Query 011502
Match_columns 484
No_of_seqs 57 out of 59
Neff 2.7
Searched_HMMs 13730
Date Mon Mar 25 09:28:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011502.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/011502hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xbla_ a.2.3.1 (A:) DnaJ chap 99.0 1.2E-10 9E-15 90.4 3.6 35 440-476 3-37 (75)
2 d1gh6a_ a.2.3.1 (A:) Large T a 98.9 1.6E-10 1.2E-14 95.4 3.0 38 439-476 7-44 (114)
3 d1wjza_ a.2.3.1 (A:) CSL-type 98.9 2.4E-10 1.8E-14 92.3 3.3 36 440-477 16-51 (94)
4 d1hdja_ a.2.3.1 (A:) HSP40 {Hu 98.8 7.3E-10 5.3E-14 86.0 3.6 37 439-477 2-38 (77)
5 d1fpoa1 a.2.3.1 (A:1-76) HSC20 98.7 3.1E-09 2.3E-13 81.9 3.1 37 440-476 1-37 (76)
6 d1fafa_ a.2.3.1 (A:) Large T a 98.7 3.7E-09 2.7E-13 83.9 2.9 36 440-475 11-46 (79)
7 d1iura_ a.2.3.1 (A:) Hypotheti 98.5 1.1E-08 7.9E-13 82.5 1.7 35 440-476 16-50 (88)
8 d1nz6a_ a.2.3.1 (A:) Auxilin J 98.2 8.1E-08 5.9E-12 78.2 0.9 35 440-476 33-67 (98)
9 d1x4ga1 d.58.7.1 (A:8-103) Nuc 46.7 4.5 0.00033 30.4 2.2 35 446-482 24-62 (96)
10 d2cpja1 d.58.7.1 (A:65-150) No 31.6 8.8 0.00064 28.0 1.6 36 445-482 13-52 (86)
11 d2uuia1 f.56.1.1 (A:2-147) Leu 30.7 1.3E+02 0.0094 24.4 9.6 53 231-286 45-97 (146)
12 d1whya_ d.58.7.1 (A:) Putative 25.1 20 0.0015 26.4 2.6 34 447-482 24-61 (97)
13 d1wexa_ d.58.7.1 (A:) Heteroge 24.9 15 0.0011 27.4 1.9 34 447-482 22-59 (104)
14 d1a8ya2 c.47.1.3 (A:127-228) C 24.6 21 0.0016 27.7 2.8 50 426-478 3-52 (102)
No 1
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Probab=98.97 E-value=1.2e-10 Score=90.38 Aligned_cols=35 Identities=17% Similarity=0.263 Sum_probs=33.2
Q ss_pred ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502 440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF 476 (484)
Q Consensus 440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~ 476 (484)
.|||+||||++. ++.++||++|||++++.|||||-
T Consensus 3 ~dyY~vLgv~~~--As~~eIk~aYr~l~~~~HPDk~~ 37 (75)
T d1xbla_ 3 QDYYEILGVSKT--AEEREIRKAYKRLAMKYHPDRNQ 37 (75)
T ss_dssp CCTTTTTCCSSS--CCHHHHHHHHHHHHHHTCCTTCT
T ss_pred CCHHHHcCCCCC--cCHHHHHHHHHHHHhhhhhhccC
Confidence 699999999995 99999999999999999999974
No 2
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}
Probab=98.92 E-value=1.6e-10 Score=95.44 Aligned_cols=38 Identities=18% Similarity=0.153 Sum_probs=34.1
Q ss_pred cccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502 439 CTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF 476 (484)
Q Consensus 439 c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~ 476 (484)
..|||+||||+++-..|.++|||+|||+|++.|||||-
T Consensus 7 ~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~ 44 (114)
T d1gh6a_ 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGG 44 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchh
Confidence 47999999999974458889999999999999999984
No 3
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.90 E-value=2.4e-10 Score=92.35 Aligned_cols=36 Identities=31% Similarity=0.299 Sum_probs=33.8
Q ss_pred ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCcccc
Q 011502 440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCFA 477 (484)
Q Consensus 440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~~ 477 (484)
.|||+||||+|. ++.++||++|||+++++|||||..
T Consensus 16 ~d~Y~iLgv~~~--as~~eIk~aY~~l~~~~HPDk~~~ 51 (94)
T d1wjza_ 16 KDWYSILGADPS--ANMSDLKQKYQKLILLYHPDKQSA 51 (94)
T ss_dssp SCHHHHTTCCTT--CCHHHHHHHHHHTTSSSCSTTCCT
T ss_pred cChHHHcCCCCC--cCHHHHHHHHHHHHHHhhhhhccc
Confidence 599999999995 999999999999999999999864
No 4
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.83 E-value=7.3e-10 Score=86.02 Aligned_cols=37 Identities=27% Similarity=0.282 Sum_probs=34.1
Q ss_pred cccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCcccc
Q 011502 439 CTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCFA 477 (484)
Q Consensus 439 c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~~ 477 (484)
.+|||+||||+++ ++.++||++|||++++.|||++-.
