=12% Similarity=0.158 Sum_probs=51.9
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
+++-|.| .|-+|..+++.|++.|++|++.+|++++.+++.+.. . ...+..=+.+.+.
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------------~---~~~~~~D~~~~~~ 63 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------------------G---AHPVVMDVADPAS 63 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------------------T---CEEEECCTTCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------------------C---CEEEEecCCCHHH
Confidence 4566666 588999999999999999999999987766544311 0 1122222333345
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
++.+++++.....+=+++|++...
T Consensus 64 ~~~~~~~~~~~~g~id~lvn~Ag~ 87 (245)
T 1uls_A 64 VERGFAEALAHLGRLDGVVHYAGI 87 (245)
T ss_dssp HHHHHHHHHHHHSSCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 556666555544444777776543
No 483
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=94.07 E-value=0.043 Score=53.41 Aligned_cols=34 Identities=15% Similarity=0.435 Sum_probs=31.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCcEEEEeCCh
Q 011501 3 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTT 36 (484)
Q Consensus 3 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~ 36 (484)
+++|.|||.|..|..+|..|+++|++|+++++++
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 3589999999999999999999999999999875
No 484
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=94.04 E-value=0.15 Score=50.32 Aligned_cols=100 Identities=11% Similarity=0.104 Sum_probs=54.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhCC-CcEEEE-eC-ChhHHHHHHHHhhhcCCC---------Ce-------eec--CCHhH
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKG-FPISVY-NR-TTSKVDETVERAKQEGNL---------PL-------YGF--HDPES 62 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G-~~V~v~-dr-~~~~~~~~~~~~~~~~~~---------~~-------~~~--~s~~e 62 (484)
.||||+|.|++|..+.+.|.++. .+|... |+ +++....+.+....-+.+ .+ ... .++++
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~ 81 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPAN 81 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCChhh
Confidence 58999999999999999998875 355544 44 344333333321100000 01 111 23444
Q ss_pred HHhhcCCCcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCC
Q 011501 63 FVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEW 107 (484)
Q Consensus 63 ~~~~l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 107 (484)
+--....+|+||.|+|.....+ ... .+++.|..+||.|...
T Consensus 82 i~w~~~~vDvVf~atg~~~s~e-~a~---~~l~~GakvVdlSa~~ 122 (330)
T 1gad_O 82 LKWDEVGVDVVAEATGLFLTDE-TAR---KHITAGAKKVVMTGPS 122 (330)
T ss_dssp GCHHHHTCSEEEECSSSCCSHH-HHT---HHHHTTCSEEEESSCC
T ss_pred CccccccCCEEEECCCccccHH-HHH---HHHHCCCEEEEECCCC
Confidence 3100012888888888875433 222 2344576677776654
No 485
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=94.03 E-value=0.23 Score=47.26 Aligned_cols=82 Identities=15% Similarity=0.249 Sum_probs=53.6
Q ss_pred eEEEE-c-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 5 RIGLA-G-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 5 ~IgiI-G-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
|+.+| | .|-+|..+|+.|++.|++|.+.+|+.++.+++.+... .. ...+-.=+.+.+.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~Dv~d~~~ 88 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG-----------------DD---ALCVPTDVTDPDS 88 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT-----------------SC---CEEEECCTTSHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC-----------------CC---eEEEEecCCCHHH
Confidence 45555 5 5889999999999999999999999888776654321 01 2222222334445
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
++.+++.+.....+=+++|++...
T Consensus 89 v~~~~~~~~~~~g~iD~lVnnAg~ 112 (272)
T 4dyv_A 89 VRALFTATVEKFGRVDVLFNNAGT 112 (272)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 666666665555455777776543
No 486
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=94.02 E-value=0.23 Score=47.76 Aligned_cols=86 Identities=13% Similarity=0.082 Sum_probs=54.0
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEecCCCch
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSP 82 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~vp~~~~ 82 (484)
++|-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... -.. ...+..=+.+.+.
T Consensus 35 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--------------~~~---~~~~~~Dv~d~~~ 97 (291)
T 3cxt_A 35 KIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAA--------------GIN---AHGYVCDVTDEDG 97 (291)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--------------TCC---CEEEECCTTCHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--------------CCe---EEEEEecCCCHHH
Confidence 3466665 688999999999999999999999988766654432110 000 2222222334445
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCC
Q 011501 83 VDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 83 v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
++.+++++.....+=+++|++...
T Consensus 98 v~~~~~~~~~~~g~iD~lvnnAg~ 121 (291)
T 3cxt_A 98 IQAMVAQIESEVGIIDILVNNAGI 121 (291)
T ss_dssp HHHHHHHHHHHTCCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCcEEEECCCc
Confidence 666666666555445777776543
No 487
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=94.00 E-value=0.26 Score=51.31 Aligned_cols=109 Identities=23% Similarity=0.314 Sum_probs=64.3
Q ss_pred CeEEEEcccHHHHH-HHHHHHhCCCcEEEEeCChhHH-HHHHHHhhhcCCCCeeec--CCHhHHHhhcCCCcEEEEec--
Q 011501 4 TRIGLAGLAVMGQN-LALNIAEKGFPISVYNRTTSKV-DETVERAKQEGNLPLYGF--HDPESFVHSIQKPRVIIMLV-- 77 (484)
Q Consensus 4 ~~IgiIGlG~mG~~-lA~~L~~~G~~V~v~dr~~~~~-~~~~~~~~~~~~~~~~~~--~s~~e~~~~l~~advIi~~v-- 77 (484)
++|.|||+|..|.+ +|+.|.+.|++|+++|...... +.+.+.+ +... .+.+. ++ .+|.||+.-
T Consensus 20 ~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~g-------i~~~~g~~~~~-~~---~a~~vv~s~~i 88 (491)
T 2f00_A 20 RHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQLMNLG-------ATIYFNHRPEN-VR---DASVVVVSSAI 88 (491)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTT-------CEEESSCCGGG-GT---TCSEEEECTTC
T ss_pred CEEEEEEcCHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHCC-------CEEECCCCHHH-cC---CCCEEEECCCC
Confidence 57999999999997 9999999999999999866433 3333322 3332 23322 33 389888853
Q ss_pred CCCch-HHHH----------HHHHhhhcCCCC-EEEecCCCChHHHHHHHHHHHHcCC
Q 011501 78 KAGSP-VDQT----------IKTLSVYMEKGD-CIIDGGNEWYENTERRQKAVAELGL 123 (484)
Q Consensus 78 p~~~~-v~~v----------l~~l~~~l~~g~-iiId~st~~~~~~~~~~~~l~~~g~ 123 (484)
|.... +... .+.+...+.... |-|-.|+++-.++.-+...+...|.
T Consensus 89 ~~~~p~~~~a~~~~ipvl~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~ 146 (491)
T 2f00_A 89 SADNPEIVAAHEARIPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGL 146 (491)
T ss_dssp CTTCHHHHHHHHTTCCEEEHHHHHHHHHTTSEEEEEESSSCHHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHcCCcEEEHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHHHHhCCC
Confidence 32211 2111 122222232223 3455566665555556677777774
No 488
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=93.99 E-value=0.16 Score=47.71 Aligned_cols=40 Identities=25% Similarity=0.307 Sum_probs=32.9
Q ss_pred eEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHH
Q 011501 5 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 44 (484)
Q Consensus 5 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~ 44 (484)
+|-|.| .|-+|..+|+.|++.|++|.+.+|++++.++..+
T Consensus 16 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 56 (260)
T 2zat_A 16 VALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVA 56 (260)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 455555 6889999999999999999999999887665543
No 489
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=93.99 E-value=0.21 Score=47.90 Aligned_cols=85 Identities=15% Similarity=0.185 Sum_probs=54.7
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEe--cCCC
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIML--VKAG 80 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~--vp~~ 80 (484)
++|-|.| .|.+|..++..|++.|++|++.+|++++.+.+.+... +.. . .++.++. +.+.