T Consensus 2 ~kdyY~iLgv~~~--as~~eIk~ay~~l~~~~hPD~~~~ 38 (77)
T d1hdja_ 2 GKDYYQTLGLARG--ASDEEIKRAYRRQALRYHPDKNKE 38 (77)
T ss_dssp CCCSHHHHTCCTT--CCHHHHHHHHHHHHHTTCTTTCCC
T ss_pred CCChHHHcCCCCC--cCHHHHHHHHHHHHHHhccccccc
Confidence 3799999999995 999999999999999999999753
No 5
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Probab=98.69 E-value=3.1e-09 Score=81.85 Aligned_cols=37 Identities=14% Similarity=0.104 Sum_probs=34.0
Q ss_pred ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502 440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF 476 (484)
Q Consensus 440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~ 476 (484)
.|||++|||++.-.+|.++||++||+++.+.|||++-
T Consensus 1 lnyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~ 37 (76)
T d1fpoa1 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFA 37 (76)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGT
T ss_pred CChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccc
Confidence 4899999999976688999999999999999999964
No 6
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}
Probab=98.66 E-value=3.7e-09 Score=83.94 Aligned_cols=36 Identities=17% Similarity=0.088 Sum_probs=33.4
Q ss_pred ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCcc
Q 011502 440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCC 475 (484)
Q Consensus 440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~ 475 (484)
.+||+||||++....|.++|||+|||+|++.||||+
T Consensus 11 ~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~ 46 (79)
T d1fafa_ 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG 46 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGS
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccC
Confidence 689999999997556999999999999999999996
No 7
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.51 E-value=1.1e-08 Score=82.52 Aligned_cols=35 Identities=11% Similarity=-0.166 Sum_probs=33.1
Q ss_pred ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502 440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF 476 (484)
Q Consensus 440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~ 476 (484)
.|+|+|||++++ ++.++|||+||++|++.||||+-
T Consensus 16 ~~~y~iL~v~~~--as~~eIKkAYrrl~~~~HPDk~~ 50 (88)
T d1iura_ 16 KEVTSVVEQAWK--LPESERKKIIRRLYLKWHPDKNP 50 (88)
T ss_dssp HHHHHHHHHTTS--SCSHHHHHHHHHHHHHTCTTTSS
T ss_pred HHHHHHhCCCCC--CCHHHHHHHHHHHHHHhcccccc
Confidence 699999999996 99999999999999999999974
No 8
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.25 E-value=8.1e-08 Score=78.18 Aligned_cols=35 Identities=20% Similarity=0.333 Sum_probs=32.6
Q ss_pred ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502 440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF 476 (484)
Q Consensus 440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~ 476 (484)
.++|++||+++. +++++||++|||+++++||||+-
T Consensus 33 ~~~y~~Lgl~~~--~t~~eIk~aYr~l~~~~HPDk~~ 67 (98)
T d1nz6a_ 33 ETKWKPVGMADL--VTPEQVKKVYRKAVLVVHPDKAT 67 (98)
T ss_dssp CCSCCCCCGGGC--CSHHHHHHHHHHHHHHSCHHHHT
T ss_pred ccCCeecCCCcc--CCHHHHHHHHHHHHHHhccccCC
Confidence 479999999996 99999999999999999999975
No 9
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.68 E-value=4.5 Score=30.36 Aligned_cols=35 Identities=3% Similarity=0.081 Sum_probs=26.9
Q ss_pred cCcCCCCCCChHHHHHHHhh----hhhhcCCCccccccccC
Q 011502 446 LGLSRFENVDVSILKREYRK----KVCCLNHFCCFAYFEHD 482 (484)
Q Consensus 446 LGv~r~~~id~s~LKKeYRK----kALlvHPdk~~~~~~~~ 482 (484)
=||++. +++++|++.+.+ ....++|||+|||.+-+
T Consensus 24 ~nL~~~--~te~~L~~~F~~fG~i~~v~i~~~kg~afV~f~ 62 (96)
T d1x4ga1 24 GGIASG--LTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFS 62 (96)
T ss_dssp ECCSSC--CCHHHHHHHHHHHSCEEEEEEETTTTEEEEEES
T ss_pred cCCCCC--CCHHHHHHHHHHhCCceEEEEEecceEEEEEEC
Confidence 366664 899999998887 45678899999887644
No 10
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.57 E-value=8.8 Score=28.01 Aligned_cols=36 Identities=8% Similarity=0.124 Sum_probs=25.8
Q ss_pred hcCcCCCCCCChHHHHHHHhhh----hhhcCCCccccccccC
Q 011502 445 ALGLSRFENVDVSILKREYRKK----VCCLNHFCCFAYFEHD 482 (484)
Q Consensus 445 vLGv~r~~~id~s~LKKeYRKk----ALlvHPdk~~~~~~~~ 482 (484)
|-+|+++ +++++|++.+.+- ...+++|+.|||.+-+
T Consensus 13 V~nLp~~--~~~~~l~~~F~~~G~i~~i~~~~~k~~afV~f~ 52 (86)
T d2cpja1 13 VGNLPPD--ITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLE 52 (86)
T ss_dssp EESCCTT--CCHHHHHHHTSTTCCCSEEEEETTTTEEEEECS
T ss_pred EECCCCC--CCHHHHHHHHHHhCCceEeeeecccceEEEEEC
Confidence 5577774 8888888877763 4566788888887654
No 11
>d2uuia1 f.56.1.1 (A:2-147) Leukotriene C4 synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.68 E-value=1.3e+02 Score=24.36 Aligned_cols=53 Identities=13% Similarity=0.231 Sum_probs=36.0
Q ss_pred hhhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 011502 231 LDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFA 286 (484)
Q Consensus 231 ~DC~iRGfdSf~rlGtas~f~ImWc~flS~tSm~c~~y~Ll~lg~Aa~vv~flG~t 286 (484)
++|+.|.=+-++.-=|. |+..||++-+.. +...+ -++-.+=+.|=+.++.||.