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~--------------~~~-~---~~~~~~~~Dl~~~ 88 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQIS--------------SQT-G---NKVHAIQCDVRDP 88 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--------------HHH-S---SCEEEEECCTTCH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--------------Hhc-C---CceEEEEeCCCCH
Confidence 4576776 5899999999999999999999999887665544321 000 1 2233222 2333
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
+.++.+++.+.....+=++||++...
T Consensus 89 ~~~~~~~~~~~~~~g~id~li~~Ag~ 114 (302)
T 1w6u_A 89 DMVQNTVSELIKVAGHPNIVINNAAG 114 (302)
T ss_dssp HHHHHHHHHHHHHTCSCSEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 45666666665555455788887653
No 490
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.98 E-value=0.15 Score=52.46 Aligned_cols=108 Identities=20% Similarity=0.209 Sum_probs=71.9
Q ss_pred CeEEEEccc----------HHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEE
Q 011501 4 TRIGLAGLA----------VMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVI 73 (484)
Q Consensus 4 ~~IgiIGlG----------~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advI 73 (484)
++|+|+|+- .=...++..|.+.|.+|.+||+.... +....... .+..+.++.+.++. +|.|
T Consensus 319 ~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~--~~~~~~~~----~~~~~~~~~~~~~~---ad~~ 389 (450)
T 3gg2_A 319 RCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAMK--EAQKRLGD----KVEYTTDMYDAVRG---AEAL 389 (450)
T ss_dssp CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCHH--HHHHHHGG----GSEECSSHHHHTTT---CSCE
T ss_pred CEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCcH--HHHHhcCc----cceecCCHHHHhcC---CCEE
Confidence 589999985 23688999999999999999987642 22222211 25667888888877 9999
Q ss_pred EEecCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEecc
Q 011501 74 IMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMG 129 (484)
Q Consensus 74 i~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~p 129 (484)
++++..++.-.--.+.+...+ ++.+|+|+-+..... .+.|+.|.+.+
T Consensus 390 vi~t~~~~f~~~~~~~~~~~~-~~~~i~D~r~~~~~~--------~~~g~~y~~ig 436 (450)
T 3gg2_A 390 FHVTEWKEFRMPDWSALSQAM-AASLVIDGRNVYELP--------ADSDFTLLNIG 436 (450)
T ss_dssp EECSCCGGGSSCCHHHHHHHS-SSCEEEESSCCCCCC------------CEEEECC
T ss_pred EEccCCHHHhhcCHHHHHHhc-CCCEEEECCCCCChH--------HhCCCEEEEec
Confidence 999987632111123444444 367999999887543 34588887654
No 491
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=93.98 E-value=0.19 Score=47.47 Aligned_cols=85 Identities=9% Similarity=0.145 Sum_probs=53.2
Q ss_pred eEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEE--ecCCCc
Q 011501 5 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIM--LVKAGS 81 (484)
Q Consensus 5 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~--~vp~~~ 81 (484)
++-|.| .|.+|..+++.|++.|++|.+.+|++++.+++.+..... ... .++.++ =+.+.+
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--------------~~~---~~~~~~~~D~~~~~ 71 (267)
T 2gdz_A 9 VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQ--------------FEP---QKTLFIQCDVADQQ 71 (267)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT--------------SCG---GGEEEEECCTTSHH
T ss_pred EEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh--------------cCC---CceEEEecCCCCHH
Confidence 566666 589999999999999999999999988766554332110 000 122222 233334
Q ss_pred hHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 82 PVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 82 ~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
.++.+++.+.....+=+++|++...
T Consensus 72 ~v~~~~~~~~~~~g~id~lv~~Ag~ 96 (267)
T 2gdz_A 72 QLRDTFRKVVDHFGRLDILVNNAGV 96 (267)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 5566666665544445778877654
No 492
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=93.97 E-value=0.21 Score=47.74 Aligned_cols=84 Identities=12% Similarity=0.213 Sum_probs=53.7
Q ss_pred EEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCC-cEEEEecCCCchH
Q 011501 6 IGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKP-RVIIMLVKAGSPV 83 (484)
Q Consensus 6 IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~a-dvIi~~vp~~~~v 83 (484)
+-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.++... .-.. . ..+-.=+.+.+.+
T Consensus 36 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~---~~~~~~~Dv~d~~~v 98 (281)
T 4dry_A 36 ALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGG--------------RTGN---IVRAVVCDVGDPDQV 98 (281)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--------------HHSS---CEEEEECCTTCHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh--------------cCCC---eEEEEEcCCCCHHHH
Confidence 44445 58899999999999999999999999887766543211 0010 1 1222223344456
Q ss_pred HHHHHHHhhhcCCCCEEEecCCC
Q 011501 84 DQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 84 ~~vl~~l~~~l~~g~iiId~st~ 106 (484)
+.+++++.....+=+++|++...
T Consensus 99 ~~~~~~~~~~~g~iD~lvnnAG~ 121 (281)
T 4dry_A 99 AALFAAVRAEFARLDLLVNNAGS 121 (281)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 66666666655555788877654
No 493
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=93.97 E-value=0.21 Score=47.08 Aligned_cols=86 Identities=12% Similarity=0.204 Sum_probs=53.0
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEe--cCCC
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIML--VKAG 80 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~--vp~~ 80 (484)
+++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+.... .... .++.++. +.+.
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~---~~~~~~~~D~~~~ 76 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLE--------------TAPD---AEVLTTVADVSDE 76 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--------------HCTT---CCEEEEECCTTSH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--------------hcCC---ceEEEEEccCCCH
Confidence 3455665 68899999999999999999999998876665443211 0001 2233222 2333
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
+.++.+++++.....+=+++|++...
T Consensus 77 ~~v~~~~~~~~~~~g~id~lv~nAg~ 102 (267)
T 1iy8_A 77 AQVEAYVTATTERFGRIDGFFNNAGI 102 (267)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 44556666655544444777776543
No 494
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=93.96 E-value=0.25 Score=51.14 Aligned_cols=111 Identities=17% Similarity=0.233 Sum_probs=64.1
Q ss_pred CeEEEEcccHHHHH-HHHHHHhCCCcEEEEeCChhHH-HHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEe--cCC
Q 011501 4 TRIGLAGLAVMGQN-LALNIAEKGFPISVYNRTTSKV-DETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIML--VKA 79 (484)
Q Consensus 4 ~~IgiIGlG~mG~~-lA~~L~~~G~~V~v~dr~~~~~-~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~--vp~ 79 (484)
++|.|||+|..|.+ +|+.|.+.|++|+++|...... +.+.+.+. .+..-.+.+ .++ .+|.||.. +|.
T Consensus 19 ~~i~viG~G~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi-----~~~~g~~~~-~~~---~a~~vv~s~~i~~ 89 (475)
T 1p3d_A 19 QQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGA-----KIYIGHAEE-HIE---GASVVVVSSAIKD 89 (475)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTC-----EEEESCCGG-GGT---TCSEEEECTTSCT
T ss_pred CEEEEEeecHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHhCCC-----EEECCCCHH-HcC---CCCEEEECCCCCC
Confidence 57999999999997 9999999999999999876433 33333221 121112333 233 38988885 232
Q ss_pred Cch-HHHH----------HHHHhhhcCCC-CEEEecCCCChHHHHHHHHHHHHcCC
Q 011501 80 GSP-VDQT----------IKTLSVYMEKG-DCIIDGGNEWYENTERRQKAVAELGL 123 (484)
Q Consensus 80 ~~~-v~~v----------l~~l~~~l~~g-~iiId~st~~~~~~~~~~~~l~~~g~ 123 (484)
... +... .+.+...+... -|-|-.|+++-.++.-+...+...|.