T Consensus 45 fera~RaH~N~~E~~P~-fL~ll~l~~l~~-~~~~a-~~lG~~~~vgRi~ha~gy~ 97 (146)
T d2uuia1 45 FERVYRAQVNCSEYFPL-FLATLWVAGIFF-HEGAA-ALCGLVYLFARLRYFQGYA 97 (146)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHHHHHHHT-CHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHhhHHH-HHHHHHHHHhcc-CHHHH-HHHHHHHHHHHHHHHHhhh
Confidence 78999999988886544 677789887754 33322 3344444566678888885
No 12
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.06 E-value=20 Score=26.35 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=18.1
Q ss_pred CcCCCCCCChHHHHHHHhhh----hhhcCCCccccccccC
Q 011502 447 GLSRFENVDVSILKREYRKK----VCCLNHFCCFAYFEHD 482 (484)
Q Consensus 447 Gv~r~~~id~s~LKKeYRKk----ALlvHPdk~~~~~~~~ 482 (484)
||+++ +++++|+..+.+- ...+.++++|||.|-+
T Consensus 24 nLp~~--~t~~~l~~~f~~~G~i~~~~~~~~~~~afV~f~ 61 (97)
T d1whya_ 24 GLGPN--TSLAALAREFDRFGSIRTIDHVKGDSFAYIQYE 61 (97)
T ss_dssp CCCSS--CCHHHHHHHHHTTSCEEEEEECSSSCCEEEEES
T ss_pred CCCCC--CCHHHHHHHHHhhcccceEeeeccccEEEeccC
Confidence 44443 5555555555442 3345566777766543
No 13
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.86 E-value=15 Score=27.41 Aligned_cols=34 Identities=24% Similarity=0.128 Sum_probs=21.8
Q ss_pred CcCCCCCCChHHHHHHHhhh----hhhcCCCccccccccC
Q 011502 447 GLSRFENVDVSILKREYRKK----VCCLNHFCCFAYFEHD 482 (484)
Q Consensus 447 Gv~r~~~id~s~LKKeYRKk----ALlvHPdk~~~~~~~~ 482 (484)
+|++. +++++|+..+.+- -..+.|+|++||.|-+
T Consensus 22 nlp~~--~te~~l~~~F~~fG~I~~~~~~~~k~~AfV~f~ 59 (104)
T d1wexa_ 22 GLCES--VVEADLVEALEKFGTICYVMMMPFKRQALVEFE 59 (104)
T ss_dssp SCCSS--CCHHHHHHHHTTTSCEEEEEEETTTTEEEEEES
T ss_pred CCCCC--CCHHHHHHhhhhcccceEEEEEecceeEEEEeC
Confidence 55553 6777777776652 3445678888887654
No 14
>d1a8ya2 c.47.1.3 (A:127-228) Calsequestrin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=24.56 E-value=21 Score=27.67 Aligned_cols=50 Identities=14% Similarity=0.148 Sum_probs=42.5
Q ss_pred CCCcHHHHHHHhccccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccccc
Q 011502 426 EMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCFAY 478 (484)
Q Consensus 426 e~ts~dEV~RIl~c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~~~ 478 (484)
.+++++|++..++-.|-=.|+|+=+. .++...++|.+.|..+|+|..|++
T Consensus 3 ~i~~~~e~~~F~~~~d~v~VvGfF~~---~~~~~~~~F~~~A~~~rd~~~F~~ 52 (102)
T d1a8ya2 3 LIEGERELQAFENIEDEIKLIGYFKN---KDSEHYKAFKEAAEEFHPYIPFFA 52 (102)
T ss_dssp EECSHHHHHHHTTCCSSCEEEEECSS---TTCHHHHHHHHHHHHHTTTSCEEE
T ss_pred eecCHHHHHHHhccCCCEEEEEEECC---CCcHHHHHHHHHHHHcCCCceEEE
Confidence 46788999999998888899997653 256789999999999999999875
Done!