T Consensus 90 ~~~~~~~a~~~~i~vl~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~ 145 (475)
T 1p3d_A 90 DNPELVTSKQKRIPVIQRAQMLAEIMRFRHGIAVAGTHGKTTTTAMISMIYTQAKL 145 (475)
T ss_dssp TCHHHHHHHHTTCCEEEHHHHHHHHHHTSEEEEEESSSCHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHcCCcEEEHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhCCC
Confidence 211 2111 11222222222 34455666665555556777777774
No 495
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.96 E-value=0.077 Score=52.24 Aligned_cols=43 Identities=9% Similarity=0.186 Sum_probs=37.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHh
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERA 46 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~ 46 (484)
.+|.|+|+|.+|...++.+...|.+|++.++++++.+.+.+.+
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lG 210 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLG 210 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcC
Confidence 3689999999999999988889999999999999887766544
No 496
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=93.95 E-value=0.18 Score=47.54 Aligned_cols=84 Identities=15% Similarity=0.182 Sum_probs=53.5
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEE--ecCCC
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIM--LVKAG 80 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~--~vp~~ 80 (484)
+++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.++ =+.+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~D~~~~ 68 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK----------------G---VEARSYVCDVTSE 68 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----------------T---SCEEEEECCTTCH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------C---CcEEEEEecCCCH
Confidence 3566665 588999999999999999999999988776654432110 0 222222 22333
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
+.++.+++.+.....+=+++|++...
T Consensus 69 ~~~~~~~~~~~~~~g~id~lv~nAg~ 94 (262)
T 1zem_A 69 EAVIGTVDSVVRDFGKIDFLFNNAGY 94 (262)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 45556666665544444777776543
No 497
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=93.95 E-value=0.066 Score=54.42 Aligned_cols=115 Identities=10% Similarity=0.155 Sum_probs=71.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCcEE-EEeC----------ChhHHHHHHHHhhh--cCCC-Ce---eecCCHhHHHhh
Q 011501 4 TRIGLAGLAVMGQNLALNIAEKGFPIS-VYNR----------TTSKVDETVERAKQ--EGNL-PL---YGFHDPESFVHS 66 (484)
Q Consensus 4 ~~IgiIGlG~mG~~lA~~L~~~G~~V~-v~dr----------~~~~~~~~~~~~~~--~~~~-~~---~~~~s~~e~~~~ 66 (484)
++|.|.|.|+||...+..|.+.|.+|. +.|. +.+.+.++.+.... -.++ .. ....+.+++...
T Consensus 211 k~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~~~~~~~ 290 (421)
T 1v9l_A 211 KTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNPDAIFKL 290 (421)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSSTTGGGGC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCchhhhcC
Confidence 589999999999999999999999877 6676 45555443322110 0000 00 111134555442
Q ss_pred cCCCcEEEEecCCCchHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEe
Q 011501 67 IQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLG 127 (484)
Q Consensus 67 l~~advIi~~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~ 127 (484)
.||+++-|-.... +. ..-.+.+ .=++|+...|... |.+..+.+.++|+.|+.
T Consensus 291 --~~Dil~P~A~~~~-I~---~~~a~~l-~ak~V~EgAN~p~--t~~a~~~l~~~Gi~~~P 342 (421)
T 1v9l_A 291 --DVDIFVPAAIENV-IR---GDNAGLV-KARLVVEGANGPT--TPEAERILYERGVVVVP 342 (421)
T ss_dssp --CCSEEEECSCSSC-BC---TTTTTTC-CCSEEECCSSSCB--CHHHHHHHHTTTCEEEC
T ss_pred --CccEEEecCcCCc-cc---hhhHHHc-CceEEEecCCCcC--CHHHHHHHHHCCCEEeC
Confidence 4899988764442 21 1122334 3478888888763 45666788999998874
No 498
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=93.95 E-value=0.21 Score=46.36 Aligned_cols=41 Identities=15% Similarity=0.208 Sum_probs=34.5
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHH
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 44 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~~~~ 44 (484)
+++-|.| .|.+|..++..|++.|++|.+.+|++++.+++.+
T Consensus 3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 44 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETAR 44 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 4566776 5899999999999999999999999887766544
No 499
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=93.94 E-value=0.2 Score=46.68 Aligned_cols=84 Identities=18% Similarity=0.270 Sum_probs=52.7
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCcEEEEeC-ChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEEEe--cCC
Q 011501 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNR-TTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIML--VKA 79 (484)
Q Consensus 4 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr-~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi~~--vp~ 79 (484)
+++-|.| .|-+|..+|+.|++.|++|.+.+| ++++.+++.++... .. .++.++. +.+
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~---~~~~~~~~D~~~ 65 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKK----------------LG---SDAIAVRADVAN 65 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH----------------TT---CCEEEEECCTTC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh----------------cC---CcEEEEEcCCCC
Confidence 4455555 688999999999999999999999 77766655432211 01 2232222 233
Q ss_pred CchHHHHHHHHhhhcCCCCEEEecCCC
Q 011501 80 GSPVDQTIKTLSVYMEKGDCIIDGGNE 106 (484)
Q Consensus 80 ~~~v~~vl~~l~~~l~~g~iiId~st~ 106 (484)
.+.++.+++++.....+=+++|++...
T Consensus 66 ~~~~~~~~~~~~~~~g~id~lv~nAg~ 92 (246)
T 2uvd_A 66 AEDVTNMVKQTVDVFGQVDILVNNAGV 92 (246)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 345666666665544445777776554
No 500
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=93.93 E-value=0.24 Score=45.90 Aligned_cols=95 Identities=16% Similarity=0.219 Sum_probs=59.6
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCcEE-EEeCChhHHHHHHHHhhhcCCCCeeecCCHhHHHhhcCCCcEEE-EecCCC
Q 011501 4 TRIGLAGL-AVMGQNLALNIAEKGFPIS-VYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVII-MLVKAG 80 (484)
Q Consensus 4 ~~IgiIGl-G~mG~~lA~~L~~~G~~V~-v~dr~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~advIi-~~vp~~ 80 (484)
||.+|+|+ |.||+.++......|+++. .+|++.+ . ++ +. +|++| ++.|.
T Consensus 13 ~~~~v~Ga~GrMG~~i~~~~~~~~~elv~~id~~~~----------~----------~l----~~---~DVvIDFT~P~- 64 (228)
T 1vm6_A 13 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV----------E----------EL----DS---PDVVIDFSSPE- 64 (228)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE----------E----------EC----SC---CSEEEECSCGG-
T ss_pred ceeEEEEecCHHHHHHHHHHhCCCCEEEEEEcCCCc----------c----------cc----cC---CCEEEECCCHH-
Confidence 68999997 9999999887767788754 5676531 0 11 13 89888 66655
Q ss_pred chHHHHHHHHhhhcCCCCEEEecCCCChHHHHHHHHHHHHcCCeEEeccCC
Q 011501 81 SPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVS 131 (484)
Q Consensus 81 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~i~~pv~ 131 (484)
.+.+.++... ..|.-+|.++|.....-.+..+.+.++ +..+-+|-+
T Consensus 65 -a~~~~~~~~~---~~g~~~ViGTTG~~~~~~~~l~~~a~~-~~vv~apNf 110 (228)
T 1vm6_A 65 -ALPKTVDLCK---KYRAGLVLGTTALKEEHLQMLRELSKE-VPVVQAYNF 110 (228)
T ss_dssp -GHHHHHHHHH---HHTCEEEECCCSCCHHHHHHHHHHTTT-SEEEECSCC
T ss_pred -HHHHHHHHHH---HcCCCEEEeCCCCCHHHHHHHHHHHhh-CCEEEeccc
Confidence 4555444433 346677777777655444444444444 556656643
Done!